locus-tag class description CJ259_RS00005 PF00308 Bacterial dnaA protein CJ259_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CJ259_RS00005 PF11638 DnaA N-terminal domain CJ259_RS00010 PF02767 DNA polymerase III beta subunit, central domain CJ259_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CJ259_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CJ259_RS00015 PF02463 RecF/RecN/SMC N terminal domain CJ259_RS00020 PF00204 DNA gyrase B CJ259_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus CJ259_RS00020 PF18053 DNA gyrase B subunit insert domain CJ259_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS00020 PF01751 Toprim domain CJ259_RS00040 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS00040 PF07729 FCD domain CJ259_RS00045 PF05035 2-keto-3-deoxy-galactonokinase CJ259_RS00050 PF01081 KDPG and KHG aldolase CJ259_RS00055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJ259_RS00055 PF13378 Enolase C-terminal domain-like CJ259_RS00060 PF07690 Major Facilitator Superfamily CJ259_RS00065 PF07676 WD40-like Beta Propeller Repeat CJ259_RS00065 PF12566 Protein of unknown function (DUF3748) CJ259_RS00070 PF07119 Protein of unknown function (DUF1375) CJ259_RS00075 PF00011 Hsp20/alpha crystallin family CJ259_RS00080 PF00011 Hsp20/alpha crystallin family CJ259_RS00090 PF06826 Predicted Permease Membrane Region CJ259_RS00090 PF02080 TrkA-C domain CJ259_RS00095 PF07702 UTRA domain CJ259_RS00095 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS00100 PF02378 Phosphotransferase system, EIIC CJ259_RS00100 PF00367 phosphotransferase system, EIIB CJ259_RS00105 PF02056 Family 4 glycosyl hydrolase CJ259_RS00105 PF11975 Family 4 glycosyl hydrolase C-terminal domain CJ259_RS00110 PF02656 Domain of unknown function (DUF202) CJ259_RS00115 PF02656 Domain of unknown function (DUF202) CJ259_RS00125 PF00291 Pyridoxal-phosphate dependent enzyme CJ259_RS00130 PF02447 GntP family permease CJ259_RS00135 PF03466 LysR substrate binding domain CJ259_RS00135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS00140 PF07690 Major Facilitator Superfamily CJ259_RS00165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJ259_RS00165 PF00205 Thiamine pyrophosphate enzyme, central domain CJ259_RS00165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJ259_RS00170 PF01842 ACT domain CJ259_RS00175 PF00196 Bacterial regulatory proteins, luxR family CJ259_RS00175 PF00072 Response regulator receiver domain CJ259_RS00180 PF07730 Histidine kinase CJ259_RS00180 PF05231 MASE1 CJ259_RS00180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS00185 PF07690 Major Facilitator Superfamily CJ259_RS00190 PF07690 Major Facilitator Superfamily CJ259_RS00195 PF06711 Protein of unknown function (DUF1198) CJ259_RS00210 PF07690 Major Facilitator Superfamily CJ259_RS00220 PF00266 Aminotransferase class-V CJ259_RS00230 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS00230 PF07702 UTRA domain CJ259_RS00235 PF01547 Bacterial extracellular solute-binding protein CJ259_RS00240 PF08402 TOBE domain CJ259_RS00240 PF00005 ABC transporter CJ259_RS00245 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS00250 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS00255 PF02264 LamB porin CJ259_RS00260 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CJ259_RS00265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJ259_RS00265 PF02378 Phosphotransferase system, EIIC CJ259_RS00270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJ259_RS00275 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS00280 PF07690 Major Facilitator Superfamily CJ259_RS00285 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CJ259_RS00285 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit CJ259_RS00290 PF03466 LysR substrate binding domain CJ259_RS00290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS00295 PF02585 GlcNAc-PI de-N-acetylase CJ259_RS00300 PF03737 Aldolase/RraA CJ259_RS00305 PF04303 PrpF protein CJ259_RS00320 PF00892 EamA-like transporter family CJ259_RS00325 PF02378 Phosphotransferase system, EIIC CJ259_RS00325 PF00367 phosphotransferase system, EIIB CJ259_RS00330 PF13580 SIS domain CJ259_RS00335 PF07690 Major Facilitator Superfamily CJ259_RS00340 PF02321 Outer membrane efflux protein CJ259_RS00345 PF00873 AcrB/AcrD/AcrF family CJ259_RS00350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJ259_RS00350 PF00529 HlyD membrane-fusion protein of T1SS CJ259_RS00360 PF00583 Acetyltransferase (GNAT) family CJ259_RS00375 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS00380 PF07690 Major Facilitator Superfamily CJ259_RS00385 PF03466 LysR substrate binding domain CJ259_RS00385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS00410 PF03180 NLPA lipoprotein CJ259_RS00420 PF00293 NUDIX domain CJ259_RS00425 PF12706 Beta-lactamase superfamily domain CJ259_RS00430 PF01965 DJ-1/PfpI family CJ259_RS00435 PF00107 Zinc-binding dehydrogenase CJ259_RS00435 PF08240 Alcohol dehydrogenase GroES-like domain CJ259_RS00450 PF00107 Zinc-binding dehydrogenase CJ259_RS00450 PF08240 Alcohol dehydrogenase GroES-like domain CJ259_RS00475 PF13802 Galactose mutarotase-like CJ259_RS00475 PF01055 Glycosyl hydrolases family 31 CJ259_RS00485 PF11975 Family 4 glycosyl hydrolase C-terminal domain CJ259_RS00485 PF02056 Family 4 glycosyl hydrolase CJ259_RS00490 PF00367 phosphotransferase system, EIIB CJ259_RS00490 PF02378 Phosphotransferase system, EIIC CJ259_RS00495 PF05170 AsmA family CJ259_RS00500 PF00860 Permease family CJ259_RS00505 PF03616 Sodium/glutamate symporter CJ259_RS00510 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJ259_RS00510 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJ259_RS00515 PF00230 Major intrinsic protein CJ259_RS00520 PF06005 Cell division protein ZapB CJ259_RS00530 PF02611 CDP-diacylglycerol pyrophosphatase CJ259_RS00540 PF00121 Triosephosphate isomerase CJ259_RS00545 PF07305 Protein of unknown function (DUF1454) CJ259_RS00550 PF05656 Protein of unknown function (DUF805) CJ259_RS00555 PF00970 Oxidoreductase FAD-binding domain CJ259_RS00555 PF00175 Oxidoreductase NAD-binding domain CJ259_RS00560 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CJ259_RS00565 PF17191 RecG wedge domain CJ259_RS00565 PF00271 Helicase conserved C-terminal domain CJ259_RS00565 PF00270 DEAD/DEAH box helicase CJ259_RS00570 PF00588 SpoU rRNA Methylase family CJ259_RS00570 PF12105 SpoU, rRNA methylase, C-terminal CJ259_RS00575 PF04607 Region found in RelA / SpoT proteins CJ259_RS00575 PF13291 ACT domain CJ259_RS00575 PF02824 TGS domain CJ259_RS00580 PF01192 RNA polymerase Rpb6 CJ259_RS00585 PF00625 Guanylate kinase CJ259_RS00590 PF01653 NAD-dependent DNA ligase adenylation domain CJ259_RS00590 PF03120 NAD-dependent DNA ligase OB-fold domain CJ259_RS00595 PF03458 UPF0126 domain CJ259_RS00605 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CJ259_RS00605 PF12833 Helix-turn-helix domain CJ259_RS00605 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJ259_RS00605 PF02805 Metal binding domain of Ada CJ259_RS00615 PF13610 DDE domain CJ259_RS00625 PF03755 YicC-like family, N-terminal region CJ259_RS00625 PF08340 Domain of unknown function (DUF1732) CJ259_RS00645 PF00005 ABC transporter CJ259_RS00655 PF03725 3' exoribonuclease family, domain 2 CJ259_RS00655 PF01138 3' exoribonuclease family, domain 1 CJ259_RS00660 PF00156 Phosphoribosyl transferase domain CJ259_RS00665 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS00670 PF00692 dUTPase CJ259_RS00675 PF04127 DNA / pantothenate metabolism flavoprotein CJ259_RS00675 PF02441 Flavoprotein CJ259_RS00680 PF04002 RadC-like JAB domain CJ259_RS00685 PF00830 Ribosomal L28 family CJ259_RS00690 PF00471 Ribosomal protein L33 CJ259_RS00695 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CJ259_RS00695 PF06827 Zinc finger found in FPG and IleRS CJ259_RS00695 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CJ259_RS00700 PF01467 Cytidylyltransferase-like CJ259_RS00705 PF00535 Glycosyl transferase family 2 CJ259_RS00710 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CJ259_RS00715 PF00535 Glycosyl transferase family 2 CJ259_RS00720 PF00534 Glycosyl transferases group 1 CJ259_RS00720 PF13439 Glycosyltransferase Family 4 CJ259_RS00725 PF13439 Glycosyltransferase Family 4 CJ259_RS00725 PF00534 Glycosyl transferases group 1 CJ259_RS00730 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CJ259_RS00745 PF04932 O-Antigen ligase CJ259_RS00755 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CJ259_RS00760 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CJ259_RS00765 PF01370 NAD dependent epimerase/dehydratase family CJ259_RS00770 PF00155 Aminotransferase class I and II CJ259_RS00775 PF00107 Zinc-binding dehydrogenase CJ259_RS00775 PF08240 Alcohol dehydrogenase GroES-like domain CJ259_RS00780 PF00535 Glycosyl transferase family 2 CJ259_RS00785 PF04748 Divergent polysaccharide deacetylase CJ259_RS00790 PF01551 Peptidase family M23 CJ259_RS00795 PF01676 Metalloenzyme superfamily CJ259_RS00795 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CJ259_RS00800 PF00581 Rhodanese-like domain CJ259_RS00805 PF00462 Glutaredoxin CJ259_RS00810 PF02556 Preprotein translocase subunit SecB CJ259_RS00815 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CJ259_RS00815 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CJ259_RS00820 PF06426 Serine acetyltransferase, N-terminal CJ259_RS00820 PF00132 Bacterial transferase hexapeptide (six repeats) CJ259_RS00825 PF00588 SpoU rRNA Methylase family CJ259_RS00830 PF01070 FMN-dependent dehydrogenase CJ259_RS00835 PF07729 FCD domain CJ259_RS00835 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS00840 PF02652 L-lactate permease CJ259_RS00845 PF10928 Protein of unknown function (DUF2810) CJ259_RS00855 PF05068 Mannitol repressor CJ259_RS00860 PF01232 Mannitol dehydrogenase Rossmann domain CJ259_RS00860 PF08125 Mannitol dehydrogenase C-terminal domain CJ259_RS00865 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJ259_RS00865 PF02378 Phosphotransferase system, EIIC CJ259_RS00865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJ259_RS00870 PF11742 Protein of unknown function (DUF3302) CJ259_RS00875 PF00529 HlyD membrane-fusion protein of T1SS CJ259_RS00875 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJ259_RS00880 PF00043 Glutathione S-transferase, C-terminal domain CJ259_RS00880 PF13417 Glutathione S-transferase, N-terminal domain CJ259_RS00885 PF03841 L-seryl-tRNA selenium transferase CJ259_RS00885 PF12390 Selenocysteine synthase N terminal CJ259_RS00890 PF00009 Elongation factor Tu GTP binding domain CJ259_RS00890 PF09107 Elongation factor SelB, winged helix CJ259_RS00890 PF09106 Elongation factor SelB, winged helix CJ259_RS00890 PF03144 Elongation factor Tu domain 2 CJ259_RS00895 PF09339 IclR helix-turn-helix domain CJ259_RS00895 PF01614 Bacterial transcriptional regulator CJ259_RS00900 PF13247 4Fe-4S dicluster domain CJ259_RS00900 PF12800 4Fe-4S binding domain CJ259_RS00905 PF00155 Aminotransferase class I and II CJ259_RS00910 PF00128 Alpha amylase, catalytic domain CJ259_RS00920 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CJ259_RS00925 PF12833 Helix-turn-helix domain CJ259_RS00930 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS00935 PF00005 ABC transporter CJ259_RS00940 PF13407 Periplasmic binding protein domain CJ259_RS00955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJ259_RS00955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJ259_RS00960 PF05360 yiaA/B two helix domain CJ259_RS00965 PF05360 yiaA/B two helix domain CJ259_RS00970 PF01757 Acyltransferase family CJ259_RS00975 PF13983 YsaB-like lipoprotein CJ259_RS00985 PF02091 Glycyl-tRNA synthetase alpha subunit CJ259_RS00990 PF05746 DALR anticodon binding domain CJ259_RS00990 PF02092 Glycyl-tRNA synthetase beta subunit CJ259_RS00995 PF01848 Hok/gef family CJ259_RS01000 PF00005 ABC transporter CJ259_RS01000 PF12848 ABC transporter CJ259_RS01005 PF00313 'Cold-shock' DNA-binding domain CJ259_RS01010 PF01381 Helix-turn-helix CJ259_RS01015 PF07690 Major Facilitator Superfamily CJ259_RS01025 PF11254 Protein of unknown function (DUF3053) CJ259_RS01030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJ259_RS01030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJ259_RS01035 PF07690 Major Facilitator Superfamily CJ259_RS01040 PF00294 pfkB family carbohydrate kinase CJ259_RS01050 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS01055 PF13488 Glycine zipper CJ259_RS01055 PF00691 OmpA family CJ259_RS01060 PF01568 Molydopterin dinucleotide binding domain CJ259_RS01060 PF18364 Molybdopterin oxidoreductase N-terminal domain CJ259_RS01060 PF00384 Molybdopterin oxidoreductase CJ259_RS01065 PF00583 Acetyltransferase (GNAT) family CJ259_RS01070 PF03352 Methyladenine glycosylase CJ259_RS01075 PF03797 Autotransporter beta-domain CJ259_RS01080 PF07690 Major Facilitator Superfamily CJ259_RS01085 PF08019 Phosphoethanolamine transferase EptA/EptB CJ259_RS01085 PF00884 Sulfatase CJ259_RS01120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ259_RS01125 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS01130 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS01130 PF12911 N-terminal TM domain of oligopeptide transport permease C CJ259_RS01135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ259_RS01135 PF00005 ABC transporter CJ259_RS01140 PF00005 ABC transporter CJ259_RS01140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ259_RS01155 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CJ259_RS01165 PF03170 Bacterial cellulose synthase subunit CJ259_RS01170 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CJ259_RS01180 PF01270 Glycosyl hydrolases family 8 CJ259_RS01185 PF11658 Cellulose biosynthesis protein BcsG CJ259_RS01190 PF11120 Cellulose biosynthesis protein BcsF CJ259_RS01195 PF10995 Cellulose biosynthesis GIL CJ259_RS01200 PF10945 Cellulose biosynthesis protein BcsR CJ259_RS01205 PF06564 Cellulose biosynthesis protein BcsQ CJ259_RS01210 PF00535 Glycosyl transferase family 2 CJ259_RS01210 PF07238 PilZ domain CJ259_RS01215 PF03170 Bacterial cellulose synthase subunit CJ259_RS01220 PF01270 Glycosyl hydrolases family 8 CJ259_RS01225 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CJ259_RS01230 PF00563 EAL domain CJ259_RS01230 PF00672 HAMP domain CJ259_RS01230 PF17154 Gammaproteobacterial periplasmic sensor domain CJ259_RS01230 PF00990 Diguanylate cyclase, GGDEF domain CJ259_RS01235 PF00375 Sodium:dicarboxylate symporter family CJ259_RS01240 PF05193 Peptidase M16 inactive domain CJ259_RS01240 PF00675 Insulinase (Peptidase family M16) CJ259_RS01245 PF00294 pfkB family carbohydrate kinase CJ259_RS01255 PF05170 AsmA family CJ259_RS01260 PF00083 Sugar (and other) transporter CJ259_RS01260 PF07690 Major Facilitator Superfamily CJ259_RS01270 PF03631 Virulence factor BrkB CJ259_RS01275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS01275 PF03466 LysR substrate binding domain CJ259_RS01285 PF13302 Acetyltransferase (GNAT) domain CJ259_RS01290 PF01204 Trehalase CJ259_RS01295 PF00465 Iron-containing alcohol dehydrogenase CJ259_RS01305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJ259_RS01305 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ259_RS01310 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CJ259_RS01315 PF01569 PAP2 superfamily CJ259_RS01320 PF01432 Peptidase family M3 CJ259_RS01325 PF04445 Putative SAM-dependent methyltransferase CJ259_RS01330 PF00854 POT family CJ259_RS01335 PF00582 Universal stress protein family CJ259_RS01340 PF10625 Universal stress protein B (UspB) CJ259_RS01345 PF01384 Phosphate transporter family CJ259_RS01355 PF01769 Divalent cation transporter CJ259_RS01355 PF00571 CBS domain CJ259_RS01355 PF03448 MgtE intracellular N domain CJ259_RS01360 PF08753 NikR C terminal nickel binding domain CJ259_RS01360 PF01402 Ribbon-helix-helix protein, copG family CJ259_RS01365 PF00005 ABC transporter CJ259_RS01370 PF00005 ABC transporter CJ259_RS01375 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS01380 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS01385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ259_RS01395 PF03466 LysR substrate binding domain CJ259_RS01395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS01400 PF05870 Phenolic acid decarboxylase (PAD) CJ259_RS01405 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CJ259_RS01410 PF00535 Glycosyl transferase family 2 CJ259_RS01415 PF00551 Formyl transferase CJ259_RS01415 PF01370 NAD dependent epimerase/dehydratase family CJ259_RS01415 PF02911 Formyl transferase, C-terminal domain CJ259_RS01420 PF01522 Polysaccharide deacetylase CJ259_RS01425 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CJ259_RS01430 PF00892 EamA-like transporter family CJ259_RS01440 PF01594 AI-2E family transporter CJ259_RS01445 PF07690 Major Facilitator Superfamily CJ259_RS01450 PF08786 DcrB CJ259_RS01455 PF02592 Putative vitamin uptake transporter CJ259_RS01460 PF01206 Sulfurtransferase TusA CJ259_RS01465 PF00403 Heavy-metal-associated domain CJ259_RS01470 PF07947 YhhN family CJ259_RS01475 PF10694 Protein of unknown function (DUF2500) CJ259_RS01480 PF06611 Protein of unknown function (DUF1145) CJ259_RS01490 PF00448 SRP54-type protein, GTPase domain CJ259_RS01490 PF02881 SRP54-type protein, helical bundle domain CJ259_RS01495 PF00005 ABC transporter CJ259_RS01500 PF02687 FtsX-like permease family CJ259_RS01500 PF18075 FtsX extracellular domain CJ259_RS01505 PF04542 Sigma-70 region 2 CJ259_RS01505 PF04545 Sigma-70, region 4 CJ259_RS01510 PF00155 Aminotransferase class I and II CJ259_RS01510 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS01515 PF00202 Aminotransferase class-III CJ259_RS01525 PF13458 Periplasmic binding protein CJ259_RS01530 PF12568 Acetyltransferase (GNAT) domain, PanZ CJ259_RS01540 PF13458 Periplasmic binding protein CJ259_RS01545 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS01550 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS01550 PF11862 Domain of unknown function (DUF3382) CJ259_RS01555 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJ259_RS01555 PF00005 ABC transporter CJ259_RS01560 PF00005 ABC transporter CJ259_RS01565 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CJ259_RS01575 PF13416 Bacterial extracellular solute-binding protein CJ259_RS01580 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS01585 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS01590 PF17912 MalK OB fold domain CJ259_RS01590 PF00005 ABC transporter CJ259_RS01595 PF03009 Glycerophosphoryl diester phosphodiesterase family CJ259_RS01600 PF10956 Protein of unknown function (DUF2756) CJ259_RS01610 PF00583 Acetyltransferase (GNAT) family CJ259_RS01620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJ259_RS01620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJ259_RS01625 PF02678 Pirin CJ259_RS01625 PF17954 Quercetinase C-terminal cupin domain CJ259_RS01630 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CJ259_RS01630 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS01635 PF01202 Shikimate kinase CJ259_RS01640 PF02447 GntP family permease CJ259_RS01650 PF02774 Semialdehyde dehydrogenase, dimerisation domain CJ259_RS01650 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJ259_RS01655 PF02806 Alpha amylase, C-terminal all-beta domain CJ259_RS01655 PF00128 Alpha amylase, catalytic domain CJ259_RS01655 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CJ259_RS01660 PF18390 Glycogen debranching enzyme C-terminal domain CJ259_RS01660 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CJ259_RS01660 PF00128 Alpha amylase, catalytic domain CJ259_RS01665 PF00483 Nucleotidyl transferase CJ259_RS01670 PF00534 Glycosyl transferases group 1 CJ259_RS01670 PF08323 Starch synthase catalytic domain CJ259_RS01675 PF00343 Carbohydrate phosphorylase CJ259_RS01690 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CJ259_RS01690 PF01266 FAD dependent oxidoreductase CJ259_RS01695 PF00581 Rhodanese-like domain CJ259_RS01700 PF01694 Rhomboid family CJ259_RS01700 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CJ259_RS01705 PF00455 DeoR C terminal sensor domain CJ259_RS01705 PF08220 DeoR-like helix-turn-helix domain CJ259_RS01710 PF00196 Bacterial regulatory proteins, luxR family CJ259_RS01710 PF17874 MalT-like TPR region CJ259_RS01720 PF00343 Carbohydrate phosphorylase CJ259_RS01725 PF02446 4-alpha-glucanotransferase CJ259_RS01730 PF02447 GntP family permease CJ259_RS01735 PF01106 NifU-like domain CJ259_RS01735 PF01521 Iron-sulphur cluster biosynthesis CJ259_RS01740 PF00156 Phosphoribosyl transferase domain CJ259_RS01745 PF00561 alpha/beta hydrolase fold CJ259_RS01755 PF09012 FeoC like transcriptional regulator CJ259_RS01760 PF07664 Ferrous iron transport protein B C terminus CJ259_RS01760 PF17910 FeoB cytosolic helical domain CJ259_RS01760 PF02421 Ferrous iron transport protein B CJ259_RS01760 PF07670 Nucleoside recognition CJ259_RS01765 PF04023 FeoA domain CJ259_RS01770 PF17674 HHH domain CJ259_RS01770 PF09371 Tex-like protein N-terminal domain CJ259_RS01770 PF00575 S1 RNA binding domain CJ259_RS01770 PF16921 Tex protein YqgF-like domain CJ259_RS01775 PF03449 Transcription elongation factor, N-terminal CJ259_RS01775 PF01272 Transcription elongation factor, GreA/GreB, C-term CJ259_RS01780 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS01780 PF00072 Response regulator receiver domain CJ259_RS01785 PF00672 HAMP domain CJ259_RS01785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS01785 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS01790 PF01293 Phosphoenolpyruvate carboxykinase CJ259_RS01795 PF01430 Hsp33 protein CJ259_RS01800 PF01479 S4 domain CJ259_RS01805 PF13419 Haloacid dehalogenase-like hydrolase CJ259_RS01810 PF07095 Intracellular growth attenuator protein IgaA CJ259_RS01815 PF00293 NUDIX domain CJ259_RS01820 PF00905 Penicillin binding protein transpeptidase domain CJ259_RS01820 PF17092 Penicillin-binding protein OB-like domain CJ259_RS01820 PF00912 Transglycosylase CJ259_RS01845 PF00263 Bacterial type II and III secretion system protein CJ259_RS01845 PF03958 Bacterial type II/III secretion system short domain CJ259_RS01855 PF01202 Shikimate kinase CJ259_RS01860 PF01761 3-dehydroquinate synthase CJ259_RS01865 PF05036 Sporulation related domain CJ259_RS01870 PF02086 D12 class N6 adenine-specific DNA methyltransferase CJ259_RS01875 PF00834 Ribulose-phosphate 3 epimerase family CJ259_RS01880 PF13419 Haloacid dehalogenase-like hydrolase CJ259_RS01885 PF00579 tRNA synthetases class I (W and Y) CJ259_RS01890 PF10414 Sirohaem synthase dimerisation region CJ259_RS01890 PF14824 Sirohaem biosynthesis protein central CJ259_RS01890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJ259_RS01895 PF13806 Rieske-like [2Fe-2S] domain CJ259_RS01900 PF18267 Rubredoxin NAD+ reductase C-terminal domain CJ259_RS01900 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ259_RS01900 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJ259_RS01900 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJ259_RS01900 PF04324 BFD-like [2Fe-2S] binding domain CJ259_RS01905 PF07969 Amidohydrolase family CJ259_RS01910 PF07690 Major Facilitator Superfamily CJ259_RS01915 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CJ259_RS01920 PF10832 Protein of unknown function (DUF2559) CJ259_RS01925 PF02661 Fic/DOC family CJ259_RS01930 PF00117 Glutamine amidotransferase class-I CJ259_RS01935 PF00202 Aminotransferase class-III CJ259_RS01940 PF12805 FUSC-like inner membrane protein yccS CJ259_RS01945 PF00027 Cyclic nucleotide-binding domain CJ259_RS01945 PF13545 Crp-like helix-turn-helix domain CJ259_RS01955 PF02566 OsmC-like protein CJ259_RS01960 PF00485 Phosphoribulokinase / Uridine kinase family CJ259_RS01965 PF06794 Uncharacterised protein family (UPF0270) CJ259_RS01970 PF00561 alpha/beta hydrolase fold CJ259_RS01980 PF00005 ABC transporter CJ259_RS01980 PF12848 ABC transporter CJ259_RS01985 PF02525 Flavodoxin-like fold CJ259_RS01990 PF02254 TrkA-N domain CJ259_RS01990 PF00999 Sodium/hydrogen exchanger family CJ259_RS01995 PF09526 Probable metal-binding protein (DUF2387) CJ259_RS02000 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJ259_RS02005 PF04102 SlyX CJ259_RS02010 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CJ259_RS02010 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJ259_RS02015 PF13309 HTH domain CJ259_RS02015 PF08348 YheO-like PAS domain CJ259_RS02020 PF02635 DsrE/DsrF-like family CJ259_RS02025 PF02635 DsrE/DsrF-like family CJ259_RS02030 PF04077 DsrH like protein CJ259_RS02035 PF00164 Ribosomal protein S12/S23 CJ259_RS02040 PF00177 Ribosomal protein S7p/S5e CJ259_RS02045 PF03144 Elongation factor Tu domain 2 CJ259_RS02045 PF00009 Elongation factor Tu GTP binding domain CJ259_RS02045 PF03764 Elongation factor G, domain IV CJ259_RS02045 PF14492 Elongation Factor G, domain II CJ259_RS02045 PF00679 Elongation factor G C-terminus CJ259_RS02050 PF03143 Elongation factor Tu C-terminal domain CJ259_RS02050 PF00009 Elongation factor Tu GTP binding domain CJ259_RS02050 PF03144 Elongation factor Tu domain 2 CJ259_RS02055 PF04324 BFD-like [2Fe-2S] binding domain CJ259_RS02060 PF00210 Ferritin-like domain CJ259_RS02065 PF01478 Type IV leader peptidase family CJ259_RS02070 PF00338 Ribosomal protein S10p/S20e CJ259_RS02075 PF00297 Ribosomal protein L3 CJ259_RS02080 PF00573 Ribosomal protein L4/L1 family CJ259_RS02085 PF00276 Ribosomal protein L23 CJ259_RS02090 PF03947 Ribosomal Proteins L2, C-terminal domain CJ259_RS02090 PF00181 Ribosomal Proteins L2, RNA binding domain CJ259_RS02095 PF00203 Ribosomal protein S19 CJ259_RS02100 PF00237 Ribosomal protein L22p/L17e CJ259_RS02105 PF07650 KH domain CJ259_RS02105 PF00189 Ribosomal protein S3, C-terminal domain CJ259_RS02110 PF00252 Ribosomal protein L16p/L10e CJ259_RS02115 PF00831 Ribosomal L29 protein CJ259_RS02120 PF00366 Ribosomal protein S17 CJ259_RS02125 PF00238 Ribosomal protein L14p/L23e CJ259_RS02130 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CJ259_RS02130 PF00467 KOW motif CJ259_RS02135 PF00281 Ribosomal protein L5 CJ259_RS02135 PF00673 ribosomal L5P family C-terminus CJ259_RS02140 PF00253 Ribosomal protein S14p/S29e CJ259_RS02145 PF00410 Ribosomal protein S8 CJ259_RS02150 PF00347 Ribosomal protein L6 CJ259_RS02155 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CJ259_RS02160 PF03719 Ribosomal protein S5, C-terminal domain CJ259_RS02160 PF00333 Ribosomal protein S5, N-terminal domain CJ259_RS02165 PF00327 Ribosomal protein L30p/L7e CJ259_RS02170 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CJ259_RS02175 PF00344 SecY translocase CJ259_RS02180 PF00444 Ribosomal protein L36 CJ259_RS02185 PF00416 Ribosomal protein S13/S18 CJ259_RS02190 PF00411 Ribosomal protein S11 CJ259_RS02195 PF00163 Ribosomal protein S4/S9 N-terminal domain CJ259_RS02195 PF01479 S4 domain CJ259_RS02200 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CJ259_RS02200 PF01000 RNA polymerase Rpb3/RpoA insert domain CJ259_RS02200 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CJ259_RS02205 PF01196 Ribosomal protein L17 CJ259_RS02210 PF09350 Domain of unknown function (DUF1992) CJ259_RS02215 PF13411 MerR HTH family regulatory protein CJ259_RS02220 PF03889 Alternative ribosome-rescue factor A CJ259_RS02225 PF01741 Large-conductance mechanosensitive channel, MscL CJ259_RS02230 PF02254 TrkA-N domain CJ259_RS02230 PF02080 TrkA-C domain CJ259_RS02235 PF01189 16S rRNA methyltransferase RsmB/F CJ259_RS02235 PF01029 NusB family CJ259_RS02240 PF02911 Formyl transferase, C-terminal domain CJ259_RS02240 PF00551 Formyl transferase CJ259_RS02245 PF01327 Polypeptide deformylase CJ259_RS02250 PF02481 DNA recombination-mediator protein A CJ259_RS02250 PF17782 DprA winged helix domain CJ259_RS02255 PF04361 Protein of unknown function (DUF494) CJ259_RS02260 PF01396 Topoisomerase DNA binding C4 zinc finger CJ259_RS02265 PF01300 Telomere recombination CJ259_RS02270 PF01488 Shikimate / quinate 5-dehydrogenase CJ259_RS02270 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CJ259_RS02270 PF08501 Shikimate dehydrogenase substrate binding domain CJ259_RS02275 PF07369 Protein of unknown function (DUF1488) CJ259_RS02280 PF00132 Bacterial transferase hexapeptide (six repeats) CJ259_RS02325 PF00873 AcrB/AcrD/AcrF family CJ259_RS02330 PF00529 HlyD membrane-fusion protein of T1SS CJ259_RS02330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJ259_RS02335 PF08361 MAATS-type transcriptional repressor, C-terminal region CJ259_RS02335 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS02340 PF14659 Phage integrase, N-terminal SAM-like domain CJ259_RS02340 PF00589 Phage integrase family CJ259_RS02340 PF13356 Arm DNA-binding domain CJ259_RS02355 PF10548 P22AR C-terminal domain CJ259_RS02355 PF08346 AntA/AntB antirepressor CJ259_RS02445 PF03354 Phage Terminase CJ259_RS02455 PF02954 Bacterial regulatory protein, Fis family CJ259_RS02460 PF01207 Dihydrouridine synthase (Dus) CJ259_RS02475 PF00474 Sodium:solute symporter family CJ259_RS02480 PF06196 Protein of unknown function (DUF997) CJ259_RS02485 PF02785 Biotin carboxylase C-terminal domain CJ259_RS02485 PF00289 Biotin carboxylase, N-terminal domain CJ259_RS02485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJ259_RS02490 PF00364 Biotin-requiring enzyme CJ259_RS02495 PF01220 Dehydroquinase class II CJ259_RS02500 PF01794 Ferric reductase like transmembrane component CJ259_RS02505 PF00174 Oxidoreductase molybdopterin binding domain CJ259_RS02515 PF17157 Gammaproteobacterial periplasmic sensor domain CJ259_RS02515 PF00990 Diguanylate cyclase, GGDEF domain CJ259_RS02515 PF00563 EAL domain CJ259_RS02525 PF04085 rod shape-determining protein MreC CJ259_RS02530 PF04093 rod shape-determining protein MreD CJ259_RS02535 PF02545 Maf-like protein CJ259_RS02540 PF00575 S1 RNA binding domain CJ259_RS02540 PF10150 Ribonuclease E/G family CJ259_RS02545 PF13116 Protein of unknown function CJ259_RS02545 PF13502 AsmA-like C-terminal region CJ259_RS02550 PF01523 Putative modulator of DNA gyrase CJ259_RS02555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS02555 PF03466 LysR substrate binding domain CJ259_RS02560 PF07869 Protein of unknown function (DUF1656) CJ259_RS02565 PF13533 Biotin-lipoyl like CJ259_RS02570 PF04632 Fusaric acid resistance protein family CJ259_RS02575 PF01337 Barstar (barnase inhibitor) CJ259_RS02580 PF07338 Protein of unknown function (DUF1471) CJ259_RS02585 PF07338 Protein of unknown function (DUF1471) CJ259_RS02590 PF01316 Arginine repressor, DNA binding domain CJ259_RS02590 PF02863 Arginine repressor, C-terminal domain CJ259_RS02595 PF00056 lactate/malate dehydrogenase, NAD binding domain CJ259_RS02595 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CJ259_RS02600 PF13180 PDZ domain CJ259_RS02605 PF00595 PDZ domain CJ259_RS02605 PF13180 PDZ domain CJ259_RS02610 PF06295 Protein of unknown function (DUF1043) CJ259_RS02615 PF03969 AFG1-like ATPase CJ259_RS02620 PF00572 Ribosomal protein L13 CJ259_RS02625 PF00380 Ribosomal protein S9/S16 CJ259_RS02635 PF02798 Glutathione S-transferase, N-terminal domain CJ259_RS02635 PF00043 Glutathione S-transferase, C-terminal domain CJ259_RS02640 PF04386 Stringent starvation protein B CJ259_RS02645 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CJ259_RS02650 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ259_RS02650 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJ259_RS02655 PF00310 Glutamine amidotransferases class-II CJ259_RS02655 PF04898 Glutamate synthase central domain CJ259_RS02655 PF01645 Conserved region in glutamate synthase CJ259_RS02655 PF01493 GXGXG motif CJ259_RS02660 PF16199 Radical_SAM C-terminal domain CJ259_RS02660 PF04055 Radical SAM superfamily CJ259_RS02665 PF07690 Major Facilitator Superfamily CJ259_RS02670 PF00107 Zinc-binding dehydrogenase CJ259_RS02670 PF08240 Alcohol dehydrogenase GroES-like domain CJ259_RS02675 PF03786 D-mannonate dehydratase (UxuA) CJ259_RS02680 PF00989 PAS fold CJ259_RS02680 PF00072 Response regulator receiver domain CJ259_RS02680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS02680 PF18415 Histidine kinase receptor ArcB trans-membrane domain CJ259_RS02680 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS02680 PF01627 Hpt domain CJ259_RS02690 PF00912 Transglycosylase CJ259_RS02695 PF00381 PTS HPr component phosphorylation site CJ259_RS02700 PF03668 P-loop ATPase protein family CJ259_RS02705 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJ259_RS02710 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CJ259_RS02715 PF04963 Sigma-54 factor, core binding domain CJ259_RS02715 PF04552 Sigma-54, DNA binding domain CJ259_RS02715 PF00309 Sigma-54 factor, Activator interacting domain (AID) CJ259_RS02720 PF00005 ABC transporter CJ259_RS02720 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJ259_RS02725 PF03968 OstA-like protein CJ259_RS02730 PF06835 Lipopolysaccharide-assembly, LptC-related CJ259_RS02740 PF00571 CBS domain CJ259_RS02740 PF01380 SIS domain CJ259_RS02745 PF01699 Sodium/calcium exchanger protein CJ259_RS02755 PF00005 ABC transporter CJ259_RS02760 PF02405 Permease MlaE CJ259_RS02765 PF02470 MlaD protein CJ259_RS02770 PF05494 MlaC protein CJ259_RS02775 PF13466 STAS domain CJ259_RS02780 PF01722 BolA-like protein CJ259_RS02785 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJ259_RS02790 PF13693 Winged helix-turn-helix DNA-binding CJ259_RS02795 PF00348 Polyprenyl synthetase CJ259_RS02800 PF00829 Ribosomal prokaryotic L21 protein CJ259_RS02805 PF01016 Ribosomal L27 protein CJ259_RS02810 PF00892 EamA-like transporter family CJ259_RS02815 PF01926 50S ribosome-binding GTPase CJ259_RS02815 PF01018 GTP1/OBG CJ259_RS02820 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CJ259_RS02825 PF03449 Transcription elongation factor, N-terminal CJ259_RS02825 PF01272 Transcription elongation factor, GreA/GreB, C-term CJ259_RS02830 PF01985 CRS1 / YhbY (CRM) domain CJ259_RS02840 PF01728 FtsJ-like methyltransferase CJ259_RS02845 PF01434 Peptidase family M41 CJ259_RS02845 PF17862 AAA+ lid domain CJ259_RS02845 PF00004 ATPase family associated with various cellular activities (AAA) CJ259_RS02845 PF06480 FtsH Extracellular CJ259_RS02850 PF00809 Pterin binding enzyme CJ259_RS02855 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJ259_RS02855 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJ259_RS02855 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJ259_RS02855 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJ259_RS02860 PF03840 Preprotein translocase SecG subunit CJ259_RS02875 PF07437 YfaZ precursor CJ259_RS02880 PF15977 Winged helix-turn-helix DNA binding CJ259_RS02885 PF00764 Arginosuccinate synthase CJ259_RS02895 PF02576 RimP N-terminal domain CJ259_RS02895 PF17384 RimP C-terminal SH3 domain CJ259_RS02900 PF00575 S1 RNA binding domain CJ259_RS02900 PF08529 NusA N-terminal domain CJ259_RS02900 PF13184 NusA-like KH domain CJ259_RS02905 PF04760 Translation initiation factor IF-2, N-terminal region CJ259_RS02905 PF08364 Bacterial translation initiation factor IF-2 associated region CJ259_RS02905 PF00009 Elongation factor Tu GTP binding domain CJ259_RS02905 PF11987 Translation-initiation factor 2 CJ259_RS02910 PF02033 Ribosome-binding factor A CJ259_RS02915 PF01509 TruB family pseudouridylate synthase (N terminal domain) CJ259_RS02915 PF16198 tRNA pseudouridylate synthase B C-terminal domain CJ259_RS02915 PF09157 Pseudouridine synthase II TruB, C-terminal CJ259_RS02920 PF00312 Ribosomal protein S15 CJ259_RS02930 PF00575 S1 RNA binding domain CJ259_RS02930 PF00013 KH domain CJ259_RS02930 PF03725 3' exoribonuclease family, domain 2 CJ259_RS02930 PF01138 3' exoribonuclease family, domain 1 CJ259_RS02930 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CJ259_RS02935 PF07719 Tetratricopeptide repeat CJ259_RS02935 PF13181 Tetratricopeptide repeat CJ259_RS02945 PF12343 Cold shock protein DEAD box A CJ259_RS02945 PF00270 DEAD/DEAH box helicase CJ259_RS02945 PF03880 DbpA RNA binding domain CJ259_RS02945 PF00271 Helicase conserved C-terminal domain CJ259_RS02950 PF03222 Tryptophan/tyrosine permease family CJ259_RS02955 PF00296 Luciferase-like monooxygenase CJ259_RS02960 PF01136 Peptidase family U32 CJ259_RS02965 PF01136 Peptidase family U32 CJ259_RS02970 PF02036 SCP-2 sterol transfer family CJ259_RS02975 PF13508 Acetyltransferase (GNAT) domain CJ259_RS02980 PF01541 GIY-YIG catalytic domain CJ259_RS02990 PF01965 DJ-1/PfpI family CJ259_RS02995 PF13460 NAD(P)H-binding CJ259_RS03000 PF03773 Predicted permease CJ259_RS03005 PF04972 BON domain CJ259_RS03010 PF13580 SIS domain CJ259_RS03015 PF02021 Uncharacterised protein family UPF0102 CJ259_RS03020 PF04348 LppC putative lipoprotein CJ259_RS03025 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJ259_RS03030 PF02661 Fic/DOC family CJ259_RS03030 PF13784 Fic/DOC family N-terminal CJ259_RS03035 PF08220 DeoR-like helix-turn-helix domain CJ259_RS03040 PF00107 Zinc-binding dehydrogenase CJ259_RS03040 PF08240 Alcohol dehydrogenase GroES-like domain CJ259_RS03045 PF03611 PTS system sugar-specific permease component CJ259_RS03050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJ259_RS03055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJ259_RS03060 PF08013 Tagatose 6 phosphate kinase CJ259_RS03065 PF00381 PTS HPr component phosphorylation site CJ259_RS03065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJ259_RS03070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJ259_RS03070 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJ259_RS03075 PF00294 pfkB family carbohydrate kinase CJ259_RS03080 PF01116 Fructose-bisphosphate aldolase class-II CJ259_RS03085 PF00455 DeoR C terminal sensor domain CJ259_RS03085 PF08220 DeoR-like helix-turn-helix domain CJ259_RS03090 PF00294 pfkB family carbohydrate kinase CJ259_RS03095 PF08666 SAF domain CJ259_RS03095 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CJ259_RS03100 PF07690 Major Facilitator Superfamily CJ259_RS03105 PF03328 HpcH/HpaI aldolase/citrate lyase family CJ259_RS03110 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CJ259_RS03110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJ259_RS03115 PF02595 Glycerate kinase family CJ259_RS03135 PF17954 Quercetinase C-terminal cupin domain CJ259_RS03135 PF02678 Pirin CJ259_RS03140 PF03466 LysR substrate binding domain CJ259_RS03140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS03145 PF05656 Protein of unknown function (DUF805) CJ259_RS03150 PF13409 Glutathione S-transferase, N-terminal domain CJ259_RS03155 PF07681 DoxX CJ259_RS03160 PF13997 YqjK-like protein CJ259_RS03165 PF07332 Putative Actinobacterial Holin-X, holin superfamily III CJ259_RS03170 PF05957 Bacterial protein of unknown function (DUF883) CJ259_RS03175 PF06476 Protein of unknown function (DUF1090) CJ259_RS03180 PF13721 SecD export protein N-terminal TM region CJ259_RS03185 PF09335 SNARE associated Golgi protein CJ259_RS03190 PF07729 FCD domain CJ259_RS03190 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS03195 PF07690 Major Facilitator Superfamily CJ259_RS03200 PF02614 Glucuronate isomerase CJ259_RS03205 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CJ259_RS03205 PF08666 SAF domain CJ259_RS03210 PF10688 Bacterial inner membrane protein CJ259_RS03215 PF00375 Sodium:dicarboxylate symporter family CJ259_RS03220 PF03741 Integral membrane protein TerC family CJ259_RS03225 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJ259_RS03230 PF01863 Protein of unknown function DUF45 CJ259_RS03245 PF05175 Methyltransferase small domain CJ259_RS03250 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJ259_RS03250 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ259_RS03255 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJ259_RS03255 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJ259_RS03260 PF04198 