locus-tag	class	description
CJ259_RS00020	COG0187	DNA topoisomerase II activity
CJ259_RS00025	COG0561	phosphatase activity
CJ259_RS00040	COG2186	Transcriptional regulator
CJ259_RS00045	COG3734	2-keto-3-deoxy-galactonokinase
CJ259_RS00050	COG0800	Aldolase
CJ259_RS00060	COG2271	Major facilitator Superfamily
CJ259_RS00065	COG0823	Involved in the tonB-independent uptake of proteins
CJ259_RS00070	COG5645	(Lipo)protein
CJ259_RS00095	COG2188	Transcriptional regulator
CJ259_RS00110	COG2149	membrane
CJ259_RS00130	COG2610	gluconate transmembrane transporter activity
CJ259_RS00135	COG0583	DNA-binding transcription factor activity
CJ259_RS00140	COG2814	Major facilitator Superfamily
CJ259_RS00165	COG0028	Belongs to the TPP enzyme family
CJ259_RS00170	COG0440	acetolactate synthase activity
CJ259_RS00175	COG2197	response regulator
CJ259_RS00185	COG2271	Major facilitator Superfamily
CJ259_RS00230	COG2188	Transcriptional regulator
CJ259_RS00255	COG4580	involved in the transport of maltose and maltodextrins
CJ259_RS00260	COG1447	Phosphotransferase system cellobiose-specific component IIA
CJ259_RS00265	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CJ259_RS00265	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CJ259_RS00275	COG1609	Transcriptional regulator
CJ259_RS00285	COG3384	dioxygenase
CJ259_RS00290	COG0583	DNA-binding transcription factor activity
CJ259_RS00295	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CJ259_RS00300	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CJ259_RS00305	COG2828	Protein conserved in bacteria
CJ259_RS00320	COG0697	spore germination
CJ259_RS00325	COG1263	PTS System
CJ259_RS00325	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CJ259_RS00335	COG2814	Major facilitator Superfamily
CJ259_RS00345	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CJ259_RS00385	COG0583	DNA-binding transcription factor activity
CJ259_RS00410	COG1464	Belongs to the NlpA lipoprotein family
CJ259_RS00425	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
CJ259_RS00435	COG1064	alcohol dehydrogenase
CJ259_RS00470	COG2211	Major facilitator Superfamily
CJ259_RS00475	COG1501	Belongs to the glycosyl hydrolase 31 family
CJ259_RS00485	COG1486	melibiose metabolic process
CJ259_RS00490	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CJ259_RS00490	COG1263	PTS System
CJ259_RS00495	COG2982	Protein involved in outer membrane biogenesis
CJ259_RS00500	COG2233	PERMEase
CJ259_RS00505	COG0786	glutamate:sodium symporter activity
CJ259_RS00525	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CJ259_RS00550	COG3152	Membrane
CJ259_RS00560	COG1494	fructose-1,6-bisphosphatase
CJ259_RS00565	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CJ259_RS00570	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CJ259_RS00575	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CJ259_RS00595	COG2860	membrane
CJ259_RS00605	COG2169	Transcriptional regulator
CJ259_RS00605	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CJ259_RS00625	COG1561	YicC-like family, N-terminal region
CJ259_RS00645	COG1131	(ABC) transporter
CJ259_RS00650	COG0842	Transport permease protein
CJ259_RS00675	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CJ259_RS00710	COG1519	Transferase
CJ259_RS00715	COG1216	Glycosyl transferase, family 2
CJ259_RS00720	COG0438	transferase activity, transferring glycosyl groups
CJ259_RS00730	COG0859	PFAM glycosyl transferase family 9
CJ259_RS00755	COG0859	PFAM glycosyl transferase family 9
CJ259_RS00770	COG0156	8-amino-7-oxononanoate synthase activity
CJ259_RS00780	COG0463	Glycosyl transferase, family 2
CJ259_RS00785	COG2861	carbohydrate metabolic process
CJ259_RS00790	COG4942	peptidase
CJ259_RS00800	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CJ259_RS00805	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CJ259_RS00825	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CJ259_RS00835	COG2186	Transcriptional regulator
CJ259_RS00855	COG3722	fumarate hydratase activity
CJ259_RS00875	COG1566	PFAM secretion protein HlyD family protein
CJ259_RS00880	COG0625	glutathione transferase activity
CJ259_RS00890	COG3276	selenocysteine insertion sequence binding
CJ259_RS00895	COG1414	Transcriptional regulator
CJ259_RS00900	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CJ259_RS00905	COG3977	Valine--pyruvate aminotransferase
CJ259_RS00910	COG0366	Alpha amylase catalytic
CJ259_RS00920	COG2992	FlgJ-related protein
CJ259_RS00925	COG1609	Transcriptional regulator
CJ259_RS00925	COG2207	Transcriptional regulator
CJ259_RS00930	COG4214	carbohydrate transport
CJ259_RS00940	COG4213	ABC transporter substrate-binding protein
CJ259_RS00960	COG4682	membrane
CJ259_RS00965	COG4682	membrane
CJ259_RS00970	COG3274	enterobacterial common antigen metabolic process
CJ259_RS01005	COG1278	Cold shock
CJ259_RS01010	COG2944	sequence-specific DNA binding
CJ259_RS01015	COG2814	Major facilitator Superfamily
CJ259_RS01040	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CJ259_RS01050	COG1609	Transcriptional regulator
CJ259_RS01055	COG2885	chlorophyll binding
CJ259_RS01060	COG0243	molybdopterin cofactor binding
CJ259_RS01065	COG0456	acetyltransferase
CJ259_RS01070	COG2818	Glycosylase
CJ259_RS01075	COG5571	outer membrane autotransporter
CJ259_RS01080	COG2223	nitrite transmembrane transporter activity
CJ259_RS01120	COG0747	negative chemotaxis
CJ259_RS01125	COG0601	transmembrane transport
CJ259_RS01130	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CJ259_RS01135	COG0444	Belongs to the ABC transporter superfamily
CJ259_RS01140	COG4608	Belongs to the ABC transporter superfamily
CJ259_RS01155	COG2894	cell division
CJ259_RS01165	COG1215	transferase activity, transferring glycosyl groups
CJ259_RS01170	COG0457	Tetratricopeptide repeat
CJ259_RS01185	COG2194	sulfuric ester hydrolase activity
CJ259_RS01215	COG1215	transferase activity, transferring glycosyl groups
CJ259_RS01220	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CJ259_RS01225	COG3118	belongs to the thioredoxin family
CJ259_RS01225	COG0457	Tetratricopeptide repeat
CJ259_RS01230	COG2199	diguanylate cyclase activity
CJ259_RS01230	COG2200	EAL domain
CJ259_RS01240	COG0612	Peptidase, M16
CJ259_RS01255	COG2982	Protein involved in outer membrane biogenesis
CJ259_RS01260	COG0477	Major facilitator Superfamily
CJ259_RS01270	COG1295	ribonuclease BN
CJ259_RS01275	COG0583	DNA-binding transcription factor activity
CJ259_RS01280	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS01285	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJ259_RS01295	COG1454	alcohol dehydrogenase
CJ259_RS01305	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CJ259_RS01310	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CJ259_RS01315	COG0671	phosphoesterase, PA-phosphatase related
CJ259_RS01335	COG0589	response to stress
CJ259_RS01345	COG0306	phosphate transporter
CJ259_RS01350	COG2081	HI0933 family
CJ259_RS01355	COG2239	Acts as a magnesium transporter
CJ259_RS01365	COG1124	(ABC) transporter
CJ259_RS01375	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CJ259_RS01380	COG0601	transmembrane transport
CJ259_RS01385	COG0747	negative chemotaxis
CJ259_RS01400	COG3479	Phenolic acid decarboxylase
CJ259_RS01440	COG0628	permease
CJ259_RS01445	COG0477	Major facilitator Superfamily
CJ259_RS01455	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CJ259_RS01470	COG3714	YhhN family
CJ259_RS01480	COG3776	membrane
CJ259_RS01485	COG0742	ribosomal rna small subunit methyltransferase
CJ259_RS01490	COG0552	protein localization to endoplasmic reticulum
CJ259_RS01495	COG2884	Cell division ATP-binding protein ftsE
CJ259_RS01500	COG2177	Part of the ABC transporter FtsEX involved in
CJ259_RS01515	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CJ259_RS01525	COG0683	leucine binding
CJ259_RS01540	COG0683	leucine binding
CJ259_RS01545	COG0559	Belongs to the binding-protein-dependent transport system permease family
CJ259_RS01595	COG0584	glycerophosphoryl diester phosphodiesterase
CJ259_RS01605	COG0405	Gamma-glutamyltransferase
CJ259_RS01610	COG1247	-acetyltransferase
CJ259_RS01620	COG0673	inositol 2-dehydrogenase activity
CJ259_RS01625	COG1741	Belongs to the pirin family
CJ259_RS01630	COG1609	Transcriptional regulator
CJ259_RS01635	COG3265	gluconokinase activity
CJ259_RS01640	COG2610	gluconate transmembrane transporter activity
CJ259_RS01650	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CJ259_RS01675	COG0058	SHG alpha-glucan phosphorylase activity
CJ259_RS01690	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CJ259_RS01705	COG1349	DNA-binding transcription factor activity
CJ259_RS01720	COG0058	SHG alpha-glucan phosphorylase activity
CJ259_RS01725	COG1640	4-alpha-glucanotransferase
CJ259_RS01730	COG2610	gluconate transmembrane transporter activity
CJ259_RS01740	COG1040	competence protein
CJ259_RS01765	COG1918	ferrous iron import across plasma membrane
CJ259_RS01770	COG2183	response to ionizing radiation
CJ259_RS01775	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CJ259_RS01800	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CJ259_RS01805	COG1011	Hydrolase
CJ259_RS01815	COG0494	nUDIX hydrolase
CJ259_RS01820	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CJ259_RS01845	COG4796	Type ii and iii secretion system protein
CJ259_RS01865	COG3266	domain, Protein
CJ259_RS01870	COG0338	D12 class N6 adenine-specific DNA methyltransferase
CJ259_RS01875	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CJ259_RS01900	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CJ259_RS01905	COG0402	S-adenosylhomocysteine deaminase activity
CJ259_RS01910	COG0738	Major facilitator superfamily
CJ259_RS01935	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CJ259_RS01940	COG1289	transmembrane transporter activity
CJ259_RS01955	COG1765	OsmC-like protein
CJ259_RS01960	COG3954	Phosphoribulokinase
CJ259_RS01970	COG0429	hydrolase of the alpha beta-hydrolase fold
CJ259_RS01980	COG0488	(ABC) transporter
CJ259_RS01995	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
CJ259_RS02000	COG1047	Peptidyl-prolyl cis-trans
CJ259_RS02010	COG0545	Peptidyl-prolyl cis-trans isomerase
CJ259_RS02015	COG2964	Protein conserved in bacteria
CJ259_RS02070	COG0051	transcription antitermination factor activity, RNA binding
CJ259_RS02095	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CJ259_RS02110	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CJ259_RS02175	COG0201	protein transport
CJ259_RS02200	COG0202	RNA polymerase activity
CJ259_RS02215	COG0789	Transcriptional regulator
CJ259_RS02220	COG3036	rescue of stalled ribosome
CJ259_RS02250	COG0758	DNA mediated transformation
CJ259_RS02260	COG0551	DNA topoisomerase type I activity
CJ259_RS02280	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CJ259_RS02325	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CJ259_RS02330	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CJ259_RS02335	COG1309	transcriptional regulator
CJ259_RS02340	COG0582	viral genome integration into host DNA
CJ259_RS02355	COG3561	AntA/AntB antirepressor
CJ259_RS02445	COG4626	Terminase
CJ259_RS02445	COG1802	Transcriptional regulator
CJ259_RS02475	COG4145	pantothenate transmembrane transporter activity
CJ259_RS02480	COG3924	membrane
CJ259_RS02485	COG0439	Biotin carboxylase
CJ259_RS02490	COG0511	ligase activity, forming carbon-carbon bonds
CJ259_RS02515	COG2200	EAL domain
CJ259_RS02515	COG2199	diguanylate cyclase activity
CJ259_RS02520	COG1077	Cell shape determining protein MreB Mrl
CJ259_RS02525	COG1792	Involved in formation and maintenance of cell shape
CJ259_RS02530	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
CJ259_RS02540	COG1530	ribonuclease E activity
CJ259_RS02545	COG3164	Protein of unknown function
CJ259_RS02550	COG0312	modulator of DNA gyrase
CJ259_RS02555	COG0583	DNA-binding transcription factor activity
CJ259_RS02570	COG1289	transmembrane transporter activity
CJ259_RS02575	COG2732	(Barnase) inhibitor
CJ259_RS02600	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CJ259_RS02605	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CJ259_RS02610	COG3105	Protein conserved in bacteria
CJ259_RS02615	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CJ259_RS02635	COG0625	glutathione transferase activity
CJ259_RS02640	COG2969	positive regulation of protein catabolic process
CJ259_RS02650	COG0493	'glutamate synthase
CJ259_RS02655	COG0070	glutamate synthase
CJ259_RS02655	COG0067	glutamate synthase
CJ259_RS02655	COG0069	glutamate synthase activity
CJ259_RS02660	COG1242	4 iron, 4 sulfur cluster binding
CJ259_RS02665	COG2271	Major facilitator Superfamily
CJ259_RS02670	COG1063	alcohol dehydrogenase
CJ259_RS02675	COG1312	Catalyzes the dehydration of D-mannonate
CJ259_RS02680	COG0784	Response regulator, receiver
CJ259_RS02680	COG2198	Histidine kinase
CJ259_RS02680	COG5002	protein histidine kinase activity
CJ259_RS02685	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
CJ259_RS02690	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CJ259_RS02695	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ259_RS02705	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ259_RS02710	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CJ259_RS02715	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CJ259_RS02720	COG1137	ATPase activity
CJ259_RS02725	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
CJ259_RS02730	COG3117	lipopolysaccharide transmembrane transporter activity
CJ259_RS02735	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CJ259_RS02745	COG0530	calcium, potassium:sodium antiporter activity
CJ259_RS02755	COG1127	ABC transporter
CJ259_RS02760	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CJ259_RS02765	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CJ259_RS02770	COG2854	intermembrane phospholipid transfer
CJ259_RS02775	COG3113	response to antibiotic
CJ259_RS02780	COG5007	Belongs to the BolA IbaG family
CJ259_RS02790	COG3423	Transcriptional regulator
CJ259_RS02795	COG0142	geranyltranstransferase activity
CJ259_RS02810	COG0697	spore germination
CJ259_RS02820	COG2027	D-alanyl-D-alanine carboxypeptidase
CJ259_RS02830	COG1534	Rna-binding protein
CJ259_RS02845	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CJ259_RS02850	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CJ259_RS02860	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CJ259_RS02900	COG0195	Participates in both transcription termination and antitermination
CJ259_RS02950	COG0814	amino acid
CJ259_RS02955	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CJ259_RS02960	COG0826	peptidase U32
CJ259_RS02965	COG0826	peptidase U32
CJ259_RS02970	COG3154	lipid carrier protein
CJ259_RS02975	COG3153	acetyltransferase
CJ259_RS02990	COG0693	protein deglycase activity
CJ259_RS02995	COG0702	epimerase
CJ259_RS03000	COG0701	Predicted permease
CJ259_RS03005	COG2823	Periplasmic or secreted lipoprotein
CJ259_RS03025	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CJ259_RS03040	COG1063	alcohol dehydrogenase
CJ259_RS03045	COG3775	system Galactitol-specific IIC component
CJ259_RS03050	COG3414	Phosphotransferase system galactitol-specific IIB component
CJ259_RS03055	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ259_RS03065	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ259_RS03065	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ259_RS03070	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CJ259_RS03070	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ259_RS03070	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CJ259_RS03075	COG1105	Belongs to the carbohydrate kinase PfkB family
CJ259_RS03085	COG1349	DNA-binding transcription factor activity
CJ259_RS03090	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CJ259_RS03095	COG2721	sulfolactate sulfo-lyase activity
CJ259_RS03100	COG2271	Major facilitator Superfamily
CJ259_RS03110	COG2084	Dehydrogenase
CJ259_RS03115	COG1929	Belongs to the glycerate kinase type-1 family
CJ259_RS03135	COG1741	Belongs to the pirin family
CJ259_RS03140	COG0583	DNA-binding transcription factor activity
CJ259_RS03145	COG3152	Membrane
CJ259_RS03150	COG0435	Glutathione S-transferase
CJ259_RS03155	COG2259	Doxx family
CJ259_RS03165	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
CJ259_RS03170	COG4575	ribosome binding
CJ259_RS03175	COG1422	Protein of unknown function (DUF1090)
CJ259_RS03185	COG0586	Pfam SNARE associated Golgi protein
CJ259_RS03190	COG2186	Transcriptional regulator
CJ259_RS03195	COG2271	Major facilitator Superfamily
CJ259_RS03205	COG2721	sulfolactate sulfo-lyase activity
CJ259_RS03220	COG0861	Integral membrane protein TerC family
CJ259_RS03225	COG0673	inositol 2-dehydrogenase activity
CJ259_RS03230	COG1451	nucleotide metabolic process
CJ259_RS03250	COG0446	pyridine nucleotide-disulphide oxidoreductase
CJ259_RS03250	COG1902	pentaerythritol trinitrate reductase activity
CJ259_RS03305	COG1695	Transcriptional regulator
