##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2591776v1 #!genome-build-accession NCBI_Assembly:GCF_025917765.1 #!annotation-date 11/01/2022 08:55:43 #!annotation-source NCBI RefSeq ##sequence-region NZ_CP100601.1 1 5264967 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=573 NZ_CP100601.1 RefSeq region 1 5264967 . + . ID=NZ_CP100601.1:1..5264967;Dbxref=taxon:573;Is_circular=true;Name=ANONYMOUS;collected-by=hu renjing;collection-date=2017-12-21;country=China:jiangsu;gbkey=Src;genome=chromosome;genotype=K16;isolation-source=Pus;lat-lon=31.57 N 120.30 E;mol_type=genomic DNA;nat-host=Homo sapiens;strain=WX17388 NZ_CP100601.1 RefSeq gene 1 1404 . + . ID=gene-NLI98_RS00005;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=NLI98_RS00005;old_locus_tag=NLI98_00005 NZ_CP100601.1 Protein Homology CDS 1 1404 . + 0 ID=cds-WP_004151534.1;Parent=gene-NLI98_RS00005;Dbxref=Genbank:WP_004151534.1;Name=WP_004151534.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229578.1;locus_tag=NLI98_RS00005;product=chromosomal replication initiator protein DnaA;protein_id=WP_004151534.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1409 2509 . + . ID=gene-NLI98_RS00010;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=NLI98_RS00010;old_locus_tag=NLI98_00010 NZ_CP100601.1 Protein Homology CDS 1409 2509 . + 0 ID=cds-WP_038432369.1;Parent=gene-NLI98_RS00010;Dbxref=Genbank:WP_038432369.1;Name=WP_038432369.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=NLI98_RS00010;product=DNA polymerase III subunit beta;protein_id=WP_038432369.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2717 3790 . + . ID=gene-NLI98_RS00015;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=NLI98_RS00015;old_locus_tag=NLI98_00015 NZ_CP100601.1 Protein Homology CDS 2717 3790 . + 0 ID=cds-WP_004150293.1;Parent=gene-NLI98_RS00015;Dbxref=Genbank:WP_004150293.1;Name=WP_004150293.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121479.1;locus_tag=NLI98_RS00015;product=DNA replication/repair protein RecF;protein_id=WP_004150293.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3819 6233 . + . ID=gene-NLI98_RS00020;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=NLI98_RS00020;old_locus_tag=NLI98_00020 NZ_CP100601.1 Protein Homology CDS 3819 6233 . + 0 ID=cds-WP_004173845.1;Parent=gene-NLI98_RS00020;Dbxref=Genbank:WP_004173845.1;Name=WP_004173845.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121480.1;locus_tag=NLI98_RS00020;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_004173845.1;transl_table=11 NZ_CP100601.1 RefSeq gene 6435 7247 . + . ID=gene-NLI98_RS00025;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=NLI98_RS00025;old_locus_tag=NLI98_00025 NZ_CP100601.1 Protein Homology CDS 6435 7247 . + 0 ID=cds-WP_004151530.1;Parent=gene-NLI98_RS00025;Dbxref=Genbank:WP_004151530.1;Name=WP_004151530.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229574.1;locus_tag=NLI98_RS00025;product=sugar-phosphatase;protein_id=WP_004151530.1;transl_table=11 NZ_CP100601.1 RefSeq gene 7397 8479 . + . ID=gene-NLI98_RS00030;Name=NLI98_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00030;old_locus_tag=NLI98_00030 NZ_CP100601.1 Protein Homology CDS 7397 8479 . + 0 ID=cds-WP_088498444.1;Parent=gene-NLI98_RS00030;Dbxref=Genbank:WP_088498444.1;Name=WP_088498444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229573.1;locus_tag=NLI98_RS00030;product=hypothetical protein;protein_id=WP_088498444.1;transl_table=11 NZ_CP100601.1 RefSeq gene 8476 9609 . + . ID=gene-NLI98_RS00035;Name=NLI98_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00035;old_locus_tag=NLI98_00035 NZ_CP100601.1 Protein Homology CDS 8476 9609 . + 0 ID=cds-WP_004901578.1;Parent=gene-NLI98_RS00035;Dbxref=Genbank:WP_004901578.1;Name=WP_004901578.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229572.1;locus_tag=NLI98_RS00035;product=BamA/TamA family outer membrane protein;protein_id=WP_004901578.1;transl_table=11 NZ_CP100601.1 RefSeq gene 9839 10528 . + . ID=gene-NLI98_RS00040;Name=dgoR;gbkey=Gene;gene=dgoR;gene_biotype=protein_coding;locus_tag=NLI98_RS00040;old_locus_tag=NLI98_00040 NZ_CP100601.1 Protein Homology CDS 9839 10528 . + 0 ID=cds-WP_004145084.1;Parent=gene-NLI98_RS00040;Dbxref=Genbank:WP_004145084.1;Name=WP_004145084.1;gbkey=CDS;gene=dgoR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229571.1;locus_tag=NLI98_RS00040;product=D-galactonate utilization transcriptional regulator DgoR;protein_id=WP_004145084.1;transl_table=11 NZ_CP100601.1 RefSeq gene 10525 11403 . + . ID=gene-NLI98_RS00045;Name=NLI98_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00045;old_locus_tag=NLI98_00045 NZ_CP100601.1 Protein Homology CDS 10525 11403 . + 0 ID=cds-WP_004145083.1;Parent=gene-NLI98_RS00045;Dbxref=Genbank:WP_004145083.1;Name=WP_004145083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229570.1;locus_tag=NLI98_RS00045;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_004145083.1;transl_table=11 NZ_CP100601.1 RefSeq gene 11387 12004 . + . ID=gene-NLI98_RS00050;Name=NLI98_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00050;old_locus_tag=NLI98_00050 NZ_CP100601.1 Protein Homology CDS 11387 12004 . + 0 ID=cds-WP_004181595.1;Parent=gene-NLI98_RS00050;Dbxref=Genbank:WP_004181595.1;Name=WP_004181595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229569.1;locus_tag=NLI98_RS00050;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_004181595.1;transl_table=11 NZ_CP100601.1 RefSeq gene 12001 13149 . + . ID=gene-NLI98_RS00055;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=NLI98_RS00055;old_locus_tag=NLI98_00055 NZ_CP100601.1 Protein Homology CDS 12001 13149 . + 0 ID=cds-WP_004150286.1;Parent=gene-NLI98_RS00055;Dbxref=Genbank:WP_004150286.1;Name=WP_004150286.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077623.1;locus_tag=NLI98_RS00055;product=galactonate dehydratase;protein_id=WP_004150286.1;transl_table=11 NZ_CP100601.1 RefSeq gene 13327 14664 . + . ID=gene-NLI98_RS00060;Name=NLI98_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00060;old_locus_tag=NLI98_00060 NZ_CP100601.1 Protein Homology CDS 13327 14664 . + 0 ID=cds-WP_004150285.1;Parent=gene-NLI98_RS00060;Dbxref=Genbank:WP_004150285.1;Name=WP_004150285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462727.1;locus_tag=NLI98_RS00060;product=MFS transporter;protein_id=WP_004150285.1;transl_table=11 NZ_CP100601.1 RefSeq gene 14716 15942 . + . ID=gene-NLI98_RS00065;Name=NLI98_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00065;old_locus_tag=NLI98_00065 NZ_CP100601.1 Protein Homology CDS 14716 15942 . + 0 ID=cds-WP_004150284.1;Parent=gene-NLI98_RS00065;Dbxref=Genbank:WP_004150284.1;Name=WP_004150284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229566.1;locus_tag=NLI98_RS00065;product=DUF3748 domain-containing protein;protein_id=WP_004150284.1;transl_table=11 NZ_CP100601.1 RefSeq gene 15944 16276 . - . ID=gene-NLI98_RS00070;Name=NLI98_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00070;old_locus_tag=NLI98_00070 NZ_CP100601.1 Protein Homology CDS 15944 16276 . - 0 ID=cds-WP_004151524.1;Parent=gene-NLI98_RS00070;Dbxref=Genbank:WP_004151524.1;Name=WP_004151524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229565.1;locus_tag=NLI98_RS00070;product=YceK/YidQ family lipoprotein;protein_id=WP_004151524.1;transl_table=11 NZ_CP100601.1 cmsearch sequence_feature 16522 16597 . + . ID=id-NZ_CP100601.1:16522..16597;Dbxref=RFAM:RF01832;Note=ROSE (Repression Of Heat Shock gene Expression) occurs in the 5'-region of heat shock genes and acts as an RNA thermometer to modulate expression.;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP100601.1 RefSeq gene 16591 17004 . + . ID=gene-NLI98_RS00075;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=NLI98_RS00075;old_locus_tag=NLI98_00075 NZ_CP100601.1 Protein Homology CDS 16591 17004 . + 0 ID=cds-WP_004151523.1;Parent=gene-NLI98_RS00075;Dbxref=Genbank:WP_004151523.1;Name=WP_004151523.1;gbkey=CDS;gene=ibpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006687722.1;locus_tag=NLI98_RS00075;product=heat shock chaperone IbpA;protein_id=WP_004151523.1;transl_table=11 NZ_CP100601.1 RefSeq gene 17121 17549 . + . ID=gene-NLI98_RS00080;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=NLI98_RS00080;old_locus_tag=NLI98_00080 NZ_CP100601.1 Protein Homology CDS 17121 17549 . + 0 ID=cds-WP_004145074.1;Parent=gene-NLI98_RS00080;Dbxref=Genbank:WP_004145074.1;Name=WP_004145074.1;gbkey=CDS;gene=ibpB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229563.1;locus_tag=NLI98_RS00080;product=heat shock chaperone IbpB;protein_id=WP_004145074.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 17686 18509 . + . ID=gene-NLI98_RS00085;Name=dinD;gbkey=Gene;gene=dinD;gene_biotype=pseudogene;locus_tag=NLI98_RS00085;old_locus_tag=NLI98_00085;pseudo=true NZ_CP100601.1 Protein Homology CDS 17686 18509 . + 0 ID=cds-NLI98_RS00085;Parent=gene-NLI98_RS00085;Note=frameshifted;gbkey=CDS;gene=dinD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229562.1;locus_tag=NLI98_RS00085;product=DNA damage-inducible protein D;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 18611 20272 . + . ID=gene-NLI98_RS00090;Name=NLI98_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00090;old_locus_tag=NLI98_00090 NZ_CP100601.1 Protein Homology CDS 18611 20272 . + 0 ID=cds-WP_064114548.1;Parent=gene-NLI98_RS00090;Dbxref=Genbank:WP_064114548.1;Name=WP_064114548.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229561.1;locus_tag=NLI98_RS00090;product=putative transporter;protein_id=WP_064114548.1;transl_table=11 NZ_CP100601.1 RefSeq gene 20264 20986 . - . ID=gene-NLI98_RS00095;Name=NLI98_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00095;old_locus_tag=NLI98_00095 NZ_CP100601.1 Protein Homology CDS 20264 20986 . - 0 ID=cds-WP_064279139.1;Parent=gene-NLI98_RS00095;Dbxref=Genbank:WP_064279139.1;Name=WP_064279139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229560.1;locus_tag=NLI98_RS00095;product=GntR family transcriptional regulator;protein_id=WP_064279139.1;transl_table=11 NZ_CP100601.1 RefSeq gene 21285 22907 . + . ID=gene-NLI98_RS00100;Name=NLI98_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00100;old_locus_tag=NLI98_00100 NZ_CP100601.1 Protein Homology CDS 21285 22907 . + 0 ID=cds-WP_159195376.1;Parent=gene-NLI98_RS00100;Dbxref=Genbank:WP_159195376.1;Name=WP_159195376.1;Ontology_term=GO:0015144;gbkey=CDS;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229559.1;locus_tag=NLI98_RS00100;product=alpha-glucoside-specific PTS transporter subunit IIBC;protein_id=WP_159195376.1;transl_table=11 NZ_CP100601.1 RefSeq gene 22904 24226 . + . ID=gene-NLI98_RS00105;Name=NLI98_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00105;old_locus_tag=NLI98_00105 NZ_CP100601.1 Protein Homology CDS 22904 24226 . + 0 ID=cds-WP_002923306.1;Parent=gene-NLI98_RS00105;Dbxref=Genbank:WP_002923306.1;Name=WP_002923306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229558.1;locus_tag=NLI98_RS00105;product=6-phospho-alpha-glucosidase;protein_id=WP_002923306.1;transl_table=11 NZ_CP100601.1 RefSeq gene 24328 24675 . + . ID=gene-NLI98_RS00110;Name=NLI98_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00110;old_locus_tag=NLI98_00110 NZ_CP100601.1 Protein Homology CDS 24328 24675 . + 0 ID=cds-WP_002923305.1;Parent=gene-NLI98_RS00110;Dbxref=Genbank:WP_002923305.1;Name=WP_002923305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229557.1;locus_tag=NLI98_RS00110;product=DUF202 domain-containing protein;protein_id=WP_002923305.1;transl_table=11 NZ_CP100601.1 RefSeq gene 24665 25027 . + . ID=gene-NLI98_RS00115;Name=NLI98_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00115;old_locus_tag=NLI98_00115 NZ_CP100601.1 Protein Homology CDS 24665 25027 . + 0 ID=cds-WP_002923304.1;Parent=gene-NLI98_RS00115;Dbxref=Genbank:WP_002923304.1;Name=WP_002923304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229556.1;locus_tag=NLI98_RS00115;product=DUF202 domain-containing protein;protein_id=WP_002923304.1;transl_table=11 NZ_CP100601.1 RefSeq gene 25102 25524 . + . ID=gene-NLI98_RS00120;Name=NLI98_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00120;old_locus_tag=NLI98_00120 NZ_CP100601.1 Protein Homology CDS 25102 25524 . + 0 ID=cds-WP_002923302.1;Parent=gene-NLI98_RS00120;Dbxref=Genbank:WP_002923302.1;Name=WP_002923302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229555.1;locus_tag=NLI98_RS00120;product=hypothetical protein;protein_id=WP_002923302.1;transl_table=11 NZ_CP100601.1 RefSeq gene 25528 26856 . - . ID=gene-NLI98_RS00125;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=NLI98_RS00125;old_locus_tag=NLI98_00125 NZ_CP100601.1 Protein Homology CDS 25528 26856 . - 0 ID=cds-WP_064279143.1;Parent=gene-NLI98_RS00125;Dbxref=Genbank:WP_064279143.1;Name=WP_064279143.1;Ontology_term=GO:0046416,GO:0008721,GO:0005737;gbkey=CDS;gene=dsdA;go_component=cytoplasm|0005737||IEA;go_function=D-serine ammonia-lyase activity|0008721||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229554.1;locus_tag=NLI98_RS00125;product=D-serine ammonia-lyase;protein_id=WP_064279143.1;transl_table=11 NZ_CP100601.1 RefSeq gene 26874 28211 . - . ID=gene-NLI98_RS00130;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=NLI98_RS00130;old_locus_tag=NLI98_00130 NZ_CP100601.1 Protein Homology CDS 26874 28211 . - 0 ID=cds-WP_004173855.1;Parent=gene-NLI98_RS00130;Dbxref=Genbank:WP_004173855.1;Name=WP_004173855.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229553.1;locus_tag=NLI98_RS00130;product=D-serine transporter DsdX;protein_id=WP_004173855.1;transl_table=11 NZ_CP100601.1 RefSeq gene 28303 28449 . + . ID=gene-NLI98_RS00135;Name=NLI98_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00135;old_locus_tag=NLI98_00135 NZ_CP100601.1 Protein Homology CDS 28303 28449 . + 0 ID=cds-WP_032410116.1;Parent=gene-NLI98_RS00135;Dbxref=Genbank:WP_032410116.1;Name=WP_032410116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802513.1;locus_tag=NLI98_RS00135;product=hypothetical protein;protein_id=WP_032410116.1;transl_table=11 NZ_CP100601.1 RefSeq gene 28437 29360 . + . ID=gene-NLI98_RS00140;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=NLI98_RS00140;old_locus_tag=NLI98_00140 NZ_CP100601.1 Protein Homology CDS 28437 29360 . + 0 ID=cds-WP_019725483.1;Parent=gene-NLI98_RS00140;Dbxref=Genbank:WP_019725483.1;Name=WP_019725483.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229551.1;locus_tag=NLI98_RS00140;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_019725483.1;transl_table=11 NZ_CP100601.1 RefSeq gene 29520 30704 . - . ID=gene-NLI98_RS00145;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=NLI98_RS00145;old_locus_tag=NLI98_00145 NZ_CP100601.1 Protein Homology CDS 29520 30704 . - 0 ID=cds-WP_004181587.1;Parent=gene-NLI98_RS00145;Dbxref=Genbank:WP_004181587.1;Name=WP_004181587.1;gbkey=CDS;gene=emrD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229550.1;locus_tag=NLI98_RS00145;product=multidrug efflux MFS transporter EmrD;protein_id=WP_004181587.1;transl_table=11 NZ_CP100601.1 RefSeq gene 30880 31713 . - . ID=gene-NLI98_RS00150;Name=NLI98_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00150;old_locus_tag=NLI98_00150 NZ_CP100601.1 Protein Homology CDS 30880 31713 . - 0 ID=cds-WP_019705396.1;Parent=gene-NLI98_RS00150;Dbxref=Genbank:WP_019705396.1;Name=WP_019705396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229549.1;locus_tag=NLI98_RS00150;product=DMT family transporter;protein_id=WP_019705396.1;transl_table=11 NZ_CP100601.1 RefSeq gene 31782 32228 . - . ID=gene-NLI98_RS00155;Name=NLI98_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00155;old_locus_tag=NLI98_00155 NZ_CP100601.1 Protein Homology CDS 31782 32228 . - 0 ID=cds-WP_002923294.1;Parent=gene-NLI98_RS00155;Dbxref=Genbank:WP_002923294.1;Name=WP_002923294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229548.1;locus_tag=NLI98_RS00155;product=GNAT family N-acetyltransferase;protein_id=WP_002923294.1;transl_table=11 NZ_CP100601.1 RefSeq gene 32319 32438 . - . ID=gene-NLI98_RS00160;Name=tisB;gbkey=Gene;gene=tisB;gene_biotype=protein_coding;locus_tag=NLI98_RS00160;old_locus_tag=NLI98_00160 NZ_CP100601.1 Protein Homology CDS 32319 32438 . - 0 ID=cds-WP_004145059.1;Parent=gene-NLI98_RS00160;Dbxref=Genbank:WP_004145059.1;Name=WP_004145059.1;Ontology_term=GO:0022611,GO:0015075;gbkey=CDS;gene=tisB;go_function=ion transmembrane transporter activity|0015075||IEA;go_process=dormancy process|0022611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229547.1;locus_tag=NLI98_RS00160;product=type I toxin-antitoxin system toxin TisB;protein_id=WP_004145059.1;transl_table=11 NZ_CP100601.1 RefSeq gene 32891 33058 . - . ID=gene-NLI98_RS00165;Name=NLI98_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00165;old_locus_tag=NLI98_00165 NZ_CP100601.1 Protein Homology CDS 32891 33058 . - 0 ID=cds-WP_004150272.1;Parent=gene-NLI98_RS00165;Dbxref=Genbank:WP_004150272.1;Name=WP_004150272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229546.1;locus_tag=NLI98_RS00165;product=hypothetical protein;protein_id=WP_004150272.1;transl_table=11 NZ_CP100601.1 RefSeq gene 33071 33166 . + . ID=gene-NLI98_RS00170;Name=ivbL;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=NLI98_RS00170;old_locus_tag=NLI98_00170 NZ_CP100601.1 Protein Homology CDS 33071 33166 . + 0 ID=cds-WP_002923286.1;Parent=gene-NLI98_RS00170;Dbxref=Genbank:WP_002923286.1;Name=WP_002923286.1;gbkey=CDS;gene=ivbL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002923286.1;locus_tag=NLI98_RS00170;product=ilvB operon leader peptide IvbL;protein_id=WP_002923286.1;transl_table=11 NZ_CP100601.1 RefSeq gene 33271 34959 . + . ID=gene-NLI98_RS00175;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=NLI98_RS00175;old_locus_tag=NLI98_00175 NZ_CP100601.1 Protein Homology CDS 33271 34959 . + 0 ID=cds-WP_064143796.1;Parent=gene-NLI98_RS00175;Dbxref=Genbank:WP_064143796.1;Name=WP_064143796.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462695.1;locus_tag=NLI98_RS00175;product=acetolactate synthase large subunit;protein_id=WP_064143796.1;transl_table=11 NZ_CP100601.1 RefSeq gene 34963 35250 . + . ID=gene-NLI98_RS00180;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=NLI98_RS00180;old_locus_tag=NLI98_00180 NZ_CP100601.1 Protein Homology CDS 34963 35250 . + 0 ID=cds-WP_002923283.1;Parent=gene-NLI98_RS00180;Dbxref=Genbank:WP_002923283.1;Name=WP_002923283.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229544.1;locus_tag=NLI98_RS00180;product=acetolactate synthase small subunit;protein_id=WP_002923283.1;transl_table=11 NZ_CP100601.1 RefSeq gene 35401 35994 . + . ID=gene-NLI98_RS00185;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=NLI98_RS00185;old_locus_tag=NLI98_00185 NZ_CP100601.1 Protein Homology CDS 35401 35994 . + 0 ID=cds-WP_002923282.1;Parent=gene-NLI98_RS00185;Dbxref=Genbank:WP_002923282.1;Name=WP_002923282.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=uhpA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229543.1;locus_tag=NLI98_RS00185;product=transcriptional regulator UhpA;protein_id=WP_002923282.1;transl_table=11 NZ_CP100601.1 RefSeq gene 36012 37493 . + . ID=gene-NLI98_RS00190;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=NLI98_RS00190;old_locus_tag=NLI98_00190 NZ_CP100601.1 Protein Homology CDS 36012 37493 . + 0 ID=cds-WP_020802509.1;Parent=gene-NLI98_RS00190;Dbxref=Genbank:WP_020802509.1;Name=WP_020802509.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=uhpB;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229542.1;locus_tag=NLI98_RS00190;product=signal transduction histidine-protein kinase/phosphatase UhpB;protein_id=WP_020802509.1;transl_table=11 NZ_CP100601.1 RefSeq gene 37505 38833 . + . ID=gene-NLI98_RS00195;Name=NLI98_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00195;old_locus_tag=NLI98_00195 NZ_CP100601.1 Protein Homology CDS 37505 38833 . + 0 ID=cds-WP_004145056.1;Parent=gene-NLI98_RS00195;Dbxref=Genbank:WP_004145056.1;Name=WP_004145056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229541.1;locus_tag=NLI98_RS00195;product=MFS transporter;protein_id=WP_004145056.1;transl_table=11 NZ_CP100601.1 RefSeq gene 38979 40370 . + . ID=gene-NLI98_RS00200;Name=uhpT;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=NLI98_RS00200;old_locus_tag=NLI98_00200 NZ_CP100601.1 Protein Homology CDS 38979 40370 . + 0 ID=cds-WP_002923280.1;Parent=gene-NLI98_RS00200;Dbxref=Genbank:WP_002923280.1;Name=WP_002923280.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229540.1;locus_tag=NLI98_RS00200;product=hexose-6-phosphate:phosphate antiporter;protein_id=WP_002923280.1;transl_table=11 NZ_CP100601.1 RefSeq gene 40507 40959 . + . ID=gene-NLI98_RS00205;Name=NLI98_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00205;old_locus_tag=NLI98_00205 NZ_CP100601.1 Protein Homology CDS 40507 40959 . + 0 ID=cds-WP_004181583.1;Parent=gene-NLI98_RS00205;Dbxref=Genbank:WP_004181583.1;Name=WP_004181583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229539.1;locus_tag=NLI98_RS00205;product=DUF1198 domain-containing protein;protein_id=WP_004181583.1;transl_table=11 NZ_CP100601.1 RefSeq gene 41088 41411 . - . ID=gene-NLI98_RS00210;Name=NLI98_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00210;old_locus_tag=NLI98_00210 NZ_CP100601.1 Protein Homology CDS 41088 41411 . - 0 ID=cds-WP_004173862.1;Parent=gene-NLI98_RS00210;Dbxref=Genbank:WP_004173862.1;Name=WP_004173862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462677.1;locus_tag=NLI98_RS00210;product=DNA-binding transcriptional regulator;protein_id=WP_004173862.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 41395 41756 . - . ID=gene-NLI98_RS00215;Name=NLI98_RS00215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS00215;old_locus_tag=NLI98_00215;pseudo=true NZ_CP100601.1 Protein Homology CDS 41395 41756 . - 0 ID=cds-NLI98_RS00215;Parent=gene-NLI98_RS00215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229537.1;locus_tag=NLI98_RS00215;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 41968 43161 . + . ID=gene-NLI98_RS00220;Name=nepI;gbkey=Gene;gene=nepI;gene_biotype=protein_coding;locus_tag=NLI98_RS00220;old_locus_tag=NLI98_00220 NZ_CP100601.1 Protein Homology CDS 41968 43161 . + 0 ID=cds-WP_088498447.1;Parent=gene-NLI98_RS00220;Dbxref=Genbank:WP_088498447.1;Name=WP_088498447.1;Ontology_term=GO:0015860,GO:0015211,GO:0016020;gbkey=CDS;gene=nepI;go_component=membrane|0016020||IEA;go_function=purine nucleoside transmembrane transporter activity|0015211||IEA;go_process=purine nucleoside transmembrane transport|0015860||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229536.1;locus_tag=NLI98_RS00220;product=purine ribonucleoside efflux pump NepI;protein_id=WP_088498447.1;transl_table=11 NZ_CP100601.1 RefSeq gene 43158 43967 . - . ID=gene-NLI98_RS00225;Name=NLI98_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00225;old_locus_tag=NLI98_00225 NZ_CP100601.1 Protein Homology CDS 43158 43967 . - 0 ID=cds-WP_040146646.1;Parent=gene-NLI98_RS00225;Dbxref=Genbank:WP_040146646.1;Name=WP_040146646.1;Ontology_term=GO:0019700,GO:0050194;gbkey=CDS;go_function=phosphonoacetaldehyde hydrolase activity|0050194||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229535.1;locus_tag=NLI98_RS00225;product=phosphonoacetaldehyde hydrolase;protein_id=WP_040146646.1;transl_table=11 NZ_CP100601.1 RefSeq gene 43977 45080 . - . ID=gene-NLI98_RS00230;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=protein_coding;locus_tag=NLI98_RS00230;old_locus_tag=NLI98_00230 NZ_CP100601.1 Protein Homology CDS 43977 45080 . - 0 ID=cds-WP_088498448.1;Parent=gene-NLI98_RS00230;Dbxref=Genbank:WP_088498448.1;Name=WP_088498448.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229534.1;locus_tag=NLI98_RS00230;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_088498448.1;transl_table=11 NZ_CP100601.1 RefSeq gene 45222 45941 . + . ID=gene-NLI98_RS00235;Name=phnR;gbkey=Gene;gene=phnR;gene_biotype=protein_coding;locus_tag=NLI98_RS00235;old_locus_tag=NLI98_00235 NZ_CP100601.1 Protein Homology CDS 45222 45941 . + 0 ID=cds-WP_004145049.1;Parent=gene-NLI98_RS00235;Dbxref=Genbank:WP_004145049.1;Name=WP_004145049.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=phnR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229533.1;locus_tag=NLI98_RS00235;product=phosphonate utilization transcriptional regulator PhnR;protein_id=WP_004145049.1;transl_table=11 NZ_CP100601.1 RefSeq gene 46119 47132 . + . ID=gene-NLI98_RS00240;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=NLI98_RS00240;old_locus_tag=NLI98_00240 NZ_CP100601.1 Protein Homology CDS 46119 47132 . + 0 ID=cds-WP_064149260.1;Parent=gene-NLI98_RS00240;Dbxref=Genbank:WP_064149260.1;Name=WP_064149260.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229532.1;locus_tag=NLI98_RS00240;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_064149260.1;transl_table=11 NZ_CP100601.1 RefSeq gene 47138 48250 . + . ID=gene-NLI98_RS00245;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=NLI98_RS00245;old_locus_tag=NLI98_00245 NZ_CP100601.1 Protein Homology CDS 47138 48250 . + 0 ID=cds-WP_004150258.1;Parent=gene-NLI98_RS00245;Dbxref=Genbank:WP_004150258.1;Name=WP_004150258.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229531.1;locus_tag=NLI98_RS00245;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_004150258.1;transl_table=11 NZ_CP100601.1 RefSeq gene 48250 49110 . + . ID=gene-NLI98_RS00250;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=NLI98_RS00250;old_locus_tag=NLI98_00250 NZ_CP100601.1 Protein Homology CDS 48250 49110 . + 0 ID=cds-WP_088498449.1;Parent=gene-NLI98_RS00250;Dbxref=Genbank:WP_088498449.1;Name=WP_088498449.1;Ontology_term=GO:0033223,GO:0033225,GO:0005886,GO:0055052;gbkey=CDS;gene=phnU;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229530.1;locus_tag=NLI98_RS00250;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_088498449.1;transl_table=11 NZ_CP100601.1 RefSeq gene 49113 49910 . + . ID=gene-NLI98_RS00255;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=NLI98_RS00255;old_locus_tag=NLI98_00255 NZ_CP100601.1 Protein Homology CDS 49113 49910 . + 0 ID=cds-WP_040088160.1;Parent=gene-NLI98_RS00255;Dbxref=Genbank:WP_040088160.1;Name=WP_040088160.1;Ontology_term=GO:0033223,GO:0033225,GO:0005886,GO:0055052;gbkey=CDS;gene=phnV;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459421.1;locus_tag=NLI98_RS00255;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_040088160.1;transl_table=11 NZ_CP100601.1 RefSeq gene 50222 51601 . - . ID=gene-NLI98_RS00260;Name=NLI98_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00260;old_locus_tag=NLI98_00260 NZ_CP100601.1 Protein Homology CDS 50222 51601 . - 0 ID=cds-WP_040151405.1;Parent=gene-NLI98_RS00260;Dbxref=Genbank:WP_040151405.1;Name=WP_040151405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229527.1;locus_tag=NLI98_RS00260;product=carbohydrate porin;protein_id=WP_040151405.1;transl_table=11 NZ_CP100601.1 RefSeq gene 51746 52048 . - . ID=gene-NLI98_RS00265;Name=NLI98_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00265;old_locus_tag=NLI98_00265 NZ_CP100601.1 Protein Homology CDS 51746 52048 . - 0 ID=cds-WP_002923158.1;Parent=gene-NLI98_RS00265;Dbxref=Genbank:WP_002923158.1;Name=WP_002923158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229526.1;locus_tag=NLI98_RS00265;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_002923158.1;transl_table=11 NZ_CP100601.1 RefSeq gene 52146 53468 . - . ID=gene-NLI98_RS00270;Name=NLI98_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00270;old_locus_tag=NLI98_00270 NZ_CP100601.1 Protein Homology CDS 52146 53468 . - 0 ID=cds-WP_002923156.1;Parent=gene-NLI98_RS00270;Dbxref=Genbank:WP_002923156.1;Name=WP_002923156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229525.1;locus_tag=NLI98_RS00270;product=PTS cellobiose transporter subunit IIC;protein_id=WP_002923156.1;transl_table=11 NZ_CP100601.1 RefSeq gene 53480 53794 . - . ID=gene-NLI98_RS00275;Name=NLI98_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00275;old_locus_tag=NLI98_00275 NZ_CP100601.1 Protein Homology CDS 53480 53794 . - 0 ID=cds-WP_004145041.1;Parent=gene-NLI98_RS00275;Dbxref=Genbank:WP_004145041.1;Name=WP_004145041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229524.1;locus_tag=NLI98_RS00275;product=PTS sugar transporter subunit IIB;protein_id=WP_004145041.1;transl_table=11 NZ_CP100601.1 RefSeq gene 54088 55029 . + . ID=gene-NLI98_RS00280;Name=NLI98_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00280;old_locus_tag=NLI98_00280 NZ_CP100601.1 Protein Homology CDS 54088 55029 . + 0 ID=cds-WP_088498451.1;Parent=gene-NLI98_RS00280;Dbxref=Genbank:WP_088498451.1;Name=WP_088498451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229523.1;locus_tag=NLI98_RS00280;product=LacI family transcriptional regulator;protein_id=WP_088498451.1;transl_table=11 NZ_CP100601.1 RefSeq gene 55241 56611 . + . ID=gene-NLI98_RS00285;Name=NLI98_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00285;old_locus_tag=NLI98_00285 NZ_CP100601.1 Protein Homology CDS 55241 56611 . + 0 ID=cds-WP_002923153.1;Parent=gene-NLI98_RS00285;Dbxref=Genbank:WP_002923153.1;Name=WP_002923153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229522.1;locus_tag=NLI98_RS00285;product=aromatic acid/H+ symport family MFS transporter;protein_id=WP_002923153.1;transl_table=11 NZ_CP100601.1 RefSeq gene 56625 57887 . + . ID=gene-NLI98_RS00290;Name=NLI98_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00290;old_locus_tag=NLI98_00290 NZ_CP100601.1 Protein Homology CDS 56625 57887 . + 0 ID=cds-WP_088498452.1;Parent=gene-NLI98_RS00290;Dbxref=Genbank:WP_088498452.1;Name=WP_088498452.1;Ontology_term=GO:0006725,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229521.1;locus_tag=NLI98_RS00290;product=gallate dioxygenase;protein_id=WP_088498452.1;transl_table=11 NZ_CP100601.1 RefSeq gene 57884 59110 . - . ID=gene-NLI98_RS00295;Name=NLI98_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00295;old_locus_tag=NLI98_00295 NZ_CP100601.1 Protein Homology CDS 57884 59110 . - 0 ID=cds-WP_002923147.1;Parent=gene-NLI98_RS00295;Dbxref=Genbank:WP_002923147.1;Name=WP_002923147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229520.1;locus_tag=NLI98_RS00295;product=LysR family transcriptional regulator;protein_id=WP_002923147.1;transl_table=11 NZ_CP100601.1 RefSeq gene 59238 59978 . + . ID=gene-NLI98_RS00300;Name=galB;gbkey=Gene;gene=galB;gene_biotype=protein_coding;locus_tag=NLI98_RS00300;old_locus_tag=NLI98_00300 NZ_CP100601.1 Protein Homology CDS 59238 59978 . + 0 ID=cds-WP_088498453.1;Parent=gene-NLI98_RS00300;Dbxref=Genbank:WP_088498453.1;Name=WP_088498453.1;gbkey=CDS;gene=galB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229519.1;locus_tag=NLI98_RS00300;product=4-oxalmesaconate hydratase;protein_id=WP_088498453.1;transl_table=11 NZ_CP100601.1 RefSeq gene 59975 60688 . + . ID=gene-NLI98_RS00305;Name=NLI98_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00305;old_locus_tag=NLI98_00305 NZ_CP100601.1 Protein Homology CDS 59975 60688 . + 0 ID=cds-WP_004145036.1;Parent=gene-NLI98_RS00305;Dbxref=Genbank:WP_004145036.1;Name=WP_004145036.1;Ontology_term=GO:0047443;gbkey=CDS;go_function=4-hydroxy-4-methyl-2-oxoglutarate aldolase activity|0047443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229518.1;locus_tag=NLI98_RS00305;product=4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase;protein_id=WP_004145036.1;transl_table=11 NZ_CP100601.1 RefSeq gene 60689 61774 . + . ID=gene-NLI98_RS00310;Name=NLI98_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00310;old_locus_tag=NLI98_00310 NZ_CP100601.1 Protein Homology CDS 60689 61774 . + 0 ID=cds-WP_088498454.1;Parent=gene-NLI98_RS00310;Dbxref=Genbank:WP_088498454.1;Name=WP_088498454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016162004.1;locus_tag=NLI98_RS00310;product=4-oxalomesaconate tautomerase;protein_id=WP_088498454.1;transl_table=11 NZ_CP100601.1 RefSeq gene 61777 62643 . + . ID=gene-NLI98_RS00315;Name=NLI98_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00315;old_locus_tag=NLI98_00315 NZ_CP100601.1 Protein Homology CDS 61777 62643 . + 0 ID=cds-WP_088498455.1;Parent=gene-NLI98_RS00315;Dbxref=Genbank:WP_088498455.1;Name=WP_088498455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831333.1;locus_tag=NLI98_RS00315;product=NAD(P)-dependent oxidoreductase;protein_id=WP_088498455.1;transl_table=11 NZ_CP100601.1 RefSeq gene 62647 62922 . - . ID=gene-NLI98_RS00320;Name=NLI98_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00320;old_locus_tag=NLI98_00320 NZ_CP100601.1 Protein Homology CDS 62647 62922 . - 0 ID=cds-WP_004145033.1;Parent=gene-NLI98_RS00320;Dbxref=Genbank:WP_004145033.1;Name=WP_004145033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229515.1;locus_tag=NLI98_RS00320;product=hypothetical protein;protein_id=WP_004145033.1;transl_table=11 NZ_CP100601.1 RefSeq gene 63044 63982 . - . ID=gene-NLI98_RS00325;Name=NLI98_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00325;old_locus_tag=NLI98_00325 NZ_CP100601.1 Protein Homology CDS 63044 63982 . - 0 ID=cds-WP_004234160.1;Parent=gene-NLI98_RS00325;Dbxref=Genbank:WP_004234160.1;Name=WP_004234160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229514.1;locus_tag=NLI98_RS00325;product=DMT family transporter;protein_id=WP_004234160.1;transl_table=11 NZ_CP100601.1 RefSeq gene 64098 65531 . - . ID=gene-NLI98_RS00330;Name=murP;gbkey=Gene;gene=murP;gene_biotype=protein_coding;locus_tag=NLI98_RS00330;old_locus_tag=NLI98_00330 NZ_CP100601.1 Protein Homology CDS 64098 65531 . - 0 ID=cds-WP_088498456.1;Parent=gene-NLI98_RS00330;Dbxref=Genbank:WP_088498456.1;Name=WP_088498456.