Putative sugar-binding domain CJ259_RS03265 PF00005 ABC transporter CJ259_RS03270 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS03275 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS03280 PF13407 Periplasmic binding protein domain CJ259_RS03285 PF01791 DeoC/LacD family aldolase CJ259_RS03290 PF03992 Antibiotic biosynthesis monooxygenase CJ259_RS03295 PF00202 Aminotransferase class-III CJ259_RS03305 PF03551 Transcriptional regulator PadR-like family CJ259_RS03310 PF08021 Siderophore-interacting FAD-binding domain CJ259_RS03310 PF04954 Siderophore-interacting protein CJ259_RS03315 PF02734 DAK2 domain CJ259_RS03315 PF02733 Dak1 domain CJ259_RS03320 PF05524 PEP-utilising enzyme, N-terminal CJ259_RS03320 PF00391 PEP-utilising enzyme, mobile domain CJ259_RS03320 PF00381 PTS HPr component phosphorylation site CJ259_RS03320 PF03610 PTS system fructose IIA component CJ259_RS03325 PF02734 DAK2 domain CJ259_RS03330 PF02733 Dak1 domain CJ259_RS03345 PF00465 Iron-containing alcohol dehydrogenase CJ259_RS03350 PF00158 Sigma-54 interaction domain CJ259_RS03350 PF00989 PAS fold CJ259_RS03350 PF02954 Bacterial regulatory protein, Fis family CJ259_RS03355 PF01923 Cobalamin adenosyltransferase CJ259_RS03360 PF02288 Dehydratase medium subunit CJ259_RS03365 PF00465 Iron-containing alcohol dehydrogenase CJ259_RS03370 PF03928 Haem-degrading CJ259_RS03375 PF02286 Dehydratase large subunit CJ259_RS03380 PF02288 Dehydratase medium subunit CJ259_RS03385 PF02287 Dehydratase small subunit CJ259_RS03390 PF08841 Diol dehydratase reactivase ATPase-like domain CJ259_RS03390 PF18427 DD-reactivating factor swiveling domain CJ259_RS03395 PF00230 Major intrinsic protein CJ259_RS03400 PF06411 HdeA/HdeB family CJ259_RS03405 PF03729 Short repeat of unknown function (DUF308) CJ259_RS03410 PF10938 YfdX protein CJ259_RS03415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS03415 PF01627 Hpt domain CJ259_RS03415 PF00072 Response regulator receiver domain CJ259_RS03415 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ259_RS03415 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS03420 PF00072 Response regulator receiver domain CJ259_RS03420 PF00196 Bacterial regulatory proteins, luxR family CJ259_RS03435 PF00589 Phage integrase family CJ259_RS03480 PF01609 Transposase DDE domain CJ259_RS03480 PF05598 Transposase domain (DUF772) CJ259_RS03525 PF03354 Phage Terminase CJ259_RS03540 PF03167 Uracil DNA glycosylase superfamily CJ259_RS03545 PF04542 Sigma-70 region 2 CJ259_RS03545 PF00140 Sigma-70 factor, region 1.2 CJ259_RS03545 PF04545 Sigma-70, region 4 CJ259_RS03545 PF04539 Sigma-70 region 3 CJ259_RS03545 PF04546 Sigma-70, non-essential region CJ259_RS03545 PF03979 Sigma-70 factor, region 1.1 CJ259_RS03550 PF08278 DNA primase DnaG DnaB-binding CJ259_RS03550 PF01807 CHC2 zinc finger CJ259_RS03550 PF08275 DNA primase catalytic core, N-terminal domain CJ259_RS03550 PF10410 DnaB-helicase binding domain of primase CJ259_RS03555 PF01165 Ribosomal protein S21 CJ259_RS03560 PF00814 Glycoprotease family CJ259_RS03570 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJ259_RS03575 PF01730 UreF CJ259_RS03580 PF05194 UreE urease accessory protein, C-terminal domain CJ259_RS03580 PF02814 UreE urease accessory protein, N-terminal domain CJ259_RS03585 PF01979 Amidohydrolase family CJ259_RS03585 PF00449 Urease alpha-subunit, N-terminal domain CJ259_RS03590 PF00699 Urease beta subunit CJ259_RS03595 PF00547 Urease, gamma subunit CJ259_RS03600 PF01774 UreD urease accessory protein CJ259_RS03610 PF02660 Glycerol-3-phosphate acyltransferase CJ259_RS03615 PF02152 Dihydroneopterin aldolase CJ259_RS03620 PF02673 Bacitracin resistance protein BacA CJ259_RS03625 PF12627 Probable RNA and SrmB- binding site of polymerase A CJ259_RS03625 PF01743 Poly A polymerase head domain CJ259_RS03625 PF01966 HD domain CJ259_RS03630 PF08239 Bacterial SH3 domain CJ259_RS03635 PF01928 CYTH domain CJ259_RS03640 PF03710 Glutamate-ammonia ligase adenylyltransferase CJ259_RS03640 PF08335 GlnD PII-uridylyltransferase CJ259_RS03645 PF00294 pfkB family carbohydrate kinase CJ259_RS03645 PF01467 Cytidylyltransferase-like CJ259_RS03650 PF08971 Glycogen synthesis protein CJ259_RS03655 PF04380 Membrane fusogenic activity CJ259_RS03660 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CJ259_RS03665 PF02535 ZIP Zinc transporter CJ259_RS03670 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CJ259_RS03675 PF03738 Glutathionylspermidine synthase preATP-grasp CJ259_RS03680 PF06693 Protein of unknown function (DUF1190) CJ259_RS03685 PF02321 Outer membrane efflux protein CJ259_RS03690 PF00293 NUDIX domain CJ259_RS03695 PF06853 Protein of unknown function (DUF1249) CJ259_RS03700 PF00149 Calcineurin-like phosphoesterase CJ259_RS03705 PF05728 Uncharacterised protein family (UPF0227) CJ259_RS03710 PF01751 Toprim domain CJ259_RS03710 PF00986 DNA gyrase B subunit, carboxyl terminus CJ259_RS03710 PF00204 DNA gyrase B CJ259_RS03710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS03715 PF03992 Antibiotic biosynthesis monooxygenase CJ259_RS03720 PF02525 Flavodoxin-like fold CJ259_RS03725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS03725 PF08521 Two-component sensor kinase N-terminal CJ259_RS03725 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS03730 PF00072 Response regulator receiver domain CJ259_RS03730 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS03735 PF04076 Bacterial OB fold (BOF) protein CJ259_RS03740 PF06445 GyrI-like small molecule binding domain CJ259_RS03745 PF03989 DNA gyrase C-terminal domain, beta-propeller CJ259_RS03745 PF00521 DNA gyrase/topoisomerase IV, subunit A CJ259_RS03750 PF01553 Acyltransferase CJ259_RS03755 PF00394 Multicopper oxidase CJ259_RS03755 PF07731 Multicopper oxidase CJ259_RS03755 PF07732 Multicopper oxidase CJ259_RS03760 PF11842 Domain of unknown function (DUF3362) CJ259_RS03760 PF04055 Radical SAM superfamily CJ259_RS03760 PF08497 Radical SAM N-terminal CJ259_RS03770 PF00248 Aldo/keto reductase family CJ259_RS03775 PF00465 Iron-containing alcohol dehydrogenase CJ259_RS03780 PF12833 Helix-turn-helix domain CJ259_RS03780 PF06719 AraC-type transcriptional regulator N-terminus CJ259_RS03785 PF09335 SNARE associated Golgi protein CJ259_RS03790 PF01053 Cys/Met metabolism PLP-dependent enzyme CJ259_RS03800 PF01618 MotA/TolQ/ExbB proton channel family CJ259_RS03805 PF02472 Biopolymer transport protein ExbD/TolR CJ259_RS03815 PF04616 Glycosyl hydrolases family 43 CJ259_RS03815 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CJ259_RS03820 PF03350 Uncharacterized protein family, UPF0114 CJ259_RS03825 PF01738 Dienelactone hydrolase family CJ259_RS03830 PF11115 Protein of unknown function (DUF2623) CJ259_RS03835 PF02798 Glutathione S-transferase, N-terminal domain CJ259_RS03845 PF05257 CHAP domain CJ259_RS03845 PF03738 Glutathionylspermidine synthase preATP-grasp CJ259_RS03850 PF00155 Aminotransferase class I and II CJ259_RS03870 PF03466 LysR substrate binding domain CJ259_RS03870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS03875 PF01053 Cys/Met metabolism PLP-dependent enzyme CJ259_RS03880 PF00571 CBS domain CJ259_RS03880 PF00291 Pyridoxal-phosphate dependent enzyme CJ259_RS03890 PF04474 Protein of unknown function (DUF554) CJ259_RS03900 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CJ259_RS03900 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CJ259_RS03900 PF01276 Orn/Lys/Arg decarboxylase, major domain CJ259_RS03905 PF03825 Nucleoside H+ symporter CJ259_RS03910 PF01464 Transglycosylase SLT domain CJ259_RS03910 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CJ259_RS03915 PF04362 Bacterial Fe(2+) trafficking CJ259_RS03920 PF14815 NUDIX domain CJ259_RS03920 PF00633 Helix-hairpin-helix motif CJ259_RS03920 PF10576 Iron-sulfur binding domain of endonuclease III CJ259_RS03920 PF00730 HhH-GPD superfamily base excision DNA repair protein CJ259_RS03925 PF02390 Putative methyltransferase CJ259_RS03930 PF04320 Protein with unknown function (DUF469) CJ259_RS03935 PF11101 Protein of unknown function (DUF2884) CJ259_RS03940 PF06969 HemN C-terminal domain CJ259_RS03940 PF04055 Radical SAM superfamily CJ259_RS03945 PF01725 Ham1 family CJ259_RS03950 PF02594 Uncharacterised ACR, YggU family COG1872 CJ259_RS03955 PF02325 YGGT family CJ259_RS03960 PF01168 Alanine racemase, N-terminal domain CJ259_RS03965 PF00437 Type II/IV secretion system protein CJ259_RS03970 PF00196 Bacterial regulatory proteins, luxR family CJ259_RS03975 PF03652 Holliday junction resolvase CJ259_RS03980 PF02622 Uncharacterized ACR, COG1678 CJ259_RS03985 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CJ259_RS03985 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CJ259_RS03990 PF04452 RNA methyltransferase CJ259_RS03995 PF04231 Endonuclease I CJ259_RS04000 PF17283 SprT-like zinc ribbon domain CJ259_RS04000 PF10263 SprT-like family CJ259_RS04005 PF00083 Sugar (and other) transporter CJ259_RS04010 PF02772 S-adenosylmethionine synthetase, central domain CJ259_RS04010 PF02773 S-adenosylmethionine synthetase, C-terminal domain CJ259_RS04010 PF00438 S-adenosylmethionine synthetase, N-terminal domain CJ259_RS04025 PF17810 Arginine decarboxylase helical bundle domain CJ259_RS04025 PF17944 Arginine decarboxylase C-terminal helical extension CJ259_RS04025 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJ259_RS04030 PF00491 Arginase family CJ259_RS04045 PF00355 Rieske [2Fe-2S] domain CJ259_RS04055 PF00355 Rieske [2Fe-2S] domain CJ259_RS04065 PF09339 IclR helix-turn-helix domain CJ259_RS04065 PF01614 Bacterial transcriptional regulator CJ259_RS04075 PF14759 Reductase C-terminal CJ259_RS04075 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ259_RS04090 PF12697 Alpha/beta hydrolase family CJ259_RS04100 PF03447 Homoserine dehydrogenase, NAD binding domain CJ259_RS04100 PF01958 Domain of unknown function DUF108 CJ259_RS04105 PF00171 Aldehyde dehydrogenase family CJ259_RS04110 PF00205 Thiamine pyrophosphate enzyme, central domain CJ259_RS04110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJ259_RS04110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJ259_RS04115 PF03573 outer membrane porin, OprD family CJ259_RS04120 PF01435 Peptidase family M48 CJ259_RS04125 PF00456 Transketolase, thiamine diphosphate binding domain CJ259_RS04125 PF02779 Transketolase, pyrimidine binding domain CJ259_RS04125 PF02780 Transketolase, C-terminal domain CJ259_RS04130 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CJ259_RS04130 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CJ259_RS04135 PF00162 Phosphoglycerate kinase CJ259_RS04140 PF01116 Fructose-bisphosphate aldolase class-II CJ259_RS04145 PF00924 Mechanosensitive ion channel CJ259_RS04145 PF05552 Conserved TM helix CJ259_RS04150 PF01810 LysE type translocator CJ259_RS04155 PF04402 Protein of unknown function (DUF541) CJ259_RS04160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS04160 PF03466 LysR substrate binding domain CJ259_RS04165 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CJ259_RS04170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJ259_RS04170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJ259_RS04170 PF01842 ACT domain CJ259_RS04175 PF01812 5-formyltetrahydrofolate cyclo-ligase family CJ259_RS04185 PF05164 Cell division protein ZapA CJ259_RS04190 PF03695 Uncharacterised protein family (UPF0149) CJ259_RS04195 PF00557 Metallopeptidase family M24 CJ259_RS04195 PF05195 Aminopeptidase P, N-terminal domain CJ259_RS04200 PF01494 FAD binding domain CJ259_RS04205 PF01494 FAD binding domain CJ259_RS04210 PF08669 Glycine cleavage T-protein C-terminal barrel domain CJ259_RS04210 PF01571 Aminomethyltransferase folate-binding domain CJ259_RS04215 PF01597 Glycine cleavage H-protein CJ259_RS04220 PF02347 Glycine cleavage system P-protein CJ259_RS04230 PF00578 AhpC/TSA family CJ259_RS04250 PF00232 Glycosyl hydrolase family 1 CJ259_RS04255 PF01418 Helix-turn-helix domain, rpiR family CJ259_RS04255 PF01380 SIS domain CJ259_RS04260 PF04266 ASCH domain CJ259_RS04265 PF03006 Haemolysin-III related CJ259_RS04270 PF01571 Aminomethyltransferase folate-binding domain CJ259_RS04275 PF03937 Flavinator of succinate dehydrogenase CJ259_RS04280 PF07254 Membrane-bound toxin component of toxin-antitoxin system CJ259_RS04285 PF00258 Flavodoxin CJ259_RS04290 PF02899 Phage integrase, N-terminal SAM-like domain CJ259_RS04290 PF00589 Phage integrase family CJ259_RS04295 PF13098 Thioredoxin-like domain CJ259_RS04295 PF10411 Disulfide bond isomerase protein N-terminus CJ259_RS04300 PF02272 DHHA1 domain CJ259_RS04300 PF17768 RecJ OB domain CJ259_RS04300 PF01368 DHH family CJ259_RS04310 PF01336 OB-fold nucleic acid binding domain CJ259_RS04310 PF00152 tRNA synthetases class II (D, K and N) CJ259_RS04315 PF00293 NUDIX domain CJ259_RS04325 PF01476 LysM domain CJ259_RS04325 PF01551 Peptidase family M23 CJ259_RS04335 PF07690 Major Facilitator Superfamily CJ259_RS04340 PF03466 LysR substrate binding domain CJ259_RS04340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS04350 PF00248 Aldo/keto reductase family CJ259_RS04355 PF02525 Flavodoxin-like fold CJ259_RS04365 PF03466 LysR substrate binding domain CJ259_RS04365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS04385 PF01022 Bacterial regulatory protein, arsR family CJ259_RS04390 PF02040 Arsenical pump membrane protein CJ259_RS04395 PF03960 ArsC family CJ259_RS04400 PF00854 POT family CJ259_RS04405 PF08986 Domain of unknown function (DUF1889) CJ259_RS04410 PF02321 Outer membrane efflux protein CJ259_RS04415 PF04632 Fusaric acid resistance protein family CJ259_RS04420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJ259_RS04420 PF00529 HlyD membrane-fusion protein of T1SS CJ259_RS04425 PF17090 Uncharacterised protein family CJ259_RS04430 PF06902 Divergent 4Fe-4S mono-cluster CJ259_RS04435 PF14542 GCN5-related N-acetyl-transferase CJ259_RS04445 PF00419 Fimbrial protein CJ259_RS04445 PF09160 FimH, mannose binding CJ259_RS04455 PF00419 Fimbrial protein CJ259_RS04460 PF13953 PapC C-terminal domain CJ259_RS04460 PF00577 Outer membrane usher protein CJ259_RS04460 PF13954 PapC N-terminal domain CJ259_RS04465 PF02753 Pili assembly chaperone PapD, C-terminal domain CJ259_RS04465 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJ259_RS04470 PF00419 Fimbrial protein CJ259_RS04475 PF00419 Fimbrial protein CJ259_RS04480 PF00589 Phage integrase family CJ259_RS04485 PF00589 Phage integrase family CJ259_RS04495 PF03824 High-affinity nickel-transport protein CJ259_RS04500 PF01047 MarR family CJ259_RS04505 PF00892 EamA-like transporter family CJ259_RS04515 PF00419 Fimbrial protein CJ259_RS04520 PF02753 Pili assembly chaperone PapD, C-terminal domain CJ259_RS04520 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJ259_RS04525 PF13953 PapC C-terminal domain CJ259_RS04525 PF13954 PapC N-terminal domain CJ259_RS04525 PF00577 Outer membrane usher protein CJ259_RS04530 PF00419 Fimbrial protein CJ259_RS04545 PF00196 Bacterial regulatory proteins, luxR family CJ259_RS04545 PF00072 Response regulator receiver domain CJ259_RS04555 PF00248 Aldo/keto reductase family CJ259_RS04560 PF03222 Tryptophan/tyrosine permease family CJ259_RS04570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS04570 PF03466 LysR substrate binding domain CJ259_RS04575 PF00108 Thiolase, N-terminal domain CJ259_RS04575 PF02803 Thiolase, C-terminal domain CJ259_RS04580 PF06178 Oligogalacturonate-specific porin protein (KdgM) CJ259_RS04585 PF14583 Oligogalacturonate lyase CJ259_RS04595 PF00083 Sugar (and other) transporter CJ259_RS04600 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS04600 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CJ259_RS04605 PF01306 LacY proton/sugar symporter CJ259_RS04610 PF08244 Glycosyl hydrolases family 32 C terminal CJ259_RS04610 PF00251 Glycosyl hydrolases family 32 N-terminal domain CJ259_RS04625 PF17912 MalK OB fold domain CJ259_RS04625 PF00005 ABC transporter CJ259_RS04630 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS04635 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS04640 PF07883 Cupin domain CJ259_RS04645 PF01177 Asp/Glu/Hydantoin racemase CJ259_RS04650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS04650 PF03466 LysR substrate binding domain CJ259_RS04655 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJ259_RS04655 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJ259_RS04660 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS04665 PF02378 Phosphotransferase system, EIIC CJ259_RS04670 PF00232 Glycosyl hydrolase family 1 CJ259_RS04675 PF07729 FCD domain CJ259_RS04675 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS04685 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS04700 PF00501 AMP-binding enzyme CJ259_RS04700 PF01553 Acyltransferase CJ259_RS04705 PF07690 Major Facilitator Superfamily CJ259_RS04710 PF00248 Aldo/keto reductase family CJ259_RS04715 PF06004 Bacterial protein of unknown function (DUF903) CJ259_RS04720 PF03741 Integral membrane protein TerC family CJ259_RS04725 PF02976 DNA mismatch repair enzyme MutH CJ259_RS04730 PF00293 NUDIX domain CJ259_RS04735 PF01590 GAF domain CJ259_RS04735 PF05524 PEP-utilising enzyme, N-terminal CJ259_RS04735 PF00391 PEP-utilising enzyme, mobile domain CJ259_RS04735 PF02896 PEP-utilising enzyme, TIM barrel domain CJ259_RS04740 PF01790 Prolipoprotein diacylglyceryl transferase CJ259_RS04745 PF00303 Thymidylate synthase CJ259_RS04750 PF07963 Prokaryotic N-terminal methylation motif CJ259_RS04755 PF07963 Prokaryotic N-terminal methylation motif CJ259_RS04760 PF10713 Protein of unknown function (DUF2509) CJ259_RS04765 PF07963 Prokaryotic N-terminal methylation motif CJ259_RS04765 PF12528 Type II secretion prepilin peptidase dependent protein C CJ259_RS04770 PF17946 RecC C-terminal domain CJ259_RS04780 PF00580 UvrD/REP helicase N-terminal domain CJ259_RS04780 PF12705 PD-(D/E)XK nuclease superfamily CJ259_RS04780 PF13361 UvrD-like helicase C-terminal domain CJ259_RS04785 PF13538 UvrD-like helicase C-terminal domain CJ259_RS04795 PF00696 Amino acid kinase family CJ259_RS04795 PF00583 Acetyltransferase (GNAT) family CJ259_RS04800 PF11741 AMIN domain CJ259_RS04800 PF01520 N-acetylmuramoyl-L-alanine amidase CJ259_RS04805 PF00155 Aminotransferase class I and II CJ259_RS04810 PF00288 GHMP kinases N terminal domain CJ259_RS04815 PF00871 Acetokinase family CJ259_RS04820 PF10662 Ethanolamine utilisation - propanediol utilisation CJ259_RS04825 PF00936 BMC domain CJ259_RS04835 PF10531 SLBB domain CJ259_RS04835 PF13375 RnfC Barrel sandwich hybrid domain CJ259_RS04835 PF13237 4Fe-4S dicluster domain CJ259_RS04835 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CJ259_RS04840 PF00465 Iron-containing alcohol dehydrogenase CJ259_RS04840 PF00171 Aldehyde dehydrogenase family CJ259_RS04845 PF00171 Aldehyde dehydrogenase family CJ259_RS04850 PF01923 Cobalamin adenosyltransferase CJ259_RS04855 PF03319 Ethanolamine utilisation protein EutN/carboxysome CJ259_RS04865 PF06130 Phosphate propanoyltransferase CJ259_RS04870 PF00936 BMC domain CJ259_RS04875 PF00936 BMC domain CJ259_RS04885 PF08841 Diol dehydratase reactivase ATPase-like domain CJ259_RS04885 PF18427 DD-reactivating factor swiveling domain CJ259_RS04890 PF02287 Dehydratase small subunit CJ259_RS04895 PF02288 Dehydratase medium subunit CJ259_RS04900 PF02286 Dehydratase large subunit CJ259_RS04905 PF00936 BMC domain CJ259_RS04910 PF00936 BMC domain CJ259_RS04915 PF00230 Major intrinsic protein CJ259_RS04920 PF10114 Sensory domain found in PocR CJ259_RS04920 PF12833 Helix-turn-helix domain CJ259_RS04925 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CJ259_RS04925 PF07685 CobB/CobQ-like glutamine amidotransferase domain CJ259_RS04930 PF03186 CobD/Cbib protein CJ259_RS04935 PF02570 Precorrin-8X methylmutase CJ259_RS04940 PF01888 CbiD CJ259_RS04945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJ259_RS04950 PF05175 Methyltransferase small domain CJ259_RS04955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJ259_RS04960 PF11761 Cobalamin biosynthesis central region CJ259_RS04960 PF01890 Cobalamin synthesis G C-terminus CJ259_RS04960 PF11760 Cobalamin synthesis G N-terminal CJ259_RS04965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJ259_RS04970 PF02571 Precorrin-6x reductase CbiJ/CobK CJ259_RS04975 PF06180 Cobalt chelatase (CbiK) CJ259_RS04980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJ259_RS04985 PF01891 Cobalt uptake substrate-specific transmembrane region CJ259_RS04990 PF02553 Cobalt transport protein component CbiN CJ259_RS04995 PF02361 Cobalt transport protein CJ259_RS05000 PF00005 ABC transporter CJ259_RS05005 PF07685 CobB/CobQ-like glutamine amidotransferase domain CJ259_RS05010 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CJ259_RS05015 PF02277 Phosphoribosyltransferase CJ259_RS05085 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CJ259_RS05085 PF13296 Putative type VI secretion system Rhs element Vgr CJ259_RS05085 PF04717 Type VI secretion system, phage-baseplate injector CJ259_RS05090 PF13488 Glycine zipper CJ259_RS05090 PF00691 OmpA family CJ259_RS05125 PF03562 MltA specific insert domain CJ259_RS05125 PF06725 3D domain CJ259_RS05130 PF00899 ThiF family CJ259_RS05135 PF02657 Fe-S metabolism associated domain CJ259_RS05140 PF00266 Aminotransferase class-V CJ259_RS05145 PF06004 Bacterial protein of unknown function (DUF903) CJ259_RS05150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS05150 PF03466 LysR substrate binding domain CJ259_RS05155 PF04241 Protein of unknown function (DUF423) CJ259_RS05160 PF18125 RlmM ferredoxin-like domain CJ259_RS05160 PF01728 FtsJ-like methyltransferase CJ259_RS05165 PF08220 DeoR-like helix-turn-helix domain CJ259_RS05165 PF00455 DeoR C terminal sensor domain CJ259_RS05170 PF05025 RbsD / FucU transport protein family CJ259_RS05175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJ259_RS05175 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJ259_RS05180 PF07882 L-fucose isomerase, second N-terminal domain CJ259_RS05180 PF07881 L-fucose isomerase, first N-terminal domain CJ259_RS05180 PF02952 L-fucose isomerase, C-terminal domain CJ259_RS05185 PF07690 Major Facilitator Superfamily CJ259_RS05190 PF00596 Class II Aldolase and Adducin N-terminal domain CJ259_RS05195 PF00465 Iron-containing alcohol dehydrogenase CJ259_RS05200 PF01367 5'-3' exonuclease, C-terminal SAM fold CJ259_RS05200 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CJ259_RS05205 PF00158 Sigma-54 interaction domain CJ259_RS05210 PF00296 Luciferase-like monooxygenase CJ259_RS05220 PF00296 Luciferase-like monooxygenase CJ259_RS05225 PF00005 ABC transporter CJ259_RS05230 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS05235 PF03180 NLPA lipoprotein CJ259_RS05245 PF07690 Major Facilitator Superfamily CJ259_RS05255 PF09084 NMT1/THI5 like CJ259_RS05260 PF03315 Serine dehydratase beta chain CJ259_RS05260 PF03313 Serine dehydratase alpha chain CJ259_RS05270 PF11892 Domain of unknown function (DUF3412) CJ259_RS05270 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CJ259_RS05270 PF03641 Possible lysine decarboxylase CJ259_RS05275 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CJ259_RS05275 PF14489 QueF-like protein CJ259_RS05280 PF07348 Syd protein (SUKH-2) CJ259_RS05285 PF04287 tRNA pseudouridine synthase C CJ259_RS05290 PF00849 RNA pseudouridylate synthase CJ259_RS05295 PF00258 Flavodoxin CJ259_RS05300 PF07690 Major Facilitator Superfamily CJ259_RS05305 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJ259_RS05305 PF13378 Enolase C-terminal domain-like CJ259_RS05310 PF13378 Enolase C-terminal domain-like CJ259_RS05315 PF02595 Glycerate kinase family CJ259_RS05320 PF00672 HAMP domain CJ259_RS05320 PF01627 Hpt domain CJ259_RS05320 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS05320 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CJ259_RS05320 PF00072 Response regulator receiver domain CJ259_RS05320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS05325 PF01938 TRAM domain CJ259_RS05325 PF05958 tRNA (Uracil-5-)-methyltransferase CJ259_RS05330 PF13291 ACT domain CJ259_RS05330 PF02824 TGS domain CJ259_RS05330 PF04607 Region found in RelA / SpoT proteins CJ259_RS05335 PF03819 MazG nucleotide pyrophosphohydrolase domain CJ259_RS05340 PF00117 Glutamine amidotransferase class-I CJ259_RS05340 PF06418 CTP synthase N-terminus CJ259_RS05345 PF03952 Enolase, N-terminal domain CJ259_RS05345 PF00113 Enolase, C-terminal TIM barrel domain CJ259_RS05355 PF04055 Radical SAM superfamily CJ259_RS05360 PF01242 6-pyruvoyl tetrahydropterin synthase CJ259_RS05365 PF00175 Oxidoreductase NAD-binding domain CJ259_RS05365 PF00258 Flavodoxin CJ259_RS05365 PF00667 FAD binding domain CJ259_RS05370 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJ259_RS05370 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJ259_RS05375 PF01507 Phosphoadenosine phosphosulfate reductase family CJ259_RS05380 PF04389 Peptidase family M28 CJ259_RS05385 PF10414 Sirohaem synthase dimerisation region CJ259_RS05385 PF14824 Sirohaem biosynthesis protein central CJ259_RS05385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJ259_RS05390 PF01507 Phosphoadenosine phosphosulfate reductase family CJ259_RS05395 PF00009 Elongation factor Tu GTP binding domain CJ259_RS05405 PF12084 Protein of unknown function (DUF3561) CJ259_RS05410 PF04977 Septum formation initiator CJ259_RS05415 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CJ259_RS05420 PF02542 YgbB family CJ259_RS05425 PF01142 tRNA pseudouridine synthase D (TruD) CJ259_RS05430 PF01975 Survival protein SurE CJ259_RS05440 PF01476 LysM domain CJ259_RS05440 PF01551 Peptidase family M23 CJ259_RS05445 PF04542 Sigma-70 region 2 CJ259_RS05445 PF04539 Sigma-70 region 3 CJ259_RS05445 PF04545 Sigma-70, region 4 CJ259_RS05445 PF00140 Sigma-70 factor, region 1.2 CJ259_RS05455 PF07690 Major Facilitator Superfamily CJ259_RS05460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS05460 PF03466 LysR substrate binding domain CJ259_RS05465 PF01047 MarR family CJ259_RS05470 PF02441 Flavoprotein CJ259_RS05475 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CJ259_RS05490 PF01848 Hok/gef family CJ259_RS05495 PF00488 MutS domain V CJ259_RS05495 PF01624 MutS domain I CJ259_RS05495 PF05188 MutS domain II CJ259_RS05495 PF05190 MutS family domain IV CJ259_RS05495 PF05192 MutS domain III CJ259_RS05500 PF00589 Phage integrase family CJ259_RS05500 PF13356 Arm DNA-binding domain CJ259_RS05545 PF07693 KAP family P-loop domain CJ259_RS05565 PF00005 ABC transporter CJ259_RS05570 PF01032 FecCD transport family CJ259_RS05575 PF01497 Periplasmic binding protein CJ259_RS05580 PF05171 Haemin-degrading HemS.ChuX domain CJ259_RS05585 PF07715 TonB-dependent Receptor Plug Domain CJ259_RS05585 PF00593 TonB dependent receptor CJ259_RS05595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJ259_RS05595 PF00205 Thiamine pyrophosphate enzyme, central domain CJ259_RS05595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJ259_RS05600 PF03547 Membrane transport protein CJ259_RS05610 PF11756 Nitrous oxide-stimulated promoter CJ259_RS05615 PF00950 ABC 3 transport family CJ259_RS05620 PF00950 ABC 3 transport family CJ259_RS05625 PF00005 ABC transporter CJ259_RS05630 PF01297 Zinc-uptake complex component A periplasmic CJ259_RS05635 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS05640 PF00480 ROK family CJ259_RS05645 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CJ259_RS05650 PF02378 Phosphotransferase system, EIIC CJ259_RS05655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJ259_RS05660 PF02378 Phosphotransferase system, EIIC CJ259_RS05670 PF02264 LamB porin CJ259_RS05680 PF00232 Glycosyl hydrolase family 1 CJ259_RS05685 PF02954 Bacterial regulatory protein, Fis family CJ259_RS05685 PF00158 Sigma-54 interaction domain CJ259_RS05685 PF01590 GAF domain CJ259_RS05690 PF02769 AIR synthase related protein, C-terminal domain CJ259_RS05690 PF00586 AIR synthase related protein, N-terminal domain CJ259_RS05695 PF01924 Hydrogenase formation hypA family CJ259_RS05700 PF01455 HupF/HypC family CJ259_RS05705 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJ259_RS05710 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CJ259_RS05715 PF11046 Transcriptional repressor of hyc and hyp operons CJ259_RS05725 PF13247 4Fe-4S dicluster domain CJ259_RS05730 PF00361 Proton-conducting membrane transporter CJ259_RS05735 PF00146 NADH dehydrogenase CJ259_RS05740 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CJ259_RS05740 PF00374 Nickel-dependent hydrogenase CJ259_RS05740 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CJ259_RS05745 PF12838 4Fe-4S dicluster domain CJ259_RS05750 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CJ259_RS05755 PF07450 Formate hydrogenlyase maturation protein HycH CJ259_RS05760 PF01750 Hydrogenase maturation protease CJ259_RS05765 PF08845 Toxin SymE, type I toxin-antitoxin system CJ259_RS05770 PF00232 Glycosyl hydrolase family 1 CJ259_RS05775 PF00367 phosphotransferase system, EIIB CJ259_RS05775 PF02378 Phosphotransferase system, EIIC CJ259_RS05780 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS05785 PF12800 4Fe-4S binding domain CJ259_RS05785 PF13247 4Fe-4S dicluster domain CJ259_RS05790 PF17788 HypF Kae1-like domain CJ259_RS05790 PF00708 Acylphosphatase CJ259_RS05790 PF01300 Telomere recombination CJ259_RS05790 PF07503 HypF finger CJ259_RS05795 PF03824 High-affinity nickel-transport protein CJ259_RS05800 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ259_RS05800 PF18113 Rubredoxin binding C-terminal domain CJ259_RS05805 PF00753 Metallo-beta-lactamase superfamily CJ259_RS05805 PF00258 Flavodoxin CJ259_RS05805 PF00301 Rubredoxin CJ259_RS05815 PF00158 Sigma-54 interaction domain CJ259_RS05815 PF01590 GAF domain CJ259_RS05820 PF01380 SIS domain CJ259_RS05820 PF00571 CBS domain CJ259_RS05825 PF00455 DeoR C terminal sensor domain CJ259_RS05825 PF08220 DeoR-like helix-turn-helix domain CJ259_RS05830 PF06923 Glucitol operon activator protein (GutM) CJ259_RS05835 PF00106 short chain dehydrogenase CJ259_RS05840 PF03829 PTS system glucitol/sorbitol-specific IIA component CJ259_RS05845 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CJ259_RS05845 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CJ259_RS05850 PF03608 PTS system enzyme II sorbitol-specific factor CJ259_RS05855 PF13406 Transglycosylase SLT domain CJ259_RS05865 PF00005 ABC transporter CJ259_RS05870 PF00950 ABC 3 transport family CJ259_RS05875 PF01297 Zinc-uptake complex component A periplasmic CJ259_RS05880 PF02464 Competence-damaged protein CJ259_RS05885 PF00154 recA bacterial DNA recombination protein CJ259_RS05890 PF02631 RecX family CJ259_RS05895 PF02272 DHHA1 domain CJ259_RS05895 PF01411 tRNA synthetases class II (A) CJ259_RS05895 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJ259_RS05905 PF02599 Global regulator protein family CJ259_RS05935 PF04972 BON domain CJ259_RS05940 PF13419 Haloacid dehalogenase-like hydrolase CJ259_RS05945 PF09335 SNARE associated Golgi protein CJ259_RS05950 PF04262 Glutamate-cysteine ligase CJ259_RS05955 PF02664 S-Ribosylhomocysteinase (LuxS) CJ259_RS05960 PF12852 Cupin CJ259_RS05960 PF12833 Helix-turn-helix domain CJ259_RS05965 PF08502 LeuA allosteric (dimerisation) domain CJ259_RS05965 PF00682 HMGL-like CJ259_RS05970 PF07690 Major Facilitator Superfamily CJ259_RS05975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJ259_RS05975 PF00529 HlyD membrane-fusion protein of T1SS CJ259_RS05980 PF01047 MarR family CJ259_RS05985 PF05437 Branched-chain amino acid transport protein (AzlD) CJ259_RS05990 PF03591 AzlC protein CJ259_RS05995 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CJ259_RS06000 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS06005 PF00571 CBS domain CJ259_RS06005 PF00005 ABC transporter CJ259_RS06010 PF00268 Ribonucleotide reductase, small chain CJ259_RS06015 PF00317 Ribonucleotide reductase, all-alpha domain CJ259_RS06015 PF02867 Ribonucleotide reductase, barrel domain CJ259_RS06015 PF08343 Ribonucleotide reductase N-terminal CJ259_RS06020 PF07972 NrdI Flavodoxin like CJ259_RS06025 PF00462 Glutaredoxin CJ259_RS06030 PF02627 Carboxymuconolactone decarboxylase family CJ259_RS06035 PF00155 Aminotransferase class I and II CJ259_RS06035 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS06040 PF05957 Bacterial protein of unknown function (DUF883) CJ259_RS06045 PF09400 Protein of unknown function (DUF2002) CJ259_RS06050 PF06610 L-alanine exporter CJ259_RS06065 PF00816 H-NS histone family CJ259_RS06085 PF01022 Bacterial regulatory protein, arsR family CJ259_RS06090 PF02525 Flavodoxin-like fold CJ259_RS06095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS06095 PF03466 LysR substrate binding domain CJ259_RS06100 PF00158 Sigma-54 interaction domain CJ259_RS06100 PF02954 Bacterial regulatory protein, Fis family CJ259_RS06100 PF01590 GAF domain CJ259_RS06105 PF00171 Aldehyde dehydrogenase family CJ259_RS06110 PF16970 Type-1 fimbrial protein, A CJ259_RS06115 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJ259_RS06115 PF02753 Pili assembly chaperone PapD, C-terminal domain CJ259_RS06120 PF13954 PapC N-terminal domain CJ259_RS06120 PF00577 Outer membrane usher protein CJ259_RS06120 PF13953 PapC C-terminal domain CJ259_RS06135 PF00577 Outer membrane usher protein CJ259_RS06135 PF13954 PapC N-terminal domain CJ259_RS06135 PF13953 PapC C-terminal domain CJ259_RS06140 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJ259_RS06140 PF02753 Pili assembly chaperone PapD, C-terminal domain CJ259_RS06145 PF00419 Fimbrial protein CJ259_RS06150 PF00072 Response regulator receiver domain CJ259_RS06150 PF00196 Bacterial regulatory proteins, luxR family CJ259_RS06165 PF00106 short chain dehydrogenase CJ259_RS06170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJ259_RS06175 PF00596 Class II Aldolase and Adducin N-terminal domain CJ259_RS06180 PF00005 ABC transporter CJ259_RS06185 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ259_RS06200 PF00491 Arginase family CJ259_RS06205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS06205 PF03466 LysR substrate binding domain CJ259_RS06215 PF00873 AcrB/AcrD/AcrF family CJ259_RS06220 PF00529 HlyD membrane-fusion protein of T1SS CJ259_RS06220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJ259_RS06225 PF06445 GyrI-like small molecule binding domain CJ259_RS06225 PF12833 Helix-turn-helix domain CJ259_RS06255 PF13333 Integrase core domain CJ259_RS06255 PF00665 Integrase core domain CJ259_RS06255 PF13276 HTH-like domain CJ259_RS06270 PF00589 Phage integrase family CJ259_RS06270 PF13356 Arm DNA-binding domain CJ259_RS06280 PF01668 SmpB protein CJ259_RS06285 PF03364 Polyketide cyclase / dehydrase and lipid transport CJ259_RS06290 PF03658 RnfH family Ubiquitin CJ259_RS06295 PF04355 SmpA / OmlA family CJ259_RS06300 PF02463 RecF/RecN/SMC N terminal domain CJ259_RS06305 PF01513 ATP-NAD kinase CJ259_RS06315 PF01025 GrpE CJ259_RS06320 PF01595 Cyclin M transmembrane N-terminal domain CJ259_RS06320 PF03471 Transporter associated domain CJ259_RS06320 PF00571 CBS domain CJ259_RS06325 PF01578 Cytochrome C assembly protein CJ259_RS06330 PF02978 Signal peptide binding domain CJ259_RS06330 PF00448 SRP54-type protein, GTPase domain CJ259_RS06330 PF02881 SRP54-type protein, helical bundle domain CJ259_RS06335 PF00886 Ribosomal protein S16 CJ259_RS06340 PF01782 RimM N-terminal domain CJ259_RS06340 PF05239 PRC-barrel domain CJ259_RS06345 PF01746 tRNA (Guanine-1)-methyltransferase CJ259_RS06350 PF01245 Ribosomal protein L19 CJ259_RS06365 PF00691 OmpA family CJ259_RS06370 PF00990 Diguanylate cyclase, GGDEF domain CJ259_RS06370 PF17152 Periplasmic sensor domain CJ259_RS06375 PF13689 YfiR/HmsC-like CJ259_RS06380 PF00793 DAHP synthetase I family CJ259_RS06385 PF01817 Chorismate mutase type II CJ259_RS06385 PF02153 Prephenate dehydrogenase CJ259_RS06390 PF08450 SMP-30/Gluconolactonase/LRE-like region CJ259_RS06395 PF01817 Chorismate mutase type II CJ259_RS06395 PF00800 Prephenate dehydratase CJ259_RS06405 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CJ259_RS06410 PF13525 Outer membrane lipoprotein CJ259_RS06415 PF01479 S4 domain CJ259_RS06415 PF00849 RNA pseudouridylate synthase CJ259_RS06420 PF02578 Multi-copper polyphenol oxidoreductase laccase CJ259_RS06425 PF00004 ATPase family associated with various cellular activities (AAA) CJ259_RS06425 PF10431 C-terminal, D2-small domain, of ClpB protein CJ259_RS06425 PF07724 AAA domain (Cdc48 subfamily) CJ259_RS06425 PF17871 AAA lid domain CJ259_RS06425 PF02861 Clp amino terminal domain, pathogenicity island component CJ259_RS06450 PF00083 Sugar (and other) transporter CJ259_RS06455 PF10043 Predicted periplasmic lipoprotein (DUF2279) CJ259_RS06460 PF13091 PLD-like domain CJ259_RS06465 PF13380 CoA binding domain CJ259_RS06465 PF00583 Acetyltransferase (GNAT) family CJ259_RS06465 PF13607 Succinyl-CoA ligase like flavodoxin domain CJ259_RS06470 PF03942 DTW domain CJ259_RS06475 PF00085 Thioredoxin CJ259_RS06480 PF00588 SpoU rRNA Methylase family CJ259_RS06480 PF08032 RNA 2'-O ribose methyltransferase substrate binding CJ259_RS06485 PF03167 Uracil DNA glycosylase superfamily CJ259_RS06490 PF01228 Glycine radical CJ259_RS06495 PF00271 Helicase conserved C-terminal domain CJ259_RS06495 PF00270 DEAD/DEAH box helicase CJ259_RS06500 PF05175 Methyltransferase small domain CJ259_RS06505 PF02910 Fumarate reductase flavoprotein C-term CJ259_RS06505 PF00890 FAD binding domain CJ259_RS06510 PF04542 Sigma-70 region 2 CJ259_RS06510 PF08281 Sigma-70, region 4 CJ259_RS06515 PF03872 Anti sigma-E protein RseA, N-terminal domain CJ259_RS06515 PF03873 Anti sigma-E protein RseA, C-terminal domain CJ259_RS06520 PF17188 MucB/RseB C-terminal domain CJ259_RS06520 PF03888 MucB/RseB N-terminal domain CJ259_RS06530 PF00009 Elongation factor Tu GTP binding domain CJ259_RS06530 PF00679 Elongation factor G C-terminus CJ259_RS06530 PF03144 Elongation factor Tu domain 2 CJ259_RS06530 PF06421 GTP-binding protein LepA C-terminus CJ259_RS06535 PF10502 Signal peptidase, peptidase S26 CJ259_RS06540 PF00035 Double-stranded RNA binding motif CJ259_RS06540 PF14622 Ribonuclease-III-like CJ259_RS06545 PF07650 KH domain CJ259_RS06545 PF01926 50S ribosome-binding GTPase CJ259_RS06550 PF02565 Recombination protein O C terminal CJ259_RS06550 PF11967 Recombination protein O N terminal CJ259_RS06555 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CJ259_RS06560 PF01648 4'-phosphopantetheinyl transferase superfamily CJ259_RS06565 PF12838 4Fe-4S dicluster domain CJ259_RS06570 PF01418 Helix-turn-helix domain, rpiR family CJ259_RS06570 PF01380 SIS domain CJ259_RS06580 PF14437 MafB19-like deaminase CJ259_RS06585 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ259_RS06585 PF01464 Transglycosylase SLT domain CJ259_RS06590 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CJ259_RS06590 PF02769 AIR synthase related protein, C-terminal domain CJ259_RS06590 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CJ259_RS06595 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS06595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS06600 PF13942 YfhG lipoprotein CJ259_RS06605 PF00072 Response regulator receiver domain CJ259_RS06605 PF00158 Sigma-54 interaction domain CJ259_RS06610 PF00543 Nitrogen regulatory protein P-II CJ259_RS06615 PF00970 Oxidoreductase FAD-binding domain CJ259_RS06615 PF00175 Oxidoreductase NAD-binding domain CJ259_RS06615 PF00042 Globin CJ259_RS06625 PF00464 Serine hydroxymethyltransferase CJ259_RS06630 PF07681 DoxX CJ259_RS06635 PF00480 ROK family CJ259_RS06640 PF17128 Domain of unknown function (DUF5107) CJ259_RS06640 PF13181 Tetratricopeptide repeat CJ259_RS06645 PF00083 Sugar (and other) transporter CJ259_RS06650 PF01263 Aldose 1-epimerase CJ259_RS06655 PF12832 MFS_1 like family CJ259_RS06660 PF00874 PRD domain