CJ259_RS03310	COG2375	cellular response to nickel ion
CJ259_RS03325	COG1461	Dihydroxyacetone kinase
CJ259_RS03330	COG2376	Dihydroxyacetone kinase
CJ259_RS03405	COG3247	response to pH
CJ259_RS03415	COG2205	protein histidine kinase activity
CJ259_RS03415	COG2198	Histidine kinase
CJ259_RS03415	COG0784	Response regulator, receiver
CJ259_RS03415	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJ259_RS03420	COG2197	response regulator
CJ259_RS03435	COG0582	viral genome integration into host DNA
CJ259_RS03525	COG1802	Transcriptional regulator
CJ259_RS03525	COG4626	Terminase
CJ259_RS03545	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CJ259_RS03550	COG0358	DNA primase activity
CJ259_RS03555	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CJ259_RS03615	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CJ259_RS03630	COG4991	sh3 domain protein
CJ259_RS03635	COG3025	triphosphatase activity
CJ259_RS03655	COG2960	long-chain fatty acid transporting porin activity
CJ259_RS03670	COG3384	dioxygenase
CJ259_RS03675	COG0754	glutathionylspermidine amidase activity
CJ259_RS03690	COG0494	nUDIX hydrolase
CJ259_RS03695	COG3151	Protein conserved in bacteria
CJ259_RS03700	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CJ259_RS03705	COG3150	esterase
CJ259_RS03715	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
CJ259_RS03720	COG2249	NAD(P)H dehydrogenase (quinone) activity
CJ259_RS03725	COG0642	Histidine kinase
CJ259_RS03735	COG3111	PFAM Bacterial OB fold (BOF) protein
CJ259_RS03740	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
CJ259_RS03745	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CJ259_RS03750	COG0204	Acyl-transferase
CJ259_RS03755	COG2132	Multicopper oxidase
CJ259_RS03760	COG1032	radical SAM domain protein
CJ259_RS03770	COG0656	L-ascorbic acid biosynthetic process
CJ259_RS03775	COG1979	alcohol dehydrogenase
CJ259_RS03780	COG2207	Transcriptional regulator
CJ259_RS03785	COG0586	Pfam SNARE associated Golgi protein
CJ259_RS03790	COG0626	cystathionine gamma-synthase activity
CJ259_RS03805	COG0848	biopolymer transport protein
CJ259_RS03810	COG2211	Major facilitator Superfamily
CJ259_RS03835	COG0625	glutathione transferase activity
CJ259_RS03845	COG0754	glutathionylspermidine amidase activity
CJ259_RS03850	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJ259_RS03870	COG0583	DNA-binding transcription factor activity
CJ259_RS03875	COG0626	cystathionine gamma-synthase activity
CJ259_RS03890	COG1811	Na channel or pump
CJ259_RS03900	COG1982	Orn Lys Arg decarboxylase major
CJ259_RS03905	COG2211	Major facilitator Superfamily
CJ259_RS03920	COG1194	a g-specific adenine glycosylase
CJ259_RS03930	COG3171	Protein conserved in bacteria
CJ259_RS03940	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CJ259_RS03955	COG0762	integral membrane protein
CJ259_RS03960	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CJ259_RS03965	COG2805	Type II/IV secretion system protein
CJ259_RS03985	COG0189	ligase activity
CJ259_RS03990	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CJ259_RS03995	COG2356	endonuclease I
CJ259_RS04005	COG2814	Major facilitator Superfamily
CJ259_RS04045	COG2146	nitrite reductase [NAD(P)H] activity
CJ259_RS04060	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS04065	COG1414	Transcriptional regulator
CJ259_RS04095	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS04100	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
CJ259_RS04120	COG0501	Belongs to the peptidase M48B family
CJ259_RS04125	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CJ259_RS04140	COG0191	fructose-bisphosphate aldolase activity
CJ259_RS04145	COG0668	transmembrane transport
CJ259_RS04155	COG2968	Membrane
CJ259_RS04170	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CJ259_RS04175	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CJ259_RS04195	COG0006	proline dipeptidase activity
CJ259_RS04200	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CJ259_RS04205	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CJ259_RS04225	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS04230	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CJ259_RS04250	COG2723	6-phospho-beta-galactosidase activity
CJ259_RS04255	COG1737	Transcriptional regulator
CJ259_RS04265	COG1272	protein, Hemolysin III
CJ259_RS04275	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
CJ259_RS04285	COG0716	FMN binding
CJ259_RS04290	COG4974	Belongs to the 'phage' integrase family
CJ259_RS04300	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CJ259_RS04325	COG4942	peptidase
CJ259_RS04335	COG2814	Major facilitator Superfamily
CJ259_RS04350	COG0667	Aldo Keto reductase
CJ259_RS04390	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CJ259_RS04395	COG1393	Belongs to the ArsC family
CJ259_RS04410	COG1538	Outer membrane efflux protein
CJ259_RS04415	COG1289	transmembrane transporter activity
CJ259_RS04430	COG3592	Divergent 4Fe-4S mono-cluster
CJ259_RS04435	COG2388	GCN5-related N-acetyl-transferase
CJ259_RS04445	COG3539	Fimbrial protein
CJ259_RS04450	COG3539	Fimbrial protein
CJ259_RS04455	COG3539	Fimbrial protein
CJ259_RS04460	COG3188	usher protein
CJ259_RS04465	COG3121	Chaperone
CJ259_RS04470	COG3539	Fimbrial protein
CJ259_RS04480	COG4974	Belongs to the 'phage' integrase family
CJ259_RS04485	COG0582	viral genome integration into host DNA
CJ259_RS04495	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
CJ259_RS04500	COG1846	Transcriptional regulator
CJ259_RS04505	COG0697	spore germination
CJ259_RS04555	COG0667	Aldo Keto reductase
CJ259_RS04560	COG0814	amino acid
CJ259_RS04575	COG0183	Belongs to the thiolase family
CJ259_RS04585	COG0823	Involved in the tonB-independent uptake of proteins
CJ259_RS04590	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS04595	COG2814	Major facilitator Superfamily
CJ259_RS04625	COG3842	ATPase activity
CJ259_RS04630	COG0395	ABC-type sugar transport system, permease component
CJ259_RS04635	COG1175	transmembrane transport
CJ259_RS04640	COG1917	Cupin 2, conserved barrel domain protein
CJ259_RS04645	COG1794	racemase activity, acting on amino acids and derivatives
CJ259_RS04650	COG0583	DNA-binding transcription factor activity
CJ259_RS04660	COG1609	Transcriptional regulator
CJ259_RS04665	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CJ259_RS04670	COG2723	6-phospho-beta-galactosidase activity
CJ259_RS04675	COG2186	Transcriptional regulator
CJ259_RS04685	COG1609	Transcriptional regulator
CJ259_RS04710	COG0667	Aldo Keto reductase
CJ259_RS04720	COG0861	Integral membrane protein TerC family
CJ259_RS04750	COG2165	general secretion pathway protein
CJ259_RS04755	COG4795	General secretion pathway protein
CJ259_RS04765	COG4967	type IV pilus modification protein PilV
CJ259_RS04770	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
CJ259_RS04780	COG1074	ATP-dependent DNA helicase activity
CJ259_RS04785	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CJ259_RS04795	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CJ259_RS04795	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CJ259_RS04800	COG0860	N-Acetylmuramoyl-L-alanine amidase
CJ259_RS04805	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CJ259_RS04835	COG4656	Part of a membrane complex involved in electron transport
CJ259_RS04840	COG1012	belongs to the aldehyde dehydrogenase family
CJ259_RS04840	COG1454	alcohol dehydrogenase
CJ259_RS04870	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
CJ259_RS05090	COG2885	chlorophyll binding
CJ259_RS05125	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
CJ259_RS05130	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CJ259_RS05135	COG2166	iron-sulfur cluster assembly
CJ259_RS05140	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CJ259_RS05150	COG0583	DNA-binding transcription factor activity
CJ259_RS05155	COG2363	Small membrane protein
CJ259_RS05165	COG1349	DNA-binding transcription factor activity
CJ259_RS05185	COG0738	Major facilitator superfamily
CJ259_RS05190	COG0235	Class ii aldolase
CJ259_RS05195	COG1454	alcohol dehydrogenase
CJ259_RS05210	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CJ259_RS05225	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CJ259_RS05230	COG2011	ABC-type metal ion transport system permease component
CJ259_RS05235	COG1464	Belongs to the NlpA lipoprotein family
CJ259_RS05245	COG0477	Major facilitator Superfamily
CJ259_RS05255	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CJ259_RS05260	COG1760	l-serine dehydratase
CJ259_RS05265	COG0814	amino acid
CJ259_RS05270	COG1611	Belongs to the LOG family
CJ259_RS05285	COG3098	single-species biofilm formation
CJ259_RS05290	COG0564	pseudouridine synthase activity
CJ259_RS05295	COG0716	FMN binding
CJ259_RS05300	COG2271	Major facilitator Superfamily
CJ259_RS05305	COG4948	Mandelate Racemase Muconate Lactonizing
CJ259_RS05310	COG4948	Mandelate Racemase Muconate Lactonizing
CJ259_RS05315	COG1929	Belongs to the glycerate kinase type-1 family
CJ259_RS05320	COG3850	Histidine kinase
CJ259_RS05320	COG2205	protein histidine kinase activity
CJ259_RS05320	COG4999	Histidine kinase
CJ259_RS05320	COG3437	response regulator, receiver
CJ259_RS05330	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CJ259_RS05335	COG3956	TIGRFAM MazG family protein
CJ259_RS05355	COG0602	queuosine metabolic process
CJ259_RS05360	COG0720	synthase
CJ259_RS05380	COG2234	aminopeptidase activity
CJ259_RS05440	COG4942	peptidase
CJ259_RS05440	COG1388	LysM domain
CJ259_RS05445	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CJ259_RS05470	COG0163	prenyltransferase activity
CJ259_RS05475	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CJ259_RS05500	COG0582	viral genome integration into host DNA
CJ259_RS05545	COG5290	Psort location Cytoplasmic, score
CJ259_RS05570	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJ259_RS05575	COG4558	Periplasmic binding protein
CJ259_RS05580	COG3720	iron ion transport
CJ259_RS05600	COG0679	Auxin Efflux Carrier
CJ259_RS05615	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CJ259_RS05620	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CJ259_RS05625	COG1121	(ABC) transporter
CJ259_RS05630	COG0803	Belongs to the bacterial solute-binding protein 9 family
CJ259_RS05635	COG1609	Transcriptional regulator
CJ259_RS05640	COG1940	carbohydrate kinase activity
CJ259_RS05645	COG1447	Phosphotransferase system cellobiose-specific component IIA
CJ259_RS05650	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CJ259_RS05655	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CJ259_RS05660	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CJ259_RS05670	COG4580	involved in the transport of maltose and maltodextrins
CJ259_RS05680	COG2723	6-phospho-beta-galactosidase activity
CJ259_RS05690	COG0309	Hydrogenase expression formation protein (HypE)
CJ259_RS05695	COG0409	Hydrogenase expression formation protein
CJ259_RS05700	COG0298	carbon dioxide binding
CJ259_RS05705	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
CJ259_RS05725	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CJ259_RS05730	COG0651	ATP synthesis coupled electron transport
CJ259_RS05735	COG0650	Formate hydrogenlyase subunit 4
CJ259_RS05740	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
CJ259_RS05740	COG3261	NADH dehydrogenase
CJ259_RS05745	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CJ259_RS05750	COG3260	NADH ubiquinone oxidoreductase 20
CJ259_RS05760	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
CJ259_RS05770	COG2723	6-phospho-beta-galactosidase activity
CJ259_RS05775	COG1263	PTS System
CJ259_RS05775	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CJ259_RS05780	COG1609	Transcriptional regulator
CJ259_RS05785	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CJ259_RS05790	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
CJ259_RS05795	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
CJ259_RS05825	COG1349	DNA-binding transcription factor activity
CJ259_RS05830	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ259_RS05835	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS05845	COG3732	PTS system glucitol sorbitol-specific
CJ259_RS05850	COG3730	PTS system glucitol sorbitol-specific
CJ259_RS05855	COG2951	lytic endotransglycosylase activity
CJ259_RS05865	COG1121	(ABC) transporter
CJ259_RS05870	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CJ259_RS05875	COG0803	Belongs to the bacterial solute-binding protein 9 family
CJ259_RS05880	COG1546	Belongs to the CinA family
CJ259_RS05905	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
CJ259_RS05935	COG2823	Periplasmic or secreted lipoprotein
CJ259_RS05940	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CJ259_RS05945	COG1238	metal cluster binding
CJ259_RS05965	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CJ259_RS05970	COG2814	Major facilitator Superfamily
CJ259_RS05975	COG1566	PFAM secretion protein HlyD family protein
CJ259_RS05980	COG1846	Transcriptional regulator
CJ259_RS05990	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
CJ259_RS06000	COG4176	ABC-type proline glycine betaine transport system permease component
CJ259_RS06015	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CJ259_RS06025	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CJ259_RS06030	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CJ259_RS06035	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJ259_RS06040	COG4575	ribosome binding
CJ259_RS06065	COG2916	Histone family protein nucleoid-structuring protein H-NS
CJ259_RS06085	COG0640	Transcriptional regulator
CJ259_RS06095	COG0583	DNA-binding transcription factor activity
CJ259_RS06100	COG3284	Transcriptional regulator
CJ259_RS06110	COG3539	Fimbrial protein
CJ259_RS06115	COG3121	Chaperone
CJ259_RS06135	COG3188	usher protein
CJ259_RS06145	COG3539	Fimbrial protein
CJ259_RS06150	COG2197	response regulator
CJ259_RS06165	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS06175	COG0235	Class ii aldolase
CJ259_RS06185	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJ259_RS06220	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CJ259_RS06225	COG3708	Transcriptional regulator
CJ259_RS06225	COG2207	Transcriptional regulator
CJ259_RS06255	COG2801	Transposase and inactivated derivatives
CJ259_RS06270	COG0582	viral genome integration into host DNA
CJ259_RS06285	COG2867	negative regulation of translational initiation
CJ259_RS06300	COG0497	DNA recombination
CJ259_RS06320	COG4536	flavin adenine dinucleotide binding
CJ259_RS06325	COG4137	Cytochrome C assembly protein
CJ259_RS06330	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CJ259_RS06365	COG2885	chlorophyll binding
CJ259_RS06370	COG2199	diguanylate cyclase activity
CJ259_RS06380	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CJ259_RS06385	COG0287	Prephenate dehydrogenase
CJ259_RS06385	COG1605	Chorismate mutase
CJ259_RS06395	COG0077	Prephenate dehydratase
CJ259_RS06395	COG1605	Chorismate mutase
CJ259_RS06405	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CJ259_RS06410	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CJ259_RS06425	COG0542	response to heat
CJ259_RS06450	COG0477	Major facilitator Superfamily
CJ259_RS06455	COG5544	Lipoprotein
CJ259_RS06460	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CJ259_RS06470	COG3148	PFAM DTW domain containing protein
CJ259_RS06475	COG3118	belongs to the thioredoxin family
CJ259_RS06480	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CJ259_RS06495	COG0513	Belongs to the DEAD box helicase family
CJ259_RS06505	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CJ259_RS06515	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
CJ259_RS06520	COG3026	antisigma factor binding
CJ259_RS06525	COG3086	response to oxidative stress
CJ259_RS06535	COG0681	Belongs to the peptidase S26 family
CJ259_RS06555	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CJ259_RS06565	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CJ259_RS06570	COG1737	Transcriptional regulator
CJ259_RS06575	COG0560	Phosphoserine phosphatase
CJ259_RS06590	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CJ259_RS06590	COG0047	phosphoribosylformylglycinamidine synthase activity
CJ259_RS06595	COG2205	protein histidine kinase activity
CJ259_RS06600	COG3170	Tfp pilus assembly protein FimV
CJ259_RS06605	COG2204	response regulator
CJ259_RS06610	COG0347	Belongs to the P(II) protein family
CJ259_RS06615	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CJ259_RS06615	COG1017	nitric oxide dioxygenase activity
CJ259_RS06630	COG2259	Doxx family
CJ259_RS06635	COG1940	carbohydrate kinase activity
CJ259_RS06640	COG0457	Tetratricopeptide repeat
CJ259_RS06645	COG2814	Major facilitator Superfamily
CJ259_RS06645	COG0477	Major facilitator Superfamily
CJ259_RS06650	COG2017	converts alpha-aldose to the beta-anomer
CJ259_RS06655	COG2814	Major facilitator Superfamily