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=murP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229513.1;locus_tag=NLI98_RS00330;product=PTS N-acetylmuramic acid transporter subunit IIBC;protein_id=WP_088498456.1;transl_table=11 NZ_CP100601.1 RefSeq gene 65556 66458 . - . ID=gene-NLI98_RS00335;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=NLI98_RS00335;old_locus_tag=NLI98_00335 NZ_CP100601.1 Protein Homology CDS 65556 66458 . - 0 ID=cds-WP_002923109.1;Parent=gene-NLI98_RS00335;Dbxref=Genbank:WP_002923109.1;Name=WP_002923109.1;Ontology_term=GO:0006040,GO:0009254,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229512.1;locus_tag=NLI98_RS00335;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_002923109.1;transl_table=11 NZ_CP100601.1 RefSeq gene 66621 67784 . - . ID=gene-NLI98_RS00340;Name=NLI98_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00340;old_locus_tag=NLI98_00340 NZ_CP100601.1 Protein Homology CDS 66621 67784 . - 0 ID=cds-WP_048988383.1;Parent=gene-NLI98_RS00340;Dbxref=Genbank:WP_048988383.1;Name=WP_048988383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229511.1;locus_tag=NLI98_RS00340;product=multidrug effflux MFS transporter;protein_id=WP_048988383.1;transl_table=11 NZ_CP100601.1 RefSeq gene 67830 69194 . - . ID=gene-NLI98_RS00345;Name=eefC;gbkey=Gene;gene=eefC;gene_biotype=protein_coding;locus_tag=NLI98_RS00345;old_locus_tag=NLI98_00345 NZ_CP100601.1 Protein Homology CDS 67830 69194 . - 0 ID=cds-WP_004186228.1;Parent=gene-NLI98_RS00345;Dbxref=Genbank:WP_004186228.1;Name=WP_004186228.1;gbkey=CDS;gene=eefC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229510.1;locus_tag=NLI98_RS00345;product=multidrug efflux RND transporter outer membrane subunit EefC;protein_id=WP_004186228.1;transl_table=11 NZ_CP100601.1 RefSeq gene 69198 72305 . - . ID=gene-NLI98_RS00350;Name=eefB;gbkey=Gene;gene=eefB;gene_biotype=protein_coding;locus_tag=NLI98_RS00350;old_locus_tag=NLI98_00350 NZ_CP100601.1 Protein Homology CDS 69198 72305 . - 0 ID=cds-WP_088498457.1;Parent=gene-NLI98_RS00350;Dbxref=Genbank:WP_088498457.1;Name=WP_088498457.1;gbkey=CDS;gene=eefB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229509.1;locus_tag=NLI98_RS00350;product=multidrug efflux RND transporter permease subunit EefB;protein_id=WP_088498457.1;transl_table=11 NZ_CP100601.1 RefSeq gene 72305 73429 . - . ID=gene-NLI98_RS00355;Name=eefA;gbkey=Gene;gene=eefA;gene_biotype=protein_coding;locus_tag=NLI98_RS00355;old_locus_tag=NLI98_00355 NZ_CP100601.1 Protein Homology CDS 72305 73429 . - 0 ID=cds-WP_004150241.1;Parent=gene-NLI98_RS00355;Dbxref=Genbank:WP_004150241.1;Name=WP_004150241.1;gbkey=CDS;gene=eefA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077652.1;locus_tag=NLI98_RS00355;product=multidrug efflux RND transporter periplasmic adaptor subunit EefA;protein_id=WP_004150241.1;transl_table=11 NZ_CP100601.1 RefSeq gene 73636 73758 . + . ID=gene-NLI98_RS00360;Name=NLI98_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00360;old_locus_tag=NLI98_00360 NZ_CP100601.1 Protein Homology CDS 73636 73758 . + 0 ID=cds-WP_004150240.1;Parent=gene-NLI98_RS00360;Dbxref=Genbank:WP_004150240.1;Name=WP_004150240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229507.1;locus_tag=NLI98_RS00360;product=hypothetical protein;protein_id=WP_004150240.1;transl_table=11 NZ_CP100601.1 RefSeq gene 73718 73834 . - . ID=gene-NLI98_RS00365;Name=NLI98_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00365;old_locus_tag=NLI98_00365 NZ_CP100601.1 Protein Homology CDS 73718 73834 . - 0 ID=cds-WP_014343452.1;Parent=gene-NLI98_RS00365;Dbxref=Genbank:WP_014343452.1;Name=WP_014343452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229506.1;locus_tag=NLI98_RS00365;product=hypothetical protein;protein_id=WP_014343452.1;transl_table=11 NZ_CP100601.1 RefSeq gene 73809 74225 . + . ID=gene-NLI98_RS00370;Name=NLI98_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00370;old_locus_tag=NLI98_00370 NZ_CP100601.1 Protein Homology CDS 73809 74225 . + 0 ID=cds-WP_088498458.1;Parent=gene-NLI98_RS00370;Dbxref=Genbank:WP_088498458.1;Name=WP_088498458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229505.1;locus_tag=NLI98_RS00370;product=GNAT family N-acetyltransferase;protein_id=WP_088498458.1;transl_table=11 NZ_CP100601.1 RefSeq gene 74847 75494 . - . ID=gene-NLI98_RS00375;Name=NLI98_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00375;old_locus_tag=NLI98_00375 NZ_CP100601.1 Protein Homology CDS 74847 75494 . - 0 ID=cds-WP_019705075.1;Parent=gene-NLI98_RS00375;Dbxref=Genbank:WP_019705075.1;Name=WP_019705075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229503.1;locus_tag=NLI98_RS00375;product=TetR/AcrR family transcriptional regulator;protein_id=WP_019705075.1;transl_table=11 NZ_CP100601.1 RefSeq gene 75575 77068 . + . ID=gene-NLI98_RS00380;Name=NLI98_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00380;old_locus_tag=NLI98_00380 NZ_CP100601.1 Protein Homology CDS 75575 77068 . + 0 ID=cds-WP_088498459.1;Parent=gene-NLI98_RS00380;Dbxref=Genbank:WP_088498459.1;Name=WP_088498459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229502.1;locus_tag=NLI98_RS00380;product=MFS transporter;protein_id=WP_088498459.1;transl_table=11 NZ_CP100601.1 RefSeq gene 77065 78036 . - . ID=gene-NLI98_RS00385;Name=NLI98_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00385;old_locus_tag=NLI98_00385 NZ_CP100601.1 Protein Homology CDS 77065 78036 . - 0 ID=cds-WP_014343450.1;Parent=gene-NLI98_RS00385;Dbxref=Genbank:WP_014343450.1;Name=WP_014343450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229501.1;locus_tag=NLI98_RS00385;product=LysR family transcriptional regulator;protein_id=WP_014343450.1;transl_table=11 NZ_CP100601.1 RefSeq gene 78075 78701 . + . ID=gene-NLI98_RS00390;Name=NLI98_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00390;old_locus_tag=NLI98_00390 NZ_CP100601.1 Protein Homology CDS 78075 78701 . + 0 ID=cds-WP_002923018.1;Parent=gene-NLI98_RS00390;Dbxref=Genbank:WP_002923018.1;Name=WP_002923018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229500.1;locus_tag=NLI98_RS00390;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_002923018.1;transl_table=11 NZ_CP100601.1 RefSeq gene 78704 79174 . + . ID=gene-NLI98_RS00395;Name=NLI98_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00395;old_locus_tag=NLI98_00395 NZ_CP100601.1 Protein Homology CDS 78704 79174 . + 0 ID=cds-WP_004173883.1;Parent=gene-NLI98_RS00395;Dbxref=Genbank:WP_004173883.1;Name=WP_004173883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229499.1;locus_tag=NLI98_RS00395;product=nuclear transport factor 2 family protein;protein_id=WP_004173883.1;transl_table=11 NZ_CP100601.1 RefSeq gene 79195 79731 . - . ID=gene-NLI98_RS00400;Name=NLI98_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00400;old_locus_tag=NLI98_00400 NZ_CP100601.1 Protein Homology CDS 79195 79731 . - 0 ID=cds-WP_004188074.1;Parent=gene-NLI98_RS00400;Dbxref=Genbank:WP_004188074.1;Name=WP_004188074.1;Note=This protein belongs to a clade of uncharacterized proteins related to peroxidases such as the alkylhydroperoxidase AhpD.;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229498.1;locus_tag=NLI98_RS00400;product=peroxidase-related enzyme;protein_id=WP_004188074.1;transl_table=11 NZ_CP100601.1 RefSeq gene 79848 80753 . + . ID=gene-NLI98_RS00405;Name=NLI98_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00405;old_locus_tag=NLI98_00405 NZ_CP100601.1 Protein Homology CDS 79848 80753 . + 0 ID=cds-WP_004150236.1;Parent=gene-NLI98_RS00405;Dbxref=Genbank:WP_004150236.1;Name=WP_004150236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229497.1;locus_tag=NLI98_RS00405;product=AraC family transcriptional regulator;protein_id=WP_004150236.1;transl_table=11 NZ_CP100601.1 RefSeq gene 80881 81690 . + . ID=gene-NLI98_RS00410;Name=nlpA;gbkey=Gene;gene=nlpA;gene_biotype=protein_coding;locus_tag=NLI98_RS00410;old_locus_tag=NLI98_00410 NZ_CP100601.1 Protein Homology CDS 80881 81690 . + 0 ID=cds-WP_004173884.1;Parent=gene-NLI98_RS00410;Dbxref=Genbank:WP_004173884.1;Name=WP_004173884.1;gbkey=CDS;gene=nlpA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229496.1;locus_tag=NLI98_RS00410;product=lipoprotein NlpA;protein_id=WP_004173884.1;transl_table=11 NZ_CP100601.1 RefSeq gene 81715 82569 . + . ID=gene-NLI98_RS00415;Name=NLI98_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00415;old_locus_tag=NLI98_00415 NZ_CP100601.1 Protein Homology CDS 81715 82569 . + 0 ID=cds-WP_002922972.1;Parent=gene-NLI98_RS00415;Dbxref=Genbank:WP_002922972.1;Name=WP_002922972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229495.1;locus_tag=NLI98_RS00415;product=DMT family transporter;protein_id=WP_002922972.1;transl_table=11 NZ_CP100601.1 RefSeq gene 82559 83119 . - . ID=gene-NLI98_RS00420;Name=NLI98_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00420;old_locus_tag=NLI98_00420 NZ_CP100601.1 Protein Homology CDS 82559 83119 . - 0 ID=cds-WP_004181557.1;Parent=gene-NLI98_RS00420;Dbxref=Genbank:WP_004181557.1;Name=WP_004181557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229494.1;locus_tag=NLI98_RS00420;product=NUDIX hydrolase;protein_id=WP_004181557.1;transl_table=11 NZ_CP100601.1 RefSeq gene 83285 84064 . + . ID=gene-NLI98_RS00425;Name=NLI98_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00425;old_locus_tag=NLI98_00425 NZ_CP100601.1 Protein Homology CDS 83285 84064 . + 0 ID=cds-WP_004173886.1;Parent=gene-NLI98_RS00425;Dbxref=Genbank:WP_004173886.1;Name=WP_004173886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229493.1;locus_tag=NLI98_RS00425;product=MBL fold metallo-hydrolase;protein_id=WP_004173886.1;transl_table=11 NZ_CP100601.1 RefSeq gene 84086 85039 . + . ID=gene-NLI98_RS00430;Name=NLI98_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00430;old_locus_tag=NLI98_00430 NZ_CP100601.1 Protein Homology CDS 84086 85039 . + 0 ID=cds-WP_088498460.1;Parent=gene-NLI98_RS00430;Dbxref=Genbank:WP_088498460.1;Name=WP_088498460.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229492.1;locus_tag=NLI98_RS00430;product=helix-turn-helix domain-containing protein;protein_id=WP_088498460.1;transl_table=11 NZ_CP100601.1 RefSeq gene 85036 86085 . - . ID=gene-NLI98_RS00435;Name=NLI98_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00435;old_locus_tag=NLI98_00435 NZ_CP100601.1 Protein Homology CDS 85036 86085 . - 0 ID=cds-WP_002922967.1;Parent=gene-NLI98_RS00435;Dbxref=Genbank:WP_002922967.1;Name=WP_002922967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229491.1;locus_tag=NLI98_RS00435;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_002922967.1;transl_table=11 NZ_CP100601.1 RefSeq gene 86458 87156 . + . ID=gene-NLI98_RS00440;Name=NLI98_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00440;old_locus_tag=NLI98_00440 NZ_CP100601.1 Protein Homology CDS 86458 87156 . + 0 ID=cds-WP_004181554.1;Parent=gene-NLI98_RS00440;Dbxref=Genbank:WP_004181554.1;Name=WP_004181554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229490.1;locus_tag=NLI98_RS00440;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_004181554.1;transl_table=11 NZ_CP100601.1 RefSeq gene 87208 87498 . - . ID=gene-NLI98_RS00445;Name=NLI98_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00445;old_locus_tag=NLI98_00445 NZ_CP100601.1 Protein Homology CDS 87208 87498 . - 0 ID=cds-WP_004889187.1;Parent=gene-NLI98_RS00445;Dbxref=Genbank:WP_004889187.1;Name=WP_004889187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229489.1;locus_tag=NLI98_RS00445;product=antibiotic biosynthesis monooxygenase;protein_id=WP_004889187.1;transl_table=11 NZ_CP100601.1 RefSeq gene 87500 88507 . - . ID=gene-NLI98_RS00450;Name=NLI98_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00450;old_locus_tag=NLI98_00450 NZ_CP100601.1 Protein Homology CDS 87500 88507 . - 0 ID=cds-WP_088498461.1;Parent=gene-NLI98_RS00450;Dbxref=Genbank:WP_088498461.1;Name=WP_088498461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229488.1;locus_tag=NLI98_RS00450;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_088498461.1;transl_table=11 NZ_CP100601.1 RefSeq gene 88620 89087 . - . ID=gene-NLI98_RS00455;Name=NLI98_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00455;old_locus_tag=NLI98_00455 NZ_CP100601.1 Protein Homology CDS 88620 89087 . - 0 ID=cds-WP_002922963.1;Parent=gene-NLI98_RS00455;Dbxref=Genbank:WP_002922963.1;Name=WP_002922963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229487.1;locus_tag=NLI98_RS00455;product=DUF3237 domain-containing protein;protein_id=WP_002922963.1;transl_table=11 NZ_CP100601.1 RefSeq gene 89254 89348 . - . ID=gene-NLI98_RS00460;Name=NLI98_RS00460;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS00460;old_locus_tag=NLI98_00460 NZ_CP100601.1 tRNAscan-SE tRNA 89254 89348 . - . ID=rna-NLI98_RS00460;Parent=gene-NLI98_RS00460;anticodon=(pos:complement(89312..89314));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS00460;product=tRNA-Sec NZ_CP100601.1 tRNAscan-SE exon 89254 89348 . - . ID=exon-NLI98_RS00460-1;Parent=rna-NLI98_RS00460;anticodon=(pos:complement(89312..89314));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS00460;product=tRNA-Sec NZ_CP100601.1 RefSeq gene 89641 91035 . + . ID=gene-NLI98_RS00465;Name=NLI98_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00465;old_locus_tag=NLI98_00465 NZ_CP100601.1 Protein Homology CDS 89641 91035 . + 0 ID=cds-WP_025713946.1;Parent=gene-NLI98_RS00465;Dbxref=Genbank:WP_025713946.1;Name=WP_025713946.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229486.1;locus_tag=NLI98_RS00465;product=glycoside-pentoside-hexuronide family transporter;protein_id=WP_025713946.1;transl_table=11 NZ_CP100601.1 RefSeq gene 91048 93366 . + . ID=gene-NLI98_RS00470;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=protein_coding;locus_tag=NLI98_RS00470;old_locus_tag=NLI98_00470 NZ_CP100601.1 Protein Homology CDS 91048 93366 . + 0 ID=cds-WP_065519066.1;Parent=gene-NLI98_RS00470;Dbxref=Genbank:WP_065519066.1;Name=WP_065519066.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229485.1;locus_tag=NLI98_RS00470;product=alpha-xylosidase;protein_id=WP_065519066.1;transl_table=11 NZ_CP100601.1 RefSeq gene 93522 94244 . + . ID=gene-NLI98_RS00475;Name=NLI98_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00475;old_locus_tag=NLI98_00475 NZ_CP100601.1 Protein Homology CDS 93522 94244 . + 0 ID=cds-WP_004889196.1;Parent=gene-NLI98_RS00475;Dbxref=Genbank:WP_004889196.1;Name=WP_004889196.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229484.1;locus_tag=NLI98_RS00475;product=SIS domain-containing protein;protein_id=WP_004889196.1;transl_table=11 NZ_CP100601.1 RefSeq gene 94291 95670 . - . ID=gene-NLI98_RS00480;Name=NLI98_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00480;old_locus_tag=NLI98_00480 NZ_CP100601.1 Protein Homology CDS 94291 95670 . - 0 ID=cds-WP_064152535.1;Parent=gene-NLI98_RS00480;Dbxref=Genbank:WP_064152535.1;Name=WP_064152535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229483.1;locus_tag=NLI98_RS00480;product=glycoside hydrolase;protein_id=WP_064152535.1;transl_table=11 NZ_CP100601.1 RefSeq gene 95683 97242 . - . ID=gene-NLI98_RS00485;Name=NLI98_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00485;old_locus_tag=NLI98_00485 NZ_CP100601.1 Protein Homology CDS 95683 97242 . - 0 ID=cds-WP_088498462.1;Parent=gene-NLI98_RS00485;Dbxref=Genbank:WP_088498462.1;Name=WP_088498462.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229482.1;locus_tag=NLI98_RS00485;product=PTS transporter subunit EIIC;protein_id=WP_088498462.1;transl_table=11 NZ_CP100601.1 RefSeq gene 97488 99203 . - . ID=gene-NLI98_RS00490;Name=NLI98_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00490;old_locus_tag=NLI98_00490 NZ_CP100601.1 Protein Homology CDS 97488 99203 . - 0 ID=cds-WP_004901441.1;Parent=gene-NLI98_RS00490;Dbxref=Genbank:WP_004901441.1;Name=WP_004901441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229481.1;locus_tag=NLI98_RS00490;product=AsmA family protein;protein_id=WP_004901441.1;transl_table=11 NZ_CP100601.1 RefSeq gene 99344 100735 . - . ID=gene-NLI98_RS00495;Name=NLI98_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00495;old_locus_tag=NLI98_00495 NZ_CP100601.1 Protein Homology CDS 99344 100735 . - 0 ID=cds-WP_002922950.1;Parent=gene-NLI98_RS00495;Dbxref=Genbank:WP_002922950.1;Name=WP_002922950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229480.1;locus_tag=NLI98_RS00495;product=uracil-xanthine permease family protein;protein_id=WP_002922950.1;transl_table=11 NZ_CP100601.1 RefSeq gene 101020 102222 . + . ID=gene-NLI98_RS00500;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=NLI98_RS00500;old_locus_tag=NLI98_00500 NZ_CP100601.1 Protein Homology CDS 101020 102222 . + 0 ID=cds-WP_002922948.1;Parent=gene-NLI98_RS00500;Dbxref=Genbank:WP_002922948.1;Name=WP_002922948.1;Ontology_term=GO:0015813,GO:0015501;gbkey=CDS;gene=gltS;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229478.1;locus_tag=NLI98_RS00500;product=sodium/glutamate symporter;protein_id=WP_002922948.1;transl_table=11 NZ_CP100601.1 RefSeq gene 102337 103848 . - . ID=gene-NLI98_RS00505;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=NLI98_RS00505;old_locus_tag=NLI98_00505 NZ_CP100601.1 Protein Homology CDS 102337 103848 . - 0 ID=cds-WP_002922944.1;Parent=gene-NLI98_RS00505;Dbxref=Genbank:WP_002922944.1;Name=WP_002922944.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229477.1;locus_tag=NLI98_RS00505;product=glycerol kinase GlpK;protein_id=WP_002922944.1;transl_table=11 NZ_CP100601.1 RefSeq gene 103870 104721 . - . ID=gene-NLI98_RS00510;Name=NLI98_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00510;old_locus_tag=NLI98_00510 NZ_CP100601.1 Protein Homology CDS 103870 104721 . - 0 ID=cds-WP_002922941.1;Parent=gene-NLI98_RS00510;Dbxref=Genbank:WP_002922941.1;Name=WP_002922941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229476.1;locus_tag=NLI98_RS00510;product=aquaporin;protein_id=WP_002922941.1;transl_table=11 NZ_CP100601.1 RefSeq gene 105164 105409 . + . ID=gene-NLI98_RS00515;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=NLI98_RS00515;old_locus_tag=NLI98_00515 NZ_CP100601.1 Protein Homology CDS 105164 105409 . + 0 ID=cds-WP_004150222.1;Parent=gene-NLI98_RS00515;Dbxref=Genbank:WP_004150222.1;Name=WP_004150222.1;gbkey=CDS;gene=zapB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418363.1;locus_tag=NLI98_RS00515;product=septal ring assembly protein ZapB;protein_id=WP_004150222.1;transl_table=11 NZ_CP100601.1 RefSeq gene 105561 106550 . + . ID=gene-NLI98_RS00520;Name=NLI98_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00520;old_locus_tag=NLI98_00520 NZ_CP100601.1 Protein Homology CDS 105561 106550 . + 0 ID=cds-WP_002922936.1;Parent=gene-NLI98_RS00520;Dbxref=Genbank:WP_002922936.1;Name=WP_002922936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1;locus_tag=NLI98_RS00520;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_002922936.1;transl_table=11 NZ_CP100601.1 RefSeq gene 106713 107483 . + . ID=gene-NLI98_RS00525;Name=NLI98_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00525;old_locus_tag=NLI98_00525 NZ_CP100601.1 Protein Homology CDS 106713 107483 . + 0 ID=cds-WP_020324206.1;Parent=gene-NLI98_RS00525;Dbxref=Genbank:WP_020324206.1;Name=WP_020324206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229473.1;locus_tag=NLI98_RS00525;product=CDP-diacylglycerol diphosphatase;protein_id=WP_020324206.1;transl_table=11 NZ_CP100601.1 RefSeq gene 107548 108852 . + . ID=gene-NLI98_RS00530;Name=NLI98_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00530;old_locus_tag=NLI98_00530 NZ_CP100601.1 Protein Homology CDS 107548 108852 . + 0 ID=cds-WP_023317371.1;Parent=gene-NLI98_RS00530;Dbxref=Genbank:WP_023317371.1;Name=WP_023317371.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229472.1;locus_tag=NLI98_RS00530;product=SLC13 family permease;protein_id=WP_023317371.1;transl_table=11 NZ_CP100601.1 RefSeq gene 108945 109712 . - . ID=gene-NLI98_RS00535;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=NLI98_RS00535;old_locus_tag=NLI98_00535 NZ_CP100601.1 Protein Homology CDS 108945 109712 . - 0 ID=cds-WP_002922909.1;Parent=gene-NLI98_RS00535;Dbxref=Genbank:WP_002922909.1;Name=WP_002922909.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229471.1;locus_tag=NLI98_RS00535;product=triose-phosphate isomerase;protein_id=WP_002922909.1;transl_table=11 NZ_CP100601.1 RefSeq gene 109822 110424 . - . ID=gene-NLI98_RS00540;Name=NLI98_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00540;old_locus_tag=NLI98_00540 NZ_CP100601.1 Protein Homology CDS 109822 110424 . - 0 ID=cds-WP_002922908.1;Parent=gene-NLI98_RS00540;Dbxref=Genbank:WP_002922908.1;Name=WP_002922908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229470.1;locus_tag=NLI98_RS00540;product=YiiQ family protein;protein_id=WP_002922908.1;transl_table=11 NZ_CP100601.1 RefSeq gene 110537 110965 . + . ID=gene-NLI98_RS00545;Name=NLI98_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00545;old_locus_tag=NLI98_00545 NZ_CP100601.1 Protein Homology CDS 110537 110965 . + 0 ID=cds-WP_004901418.1;Parent=gene-NLI98_RS00545;Dbxref=Genbank:WP_004901418.1;Name=WP_004901418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229469.1;locus_tag=NLI98_RS00545;product=DUF805 domain-containing protein;protein_id=WP_004901418.1;transl_table=11 NZ_CP100601.1 RefSeq gene 110966 111712 . - . ID=gene-NLI98_RS00550;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=NLI98_RS00550;old_locus_tag=NLI98_00550 NZ_CP100601.1 Protein Homology CDS 110966 111712 . - 0 ID=cds-WP_004173895.1;Parent=gene-NLI98_RS00550;Dbxref=Genbank:WP_004173895.1;Name=WP_004173895.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229468.1;locus_tag=NLI98_RS00550;product=ferredoxin--NADP(+) reductase;protein_id=WP_004173895.1;transl_table=11 NZ_CP100601.1 RefSeq gene 111863 112873 . - . ID=gene-NLI98_RS00555;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=NLI98_RS00555;old_locus_tag=NLI98_00555 NZ_CP100601.1 Protein Homology CDS 111863 112873 . - 0 ID=cds-WP_002922903.1;Parent=gene-NLI98_RS00555;Dbxref=Genbank:WP_002922903.1;Name=WP_002922903.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229467.1;locus_tag=NLI98_RS00555;product=class II fructose-bisphosphatase;protein_id=WP_002922903.1;transl_table=11 NZ_CP100601.1 RefSeq gene 112922 115003 . - . ID=gene-NLI98_RS00560;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=NLI98_RS00560;old_locus_tag=NLI98_00560 NZ_CP100601.1 Protein Homology CDS 112922 115003 . - 0 ID=cds-WP_004889209.1;Parent=gene-NLI98_RS00560;Dbxref=Genbank:WP_004889209.1;Name=WP_004889209.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229466.1;locus_tag=NLI98_RS00560;product=ATP-dependent DNA helicase RecG;protein_id=WP_004889209.1;transl_table=11 NZ_CP100601.1 RefSeq gene 115009 115698 . - . ID=gene-NLI98_RS00565;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=NLI98_RS00565;old_locus_tag=NLI98_00565 NZ_CP100601.1 Protein Homology CDS 115009 115698 . - 0 ID=cds-WP_004181538.1;Parent=gene-NLI98_RS00565;Dbxref=Genbank:WP_004181538.1;Name=WP_004181538.1;Ontology_term=GO:0030488,GO:0008173,GO:0009020;gbkey=CDS;gene=trmH;go_function=RNA methyltransferase activity|0008173||IEA,tRNA (guanosine-2'-O-)-methyltransferase activity|0009020||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229465.1;locus_tag=NLI98_RS00565;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_004181538.1;transl_table=11 NZ_CP100601.1 RefSeq gene 115703 117823 . - . ID=gene-NLI98_RS00570;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=NLI98_RS00570;old_locus_tag=NLI98_00570 NZ_CP100601.1 Protein Homology CDS 115703 117823 . - 0 ID=cds-WP_004150214.1;Parent=gene-NLI98_RS00570;Dbxref=Genbank:WP_004150214.1;Name=WP_004150214.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229464.1;locus_tag=NLI98_RS00570;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_004150214.1;transl_table=11 NZ_CP100601.1 RefSeq gene 117842 118117 . - . ID=gene-NLI98_RS00575;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=NLI98_RS00575;old_locus_tag=NLI98_00575 NZ_CP100601.1 Protein Homology CDS 117842 118117 . - 0 ID=cds-WP_000135058.1;Parent=gene-NLI98_RS00575;Dbxref=Genbank:WP_000135058.1;Name=WP_000135058.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=NLI98_RS00575;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_000135058.1;transl_table=11 NZ_CP100601.1 RefSeq gene 118172 118795 . - . ID=gene-NLI98_RS00580;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=NLI98_RS00580;old_locus_tag=NLI98_00580 NZ_CP100601.1 Protein Homology CDS 118172 118795 . - 0 ID=cds-WP_002922664.1;Parent=gene-NLI98_RS00580;Dbxref=Genbank:WP_002922664.1;Name=WP_002922664.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=NLI98_RS00580;product=guanylate kinase;protein_id=WP_002922664.1;transl_table=11 NZ_CP100601.1 RefSeq gene 119054 120730 . + . ID=gene-NLI98_RS00585;Name=ligB;gbkey=Gene;gene=ligB;gene_biotype=protein_coding;locus_tag=NLI98_RS00585;old_locus_tag=NLI98_00585 NZ_CP100601.1 Protein Homology CDS 119054 120730 . + 0 ID=cds-WP_088498463.1;Parent=gene-NLI98_RS00585;Dbxref=Genbank:WP_088498463.1;Name=WP_088498463.1;Ontology_term=GO:0006260,GO:0006281,GO:0003911;gbkey=CDS;gene=ligB;go_function=DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229461.1;locus_tag=NLI98_RS00585;product=NAD-dependent DNA ligase LigB;protein_id=WP_088498463.1;transl_table=11 NZ_CP100601.1 RefSeq gene 120736 121353 . - . ID=gene-NLI98_RS00590;Name=NLI98_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00590;old_locus_tag=NLI98_00590 NZ_CP100601.1 Protein Homology CDS 120736 121353 . - 0 ID=cds-WP_002922654.1;Parent=gene-NLI98_RS00590;Dbxref=Genbank:WP_002922654.1;Name=WP_002922654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229460.1;locus_tag=NLI98_RS00590;product=trimeric intracellular cation channel family protein;protein_id=WP_002922654.1;transl_table=11 NZ_CP100601.1 RefSeq gene 121629 122879 . + . ID=gene-NLI98_RS00595;Name=NLI98_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00595;old_locus_tag=NLI98_00595 NZ_CP100601.1 Protein Homology CDS 121629 122879 . + 0 ID=cds-WP_088498464.1;Parent=gene-NLI98_RS00595;Dbxref=Genbank:WP_088498464.1;Name=WP_088498464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229459.1;locus_tag=NLI98_RS00595;product=chloride channel protein;protein_id=WP_088498464.1;transl_table=11 NZ_CP100601.1 RefSeq gene 122935 123993 . - . ID=gene-NLI98_RS00600;Name=NLI98_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00600;old_locus_tag=NLI98_00600 NZ_CP100601.1 Protein Homology CDS 122935 123993 . - 0 ID=cds-WP_004151500.1;Parent=gene-NLI98_RS00600;Dbxref=Genbank:WP_004151500.1;Name=WP_004151500.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229458.1;locus_tag=NLI98_RS00600;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_004151500.1;transl_table=11 NZ_CP100601.1 RefSeq gene 123996 124742 . - . ID=gene-NLI98_RS00605;Name=NLI98_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00605;old_locus_tag=NLI98_00605 NZ_CP100601.1 Protein Homology CDS 123996 124742 . - 0 ID=cds-WP_017879935.1;Parent=gene-NLI98_RS00605;Dbxref=Genbank:WP_017879935.1;Name=WP_017879935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229457.1;locus_tag=NLI98_RS00605;product=isocitrate lyase/phosphoenolpyruvate mutase family protein;protein_id=WP_017879935.1;transl_table=11 NZ_CP100601.1 RefSeq gene 124925 125788 . - . ID=gene-NLI98_RS00610;Name=NLI98_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00610;old_locus_tag=NLI98_00610 NZ_CP100601.1 Protein Homology CDS 124925 125788 . - 0 ID=cds-WP_002922636.1;Parent=gene-NLI98_RS00610;Dbxref=Genbank:WP_002922636.1;Name=WP_002922636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1;locus_tag=NLI98_RS00610;product=YicC family protein;protein_id=WP_002922636.1;transl_table=11 NZ_CP100601.1 RefSeq gene 126288 127988 . + . ID=gene-NLI98_RS00615;Name=NLI98_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00615;old_locus_tag=NLI98_00615 NZ_CP100601.1 Protein Homology CDS 126288 127988 . + 0 ID=cds-WP_004889226.1;Parent=gene-NLI98_RS00615;Dbxref=Genbank:WP_004889226.1;Name=WP_004889226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229453.1;locus_tag=NLI98_RS00615;product=lysophospholipid acyltransferase family protein;protein_id=WP_004889226.1;transl_table=11 NZ_CP100601.1 RefSeq gene 128026 128157 . - . ID=gene-NLI98_RS00620;Name=NLI98_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00620;old_locus_tag=NLI98_00620 NZ_CP100601.1 Protein Homology CDS 128026 128157 . - 0 ID=cds-WP_072217428.1;Parent=gene-NLI98_RS00620;Dbxref=Genbank:WP_072217428.1;Name=WP_072217428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229452.1;locus_tag=NLI98_RS00620;product=hypothetical protein;protein_id=WP_072217428.1;transl_table=11 NZ_CP100601.1 RefSeq gene 128156 129043 . + . ID=gene-NLI98_RS00625;Name=NLI98_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00625;old_locus_tag=NLI98_00625 NZ_CP100601.1 Protein Homology CDS 128156 129043 . + 0 ID=cds-WP_020316982.1;Parent=gene-NLI98_RS00625;Dbxref=Genbank:WP_020316982.1;Name=WP_020316982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229451.1;locus_tag=NLI98_RS00625;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_020316982.1;transl_table=11 NZ_CP100601.1 RefSeq gene 129036 129953 . + . ID=gene-NLI98_RS00630;Name=NLI98_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00630;old_locus_tag=NLI98_00630 NZ_CP100601.1 Protein Homology CDS 129036 129953 . + 0 ID=cds-WP_004173902.1;Parent=gene-NLI98_RS00630;Dbxref=Genbank:WP_004173902.1;Name=WP_004173902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540304.1;locus_tag=NLI98_RS00630;product=ABC transporter ATP-binding protein;protein_id=WP_004173902.1;transl_table=11 NZ_CP100601.1 RefSeq gene 129985 131079 . + . ID=gene-NLI98_RS00635;Name=NLI98_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00635;old_locus_tag=NLI98_00635 NZ_CP100601.1 Protein Homology CDS 129985 131079 . + 0 ID=cds-WP_023284394.1;Parent=gene-NLI98_RS00635;Dbxref=Genbank:WP_023284394.1;Name=WP_023284394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229447.1;locus_tag=NLI98_RS00635;product=ABC transporter permease;protein_id=WP_023284394.1;transl_table=11 NZ_CP100601.1 RefSeq gene 131176 131892 . + . ID=gene-NLI98_RS00640;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=NLI98_RS00640;old_locus_tag=NLI98_00640 NZ_CP100601.1 Protein Homology CDS 131176 131892 . + 0 ID=cds-WP_002922602.1;Parent=gene-NLI98_RS00640;Dbxref=Genbank:WP_002922602.1;Name=WP_002922602.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006803115.1;locus_tag=NLI98_RS00640;product=ribonuclease PH;protein_id=WP_002922602.1;transl_table=11 NZ_CP100601.1 RefSeq gene 132003 132644 . + . ID=gene-NLI98_RS00645;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=NLI98_RS00645;old_locus_tag=NLI98_00645 NZ_CP100601.1 Protein Homology CDS 132003 132644 . + 0 ID=cds-WP_004173904.1;Parent=gene-NLI98_RS00645;Dbxref=Genbank:WP_004173904.1;Name=WP_004173904.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229445.1;locus_tag=NLI98_RS00645;product=orotate phosphoribosyltransferase;protein_id=WP_004173904.1;transl_table=11 NZ_CP100601.1 RefSeq gene 132680 133696 . - . ID=gene-NLI98_RS00650;Name=NLI98_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00650;old_locus_tag=NLI98_00650 NZ_CP100601.1 Protein Homology CDS 132680 133696 . - 0 ID=cds-WP_088498465.1;Parent=gene-NLI98_RS00650;Dbxref=Genbank:WP_088498465.1;Name=WP_088498465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806830.1;locus_tag=NLI98_RS00650;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_088498465.1;transl_table=11 NZ_CP100601.1 RefSeq gene 133872 134468 . - . ID=gene-NLI98_RS00655;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=NLI98_RS00655;old_locus_tag=NLI98_00655 NZ_CP100601.1 Protein Homology CDS 133872 134468 . - 0 ID=cds-WP_002922598.1;Parent=gene-NLI98_RS00655;Dbxref=Genbank:WP_002922598.1;Name=WP_002922598.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000818604.1;locus_tag=NLI98_RS00655;product=nucleoid occlusion factor SlmA;protein_id=WP_002922598.1;transl_table=11 NZ_CP100601.1 RefSeq gene 134593 135051 . - . ID=gene-NLI98_RS00660;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=NLI98_RS00660;old_locus_tag=NLI98_00660 NZ_CP100601.1 Protein Homology CDS 134593 135051 . - 0 ID=cds-WP_004145270.1;Parent=gene-NLI98_RS00660;Dbxref=Genbank:WP_004145270.1;Name=WP_004145270.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=NLI98_RS00660;product=dUTP diphosphatase;protein_id=WP_004145270.1;transl_table=11 NZ_CP100601.1 RefSeq gene 135029 136243 . - . ID=gene-NLI98_RS00665;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=NLI98_RS00665;old_locus_tag=NLI98_00665 NZ_CP100601.1 Protein Homology CDS 135029 136243 . - 0 ID=cds-WP_004188117.1;Parent=gene-NLI98_RS00665;Dbxref=Genbank:WP_004188117.1;Name=WP_004188117.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418096.4;locus_tag=NLI98_RS00665;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_004188117.1;transl_table=11 NZ_CP100601.1 RefSeq gene 136416 137081 . + . ID=gene-NLI98_RS00670;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=NLI98_RS00670;old_locus_tag=NLI98_00670 NZ_CP100601.1 Protein Homology CDS 136416 137081 . + 0 ID=cds-WP_002922589.1;Parent=gene-NLI98_RS00670;Dbxref=Genbank:WP_002922589.1;Name=WP_002922589.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229441.1;locus_tag=NLI98_RS00670;product=DNA repair protein RadC;protein_id=WP_002922589.1;transl_table=11 NZ_CP100601.1 RefSeq gene 137298 137534 . + . ID=gene-NLI98_RS00675;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=NLI98_RS00675;old_locus_tag=NLI98_00675 NZ_CP100601.1 Protein Homology CDS 137298 137534 . + 0 ID=cds-WP_000091955.1;Parent=gene-NLI98_RS00675;Dbxref=Genbank:WP_000091955.1;Name=WP_000091955.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=NLI98_RS00675;product=50S ribosomal protein L28;protein_id=WP_000091955.1;transl_table=11 NZ_CP100601.1 RefSeq gene 137555 137722 . + . ID=gene-NLI98_RS00680;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=NLI98_RS00680;old_locus_tag=NLI98_00680 NZ_CP100601.1 Protein Homology CDS 137555 137722 . + 0 ID=cds-WP_002922510.1;Parent=gene-NLI98_RS00680;Dbxref=Genbank:WP_002922510.1;Name=WP_002922510.