CJ259_RS06665 PF06226 Protein of unknown function (DUF1007) CJ259_RS06670 PF03824 High-affinity nickel-transport protein CJ259_RS06680 PF00459 Inositol monophosphatase family CJ259_RS06685 PF00588 SpoU rRNA Methylase family CJ259_RS06690 PF02082 Transcriptional regulator CJ259_RS06695 PF00266 Aminotransferase class-V CJ259_RS06700 PF01592 NifU-like N terminal domain CJ259_RS06705 PF01521 Iron-sulphur cluster biosynthesis CJ259_RS06710 PF00226 DnaJ domain CJ259_RS06710 PF07743 HSCB C-terminal oligomerisation domain CJ259_RS06715 PF00012 Hsp70 protein CJ259_RS06720 PF00111 2Fe-2S iron-sulfur cluster binding domain CJ259_RS06725 PF04384 Iron-sulphur cluster assembly CJ259_RS06730 PF12404 Peptidase CJ259_RS06730 PF00883 Cytosol aminopeptidase family, catalytic domain CJ259_RS06735 PF07179 SseB protein N-terminal domain CJ259_RS06735 PF14581 SseB protein C-terminal domain CJ259_RS06745 PF00581 Rhodanese-like domain CJ259_RS06750 PF00207 Alpha-2-macroglobulin family CJ259_RS06750 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CJ259_RS06750 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CJ259_RS06750 PF07678 A-macroglobulin TED domain CJ259_RS06750 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CJ259_RS06750 PF07703 Alpha-2-macroglobulin bait region domain CJ259_RS06750 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CJ259_RS06750 PF01835 MG2 domain CJ259_RS06750 PF17962 Bacterial macroglobulin domain 6 CJ259_RS06755 PF06832 Penicillin-Binding Protein C-terminus Family CJ259_RS06755 PF00912 Transglycosylase CJ259_RS06755 PF00905 Penicillin binding protein transpeptidase domain CJ259_RS06760 PF00334 Nucleoside diphosphate kinase CJ259_RS06770 PF04055 Radical SAM superfamily CJ259_RS06775 PF13464 Domain of unknown function (DUF4115) CJ259_RS06780 PF04551 GcpE protein CJ259_RS06785 PF13393 Histidyl-tRNA synthetase CJ259_RS06785 PF03129 Anticodon binding domain CJ259_RS06790 PF09976 Tetratricopeptide repeat-like domain CJ259_RS06795 PF13360 PQQ-like domain CJ259_RS06800 PF01926 50S ribosome-binding GTPase CJ259_RS06800 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CJ259_RS06810 PF07191 zinc-ribbons CJ259_RS06815 PF02601 Exonuclease VII, large subunit CJ259_RS06815 PF13742 OB-fold nucleic acid binding domain CJ259_RS06820 PF00571 CBS domain CJ259_RS06820 PF00478 IMP dehydrogenase / GMP reductase domain CJ259_RS06825 PF00117 Glutamine amidotransferase class-I CJ259_RS06825 PF02540 NAD synthase CJ259_RS06825 PF00958 GMP synthase C terminal domain CJ259_RS06840 PF02463 RecF/RecN/SMC N terminal domain CJ259_RS06845 PF00580 UvrD/REP helicase N-terminal domain CJ259_RS06845 PF13361 UvrD-like helicase C-terminal domain CJ259_RS06860 PF00884 Sulfatase CJ259_RS06865 PF13186 Iron-sulfur cluster-binding domain CJ259_RS06865 PF04055 Radical SAM superfamily CJ259_RS06875 PF03466 LysR substrate binding domain CJ259_RS06875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS06880 PF11119 Protein of unknown function (DUF2633) CJ259_RS06885 PF00563 EAL domain CJ259_RS06885 PF05231 MASE1 CJ259_RS06890 PF02541 Ppx/GppA phosphatase family CJ259_RS06895 PF02503 Polyphosphate kinase middle domain CJ259_RS06895 PF13089 Polyphosphate kinase N-terminal domain CJ259_RS06895 PF17941 Polyphosphate kinase C-terminal domain 1 CJ259_RS06895 PF13090 Polyphosphate kinase C-terminal domain 2 CJ259_RS06900 PF00551 Formyl transferase CJ259_RS06905 PF00586 AIR synthase related protein, N-terminal domain CJ259_RS06905 PF02769 AIR synthase related protein, C-terminal domain CJ259_RS06910 PF00480 ROK family CJ259_RS06915 PF00232 Glycosyl hydrolase family 1 CJ259_RS06925 PF00860 Permease family CJ259_RS06930 PF00308 Bacterial dnaA protein CJ259_RS06940 PF03960 ArsC family CJ259_RS06945 PF01435 Peptidase family M48 CJ259_RS06950 PF01594 AI-2E family transporter CJ259_RS06955 PF00578 AhpC/TSA family CJ259_RS06960 PF01842 ACT domain CJ259_RS06965 PF00701 Dihydrodipicolinate synthetase family CJ259_RS06970 PF06804 NlpB/DapX lipoprotein CJ259_RS06975 PF01259 SAICAR synthetase CJ259_RS06980 PF04228 Putative neutral zinc metallopeptidase CJ259_RS06985 PF08351 Domain of unknown function (DUF1726) CJ259_RS06985 PF13718 GNAT acetyltransferase 2 CJ259_RS06985 PF05127 Helicase CJ259_RS06985 PF17176 tRNA-binding domain CJ259_RS06990 PF02230 Phospholipase/Carboxylesterase CJ259_RS06995 PF13980 Uncharacterised protein family (UPF0370) CJ259_RS07000 PF01546 Peptidase family M20/M25/M40 CJ259_RS07000 PF07687 Peptidase dimerisation domain CJ259_RS07005 PF03960 ArsC family CJ259_RS07015 PF00873 AcrB/AcrD/AcrF family CJ259_RS07025 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ259_RS07025 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJ259_RS07025 PF13247 4Fe-4S dicluster domain CJ259_RS07030 PF00293 NUDIX domain CJ259_RS07035 PF06674 Protein of unknown function (DUF1176) CJ259_RS07040 PF00456 Transketolase, thiamine diphosphate binding domain CJ259_RS07040 PF02779 Transketolase, pyrimidine binding domain CJ259_RS07040 PF02780 Transketolase, C-terminal domain CJ259_RS07045 PF00923 Transaldolase/Fructose-6-phosphate aldolase CJ259_RS07050 PF03949 Malic enzyme, NAD binding domain CJ259_RS07050 PF00390 Malic enzyme, N-terminal domain CJ259_RS07050 PF01515 Phosphate acetyl/butaryl transferase CJ259_RS07055 PF00936 BMC domain CJ259_RS07060 PF10662 Ethanolamine utilisation - propanediol utilisation CJ259_RS07065 PF06249 Ethanolamine utilisation protein EutQ CJ259_RS07070 PF01923 Cobalamin adenosyltransferase CJ259_RS07075 PF01515 Phosphate acetyl/butaryl transferase CJ259_RS07080 PF00936 BMC domain CJ259_RS07085 PF03319 Ethanolamine utilisation protein EutN/carboxysome CJ259_RS07090 PF00171 Aldehyde dehydrogenase family CJ259_RS07100 PF00465 Iron-containing alcohol dehydrogenase CJ259_RS07105 PF04346 Ethanolamine utilisation protein, EutH CJ259_RS07110 PF06277 Ethanolamine utilisation protein EutA CJ259_RS07115 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CJ259_RS07120 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CJ259_RS07125 PF00936 BMC domain CJ259_RS07130 PF16365 Ethanolamine utilization protein EutK C-terminus CJ259_RS07130 PF00936 BMC domain CJ259_RS07135 PF12833 Helix-turn-helix domain CJ259_RS07140 PF01218 Coproporphyrinogen III oxidase CJ259_RS07145 PF01520 N-acetylmuramoyl-L-alanine amidase CJ259_RS07150 PF00583 Acetyltransferase (GNAT) family CJ259_RS07155 PF11143 Protein of unknown function (DUF2919) CJ259_RS07160 PF06572 Protein of unknown function (DUF1131) CJ259_RS07165 PF04261 Dyp-type peroxidase family CJ259_RS07180 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS07185 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS07190 PF00005 ABC transporter CJ259_RS07195 PF00291 Pyridoxal-phosphate dependent enzyme CJ259_RS07200 PF13474 SnoaL-like domain CJ259_RS07205 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS07205 PF00155 Aminotransferase class I and II CJ259_RS07210 PF08543 Phosphomethylpyrimidine kinase CJ259_RS07220 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CJ259_RS07225 PF05524 PEP-utilising enzyme, N-terminal CJ259_RS07225 PF02896 PEP-utilising enzyme, TIM barrel domain CJ259_RS07225 PF00391 PEP-utilising enzyme, mobile domain CJ259_RS07230 PF00381 PTS HPr component phosphorylation site CJ259_RS07235 PF00291 Pyridoxal-phosphate dependent enzyme CJ259_RS07245 PF04354 ZipA, C-terminal FtsZ-binding domain CJ259_RS07250 PF03120 NAD-dependent DNA ligase OB-fold domain CJ259_RS07250 PF00533 BRCA1 C Terminus (BRCT) domain CJ259_RS07250 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CJ259_RS07250 PF12826 Helix-hairpin-helix motif CJ259_RS07250 PF01653 NAD-dependent DNA ligase adenylation domain CJ259_RS07260 PF13593 SBF-like CPA transporter family (DUF4137) CJ259_RS07265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS07265 PF03466 LysR substrate binding domain CJ259_RS07295 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJ259_RS07300 PF07037 Putative transcription regulator (DUF1323) CJ259_RS07305 PF07037 Putative transcription regulator (DUF1323) CJ259_RS07320 PF05231 MASE1 CJ259_RS07320 PF00563 EAL domain CJ259_RS07325 PF01773 Na+ dependent nucleoside transporter N-terminus CJ259_RS07325 PF07670 Nucleoside recognition CJ259_RS07325 PF07662 Na+ dependent nucleoside transporter C-terminus CJ259_RS07330 PF01566 Natural resistance-associated macrophage protein CJ259_RS07335 PF10697 Protein of unknown function (DUF2502) CJ259_RS07340 PF00248 Aldo/keto reductase family CJ259_RS07345 PF00205 Thiamine pyrophosphate enzyme, central domain CJ259_RS07345 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJ259_RS07345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJ259_RS07350 PF00654 Voltage gated chloride channel CJ259_RS07355 PF02685 Glucokinase CJ259_RS07360 PF00072 Response regulator receiver domain CJ259_RS07360 PF04397 LytTr DNA-binding domain CJ259_RS07365 PF07694 5TMR of 5TMR-LYT CJ259_RS07365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS07365 PF06580 Histidine kinase CJ259_RS07375 PF00155 Aminotransferase class I and II CJ259_RS07385 PF07690 Major Facilitator Superfamily CJ259_RS07390 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CJ259_RS07395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS07395 PF03466 LysR substrate binding domain CJ259_RS07415 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CJ259_RS07430 PF00691 OmpA family CJ259_RS07430 PF13488 Glycine zipper CJ259_RS07445 PF13296 Putative type VI secretion system Rhs element Vgr CJ259_RS07445 PF04717 Type VI secretion system, phage-baseplate injector CJ259_RS07445 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CJ259_RS07520 PF04717 Type VI secretion system, phage-baseplate injector CJ259_RS07595 PF13356 Arm DNA-binding domain CJ259_RS07595 PF00589 Phage integrase family CJ259_RS07595 PF14659 Phage integrase, N-terminal SAM-like domain CJ259_RS07670 PF02086 D12 class N6 adenine-specific DNA methyltransferase CJ259_RS07675 PF05866 Endodeoxyribonuclease RusA CJ259_RS07680 PF06147 Protein of unknown function (DUF968) CJ259_RS07715 PF00182 Chitinase class I CJ259_RS07745 PF03354 Phage Terminase CJ259_RS07800 PF13974 YebO-like protein CJ259_RS07840 PF01757 Acyltransferase family CJ259_RS07845 PF00717 Peptidase S24-like CJ259_RS07850 PF01226 Formate/nitrite transporter CJ259_RS07855 PF04333 MlaA lipoprotein CJ259_RS07860 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CJ259_RS07865 PF04175 Protein of unknown function (DUF406) CJ259_RS07870 PF00108 Thiolase, N-terminal domain CJ259_RS07870 PF02803 Thiolase, C-terminal domain CJ259_RS07875 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJ259_RS07875 PF00378 Enoyl-CoA hydratase/isomerase CJ259_RS07875 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJ259_RS07880 PF00300 Histidine phosphatase superfamily (branch 1) CJ259_RS07885 PF01713 Smr domain CJ259_RS07890 PF05175 Methyltransferase small domain CJ259_RS07895 PF01264 Chorismate synthase CJ259_RS07900 PF03411 Penicillin-insensitive murein endopeptidase CJ259_RS07905 PF01925 Sulfite exporter TauE/SafE CJ259_RS07910 PF04315 Elongation factor P hydroxylase CJ259_RS07915 PF08891 YfcL protein CJ259_RS07920 PF01266 FAD dependent oxidoreductase CJ259_RS07920 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CJ259_RS07925 PF00109 Beta-ketoacyl synthase, N-terminal domain CJ259_RS07925 PF02801 Beta-ketoacyl synthase, C-terminal domain CJ259_RS07930 PF07690 Major Facilitator Superfamily CJ259_RS07940 PF11890 Domain of unknown function (DUF3410) CJ259_RS07940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJ259_RS07940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJ259_RS07945 PF02774 Semialdehyde dehydrogenase, dimerisation domain CJ259_RS07945 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJ259_RS07950 PF01416 tRNA pseudouridine synthase CJ259_RS07955 PF09335 SNARE associated Golgi protein CJ259_RS07960 PF01039 Carboxyl transferase domain CJ259_RS07960 PF17848 Acetyl-coA carboxylase zinc finger domain CJ259_RS07965 PF02875 Mur ligase family, glutamate ligase domain CJ259_RS07965 PF08245 Mur ligase middle domain CJ259_RS07970 PF05036 Sporulation related domain CJ259_RS07975 PF02674 Colicin V production protein CJ259_RS07980 PF00156 Phosphoribosyl transferase domain CJ259_RS07985 PF02441 Flavoprotein CJ259_RS07990 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ259_RS07995 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ259_RS08000 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS08005 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS08010 PF00005 ABC transporter CJ259_RS08015 PF13302 Acetyltransferase (GNAT) domain CJ259_RS08020 PF08338 Domain of unknown function (DUF1731) CJ259_RS08020 PF01370 NAD dependent epimerase/dehydratase family CJ259_RS08025 PF02152 Dihydroneopterin aldolase CJ259_RS08030 PF00043 Glutathione S-transferase, C-terminal domain CJ259_RS08030 PF02798 Glutathione S-transferase, N-terminal domain CJ259_RS08035 PF14834 Glutathione S-transferase, C-terminal domain CJ259_RS08035 PF02798 Glutathione S-transferase, N-terminal domain CJ259_RS08040 PF12850 Calcineurin-like phosphoesterase superfamily domain CJ259_RS08045 PF00293 NUDIX domain CJ259_RS08050 PF01515 Phosphate acetyl/butaryl transferase CJ259_RS08050 PF07085 DRTGG domain CJ259_RS08055 PF00871 Acetokinase family CJ259_RS08060 PF04217 Protein of unknown function, DUF412 CJ259_RS08065 PF03887 YfbU domain CJ259_RS08070 PF13419 Haloacid dehalogenase-like hydrolase CJ259_RS08075 PF02080 TrkA-C domain CJ259_RS08075 PF03600 Citrate transporter CJ259_RS08085 PF00155 Aminotransferase class I and II CJ259_RS08090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS08090 PF03466 LysR substrate binding domain CJ259_RS08105 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CJ259_RS08110 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CJ259_RS08115 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CJ259_RS08115 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CJ259_RS08125 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CJ259_RS08125 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CJ259_RS08125 PF10531 SLBB domain CJ259_RS08130 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CJ259_RS08130 PF01568 Molydopterin dinucleotide binding domain CJ259_RS08130 PF00384 Molybdopterin oxidoreductase CJ259_RS08130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJ259_RS08135 PF00146 NADH dehydrogenase CJ259_RS08140 PF12838 4Fe-4S dicluster domain CJ259_RS08145 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CJ259_RS08150 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CJ259_RS08155 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CJ259_RS08155 PF00361 Proton-conducting membrane transporter CJ259_RS08160 PF00361 Proton-conducting membrane transporter CJ259_RS08165 PF00361 Proton-conducting membrane transporter CJ259_RS08170 PF12706 Beta-lactamase superfamily domain CJ259_RS08175 PF13673 Acetyltransferase (GNAT) domain CJ259_RS08180 PF00425 chorismate binding enzyme CJ259_RS08185 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJ259_RS08185 PF16582 Middle domain of thiamine pyrophosphate CJ259_RS08185 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJ259_RS08190 PF12697 Alpha/beta hydrolase family CJ259_RS08195 PF00378 Enoyl-CoA hydratase/isomerase CJ259_RS08200 PF13378 Enolase C-terminal domain-like CJ259_RS08205 PF00501 AMP-binding enzyme CJ259_RS08205 PF13193 AMP-binding enzyme C-terminal domain CJ259_RS08210 PF00293 NUDIX domain CJ259_RS08215 PF04754 Putative transposase, YhgA-like CJ259_RS08220 PF07437 YfaZ precursor CJ259_RS08225 PF00994 Probable molybdopterin binding domain CJ259_RS08230 PF01614 Bacterial transcriptional regulator CJ259_RS08230 PF09339 IclR helix-turn-helix domain CJ259_RS08235 PF13378 Enolase C-terminal domain-like CJ259_RS08235 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJ259_RS08240 PF07690 Major Facilitator Superfamily CJ259_RS08245 PF03328 HpcH/HpaI aldolase/citrate lyase family CJ259_RS08250 PF13183 4Fe-4S dicluster domain CJ259_RS08250 PF02754 Cysteine-rich domain CJ259_RS08255 PF00890 FAD binding domain CJ259_RS08260 PF01266 FAD dependent oxidoreductase CJ259_RS08260 PF04324 BFD-like [2Fe-2S] binding domain CJ259_RS08265 PF07690 Major Facilitator Superfamily CJ259_RS08270 PF03009 Glycerophosphoryl diester phosphodiesterase family CJ259_RS08280 PF00111 2Fe-2S iron-sulfur cluster binding domain CJ259_RS08285 PF00268 Ribonucleotide reductase, small chain CJ259_RS08290 PF03477 ATP cone domain CJ259_RS08290 PF02867 Ribonucleotide reductase, barrel domain CJ259_RS08290 PF00317 Ribonucleotide reductase, all-alpha domain CJ259_RS08305 PF00521 DNA gyrase/topoisomerase IV, subunit A CJ259_RS08305 PF03989 DNA gyrase C-terminal domain, beta-propeller CJ259_RS08310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS08310 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS08310 PF00072 Response regulator receiver domain CJ259_RS08310 PF09456 RcsC Alpha-Beta-Loop (ABL) CJ259_RS08315 PF00072 Response regulator receiver domain CJ259_RS08315 PF00196 Bacterial regulatory proteins, luxR family CJ259_RS08320 PF01627 Hpt domain CJ259_RS08320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS08320 PF16359 RcsD-ABL domain CJ259_RS08325 PF00267 Gram-negative porin CJ259_RS08330 PF02424 ApbE family CJ259_RS08335 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJ259_RS08335 PF02805 Metal binding domain of Ada CJ259_RS08335 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CJ259_RS08335 PF12833 Helix-turn-helix domain CJ259_RS08340 PF13532 2OG-Fe(II) oxygenase superfamily CJ259_RS08345 PF00005 ABC transporter CJ259_RS08350 PF00571 CBS domain CJ259_RS08350 PF01769 Divalent cation transporter CJ259_RS08350 PF03448 MgtE intracellular N domain CJ259_RS08355 PF01740 STAS domain CJ259_RS08355 PF00916 Sulfate permease family CJ259_RS08360 PF06039 Malate:quinone oxidoreductase (Mqo) CJ259_RS08365 PF03974 Ecotin CJ259_RS08370 PF01594 AI-2E family transporter CJ259_RS08380 PF00884 Sulfatase CJ259_RS08380 PF11893 Domain of unknown function (DUF3413) CJ259_RS08385 PF07208 Protein of unknown function (DUF1414) CJ259_RS08390 PF04245 37-kD nucleoid-associated bacterial protein CJ259_RS08395 PF08220 DeoR-like helix-turn-helix domain CJ259_RS08395 PF00455 DeoR C terminal sensor domain CJ259_RS08400 PF00293 NUDIX domain CJ259_RS08405 PF00144 Beta-lactamase CJ259_RS08415 PF01386 Ribosomal L25p family CJ259_RS08420 PF04851 Type III restriction enzyme, res subunit CJ259_RS08420 PF00271 Helicase conserved C-terminal domain CJ259_RS08425 PF01479 S4 domain CJ259_RS08425 PF00849 RNA pseudouridylate synthase CJ259_RS08430 PF07690 Major Facilitator Superfamily CJ259_RS08435 PF13989 YejG-like protein CJ259_RS08440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ259_RS08440 PF00005 ABC transporter CJ259_RS08445 PF12911 N-terminal TM domain of oligopeptide transport permease C CJ259_RS08445 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS08450 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS08455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ259_RS08460 PF12792 CSS motif domain associated with EAL CJ259_RS08460 PF00563 EAL domain CJ259_RS08465 PF00877 NlpC/P60 family CJ259_RS08470 PF01569 PAP2 superfamily CJ259_RS08475 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJ259_RS08475 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJ259_RS08480 PF08125 Mannitol dehydrogenase C-terminal domain CJ259_RS08480 PF01232 Mannitol dehydrogenase Rossmann domain CJ259_RS08485 PF03786 D-mannonate dehydratase (UxuA) CJ259_RS08490 PF08207 Elongation factor P (EF-P) KOW-like domain CJ259_RS08490 PF01132 Elongation factor P (EF-P) OB domain CJ259_RS08490 PF09285 Elongation factor P, C-terminal CJ259_RS08495 PF03692 Putative zinc- or iron-chelating domain CJ259_RS08505 PF07690 Major Facilitator Superfamily CJ259_RS08515 PF00381 PTS HPr component phosphorylation site CJ259_RS08515 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJ259_RS08520 PF00294 pfkB family carbohydrate kinase CJ259_RS08525 PF02378 Phosphotransferase system, EIIC CJ259_RS08525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJ259_RS08530 PF01261 Xylose isomerase-like TIM barrel CJ259_RS08535 PF03601 Conserved hypothetical protein 698 CJ259_RS08545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS08545 PF03466 LysR substrate binding domain CJ259_RS08550 PF00324 Amino acid permease CJ259_RS08560 PF00593 TonB dependent receptor CJ259_RS08560 PF07715 TonB-dependent Receptor Plug Domain CJ259_RS08565 PF00756 Putative esterase CJ259_RS08570 PF01227 GTP cyclohydrolase I CJ259_RS08575 PF04235 Protein of unknown function (DUF418) CJ259_RS08580 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS08585 PF13407 Periplasmic binding protein domain CJ259_RS08590 PF00005 ABC transporter CJ259_RS08595 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS08600 PF02698 DUF218 domain CJ259_RS08605 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CJ259_RS08605 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CJ259_RS08610 PF04172 LrgB-like family CJ259_RS08615 PF03788 LrgA family CJ259_RS08620 PF01207 Dihydrouridine synthase (Dus) CJ259_RS08625 PF04966 Carbohydrate-selective porin, OprB family CJ259_RS08630 PF03123 CAT RNA binding domain CJ259_RS08630 PF00874 PRD domain CJ259_RS08635 PF00367 phosphotransferase system, EIIB CJ259_RS08635 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CJ259_RS08635 PF02378 Phosphotransferase system, EIIC CJ259_RS08640 PF00232 Glycosyl hydrolase family 1 CJ259_RS08650 PF02321 Outer membrane efflux protein CJ259_RS08655 PF09335 SNARE associated Golgi protein CJ259_RS08660 PF04893 Yip1 domain CJ259_RS08665 PF00768 D-alanyl-D-alanine carboxypeptidase CJ259_RS08675 PF01565 FAD binding domain CJ259_RS08675 PF09330 D-lactate dehydrogenase, membrane binding CJ259_RS08680 PF14310 Fibronectin type III-like domain CJ259_RS08680 PF00933 Glycosyl hydrolase family 3 N terminal domain CJ259_RS08680 PF01915 Glycosyl hydrolase family 3 C-terminal domain CJ259_RS08685 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CJ259_RS08690 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS08695 PF00005 ABC transporter CJ259_RS08700 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS08710 PF07694 5TMR of 5TMR-LYT CJ259_RS08710 PF06580 Histidine kinase CJ259_RS08715 PF04397 LytTr DNA-binding domain CJ259_RS08715 PF00072 Response regulator receiver domain CJ259_RS08720 PF07308 Protein of unknown function (DUF1456) CJ259_RS08725 PF01588 Putative tRNA binding domain CJ259_RS08725 PF09334 tRNA synthetases class I (M) CJ259_RS08730 PF10609 NUBPL iron-transfer P-loop NTPase CJ259_RS08740 PF11776 Nickel/cobalt transporter regulator CJ259_RS08745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS08745 PF03466 LysR substrate binding domain CJ259_RS08750 PF00860 Permease family CJ259_RS08755 PF13382 Adenine deaminase C-terminal domain CJ259_RS08755 PF01979 Amidohydrolase family CJ259_RS08760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS08760 PF03466 LysR substrate binding domain CJ259_RS08770 PF02110 Hydroxyethylthiazole kinase family CJ259_RS08775 PF08543 Phosphomethylpyrimidine kinase CJ259_RS08780 PF01791 DeoC/LacD family aldolase CJ259_RS08785 PF07690 Major Facilitator Superfamily CJ259_RS08795 PF00106 short chain dehydrogenase CJ259_RS08800 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS08805 PF04198 Putative sugar-binding domain CJ259_RS08810 PF01232 Mannitol dehydrogenase Rossmann domain CJ259_RS08810 PF08125 Mannitol dehydrogenase C-terminal domain CJ259_RS08815 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJ259_RS08815 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJ259_RS08825 PF13419 Haloacid dehalogenase-like hydrolase CJ259_RS08830 PF13378 Enolase C-terminal domain-like CJ259_RS08830 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJ259_RS08835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ259_RS08840 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS08845 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS08845 PF12911 N-terminal TM domain of oligopeptide transport permease C CJ259_RS08850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ259_RS08850 PF00005 ABC transporter CJ259_RS08855 PF00005 ABC transporter CJ259_RS08855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ259_RS08860 PF00781 Diacylglycerol kinase catalytic domain CJ259_RS08865 PF16325 Peptidase family U32 C-terminal domain CJ259_RS08865 PF01136 Peptidase family U32 CJ259_RS08870 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS08870 PF00072 Response regulator receiver domain CJ259_RS08875 PF00672 HAMP domain CJ259_RS08875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS08875 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS08880 PF07690 Major Facilitator Superfamily CJ259_RS08885 PF00873 AcrB/AcrD/AcrF family CJ259_RS08890 PF00873 AcrB/AcrD/AcrF family CJ259_RS08895 PF13533 Biotin-lipoyl like CJ259_RS08900 PF00375 Sodium:dicarboxylate symporter family CJ259_RS08910 PF00072 Response regulator receiver domain CJ259_RS08910 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS08915 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS08915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS08915 PF13426 PAS domain CJ259_RS08915 PF00672 HAMP domain CJ259_RS08920 PF00012 Hsp70 protein CJ259_RS08925 PF06029 AlkA N-terminal domain CJ259_RS08925 PF00730 HhH-GPD superfamily base excision DNA repair protein CJ259_RS08930 PF00485 Phosphoribulokinase / Uridine kinase family CJ259_RS08935 PF00692 dUTPase CJ259_RS08940 PF05170 AsmA family CJ259_RS08945 PF03741 Integral membrane protein TerC family CJ259_RS08945 PF00571 CBS domain CJ259_RS08945 PF03471 Transporter associated domain CJ259_RS08955 PF00483 Nucleotidyl transferase CJ259_RS08960 PF01569 PAP2 superfamily CJ259_RS08965 PF14052 Capsule assembly protein Wzi CJ259_RS08970 PF10531 SLBB domain CJ259_RS08970 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CJ259_RS08970 PF02563 Polysaccharide biosynthesis/export protein CJ259_RS08975 PF01451 Low molecular weight phosphotyrosine protein phosphatase CJ259_RS08980 PF13614 AAA domain CJ259_RS08980 PF02706 Chain length determinant protein CJ259_RS08980 PF13807 G-rich domain on putative tyrosine kinase CJ259_RS08985 PF02397 Bacterial sugar transferase CJ259_RS08995 PF00535 Glycosyl transferase family 2 CJ259_RS09000 PF00535 Glycosyl transferase family 2 CJ259_RS09010 PF00534 Glycosyl transferases group 1 CJ259_RS09030 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CJ259_RS09030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJ259_RS09035 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CJ259_RS09035 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CJ259_RS09035 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CJ259_RS09045 PF01370 NAD dependent epimerase/dehydratase family CJ259_RS09050 PF01061 ABC-2 type transporter CJ259_RS09055 PF00005 ABC transporter CJ259_RS09065 PF03275 UDP-galactopyranose mutase CJ259_RS09075 PF00534 Glycosyl transferases group 1 CJ259_RS09075 PF13439 Glycosyltransferase Family 4 CJ259_RS09080 PF01501 Glycosyl transferase family 8 CJ259_RS09080 PF00535 Glycosyl transferase family 2 CJ259_RS09090 PF00535 Glycosyl transferase family 2 CJ259_RS09100 PF01502 Phosphoribosyl-AMP cyclohydrolase CJ259_RS09100 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CJ259_RS09105 PF00977 Histidine biosynthesis protein CJ259_RS09110 PF00977 Histidine biosynthesis protein CJ259_RS09115 PF00117 Glutamine amidotransferase class-I CJ259_RS09120 PF00475 Imidazoleglycerol-phosphate dehydratase CJ259_RS09120 PF08645 Polynucleotide kinase 3 phosphatase CJ259_RS09125 PF00155 Aminotransferase class I and II CJ259_RS09130 PF00815 Histidinol dehydrogenase CJ259_RS09135 PF01634 ATP phosphoribosyltransferase CJ259_RS09135 PF08029 HisG, C-terminal domain CJ259_RS09145 PF01370 NAD dependent epimerase/dehydratase family CJ259_RS09150 PF03466 LysR substrate binding domain CJ259_RS09150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS09160 PF13520 Amino acid permease CJ259_RS09165 PF01022 Bacterial regulatory protein, arsR family CJ259_RS09170 PF00009 Elongation factor Tu GTP binding domain CJ259_RS09170 PF03144 Elongation factor Tu domain 2 CJ259_RS09170 PF03764 Elongation factor G, domain IV CJ259_RS09170 PF00679 Elongation factor G C-terminus CJ259_RS09170 PF14492 Elongation Factor G, domain II CJ259_RS09180 PF00929 Exonuclease CJ259_RS09180 PF08411 Exonuclease C-terminal CJ259_RS09185 PF00768 D-alanyl-D-alanine carboxypeptidase CJ259_RS09185 PF07943 Penicillin-binding protein 5, C-terminal domain CJ259_RS09190 PF06445 GyrI-like small molecule binding domain CJ259_RS09195 PF04632 Fusaric acid resistance protein family CJ259_RS09200 PF04363 Protein of unknown function (DUF496) CJ259_RS09205 PF02654 Cobalamin-5-phosphate synthase CJ259_RS09210 PF02277 Phosphoribosyltransferase CJ259_RS09215 PF05221 S-adenosyl-L-homocysteine hydrolase CJ259_RS09215 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CJ259_RS09225 PF14552 Tautomerase enzyme CJ259_RS09230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS09230 PF03466 LysR substrate binding domain CJ259_RS09240 PF00083 Sugar (and other) transporter CJ259_RS09240 PF07690 Major Facilitator Superfamily CJ259_RS09255 PF00563 EAL domain CJ259_RS09255 PF00990 Diguanylate cyclase, GGDEF domain CJ259_RS09255 PF13188 PAS domain CJ259_RS09255 PF03707 Bacterial signalling protein N terminal repeat CJ259_RS09265 PF09313 Domain of unknown function (DUF1971) CJ259_RS09270 PF08956 Domain of unknown function (DUF1869) CJ259_RS09275 PF03466 LysR substrate binding domain CJ259_RS09275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS09285 PF00561 alpha/beta hydrolase fold CJ259_RS09290 PF00990 Diguanylate cyclase, GGDEF domain CJ259_RS09310 PF01554 MatE CJ259_RS09320 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CJ259_RS09320 PF01048 Phosphorylase superfamily CJ259_RS09330 PF12146 Serine aminopeptidase, S33 CJ259_RS09340 PF00107 Zinc-binding dehydrogenase CJ259_RS09340 PF08240 Alcohol dehydrogenase GroES-like domain CJ259_RS09345 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS09345 PF16925 Tetracyclin repressor-like, C-terminal domain CJ259_RS09350 PF00999 Sodium/hydrogen exchanger family CJ259_RS09360 PF03466 LysR substrate binding domain CJ259_RS09360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS09365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS09365 PF03466 LysR substrate binding domain CJ259_RS09370 PF17969 L,D-transpeptidase C-terminal domain CJ259_RS09370 PF03734 L,D-transpeptidase catalytic domain CJ259_RS09375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS09375 PF03466 LysR substrate binding domain CJ259_RS09380 PF01042 Endoribonuclease L-PSP CJ259_RS09390 PF06167 Glucose-regulated metallo-peptidase M90 CJ259_RS09400 PF00267 Gram-negative porin CJ259_RS09415 PF01966 HD domain CJ259_RS09420 PF00145 C-5 cytosine-specific DNA methylase CJ259_RS09420 PF18284 DNA methylase N-terminal domain CJ259_RS09425 PF03852 DNA mismatch endonuclease Vsr CJ259_RS09435 PF05661 Protein of unknown function (DUF808) CJ259_RS09440 PF17151 Periplasmic sensor domain CJ259_RS09440 PF00990 Diguanylate cyclase, GGDEF domain CJ259_RS09445 PF10733 Protein of unknown function (DUF2525) CJ259_RS09450 PF10781 Dextransucrase DSRB CJ259_RS09455 PF00196 Bacterial regulatory proteins, luxR family CJ259_RS09460 PF13987 YedD-like protein CJ259_RS09465 PF00128 Alpha amylase, catalytic domain CJ259_RS09465 PF02806 Alpha amylase, C-terminal all-beta domain CJ259_RS09470 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ259_RS09475 PF00291 Pyridoxal-phosphate dependent enzyme CJ259_RS09480 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS09485 PF00005 ABC transporter CJ259_RS09490 PF03472 Autoinducer binding domain CJ259_RS09490 PF00196 Bacterial regulatory proteins, luxR family CJ259_RS09495 PF10769 Protein of unknown function (DUF2594) CJ259_RS09500 PF00196 Bacterial regulatory proteins, luxR family CJ259_RS09500 PF00072 Response regulator receiver domain CJ259_RS09505 PF08459 UvrC Helix-hairpin-helix N-terminal CJ259_RS09505 PF02151 UvrB/uvrC motif CJ259_RS09505 PF01541 GIY-YIG catalytic domain CJ259_RS09510 PF01066 CDP-alcohol phosphatidyltransferase CJ259_RS09535 PF00701 Dihydrodipicolinate synthetase family CJ259_RS09540 PF03695 Uncharacterised protein family (UPF0149) CJ259_RS09540 PF02810 SEC-C motif CJ259_RS09545 PF03222 Tryptophan/tyrosine permease family CJ259_RS09550 PF10678 Protein of unknown function (DUF2492) CJ259_RS09555 PF00210 Ferritin-like domain CJ259_RS09570 PF07690 Major Facilitator Superfamily CJ259_RS09575 PF10964 Protein of unknown function (DUF2766) CJ259_RS09590 PF00210 Ferritin-like domain CJ259_RS09600 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CJ259_RS09605 PF00005 ABC transporter CJ259_RS09610 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS09615 PF02358 Trehalose-phosphatase CJ259_RS09620 PF00982 Glycosyltransferase family 20 CJ259_RS09625 PF00582 Universal stress protein family CJ259_RS09635 PF07470 Glycosyl Hydrolase Family 88 CJ259_RS09640 PF00750 tRNA synthetases class I (R) CJ259_RS09640 PF05746 DALR anticodon binding domain CJ259_RS09640 PF03485 Arginyl tRNA synthetase N terminal domain CJ259_RS09645 PF06185 YecM protein CJ259_RS09650 PF03932 CutC family CJ259_RS09655 PF08003 Protein of unknown function (DUF1698) CJ259_RS09660 PF13649 Methyltransferase domain CJ259_RS09665 PF01124 MAPEG family CJ259_RS09670 PF01904 Protein of unknown function DUF72 CJ259_RS09675 PF00857 Isochorismatase family CJ259_RS09680 PF02938 GAD domain CJ259_RS09680 PF01336 OB-fold nucleic acid binding domain CJ259_RS09680 PF00152 tRNA synthetases class II (D, K and N) CJ259_RS09685 PF00293 NUDIX domain CJ259_RS09690 PF01709 Transcriptional regulator CJ259_RS09695 PF02075 Crossover junction endodeoxyribonuclease RuvC CJ259_RS09700 PF07499 RuvA, C-terminal domain CJ259_RS09700 PF01330 RuvA N terminal domain CJ259_RS09705 PF05491 RuvB C-terminal winged helix domain CJ259_RS09705 PF17864 RuvB AAA lid domain CJ259_RS09705 PF05496 Holliday junction DNA helicase RuvB P-loop domain CJ259_RS09710 PF00950 ABC 3 transport family CJ259_RS09715 PF00005 ABC transporter CJ259_RS09720 PF01297 Zinc-uptake complex component A periplasmic CJ259_RS09725 PF01551 Peptidase family M23 CJ259_RS09725 PF08525 Opacity-associated protein A N-terminal motif CJ259_RS09725 PF01476 LysM domain CJ259_RS09730 PF03279 Bacterial lipid A biosynthesis acyltransferase CJ259_RS09735 PF00224 Pyruvate kinase, barrel domain CJ259_RS09735 PF02887 Pyruvate kinase, alpha/beta domain CJ259_RS09740 PF01418 Helix-turn-helix domain, rpiR family CJ259_RS09740 PF01380 SIS domain CJ259_RS09755 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CJ259_RS09755 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CJ259_RS09760 PF00920 Dehydratase family CJ259_RS09765 PF01081 KDPG and KHG aldolase CJ259_RS09770 PF02222 ATP-grasp domain CJ259_RS09775 PF07130 YebG protein CJ259_RS09780 PF04391 Protein of unknown function (DUF533) CJ259_RS09785 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CJ259_RS09785 PF00326 Prolyl oligopeptidase family CJ259_RS09790 PF00929 Exonuclease CJ259_RS09795 PF06440 DNA polymerase III, theta subunit CJ259_RS09800 PF04234 CopC domain CJ259_RS09805 PF05425 Copper resistance protein D CJ259_RS09810 PF10709 Protein of unknown function (DUF2511) CJ259_RS09820 PF04393 Protein of unknown function (DUF535) CJ259_RS09825 PF00149 Calcineurin-like phosphoesterase CJ259_RS09830 PF07358 Protein of unknown function (DUF1482) CJ259_RS09835 PF07351 Protein of unknown function (DUF1480) CJ259_RS09840 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CJ259_RS09840 PF01189 16S rRNA methyltransferase RsmB/F CJ259_RS09840 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CJ259_RS09845 PF02470 MlaD protein CJ259_RS09850 PF04403 Paraquat-inducible protein A CJ259_RS09855 PF13185 GAF domain CJ259_RS09860 PF04352 ProQ/FINO family CJ259_RS09860 PF17516 ProQ C-terminal domain CJ259_RS09865 PF17804 Tail specific protease N-terminal domain CJ259_RS09865 PF03572 Peptidase family S41 CJ259_RS09865 PF00595 PDZ domain CJ259_RS09865 PF11818 C-terminal domain of tail specific protease (DUF3340) CJ259_RS09870 PF01435 Peptidase family M48 CJ259_RS09875 PF07690 Major Facilitator Superfamily CJ259_RS09885 PF01614 Bacterial transcriptional regulator CJ259_RS09885 PF09339 IclR helix-turn-helix domain CJ259_RS09890 PF13996 YobH-like protein CJ259_RS09895 PF13998 MgrB protein CJ259_RS09900 PF13974 YebO-like protein CJ259_RS09915 PF10736 Protein of unknown function (DUF2627) CJ259_RS09920 PF00313 'Cold-shock' DNA-binding domain CJ259_RS09925 PF03717 Penicillin-binding Protein dimerisation domain CJ259_RS09925 PF00905 Penicillin binding protein transpeptidase domain CJ259_RS09930 PF13847 Methyltransferase domain CJ259_RS09935 PF02659 Putative manganese efflux pump CJ259_RS09940 PF06173 Protein of unknown function (DUF986) CJ259_RS09945 PF03613 PTS system mannose/fructose/sorbose family IID component CJ259_RS09950 PF03609 PTS system sorbose-specific iic component CJ259_RS09955 PF03830 PTS system sorbose subfamily IIB component CJ259_RS09955 PF03610 PTS system fructose IIA component CJ259_RS09960 PF03471 Transporter associated domain CJ259_RS09960 PF03741 Integral membrane protein TerC family CJ259_RS09965 PF00563 EAL domain CJ259_RS09965 PF12792 CSS motif domain associated with EAL CJ259_RS09970 PF03315 Serine dehydratase beta chain CJ259_RS09970 PF03313 Serine dehydratase alpha chain CJ259_RS09975 PF00293 NUDIX domain CJ259_RS09980 PF04715 Anthranilate synthase component I, N terminal region CJ259_RS09980 PF00425 chorismate binding enzyme CJ259_RS09985 PF03701 Uncharacterised protein family (UPF0181) CJ259_RS09990 PF01042 Endoribonuclease L-PSP CJ259_RS09995 PF13307 Helicase C-terminal domain CJ259_RS09995 PF04851 Type III restriction enzyme, res subunit CJ259_RS10000 PF00814 Glycoprotease family CJ259_RS10005 PF03843 Outer membrane lipoprotein Slp family CJ259_RS10010 PF00501 AMP-binding enzyme CJ259_RS10010 PF13193 AMP-binding enzyme C-terminal domain CJ259_RS10015 PF00570 HRDC domain CJ259_RS10015 PF01612 3'-5' exonuclease CJ259_RS10020 PF03776 Septum formation topological specificity factor MinE CJ259_RS10025 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CJ259_RS10030 PF03775 Septum formation inhibitor MinC, C-terminal domain CJ259_RS10030 PF05209 Septum formation inhibitor MinC, N-terminal domain CJ259_RS10035 PF05166 YcgL domain CJ259_RS10040 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJ259_RS10045 PF03692 Putative zinc- or iron-chelating domain CJ259_RS10055 PF02600 Disulfide bond formation protein DsbB CJ259_RS10060 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CJ259_RS10065 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS10065 PF07840 FadR C-terminal domain CJ259_RS10070 PF04293 SpoVR like protein CJ259_RS10075 PF01266 FAD dependent oxidoreductase CJ259_RS10080 PF01168 Alanine racemase, N-terminal domain CJ259_RS10080 PF00842 Alanine racemase, C-terminal domain CJ259_RS10085 PF02080 TrkA-C domain CJ259_RS10085 PF00999 Sodium/hydrogen exchanger family CJ259_RS10085 PF03471 Transporter associated domain CJ259_RS10090 PF17676 LD-carboxypeptidase C-terminal domain CJ259_RS10090 PF02016 LD-carboxypeptidase N-terminal domain CJ259_RS10095 PF01464 Transglycosylase SLT domain CJ259_RS10100 PF00593 TonB dependent receptor CJ259_RS10100 PF07715 TonB-dependent Receptor Plug Domain CJ259_RS10105 PF01204 Trehalase CJ259_RS10115 PF14403 Circularly permuted ATP-grasp type 2 CJ259_RS10165 PF03466 LysR substrate binding domain CJ259_RS10165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS10170 