CJ259_RS06660	COG3711	transcriptional antiterminator
CJ259_RS06665	COG3683	transport system, periplasmic component
CJ259_RS06670	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
CJ259_RS06700	COG0822	iron-sulfur transferase activity
CJ259_RS06720	COG0633	Ferredoxin
CJ259_RS06725	COG2975	iron-sulfur cluster assembly
CJ259_RS06745	COG2897	thiosulfate sulfurtransferase activity
CJ259_RS06750	COG2373	Large extracellular alpha-helical protein
CJ259_RS06755	COG4953	penicillin-binding protein 1C
CJ259_RS06790	COG2976	Protein conserved in bacteria
CJ259_RS06810	COG1645	bacterial-type flagellum-dependent swarming motility
CJ259_RS06820	COG0517	IMP dehydrogenase activity
CJ259_RS06820	COG0516	GMP reductase activity
CJ259_RS06840	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CJ259_RS06845	COG0210	DNA helicase
CJ259_RS06860	COG3119	arylsulfatase activity
CJ259_RS06865	COG0641	radical SAM
CJ259_RS06885	COG2200	EAL domain
CJ259_RS06900	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CJ259_RS06915	COG2723	6-phospho-beta-galactosidase activity
CJ259_RS06925	COG2233	PERMEase
CJ259_RS06940	COG1393	Belongs to the ArsC family
CJ259_RS06945	COG4783	chaperone-mediated protein folding
CJ259_RS06950	COG0628	permease
CJ259_RS06955	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CJ259_RS06960	COG2716	regulation of RNA biosynthetic process
CJ259_RS06970	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
CJ259_RS06980	COG2321	neutral zinc metallopeptidase
CJ259_RS06985	COG1444	tRNA N-acetyltransferase activity
CJ259_RS06990	COG0400	carboxylic ester hydrolase activity
CJ259_RS07005	COG1393	Belongs to the ArsC family
CJ259_RS07015	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CJ259_RS07025	COG0493	'glutamate synthase
CJ259_RS07025	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CJ259_RS07035	COG5342	invasion associated locus B
CJ259_RS07040	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CJ259_RS07045	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CJ259_RS07055	COG4810	utilization protein
CJ259_RS07145	COG0860	N-Acetylmuramoyl-L-alanine amidase
CJ259_RS07165	COG2837	iron assimilation
CJ259_RS07175	COG4150	thiosulfate binding
CJ259_RS07180	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CJ259_RS07185	COG4208	sulfate ABC transporter
CJ259_RS07190	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CJ259_RS07200	COG4319	ketosteroid isomerase
CJ259_RS07235	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CJ259_RS07260	COG0385	Bile acid
CJ259_RS07265	COG0583	DNA-binding transcription factor activity
CJ259_RS07300	COG3415	Transposase
CJ259_RS07305	COG3415	Transposase
CJ259_RS07320	COG2199	diguanylate cyclase activity
CJ259_RS07320	COG2200	EAL domain
CJ259_RS07325	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CJ259_RS07340	COG0667	Aldo Keto reductase
CJ259_RS07345	COG3961	Belongs to the TPP enzyme family
CJ259_RS07360	COG3279	Response regulator of the LytR AlgR family
CJ259_RS07365	COG3275	phosphorelay sensor kinase activity
CJ259_RS07375	COG0436	Aminotransferase
CJ259_RS07385	COG2807	transmembrane transport
CJ259_RS07390	COG0590	tRNA wobble adenosine to inosine editing
CJ259_RS07395	COG0583	DNA-binding transcription factor activity
CJ259_RS07430	COG2885	chlorophyll binding
CJ259_RS07595	COG0582	viral genome integration into host DNA
CJ259_RS07665	COG1846	Transcriptional regulator
CJ259_RS07675	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
CJ259_RS07680	COG1403	HNH endonuclease
CJ259_RS07715	COG3179	chitinase
CJ259_RS07745	COG1802	Transcriptional regulator
CJ259_RS07745	COG4626	Terminase
CJ259_RS07850	COG2116	formate transmembrane transporter activity
CJ259_RS07855	COG2853	Lipoprotein
CJ259_RS07865	COG3691	Protein conserved in bacteria
CJ259_RS07880	COG2062	phosphohistidine phosphatase, SixA
CJ259_RS07905	COG0730	response to heat
CJ259_RS07910	COG3101	peptidyl-lysine hydroxylation
CJ259_RS07925	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CJ259_RS07945	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CJ259_RS07955	COG0586	Pfam SNARE associated Golgi protein
CJ259_RS07965	COG0285	dihydrofolate synthase activity
CJ259_RS07970	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
CJ259_RS07975	COG1286	toxin biosynthetic process
CJ259_RS07980	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CJ259_RS07985	COG0163	prenyltransferase activity
CJ259_RS08005	COG4160	amino acid transport
CJ259_RS08010	COG4598	ABC transporter
CJ259_RS08020	COG1090	epimerase
CJ259_RS08025	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CJ259_RS08030	COG0625	glutathione transferase activity
CJ259_RS08035	COG0625	glutathione transferase activity
CJ259_RS08040	COG0622	Phosphoesterase
CJ259_RS08045	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
CJ259_RS08050	COG0280	phosphate acetyltransferase
CJ259_RS08050	COG0857	belongs to the CobB CobQ family
CJ259_RS08070	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CJ259_RS08075	COG0490	domain, Protein
CJ259_RS08075	COG0471	metal ion transport
CJ259_RS08085	COG0436	Aminotransferase
CJ259_RS08090	COG0583	DNA-binding transcription factor activity
CJ259_RS08145	COG0839	Belongs to the complex I subunit 6 family
CJ259_RS08155	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CJ259_RS08160	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CJ259_RS08175	COG2153	protein acetylation
CJ259_RS08180	COG1169	isochorismate synthase
CJ259_RS08205	COG0318	PFAM AMP-dependent synthetase and ligase
CJ259_RS08215	COG5464	transposase or invertase
CJ259_RS08230	COG1414	Transcriptional regulator
CJ259_RS08240	COG2271	Major facilitator Superfamily
CJ259_RS08250	COG0247	lactate metabolic process
CJ259_RS08260	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CJ259_RS08265	COG2271	Major facilitator Superfamily
CJ259_RS08270	COG0584	glycerophosphoryl diester phosphodiesterase
CJ259_RS08280	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CJ259_RS08310	COG0784	Response regulator, receiver
CJ259_RS08310	COG2205	protein histidine kinase activity
CJ259_RS08320	COG0642	Histidine kinase
CJ259_RS08320	COG2198	Histidine kinase
CJ259_RS08335	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CJ259_RS08335	COG2169	Transcriptional regulator
CJ259_RS08340	COG3145	DNA-N1-methyladenine dioxygenase activity
CJ259_RS08345	COG4615	Cyclic peptide transporter
CJ259_RS08350	COG2239	Acts as a magnesium transporter
CJ259_RS08355	COG0659	secondary active sulfate transmembrane transporter activity
CJ259_RS08370	COG0628	permease
CJ259_RS08395	COG1349	DNA-binding transcription factor activity
CJ259_RS08400	COG0494	nUDIX hydrolase
CJ259_RS08420	COG1061	Type III restriction enzyme res subunit
CJ259_RS08425	COG1187	pseudouridine synthase activity
CJ259_RS08430	COG2814	Major facilitator Superfamily
CJ259_RS08440	COG4172	Belongs to the ABC transporter superfamily
CJ259_RS08445	COG4239	(ABC) transporter, permease
CJ259_RS08450	COG4174	ABC transporter (Permease)
CJ259_RS08455	COG4166	transmembrane transport
CJ259_RS08460	COG2200	EAL domain
CJ259_RS08465	COG0791	NLP P60 protein
CJ259_RS08470	COG0671	phosphoesterase, PA-phosphatase related
CJ259_RS08475	COG0523	cobalamin synthesis protein
CJ259_RS08480	COG0246	Mannitol dehydrogenase
CJ259_RS08485	COG1312	Catalyzes the dehydration of D-mannonate
CJ259_RS08515	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ259_RS08515	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ259_RS08520	COG1105	Belongs to the carbohydrate kinase PfkB family
CJ259_RS08525	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
CJ259_RS08525	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CJ259_RS08525	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CJ259_RS08535	COG2855	membrane
CJ259_RS08545	COG0583	DNA-binding transcription factor activity
CJ259_RS08550	COG0833	amino acid
CJ259_RS08560	COG4771	TonB-dependent receptor
CJ259_RS08575	COG2311	Membrane
CJ259_RS08590	COG1129	ABC transporter
CJ259_RS08600	COG2949	membrane
CJ259_RS08610	COG1346	cytolysis
CJ259_RS08620	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CJ259_RS08625	COG3659	wide pore channel activity
CJ259_RS08640	COG2723	6-phospho-beta-galactosidase activity
CJ259_RS08650	COG1538	Outer membrane efflux protein
CJ259_RS08655	COG0586	Pfam SNARE associated Golgi protein
CJ259_RS08665	COG1686	Belongs to the peptidase S11 family
CJ259_RS08675	COG0277	FAD linked oxidase domain protein
CJ259_RS08680	COG1472	Belongs to the glycosyl hydrolase 3 family
CJ259_RS08685	COG1732	Glycine betaine
CJ259_RS08690	COG1174	glycine betaine transport
CJ259_RS08695	COG1125	glycine betaine transport
CJ259_RS08700	COG1174	glycine betaine transport
CJ259_RS08710	COG3275	phosphorelay sensor kinase activity
CJ259_RS08720	COG4807	Protein conserved in bacteria
CJ259_RS08740	COG5455	response to cobalt ion
CJ259_RS08745	COG0583	DNA-binding transcription factor activity
CJ259_RS08750	COG2252	PERMEase
CJ259_RS08760	COG0583	DNA-binding transcription factor activity
CJ259_RS08775	COG0351	phosphomethylpyrimidine kinase
CJ259_RS08780	COG1830	Aldolase
CJ259_RS08815	COG1070	Carbohydrate kinase
CJ259_RS08825	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CJ259_RS08830	COG4948	Mandelate Racemase Muconate Lactonizing
CJ259_RS08835	COG0747	negative chemotaxis
CJ259_RS08840	COG0601	transmembrane transport
CJ259_RS08845	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CJ259_RS08850	COG0444	Belongs to the ABC transporter superfamily
CJ259_RS08855	COG4608	Belongs to the ABC transporter superfamily
CJ259_RS08865	COG0826	peptidase U32
CJ259_RS08870	COG0745	RESPONSE REGULATOR receiver
CJ259_RS08875	COG2205	protein histidine kinase activity
CJ259_RS08900	COG1301	dicarboxylic acid transport
CJ259_RS08915	COG5002	protein histidine kinase activity
CJ259_RS08920	COG0443	Heat shock 70 kDa protein
CJ259_RS08925	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CJ259_RS08940	COG2982	Protein involved in outer membrane biogenesis
CJ259_RS08945	COG1253	flavin adenine dinucleotide binding
CJ259_RS08985	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CJ259_RS08995	COG1215	transferase activity, transferring glycosyl groups
CJ259_RS09025	COG2244	polysaccharide biosynthetic process
CJ259_RS09075	COG0438	transferase activity, transferring glycosyl groups
CJ259_RS09080	COG1216	Glycosyl transferase, family 2
CJ259_RS09080	COG1442	glycosyl transferase family 8
CJ259_RS09090	COG0463	Glycosyl transferase, family 2
CJ259_RS09115	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CJ259_RS09145	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CJ259_RS09150	COG0583	DNA-binding transcription factor activity
CJ259_RS09160	COG0531	amino acid
CJ259_RS09165	COG0640	Transcriptional regulator
CJ259_RS09170	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CJ259_RS09180	COG2925	Exonuclease
CJ259_RS09195	COG1289	transmembrane transporter activity
CJ259_RS09215	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
CJ259_RS09225	COG1942	4-Oxalocrotonate Tautomerase
CJ259_RS09230	COG0583	DNA-binding transcription factor activity
CJ259_RS09235	COG0095	Lipoate-protein ligase
CJ259_RS09240	COG0477	Major facilitator Superfamily
CJ259_RS09255	COG5001	Diguanylate cyclase
CJ259_RS09255	COG3300	MHYT domain
CJ259_RS09265	COG3615	Tellurite resistance protein tehB
CJ259_RS09290	COG3706	GGDEF domain
CJ259_RS09310	COG0534	Mate efflux family protein
CJ259_RS09320	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CJ259_RS09340	COG0604	alcohol dehydrogenase
CJ259_RS09345	COG1309	transcriptional regulator
CJ259_RS09350	COG0025	NhaP-type Na H and K H
CJ259_RS09380	COG0251	oxidation-reduction process
CJ259_RS09400	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CJ259_RS09415	COG1418	mRNA catabolic process
CJ259_RS09420	COG0270	DNA (cytosine-5-)-methyltransferase activity
CJ259_RS09425	COG3727	T/G mismatch-specific endonuclease activity
CJ259_RS09435	COG2354	Protein conserved in bacteria
CJ259_RS09465	COG0366	Alpha amylase catalytic
CJ259_RS09470	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJ259_RS09480	COG0765	amino acid transport
CJ259_RS09485	COG1126	abc transporter atp-binding protein
CJ259_RS09490	COG2197	response regulator
CJ259_RS09500	COG2197	response regulator
CJ259_RS09540	COG3318	Belongs to the UPF0149 family
CJ259_RS09540	COG3012	SEC-C Motif Domain Protein
CJ259_RS09545	COG0814	amino acid
CJ259_RS09555	COG1528	Iron-storage protein
CJ259_RS09570	COG0477	Major facilitator Superfamily
CJ259_RS09580	COG2211	Major facilitator Superfamily
CJ259_RS09590	COG1528	Iron-storage protein
CJ259_RS09600	COG1879	ABC-type sugar transport system periplasmic component
CJ259_RS09610	COG1172	Belongs to the binding-protein-dependent transport system permease family
CJ259_RS09635	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
CJ259_RS09645	COG3102	Protein conserved in bacteria
CJ259_RS09665	COG3788	relative of glutathione S-transferase, MAPEG superfamily
CJ259_RS09670	COG1801	Protein of unknown function DUF72
CJ259_RS09675	COG1335	isochorismatase
CJ259_RS09685	COG0494	nUDIX hydrolase
CJ259_RS09710	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CJ259_RS09720	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
CJ259_RS09725	COG0739	heme binding
CJ259_RS09730	COG1560	Kdo2-lipid A biosynthetic process
CJ259_RS09740	COG1737	Transcriptional regulator
CJ259_RS09755	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CJ259_RS09760	COG0129	dihydroxy-acid dehydratase activity
CJ259_RS09765	COG0800	Aldolase
CJ259_RS09775	COG3141	response to X-ray
CJ259_RS09780	COG2979	Protein of unknown function (DUF533)
CJ259_RS09785	COG1770	oligopeptidase
CJ259_RS09790	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CJ259_RS09800	COG2372	response to copper ion
CJ259_RS09805	COG1276	copper resistance
CJ259_RS09820	COG2990	Protein conserved in bacteria
CJ259_RS09845	COG3008	intermembrane lipid transfer
CJ259_RS09850	COG2995	paraquat-inducible protein a
CJ259_RS09855	COG1956	GAF domain-containing protein
CJ259_RS09875	COG2814	Major facilitator Superfamily
CJ259_RS09885	COG1414	Transcriptional regulator
CJ259_RS09925	COG0768	penicillin binding
CJ259_RS09930	COG2226	methyltransferase
CJ259_RS09945	COG3716	PTS system mannose fructose sorbose family IID component
CJ259_RS09950	COG3715	PTS system
CJ259_RS09955	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ259_RS09955	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CJ259_RS09960	COG1253	flavin adenine dinucleotide binding
CJ259_RS09965	COG2200	EAL domain
CJ259_RS09970	COG1760	l-serine dehydratase
CJ259_RS09990	COG0251	oxidation-reduction process
CJ259_RS09995	COG1199	ATP-dependent helicase activity
CJ259_RS10005	COG3065	identical protein binding
CJ259_RS10015	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
CJ259_RS10025	COG2894	cell division
CJ259_RS10040	COG0179	Fumarylacetoacetate (FAA) hydrolase
CJ259_RS10070	COG2719	SpoVR family
CJ259_RS10090	COG1619	proteins homologs of microcin C7 resistance protein MccF
CJ259_RS10100	COG4774	siderophore transport
CJ259_RS10115	COG2308	Evidence 4 Homologs of previously reported genes of
CJ259_RS10165	COG0583	DNA-binding transcription factor activity
CJ259_RS10170	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CJ259_RS10185	COG1882	Formate acetyltransferase
CJ259_RS10215	COG0583	DNA-binding transcription factor activity
CJ259_RS10245	COG0583	DNA-binding transcription factor activity
CJ259_RS10260	COG3122	Protein conserved in bacteria
CJ259_RS10285	COG2885	chlorophyll binding
CJ259_RS10295	COG1388	LysM domain
CJ259_RS10355	COG0012	GTP binding
CJ259_RS10375	COG0659	secondary active sulfate transmembrane transporter activity
CJ259_RS10405	COG2890	protein-(glutamine-N5) methyltransferase activity
CJ259_RS10425	COG0387	Pfam Sodium calcium exchanger
CJ259_RS10430	COG4572	Cation transport regulator
CJ259_RS10435	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
CJ259_RS10445	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
CJ259_RS10450	COG3707	response regulator
CJ259_RS10455	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CJ259_RS10465	COG1116	anion transmembrane transporter activity
CJ259_RS10470	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CJ259_RS10470	COG2146	nitrite reductase [NAD(P)H] activity
CJ259_RS10475	COG0243	molybdopterin cofactor binding
CJ259_RS10480	COG4932	domain protein
CJ259_RS10485	COG2197	response regulator
CJ259_RS10490	COG3850	Histidine kinase
CJ259_RS10495	COG2223	nitrite transmembrane transporter activity
CJ259_RS10500	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CJ259_RS10505	COG1140	nitrate reductase beta subunit
CJ259_RS10510	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CJ259_RS10515	COG2181	nitrate reductase activity
CJ259_RS10525	COG1522	sequence-specific DNA binding
CJ259_RS10560	COG0788	formyltetrahydrofolate deformylase activity
CJ259_RS10570	COG1752	Esterase of the alpha-beta hydrolase superfamily