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=NLI98_RS00680;product=50S ribosomal protein L33;protein_id=WP_002922510.1;transl_table=11 NZ_CP100601.1 RefSeq gene 137858 138667 . + . ID=gene-NLI98_RS00685;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=NLI98_RS00685;old_locus_tag=NLI98_00685 NZ_CP100601.1 Protein Homology CDS 137858 138667 . + 0 ID=cds-WP_004173907.1;Parent=gene-NLI98_RS00685;Dbxref=Genbank:WP_004173907.1;Name=WP_004173907.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229438.1;locus_tag=NLI98_RS00685;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_004173907.1;transl_table=11 NZ_CP100601.1 RefSeq gene 138856 139335 . - . ID=gene-NLI98_RS00690;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=NLI98_RS00690;old_locus_tag=NLI98_00690 NZ_CP100601.1 Protein Homology CDS 138856 139335 . - 0 ID=cds-WP_002922501.1;Parent=gene-NLI98_RS00690;Dbxref=Genbank:WP_002922501.1;Name=WP_002922501.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229437.1;locus_tag=NLI98_RS00690;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_002922501.1;transl_table=11 NZ_CP100601.1 RefSeq gene 139332 140108 . - . ID=gene-NLI98_RS00695;Name=NLI98_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00695;old_locus_tag=NLI98_00695 NZ_CP100601.1 Protein Homology CDS 139332 140108 . - 0 ID=cds-WP_004145264.1;Parent=gene-NLI98_RS00695;Dbxref=Genbank:WP_004145264.1;Name=WP_004145264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229436.1;locus_tag=NLI98_RS00695;product=glycosyltransferase family 2 protein;protein_id=WP_004145264.1;transl_table=11 NZ_CP100601.1 RefSeq gene 140108 141382 . - . ID=gene-NLI98_RS00700;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=NLI98_RS00700;old_locus_tag=NLI98_00700 NZ_CP100601.1 Protein Homology CDS 140108 141382 . - 0 ID=cds-WP_004145263.1;Parent=gene-NLI98_RS00700;Dbxref=Genbank:WP_004145263.1;Name=WP_004145263.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229435.1;locus_tag=NLI98_RS00700;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_004145263.1;transl_table=11 NZ_CP100601.1 RefSeq gene 141474 142463 . - . ID=gene-NLI98_RS00705;Name=NLI98_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00705;old_locus_tag=NLI98_00705 NZ_CP100601.1 Protein Homology CDS 141474 142463 . - 0 ID=cds-WP_088498466.1;Parent=gene-NLI98_RS00705;Dbxref=Genbank:WP_088498466.1;Name=WP_088498466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229434.1;locus_tag=NLI98_RS00705;product=glycosyltransferase;protein_id=WP_088498466.1;transl_table=11 NZ_CP100601.1 RefSeq gene 142493 143587 . - . ID=gene-NLI98_RS00710;Name=NLI98_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00710;old_locus_tag=NLI98_00710 NZ_CP100601.1 Protein Homology CDS 142493 143587 . - 0 ID=cds-WP_004145262.1;Parent=gene-NLI98_RS00710;Dbxref=Genbank:WP_004145262.1;Name=WP_004145262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229433.1;locus_tag=NLI98_RS00710;product=glycosyltransferase;protein_id=WP_004145262.1;transl_table=11 NZ_CP100601.1 RefSeq gene 143590 144717 . - . ID=gene-NLI98_RS00715;Name=NLI98_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00715;old_locus_tag=NLI98_00715 NZ_CP100601.1 Protein Homology CDS 143590 144717 . - 0 ID=cds-WP_004889250.1;Parent=gene-NLI98_RS00715;Dbxref=Genbank:WP_004889250.1;Name=WP_004889250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229432.1;locus_tag=NLI98_RS00715;product=glycosyltransferase family 4 protein;protein_id=WP_004889250.1;transl_table=11 NZ_CP100601.1 RefSeq gene 144714 145790 . - . ID=gene-NLI98_RS00720;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=NLI98_RS00720;old_locus_tag=NLI98_00720 NZ_CP100601.1 Protein Homology CDS 144714 145790 . - 0 ID=cds-WP_004181527.1;Parent=gene-NLI98_RS00720;Dbxref=Genbank:WP_004181527.1;Name=WP_004181527.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229431.1;locus_tag=NLI98_RS00720;product=putative lipopolysaccharide heptosyltransferase III;protein_id=WP_004181527.1;transl_table=11 NZ_CP100601.1 RefSeq gene 145902 146855 . + . ID=gene-NLI98_RS00725;Name=NLI98_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00725;old_locus_tag=NLI98_00725 NZ_CP100601.1 Protein Homology CDS 145902 146855 . + 0 ID=cds-WP_088498467.1;Parent=gene-NLI98_RS00725;Dbxref=Genbank:WP_088498467.1;Name=WP_088498467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229430.1;locus_tag=NLI98_RS00725;product=polysaccharide deacetylase family protein;protein_id=WP_088498467.1;transl_table=11 NZ_CP100601.1 RefSeq gene 146856 147839 . - . ID=gene-NLI98_RS00730;Name=NLI98_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00730;old_locus_tag=NLI98_00730 NZ_CP100601.1 Protein Homology CDS 146856 147839 . - 0 ID=cds-WP_016529888.1;Parent=gene-NLI98_RS00730;Dbxref=Genbank:WP_016529888.1;Name=WP_016529888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529888.1;locus_tag=NLI98_RS00730;product=glycosyltransferase;protein_id=WP_016529888.1;transl_table=11 NZ_CP100601.1 RefSeq gene 147832 149082 . - . ID=gene-NLI98_RS00735;Name=NLI98_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00735;old_locus_tag=NLI98_00735 NZ_CP100601.1 Protein Homology CDS 147832 149082 . - 0 ID=cds-WP_004901359.1;Parent=gene-NLI98_RS00735;Dbxref=Genbank:WP_004901359.1;Name=WP_004901359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004901359.1;locus_tag=NLI98_RS00735;product=O-antigen ligase family protein;protein_id=WP_004901359.1;transl_table=11 NZ_CP100601.1 RefSeq gene 149066 150238 . - . ID=gene-NLI98_RS00740;Name=NLI98_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00740;old_locus_tag=NLI98_00740 NZ_CP100601.1 Protein Homology CDS 149066 150238 . - 0 ID=cds-WP_004901358.1;Parent=gene-NLI98_RS00740;Dbxref=Genbank:WP_004901358.1;Name=WP_004901358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529889.1;locus_tag=NLI98_RS00740;product=glycosyltransferase;protein_id=WP_004901358.1;transl_table=11 NZ_CP100601.1 RefSeq gene 150238 151200 . - . ID=gene-NLI98_RS00745;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=NLI98_RS00745;old_locus_tag=NLI98_00745 NZ_CP100601.1 Protein Homology CDS 150238 151200 . - 0 ID=cds-WP_070984930.1;Parent=gene-NLI98_RS00745;Dbxref=Genbank:WP_070984930.1;Name=WP_070984930.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004901354.1;locus_tag=NLI98_RS00745;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_070984930.1;transl_table=11 NZ_CP100601.1 RefSeq gene 151204 152262 . - . ID=gene-NLI98_RS00750;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=NLI98_RS00750;old_locus_tag=NLI98_00750 NZ_CP100601.1 Protein Homology CDS 151204 152262 . - 0 ID=cds-WP_088498469.1;Parent=gene-NLI98_RS00750;Dbxref=Genbank:WP_088498469.1;Name=WP_088498469.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540314.1;locus_tag=NLI98_RS00750;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_088498469.1;transl_table=11 NZ_CP100601.1 RefSeq gene 152272 153204 . - . ID=gene-NLI98_RS00755;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=NLI98_RS00755;old_locus_tag=NLI98_00755 NZ_CP100601.1 Protein Homology CDS 152272 153204 . - 0 ID=cds-WP_002922463.1;Parent=gene-NLI98_RS00755;Dbxref=Genbank:WP_002922463.1;Name=WP_002922463.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233050.1;locus_tag=NLI98_RS00755;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_002922463.1;transl_table=11 NZ_CP100601.1 RefSeq gene 153418 154611 . + . ID=gene-NLI98_RS00760;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=NLI98_RS00760;old_locus_tag=NLI98_00760 NZ_CP100601.1 Protein Homology CDS 153418 154611 . + 0 ID=cds-WP_002922462.1;Parent=gene-NLI98_RS00760;Dbxref=Genbank:WP_002922462.1;Name=WP_002922462.1;Ontology_term=GO:0006567,GO:0008890;gbkey=CDS;gene=kbl;go_function=glycine C-acetyltransferase activity|0008890||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229421.1;locus_tag=NLI98_RS00760;product=glycine C-acetyltransferase;protein_id=WP_002922462.1;transl_table=11 NZ_CP100601.1 RefSeq gene 154624 155649 . + . ID=gene-NLI98_RS00765;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=NLI98_RS00765;old_locus_tag=NLI98_00765 NZ_CP100601.1 Protein Homology CDS 154624 155649 . + 0 ID=cds-WP_002922461.1;Parent=gene-NLI98_RS00765;Dbxref=Genbank:WP_002922461.1;Name=WP_002922461.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120462.1;locus_tag=NLI98_RS00765;product=L-threonine 3-dehydrogenase;protein_id=WP_002922461.1;transl_table=11 NZ_CP100601.1 RefSeq gene 155818 156606 . + . ID=gene-NLI98_RS00770;Name=NLI98_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00770;old_locus_tag=NLI98_00770 NZ_CP100601.1 Protein Homology CDS 155818 156606 . + 0 ID=cds-WP_002922460.1;Parent=gene-NLI98_RS00770;Dbxref=Genbank:WP_002922460.1;Name=WP_002922460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540315.1;locus_tag=NLI98_RS00770;product=glycosyltransferase family 2 protein;protein_id=WP_002922460.1;transl_table=11 NZ_CP100601.1 RefSeq gene 156612 157559 . - . ID=gene-NLI98_RS00775;Name=NLI98_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00775;old_locus_tag=NLI98_00775 NZ_CP100601.1 Protein Homology CDS 156612 157559 . - 0 ID=cds-WP_002922459.1;Parent=gene-NLI98_RS00775;Dbxref=Genbank:WP_002922459.1;Name=WP_002922459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229418.1;locus_tag=NLI98_RS00775;product=divergent polysaccharide deacetylase family protein;protein_id=WP_002922459.1;transl_table=11 NZ_CP100601.1 RefSeq gene 157563 158834 . - . ID=gene-NLI98_RS00780;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=NLI98_RS00780;old_locus_tag=NLI98_00780 NZ_CP100601.1 Protein Homology CDS 157563 158834 . - 0 ID=cds-WP_002922458.1;Parent=gene-NLI98_RS00780;Dbxref=Genbank:WP_002922458.1;Name=WP_002922458.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229417.1;locus_tag=NLI98_RS00780;product=murein hydrolase activator EnvC;protein_id=WP_002922458.1;transl_table=11 NZ_CP100601.1 RefSeq gene 158844 160388 . - . ID=gene-NLI98_RS00785;Name=gpmM;gbkey=Gene;gene=gpmM;gene_biotype=protein_coding;gene_synonym=pgmI;locus_tag=NLI98_RS00785;old_locus_tag=NLI98_00785 NZ_CP100601.1 Protein Homology CDS 158844 160388 . - 0 ID=cds-WP_004152046.1;Parent=gene-NLI98_RS00785;Dbxref=Genbank:WP_004152046.1;Name=WP_004152046.1;Ontology_term=GO:0006007,GO:0004619;gbkey=CDS;gene=gpmM;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glucose catabolic process|0006007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229416.1;locus_tag=NLI98_RS00785;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_004152046.1;transl_table=11 NZ_CP100601.1 RefSeq gene 160634 161065 . + . ID=gene-NLI98_RS00790;Name=NLI98_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00790;old_locus_tag=NLI98_00790 NZ_CP100601.1 Protein Homology CDS 160634 161065 . + 0 ID=cds-WP_002922436.1;Parent=gene-NLI98_RS00790;Dbxref=Genbank:WP_002922436.1;Name=WP_002922436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229415.1;locus_tag=NLI98_RS00790;product=rhodanese-like domain-containing protein;protein_id=WP_002922436.1;transl_table=11 NZ_CP100601.1 RefSeq gene 161170 161421 . + . ID=gene-NLI98_RS00795;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=NLI98_RS00795;old_locus_tag=NLI98_00795 NZ_CP100601.1 Protein Homology CDS 161170 161421 . + 0 ID=cds-WP_002922429.1;Parent=gene-NLI98_RS00795;Dbxref=Genbank:WP_002922429.1;Name=WP_002922429.1;gbkey=CDS;gene=grxC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229414.1;locus_tag=NLI98_RS00795;product=glutaredoxin 3;protein_id=WP_002922429.1;transl_table=11 NZ_CP100601.1 RefSeq gene 161482 161949 . + . ID=gene-NLI98_RS00800;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=NLI98_RS00800;old_locus_tag=NLI98_00800 NZ_CP100601.1 Protein Homology CDS 161482 161949 . + 0 ID=cds-WP_002922428.1;Parent=gene-NLI98_RS00800;Dbxref=Genbank:WP_002922428.1;Name=WP_002922428.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015369180.1;locus_tag=NLI98_RS00800;product=protein-export chaperone SecB;protein_id=WP_002922428.1;transl_table=11 NZ_CP100601.1 RefSeq gene 161949 162968 . + . ID=gene-NLI98_RS00805;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=NLI98_RS00805;old_locus_tag=NLI98_00805 NZ_CP100601.1 Protein Homology CDS 161949 162968 . + 0 ID=cds-WP_002922427.1;Parent=gene-NLI98_RS00805;Dbxref=Genbank:WP_002922427.1;Name=WP_002922427.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229412.1;locus_tag=NLI98_RS00805;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_002922427.1;transl_table=11 NZ_CP100601.1 RefSeq gene 163042 163863 . + . ID=gene-NLI98_RS00810;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=NLI98_RS00810;old_locus_tag=NLI98_00810 NZ_CP100601.1 Protein Homology CDS 163042 163863 . + 0 ID=cds-WP_002922426.1;Parent=gene-NLI98_RS00810;Dbxref=Genbank:WP_002922426.1;Name=WP_002922426.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112113.1;locus_tag=NLI98_RS00810;product=serine O-acetyltransferase;protein_id=WP_002922426.1;transl_table=11 NZ_CP100601.1 RefSeq gene 163945 164418 . - . ID=gene-NLI98_RS00815;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=NLI98_RS00815;old_locus_tag=NLI98_00815 NZ_CP100601.1 Protein Homology CDS 163945 164418 . - 0 ID=cds-WP_004181521.1;Parent=gene-NLI98_RS00815;Dbxref=Genbank:WP_004181521.1;Name=WP_004181521.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000932331.1;locus_tag=NLI98_RS00815;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_004181521.1;transl_table=11 NZ_CP100601.1 RefSeq gene 164511 165695 . - . ID=gene-NLI98_RS00820;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=NLI98_RS00820;old_locus_tag=NLI98_00820 NZ_CP100601.1 Protein Homology CDS 164511 165695 . - 0 ID=cds-WP_088498470.1;Parent=gene-NLI98_RS00820;Dbxref=Genbank:WP_088498470.1;Name=WP_088498470.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229409.1;locus_tag=NLI98_RS00820;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_088498470.1;transl_table=11 NZ_CP100601.1 RefSeq gene 165695 166468 . - . ID=gene-NLI98_RS00825;Name=lldR;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=NLI98_RS00825;old_locus_tag=NLI98_00825 NZ_CP100601.1 Protein Homology CDS 165695 166468 . - 0 ID=cds-WP_002922415.1;Parent=gene-NLI98_RS00825;Dbxref=Genbank:WP_002922415.1;Name=WP_002922415.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=lldR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229408.1;locus_tag=NLI98_RS00825;product=transcriptional regulator LldR;protein_id=WP_002922415.1;transl_table=11 NZ_CP100601.1 RefSeq gene 166465 168120 . - . ID=gene-NLI98_RS00830;Name=lldP;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=NLI98_RS00830;old_locus_tag=NLI98_00830 NZ_CP100601.1 Protein Homology CDS 166465 168120 . - 0 ID=cds-WP_002922413.1;Parent=gene-NLI98_RS00830;Dbxref=Genbank:WP_002922413.1;Name=WP_002922413.1;Ontology_term=GO:0015727,GO:0015129,GO:0005886;gbkey=CDS;gene=lldP;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229407.1;locus_tag=NLI98_RS00830;product=L-lactate permease;protein_id=WP_002922413.1;transl_table=11 NZ_CP100601.1 RefSeq gene 168406 168768 . - . ID=gene-NLI98_RS00835;Name=NLI98_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00835;old_locus_tag=NLI98_00835 NZ_CP100601.1 Protein Homology CDS 168406 168768 . - 0 ID=cds-WP_002922410.1;Parent=gene-NLI98_RS00835;Dbxref=Genbank:WP_002922410.1;Name=WP_002922410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229406.1;locus_tag=NLI98_RS00835;product=YibL family ribosome-associated protein;protein_id=WP_002922410.1;transl_table=11 NZ_CP100601.1 RefSeq gene 169041 169265 . + . ID=gene-NLI98_RS00840;Name=NLI98_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00840;old_locus_tag=NLI98_00840 NZ_CP100601.1 Protein Homology CDS 169041 169265 . + 0 ID=cds-WP_002922402.1;Parent=gene-NLI98_RS00840;Dbxref=Genbank:WP_002922402.1;Name=WP_002922402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229405.1;locus_tag=NLI98_RS00840;product=hypothetical protein;protein_id=WP_002922402.1;transl_table=11 NZ_CP100601.1 RefSeq gene 169254 169850 . - . ID=gene-NLI98_RS00845;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=NLI98_RS00845;old_locus_tag=NLI98_00845 NZ_CP100601.1 Protein Homology CDS 169254 169850 . - 0 ID=cds-WP_002922401.1;Parent=gene-NLI98_RS00845;Dbxref=Genbank:WP_002922401.1;Name=WP_002922401.1;gbkey=CDS;gene=mtlR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229404.1;locus_tag=NLI98_RS00845;product=mannitol operon repressor MtlR;protein_id=WP_002922401.1;transl_table=11 NZ_CP100601.1 RefSeq gene 169850 170998 . - . ID=gene-NLI98_RS00850;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=NLI98_RS00850;old_locus_tag=NLI98_00850 NZ_CP100601.1 Protein Homology CDS 169850 170998 . - 0 ID=cds-WP_004145239.1;Parent=gene-NLI98_RS00850;Dbxref=Genbank:WP_004145239.1;Name=WP_004145239.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;gene=mtlD;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229403.1;locus_tag=NLI98_RS00850;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_004145239.1;transl_table=11 NZ_CP100601.1 RefSeq gene 171099 173006 . - . ID=gene-NLI98_RS00855;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=NLI98_RS00855;old_locus_tag=NLI98_00855 NZ_CP100601.1 Protein Homology CDS 171099 173006 . - 0 ID=cds-WP_002922397.1;Parent=gene-NLI98_RS00855;Dbxref=Genbank:WP_002922397.1;Name=WP_002922397.1;gbkey=CDS;gene=mtlA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229402.1;locus_tag=NLI98_RS00855;product=PTS mannitol transporter subunit IICBA;protein_id=WP_002922397.1;transl_table=11 NZ_CP100601.1 RefSeq gene 173585 173728 . + . ID=gene-NLI98_RS00860;Name=NLI98_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00860;old_locus_tag=NLI98_00860 NZ_CP100601.1 Protein Homology CDS 173585 173728 . + 0 ID=cds-WP_077255672.1;Parent=gene-NLI98_RS00860;Dbxref=Genbank:WP_077255672.1;Name=WP_077255672.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024923.2;locus_tag=NLI98_RS00860;product=hypothetical protein;protein_id=WP_077255672.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 173736 173867 . + . ID=gene-NLI98_RS00865;Name=NLI98_RS00865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS00865;old_locus_tag=NLI98_00865;partial=true;pseudo=true;start_range=.,173736 NZ_CP100601.1 Protein Homology CDS 173736 173867 . + 0 ID=cds-NLI98_RS00865;Parent=gene-NLI98_RS00865;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312489.1;locus_tag=NLI98_RS00865;partial=true;product=hypothetical protein;pseudo=true;start_range=.,173736;transl_table=11 NZ_CP100601.1 RefSeq gene 173974 174582 . + . ID=gene-NLI98_RS00870;Name=NLI98_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00870;old_locus_tag=NLI98_00870 NZ_CP100601.1 Protein Homology CDS 173974 174582 . + 0 ID=cds-WP_004173921.1;Parent=gene-NLI98_RS00870;Dbxref=Genbank:WP_004173921.1;Name=WP_004173921.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229399.1;locus_tag=NLI98_RS00870;product=glutathione S-transferase;protein_id=WP_004173921.1;transl_table=11 NZ_CP100601.1 RefSeq gene 174688 176076 . + . ID=gene-NLI98_RS00875;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=NLI98_RS00875;old_locus_tag=NLI98_00875 NZ_CP100601.1 Protein Homology CDS 174688 176076 . + 0 ID=cds-WP_048969394.1;Parent=gene-NLI98_RS00875;Dbxref=Genbank:WP_048969394.1;Name=WP_048969394.1;Ontology_term=GO:0016260,GO:0004125;gbkey=CDS;gene=selA;go_function=L-seryl-tRNASec selenium transferase activity|0004125||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229398.1;locus_tag=NLI98_RS00875;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_048969394.1;transl_table=11 NZ_CP100601.1 RefSeq gene 176073 177914 . + . ID=gene-NLI98_RS00880;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=NLI98_RS00880;old_locus_tag=NLI98_00880 NZ_CP100601.1 Protein Homology CDS 176073 177914 . + 0 ID=cds-WP_032413119.1;Parent=gene-NLI98_RS00880;Dbxref=Genbank:WP_032413119.1;Name=WP_032413119.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525;gbkey=CDS;gene=selB;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229397.1;locus_tag=NLI98_RS00880;product=selenocysteine-specific translation elongation factor;protein_id=WP_032413119.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 177957 178049 . + . ID=gene-NLI98_RS00885;Name=NLI98_RS00885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS00885;old_locus_tag=NLI98_00885;partial=true;pseudo=true;start_range=.,177957 NZ_CP100601.1 Protein Homology CDS 177957 178049 . + 0 ID=cds-NLI98_RS00885;Parent=gene-NLI98_RS00885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540327.1;locus_tag=NLI98_RS00885;partial=true;product=IclR family transcriptional regulator;pseudo=true;start_range=.,177957;transl_table=11 NZ_CP100601.1 RefSeq gene 178159 178644 . + . ID=gene-NLI98_RS00890;Name=NLI98_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00890;old_locus_tag=NLI98_00890 NZ_CP100601.1 Protein Homology CDS 178159 178644 . + 0 ID=cds-WP_088498471.1;Parent=gene-NLI98_RS00890;Dbxref=Genbank:WP_088498471.1;Name=WP_088498471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229396.1;locus_tag=NLI98_RS00890;product=4Fe-4S binding protein;protein_id=WP_088498471.1;transl_table=11 NZ_CP100601.1 RefSeq gene 178687 179943 . - . ID=gene-NLI98_RS00895;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=NLI98_RS00895;old_locus_tag=NLI98_00895 NZ_CP100601.1 Protein Homology CDS 178687 179943 . - 0 ID=cds-WP_002922359.1;Parent=gene-NLI98_RS00895;Dbxref=Genbank:WP_002922359.1;Name=WP_002922359.1;gbkey=CDS;gene=avtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229395.1;locus_tag=NLI98_RS00895;product=valine--pyruvate transaminase;protein_id=WP_002922359.1;transl_table=11 NZ_CP100601.1 RefSeq gene 180114 182147 . - . ID=gene-NLI98_RS00900;Name=NLI98_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00900;old_locus_tag=NLI98_00900 NZ_CP100601.1 Protein Homology CDS 180114 182147 . - 0 ID=cds-WP_088498472.1;Parent=gene-NLI98_RS00900;Dbxref=Genbank:WP_088498472.1;Name=WP_088498472.1;Ontology_term=GO:0004556;gbkey=CDS;go_function=alpha-amylase activity|0004556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229394.1;locus_tag=NLI98_RS00900;product=alpha-amylase;protein_id=WP_088498472.1;transl_table=11 NZ_CP100601.1 RefSeq gene 182462 183280 . + . ID=gene-NLI98_RS00905;Name=NLI98_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00905;old_locus_tag=NLI98_00905 NZ_CP100601.1 Protein Homology CDS 182462 183280 . + 0 ID=cds-WP_004188166.1;Parent=gene-NLI98_RS00905;Dbxref=Genbank:WP_004188166.1;Name=WP_004188166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026230.1;locus_tag=NLI98_RS00905;product=protein bax;protein_id=WP_004188166.1;transl_table=11 NZ_CP100601.1 RefSeq gene 183318 184496 . - . ID=gene-NLI98_RS00910;Name=NLI98_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00910;old_locus_tag=NLI98_00910 NZ_CP100601.1 Protein Homology CDS 183318 184496 . - 0 ID=cds-WP_004145231.1;Parent=gene-NLI98_RS00910;Dbxref=Genbank:WP_004145231.1;Name=WP_004145231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229392.1;locus_tag=NLI98_RS00910;product=XylR family transcriptional regulator;protein_id=WP_004145231.1;transl_table=11 NZ_CP100601.1 RefSeq gene 184729 185910 . - . ID=gene-NLI98_RS00915;Name=gguB;gbkey=Gene;gene=gguB;gene_biotype=protein_coding;locus_tag=NLI98_RS00915;old_locus_tag=NLI98_00915 NZ_CP100601.1 Protein Homology CDS 184729 185910 . - 0 ID=cds-WP_002922349.1;Parent=gene-NLI98_RS00915;Dbxref=Genbank:WP_002922349.1;Name=WP_002922349.1;Ontology_term=GO:0043190;gbkey=CDS;gene=gguB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229391.1;locus_tag=NLI98_RS00915;product=sugar ABC transporter permease;protein_id=WP_002922349.1;transl_table=11 NZ_CP100601.1 RefSeq gene 185888 187429 . - . ID=gene-NLI98_RS00920;Name=NLI98_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00920;old_locus_tag=NLI98_00920 NZ_CP100601.1 Protein Homology CDS 185888 187429 . - 0 ID=cds-WP_002922346.1;Parent=gene-NLI98_RS00920;Dbxref=Genbank:WP_002922346.1;Name=WP_002922346.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229390.1;locus_tag=NLI98_RS00920;product=xylose ABC transporter ATP-binding protein;protein_id=WP_002922346.1;transl_table=11 NZ_CP100601.1 RefSeq gene 187494 188489 . - . ID=gene-NLI98_RS00925;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=NLI98_RS00925;old_locus_tag=NLI98_00925 NZ_CP100601.1 Protein Homology CDS 187494 188489 . - 0 ID=cds-WP_004152040.1;Parent=gene-NLI98_RS00925;Dbxref=Genbank:WP_004152040.1;Name=WP_004152040.1;Ontology_term=GO:0015753;gbkey=CDS;gene=xylF;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418023.1;locus_tag=NLI98_RS00925;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_004152040.1;transl_table=11 NZ_CP100601.1 RefSeq gene 188984 190306 . + . ID=gene-NLI98_RS00930;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=NLI98_RS00930;old_locus_tag=NLI98_00930 NZ_CP100601.1 Protein Homology CDS 188984 190306 . + 0 ID=cds-WP_002922139.1;Parent=gene-NLI98_RS00930;Dbxref=Genbank:WP_002922139.1;Name=WP_002922139.1;Ontology_term=GO:0006098,GO:0042732,GO:0000287,GO:0009045;gbkey=CDS;gene=xylA;go_function=magnesium ion binding|0000287||IEA,xylose isomerase activity|0009045||IEA;go_process=pentose-phosphate shunt|0006098||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229388.1;locus_tag=NLI98_RS00930;product=xylose isomerase;protein_id=WP_002922139.1;transl_table=11 NZ_CP100601.1 RefSeq gene 190399 191853 . + . ID=gene-NLI98_RS00935;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=NLI98_RS00935;old_locus_tag=NLI98_00935 NZ_CP100601.1 Protein Homology CDS 190399 191853 . + 0 ID=cds-WP_004150156.1;Parent=gene-NLI98_RS00935;Dbxref=Genbank:WP_004150156.1;Name=WP_004150156.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229387.1;locus_tag=NLI98_RS00935;product=xylulokinase;protein_id=WP_004150156.1;transl_table=11 NZ_CP100601.1 RefSeq gene 192022 192393 . + . ID=gene-NLI98_RS00940;Name=yiaB;gbkey=Gene;gene=yiaB;gene_biotype=protein_coding;locus_tag=NLI98_RS00940;old_locus_tag=NLI98_00940 NZ_CP100601.1 Protein Homology CDS 192022 192393 . + 0 ID=cds-WP_002922133.1;Parent=gene-NLI98_RS00940;Dbxref=Genbank:WP_002922133.1;Name=WP_002922133.1;gbkey=CDS;gene=yiaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229386.1;locus_tag=NLI98_RS00940;product=inner membrane protein YiaB;protein_id=WP_002922133.1;transl_table=11 NZ_CP100601.1 RefSeq gene 192425 192871 . + . ID=gene-NLI98_RS00945;Name=yiaA;gbkey=Gene;gene=yiaA;gene_biotype=protein_coding;locus_tag=NLI98_RS00945;old_locus_tag=NLI98_00945 NZ_CP100601.1 Protein Homology CDS 192425 192871 . + 0 ID=cds-WP_004188180.1;Parent=gene-NLI98_RS00945;Dbxref=Genbank:WP_004188180.1;Name=WP_004188180.1;gbkey=CDS;gene=yiaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229385.1;locus_tag=NLI98_RS00945;product=inner membrane protein YiaA;protein_id=WP_004188180.1;transl_table=11 NZ_CP100601.1 RefSeq gene 192898 193893 . - . ID=gene-NLI98_RS00950;Name=NLI98_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00950;old_locus_tag=NLI98_00950 NZ_CP100601.1 Protein Homology CDS 192898 193893 . - 0 ID=cds-WP_048969391.1;Parent=gene-NLI98_RS00950;Dbxref=Genbank:WP_048969391.1;Name=WP_048969391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229384.1;locus_tag=NLI98_RS00950;product=acyltransferase;protein_id=WP_048969391.1;transl_table=11 NZ_CP100601.1 RefSeq gene 194073 194372 . + . ID=gene-NLI98_RS00955;Name=NLI98_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00955;old_locus_tag=NLI98_00955 NZ_CP100601.1 Protein Homology CDS 194073 194372 . + 0 ID=cds-WP_088498473.1;Parent=gene-NLI98_RS00955;Dbxref=Genbank:WP_088498473.1;Name=WP_088498473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229383.1;locus_tag=NLI98_RS00955;product=YsaB family lipoprotein;protein_id=WP_088498473.1;transl_table=11 NZ_CP100601.1 RefSeq gene 194500 195411 . + . ID=gene-NLI98_RS00960;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=NLI98_RS00960;old_locus_tag=NLI98_00960 NZ_CP100601.1 Protein Homology CDS 194500 195411 . + 0 ID=cds-WP_002922128.1;Parent=gene-NLI98_RS00960;Dbxref=Genbank:WP_002922128.1;Name=WP_002922128.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229382.1;locus_tag=NLI98_RS00960;product=glycine--tRNA ligase subunit alpha;protein_id=WP_002922128.1;transl_table=11 NZ_CP100601.1 RefSeq gene 195421 197490 . + . ID=gene-NLI98_RS00965;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=NLI98_RS00965;old_locus_tag=NLI98_00965 NZ_CP100601.1 Protein Homology CDS 195421 197490 . + 0 ID=cds-WP_002922127.1;Parent=gene-NLI98_RS00965;Dbxref=Genbank:WP_002922127.1;Name=WP_002922127.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001291772.1;locus_tag=NLI98_RS00965;product=glycine--tRNA ligase subunit beta;protein_id=WP_002922127.1;transl_table=11 NZ_CP100601.1 RefSeq gene 197816 197968 . + . ID=gene-NLI98_RS00970;Name=hokA;gbkey=Gene;gene=hokA;gene_biotype=protein_coding;locus_tag=NLI98_RS00970;old_locus_tag=NLI98_00970 NZ_CP100601.1 Protein Homology CDS 197816 197968 . + 0 ID=cds-WP_130951630.1;Parent=gene-NLI98_RS00970;Dbxref=Genbank:WP_130951630.1;Name=WP_130951630.1;gbkey=CDS;gene=hokA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229380.1;locus_tag=NLI98_RS00970;product=type I toxin-antitoxin system toxin HokA;protein_id=WP_130951630.1;transl_table=11 NZ_CP100601.1 RefSeq gene 198270 199889 . + . ID=gene-NLI98_RS00975;Name=NLI98_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00975;old_locus_tag=NLI98_00975 NZ_CP100601.1 Protein Homology CDS 198270 199889 . + 0 ID=cds-WP_102024145.1;Parent=gene-NLI98_RS00975;Dbxref=Genbank:WP_102024145.1;Name=WP_102024145.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229379.1;locus_tag=NLI98_RS00975;product=ATP-binding cassette domain-containing protein;protein_id=WP_102024145.1;transl_table=11 NZ_CP100601.1 RefSeq gene 199988 200200 . - . ID=gene-NLI98_RS00980;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;locus_tag=NLI98_RS00980;old_locus_tag=NLI98_00980 NZ_CP100601.1 Protein Homology CDS 199988 200200 . - 0 ID=cds-WP_000014594.1;Parent=gene-NLI98_RS00980;Dbxref=Genbank:WP_000014594.1;Name=WP_000014594.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312468.1;locus_tag=NLI98_RS00980;product=RNA chaperone/antiterminator CspA;protein_id=WP_000014594.1;transl_table=11 NZ_CP100601.1 RefSeq gene 200453 200743 . - . ID=gene-NLI98_RS00985;Name=NLI98_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00985;old_locus_tag=NLI98_00985 NZ_CP100601.1 Protein Homology CDS 200453 200743 . - 0 ID=cds-WP_002921931.1;Parent=gene-NLI98_RS00985;Dbxref=Genbank:WP_002921931.1;Name=WP_002921931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229377.1;locus_tag=NLI98_RS00985;product=HTH-type transcriptional regulator;protein_id=WP_002921931.1;transl_table=11 NZ_CP100601.1 RefSeq gene 200989 202344 . - . ID=gene-NLI98_RS00990;Name=NLI98_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00990;old_locus_tag=NLI98_00990 NZ_CP100601.1 Protein Homology CDS 200989 202344 . - 0 ID=cds-WP_004901270.1;Parent=gene-NLI98_RS00990;Dbxref=Genbank:WP_004901270.1;Name=WP_004901270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229376.1;locus_tag=NLI98_RS00990;product=aromatic acid/H+ symport family MFS transporter;protein_id=WP_004901270.1;transl_table=11 NZ_CP100601.1 RefSeq gene 202785 203495 . + . ID=gene-NLI98_RS00995;Name=NLI98_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS00995;old_locus_tag=NLI98_00995 NZ_CP100601.1 Protein Homology CDS 202785 203495 . + 0 ID=cds-WP_002921929.1;Parent=gene-NLI98_RS00995;Dbxref=Genbank:WP_002921929.1;Name=WP_002921929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229375.1;locus_tag=NLI98_RS00995;product=DUF3053 domain-containing protein;protein_id=WP_002921929.1;transl_table=11 NZ_CP100601.1 RefSeq gene 203604 204575 . - . ID=gene-NLI98_RS01000;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=NLI98_RS01000;old_locus_tag=NLI98_01000 NZ_CP100601.1 Protein Homology CDS 203604 204575 . - 0 ID=cds-WP_004145219.1;Parent=gene-NLI98_RS01000;Dbxref=Genbank:WP_004145219.1;Name=WP_004145219.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229374.1;locus_tag=NLI98_RS01000;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_004145219.1;transl_table=11 NZ_CP100601.1 RefSeq gene 204600 205880 . - . ID=gene-NLI98_RS01005;Name=NLI98_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01005;old_locus_tag=NLI98_01005 NZ_CP100601.1 Protein Homology CDS 204600 205880 . - 0 ID=cds-WP_002921927.1;Parent=gene-NLI98_RS01005;Dbxref=Genbank:WP_002921927.1;Name=WP_002921927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229373.1;locus_tag=NLI98_RS01005;product=MFS transporter;protein_id=WP_002921927.1;transl_table=11 NZ_CP100601.1 RefSeq gene 205985 206920 . - . ID=gene-NLI98_RS01010;Name=NLI98_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01010;old_locus_tag=NLI98_01010 NZ_CP100601.1 Protein Homology CDS 205985 206920 . - 0 ID=cds-WP_002921921.1;Parent=gene-NLI98_RS01010;Dbxref=Genbank:WP_002921921.1;Name=WP_002921921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229372.1;locus_tag=NLI98_RS01010;product=sugar kinase;protein_id=WP_002921921.1;transl_table=11 NZ_CP100601.1 RefSeq gene 206924 207673 . - . ID=gene-NLI98_RS01015;Name=NLI98_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01015;old_locus_tag=NLI98_01015 NZ_CP100601.1 Protein Homology CDS 206924 207673 . - 0 ID=cds-WP_002921919.1;Parent=gene-NLI98_RS01015;Dbxref=Genbank:WP_002921919.1;Name=WP_002921919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229371.1;locus_tag=NLI98_RS01015;product=hypothetical protein;protein_id=WP_002921919.1;transl_table=11 NZ_CP100601.1 RefSeq gene 207785 208801 . - . ID=gene-NLI98_RS01020;Name=NLI98_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01020;old_locus_tag=NLI98_01020 NZ_CP100601.1 Protein Homology CDS 207785 208801 . - 0 ID=cds-WP_002921918.1;Parent=gene-NLI98_RS01020;Dbxref=Genbank:WP_002921918.1;Name=WP_002921918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229370.1;locus_tag=NLI98_RS01020;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_002921918.1;transl_table=11 NZ_CP100601.1 RefSeq gene 208905 209567 . - . ID=gene-NLI98_RS01025;Name=NLI98_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01025;old_locus_tag=NLI98_01025 NZ_CP100601.1 Protein Homology CDS 208905 209567 . - 0 ID=cds-WP_002921917.1;Parent=gene-NLI98_RS01025;Dbxref=Genbank:WP_002921917.1;Name=WP_002921917.