PF00291 Pyridoxal-phosphate dependent enzyme CJ259_RS10175 PF03222 Tryptophan/tyrosine permease family CJ259_RS10180 PF00871 Acetokinase family CJ259_RS10185 PF02901 Pyruvate formate lyase-like CJ259_RS10185 PF01228 Glycine radical CJ259_RS10190 PF13458 Periplasmic binding protein CJ259_RS10195 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS10200 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS10200 PF11862 Domain of unknown function (DUF3382) CJ259_RS10205 PF00005 ABC transporter CJ259_RS10205 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJ259_RS10210 PF00005 ABC transporter CJ259_RS10215 PF03466 LysR substrate binding domain CJ259_RS10215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS10220 PF01293 Phosphoenolpyruvate carboxykinase CJ259_RS10230 PF03466 LysR substrate binding domain CJ259_RS10230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS10235 PF07690 Major Facilitator Superfamily CJ259_RS10245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS10245 PF03466 LysR substrate binding domain CJ259_RS10255 PF00849 RNA pseudouridylate synthase CJ259_RS10260 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CJ259_RS10285 PF00691 OmpA family CJ259_RS10285 PF13488 Glycine zipper CJ259_RS10290 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CJ259_RS10290 PF13296 Putative type VI secretion system Rhs element Vgr CJ259_RS10290 PF04717 Type VI secretion system, phage-baseplate injector CJ259_RS10295 PF01476 LysM domain CJ259_RS10345 PF13407 Periplasmic binding protein domain CJ259_RS10355 PF01926 50S ribosome-binding GTPase CJ259_RS10355 PF06071 Protein of unknown function (DUF933) CJ259_RS10360 PF01195 Peptidyl-tRNA hydrolase CJ259_RS10365 PF10762 Protein of unknown function (DUF2583) CJ259_RS10375 PF00916 Sulfate permease family CJ259_RS10375 PF01740 STAS domain CJ259_RS10380 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CJ259_RS10380 PF14572 Phosphoribosyl synthetase-associated domain CJ259_RS10385 PF08544 GHMP kinases C terminal CJ259_RS10385 PF00288 GHMP kinases N terminal domain CJ259_RS10390 PF03550 Outer membrane lipoprotein LolB CJ259_RS10395 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CJ259_RS10395 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CJ259_RS10395 PF01488 Shikimate / quinate 5-dehydrogenase CJ259_RS10400 PF00472 RF-1 domain CJ259_RS10400 PF03462 PCRF domain CJ259_RS10405 PF13847 Methyltransferase domain CJ259_RS10405 PF17827 PrmC N-terminal domain CJ259_RS10410 PF04247 Invasion gene expression up-regulator, SirB CJ259_RS10415 PF13369 Transglutaminase-like superfamily CJ259_RS10420 PF00793 DAHP synthetase I family CJ259_RS10425 PF01699 Sodium/calcium exchanger protein CJ259_RS10430 PF06150 ChaB CJ259_RS10435 PF04752 ChaC-like protein CJ259_RS10445 PF02635 DsrE/DsrF-like family CJ259_RS10450 PF03861 ANTAR domain CJ259_RS10450 PF08376 Nitrate and nitrite sensing CJ259_RS10460 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS10465 PF00005 ABC transporter CJ259_RS10470 PF18267 Rubredoxin NAD+ reductase C-terminal domain CJ259_RS10470 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ259_RS10470 PF13806 Rieske-like [2Fe-2S] domain CJ259_RS10470 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJ259_RS10470 PF04324 BFD-like [2Fe-2S] binding domain CJ259_RS10470 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJ259_RS10475 PF00384 Molybdopterin oxidoreductase CJ259_RS10475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJ259_RS10475 PF01568 Molydopterin dinucleotide binding domain CJ259_RS10475 PF04324 BFD-like [2Fe-2S] binding domain CJ259_RS10480 PF11924 Inverse autotransporter, beta-domain CJ259_RS10485 PF00196 Bacterial regulatory proteins, luxR family CJ259_RS10485 PF00072 Response regulator receiver domain CJ259_RS10490 PF07730 Histidine kinase CJ259_RS10490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS10490 PF00672 HAMP domain CJ259_RS10490 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CJ259_RS10495 PF07690 Major Facilitator Superfamily CJ259_RS10500 PF00384 Molybdopterin oxidoreductase CJ259_RS10500 PF14710 Respiratory nitrate reductase alpha N-terminal CJ259_RS10500 PF01568 Molydopterin dinucleotide binding domain CJ259_RS10505 PF14711 Respiratory nitrate reductase beta C-terminal CJ259_RS10505 PF13247 4Fe-4S dicluster domain CJ259_RS10510 PF02613 Nitrate reductase delta subunit CJ259_RS10515 PF02665 Nitrate reductase gamma subunit CJ259_RS10525 PF01037 Lrp/AsnC ligand binding domain CJ259_RS10560 PF00551 Formyl transferase CJ259_RS10560 PF01842 ACT domain CJ259_RS10565 PF02810 SEC-C motif CJ259_RS10570 PF01734 Patatin-like phospholipase CJ259_RS10575 PF00072 Response regulator receiver domain CJ259_RS10580 PF00483 Nucleotidyl transferase CJ259_RS10585 PF00816 H-NS histone family CJ259_RS10590 PF00265 Thymidine kinase CJ259_RS10595 PF00465 Iron-containing alcohol dehydrogenase CJ259_RS10595 PF00171 Aldehyde dehydrogenase family CJ259_RS10605 PF01914 MarC family integral membrane protein CJ259_RS10610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ259_RS10615 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS10620 PF12911 N-terminal TM domain of oligopeptide transport permease C CJ259_RS10620 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS10625 PF00005 ABC transporter CJ259_RS10625 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ259_RS10630 PF00005 ABC transporter CJ259_RS10630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ259_RS10635 PF00027 Cyclic nucleotide-binding domain CJ259_RS10635 PF00520 Ion transport protein CJ259_RS10640 PF04269 Protein of unknown function, DUF440 CJ259_RS10645 PF13396 Phospholipase_D-nuclease N-terminal CJ259_RS10645 PF13091 PLD-like domain CJ259_RS10655 PF04264 YceI-like domain CJ259_RS10660 PF03795 YCII-related domain CJ259_RS10665 PF03544 Gram-negative bacterial TonB protein C-terminal CJ259_RS10670 PF03881 Fructosamine kinase CJ259_RS10675 PF11080 Endoribonuclease GhoS CJ259_RS10680 PF00294 pfkB family carbohydrate kinase CJ259_RS10685 PF04338 Protein of unknown function, DUF481 CJ259_RS10695 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJ259_RS10695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJ259_RS10695 PF03129 Anticodon binding domain CJ259_RS10695 PF02824 TGS domain CJ259_RS10700 PF00707 Translation initiation factor IF-3, C-terminal domain CJ259_RS10700 PF05198 Translation initiation factor IF-3, N-terminal domain CJ259_RS10705 PF01632 Ribosomal protein L35 CJ259_RS10710 PF00453 Ribosomal protein L20 CJ259_RS10725 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CJ259_RS10725 PF01409 tRNA synthetases class II core domain (F) CJ259_RS10730 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CJ259_RS10730 PF03147 Ferredoxin-fold anticodon binding domain CJ259_RS10730 PF03484 tRNA synthetase B5 domain CJ259_RS10730 PF01588 Putative tRNA binding domain CJ259_RS10730 PF03483 B3/4 domain CJ259_RS10735 PF00216 Bacterial DNA-binding protein CJ259_RS10745 PF01266 FAD dependent oxidoreductase CJ259_RS10750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS10750 PF03466 LysR substrate binding domain CJ259_RS10760 PF01032 FecCD transport family CJ259_RS10765 PF03180 NLPA lipoprotein CJ259_RS10770 PF00255 Glutathione peroxidase CJ259_RS10775 PF00005 ABC transporter CJ259_RS10780 PF00877 NlpC/P60 family CJ259_RS10785 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CJ259_RS10790 PF10636 Hemin uptake protein hemP CJ259_RS10795 PF00793 DAHP synthetase I family CJ259_RS10800 PF03618 Kinase/pyrophosphorylase CJ259_RS10805 PF00391 PEP-utilising enzyme, mobile domain CJ259_RS10805 PF02896 PEP-utilising enzyme, TIM barrel domain CJ259_RS10805 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CJ259_RS10815 PF01594 AI-2E family transporter CJ259_RS10820 PF13183 4Fe-4S dicluster domain CJ259_RS10820 PF01565 FAD binding domain CJ259_RS10820 PF02913 FAD linked oxidases, C-terminal domain CJ259_RS10825 PF03061 Thioesterase superfamily CJ259_RS10830 PF04226 Transglycosylase associated protein CJ259_RS10850 PF08267 Cobalamin-independent synthase, N-terminal domain CJ259_RS10850 PF01717 Cobalamin-independent synthase, Catalytic domain CJ259_RS10855 PF07690 Major Facilitator Superfamily CJ259_RS10860 PF00005 ABC transporter CJ259_RS10865 PF01032 FecCD transport family CJ259_RS10875 PF03466 LysR substrate binding domain CJ259_RS10875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS10885 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS10895 PF00873 AcrB/AcrD/AcrF family CJ259_RS10900 PF01070 FMN-dependent dehydrogenase CJ259_RS10905 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS10920 PF01521 Iron-sulphur cluster biosynthesis CJ259_RS10925 PF01458 Uncharacterized protein family (UPF0051) CJ259_RS10930 PF00005 ABC transporter CJ259_RS10935 PF01458 Uncharacterized protein family (UPF0051) CJ259_RS10940 PF00266 Aminotransferase class-V CJ259_RS10945 PF02657 Fe-S metabolism associated domain CJ259_RS10950 PF03734 L,D-transpeptidase catalytic domain CJ259_RS10950 PF01476 LysM domain CJ259_RS10950 PF17969 L,D-transpeptidase C-terminal domain CJ259_RS10955 PF04728 Lipoprotein leucine-zipper CJ259_RS10960 PF02887 Pyruvate kinase, alpha/beta domain CJ259_RS10960 PF00224 Pyruvate kinase, barrel domain CJ259_RS10970 PF10965 Protein of unknown function (DUF2767) CJ259_RS10975 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS10975 PF17926 Tetracyclin repressor-like, C-terminal domain CJ259_RS10980 PF01261 Xylose isomerase-like TIM barrel CJ259_RS10980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJ259_RS10985 PF07690 Major Facilitator Superfamily CJ259_RS10990 PF08501 Shikimate dehydrogenase substrate binding domain CJ259_RS10990 PF01488 Shikimate / quinate 5-dehydrogenase CJ259_RS10990 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CJ259_RS11000 PF00005 ABC transporter CJ259_RS11005 PF01032 FecCD transport family CJ259_RS11010 PF01497 Periplasmic binding protein CJ259_RS11015 PF09339 IclR helix-turn-helix domain CJ259_RS11015 PF01614 Bacterial transcriptional regulator CJ259_RS11020 PF01494 FAD binding domain CJ259_RS11025 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CJ259_RS11030 PF12697 Alpha/beta hydrolase family CJ259_RS11035 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJ259_RS11040 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CJ259_RS11040 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJ259_RS11045 PF00682 HMGL-like CJ259_RS11045 PF07836 DmpG-like communication domain CJ259_RS11050 PF07690 Major Facilitator Superfamily CJ259_RS11055 PF02578 Multi-copper polyphenol oxidoreductase laccase CJ259_RS11065 PF05995 Cysteine dioxygenase type I CJ259_RS11070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS11070 PF03466 LysR substrate binding domain CJ259_RS11075 PF00296 Luciferase-like monooxygenase CJ259_RS11095 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS11100 PF00005 ABC transporter CJ259_RS11105 PF07715 TonB-dependent Receptor Plug Domain CJ259_RS11110 PF00005 ABC transporter CJ259_RS11115 PF01032 FecCD transport family CJ259_RS11120 PF01032 FecCD transport family CJ259_RS11135 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ259_RS11140 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS11145 PF00005 ABC transporter CJ259_RS11160 PF07690 Major Facilitator Superfamily CJ259_RS11175 PF01546 Peptidase family M20/M25/M40 CJ259_RS11175 PF07687 Peptidase dimerisation domain CJ259_RS11180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJ259_RS11180 PF01568 Molydopterin dinucleotide binding domain CJ259_RS11180 PF00384 Molybdopterin oxidoreductase CJ259_RS11185 PF02615 Malate/L-lactate dehydrogenase CJ259_RS11200 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS11205 PF00005 ABC transporter CJ259_RS11205 PF08402 TOBE domain CJ259_RS11215 PF13618 Gluconate 2-dehydrogenase subunit 3 CJ259_RS11220 PF00732 GMC oxidoreductase CJ259_RS11220 PF05199 GMC oxidoreductase CJ259_RS11225 PF00034 Cytochrome c CJ259_RS11225 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJ259_RS11230 PF00005 ABC transporter CJ259_RS11235 PF03379 CcmB protein CJ259_RS11240 PF01578 Cytochrome C assembly protein CJ259_RS11250 PF03100 CcmE CJ259_RS11255 PF01578 Cytochrome C assembly protein CJ259_RS11255 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CJ259_RS11260 PF08534 Redoxin CJ259_RS11265 PF03918 Cytochrome C biogenesis protein CJ259_RS11300 PF03544 Gram-negative bacterial TonB protein C-terminal CJ259_RS11315 PF00672 HAMP domain CJ259_RS11315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS11315 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS11320 PF00072 Response regulator receiver domain CJ259_RS11320 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS11340 PF00873 AcrB/AcrD/AcrF family CJ259_RS11355 PF00106 short chain dehydrogenase CJ259_RS11360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJ259_RS11360 PF00205 Thiamine pyrophosphate enzyme, central domain CJ259_RS11360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJ259_RS11365 PF03306 Alpha-acetolactate decarboxylase CJ259_RS11370 PF03466 LysR substrate binding domain CJ259_RS11370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS11375 PF00106 short chain dehydrogenase CJ259_RS11385 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJ259_RS11385 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJ259_RS11390 PF00108 Thiolase, N-terminal domain CJ259_RS11390 PF02803 Thiolase, C-terminal domain CJ259_RS11395 PF01144 Coenzyme A transferase CJ259_RS11400 PF01144 Coenzyme A transferase CJ259_RS11405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS11405 PF03466 LysR substrate binding domain CJ259_RS11430 PF01565 FAD binding domain CJ259_RS11430 PF02913 FAD linked oxidases, C-terminal domain CJ259_RS11435 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS11440 PF00005 ABC transporter CJ259_RS11450 PF02633 Creatinine amidohydrolase CJ259_RS11455 PF01042 Endoribonuclease L-PSP CJ259_RS11460 PF07969 Amidohydrolase family CJ259_RS11465 PF00175 Oxidoreductase NAD-binding domain CJ259_RS11465 PF00111 2Fe-2S iron-sulfur cluster binding domain CJ259_RS11475 PF03466 LysR substrate binding domain CJ259_RS11475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS11485 PF01979 Amidohydrolase family CJ259_RS11500 PF03466 LysR substrate binding domain CJ259_RS11500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS11505 PF08240 Alcohol dehydrogenase GroES-like domain CJ259_RS11505 PF00698 Acyl transferase domain CJ259_RS11505 PF02801 Beta-ketoacyl synthase, C-terminal domain CJ259_RS11505 PF16197 Ketoacyl-synthetase C-terminal extension CJ259_RS11505 PF00550 Phosphopantetheine attachment site CJ259_RS11505 PF14765 Polyketide synthase dehydratase CJ259_RS11505 PF08659 KR domain CJ259_RS11505 PF00109 Beta-ketoacyl synthase, N-terminal domain CJ259_RS11510 PF03466 LysR substrate binding domain CJ259_RS11510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS11515 PF07690 Major Facilitator Superfamily CJ259_RS11535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ259_RS11535 PF00005 ABC transporter CJ259_RS11540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ259_RS11540 PF00005 ABC transporter CJ259_RS11545 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS11550 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS11555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ259_RS11565 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJ259_RS11570 PF00455 DeoR C terminal sensor domain CJ259_RS11570 PF08220 DeoR-like helix-turn-helix domain CJ259_RS11580 PF00484 Carbonic anhydrase CJ259_RS11600 PF00753 Metallo-beta-lactamase superfamily CJ259_RS11600 PF10996 Beta-Casp domain CJ259_RS11600 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CJ259_RS11610 PF03466 LysR substrate binding domain CJ259_RS11610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS11640 PF03641 Possible lysine decarboxylase CJ259_RS11650 PF01554 MatE CJ259_RS11655 PF00677 Lumazine binding domain CJ259_RS11665 PF07690 Major Facilitator Superfamily CJ259_RS11670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS11670 PF03466 LysR substrate binding domain CJ259_RS11675 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS11685 PF07690 Major Facilitator Superfamily CJ259_RS11690 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CJ259_RS11690 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CJ259_RS11700 PF00877 NlpC/P60 family CJ259_RS11705 PF00462 Glutaredoxin CJ259_RS11710 PF00929 Exonuclease CJ259_RS11715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJ259_RS11720 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJ259_RS11725 PF16925 Tetracyclin repressor-like, C-terminal domain CJ259_RS11725 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS11730 PF06945 Protein of unknown function (DUF1289) CJ259_RS11735 PF00248 Aldo/keto reductase family CJ259_RS11740 PF00080 Copper/zinc superoxide dismutase (SODC) CJ259_RS11745 PF04632 Fusaric acid resistance protein family CJ259_RS11750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJ259_RS11750 PF00529 HlyD membrane-fusion protein of T1SS CJ259_RS11755 PF07869 Protein of unknown function (DUF1656) CJ259_RS11760 PF01047 MarR family CJ259_RS11765 PF17158 Membrane-associated sensor, integral membrane domain CJ259_RS11765 PF00990 Diguanylate cyclase, GGDEF domain CJ259_RS11770 PF05433 Glycine zipper 2TM domain CJ259_RS11775 PF03702 Anhydro-N-acetylmuramic acid kinase CJ259_RS11780 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CJ259_RS11785 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CJ259_RS11785 PF01243 Pyridoxamine 5'-phosphate oxidase CJ259_RS11790 PF00579 tRNA synthetases class I (W and Y) CJ259_RS11795 PF08543 Phosphomethylpyrimidine kinase CJ259_RS11800 PF00043 Glutathione S-transferase, C-terminal domain CJ259_RS11800 PF02798 Glutathione S-transferase, N-terminal domain CJ259_RS11805 PF00854 POT family CJ259_RS11815 PF10576 Iron-sulfur binding domain of endonuclease III CJ259_RS11815 PF00633 Helix-hairpin-helix motif CJ259_RS11815 PF00730 HhH-GPD superfamily base excision DNA repair protein CJ259_RS11820 PF02508 Rnf-Nqr subunit, membrane protein CJ259_RS11825 PF04205 FMN-binding domain CJ259_RS11830 PF03116 NQR2, RnfD, RnfE family CJ259_RS11835 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CJ259_RS11835 PF12838 4Fe-4S dicluster domain CJ259_RS11835 PF13375 RnfC Barrel sandwich hybrid domain CJ259_RS11835 PF10531 SLBB domain CJ259_RS11840 PF04060 Putative Fe-S cluster CJ259_RS11845 PF02508 Rnf-Nqr subunit, membrane protein CJ259_RS11850 PF10754 Protein of unknown function (DUF2569) CJ259_RS11855 PF05321 Haemolysin expression modulating protein CJ259_RS11860 PF00232 Glycosyl hydrolase family 1 CJ259_RS11870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJ259_RS11870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJ259_RS11875 PF00962 Adenosine/AMP deaminase CJ259_RS11880 PF07690 Major Facilitator Superfamily CJ259_RS11885 PF01638 HxlR-like helix-turn-helix CJ259_RS11900 PF01292 Prokaryotic cytochrome b561 CJ259_RS11905 PF02583 Metal-sensitive transcriptional repressor CJ259_RS11910 PF00107 Zinc-binding dehydrogenase CJ259_RS11910 PF08240 Alcohol dehydrogenase GroES-like domain CJ259_RS11915 PF01011 PQQ enzyme repeat CJ259_RS11920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS11920 PF03466 LysR substrate binding domain CJ259_RS11925 PF00775 Dioxygenase CJ259_RS11930 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CJ259_RS11930 PF00775 Dioxygenase CJ259_RS11935 PF07063 Domain of unknown function (DUF1338) CJ259_RS11940 PF00135 Carboxylesterase family CJ259_RS11945 PF08240 Alcohol dehydrogenase GroES-like domain CJ259_RS11945 PF00107 Zinc-binding dehydrogenase CJ259_RS11950 PF04349 Periplasmic glucan biosynthesis protein, MdoG CJ259_RS11955 PF13302 Acetyltransferase (GNAT) domain CJ259_RS11960 PF18836 Beta solenoid repeat from YDCK CJ259_RS11965 PF03595 Voltage-dependent anion channel CJ259_RS11970 PF03848 Tellurite resistance protein TehB CJ259_RS11975 PF11769 Protein of unknown function (DUF3313) CJ259_RS11985 PF12833 Helix-turn-helix domain CJ259_RS11985 PF06445 GyrI-like small molecule binding domain CJ259_RS11990 PF03594 Benzoate membrane transport protein CJ259_RS11995 PF01381 Helix-turn-helix CJ259_RS11995 PF07883 Cupin domain CJ259_RS12005 PF12392 Collagenase CJ259_RS12005 PF01136 Peptidase family U32 CJ259_RS12025 PF02322 Cytochrome bd terminal oxidase subunit II CJ259_RS12030 PF01654 Cytochrome bd terminal oxidase subunit I CJ259_RS12035 PF00155 Aminotransferase class I and II CJ259_RS12035 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS12040 PF13416 Bacterial extracellular solute-binding protein CJ259_RS12045 PF08402 TOBE domain CJ259_RS12045 PF00005 ABC transporter CJ259_RS12050 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS12055 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS12060 PF00171 Aldehyde dehydrogenase family CJ259_RS12080 PF10753 Toxin GhoT_OrtT CJ259_RS12085 PF00364 Biotin-requiring enzyme CJ259_RS12085 PF00561 alpha/beta hydrolase fold CJ259_RS12090 PF00171 Aldehyde dehydrogenase family CJ259_RS12095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ259_RS12100 PF10735 Protein of unknown function (DUF2526) CJ259_RS12105 PF04657 Putative inner membrane exporter, YdcZ CJ259_RS12110 PF00583 Acetyltransferase (GNAT) family CJ259_RS12115 PF08671 Anti-repressor SinI CJ259_RS12115 PF01381 Helix-turn-helix CJ259_RS12120 PF16884 N-terminal domain of oxidoreductase CJ259_RS12120 PF00107 Zinc-binding dehydrogenase CJ259_RS12125 PF01156 Inosine-uridine preferring nucleoside hydrolase CJ259_RS12135 PF04175 Protein of unknown function (DUF406) CJ259_RS12140 PF01979 Amidohydrolase family CJ259_RS12145 PF00593 TonB dependent receptor CJ259_RS12145 PF07715 TonB-dependent Receptor Plug Domain CJ259_RS12160 PF00324 Amino acid permease CJ259_RS12165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS12165 PF03466 LysR substrate binding domain CJ259_RS12170 PF01202 Shikimate kinase CJ259_RS12175 PF00296 Luciferase-like monooxygenase CJ259_RS12180 PF01546 Peptidase family M20/M25/M40 CJ259_RS12180 PF07687 Peptidase dimerisation domain CJ259_RS12185 PF00296 Luciferase-like monooxygenase CJ259_RS12190 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ259_RS12200 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS12205 PF00005 ABC transporter CJ259_RS12215 PF13417 Glutathione S-transferase, N-terminal domain CJ259_RS12220 PF01361 Tautomerase enzyme CJ259_RS12240 PF11471 Maltoporin periplasmic N-terminal extension CJ259_RS12240 PF02264 LamB porin CJ259_RS12255 PF12833 Helix-turn-helix domain CJ259_RS12255 PF02311 AraC-like ligand binding domain CJ259_RS12260 PF01613 Flavin reductase like domain CJ259_RS12265 PF17912 MalK OB fold domain CJ259_RS12265 PF00005 ABC transporter CJ259_RS12275 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS12280 PF00797 N-acetyltransferase CJ259_RS12285 PF02665 Nitrate reductase gamma subunit CJ259_RS12290 PF02613 Nitrate reductase delta subunit CJ259_RS12295 PF13247 4Fe-4S dicluster domain CJ259_RS12295 PF14711 Respiratory nitrate reductase beta C-terminal CJ259_RS12300 PF14710 Respiratory nitrate reductase alpha N-terminal CJ259_RS12300 PF00384 Molybdopterin oxidoreductase CJ259_RS12300 PF01568 Molydopterin dinucleotide binding domain CJ259_RS12305 PF07690 Major Facilitator Superfamily CJ259_RS12315 PF07690 Major Facilitator Superfamily CJ259_RS12320 PF09339 IclR helix-turn-helix domain CJ259_RS12320 PF01614 Bacterial transcriptional regulator CJ259_RS12325 PF13378 Enolase C-terminal domain-like CJ259_RS12325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJ259_RS12330 PF02426 Muconolactone delta-isomerase CJ259_RS12335 PF04444 Catechol dioxygenase N terminus CJ259_RS12335 PF00775 Dioxygenase CJ259_RS12340 PF00355 Rieske [2Fe-2S] domain CJ259_RS12340 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CJ259_RS12345 PF00866 Ring hydroxylating beta subunit CJ259_RS12350 PF00175 Oxidoreductase NAD-binding domain CJ259_RS12350 PF00970 Oxidoreductase FAD-binding domain CJ259_RS12350 PF00111 2Fe-2S iron-sulfur cluster binding domain CJ259_RS12355 PF00106 short chain dehydrogenase CJ259_RS12360 PF00892 EamA-like transporter family CJ259_RS12365 PF00384 Molybdopterin oxidoreductase CJ259_RS12365 PF01568 Molydopterin dinucleotide binding domain CJ259_RS12365 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJ259_RS12370 PF00384 Molybdopterin oxidoreductase CJ259_RS12370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJ259_RS12370 PF01568 Molydopterin dinucleotide binding domain CJ259_RS12375 PF09163 Formate dehydrogenase N, transmembrane CJ259_RS12375 PF12800 4Fe-4S binding domain CJ259_RS12375 PF13247 4Fe-4S dicluster domain CJ259_RS12380 PF01292 Prokaryotic cytochrome b561 CJ259_RS12395 PF03976 Polyphosphate kinase 2 (PPK2) CJ259_RS12405 PF07690 Major Facilitator Superfamily CJ259_RS12415 PF00296 Luciferase-like monooxygenase CJ259_RS12420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ259_RS12420 PF00005 ABC transporter CJ259_RS12425 PF12911 N-terminal TM domain of oligopeptide transport permease C CJ259_RS12425 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS12430 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS12435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ259_RS12440 PF08240 Alcohol dehydrogenase GroES-like domain CJ259_RS12440 PF00107 Zinc-binding dehydrogenase CJ259_RS12445 PF00719 Inorganic pyrophosphatase CJ259_RS12455 PF12848 ABC transporter CJ259_RS12455 PF00005 ABC transporter CJ259_RS12465 PF03949 Malic enzyme, NAD binding domain CJ259_RS12465 PF00390 Malic enzyme, N-terminal domain CJ259_RS12470 PF08136 30S ribosomal protein subunit S22 family CJ259_RS12480 PF03466 LysR substrate binding domain CJ259_RS12480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS12485 PF10820 Protein of unknown function (DUF2543) CJ259_RS12495 PF10685 Stress-induced bacterial acidophilic repeat motif CJ259_RS12515 PF05974 Domain of unknown function (DUF892) CJ259_RS12525 PF16657 Maltogenic Amylase, C-terminal domain CJ259_RS12525 PF00128 Alpha amylase, catalytic domain CJ259_RS12530 PF00106 short chain dehydrogenase CJ259_RS12535 PF04239 Protein of unknown function (DUF421) CJ259_RS12545 PF04076 Bacterial OB fold (BOF) protein CJ259_RS12550 PF02566 OsmC-like protein CJ259_RS12570 PF01545 Cation efflux family CJ259_RS12570 PF16916 Dimerisation domain of Zinc Transporter CJ259_RS12575 PF01062 Bestrophin, RFP-TM, chloride channel CJ259_RS12580 PF00384 Molybdopterin oxidoreductase CJ259_RS12585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS12585 PF03466 LysR substrate binding domain CJ259_RS12590 PF02378 Phosphotransferase system, EIIC CJ259_RS12615 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJ259_RS12620 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CJ259_RS12625 PF00083 Sugar (and other) transporter CJ259_RS12635 PF02308 MgtC family CJ259_RS12640 PF03969 AFG1-like ATPase CJ259_RS12645 PF00141 Peroxidase CJ259_RS12650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS12650 PF03466 LysR substrate binding domain CJ259_RS12665 PF03717 Penicillin-binding Protein dimerisation domain CJ259_RS12665 PF00905 Penicillin binding protein transpeptidase domain CJ259_RS12670 PF00117 Glutamine amidotransferase class-I CJ259_RS12670 PF00958 GMP synthase C terminal domain CJ259_RS12670 PF02540 NAD synthase CJ259_RS12675 PF00675 Insulinase (Peptidase family M16) CJ259_RS12680 PF04055 Radical SAM superfamily CJ259_RS12680 PF13186 Iron-sulfur cluster-binding domain CJ259_RS12685 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CJ259_RS12690 PF03070 TENA/THI-4/PQQC family CJ259_RS12695 PF12706 Beta-lactamase superfamily domain CJ259_RS12700 PF08042 PqqA family CJ259_RS12705 PF01244 Membrane dipeptidase (Peptidase family M19) CJ259_RS12710 PF00561 alpha/beta hydrolase fold CJ259_RS12715 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS12715 PF00072 Response regulator receiver domain CJ259_RS12720 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS12720 PF00672 HAMP domain CJ259_RS12720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS12725 PF00578 AhpC/TSA family CJ259_RS12725 PF02683 Cytochrome C biogenesis protein transmembrane region CJ259_RS12725 PF17991 Thioredoxin like C-terminal domain CJ259_RS12735 PF00282 Pyridoxal-dependent decarboxylase conserved domain CJ259_RS12740 PF00202 Aminotransferase class-III CJ259_RS12745 PF09084 NMT1/THI5 like CJ259_RS12750 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS12755 PF00005 ABC transporter CJ259_RS12760 PF03070 TENA/THI-4/PQQC family CJ259_RS12775 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJ259_RS12775 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJ259_RS12785 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS12790 PF08448 PAS fold CJ259_RS12790 PF00990 Diguanylate cyclase, GGDEF domain CJ259_RS12795 PF01979 Amidohydrolase family CJ259_RS12800 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CJ259_RS12810 PF01177 Asp/Glu/Hydantoin racemase CJ259_RS12835 PF00561 alpha/beta hydrolase fold CJ259_RS12845 PF00117 Glutamine amidotransferase class-I CJ259_RS12850 PF12833 Helix-turn-helix domain CJ259_RS12850 PF02311 AraC-like ligand binding domain CJ259_RS12865 PF02801 Beta-ketoacyl synthase, C-terminal domain CJ259_RS12865 PF00109 Beta-ketoacyl synthase, N-terminal domain CJ259_RS12880 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJ259_RS12880 PF02774 Semialdehyde dehydrogenase, dimerisation domain CJ259_RS12895 PF01425 Amidase CJ259_RS12920 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS12925 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS12930 PF00005 ABC transporter CJ259_RS12935 PF00266 Aminotransferase class-V CJ259_RS12940 PF07687 Peptidase dimerisation domain CJ259_RS12940 PF01546 Peptidase family M20/M25/M40 CJ259_RS12945 PF03060 Nitronate monooxygenase CJ259_RS12950 PF03466 LysR substrate binding domain CJ259_RS12950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS12960 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJ259_RS12965 PF13454 FAD-NAD(P)-binding CJ259_RS12970 PF00083 Sugar (and other) transporter CJ259_RS12970 PF07690 Major Facilitator Superfamily CJ259_RS12985 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS13000 PF07690 Major Facilitator Superfamily CJ259_RS13010 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS13015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJ259_RS13025 PF03611 PTS system sugar-specific permease component CJ259_RS13030 PF00834 Ribulose-phosphate 3 epimerase family CJ259_RS13040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJ259_RS13045 PF02378 Phosphotransferase system, EIIC CJ259_RS13045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJ259_RS13050 PF01810 LysE type translocator CJ259_RS13060 PF03466 LysR substrate binding domain CJ259_RS13060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS13065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS13065 PF03466 LysR substrate binding domain CJ259_RS13070 PF00753 Metallo-beta-lactamase superfamily CJ259_RS13080 PF01546 Peptidase family M20/M25/M40 CJ259_RS13080 PF07687 Peptidase dimerisation domain CJ259_RS13090 PF02126 Phosphotriesterase family CJ259_RS13095 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS13100 PF00005 ABC transporter CJ259_RS13105 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS13115 PF00294 pfkB family carbohydrate kinase CJ259_RS13135 PF04972 BON domain CJ259_RS13135 PF01476 LysM domain CJ259_RS13140 PF07690 Major Facilitator Superfamily CJ259_RS13155 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS13155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS13155 PF00672 HAMP domain CJ259_RS13160 PF14532 Sigma-54 interaction domain CJ259_RS13160 PF00072 Response regulator receiver domain CJ259_RS13160 PF02954 Bacterial regulatory protein, Fis family CJ259_RS13165 PF13673 Acetyltransferase (GNAT) domain CJ259_RS13165 PF04229 GrpB protein CJ259_RS13170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS13170 PF03466 LysR substrate binding domain CJ259_RS13175 PF00248 Aldo/keto reductase family CJ259_RS13180 PF00248 Aldo/keto reductase family CJ259_RS13185 PF08450 SMP-30/Gluconolactonase/LRE-like region CJ259_RS13190 PF00248 Aldo/keto reductase family CJ259_RS13205 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS13205 PF00155 Aminotransferase class I and II CJ259_RS13220 PF00367 phosphotransferase system, EIIB CJ259_RS13220 PF02378 Phosphotransferase system, EIIC CJ259_RS13220 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CJ259_RS13225 PF00232 Glycosyl hydrolase family 1 CJ259_RS13235 PF08220 DeoR-like helix-turn-helix domain CJ259_RS13235 PF00455 DeoR C terminal sensor domain CJ259_RS13240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJ259_RS13240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJ259_RS13245 PF01791 DeoC/LacD family aldolase CJ259_RS13250 PF00455 DeoR C terminal sensor domain CJ259_RS13250 PF08220 DeoR-like helix-turn-helix domain CJ259_RS13255 PF00834 Ribulose-phosphate 3 epimerase family CJ259_RS13260 PF00294 pfkB family carbohydrate kinase CJ259_RS13265 PF07690 Major Facilitator Superfamily CJ259_RS13275 PF13193 AMP-binding enzyme C-terminal domain CJ259_RS13275 PF00501 AMP-binding enzyme CJ259_RS13280 PF01144 Coenzyme A transferase CJ259_RS13290 PF00108 Thiolase, N-terminal domain CJ259_RS13290 PF02803 Thiolase, C-terminal domain CJ259_RS13295 PF07690 Major Facilitator Superfamily CJ259_RS13300 PF08450 SMP-30/Gluconolactonase/LRE-like region CJ259_RS13310 PF02595 Glycerate kinase family CJ259_RS13315 PF13556 PucR C-terminal helix-turn-helix domain CJ259_RS13315 PF17853 GGDEF-like domain CJ259_RS13315 PF05651 Putative sugar diacid recognition CJ259_RS13320 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CJ259_RS13320 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJ259_RS13325 PF03466 LysR substrate binding domain CJ259_RS13325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS13335 PF07729 FCD domain CJ259_RS13335 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS13340 PF00367 phosphotransferase system, EIIB CJ259_RS13340 PF02378 Phosphotransferase system, EIIC CJ259_RS13345 PF11975 Family 4 glycosyl hydrolase C-terminal domain CJ259_RS13345 PF02056 Family 4 glycosyl hydrolase CJ259_RS13350 PF00083 Sugar (and other) transporter CJ259_RS13355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJ259_RS13355 PF00381 PTS HPr component phosphorylation site CJ259_RS13365 PF00756 Putative esterase CJ259_RS13370 PF13188 PAS domain CJ259_RS13370 PF03707 Bacterial signalling protein N terminal repeat CJ259_RS13370 PF00990 Diguanylate cyclase, GGDEF domain CJ259_RS13370 PF00563 EAL domain CJ259_RS13385 PF00557 Metallopeptidase family M24 CJ259_RS13400 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJ259_RS13400 PF02753 Pili assembly chaperone PapD, C-terminal domain CJ259_RS13405 PF13953 PapC C-terminal domain CJ259_RS13405 PF00577 Outer membrane usher protein CJ259_RS13405 PF13954 PapC N-terminal domain CJ259_RS13420 PF02638 Glycosyl hydrolase-like 10 CJ259_RS13425 PF13657 HipA N-terminal domain CJ259_RS13425 PF07804 HipA-like C-terminal domain CJ259_RS13430 PF01381 Helix-turn-helix CJ259_RS13435 PF00576 HIUase/Transthyretin family CJ259_RS13440 PF09349 OHCU decarboxylase CJ259_RS13440 PF01014 Uricase CJ259_RS13445 PF00860 Permease family CJ259_RS13450 PF01494 FAD binding domain CJ259_RS13455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS13455 PF03466 LysR substrate binding domain CJ259_RS13460 PF00355 Rieske [2Fe-2S] domain CJ259_RS13465 PF00111 2Fe-2S iron-sulfur cluster binding domain CJ259_RS13470 PF07690 Major Facilitator Superfamily CJ259_RS13475 PF12833 Helix-turn-helix domain CJ259_RS13490 PF09905 DNA-binding protein VF530 CJ259_RS13500 PF03180 NLPA lipoprotein CJ259_RS13505 PF09383 NIL domain CJ259_RS13505 PF00005 ABC transporter CJ259_RS13510 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS13515 PF03060 Nitronate monooxygenase CJ259_RS13520 PF03466 LysR substrate binding domain CJ259_RS13520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS13540 PF07690 Major Facilitator Superfamily CJ259_RS13550 PF13649 Methyltransferase domain CJ259_RS13590 PF00583 Acetyltransferase (GNAT) family CJ259_RS13595 PF01232 Mannitol dehydrogenase Rossmann domain CJ259_RS13595 PF08125 Mannitol dehydrogenase C-terminal domain CJ259_RS13605 PF00990 Diguanylate cyclase, GGDEF domain CJ259_RS13610 PF13811 Domain of unknown function (DUF4186) CJ259_RS13615 PF04960 Glutaminase CJ259_RS13620 PF00171 Aldehyde dehydrogenase family CJ259_RS13625 PF03466 LysR substrate binding domain CJ259_RS13625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS13630 PF00583 Acetyltransferase (GNAT) family CJ259_RS13635 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CJ259_RS13635 PF00056 lactate/malate dehydrogenase, NAD binding domain CJ259_RS13640 PF00455 DeoR C terminal sensor domain CJ259_RS13640 PF08220 DeoR-like helix-turn-helix domain CJ259_RS13645 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CJ259_RS13650 PF07005 Sugar-binding N-terminal domain CJ259_RS13650 PF17042 Nucleotide-binding C-terminal domain CJ259_RS13655 PF00465 Iron-containing alcohol dehydrogenase CJ259_RS13660 PF00701 Dihydrodipicolinate synthetase family CJ259_RS13665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJ259_RS13665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJ259_RS13665 PF01842 ACT domain CJ259_RS13670 PF07690 Major Facilitator Superfamily CJ259_RS13675 PF02567 Phenazine biosynthesis-like protein CJ259_RS13680 PF07690 Major Facilitator Superfamily CJ259_RS13685 PF01914 MarC family integral membrane protein CJ259_RS13690 PF01047 MarR family CJ259_RS13695 PF12833 Helix-turn-helix domain CJ259_RS13700 PF13999 MarB protein CJ259_RS13705 PF00892 EamA-like transporter family CJ259_RS13710 PF07690 Major Facilitator Superfamily CJ259_RS13720 PF00005 ABC transporter CJ259_RS13725 PF00005 ABC transporter CJ259_RS13725 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJ259_RS13730 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS13735 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS13740 PF00158 Sigma-54 interaction domain CJ259_RS13740 PF13188 PAS domain CJ259_RS13740 PF02954 Bacterial regulatory protein, Fis family CJ259_RS13745 PF01717 Cobalamin-independent synthase, Catalytic domain CJ259_RS13755 PF01965 DJ-1/PfpI family CJ259_RS13755 PF12833 Helix-turn-helix domain CJ259_RS13770 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS13775 PF02929 Beta galactosidase small chain CJ259_RS13775 PF00703 Glycosyl hydrolases family 2 CJ259_RS13775 PF02837 Glycosyl hydrolases family 2, sugar binding domain CJ259_RS13775 PF16353 Domain of unknown function(DUF4981) CJ259_RS13775 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CJ259_RS13780 PF01306 LacY proton/sugar symporter CJ259_RS13785 PF02463 RecF/RecN/SMC N terminal domain CJ259_RS13800 PF00455 DeoR C terminal sensor domain CJ259_RS13800 PF08220 DeoR-like helix-turn-helix domain CJ259_RS13805 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJ259_RS13805 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CJ259_RS13810 PF07005 Sugar-binding N-terminal domain CJ259_RS13810 PF17042 Nucleotide-binding C-terminal domain CJ259_RS13815 PF00596 Class II Aldolase and Adducin N-terminal domain CJ259_RS13820 PF01261 Xylose isomerase-like TIM barrel CJ259_RS13825 PF02447 GntP family permease CJ259_RS13830 PF12833 Helix-turn-helix domain CJ259_RS13845 PF00563 EAL domain CJ259_RS13845 PF04940 Sensors of blue-light using FAD CJ259_RS13850 PF02464 Competence-damaged protein CJ259_RS13855 PF00011 Hsp20/alpha crystallin family CJ259_RS13865 PF00072 Response regulator receiver