CJ259_RS10575	COG0745	RESPONSE REGULATOR receiver
CJ259_RS10580	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CJ259_RS10585	COG2916	Histone family protein nucleoid-structuring protein H-NS
CJ259_RS10590	COG1435	thymidine kinase activity
CJ259_RS10595	COG1454	alcohol dehydrogenase
CJ259_RS10595	COG1012	belongs to the aldehyde dehydrogenase family
CJ259_RS10605	COG2095	MarC family integral membrane protein
CJ259_RS10610	COG4166	transmembrane transport
CJ259_RS10615	COG0601	transmembrane transport
CJ259_RS10620	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CJ259_RS10625	COG0444	Belongs to the ABC transporter superfamily
CJ259_RS10635	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CJ259_RS10655	COG2353	YceI-like domain
CJ259_RS10660	COG2350	Protein conserved in bacteria
CJ259_RS10670	COG3001	Fructosamine kinase
CJ259_RS10680	COG1105	Belongs to the carbohydrate kinase PfkB family
CJ259_RS10685	COG3137	Salt-induced outer membrane protein
CJ259_RS10730	COG0072	phenylalanine-tRNA ligase activity
CJ259_RS10730	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CJ259_RS10750	COG0583	DNA-binding transcription factor activity
CJ259_RS10770	COG0386	Belongs to the glutathione peroxidase family
CJ259_RS10780	COG0791	NLP P60 protein
CJ259_RS10790	COG4256	Hemin uptake protein
CJ259_RS10795	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CJ259_RS10805	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CJ259_RS10805	COG0574	Belongs to the PEP-utilizing enzyme family
CJ259_RS10815	COG0628	permease
CJ259_RS10820	COG0277	FAD linked oxidase domain protein
CJ259_RS10820	COG0247	lactate metabolic process
CJ259_RS10825	COG2050	protein possibly involved in aromatic compounds catabolism
CJ259_RS10830	COG2261	transglycosylase associated protein
CJ259_RS10860	COG1120	ATPase activity
CJ259_RS10865	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJ259_RS10875	COG0583	DNA-binding transcription factor activity
CJ259_RS10900	COG1304	FMN binding
CJ259_RS10905	COG1309	transcriptional regulator
CJ259_RS10920	COG0316	Belongs to the HesB IscA family
CJ259_RS10925	COG0719	Fe-S assembly protein
CJ259_RS10930	COG0396	ATPase activity
CJ259_RS10935	COG0719	Fe-S assembly protein
CJ259_RS10950	COG1376	ErfK ybiS ycfS ynhG family protein
CJ259_RS10975	COG1309	transcriptional regulator
CJ259_RS10980	COG3185	4-Hydroxyphenylpyruvate dioxygenase
CJ259_RS10980	COG1082	Xylose isomerase domain protein TIM barrel
CJ259_RS10985	COG2271	Major facilitator Superfamily
CJ259_RS10990	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CJ259_RS11000	COG1120	ATPase activity
CJ259_RS11005	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJ259_RS11010	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CJ259_RS11015	COG1414	Transcriptional regulator
CJ259_RS11050	COG2814	Major facilitator Superfamily
CJ259_RS11070	COG0583	DNA-binding transcription factor activity
CJ259_RS11075	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CJ259_RS11095	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CJ259_RS11100	COG1116	anion transmembrane transporter activity
CJ259_RS11105	COG4774	siderophore transport
CJ259_RS11110	COG1120	ATPase activity
CJ259_RS11115	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJ259_RS11120	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJ259_RS11140	COG0765	amino acid transport
CJ259_RS11145	COG1126	abc transporter atp-binding protein
CJ259_RS11175	COG1473	amidohydrolase
CJ259_RS11180	COG3383	formate dehydrogenase (NAD+) activity
CJ259_RS11185	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CJ259_RS11200	COG1175	transmembrane transport
CJ259_RS11230	COG4133	protoheme IX ABC transporter activity
CJ259_RS11235	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CJ259_RS11240	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CJ259_RS11255	COG1138	Cytochrome C-type biogenesis protein
CJ259_RS11260	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CJ259_RS11265	COG4235	cytochrome complex assembly
CJ259_RS11265	COG3088	subunit of a heme lyase
CJ259_RS11300	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
CJ259_RS11315	COG5002	protein histidine kinase activity
CJ259_RS11315	COG3850	Histidine kinase
CJ259_RS11320	COG0745	RESPONSE REGULATOR receiver
CJ259_RS11340	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CJ259_RS11375	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS11380	COG2610	gluconate transmembrane transporter activity
CJ259_RS11385	COG1250	3-hydroxyacyl-CoA dehydrogenase
CJ259_RS11395	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CJ259_RS11405	COG0583	DNA-binding transcription factor activity
CJ259_RS11430	COG0277	FAD linked oxidase domain protein
CJ259_RS11435	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CJ259_RS11460	COG0402	S-adenosylhomocysteine deaminase activity
CJ259_RS11505	COG0604	alcohol dehydrogenase
CJ259_RS11505	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS11505	COG3321	synthase
CJ259_RS11535	COG4608	Belongs to the ABC transporter superfamily
CJ259_RS11540	COG0444	Belongs to the ABC transporter superfamily
CJ259_RS11565	COG0346	lactoylglutathione lyase activity
CJ259_RS11570	COG1349	DNA-binding transcription factor activity
CJ259_RS11600	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CJ259_RS11655	COG0307	riboflavin synthase, alpha
CJ259_RS11660	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CJ259_RS11665	COG2814	Major facilitator Superfamily
CJ259_RS11670	COG0583	DNA-binding transcription factor activity
CJ259_RS11685	COG2814	Major facilitator Superfamily
CJ259_RS11700	COG0791	NLP P60 protein
CJ259_RS11705	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CJ259_RS11715	COG0346	lactoylglutathione lyase activity
CJ259_RS11720	COG1902	pentaerythritol trinitrate reductase activity
CJ259_RS11725	COG1309	transcriptional regulator
CJ259_RS11730	COG3313	Fe-S protein
CJ259_RS11735	COG4989	oxidoreductase activity
CJ259_RS11740	COG2032	superoxide dismutase activity
CJ259_RS11745	COG1289	transmembrane transporter activity
CJ259_RS11750	COG1566	PFAM secretion protein HlyD family protein
CJ259_RS11765	COG3706	GGDEF domain
CJ259_RS11780	COG3895	Periplasmic Protein
CJ259_RS11795	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
CJ259_RS11800	COG0625	glutathione transferase activity
CJ259_RS11815	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CJ259_RS11825	COG4659	FMN binding
CJ259_RS11860	COG2723	6-phospho-beta-galactosidase activity
CJ259_RS11870	COG0673	inositol 2-dehydrogenase activity
CJ259_RS11880	COG2814	Major facilitator Superfamily
CJ259_RS11900	COG3038	cytochrome b561
CJ259_RS11920	COG0583	DNA-binding transcription factor activity
CJ259_RS11925	COG3485	protocatechuate 3,4-dioxygenase
CJ259_RS11930	COG3485	protocatechuate 3,4-dioxygenase
CJ259_RS11935	COG5383	Protein conserved in bacteria
CJ259_RS11940	COG2272	Belongs to the type-B carboxylesterase lipase family
CJ259_RS11955	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJ259_RS11960	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CJ259_RS11965	COG1275	C4-dicarboxylate transporter malic acid transport protein
CJ259_RS11970	COG0500	methyltransferase
CJ259_RS11985	COG3708	Transcriptional regulator
CJ259_RS11985	COG2207	Transcriptional regulator
CJ259_RS11990	COG3135	benzoate transporter
CJ259_RS11995	COG1396	sequence-specific DNA binding
CJ259_RS12005	COG0826	peptidase U32
CJ259_RS12025	COG1294	oxidase, subunit
CJ259_RS12030	COG1271	oxidase subunit
CJ259_RS12035	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJ259_RS12040	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CJ259_RS12045	COG3842	ATPase activity
CJ259_RS12050	COG1176	ABC-type spermidine putrescine transport system, permease component I
CJ259_RS12055	COG1177	transmembrane transport
CJ259_RS12060	COG1012	belongs to the aldehyde dehydrogenase family
CJ259_RS12090	COG1012	belongs to the aldehyde dehydrogenase family
CJ259_RS12095	COG0747	negative chemotaxis
CJ259_RS12105	COG3238	Protein conserved in bacteria
CJ259_RS12110	COG1247	-acetyltransferase
CJ259_RS12120	COG2130	NADP-dependent
CJ259_RS12135	COG3691	Protein conserved in bacteria
CJ259_RS12140	COG1228	amidohydrolase
CJ259_RS12145	COG4772	TonB-dependent receptor
CJ259_RS12170	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CJ259_RS12175	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CJ259_RS12180	COG1473	amidohydrolase
CJ259_RS12185	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CJ259_RS12190	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJ259_RS12200	COG0765	amino acid transport
CJ259_RS12205	COG1126	abc transporter atp-binding protein
CJ259_RS12215	COG0625	glutathione transferase activity
CJ259_RS12245	COG2211	Major facilitator Superfamily
CJ259_RS12260	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CJ259_RS12265	COG3842	ATPase activity
CJ259_RS12270	COG1840	ABC-type Fe3 transport system, periplasmic component
CJ259_RS12275	COG1178	ABC-type Fe3 transport system permease component
CJ259_RS12280	COG2162	N-hydroxyarylamine O-acetyltransferase activity
CJ259_RS12285	COG2181	nitrate reductase activity
CJ259_RS12290	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CJ259_RS12295	COG1140	nitrate reductase beta subunit
CJ259_RS12300	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CJ259_RS12305	COG2223	nitrite transmembrane transporter activity
CJ259_RS12320	COG1414	Transcriptional regulator
CJ259_RS12325	COG4948	Mandelate Racemase Muconate Lactonizing
CJ259_RS12330	COG4829	muconolactone delta-isomerase
CJ259_RS12335	COG3485	protocatechuate 3,4-dioxygenase
CJ259_RS12345	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
CJ259_RS12365	COG0243	molybdopterin cofactor binding
CJ259_RS12365	COG3383	formate dehydrogenase (NAD+) activity
CJ259_RS12370	COG0243	molybdopterin cofactor binding
CJ259_RS12370	COG3383	formate dehydrogenase (NAD+) activity
CJ259_RS12375	COG0437	4 iron, 4 sulfur cluster binding
CJ259_RS12380	COG2864	formate dehydrogenase
CJ259_RS12395	COG2326	polyphosphate kinase activity
CJ259_RS12405	COG2814	Major facilitator Superfamily
CJ259_RS12415	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CJ259_RS12425	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CJ259_RS12435	COG0747	negative chemotaxis
CJ259_RS12440	COG1064	alcohol dehydrogenase
CJ259_RS12455	COG0488	(ABC) transporter
CJ259_RS12490	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS12495	COG3729	General stress protein
CJ259_RS12515	COG3685	Protein conserved in bacteria
CJ259_RS12525	COG0366	Alpha amylase catalytic
CJ259_RS12535	COG2323	membrane
CJ259_RS12545	COG3111	PFAM Bacterial OB fold (BOF) protein
CJ259_RS12550	COG1764	response to oxidative stress
CJ259_RS12575	COG3781	membrane
CJ259_RS12580	COG0243	molybdopterin cofactor binding
CJ259_RS12585	COG0583	DNA-binding transcription factor activity
CJ259_RS12590	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CJ259_RS12615	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CJ259_RS12620	COG1447	Phosphotransferase system cellobiose-specific component IIA
CJ259_RS12625	COG2814	Major facilitator Superfamily
CJ259_RS12635	COG1285	pathogenesis
CJ259_RS12640	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CJ259_RS12650	COG0583	DNA-binding transcription factor activity
CJ259_RS12670	COG0519	Catalyzes the synthesis of GMP from XMP
CJ259_RS12670	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CJ259_RS12710	COG0596	Alpha beta hydrolase
CJ259_RS12720	COG2205	protein histidine kinase activity
CJ259_RS12735	COG0076	glutamate decarboxylase activity
CJ259_RS12740	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CJ259_RS12745	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CJ259_RS12750	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CJ259_RS12755	COG1116	anion transmembrane transporter activity
CJ259_RS12760	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CJ259_RS12775	COG0673	inositol 2-dehydrogenase activity
CJ259_RS12785	COG1609	Transcriptional regulator
CJ259_RS12790	COG3706	GGDEF domain
CJ259_RS12795	COG0402	S-adenosylhomocysteine deaminase activity
CJ259_RS12800	COG1953	Uracil, thiamine, allantoin
CJ259_RS12835	COG0596	Alpha beta hydrolase
CJ259_RS12850	COG2207	Transcriptional regulator
CJ259_RS12865	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CJ259_RS12880	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CJ259_RS12925	COG0765	amino acid transport
CJ259_RS12935	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CJ259_RS12945	COG2070	2-Nitropropane dioxygenase
CJ259_RS12950	COG0583	DNA-binding transcription factor activity
CJ259_RS12960	COG1902	pentaerythritol trinitrate reductase activity
CJ259_RS12965	COG4529	Protein conserved in bacteria
CJ259_RS12970	COG0477	Major facilitator Superfamily
CJ259_RS13000	COG2223	nitrite transmembrane transporter activity
CJ259_RS13010	COG1609	Transcriptional regulator
CJ259_RS13015	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ259_RS13025	COG3037	sugar-specific permease SgaT UlaA
CJ259_RS13030	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CJ259_RS13040	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CJ259_RS13045	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CJ259_RS13045	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
CJ259_RS13045	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CJ259_RS13060	COG0583	DNA-binding transcription factor activity
CJ259_RS13065	COG0583	DNA-binding transcription factor activity
CJ259_RS13070	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJ259_RS13080	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CJ259_RS13095	COG1172	Belongs to the binding-protein-dependent transport system permease family
CJ259_RS13105	COG1609	Transcriptional regulator
CJ259_RS13135	COG1652	LysM domain
CJ259_RS13165	COG0456	acetyltransferase
CJ259_RS13165	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CJ259_RS13175	COG0667	Aldo Keto reductase
CJ259_RS13180	COG0667	Aldo Keto reductase
CJ259_RS13185	COG3386	PFAM SMP-30 Gluconolaconase
CJ259_RS13190	COG0667	Aldo Keto reductase
CJ259_RS13205	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJ259_RS13225	COG2723	6-phospho-beta-galactosidase activity
CJ259_RS13235	COG1349	DNA-binding transcription factor activity
CJ259_RS13250	COG1349	DNA-binding transcription factor activity
CJ259_RS13255	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CJ259_RS13260	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CJ259_RS13265	COG0738	Major facilitator superfamily
CJ259_RS13310	COG1929	Belongs to the glycerate kinase type-1 family
CJ259_RS13315	COG3835	regulator
CJ259_RS13335	COG2186	Transcriptional regulator
CJ259_RS13340	COG1263	PTS System
CJ259_RS13340	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CJ259_RS13350	COG2814	Major facilitator Superfamily
CJ259_RS13355	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ259_RS13355	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ259_RS13365	COG2819	hydrolase of the alpha beta superfamily
CJ259_RS13370	COG5001	Diguanylate cyclase
CJ259_RS13370	COG3300	MHYT domain
CJ259_RS13405	COG3188	usher protein
CJ259_RS13420	COG1649	PFAM Uncharacterised BCR, COG1649
CJ259_RS13425	COG3550	peptidyl-serine autophosphorylation
CJ259_RS13430	COG1396	sequence-specific DNA binding
CJ259_RS13435	COG2351	hydroxyisourate hydrolase activity
CJ259_RS13440	COG3648	Uricase
CJ259_RS13440	COG3195	allantoin biosynthetic process
CJ259_RS13445	COG2233	PERMEase
CJ259_RS13475	COG2207	Transcriptional regulator
CJ259_RS13490	COG4628	conserved protein (DUF2132)
CJ259_RS13510	COG2011	ABC-type metal ion transport system permease component
CJ259_RS13515	COG2070	2-Nitropropane dioxygenase
CJ259_RS13605	COG2199	diguanylate cyclase activity
CJ259_RS13620	COG1012	belongs to the aldehyde dehydrogenase family
CJ259_RS13625	COG0583	DNA-binding transcription factor activity
CJ259_RS13635	COG0039	L-malate dehydrogenase activity
CJ259_RS13640	COG1349	DNA-binding transcription factor activity
CJ259_RS13645	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CJ259_RS13650	COG3395	kinase activity
CJ259_RS13660	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CJ259_RS13665	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CJ259_RS13670	COG2271	Major facilitator Superfamily
CJ259_RS13695	COG4977	sequence-specific DNA binding
CJ259_RS13705	COG0697	spore germination
CJ259_RS13710	COG2814	Major facilitator Superfamily
CJ259_RS13745	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CJ259_RS13780	COG2223	nitrite transmembrane transporter activity
CJ259_RS13785	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CJ259_RS13800	COG1349	DNA-binding transcription factor activity
CJ259_RS13805	COG2084	Dehydrogenase
CJ259_RS13810	COG3395	kinase activity
CJ259_RS13815	COG0235	Class ii aldolase
CJ259_RS13820	COG3622	Belongs to the hyi family