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229368.1;locus_tag=NLI98_RS01025;product=OmpA family lipoprotein;protein_id=WP_002921917.1;transl_table=11 NZ_CP100601.1 RefSeq gene 209735 212065 . + . ID=gene-NLI98_RS01030;Name=NLI98_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01030;old_locus_tag=NLI98_01030 NZ_CP100601.1 Protein Homology CDS 209735 212065 . + 0 ID=cds-WP_088498476.1;Parent=gene-NLI98_RS01030;Dbxref=Genbank:WP_088498476.1;Name=WP_088498476.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229367.1;locus_tag=NLI98_RS01030;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_088498476.1;transl_table=11 NZ_CP100601.1 RefSeq gene 212034 212474 . - . ID=gene-NLI98_RS01035;Name=NLI98_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01035;old_locus_tag=NLI98_01035 NZ_CP100601.1 Protein Homology CDS 212034 212474 . - 0 ID=cds-WP_015959126.1;Parent=gene-NLI98_RS01035;Dbxref=Genbank:WP_015959126.1;Name=WP_015959126.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229366.1;locus_tag=NLI98_RS01035;product=N-acetyltransferase;protein_id=WP_015959126.1;transl_table=11 NZ_CP100601.1 RefSeq gene 212452 213033 . - . ID=gene-NLI98_RS01040;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=NLI98_RS01040;old_locus_tag=NLI98_01040 NZ_CP100601.1 Protein Homology CDS 212452 213033 . - 0 ID=cds-WP_002921914.1;Parent=gene-NLI98_RS01040;Dbxref=Genbank:WP_002921914.1;Name=WP_002921914.1;gbkey=CDS;gene=tag;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229365.1;locus_tag=NLI98_RS01040;product=DNA-3-methyladenine glycosylase I;protein_id=WP_002921914.1;transl_table=11 NZ_CP100601.1 RefSeq gene 213239 213820 . + . ID=gene-NLI98_RS01045;Name=NLI98_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01045;old_locus_tag=NLI98_01045 NZ_CP100601.1 Protein Homology CDS 213239 213820 . + 0 ID=cds-WP_020803959.1;Parent=gene-NLI98_RS01045;Dbxref=Genbank:WP_020803959.1;Name=WP_020803959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229364.1;locus_tag=NLI98_RS01045;product=hypothetical protein;protein_id=WP_020803959.1;transl_table=11 NZ_CP100601.1 RefSeq gene 214062 215267 . + . ID=gene-NLI98_RS01050;Name=NLI98_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01050;old_locus_tag=NLI98_01050 NZ_CP100601.1 Protein Homology CDS 214062 215267 . + 0 ID=cds-WP_002921907.1;Parent=gene-NLI98_RS01050;Dbxref=Genbank:WP_002921907.1;Name=WP_002921907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229363.1;locus_tag=NLI98_RS01050;product=MFS transporter;protein_id=WP_002921907.1;transl_table=11 NZ_CP100601.1 RefSeq gene 215510 217183 . + . ID=gene-NLI98_RS01055;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=NLI98_RS01055;old_locus_tag=NLI98_01055 NZ_CP100601.1 Protein Homology CDS 215510 217183 . + 0 ID=cds-WP_004152427.1;Parent=gene-NLI98_RS01055;Dbxref=Genbank:WP_004152427.1;Name=WP_004152427.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229362.1;locus_tag=NLI98_RS01055;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_004152427.1;transl_table=11 NZ_CP100601.1 RefSeq gene 217375 218769 . + . ID=gene-NLI98_RS01060;Name=NLI98_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01060;old_locus_tag=NLI98_01060 NZ_CP100601.1 Protein Homology CDS 217375 218769 . + 0 ID=cds-WP_009308766.1;Parent=gene-NLI98_RS01060;Dbxref=Genbank:WP_009308766.1;Name=WP_009308766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229361.1;locus_tag=NLI98_RS01060;product=ankyrin repeat domain-containing protein;protein_id=WP_009308766.1;transl_table=11 NZ_CP100601.1 RefSeq gene 218889 218965 . + . ID=gene-NLI98_RS01065;Name=NLI98_RS01065;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS01065;old_locus_tag=NLI98_01065 NZ_CP100601.1 tRNAscan-SE tRNA 218889 218965 . + . ID=rna-NLI98_RS01065;Parent=gene-NLI98_RS01065;anticodon=(pos:218923..218925);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS01065;product=tRNA-Pro NZ_CP100601.1 tRNAscan-SE exon 218889 218965 . + . ID=exon-NLI98_RS01065-1;Parent=rna-NLI98_RS01065;anticodon=(pos:218923..218925);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS01065;product=tRNA-Pro NZ_CP100601.1 RefSeq gene 219000 219132 . + . ID=gene-NLI98_RS01070;Name=NLI98_RS01070;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NLI98_RS01070;old_locus_tag=NLI98_01070 NZ_CP100601.1 cmsearch ncRNA 219000 219132 . + . ID=rna-NLI98_RS01070;Parent=gene-NLI98_RS01070;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS01070;product=RtT sRNA NZ_CP100601.1 cmsearch exon 219000 219132 . + . ID=exon-NLI98_RS01070-1;Parent=rna-NLI98_RS01070;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS01070;product=RtT sRNA NZ_CP100601.1 RefSeq gene 219167 219299 . + . ID=gene-NLI98_RS01075;Name=NLI98_RS01075;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NLI98_RS01075;old_locus_tag=NLI98_01075 NZ_CP100601.1 cmsearch ncRNA 219167 219299 . + . ID=rna-NLI98_RS01075;Parent=gene-NLI98_RS01075;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS01075;product=RtT sRNA NZ_CP100601.1 cmsearch exon 219167 219299 . + . ID=exon-NLI98_RS01075-1;Parent=rna-NLI98_RS01075;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS01075;product=RtT sRNA NZ_CP100601.1 RefSeq gene 220016 221623 . + . ID=gene-NLI98_RS01080;Name=NLI98_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01080;old_locus_tag=NLI98_01080 NZ_CP100601.1 Protein Homology CDS 220016 221623 . + 0 ID=cds-WP_002921789.1;Parent=gene-NLI98_RS01080;Dbxref=Genbank:WP_002921789.1;Name=WP_002921789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462532.1;locus_tag=NLI98_RS01080;product=ABC transporter substrate-binding protein;protein_id=WP_002921789.1;transl_table=11 NZ_CP100601.1 RefSeq gene 221758 222777 . + . ID=gene-NLI98_RS01085;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=NLI98_RS01085;old_locus_tag=NLI98_01085 NZ_CP100601.1 Protein Homology CDS 221758 222777 . + 0 ID=cds-WP_002921786.1;Parent=gene-NLI98_RS01085;Dbxref=Genbank:WP_002921786.1;Name=WP_002921786.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=NLI98_RS01085;product=dipeptide ABC transporter permease DppB;protein_id=WP_002921786.1;transl_table=11 NZ_CP100601.1 RefSeq gene 222787 223689 . + . ID=gene-NLI98_RS01090;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=NLI98_RS01090;old_locus_tag=NLI98_01090 NZ_CP100601.1 Protein Homology CDS 222787 223689 . + 0 ID=cds-WP_004145207.1;Parent=gene-NLI98_RS01090;Dbxref=Genbank:WP_004145207.1;Name=WP_004145207.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010426221.1;locus_tag=NLI98_RS01090;product=dipeptide ABC transporter permease DppC;protein_id=WP_004145207.1;transl_table=11 NZ_CP100601.1 RefSeq gene 223700 224683 . + . ID=gene-NLI98_RS01095;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=NLI98_RS01095;old_locus_tag=NLI98_01095 NZ_CP100601.1 Protein Homology CDS 223700 224683 . + 0 ID=cds-WP_062920405.1;Parent=gene-NLI98_RS01095;Dbxref=Genbank:WP_062920405.1;Name=WP_062920405.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229355.1;locus_tag=NLI98_RS01095;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_062920405.1;transl_table=11 NZ_CP100601.1 RefSeq gene 224680 225693 . + . ID=gene-NLI98_RS01100;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=NLI98_RS01100;old_locus_tag=NLI98_01100 NZ_CP100601.1 Protein Homology CDS 224680 225693 . + 0 ID=cds-WP_002921784.1;Parent=gene-NLI98_RS01100;Dbxref=Genbank:WP_002921784.1;Name=WP_002921784.1;gbkey=CDS;gene=dppF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229354.1;locus_tag=NLI98_RS01100;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_002921784.1;transl_table=11 NZ_CP100601.1 RefSeq gene 225712 225891 . + . ID=gene-NLI98_RS01105;Name=NLI98_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01105;old_locus_tag=NLI98_01105 NZ_CP100601.1 Protein Homology CDS 225712 225891 . + 0 ID=cds-WP_004145206.1;Parent=gene-NLI98_RS01105;Dbxref=Genbank:WP_004145206.1;Name=WP_004145206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229353.1;locus_tag=NLI98_RS01105;product=hypothetical protein;protein_id=WP_004145206.1;transl_table=11 NZ_CP100601.1 RefSeq gene 226208 226747 . + . ID=gene-NLI98_RS01110;Name=bcsO;gbkey=Gene;gene=bcsO;gene_biotype=protein_coding;locus_tag=NLI98_RS01110;old_locus_tag=NLI98_01110 NZ_CP100601.1 Protein Homology CDS 226208 226747 . + 0 ID=cds-WP_040199779.1;Parent=gene-NLI98_RS01110;Dbxref=Genbank:WP_040199779.1;Name=WP_040199779.1;gbkey=CDS;gene=bcsO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229352.1;locus_tag=NLI98_RS01110;product=cellulose biosynthesis protein BcsO;protein_id=WP_040199779.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 226749 227541 . + . ID=gene-NLI98_RS01115;Name=NLI98_RS01115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS01115;old_locus_tag=NLI98_01115;pseudo=true NZ_CP100601.1 Protein Homology CDS 226749 227541 . + 0 ID=cds-NLI98_RS01115;Parent=gene-NLI98_RS01115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229351.1;locus_tag=NLI98_RS01115;product=AAA family ATPase;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 227561 229672 . + . ID=gene-NLI98_RS01120;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=NLI98_RS01120;old_locus_tag=NLI98_01120 NZ_CP100601.1 Protein Homology CDS 227561 229672 . + 0 ID=cds-WP_004186066.1;Parent=gene-NLI98_RS01120;Dbxref=Genbank:WP_004186066.1;Name=WP_004186066.1;Ontology_term=GO:0006011,GO:0030244,GO:0016759,GO:0035438;gbkey=CDS;gene=bcsA;go_function=cellulose synthase activity|0016759||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229350.1;locus_tag=NLI98_RS01120;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_004186066.1;transl_table=11 NZ_CP100601.1 RefSeq gene 229669 232104 . + . ID=gene-NLI98_RS01125;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=NLI98_RS01125;old_locus_tag=NLI98_01125 NZ_CP100601.1 Protein Homology CDS 229669 232104 . + 0 ID=cds-WP_004151435.1;Parent=gene-NLI98_RS01125;Dbxref=Genbank:WP_004151435.1;Name=WP_004151435.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229349.1;locus_tag=NLI98_RS01125;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_004151435.1;transl_table=11 NZ_CP100601.1 RefSeq gene 232101 236153 . + . ID=gene-NLI98_RS01130;Name=NLI98_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01130;old_locus_tag=NLI98_01130 NZ_CP100601.1 Protein Homology CDS 232101 236153 . + 0 ID=cds-WP_088498478.1;Parent=gene-NLI98_RS01130;Dbxref=Genbank:WP_088498478.1;Name=WP_088498478.1;Ontology_term=GO:0030244,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229348.1;locus_tag=NLI98_RS01130;product=cellulose biosynthesis protein BcsC;protein_id=WP_088498478.1;transl_table=11 NZ_CP100601.1 RefSeq gene 236153 236629 . + . ID=gene-NLI98_RS01135;Name=NLI98_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01135;old_locus_tag=NLI98_01135 NZ_CP100601.1 Protein Homology CDS 236153 236629 . + 0 ID=cds-WP_002921529.1;Parent=gene-NLI98_RS01135;Dbxref=Genbank:WP_002921529.1;Name=WP_002921529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229347.1;locus_tag=NLI98_RS01135;product=hypothetical protein;protein_id=WP_002921529.1;transl_table=11 NZ_CP100601.1 RefSeq gene 236641 237642 . + . ID=gene-NLI98_RS01140;Name=NLI98_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01140;old_locus_tag=NLI98_01140 NZ_CP100601.1 Protein Homology CDS 236641 237642 . + 0 ID=cds-WP_015959121.1;Parent=gene-NLI98_RS01140;Dbxref=Genbank:WP_015959121.1;Name=WP_015959121.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229346.1;locus_tag=NLI98_RS01140;product=glycosyl hydrolase family 8;protein_id=WP_015959121.1;transl_table=11 NZ_CP100601.1 RefSeq gene 237750 239429 . - . ID=gene-NLI98_RS01145;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=NLI98_RS01145;old_locus_tag=NLI98_01145 NZ_CP100601.1 Protein Homology CDS 237750 239429 . - 0 ID=cds-WP_004188236.1;Parent=gene-NLI98_RS01145;Dbxref=Genbank:WP_004188236.1;Name=WP_004188236.1;Ontology_term=GO:0030244,GO:0003674,GO:0005575;gbkey=CDS;gene=bcsG;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229345.1;locus_tag=NLI98_RS01145;product=cellulose biosynthesis protein BcsG;protein_id=WP_004188236.1;transl_table=11 NZ_CP100601.1 RefSeq gene 239426 239623 . - . ID=gene-NLI98_RS01150;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=NLI98_RS01150;old_locus_tag=NLI98_01150 NZ_CP100601.1 Protein Homology CDS 239426 239623 . - 0 ID=cds-WP_002921518.1;Parent=gene-NLI98_RS01150;Dbxref=Genbank:WP_002921518.1;Name=WP_002921518.1;Ontology_term=GO:0052324,GO:0003674,GO:0005575;gbkey=CDS;gene=bcsF;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=plant-type cell wall cellulose biosynthetic process|0052324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229344.1;locus_tag=NLI98_RS01150;product=cellulose biosynthesis protein BcsF;protein_id=WP_002921518.1;transl_table=11 NZ_CP100601.1 RefSeq gene 239623 241176 . - . ID=gene-NLI98_RS01155;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=NLI98_RS01155;old_locus_tag=NLI98_01155 NZ_CP100601.1 Protein Homology CDS 239623 241176 . - 0 ID=cds-WP_088498479.1;Parent=gene-NLI98_RS01155;Dbxref=Genbank:WP_088498479.1;Name=WP_088498479.1;gbkey=CDS;gene=bcsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229343.1;locus_tag=NLI98_RS01155;product=cellulose biosynthesis protein BcsE;protein_id=WP_088498479.1;transl_table=11 NZ_CP100601.1 RefSeq gene 241345 241533 . + . ID=gene-NLI98_RS01160;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=NLI98_RS01160;old_locus_tag=NLI98_01160 NZ_CP100601.1 Protein Homology CDS 241345 241533 . + 0 ID=cds-WP_002921513.1;Parent=gene-NLI98_RS01160;Dbxref=Genbank:WP_002921513.1;Name=WP_002921513.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229342.1;locus_tag=NLI98_RS01160;product=cellulose biosynthesis protein BcsR;protein_id=WP_002921513.1;transl_table=11 NZ_CP100601.1 RefSeq gene 241545 242276 . + . ID=gene-NLI98_RS01165;Name=bcsQ;gbkey=Gene;gene=bcsQ;gene_biotype=protein_coding;locus_tag=NLI98_RS01165;old_locus_tag=NLI98_01165 NZ_CP100601.1 Protein Homology CDS 241545 242276 . + 0 ID=cds-WP_002921510.1;Parent=gene-NLI98_RS01165;Dbxref=Genbank:WP_002921510.1;Name=WP_002921510.1;gbkey=CDS;gene=bcsQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229341.1;locus_tag=NLI98_RS01165;product=cellulose biosynthesis protein BcsQ;protein_id=WP_002921510.1;transl_table=11 NZ_CP100601.1 RefSeq gene 242273 244891 . + . ID=gene-NLI98_RS01170;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=NLI98_RS01170;old_locus_tag=NLI98_01170 NZ_CP100601.1 Protein Homology CDS 242273 244891 . + 0 ID=cds-WP_021312498.1;Parent=gene-NLI98_RS01170;Dbxref=Genbank:WP_021312498.1;Name=WP_021312498.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229340.1;locus_tag=NLI98_RS01170;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_021312498.1;transl_table=11 NZ_CP100601.1 RefSeq gene 244902 247247 . + . ID=gene-NLI98_RS01175;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=NLI98_RS01175;old_locus_tag=NLI98_01175 NZ_CP100601.1 Protein Homology CDS 244902 247247 . + 0 ID=cds-WP_004901208.1;Parent=gene-NLI98_RS01175;Dbxref=Genbank:WP_004901208.1;Name=WP_004901208.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229339.1;locus_tag=NLI98_RS01175;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_004901208.1;transl_table=11 NZ_CP100601.1 RefSeq gene 247251 248360 . + . ID=gene-NLI98_RS01180;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=NLI98_RS01180;old_locus_tag=NLI98_01180 NZ_CP100601.1 Protein Homology CDS 247251 248360 . + 0 ID=cds-WP_004151431.1;Parent=gene-NLI98_RS01180;Dbxref=Genbank:WP_004151431.1;Name=WP_004151431.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229338.1;locus_tag=NLI98_RS01180;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_004151431.1;transl_table=11 NZ_CP100601.1 RefSeq gene 248342 251821 . + . ID=gene-NLI98_RS01185;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=NLI98_RS01185;old_locus_tag=NLI98_01185 NZ_CP100601.1 Protein Homology CDS 248342 251821 . + 0 ID=cds-WP_046653198.1;Parent=gene-NLI98_RS01185;Dbxref=Genbank:WP_046653198.1;Name=WP_046653198.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229337.1;locus_tag=NLI98_RS01185;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_046653198.1;transl_table=11 NZ_CP100601.1 RefSeq gene 252064 254070 . + . ID=gene-NLI98_RS01190;Name=hmsP;gbkey=Gene;gene=hmsP;gene_biotype=protein_coding;locus_tag=NLI98_RS01190;old_locus_tag=NLI98_01190 NZ_CP100601.1 Protein Homology CDS 252064 254070 . + 0 ID=cds-WP_217900570.1;Parent=gene-NLI98_RS01190;Dbxref=Genbank:WP_217900570.1;Name=WP_217900570.1;Ontology_term=GO:0007165;gbkey=CDS;gene=hmsP;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229335.1;locus_tag=NLI98_RS01190;product=biofilm formation regulator HmsP;protein_id=WP_217900570.1;transl_table=11 NZ_CP100601.1 RefSeq gene 254227 255513 . + . ID=gene-NLI98_RS01195;Name=NLI98_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01195;old_locus_tag=NLI98_01195 NZ_CP100601.1 Protein Homology CDS 254227 255513 . + 0 ID=cds-WP_002921438.1;Parent=gene-NLI98_RS01195;Dbxref=Genbank:WP_002921438.1;Name=WP_002921438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229334.1;locus_tag=NLI98_RS01195;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_002921438.1;transl_table=11 NZ_CP100601.1 RefSeq gene 255733 257235 . + . ID=gene-NLI98_RS01200;Name=NLI98_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01200;old_locus_tag=NLI98_01200 NZ_CP100601.1 Protein Homology CDS 255733 257235 . + 0 ID=cds-WP_002921436.1;Parent=gene-NLI98_RS01200;Dbxref=Genbank:WP_002921436.1;Name=WP_002921436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229333.1;locus_tag=NLI98_RS01200;product=insulinase family protein;protein_id=WP_002921436.1;transl_table=11 NZ_CP100601.1 RefSeq gene 257290 258219 . - . ID=gene-NLI98_RS01205;Name=NLI98_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01205;old_locus_tag=NLI98_01205 NZ_CP100601.1 Protein Homology CDS 257290 258219 . - 0 ID=cds-WP_020325155.1;Parent=gene-NLI98_RS01205;Dbxref=Genbank:WP_020325155.1;Name=WP_020325155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229332.1;locus_tag=NLI98_RS01205;product=sugar kinase;protein_id=WP_020325155.1;transl_table=11 NZ_CP100601.1 RefSeq gene 258414 260465 . + . ID=gene-NLI98_RS01210;Name=NLI98_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01210;old_locus_tag=NLI98_01210 NZ_CP100601.1 Protein Homology CDS 258414 260465 . + 0 ID=cds-WP_004211224.1;Parent=gene-NLI98_RS01210;Dbxref=Genbank:WP_004211224.1;Name=WP_004211224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229330.1;locus_tag=NLI98_RS01210;product=AsmA family protein;protein_id=WP_004211224.1;transl_table=11 NZ_CP100601.1 RefSeq gene 260503 261825 . - . ID=gene-NLI98_RS01215;Name=NLI98_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01215;old_locus_tag=NLI98_01215 NZ_CP100601.1 Protein Homology CDS 260503 261825 . - 0 ID=cds-WP_004150118.1;Parent=gene-NLI98_RS01215;Dbxref=Genbank:WP_004150118.1;Name=WP_004150118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229329.1;locus_tag=NLI98_RS01215;product=MHS family MFS transporter;protein_id=WP_004150118.1;transl_table=11 NZ_CP100601.1 RefSeq gene 262097 263128 . - . ID=gene-NLI98_RS01220;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=NLI98_RS01220;old_locus_tag=NLI98_01220 NZ_CP100601.1 Protein Homology CDS 262097 263128 . - 0 ID=cds-WP_002921337.1;Parent=gene-NLI98_RS01220;Dbxref=Genbank:WP_002921337.1;Name=WP_002921337.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229328.1;locus_tag=NLI98_RS01220;product=inner membrane protein YhjD;protein_id=WP_002921337.1;transl_table=11 NZ_CP100601.1 RefSeq gene 263236 264135 . - . ID=gene-NLI98_RS01225;Name=NLI98_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01225;old_locus_tag=NLI98_01225 NZ_CP100601.1 Protein Homology CDS 263236 264135 . - 0 ID=cds-WP_004145179.1;Parent=gene-NLI98_RS01225;Dbxref=Genbank:WP_004145179.1;Name=WP_004145179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229327.1;locus_tag=NLI98_RS01225;product=LysR family transcriptional regulator;protein_id=WP_004145179.1;transl_table=11 NZ_CP100601.1 RefSeq gene 264255 265013 . + . ID=gene-NLI98_RS01230;Name=NLI98_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01230;old_locus_tag=NLI98_01230 NZ_CP100601.1 Protein Homology CDS 264255 265013 . + 0 ID=cds-WP_004211228.1;Parent=gene-NLI98_RS01230;Dbxref=Genbank:WP_004211228.1;Name=WP_004211228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229326.1;locus_tag=NLI98_RS01230;product=SDR family oxidoreductase;protein_id=WP_004211228.1;transl_table=11 NZ_CP100601.1 RefSeq gene 265048 265581 . - . ID=gene-NLI98_RS01235;Name=NLI98_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01235;old_locus_tag=NLI98_01235 NZ_CP100601.1 Protein Homology CDS 265048 265581 . - 0 ID=cds-WP_002921333.1;Parent=gene-NLI98_RS01235;Dbxref=Genbank:WP_002921333.1;Name=WP_002921333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229325.1;locus_tag=NLI98_RS01235;product=GNAT family N-acetyltransferase;protein_id=WP_002921333.1;transl_table=11 NZ_CP100601.1 RefSeq gene 265648 267300 . - . ID=gene-NLI98_RS01240;Name=NLI98_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01240;old_locus_tag=NLI98_01240 NZ_CP100601.1 Protein Homology CDS 265648 267300 . - 0 ID=cds-WP_002921331.1;Parent=gene-NLI98_RS01240;Dbxref=Genbank:WP_002921331.1;Name=WP_002921331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229324.1;locus_tag=NLI98_RS01240;product=alpha%2Calpha-trehalase;protein_id=WP_002921331.1;transl_table=11 NZ_CP100601.1 RefSeq gene 267540 268688 . - . ID=gene-NLI98_RS01245;Name=NLI98_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01245;old_locus_tag=NLI98_01245 NZ_CP100601.1 Protein Homology CDS 267540 268688 . - 0 ID=cds-WP_004889369.1;Parent=gene-NLI98_RS01245;Dbxref=Genbank:WP_004889369.1;Name=WP_004889369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229323.1;locus_tag=NLI98_RS01245;product=iron-containing alcohol dehydrogenase;protein_id=WP_004889369.1;transl_table=11 NZ_CP100601.1 RefSeq gene 268815 269438 . + . ID=gene-NLI98_RS01250;Name=NLI98_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01250;old_locus_tag=NLI98_01250 NZ_CP100601.1 Protein Homology CDS 268815 269438 . + 0 ID=cds-WP_002921273.1;Parent=gene-NLI98_RS01250;Dbxref=Genbank:WP_002921273.1;Name=WP_002921273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540364.1;locus_tag=NLI98_RS01250;product=glutathione S-transferase;protein_id=WP_002921273.1;transl_table=11 NZ_CP100601.1 RefSeq gene 269492 270844 . - . ID=gene-NLI98_RS01255;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=NLI98_RS01255;old_locus_tag=NLI98_01255 NZ_CP100601.1 Protein Homology CDS 269492 270844 . - 0 ID=cds-WP_002921271.1;Parent=gene-NLI98_RS01255;Dbxref=Genbank:WP_002921271.1;Name=WP_002921271.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=NLI98_RS01255;product=glutathione-disulfide reductase;protein_id=WP_002921271.1;transl_table=11 NZ_CP100601.1 RefSeq gene 270917 271759 . - . ID=gene-NLI98_RS01260;Name=NLI98_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01260;old_locus_tag=NLI98_01260 NZ_CP100601.1 Protein Homology CDS 270917 271759 . - 0 ID=cds-WP_002921269.1;Parent=gene-NLI98_RS01260;Dbxref=Genbank:WP_002921269.1;Name=WP_002921269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229320.1;locus_tag=NLI98_RS01260;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_002921269.1;transl_table=11 NZ_CP100601.1 RefSeq gene 271953 273224 . + . ID=gene-NLI98_RS01265;Name=NLI98_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01265;old_locus_tag=NLI98_01265 NZ_CP100601.1 Protein Homology CDS 271953 273224 . + 0 ID=cds-WP_032418291.1;Parent=gene-NLI98_RS01265;Dbxref=Genbank:WP_032418291.1;Name=WP_032418291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004211237.1;locus_tag=NLI98_RS01265;product=phosphatase PAP2 family protein;protein_id=WP_032418291.1;transl_table=11 NZ_CP100601.1 RefSeq gene 273407 275449 . + . ID=gene-NLI98_RS01270;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=NLI98_RS01270;old_locus_tag=NLI98_01270 NZ_CP100601.1 Protein Homology CDS 273407 275449 . + 0 ID=cds-WP_004151426.1;Parent=gene-NLI98_RS01270;Dbxref=Genbank:WP_004151426.1;Name=WP_004151426.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317218.1;locus_tag=NLI98_RS01270;product=oligopeptidase A;protein_id=WP_004151426.1;transl_table=11 NZ_CP100601.1 RefSeq gene 275457 276209 . + . ID=gene-NLI98_RS01275;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=NLI98_RS01275;old_locus_tag=NLI98_01275 NZ_CP100601.1 Protein Homology CDS 275457 276209 . + 0 ID=cds-WP_020317213.1;Parent=gene-NLI98_RS01275;Dbxref=Genbank:WP_020317213.1;Name=WP_020317213.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000686619.1;locus_tag=NLI98_RS01275;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_020317213.1;transl_table=11 NZ_CP100601.1 RefSeq gene 276339 277811 . - . ID=gene-NLI98_RS01280;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=NLI98_RS01280;old_locus_tag=NLI98_01280 NZ_CP100601.1 Protein Homology CDS 276339 277811 . - 0 ID=cds-WP_004188264.1;Parent=gene-NLI98_RS01280;Dbxref=Genbank:WP_004188264.1;Name=WP_004188264.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188264.1;locus_tag=NLI98_RS01280;product=dipeptide/tripeptide permease DtpB;protein_id=WP_004188264.1;transl_table=11 NZ_CP100601.1 RefSeq gene 278068 278505 . - . ID=gene-NLI98_RS01285;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=NLI98_RS01285;old_locus_tag=NLI98_01285 NZ_CP100601.1 Protein Homology CDS 278068 278505 . - 0 ID=cds-WP_088498481.1;Parent=gene-NLI98_RS01285;Dbxref=Genbank:WP_088498481.1;Name=WP_088498481.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229315.1;locus_tag=NLI98_RS01285;product=universal stress protein UspA;protein_id=WP_088498481.1;transl_table=11 NZ_CP100601.1 RefSeq gene 278888 279223 . + . ID=gene-NLI98_RS01290;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=NLI98_RS01290;old_locus_tag=NLI98_01290 NZ_CP100601.1 Protein Homology CDS 278888 279223 . + 0 ID=cds-WP_002921203.1;Parent=gene-NLI98_RS01290;Dbxref=Genbank:WP_002921203.1;Name=WP_002921203.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312393.1;locus_tag=NLI98_RS01290;product=universal stress protein UspB;protein_id=WP_002921203.1;transl_table=11 NZ_CP100601.1 RefSeq gene 279279 280775 . - . ID=gene-NLI98_RS01295;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=NLI98_RS01295;old_locus_tag=NLI98_01295 NZ_CP100601.1 Protein Homology CDS 279279 280775 . - 0 ID=cds-WP_002921200.1;Parent=gene-NLI98_RS01295;Dbxref=Genbank:WP_002921200.1;Name=WP_002921200.1;Ontology_term=GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229313.1;locus_tag=NLI98_RS01295;product=inorganic phosphate transporter PitA;protein_id=WP_002921200.1;transl_table=11 NZ_CP100601.1 RefSeq gene 281005 282198 . + . ID=gene-NLI98_RS01300;Name=NLI98_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01300;old_locus_tag=NLI98_01300 NZ_CP100601.1 Protein Homology CDS 281005 282198 . + 0 ID=cds-WP_016529349.1;Parent=gene-NLI98_RS01300;Dbxref=Genbank:WP_016529349.1;Name=WP_016529349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229312.1;locus_tag=NLI98_RS01300;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_016529349.1;transl_table=11 NZ_CP100601.1 RefSeq gene 282238 283251 . - . ID=gene-NLI98_RS01305;Name=NLI98_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01305;old_locus_tag=NLI98_01305 NZ_CP100601.1 Protein Homology CDS 282238 283251 . - 0 ID=cds-WP_004181490.1;Parent=gene-NLI98_RS01305;Dbxref=Genbank:WP_004181490.1;Name=WP_004181490.1;Ontology_term=GO:0006812,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229311.1;locus_tag=NLI98_RS01305;product=magnesium transporter;protein_id=WP_004181490.1;transl_table=11 NZ_CP100601.1 cmsearch riboswitch 283309 283490 . - . ID=id-NZ_CP100601.1:283309..283490;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100601.1 RefSeq gene 283658 284017 . + . ID=gene-NLI98_RS01310;Name=NLI98_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01310;old_locus_tag=NLI98_01310 NZ_CP100601.1 Protein Homology CDS 283658 284017 . + 0 ID=cds-WP_004181489.1;Parent=gene-NLI98_RS01310;Dbxref=Genbank:WP_004181489.1;Name=WP_004181489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181489.1;locus_tag=NLI98_RS01310;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_004181489.1;transl_table=11 NZ_CP100601.1 RefSeq gene 284045 284446 . - . ID=gene-NLI98_RS01315;Name=nikR;gbkey=Gene;gene=nikR;gene_biotype=protein_coding;locus_tag=NLI98_RS01315;old_locus_tag=NLI98_01315 NZ_CP100601.1 Protein Homology CDS 284045 284446 . - 0 ID=cds-WP_004181488.1;Parent=gene-NLI98_RS01315;Dbxref=Genbank:WP_004181488.1;Name=WP_004181488.1;Ontology_term=GO:0006355,GO:0010045,GO:0003677,GO:0016151;gbkey=CDS;gene=nikR;go_function=DNA binding|0003677||IEA,nickel cation binding|0016151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to nickel cation|0010045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145160.1;locus_tag=NLI98_RS01315;product=nickel-responsive transcriptional regulator NikR;protein_id=WP_004181488.1;transl_table=11 NZ_CP100601.1 RefSeq gene 284434 285225 . - . ID=gene-NLI98_RS01320;Name=nikE;gbkey=Gene;gene=nikE;gene_biotype=protein_coding;locus_tag=NLI98_RS01320;old_locus_tag=NLI98_01320 NZ_CP100601.1 Protein Homology CDS 284434 285225 . - 0 ID=cds-WP_004173958.1;Parent=gene-NLI98_RS01320;Dbxref=Genbank:WP_004173958.1;Name=WP_004173958.1;Ontology_term=GO:0015675,GO:0005524,GO:0015413,GO:0009898,GO:0043190;gbkey=CDS;gene=nikE;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type nickel transporter activity|0015413||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229309.1;locus_tag=NLI98_RS01320;product=nickel import ATP-binding protein NikE;protein_id=WP_004173958.1;transl_table=11 NZ_CP100601.1 RefSeq gene 285222 285986 . - . ID=gene-NLI98_RS01325;Name=NLI98_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01325;old_locus_tag=NLI98_01325 NZ_CP100601.1 Protein Homology CDS 285222 285986 . - 0 ID=cds-WP_004173959.1;Parent=gene-NLI98_RS01325;Dbxref=Genbank:WP_004173959.1;Name=WP_004173959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229308.1;locus_tag=NLI98_RS01325;product=nickel import ATP-binding protein NikD;protein_id=WP_004173959.1;transl_table=11 NZ_CP100601.1 RefSeq gene 285986 286819 . - . ID=gene-NLI98_RS01330;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=NLI98_RS01330;old_locus_tag=NLI98_01330 NZ_CP100601.1 Protein Homology CDS 285986 286819 . - 0 ID=cds-WP_020801999.1;Parent=gene-NLI98_RS01330;Dbxref=Genbank:WP_020801999.1;Name=WP_020801999.1;Ontology_term=GO:0055085,GO:0015099,GO:0016020;gbkey=CDS;gene=nikC;go_component=membrane|0016020||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229307.1;locus_tag=NLI98_RS01330;product=nickel ABC transporter permease subunit NikC;protein_id=WP_020801999.1;transl_table=11 NZ_CP100601.1 RefSeq gene 286816 287760 . - . ID=gene-NLI98_RS01335;Name=nikB;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=NLI98_RS01335;old_locus_tag=NLI98_01335 NZ_CP100601.1 Protein Homology CDS 286816 287760 . - 0 ID=cds-WP_004150102.1;Parent=gene-NLI98_RS01335;Dbxref=Genbank:WP_004150102.1;Name=WP_004150102.1;gbkey=CDS;gene=nikB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229306.1;locus_tag=NLI98_RS01335;product=nickel ABC transporter permease subunit NikB;protein_id=WP_004150102.1;transl_table=11 NZ_CP100601.1 RefSeq gene 287760 289328 . - . ID=gene-NLI98_RS01340;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=NLI98_RS01340;old_locus_tag=NLI98_01340 NZ_CP100601.1 Protein Homology CDS 287760 289328 . - 0 ID=cds-WP_088498482.1;Parent=gene-NLI98_RS01340;Dbxref=Genbank:WP_088498482.1;Name=WP_088498482.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=nikA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229305.1;locus_tag=NLI98_RS01340;product=nickel ABC transporter substrate-binding protein;protein_id=WP_088498482.1;transl_table=11 NZ_CP100601.1 RefSeq gene 289467 290327 . - . ID=gene-NLI98_RS01345;Name=NLI98_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01345;old_locus_tag=NLI98_01345 NZ_CP100601.1 Protein Homology CDS 289467 290327 . - 0 ID=cds-WP_019705029.1;Parent=gene-NLI98_RS01345;Dbxref=Genbank:WP_019705029.1;Name=WP_019705029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229304.1;locus_tag=NLI98_RS01345;product=LysR family transcriptional regulator;protein_id=WP_019705029.1;transl_table=11 NZ_CP100601.1 RefSeq gene 290425 290931 . + . ID=gene-NLI98_RS01350;Name=NLI98_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01350;old_locus_tag=NLI98_01350 NZ_CP100601.1 Protein Homology CDS 290425 290931 . + 0 ID=cds-WP_004181483.1;Parent=gene-NLI98_RS01350;Dbxref=Genbank:WP_004181483.1;Name=WP_004181483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229303.1;locus_tag=NLI98_RS01350;product=phenolic acid decarboxylase;protein_id=WP_004181483.1;transl_table=11 NZ_CP100601.1 RefSeq gene 291328 292467 . + . ID=gene-NLI98_RS01355;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=NLI98_RS01355;old_locus_tag=NLI98_01355 NZ_CP100601.1 Protein Homology CDS 291328 292467 . + 0 ID=cds-WP_032437360.1;Parent=gene-NLI98_RS01355;Dbxref=Genbank:WP_032437360.1;Name=WP_032437360.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229302.1;locus_tag=NLI98_RS01355;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_032437360.1;transl_table=11 NZ_CP100601.1 RefSeq gene 292469 293452 . + . ID=gene-NLI98_RS01360;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=NLI98_RS01360;old_locus_tag=NLI98_01360 NZ_CP100601.1 Protein Homology CDS 292469 293452 . + 0 ID=cds-WP_002921035.1;Parent=gene-NLI98_RS01360;Dbxref=Genbank:WP_002921035.1;Name=WP_002921035.