domain CJ259_RS13865 PF00196 Bacterial regulatory proteins, luxR family CJ259_RS13870 PF02586 SOS response associated peptidase (SRAP) CJ259_RS13875 PF02311 AraC-like ligand binding domain CJ259_RS13875 PF12833 Helix-turn-helix domain CJ259_RS13885 PF01432 Peptidase family M3 CJ259_RS13890 PF00106 short chain dehydrogenase CJ259_RS13895 PF07729 FCD domain CJ259_RS13895 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS13900 PF00582 Universal stress protein family CJ259_RS13905 PF01232 Mannitol dehydrogenase Rossmann domain CJ259_RS13905 PF08125 Mannitol dehydrogenase C-terminal domain CJ259_RS13910 PF07690 Major Facilitator Superfamily CJ259_RS13915 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CJ259_RS13920 PF06932 Protein of unknown function (DUF1283) CJ259_RS13925 PF13302 Acetyltransferase (GNAT) domain CJ259_RS13930 PF06788 Uncharacterised protein family (UPF0257) CJ259_RS13935 PF06649 Protein of unknown function (DUF1161) CJ259_RS13940 PF01568 Molydopterin dinucleotide binding domain CJ259_RS13940 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJ259_RS13940 PF00384 Molybdopterin oxidoreductase CJ259_RS13945 PF13247 4Fe-4S dicluster domain CJ259_RS13945 PF12800 4Fe-4S binding domain CJ259_RS13950 PF04976 DMSO reductase anchor subunit (DmsC) CJ259_RS13955 PF02613 Nitrate reductase delta subunit CJ259_RS13960 PF00654 Voltage gated chloride channel CJ259_RS13970 PF00480 ROK family CJ259_RS13975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS13975 PF03466 LysR substrate binding domain CJ259_RS13980 PF07690 Major Facilitator Superfamily CJ259_RS13985 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CJ259_RS13995 PF00089 Trypsin CJ259_RS14005 PF00893 Small Multidrug Resistance protein CJ259_RS14010 PF00893 Small Multidrug Resistance protein CJ259_RS14015 PF01594 AI-2E family transporter CJ259_RS14020 PF16957 Malonate decarboxylase, alpha subunit, transporter CJ259_RS14025 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CJ259_RS14030 PF06857 Malonate decarboxylase delta subunit (MdcD) CJ259_RS14035 PF01039 Carboxyl transferase domain CJ259_RS14045 PF03547 Membrane transport protein CJ259_RS14050 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG CJ259_RS14055 PF00698 Acyl transferase domain CJ259_RS14060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS14060 PF03466 LysR substrate binding domain CJ259_RS14065 PF06039 Malate:quinone oxidoreductase (Mqo) CJ259_RS14070 PF13580 SIS domain CJ259_RS14080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS14080 PF17203 Single cache domain 3 CJ259_RS14080 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CJ259_RS14080 PF00989 PAS fold CJ259_RS14085 PF00072 Response regulator receiver domain CJ259_RS14090 PF02424 ApbE family CJ259_RS14095 PF14537 Cytochrome c3 CJ259_RS14095 PF00890 FAD binding domain CJ259_RS14105 PF00939 Sodium:sulfate symporter transmembrane region CJ259_RS14110 PF05683 Fumarase C-terminus CJ259_RS14110 PF05681 Fumarate hydratase (Fumerase) CJ259_RS14125 PF02627 Carboxymuconolactone decarboxylase family CJ259_RS14130 PF12146 Serine aminopeptidase, S33 CJ259_RS14135 PF00206 Lyase CJ259_RS14135 PF10397 Adenylosuccinate lyase C-terminus CJ259_RS14140 PF02803 Thiolase, C-terminal domain CJ259_RS14140 PF00108 Thiolase, N-terminal domain CJ259_RS14145 PF01144 Coenzyme A transferase CJ259_RS14150 PF01144 Coenzyme A transferase CJ259_RS14155 PF01614 Bacterial transcriptional regulator CJ259_RS14155 PF09339 IclR helix-turn-helix domain CJ259_RS14160 PF01713 Smr domain CJ259_RS14165 PF03466 LysR substrate binding domain CJ259_RS14165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS14170 PF01546 Peptidase family M20/M25/M40 CJ259_RS14170 PF07687 Peptidase dimerisation domain CJ259_RS14175 PF01546 Peptidase family M20/M25/M40 CJ259_RS14180 PF03806 AbgT putative transporter family CJ259_RS14190 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJ259_RS14190 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CJ259_RS14195 PF00027 Cyclic nucleotide-binding domain CJ259_RS14195 PF00325 Bacterial regulatory proteins, crp family CJ259_RS14200 PF00582 Universal stress protein family CJ259_RS14205 PF15930 Domain of unknown function CJ259_RS14210 PF02233 NAD(P) transhydrogenase beta subunit CJ259_RS14215 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CJ259_RS14215 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CJ259_RS14215 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CJ259_RS14225 PF07338 Protein of unknown function (DUF1471) CJ259_RS14235 PF13520 Amino acid permease CJ259_RS14245 PF06942 GlpM protein CJ259_RS14250 PF00072 Response regulator receiver domain CJ259_RS14250 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS14260 PF00672 HAMP domain CJ259_RS14260 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS14260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS14265 PF05472 DNA replication terminus site-binding protein (Ter protein) CJ259_RS14270 PF10415 Fumarase C C-terminus CJ259_RS14270 PF00206 Lyase CJ259_RS14275 PF05681 Fumarate hydratase (Fumerase) CJ259_RS14275 PF05683 Fumarase C-terminus CJ259_RS14280 PF01238 Phosphomannose isomerase type I CJ259_RS14285 PF06097 Bacterial protein of unknown function (DUF945) CJ259_RS14290 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS14290 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CJ259_RS14295 PF00367 phosphotransferase system, EIIB CJ259_RS14295 PF02378 Phosphotransferase system, EIIC CJ259_RS14300 PF00155 Aminotransferase class I and II CJ259_RS14310 PF14001 YdfZ protein CJ259_RS14325 PF04143 Sulphur transport CJ259_RS14330 PF01206 Sulfurtransferase TusA CJ259_RS14335 PF07166 Protein of unknown function (DUF1398) CJ259_RS14340 PF01679 Proteolipid membrane potential modulator CJ259_RS14345 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CJ259_RS14345 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CJ259_RS14350 PF00171 Aldehyde dehydrogenase family CJ259_RS14355 PF02698 DUF218 domain CJ259_RS14360 PF07690 Major Facilitator Superfamily CJ259_RS14360 PF00083 Sugar (and other) transporter CJ259_RS14365 PF00324 Amino acid permease CJ259_RS14370 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CJ259_RS14375 PF04996 Succinylarginine dihydrolase CJ259_RS14380 PF00171 Aldehyde dehydrogenase family CJ259_RS14385 PF04958 Arginine N-succinyltransferase beta subunit CJ259_RS14390 PF00202 Aminotransferase class-III CJ259_RS14395 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CJ259_RS14395 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CJ259_RS14400 PF00248 Aldo/keto reductase family CJ259_RS14405 PF03466 LysR substrate binding domain CJ259_RS14405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS14420 PF13533 Biotin-lipoyl like CJ259_RS14425 PF02321 Outer membrane efflux protein CJ259_RS14430 PF01596 O-methyltransferase CJ259_RS14435 PF11898 Domain of unknown function (DUF3418) CJ259_RS14435 PF00270 DEAD/DEAH box helicase CJ259_RS14435 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CJ259_RS14435 PF04408 Helicase associated domain (HA2) CJ259_RS14435 PF00271 Helicase conserved C-terminal domain CJ259_RS14440 PF02525 Flavodoxin-like fold CJ259_RS14450 PF00132 Bacterial transferase hexapeptide (six repeats) CJ259_RS14455 PF08223 PaaX-like protein C-terminal domain CJ259_RS14455 PF07848 PaaX-like protein CJ259_RS14460 PF00501 AMP-binding enzyme CJ259_RS14460 PF14535 AMP-binding enzyme C-terminal domain CJ259_RS14465 PF02803 Thiolase, C-terminal domain CJ259_RS14465 PF00108 Thiolase, N-terminal domain CJ259_RS14470 PF03061 Thioesterase superfamily CJ259_RS14475 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJ259_RS14475 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJ259_RS14475 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CJ259_RS14480 PF00378 Enoyl-CoA hydratase/isomerase CJ259_RS14485 PF00378 Enoyl-CoA hydratase/isomerase CJ259_RS14490 PF00970 Oxidoreductase FAD-binding domain CJ259_RS14490 PF00111 2Fe-2S iron-sulfur cluster binding domain CJ259_RS14490 PF00175 Oxidoreductase NAD-binding domain CJ259_RS14495 PF01883 Iron-sulfur cluster assembly protein CJ259_RS14500 PF05138 Phenylacetic acid catabolic protein CJ259_RS14505 PF06243 Phenylacetic acid degradation B CJ259_RS14510 PF05138 Phenylacetic acid catabolic protein CJ259_RS14515 PF01575 MaoC like domain CJ259_RS14515 PF00171 Aldehyde dehydrogenase family CJ259_RS14525 PF07833 Copper amine oxidase N-terminal domain CJ259_RS14525 PF02728 Copper amine oxidase, N3 domain CJ259_RS14525 PF01179 Copper amine oxidase, enzyme domain CJ259_RS14525 PF02727 Copper amine oxidase, N2 domain CJ259_RS14535 PF02558 Ketopantoate reductase PanE/ApbA CJ259_RS14535 PF08546 Ketopantoate reductase PanE/ApbA C terminal CJ259_RS14540 PF00171 Aldehyde dehydrogenase family CJ259_RS14545 PF12833 Helix-turn-helix domain CJ259_RS14545 PF14525 AraC-binding-like domain CJ259_RS14550 PF07027 Protein of unknown function (DUF1318) CJ259_RS14555 PF13617 YnbE-like lipoprotein CJ259_RS14560 PF11739 Dicarboxylate transport CJ259_RS14565 PF09335 SNARE associated Golgi protein CJ259_RS14570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJ259_RS14570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJ259_RS14575 PF03724 META domain CJ259_RS14580 PF03891 Domain of unknown function (DUF333) CJ259_RS14590 PF10371 Domain of unknown function CJ259_RS14590 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CJ259_RS14590 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CJ259_RS14590 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CJ259_RS14590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJ259_RS14595 PF00267 Gram-negative porin CJ259_RS14605 PF00582 Universal stress protein family CJ259_RS14610 PF01171 PP-loop family CJ259_RS14615 PF00271 Helicase conserved C-terminal domain CJ259_RS14615 PF00270 DEAD/DEAH box helicase CJ259_RS14615 PF03880 DbpA RNA binding domain CJ259_RS14620 PF01544 CorA-like Mg2+ transporter protein CJ259_RS14630 PF08220 DeoR-like helix-turn-helix domain CJ259_RS14630 PF00455 DeoR C terminal sensor domain CJ259_RS14635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJ259_RS14635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJ259_RS14650 PF00324 Amino acid permease CJ259_RS14655 PF01037 Lrp/AsnC ligand binding domain CJ259_RS14665 PF00155 Aminotransferase class I and II CJ259_RS14670 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS14675 PF09383 NIL domain CJ259_RS14675 PF00005 ABC transporter CJ259_RS14680 PF03180 NLPA lipoprotein CJ259_RS14685 PF00155 Aminotransferase class I and II CJ259_RS14690 PF00107 Zinc-binding dehydrogenase CJ259_RS14690 PF08240 Alcohol dehydrogenase GroES-like domain CJ259_RS14695 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS14705 PF00753 Metallo-beta-lactamase superfamily CJ259_RS14710 PF03466 LysR substrate binding domain CJ259_RS14710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS14715 PF03466 LysR substrate binding domain CJ259_RS14715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS14740 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS14815 PF04717 Type VI secretion system, phage-baseplate injector CJ259_RS14815 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CJ259_RS14815 PF13296 Putative type VI secretion system Rhs element Vgr CJ259_RS14820 PF17871 AAA lid domain CJ259_RS14820 PF00004 ATPase family associated with various cellular activities (AAA) CJ259_RS14820 PF07724 AAA domain (Cdc48 subfamily) CJ259_RS14820 PF10431 C-terminal, D2-small domain, of ClpB protein CJ259_RS14830 PF00691 OmpA family CJ259_RS14830 PF13488 Glycine zipper CJ259_RS14845 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CJ259_RS14855 PF01965 DJ-1/PfpI family CJ259_RS14860 PF01966 HD domain CJ259_RS14870 PF03466 LysR substrate binding domain CJ259_RS14870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS14890 PF00248 Aldo/keto reductase family CJ259_RS14895 PF07690 Major Facilitator Superfamily CJ259_RS14900 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CJ259_RS14905 PF03466 LysR substrate binding domain CJ259_RS14905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS14920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ259_RS14925 PF00246 Zinc carboxypeptidase CJ259_RS14930 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJ259_RS14930 PF13378 Enolase C-terminal domain-like CJ259_RS14935 PF08534 Redoxin CJ259_RS14940 PF05145 Transition state regulatory protein AbrB CJ259_RS14945 PF18024 Helix-turn-helix domain CJ259_RS14945 PF00158 Sigma-54 interaction domain CJ259_RS14955 PF03466 LysR substrate binding domain CJ259_RS14955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS14960 PF05128 Domain of unknown function (DUF697) CJ259_RS14965 PF04317 YcjX-like family, DUF463 CJ259_RS14970 PF09584 Phage shock protein PspD (Phageshock_PspD) CJ259_RS14975 PF04024 PspC domain CJ259_RS14980 PF06667 Phage shock protein B CJ259_RS14985 PF04012 PspA/IM30 family CJ259_RS14990 PF00158 Sigma-54 interaction domain CJ259_RS14990 PF02954 Bacterial regulatory protein, Fis family CJ259_RS14995 PF07690 Major Facilitator Superfamily CJ259_RS15000 PF07687 Peptidase dimerisation domain CJ259_RS15000 PF01546 Peptidase family M20/M25/M40 CJ259_RS15005 PF12833 Helix-turn-helix domain CJ259_RS15015 PF13460 NAD(P)H-binding CJ259_RS15020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ259_RS15025 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS15030 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS15030 PF12911 N-terminal TM domain of oligopeptide transport permease C CJ259_RS15035 PF00005 ABC transporter CJ259_RS15035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ259_RS15040 PF00005 ABC transporter CJ259_RS15045 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CJ259_RS15050 PF05962 HutD CJ259_RS15065 PF17876 Cold shock domain CJ259_RS15065 PF08206 Ribonuclease B OB domain CJ259_RS15065 PF00575 S1 RNA binding domain CJ259_RS15065 PF00773 RNB domain CJ259_RS15075 PF08220 DeoR-like helix-turn-helix domain CJ259_RS15075 PF00455 DeoR C terminal sensor domain CJ259_RS15080 PF05433 Glycine zipper 2TM domain CJ259_RS15085 PF01253 Translation initiation factor SUI1 CJ259_RS15090 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CJ259_RS15095 PF18073 Rubredoxin metal binding domain CJ259_RS15100 PF06305 Lipopolysaccharide assembly protein A domain CJ259_RS15105 PF01569 PAP2 superfamily CJ259_RS15110 PF00925 GTP cyclohydrolase II CJ259_RS15115 PF00694 Aconitase C-terminal domain CJ259_RS15115 PF00330 Aconitase family (aconitate hydratase) CJ259_RS15130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS15130 PF03466 LysR substrate binding domain CJ259_RS15135 PF01396 Topoisomerase DNA binding C4 zinc finger CJ259_RS15135 PF01751 Toprim domain CJ259_RS15135 PF08272 Topoisomerase I zinc-ribbon-like CJ259_RS15135 PF01131 DNA topoisomerase CJ259_RS15140 PF10692 Protein of unknown function (DUF2498) CJ259_RS15145 PF08496 Peptidase family S49 N-terminal CJ259_RS15145 PF01343 Peptidase family S49 CJ259_RS15155 PF00106 short chain dehydrogenase CJ259_RS15160 PF12557 Cob(I)alamin adenosyltransferase N terminal CJ259_RS15160 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CJ259_RS15165 PF00849 RNA pseudouridylate synthase CJ259_RS15165 PF01479 S4 domain CJ259_RS15170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS15170 PF03466 LysR substrate binding domain CJ259_RS15180 PF01300 Telomere recombination CJ259_RS15185 PF02811 PHP domain CJ259_RS15190 PF04715 Anthranilate synthase component I, N terminal region CJ259_RS15190 PF00425 chorismate binding enzyme CJ259_RS15195 PF00117 Glutamine amidotransferase class-I CJ259_RS15195 PF02885 Glycosyl transferase family, helical bundle domain CJ259_RS15195 PF00591 Glycosyl transferase family, a/b domain CJ259_RS15200 PF00218 Indole-3-glycerol phosphate synthase CJ259_RS15200 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CJ259_RS15205 PF00291 Pyridoxal-phosphate dependent enzyme CJ259_RS15210 PF00290 Tryptophan synthase alpha chain CJ259_RS15230 PF00106 short chain dehydrogenase CJ259_RS15235 PF00593 TonB dependent receptor CJ259_RS15235 PF07715 TonB-dependent Receptor Plug Domain CJ259_RS15240 PF13640 2OG-Fe(II) oxygenase superfamily CJ259_RS15240 PF18331 PKHD-type hydroxylase C-terminal domain CJ259_RS15245 PF03922 OmpW family CJ259_RS15250 PF03692 Putative zinc- or iron-chelating domain CJ259_RS15260 PF04279 Intracellular septation protein A CJ259_RS15265 PF07715 TonB-dependent Receptor Plug Domain CJ259_RS15265 PF00593 TonB dependent receptor CJ259_RS15270 PF03061 Thioesterase superfamily CJ259_RS15275 PF14002 YniB-like protein CJ259_RS15280 PF13419 Haloacid dehalogenase-like hydrolase CJ259_RS15290 PF04307 LexA-binding, inner membrane-associated putative hydrolase CJ259_RS15295 PF00375 Sodium:dicarboxylate symporter family CJ259_RS15300 PF10729 Cell division activator CedA CJ259_RS15305 PF18011 C-terminal domain found in long catalases CJ259_RS15305 PF00199 Catalase CJ259_RS15305 PF06628 Catalase-related immune-responsive CJ259_RS15310 PF04794 YdjC-like protein CJ259_RS15315 PF11975 Family 4 glycosyl hydrolase C-terminal domain CJ259_RS15315 PF02056 Family 4 glycosyl hydrolase CJ259_RS15320 PF07883 Cupin domain CJ259_RS15320 PF12833 Helix-turn-helix domain CJ259_RS15325 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CJ259_RS15330 PF02378 Phosphotransferase system, EIIC CJ259_RS15335 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJ259_RS15340 PF04355 SmpA / OmlA family CJ259_RS15345 PF02540 NAD synthase CJ259_RS15355 PF07813 LTXXQ motif family protein CJ259_RS15360 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CJ259_RS15365 PF04996 Succinylarginine dihydrolase CJ259_RS15370 PF00171 Aldehyde dehydrogenase family CJ259_RS15375 PF04958 Arginine N-succinyltransferase beta subunit CJ259_RS15380 PF00202 Aminotransferase class-III CJ259_RS15385 PF03372 Endonuclease/Exonuclease/phosphatase family CJ259_RS15390 PF09335 SNARE associated Golgi protein CJ259_RS15395 PF09335 SNARE associated Golgi protein CJ259_RS15400 PF02627 Carboxymuconolactone decarboxylase family CJ259_RS15405 PF13416 Bacterial extracellular solute-binding protein CJ259_RS15410 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS15415 PF00005 ABC transporter CJ259_RS15420 PF00581 Rhodanese-like domain CJ259_RS15425 PF01066 CDP-alcohol phosphatidyltransferase CJ259_RS15430 PF00293 NUDIX domain CJ259_RS15435 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CJ259_RS15435 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CJ259_RS15440 PF00109 Beta-ketoacyl synthase, N-terminal domain CJ259_RS15440 PF16197 Ketoacyl-synthetase C-terminal extension CJ259_RS15440 PF08659 KR domain CJ259_RS15440 PF08240 Alcohol dehydrogenase GroES-like domain CJ259_RS15440 PF02801 Beta-ketoacyl synthase, C-terminal domain CJ259_RS15440 PF00550 Phosphopantetheine attachment site CJ259_RS15440 PF14765 Polyketide synthase dehydratase CJ259_RS15440 PF00698 Acyl transferase domain CJ259_RS15445 PF01751 Toprim domain CJ259_RS15445 PF01131 DNA topoisomerase CJ259_RS15450 PF02769 AIR synthase related protein, C-terminal domain CJ259_RS15450 PF00586 AIR synthase related protein, N-terminal domain CJ259_RS15455 PF01569 PAP2 superfamily CJ259_RS15470 PF00881 Nitroreductase family CJ259_RS15475 PF01343 Peptidase family S49 CJ259_RS15480 PF17763 Glutaminase/Asparaginase C-terminal domain CJ259_RS15480 PF00710 Asparaginase, N-terminal CJ259_RS15485 PF00857 Isochorismatase family CJ259_RS15490 PF00041 Fibronectin type III domain CJ259_RS15490 PF00704 Glycosyl hydrolases family 18 CJ259_RS15495 PF01844 HNH endonuclease CJ259_RS15500 PF07023 Protein of unknown function (DUF1315) CJ259_RS15505 PF01641 SelR domain CJ259_RS15510 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CJ259_RS15510 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CJ259_RS15515 PF01263 Aldose 1-epimerase CJ259_RS15520 PF00248 Aldo/keto reductase family CJ259_RS15525 PF06629 MltA-interacting protein MipA CJ259_RS15530 PF06798 PrkA serine protein kinase C-terminal domain CJ259_RS15530 PF08298 PrkA AAA domain CJ259_RS15535 PF04285 Protein of unknown function (DUF444) CJ259_RS15545 PF00255 Glutathione peroxidase CJ259_RS15555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS15555 PF03466 LysR substrate binding domain CJ259_RS15560 PF07690 Major Facilitator Superfamily CJ259_RS15570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS15570 PF03466 LysR substrate binding domain CJ259_RS15575 PF13438 Domain of unknown function (DUF4113) CJ259_RS15575 PF00817 impB/mucB/samB family CJ259_RS15575 PF11799 impB/mucB/samB family C-terminal domain CJ259_RS15575 PF11798 IMS family HHH motif CJ259_RS15580 PF00717 Peptidase S24-like CJ259_RS15585 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CJ259_RS15595 PF06183 DinI-like family CJ259_RS15600 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CJ259_RS15605 PF04073 Aminoacyl-tRNA editing domain CJ259_RS15610 PF04284 Protein of unknown function (DUF441) CJ259_RS15615 PF02311 AraC-like ligand binding domain CJ259_RS15615 PF12833 Helix-turn-helix domain CJ259_RS15620 PF07690 Major Facilitator Superfamily CJ259_RS15625 PF06418 CTP synthase N-terminus CJ259_RS15625 PF00117 Glutamine amidotransferase class-I CJ259_RS15630 PF04463 Protein of unknown function (DUF523) CJ259_RS15635 PF04343 Protein of unknown function, DUF488 CJ259_RS15640 PF03891 Domain of unknown function (DUF333) CJ259_RS15645 PF00990 Diguanylate cyclase, GGDEF domain CJ259_RS15645 PF13185 GAF domain CJ259_RS15665 PF10749 Protein of unknown function (DUF2534) CJ259_RS15670 PF01810 LysE type translocator CJ259_RS15675 PF03279 Bacterial lipid A biosynthesis acyltransferase CJ259_RS15685 PF00710 Asparaginase, N-terminal CJ259_RS15685 PF17763 Glutaminase/Asparaginase C-terminal domain CJ259_RS15690 PF01966 HD domain CJ259_RS15695 PF00990 Diguanylate cyclase, GGDEF domain CJ259_RS15700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS15700 PF03466 LysR substrate binding domain CJ259_RS15705 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CJ259_RS15730 PF02322 Cytochrome bd terminal oxidase subunit II CJ259_RS15735 PF01654 Cytochrome bd terminal oxidase subunit I CJ259_RS15740 PF05067 Manganese containing catalase CJ259_RS15745 PF05974 Domain of unknown function (DUF892) CJ259_RS15750 PF05974 Domain of unknown function (DUF892) CJ259_RS15755 PF10685 Stress-induced bacterial acidophilic repeat motif CJ259_RS15760 PF00107 Zinc-binding dehydrogenase CJ259_RS15760 PF08240 Alcohol dehydrogenase GroES-like domain CJ259_RS15760 PF13823 Alcohol dehydrogenase GroES-associated CJ259_RS15765 PF06906 Protein of unknown function (DUF1272) CJ259_RS15790 PF00180 Isocitrate/isopropylmalate dehydrogenase CJ259_RS15795 PF00849 RNA pseudouridylate synthase CJ259_RS15800 PF00293 NUDIX domain CJ259_RS15810 PF04356 Protein of unknown function (DUF489) CJ259_RS15815 PF00206 Lyase CJ259_RS15815 PF08328 Adenylosuccinate lyase C-terminal CJ259_RS15830 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS15830 PF00072 Response regulator receiver domain CJ259_RS15835 PF08918 PhoQ Sensor CJ259_RS15835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS15840 PF08007 Cupin superfamily protein CJ259_RS15845 PF07687 Peptidase dimerisation domain CJ259_RS15845 PF01546 Peptidase family M20/M25/M40 CJ259_RS15850 PF08402 TOBE domain CJ259_RS15850 PF00005 ABC transporter CJ259_RS15855 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS15860 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS15865 PF13416 Bacterial extracellular solute-binding protein CJ259_RS15875 PF13193 AMP-binding enzyme C-terminal domain CJ259_RS15875 PF00501 AMP-binding enzyme CJ259_RS15880 PF00456 Transketolase, thiamine diphosphate binding domain CJ259_RS15880 PF02780 Transketolase, C-terminal domain CJ259_RS15880 PF02779 Transketolase, pyrimidine binding domain CJ259_RS15885 PF00923 Transaldolase/Fructose-6-phosphate aldolase CJ259_RS15890 PF02502 Ribose/Galactose Isomerase CJ259_RS15895 PF03829 PTS system glucitol/sorbitol-specific IIA component CJ259_RS15900 PF03812 2-keto-3-deoxygluconate permease CJ259_RS15905 PF07005 Sugar-binding N-terminal domain CJ259_RS15905 PF17042 Nucleotide-binding C-terminal domain CJ259_RS15910 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CJ259_RS15915 PF00121 Triosephosphate isomerase CJ259_RS15920 PF04198 Putative sugar-binding domain CJ259_RS15930 PF02146 Sir2 family CJ259_RS15935 PF00480 ROK family CJ259_RS15940 PF02687 FtsX-like permease family CJ259_RS15940 PF12704 MacB-like periplasmic core domain CJ259_RS15945 PF00005 ABC transporter CJ259_RS15950 PF12704 MacB-like periplasmic core domain CJ259_RS15950 PF02687 FtsX-like permease family CJ259_RS15960 PF00271 Helicase conserved C-terminal domain CJ259_RS15960 PF17757 UvrB interaction domain CJ259_RS15960 PF03461 TRCF domain CJ259_RS15960 PF02559 CarD-like/TRCF domain CJ259_RS15960 PF00270 DEAD/DEAH box helicase CJ259_RS15965 PF01476 LysM domain CJ259_RS15965 PF17969 L,D-transpeptidase C-terminal domain CJ259_RS15965 PF03734 L,D-transpeptidase catalytic domain CJ259_RS15970 PF07338 Protein of unknown function (DUF1471) CJ259_RS15975 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS15980 PF07715 TonB-dependent Receptor Plug Domain CJ259_RS15980 PF00593 TonB dependent receptor CJ259_RS15985 PF05433 Glycine zipper 2TM domain CJ259_RS15990 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ259_RS15995 PF05728 Uncharacterised protein family (UPF0227) CJ259_RS16000 PF00933 Glycosyl hydrolase family 3 N terminal domain CJ259_RS16005 PF01636 Phosphotransferase enzyme family CJ259_RS16010 PF13036 Peptidoglycan-synthase activator LpoB CJ259_RS16015 PF07233 Protein of unknown function (DUF1425) CJ259_RS16020 PF01230 HIT domain CJ259_RS16025 PF02378 Phosphotransferase system, EIIC CJ259_RS16025 PF00367 phosphotransferase system, EIIB CJ259_RS16030 PF01026 TatD related DNase CJ259_RS16035 PF09115 DNA polymerase III, delta subunit, C terminal CJ259_RS16040 PF02223 Thymidylate kinase CJ259_RS16045 PF02618 YceG-like family CJ259_RS16050 PF01063 Amino-transferase class IV CJ259_RS16055 PF02801 Beta-ketoacyl synthase, C-terminal domain CJ259_RS16055 PF00109 Beta-ketoacyl synthase, N-terminal domain CJ259_RS16060 PF00550 Phosphopantetheine attachment site CJ259_RS16070 PF00698 Acyl transferase domain CJ259_RS16075 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CJ259_RS16075 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CJ259_RS16080 PF02504 Fatty acid synthesis protein CJ259_RS16085 PF01783 Ribosomal L32p protein family CJ259_RS16090 PF02620 Large ribosomal RNA subunit accumulation protein YceD CJ259_RS16095 PF02545 Maf-like protein CJ259_RS16100 PF01479 S4 domain CJ259_RS16100 PF00849 RNA pseudouridylate synthase CJ259_RS16110 PF10150 Ribonuclease E/G family CJ259_RS16110 PF12111 Polyribonucleotide phosphorylase C terminal CJ259_RS16110 PF00575 S1 RNA binding domain CJ259_RS16115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS16115 PF03466 LysR substrate binding domain CJ259_RS16120 PF07690 Major Facilitator Superfamily CJ259_RS16125 PF03023 Lipid II flippase MurJ CJ259_RS16130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJ259_RS16135 PF04337 Protein of unknown function, DUF480 CJ259_RS16140 PF13302 Acetyltransferase (GNAT) domain CJ259_RS16145 PF07690 Major Facilitator Superfamily CJ259_RS16150 PF07273 Protein of unknown function (DUF1439) CJ259_RS16155 PF01979 Amidohydrolase family CJ259_RS16160 PF06183 DinI-like family CJ259_RS16170 PF13991 BssS protein family CJ259_RS16175 PF01266 FAD dependent oxidoreductase CJ259_RS16180 PF10968 Protein of unknown function (DUF2770) CJ259_RS16185 PF00581 Rhodanese-like domain CJ259_RS16185 PF12368 Rhodanase C-terminal CJ259_RS16185 PF17773 UPF0176 acylphosphatase like domain CJ259_RS16190 PF03279 Bacterial lipid A biosynthesis acyltransferase CJ259_RS16200 PF07690 Major Facilitator Superfamily CJ259_RS16205 PF13984 MsyB protein CJ259_RS16210 PF07119 Protein of unknown function (DUF1375) CJ259_RS16215 PF00535 Glycosyl transferase family 2 CJ259_RS16220 PF04349 Periplasmic glucan biosynthesis protein, MdoG CJ259_RS16230 PF01757 Acyltransferase family CJ259_RS16235 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS16235 PF13977 BetI-type transcriptional repressor, C-terminal CJ259_RS16240 PF01661 Macro domain CJ259_RS16245 PF06496 Protein of unknown function (DUF1097) CJ259_RS16250 PF02613 Nitrate reductase delta subunit CJ259_RS16255 PF02811 PHP domain CJ259_RS16260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJ259_RS16280 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS16285 PF03466 LysR substrate binding domain CJ259_RS16285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS16290 PF05726 Pirin C-terminal cupin domain CJ259_RS16290 PF02678 Pirin CJ259_RS16295 PF00857 Isochorismatase family CJ259_RS16315 PF02562 PhoH-like protein CJ259_RS16320 PF04261 Dyp-type peroxidase family CJ259_RS16325 PF09375 Imelysin CJ259_RS16325 PF13473 Cupredoxin-like domain CJ259_RS16330 PF03239 Iron permease FTR1 family CJ259_RS16335 PF07670 Nucleoside recognition CJ259_RS16335 PF07662 Na+ dependent nucleoside transporter C-terminus CJ259_RS16335 PF01773 Na+ dependent nucleoside transporter N-terminus CJ259_RS16345 PF00474 Sodium:solute symporter family CJ259_RS16355 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CJ259_RS16355 PF01619 Proline dehydrogenase CJ259_RS16355 PF14850 DNA-binding domain of Proline dehydrogenase CJ259_RS16355 PF00171 Aldehyde dehydrogenase family CJ259_RS16365 PF08362 YcdC-like protein, C-terminal region CJ259_RS16365 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS16370 PF00296 Luciferase-like monooxygenase CJ259_RS16375 PF00857 Isochorismatase family CJ259_RS16380 PF01042 Endoribonuclease L-PSP CJ259_RS16385 PF00561 alpha/beta hydrolase fold CJ259_RS16390 PF00881 Nitroreductase family CJ259_RS16395 PF01613 Flavin reductase like domain CJ259_RS16400 PF00860 Permease family CJ259_RS16410 PF10685 Stress-induced bacterial acidophilic repeat motif CJ259_RS16415 PF03358 NADPH-dependent FMN reductase CJ259_RS16420 PF13993 YccJ-like protein CJ259_RS16425 PF00328 Histidine phosphatase superfamily (branch 2) CJ259_RS16430 PF01638 HxlR-like helix-turn-helix CJ259_RS16450 PF00324 Amino acid permease CJ259_RS16460 PF00120 Glutamine synthetase, catalytic domain CJ259_RS16465 PF07722 Peptidase C26 CJ259_RS16470 PF01381 Helix-turn-helix CJ259_RS16470 PF07883 Cupin domain CJ259_RS16475 PF00171 Aldehyde dehydrogenase family CJ259_RS16480 PF01266 FAD dependent oxidoreductase CJ259_RS16485 PF03466 LysR substrate binding domain CJ259_RS16485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS16490 PF00180 Isocitrate/isopropylmalate dehydrogenase CJ259_RS16500 PF02028 BCCT, betaine/carnitine/choline family transporter CJ259_RS16505 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CJ259_RS16505 PF00355 Rieske [2Fe-2S] domain CJ259_RS16510 PF00171 Aldehyde dehydrogenase family CJ259_RS16515 PF00111 2Fe-2S iron-sulfur cluster binding domain CJ259_RS16515 PF00175 Oxidoreductase NAD-binding domain CJ259_RS16515 PF00970 Oxidoreductase FAD-binding domain CJ259_RS16525 PF12792 CSS motif domain associated with EAL CJ259_RS16525 PF00563 EAL domain CJ259_RS16535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ259_RS16540 PF01027 Inhibitor of apoptosis-promoting Bax1 CJ259_RS16545 PF04358 DsrC like protein CJ259_RS16550 PF00708 Acylphosphatase CJ259_RS16555 PF12833 Helix-turn-helix domain CJ259_RS16560 PF01161 Phosphatidylethanolamine-binding protein CJ259_RS16565 PF17785 PUA-like domain CJ259_RS16565 PF10672 S-adenosylmethionine-dependent methyltransferase CJ259_RS16570 PF08755 Hemimethylated DNA-binding protein YccV like CJ259_RS16585 PF13533 Biotin-lipoyl like CJ259_RS16590 PF00664 ABC transporter transmembrane region CJ259_RS16590 PF00005 ABC transporter CJ259_RS16590 PF03412 Peptidase C39 family CJ259_RS16625 PF13380 CoA binding domain CJ259_RS16630 PF02142 MGS-like domain CJ259_RS16635 PF00580 UvrD/REP helicase N-terminal domain CJ259_RS16635 PF13361 UvrD-like helicase C-terminal domain CJ259_RS16635 PF12462 DNA helicase IV / RNA helicase N terminal CJ259_RS16640 PF03733 Inner membrane component domain CJ259_RS16645 PF12805 FUSC-like inner membrane protein yccS CJ259_RS16650 PF04994 TfoX C-terminal domain CJ259_RS16650 PF04993 TfoX N-terminal domain CJ259_RS16660 PF03846 Cell division inhibitor SulA CJ259_RS16665 PF00691 OmpA family CJ259_RS16665 PF01389 OmpA-like transmembrane domain CJ259_RS16670 PF06303 MatP N-terminal domain CJ259_RS16670 PF17414 MatP C-terminal ribbon-helix-helix domain CJ259_RS16675 PF05362 Lon protease (S16) C-terminal proteolytic domain CJ259_RS16675 PF13654 AAA domain CJ259_RS16680 PF07977 FabA-like domain CJ259_RS16685 PF04957 Ribosome modulation factor CJ259_RS16695 PF03886 ABC-type transport auxiliary lipoprotein component CJ259_RS16700 PF02470 MlaD protein CJ259_RS16705 PF04403 Paraquat-inducible protein A CJ259_RS16710 PF12848 ABC transporter CJ259_RS16710 PF00005 ABC transporter CJ259_RS16710 PF16326 ABC transporter C-terminal domain CJ259_RS16715 PF10672 S-adenosylmethionine-dependent methyltransferase CJ259_RS16715 PF01170 Putative RNA methylase family UPF0020 CJ259_RS16715 PF02926 THUMP domain CJ259_RS16720 PF03476 MOSC N-terminal beta barrel domain CJ259_RS16720 PF00111 2Fe-2S iron-sulfur cluster binding domain CJ259_RS16720 PF03473 MOSC domain CJ259_RS16725 PF07126 Cell-division protein ZapC CJ259_RS16730 PF01180 Dihydroorotate dehydrogenase CJ259_RS16735 PF03358 NADPH-dependent FMN reductase CJ259_RS16740 PF09084 NMT1/THI5 like CJ259_RS16745 PF00296 Luciferase-like monooxygenase CJ259_RS16750 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS16755 PF00005 ABC transporter CJ259_RS16760 PF01433 Peptidase family M1 domain CJ259_RS16760 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CJ259_RS16760 PF11940 Domain of unknown function (DUF3458) Ig-like fold CJ259_RS16770 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CJ259_RS16770 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CJ259_RS16775 PF01546 Peptidase family M20/M25/M40 CJ259_RS16775 PF07687 Peptidase dimerisation domain CJ259_RS16780 PF07687 Peptidase dimerisation domain CJ259_RS16780 PF01546 Peptidase family M20/M25/M40 CJ259_RS16790 PF00291 Pyridoxal-phosphate dependent enzyme CJ259_RS16795 PF01037 Lrp/AsnC ligand binding domain CJ259_RS16800 PF00152 tRNA synthetases class II (D, K and N) CJ259_RS16800 PF01336 OB-fold nucleic acid binding domain CJ259_RS16805 PF00267 Gram-negative porin CJ259_RS16810 PF00155 Aminotransferase class I and II CJ259_RS16815 PF00753 Metallo-beta-lactamase superfamily CJ259_RS16820 PF05951 Bacterial protein of unknown function (DUF882) CJ259_RS16830 PF03734 L,D-transpeptidase catalytic domain CJ259_RS16830 PF01471 Putative peptidoglycan binding domain CJ259_RS16835 PF16330 MukB hinge domain CJ259_RS16835 PF04310 MukB N-terminal CJ259_RS16840 PF04288 MukE-like family CJ259_RS16845 PF17192 MukF middle domain CJ259_RS16845 PF03882 MukF winged-helix domain CJ259_RS16845 PF17193 MukF C-terminal domain CJ259_RS16850 PF13847 Methyltransferase domain CJ259_RS16855 PF02698 DUF218 domain CJ259_RS16860 PF01636 Phosphotransferase enzyme family CJ259_RS16865 PF02348 Cytidylyltransferase CJ259_RS16870 PF03966 Trm112p-like protein CJ259_RS16875 PF06224 Winged helix DNA-binding domain CJ259_RS16880 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CJ259_RS16885 PF00664 ABC transporter transmembrane region CJ259_RS16885 PF00005 ABC transporter CJ259_RS16890 PF03772 Competence protein CJ259_RS16890 PF00753 Metallo-beta-lactamase superfamily CJ259_RS16895 PF00216 Bacterial DNA-binding protein CJ259_RS16900 PF00575 S1 RNA binding domain CJ259_RS16905 PF02224 Cytidylate kinase CJ259_RS16910 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJ259_RS16915 PF00266 Aminotransferase class-V CJ259_RS16920 PF04239 Protein of unknown function (DUF421) CJ259_RS16925 PF18381 YcaO cyclodehydratase C-terminal domain CJ259_RS16925 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CJ259_RS16930 PF01226 Formate/nitrite transporter CJ259_RS16935 PF01228 Glycine radical CJ259_RS16935 PF02901 Pyruvate formate lyase-like CJ259_RS16940 PF04055 Radical SAM superfamily CJ259_RS16945 PF07690 Major Facilitator Superfamily CJ259_RS16955 PF04976 DMSO reductase anchor subunit (DmsC) CJ259_RS16960 PF13247 4Fe-4S dicluster domain CJ259_RS16960 PF12800 4Fe-4S binding domain CJ259_RS16965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJ259_RS16965 PF01568 Molydopterin dinucleotide binding domain CJ259_RS16965 PF00384 Molybdopterin oxidoreductase CJ259_RS16970 PF02403 Seryl-tRNA synthetase N-terminal domain CJ259_RS16970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJ259_RS16975 PF16193 AAA C-terminal domain CJ259_RS16975 PF00004 ATPase family associated with various cellular activities (AAA) CJ259_RS16975 PF12002 MgsA AAA+ ATPase C terminal CJ259_RS16980 PF03548 Outer membrane lipoprotein carrier protein LolA CJ259_RS16985 PF01580 FtsK/SpoIIIE family CJ259_RS16985 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CJ259_RS16985 PF17854 FtsK alpha domain CJ259_RS16985 PF09397 Ftsk gamma domain CJ259_RS16990 PF01037 Lrp/AsnC ligand binding domain CJ259_RS16995 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ259_RS17000 PF00005 ABC transporter CJ259_RS17000 PF00664 ABC transporter transmembrane region CJ259_RS17005 PF00664 ABC transporter transmembrane region CJ259_RS17005 PF00005 ABC transporter CJ259_RS17010 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CJ259_RS17015 PF01176 Translation initiation factor 1A / IF-1 CJ259_RS17020 PF07724 AAA domain (Cdc48 subfamily) CJ259_RS17020 PF10431 C-terminal, D2-small domain, of ClpB protein CJ259_RS17020 PF00004 ATPase family associated with various cellular activities (AAA) CJ259_RS17020 PF02861 Clp amino terminal domain, pathogenicity island component CJ259_RS17020 PF17871 AAA lid domain CJ259_RS17025 PF02617 ATP-dependent Clp protease adaptor protein ClpS CJ259_RS17030 PF00313 'Cold-shock' DNA-binding domain CJ259_RS17040 PF02687 FtsX-like permease family CJ259_RS17040 PF00005 ABC transporter CJ259_RS17040 PF12704 MacB-like periplasmic core domain CJ259_RS17045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJ259_RS17050 PF11398 Protein of unknown function (DUF2813) CJ259_RS17055 PF00230 Major intrinsic protein CJ259_RS17060 PF03956 Lysine exporter LysO CJ259_RS17065 PF03063 Prismane/CO dehydrogenase family CJ259_RS17070 PF00111 2Fe-2S iron-sulfur cluster binding domain CJ259_RS17070 PF00970 Oxidoreductase FAD-binding domain CJ259_RS17070 PF00175 Oxidoreductase NAD-binding domain CJ259_RS17080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJ259_RS17080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJ259_RS17080 PF00205 Thiamine pyrophosphate enzyme, central domain CJ259_RS17085 PF01212 Beta-eliminating lyase CJ259_RS17090 PF11066 Protein of unknown function (DUF2867) CJ259_RS17090 PF13460 NAD(P)H-binding CJ259_RS17095 PF01370 NAD dependent epimerase/dehydratase family CJ259_RS17100 PF01510 N-acetylmuramoyl-L-alanine amidase CJ259_RS17105 PF01590 GAF domain CJ259_RS17105 PF00990 Diguanylate cyclase, GGDEF domain CJ259_RS17105 PF00360 Phytochrome region CJ259_RS17105 PF00563 EAL domain CJ259_RS17115 PF12883 Protein of unknown function (DUF3828) CJ259_RS17120 PF00005 ABC transporter CJ259_RS17125 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ259_RS17130 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS17135 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS17140 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ259_RS17145 PF16736 Single Cache-like CJ259_RS17145 PF00989 PAS fold CJ259_RS17145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS17145 