CJ259_RS13825	COG2610	gluconate transmembrane transporter activity
CJ259_RS13830	COG2207	Transcriptional regulator
CJ259_RS13830	COG3708	Transcriptional regulator
CJ259_RS13845	COG2200	EAL domain
CJ259_RS13850	COG1546	Belongs to the CinA family
CJ259_RS13855	COG0071	Belongs to the small heat shock protein (HSP20) family
CJ259_RS13865	COG2197	response regulator
CJ259_RS13870	COG2135	peptidase activity
CJ259_RS13875	COG2207	Transcriptional regulator
CJ259_RS13890	COG4221	oxidoreductase activity
CJ259_RS13895	COG1802	Transcriptional regulator
CJ259_RS13900	COG0589	response to stress
CJ259_RS13905	COG0246	Mannitol dehydrogenase
CJ259_RS13910	COG2271	Major facilitator Superfamily
CJ259_RS13925	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJ259_RS13940	COG0243	molybdopterin cofactor binding
CJ259_RS13945	COG0437	4 iron, 4 sulfur cluster binding
CJ259_RS13950	COG3302	dmso reductase anchor subunit
CJ259_RS13965	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CJ259_RS13970	COG1940	carbohydrate kinase activity
CJ259_RS13975	COG0583	DNA-binding transcription factor activity
CJ259_RS13980	COG2814	Major facilitator Superfamily
CJ259_RS13985	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CJ259_RS13995	COG3591	Belongs to the peptidase S1B family
CJ259_RS14015	COG0628	permease
CJ259_RS14045	COG0679	Auxin Efflux Carrier
CJ259_RS14055	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CJ259_RS14080	COG3290	protein histidine kinase activity
CJ259_RS14085	COG4565	transcriptional regulatory protein
CJ259_RS14110	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CJ259_RS14110	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CJ259_RS14125	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CJ259_RS14130	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CJ259_RS14140	COG0183	Belongs to the thiolase family
CJ259_RS14145	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CJ259_RS14155	COG1414	Transcriptional regulator
CJ259_RS14160	COG2840	Smr protein MutS2
CJ259_RS14165	COG0583	DNA-binding transcription factor activity
CJ259_RS14175	COG1473	amidohydrolase
CJ259_RS14180	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
CJ259_RS14195	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CJ259_RS14210	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CJ259_RS14215	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CJ259_RS14235	COG0531	amino acid
CJ259_RS14245	COG3136	membrane protein required for alginate biosynthesis
CJ259_RS14250	COG0745	RESPONSE REGULATOR receiver
CJ259_RS14260	COG2205	protein histidine kinase activity
CJ259_RS14270	COG0114	fumarate hydratase activity
CJ259_RS14275	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CJ259_RS14275	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CJ259_RS14280	COG1482	cell wall glycoprotein biosynthetic process
CJ259_RS14285	COG5339	Protein conserved in bacteria
CJ259_RS14290	COG1609	Transcriptional regulator
CJ259_RS14295	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CJ259_RS14295	COG1263	PTS System
CJ259_RS14300	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CJ259_RS14325	COG2391	methyltransferase activity
CJ259_RS14330	COG0425	Belongs to the sulfur carrier protein TusA family
CJ259_RS14335	COG5562	phage envelope protein
CJ259_RS14340	COG0401	homolog of Blt101
CJ259_RS14345	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CJ259_RS14350	COG1012	belongs to the aldehyde dehydrogenase family
CJ259_RS14355	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CJ259_RS14360	COG0477	Major facilitator Superfamily
CJ259_RS14365	COG1113	amino acid transport
CJ259_RS14370	COG2988	succinylglutamate desuccinylase activity
CJ259_RS14375	COG3724	N-succinylarginine dihydrolase activity
CJ259_RS14380	COG1012	belongs to the aldehyde dehydrogenase family
CJ259_RS14385	COG3138	arginine N-succinyltransferase
CJ259_RS14390	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CJ259_RS14395	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CJ259_RS14400	COG0667	Aldo Keto reductase
CJ259_RS14405	COG0583	DNA-binding transcription factor activity
CJ259_RS14430	COG4122	O-methyltransferase activity
CJ259_RS14435	COG1643	Atp-dependent helicase
CJ259_RS14450	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CJ259_RS14455	COG3327	negative regulation of DNA-templated transcription, initiation
CJ259_RS14460	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
CJ259_RS14465	COG0183	Belongs to the thiolase family
CJ259_RS14470	COG2050	protein possibly involved in aromatic compounds catabolism
CJ259_RS14475	COG1250	3-hydroxyacyl-CoA dehydrogenase
CJ259_RS14480	COG1024	Enoyl-CoA hydratase
CJ259_RS14485	COG1024	Enoyl-CoA hydratase
CJ259_RS14490	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CJ259_RS14495	COG2151	metal-sulfur cluster biosynthetic enzyme
CJ259_RS14500	COG3396	Phenylacetate-CoA oxygenase
CJ259_RS14505	COG3460	Phenylacetate-CoA oxygenase
CJ259_RS14510	COG3396	Phenylacetate-CoA oxygenase
CJ259_RS14515	COG1012	belongs to the aldehyde dehydrogenase family
CJ259_RS14515	COG2030	dehydratase
CJ259_RS14540	COG1012	belongs to the aldehyde dehydrogenase family
CJ259_RS14545	COG2207	Transcriptional regulator
CJ259_RS14550	COG3784	Protein of unknown function (DUF1318)
CJ259_RS14560	COG2911	Protein conserved in bacteria
CJ259_RS14565	COG0586	Pfam SNARE associated Golgi protein
CJ259_RS14570	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CJ259_RS14575	COG3187	Heat shock protein
CJ259_RS14580	COG3042	response to heat
CJ259_RS14590	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CJ259_RS14590	COG0674	pyruvate-flavodoxin oxidoreductase activity
CJ259_RS14590	COG1013	pyruvate-flavodoxin oxidoreductase activity
CJ259_RS14590	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CJ259_RS14595	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CJ259_RS14605	COG0589	response to stress
CJ259_RS14615	COG0513	Belongs to the DEAD box helicase family
CJ259_RS14630	COG1349	DNA-binding transcription factor activity
CJ259_RS14635	COG0673	inositol 2-dehydrogenase activity
CJ259_RS14650	COG1113	amino acid transport
CJ259_RS14655	COG1522	sequence-specific DNA binding
CJ259_RS14665	COG1448	Aminotransferase
CJ259_RS14670	COG2011	ABC-type metal ion transport system permease component
CJ259_RS14685	COG0436	Aminotransferase
CJ259_RS14690	COG0604	alcohol dehydrogenase
CJ259_RS14715	COG0583	DNA-binding transcription factor activity
CJ259_RS14735	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS14740	COG1309	transcriptional regulator
CJ259_RS14745	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS14830	COG2885	chlorophyll binding
CJ259_RS14855	COG0693	protein deglycase activity
CJ259_RS14860	COG1078	dGTPase activity
CJ259_RS14865	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS14870	COG0583	DNA-binding transcription factor activity
CJ259_RS14890	COG0656	L-ascorbic acid biosynthetic process
CJ259_RS14920	COG4166	transmembrane transport
CJ259_RS14925	COG2866	Carboxypeptidase
CJ259_RS14930	COG4948	Mandelate Racemase Muconate Lactonizing
CJ259_RS14935	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CJ259_RS14940	COG3180	Ammonia monooxygenase
CJ259_RS14955	COG0583	DNA-binding transcription factor activity
CJ259_RS14965	COG3106	COG3106 Predicted ATPase
CJ259_RS14975	COG1983	PspC domain protein
CJ259_RS14985	COG1842	Phage shock protein A
CJ259_RS14990	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CJ259_RS15000	COG1473	amidohydrolase
CJ259_RS15015	COG0702	epimerase
CJ259_RS15030	COG4171	peptide transport system, permease
CJ259_RS15045	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CJ259_RS15055	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CJ259_RS15060	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CJ259_RS15060	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CJ259_RS15075	COG1349	DNA-binding transcription factor activity
CJ259_RS15085	COG0023	Translation Initiation Factor
CJ259_RS15095	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CJ259_RS15100	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
CJ259_RS15105	COG0671	phosphoesterase, PA-phosphatase related
CJ259_RS15115	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CJ259_RS15145	COG0616	signal peptide processing
CJ259_RS15155	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS15160	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
CJ259_RS15170	COG0583	DNA-binding transcription factor activity
CJ259_RS15180	COG0009	L-threonylcarbamoyladenylate synthase
CJ259_RS15190	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CJ259_RS15195	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CJ259_RS15195	COG0512	Glutamine amidotransferase of anthranilate synthase
CJ259_RS15200	COG0135	phosphoribosylanthranilate isomerase activity
CJ259_RS15200	COG0134	indole-3-glycerol-phosphate synthase activity
CJ259_RS15235	COG4774	siderophore transport
CJ259_RS15245	COG3047	cAMP biosynthetic process
CJ259_RS15250	COG0727	PFAM Uncharacterised protein family (UPF0153)
CJ259_RS15280	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CJ259_RS15285	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS15290	COG1988	membrane-bound metal-dependent
CJ259_RS15295	COG1823	symporter activity
CJ259_RS15305	COG0753	catalase activity
CJ259_RS15315	COG1486	melibiose metabolic process
CJ259_RS15320	COG1917	Cupin 2, conserved barrel domain protein
CJ259_RS15320	COG2169	Transcriptional regulator
CJ259_RS15325	COG1447	Phosphotransferase system cellobiose-specific component IIA
CJ259_RS15330	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CJ259_RS15335	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CJ259_RS15340	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CJ259_RS15350	COG0322	excinuclease ABC activity
CJ259_RS15355	COG3678	ATP-independent chaperone mediated protein folding
CJ259_RS15365	COG3724	N-succinylarginine dihydrolase activity
CJ259_RS15375	COG3138	arginine N-succinyltransferase
CJ259_RS15385	COG0708	Exodeoxyribonuclease III
CJ259_RS15390	COG0398	Pfam SNARE associated Golgi protein
CJ259_RS15395	COG0398	Pfam SNARE associated Golgi protein
CJ259_RS15400	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CJ259_RS15405	COG4134	Bacterial extracellular solute-binding protein
CJ259_RS15410	COG4135	transport system, permease component
CJ259_RS15415	COG4136	ATPase activity
CJ259_RS15420	COG2897	thiosulfate sulfurtransferase activity
CJ259_RS15425	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CJ259_RS15430	COG0494	nUDIX hydrolase
CJ259_RS15435	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CJ259_RS15440	COG0604	alcohol dehydrogenase
CJ259_RS15440	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS15440	COG3321	synthase
CJ259_RS15445	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CJ259_RS15450	COG0709	Synthesizes selenophosphate from selenide and ATP
CJ259_RS15470	COG0778	Nitroreductase
CJ259_RS15475	COG0616	signal peptide processing
CJ259_RS15480	COG0252	asparaginase activity
CJ259_RS15485	COG1335	isochorismatase
CJ259_RS15500	COG3139	Protein of unknown function (DUF1315)
CJ259_RS15520	COG0656	L-ascorbic acid biosynthetic process
CJ259_RS15525	COG3713	MltA-interacting MipA family protein
CJ259_RS15530	COG2766	serine protein kinase
CJ259_RS15545	COG0386	Belongs to the glutathione peroxidase family
CJ259_RS15565	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS15570	COG0583	DNA-binding transcription factor activity
CJ259_RS15575	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CJ259_RS15580	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CJ259_RS15585	COG3344	reverse transcriptase
CJ259_RS15600	COG0859	PFAM glycosyl transferase family 9
CJ259_RS15605	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CJ259_RS15615	COG2207	Transcriptional regulator
CJ259_RS15620	COG2807	transmembrane transport
CJ259_RS15625	COG0504	CTP synthase activity
CJ259_RS15630	COG1683	Conserved Protein
CJ259_RS15635	COG3189	MarR family transcriptional regulator
CJ259_RS15640	COG3042	response to heat
CJ259_RS15645	COG2199	diguanylate cyclase activity
CJ259_RS15645	COG2203	Gaf domain
CJ259_RS15665	COG3182	Iron-regulated membrane protein
CJ259_RS15675	COG1560	Kdo2-lipid A biosynthetic process
CJ259_RS15690	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
CJ259_RS15695	COG3706	GGDEF domain
CJ259_RS15700	COG0583	DNA-binding transcription factor activity
CJ259_RS15705	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CJ259_RS15730	COG1294	oxidase, subunit
CJ259_RS15735	COG1271	oxidase subunit
CJ259_RS15740	COG3546	catalase activity
CJ259_RS15745	COG3685	Protein conserved in bacteria
CJ259_RS15750	COG3685	Protein conserved in bacteria
CJ259_RS15755	COG3729	General stress protein
CJ259_RS15760	COG1063	alcohol dehydrogenase
CJ259_RS15765	COG3813	Protein conserved in bacteria
CJ259_RS15785	COG0640	Transcriptional regulator
CJ259_RS15790	COG0538	isocitrate dehydrogenase activity
CJ259_RS15795	COG1187	pseudouridine synthase activity
CJ259_RS15815	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CJ259_RS15835	COG2205	protein histidine kinase activity
CJ259_RS15840	COG2850	peptidyl-arginine hydroxylation
CJ259_RS15860	COG1177	transmembrane transport
CJ259_RS15875	COG0318	PFAM AMP-dependent synthetase and ligase
CJ259_RS15880	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CJ259_RS15885	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CJ259_RS15890	COG0698	ribose 5-phosphate isomerase
CJ259_RS15905	COG3395	kinase activity
CJ259_RS15920	COG2390	Transcriptional regulator
CJ259_RS15930	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CJ259_RS15940	COG4591	ABC-type transport system involved in lipoprotein release permease component
CJ259_RS15950	COG4591	ABC-type transport system involved in lipoprotein release permease component
CJ259_RS15960	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CJ259_RS15965	COG1388	LysM domain
CJ259_RS15965	COG1376	ErfK ybiS ycfS ynhG family protein
CJ259_RS15975	COG1309	transcriptional regulator
CJ259_RS15985	COG3134	Outer membrane lipoprotein
CJ259_RS15990	COG1252	NADH dehydrogenase
CJ259_RS16015	COG5633	Lipoprotein
CJ259_RS16020	COG0537	adenosine 5'-monophosphoramidase activity
CJ259_RS16030	COG0084	hydrolase, TatD family'
CJ259_RS16035	COG0470	DNA polymerase III
CJ259_RS16045	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CJ259_RS16050	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CJ259_RS16055	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CJ259_RS16070	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CJ259_RS16090	COG1399	metal-binding, possibly nucleic acid-binding protein
CJ259_RS16110	COG1530	ribonuclease E activity
CJ259_RS16115	COG0583	DNA-binding transcription factor activity
CJ259_RS16120	COG2814	Major facilitator Superfamily
CJ259_RS16140	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CJ259_RS16190	COG1560	Kdo2-lipid A biosynthetic process
CJ259_RS16210	COG5645	(Lipo)protein
CJ259_RS16250	COG3381	protein complex oligomerization
CJ259_RS16280	COG1309	transcriptional regulator
CJ259_RS16285	COG0583	DNA-binding transcription factor activity
CJ259_RS16295	COG1335	isochorismatase
CJ259_RS16315	COG1702	phosphate starvation-inducible protein PhoH
CJ259_RS16335	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CJ259_RS16345	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CJ259_RS16365	COG1309	transcriptional regulator
CJ259_RS16400	COG2233	PERMEase
CJ259_RS16410	COG3729	General stress protein
CJ259_RS16435	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS16450	COG0531	amino acid
CJ259_RS16460	COG0174	glutamine synthetase
CJ259_RS16465	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CJ259_RS16470	COG1396	sequence-specific DNA binding
CJ259_RS16470	COG1917	Cupin 2, conserved barrel domain protein
CJ259_RS16475	COG1012	belongs to the aldehyde dehydrogenase family
CJ259_RS16480	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CJ259_RS16485	COG0583	DNA-binding transcription factor activity
CJ259_RS16490	COG0473	3-isopropylmalate dehydrogenase activity
CJ259_RS16500	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CJ259_RS16505	COG4638	Rieske (2fe-2S)
CJ259_RS16510	COG1012	belongs to the aldehyde dehydrogenase family
CJ259_RS16515	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CJ259_RS16525	COG2200	EAL domain
CJ259_RS16540	COG0670	Belongs to the BI1 family
CJ259_RS16555	COG2207	Transcriptional regulator
CJ259_RS16560	COG1881	PFAM PEBP family protein
CJ259_RS16585	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CJ259_RS16590	COG2274	protein secretion by the type I secretion system
CJ259_RS16625	COG1832	CoA-binding protein
CJ259_RS16635	COG0210	DNA helicase
CJ259_RS16640	COG3304	Inner membrane component domain
CJ259_RS16645	COG1289	transmembrane transporter activity
CJ259_RS16650	COG3070	regulator of competence-specific genes