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229301.1;locus_tag=NLI98_RS01360;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_002921035.1;transl_table=11 NZ_CP100601.1 RefSeq gene 293449 295434 . + . ID=gene-NLI98_RS01365;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=NLI98_RS01365;old_locus_tag=NLI98_01365 NZ_CP100601.1 Protein Homology CDS 293449 295434 . + 0 ID=cds-WP_002921032.1;Parent=gene-NLI98_RS01365;Dbxref=Genbank:WP_002921032.1;Name=WP_002921032.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229300.1;locus_tag=NLI98_RS01365;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_002921032.1;transl_table=11 NZ_CP100601.1 RefSeq gene 295431 296333 . + . ID=gene-NLI98_RS01370;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=NLI98_RS01370;old_locus_tag=NLI98_01370 NZ_CP100601.1 Protein Homology CDS 295431 296333 . + 0 ID=cds-WP_009308746.1;Parent=gene-NLI98_RS01370;Dbxref=Genbank:WP_009308746.1;Name=WP_009308746.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229299.1;locus_tag=NLI98_RS01370;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_009308746.1;transl_table=11 NZ_CP100601.1 RefSeq gene 296333 297988 . + . ID=gene-NLI98_RS01375;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=NLI98_RS01375;old_locus_tag=NLI98_01375 NZ_CP100601.1 Protein Homology CDS 296333 297988 . + 0 ID=cds-WP_102024144.1;Parent=gene-NLI98_RS01375;Dbxref=Genbank:WP_102024144.1;Name=WP_102024144.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229298.1;locus_tag=NLI98_RS01375;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_102024144.1;transl_table=11 NZ_CP100601.1 RefSeq gene 297985 298323 . + . ID=gene-NLI98_RS01380;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=NLI98_RS01380;old_locus_tag=NLI98_01380 NZ_CP100601.1 Protein Homology CDS 297985 298323 . + 0 ID=cds-WP_088498484.1;Parent=gene-NLI98_RS01380;Dbxref=Genbank:WP_088498484.1;Name=WP_088498484.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229297.1;locus_tag=NLI98_RS01380;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_088498484.1;transl_table=11 NZ_CP100601.1 RefSeq gene 298323 298703 . + . ID=gene-NLI98_RS01385;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=NLI98_RS01385;old_locus_tag=NLI98_01385 NZ_CP100601.1 Protein Homology CDS 298323 298703 . + 0 ID=cds-WP_002920863.1;Parent=gene-NLI98_RS01385;Dbxref=Genbank:WP_002920863.1;Name=WP_002920863.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229296.1;locus_tag=NLI98_RS01385;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_002920863.1;transl_table=11 NZ_CP100601.1 RefSeq gene 298700 299749 . - . ID=gene-NLI98_RS01390;Name=NLI98_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01390;old_locus_tag=NLI98_01390 NZ_CP100601.1 Protein Homology CDS 298700 299749 . - 0 ID=cds-WP_004145147.1;Parent=gene-NLI98_RS01390;Dbxref=Genbank:WP_004145147.1;Name=WP_004145147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462483.1;locus_tag=NLI98_RS01390;product=AI-2E family transporter;protein_id=WP_004145147.1;transl_table=11 NZ_CP100601.1 RefSeq gene 299883 301103 . + . ID=gene-NLI98_RS01395;Name=NLI98_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01395;old_locus_tag=NLI98_01395 NZ_CP100601.1 Protein Homology CDS 299883 301103 . + 0 ID=cds-WP_088498485.1;Parent=gene-NLI98_RS01395;Dbxref=Genbank:WP_088498485.1;Name=WP_088498485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229293.1;locus_tag=NLI98_RS01395;product=MFS transporter;protein_id=WP_088498485.1;transl_table=11 NZ_CP100601.1 RefSeq gene 301104 301661 . - . ID=gene-NLI98_RS01400;Name=NLI98_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01400;old_locus_tag=NLI98_01400 NZ_CP100601.1 Protein Homology CDS 301104 301661 . - 0 ID=cds-WP_002920861.1;Parent=gene-NLI98_RS01400;Dbxref=Genbank:WP_002920861.1;Name=WP_002920861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229292.1;locus_tag=NLI98_RS01400;product=DcrB family lipoprotein;protein_id=WP_002920861.1;transl_table=11 NZ_CP100601.1 RefSeq gene 301735 302400 . - . ID=gene-NLI98_RS01405;Name=NLI98_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01405;old_locus_tag=NLI98_01405 NZ_CP100601.1 Protein Homology CDS 301735 302400 . - 0 ID=cds-WP_002920860.1;Parent=gene-NLI98_RS01405;Dbxref=Genbank:WP_002920860.1;Name=WP_002920860.1;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229291.1;locus_tag=NLI98_RS01405;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_002920860.1;transl_table=11 NZ_CP100601.1 RefSeq gene 302607 302852 . + . ID=gene-NLI98_RS01410;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=NLI98_RS01410;old_locus_tag=NLI98_01410 NZ_CP100601.1 Protein Homology CDS 302607 302852 . + 0 ID=cds-WP_088498486.1;Parent=gene-NLI98_RS01410;Dbxref=Genbank:WP_088498486.1;Name=WP_088498486.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229290.1;locus_tag=NLI98_RS01410;product=sulfurtransferase TusA;protein_id=WP_088498486.1;transl_table=11 NZ_CP100601.1 RefSeq gene 302956 305166 . - . ID=gene-NLI98_RS01415;Name=zntA;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=NLI98_RS01415;old_locus_tag=NLI98_01415 NZ_CP100601.1 Protein Homology CDS 302956 305166 . - 0 ID=cds-WP_088498487.1;Parent=gene-NLI98_RS01415;Dbxref=Genbank:WP_088498487.1;Name=WP_088498487.1;Ontology_term=GO:0006812,GO:0005215,GO:0005524,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;gene=zntA;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229289.1;locus_tag=NLI98_RS01415;product=Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase ZntA;protein_id=WP_088498487.1;transl_table=11 NZ_CP100601.1 RefSeq gene 305245 305871 . - . ID=gene-NLI98_RS01420;Name=NLI98_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01420;old_locus_tag=NLI98_01420 NZ_CP100601.1 Protein Homology CDS 305245 305871 . - 0 ID=cds-WP_004181478.1;Parent=gene-NLI98_RS01420;Dbxref=Genbank:WP_004181478.1;Name=WP_004181478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229288.1;locus_tag=NLI98_RS01420;product=lysoplasmalogenase;protein_id=WP_004181478.1;transl_table=11 NZ_CP100601.1 RefSeq gene 306022 306372 . + . ID=gene-NLI98_RS01425;Name=NLI98_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01425;old_locus_tag=NLI98_01425 NZ_CP100601.1 Protein Homology CDS 306022 306372 . + 0 ID=cds-WP_004173989.1;Parent=gene-NLI98_RS01425;Dbxref=Genbank:WP_004173989.1;Name=WP_004173989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229287.1;locus_tag=NLI98_RS01425;product=DUF2500 domain-containing protein;protein_id=WP_004173989.1;transl_table=11 NZ_CP100601.1 RefSeq gene 306386 306661 . - . ID=gene-NLI98_RS01430;Name=NLI98_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01430;old_locus_tag=NLI98_01430 NZ_CP100601.1 Protein Homology CDS 306386 306661 . - 0 ID=cds-WP_002920822.1;Parent=gene-NLI98_RS01430;Dbxref=Genbank:WP_002920822.1;Name=WP_002920822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229286.1;locus_tag=NLI98_RS01430;product=DUF1145 family protein;protein_id=WP_002920822.1;transl_table=11 NZ_CP100601.1 RefSeq gene 306651 307247 . - . ID=gene-NLI98_RS01435;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=NLI98_RS01435;old_locus_tag=NLI98_01435 NZ_CP100601.1 Protein Homology CDS 306651 307247 . - 0 ID=cds-WP_002920820.1;Parent=gene-NLI98_RS01435;Dbxref=Genbank:WP_002920820.1;Name=WP_002920820.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229285.1;locus_tag=NLI98_RS01435;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_002920820.1;transl_table=11 NZ_CP100601.1 RefSeq gene 307430 308953 . + . ID=gene-NLI98_RS01440;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=NLI98_RS01440;old_locus_tag=NLI98_01440 NZ_CP100601.1 Protein Homology CDS 307430 308953 . + 0 ID=cds-WP_004181477.1;Parent=gene-NLI98_RS01440;Dbxref=Genbank:WP_004181477.1;Name=WP_004181477.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229284.1;locus_tag=NLI98_RS01440;product=signal recognition particle-docking protein FtsY;protein_id=WP_004181477.1;transl_table=11 NZ_CP100601.1 RefSeq gene 308956 309624 . + . ID=gene-NLI98_RS01445;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=NLI98_RS01445;old_locus_tag=NLI98_01445 NZ_CP100601.1 Protein Homology CDS 308956 309624 . + 0 ID=cds-WP_002920817.1;Parent=gene-NLI98_RS01445;Dbxref=Genbank:WP_002920817.1;Name=WP_002920817.1;gbkey=CDS;gene=ftsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229283.1;locus_tag=NLI98_RS01445;product=cell division ATP-binding protein FtsE;protein_id=WP_002920817.1;transl_table=11 NZ_CP100601.1 RefSeq gene 309617 310672 . + . ID=gene-NLI98_RS01450;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=NLI98_RS01450;old_locus_tag=NLI98_01450 NZ_CP100601.1 Protein Homology CDS 309617 310672 . + 0 ID=cds-WP_002920816.1;Parent=gene-NLI98_RS01450;Dbxref=Genbank:WP_002920816.1;Name=WP_002920816.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229282.1;locus_tag=NLI98_RS01450;product=permease-like cell division protein FtsX;protein_id=WP_002920816.1;transl_table=11 NZ_CP100601.1 RefSeq gene 310942 311796 . + . ID=gene-NLI98_RS01455;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=NLI98_RS01455;old_locus_tag=NLI98_01455 NZ_CP100601.1 Protein Homology CDS 310942 311796 . + 0 ID=cds-WP_002920815.1;Parent=gene-NLI98_RS01455;Dbxref=Genbank:WP_002920815.1;Name=WP_002920815.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458573.1;locus_tag=NLI98_RS01455;product=RNA polymerase sigma factor RpoH;protein_id=WP_002920815.1;transl_table=11 NZ_CP100601.1 RefSeq gene 311849 313372 . - . ID=gene-NLI98_RS01460;Name=NLI98_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01460;old_locus_tag=NLI98_01460 NZ_CP100601.1 Protein Homology CDS 311849 313372 . - 0 ID=cds-WP_088498488.1;Parent=gene-NLI98_RS01460;Dbxref=Genbank:WP_088498488.1;Name=WP_088498488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229280.1;locus_tag=NLI98_RS01460;product=PLP-dependent aminotransferase family protein;protein_id=WP_088498488.1;transl_table=11 NZ_CP100601.1 RefSeq gene 313491 314756 . + . ID=gene-NLI98_RS01465;Name=NLI98_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01465;old_locus_tag=NLI98_01465 NZ_CP100601.1 Protein Homology CDS 313491 314756 . + 0 ID=cds-WP_002920814.1;Parent=gene-NLI98_RS01465;Dbxref=Genbank:WP_002920814.1;Name=WP_002920814.1;Ontology_term=GO:0009448,GO:0003867,GO:0030170;gbkey=CDS;go_function=4-aminobutyrate transaminase activity|0003867||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229279.1;locus_tag=NLI98_RS01465;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_002920814.1;transl_table=11 NZ_CP100601.1 RefSeq gene 314904 316148 . + . ID=gene-NLI98_RS01470;Name=NLI98_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01470;old_locus_tag=NLI98_01470 NZ_CP100601.1 Protein Homology CDS 314904 316148 . + 0 ID=cds-WP_004150081.1;Parent=gene-NLI98_RS01470;Dbxref=Genbank:WP_004150081.1;Name=WP_004150081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229278.1;locus_tag=NLI98_RS01470;product=amino acid permease;protein_id=WP_004150081.1;transl_table=11 NZ_CP100601.1 RefSeq gene 316406 317509 . + . ID=gene-NLI98_RS01475;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=NLI98_RS01475;old_locus_tag=NLI98_01475 NZ_CP100601.1 Protein Homology CDS 316406 317509 . + 0 ID=cds-WP_088498489.1;Parent=gene-NLI98_RS01475;Dbxref=Genbank:WP_088498489.1;Name=WP_088498489.1;gbkey=CDS;gene=livJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229277.1;locus_tag=NLI98_RS01475;product=branched chain amino acid ABC transporter substrate-binding protein LivJ;protein_id=WP_088498489.1;transl_table=11 NZ_CP100601.1 RefSeq gene 318152 318535 . - . ID=gene-NLI98_RS01480;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=NLI98_RS01480;old_locus_tag=NLI98_01480 NZ_CP100601.1 Protein Homology CDS 318152 318535 . - 0 ID=cds-WP_019704664.1;Parent=gene-NLI98_RS01480;Dbxref=Genbank:WP_019704664.1;Name=WP_019704664.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229276.1;locus_tag=NLI98_RS01480;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_019704664.1;transl_table=11 NZ_CP100601.1 RefSeq gene 318959 320068 . + . ID=gene-NLI98_RS01485;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=NLI98_RS01485;old_locus_tag=NLI98_01485 NZ_CP100601.1 Protein Homology CDS 318959 320068 . + 0 ID=cds-WP_002920808.1;Parent=gene-NLI98_RS01485;Dbxref=Genbank:WP_002920808.1;Name=WP_002920808.1;gbkey=CDS;gene=livK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229273.1;locus_tag=NLI98_RS01485;product=high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK;protein_id=WP_002920808.1;transl_table=11 NZ_CP100601.1 RefSeq gene 320130 321056 . + . ID=gene-NLI98_RS01490;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=NLI98_RS01490;old_locus_tag=NLI98_01490 NZ_CP100601.1 Protein Homology CDS 320130 321056 . + 0 ID=cds-WP_002920807.1;Parent=gene-NLI98_RS01490;Dbxref=Genbank:WP_002920807.1;Name=WP_002920807.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010436488.1;locus_tag=NLI98_RS01490;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_002920807.1;transl_table=11 NZ_CP100601.1 RefSeq gene 321053 322330 . + . ID=gene-NLI98_RS01495;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=NLI98_RS01495;old_locus_tag=NLI98_01495 NZ_CP100601.1 Protein Homology CDS 321053 322330 . + 0 ID=cds-WP_004174005.1;Parent=gene-NLI98_RS01495;Dbxref=Genbank:WP_004174005.1;Name=WP_004174005.1;gbkey=CDS;gene=livM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229271.1;locus_tag=NLI98_RS01495;product=branched chain amino acid ABC transporter permease LivM;protein_id=WP_004174005.1;transl_table=11 NZ_CP100601.1 RefSeq gene 322327 323094 . + . ID=gene-NLI98_RS01500;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=NLI98_RS01500;old_locus_tag=NLI98_01500 NZ_CP100601.1 Protein Homology CDS 322327 323094 . + 0 ID=cds-WP_002920803.1;Parent=gene-NLI98_RS01500;Dbxref=Genbank:WP_002920803.1;Name=WP_002920803.1;gbkey=CDS;gene=livG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000084170.1;locus_tag=NLI98_RS01500;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_002920803.1;transl_table=11 NZ_CP100601.1 RefSeq gene 323096 323809 . + . ID=gene-NLI98_RS01505;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=NLI98_RS01505;old_locus_tag=NLI98_01505 NZ_CP100601.1 Protein Homology CDS 323096 323809 . + 0 ID=cds-WP_004145133.1;Parent=gene-NLI98_RS01505;Dbxref=Genbank:WP_004145133.1;Name=WP_004145133.1;gbkey=CDS;gene=livF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229269.1;locus_tag=NLI98_RS01505;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF;protein_id=WP_004145133.1;transl_table=11 NZ_CP100601.1 RefSeq gene 323973 324194 . + . ID=gene-NLI98_RS01510;Name=NLI98_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01510;old_locus_tag=NLI98_01510 NZ_CP100601.1 Protein Homology CDS 323973 324194 . + 0 ID=cds-WP_004174006.1;Parent=gene-NLI98_RS01510;Dbxref=Genbank:WP_004174006.1;Name=WP_004174006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229268.1;locus_tag=NLI98_RS01510;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_004174006.1;transl_table=11 NZ_CP100601.1 RefSeq gene 324191 324559 . + . ID=gene-NLI98_RS01515;Name=NLI98_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01515;old_locus_tag=NLI98_01515 NZ_CP100601.1 Protein Homology CDS 324191 324559 . + 0 ID=cds-WP_002920800.1;Parent=gene-NLI98_RS01515;Dbxref=Genbank:WP_002920800.1;Name=WP_002920800.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229267.1;locus_tag=NLI98_RS01515;product=type II toxin-antitoxin system death-on-curing family toxin;protein_id=WP_002920800.1;transl_table=11 NZ_CP100601.1 RefSeq gene 324832 326148 . + . ID=gene-NLI98_RS01520;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=NLI98_RS01520;old_locus_tag=NLI98_01520 NZ_CP100601.1 Protein Homology CDS 324832 326148 . + 0 ID=cds-WP_004174008.1;Parent=gene-NLI98_RS01520;Dbxref=Genbank:WP_004174008.1;Name=WP_004174008.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229266.1;locus_tag=NLI98_RS01520;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_004174008.1;transl_table=11 NZ_CP100601.1 RefSeq gene 326255 327142 . + . ID=gene-NLI98_RS01525;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=NLI98_RS01525;old_locus_tag=NLI98_01525 NZ_CP100601.1 Protein Homology CDS 326255 327142 . + 0 ID=cds-WP_002920792.1;Parent=gene-NLI98_RS01525;Dbxref=Genbank:WP_002920792.1;Name=WP_002920792.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000099274.1;locus_tag=NLI98_RS01525;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_002920792.1;transl_table=11 NZ_CP100601.1 RefSeq gene 327139 327984 . + . ID=gene-NLI98_RS01530;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=NLI98_RS01530;old_locus_tag=NLI98_01530 NZ_CP100601.1 Protein Homology CDS 327139 327984 . + 0 ID=cds-WP_088498490.1;Parent=gene-NLI98_RS01530;Dbxref=Genbank:WP_088498490.1;Name=WP_088498490.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572177.1;locus_tag=NLI98_RS01530;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_088498490.1;transl_table=11 NZ_CP100601.1 RefSeq gene 327986 329056 . + . ID=gene-NLI98_RS01535;Name=NLI98_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01535;old_locus_tag=NLI98_01535 NZ_CP100601.1 Protein Homology CDS 327986 329056 . + 0 ID=cds-WP_004150074.1;Parent=gene-NLI98_RS01535;Dbxref=Genbank:WP_004150074.1;Name=WP_004150074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229263.1;locus_tag=NLI98_RS01535;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_004150074.1;transl_table=11 NZ_CP100601.1 RefSeq gene 329053 329793 . + . ID=gene-NLI98_RS01540;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=NLI98_RS01540;old_locus_tag=NLI98_01540 NZ_CP100601.1 Protein Homology CDS 329053 329793 . + 0 ID=cds-WP_088498491.1;Parent=gene-NLI98_RS01540;Dbxref=Genbank:WP_088498491.1;Name=WP_088498491.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229262.1;locus_tag=NLI98_RS01540;product=glycerophosphodiester phosphodiesterase;protein_id=WP_088498491.1;transl_table=11 NZ_CP100601.1 RefSeq gene 329817 330137 . - . ID=gene-NLI98_RS01545;Name=NLI98_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01545;old_locus_tag=NLI98_01545 NZ_CP100601.1 Protein Homology CDS 329817 330137 . - 0 ID=cds-WP_088498492.1;Parent=gene-NLI98_RS01545;Dbxref=Genbank:WP_088498492.1;Name=WP_088498492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229261.1;locus_tag=NLI98_RS01545;product=DUF2756 family protein;protein_id=WP_088498492.1;transl_table=11 NZ_CP100601.1 RefSeq gene 330261 332006 . + . ID=gene-NLI98_RS01550;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=NLI98_RS01550;old_locus_tag=NLI98_01550 NZ_CP100601.1 Protein Homology CDS 330261 332006 . + 0 ID=cds-WP_048991169.1;Parent=gene-NLI98_RS01550;Dbxref=Genbank:WP_048991169.1;Name=WP_048991169.1;Ontology_term=GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229260.1;locus_tag=NLI98_RS01550;product=gamma-glutamyltransferase;protein_id=WP_048991169.1;transl_table=11 NZ_CP100601.1 RefSeq gene 332096 332584 . - . ID=gene-NLI98_RS01555;Name=yhhY;gbkey=Gene;gene=yhhY;gene_biotype=protein_coding;locus_tag=NLI98_RS01555;old_locus_tag=NLI98_01555 NZ_CP100601.1 Protein Homology CDS 332096 332584 . - 0 ID=cds-WP_004181470.1;Parent=gene-NLI98_RS01555;Dbxref=Genbank:WP_004181470.1;Name=WP_004181470.1;Ontology_term=GO:0008080;gbkey=CDS;gene=yhhY;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462447.1;locus_tag=NLI98_RS01555;product=N-acetyltransferase;protein_id=WP_004181470.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 332812 333465 . - . ID=gene-NLI98_RS01560;Name=NLI98_RS01560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS01560;old_locus_tag=NLI98_01560;pseudo=true NZ_CP100601.1 Protein Homology CDS 332812 333465 . - 0 ID=cds-NLI98_RS01560;Parent=gene-NLI98_RS01560;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145122.1;locus_tag=NLI98_RS01560;product=polymer-forming cytoskeletal protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 333730 334767 . + . ID=gene-NLI98_RS01565;Name=NLI98_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01565;old_locus_tag=NLI98_01565 NZ_CP100601.1 Protein Homology CDS 333730 334767 . + 0 ID=cds-WP_088498493.1;Parent=gene-NLI98_RS01565;Dbxref=Genbank:WP_088498493.1;Name=WP_088498493.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229257.1;locus_tag=NLI98_RS01565;product=oxidoreductase;protein_id=WP_088498493.1;transl_table=11 NZ_CP100601.1 RefSeq gene 334889 335584 . + . ID=gene-NLI98_RS01570;Name=NLI98_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01570;old_locus_tag=NLI98_01570 NZ_CP100601.1 Protein Homology CDS 334889 335584 . + 0 ID=cds-WP_002920779.1;Parent=gene-NLI98_RS01570;Dbxref=Genbank:WP_002920779.1;Name=WP_002920779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213399.1;locus_tag=NLI98_RS01570;product=pirin family protein;protein_id=WP_002920779.1;transl_table=11 NZ_CP100601.1 RefSeq gene 335698 336693 . + . ID=gene-NLI98_RS01575;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=NLI98_RS01575;old_locus_tag=NLI98_01575 NZ_CP100601.1 Protein Homology CDS 335698 336693 . + 0 ID=cds-WP_002920777.1;Parent=gene-NLI98_RS01575;Dbxref=Genbank:WP_002920777.1;Name=WP_002920777.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001693277.1;locus_tag=NLI98_RS01575;product=gluconate operon transcriptional repressor GntR;protein_id=WP_002920777.1;transl_table=11 NZ_CP100601.1 RefSeq gene 336874 337404 . + . ID=gene-NLI98_RS01580;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=NLI98_RS01580;old_locus_tag=NLI98_01580 NZ_CP100601.1 Protein Homology CDS 336874 337404 . + 0 ID=cds-WP_002920775.1;Parent=gene-NLI98_RS01580;Dbxref=Genbank:WP_002920775.1;Name=WP_002920775.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229254.1;locus_tag=NLI98_RS01580;product=gluconokinase;protein_id=WP_002920775.1;transl_table=11 NZ_CP100601.1 RefSeq gene 337404 338744 . + . ID=gene-NLI98_RS01585;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=NLI98_RS01585;old_locus_tag=NLI98_01585 NZ_CP100601.1 Protein Homology CDS 337404 338744 . + 0 ID=cds-WP_002920773.1;Parent=gene-NLI98_RS01585;Dbxref=Genbank:WP_002920773.1;Name=WP_002920773.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229253.1;locus_tag=NLI98_RS01585;product=gluconate transporter;protein_id=WP_002920773.1;transl_table=11 NZ_CP100601.1 RefSeq gene 338741 339103 . - . ID=gene-NLI98_RS01590;Name=NLI98_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01590;old_locus_tag=NLI98_01590 NZ_CP100601.1 Protein Homology CDS 338741 339103 . - 0 ID=cds-WP_032421868.1;Parent=gene-NLI98_RS01590;Dbxref=Genbank:WP_032421868.1;Name=WP_032421868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229252.1;locus_tag=NLI98_RS01590;product=hypothetical protein;protein_id=WP_032421868.1;transl_table=11 NZ_CP100601.1 RefSeq gene 339207 340313 . + . ID=gene-NLI98_RS01595;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=NLI98_RS01595;old_locus_tag=NLI98_01595 NZ_CP100601.1 Protein Homology CDS 339207 340313 . + 0 ID=cds-WP_002920570.1;Parent=gene-NLI98_RS01595;Dbxref=Genbank:WP_002920570.1;Name=WP_002920570.1;Ontology_term=GO:0009089,GO:0004073;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229251.1;locus_tag=NLI98_RS01595;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_002920570.1;transl_table=11 NZ_CP100601.1 RefSeq gene 340552 342738 . + . ID=gene-NLI98_RS01600;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=NLI98_RS01600;old_locus_tag=NLI98_01600 NZ_CP100601.1 Protein Homology CDS 340552 342738 . + 0 ID=cds-WP_004150069.1;Parent=gene-NLI98_RS01600;Dbxref=Genbank:WP_004150069.1;Name=WP_004150069.1;Ontology_term=GO:0005978,GO:0003844;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229250.1;locus_tag=NLI98_RS01600;product=1%2C4-alpha-glucan branching enzyme;protein_id=WP_004150069.1;transl_table=11 NZ_CP100601.1 RefSeq gene 342735 344711 . + . ID=gene-NLI98_RS01605;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=NLI98_RS01605;old_locus_tag=NLI98_01605 NZ_CP100601.1 Protein Homology CDS 342735 344711 . + 0 ID=cds-WP_023285603.1;Parent=gene-NLI98_RS01605;Dbxref=Genbank:WP_023285603.1;Name=WP_023285603.1;Ontology_term=GO:0005980,GO:0004133;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229249.1;locus_tag=NLI98_RS01605;product=glycogen debranching protein GlgX;protein_id=WP_023285603.1;transl_table=11 NZ_CP100601.1 RefSeq gene 344792 346087 . + . ID=gene-NLI98_RS01610;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=NLI98_RS01610;old_locus_tag=NLI98_01610 NZ_CP100601.1 Protein Homology CDS 344792 346087 . + 0 ID=cds-WP_002920566.1;Parent=gene-NLI98_RS01610;Dbxref=Genbank:WP_002920566.1;Name=WP_002920566.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229248.1;locus_tag=NLI98_RS01610;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_002920566.1;transl_table=11 NZ_CP100601.1 RefSeq gene 346087 347520 . + . ID=gene-NLI98_RS01615;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=NLI98_RS01615;old_locus_tag=NLI98_01615 NZ_CP100601.1 Protein Homology CDS 346087 347520 . + 0 ID=cds-WP_002920564.1;Parent=gene-NLI98_RS01615;Dbxref=Genbank:WP_002920564.1;Name=WP_002920564.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=glycogen (starch) synthase activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229247.1;locus_tag=NLI98_RS01615;product=glycogen synthase GlgA;protein_id=WP_002920564.1;transl_table=11 NZ_CP100601.1 RefSeq gene 347538 349985 . + . ID=gene-NLI98_RS01620;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=NLI98_RS01620;old_locus_tag=NLI98_01620 NZ_CP100601.1 Protein Homology CDS 347538 349985 . + 0 ID=cds-WP_029884517.1;Parent=gene-NLI98_RS01620;Dbxref=Genbank:WP_029884517.1;Name=WP_029884517.1;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;gene=glgP;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229246.1;locus_tag=NLI98_RS01620;product=glycogen phosphorylase;protein_id=WP_029884517.1;transl_table=11 NZ_CP100601.1 RefSeq gene 350074 351582 . - . ID=gene-NLI98_RS01625;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=NLI98_RS01625;old_locus_tag=NLI98_01625 NZ_CP100601.1 Protein Homology CDS 350074 351582 . - 0 ID=cds-WP_002920554.1;Parent=gene-NLI98_RS01625;Dbxref=Genbank:WP_002920554.1;Name=WP_002920554.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229244.1;locus_tag=NLI98_RS01625;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_002920554.1;transl_table=11 NZ_CP100601.1 RefSeq gene 351787 352116 . + . ID=gene-NLI98_RS01630;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=NLI98_RS01630;old_locus_tag=NLI98_01630 NZ_CP100601.1 Protein Homology CDS 351787 352116 . + 0 ID=cds-WP_002920552.1;Parent=gene-NLI98_RS01630;Dbxref=Genbank:WP_002920552.1;Name=WP_002920552.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229243.1;locus_tag=NLI98_RS01630;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_002920552.1;transl_table=11 NZ_CP100601.1 RefSeq gene 352167 352997 . + . ID=gene-NLI98_RS01635;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=NLI98_RS01635;old_locus_tag=NLI98_01635 NZ_CP100601.1 Protein Homology CDS 352167 352997 . + 0 ID=cds-WP_004151408.1;Parent=gene-NLI98_RS01635;Dbxref=Genbank:WP_004151408.1;Name=WP_004151408.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229242.1;locus_tag=NLI98_RS01635;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_004151408.1;transl_table=11 NZ_CP100601.1 RefSeq gene 353047 353805 . + . ID=gene-NLI98_RS01640;Name=NLI98_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01640;old_locus_tag=NLI98_01640 NZ_CP100601.1 Protein Homology CDS 353047 353805 . + 0 ID=cds-WP_002920548.1;Parent=gene-NLI98_RS01640;Dbxref=Genbank:WP_002920548.1;Name=WP_002920548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815090.1;locus_tag=NLI98_RS01640;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_002920548.1;transl_table=11 NZ_CP100601.1 RefSeq gene 353821 356526 . - . ID=gene-NLI98_RS01645;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=NLI98_RS01645;old_locus_tag=NLI98_01645 NZ_CP100601.1 Protein Homology CDS 353821 356526 . - 0 ID=cds-WP_088498494.1;Parent=gene-NLI98_RS01645;Dbxref=Genbank:WP_088498494.1;Name=WP_088498494.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907024.1;locus_tag=NLI98_RS01645;product=HTH-type transcriptional regulator MalT;protein_id=WP_088498494.1;transl_table=11 NZ_CP100601.1 RefSeq gene 357151 359541 . + . ID=gene-NLI98_RS01650;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=NLI98_RS01650;old_locus_tag=NLI98_01650 NZ_CP100601.1 Protein Homology CDS 357151 359541 . + 0 ID=cds-WP_004151407.1;Parent=gene-NLI98_RS01650;Dbxref=Genbank:WP_004151407.1;Name=WP_004151407.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229239.1;locus_tag=NLI98_RS01650;product=maltodextrin phosphorylase;protein_id=WP_004151407.1;transl_table=11 NZ_CP100601.1 RefSeq gene 359552 361645 . + . ID=gene-NLI98_RS01655;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=NLI98_RS01655;old_locus_tag=NLI98_01655 NZ_CP100601.1 Protein Homology CDS 359552 361645 . + 0 ID=cds-WP_002920543.1;Parent=gene-NLI98_RS01655;Dbxref=Genbank:WP_002920543.1;Name=WP_002920543.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229238.1;locus_tag=NLI98_RS01655;product=4-alpha-glucanotransferase;protein_id=WP_002920543.1;transl_table=11 NZ_CP100601.1 RefSeq gene 361748 363064 . - . ID=gene-NLI98_RS01660;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=NLI98_RS01660;old_locus_tag=NLI98_01660 NZ_CP100601.1 Protein Homology CDS 361748 363064 . - 0 ID=cds-WP_002920542.1;Parent=gene-NLI98_RS01660;Dbxref=Genbank:WP_002920542.1;Name=WP_002920542.1;gbkey=CDS;gene=gntT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229237.1;locus_tag=NLI98_RS01660;product=gluconate transporter;protein_id=WP_002920542.1;transl_table=11 NZ_CP100601.1 RefSeq gene 363401 363976 . - . ID=gene-NLI98_RS01665;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=NLI98_RS01665;old_locus_tag=NLI98_01665 NZ_CP100601.1 Protein Homology CDS 363401 363976 . - 0 ID=cds-WP_002920540.1;Parent=gene-NLI98_RS01665;Dbxref=Genbank:WP_002920540.1;Name=WP_002920540.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=NLI98_RS01665;product=Fe-S biogenesis protein NfuA;protein_id=WP_002920540.1;transl_table=11 NZ_CP100601.1 RefSeq gene 364035 364709 . - . ID=gene-NLI98_RS01670;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=NLI98_RS01670;old_locus_tag=NLI98_01670 NZ_CP100601.1 Protein Homology CDS 364035 364709 . - 0 ID=cds-WP_004185961.1;Parent=gene-NLI98_RS01670;Dbxref=Genbank:WP_004185961.1;Name=WP_004185961.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000958738.1;locus_tag=NLI98_RS01670;product=DNA utilization protein GntX;protein_id=WP_004185961.1;transl_table=11 NZ_CP100601.1 RefSeq gene 364748 365521 . + . ID=gene-NLI98_RS01675;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=NLI98_RS01675;old_locus_tag=NLI98_01675 NZ_CP100601.1 Protein Homology CDS 364748 365521 . + 0 ID=cds-WP_004174021.1;Parent=gene-NLI98_RS01675;Dbxref=Genbank:WP_004174021.1;Name=WP_004174021.1;Ontology_term=GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807001.1;locus_tag=NLI98_RS01675;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_004174021.1;transl_table=11 NZ_CP100601.1 RefSeq gene 365642 365911 . + . ID=gene-NLI98_RS01680;Name=NLI98_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01680;old_locus_tag=NLI98_01680 NZ_CP100601.1 Protein Homology CDS 365642 365911 . + 0 ID=cds-WP_002920510.1;Parent=gene-NLI98_RS01680;Dbxref=Genbank:WP_002920510.1;Name=WP_002920510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229233.1;locus_tag=NLI98_RS01680;product=DUF1471 domain-containing protein;protein_id=WP_002920510.1;transl_table=11 NZ_CP100601.1 RefSeq gene 366000 366239 . - . ID=gene-NLI98_RS01685;Name=feoC;gbkey=Gene;gene=feoC;gene_biotype=protein_coding;locus_tag=NLI98_RS01685;old_locus_tag=NLI98_01685 NZ_CP100601.1 Protein Homology CDS 366000 366239 . - 0 ID=cds-WP_002920509.1;Parent=gene-NLI98_RS01685;Dbxref=Genbank:WP_002920509.1;Name=WP_002920509.1;gbkey=CDS;gene=feoC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229232.1;locus_tag=NLI98_RS01685;product=[Fe-S]-dependent transcriptional repressor FeoC;protein_id=WP_002920509.1;transl_table=11 NZ_CP100601.1 RefSeq gene 366249 368567 . - . ID=gene-NLI98_RS01690;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=NLI98_RS01690;old_locus_tag=NLI98_01690 NZ_CP100601.1 Protein Homology CDS 366249 368567 . - 0 ID=cds-WP_014906839.1;Parent=gene-NLI98_RS01690;Dbxref=Genbank:WP_014906839.1;Name=WP_014906839.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229231.1;locus_tag=NLI98_RS01690;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_014906839.1;transl_table=11 NZ_CP100601.1 RefSeq gene 368596 368823 . - . ID=gene-NLI98_RS01695;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=NLI98_RS01695;old_locus_tag=NLI98_01695 NZ_CP100601.1 Protein Homology CDS 368596 368823 . - 0 ID=cds-WP_002920506.1;Parent=gene-NLI98_RS01695;Dbxref=Genbank:WP_002920506.1;Name=WP_002920506.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126281.1;locus_tag=NLI98_RS01695;product=ferrous iron transporter A;protein_id=WP_002920506.1;transl_table=11 NZ_CP100601.1 RefSeq gene 369235 371565 . - . ID=gene-NLI98_RS01700;Name=NLI98_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01700;old_locus_tag=NLI98_01700 NZ_CP100601.1 Protein Homology CDS 369235 371565 . - 0 ID=cds-WP_004150056.1;Parent=gene-NLI98_RS01700;Dbxref=Genbank:WP_004150056.1;Name=WP_004150056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229229.1;locus_tag=NLI98_RS01700;product=RNA-binding transcriptional accessory protein;protein_id=WP_004150056.1;transl_table=11 NZ_CP100601.1 RefSeq gene 371666 372139 . - . ID=gene-NLI98_RS01705;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=NLI98_RS01705;old_locus_tag=NLI98_01705 NZ_CP100601.1 Protein Homology CDS 371666 372139 . - 0 ID=cds-WP_002920503.1;Parent=gene-NLI98_RS01705;Dbxref=Genbank:WP_002920503.1;Name=WP_002920503.1;Ontology_term=GO:0006354,GO:0003711;gbkey=CDS;gene=greB;go_function=transcription elongation factor activity|0003711||IEA;go_process=DNA-templated transcription elongation|0006354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015703675.1;locus_tag=NLI98_RS01705;product=transcription elongation factor GreB;protein_id=WP_002920503.1;transl_table=11 NZ_CP100601.1 RefSeq gene 372367 373086 . + . ID=gene-NLI98_RS01710;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=NLI98_RS01710;old_locus_tag=NLI98_01710 NZ_CP100601.1 Protein Homology CDS 372367 373086 . + 0 ID=cds-WP_001157751.1;Parent=gene-NLI98_RS01710;Dbxref=Genbank:WP_001157751.1;Name=WP_001157751.