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS17150 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS17150 PF00072 Response regulator receiver domain CJ259_RS17155 PF05958 tRNA (Uracil-5-)-methyltransferase CJ259_RS17160 PF10767 Protein of unknown function (DUF2593) CJ259_RS17165 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS17170 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS17175 PF08402 TOBE domain CJ259_RS17175 PF00005 ABC transporter CJ259_RS17180 PF13416 Bacterial extracellular solute-binding protein CJ259_RS17185 PF10722 Putative bacterial sensory transduction regulator CJ259_RS17190 PF18030 RimK PreATP-grasp domain CJ259_RS17190 PF08443 RimK-like ATP-grasp domain CJ259_RS17195 PF00881 Nitroreductase family CJ259_RS17200 PF07214 Protein of unknown function (DUF1418) CJ259_RS17205 PF00462 Glutaredoxin CJ259_RS17210 PF11045 Putative inner membrane protein of Enterobacteriaceae CJ259_RS17215 PF06826 Predicted Permease Membrane Region CJ259_RS17215 PF02080 TrkA-C domain CJ259_RS17220 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS17225 PF07690 Major Facilitator Superfamily CJ259_RS17235 PF07690 Major Facilitator Superfamily CJ259_RS17245 PF01569 PAP2 superfamily CJ259_RS17250 PF00455 DeoR C terminal sensor domain CJ259_RS17250 PF08220 DeoR-like helix-turn-helix domain CJ259_RS17255 PF00768 D-alanyl-D-alanine carboxypeptidase CJ259_RS17255 PF07943 Penicillin-binding protein 5, C-terminal domain CJ259_RS17260 PF00043 Glutathione S-transferase, C-terminal domain CJ259_RS17260 PF13417 Glutathione S-transferase, N-terminal domain CJ259_RS17265 PF07995 Glucose / Sorbosone dehydrogenase CJ259_RS17270 PF10799 Biofilm formation protein (YliH/bssR) CJ259_RS17275 PF01306 LacY proton/sugar symporter CJ259_RS17280 PF18693 TRAM domain CJ259_RS17280 PF00919 Uncharacterized protein family UPF0004 CJ259_RS17280 PF04055 Radical SAM superfamily CJ259_RS17290 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS17290 PF12911 N-terminal TM domain of oligopeptide transport permease C CJ259_RS17295 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS17300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ259_RS17305 PF00005 ABC transporter CJ259_RS17305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ259_RS17310 PF01112 Asparaginase CJ259_RS17315 PF03453 MoeA N-terminal region (domain I and II) CJ259_RS17315 PF03454 MoeA C-terminal region (domain IV) CJ259_RS17315 PF00994 Probable molybdopterin binding domain CJ259_RS17320 PF00899 ThiF family CJ259_RS17325 PF04055 Radical SAM superfamily CJ259_RS17330 PF01228 Glycine radical CJ259_RS17330 PF02901 Pyruvate formate lyase-like CJ259_RS17340 PF07350 Protein of unknown function (DUF1479) CJ259_RS17345 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS17350 PF07690 Major Facilitator Superfamily CJ259_RS17355 PF17137 Domain of unknown function (DUF5110) CJ259_RS17355 PF13802 Galactose mutarotase-like CJ259_RS17355 PF16338 Domain of unknown function (DUF4968) CJ259_RS17355 PF01055 Glycosyl hydrolases family 31 CJ259_RS17360 PF00005 ABC transporter CJ259_RS17360 PF12848 ABC transporter CJ259_RS17365 PF13350 Tyrosine phosphatase family CJ259_RS17370 PF17969 L,D-transpeptidase C-terminal domain CJ259_RS17370 PF03734 L,D-transpeptidase catalytic domain CJ259_RS17375 PF07702 UTRA domain CJ259_RS17375 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS17380 PF00232 Glycosyl hydrolase family 1 CJ259_RS17385 PF03600 Citrate transporter CJ259_RS17390 PF02742 Iron dependent repressor, metal binding and dimerisation domain CJ259_RS17390 PF01325 Iron dependent repressor, N-terminal DNA binding domain CJ259_RS17400 PF00884 Sulfatase CJ259_RS17405 PF13505 Outer membrane protein beta-barrel domain CJ259_RS17410 PF00892 EamA-like transporter family CJ259_RS17415 PF00210 Ferritin-like domain CJ259_RS17420 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ259_RS17425 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS17430 PF00005 ABC transporter CJ259_RS17435 PF00924 Mechanosensitive ion channel CJ259_RS17440 PF05971 RNA methyltransferase CJ259_RS17445 PF01613 Flavin reductase like domain CJ259_RS17455 PF01258 Prokaryotic dksA/traR C4-type zinc finger CJ259_RS17460 PF07338 Protein of unknown function (DUF1471) CJ259_RS17465 PF02885 Glycosyl transferase family, helical bundle domain CJ259_RS17470 PF13307 Helicase C-terminal domain CJ259_RS17470 PF06733 DEAD_2 CJ259_RS17470 PF00270 DEAD/DEAH box helicase CJ259_RS17475 PF00270 DEAD/DEAH box helicase CJ259_RS17475 PF00271 Helicase conserved C-terminal domain CJ259_RS17480 PF02779 Transketolase, pyrimidine binding domain CJ259_RS17480 PF02780 Transketolase, C-terminal domain CJ259_RS17485 PF00456 Transketolase, thiamine diphosphate binding domain CJ259_RS17495 PF07690 Major Facilitator Superfamily CJ259_RS17500 PF03466 LysR substrate binding domain CJ259_RS17500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS17505 PF09209 Tetracyclin repressor-like, C-terminal domain CJ259_RS17505 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS17510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJ259_RS17515 PF00005 ABC transporter CJ259_RS17535 PF11076 Putative inner membrane protein YbhQ CJ259_RS17540 PF03372 Endonuclease/Exonuclease/phosphatase family CJ259_RS17545 PF13091 PLD-like domain CJ259_RS17550 PF03706 Lysylphosphatidylglycerol synthase TM region CJ259_RS17555 PF01027 Inhibitor of apoptosis-promoting Bax1 CJ259_RS17560 PF02391 MoaE protein CJ259_RS17565 PF02597 ThiS family CJ259_RS17570 PF01967 MoaC family CJ259_RS17575 PF00994 Probable molybdopterin binding domain CJ259_RS17580 PF04055 Radical SAM superfamily CJ259_RS17580 PF06463 Molybdenum Cofactor Synthesis C CJ259_RS17590 PF01933 Uncharacterised protein family UPF0052 CJ259_RS17595 PF00884 Sulfatase CJ259_RS17595 PF08019 Phosphoethanolamine transferase EptA/EptB CJ259_RS17600 PF00072 Response regulator receiver domain CJ259_RS17600 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS17605 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS17605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS17615 PF12344 Ultra-violet resistance protein B CJ259_RS17615 PF17757 UvrB interaction domain CJ259_RS17615 PF04851 Type III restriction enzyme, res subunit CJ259_RS17615 PF00271 Helicase conserved C-terminal domain CJ259_RS17615 PF02151 UvrB/uvrC motif CJ259_RS17630 PF00005 ABC transporter CJ259_RS17640 PF08241 Methyltransferase domain CJ259_RS17645 PF00155 Aminotransferase class I and II CJ259_RS17650 PF06968 Biotin and Thiamin Synthesis associated domain CJ259_RS17650 PF04055 Radical SAM superfamily CJ259_RS17660 PF00202 Aminotransferase class-III CJ259_RS17665 PF01161 Phosphatidylethanolamine-binding protein CJ259_RS17675 PF00324 Amino acid permease CJ259_RS17680 PF00221 Aromatic amino acid lyase CJ259_RS17685 PF17391 Urocanase N-terminal domain CJ259_RS17685 PF17392 Urocanase C-terminal domain CJ259_RS17685 PF01175 Urocanase Rossmann-like domain CJ259_RS17690 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS17690 PF07702 UTRA domain CJ259_RS17695 PF00491 Arginase family CJ259_RS17700 PF01979 Amidohydrolase family CJ259_RS17705 PF01095 Pectinesterase CJ259_RS17715 PF00690 Cation transporter/ATPase, N-terminus CJ259_RS17715 PF00689 Cation transporting ATPase, C-terminus CJ259_RS17720 PF00582 Universal stress protein family CJ259_RS17725 PF13533 Biotin-lipoyl like CJ259_RS17730 PF00873 AcrB/AcrD/AcrF family CJ259_RS17755 PF13411 MerR HTH family regulatory protein CJ259_RS17760 PF04940 Sensors of blue-light using FAD CJ259_RS17760 PF00563 EAL domain CJ259_RS17765 PF10798 Biofilm development protein YmgB/AriR CJ259_RS17775 PF10798 Biofilm development protein YmgB/AriR CJ259_RS17780 PF10282 Lactonase, 7-bladed beta-propeller CJ259_RS17790 PF00005 ABC transporter CJ259_RS17790 PF03459 TOBE domain CJ259_RS17795 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS17805 PF10766 Multidrug efflux pump-associated protein AcrZ CJ259_RS17810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS17810 PF03459 TOBE domain CJ259_RS17815 PF00005 ABC transporter CJ259_RS17820 PF16363 GDP-mannose 4,6 dehydratase CJ259_RS17825 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CJ259_RS17825 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CJ259_RS17830 PF10509 Galactokinase galactose-binding signature CJ259_RS17830 PF08544 GHMP kinases C terminal CJ259_RS17830 PF00288 GHMP kinases N terminal domain CJ259_RS17835 PF01263 Aldose 1-epimerase CJ259_RS17840 PF00300 Histidine phosphatase superfamily (branch 1) CJ259_RS17845 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CJ259_RS17850 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CJ259_RS17855 PF00364 Biotin-requiring enzyme CJ259_RS17855 PF02436 Conserved carboxylase domain CJ259_RS17855 PF00682 HMGL-like CJ259_RS17860 PF04277 Oxaloacetate decarboxylase, gamma chain CJ259_RS17865 PF02080 TrkA-C domain CJ259_RS17865 PF03600 Citrate transporter CJ259_RS17870 PF03466 LysR substrate binding domain CJ259_RS17870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS17875 PF03466 LysR substrate binding domain CJ259_RS17875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS17880 PF05681 Fumarate hydratase (Fumerase) CJ259_RS17885 PF05683 Fumarase C-terminus CJ259_RS17885 PF05681 Fumarate hydratase (Fumerase) CJ259_RS17890 PF00793 DAHP synthetase I family CJ259_RS17895 PF13985 YbgS-like protein CJ259_RS17900 PF01545 Cation efflux family CJ259_RS17905 PF04973 Nicotinamide mononucleotide transporter CJ259_RS17910 PF02445 Quinolinate synthetase A protein CJ259_RS17955 PF13174 Tetratricopeptide repeat CJ259_RS17955 PF16331 TolA binding protein trimerisation CJ259_RS17960 PF00691 OmpA family CJ259_RS17965 PF04052 TolB amino-terminal domain CJ259_RS17965 PF07676 WD40-like Beta Propeller Repeat CJ259_RS17970 PF06519 TolA C-terminal CJ259_RS17970 PF06519 TolA C-terminal CJ259_RS17975 PF02472 Biopolymer transport protein ExbD/TolR CJ259_RS17980 PF01618 MotA/TolQ/ExbB proton channel family CJ259_RS17985 PF03061 Thioesterase superfamily CJ259_RS17990 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CJ259_RS17995 PF08173 Membrane bound YbgT-like protein CJ259_RS18000 PF02322 Cytochrome bd terminal oxidase subunit II CJ259_RS18005 PF01654 Cytochrome bd terminal oxidase subunit I CJ259_RS18015 PF02629 CoA binding domain CJ259_RS18015 PF00549 CoA-ligase CJ259_RS18020 PF00549 CoA-ligase CJ259_RS18020 PF08442 ATP-grasp domain CJ259_RS18025 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJ259_RS18025 PF00364 Biotin-requiring enzyme CJ259_RS18025 PF02817 e3 binding domain CJ259_RS18030 PF02779 Transketolase, pyrimidine binding domain CJ259_RS18030 PF16870 2-oxoglutarate dehydrogenase C-terminal CJ259_RS18030 PF16078 2-oxoglutarate dehydrogenase N-terminus CJ259_RS18030 PF00676 Dehydrogenase E1 component CJ259_RS18035 PF13085 2Fe-2S iron-sulfur cluster binding domain CJ259_RS18040 PF00890 FAD binding domain CJ259_RS18040 PF02910 Fumarate reductase flavoprotein C-term CJ259_RS18045 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CJ259_RS18050 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CJ259_RS18055 PF00285 Citrate synthase, C-terminal domain CJ259_RS18060 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CJ259_RS18060 PF06827 Zinc finger found in FPG and IleRS CJ259_RS18060 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CJ259_RS18065 PF01470 Pyroglutamyl peptidase CJ259_RS18080 PF03746 LamB/YcsF family CJ259_RS18085 PF02626 Carboxyltransferase domain, subdomain A and B CJ259_RS18090 PF02682 Carboxyltransferase domain, subdomain C and D CJ259_RS18095 PF01784 NIF3 (NGG1p interacting factor 3) CJ259_RS18100 PF00854 POT family CJ259_RS18105 PF00875 DNA photolyase CJ259_RS18105 PF03441 FAD binding domain of DNA photolyase CJ259_RS18110 PF10725 Protein of unknown function (DUF2517) CJ259_RS18115 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) CJ259_RS18120 PF03814 Potassium-transporting ATPase A subunit CJ259_RS18130 PF02669 K+-transporting ATPase, c chain CJ259_RS18135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS18135 PF13492 GAF domain CJ259_RS18135 PF13493 Domain of unknown function (DUF4118) CJ259_RS18135 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS18135 PF02702 Osmosensitive K+ channel His kinase sensor domain CJ259_RS18140 PF00072 Response regulator receiver domain CJ259_RS18140 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS18150 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJ259_RS18150 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJ259_RS18150 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJ259_RS18150 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJ259_RS18155 PF03925 SeqA protein C-terminal domain CJ259_RS18155 PF17206 SeqA protein N-terminal domain CJ259_RS18160 PF12697 Alpha/beta hydrolase family CJ259_RS18165 PF01402 Ribbon-helix-helix protein, copG family CJ259_RS18170 PF00258 Flavodoxin CJ259_RS18175 PF01475 Ferric uptake regulator family CJ259_RS18180 PF07690 Major Facilitator Superfamily CJ259_RS18185 PF13982 YbfN-like lipoprotein CJ259_RS18190 PF03573 outer membrane porin, OprD family CJ259_RS18200 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CJ259_RS18200 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJ259_RS18205 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CJ259_RS18205 PF00367 phosphotransferase system, EIIB CJ259_RS18205 PF02378 Phosphotransferase system, EIIC CJ259_RS18210 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CJ259_RS18215 PF01979 Amidohydrolase family CJ259_RS18220 PF01047 MarR family CJ259_RS18220 PF00480 ROK family CJ259_RS18225 PF13344 Haloacid dehalogenase-like hydrolase CJ259_RS18230 PF00733 Asparagine synthase CJ259_RS18230 PF13537 Glutamine amidotransferase domain CJ259_RS18275 PF01494 FAD binding domain CJ259_RS18280 PF04055 Radical SAM superfamily CJ259_RS18280 PF01938 TRAM domain CJ259_RS18280 PF00919 Uncharacterized protein family UPF0004 CJ259_RS18285 PF02562 PhoH-like protein CJ259_RS18290 PF02130 Uncharacterized protein family UPF0054 CJ259_RS18295 PF03471 Transporter associated domain CJ259_RS18295 PF00571 CBS domain CJ259_RS18300 PF00795 Carbon-nitrogen hydrolase CJ259_RS18305 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ259_RS18310 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS18315 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS18320 PF00005 ABC transporter CJ259_RS18325 PF08479 POTRA domain, ShlB-type CJ259_RS18325 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CJ259_RS18325 PF17287 POTRA domain CJ259_RS18330 PF05860 haemagglutination activity domain CJ259_RS18330 PF05594 Haemagluttinin repeat CJ259_RS18330 PF14436 Bacterial EndoU nuclease CJ259_RS18330 PF13332 Hemagglutinin repeat CJ259_RS18330 PF04829 Pre-toxin domain with VENN motif CJ259_RS18335 PF07295 Zinc-ribbon containing domain CJ259_RS18340 PF08264 Anticodon-binding domain of tRNA CJ259_RS18340 PF13603 Leucyl-tRNA synthetase, Domain 2 CJ259_RS18340 PF00133 tRNA synthetases class I (I, L, M and V) CJ259_RS18345 PF04390 Lipopolysaccharide-assembly CJ259_RS18350 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CJ259_RS18350 PF06144 DNA polymerase III, delta subunit CJ259_RS18355 PF01467 Cytidylyltransferase-like CJ259_RS18360 PF00300 Histidine phosphatase superfamily (branch 1) CJ259_RS18375 PF02590 Predicted SPOUT methyltransferase CJ259_RS18380 PF03717 Penicillin-binding Protein dimerisation domain CJ259_RS18380 PF00905 Penicillin binding protein transpeptidase domain CJ259_RS18385 PF01098 Cell cycle protein CJ259_RS18390 PF05036 Sporulation related domain CJ259_RS18390 PF03330 Lytic transglycolase CJ259_RS18395 PF07943 Penicillin-binding protein 5, C-terminal domain CJ259_RS18395 PF00768 D-alanyl-D-alanine carboxypeptidase CJ259_RS18400 PF04359 Protein of unknown function (DUF493) CJ259_RS18405 PF03099 Biotin/lipoate A/B protein ligase family CJ259_RS18410 PF03466 LysR substrate binding domain CJ259_RS18410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS18415 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CJ259_RS18415 PF04055 Radical SAM superfamily CJ259_RS18420 PF02416 mttA/Hcf106 family CJ259_RS18425 PF00795 Carbon-nitrogen hydrolase CJ259_RS18430 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CJ259_RS18435 PF00313 'Cold-shock' DNA-binding domain CJ259_RS18440 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CJ259_RS18445 PF03606 C4-dicarboxylate anaerobic carrier CJ259_RS18450 PF00445 Ribonuclease T2 family CJ259_RS18455 PF14760 Rnk N-terminus CJ259_RS18455 PF01272 Transcription elongation factor, GreA/GreB, C-term CJ259_RS18460 PF00582 Universal stress protein family CJ259_RS18465 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ259_RS18465 PF13192 Thioredoxin domain CJ259_RS18470 PF10417 C-terminal domain of 1-Cys peroxiredoxin CJ259_RS18470 PF00578 AhpC/TSA family CJ259_RS18475 PF13098 Thioredoxin-like domain CJ259_RS18480 PF03466 LysR substrate binding domain CJ259_RS18480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS18485 PF01507 Phosphoadenosine phosphosulfate reductase family CJ259_RS18485 PF11922 Domain of unknown function (DUF3440) CJ259_RS18490 PF02195 ParB-like nuclease domain CJ259_RS18495 PF00155 Aminotransferase class I and II CJ259_RS18505 PF03079 ARD/ARD' family CJ259_RS18510 PF01568 Molydopterin dinucleotide binding domain CJ259_RS18510 PF00384 Molybdopterin oxidoreductase CJ259_RS18520 PF00005 ABC transporter CJ259_RS18525 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS18530 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS18540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJ259_RS18540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJ259_RS18545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJ259_RS18545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJ259_RS18550 PF00596 Class II Aldolase and Adducin N-terminal domain CJ259_RS18555 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CJ259_RS18565 PF07969 Amidohydrolase family CJ259_RS18570 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS18575 PF00459 Inositol monophosphatase family CJ259_RS18580 PF07690 Major Facilitator Superfamily CJ259_RS18585 PF00328 Histidine phosphatase superfamily (branch 2) CJ259_RS18590 PF01008 Initiation factor 2 subunit family CJ259_RS18595 PF01636 Phosphotransferase enzyme family CJ259_RS18615 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS18620 PF00005 ABC transporter CJ259_RS18625 PF00465 Iron-containing alcohol dehydrogenase CJ259_RS18645 PF04328 Selenoprotein, putative CJ259_RS18650 PF13722 5TM C-terminal transporter carbon starvation CstA CJ259_RS18650 PF02554 Carbon starvation protein CstA CJ259_RS18655 PF03061 Thioesterase superfamily CJ259_RS18665 PF00857 Isochorismatase family CJ259_RS18665 PF00550 Phosphopantetheine attachment site CJ259_RS18670 PF13193 AMP-binding enzyme C-terminal domain CJ259_RS18670 PF00501 AMP-binding enzyme CJ259_RS18675 PF00425 chorismate binding enzyme CJ259_RS18680 PF01497 Periplasmic binding protein CJ259_RS18685 PF05977 Transmembrane secretion effector CJ259_RS18690 PF01032 FecCD transport family CJ259_RS18695 PF01032 FecCD transport family CJ259_RS18700 PF00005 ABC transporter CJ259_RS18705 PF00668 Condensation domain CJ259_RS18705 PF00550 Phosphopantetheine attachment site CJ259_RS18705 PF00975 Thioesterase domain CJ259_RS18705 PF00501 AMP-binding enzyme CJ259_RS18705 PF13193 AMP-binding enzyme C-terminal domain CJ259_RS18710 PF03621 MbtH-like protein CJ259_RS18715 PF00756 Putative esterase CJ259_RS18715 PF11806 Domain of unknown function (DUF3327) CJ259_RS18720 PF07715 TonB-dependent Receptor Plug Domain CJ259_RS18720 PF00593 TonB dependent receptor CJ259_RS18725 PF01648 4'-phosphopantetheinyl transferase superfamily CJ259_RS18725 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CJ259_RS18730 PF02779 Transketolase, pyrimidine binding domain CJ259_RS18730 PF02780 Transketolase, C-terminal domain CJ259_RS18735 PF00456 Transketolase, thiamine diphosphate binding domain CJ259_RS18745 PF04198 Putative sugar-binding domain CJ259_RS18745 PF00325 Bacterial regulatory proteins, crp family CJ259_RS18750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJ259_RS18750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJ259_RS18755 PF13407 Periplasmic binding protein domain CJ259_RS18765 PF00005 ABC transporter CJ259_RS18770 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS18790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS18790 PF03466 LysR substrate binding domain CJ259_RS18795 PF00924 Mechanosensitive ion channel CJ259_RS18805 PF02028 BCCT, betaine/carnitine/choline family transporter CJ259_RS18810 PF13977 BetI-type transcriptional repressor, C-terminal CJ259_RS18810 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS18815 PF00171 Aldehyde dehydrogenase family CJ259_RS18820 PF05199 GMC oxidoreductase CJ259_RS18820 PF00732 GMC oxidoreductase CJ259_RS18830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ259_RS18835 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS18840 PF12911 N-terminal TM domain of oligopeptide transport permease C CJ259_RS18840 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS18845 PF00005 ABC transporter CJ259_RS18845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ259_RS18850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJ259_RS18850 PF00005 ABC transporter CJ259_RS18860 PF00202 Aminotransferase class-III CJ259_RS18865 PF00106 short chain dehydrogenase CJ259_RS18870 PF00005 ABC transporter CJ259_RS18875 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS18880 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS18885 PF01464 Transglycosylase SLT domain CJ259_RS18885 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ259_RS18890 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS18890 PF00155 Aminotransferase class I and II CJ259_RS18895 PF00155 Aminotransferase class I and II CJ259_RS18900 PF00892 EamA-like transporter family CJ259_RS18905 PF04107 Glutamate-cysteine ligase family 2(GCS2) CJ259_RS18910 PF09992 Phosphodiester glycosidase CJ259_RS18915 PF00873 AcrB/AcrD/AcrF family CJ259_RS18920 PF13533 Biotin-lipoyl like CJ259_RS18925 PF00689 Cation transporting ATPase, C-terminus CJ259_RS18925 PF00690 Cation transporter/ATPase, N-terminus CJ259_RS18935 PF06643 Protein of unknown function (DUF1158) CJ259_RS18940 PF12833 Helix-turn-helix domain CJ259_RS18945 PF12706 Beta-lactamase superfamily domain CJ259_RS18950 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS18955 PF04237 YjbR CJ259_RS18960 PF00881 Nitroreductase family CJ259_RS18970 PF03830 PTS system sorbose subfamily IIB component CJ259_RS18980 PF03613 PTS system mannose/fructose/sorbose family IID component CJ259_RS18985 PF01380 SIS domain CJ259_RS18990 PF01380 SIS domain CJ259_RS18995 PF00874 PRD domain CJ259_RS18995 PF00158 Sigma-54 interaction domain CJ259_RS18995 PF03610 PTS system fructose IIA component CJ259_RS19015 PF07690 Major Facilitator Superfamily CJ259_RS19020 PF00924 Mechanosensitive ion channel CJ259_RS19025 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS19035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJ259_RS19035 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJ259_RS19045 PF03825 Nucleoside H+ symporter CJ259_RS19050 PF00324 Amino acid permease CJ259_RS19055 PF07715 TonB-dependent Receptor Plug Domain CJ259_RS19055 PF00593 TonB dependent receptor CJ259_RS19065 PF00171 Aldehyde dehydrogenase family CJ259_RS19070 PF01266 FAD dependent oxidoreductase CJ259_RS19080 PF13520 Amino acid permease CJ259_RS19095 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system CJ259_RS19100 PF00850 Histone deacetylase domain CJ259_RS19110 PF00196 Bacterial regulatory proteins, luxR family CJ259_RS19115 PF04055 Radical SAM superfamily CJ259_RS19120 PF00884 Sulfatase CJ259_RS19130 PF10703 MoaF N-terminal domain CJ259_RS19130 PF17409 MoaF C-terminal domain CJ259_RS19145 PF00248 Aldo/keto reductase family CJ259_RS19150 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ259_RS19155 PF07687 Peptidase dimerisation domain CJ259_RS19155 PF01546 Peptidase family M20/M25/M40 CJ259_RS19180 PF01032 FecCD transport family CJ259_RS19185 PF00005 ABC transporter CJ259_RS19190 PF00529 HlyD membrane-fusion protein of T1SS CJ259_RS19190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJ259_RS19195 PF11742 Protein of unknown function (DUF3302) CJ259_RS19205 PF00294 pfkB family carbohydrate kinase CJ259_RS19210 PF11471 Maltoporin periplasmic N-terminal extension CJ259_RS19210 PF02264 LamB porin CJ259_RS19215 PF00367 phosphotransferase system, EIIB CJ259_RS19215 PF02378 Phosphotransferase system, EIIC CJ259_RS19220 PF08244 Glycosyl hydrolases family 32 C terminal CJ259_RS19220 PF00251 Glycosyl hydrolases family 32 N-terminal domain CJ259_RS19225 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS19225 PF13407 Periplasmic binding protein domain CJ259_RS19235 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS19240 PF00005 ABC transporter CJ259_RS19245 PF13407 Periplasmic binding protein domain CJ259_RS19250 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS19255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJ259_RS19255 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJ259_RS19260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJ259_RS19260 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJ259_RS19265 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJ259_RS19265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJ259_RS19270 PF01261 Xylose isomerase-like TIM barrel CJ259_RS19280 PF01336 OB-fold nucleic acid binding domain CJ259_RS19280 PF00152 tRNA synthetases class II (D, K and N) CJ259_RS19285 PF00854 POT family CJ259_RS19290 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CJ259_RS19290 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CJ259_RS19290 PF01276 Orn/Lys/Arg decarboxylase, major domain CJ259_RS19295 PF13520 Amino acid permease CJ259_RS19300 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS19300 PF18500 CadC C-terminal domain 1 CJ259_RS19310 PF03279 Bacterial lipid A biosynthesis acyltransferase CJ259_RS19325 PF13954 PapC N-terminal domain CJ259_RS19325 PF13953 PapC C-terminal domain CJ259_RS19325 PF00577 Outer membrane usher protein CJ259_RS19330 PF02753 Pili assembly chaperone PapD, C-terminal domain CJ259_RS19330 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJ259_RS19335 PF16970 Type-1 fimbrial protein, A CJ259_RS19350 PF00285 Citrate synthase, C-terminal domain CJ259_RS19360 PF00576 HIUase/Transthyretin family CJ259_RS19520 PF06381 Protein of unknown function (DUF1073) CJ259_RS19525 PF04466 Phage terminase large subunit CJ259_RS19525 PF17288 Terminase RNAseH like domain CJ259_RS19545 PF03245 Bacteriophage Rz lysis protein CJ259_RS19550 PF00959 Phage lysozyme CJ259_RS19570 PF05869 DNA N-6-adenine-methyltransferase (Dam) CJ259_RS19640 PF00717 Peptidase S24-like CJ259_RS19640 PF01381 Helix-turn-helix CJ259_RS19695 PF00589 Phage integrase family CJ259_RS19710 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CJ259_RS19710 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CJ259_RS19720 PF01406 tRNA synthetases class I (C) catalytic domain CJ259_RS19720 PF09190 DALR domain CJ259_RS19725 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CJ259_RS19730 PF00149 Calcineurin-like phosphoesterase CJ259_RS19740 PF00731 AIR carboxylase CJ259_RS19745 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CJ259_RS19745 PF02222 ATP-grasp domain CJ259_RS19755 PF00267 Gram-negative porin CJ259_RS19765 PF00005 ABC transporter CJ259_RS19770 PF13472 GDSL-like Lipase/Acylhydrolase family CJ259_RS19775 PF00106 short chain dehydrogenase CJ259_RS19780 PF00085 Thioredoxin CJ259_RS19790 PF03649 Uncharacterised protein family (UPF0014) CJ259_RS19795 PF00005 ABC transporter CJ259_RS19800 PF16200 C-terminal region of band_7 CJ259_RS19800 PF01145 SPFH domain / Band 7 family CJ259_RS19805 PF01957 NfeD-like C-terminal, partner-binding CJ259_RS19810 PF13411 MerR HTH family regulatory protein CJ259_RS19815 PF00403 Heavy-metal-associated domain CJ259_RS19820 PF01963 TraB family CJ259_RS19825 PF04073 Aminoacyl-tRNA editing domain CJ259_RS19830 PF02872 5'-nucleotidase, C-terminal domain CJ259_RS19830 PF00149 Calcineurin-like phosphoesterase CJ259_RS19835 PF07690 Major Facilitator Superfamily CJ259_RS19840 PF02254 TrkA-N domain CJ259_RS19840 PF00999 Sodium/hydrogen exchanger family CJ259_RS19845 PF00294 pfkB family carbohydrate kinase CJ259_RS19850 PF00762 Ferrochelatase CJ259_RS19855 PF05191 Adenylate kinase, active site lid CJ259_RS19860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS19860 PF00183 Hsp90 protein CJ259_RS19865 PF13662 Toprim domain CJ259_RS19865 PF02132 RecR protein CJ259_RS19870 PF02575 YbaB/EbfC DNA-binding family CJ259_RS19875 PF12169 DNA polymerase III subunits gamma and tau domain III CJ259_RS19875 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CJ259_RS19875 PF12170 DNA polymerase III tau subunit V interacting with alpha CJ259_RS19880 PF00156 Phosphoribosyl transferase domain CJ259_RS19885 PF04304 Protein of unknown function (DUF454) CJ259_RS19890 PF07445 Primosomal replication protein priC CJ259_RS19895 PF10689 Protein of unknown function (DUF2496) CJ259_RS19900 PF04754 Putative transposase, YhgA-like CJ259_RS19905 PF00924 Mechanosensitive ion channel CJ259_RS19905 PF12794 Mechanosensitive ion channel inner membrane domain 1 CJ259_RS19905 PF12795 Mechanosensitive ion channel porin domain CJ259_RS19910 PF08361 MAATS-type transcriptional repressor, C-terminal region CJ259_RS19910 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS19915 PF00529 HlyD membrane-fusion protein of T1SS CJ259_RS19915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJ259_RS19920 PF00873 AcrB/AcrD/AcrF family CJ259_RS19925 PF10757 Biofilm formation regulator YbaJ CJ259_RS19930 PF05321 Haemolysin expression modulating protein CJ259_RS19935 PF14602 Hexapeptide repeat of succinyl-transferase CJ259_RS19935 PF12464 Maltose acetyltransferase CJ259_RS19940 PF10777 Inner membrane protein YlaC CJ259_RS19945 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS19945 PF00155 Aminotransferase class I and II CJ259_RS19955 PF00444 Ribosomal protein L36 CJ259_RS19960 PF01197 Ribosomal protein L31 CJ259_RS19965 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS19970 PF02264 LamB porin CJ259_RS19975 PF02378 Phosphotransferase system, EIIC CJ259_RS19975 PF00367 phosphotransferase system, EIIB CJ259_RS19980 PF08532 Beta-galactosidase trimerisation domain CJ259_RS19980 PF08533 Beta-galactosidase C-terminal domain CJ259_RS19980 PF02449 Beta-galactosidase CJ259_RS19985 PF07745 Glycosyl hydrolase family 53 CJ259_RS19990 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS19995 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS20000 PF13416 Bacterial extracellular solute-binding protein CJ259_RS20005 PF17912 MalK OB fold domain CJ259_RS20005 PF00005 ABC transporter CJ259_RS20010 PF00563 EAL domain CJ259_RS20010 PF12792 CSS motif domain associated with EAL CJ259_RS20015 PF02583 Metal-sensitive transcriptional repressor CJ259_RS20020 PF03824 High-affinity nickel-transport protein CJ259_RS20055 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJ259_RS20060 PF09619 Type III secretion system lipoprotein chaperone (YscW) CJ259_RS20070 PF00909 Ammonium Transporter Family CJ259_RS20075 PF00543 Nitrogen regulatory protein P-II CJ259_RS20080 PF00005 ABC transporter CJ259_RS20080 PF00664 ABC transporter transmembrane region CJ259_RS20085 PF00664 ABC transporter transmembrane region CJ259_RS20085 PF00005 ABC transporter CJ259_RS20090 PF13404 AsnC-type helix-turn-helix domain CJ259_RS20090 PF01037 Lrp/AsnC ligand binding domain CJ259_RS20095 PF00291 Pyridoxal-phosphate dependent enzyme CJ259_RS20105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ259_RS20105 PF12793 Sugar transport-related sRNA regulator N-term CJ259_RS20110 PF06508 Queuosine biosynthesis protein QueC CJ259_RS20125 PF13145 PPIC-type PPIASE domain CJ259_RS20130 PF00216 Bacterial DNA-binding protein CJ259_RS20135 PF02190 ATP-dependent protease La (LON) substrate-binding domain CJ259_RS20135 PF00004 ATPase family associated with various cellular activities (AAA) CJ259_RS20135 PF05362 Lon protease (S16) C-terminal proteolytic domain CJ259_RS20140 PF07724 AAA domain (Cdc48 subfamily) CJ259_RS20140 PF10431 C-terminal, D2-small domain, of ClpB protein CJ259_RS20140 PF06689 ClpX C4-type zinc finger CJ259_RS20145 PF00574 Clp protease CJ259_RS20150 PF05697 Bacterial trigger factor protein (TF) CJ259_RS20150 PF05698 Bacterial trigger factor protein (TF) C-terminus CJ259_RS20150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJ259_RS20165 PF01722 BolA-like protein CJ259_RS20170 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CJ259_RS20170 PF03923 Uncharacterized lipoprotein CJ259_RS20175 PF07690 Major Facilitator Superfamily CJ259_RS20180 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CJ259_RS20180 PF06481 COX Aromatic Rich Motif CJ259_RS20185 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJ259_RS20190 PF00510 Cytochrome c oxidase subunit III CJ259_RS20195 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CJ259_RS20200 PF01040 UbiA prenyltransferase family CJ259_RS20210 PF01614 Bacterial transcriptional regulator CJ259_RS20210 PF09339 IclR helix-turn-helix domain CJ259_RS20215 PF08501 Shikimate dehydrogenase substrate binding domain CJ259_RS20215 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CJ259_RS20215 PF01488 Shikimate / quinate 5-dehydrogenase CJ259_RS20220 PF00890 FAD binding domain CJ259_RS20230 PF00890 FAD binding domain CJ259_RS20240 PF07690 Major Facilitator Superfamily CJ259_RS20245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJ259_RS20245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJ259_RS20250 PF07690 Major Facilitator Superfamily CJ259_RS20255 PF04461 Protein of unknown function (DUF520) CJ259_RS20260 PF02558 Ketopantoate reductase PanE/ApbA CJ259_RS20260 PF08546 Ketopantoate reductase PanE/ApbA C terminal CJ259_RS20265 PF01965 DJ-1/PfpI family CJ259_RS20275 PF02926 THUMP domain CJ259_RS20275 PF02568 Thiamine biosynthesis protein (ThiI) CJ259_RS20280 PF02609 Exonuclease VII small subunit CJ259_RS20285 PF00348 Polyprenyl synthetase CJ259_RS20290 PF02780 Transketolase, C-terminal domain CJ259_RS20290 PF02779 Transketolase, pyrimidine binding domain CJ259_RS20290 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CJ259_RS20295 PF00248 Aldo/keto reductase family CJ259_RS20300 PF04608 Phosphatidylglycerophosphatase A CJ259_RS20305 PF02769 AIR synthase related protein, C-terminal domain CJ259_RS20305 PF00586 AIR synthase related protein, N-terminal domain CJ259_RS20310 PF01029 NusB family CJ259_RS20315 PF00885 6,7-dimethyl-8-ribityllumazine synthase CJ259_RS20320 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CJ259_RS20320 PF01872 RibD C-terminal domain CJ259_RS20325 PF03477 ATP cone domain CJ259_RS20330 PF11622 Protein of unknown function (DUF3251) CJ259_RS20335 PF03502 Nucleoside-specific channel-forming protein, Tsx CJ259_RS20350 PF07549 SecD/SecF GG Motif CJ259_RS20350 PF02355 Protein export membrane protein CJ259_RS20355 PF07549 SecD/SecF GG Motif CJ259_RS20355 PF13721 SecD export protein N-terminal TM region CJ259_RS20355 PF02355 Protein export membrane protein CJ259_RS20360 PF02699 Preprotein translocase subunit CJ259_RS20365 PF01702 Queuine tRNA-ribosyltransferase CJ259_RS20370 PF02547 Queuosine biosynthesis protein CJ259_RS20375 PF04336 Acyl carrier protein phosphodiesterase CJ259_RS20380 PF10417 C-terminal domain of 1-Cys peroxiredoxin CJ259_RS20380 PF00578 AhpC/TSA family CJ259_RS20385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJ259_RS20395 PF03611 PTS system sugar-specific permease component CJ259_RS20400 PF00294 pfkB family carbohydrate kinase CJ259_RS20405 PF01116 Fructose-bisphosphate aldolase class-II CJ259_RS20410 PF01979 Amidohydrolase family CJ259_RS20420 PF00857 Isochorismatase family CJ259_RS20425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS20425 PF03466 LysR substrate binding domain CJ259_RS20430 PF00128 Alpha amylase, catalytic domain CJ259_RS20430 PF02903 Alpha amylase, N-terminal ig-like domain CJ259_RS20435 PF00324 Amino acid permease CJ259_RS20440 PF05525 Branched-chain amino acid transport protein CJ259_RS20445 PF00989 PAS fold CJ259_RS20445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS20445 PF11808 Phosphate regulon sensor protein PhoR CJ259_RS20445 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS20450 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS20450 PF00072 Response regulator receiver domain CJ259_RS20455 PF00149 Calcineurin-like phosphoesterase CJ259_RS20455 PF12320 Type 5 capsule protein repressor C-terminal domain CJ259_RS20460 PF13476 AAA domain CJ259_RS20465 PF00480 ROK family CJ259_RS20470 PF04381 Putative exonuclease, RdgC CJ259_RS20475 PF06865 Pyrimidine/purine nucleoside phosphorylase CJ259_RS20480 PF07302 AroM protein CJ259_RS20485 PF16362 YaiA protein CJ259_RS20490 PF01202 Shikimate kinase CJ259_RS20495 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) CJ259_RS20500 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CJ259_RS20505 PF14748 Pyrroline-5-carboxylate reductase dimerisation CJ259_RS20505 PF03807 NADP oxidoreductase coenzyme F420-dependent CJ259_RS20510 PF07769 psiF repeat CJ259_RS20515 PF00245 Alkaline phosphatase CJ259_RS20520 PF10796 Sigma-S stabilisation anti-adaptor protein CJ259_RS20525 PF07690 Major Facilitator Superfamily CJ259_RS20535 PF07478 D-ala D-ala ligase C-terminus CJ259_RS20535 PF01820 D-ala D-ala ligase N-terminus CJ259_RS20540 PF10953 Protein of unknown function (DUF2754) CJ259_RS20545 PF10954 Protein of unknown function (DUF2755) CJ259_RS20550 PF07759 Protein of unknown function (DUF1615) CJ259_RS20555 PF05992 SbmA/BacA-like family CJ259_RS20560 PF00857 Isochorismatase family CJ259_RS20565 PF00144 Beta-lactamase CJ259_RS20570 PF00490 Delta-aminolevulinic acid dehydratase CJ259_RS20580 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CJ259_RS20585 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS20590 PF00005 ABC transporter CJ259_RS20595 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CJ259_RS20600 PF02574 Homocysteine S-methyltransferase CJ259_RS20605 PF00324 Amino acid permease CJ259_RS20610 PF00324 Amino acid permease CJ259_RS20615 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CJ259_RS20620 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CJ259_RS20625 PF13458 Periplasmic binding protein CJ259_RS20630 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS20635 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS20635 PF11862 Domain of unknown function (DUF3382) CJ259_RS20640 PF00005 ABC transporter CJ259_RS20640 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJ259_RS20645 PF00005 ABC transporter CJ259_RS20655 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ259_RS20660 PF00005 ABC transporter CJ259_RS20665 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS20670 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS20685 PF16967 E-set like domain CJ259_RS20685 PF15976 CS1-pili formation C-terminal CJ259_RS20690 PF18649 EcpB C-terminal domain CJ259_RS20695 PF16449 Fimbrillin MatB CJ259_RS20700 PF00196 Bacterial regulatory proteins, luxR family CJ259_RS20705 PF00005 ABC transporter CJ259_RS20715 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS20720 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS20760 PF00877 NlpC/P60 family CJ259_RS20765 PF00267 Gram-negative porin CJ259_RS20770 PF00696 Amino acid kinase family CJ259_RS20770 PF01472 PUA domain CJ259_RS20775 PF00171 Aldehyde dehydrogenase family