CJ259_RS16675	COG1067	ATP-dependent peptidase activity
CJ259_RS16685	COG3130	regulation of translation
CJ259_RS16695	COG3009	Protein conserved in bacteria
CJ259_RS16700	COG3008	intermembrane lipid transfer
CJ259_RS16700	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CJ259_RS16705	COG2995	paraquat-inducible protein a
CJ259_RS16710	COG0488	(ABC) transporter
CJ259_RS16720	COG0633	Ferredoxin
CJ259_RS16720	COG3217	Mosc domain protein beta barrel domain protein
CJ259_RS16735	COG0431	NADPH-dependent FMN reductase
CJ259_RS16740	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CJ259_RS16745	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CJ259_RS16750	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CJ259_RS16760	COG0308	aminopeptidase N
CJ259_RS16775	COG1473	amidohydrolase
CJ259_RS16785	COG0814	amino acid
CJ259_RS16795	COG1522	sequence-specific DNA binding
CJ259_RS16805	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CJ259_RS16810	COG1448	Aminotransferase
CJ259_RS16815	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CJ259_RS16820	COG3108	Peptidase M15
CJ259_RS16830	COG2989	Protein conserved in bacteria
CJ259_RS16840	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
CJ259_RS16850	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CJ259_RS16855	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CJ259_RS16860	COG3173	Aminoglycoside phosphotransferase
CJ259_RS16875	COG3214	Protein conserved in bacteria
CJ259_RS16890	COG2333	competence protein COMEC
CJ259_RS16890	COG0658	competence protein
CJ259_RS16900	COG0539	negative regulation of cytoplasmic translation
CJ259_RS16920	COG2323	membrane
CJ259_RS16925	COG1944	ATP diphosphatase activity
CJ259_RS16930	COG2116	formate transmembrane transporter activity
CJ259_RS16935	COG1882	Formate acetyltransferase
CJ259_RS16940	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CJ259_RS16945	COG0477	Major facilitator Superfamily
CJ259_RS16955	COG3302	dmso reductase anchor subunit
CJ259_RS16960	COG0437	4 iron, 4 sulfur cluster binding
CJ259_RS16965	COG0243	molybdopterin cofactor binding
CJ259_RS16975	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CJ259_RS16985	COG1674	ftsk spoiiie
CJ259_RS16985	COG1178	ABC-type Fe3 transport system permease component
CJ259_RS16995	COG0492	ferredoxin-NADP+ reductase activity
CJ259_RS17000	COG4988	ABC transporter
CJ259_RS17005	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CJ259_RS17020	COG0542	response to heat
CJ259_RS17030	COG1278	Cold shock
CJ259_RS17045	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CJ259_RS17050	COG3593	DNA synthesis involved in DNA repair
CJ259_RS17060	COG2431	L-lysine efflux transmembrane transporter activity
CJ259_RS17070	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CJ259_RS17080	COG0028	Belongs to the TPP enzyme family
CJ259_RS17085	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
CJ259_RS17090	COG0702	epimerase
CJ259_RS17095	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CJ259_RS17100	COG3023	N-Acetylmuramoyl-L-alanine amidase
CJ259_RS17105	COG5001	Diguanylate cyclase
CJ259_RS17105	COG2203	Gaf domain
CJ259_RS17105	COG3706	GGDEF domain
CJ259_RS17105	COG4251	negative regulation of phosphorylation
CJ259_RS17120	COG1126	abc transporter atp-binding protein
CJ259_RS17125	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJ259_RS17130	COG4215	(ABC) transporter
CJ259_RS17135	COG4160	amino acid transport
CJ259_RS17140	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJ259_RS17145	COG5002	protein histidine kinase activity
CJ259_RS17150	COG0745	RESPONSE REGULATOR receiver
CJ259_RS17165	COG1177	transmembrane transport
CJ259_RS17170	COG1176	ABC-type spermidine putrescine transport system, permease component I
CJ259_RS17175	COG3842	ATPase activity
CJ259_RS17180	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CJ259_RS17195	COG0778	Nitroreductase
CJ259_RS17220	COG3226	Transcriptional regulator
CJ259_RS17225	COG0738	Major facilitator superfamily
CJ259_RS17230	COG0561	phosphatase activity
CJ259_RS17235	COG2814	Major facilitator Superfamily
CJ259_RS17245	COG0671	phosphoesterase, PA-phosphatase related
CJ259_RS17250	COG1349	DNA-binding transcription factor activity
CJ259_RS17255	COG1686	Belongs to the peptidase S11 family
CJ259_RS17260	COG0625	glutathione transferase activity
CJ259_RS17265	COG2133	pyrroloquinoline quinone binding
CJ259_RS17275	COG2223	nitrite transmembrane transporter activity
CJ259_RS17300	COG0747	negative chemotaxis
CJ259_RS17315	COG0303	'Molybdopterin
CJ259_RS17320	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CJ259_RS17325	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CJ259_RS17330	COG1882	Formate acetyltransferase
CJ259_RS17335	COG0561	phosphatase activity
CJ259_RS17345	COG1609	Transcriptional regulator
CJ259_RS17350	COG2271	Major facilitator Superfamily
CJ259_RS17360	COG0488	(ABC) transporter
CJ259_RS17365	COG2365	Tyrosine phosphatase family
CJ259_RS17370	COG1376	ErfK ybiS ycfS ynhG family protein
CJ259_RS17375	COG2188	Transcriptional regulator
CJ259_RS17380	COG2723	6-phospho-beta-galactosidase activity
CJ259_RS17385	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CJ259_RS17400	COG2194	sulfuric ester hydrolase activity
CJ259_RS17405	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
CJ259_RS17420	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJ259_RS17425	COG0765	amino acid transport
CJ259_RS17430	COG1126	abc transporter atp-binding protein
CJ259_RS17435	COG0668	transmembrane transport
CJ259_RS17445	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CJ259_RS17455	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CJ259_RS17465	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CJ259_RS17470	COG1199	ATP-dependent helicase activity
CJ259_RS17475	COG0513	Belongs to the DEAD box helicase family
CJ259_RS17480	COG3958	Transketolase
CJ259_RS17485	COG3959	Transketolase, thiamine diphosphate binding domain
CJ259_RS17490	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS17495	COG2271	Major facilitator Superfamily
CJ259_RS17500	COG0583	DNA-binding transcription factor activity
CJ259_RS17505	COG1309	transcriptional regulator
CJ259_RS17510	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CJ259_RS17515	COG1131	(ABC) transporter
CJ259_RS17520	COG0842	Transport permease protein
CJ259_RS17525	COG0842	Transport permease protein
CJ259_RS17540	COG3568	Endonuclease Exonuclease Phosphatase
CJ259_RS17545	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CJ259_RS17550	COG0392	lysyltransferase activity
CJ259_RS17555	COG0670	Belongs to the BI1 family
CJ259_RS17560	COG0314	molybdopterin synthase activity
CJ259_RS17565	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CJ259_RS17575	COG0521	Mo-molybdopterin cofactor biosynthetic process
CJ259_RS17600	COG0745	RESPONSE REGULATOR receiver
CJ259_RS17605	COG0642	Histidine kinase
CJ259_RS17640	COG2226	methyltransferase
CJ259_RS17660	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CJ259_RS17665	COG1881	PFAM PEBP family protein
CJ259_RS17705	COG4677	pectinesterase activity
CJ259_RS17720	COG0589	response to stress
CJ259_RS17725	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CJ259_RS17755	COG0789	Transcriptional regulator
CJ259_RS17760	COG2200	EAL domain
CJ259_RS17785	COG0561	phosphatase activity
CJ259_RS17795	COG4149	molybdate abc transporter
CJ259_RS17800	COG0725	ABC transporter, periplasmic molybdate-binding protein
CJ259_RS17810	COG3585	molybdate ion transport
CJ259_RS17810	COG2005	Transcriptional regulator
CJ259_RS17815	COG1119	ATPase activity
CJ259_RS17825	COG1085	galactose-1-phosphate uridylyltransferase
CJ259_RS17835	COG2017	converts alpha-aldose to the beta-anomer
CJ259_RS17865	COG0471	metal ion transport
CJ259_RS17865	COG0490	domain, Protein
CJ259_RS17870	COG0583	DNA-binding transcription factor activity
CJ259_RS17885	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CJ259_RS17885	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CJ259_RS17890	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CJ259_RS17905	COG3201	nicotinamide mononucleotide transporter
CJ259_RS17910	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
CJ259_RS17955	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
CJ259_RS17960	COG2885	chlorophyll binding
CJ259_RS17970	COG3064	Membrane
CJ259_RS17970	COG3064	Membrane
CJ259_RS17975	COG0848	biopolymer transport protein
CJ259_RS17980	COG0811	peptide transport
CJ259_RS17985	COG0824	Thioesterase
CJ259_RS17990	COG3790	cyd operon protein YbgE
CJ259_RS17995	COG4890	Cyd operon protein YbgT
CJ259_RS18000	COG1294	oxidase, subunit
CJ259_RS18005	COG1271	oxidase subunit
CJ259_RS18015	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CJ259_RS18025	COG0508	dehydrogenase complex catalyzes the overall conversion of
CJ259_RS18030	COG0567	Dehydrogenase, E1 component
CJ259_RS18035	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CJ259_RS18040	COG1053	succinate dehydrogenase
CJ259_RS18045	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
CJ259_RS18050	COG2009	succinate dehydrogenase
CJ259_RS18085	COG1984	allophanate hydrolase subunit 2
CJ259_RS18090	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CJ259_RS18105	COG0415	Belongs to the DNA photolyase family
CJ259_RS18135	COG2205	protein histidine kinase activity
CJ259_RS18140	COG0745	RESPONSE REGULATOR receiver
CJ259_RS18150	COG0033	Phosphoglucomutase
CJ259_RS18160	COG0596	Alpha beta hydrolase
CJ259_RS18175	COG0735	belongs to the Fur family
CJ259_RS18215	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CJ259_RS18220	COG1846	Transcriptional regulator
CJ259_RS18220	COG1940	carbohydrate kinase activity
CJ259_RS18225	COG0647	UMP catabolic process
CJ259_RS18230	COG0367	asparagine synthase
CJ259_RS18275	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CJ259_RS18285	COG1702	phosphate starvation-inducible protein PhoH
CJ259_RS18310	COG0765	amino acid transport
CJ259_RS18315	COG0765	amino acid transport
CJ259_RS18320	COG1126	abc transporter atp-binding protein
CJ259_RS18335	COG2888	peptidyl-tyrosine sulfation
CJ259_RS18350	COG1466	dna polymerase III delta subunit
CJ259_RS18370	COG0799	negative regulation of ribosome biogenesis
CJ259_RS18380	COG0768	penicillin binding
CJ259_RS18385	COG0772	Belongs to the SEDS family
CJ259_RS18390	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CJ259_RS18395	COG1686	Belongs to the peptidase S11 family
CJ259_RS18410	COG0583	DNA-binding transcription factor activity
CJ259_RS18425	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CJ259_RS18445	COG3069	C4-dicarboxylate transmembrane transporter activity
CJ259_RS18450	COG3719	Belongs to the RNase T2 family
CJ259_RS18455	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CJ259_RS18475	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CJ259_RS18480	COG0583	DNA-binding transcription factor activity
CJ259_RS18485	COG3969	phosphoadenosine phosphosulfate
CJ259_RS18490	COG1475	DNA binding
CJ259_RS18495	COG0436	Aminotransferase
CJ259_RS18520	COG1129	ABC transporter
CJ259_RS18525	COG1172	Belongs to the binding-protein-dependent transport system permease family
CJ259_RS18530	COG1172	Belongs to the binding-protein-dependent transport system permease family
CJ259_RS18540	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CJ259_RS18555	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CJ259_RS18565	COG0402	S-adenosylhomocysteine deaminase activity
CJ259_RS18575	COG0483	inositol monophosphate 1-phosphatase activity
CJ259_RS18580	COG2271	Major facilitator Superfamily
CJ259_RS18615	COG1172	Belongs to the binding-protein-dependent transport system permease family
CJ259_RS18620	COG1129	ABC transporter
CJ259_RS18625	COG0371	Dehydrogenase
CJ259_RS18630	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS18645	COG2879	small protein
CJ259_RS18650	COG1966	Carbon starvation protein
CJ259_RS18660	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS18665	COG1535	isochorismatase
CJ259_RS18665	COG3433	isochorismatase activity
CJ259_RS18670	COG1021	2,3-dihydroxybenzoate-AMP ligase
CJ259_RS18675	COG1169	isochorismate synthase
CJ259_RS18680	COG4592	Periplasmic binding protein
CJ259_RS18690	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJ259_RS18695	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJ259_RS18700	COG1120	ATPase activity
CJ259_RS18705	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
CJ259_RS18705	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CJ259_RS18710	COG3251	PFAM MbtH domain protein
CJ259_RS18715	COG2382	esterase
CJ259_RS18720	COG4771	TonB-dependent receptor
CJ259_RS18725	COG2977	Belongs to the P-Pant transferase superfamily
CJ259_RS18730	COG3958	Transketolase
CJ259_RS18735	COG3959	Transketolase, thiamine diphosphate binding domain
CJ259_RS18745	COG2390	Transcriptional regulator
CJ259_RS18750	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CJ259_RS18755	COG1879	ABC-type sugar transport system periplasmic component
CJ259_RS18765	COG1129	ABC transporter
CJ259_RS18770	COG1172	Belongs to the binding-protein-dependent transport system permease family
CJ259_RS18780	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS18790	COG0583	DNA-binding transcription factor activity
CJ259_RS18795	COG0668	transmembrane transport
CJ259_RS18805	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CJ259_RS18830	COG0747	negative chemotaxis
CJ259_RS18835	COG0601	transmembrane transport
CJ259_RS18840	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CJ259_RS18845	COG0444	Belongs to the ABC transporter superfamily
CJ259_RS18850	COG4608	Belongs to the ABC transporter superfamily
CJ259_RS18860	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CJ259_RS18865	COG4221	oxidoreductase activity
CJ259_RS18875	COG4215	(ABC) transporter
CJ259_RS18885	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
CJ259_RS18900	COG0697	spore germination
CJ259_RS18910	COG3698	Phosphodiester glycosidase
CJ259_RS18955	COG2315	Protein conserved in bacteria
CJ259_RS18960	COG0778	Nitroreductase
CJ259_RS18970	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CJ259_RS18980	COG3716	PTS system mannose fructose sorbose family IID component
CJ259_RS18985	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CJ259_RS18990	COG2222	sugar isomerase
CJ259_RS18995	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CJ259_RS18995	COG3933	PFAM sigma-54 factor interaction domain-containing protein
CJ259_RS19015	COG0477	Major facilitator Superfamily
CJ259_RS19020	COG0668	transmembrane transport
CJ259_RS19035	COG0673	inositol 2-dehydrogenase activity
CJ259_RS19045	COG2211	Major facilitator Superfamily
CJ259_RS19050	COG1113	amino acid transport
CJ259_RS19065	COG1012	belongs to the aldehyde dehydrogenase family
CJ259_RS19070	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CJ259_RS19080	COG0531	amino acid
CJ259_RS19095	COG4680	protein conserved in bacteria
CJ259_RS19145	COG0667	Aldo Keto reductase
CJ259_RS19150	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJ259_RS19155	COG1473	amidohydrolase
CJ259_RS19180	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJ259_RS19185	COG1120	ATPase activity
CJ259_RS19190	COG1566	PFAM secretion protein HlyD family protein
CJ259_RS19235	COG4211	Belongs to the binding-protein-dependent transport system permease family
CJ259_RS19240	COG1129	ABC transporter
CJ259_RS19255	COG0673	inositol 2-dehydrogenase activity
CJ259_RS19285	COG3104	oligopeptide transport
CJ259_RS19290	COG1982	Orn Lys Arg decarboxylase major
CJ259_RS19295	COG0531	amino acid
CJ259_RS19300	COG3710	Transcriptional regulator
CJ259_RS19310	COG1560	Kdo2-lipid A biosynthetic process
CJ259_RS19325	COG3188	usher protein
CJ259_RS19330	COG3121	Chaperone
CJ259_RS19335	COG3539	Fimbrial protein
CJ259_RS19520	COG3567	Phage-associated protein, HI1409 family
CJ259_RS19525	COG1783	phage Terminase large subunit
CJ259_RS19550	COG3772	lysozyme
CJ259_RS19570	COG4725	Belongs to the MT-A70-like family
CJ259_RS19620	COG1846	Transcriptional regulator
CJ259_RS19695	COG0582	viral genome integration into host DNA
CJ259_RS19715	COG2501	S4 domain
CJ259_RS19725	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CJ259_RS19740	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CJ259_RS19745	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CJ259_RS19760	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
CJ259_RS19765	COG4181	ATPase activity
CJ259_RS19770	COG2755	lipolytic protein G-D-S-L family
CJ259_RS19775	COG0300	oxidoreductase activity
CJ259_RS19780	COG3118	belongs to the thioredoxin family
CJ259_RS19790	COG0390	transport system, permease component
CJ259_RS19795	COG4619	ABC transporter
CJ259_RS19800	COG0330	HflC and HflK could
CJ259_RS19805	COG1585	Membrane protein implicated in regulation of membrane protease activity
CJ259_RS19820	COG3735	TraB family