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014646135.1;locus_tag=NLI98_RS01710;product=two-component system response regulator OmpR;protein_id=WP_001157751.1;transl_table=11 NZ_CP100601.1 RefSeq gene 373083 374438 . + . ID=gene-NLI98_RS01715;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=NLI98_RS01715;old_locus_tag=NLI98_01715 NZ_CP100601.1 Protein Homology CDS 373083 374438 . + 0 ID=cds-WP_002920333.1;Parent=gene-NLI98_RS01715;Dbxref=Genbank:WP_002920333.1;Name=WP_002920333.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229226.1;locus_tag=NLI98_RS01715;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_002920333.1;transl_table=11 NZ_CP100601.1 RefSeq gene 374516 376138 . - . ID=gene-NLI98_RS01720;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=NLI98_RS01720;old_locus_tag=NLI98_01720 NZ_CP100601.1 Protein Homology CDS 374516 376138 . - 0 ID=cds-WP_088498496.1;Parent=gene-NLI98_RS01720;Dbxref=Genbank:WP_088498496.1;Name=WP_088498496.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229225.1;locus_tag=NLI98_RS01720;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_088498496.1;transl_table=11 NZ_CP100601.1 RefSeq gene 376499 377383 . - . ID=gene-NLI98_RS01725;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=NLI98_RS01725;old_locus_tag=NLI98_01725 NZ_CP100601.1 Protein Homology CDS 376499 377383 . - 0 ID=cds-WP_004188324.1;Parent=gene-NLI98_RS01725;Dbxref=Genbank:WP_004188324.1;Name=WP_004188324.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229223.1;locus_tag=NLI98_RS01725;product=Hsp33 family molecular chaperone HslO;protein_id=WP_004188324.1;transl_table=11 NZ_CP100601.1 RefSeq gene 377402 377803 . - . ID=gene-NLI98_RS01730;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=NLI98_RS01730;old_locus_tag=NLI98_01730 NZ_CP100601.1 Protein Homology CDS 377402 377803 . - 0 ID=cds-WP_002920326.1;Parent=gene-NLI98_RS01730;Dbxref=Genbank:WP_002920326.1;Name=WP_002920326.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229222.1;locus_tag=NLI98_RS01730;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_002920326.1;transl_table=11 NZ_CP100601.1 RefSeq gene 377800 378483 . - . ID=gene-NLI98_RS01735;Name=yrfG;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=NLI98_RS01735;old_locus_tag=NLI98_01735 NZ_CP100601.1 Protein Homology CDS 377800 378483 . - 0 ID=cds-WP_002920324.1;Parent=gene-NLI98_RS01735;Dbxref=Genbank:WP_002920324.1;Name=WP_002920324.1;gbkey=CDS;gene=yrfG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229221.1;locus_tag=NLI98_RS01735;product=GMP/IMP nucleotidase;protein_id=WP_002920324.1;transl_table=11 NZ_CP100601.1 RefSeq gene 378544 380673 . - . ID=gene-NLI98_RS01740;Name=NLI98_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01740;old_locus_tag=NLI98_01740 NZ_CP100601.1 Protein Homology CDS 378544 380673 . - 0 ID=cds-WP_004174025.1;Parent=gene-NLI98_RS01740;Dbxref=Genbank:WP_004174025.1;Name=WP_004174025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229220.1;locus_tag=NLI98_RS01740;product=intracellular growth attenuator family protein;protein_id=WP_004174025.1;transl_table=11 NZ_CP100601.1 RefSeq gene 380994 381554 . + . ID=gene-NLI98_RS01745;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=NLI98_RS01745;old_locus_tag=NLI98_01745 NZ_CP100601.1 Protein Homology CDS 380994 381554 . + 0 ID=cds-WP_088498497.1;Parent=gene-NLI98_RS01745;Dbxref=Genbank:WP_088498497.1;Name=WP_088498497.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312266.1;locus_tag=NLI98_RS01745;product=ADP compounds hydrolase NudE;protein_id=WP_088498497.1;transl_table=11 NZ_CP100601.1 RefSeq gene 381608 384166 . - . ID=gene-NLI98_RS01750;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=NLI98_RS01750;old_locus_tag=NLI98_01750 NZ_CP100601.1 Protein Homology CDS 381608 384166 . - 0 ID=cds-WP_004185951.1;Parent=gene-NLI98_RS01750;Dbxref=Genbank:WP_004185951.1;Name=WP_004185951.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312265.2;locus_tag=NLI98_RS01750;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_004185951.1;transl_table=11 NZ_CP100601.1 RefSeq gene 384285 385085 . + . ID=gene-NLI98_RS01755;Name=NLI98_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01755;old_locus_tag=NLI98_01755 NZ_CP100601.1 Protein Homology CDS 384285 385085 . + 0 ID=cds-WP_004872583.1;Parent=gene-NLI98_RS01755;Dbxref=Genbank:WP_004872583.1;Name=WP_004872583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229217.1;locus_tag=NLI98_RS01755;product=hypothetical protein;protein_id=WP_004872583.1;transl_table=11 NZ_CP100601.1 RefSeq gene 385069 385602 . + . ID=gene-NLI98_RS01760;Name=NLI98_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01760;old_locus_tag=NLI98_01760 NZ_CP100601.1 Protein Homology CDS 385069 385602 . + 0 ID=cds-WP_004174028.1;Parent=gene-NLI98_RS01760;Dbxref=Genbank:WP_004174028.1;Name=WP_004174028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229216.1;locus_tag=NLI98_RS01760;product=hypothetical protein;protein_id=WP_004174028.1;transl_table=11 NZ_CP100601.1 RefSeq gene 385592 386020 . + . ID=gene-NLI98_RS01765;Name=NLI98_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01765;old_locus_tag=NLI98_01765 NZ_CP100601.1 Protein Homology CDS 385592 386020 . + 0 ID=cds-WP_004889463.1;Parent=gene-NLI98_RS01765;Dbxref=Genbank:WP_004889463.1;Name=WP_004889463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229215.1;locus_tag=NLI98_RS01765;product=hypothetical protein;protein_id=WP_004889463.1;transl_table=11 NZ_CP100601.1 RefSeq gene 386010 386393 . + . ID=gene-NLI98_RS01770;Name=NLI98_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01770;old_locus_tag=NLI98_01770 NZ_CP100601.1 Protein Homology CDS 386010 386393 . + 0 ID=cds-WP_004889465.1;Parent=gene-NLI98_RS01770;Dbxref=Genbank:WP_004889465.1;Name=WP_004889465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004889465.1;locus_tag=NLI98_RS01770;product=HofP DNA utilization family protein;protein_id=WP_004889465.1;transl_table=11 NZ_CP100601.1 RefSeq gene 386326 387570 . + . ID=gene-NLI98_RS01775;Name=hofQ;gbkey=Gene;gene=hofQ;gene_biotype=protein_coding;locus_tag=NLI98_RS01775;old_locus_tag=NLI98_01775 NZ_CP100601.1 Protein Homology CDS 386326 387570 . + 0 ID=cds-WP_004174030.1;Parent=gene-NLI98_RS01775;Dbxref=Genbank:WP_004174030.1;Name=WP_004174030.1;Ontology_term=GO:0009306,GO:0019867;gbkey=CDS;gene=hofQ;go_component=outer membrane|0019867||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229214.1;locus_tag=NLI98_RS01775;product=DNA uptake porin HofQ;protein_id=WP_004174030.1;transl_table=11 NZ_CP100601.1 RefSeq gene 387841 388362 . + . ID=gene-NLI98_RS01780;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=NLI98_RS01780;old_locus_tag=NLI98_01780 NZ_CP100601.1 Protein Homology CDS 387841 388362 . + 0 ID=cds-WP_002920267.1;Parent=gene-NLI98_RS01780;Dbxref=Genbank:WP_002920267.1;Name=WP_002920267.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=NLI98_RS01780;product=shikimate kinase AroK;protein_id=WP_002920267.1;transl_table=11 NZ_CP100601.1 RefSeq gene 388418 389512 . + . ID=gene-NLI98_RS01785;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=NLI98_RS01785;old_locus_tag=NLI98_01785 NZ_CP100601.1 Protein Homology CDS 388418 389512 . + 0 ID=cds-WP_004150047.1;Parent=gene-NLI98_RS01785;Dbxref=Genbank:WP_004150047.1;Name=WP_004150047.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145321.1;locus_tag=NLI98_RS01785;product=3-dehydroquinate synthase;protein_id=WP_004150047.1;transl_table=11 NZ_CP100601.1 RefSeq gene 389597 390883 . + . ID=gene-NLI98_RS01790;Name=damX;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=NLI98_RS01790;old_locus_tag=NLI98_01790 NZ_CP100601.1 Protein Homology CDS 389597 390883 . + 0 ID=cds-WP_042938725.1;Parent=gene-NLI98_RS01790;Dbxref=Genbank:WP_042938725.1;Name=WP_042938725.1;Ontology_term=GO:0032506,GO:0042834;gbkey=CDS;gene=damX;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229211.1;locus_tag=NLI98_RS01790;product=cell division protein DamX;protein_id=WP_042938725.1;transl_table=11 NZ_CP100601.1 RefSeq gene 390962 391789 . + . ID=gene-NLI98_RS01795;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=NLI98_RS01795;old_locus_tag=NLI98_01795 NZ_CP100601.1 Protein Homology CDS 390962 391789 . + 0 ID=cds-WP_002920260.1;Parent=gene-NLI98_RS01795;Dbxref=Genbank:WP_002920260.1;Name=WP_002920260.1;Ontology_term=GO:0032775,GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA methylation on adenine|0032775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229210.1;locus_tag=NLI98_RS01795;product=adenine-specific DNA-methyltransferase;protein_id=WP_002920260.1;transl_table=11 NZ_CP100601.1 RefSeq gene 391807 392484 . + . ID=gene-NLI98_RS01800;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=NLI98_RS01800;old_locus_tag=NLI98_01800 NZ_CP100601.1 Protein Homology CDS 391807 392484 . + 0 ID=cds-WP_002920259.1;Parent=gene-NLI98_RS01800;Dbxref=Genbank:WP_002920259.1;Name=WP_002920259.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229209.1;locus_tag=NLI98_RS01800;product=ribulose-phosphate 3-epimerase;protein_id=WP_002920259.1;transl_table=11 NZ_CP100601.1 RefSeq gene 392477 393238 . + . ID=gene-NLI98_RS01805;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=NLI98_RS01805;old_locus_tag=NLI98_01805 NZ_CP100601.1 Protein Homology CDS 392477 393238 . + 0 ID=cds-WP_004188345.1;Parent=gene-NLI98_RS01805;Dbxref=Genbank:WP_004188345.1;Name=WP_004188345.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229208.1;locus_tag=NLI98_RS01805;product=phosphoglycolate phosphatase;protein_id=WP_004188345.1;transl_table=11 NZ_CP100601.1 RefSeq gene 393231 394235 . + . ID=gene-NLI98_RS01810;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=NLI98_RS01810;old_locus_tag=NLI98_01810 NZ_CP100601.1 Protein Homology CDS 393231 394235 . + 0 ID=cds-WP_002920253.1;Parent=gene-NLI98_RS01810;Dbxref=Genbank:WP_002920253.1;Name=WP_002920253.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229207.1;locus_tag=NLI98_RS01810;product=tryptophan--tRNA ligase;protein_id=WP_002920253.1;transl_table=11 NZ_CP100601.1 RefSeq gene 394308 395681 . - . ID=gene-NLI98_RS01815;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=NLI98_RS01815;old_locus_tag=NLI98_01815 NZ_CP100601.1 Protein Homology CDS 394308 395681 . - 0 ID=cds-WP_002920252.1;Parent=gene-NLI98_RS01815;Dbxref=Genbank:WP_002920252.1;Name=WP_002920252.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229206.1;locus_tag=NLI98_RS01815;product=siroheme synthase CysG;protein_id=WP_002920252.1;transl_table=11 NZ_CP100601.1 RefSeq gene 395835 396161 . - . ID=gene-NLI98_RS01820;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=NLI98_RS01820;old_locus_tag=NLI98_01820 NZ_CP100601.1 Protein Homology CDS 395835 396161 . - 0 ID=cds-WP_002920249.1;Parent=gene-NLI98_RS01820;Dbxref=Genbank:WP_002920249.1;Name=WP_002920249.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229205.1;locus_tag=NLI98_RS01820;product=nitrite reductase small subunit NirD;protein_id=WP_002920249.1;transl_table=11 NZ_CP100601.1 RefSeq gene 396158 398701 . - . ID=gene-NLI98_RS01825;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=NLI98_RS01825;old_locus_tag=NLI98_01825 NZ_CP100601.1 Protein Homology CDS 396158 398701 . - 0 ID=cds-WP_002920243.1;Parent=gene-NLI98_RS01825;Dbxref=Genbank:WP_002920243.1;Name=WP_002920243.1;Ontology_term=GO:0042128,GO:0008942,GO:0016491,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229204.1;locus_tag=NLI98_RS01825;product=nitrite reductase large subunit NirB;protein_id=WP_002920243.1;transl_table=11 NZ_CP100601.1 RefSeq gene 398940 400262 . + . ID=gene-NLI98_RS01830;Name=NLI98_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01830;old_locus_tag=NLI98_01830 NZ_CP100601.1 Protein Homology CDS 398940 400262 . + 0 ID=cds-WP_004174045.1;Parent=gene-NLI98_RS01830;Dbxref=Genbank:WP_004174045.1;Name=WP_004174045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229202.1;locus_tag=NLI98_RS01830;product=cytosine deaminase;protein_id=WP_004174045.1;transl_table=11 NZ_CP100601.1 RefSeq gene 400259 401446 . - . ID=gene-NLI98_RS01835;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=NLI98_RS01835;old_locus_tag=NLI98_01835 NZ_CP100601.1 Protein Homology CDS 400259 401446 . - 0 ID=cds-WP_002920240.1;Parent=gene-NLI98_RS01835;Dbxref=Genbank:WP_002920240.1;Name=WP_002920240.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229201.1;locus_tag=NLI98_RS01835;product=MFS transporter TsgA;protein_id=WP_002920240.1;transl_table=11 NZ_CP100601.1 RefSeq gene 401723 402292 . + . ID=gene-NLI98_RS01840;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=NLI98_RS01840;old_locus_tag=NLI98_01840 NZ_CP100601.1 Protein Homology CDS 401723 402292 . + 0 ID=cds-WP_002920238.1;Parent=gene-NLI98_RS01840;Dbxref=Genbank:WP_002920238.1;Name=WP_002920238.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229200.1;locus_tag=NLI98_RS01840;product=peptidylprolyl isomerase A;protein_id=WP_002920238.1;transl_table=11 NZ_CP100601.1 RefSeq gene 402399 402566 . + . ID=gene-NLI98_RS01845;Name=NLI98_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01845;old_locus_tag=NLI98_01845 NZ_CP100601.1 Protein Homology CDS 402399 402566 . + 0 ID=cds-WP_002920231.1;Parent=gene-NLI98_RS01845;Dbxref=Genbank:WP_002920231.1;Name=WP_002920231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229199.1;locus_tag=NLI98_RS01845;product=YhfG family protein;protein_id=WP_002920231.1;transl_table=11 NZ_CP100601.1 RefSeq gene 402556 403158 . + . ID=gene-NLI98_RS01850;Name=NLI98_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01850;old_locus_tag=NLI98_01850 NZ_CP100601.1 Protein Homology CDS 402556 403158 . + 0 ID=cds-WP_004181446.1;Parent=gene-NLI98_RS01850;Dbxref=Genbank:WP_004181446.1;Name=WP_004181446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229198.1;locus_tag=NLI98_RS01850;product=putative adenosine monophosphate-protein transferase Fic;protein_id=WP_004181446.1;transl_table=11 NZ_CP100601.1 RefSeq gene 403191 403754 . + . ID=gene-NLI98_RS01855;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=NLI98_RS01855;old_locus_tag=NLI98_01855 NZ_CP100601.1 Protein Homology CDS 403191 403754 . + 0 ID=cds-WP_002920229.1;Parent=gene-NLI98_RS01855;Dbxref=Genbank:WP_002920229.1;Name=WP_002920229.1;gbkey=CDS;gene=pabA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229197.1;locus_tag=NLI98_RS01855;product=aminodeoxychorismate synthase component 2;protein_id=WP_002920229.1;transl_table=11 NZ_CP100601.1 RefSeq gene 403845 405065 . + . ID=gene-NLI98_RS01860;Name=NLI98_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01860;old_locus_tag=NLI98_01860 NZ_CP100601.1 Protein Homology CDS 403845 405065 . + 0 ID=cds-WP_004174049.1;Parent=gene-NLI98_RS01860;Dbxref=Genbank:WP_004174049.1;Name=WP_004174049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229196.1;locus_tag=NLI98_RS01860;product=aspartate aminotransferase family protein;protein_id=WP_004174049.1;transl_table=11 NZ_CP100601.1 RefSeq gene 405055 407133 . - . ID=gene-NLI98_RS01865;Name=NLI98_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01865;old_locus_tag=NLI98_01865 NZ_CP100601.1 Protein Homology CDS 405055 407133 . - 0 ID=cds-WP_004213494.1;Parent=gene-NLI98_RS01865;Dbxref=Genbank:WP_004213494.1;Name=WP_004213494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229195.1;locus_tag=NLI98_RS01865;product=YccS/YhfK family putative transporter;protein_id=WP_004213494.1;transl_table=11 NZ_CP100601.1 RefSeq gene 407185 407817 . - . ID=gene-NLI98_RS01870;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=NLI98_RS01870;old_locus_tag=NLI98_01870 NZ_CP100601.1 Protein Homology CDS 407185 407817 . - 0 ID=cds-WP_000242758.1;Parent=gene-NLI98_RS01870;Dbxref=Genbank:WP_000242758.1;Name=WP_000242758.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=NLI98_RS01870;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_000242758.1;transl_table=11 NZ_CP100601.1 RefSeq gene 408124 408528 . + . ID=gene-NLI98_RS01875;Name=NLI98_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01875;old_locus_tag=NLI98_01875 NZ_CP100601.1 Protein Homology CDS 408124 408528 . + 0 ID=cds-WP_002920158.1;Parent=gene-NLI98_RS01875;Dbxref=Genbank:WP_002920158.1;Name=WP_002920158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002920158.1;locus_tag=NLI98_RS01875;product=OsmC family protein;protein_id=WP_002920158.1;transl_table=11 NZ_CP100601.1 RefSeq gene 408583 409452 . - . ID=gene-NLI98_RS01880;Name=NLI98_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01880;old_locus_tag=NLI98_01880 NZ_CP100601.1 Protein Homology CDS 408583 409452 . - 0 ID=cds-WP_002920153.1;Parent=gene-NLI98_RS01880;Dbxref=Genbank:WP_002920153.1;Name=WP_002920153.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229192.1;locus_tag=NLI98_RS01880;product=phosphoribulokinase;protein_id=WP_002920153.1;transl_table=11 NZ_CP100601.1 RefSeq gene 409489 409707 . - . ID=gene-NLI98_RS01885;Name=NLI98_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01885;old_locus_tag=NLI98_01885 NZ_CP100601.1 Protein Homology CDS 409489 409707 . - 0 ID=cds-WP_004174055.1;Parent=gene-NLI98_RS01885;Dbxref=Genbank:WP_004174055.1;Name=WP_004174055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229191.1;locus_tag=NLI98_RS01885;product=YheU family protein;protein_id=WP_004174055.1;transl_table=11 NZ_CP100601.1 RefSeq gene 409704 410702 . - . ID=gene-NLI98_RS01890;Name=NLI98_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01890;old_locus_tag=NLI98_01890 NZ_CP100601.1 Protein Homology CDS 409704 410702 . - 0 ID=cds-WP_021468514.1;Parent=gene-NLI98_RS01890;Dbxref=Genbank:WP_021468514.1;Name=WP_021468514.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002920149.1;locus_tag=NLI98_RS01890;product=hydrolase;protein_id=WP_021468514.1;transl_table=11 NZ_CP100601.1 RefSeq gene 410930 412834 . - . ID=gene-NLI98_RS01895;Name=NLI98_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01895;old_locus_tag=NLI98_01895 NZ_CP100601.1 Protein Homology CDS 410930 412834 . - 0 ID=cds-WP_004185926.1;Parent=gene-NLI98_RS01895;Dbxref=Genbank:WP_004185926.1;Name=WP_004185926.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229188.1;locus_tag=NLI98_RS01895;product=ABC transporter ATP-binding protein;protein_id=WP_004185926.1;transl_table=11 NZ_CP100601.1 RefSeq gene 413008 413571 . + . ID=gene-NLI98_RS01900;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=NLI98_RS01900;old_locus_tag=NLI98_01900 NZ_CP100601.1 Protein Homology CDS 413008 413571 . + 0 ID=cds-WP_015959085.1;Parent=gene-NLI98_RS01900;Dbxref=Genbank:WP_015959085.1;Name=WP_015959085.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229187.1;locus_tag=NLI98_RS01900;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_015959085.1;transl_table=11 NZ_CP100601.1 RefSeq gene 413558 415363 . + . ID=gene-NLI98_RS01905;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=NLI98_RS01905;old_locus_tag=NLI98_01905 NZ_CP100601.1 Protein Homology CDS 413558 415363 . + 0 ID=cds-WP_004150031.1;Parent=gene-NLI98_RS01905;Dbxref=Genbank:WP_004150031.1;Name=WP_004150031.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455504.1;locus_tag=NLI98_RS01905;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_004150031.1;transl_table=11 NZ_CP100601.1 RefSeq gene 415375 415575 . + . ID=gene-NLI98_RS01910;Name=NLI98_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01910;old_locus_tag=NLI98_01910 NZ_CP100601.1 Protein Homology CDS 415375 415575 . + 0 ID=cds-WP_002920143.1;Parent=gene-NLI98_RS01910;Dbxref=Genbank:WP_002920143.1;Name=WP_002920143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229185.1;locus_tag=NLI98_RS01910;product=YheV family putative metal-binding protein;protein_id=WP_002920143.1;transl_table=11 NZ_CP100601.1 RefSeq gene 415669 416256 . + . ID=gene-NLI98_RS01915;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=NLI98_RS01915;old_locus_tag=NLI98_01915 NZ_CP100601.1 Protein Homology CDS 415669 416256 . + 0 ID=cds-WP_002920140.1;Parent=gene-NLI98_RS01915;Dbxref=Genbank:WP_002920140.1;Name=WP_002920140.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229184.1;locus_tag=NLI98_RS01915;product=peptidylprolyl isomerase;protein_id=WP_002920140.1;transl_table=11 NZ_CP100601.1 RefSeq gene 416315 416533 . - . ID=gene-NLI98_RS01920;Name=NLI98_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01920;old_locus_tag=NLI98_01920 NZ_CP100601.1 Protein Homology CDS 416315 416533 . - 0 ID=cds-WP_002920136.1;Parent=gene-NLI98_RS01920;Dbxref=Genbank:WP_002920136.1;Name=WP_002920136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229183.1;locus_tag=NLI98_RS01920;product=SlyX family protein;protein_id=WP_002920136.1;transl_table=11 NZ_CP100601.1 RefSeq gene 416756 417586 . + . ID=gene-NLI98_RS01925;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=NLI98_RS01925;old_locus_tag=NLI98_01925 NZ_CP100601.1 Protein Homology CDS 416756 417586 . + 0 ID=cds-WP_002920132.1;Parent=gene-NLI98_RS01925;Dbxref=Genbank:WP_002920132.1;Name=WP_002920132.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229182.1;locus_tag=NLI98_RS01925;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_002920132.1;transl_table=11 NZ_CP100601.1 RefSeq gene 417755 418477 . + . ID=gene-NLI98_RS01930;Name=NLI98_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01930;old_locus_tag=NLI98_01930 NZ_CP100601.1 Protein Homology CDS 417755 418477 . + 0 ID=cds-WP_002920130.1;Parent=gene-NLI98_RS01930;Dbxref=Genbank:WP_002920130.1;Name=WP_002920130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229181.1;locus_tag=NLI98_RS01930;product=transcriptional regulator;protein_id=WP_002920130.1;transl_table=11 NZ_CP100601.1 RefSeq gene 418477 418863 . + . ID=gene-NLI98_RS01935;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=NLI98_RS01935;old_locus_tag=NLI98_01935 NZ_CP100601.1 Protein Homology CDS 418477 418863 . + 0 ID=cds-WP_002920128.1;Parent=gene-NLI98_RS01935;Dbxref=Genbank:WP_002920128.1;Name=WP_002920128.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229180.1;locus_tag=NLI98_RS01935;product=sulfurtransferase complex subunit TusD;protein_id=WP_002920128.1;transl_table=11 NZ_CP100601.1 RefSeq gene 418863 419222 . + . ID=gene-NLI98_RS01940;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=NLI98_RS01940;old_locus_tag=NLI98_01940 NZ_CP100601.1 Protein Homology CDS 418863 419222 . + 0 ID=cds-WP_004889490.1;Parent=gene-NLI98_RS01940;Dbxref=Genbank:WP_004889490.1;Name=WP_004889490.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229179.1;locus_tag=NLI98_RS01940;product=sulfurtransferase complex subunit TusC;protein_id=WP_004889490.1;transl_table=11 NZ_CP100601.1 RefSeq gene 419230 419517 . + . ID=gene-NLI98_RS01945;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=NLI98_RS01945;old_locus_tag=NLI98_01945 NZ_CP100601.1 Protein Homology CDS 419230 419517 . + 0 ID=cds-WP_002920119.1;Parent=gene-NLI98_RS01945;Dbxref=Genbank:WP_002920119.1;Name=WP_002920119.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202221.1;locus_tag=NLI98_RS01945;product=sulfurtransferase complex subunit TusB;protein_id=WP_002920119.1;transl_table=11 NZ_CP100601.1 RefSeq gene 419642 420016 . + . ID=gene-NLI98_RS01950;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=NLI98_RS01950;old_locus_tag=NLI98_01950 NZ_CP100601.1 Protein Homology CDS 419642 420016 . + 0 ID=cds-WP_002920115.1;Parent=gene-NLI98_RS01950;Dbxref=Genbank:WP_002920115.1;Name=WP_002920115.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=NLI98_RS01950;product=30S ribosomal protein S12;protein_id=WP_002920115.1;transl_table=11 NZ_CP100601.1 RefSeq gene 420113 420583 . + . ID=gene-NLI98_RS01955;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=NLI98_RS01955;old_locus_tag=NLI98_01955 NZ_CP100601.1 Protein Homology CDS 420113 420583 . + 0 ID=cds-WP_002920113.1;Parent=gene-NLI98_RS01955;Dbxref=Genbank:WP_002920113.1;Name=WP_002920113.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=NLI98_RS01955;product=30S ribosomal protein S7;protein_id=WP_002920113.1;transl_table=11 NZ_CP100601.1 RefSeq gene 420680 422794 . + . ID=gene-NLI98_RS01960;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=NLI98_RS01960;old_locus_tag=NLI98_01960 NZ_CP100601.1 Protein Homology CDS 420680 422794 . + 0 ID=cds-WP_002920103.1;Parent=gene-NLI98_RS01960;Dbxref=Genbank:WP_002920103.1;Name=WP_002920103.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=NLI98_RS01960;product=elongation factor G;protein_id=WP_002920103.1;transl_table=11 NZ_CP100601.1 RefSeq gene 422864 424048 . + . ID=gene-NLI98_RS01965;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=NLI98_RS01965;old_locus_tag=NLI98_01965 NZ_CP100601.1 Protein Homology CDS 422864 424048 . + 0 ID=cds-WP_004174069.1;Parent=gene-NLI98_RS01965;Dbxref=Genbank:WP_004174069.1;Name=WP_004174069.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224494.1;locus_tag=NLI98_RS01965;product=elongation factor Tu;protein_id=WP_004174069.1;transl_table=11 NZ_CP100601.1 RefSeq gene 424229 424423 . + . ID=gene-NLI98_RS01970;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=NLI98_RS01970;old_locus_tag=NLI98_01970 NZ_CP100601.1 Protein Homology CDS 424229 424423 . + 0 ID=cds-WP_004152415.1;Parent=gene-NLI98_RS01970;Dbxref=Genbank:WP_004152415.1;Name=WP_004152415.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229173.1;locus_tag=NLI98_RS01970;product=bacterioferritin-associated ferredoxin;protein_id=WP_004152415.1;transl_table=11 NZ_CP100601.1 RefSeq gene 424497 424973 . + . ID=gene-NLI98_RS01975;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=NLI98_RS01975;old_locus_tag=NLI98_01975 NZ_CP100601.1 Protein Homology CDS 424497 424973 . + 0 ID=cds-WP_002919971.1;Parent=gene-NLI98_RS01975;Dbxref=Genbank:WP_002919971.1;Name=WP_002919971.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229172.1;locus_tag=NLI98_RS01975;product=bacterioferritin;protein_id=WP_002919971.1;transl_table=11 NZ_CP100601.1 RefSeq gene 424957 425442 . - . ID=gene-NLI98_RS01980;Name=NLI98_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS01980;old_locus_tag=NLI98_01980 NZ_CP100601.1 Protein Homology CDS 424957 425442 . - 0 ID=cds-WP_048999954.1;Parent=gene-NLI98_RS01980;Dbxref=Genbank:WP_048999954.1;Name=WP_048999954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229171.1;locus_tag=NLI98_RS01980;product=A24 family peptidase;protein_id=WP_048999954.1;transl_table=11 NZ_CP100601.1 RefSeq gene 425826 426137 . + . ID=gene-NLI98_RS01985;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=NLI98_RS01985;old_locus_tag=NLI98_01985 NZ_CP100601.1 Protein Homology CDS 425826 426137 . + 0 ID=cds-WP_001181005.1;Parent=gene-NLI98_RS01985;Dbxref=Genbank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=NLI98_RS01985;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_CP100601.1 RefSeq gene 426170 426799 . + . ID=gene-NLI98_RS01990;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=NLI98_RS01990;old_locus_tag=NLI98_01990 NZ_CP100601.1 Protein Homology CDS 426170 426799 . + 0 ID=cds-WP_002919796.1;Parent=gene-NLI98_RS01990;Dbxref=Genbank:WP_002919796.1;Name=WP_002919796.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=NLI98_RS01990;product=50S ribosomal protein L3;protein_id=WP_002919796.1;transl_table=11 NZ_CP100601.1 RefSeq gene 426810 427415 . + . ID=gene-NLI98_RS01995;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=NLI98_RS01995;old_locus_tag=NLI98_01995 NZ_CP100601.1 Protein Homology CDS 426810 427415 . + 0 ID=cds-WP_002919794.1;Parent=gene-NLI98_RS01995;Dbxref=Genbank:WP_002919794.1;Name=WP_002919794.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=NLI98_RS01995;product=50S ribosomal protein L4;protein_id=WP_002919794.1;transl_table=11 NZ_CP100601.1 RefSeq gene 427412 427714 . + . ID=gene-NLI98_RS02000;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=NLI98_RS02000;old_locus_tag=NLI98_02000 NZ_CP100601.1 Protein Homology CDS 427412 427714 . + 0 ID=cds-WP_000617546.1;Parent=gene-NLI98_RS02000;Dbxref=Genbank:WP_000617546.1;Name=WP_000617546.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=NLI98_RS02000;product=50S ribosomal protein L23;protein_id=WP_000617546.1;transl_table=11 NZ_CP100601.1 RefSeq gene 427732 428553 . + . ID=gene-NLI98_RS02005;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=NLI98_RS02005;old_locus_tag=NLI98_02005 NZ_CP100601.1 Protein Homology CDS 427732 428553 . + 0 ID=cds-WP_002919786.1;Parent=gene-NLI98_RS02005;Dbxref=Genbank:WP_002919786.1;Name=WP_002919786.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738551.1;locus_tag=NLI98_RS02005;product=50S ribosomal protein L2;protein_id=WP_002919786.1;transl_table=11 NZ_CP100601.1 RefSeq gene 428570 428848 . + . ID=gene-NLI98_RS02010;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=NLI98_RS02010;old_locus_tag=NLI98_02010 NZ_CP100601.1 Protein Homology CDS 428570 428848 . + 0 ID=cds-WP_001138115.1;Parent=gene-NLI98_RS02010;Dbxref=Genbank:WP_001138115.1;Name=WP_001138115.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=NLI98_RS02010;product=30S ribosomal protein S19;protein_id=WP_001138115.1;transl_table=11 NZ_CP100601.1 RefSeq gene 428863 429195 . + . ID=gene-NLI98_RS02015;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=NLI98_RS02015;old_locus_tag=NLI98_02015 NZ_CP100601.1 Protein Homology CDS 428863 429195 . + 0 ID=cds-WP_002919773.1;Parent=gene-NLI98_RS02015;Dbxref=Genbank:WP_002919773.1;Name=WP_002919773.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=NLI98_RS02015;product=50S ribosomal protein L22;protein_id=WP_002919773.1;transl_table=11 NZ_CP100601.1 RefSeq gene 429213 429911 . + . ID=gene-NLI98_RS02020;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=NLI98_RS02020;old_locus_tag=NLI98_02020 NZ_CP100601.1 Protein Homology CDS 429213 429911 . + 0 ID=cds-WP_002919766.1;Parent=gene-NLI98_RS02020;Dbxref=Genbank:WP_002919766.1;Name=WP_002919766.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=NLI98_RS02020;product=30S ribosomal protein S3;protein_id=WP_002919766.1;transl_table=11 NZ_CP100601.1 RefSeq gene 429924 430334 . + . ID=gene-NLI98_RS02025;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=NLI98_RS02025;old_locus_tag=NLI98_02025 NZ_CP100601.1 Protein Homology CDS 429924 430334 . + 0 ID=cds-WP_002919759.1;Parent=gene-NLI98_RS02025;Dbxref=Genbank:WP_002919759.1;Name=WP_002919759.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=NLI98_RS02025;product=50S ribosomal protein L16;protein_id=WP_002919759.1;transl_table=11 NZ_CP100601.1 RefSeq gene 430334 430525 . + . ID=gene-NLI98_RS02030;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=NLI98_RS02030;old_locus_tag=NLI98_02030 NZ_CP100601.1 Protein Homology CDS 430334 430525 . + 0 ID=cds-WP_002919754.1;Parent=gene-NLI98_RS02030;Dbxref=Genbank:WP_002919754.1;Name=WP_002919754.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=NLI98_RS02030;product=50S ribosomal protein L29;protein_id=WP_002919754.1;transl_table=11 NZ_CP100601.1 RefSeq gene 430525 430779 . + . ID=gene-NLI98_RS02035;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=NLI98_RS02035;old_locus_tag=NLI98_02035 NZ_CP100601.1 Protein Homology CDS 430525 430779 . + 0 ID=cds-WP_002919751.1;Parent=gene-NLI98_RS02035;Dbxref=Genbank:WP_002919751.1;Name=WP_002919751.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=NLI98_RS02035;product=30S ribosomal protein S17;protein_id=WP_002919751.1;transl_table=11 NZ_CP100601.1 RefSeq gene 430945 431316 . + . ID=gene-NLI98_RS02040;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=NLI98_RS02040;old_locus_tag=NLI98_02040 NZ_CP100601.1 Protein Homology CDS 430945 431316 . + 0 ID=cds-WP_002919748.1;Parent=gene-NLI98_RS02040;Dbxref=Genbank:WP_002919748.1;Name=WP_002919748.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005501250.1;locus_tag=NLI98_RS02040;product=50S ribosomal protein L14;protein_id=WP_002919748.1;transl_table=11 NZ_CP100601.1 RefSeq gene 431327 431641 . + . ID=gene-NLI98_RS02045;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=NLI98_RS02045;old_locus_tag=NLI98_02045 NZ_CP100601.1 Protein Homology CDS 431327 431641 . + 0 ID=cds-WP_000729185.1;Parent=gene-NLI98_RS02045;Dbxref=Genbank:WP_000729185.1;Name=WP_000729185.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=NLI98_RS02045;product=50S ribosomal protein L24;protein_id=WP_000729185.1;transl_table=11 NZ_CP100601.1 RefSeq gene 431656 432195 . + . ID=gene-NLI98_RS02050;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=NLI98_RS02050;old_locus_tag=NLI98_02050 NZ_CP100601.1 Protein Homology CDS 431656 432195 . + 0 ID=cds-WP_001096200.1;Parent=gene-NLI98_RS02050;Dbxref=Genbank:WP_001096200.1;Name=WP_001096200.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=NLI98_RS02050;product=50S ribosomal protein L5;protein_id=WP_001096200.1;transl_table=11 NZ_CP100601.1 RefSeq gene 432210 432515 . + . ID=gene-NLI98_RS02055;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=NLI98_RS02055;old_locus_tag=NLI98_02055 NZ_CP100601.1 Protein Homology CDS 432210 432515 . + 0 ID=cds-WP_002919667.1;Parent=gene-NLI98_RS02055;Dbxref=Genbank:WP_002919667.1;Name=WP_002919667.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=NLI98_RS02055;product=30S ribosomal protein S14;protein_id=WP_002919667.1;transl_table=11 NZ_CP100601.1 RefSeq gene 432549 432941 . + . ID=gene-NLI98_RS02060;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=NLI98_RS02060;old_locus_tag=NLI98_02060 NZ_CP100601.1 Protein Homology CDS 432549 432941 . + 0 ID=cds-WP_002919665.1;Parent=gene-NLI98_RS02060;Dbxref=Genbank:WP_002919665.1;Name=WP_002919665.