CJ259_RS20785 PF14659 Phage integrase, N-terminal SAM-like domain CJ259_RS20785 PF00589 Phage integrase family CJ259_RS20785 PF13356 Arm DNA-binding domain CJ259_RS20820 PF02753 Pili assembly chaperone PapD, C-terminal domain CJ259_RS20820 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJ259_RS20825 PF00577 Outer membrane usher protein CJ259_RS20825 PF13954 PapC N-terminal domain CJ259_RS20825 PF13953 PapC C-terminal domain CJ259_RS20835 PF00419 Fimbrial protein CJ259_RS20855 PF17874 MalT-like TPR region CJ259_RS20855 PF00196 Bacterial regulatory proteins, luxR family CJ259_RS20860 PF00676 Dehydrogenase E1 component CJ259_RS20865 PF02779 Transketolase, pyrimidine binding domain CJ259_RS20865 PF02780 Transketolase, C-terminal domain CJ259_RS20870 PF02817 e3 binding domain CJ259_RS20870 PF00364 Biotin-requiring enzyme CJ259_RS20870 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJ259_RS20875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJ259_RS20875 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ259_RS20890 PF01791 DeoC/LacD family aldolase CJ259_RS20900 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJ259_RS20900 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJ259_RS20910 PF01842 ACT domain CJ259_RS20910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJ259_RS20910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJ259_RS20915 PF03611 PTS system sugar-specific permease component CJ259_RS20920 PF13417 Glutathione S-transferase, N-terminal domain CJ259_RS20920 PF00043 Glutathione S-transferase, C-terminal domain CJ259_RS20925 PF13847 Methyltransferase domain CJ259_RS20930 PF09857 Putative toxin of bacterial toxin-antitoxin pair CJ259_RS20940 PF08943 CsiD CJ259_RS20945 PF01266 FAD dependent oxidoreductase CJ259_RS20950 PF00171 Aldehyde dehydrogenase family CJ259_RS20955 PF00202 Aminotransferase class-III CJ259_RS20960 PF00324 Amino acid permease CJ259_RS20965 PF07729 FCD domain CJ259_RS20965 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS20980 PF02563 Polysaccharide biosynthesis/export protein CJ259_RS21000 PF00535 Glycosyl transferase family 2 CJ259_RS21005 PF13439 Glycosyltransferase Family 4 CJ259_RS21005 PF00534 Glycosyl transferases group 1 CJ259_RS21010 PF00534 Glycosyl transferases group 1 CJ259_RS21010 PF13439 Glycosyltransferase Family 4 CJ259_RS21025 PF00132 Bacterial transferase hexapeptide (six repeats) CJ259_RS21030 PF07417 Sigma factor-binding transcriptional regulator Crl CJ259_RS21035 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) CJ259_RS21040 PF00156 Phosphoribosyl transferase domain CJ259_RS21045 PF07687 Peptidase dimerisation domain CJ259_RS21045 PF01546 Peptidase family M20/M25/M40 CJ259_RS21050 PF13673 Acetyltransferase (GNAT) domain CJ259_RS21055 PF11798 IMS family HHH motif CJ259_RS21055 PF00817 impB/mucB/samB family CJ259_RS21055 PF11799 impB/mucB/samB family C-terminal domain CJ259_RS21060 PF03009 Glycerophosphoryl diester phosphodiesterase family CJ259_RS21065 PF04400 (Na+)-NQR maturation NqrM CJ259_RS21070 PF00970 Oxidoreductase FAD-binding domain CJ259_RS21070 PF00111 2Fe-2S iron-sulfur cluster binding domain CJ259_RS21070 PF00175 Oxidoreductase NAD-binding domain CJ259_RS21075 PF02508 Rnf-Nqr subunit, membrane protein CJ259_RS21080 PF02508 Rnf-Nqr subunit, membrane protein CJ259_RS21085 PF04205 FMN-binding domain CJ259_RS21090 PF03116 NQR2, RnfD, RnfE family CJ259_RS21095 PF11973 NQRA C-terminal domain CJ259_RS21095 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CJ259_RS21105 PF03734 L,D-transpeptidase catalytic domain CJ259_RS21110 PF13230 Glutamine amidotransferases class-II CJ259_RS21115 PF13580 SIS domain CJ259_RS21120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJ259_RS21120 PF02770 Acyl-CoA dehydrogenase, middle domain CJ259_RS21120 PF09317 Domain of unknown function (DUF1974) CJ259_RS21120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJ259_RS21125 PF00795 Carbon-nitrogen hydrolase CJ259_RS21130 PF01810 LysE type translocator CJ259_RS21135 PF03466 LysR substrate binding domain CJ259_RS21135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS21145 PF00929 Exonuclease CJ259_RS21150 PF00075 RNase H CJ259_RS21155 PF08241 Methyltransferase domain CJ259_RS21160 PF16123 Hydroxyacylglutathione hydrolase C-terminus CJ259_RS21160 PF00753 Metallo-beta-lactamase superfamily CJ259_RS21165 PF01476 LysM domain CJ259_RS21165 PF01464 Transglycosylase SLT domain CJ259_RS21170 PF08241 Methyltransferase domain CJ259_RS21175 PF03372 Endonuclease/Exonuclease/phosphatase family CJ259_RS21180 PF07690 Major Facilitator Superfamily CJ259_RS21185 PF03466 LysR substrate binding domain CJ259_RS21185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS21190 PF00248 Aldo/keto reductase family CJ259_RS21230 PF09383 NIL domain CJ259_RS21230 PF00005 ABC transporter CJ259_RS21235 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS21240 PF03180 NLPA lipoprotein CJ259_RS21245 PF16358 RcsF lipoprotein CJ259_RS21250 PF18389 TrmO C-terminal domain CJ259_RS21250 PF01980 tRNA-methyltransferase O CJ259_RS21255 PF04073 Aminoacyl-tRNA editing domain CJ259_RS21255 PF03129 Anticodon binding domain CJ259_RS21255 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJ259_RS21260 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CJ259_RS21265 PF04170 NlpE N-terminal domain CJ259_RS21265 PF17185 NlpE C-terminal OB domain CJ259_RS21270 PF00472 RF-1 domain CJ259_RS21275 PF07152 YaeQ protein CJ259_RS21280 PF06786 Uncharacterised protein family (UPF0253) CJ259_RS21285 PF07073 Modulator of Rho-dependent transcription termination (ROF) CJ259_RS21290 PF09179 TilS substrate binding domain CJ259_RS21290 PF01171 PP-loop family CJ259_RS21290 PF11734 TilS substrate C-terminal domain CJ259_RS21295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJ259_RS21300 PF01276 Orn/Lys/Arg decarboxylase, major domain CJ259_RS21300 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CJ259_RS21300 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CJ259_RS21305 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CJ259_RS21310 PF01336 OB-fold nucleic acid binding domain CJ259_RS21310 PF02811 PHP domain CJ259_RS21310 PF14579 Helix-hairpin-helix motif CJ259_RS21310 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CJ259_RS21310 PF07733 Bacterial DNA polymerase III alpha NTPase domain CJ259_RS21315 PF01351 Ribonuclease HII CJ259_RS21320 PF02684 Lipid-A-disaccharide synthetase CJ259_RS21325 PF00132 Bacterial transferase hexapeptide (six repeats) CJ259_RS21325 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CJ259_RS21330 PF07977 FabA-like domain CJ259_RS21335 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CJ259_RS21335 PF00132 Bacterial transferase hexapeptide (six repeats) CJ259_RS21340 PF03938 Outer membrane protein (OmpH-like) CJ259_RS21345 PF01103 Surface antigen CJ259_RS21345 PF07244 Surface antigen variable number repeat CJ259_RS21350 PF02163 Peptidase family M50 CJ259_RS21350 PF17820 PDZ domain CJ259_RS21360 PF01255 Putative undecaprenyl diphosphate synthase CJ259_RS21370 PF13288 DXP reductoisomerase C-terminal domain CJ259_RS21370 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CJ259_RS21370 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CJ259_RS21375 PF01765 Ribosome recycling factor CJ259_RS21380 PF00696 Amino acid kinase family CJ259_RS21385 PF00889 Elongation factor TS CJ259_RS21390 PF00318 Ribosomal protein S2 CJ259_RS21395 PF00557 Metallopeptidase family M24 CJ259_RS21400 PF01909 Nucleotidyltransferase domain CJ259_RS21400 PF08335 GlnD PII-uridylyltransferase CJ259_RS21400 PF01842 ACT domain CJ259_RS21400 PF01966 HD domain CJ259_RS21405 PF00132 Bacterial transferase hexapeptide (six repeats) CJ259_RS21405 PF14602 Hexapeptide repeat of succinyl-transferase CJ259_RS21405 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CJ259_RS21410 PF11944 Protein of unknown function (DUF3461) CJ259_RS21415 PF05651 Putative sugar diacid recognition CJ259_RS21415 PF13556 PucR C-terminal helix-turn-helix domain CJ259_RS21415 PF17853 GGDEF-like domain CJ259_RS21420 PF00595 PDZ domain CJ259_RS21425 PF01966 HD domain CJ259_RS21425 PF13286 Phosphohydrolase-associated domain CJ259_RS21430 PF01048 Phosphorylase superfamily CJ259_RS21435 PF01497 Periplasmic binding protein CJ259_RS21440 PF03458 UPF0126 domain CJ259_RS21445 PF01521 Iron-sulphur cluster biosynthesis CJ259_RS21450 PF00654 Voltage gated chloride channel CJ259_RS21455 PF00202 Aminotransferase class-III CJ259_RS21460 PF01032 FecCD transport family CJ259_RS21465 PF01497 Periplasmic binding protein CJ259_RS21470 PF00005 ABC transporter CJ259_RS21475 PF00593 TonB dependent receptor CJ259_RS21475 PF07715 TonB-dependent Receptor Plug Domain CJ259_RS21480 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal CJ259_RS21480 PF00912 Transglycosylase CJ259_RS21480 PF14814 Bifunctional transglycosylase second domain CJ259_RS21480 PF00905 Penicillin binding protein transpeptidase domain CJ259_RS21485 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CJ259_RS21490 PF16537 Type II secretion system protein B CJ259_RS21495 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CJ259_RS21495 PF17967 Pullulanase N2 domain CJ259_RS21495 PF03714 Bacterial pullanase-associated domain CJ259_RS21495 PF11852 Domain of unknown function (DUF3372) CJ259_RS21495 PF18494 Pullulanase Ins domain CJ259_RS21500 PF11356 Type II secretion system protein C CJ259_RS21505 PF00263 Bacterial type II and III secretion system protein CJ259_RS21505 PF03958 Bacterial type II/III secretion system short domain CJ259_RS21510 PF00437 Type II/IV secretion system protein CJ259_RS21515 PF00482 Type II secretion system (T2SS), protein F CJ259_RS21520 PF07963 Prokaryotic N-terminal methylation motif CJ259_RS21520 PF08334 Type II secretion system (T2SS), protein G CJ259_RS21525 PF07963 Prokaryotic N-terminal methylation motif CJ259_RS21530 PF07963 Prokaryotic N-terminal methylation motif CJ259_RS21530 PF02501 Type II secretion system (T2SS), protein I CJ259_RS21535 PF11612 Type II secretion system (T2SS), protein J CJ259_RS21535 PF07963 Prokaryotic N-terminal methylation motif CJ259_RS21540 PF03934 Type II secretion system (T2SS), protein K CJ259_RS21545 PF12693 GspL periplasmic domain CJ259_RS21545 PF05134 Type II secretion system (T2SS), protein L CJ259_RS21550 PF04612 Type II secretion system (T2SS), protein M CJ259_RS21555 PF01203 Type II secretion system (T2SS), protein N CJ259_RS21560 PF06750 Bacterial Peptidase A24 N-terminal domain CJ259_RS21560 PF01478 Type IV leader peptidase family CJ259_RS21565 PF00271 Helicase conserved C-terminal domain CJ259_RS21565 PF08482 ATP-dependent helicase C-terminal CJ259_RS21565 PF00270 DEAD/DEAH box helicase CJ259_RS21565 PF04408 Helicase associated domain (HA2) CJ259_RS21570 PF02834 LigT like Phosphoesterase CJ259_RS21575 PF03749 Sugar fermentation stimulation protein RE domain CJ259_RS21575 PF17746 SfsA N-terminal OB domain CJ259_RS21580 PF01258 Prokaryotic dksA/traR C4-type zinc finger CJ259_RS21585 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJ259_RS21590 PF01743 Poly A polymerase head domain CJ259_RS21590 PF12626 Polymerase A arginine-rich C-terminus CJ259_RS21590 PF12627 Probable RNA and SrmB- binding site of polymerase A CJ259_RS21595 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CJ259_RS21600 PF02548 Ketopantoate hydroxymethyltransferase CJ259_RS21605 PF02569 Pantoate-beta-alanine ligase CJ259_RS21610 PF02261 Aspartate decarboxylase CJ259_RS21615 PF01522 Polysaccharide deacetylase CJ259_RS21620 PF03610 PTS system fructose IIA component CJ259_RS21625 PF01061 ABC-2 type transporter CJ259_RS21630 PF00005 ABC transporter CJ259_RS21635 PF00484 Carbonic anhydrase CJ259_RS21640 PF00156 Phosphoribosyl transferase domain CJ259_RS21645 PF01011 PQQ enzyme repeat CJ259_RS21650 PF07732 Multicopper oxidase CJ259_RS21650 PF00394 Multicopper oxidase CJ259_RS21650 PF07731 Multicopper oxidase CJ259_RS21655 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CJ259_RS21670 PF17284 Spermidine synthase tetramerisation domain CJ259_RS21675 PF02675 S-adenosylmethionine decarboxylase CJ259_RS21680 PF06062 Uncharacterised protein family (UPF0231) CJ259_RS21685 PF00330 Aconitase family (aconitate hydratase) CJ259_RS21685 PF06434 Aconitate hydratase 2 N-terminus CJ259_RS21685 PF11791 Aconitate B N-terminal domain CJ259_RS21690 PF11737 Protein of unknown function (DUF3300) CJ259_RS21705 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ259_RS21705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJ259_RS21710 PF02817 e3 binding domain CJ259_RS21710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJ259_RS21710 PF00364 Biotin-requiring enzyme CJ259_RS21715 PF17831 Pyruvate dehydrogenase E1 component middle domain CJ259_RS21715 PF00456 Transketolase, thiamine diphosphate binding domain CJ259_RS21720 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS21720 PF07729 FCD domain CJ259_RS21725 PF00324 Amino acid permease CJ259_RS21735 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain CJ259_RS21735 PF04616 Glycosyl hydrolases family 43 CJ259_RS21740 PF17113 Regulatory signalling modulator protein AmpE CJ259_RS21745 PF01510 N-acetylmuramoyl-L-alanine amidase CJ259_RS21750 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CJ259_RS21750 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CJ259_RS21755 PF07963 Prokaryotic N-terminal methylation motif CJ259_RS21760 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CJ259_RS21760 PF00437 Type II/IV secretion system protein CJ259_RS21765 PF00482 Type II secretion system (T2SS), protein F CJ259_RS21770 PF00478 IMP dehydrogenase / GMP reductase domain CJ259_RS21775 PF01121 Dephospho-CoA kinase CJ259_RS21780 PF07072 Cell division protein CJ259_RS21785 PF03884 DNA gyrase inhibitor YacG CJ259_RS21790 PF00293 NUDIX domain CJ259_RS21795 PF07516 SecA Wing and Scaffold domain CJ259_RS21795 PF02810 SEC-C motif CJ259_RS21795 PF07517 SecA DEAD-like domain CJ259_RS21795 PF01043 SecA preprotein cross-linking domain CJ259_RS21800 PF06558 Secretion monitor precursor protein (SecM) CJ259_RS21805 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CJ259_RS21810 PF12327 FtsZ family, C-terminal domain CJ259_RS21810 PF00091 Tubulin/FtsZ family, GTPase domain CJ259_RS21815 PF02491 SHS2 domain inserted in FTSA CJ259_RS21820 PF03799 Cell division protein FtsQ CJ259_RS21820 PF08478 POTRA domain, FtsQ-type CJ259_RS21825 PF07478 D-ala D-ala ligase C-terminus CJ259_RS21825 PF01820 D-ala D-ala ligase N-terminus CJ259_RS21830 PF08245 Mur ligase middle domain CJ259_RS21830 PF02875 Mur ligase family, glutamate ligase domain CJ259_RS21830 PF01225 Mur ligase family, catalytic domain CJ259_RS21835 PF03033 Glycosyltransferase family 28 N-terminal domain CJ259_RS21835 PF04101 Glycosyltransferase family 28 C-terminal domain CJ259_RS21840 PF01098 Cell cycle protein CJ259_RS21845 PF08245 Mur ligase middle domain CJ259_RS21845 PF02875 Mur ligase family, glutamate ligase domain CJ259_RS21850 PF00953 Glycosyl transferase family 4 CJ259_RS21850 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CJ259_RS21855 PF01225 Mur ligase family, catalytic domain CJ259_RS21855 PF08245 Mur ligase middle domain CJ259_RS21855 PF02875 Mur ligase family, glutamate ligase domain CJ259_RS21860 PF01225 Mur ligase family, catalytic domain CJ259_RS21860 PF02875 Mur ligase family, glutamate ligase domain CJ259_RS21860 PF08245 Mur ligase middle domain CJ259_RS21865 PF00905 Penicillin binding protein transpeptidase domain CJ259_RS21865 PF03717 Penicillin-binding Protein dimerisation domain CJ259_RS21870 PF04999 Cell division protein FtsL CJ259_RS21875 PF01795 MraW methylase family CJ259_RS21880 PF02381 MraZ protein, putative antitoxin-like CJ259_RS21885 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CJ259_RS21885 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS21890 PF10369 Small subunit of acetolactate synthase CJ259_RS21895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJ259_RS21895 PF00205 Thiamine pyrophosphate enzyme, central domain CJ259_RS21895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJ259_RS21905 PF03466 LysR substrate binding domain CJ259_RS21905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS21915 PF08502 LeuA allosteric (dimerisation) domain CJ259_RS21915 PF00682 HMGL-like CJ259_RS21920 PF00180 Isocitrate/isopropylmalate dehydrogenase CJ259_RS21925 PF00330 Aconitase family (aconitate hydratase) CJ259_RS21930 PF00694 Aconitase C-terminal domain CJ259_RS21935 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ259_RS21935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJ259_RS21940 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CJ259_RS21940 PF08501 Shikimate dehydrogenase substrate binding domain CJ259_RS21945 PF07690 Major Facilitator Superfamily CJ259_RS21950 PF01487 Type I 3-dehydroquinase CJ259_RS21955 PF03466 LysR substrate binding domain CJ259_RS21955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS21960 PF07690 Major Facilitator Superfamily CJ259_RS21965 PF07690 Major Facilitator Superfamily CJ259_RS21975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJ259_RS21975 PF12793 Sugar transport-related sRNA regulator N-term CJ259_RS21985 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS21990 PF00005 ABC transporter CJ259_RS21995 PF09335 SNARE associated Golgi protein CJ259_RS22000 PF12833 Helix-turn-helix domain CJ259_RS22000 PF02311 AraC-like ligand binding domain CJ259_RS22005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJ259_RS22010 PF11762 L-arabinose isomerase C-terminal domain CJ259_RS22010 PF02610 L-arabinose isomerase CJ259_RS22015 PF00596 Class II Aldolase and Adducin N-terminal domain CJ259_RS22020 PF00136 DNA polymerase family B CJ259_RS22020 PF03104 DNA polymerase family B, exonuclease domain CJ259_RS22025 PF00176 SNF2 family N-terminal domain CJ259_RS22025 PF18339 RapA N-terminal Tudor like domain 1 CJ259_RS22025 PF12137 RNA polymerase recycling family C-terminal CJ259_RS22025 PF00271 Helicase conserved C-terminal domain CJ259_RS22025 PF18337 RapA N-terminal Tudor like domain CJ259_RS22030 PF00849 RNA pseudouridylate synthase CJ259_RS22035 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CJ259_RS22045 PF03390 2-hydroxycarboxylate transporter family CJ259_RS22050 PF17203 Single cache domain 3 CJ259_RS22050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS22055 PF00072 Response regulator receiver domain CJ259_RS22055 PF12431 Transcriptional regulator CJ259_RS22060 PF05099 Tellurite resistance protein TerB CJ259_RS22060 PF00226 DnaJ domain CJ259_RS22065 PF03968 OstA-like protein CJ259_RS22065 PF04453 LPS transport system D CJ259_RS22070 PF00639 PPIC-type PPIASE domain CJ259_RS22070 PF09312 SurA N-terminal domain CJ259_RS22075 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CJ259_RS22080 PF00398 Ribosomal RNA adenine dimethylase CJ259_RS22085 PF04379 ApaG domain CJ259_RS22090 PF00149 Calcineurin-like phosphoesterase CJ259_RS22100 PF00186 Dihydrofolate reductase CJ259_RS22110 PF02254 TrkA-N domain CJ259_RS22110 PF00999 Sodium/hydrogen exchanger family CJ259_RS22115 PF02525 Flavodoxin-like fold CJ259_RS22120 PF06004 Bacterial protein of unknown function (DUF903) CJ259_RS22125 PF02142 MGS-like domain CJ259_RS22125 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CJ259_RS22125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJ259_RS22130 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CJ259_RS22130 PF00117 Glutamine amidotransferase class-I CJ259_RS22135 PF05173 Dihydrodipicolinate reductase, C-terminus CJ259_RS22135 PF01113 Dihydrodipicolinate reductase, N-terminus CJ259_RS22140 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CJ259_RS22145 PF04223 Citrate lyase, alpha subunit (CitF) CJ259_RS22150 PF03328 HpcH/HpaI aldolase/citrate lyase family CJ259_RS22155 PF06857 Malonate decarboxylase delta subunit (MdcD) CJ259_RS22160 PF00583 Acetyltransferase (GNAT) family CJ259_RS22160 PF08218 Citrate lyase ligase C-terminal domain CJ259_RS22165 PF03390 2-hydroxycarboxylate transporter family CJ259_RS22170 PF04277 Oxaloacetate decarboxylase, gamma chain CJ259_RS22175 PF02436 Conserved carboxylase domain CJ259_RS22175 PF00682 HMGL-like CJ259_RS22175 PF00364 Biotin-requiring enzyme CJ259_RS22180 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CJ259_RS22185 PF17203 Single cache domain 3 CJ259_RS22185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS22190 PF12431 Transcriptional regulator CJ259_RS22190 PF00072 Response regulator receiver domain CJ259_RS22195 PF02272 DHHA1 domain CJ259_RS22195 PF01411 tRNA synthetases class II (A) CJ259_RS22195 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJ259_RS22200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS22200 PF03466 LysR substrate binding domain CJ259_RS22210 PF01156 Inosine-uridine preferring nucleoside hydrolase CJ259_RS22215 PF02401 LytB protein CJ259_RS22220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJ259_RS22225 PF01252 Signal peptidase (SPase) II CJ259_RS22230 PF06827 Zinc finger found in FPG and IleRS CJ259_RS22230 PF08264 Anticodon-binding domain of tRNA CJ259_RS22230 PF00133 tRNA synthetases class I (I, L, M and V) CJ259_RS22235 PF01687 Riboflavin kinase CJ259_RS22235 PF06574 FAD synthetase CJ259_RS22245 PF01649 Ribosomal protein S20 CJ259_RS22250 PF03466 LysR substrate binding domain CJ259_RS22250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS22255 PF06965 Na+/H+ antiporter 1 CJ259_RS22260 PF00226 DnaJ domain CJ259_RS22260 PF00684 DnaJ central domain CJ259_RS22260 PF01556 DnaJ C terminal domain CJ259_RS22265 PF00012 Hsp70 protein CJ259_RS22270 PF10807 Protein of unknown function (DUF2541) CJ259_RS22275 PF03981 Ubiquinol-cytochrome C chaperone CJ259_RS22275 PF13099 Domain of unknown function (DUF3944) CJ259_RS22280 PF01184 GPR1/FUN34/yaaH family CJ259_RS22285 PF07690 Major Facilitator Superfamily CJ259_RS22290 PF00994 Probable molybdopterin binding domain CJ259_RS22295 PF00923 Transaldolase/Fructose-6-phosphate aldolase CJ259_RS22300 PF01235 Sodium:alanine symporter family CJ259_RS22305 PF03883 Peroxide stress protein YaaA CJ259_RS22315 PF14821 Threonine synthase N terminus CJ259_RS22315 PF00291 Pyridoxal-phosphate dependent enzyme CJ259_RS22320 PF08544 GHMP kinases C terminal CJ259_RS22320 PF00288 GHMP kinases N terminal domain CJ259_RS22325 PF13840 ACT domain CJ259_RS22325 PF01842 ACT domain CJ259_RS22325 PF00696 Amino acid kinase family CJ259_RS22325 PF03447 Homoserine dehydrogenase, NAD binding domain CJ259_RS22325 PF00742 Homoserine dehydrogenase CJ259_RS22330 PF08254 Threonine leader peptide CJ259_RS22335 PF00588 SpoU rRNA Methylase family CJ259_RS22350 PF00072 Response regulator receiver domain CJ259_RS22350 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS22355 PF06123 Inner membrane protein CreD CJ259_RS22360 PF00672 HAMP domain CJ259_RS22360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS22360 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS22365 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS22365 PF00072 Response regulator receiver domain CJ259_RS22370 PF05981 CreA protein CJ259_RS22375 PF06445 GyrI-like small molecule binding domain CJ259_RS22375 PF12833 Helix-turn-helix domain CJ259_RS22380 PF00300 Histidine phosphatase superfamily (branch 1) CJ259_RS22385 PF01931 Protein of unknown function DUF84 CJ259_RS22390 PF01371 Trp repressor protein CJ259_RS22395 PF14718 Soluble lytic murein transglycosylase L domain CJ259_RS22395 PF01464 Transglycosylase SLT domain CJ259_RS22400 PF00005 ABC transporter CJ259_RS22400 PF12848 ABC transporter CJ259_RS22405 PF01381 Helix-turn-helix CJ259_RS22405 PF13521 AAA domain CJ259_RS22410 PF18073 Rubredoxin metal binding domain CJ259_RS22415 PF18429 Domain of unknown function (DUF5609) CJ259_RS22425 PF10144 Bacterial virulence factor haemolysin CJ259_RS22430 PF03099 Biotin/lipoate A/B protein ligase family CJ259_RS22430 PF10437 Bacterial lipoate protein ligase C-terminus CJ259_RS22435 PF01048 Phosphorylase superfamily CJ259_RS22440 PF01676 Metalloenzyme superfamily CJ259_RS22445 PF02885 Glycosyl transferase family, helical bundle domain CJ259_RS22445 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CJ259_RS22445 PF00591 Glycosyl transferase family, a/b domain CJ259_RS22450 PF01791 DeoC/LacD family aldolase CJ259_RS22455 PF07670 Nucleoside recognition CJ259_RS22455 PF01773 Na+ dependent nucleoside transporter N-terminus CJ259_RS22455 PF07662 Na+ dependent nucleoside transporter C-terminus CJ259_RS22460 PF01026 TatD related DNase CJ259_RS22465 PF01734 Patatin-like phospholipase CJ259_RS22470 PF07043 Protein of unknown function (DUF1328) CJ259_RS22475 PF04972 BON domain CJ259_RS22480 PF00009 Elongation factor Tu GTP binding domain CJ259_RS22480 PF16658 Class II release factor RF3, C-terminal domain CJ259_RS22480 PF03144 Elongation factor Tu domain 2 CJ259_RS22485 PF13419 Haloacid dehalogenase-like hydrolase CJ259_RS22490 PF00583 Acetyltransferase (GNAT) family CJ259_RS22495 PF03603 DNA polymerase III psi subunit CJ259_RS22500 PF05175 Methyltransferase small domain CJ259_RS22500 PF08468 Methyltransferase small domain N-terminal CJ259_RS22520 PF07256 Protein of unknown function (DUF1435) CJ259_RS22525 PF00990 Diguanylate cyclase, GGDEF domain CJ259_RS22530 PF06276 Ferric iron reductase FhuF-like transporter CJ259_RS22530 PF11575 FhuF 2Fe-2S C-terminal domain CJ259_RS22535 PF02378 Phosphotransferase system, EIIC CJ259_RS22535 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJ259_RS22540 PF04073 Aminoacyl-tRNA editing domain CJ259_RS22545 PF00196 Bacterial regulatory proteins, luxR family CJ259_RS22550 PF00196 Bacterial regulatory proteins, luxR family CJ259_RS22560 PF01494 FAD binding domain CJ259_RS22570 PF06738 Putative threonine/serine exporter CJ259_RS22575 PF12821 Threonine/Serine exporter, ThrE CJ259_RS22580 PF17948 DnaT DNA-binding domain CJ259_RS22585 PF01695 IstB-like ATP binding protein CJ259_RS22590 PF10696 Protein of unknown function (DUF2501) CJ259_RS22595 PF00884 Sulfatase CJ259_RS22600 PF04754 Putative transposase, YhgA-like CJ259_RS22605 PF01380 SIS domain CJ259_RS22610 PF01380 SIS domain CJ259_RS22615 PF03613 PTS system mannose/fructose/sorbose family IID component CJ259_RS22620 PF03609 PTS system sorbose-specific iic component CJ259_RS22625 PF03830 PTS system sorbose subfamily IIB component CJ259_RS22630 PF03610 PTS system fructose IIA component CJ259_RS22630 PF03830 PTS system sorbose subfamily IIB component CJ259_RS22635 PF00874 PRD domain CJ259_RS22635 PF03610 PTS system fructose IIA component CJ259_RS22635 PF00158 Sigma-54 interaction domain CJ259_RS22640 PF00583 Acetyltransferase (GNAT) family CJ259_RS22640 PF00814 Glycoprotease family CJ259_RS22645 PF00583 Acetyltransferase (GNAT) family CJ259_RS22650 PF01418 Helix-turn-helix domain, rpiR family CJ259_RS22650 PF01380 SIS domain CJ259_RS22655 PF01081 KDPG and KHG aldolase CJ259_RS22660 PF05035 2-keto-3-deoxy-galactonokinase CJ259_RS22675 PF07969 Amidohydrolase family CJ259_RS22690 PF02615 Malate/L-lactate dehydrogenase CJ259_RS22695 PF13520 Amino acid permease CJ259_RS22700 PF00171 Aldehyde dehydrogenase family CJ259_RS22705 PF00701 Dihydrodipicolinate synthetase family CJ259_RS22715 PF05544 Proline racemase CJ259_RS22720 PF01266 FAD dependent oxidoreductase CJ259_RS22720 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CJ259_RS22730 PF04324 BFD-like [2Fe-2S] binding domain CJ259_RS22730 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ259_RS22735 PF01047 MarR family CJ259_RS22740 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJ259_RS22745 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJ259_RS22750 PF00171 Aldehyde dehydrogenase family CJ259_RS22755 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CJ259_RS22760 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase CJ259_RS22765 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJ259_RS22770 PF03328 HpcH/HpaI aldolase/citrate lyase family CJ259_RS22775 PF07690 Major Facilitator Superfamily CJ259_RS22780 PF12833 Helix-turn-helix domain CJ259_RS22785 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CJ259_RS22785 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CJ259_RS22790 PF01613 Flavin reductase like domain CJ259_RS22805 PF02554 Carbon starvation protein CstA CJ259_RS22805 PF13722 5TM C-terminal transporter carbon starvation CstA CJ259_RS22810 PF04328 Selenoprotein, putative CJ259_RS22815 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJ259_RS22815 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJ259_RS22825 PF00171 Aldehyde dehydrogenase family CJ259_RS22830 PF04754 Putative transposase, YhgA-like CJ259_RS22835 PF02311 AraC-like ligand binding domain CJ259_RS22835 PF12833 Helix-turn-helix domain CJ259_RS22845 PF04286 Protein of unknown function (DUF445) CJ259_RS22850 PF07690 Major Facilitator Superfamily CJ259_RS22860 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CJ259_RS22865 PF01869 BadF/BadG/BcrA/BcrD ATPase family CJ259_RS22870 PF11823 Protein of unknown function (DUF3343) CJ259_RS22880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJ259_RS22880 PF00529 HlyD membrane-fusion protein of T1SS CJ259_RS22890 PF06568 Domain of unknown function (DUF1127) CJ259_RS22895 PF00155 Aminotransferase class I and II CJ259_RS22895 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS22900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJ259_RS22905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS22905 PF03466 LysR substrate binding domain CJ259_RS22910 PF02525 Flavodoxin-like fold CJ259_RS22930 PF00936 BMC domain CJ259_RS22935 PF00936 BMC domain CJ259_RS22940 PF00936 BMC domain CJ259_RS22945 PF00171 Aldehyde dehydrogenase family CJ259_RS22945 PF00465 Iron-containing alcohol dehydrogenase CJ259_RS22955 PF00465 Iron-containing alcohol dehydrogenase CJ259_RS22960 PF02901 Pyruvate formate lyase-like CJ259_RS22960 PF01228 Glycine radical CJ259_RS22965 PF04055 Radical SAM superfamily CJ259_RS22965 PF13187 4Fe-4S dicluster domain CJ259_RS22970 PF00936 BMC domain CJ259_RS22975 PF06130 Phosphate propanoyltransferase CJ259_RS22985 PF00893 Small Multidrug Resistance protein CJ259_RS22990 PF00893 Small Multidrug Resistance protein CJ259_RS22995 PF00579 tRNA synthetases class I (W and Y) CJ259_RS23000 PF13533 Biotin-lipoyl like CJ259_RS23005 PF00005 ABC transporter CJ259_RS23045 PF08007 Cupin superfamily protein CJ259_RS23060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS23060 PF00672 HAMP domain CJ259_RS23060 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS23065 PF00072 Response regulator receiver domain CJ259_RS23065 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS23070 PF02321 Outer membrane efflux protein CJ259_RS23075 PF11604 Copper binding periplasmic protein CusF CJ259_RS23080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJ259_RS23080 PF00529 HlyD membrane-fusion protein of T1SS CJ259_RS23085 PF00873 AcrB/AcrD/AcrF family CJ259_RS23095 PF08212 Lipocalin-like domain CJ259_RS23100 PF13411 MerR HTH family regulatory protein CJ259_RS23105 PF12680 SnoaL-like domain CJ259_RS23110 PF00106 short chain dehydrogenase CJ259_RS23145 PF08349 Protein of unknown function (DUF1722) CJ259_RS23155 PF02264 LamB porin CJ259_RS23170 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CJ259_RS23170 PF04616 Glycosyl hydrolases family 43 CJ259_RS23185 PF06755 CbtA_toxin of type IV toxin-antitoxin system CJ259_RS23190 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A CJ259_RS23195 PF04002 RadC-like JAB domain CJ259_RS23200 PF03230 Antirestriction protein CJ259_RS23205 PF06067 Domain of unknown function (DUF932) CJ259_RS23220 PF13280 WYL domain CJ259_RS23220 PF08220 DeoR-like helix-turn-helix domain CJ259_RS23240 PF00270 DEAD/DEAH box helicase CJ259_RS23240 PF00271 Helicase conserved C-terminal domain CJ259_RS23240 PF08494 DEAD/H associated CJ259_RS23295 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CJ259_RS23295 PF11867 Domain of unknown function (DUF3387) CJ259_RS23295 PF18766 SWI2/SNF2 ATPase CJ259_RS23305 PF12161 HsdM N-terminal domain CJ259_RS23305 PF02384 N-6 DNA Methylase CJ259_RS23310 PF02384 N-6 DNA Methylase CJ259_RS23340 PF00484 Carbonic anhydrase CJ259_RS23345 PF00916 Sulfate permease family CJ259_RS23345 PF01740 STAS domain CJ259_RS23350 PF00107 Zinc-binding dehydrogenase CJ259_RS23350 PF08240 Alcohol dehydrogenase GroES-like domain CJ259_RS23355 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS23360 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS23365 PF00149 Calcineurin-like phosphoesterase CJ259_RS23370 PF17912 MalK OB fold domain CJ259_RS23370 PF00005 ABC transporter CJ259_RS23375 PF13416 Bacterial extracellular solute-binding protein CJ259_RS23380 PF01261 Xylose isomerase-like TIM barrel CJ259_RS23385 PF01261 Xylose isomerase-like TIM barrel CJ259_RS23390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJ259_RS23390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJ259_RS23395 PF00205 Thiamine pyrophosphate enzyme, central domain CJ259_RS23395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJ259_RS23395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJ259_RS23400 PF00294 pfkB family carbohydrate kinase CJ259_RS23405 PF02685 Glucokinase CJ259_RS23405 PF01418 Helix-turn-helix domain, rpiR family CJ259_RS23405 PF01380 SIS domain CJ259_RS23420 PF04962 KduI/IolB family CJ259_RS23425 PF00171 Aldehyde dehydrogenase family CJ259_RS23435 PF05872 Bacterial protein of unknown function (DUF853) CJ259_RS23440 PF03739 Lipopolysaccharide export system permease LptF/LptG CJ259_RS23445 PF03739 Lipopolysaccharide export system permease LptF/LptG CJ259_RS23455 PF00883 Cytosol aminopeptidase family, catalytic domain CJ259_RS23455 PF02789 Cytosol aminopeptidase family, N-terminal domain CJ259_RS23460 PF04364 DNA polymerase III chi subunit, HolC CJ259_RS23465 PF08264 Anticodon-binding domain of tRNA CJ259_RS23465 PF00133 tRNA synthetases class I (I, L, M and V) CJ259_RS23465 PF10458 Valyl tRNA synthetase tRNA binding arm CJ259_RS23470 PF00583 Acetyltransferase (GNAT) family CJ259_RS23475 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CJ259_RS23480 PF06877 Regulator of ribonuclease activity B CJ259_RS23485 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJ259_RS23485 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJ259_RS23490 PF07702 UTRA domain CJ259_RS23490 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS23495 PF03606 C4-dicarboxylate anaerobic carrier CJ259_RS23500 PF01979 Amidohydrolase family CJ259_RS23505 PF00294 pfkB family carbohydrate kinase CJ259_RS23510 PF01380 SIS domain CJ259_RS23515 PF04074 YhcH/YjgK/YiaL CJ259_RS23530 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJ259_RS23530 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJ259_RS23535 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CJ259_RS23535 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CJ259_RS23540 PF01042 Endoribonuclease L-PSP CJ259_RS23545 PF00689 Cation transporting ATPase, C-terminus CJ259_RS23545 PF00690 Cation transporter/ATPase, N-terminus CJ259_RS23555 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS23560 PF02378 Phosphotransferase system, EIIC CJ259_RS23560 PF00367 phosphotransferase system, EIIB CJ259_RS23565 PF11941 Domain of unknown function (DUF3459) CJ259_RS23565 PF00128 Alpha amylase, catalytic domain CJ259_RS23570 PF02378 Phosphotransferase system, EIIC CJ259_RS23575 PF11975 Family 4 glycosyl hydrolase C-terminal domain CJ259_RS23575 PF02056 Family 4 glycosyl hydrolase CJ259_RS23580 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJ259_RS23590 PF13597 Anaerobic ribonucleoside-triphosphate reductase CJ259_RS23590 PF03477 ATP cone domain CJ259_RS23600 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CJ259_RS23605 PF04221 RelB antitoxin CJ259_RS23610 PF08279 HTH domain CJ259_RS23610 PF00874 PRD domain CJ259_RS23610 PF05043 Mga helix-turn-helix domain CJ259_RS23610 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJ259_RS23615 PF10282 Lactonase, 7-bladed beta-propeller CJ259_RS23620 PF07071 KDGP aldolase CJ259_RS23625 PF03841 L-seryl-tRNA selenium transferase CJ259_RS23630 PF01979 Amidohydrolase family CJ259_RS23660 PF07361 Cytochrome b562 CJ259_RS23665 PF01523 Putative modulator of DNA gyrase CJ259_RS23670 PF04751 Protein of unknown function (DUF615) CJ259_RS23685 PF08245 Mur ligase middle domain CJ259_RS23685 PF02875 Mur ligase family, glutamate ligase domain CJ259_RS23685 PF01225 Mur ligase family, catalytic domain CJ259_RS23690 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CJ259_RS23695 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS23700 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS23705 PF00005 ABC transporter CJ259_RS23710 PF13407 Periplasmic binding protein domain CJ259_RS23715 PF00719 Inorganic pyrophosphatase CJ259_RS23730 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CJ259_RS23735 PF04357 TamB, inner membrane protein subunit of TAM complex CJ259_RS23740 PF17243 POTRA domain TamA domain 1 CJ259_RS23740 PF07244 Surface antigen variable number repeat CJ259_RS23740 PF01103 Surface antigen CJ259_RS23745 PF01625 Peptide methionine sulfoxide reductase CJ259_RS23750 PF01595 Cyclin M transmembrane N-terminal domain CJ259_RS23750 PF03471 Transporter associated domain CJ259_RS23750 PF00571 CBS domain CJ259_RS23755 PF01306 LacY proton/sugar symporter CJ259_RS23760 PF08532 Beta-galactosidase trimerisation domain CJ259_RS23760 PF08533 Beta-galactosidase C-terminal domain CJ259_RS23760 PF02449 Beta-galactosidase CJ259_RS23765 PF02311 AraC-like ligand binding domain CJ259_RS23765 PF12833 Helix-turn-helix domain CJ259_RS23770 PF06526 Protein of unknown function (DUF1107) CJ259_RS23775 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CJ259_RS23780 PF00459 Inositol monophosphatase family CJ259_RS23785 PF02872 5'-nucleotidase, C-terminal domain CJ259_RS23785 PF00149 Calcineurin-like phosphoesterase CJ259_RS23790 PF01638 HxlR-like helix-turn-helix CJ259_RS23795 PF05368 NmrA-like family CJ259_RS23800 PF12833 Helix-turn-helix domain CJ259_RS23805 PF00892 EamA-like transporter family CJ259_RS23810 PF01814 Hemerythrin HHE cation binding domain CJ259_RS23810 PF04405 Domain of Unknown function (DUF542) CJ259_RS23815 PF00324 Amino acid permease CJ259_RS23820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJ259_RS23820 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CJ259_RS23825 PF04225 Opacity-associated protein A LysM-like domain CJ259_RS23825 PF08525 Opacity-associated protein A N-terminal motif CJ259_RS23830 PF03948 Ribosomal protein L9, C-terminal domain CJ259_RS23830 PF01281 Ribosomal protein L9, N-terminal domain CJ259_RS23835 PF01084 Ribosomal protein S18 CJ259_RS23840 PF00436 Single-strand binding protein family CJ259_RS23845 PF01250 Ribosomal protein S6 CJ259_RS23850 PF07338 Protein of unknown function (DUF1471) CJ259_RS23855 PF07690 Major Facilitator Superfamily CJ259_RS23860 PF00596 Class II Aldolase and Adducin N-terminal domain CJ259_RS23865 PF01261 Xylose isomerase-like TIM barrel CJ259_RS23870 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CJ259_RS23875 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJ259_RS23880 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJ259_RS23885 PF03611 PTS system sugar-specific permease component CJ259_RS23895 PF08220 DeoR-like helix-turn-helix domain CJ259_RS23895 PF00455 DeoR C terminal sensor domain CJ259_RS23900 PF00326 Prolyl oligopeptidase family CJ259_RS23905 PF07338 Protein of unknown function (DUF1471) CJ259_RS23910 PF07338 Protein of unknown function (DUF1471) CJ259_RS23915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJ259_RS23915 PF18158 Adaptive response protein AidB N-terminal domain CJ259_RS23915 PF02770 Acyl-CoA dehydrogenase, middle domain