CJ259_RS19825	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CJ259_RS19835	COG2223	nitrite transmembrane transporter activity
CJ259_RS19840	COG4651	solute:proton antiporter activity
CJ259_RS19840	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CJ259_RS19845	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CJ259_RS19885	COG2832	Protein of unknown function (DUF454)
CJ259_RS19890	COG3923	Primosomal replication protein n
CJ259_RS19900	COG5464	transposase or invertase
CJ259_RS19905	COG3264	Mechanosensitive ion channel
CJ259_RS19905	COG1196	nuclear chromosome segregation
CJ259_RS19910	COG1309	transcriptional regulator
CJ259_RS19915	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CJ259_RS19920	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CJ259_RS19935	COG0110	maltose O-acetyltransferase activity
CJ259_RS19980	COG1874	Beta-galactosidase
CJ259_RS19985	COG3867	Arabinogalactan endo-beta-1,4-galactanase
CJ259_RS19990	COG3833	ABC-type maltose transport systems, permease component
CJ259_RS19995	COG1175	transmembrane transport
CJ259_RS20000	COG2182	Extracellular solute-binding protein
CJ259_RS20010	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CJ259_RS20025	COG2364	Membrane
CJ259_RS20055	COG3695	enzyme binding
CJ259_RS20060	COG3126	Type III secretion system lipoprotein chaperone (YscW)
CJ259_RS20065	COG1946	Acyl-CoA thioesterase
CJ259_RS20070	COG0004	ammonium transporteR
CJ259_RS20075	COG0347	Belongs to the P(II) protein family
CJ259_RS20080	COG1132	(ABC) transporter
CJ259_RS20085	COG1132	(ABC) transporter
CJ259_RS20090	COG1522	sequence-specific DNA binding
CJ259_RS20105	COG4533	DNA binding
CJ259_RS20115	COG0824	Thioesterase
CJ259_RS20120	COG1555	photosystem II stabilization
CJ259_RS20125	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CJ259_RS20130	COG0776	regulation of translation
CJ259_RS20135	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CJ259_RS20165	COG0271	Belongs to the BolA IbaG family
CJ259_RS20170	COG3056	Lipoprotein
CJ259_RS20175	COG2223	nitrite transmembrane transporter activity
CJ259_RS20180	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CJ259_RS20185	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CJ259_RS20190	COG1845	cytochrome c oxidase, subunit III
CJ259_RS20195	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CJ259_RS20210	COG1414	Transcriptional regulator
CJ259_RS20215	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CJ259_RS20220	COG1053	succinate dehydrogenase
CJ259_RS20230	COG1053	succinate dehydrogenase
CJ259_RS20245	COG0673	inositol 2-dehydrogenase activity
CJ259_RS20250	COG2814	Major facilitator Superfamily
CJ259_RS20260	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CJ259_RS20265	COG0693	protein deglycase activity
CJ259_RS20285	COG0142	geranyltranstransferase activity
CJ259_RS20295	COG0667	Aldo Keto reductase
CJ259_RS20300	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CJ259_RS20320	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CJ259_RS20320	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CJ259_RS20330	COG4238	major outer membrane lipoprotein
CJ259_RS20350	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CJ259_RS20355	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CJ259_RS20360	COG1862	Preprotein translocase
CJ259_RS20380	COG0450	alkyl hydroperoxide reductase
CJ259_RS20385	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ259_RS20400	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CJ259_RS20410	COG1228	amidohydrolase
CJ259_RS20420	COG1335	isochorismatase
CJ259_RS20425	COG0583	DNA-binding transcription factor activity
CJ259_RS20430	COG0366	Alpha amylase catalytic
CJ259_RS20455	COG0420	3'-5' exonuclease activity
CJ259_RS20460	COG0419	ATPase involved in DNA repair
CJ259_RS20465	COG1940	carbohydrate kinase activity
CJ259_RS20480	COG4126	flavin adenine dinucleotide binding
CJ259_RS20490	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CJ259_RS20495	COG3416	Protein conserved in bacteria
CJ259_RS20505	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CJ259_RS20515	COG1785	Belongs to the alkaline phosphatase family
CJ259_RS20555	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
CJ259_RS20560	COG1335	isochorismatase
CJ259_RS20565	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CJ259_RS20570	COG0113	porphobilinogen synthase activity
CJ259_RS20580	COG2175	clavaminate synthase activity
CJ259_RS20585	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CJ259_RS20590	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
CJ259_RS20595	COG4521	taurine ABC transporter
CJ259_RS20600	COG2040	homocysteine
CJ259_RS20605	COG0833	amino acid
CJ259_RS20615	COG4303	Ethanolamine ammonia lyase large subunit
CJ259_RS20620	COG4302	ethanolamine ammonia-lyase activity
CJ259_RS20655	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJ259_RS20660	COG1126	abc transporter atp-binding protein
CJ259_RS20665	COG4597	amino acid ABC transporter
CJ259_RS20670	COG0765	amino acid transport
CJ259_RS20685	COG3188	usher protein
CJ259_RS20710	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
CJ259_RS20720	COG3639	organic phosphonate transmembrane transporter activity
CJ259_RS20760	COG0791	NLP P60 protein
CJ259_RS20785	COG0582	viral genome integration into host DNA
CJ259_RS20820	COG3121	Chaperone
CJ259_RS20825	COG3188	usher protein
CJ259_RS20855	COG2909	trisaccharide binding
CJ259_RS20860	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CJ259_RS20865	COG0022	dehydrogenase e1 component
CJ259_RS20870	COG0508	dehydrogenase complex catalyzes the overall conversion of
CJ259_RS20875	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CJ259_RS20900	COG1070	Carbohydrate kinase
CJ259_RS20905	COG1028	Short-chain dehydrogenase reductase Sdr
CJ259_RS20910	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CJ259_RS20915	COG3775	system Galactitol-specific IIC component
CJ259_RS20920	COG0625	glutathione transferase activity
CJ259_RS20925	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CJ259_RS20945	COG0579	oxidoreductase
CJ259_RS20950	COG1012	belongs to the aldehyde dehydrogenase family
CJ259_RS20955	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CJ259_RS20960	COG1113	amino acid transport
CJ259_RS20965	COG1802	Transcriptional regulator
CJ259_RS20980	COG1596	polysaccharide export
CJ259_RS21000	COG0463	Glycosyl transferase, family 2
CJ259_RS21005	COG0438	transferase activity, transferring glycosyl groups
CJ259_RS21010	COG0438	transferase activity, transferring glycosyl groups
CJ259_RS21010	COG0297	glycogen (starch) synthase activity
CJ259_RS21025	COG1045	serine acetyltransferase
CJ259_RS21045	COG2195	Cleaves the N-terminal amino acid of tripeptides
CJ259_RS21050	COG0454	-acetyltransferase
CJ259_RS21065	COG2991	Protein conserved in bacteria
CJ259_RS21080	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
CJ259_RS21085	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
CJ259_RS21105	COG3034	peptidoglycan biosynthetic process
CJ259_RS21110	COG0121	glutamine amidotransferase
CJ259_RS21120	COG1960	acyl-CoA dehydrogenase activity
CJ259_RS21125	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CJ259_RS21135	COG0583	DNA-binding transcription factor activity
CJ259_RS21145	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CJ259_RS21155	COG2226	methyltransferase
CJ259_RS21165	COG1388	LysM domain
CJ259_RS21165	COG0741	lytic transglycosylase activity
CJ259_RS21170	COG2226	methyltransferase
CJ259_RS21180	COG2814	Major facilitator Superfamily
CJ259_RS21185	COG0583	DNA-binding transcription factor activity
CJ259_RS21190	COG0656	L-ascorbic acid biosynthetic process
CJ259_RS21225	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CJ259_RS21235	COG2011	ABC-type metal ion transport system permease component
CJ259_RS21240	COG1464	Belongs to the NlpA lipoprotein family
CJ259_RS21250	COG1720	tRNA m6t6A37 methyltransferase activity
CJ259_RS21260	COG0791	NLP P60 protein
CJ259_RS21265	COG3015	lipoprotein NlpE involved in copper resistance
CJ259_RS21270	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CJ259_RS21285	COG4568	rho-dependent transcription termination
CJ259_RS21295	COG0346	lactoylglutathione lyase activity
CJ259_RS21300	COG1982	Orn Lys Arg decarboxylase major
CJ259_RS21310	COG0587	DNA-directed DNA polymerase activity
CJ259_RS21340	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
CJ259_RS21350	COG0750	zinc metalloprotease
CJ259_RS21355	COG0575	Belongs to the CDS family
CJ259_RS21370	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CJ259_RS21395	COG0024	Methionine aminopeptidase
CJ259_RS21400	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
CJ259_RS21415	COG3835	regulator
CJ259_RS21420	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CJ259_RS21440	COG2860	membrane
CJ259_RS21460	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CJ259_RS21465	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CJ259_RS21470	COG1120	ATPase activity
CJ259_RS21475	COG4774	siderophore transport
CJ259_RS21480	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CJ259_RS21565	COG1643	Atp-dependent helicase
CJ259_RS21570	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
CJ259_RS21590	COG0617	tRNA 3'-terminal CCA addition
CJ259_RS21595	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CJ259_RS21615	COG0726	polysaccharide deacetylase
CJ259_RS21620	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ259_RS21625	COG0842	Transport permease protein
CJ259_RS21630	COG1131	(ABC) transporter
CJ259_RS21635	COG0288	reversible hydration of carbon dioxide
CJ259_RS21645	COG4993	Dehydrogenase
CJ259_RS21650	COG2132	Multicopper oxidase
CJ259_RS21690	COG3064	Membrane
CJ259_RS21705	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CJ259_RS21710	COG0508	dehydrogenase complex catalyzes the overall conversion of
CJ259_RS21715	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
CJ259_RS21720	COG2186	Transcriptional regulator
CJ259_RS21725	COG1113	amino acid transport
CJ259_RS21730	COG2211	Major facilitator Superfamily
CJ259_RS21735	COG3940	Belongs to the glycosyl hydrolase 43 family
CJ259_RS21740	COG3725	Membrane protein required for beta-lactamase induction
CJ259_RS21745	COG3023	N-Acetylmuramoyl-L-alanine amidase
CJ259_RS21755	COG4969	Belongs to the N-Me-Phe pilin family
CJ259_RS21760	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CJ259_RS21765	COG1459	type II secretion system
CJ259_RS21790	COG0494	nUDIX hydrolase
CJ259_RS21810	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CJ259_RS21815	COG0849	cell division
CJ259_RS21840	COG0772	Belongs to the SEDS family
CJ259_RS21855	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CJ259_RS21860	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CJ259_RS21865	COG0768	penicillin binding
CJ259_RS21885	COG1609	Transcriptional regulator
CJ259_RS21895	COG0028	Belongs to the TPP enzyme family
CJ259_RS21945	COG0738	Major facilitator superfamily
CJ259_RS21955	COG0583	DNA-binding transcription factor activity
CJ259_RS21960	COG2271	Major facilitator Superfamily
CJ259_RS21965	COG2814	Major facilitator Superfamily
CJ259_RS21985	COG1178	ABC-type Fe3 transport system permease component
CJ259_RS21995	COG0586	Pfam SNARE associated Golgi protein
CJ259_RS22015	COG0235	Class ii aldolase
CJ259_RS22020	COG0417	DNA replication proofreading
CJ259_RS22030	COG0564	pseudouridine synthase activity
CJ259_RS22045	COG3493	citrate carrier protein
CJ259_RS22060	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CJ259_RS22065	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CJ259_RS22075	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CJ259_RS22130	COG0505	Belongs to the CarA family
CJ259_RS22195	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CJ259_RS22220	COG1047	Peptidyl-prolyl cis-trans
CJ259_RS22235	COG0196	riboflavin kinase activity
CJ259_RS22250	COG0583	DNA-binding transcription factor activity
CJ259_RS22275	COG4735	regulation of single-species biofilm formation
CJ259_RS22280	COG1584	GPR1 FUN34 yaaH family protein
CJ259_RS22285	COG0477	Major facilitator Superfamily
CJ259_RS22290	COG0521	Mo-molybdopterin cofactor biosynthetic process
CJ259_RS22295	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CJ259_RS22300	COG1115	amino acid carrier protein
CJ259_RS22315	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
CJ259_RS22325	COG0460	homoserine dehydrogenase
CJ259_RS22325	COG0527	aspartate kinase activity
CJ259_RS22335	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
CJ259_RS22350	COG0745	RESPONSE REGULATOR receiver
CJ259_RS22355	COG4452	Inner membrane protein CreD
CJ259_RS22360	COG2205	protein histidine kinase activity
CJ259_RS22365	COG0745	RESPONSE REGULATOR receiver
CJ259_RS22370	COG3045	CreA protein
CJ259_RS22375	COG3708	Transcriptional regulator
CJ259_RS22375	COG2207	Transcriptional regulator
CJ259_RS22395	COG0741	lytic transglycosylase activity
CJ259_RS22400	COG0488	(ABC) transporter
CJ259_RS22410	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CJ259_RS22415	COG0560	Phosphoserine phosphatase
CJ259_RS22425	COG3726	membrane protein affecting hemolysin expression
CJ259_RS22455	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CJ259_RS22460	COG0084	hydrolase, TatD family'
CJ259_RS22465	COG4667	esterase of the alpha-beta hydrolase superfamily
CJ259_RS22475	COG2823	Periplasmic or secreted lipoprotein
CJ259_RS22485	COG1011	Hydrolase
CJ259_RS22490	COG0456	acetyltransferase
CJ259_RS22495	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
CJ259_RS22525	COG3706	GGDEF domain
CJ259_RS22530	COG4114	ferric iron reductase
CJ259_RS22535	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CJ259_RS22535	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CJ259_RS22540	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CJ259_RS22545	COG2197	response regulator
CJ259_RS22550	COG2197	response regulator
CJ259_RS22570	COG2966	Psort location CytoplasmicMembrane, score
CJ259_RS22585	COG1484	DNA-dependent DNA replication
CJ259_RS22600	COG5464	transposase or invertase
CJ259_RS22605	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CJ259_RS22610	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CJ259_RS22615	COG3716	PTS system mannose fructose sorbose family IID component
CJ259_RS22620	COG3715	PTS system
CJ259_RS22635	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CJ259_RS22635	COG3933	PFAM sigma-54 factor interaction domain-containing protein
CJ259_RS22640	COG1214	PFAM Peptidase M22, glycoprotease
CJ259_RS22640	COG0456	acetyltransferase
CJ259_RS22650	COG1737	Transcriptional regulator
CJ259_RS22655	COG0800	Aldolase
CJ259_RS22660	COG3734	2-keto-3-deoxy-galactonokinase
CJ259_RS22675	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
CJ259_RS22695	COG0531	amino acid
CJ259_RS22700	COG1012	belongs to the aldehyde dehydrogenase family
CJ259_RS22705	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CJ259_RS22720	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
CJ259_RS22720	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CJ259_RS22735	COG1846	Transcriptional regulator
CJ259_RS22740	COG0179	Fumarylacetoacetate (FAA) hydrolase
CJ259_RS22750	COG1012	belongs to the aldehyde dehydrogenase family
CJ259_RS22755	COG3384	dioxygenase
CJ259_RS22765	COG3971	2-oxopent-4-enoate hydratase activity
CJ259_RS22785	COG2368	4-hydroxyphenylacetate
CJ259_RS22790	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CJ259_RS22805	COG1966	Carbon starvation protein
CJ259_RS22810	COG2879	small protein
CJ259_RS22815	COG0523	cobalamin synthesis protein
CJ259_RS22825	COG1012	belongs to the aldehyde dehydrogenase family
CJ259_RS22830	COG5464	transposase or invertase
CJ259_RS22835	COG1917	Cupin 2, conserved barrel domain protein
CJ259_RS22835	COG2207	Transcriptional regulator
CJ259_RS22845	COG2733	membrane
CJ259_RS22860	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
CJ259_RS22865	COG1924	4 iron, 4 sulfur cluster binding
CJ259_RS22880	COG1566	PFAM secretion protein HlyD family protein
CJ259_RS22890	COG5457	Domain of unknown function (DUF1127)
CJ259_RS22895	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CJ259_RS22905	COG0583	DNA-binding transcription factor activity
CJ259_RS22910	COG2249	NAD(P)H dehydrogenase (quinone) activity
CJ259_RS22945	COG1012	belongs to the aldehyde dehydrogenase family
CJ259_RS22945	COG1454	alcohol dehydrogenase
CJ259_RS22960	COG1882	Formate acetyltransferase
CJ259_RS22965	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CJ259_RS22975	COG4869	propanediol catabolic process
CJ259_RS23000	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CJ259_RS23005	COG1129	ABC transporter
CJ259_RS23005	COG0842	Transport permease protein
CJ259_RS23010	COG0842	Transport permease protein
CJ259_RS23045	COG2850	peptidyl-arginine hydroxylation
CJ259_RS23060	COG5002	protein histidine kinase activity
CJ259_RS23065	COG0745	RESPONSE REGULATOR receiver
CJ259_RS23070	COG1538	Outer membrane efflux protein