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=NLI98_RS02060;product=30S ribosomal protein S8;protein_id=WP_002919665.1;transl_table=11 NZ_CP100601.1 RefSeq gene 432954 433487 . + . ID=gene-NLI98_RS02065;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=NLI98_RS02065;old_locus_tag=NLI98_02065 NZ_CP100601.1 Protein Homology CDS 432954 433487 . + 0 ID=cds-WP_002919662.1;Parent=gene-NLI98_RS02065;Dbxref=Genbank:WP_002919662.1;Name=WP_002919662.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=NLI98_RS02065;product=50S ribosomal protein L6;protein_id=WP_002919662.1;transl_table=11 NZ_CP100601.1 RefSeq gene 433497 433850 . + . ID=gene-NLI98_RS02070;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=NLI98_RS02070;old_locus_tag=NLI98_02070 NZ_CP100601.1 Protein Homology CDS 433497 433850 . + 0 ID=cds-WP_000358960.1;Parent=gene-NLI98_RS02070;Dbxref=Genbank:WP_000358960.1;Name=WP_000358960.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=NLI98_RS02070;product=50S ribosomal protein L18;protein_id=WP_000358960.1;transl_table=11 NZ_CP100601.1 RefSeq gene 433865 434368 . + . ID=gene-NLI98_RS02075;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=NLI98_RS02075;old_locus_tag=NLI98_02075 NZ_CP100601.1 Protein Homology CDS 433865 434368 . + 0 ID=cds-WP_002919545.1;Parent=gene-NLI98_RS02075;Dbxref=Genbank:WP_002919545.1;Name=WP_002919545.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004106339.1;locus_tag=NLI98_RS02075;product=30S ribosomal protein S5;protein_id=WP_002919545.1;transl_table=11 NZ_CP100601.1 RefSeq gene 434372 434551 . + . ID=gene-NLI98_RS02080;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=NLI98_RS02080;old_locus_tag=NLI98_02080 NZ_CP100601.1 Protein Homology CDS 434372 434551 . + 0 ID=cds-WP_001140434.1;Parent=gene-NLI98_RS02080;Dbxref=Genbank:WP_001140434.1;Name=WP_001140434.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=NLI98_RS02080;product=50S ribosomal protein L30;protein_id=WP_001140434.1;transl_table=11 NZ_CP100601.1 RefSeq gene 434555 434989 . + . ID=gene-NLI98_RS02085;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=NLI98_RS02085;old_locus_tag=NLI98_02085 NZ_CP100601.1 Protein Homology CDS 434555 434989 . + 0 ID=cds-WP_002919516.1;Parent=gene-NLI98_RS02085;Dbxref=Genbank:WP_002919516.1;Name=WP_002919516.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=NLI98_RS02085;product=50S ribosomal protein L15;protein_id=WP_002919516.1;transl_table=11 NZ_CP100601.1 RefSeq gene 434997 436328 . + . ID=gene-NLI98_RS02090;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=NLI98_RS02090;old_locus_tag=NLI98_02090 NZ_CP100601.1 Protein Homology CDS 434997 436328 . + 0 ID=cds-WP_002919515.1;Parent=gene-NLI98_RS02090;Dbxref=Genbank:WP_002919515.1;Name=WP_002919515.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868351.1;locus_tag=NLI98_RS02090;product=preprotein translocase subunit SecY;protein_id=WP_002919515.1;transl_table=11 NZ_CP100601.1 RefSeq gene 436362 436478 . + . ID=gene-NLI98_RS02095;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=NLI98_RS02095;old_locus_tag=NLI98_02095 NZ_CP100601.1 Protein Homology CDS 436362 436478 . + 0 ID=cds-WP_000868187.1;Parent=gene-NLI98_RS02095;Dbxref=Genbank:WP_000868187.1;Name=WP_000868187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=NLI98_RS02095;product=50S ribosomal protein L36;protein_id=WP_000868187.1;transl_table=11 NZ_CP100601.1 RefSeq gene 436625 436981 . + . ID=gene-NLI98_RS02100;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=NLI98_RS02100;old_locus_tag=NLI98_02100 NZ_CP100601.1 Protein Homology CDS 436625 436981 . + 0 ID=cds-WP_002919259.1;Parent=gene-NLI98_RS02100;Dbxref=Genbank:WP_002919259.1;Name=WP_002919259.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=NLI98_RS02100;product=30S ribosomal protein S13;protein_id=WP_002919259.1;transl_table=11 NZ_CP100601.1 RefSeq gene 436998 437387 . + . ID=gene-NLI98_RS02105;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=NLI98_RS02105;old_locus_tag=NLI98_02105 NZ_CP100601.1 Protein Homology CDS 436998 437387 . + 0 ID=cds-WP_002919257.1;Parent=gene-NLI98_RS02105;Dbxref=Genbank:WP_002919257.1;Name=WP_002919257.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=NLI98_RS02105;product=30S ribosomal protein S11;protein_id=WP_002919257.1;transl_table=11 NZ_CP100601.1 RefSeq gene 437421 438041 . + . ID=gene-NLI98_RS02110;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=NLI98_RS02110;old_locus_tag=NLI98_02110 NZ_CP100601.1 Protein Homology CDS 437421 438041 . + 0 ID=cds-WP_002919224.1;Parent=gene-NLI98_RS02110;Dbxref=Genbank:WP_002919224.1;Name=WP_002919224.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=NLI98_RS02110;product=30S ribosomal protein S4;protein_id=WP_002919224.1;transl_table=11 NZ_CP100601.1 RefSeq gene 438067 439056 . + . ID=gene-NLI98_RS02115;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=NLI98_RS02115;old_locus_tag=NLI98_02115 NZ_CP100601.1 Protein Homology CDS 438067 439056 . + 0 ID=cds-WP_002919219.1;Parent=gene-NLI98_RS02115;Dbxref=Genbank:WP_002919219.1;Name=WP_002919219.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=NLI98_RS02115;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_002919219.1;transl_table=11 NZ_CP100601.1 RefSeq gene 439097 439483 . + . ID=gene-NLI98_RS02120;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=NLI98_RS02120;old_locus_tag=NLI98_02120 NZ_CP100601.1 Protein Homology CDS 439097 439483 . + 0 ID=cds-WP_002919206.1;Parent=gene-NLI98_RS02120;Dbxref=Genbank:WP_002919206.1;Name=WP_002919206.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229143.1;locus_tag=NLI98_RS02120;product=50S ribosomal protein L17;protein_id=WP_002919206.1;transl_table=11 NZ_CP100601.1 RefSeq gene 439592 439960 . + . ID=gene-NLI98_RS02125;Name=NLI98_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02125;old_locus_tag=NLI98_02125 NZ_CP100601.1 Protein Homology CDS 439592 439960 . + 0 ID=cds-WP_002919204.1;Parent=gene-NLI98_RS02125;Dbxref=Genbank:WP_002919204.1;Name=WP_002919204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229142.1;locus_tag=NLI98_RS02125;product=DUF1992 domain-containing protein;protein_id=WP_002919204.1;transl_table=11 NZ_CP100601.1 RefSeq gene 439963 440388 . + . ID=gene-NLI98_RS02130;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=NLI98_RS02130;old_locus_tag=NLI98_02130 NZ_CP100601.1 Protein Homology CDS 439963 440388 . + 0 ID=cds-WP_004185894.1;Parent=gene-NLI98_RS02130;Dbxref=Genbank:WP_004185894.1;Name=WP_004185894.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229141.1;locus_tag=NLI98_RS02130;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_004185894.1;transl_table=11 NZ_CP100601.1 RefSeq gene 440446 440724 . + . ID=gene-NLI98_RS02135;Name=NLI98_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02135;old_locus_tag=NLI98_02135 NZ_CP100601.1 Protein Homology CDS 440446 440724 . + 0 ID=cds-WP_004188380.1;Parent=gene-NLI98_RS02135;Dbxref=Genbank:WP_004188380.1;Name=WP_004188380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145324.1;locus_tag=NLI98_RS02135;product=alternative ribosome-rescue factor A;protein_id=WP_004188380.1;transl_table=11 NZ_CP100601.1 RefSeq gene 440660 441073 . - . ID=gene-NLI98_RS02140;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=NLI98_RS02140;old_locus_tag=NLI98_02140 NZ_CP100601.1 Protein Homology CDS 440660 441073 . - 0 ID=cds-WP_004145325.1;Parent=gene-NLI98_RS02140;Dbxref=Genbank:WP_004145325.1;Name=WP_004145325.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229140.1;locus_tag=NLI98_RS02140;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_004145325.1;transl_table=11 NZ_CP100601.1 RefSeq gene 441214 442590 . - . ID=gene-NLI98_RS02145;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=NLI98_RS02145;old_locus_tag=NLI98_02145 NZ_CP100601.1 Protein Homology CDS 441214 442590 . - 0 ID=cds-WP_002919153.1;Parent=gene-NLI98_RS02145;Dbxref=Genbank:WP_002919153.1;Name=WP_002919153.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=NLI98_RS02145;product=Trk system potassium transporter TrkA;protein_id=WP_002919153.1;transl_table=11 NZ_CP100601.1 RefSeq gene 442604 443899 . - . ID=gene-NLI98_RS02150;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=NLI98_RS02150;old_locus_tag=NLI98_02150 NZ_CP100601.1 Protein Homology CDS 442604 443899 . - 0 ID=cds-WP_040236266.1;Parent=gene-NLI98_RS02150;Dbxref=Genbank:WP_040236266.1;Name=WP_040236266.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229138.1;locus_tag=NLI98_RS02150;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_040236266.1;transl_table=11 NZ_CP100601.1 RefSeq gene 443952 444899 . - . ID=gene-NLI98_RS02155;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=NLI98_RS02155;old_locus_tag=NLI98_02155 NZ_CP100601.1 Protein Homology CDS 443952 444899 . - 0 ID=cds-WP_004150007.1;Parent=gene-NLI98_RS02155;Dbxref=Genbank:WP_004150007.1;Name=WP_004150007.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229137.1;locus_tag=NLI98_RS02155;product=methionyl-tRNA formyltransferase;protein_id=WP_004150007.1;transl_table=11 NZ_CP100601.1 RefSeq gene 444914 445423 . - . ID=gene-NLI98_RS02160;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=NLI98_RS02160;old_locus_tag=NLI98_02160 NZ_CP100601.1 Protein Homology CDS 444914 445423 . - 0 ID=cds-WP_004174081.1;Parent=gene-NLI98_RS02160;Dbxref=Genbank:WP_004174081.1;Name=WP_004174081.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229136.1;locus_tag=NLI98_RS02160;product=peptide deformylase;protein_id=WP_004174081.1;transl_table=11 NZ_CP100601.1 RefSeq gene 445552 446676 . + . ID=gene-NLI98_RS02165;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=NLI98_RS02165;old_locus_tag=NLI98_02165 NZ_CP100601.1 Protein Homology CDS 445552 446676 . + 0 ID=cds-WP_002919139.1;Parent=gene-NLI98_RS02165;Dbxref=Genbank:WP_002919139.1;Name=WP_002919139.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229135.1;locus_tag=NLI98_RS02165;product=DNA-protecting protein DprA;protein_id=WP_002919139.1;transl_table=11 NZ_CP100601.1 RefSeq gene 446648 447121 . + . ID=gene-NLI98_RS02170;Name=smg;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=NLI98_RS02170;old_locus_tag=NLI98_02170 NZ_CP100601.1 Protein Homology CDS 446648 447121 . + 0 ID=cds-WP_002919137.1;Parent=gene-NLI98_RS02170;Dbxref=Genbank:WP_002919137.1;Name=WP_002919137.1;gbkey=CDS;gene=smg;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134083.1;locus_tag=NLI98_RS02170;product=DUF494 family protein Smg;protein_id=WP_002919137.1;transl_table=11 NZ_CP100601.1 RefSeq gene 447148 447690 . + . ID=gene-NLI98_RS02175;Name=NLI98_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02175;old_locus_tag=NLI98_02175 NZ_CP100601.1 Protein Homology CDS 447148 447690 . + 0 ID=cds-WP_004145330.1;Parent=gene-NLI98_RS02175;Dbxref=Genbank:WP_004145330.1;Name=WP_004145330.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229133.1;locus_tag=NLI98_RS02175;product=topoisomerase DNA-binding C4 zinc finger domain-containing protein;protein_id=WP_004145330.1;transl_table=11 NZ_CP100601.1 RefSeq gene 447695 448267 . + . ID=gene-NLI98_RS02180;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=NLI98_RS02180;old_locus_tag=NLI98_02180 NZ_CP100601.1 Protein Homology CDS 447695 448267 . + 0 ID=cds-WP_002919132.1;Parent=gene-NLI98_RS02180;Dbxref=Genbank:WP_002919132.1;Name=WP_002919132.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229132.1;locus_tag=NLI98_RS02180;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_002919132.1;transl_table=11 NZ_CP100601.1 RefSeq gene 448271 449089 . + . ID=gene-NLI98_RS02185;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=NLI98_RS02185;old_locus_tag=NLI98_02185 NZ_CP100601.1 Protein Homology CDS 448271 449089 . + 0 ID=cds-WP_002919126.1;Parent=gene-NLI98_RS02185;Dbxref=Genbank:WP_002919126.1;Name=WP_002919126.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229131.1;locus_tag=NLI98_RS02185;product=shikimate dehydrogenase;protein_id=WP_002919126.1;transl_table=11 NZ_CP100601.1 RefSeq gene 449086 449343 . + . ID=gene-NLI98_RS02190;Name=NLI98_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02190;old_locus_tag=NLI98_02190 NZ_CP100601.1 Protein Homology CDS 449086 449343 . + 0 ID=cds-WP_002919125.1;Parent=gene-NLI98_RS02190;Dbxref=Genbank:WP_002919125.1;Name=WP_002919125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229130.1;locus_tag=NLI98_RS02190;product=DUF1488 domain-containing protein;protein_id=WP_002919125.1;transl_table=11 NZ_CP100601.1 RefSeq gene 449319 449873 . - . ID=gene-NLI98_RS02195;Name=NLI98_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02195;old_locus_tag=NLI98_02195 NZ_CP100601.1 Protein Homology CDS 449319 449873 . - 0 ID=cds-WP_002919123.1;Parent=gene-NLI98_RS02195;Dbxref=Genbank:WP_002919123.1;Name=WP_002919123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012967157.1;locus_tag=NLI98_RS02195;product=gamma carbonic anhydrase family protein;protein_id=WP_002919123.1;transl_table=11 NZ_CP100601.1 RefSeq gene 450344 451883 . + . ID=gene-NLI98_RS02200;Name=NLI98_RS02200;gbkey=Gene;gene_biotype=rRNA;locus_tag=NLI98_RS02200;old_locus_tag=NLI98_02200 NZ_CP100601.1 cmsearch rRNA 450344 451883 . + . ID=rna-NLI98_RS02200;Parent=gene-NLI98_RS02200;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS02200;product=16S ribosomal RNA NZ_CP100601.1 cmsearch exon 450344 451883 . + . ID=exon-NLI98_RS02200-1;Parent=rna-NLI98_RS02200;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS02200;product=16S ribosomal RNA NZ_CP100601.1 RefSeq gene 452082 454983 . + . ID=gene-NLI98_RS02205;Name=NLI98_RS02205;gbkey=Gene;gene_biotype=rRNA;locus_tag=NLI98_RS02205;old_locus_tag=NLI98_02205 NZ_CP100601.1 cmsearch rRNA 452082 454983 . + . ID=rna-NLI98_RS02205;Parent=gene-NLI98_RS02205;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS02205;product=23S ribosomal RNA NZ_CP100601.1 cmsearch exon 452082 454983 . + . ID=exon-NLI98_RS02205-1;Parent=rna-NLI98_RS02205;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS02205;product=23S ribosomal RNA NZ_CP100601.1 RefSeq gene 455179 455294 . + . ID=gene-NLI98_RS02210;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NLI98_RS02210;old_locus_tag=NLI98_02210 NZ_CP100601.1 cmsearch rRNA 455179 455294 . + . ID=rna-NLI98_RS02210;Parent=gene-NLI98_RS02210;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS02210;product=5S ribosomal RNA NZ_CP100601.1 cmsearch exon 455179 455294 . + . ID=exon-NLI98_RS02210-1;Parent=rna-NLI98_RS02210;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS02210;product=5S ribosomal RNA NZ_CP100601.1 RefSeq gene 455309 455384 . + . ID=gene-NLI98_RS02215;Name=NLI98_RS02215;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS02215;old_locus_tag=NLI98_02215 NZ_CP100601.1 tRNAscan-SE tRNA 455309 455384 . + . ID=rna-NLI98_RS02215;Parent=gene-NLI98_RS02215;anticodon=(pos:455342..455344);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS02215;product=tRNA-Thr NZ_CP100601.1 tRNAscan-SE exon 455309 455384 . + . ID=exon-NLI98_RS02215-1;Parent=rna-NLI98_RS02215;anticodon=(pos:455342..455344);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS02215;product=tRNA-Thr NZ_CP100601.1 RefSeq gene 455423 455538 . + . ID=gene-NLI98_RS02220;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NLI98_RS02220;old_locus_tag=NLI98_02220 NZ_CP100601.1 cmsearch rRNA 455423 455538 . + . ID=rna-NLI98_RS02220;Parent=gene-NLI98_RS02220;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS02220;product=5S ribosomal RNA NZ_CP100601.1 cmsearch exon 455423 455538 . + . ID=exon-NLI98_RS02220-1;Parent=rna-NLI98_RS02220;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS02220;product=5S ribosomal RNA NZ_CP100601.1 RefSeq gene 455947 456168 . - . ID=gene-NLI98_RS02225;Name=NLI98_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02225;old_locus_tag=NLI98_02225 NZ_CP100601.1 Protein Homology CDS 455947 456168 . - 0 ID=cds-WP_002919103.1;Parent=gene-NLI98_RS02225;Dbxref=Genbank:WP_002919103.1;Name=WP_002919103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229128.1;locus_tag=NLI98_RS02225;product=membrane protein;protein_id=WP_002919103.1;transl_table=11 NZ_CP100601.1 RefSeq gene 456461 459571 . - . ID=gene-NLI98_RS02230;Name=NLI98_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02230;old_locus_tag=NLI98_02230 NZ_CP100601.1 Protein Homology CDS 456461 459571 . - 0 ID=cds-WP_004174089.1;Parent=gene-NLI98_RS02230;Dbxref=Genbank:WP_004174089.1;Name=WP_004174089.1;Ontology_term=GO:0006810,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229127.1;locus_tag=NLI98_RS02230;product=efflux RND transporter permease subunit;protein_id=WP_004174089.1;transl_table=11 NZ_CP100601.1 RefSeq gene 459584 460723 . - . ID=gene-NLI98_RS02235;Name=NLI98_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02235;old_locus_tag=NLI98_02235 NZ_CP100601.1 Protein Homology CDS 459584 460723 . - 0 ID=cds-WP_004181436.1;Parent=gene-NLI98_RS02235;Dbxref=Genbank:WP_004181436.1;Name=WP_004181436.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229126.1;locus_tag=NLI98_RS02235;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_004181436.1;transl_table=11 NZ_CP100601.1 RefSeq gene 461102 461752 . + . ID=gene-NLI98_RS02240;Name=envR;gbkey=Gene;gene=envR;gene_biotype=protein_coding;locus_tag=NLI98_RS02240;old_locus_tag=NLI98_02240 NZ_CP100601.1 Protein Homology CDS 461102 461752 . + 0 ID=cds-WP_004150972.1;Parent=gene-NLI98_RS02240;Dbxref=Genbank:WP_004150972.1;Name=WP_004150972.1;gbkey=CDS;gene=envR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229125.1;locus_tag=NLI98_RS02240;product=acrEF/envCD operon transcriptional regulator;protein_id=WP_004150972.1;transl_table=11 NZ_CP100601.1 RefSeq gene 461840 462136 . - . ID=gene-NLI98_RS02245;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=NLI98_RS02245;old_locus_tag=NLI98_02245 NZ_CP100601.1 Protein Homology CDS 461840 462136 . - 0 ID=cds-WP_000462905.1;Parent=gene-NLI98_RS02245;Dbxref=Genbank:WP_000462905.1;Name=WP_000462905.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=NLI98_RS02245;product=DNA-binding transcriptional regulator Fis;protein_id=WP_000462905.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 462118 463126 . - . ID=gene-NLI98_RS02250;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=pseudogene;locus_tag=NLI98_RS02250;old_locus_tag=NLI98_02250;pseudo=true NZ_CP100601.1 Protein Homology CDS 462118 463126 . - 0 ID=cds-NLI98_RS02250;Parent=gene-NLI98_RS02250;Note=frameshifted;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936856.1;locus_tag=NLI98_RS02250;product=tRNA dihydrouridine synthase DusB;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 463484 464365 . - . ID=gene-NLI98_RS02255;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=NLI98_RS02255;old_locus_tag=NLI98_02255 NZ_CP100601.1 Protein Homology CDS 463484 464365 . - 0 ID=cds-WP_004144971.1;Parent=gene-NLI98_RS02255;Dbxref=Genbank:WP_004144971.1;Name=WP_004144971.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229100.1;locus_tag=NLI98_RS02255;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_004144971.1;transl_table=11 NZ_CP100601.1 RefSeq gene 464377 465828 . - . ID=gene-NLI98_RS02260;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=NLI98_RS02260;old_locus_tag=NLI98_02260 NZ_CP100601.1 Protein Homology CDS 464377 465828 . - 0 ID=cds-WP_004188394.1;Parent=gene-NLI98_RS02260;Dbxref=Genbank:WP_004188394.1;Name=WP_004188394.1;Ontology_term=GO:0015887,GO:0015937,GO:0015498;gbkey=CDS;gene=panF;go_function=pantothenate:sodium symporter activity|0015498||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229099.1;locus_tag=NLI98_RS02260;product=sodium/pantothenate symporter;protein_id=WP_004188394.1;transl_table=11 NZ_CP100601.1 RefSeq gene 465818 466060 . - . ID=gene-NLI98_RS02265;Name=NLI98_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02265;old_locus_tag=NLI98_02265 NZ_CP100601.1 Protein Homology CDS 465818 466060 . - 0 ID=cds-WP_002918740.1;Parent=gene-NLI98_RS02265;Dbxref=Genbank:WP_002918740.1;Name=WP_002918740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229098.1;locus_tag=NLI98_RS02265;product=YhdT family protein;protein_id=WP_002918740.1;transl_table=11 NZ_CP100601.1 RefSeq gene 466171 467520 . - . ID=gene-NLI98_RS02270;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=NLI98_RS02270;old_locus_tag=NLI98_02270 NZ_CP100601.1 Protein Homology CDS 466171 467520 . - 0 ID=cds-WP_002918738.1;Parent=gene-NLI98_RS02270;Dbxref=Genbank:WP_002918738.1;Name=WP_002918738.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009483995.1;locus_tag=NLI98_RS02270;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_002918738.1;transl_table=11 NZ_CP100601.1 RefSeq gene 467531 467998 . - . ID=gene-NLI98_RS02275;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=NLI98_RS02275;old_locus_tag=NLI98_02275 NZ_CP100601.1 Protein Homology CDS 467531 467998 . - 0 ID=cds-WP_002918736.1;Parent=gene-NLI98_RS02275;Dbxref=Genbank:WP_002918736.1;Name=WP_002918736.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229096.1;locus_tag=NLI98_RS02275;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_002918736.1;transl_table=11 NZ_CP100601.1 RefSeq gene 468021 468473 . - . ID=gene-NLI98_RS02280;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=NLI98_RS02280;old_locus_tag=NLI98_02280 NZ_CP100601.1 Protein Homology CDS 468021 468473 . - 0 ID=cds-WP_088498257.1;Parent=gene-NLI98_RS02280;Dbxref=Genbank:WP_088498257.1;Name=WP_088498257.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229095.1;locus_tag=NLI98_RS02280;product=type II 3-dehydroquinate dehydratase;protein_id=WP_088498257.1;transl_table=11 NZ_CP100601.1 RefSeq gene 468697 469305 . - . ID=gene-NLI98_RS02285;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=NLI98_RS02285;old_locus_tag=NLI98_02285 NZ_CP100601.1 Protein Homology CDS 468697 469305 . - 0 ID=cds-WP_004185869.1;Parent=gene-NLI98_RS02285;Dbxref=Genbank:WP_004185869.1;Name=WP_004185869.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229094.1;locus_tag=NLI98_RS02285;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_004185869.1;transl_table=11 NZ_CP100601.1 RefSeq gene 469305 470306 . - . ID=gene-NLI98_RS02290;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=NLI98_RS02290;old_locus_tag=NLI98_02290 NZ_CP100601.1 Protein Homology CDS 469305 470306 . - 0 ID=cds-WP_088498258.1;Parent=gene-NLI98_RS02290;Dbxref=Genbank:WP_088498258.1;Name=WP_088498258.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229093.1;locus_tag=NLI98_RS02290;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_088498258.1;transl_table=11 NZ_CP100601.1 RefSeq gene 470537 470728 . + . ID=gene-NLI98_RS02295;Name=NLI98_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02295;old_locus_tag=NLI98_02295 NZ_CP100601.1 Protein Homology CDS 470537 470728 . + 0 ID=cds-WP_032422271.1;Parent=gene-NLI98_RS02295;Dbxref=Genbank:WP_032422271.1;Name=WP_032422271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229092.1;locus_tag=NLI98_RS02295;product=hypothetical protein;protein_id=WP_032422271.1;transl_table=11 NZ_CP100601.1 RefSeq gene 470808 472748 . + . ID=gene-NLI98_RS02300;Name=csrD;gbkey=Gene;gene=csrD;gene_biotype=protein_coding;locus_tag=NLI98_RS02300;old_locus_tag=NLI98_02300 NZ_CP100601.1 Protein Homology CDS 470808 472748 . + 0 ID=cds-WP_009309618.1;Parent=gene-NLI98_RS02300;Dbxref=Genbank:WP_009309618.1;Name=WP_009309618.1;gbkey=CDS;gene=csrD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229091.1;locus_tag=NLI98_RS02300;product=RNase E specificity factor CsrD;protein_id=WP_009309618.1;transl_table=11 NZ_CP100601.1 RefSeq gene 473054 474097 . + . ID=gene-NLI98_RS02305;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=NLI98_RS02305;old_locus_tag=NLI98_02305 NZ_CP100601.1 Protein Homology CDS 473054 474097 . + 0 ID=cds-WP_002918653.1;Parent=gene-NLI98_RS02305;Dbxref=Genbank:WP_002918653.1;Name=WP_002918653.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=NLI98_RS02305;product=rod shape-determining protein MreB;protein_id=WP_002918653.1;transl_table=11 NZ_CP100601.1 RefSeq gene 474168 475160 . + . ID=gene-NLI98_RS02310;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=NLI98_RS02310;old_locus_tag=NLI98_02310 NZ_CP100601.1 Protein Homology CDS 474168 475160 . + 0 ID=cds-WP_004149974.1;Parent=gene-NLI98_RS02310;Dbxref=Genbank:WP_004149974.1;Name=WP_004149974.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229089.1;locus_tag=NLI98_RS02310;product=rod shape-determining protein MreC;protein_id=WP_004149974.1;transl_table=11 NZ_CP100601.1 RefSeq gene 475160 475648 . + . ID=gene-NLI98_RS02315;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=NLI98_RS02315;old_locus_tag=NLI98_02315 NZ_CP100601.1 Protein Homology CDS 475160 475648 . + 0 ID=cds-WP_002918648.1;Parent=gene-NLI98_RS02315;Dbxref=Genbank:WP_002918648.1;Name=WP_002918648.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001487551.1;locus_tag=NLI98_RS02315;product=rod shape-determining protein MreD;protein_id=WP_002918648.1;transl_table=11 NZ_CP100601.1 RefSeq gene 475656 476237 . + . ID=gene-NLI98_RS02320;Name=NLI98_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02320;old_locus_tag=NLI98_02320 NZ_CP100601.1 Protein Homology CDS 475656 476237 . + 0 ID=cds-WP_002918646.1;Parent=gene-NLI98_RS02320;Dbxref=Genbank:WP_002918646.1;Name=WP_002918646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229087.1;locus_tag=NLI98_RS02320;product=Maf-like protein;protein_id=WP_002918646.1;transl_table=11 NZ_CP100601.1 RefSeq gene 476240 477709 . + . ID=gene-NLI98_RS02325;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=NLI98_RS02325;old_locus_tag=NLI98_02325 NZ_CP100601.1 Protein Homology CDS 476240 477709 . + 0 ID=cds-WP_002918644.1;Parent=gene-NLI98_RS02325;Dbxref=Genbank:WP_002918644.1;Name=WP_002918644.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,ribonuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818051.1;locus_tag=NLI98_RS02325;product=ribonuclease G;protein_id=WP_002918644.1;transl_table=11 NZ_CP100601.1 RefSeq gene 477747 481544 . + . ID=gene-NLI98_RS02330;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=NLI98_RS02330;old_locus_tag=NLI98_02330 NZ_CP100601.1 Protein Homology CDS 477747 481544 . + 0 ID=cds-WP_004181431.1;Parent=gene-NLI98_RS02330;Dbxref=Genbank:WP_004181431.1;Name=WP_004181431.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229085.1;locus_tag=NLI98_RS02330;product=AsmA2 domain-containing protein YhdP;protein_id=WP_004181431.1;transl_table=11 NZ_CP100601.1 RefSeq gene 481633 483078 . + . ID=gene-NLI98_RS02335;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=NLI98_RS02335;old_locus_tag=NLI98_02335 NZ_CP100601.1 Protein Homology CDS 481633 483078 . + 0 ID=cds-WP_004144958.1;Parent=gene-NLI98_RS02335;Dbxref=Genbank:WP_004144958.1;Name=WP_004144958.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=NLI98_RS02335;product=metalloprotease TldD;protein_id=WP_004144958.1;transl_table=11 NZ_CP100601.1 RefSeq gene 483114 484043 . - . ID=gene-NLI98_RS02340;Name=aaeR;gbkey=Gene;gene=aaeR;gene_biotype=protein_coding;locus_tag=NLI98_RS02340;old_locus_tag=NLI98_02340 NZ_CP100601.1 Protein Homology CDS 483114 484043 . - 0 ID=cds-WP_002918641.1;Parent=gene-NLI98_RS02340;Dbxref=Genbank:WP_002918641.1;Name=WP_002918641.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=aaeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462277.1;locus_tag=NLI98_RS02340;product=HTH-type transcriptional activator AaeR;protein_id=WP_002918641.1;transl_table=11 NZ_CP100601.1 RefSeq gene 484175 484378 . + . ID=gene-NLI98_RS02345;Name=aaeX;gbkey=Gene;gene=aaeX;gene_biotype=protein_coding;locus_tag=NLI98_RS02345;old_locus_tag=NLI98_02345 NZ_CP100601.1 Protein Homology CDS 484175 484378 . + 0 ID=cds-WP_002918640.1;Parent=gene-NLI98_RS02345;Dbxref=Genbank:WP_002918640.1;Name=WP_002918640.1;gbkey=CDS;gene=aaeX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000051842.1;locus_tag=NLI98_RS02345;product=p-hydroxybenzoic acid efflux pump operon protein AaeX;protein_id=WP_002918640.1;transl_table=11 NZ_CP100601.1 RefSeq gene 484386 485318 . + . ID=gene-NLI98_RS02350;Name=aaeA;gbkey=Gene;gene=aaeA;gene_biotype=protein_coding;locus_tag=NLI98_RS02350;old_locus_tag=NLI98_02350 NZ_CP100601.1 Protein Homology CDS 484386 485318 . + 0 ID=cds-WP_002918639.1;Parent=gene-NLI98_RS02350;Dbxref=Genbank:WP_002918639.1;Name=WP_002918639.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229081.1;locus_tag=NLI98_RS02350;product=p-hydroxybenzoic acid efflux pump subunit AaeA;protein_id=WP_002918639.1;transl_table=11 NZ_CP100601.1 RefSeq gene 485324 487291 . + . ID=gene-NLI98_RS02355;Name=aaeB;gbkey=Gene;gene=aaeB;gene_biotype=protein_coding;locus_tag=NLI98_RS02355;old_locus_tag=NLI98_02355 NZ_CP100601.1 Protein Homology CDS 485324 487291 . + 0 ID=cds-WP_002918632.1;Parent=gene-NLI98_RS02355;Dbxref=Genbank:WP_002918632.1;Name=WP_002918632.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=aaeB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540451.1;locus_tag=NLI98_RS02355;product=p-hydroxybenzoic acid efflux pump subunit AaeB;protein_id=WP_002918632.1;transl_table=11 NZ_CP100601.1 RefSeq gene 487371 487646 . + . ID=gene-NLI98_RS02360;Name=NLI98_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02360;old_locus_tag=NLI98_02360 NZ_CP100601.1 Protein Homology CDS 487371 487646 . + 0 ID=cds-WP_002918629.1;Parent=gene-NLI98_RS02360;Dbxref=Genbank:WP_002918629.1;Name=WP_002918629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229079.1;locus_tag=NLI98_RS02360;product=barstar family protein;protein_id=WP_002918629.1;transl_table=11 NZ_CP100601.1 RefSeq gene 487697 487963 . - . ID=gene-NLI98_RS02365;Name=yhcN-B;gbkey=Gene;gene=yhcN-B;gene_biotype=protein_coding;locus_tag=NLI98_RS02365;old_locus_tag=NLI98_02365 NZ_CP100601.1 Protein Homology CDS 487697 487963 . - 0 ID=cds-WP_002918627.1;Parent=gene-NLI98_RS02365;Dbxref=Genbank:WP_002918627.1;Name=WP_002918627.1;gbkey=CDS;gene=yhcN-B;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462272.1;locus_tag=NLI98_RS02365;product=DUF1471 family stress response protein YhcN-B;protein_id=WP_002918627.1;transl_table=11 NZ_CP100601.1 RefSeq gene 488062 488325 . - . ID=gene-NLI98_RS02370;Name=yhcN;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=NLI98_RS02370;old_locus_tag=NLI98_02370 NZ_CP100601.1 Protein Homology CDS 488062 488325 . - 0 ID=cds-WP_004889568.1;Parent=gene-NLI98_RS02370;Dbxref=Genbank:WP_004889568.1;Name=WP_004889568.1;gbkey=CDS;gene=yhcN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229077.1;locus_tag=NLI98_RS02370;product=peroxide/acid stress response protein YhcN;protein_id=WP_004889568.1;transl_table=11 NZ_CP100601.1 RefSeq gene 488701 489171 . - . ID=gene-NLI98_RS02375;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=NLI98_RS02375;old_locus_tag=NLI98_02375 NZ_CP100601.1 Protein Homology CDS 488701 489171 . - 0 ID=cds-WP_002918625.1;Parent=gene-NLI98_RS02375;Dbxref=Genbank:WP_002918625.1;Name=WP_002918625.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210173.1;locus_tag=NLI98_RS02375;product=transcriptional regulator ArgR;protein_id=WP_002918625.1;transl_table=11 NZ_CP100601.1 RefSeq gene 489586 490524 . + . ID=gene-NLI98_RS02380;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=NLI98_RS02380;old_locus_tag=NLI98_02380 NZ_CP100601.1 Protein Homology CDS 489586 490524 . + 0 ID=cds-WP_002918570.1;Parent=gene-NLI98_RS02380;Dbxref=Genbank:WP_002918570.1;Name=WP_002918570.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=NLI98_RS02380;product=malate dehydrogenase;protein_id=WP_002918570.1;transl_table=11 NZ_CP100601.1 RefSeq gene 490661 491719 . - . ID=gene-NLI98_RS02385;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=NLI98_RS02385;old_locus_tag=NLI98_02385 NZ_CP100601.1 Protein Homology CDS 490661 491719 . - 0 ID=cds-WP_002918568.1;Parent=gene-NLI98_RS02385;Dbxref=Genbank:WP_002918568.1;Name=WP_002918568.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229074.1;locus_tag=NLI98_RS02385;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_002918568.1;transl_table=11 NZ_CP100601.1 RefSeq gene 491807 493174 . - . ID=gene-NLI98_RS02390;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=NLI98_RS02390;old_locus_tag=NLI98_02390 NZ_CP100601.1 Protein Homology CDS 491807 493174 . - 0 ID=cds-WP_004174125.1;Parent=gene-NLI98_RS02390;Dbxref=Genbank:WP_004174125.1;Name=WP_004174125.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229073.1;locus_tag=NLI98_RS02390;product=serine endoprotease DegQ;protein_id=WP_004174125.1;transl_table=11 NZ_CP100601.1 RefSeq gene 493348 493746 . - . ID=gene-NLI98_RS02395;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=NLI98_RS02395;old_locus_tag=NLI98_02395 NZ_CP100601.1 Protein Homology CDS 493348 493746 . - 0 ID=cds-WP_002918565.1;Parent=gene-NLI98_RS02395;Dbxref=Genbank:WP_002918565.1;Name=WP_002918565.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229072.1;locus_tag=NLI98_RS02395;product=Z-ring associated protein ZapG;protein_id=WP_002918565.1;transl_table=11 NZ_CP100601.1 RefSeq gene 493937 495064 . + . ID=gene-NLI98_RS02400;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=NLI98_RS02400;old_locus_tag=NLI98_02400 NZ_CP100601.1 Protein Homology CDS 493937 495064 . + 0 ID=cds-WP_004144945.1;Parent=gene-NLI98_RS02400;Dbxref=Genbank:WP_004144945.1;Name=WP_004144945.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229071.1;locus_tag=NLI98_RS02400;product=cell division protein ZapE;protein_id=WP_004144945.1;transl_table=11 NZ_CP100601.1 RefSeq gene 495330 495758 . + . ID=gene-NLI98_RS02405;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=NLI98_RS02405;old_locus_tag=NLI98_02405 NZ_CP100601.1 Protein Homology CDS 495330 495758 . + 0 ID=cds-WP_002918559.1;Parent=gene-NLI98_RS02405;Dbxref=Genbank:WP_002918559.1;Name=WP_002918559.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=NLI98_RS02405;product=50S ribosomal protein L13;protein_id=WP_002918559.1;transl_table=11 NZ_CP100601.1 RefSeq gene 495774 496166 . + . ID=gene-NLI98_RS02410;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=NLI98_RS02410;old_locus_tag=NLI98_02410 NZ_CP100601.1 Protein Homology CDS 495774 496166 . + 0 ID=cds-WP_000829818.1;Parent=gene-NLI98_RS02410;Dbxref=Genbank:WP_000829818.1;Name=WP_000829818.