CJ259_RS23920 PF08032 RNA 2'-O ribose methyltransferase substrate binding CJ259_RS23920 PF00588 SpoU rRNA Methylase family CJ259_RS23925 PF08206 Ribonuclease B OB domain CJ259_RS23925 PF00773 RNB domain CJ259_RS23925 PF08461 Ribonuclease R winged-helix domain CJ259_RS23925 PF17876 Cold shock domain CJ259_RS23925 PF00575 S1 RNA binding domain CJ259_RS23930 PF02082 Transcriptional regulator CJ259_RS23935 PF00709 Adenylosuccinate synthetase CJ259_RS23940 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CJ259_RS23950 PF01145 SPFH domain / Band 7 family CJ259_RS23955 PF12221 Bacterial membrane protein N terminal CJ259_RS23955 PF01145 SPFH domain / Band 7 family CJ259_RS23960 PF13167 GTP-binding GTPase N-terminal CJ259_RS23960 PF01926 50S ribosome-binding GTPase CJ259_RS23960 PF16360 GTP-binding GTPase Middle Region CJ259_RS23965 PF17209 Hfq protein CJ259_RS23975 PF01119 DNA mismatch repair protein, C-terminal domain CJ259_RS23975 PF08676 MutL C terminal dimerisation domain CJ259_RS23980 PF01520 N-acetylmuramoyl-L-alanine amidase CJ259_RS23985 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CJ259_RS23990 PF03853 YjeF-related protein N-terminus CJ259_RS23990 PF01256 Carbohydrate kinase CJ259_RS23995 PF08331 Domain of unknown function (DUF1730) CJ259_RS24020 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJ259_RS24025 PF00929 Exonuclease CJ259_RS24035 PF03193 RsgA GTPase CJ259_RS24040 PF02666 Phosphatidylserine decarboxylase CJ259_RS24045 PF12794 Mechanosensitive ion channel inner membrane domain 1 CJ259_RS24045 PF12795 Mechanosensitive ion channel porin domain CJ259_RS24045 PF00924 Mechanosensitive ion channel CJ259_RS24050 PF13520 Amino acid permease CJ259_RS24055 PF00152 tRNA synthetases class II (D, K and N) CJ259_RS24060 PF02910 Fumarate reductase flavoprotein C-term CJ259_RS24060 PF00890 FAD binding domain CJ259_RS24065 PF13085 2Fe-2S iron-sulfur cluster binding domain CJ259_RS24065 PF13183 4Fe-4S dicluster domain CJ259_RS24070 PF02300 Fumarate reductase subunit C CJ259_RS24075 PF02313 Fumarate reductase subunit D CJ259_RS24080 PF08212 Lipocalin-like domain CJ259_RS24085 PF00893 Small Multidrug Resistance protein CJ259_RS24090 PF08085 Entericidin EcnA/B family CJ259_RS24100 PF09285 Elongation factor P, C-terminal CJ259_RS24100 PF08207 Elongation factor P (EF-P) KOW-like domain CJ259_RS24100 PF01132 Elongation factor P (EF-P) OB domain CJ259_RS24105 PF04055 Radical SAM superfamily CJ259_RS24120 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJ259_RS24120 PF02753 Pili assembly chaperone PapD, C-terminal domain CJ259_RS24125 PF00577 Outer membrane usher protein CJ259_RS24125 PF13954 PapC N-terminal domain CJ259_RS24125 PF13953 PapC C-terminal domain CJ259_RS24145 PF00529 HlyD membrane-fusion protein of T1SS CJ259_RS24145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJ259_RS24150 PF03412 Peptidase C39 family CJ259_RS24150 PF00005 ABC transporter CJ259_RS24150 PF00664 ABC transporter transmembrane region CJ259_RS24160 PF13698 Domain of unknown function (DUF4156) CJ259_RS24165 PF00118 TCP-1/cpn60 chaperonin family CJ259_RS24170 PF00166 Chaperonin 10 Kd subunit CJ259_RS24175 PF13520 Amino acid permease CJ259_RS24180 PF04186 FxsA cytoplasmic membrane protein CJ259_RS24190 PF00206 Lyase CJ259_RS24190 PF10415 Fumarase C C-terminus CJ259_RS24195 PF03605 Anaerobic c4-dicarboxylate membrane transporter CJ259_RS24200 PF03091 CutA1 divalent ion tolerance protein CJ259_RS24205 PF02683 Cytochrome C biogenesis protein transmembrane region CJ259_RS24205 PF11412 Disulphide bond corrector protein DsbC CJ259_RS24250 PF14883 Hypothetical glycosyl hydrolase family 13 CJ259_RS24250 PF01522 Polysaccharide deacetylase CJ259_RS24255 PF00535 Glycosyl transferase family 2 CJ259_RS24275 PF03741 Integral membrane protein TerC family CJ259_RS24280 PF00226 DnaJ domain CJ259_RS24280 PF01556 DnaJ C terminal domain CJ259_RS24295 PF06406 StbA protein CJ259_RS24310 PF11975 Family 4 glycosyl hydrolase C-terminal domain CJ259_RS24310 PF02056 Family 4 glycosyl hydrolase CJ259_RS24320 PF12833 Helix-turn-helix domain CJ259_RS24325 PF00083 Sugar (and other) transporter CJ259_RS24325 PF08946 Osmosensory transporter coiled coil CJ259_RS24335 PF03831 PhnA domain CJ259_RS24335 PF08274 PhnA Zinc-Ribbon CJ259_RS24340 PF06983 3-demethylubiquinone-9 3-methyltransferase CJ259_RS24345 PF07702 UTRA domain CJ259_RS24345 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS24350 PF06754 Phosphonate metabolism protein PhnG CJ259_RS24355 PF05845 Bacterial phosphonate metabolism protein (PhnH) CJ259_RS24360 PF05861 Bacterial phosphonate metabolism protein (PhnI) CJ259_RS24365 PF06007 Phosphonate metabolism protein PhnJ CJ259_RS24370 PF00005 ABC transporter CJ259_RS24375 PF00005 ABC transporter CJ259_RS24380 PF07969 Amidohydrolase family CJ259_RS24390 PF12706 Beta-lactamase superfamily domain CJ259_RS24400 PF00072 Response regulator receiver domain CJ259_RS24400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS24400 PF13426 PAS domain CJ259_RS24405 PF00005 ABC transporter CJ259_RS24410 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS24415 PF13407 Periplasmic binding protein domain CJ259_RS24435 PF00072 Response regulator receiver domain CJ259_RS24435 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS24445 PF08238 Sel1 repeat CJ259_RS24450 PF00375 Sodium:dicarboxylate symporter family CJ259_RS24460 PF13193 AMP-binding enzyme C-terminal domain CJ259_RS24460 PF16177 Acetyl-coenzyme A synthetase N-terminus CJ259_RS24460 PF00501 AMP-binding enzyme CJ259_RS24470 PF04341 Protein of unknown function, DUF485 CJ259_RS24475 PF00474 Sodium:solute symporter family CJ259_RS24490 PF13954 PapC N-terminal domain CJ259_RS24490 PF00577 Outer membrane usher protein CJ259_RS24490 PF13953 PapC C-terminal domain CJ259_RS24495 PF02753 Pili assembly chaperone PapD, C-terminal domain CJ259_RS24495 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CJ259_RS24500 PF00419 Fimbrial protein CJ259_RS24505 PF04172 LrgB-like family CJ259_RS24510 PF03788 LrgA family CJ259_RS24515 PF03466 LysR substrate binding domain CJ259_RS24515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS24520 PF00999 Sodium/hydrogen exchanger family CJ259_RS24525 PF00860 Permease family CJ259_RS24530 PF00043 Glutathione S-transferase, C-terminal domain CJ259_RS24530 PF02798 Glutathione S-transferase, N-terminal domain CJ259_RS24535 PF00376 MerR family regulatory protein CJ259_RS24535 PF09278 MerR, DNA binding CJ259_RS24540 PF12833 Helix-turn-helix domain CJ259_RS24545 PF00563 EAL domain CJ259_RS24545 PF12792 CSS motif domain associated with EAL CJ259_RS24555 PF15940 Family of unknown function CJ259_RS24560 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS24575 PF00005 ABC transporter CJ259_RS24575 PF08402 TOBE domain CJ259_RS24580 PF00753 Metallo-beta-lactamase superfamily CJ259_RS24580 PF12706 Beta-lactamase superfamily domain CJ259_RS24585 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS24590 PF00459 Inositol monophosphatase family CJ259_RS24605 PF01103 Surface antigen CJ259_RS24605 PF07244 Surface antigen variable number repeat CJ259_RS24615 PF07519 Tannase and feruloyl esterase CJ259_RS24620 PF12833 Helix-turn-helix domain CJ259_RS24625 PF00593 TonB dependent receptor CJ259_RS24625 PF07715 TonB-dependent Receptor Plug Domain CJ259_RS24630 PF01464 Transglycosylase SLT domain CJ259_RS24635 PF00436 Single-strand binding protein family CJ259_RS24645 PF00005 ABC transporter CJ259_RS24645 PF17755 UvrA DNA-binding domain CJ259_RS24645 PF17760 UvrA interaction domain CJ259_RS24650 PF04237 YjbR CJ259_RS24655 PF01894 Uncharacterised protein family UPF0047 CJ259_RS24660 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CJ259_RS24665 PF00155 Aminotransferase class I and II CJ259_RS24670 PF00842 Alanine racemase, C-terminal domain CJ259_RS24670 PF01168 Alanine racemase, N-terminal domain CJ259_RS24675 PF00772 DnaB-like helicase N terminal domain CJ259_RS24675 PF03796 DnaB-like helicase C terminal domain CJ259_RS24680 PF00107 Zinc-binding dehydrogenase CJ259_RS24680 PF08240 Alcohol dehydrogenase GroES-like domain CJ259_RS24685 PF09583 Phage shock protein G (Phageshock_PspG) CJ259_RS24690 PF01207 Dihydrouridine synthase (Dus) CJ259_RS24700 PF01475 Ferric uptake regulator family CJ259_RS24705 PF05532 CsbD-like CJ259_RS24710 PF01554 MatE CJ259_RS24715 PF00717 Peptidase S24-like CJ259_RS24715 PF01726 LexA DNA binding domain CJ259_RS24720 PF01219 Prokaryotic diacylglycerol kinase CJ259_RS24725 PF01553 Acyltransferase CJ259_RS24730 PF01040 UbiA prenyltransferase family CJ259_RS24735 PF04345 Chorismate lyase CJ259_RS24740 PF07148 Maltose operon periplasmic protein precursor (MalM) CJ259_RS24745 PF02264 LamB porin CJ259_RS24750 PF00005 ABC transporter CJ259_RS24750 PF17912 MalK OB fold domain CJ259_RS24760 PF01547 Bacterial extracellular solute-binding protein CJ259_RS24765 PF14785 Maltose transport system permease protein MalF P2 domain CJ259_RS24765 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS24770 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS24775 PF06146 Phosphate-starvation-inducible E CJ259_RS24780 PF03313 Serine dehydratase alpha chain CJ259_RS24795 PF01042 Endoribonuclease L-PSP CJ259_RS24805 PF12804 MobA-like NTP transferase domain CJ259_RS24805 PF00132 Bacterial transferase hexapeptide (six repeats) CJ259_RS24805 PF14602 Hexapeptide repeat of succinyl-transferase CJ259_RS24810 PF00342 Phosphoglucose isomerase CJ259_RS24825 PF01842 ACT domain CJ259_RS24825 PF00696 Amino acid kinase family CJ259_RS24830 PF01758 Sodium Bile acid symporter family CJ259_RS24835 PF11656 YjbD family (DUF3811) CJ259_RS24840 PF00849 RNA pseudouridylate synthase CJ259_RS24840 PF01479 S4 domain CJ259_RS24845 PF04198 Putative sugar-binding domain CJ259_RS24845 PF13936 Helix-turn-helix domain CJ259_RS24850 PF00106 short chain dehydrogenase CJ259_RS24855 PF03610 PTS system fructose IIA component CJ259_RS24860 PF03830 PTS system sorbose subfamily IIB component CJ259_RS24865 PF03609 PTS system sorbose-specific iic component CJ259_RS24870 PF03613 PTS system mannose/fructose/sorbose family IID component CJ259_RS24875 PF00107 Zinc-binding dehydrogenase CJ259_RS24875 PF08240 Alcohol dehydrogenase GroES-like domain CJ259_RS24880 PF08501 Shikimate dehydrogenase substrate binding domain CJ259_RS24885 PF02690 Na+/Pi-cotransporter CJ259_RS24890 PF02607 B12 binding domain CJ259_RS24890 PF02574 Homocysteine S-methyltransferase CJ259_RS24890 PF02965 Vitamin B12 dependent methionine synthase, activation domain CJ259_RS24890 PF02310 B12 binding domain CJ259_RS24890 PF00809 Pterin binding enzyme CJ259_RS24895 PF09339 IclR helix-turn-helix domain CJ259_RS24895 PF01614 Bacterial transcriptional regulator CJ259_RS24900 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CJ259_RS24905 PF00463 Isocitrate lyase family CJ259_RS24910 PF01274 Malate synthase CJ259_RS24915 PF04204 Homoserine O-succinyltransferase CJ259_RS24920 PF13673 Acetyltransferase (GNAT) domain CJ259_RS24950 PF01808 AICARFT/IMPCHase bienzyme CJ259_RS24950 PF02142 MGS-like domain CJ259_RS24955 PF02844 Phosphoribosylglycinamide synthetase, N domain CJ259_RS24955 PF02843 Phosphoribosylglycinamide synthetase, C domain CJ259_RS24955 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CJ259_RS24960 PF00158 Sigma-54 interaction domain CJ259_RS24960 PF00072 Response regulator receiver domain CJ259_RS24960 PF02954 Bacterial regulatory protein, Fis family CJ259_RS24965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS24965 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS24970 PF13801 Heavy-metal resistance CJ259_RS24975 PF07356 Protein of unknown function (DUF1481) CJ259_RS24980 PF00216 Bacterial DNA-binding protein CJ259_RS24985 PF04222 Protein of unknown function (DUF416) CJ259_RS24990 PF04493 Endonuclease V CJ259_RS24995 PF01208 Uroporphyrinogen decarboxylase (URO-D) CJ259_RS25000 PF09297 NADH pyrophosphatase zinc ribbon domain CJ259_RS25000 PF00293 NUDIX domain CJ259_RS25005 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CJ259_RS25010 PF13667 ThiC-associated domain CJ259_RS25010 PF01964 Radical SAM ThiC family CJ259_RS25015 PF02581 Thiamine monophosphate synthase CJ259_RS25020 PF00899 ThiF family CJ259_RS25025 PF02597 ThiS family CJ259_RS25030 PF05690 Thiazole biosynthesis protein ThiG CJ259_RS25035 PF06968 Biotin and Thiamin Synthesis associated domain CJ259_RS25035 PF04055 Radical SAM superfamily CJ259_RS25045 PF00990 Diguanylate cyclase, GGDEF domain CJ259_RS25050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CJ259_RS25055 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CJ259_RS25060 PF03605 Anaerobic c4-dicarboxylate membrane transporter CJ259_RS25065 PF04998 RNA polymerase Rpb1, domain 5 CJ259_RS25065 PF04983 RNA polymerase Rpb1, domain 3 CJ259_RS25065 PF05000 RNA polymerase Rpb1, domain 4 CJ259_RS25065 PF00623 RNA polymerase Rpb1, domain 2 CJ259_RS25065 PF04997 RNA polymerase Rpb1, domain 1 CJ259_RS25070 PF04560 RNA polymerase Rpb2, domain 7 CJ259_RS25070 PF00562 RNA polymerase Rpb2, domain 6 CJ259_RS25070 PF10385 RNA polymerase beta subunit external 1 domain CJ259_RS25070 PF04565 RNA polymerase Rpb2, domain 3 CJ259_RS25070 PF04563 RNA polymerase beta subunit CJ259_RS25070 PF04561 RNA polymerase Rpb2, domain 2 CJ259_RS25075 PF16320 Ribosomal protein L7/L12 dimerisation domain CJ259_RS25075 PF00542 Ribosomal protein L7/L12 C-terminal domain CJ259_RS25080 PF00466 Ribosomal protein L10 CJ259_RS25090 PF00687 Ribosomal protein L1p/L10e family CJ259_RS25095 PF03946 Ribosomal protein L11, N-terminal domain CJ259_RS25095 PF00298 Ribosomal protein L11, RNA binding domain CJ259_RS25100 PF02357 Transcription termination factor nusG CJ259_RS25100 PF00467 KOW motif CJ259_RS25105 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CJ259_RS25115 PF03143 Elongation factor Tu C-terminal domain CJ259_RS25115 PF03144 Elongation factor Tu domain 2 CJ259_RS25115 PF00009 Elongation factor Tu GTP binding domain CJ259_RS25140 PF00485 Phosphoribulokinase / Uridine kinase family CJ259_RS25145 PF08279 HTH domain CJ259_RS25145 PF02237 Biotin protein ligase C terminal domain CJ259_RS25145 PF03099 Biotin/lipoate A/B protein ligase family CJ259_RS25150 PF01565 FAD binding domain CJ259_RS25150 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CJ259_RS25180 PF12724 Flavodoxin domain CJ259_RS25185 PF02386 Cation transport protein CJ259_RS25190 PF09186 Domain of unknown function (DUF1949) CJ259_RS25190 PF01205 Uncharacterized protein family UPF0029 CJ259_RS25195 PF00557 Metallopeptidase family M24 CJ259_RS25205 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJ259_RS25205 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJ259_RS25205 PF00378 Enoyl-CoA hydratase/isomerase CJ259_RS25210 PF00108 Thiolase, N-terminal domain CJ259_RS25210 PF02803 Thiolase, C-terminal domain CJ259_RS25215 PF00970 Oxidoreductase FAD-binding domain CJ259_RS25215 PF00175 Oxidoreductase NAD-binding domain CJ259_RS25220 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CJ259_RS25225 PF02357 Transcription termination factor nusG CJ259_RS25230 PF01026 TatD related DNase CJ259_RS25235 PF00902 Sec-independent protein translocase protein (TatC) CJ259_RS25245 PF02416 mttA/Hcf106 family CJ259_RS25250 PF03109 ABC1 family CJ259_RS25255 PF02036 SCP-2 sterol transfer family CJ259_RS25260 PF01209 ubiE/COQ5 methyltransferase family CJ259_RS25265 PF02646 RmuC family CJ259_RS25270 PF01048 Phosphorylase superfamily CJ259_RS25275 PF01738 Dienelactone hydrolase family CJ259_RS25280 PF01717 Cobalamin-independent synthase, Catalytic domain CJ259_RS25280 PF08267 Cobalamin-independent synthase, N-terminal domain CJ259_RS25285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS25285 PF03466 LysR substrate binding domain CJ259_RS25290 PF00892 EamA-like transporter family CJ259_RS25300 PF12146 Serine aminopeptidase, S33 CJ259_RS25305 PF01810 LysE type translocator CJ259_RS25310 PF04754 Putative transposase, YhgA-like CJ259_RS25315 PF01810 LysE type translocator CJ259_RS25320 PF00570 HRDC domain CJ259_RS25320 PF09382 RQC domain CJ259_RS25320 PF00270 DEAD/DEAH box helicase CJ259_RS25320 PF00271 Helicase conserved C-terminal domain CJ259_RS25320 PF16124 RecQ zinc-binding CJ259_RS25325 PF02253 Phospholipase A1 CJ259_RS25330 PF03061 Thioesterase superfamily CJ259_RS25335 PF00892 EamA-like transporter family CJ259_RS25340 PF01544 CorA-like Mg2+ transporter protein CJ259_RS25350 PF00580 UvrD/REP helicase N-terminal domain CJ259_RS25350 PF13361 UvrD-like helicase C-terminal domain CJ259_RS25355 PF13419 Haloacid dehalogenase-like hydrolase CJ259_RS25360 PF02899 Phage integrase, N-terminal SAM-like domain CJ259_RS25360 PF00589 Phage integrase family CJ259_RS25365 PF04340 Protein of unknown function, DUF484 CJ259_RS25370 PF01678 Diaminopimelate epimerase CJ259_RS25375 PF13627 Prokaryotic lipoprotein-attachment site CJ259_RS25380 PF01491 Frataxin-like domain CJ259_RS25385 PF01295 Adenylate cyclase, class-I CJ259_RS25385 PF12633 Adenylate cyclase NT domain CJ259_RS25390 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CJ259_RS25390 PF03900 Porphobilinogen deaminase, C-terminal domain CJ259_RS25395 PF02602 Uroporphyrinogen-III synthase HemD CJ259_RS25400 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CJ259_RS25405 PF07719 Tetratricopeptide repeat CJ259_RS25405 PF07219 HemY protein N-terminus CJ259_RS25430 PF00324 Amino acid permease CJ259_RS25435 PF03808 Glycosyl transferase WecB/TagA/CpsF family CJ259_RS25440 PF06899 WzyE protein, O-antigen assembly polymerase CJ259_RS25445 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CJ259_RS25450 PF01943 Polysaccharide biosynthesis protein CJ259_RS25455 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CJ259_RS25465 PF00483 Nucleotidyl transferase CJ259_RS25470 PF16363 GDP-mannose 4,6 dehydratase CJ259_RS25475 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CJ259_RS25475 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CJ259_RS25475 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CJ259_RS25480 PF02350 UDP-N-acetylglucosamine 2-epimerase CJ259_RS25485 PF02706 Chain length determinant protein CJ259_RS25490 PF00953 Glycosyl transferase family 4 CJ259_RS25495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJ259_RS25495 PF07498 Rho termination factor, N-terminal domain CJ259_RS25495 PF07497 Rho termination factor, RNA-binding domain CJ259_RS25505 PF00085 Thioredoxin CJ259_RS25510 PF00271 Helicase conserved C-terminal domain CJ259_RS25510 PF00270 DEAD/DEAH box helicase CJ259_RS25520 PF02541 Ppx/GppA phosphatase family CJ259_RS25525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS25525 PF03466 LysR substrate binding domain CJ259_RS25535 PF04474 Protein of unknown function (DUF554) CJ259_RS25540 PF00580 UvrD/REP helicase N-terminal domain CJ259_RS25540 PF13361 UvrD-like helicase C-terminal domain CJ259_RS25555 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CJ259_RS25555 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CJ259_RS25560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS25560 PF03466 LysR substrate binding domain CJ259_RS25565 PF00291 Pyridoxal-phosphate dependent enzyme CJ259_RS25565 PF00585 C-terminal regulatory domain of Threonine dehydratase CJ259_RS25570 PF00920 Dehydratase family CJ259_RS25575 PF01063 Amino-transferase class IV CJ259_RS25585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJ259_RS25585 PF00205 Thiamine pyrophosphate enzyme, central domain CJ259_RS25585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJ259_RS25590 PF08046 IlvGEDA operon leader peptide CJ259_RS25595 PF01078 Magnesium chelatase, subunit ChlI CJ259_RS25595 PF13335 Magnesium chelatase, subunit ChlI C-terminal CJ259_RS25600 PF04219 Protein of unknown function, DUF CJ259_RS25605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS25605 PF03466 LysR substrate binding domain CJ259_RS25645 PF01177 Asp/Glu/Hydantoin racemase CJ259_RS25650 PF00593 TonB dependent receptor CJ259_RS25650 PF07715 TonB-dependent Receptor Plug Domain CJ259_RS25655 PF05958 tRNA (Uracil-5-)-methyltransferase CJ259_RS25660 PF07226 Protein of unknown function (DUF1422) CJ259_RS25665 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS25670 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ259_RS25670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJ259_RS25675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS25675 PF03466 LysR substrate binding domain CJ259_RS25685 PF14698 Argininosuccinate lyase C-terminal CJ259_RS25685 PF00206 Lyase CJ259_RS25695 PF00696 Amino acid kinase family CJ259_RS25700 PF02774 Semialdehyde dehydrogenase, dimerisation domain CJ259_RS25700 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJ259_RS25705 PF01546 Peptidase family M20/M25/M40 CJ259_RS25705 PF07687 Peptidase dimerisation domain CJ259_RS25710 PF00311 Phosphoenolpyruvate carboxylase CJ259_RS25715 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CJ259_RS25720 PF12833 Helix-turn-helix domain CJ259_RS25725 PF00923 Transaldolase/Fructose-6-phosphate aldolase CJ259_RS25730 PF00465 Iron-containing alcohol dehydrogenase CJ259_RS25735 PF00892 EamA-like transporter family CJ259_RS25740 PF02219 Methylenetetrahydrofolate reductase CJ259_RS25745 PF03466 LysR substrate binding domain CJ259_RS25745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS25750 PF02627 Carboxymuconolactone decarboxylase family CJ259_RS25755 PF00149 Calcineurin-like phosphoesterase CJ259_RS25755 PF02872 5'-nucleotidase, C-terminal domain CJ259_RS25765 PF03447 Homoserine dehydrogenase, NAD binding domain CJ259_RS25765 PF00742 Homoserine dehydrogenase CJ259_RS25765 PF00696 Amino acid kinase family CJ259_RS25770 PF01053 Cys/Met metabolism PLP-dependent enzyme CJ259_RS25775 PF01340 Met Apo-repressor, MetJ CJ259_RS25780 PF01197 Ribosomal protein L31 CJ259_RS25785 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CJ259_RS25785 PF18074 Primosomal protein N C-terminal domain CJ259_RS25785 PF17764 3′ DNA-binding domain (3′BD) CJ259_RS25785 PF00271 Helicase conserved C-terminal domain CJ259_RS25785 PF00270 DEAD/DEAH box helicase CJ259_RS25790 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS25795 PF05036 Sporulation related domain CJ259_RS25800 PF00227 Proteasome subunit CJ259_RS25805 PF07724 AAA domain (Cdc48 subfamily) CJ259_RS25805 PF00004 ATPase family associated with various cellular activities (AAA) CJ259_RS25805 PF10431 C-terminal, D2-small domain, of ClpB protein CJ259_RS25810 PF01040 UbiA prenyltransferase family CJ259_RS25815 PF03737 Aldolase/RraA CJ259_RS25820 PF00365 Phosphofructokinase CJ259_RS25825 PF16916 Dimerisation domain of Zinc Transporter CJ259_RS25825 PF01545 Cation efflux family CJ259_RS25830 PF07813 LTXXQ motif family protein CJ259_RS25835 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS25835 PF00072 Response regulator receiver domain CJ259_RS25840 PF16527 Two-component sensor protein CpxA, periplasmic domain CJ259_RS25840 PF00672 HAMP domain CJ259_RS25840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS25840 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS25845 PF03475 3-alpha domain CJ259_RS25845 PF03473 MOSC domain CJ259_RS25850 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CJ259_RS25850 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CJ259_RS25855 PF06379 L-rhamnose-proton symport protein (RhaT) CJ259_RS25860 PF12833 Helix-turn-helix domain CJ259_RS25860 PF02311 AraC-like ligand binding domain CJ259_RS25865 PF02311 AraC-like ligand binding domain CJ259_RS25865 PF12833 Helix-turn-helix domain CJ259_RS25875 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJ259_RS25875 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJ259_RS25880 PF06134 L-rhamnose isomerase (RhaA) CJ259_RS25885 PF00596 Class II Aldolase and Adducin N-terminal domain CJ259_RS25890 PF13407 Periplasmic binding protein domain CJ259_RS25895 PF00005 ABC transporter CJ259_RS25900 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS25905 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS25910 PF00465 Iron-containing alcohol dehydrogenase CJ259_RS25915 PF05336 L-rhamnose mutarotase CJ259_RS25920 PF01306 LacY proton/sugar symporter CJ259_RS25925 PF16874 Glycosyl hydrolase family 36 C-terminal domain CJ259_RS25925 PF16875 Glycosyl hydrolase family 36 N-terminal domain CJ259_RS25930 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CJ259_RS25930 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS25955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJ259_RS25965 PF01116 Fructose-bisphosphate aldolase class-II CJ259_RS25970 PF03611 PTS system sugar-specific permease component CJ259_RS25980 PF00365 Phosphofructokinase CJ259_RS25990 PF02634 FdhD/NarQ family CJ259_RS25995 PF00384 Molybdopterin oxidoreductase CJ259_RS25995 PF01568 Molydopterin dinucleotide binding domain CJ259_RS25995 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJ259_RS26000 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJ259_RS26000 PF00384 Molybdopterin oxidoreductase CJ259_RS26000 PF01568 Molydopterin dinucleotide binding domain CJ259_RS26005 PF13247 4Fe-4S dicluster domain CJ259_RS26005 PF09163 Formate dehydrogenase N, transmembrane CJ259_RS26010 PF01292 Prokaryotic cytochrome b561 CJ259_RS26015 PF04216 Protein involved in formate dehydrogenase formation CJ259_RS26030 PF07859 alpha/beta hydrolase fold CJ259_RS26035 PF09500 Putative thioesterase (yiiD_Cterm) CJ259_RS26035 PF00583 Acetyltransferase (GNAT) family CJ259_RS26040 PF02580 D-Tyr-tRNA(Tyr) deacylase CJ259_RS26045 PF03631 Virulence factor BrkB CJ259_RS26050 PF13419 Haloacid dehalogenase-like hydrolase CJ259_RS26055 PF00679 Elongation factor G C-terminus CJ259_RS26055 PF00009 Elongation factor Tu GTP binding domain CJ259_RS26055 PF03144 Elongation factor Tu domain 2 CJ259_RS26065 PF03951 Glutamine synthetase, beta-Grasp domain CJ259_RS26065 PF00120 Glutamine synthetase, catalytic domain CJ259_RS26070 PF00989 PAS fold CJ259_RS26070 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS26070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS26075 PF00158 Sigma-54 interaction domain CJ259_RS26075 PF00072 Response regulator receiver domain CJ259_RS26075 PF02954 Bacterial regulatory protein, Fis family CJ259_RS26080 PF06969 HemN C-terminal domain CJ259_RS26080 PF04055 Radical SAM superfamily CJ259_RS26090 PF04220 Der GTPase activator (YihI) CJ259_RS26095 PF01926 50S ribosome-binding GTPase CJ259_RS26100 PF01367 5'-3' exonuclease, C-terminal SAM fold CJ259_RS26100 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CJ259_RS26100 PF00476 DNA polymerase family A CJ259_RS26100 PF01612 3'-5' exonuclease CJ259_RS26110 PF01553 Acyltransferase CJ259_RS26115 PF01323 DSBA-like thioredoxin domain CJ259_RS26120 PF01636 Phosphotransferase enzyme family CJ259_RS26125 PF06288 Protein of unknown function (DUF1040) CJ259_RS26130 PF12804 MobA-like NTP transferase domain CJ259_RS26135 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CJ259_RS26170 PF07729 FCD domain CJ259_RS26170 PF00392 Bacterial regulatory proteins, gntR family CJ259_RS26175 PF07690 Major Facilitator Superfamily CJ259_RS26180 PF00356 Bacterial regulatory proteins, lacI family CJ259_RS26185 PF00294 pfkB family carbohydrate kinase CJ259_RS26190 PF13407 Periplasmic binding protein domain CJ259_RS26195 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS26200 PF00005 ABC transporter CJ259_RS26205 PF05025 RbsD / FucU transport protein family CJ259_RS26210 PF02705 K+ potassium transporter CJ259_RS26215 PF17868 AAA lid domain CJ259_RS26215 PF12592 Protein of unknown function (DUF3763) CJ259_RS26215 PF07728 AAA domain (dynein-related subfamily) CJ259_RS26220 PF05762 VWA domain containing CoxE-like protein CJ259_RS26225 PF03590 Aspartate-ammonia ligase CJ259_RS26230 PF01037 Lrp/AsnC ligand binding domain CJ259_RS26235 PF00258 Flavodoxin CJ259_RS26240 PF01134 Glucose inhibited division protein A CJ259_RS26240 PF13932 GidA associated domain CJ259_RS26245 PF02527 rRNA small subunit methyltransferase G CJ259_RS26250 PF03899 ATP synthase I chain CJ259_RS26255 PF00119 ATP synthase A chain CJ259_RS26260 PF00137 ATP synthase subunit C CJ259_RS26265 PF00430 ATP synthase B/B' CF(0) CJ259_RS26270 PF00213 ATP synthase delta (OSCP) subunit CJ259_RS26275 PF00306 ATP synthase alpha/beta chain, C terminal domain CJ259_RS26275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJ259_RS26275 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJ259_RS26280 PF00231 ATP synthase CJ259_RS26285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJ259_RS26285 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJ259_RS26290 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CJ259_RS26290 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CJ259_RS26295 PF00132 Bacterial transferase hexapeptide (six repeats) CJ259_RS26295 PF12804 MobA-like NTP transferase domain CJ259_RS26300 PF01380 SIS domain CJ259_RS26305 PF12849 PBP superfamily domain CJ259_RS26310 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS26315 PF00528 Binding-protein-dependent transport system inner membrane component CJ259_RS26320 PF00005 ABC transporter CJ259_RS26325 PF01895 PhoU domain CJ259_RS26335 PF02264 LamB porin CJ259_RS26335 PF11471 Maltoporin periplasmic N-terminal extension CJ259_RS26340 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CJ259_RS26340 PF00756 Putative esterase CJ259_RS26345 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CJ259_RS26350 PF13419 Haloacid dehalogenase-like hydrolase CJ259_RS26360 PF00860 Permease family CJ259_RS26365 PF03358 NADPH-dependent FMN reductase CJ259_RS26375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJ259_RS26375 PF03466 LysR substrate binding domain CJ259_RS26380 PF07690 Major Facilitator Superfamily CJ259_RS26390 PF10396 GTP-binding protein TrmE N-terminus CJ259_RS26390 PF12631 MnmE helical domain CJ259_RS26390 PF01926 50S ribosome-binding GTPase CJ259_RS26395 PF02096 60Kd inner membrane protein CJ259_RS26395 PF14849 YidC periplasmic domain CJ259_RS26400 PF01809 Putative membrane protein insertion efficiency factor CJ259_RS26405 PF00825 Ribonuclease P CJ259_RS26410 PF00468 Ribosomal protein L34 CJ259_RS26420 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS26420 PF00072 Response regulator receiver domain CJ259_RS26425 PF00672 HAMP domain CJ259_RS26425 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS26425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS26445 PF00230 Major intrinsic protein CJ259_RS26460 PF03358 NADPH-dependent FMN reductase CJ259_RS26485 PF03960 ArsC family CJ259_RS26490 PF02040 Arsenical pump membrane protein CJ259_RS26495 PF02374 Anion-transporting ATPase CJ259_RS26500 PF06953 Arsenical resistance operon trans-acting repressor ArsD CJ259_RS26505 PF01022 Bacterial regulatory protein, arsR family CJ259_RS26530 PF05321 Haemolysin expression modulating protein CJ259_RS26570 PF01435 Peptidase family M48 CJ259_RS26590 PF10431 C-terminal, D2-small domain, of ClpB protein CJ259_RS26590 PF02861 Clp amino terminal domain, pathogenicity island component CJ259_RS26590 PF00004 ATPase family associated with various cellular activities (AAA) CJ259_RS26590 PF17871 AAA lid domain CJ259_RS26590 PF07724 AAA domain (Cdc48 subfamily) CJ259_RS26595 PF00011 Hsp20/alpha crystallin family CJ259_RS26600 PF12728 Helix-turn-helix domain CJ259_RS26620 PF00795 Carbon-nitrogen hydrolase CJ259_RS26625 PF00005 ABC transporter CJ259_RS26630 PF00005 ABC transporter CJ259_RS26630 PF12399 Branched-chain amino acid ATP-binding cassette transporter CJ259_RS26635 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS26640 PF02653 Branched-chain amino acid transport system / permease component CJ259_RS26640 PF11862 Domain of unknown function (DUF3382) CJ259_RS26645 PF13458 Periplasmic binding protein CJ259_RS26650 PF18415 Histidine kinase receptor ArcB trans-membrane domain CJ259_RS26650 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS26650 PF01627 Hpt domain CJ259_RS26650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS26650 PF00989 PAS fold CJ259_RS26650 PF00072 Response regulator receiver domain CJ259_RS26655 PF00072 Response regulator receiver domain CJ259_RS26655 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS26670 PF13737 Transposase DDE domain CJ259_RS26675 PF01548 Transposase CJ259_RS26675 PF02371 Transposase IS116/IS110/IS902 family CJ259_RS26690 PF00809 Pterin binding enzyme CJ259_RS26695 PF01636 Phosphotransferase enzyme family CJ259_RS26700 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase CJ259_RS26705 PF13610 DDE domain CJ259_RS26730 PF13610 DDE domain CJ259_RS26740 PF00589 Phage integrase family CJ259_RS26740 PF13495 Phage integrase, N-terminal SAM-like domain CJ259_RS26745 PF00186 Dihydrofolate reductase CJ259_RS26760 PF13610 DDE domain CJ259_RS26775 PF09019 EcoRII C terminal CJ259_RS26775 PF09217 Restriction endonuclease EcoRII, N-terminal CJ259_RS26780 PF00145 C-5 cytosine-specific DNA methylase CJ259_RS26780 PF18284 DNA methylase N-terminal domain CJ259_RS26795 PF13610 DDE domain CJ259_RS26810 PF00440 Bacterial regulatory proteins, tetR family CJ259_RS26810 PF02909 Tetracyclin repressor-like, C-terminal domain CJ259_RS26815 PF07690 Major Facilitator Superfamily CJ259_RS26820 PF00892 EamA-like transporter family CJ259_RS26835 PF02796 Helix-turn-helix domain of resolvase CJ259_RS26835 PF00239 Resolvase, N terminal domain CJ259_RS26840 PF13700 Domain of unknown function (DUF4158) CJ259_RS26840 PF01526 Tn3 transposase DDE domain CJ259_RS26855 PF13599 Pentapeptide repeats (9 copies) CJ259_RS26865 PF13610 DDE domain CJ259_RS26880 PF00990 Diguanylate cyclase, GGDEF domain CJ259_RS26880 PF13188 PAS domain CJ259_RS26880 PF03707 Bacterial signalling protein N terminal repeat CJ259_RS26880 PF00563 EAL domain CJ259_RS26885 PF05052 MerE protein CJ259_RS26890 PF13411 MerR HTH family regulatory protein CJ259_RS26895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJ259_RS26895 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJ259_RS26895 PF00403 Heavy-metal-associated domain CJ259_RS26900 PF03203 MerC mercury resistance protein CJ259_RS26905 PF00403 Heavy-metal-associated domain CJ259_RS26915 PF02463 RecF/RecN/SMC N terminal domain CJ259_RS26920 PF01850 PIN domain CJ259_RS26925 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CJ259_RS26960 PF00589 Phage integrase family CJ259_RS26990 PF02384 N-6 DNA Methylase CJ259_RS27010 PF08775 ParB family CJ259_RS27010 PF02195 ParB-like nuclease domain CJ259_RS27015 PF13614 AAA domain CJ259_RS27015 PF18607 ParA helix turn helix domain CJ259_RS27020 PF01051 Initiator Replication protein CJ259_RS27025 PF13438 Domain of unknown function (DUF4113) CJ259_RS27025 PF00817 impB/mucB/samB family CJ259_RS27025 PF11799 impB/mucB/samB family C-terminal domain CJ259_RS27030 PF00717 Peptidase S24-like CJ259_RS27035 PF06406 StbA protein CJ259_RS27055 PF01555 DNA methylase CJ259_RS27065 PF07128 Protein of unknown function (DUF1380) CJ259_RS27075 PF03230 Antirestriction protein CJ259_RS27090 PF06440 DNA polymerase III, theta subunit CJ259_RS27140 PF00436 Single-strand binding protein family CJ259_RS27145 PF06006 Bacterial protein of unknown function (DUF905) CJ259_RS27150 PF02195 ParB-like nuclease domain CJ259_RS27155 PF06290 Plasmid SOS inhibition protein (PsiB) CJ259_RS27185 PF01848 Hok/gef family CJ259_RS27235 PF01381 Helix-turn-helix CJ259_RS27275 PF06067 Domain of unknown function (DUF932) CJ259_RS27285 PF01464 Transglycosylase SLT domain CJ259_RS27290 PF05261 TraM protein, DNA-binding CJ259_RS27300 PF05509 TraY domain CJ259_RS27305 PF05513 TraA CJ259_RS27310 PF07178 TraL protein CJ259_RS27315 PF05309 TraE protein CJ259_RS27320 PF06586 TraK protein CJ259_RS27325 PF03743 Bacterial conjugation TrbI-like protein CJ259_RS27330 PF09676 Type IV conjugative transfer system lipoprotein (TraV) CJ259_RS27365 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer CJ259_RS27370 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) CJ259_RS27375 PF12477 Sex factor F TraW protein N terminal CJ259_RS27385 PF06834 TraU protein CJ259_RS27390 PF09673 Type-F conjugative transfer system pilin assembly protein CJ259_RS27395 PF06986 Type-1V conjugative transfer system mating pair stabilisation CJ259_RS27400 PF11100 Conjugal transfer protein TrbE CJ259_RS27415 PF13728 F plasmid transfer operon protein CJ259_RS27420 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) CJ259_RS27425 PF13728 F plasmid transfer operon protein CJ259_RS27435 PF06122 Conjugative relaxosome accessory transposon protein CJ259_RS27440 PF07916 TraG-like protein, N-terminal region CJ259_RS27450 PF05818 Enterobacterial TraT complement resistance protein CJ259_RS27460 PF10412 Type IV secretion-system coupling protein DNA-binding domain CJ259_RS27460 PF12615 F sex factor protein N terminal CJ259_RS27465 PF08751 TrwC relaxase CJ259_RS27465 PF18272 single-stranded DNA binding TraI N-terminal subdomain CJ259_RS27465 PF18340 DNA relaxase TraI 2B/2B-like domain CJ259_RS27465 PF07057 DNA helicase TraI CJ259_RS27470 PF05857 TraX protein CJ259_RS27475 PF04352 ProQ/FINO family CJ259_RS27475 PF12602 Fertility inhibition protein N terminal CJ259_RS27505 PF10723 Replication regulatory protein RepB CJ259_RS27515 PF02387 IncFII RepA protein family CJ259_RS27545 PF02899 Phage integrase, N-terminal SAM-like domain CJ259_RS27545 PF00589 Phage integrase family CJ259_RS27555 PF00665 Integrase core domain CJ259_RS27555 PF02796 Helix-turn-helix domain of resolvase CJ259_RS27560 PF01695 IstB-like ATP binding protein CJ259_RS27580 PF13808 DDE_Tnp_1-associated CJ259_RS27580 PF01609 Transposase DDE domain CJ259_RS27600 PF00239 Resolvase, N terminal domain CJ259_RS27600 PF02796 Helix-turn-helix domain of resolvase CJ259_RS27605 PF13700 Domain of unknown function (DUF4158) CJ259_RS27605 PF01526 Tn3 transposase DDE domain CJ259_RS27610 PF13610 DDE domain CJ259_RS27675 PF03230 Antirestriction protein CJ259_RS27690 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CJ259_RS27700 PF00717 Peptidase S24-like CJ259_RS27705 PF13438 Domain of unknown function (DUF4113) CJ259_RS27705 PF11799 impB/mucB/samB family C-terminal domain CJ259_RS27705 PF00817 impB/mucB/samB family CJ259_RS27745 PF02195 ParB-like nuclease domain CJ259_RS27745 PF18090 Centromere-binding protein HTH domain CJ259_RS27750 PF13614 AAA domain CJ259_RS27755 PF01051 Initiator Replication protein CJ259_RS27760 PF00589 Phage integrase family CJ259_RS27765 PF00990 Diguanylate cyclase, GGDEF domain CJ259_RS27765 PF13185 GAF domain CJ259_RS27770 PF00990 Diguanylate cyclase, GGDEF domain CJ259_RS27770 PF00498 FHA domain CJ259_RS27770 PF00563 EAL domain CJ259_RS27780 PF13737 Transposase DDE domain CJ259_RS27790 PF00563 EAL domain CJ259_RS27790 PF12792 CSS motif domain associated with EAL CJ259_RS27795 PF10011 Predicted membrane protein (DUF2254) CJ259_RS27800 PF02028 BCCT, betaine/carnitine/choline family transporter CJ259_RS27835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJ259_RS27835 PF00672 HAMP domain CJ259_RS27835 PF00512 His Kinase A (phospho-acceptor) domain CJ259_RS27840 PF00072 Response regulator receiver domain CJ259_RS27840 PF00486 Transcriptional regulatory protein, C terminal CJ259_RS27845 PF02321 Outer membrane efflux protein CJ259_RS27850 PF11604 Copper binding periplasmic protein CusF CJ259_RS27855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJ259_RS27860 PF00873 AcrB/AcrD/AcrF family CJ259_RS27870 PF04945 YHS domain CJ259_RS27880 PF08525 Opacity-associated protein A N-terminal motif CJ259_RS27880 PF01476 LysM domain CJ259_RS27880 PF01551 Peptidase family M23 CJ259_RS27890 PF00394 Multicopper oxidase CJ259_RS27890 PF07732 Multicopper oxidase CJ259_RS27890 PF07731 Multicopper oxidase CJ259_RS27895 PF05275 Copper resistance protein B precursor (CopB) CJ259_RS27900 PF04234 CopC domain CJ259_RS27905 PF05425 Copper resistance protein D