CJ259_RS23075	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CJ259_RS23080	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CJ259_RS23085	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CJ259_RS23095	COG3040	lipid binding
CJ259_RS23100	COG0789	Transcriptional regulator
CJ259_RS23105	COG3631	Ketosteroid isomerase-related protein
CJ259_RS23110	COG0300	oxidoreductase activity
CJ259_RS23125	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CJ259_RS23145	COG3272	Protein of unknown function (DUF1722)
CJ259_RS23155	COG4580	involved in the transport of maltose and maltodextrins
CJ259_RS23165	COG2211	Major facilitator Superfamily
CJ259_RS23170	COG3507	Belongs to the glycosyl hydrolase 43 family
CJ259_RS23195	COG2003	Belongs to the UPF0758 family
CJ259_RS23220	COG2378	regulation of single-species biofilm formation
CJ259_RS23240	COG1201	RNA secondary structure unwinding
CJ259_RS23295	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
CJ259_RS23310	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
CJ259_RS23340	COG0288	reversible hydration of carbon dioxide
CJ259_RS23345	COG0659	secondary active sulfate transmembrane transporter activity
CJ259_RS23350	COG1064	alcohol dehydrogenase
CJ259_RS23355	COG1175	transmembrane transport
CJ259_RS23360	COG0395	ABC-type sugar transport system, permease component
CJ259_RS23365	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CJ259_RS23370	COG3842	ATPase activity
CJ259_RS23385	COG1082	Xylose isomerase domain protein TIM barrel
CJ259_RS23395	COG3962	Belongs to the TPP enzyme family
CJ259_RS23400	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CJ259_RS23405	COG0837	glucose binding
CJ259_RS23405	COG1737	Transcriptional regulator
CJ259_RS23420	COG3718	enzyme involved in inositol metabolism
CJ259_RS23435	COG0433	COG0433 Predicted ATPase
CJ259_RS23440	COG0795	lipopolysaccharide-transporting ATPase activity
CJ259_RS23445	COG0795	lipopolysaccharide-transporting ATPase activity
CJ259_RS23460	COG2927	DNA polymerase III (CHI subunit)
CJ259_RS23465	COG0525	valine-tRNA ligase activity
CJ259_RS23490	COG2188	Transcriptional regulator
CJ259_RS23495	COG1288	antiporter activity
CJ259_RS23500	COG1228	amidohydrolase
CJ259_RS23505	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CJ259_RS23510	COG2222	sugar isomerase
CJ259_RS23515	COG2731	YhcH YjgK YiaL family protein
CJ259_RS23560	COG1263	PTS System
CJ259_RS23560	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CJ259_RS23565	COG0366	Alpha amylase catalytic
CJ259_RS23570	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CJ259_RS23575	COG1486	melibiose metabolic process
CJ259_RS23595	COG0602	queuosine metabolic process
CJ259_RS23600	COG2026	Addiction module toxin, RelE StbE family
CJ259_RS23605	COG3077	Addiction module antitoxin, RelB DinJ family
CJ259_RS23610	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CJ259_RS23610	COG3711	transcriptional antiterminator
CJ259_RS23615	COG2706	6-phosphogluconolactonase activity
CJ259_RS23630	COG3964	amidohydrolase
CJ259_RS23665	COG0312	modulator of DNA gyrase
CJ259_RS23685	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CJ259_RS23695	COG1172	Belongs to the binding-protein-dependent transport system permease family
CJ259_RS23700	COG1172	Belongs to the binding-protein-dependent transport system permease family
CJ259_RS23705	COG1129	ABC transporter
CJ259_RS23710	COG1879	ABC-type sugar transport system periplasmic component
CJ259_RS23730	COG2105	PFAM AIG2 family protein
CJ259_RS23735	COG2911	Protein conserved in bacteria
CJ259_RS23740	COG0729	surface antigen
CJ259_RS23750	COG1253	flavin adenine dinucleotide binding
CJ259_RS23775	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
CJ259_RS23790	COG1733	regulation of RNA biosynthetic process
CJ259_RS23795	COG0702	epimerase
CJ259_RS23805	COG0697	spore germination
CJ259_RS23815	COG1113	amino acid transport
CJ259_RS23820	COG0545	Peptidyl-prolyl cis-trans isomerase
CJ259_RS23825	COG3061	Opacity-associated protein A
CJ259_RS23835	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CJ259_RS23840	COG2965	DNA replication, synthesis of RNA primer
CJ259_RS23900	COG1073	alpha beta
CJ259_RS23905	COG3650	response to hydrogen peroxide
CJ259_RS23915	COG1960	acyl-CoA dehydrogenase activity
CJ259_RS23920	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CJ259_RS23925	COG0557	exoribonuclease II activity
CJ259_RS23940	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
CJ259_RS23950	COG0330	HflC and HflK could
CJ259_RS23955	COG0330	HflC and HflK could
CJ259_RS23960	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CJ259_RS23980	COG0860	N-Acetylmuramoyl-L-alanine amidase
CJ259_RS23985	COG0802	atpase or kinase
CJ259_RS23990	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CJ259_RS23990	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CJ259_RS23995	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CJ259_RS24020	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CJ259_RS24045	COG3264	Mechanosensitive ion channel
CJ259_RS24045	COG1511	domain protein
CJ259_RS24060	COG1053	succinate dehydrogenase
CJ259_RS24065	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CJ259_RS24085	COG2076	Multidrug Resistance protein
CJ259_RS24090	COG5510	response to toxic substance
CJ259_RS24105	COG1509	lysine 2,3-aminomutase activity
CJ259_RS24175	COG0531	amino acid
CJ259_RS24180	COG3030	protein affecting phage T7 exclusion by the F plasmid
CJ259_RS24190	COG1027	Aspartate ammonia-lyase
CJ259_RS24195	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CJ259_RS24210	COG1309	transcriptional regulator
CJ259_RS24245	COG0457	Tetratricopeptide repeat
CJ259_RS24250	COG1649	PFAM Uncharacterised BCR, COG1649
CJ259_RS24250	COG0726	polysaccharide deacetylase
CJ259_RS24255	COG1215	transferase activity, transferring glycosyl groups
CJ259_RS24275	COG0861	Integral membrane protein TerC family
CJ259_RS24310	COG1486	melibiose metabolic process
CJ259_RS24320	COG2169	Transcriptional regulator
CJ259_RS24335	COG2824	Alkylphosphonate utilization operon protein PhnA
CJ259_RS24340	COG2764	glyoxalase bleomycin resistance protein dioxygenase
CJ259_RS24345	COG2188	Transcriptional regulator
CJ259_RS24350	COG3624	Phosphonate C-P lyase system protein PhnG
CJ259_RS24355	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
CJ259_RS24360	COG3626	phosphonate metabolism
CJ259_RS24365	COG3627	carbon phosphorus lyase activity
CJ259_RS24370	COG4107	phosphonate C-P lyase system protein PhnK
CJ259_RS24375	COG4778	phosphonate C-P lyase system protein PhnL
CJ259_RS24380	COG3454	Phosphonate metabolism
CJ259_RS24390	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CJ259_RS24400	COG0784	Response regulator, receiver
CJ259_RS24400	COG4191	Histidine kinase
CJ259_RS24405	COG1129	ABC transporter
CJ259_RS24410	COG1172	Belongs to the binding-protein-dependent transport system permease family
CJ259_RS24445	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
CJ259_RS24450	COG1301	dicarboxylic acid transport
CJ259_RS24460	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CJ259_RS24470	COG3162	membrane
CJ259_RS24500	COG3539	Fimbrial protein
CJ259_RS24505	COG1346	cytolysis
CJ259_RS24510	COG1380	Effector of murein hydrolase LrgA
CJ259_RS24515	COG0583	DNA-binding transcription factor activity
CJ259_RS24520	COG0025	NhaP-type Na H and K H
CJ259_RS24525	COG2252	PERMEase
CJ259_RS24530	COG0625	glutathione transferase activity
CJ259_RS24535	COG0789	Transcriptional regulator
CJ259_RS24545	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CJ259_RS24580	COG1234	tRNA 3'-trailer cleavage
CJ259_RS24585	COG1609	Transcriptional regulator
CJ259_RS24590	COG0483	inositol monophosphate 1-phosphatase activity
CJ259_RS24605	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CJ259_RS24625	COG4771	TonB-dependent receptor
CJ259_RS24630	COG0741	lytic transglycosylase activity
CJ259_RS24650	COG2315	Protein conserved in bacteria
CJ259_RS24655	COG0432	Pfam Uncharacterised protein family UPF0047
CJ259_RS24670	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CJ259_RS24675	COG0305	Participates in initiation and elongation during chromosome replication
CJ259_RS24690	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CJ259_RS24700	COG0735	belongs to the Fur family
CJ259_RS24705	COG3237	CsbD-like
CJ259_RS24710	COG0534	Mate efflux family protein
CJ259_RS24720	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CJ259_RS24795	COG0251	oxidation-reduction process
CJ259_RS24805	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CJ259_RS24825	COG0527	aspartate kinase activity
CJ259_RS24880	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CJ259_RS24910	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CJ259_RS24920	COG0456	acetyltransferase
CJ259_RS24955	COG0151	Belongs to the GarS family
CJ259_RS24965	COG4191	Histidine kinase
CJ259_RS24970	COG3678	ATP-independent chaperone mediated protein folding
CJ259_RS25005	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
CJ259_RS25020	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CJ259_RS25025	COG2104	thiamine diphosphate biosynthetic process
CJ259_RS25045	COG3706	GGDEF domain
CJ259_RS25055	COG1447	Phosphotransferase system cellobiose-specific component IIA
CJ259_RS25060	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CJ259_RS25100	COG0250	Participates in transcription elongation, termination and antitermination
CJ259_RS25150	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CJ259_RS25180	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
CJ259_RS25190	COG1739	Uncharacterized protein family UPF0029
CJ259_RS25235	COG0805	protein transport
CJ259_RS25255	COG3165	ubiquinone biosynthetic process from chorismate
CJ259_RS25285	COG0583	DNA-binding transcription factor activity
CJ259_RS25290	COG0697	spore germination
CJ259_RS25295	COG0561	phosphatase activity
CJ259_RS25300	COG2267	carboxylic ester hydrolase activity
CJ259_RS25305	COG1280	lysine exporter protein (LysE YggA)
CJ259_RS25315	COG1280	lysine exporter protein (LysE YggA)
CJ259_RS25350	COG0210	DNA helicase
CJ259_RS25355	COG1011	Hydrolase
CJ259_RS25385	COG3072	Adenylate cyclase
CJ259_RS25400	COG2959	enzyme of heme biosynthesis
CJ259_RS25405	COG3071	HemY protein
CJ259_RS25450	COG2244	polysaccharide biosynthetic process
CJ259_RS25455	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CJ259_RS25460	COG0456	acetyltransferase
CJ259_RS25465	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CJ259_RS25470	COG1088	dTDP-glucose 4,6-dehydratase activity
CJ259_RS25475	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CJ259_RS25480	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CJ259_RS25490	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CJ259_RS25495	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CJ259_RS25505	COG3118	belongs to the thioredoxin family
CJ259_RS25535	COG1811	Na channel or pump
CJ259_RS25545	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CJ259_RS25550	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CJ259_RS25560	COG0583	DNA-binding transcription factor activity
CJ259_RS25565	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CJ259_RS25580	COG3978	acetolactate synthase activity
CJ259_RS25600	COG3085	chromosome segregation
CJ259_RS25675	COG0583	DNA-binding transcription factor activity
CJ259_RS25700	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CJ259_RS25715	COG3443	Belongs to the bacterial solute-binding protein 9 family
CJ259_RS25720	COG2207	Transcriptional regulator
CJ259_RS25730	COG0371	Dehydrogenase
CJ259_RS25735	COG0697	spore germination
CJ259_RS25745	COG0583	DNA-binding transcription factor activity
CJ259_RS25755	COG0737	Belongs to the 5'-nucleotidase family
CJ259_RS25765	COG0527	aspartate kinase activity
CJ259_RS25765	COG0460	homoserine dehydrogenase
CJ259_RS25770	COG0626	cystathionine gamma-synthase activity
CJ259_RS25785	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CJ259_RS25790	COG1609	Transcriptional regulator
CJ259_RS25795	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CJ259_RS25810	COG1575	Belongs to the MenA family. Type 1 subfamily
CJ259_RS25830	COG3678	ATP-independent chaperone mediated protein folding
CJ259_RS25835	COG0745	RESPONSE REGULATOR receiver
CJ259_RS25840	COG2205	protein histidine kinase activity
CJ259_RS25845	COG2258	MOSC domain
CJ259_RS25850	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CJ259_RS25895	COG1129	ABC transporter
CJ259_RS25900	COG1172	Belongs to the binding-protein-dependent transport system permease family
CJ259_RS25905	COG1172	Belongs to the binding-protein-dependent transport system permease family
CJ259_RS25910	COG1454	alcohol dehydrogenase
CJ259_RS25920	COG2211	Major facilitator Superfamily
CJ259_RS25980	COG0205	6-phosphofructokinase activity
CJ259_RS25995	COG3383	formate dehydrogenase (NAD+) activity
CJ259_RS25995	COG0243	molybdopterin cofactor binding
CJ259_RS26000	COG0243	molybdopterin cofactor binding
CJ259_RS26000	COG3383	formate dehydrogenase (NAD+) activity
CJ259_RS26005	COG0437	4 iron, 4 sulfur cluster binding
CJ259_RS26010	COG2864	formate dehydrogenase
CJ259_RS26025	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CJ259_RS26035	COG0456	acetyltransferase
CJ259_RS26050	COG1011	Hydrolase
CJ259_RS26070	COG3852	Histidine kinase
CJ259_RS26080	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CJ259_RS26110	COG0204	Acyl-transferase
CJ259_RS26120	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CJ259_RS26125	COG3084	Protein conserved in bacteria
CJ259_RS26135	COG1763	Mo-molybdopterin cofactor biosynthetic process
CJ259_RS26170	COG2186	Transcriptional regulator
CJ259_RS26175	COG0477	Major facilitator Superfamily
CJ259_RS26180	COG1609	Transcriptional regulator
CJ259_RS26185	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CJ259_RS26195	COG1172	Belongs to the binding-protein-dependent transport system permease family
CJ259_RS26200	COG1129	ABC transporter
CJ259_RS26230	COG1522	sequence-specific DNA binding
CJ259_RS26235	COG0716	FMN binding
CJ259_RS26250	COG3312	ion transport
CJ259_RS26300	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CJ259_RS26305	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CJ259_RS26310	COG0573	inorganic phosphate transmembrane transporter activity
CJ259_RS26315	COG0581	inorganic phosphate transmembrane transporter activity
CJ259_RS26320	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CJ259_RS26325	COG0704	Plays a role in the regulation of phosphate uptake
CJ259_RS26340	COG2382	esterase
CJ259_RS26345	COG0363	glucosamine-6-phosphate deaminase activity
CJ259_RS26350	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CJ259_RS26360	COG2252	PERMEase
CJ259_RS26365	COG0431	NADPH-dependent FMN reductase
CJ259_RS26370	COG2091	lysine biosynthetic process via aminoadipic acid
CJ259_RS26400	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
CJ259_RS26420	COG0745	RESPONSE REGULATOR receiver
CJ259_RS26425	COG2205	protein histidine kinase activity
CJ259_RS26445	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CJ259_RS26460	COG0431	NADPH-dependent FMN reductase
CJ259_RS26490	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CJ259_RS26555	COG2801	Transposase and inactivated derivatives
CJ259_RS26570	COG0501	Belongs to the peptidase M48B family
CJ259_RS26590	COG0542	response to heat
CJ259_RS26595	COG0071	Belongs to the small heat shock protein (HSP20) family
CJ259_RS26620	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CJ259_RS26645	COG0683	leucine binding
CJ259_RS26650	COG5002	protein histidine kinase activity
CJ259_RS26650	COG2198	Histidine kinase
CJ259_RS26650	COG0784	Response regulator, receiver
CJ259_RS26655	COG0745	RESPONSE REGULATOR receiver
CJ259_RS26820	COG0697	spore germination
CJ259_RS26840	COG4644	lycopene metabolic process
CJ259_RS26880	COG5001	Diguanylate cyclase
CJ259_RS26880	COG3300	MHYT domain
CJ259_RS26990	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
CJ259_RS27150	COG1475	DNA binding
CJ259_RS27235	COG5499	transcription regulator containing HTH domain
CJ259_RS27475	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
CJ259_RS27545	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
CJ259_RS27580	COG5433	transposase activity
CJ259_RS27605	COG4644	lycopene metabolic process
CJ259_RS27690	COG3344	reverse transcriptase
CJ259_RS27765	COG2199	diguanylate cyclase activity
CJ259_RS27765	COG2203	Gaf domain
CJ259_RS27770	COG5001	Diguanylate cyclase
CJ259_RS27770	COG1716	ATPase activity
CJ259_RS27790	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CJ259_RS27800	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CJ259_RS27850	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CJ259_RS27880	COG0739	heme binding
CJ259_RS27890	COG2132	Multicopper oxidase
CJ259_RS27895	COG3667	copper resistance
CJ259_RS27900	COG2372	response to copper ion
CJ259_RS27905	COG1276	copper resistance