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=NLI98_RS02410;product=30S ribosomal protein S9;protein_id=WP_000829818.1;transl_table=11 NZ_CP100601.1 RefSeq gene 496224 496508 . + . ID=gene-NLI98_RS02415;Name=NLI98_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02415;old_locus_tag=NLI98_02415 NZ_CP100601.1 GeneMarkS-2+ CDS 496224 496508 . + 0 ID=cds-WP_135801240.1;Parent=gene-NLI98_RS02415;Dbxref=Genbank:WP_135801240.1;Name=WP_135801240.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS02415;product=hypothetical protein;protein_id=WP_135801240.1;transl_table=11 NZ_CP100601.1 RefSeq gene 496478 497116 . + . ID=gene-NLI98_RS02420;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=NLI98_RS02420;old_locus_tag=NLI98_02420 NZ_CP100601.1 Protein Homology CDS 496478 497116 . + 0 ID=cds-WP_002918467.1;Parent=gene-NLI98_RS02420;Dbxref=Genbank:WP_002918467.1;Name=WP_002918467.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000257299.1;locus_tag=NLI98_RS02420;product=stringent starvation protein A;protein_id=WP_002918467.1;transl_table=11 NZ_CP100601.1 RefSeq gene 497120 497614 . + . ID=gene-NLI98_RS02425;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=NLI98_RS02425;old_locus_tag=NLI98_02425 NZ_CP100601.1 Protein Homology CDS 497120 497614 . + 0 ID=cds-WP_004188423.1;Parent=gene-NLI98_RS02425;Dbxref=Genbank:WP_004188423.1;Name=WP_004188423.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229067.1;locus_tag=NLI98_RS02425;product=ClpXP protease specificity-enhancing factor;protein_id=WP_004188423.1;transl_table=11 NZ_CP100601.1 RefSeq gene 497739 498443 . + . ID=gene-NLI98_RS02430;Name=NLI98_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02430;old_locus_tag=NLI98_02430 NZ_CP100601.1 Protein Homology CDS 497739 498443 . + 0 ID=cds-WP_004188425.1;Parent=gene-NLI98_RS02430;Dbxref=Genbank:WP_004188425.1;Name=WP_004188425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229066.1;locus_tag=NLI98_RS02430;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_004188425.1;transl_table=11 NZ_CP100601.1 RefSeq gene 498498 499916 . - . ID=gene-NLI98_RS02435;Name=NLI98_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02435;old_locus_tag=NLI98_02435 NZ_CP100601.1 Protein Homology CDS 498498 499916 . - 0 ID=cds-WP_002918461.1;Parent=gene-NLI98_RS02435;Dbxref=Genbank:WP_002918461.1;Name=WP_002918461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001540975.1;locus_tag=NLI98_RS02435;product=glutamate synthase small subunit;protein_id=WP_002918461.1;transl_table=11 NZ_CP100601.1 RefSeq gene 499926 504386 . - . ID=gene-NLI98_RS02440;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=NLI98_RS02440;old_locus_tag=NLI98_02440 NZ_CP100601.1 Protein Homology CDS 499926 504386 . - 0 ID=cds-WP_046653294.1;Parent=gene-NLI98_RS02440;Dbxref=Genbank:WP_046653294.1;Name=WP_046653294.1;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742510.1;locus_tag=NLI98_RS02440;product=glutamate synthase large subunit;protein_id=WP_046653294.1;transl_table=11 NZ_CP100601.1 RefSeq gene 505060 505992 . + . ID=gene-NLI98_RS02445;Name=NLI98_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02445;old_locus_tag=NLI98_02445 NZ_CP100601.1 Protein Homology CDS 505060 505992 . + 0 ID=cds-WP_060176130.1;Parent=gene-NLI98_RS02445;Dbxref=Genbank:WP_060176130.1;Name=WP_060176130.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959060.1;locus_tag=NLI98_RS02445;product=TIGR01212 family radical SAM protein;protein_id=WP_060176130.1;transl_table=11 NZ_CP100601.1 RefSeq gene 506044 507327 . - . ID=gene-NLI98_RS02450;Name=NLI98_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02450;old_locus_tag=NLI98_02450 NZ_CP100601.1 Protein Homology CDS 506044 507327 . - 0 ID=cds-WP_088498259.1;Parent=gene-NLI98_RS02450;Dbxref=Genbank:WP_088498259.1;Name=WP_088498259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229062.1;locus_tag=NLI98_RS02450;product=MFS transporter;protein_id=WP_088498259.1;transl_table=11 NZ_CP100601.1 RefSeq gene 507413 508429 . - . ID=gene-NLI98_RS02455;Name=NLI98_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02455;old_locus_tag=NLI98_02455 NZ_CP100601.1 Protein Homology CDS 507413 508429 . - 0 ID=cds-WP_002918451.1;Parent=gene-NLI98_RS02455;Dbxref=Genbank:WP_002918451.1;Name=WP_002918451.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229061.1;locus_tag=NLI98_RS02455;product=Zn-dependent oxidoreductase;protein_id=WP_002918451.1;transl_table=11 NZ_CP100601.1 RefSeq gene 508726 509790 . + . ID=gene-NLI98_RS02460;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=NLI98_RS02460;old_locus_tag=NLI98_02460 NZ_CP100601.1 Protein Homology CDS 508726 509790 . + 0 ID=cds-WP_004174133.1;Parent=gene-NLI98_RS02460;Dbxref=Genbank:WP_004174133.1;Name=WP_004174133.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229059.1;locus_tag=NLI98_RS02460;product=mannonate dehydratase;protein_id=WP_004174133.1;transl_table=11 NZ_CP100601.1 RefSeq gene 509937 512276 . + . ID=gene-NLI98_RS02465;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=NLI98_RS02465;old_locus_tag=NLI98_02465 NZ_CP100601.1 Protein Homology CDS 509937 512276 . + 0 ID=cds-WP_002918444.1;Parent=gene-NLI98_RS02465;Dbxref=Genbank:WP_002918444.1;Name=WP_002918444.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229058.1;locus_tag=NLI98_RS02465;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_002918444.1;transl_table=11 NZ_CP100601.1 RefSeq gene 512510 513163 . + . ID=gene-NLI98_RS02470;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=NLI98_RS02470;old_locus_tag=NLI98_02470 NZ_CP100601.1 Protein Homology CDS 512510 513163 . + 0 ID=cds-WP_004211948.1;Parent=gene-NLI98_RS02470;Dbxref=Genbank:WP_004211948.1;Name=WP_004211948.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229057.1;locus_tag=NLI98_RS02470;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_004211948.1;transl_table=11 NZ_CP100601.1 RefSeq gene 513160 513885 . + . ID=gene-NLI98_RS02475;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=NLI98_RS02475;old_locus_tag=NLI98_02475 NZ_CP100601.1 Protein Homology CDS 513160 513885 . + 0 ID=cds-WP_009309634.1;Parent=gene-NLI98_RS02475;Dbxref=Genbank:WP_009309634.1;Name=WP_009309634.1;Ontology_term=GO:0009252,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229056.1;locus_tag=NLI98_RS02475;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_009309634.1;transl_table=11 NZ_CP100601.1 RefSeq gene 513949 514221 . - . ID=gene-NLI98_RS02480;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=NLI98_RS02480;old_locus_tag=NLI98_02480 NZ_CP100601.1 Protein Homology CDS 513949 514221 . - 0 ID=cds-WP_002918431.1;Parent=gene-NLI98_RS02480;Dbxref=Genbank:WP_002918431.1;Name=WP_002918431.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000216792.1;locus_tag=NLI98_RS02480;product=PTS phosphocarrier protein NPr;protein_id=WP_002918431.1;transl_table=11 NZ_CP100601.1 RefSeq gene 514218 515072 . - . ID=gene-NLI98_RS02485;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=NLI98_RS02485;old_locus_tag=NLI98_02485 NZ_CP100601.1 Protein Homology CDS 514218 515072 . - 0 ID=cds-WP_002918428.1;Parent=gene-NLI98_RS02485;Dbxref=Genbank:WP_002918428.1;Name=WP_002918428.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229054.1;locus_tag=NLI98_RS02485;product=RNase adapter RapZ;protein_id=WP_002918428.1;transl_table=11 NZ_CP100601.1 RefSeq gene 515118 515606 . - . ID=gene-NLI98_RS02490;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=NLI98_RS02490;old_locus_tag=NLI98_02490 NZ_CP100601.1 Protein Homology CDS 515118 515606 . - 0 ID=cds-WP_004144926.1;Parent=gene-NLI98_RS02490;Dbxref=Genbank:WP_004144926.1;Name=WP_004144926.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229053.1;locus_tag=NLI98_RS02490;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_004144926.1;transl_table=11 NZ_CP100601.1 RefSeq gene 515677 515964 . - . ID=gene-NLI98_RS02495;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=NLI98_RS02495;old_locus_tag=NLI98_02495 NZ_CP100601.1 Protein Homology CDS 515677 515964 . - 0 ID=cds-WP_002918423.1;Parent=gene-NLI98_RS02495;Dbxref=Genbank:WP_002918423.1;Name=WP_002918423.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229052.1;locus_tag=NLI98_RS02495;product=ribosome hibernation promoting factor;protein_id=WP_002918423.1;transl_table=11 NZ_CP100601.1 RefSeq gene 515987 517420 . - . ID=gene-NLI98_RS02500;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=NLI98_RS02500;old_locus_tag=NLI98_02500 NZ_CP100601.1 Protein Homology CDS 515987 517420 . - 0 ID=cds-WP_002918420.1;Parent=gene-NLI98_RS02500;Dbxref=Genbank:WP_002918420.1;Name=WP_002918420.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229051.1;locus_tag=NLI98_RS02500;product=RNA polymerase factor sigma-54;protein_id=WP_002918420.1;transl_table=11 NZ_CP100601.1 RefSeq gene 517468 518193 . - . ID=gene-NLI98_RS02505;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=NLI98_RS02505;old_locus_tag=NLI98_02505 NZ_CP100601.1 Protein Homology CDS 517468 518193 . - 0 ID=cds-WP_002918417.1;Parent=gene-NLI98_RS02505;Dbxref=Genbank:WP_002918417.1;Name=WP_002918417.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=NLI98_RS02505;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_002918417.1;transl_table=11 NZ_CP100601.1 RefSeq gene 518200 518745 . - . ID=gene-NLI98_RS02510;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=NLI98_RS02510;old_locus_tag=NLI98_02510 NZ_CP100601.1 Protein Homology CDS 518200 518745 . - 0 ID=cds-WP_002918415.1;Parent=gene-NLI98_RS02510;Dbxref=Genbank:WP_002918415.1;Name=WP_002918415.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229049.1;locus_tag=NLI98_RS02510;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_002918415.1;transl_table=11 NZ_CP100601.1 RefSeq gene 518714 519289 . - . ID=gene-NLI98_RS02515;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=NLI98_RS02515;old_locus_tag=NLI98_02515 NZ_CP100601.1 Protein Homology CDS 518714 519289 . - 0 ID=cds-WP_002918413.1;Parent=gene-NLI98_RS02515;Dbxref=Genbank:WP_002918413.1;Name=WP_002918413.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229048.1;locus_tag=NLI98_RS02515;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_002918413.1;transl_table=11 NZ_CP100601.1 RefSeq gene 519286 519852 . - . ID=gene-NLI98_RS02520;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=NLI98_RS02520;old_locus_tag=NLI98_02520 NZ_CP100601.1 Protein Homology CDS 519286 519852 . - 0 ID=cds-WP_002918405.1;Parent=gene-NLI98_RS02520;Dbxref=Genbank:WP_002918405.1;Name=WP_002918405.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229047.1;locus_tag=NLI98_RS02520;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_002918405.1;transl_table=11 NZ_CP100601.1 RefSeq gene 519867 520853 . - . ID=gene-NLI98_RS02525;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=NLI98_RS02525;old_locus_tag=NLI98_02525 NZ_CP100601.1 Protein Homology CDS 519867 520853 . - 0 ID=cds-WP_019704930.1;Parent=gene-NLI98_RS02525;Dbxref=Genbank:WP_019704930.1;Name=WP_019704930.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417664.1;locus_tag=NLI98_RS02525;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_019704930.1;transl_table=11 NZ_CP100601.1 RefSeq gene 520868 521845 . - . ID=gene-NLI98_RS02530;Name=NLI98_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02530;old_locus_tag=NLI98_02530 NZ_CP100601.1 Protein Homology CDS 520868 521845 . - 0 ID=cds-WP_002918397.1;Parent=gene-NLI98_RS02530;Dbxref=Genbank:WP_002918397.1;Name=WP_002918397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229045.1;locus_tag=NLI98_RS02530;product=calcium/sodium antiporter;protein_id=WP_002918397.1;transl_table=11 NZ_CP100601.1 RefSeq gene 522055 522867 . + . ID=gene-NLI98_RS02535;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=NLI98_RS02535;old_locus_tag=NLI98_02535 NZ_CP100601.1 Protein Homology CDS 522055 522867 . + 0 ID=cds-WP_004150950.1;Parent=gene-NLI98_RS02535;Dbxref=Genbank:WP_004150950.1;Name=WP_004150950.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883529.1;locus_tag=NLI98_RS02535;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_004150950.1;transl_table=11 NZ_CP100601.1 RefSeq gene 522875 523657 . + . ID=gene-NLI98_RS02540;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=NLI98_RS02540;old_locus_tag=NLI98_02540 NZ_CP100601.1 Protein Homology CDS 522875 523657 . + 0 ID=cds-WP_004150949.1;Parent=gene-NLI98_RS02540;Dbxref=Genbank:WP_004150949.1;Name=WP_004150949.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014071945.1;locus_tag=NLI98_RS02540;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_004150949.1;transl_table=11 NZ_CP100601.1 RefSeq gene 523662 524213 . + . ID=gene-NLI98_RS02545;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=NLI98_RS02545;old_locus_tag=NLI98_02545 NZ_CP100601.1 Protein Homology CDS 523662 524213 . + 0 ID=cds-WP_002918387.1;Parent=gene-NLI98_RS02545;Dbxref=Genbank:WP_002918387.1;Name=WP_002918387.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229042.1;locus_tag=NLI98_RS02545;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_002918387.1;transl_table=11 NZ_CP100601.1 RefSeq gene 524232 524867 . + . ID=gene-NLI98_RS02550;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=NLI98_RS02550;old_locus_tag=NLI98_02550 NZ_CP100601.1 Protein Homology CDS 524232 524867 . + 0 ID=cds-WP_002918386.1;Parent=gene-NLI98_RS02550;Dbxref=Genbank:WP_002918386.1;Name=WP_002918386.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229041.1;locus_tag=NLI98_RS02550;product=phospholipid-binding protein MlaC;protein_id=WP_002918386.1;transl_table=11 NZ_CP100601.1 RefSeq gene 524867 525154 . + . ID=gene-NLI98_RS02555;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=NLI98_RS02555;old_locus_tag=NLI98_02555 NZ_CP100601.1 Protein Homology CDS 524867 525154 . + 0 ID=cds-WP_004185850.1;Parent=gene-NLI98_RS02555;Dbxref=Genbank:WP_004185850.1;Name=WP_004185850.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185850.1;locus_tag=NLI98_RS02555;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_004185850.1;transl_table=11 NZ_CP100601.1 RefSeq gene 525294 525548 . + . ID=gene-NLI98_RS02560;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=NLI98_RS02560;old_locus_tag=NLI98_02560 NZ_CP100601.1 Protein Homology CDS 525294 525548 . + 0 ID=cds-WP_004144910.1;Parent=gene-NLI98_RS02560;Dbxref=Genbank:WP_004144910.1;Name=WP_004144910.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229039.1;locus_tag=NLI98_RS02560;product=BolA family iron metabolism protein IbaG;protein_id=WP_004144910.1;transl_table=11 NZ_CP100601.1 RefSeq gene 525602 526861 . + . ID=gene-NLI98_RS02565;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=NLI98_RS02565;old_locus_tag=NLI98_02565 NZ_CP100601.1 Protein Homology CDS 525602 526861 . + 0 ID=cds-WP_002918382.1;Parent=gene-NLI98_RS02565;Dbxref=Genbank:WP_002918382.1;Name=WP_002918382.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004868122.1;locus_tag=NLI98_RS02565;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_002918382.1;transl_table=11 NZ_CP100601.1 RefSeq gene 526917 527189 . - . ID=gene-NLI98_RS02570;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;locus_tag=NLI98_RS02570;old_locus_tag=NLI98_02570 NZ_CP100601.1 Protein Homology CDS 526917 527189 . - 0 ID=cds-WP_002918381.1;Parent=gene-NLI98_RS02570;Dbxref=Genbank:WP_002918381.1;Name=WP_002918381.1;gbkey=CDS;gene=sfsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229037.1;locus_tag=NLI98_RS02570;product=DNA-binding transcriptional regulator SfsB;protein_id=WP_002918381.1;transl_table=11 NZ_CP100601.1 RefSeq gene 527389 528360 . - . ID=gene-NLI98_RS02575;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=NLI98_RS02575;old_locus_tag=NLI98_02575 NZ_CP100601.1 Protein Homology CDS 527389 528360 . - 0 ID=cds-WP_004144907.1;Parent=gene-NLI98_RS02575;Dbxref=Genbank:WP_004144907.1;Name=WP_004144907.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229036.1;locus_tag=NLI98_RS02575;product=octaprenyl diphosphate synthase;protein_id=WP_004144907.1;transl_table=11 NZ_CP100601.1 RefSeq gene 528621 528932 . + . ID=gene-NLI98_RS02580;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=NLI98_RS02580;old_locus_tag=NLI98_02580 NZ_CP100601.1 Protein Homology CDS 528621 528932 . + 0 ID=cds-WP_002918379.1;Parent=gene-NLI98_RS02580;Dbxref=Genbank:WP_002918379.1;Name=WP_002918379.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960603.1;locus_tag=NLI98_RS02580;product=50S ribosomal protein L21;protein_id=WP_002918379.1;transl_table=11 NZ_CP100601.1 RefSeq gene 528953 529210 . + . ID=gene-NLI98_RS02585;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=NLI98_RS02585;old_locus_tag=NLI98_02585 NZ_CP100601.1 Protein Homology CDS 528953 529210 . + 0 ID=cds-WP_002434222.1;Parent=gene-NLI98_RS02585;Dbxref=Genbank:WP_002434222.1;Name=WP_002434222.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=NLI98_RS02585;product=50S ribosomal protein L27;protein_id=WP_002434222.1;transl_table=11 NZ_CP100601.1 RefSeq gene 529304 530269 . + . ID=gene-NLI98_RS02590;Name=NLI98_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02590;old_locus_tag=NLI98_02590 NZ_CP100601.1 Protein Homology CDS 529304 530269 . + 0 ID=cds-WP_004149938.1;Parent=gene-NLI98_RS02590;Dbxref=Genbank:WP_004149938.1;Name=WP_004149938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135318.1;locus_tag=NLI98_RS02590;product=DMT family transporter;protein_id=WP_004149938.1;transl_table=11 NZ_CP100601.1 RefSeq gene 530285 531457 . + . ID=gene-NLI98_RS02595;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=NLI98_RS02595;old_locus_tag=NLI98_02595 NZ_CP100601.1 Protein Homology CDS 530285 531457 . + 0 ID=cds-WP_088498260.1;Parent=gene-NLI98_RS02595;Dbxref=Genbank:WP_088498260.1;Name=WP_088498260.1;Ontology_term=GO:0042254,GO:0005525;gbkey=CDS;gene=cgtA;go_function=GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229032.1;locus_tag=NLI98_RS02595;product=Obg family GTPase CgtA;protein_id=WP_088498260.1;transl_table=11 NZ_CP100601.1 RefSeq gene 531509 532942 . - . ID=gene-NLI98_RS02600;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=NLI98_RS02600;old_locus_tag=NLI98_02600 NZ_CP100601.1 Protein Homology CDS 531509 532942 . - 0 ID=cds-WP_088498261.1;Parent=gene-NLI98_RS02600;Dbxref=Genbank:WP_088498261.1;Name=WP_088498261.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001212660.1;locus_tag=NLI98_RS02600;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_088498261.1;transl_table=11 NZ_CP100601.1 RefSeq gene 533178 533654 . + . ID=gene-NLI98_RS02605;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=NLI98_RS02605;old_locus_tag=NLI98_02605 NZ_CP100601.1 Protein Homology CDS 533178 533654 . + 0 ID=cds-WP_002918375.1;Parent=gene-NLI98_RS02605;Dbxref=Genbank:WP_002918375.1;Name=WP_002918375.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178768.1;locus_tag=NLI98_RS02605;product=transcription elongation factor GreA;protein_id=WP_002918375.1;transl_table=11 NZ_CP100601.1 RefSeq gene 533807 534100 . - . ID=gene-NLI98_RS02610;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=NLI98_RS02610;old_locus_tag=NLI98_02610 NZ_CP100601.1 Protein Homology CDS 533807 534100 . - 0 ID=cds-WP_002918374.1;Parent=gene-NLI98_RS02610;Dbxref=Genbank:WP_002918374.1;Name=WP_002918374.1;gbkey=CDS;gene=yhbY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=NLI98_RS02610;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_002918374.1;transl_table=11 NZ_CP100601.1 RefSeq gene 534224 534853 . + . ID=gene-NLI98_RS02615;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=NLI98_RS02615;old_locus_tag=NLI98_02615 NZ_CP100601.1 Protein Homology CDS 534224 534853 . + 0 ID=cds-WP_002918373.1;Parent=gene-NLI98_RS02615;Dbxref=Genbank:WP_002918373.1;Name=WP_002918373.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229028.1;locus_tag=NLI98_RS02615;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_002918373.1;transl_table=11 NZ_CP100601.1 RefSeq gene 534953 536887 . + . ID=gene-NLI98_RS02620;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=NLI98_RS02620;old_locus_tag=NLI98_02620 NZ_CP100601.1 Protein Homology CDS 534953 536887 . + 0 ID=cds-WP_002918372.1;Parent=gene-NLI98_RS02620;Dbxref=Genbank:WP_002918372.1;Name=WP_002918372.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833437.1;locus_tag=NLI98_RS02620;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_002918372.1;transl_table=11 NZ_CP100601.1 RefSeq gene 536981 537829 . + . ID=gene-NLI98_RS02625;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=NLI98_RS02625;old_locus_tag=NLI98_02625 NZ_CP100601.1 Protein Homology CDS 536981 537829 . + 0 ID=cds-WP_002918371.1;Parent=gene-NLI98_RS02625;Dbxref=Genbank:WP_002918371.1;Name=WP_002918371.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229026.1;locus_tag=NLI98_RS02625;product=dihydropteroate synthase;protein_id=WP_002918371.1;transl_table=11 NZ_CP100601.1 RefSeq gene 537822 539159 . + . ID=gene-NLI98_RS02630;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=NLI98_RS02630;old_locus_tag=NLI98_02630 NZ_CP100601.1 Protein Homology CDS 537822 539159 . + 0 ID=cds-WP_002918370.1;Parent=gene-NLI98_RS02630;Dbxref=Genbank:WP_002918370.1;Name=WP_002918370.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229025.1;locus_tag=NLI98_RS02630;product=phosphoglucosamine mutase;protein_id=WP_002918370.1;transl_table=11 NZ_CP100601.1 RefSeq gene 539389 539718 . + . ID=gene-NLI98_RS02635;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=NLI98_RS02635;old_locus_tag=NLI98_02635 NZ_CP100601.1 Protein Homology CDS 539389 539718 . + 0 ID=cds-WP_002918369.1;Parent=gene-NLI98_RS02635;Dbxref=Genbank:WP_002918369.1;Name=WP_002918369.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229024.1;locus_tag=NLI98_RS02635;product=preprotein translocase subunit SecG;protein_id=WP_002918369.1;transl_table=11 NZ_CP100601.1 RefSeq gene 539728 539814 . + . ID=gene-NLI98_RS02640;Name=NLI98_RS02640;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS02640;old_locus_tag=NLI98_02640 NZ_CP100601.1 tRNAscan-SE tRNA 539728 539814 . + . ID=rna-NLI98_RS02640;Parent=gene-NLI98_RS02640;anticodon=(pos:539762..539764);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS02640;product=tRNA-Leu NZ_CP100601.1 tRNAscan-SE exon 539728 539814 . + . ID=exon-NLI98_RS02640-1;Parent=rna-NLI98_RS02640;anticodon=(pos:539762..539764);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS02640;product=tRNA-Leu NZ_CP100601.1 RefSeq gene 540112 540360 . + . ID=gene-NLI98_RS02645;Name=NLI98_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02645;old_locus_tag=NLI98_02645 NZ_CP100601.1 Protein Homology CDS 540112 540360 . + 0 ID=cds-WP_002918368.1;Parent=gene-NLI98_RS02645;Dbxref=Genbank:WP_002918368.1;Name=WP_002918368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229023.1;locus_tag=NLI98_RS02645;product=hypothetical protein;protein_id=WP_002918368.1;transl_table=11 NZ_CP100601.1 RefSeq gene 540402 540953 . - . ID=gene-NLI98_RS02650;Name=NLI98_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02650;old_locus_tag=NLI98_02650 NZ_CP100601.1 Protein Homology CDS 540402 540953 . - 0 ID=cds-WP_004211952.1;Parent=gene-NLI98_RS02650;Dbxref=Genbank:WP_004211952.1;Name=WP_004211952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181413.1;locus_tag=NLI98_RS02650;product=YfaZ family outer membrane protein;protein_id=WP_004211952.1;transl_table=11 NZ_CP100601.1 RefSeq gene 541294 541923 . - . ID=gene-NLI98_RS02655;Name=NLI98_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02655;old_locus_tag=NLI98_02655 NZ_CP100601.1 Protein Homology CDS 541294 541923 . - 0 ID=cds-WP_004174150.1;Parent=gene-NLI98_RS02655;Dbxref=Genbank:WP_004174150.1;Name=WP_004174150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229020.1;locus_tag=NLI98_RS02655;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_004174150.1;transl_table=11 NZ_CP100601.1 RefSeq gene 542093 543436 . - . ID=gene-NLI98_RS02660;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=NLI98_RS02660;old_locus_tag=NLI98_02660 NZ_CP100601.1 Protein Homology CDS 542093 543436 . - 0 ID=cds-WP_004144895.1;Parent=gene-NLI98_RS02660;Dbxref=Genbank:WP_004144895.1;Name=WP_004144895.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229019.1;locus_tag=NLI98_RS02660;product=argininosuccinate synthase;protein_id=WP_004144895.1;transl_table=11 NZ_CP100601.1 RefSeq gene 543744 543820 . + . ID=gene-NLI98_RS02665;Name=NLI98_RS02665;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS02665;old_locus_tag=NLI98_02665 NZ_CP100601.1 tRNAscan-SE tRNA 543744 543820 . + . ID=rna-NLI98_RS02665;Parent=gene-NLI98_RS02665;anticodon=(pos:543778..543780);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS02665;product=tRNA-Met NZ_CP100601.1 tRNAscan-SE exon 543744 543820 . + . ID=exon-NLI98_RS02665-1;Parent=rna-NLI98_RS02665;anticodon=(pos:543778..543780);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS02665;product=tRNA-Met NZ_CP100601.1 RefSeq gene 544029 544481 . + . ID=gene-NLI98_RS02670;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=NLI98_RS02670;old_locus_tag=NLI98_02670 NZ_CP100601.1 Protein Homology CDS 544029 544481 . + 0 ID=cds-WP_002918364.1;Parent=gene-NLI98_RS02670;Dbxref=Genbank:WP_002918364.1;Name=WP_002918364.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=NLI98_RS02670;product=ribosome maturation factor RimP;protein_id=WP_002918364.1;transl_table=11 NZ_CP100601.1 RefSeq gene 544509 545996 . + . ID=gene-NLI98_RS02675;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=NLI98_RS02675;old_locus_tag=NLI98_02675 NZ_CP100601.1 Protein Homology CDS 544509 545996 . + 0 ID=cds-WP_002918252.1;Parent=gene-NLI98_RS02675;Dbxref=Genbank:WP_002918252.1;Name=WP_002918252.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005131833.1;locus_tag=NLI98_RS02675;product=transcription termination factor NusA;protein_id=WP_002918252.1;transl_table=11 NZ_CP100601.1 RefSeq gene 546021 548711 . + . ID=gene-NLI98_RS02680;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=NLI98_RS02680;old_locus_tag=NLI98_02680 NZ_CP100601.1 Protein Homology CDS 546021 548711 . + 0 ID=cds-WP_002918250.1;Parent=gene-NLI98_RS02680;Dbxref=Genbank:WP_002918250.1;Name=WP_002918250.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229014.1;locus_tag=NLI98_RS02680;product=translation initiation factor IF-2;protein_id=WP_002918250.1;transl_table=11 NZ_CP100601.1 RefSeq gene 548814 549215 . + . ID=gene-NLI98_RS02685;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=NLI98_RS02685;old_locus_tag=NLI98_02685 NZ_CP100601.1 Protein Homology CDS 548814 549215 . + 0 ID=cds-WP_002918248.1;Parent=gene-NLI98_RS02685;Dbxref=Genbank:WP_002918248.1;Name=WP_002918248.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001712908.1;locus_tag=NLI98_RS02685;product=30S ribosome-binding factor RbfA;protein_id=WP_002918248.1;transl_table=11 NZ_CP100601.1 RefSeq gene 549215 550159 . + . ID=gene-NLI98_RS02690;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=NLI98_RS02690;old_locus_tag=NLI98_02690 NZ_CP100601.1 Protein Homology CDS 549215 550159 . + 0 ID=cds-WP_004144892.1;Parent=gene-NLI98_RS02690;Dbxref=Genbank:WP_004144892.1;Name=WP_004144892.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229012.1;locus_tag=NLI98_RS02690;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_004144892.1;transl_table=11 NZ_CP100601.1 RefSeq gene 550308 550577 . + . ID=gene-NLI98_RS02695;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=NLI98_RS02695;old_locus_tag=NLI98_02695 NZ_CP100601.1 Protein Homology CDS 550308 550577 . + 0 ID=cds-WP_002918244.1;Parent=gene-NLI98_RS02695;Dbxref=Genbank:WP_002918244.1;Name=WP_002918244.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=NLI98_RS02695;product=30S ribosomal protein S15;protein_id=WP_002918244.1;transl_table=11 NZ_CP100601.1 RefSeq gene 550820 552955 . + . ID=gene-NLI98_RS02700;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=NLI98_RS02700;old_locus_tag=NLI98_02700 NZ_CP100601.1 Protein Homology CDS 550820 552955 . + 0 ID=cds-WP_004150944.1;Parent=gene-NLI98_RS02700;Dbxref=Genbank:WP_004150944.1;Name=WP_004150944.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229009.1;locus_tag=NLI98_RS02700;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_004150944.1;transl_table=11 NZ_CP100601.1 RefSeq gene 553064 553948 . + . ID=gene-NLI98_RS02705;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=NLI98_RS02705;old_locus_tag=NLI98_02705 NZ_CP100601.1 Protein Homology CDS 553064 553948 . + 0 ID=cds-WP_002918241.1;Parent=gene-NLI98_RS02705;Dbxref=Genbank:WP_002918241.1;Name=WP_002918241.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802045.1;locus_tag=NLI98_RS02705;product=lipoprotein NlpI;protein_id=WP_002918241.1;transl_table=11 NZ_CP100601.1 RefSeq gene 554053 554133 . + . ID=gene-NLI98_RS02710;Name=yrbN;gbkey=Gene;gene=yrbN;gene_biotype=protein_coding;locus_tag=NLI98_RS02710;old_locus_tag=NLI98_02710 NZ_CP100601.1 Protein Homology CDS 554053 554133 . + 0 ID=cds-WP_085903200.1;Parent=gene-NLI98_RS02710;Dbxref=Genbank:WP_085903200.1;Name=WP_085903200.1;gbkey=CDS;gene=yrbN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_002791258.1;locus_tag=NLI98_RS02710;product=protein YrbN;protein_id=WP_085903200.1;transl_table=11 NZ_CP100601.1 RefSeq gene 554126 556057 . + . ID=gene-NLI98_RS02715;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=NLI98_RS02715;old_locus_tag=NLI98_02715 NZ_CP100601.1 Protein Homology CDS 554126 556057 . + 0 ID=cds-WP_004150943.1;Parent=gene-NLI98_RS02715;Dbxref=Genbank:WP_004150943.1;Name=WP_004150943.1;gbkey=CDS;gene=deaD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229007.1;locus_tag=NLI98_RS02715;product=ATP-dependent RNA helicase DeaD;protein_id=WP_004150943.1;transl_table=11 NZ_CP100601.1 RefSeq gene 556202 557446 . + . ID=gene-NLI98_RS02720;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=NLI98_RS02720;old_locus_tag=NLI98_02720 NZ_CP100601.1 Protein Homology CDS 556202 557446 . + 0 ID=cds-WP_088498264.1;Parent=gene-NLI98_RS02720;Dbxref=Genbank:WP_088498264.1;Name=WP_088498264.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229006.1;locus_tag=NLI98_RS02720;product=tryptophan permease;protein_id=WP_088498264.1;transl_table=11 NZ_CP100601.1 RefSeq gene 557491 558498 . - . ID=gene-NLI98_RS02725;Name=NLI98_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02725;old_locus_tag=NLI98_02725 NZ_CP100601.1 Protein Homology CDS 557491 558498 . - 0 ID=cds-WP_002918234.1;Parent=gene-NLI98_RS02725;Dbxref=Genbank:WP_002918234.1;Name=WP_002918234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229005.1;locus_tag=NLI98_RS02725;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_002918234.1;transl_table=11 NZ_CP100601.1 RefSeq gene 558642 559520 . - . ID=gene-NLI98_RS02730;Name=NLI98_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02730;old_locus_tag=NLI98_02730 NZ_CP100601.1 Protein Homology CDS 558642 559520 . - 0 ID=cds-WP_002918233.1;Parent=gene-NLI98_RS02730;Dbxref=Genbank:WP_002918233.1;Name=WP_002918233.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229004.1;locus_tag=NLI98_RS02730;product=U32 family peptidase;protein_id=WP_002918233.1;transl_table=11 NZ_CP100601.1 RefSeq gene 559526 560521 . - . ID=gene-NLI98_RS02735;Name=NLI98_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02735;old_locus_tag=NLI98_02735 NZ_CP100601.1 Protein Homology CDS 559526 560521 . - 0 ID=cds-WP_002918232.1;Parent=gene-NLI98_RS02735;Dbxref=Genbank:WP_002918232.1;Name=WP_002918232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=NLI98_RS02735;product=U32 family peptidase;protein_id=WP_002918232.1;transl_table=11 NZ_CP100601.1 RefSeq gene 560743 561267 . + . ID=gene-NLI98_RS02740;Name=NLI98_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02740;old_locus_tag=NLI98_02740 NZ_CP100601.1 Protein Homology CDS 560743 561267 . + 0 ID=cds-WP_002918231.1;Parent=gene-NLI98_RS02740;Dbxref=Genbank:WP_002918231.1;Name=WP_002918231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229002.1;locus_tag=NLI98_RS02740;product=SCP2 domain-containing protein;protein_id=WP_002918231.1;transl_table=11 NZ_CP100601.1 RefSeq gene 561261 561764 . + . ID=gene-NLI98_RS02745;Name=NLI98_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02745;old_locus_tag=NLI98_02745 NZ_CP100601.1 Protein Homology CDS 561261 561764 . + 0 ID=cds-WP_002918229.1;Parent=gene-NLI98_RS02745;Dbxref=Genbank:WP_002918229.1;Name=WP_002918229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144885.1;locus_tag=NLI98_RS02745;product=N-acetyltransferase;protein_id=WP_002918229.1;transl_table=11 NZ_CP100601.1 RefSeq gene 561751 562041 . - . ID=gene-NLI98_RS02750;Name=NLI98_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02750;old_locus_tag=NLI98_02750 NZ_CP100601.1 Protein Homology CDS 561751 562041 . - 0 ID=cds-WP_002918226.1;Parent=gene-NLI98_RS02750;Dbxref=Genbank:WP_002918226.1;Name=WP_002918226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229000.1;locus_tag=NLI98_RS02750;product=GIY-YIG nuclease family protein;protein_id=WP_002918226.1;transl_table=11 NZ_CP100601.1 RefSeq gene 562091 562534 . + . ID=gene-NLI98_RS02755;Name=NLI98_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02755;old_locus_tag=NLI98_02755 NZ_CP100601.1 Protein Homology CDS 562091 562534 . + 0 ID=cds-WP_002918223.1;Parent=gene-NLI98_RS02755;Dbxref=Genbank:WP_002918223.1;Name=WP_002918223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228999.1;locus_tag=NLI98_RS02755;product=YhbP family protein;protein_id=WP_002918223.1;transl_table=11 NZ_CP100601.1 RefSeq gene 562496 563032 . - . ID=gene-NLI98_RS02760;Name=NLI98_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02760;old_locus_tag=NLI98_02760 NZ_CP100601.1 Protein Homology CDS 562496 563032 . - 0 ID=cds-WP_002918221.1;Parent=gene-NLI98_RS02760;Dbxref=Genbank:WP_002918221.1;Name=WP_002918221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228998.1;locus_tag=NLI98_RS02760;product=type 1 glutamine amidotransferase;protein_id=WP_002918221.1;transl_table=11 NZ_CP100601.1 RefSeq gene 563161 563808 . + . ID=gene-NLI98_RS02765;Name=NLI98_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02765;old_locus_tag=NLI98_02765 NZ_CP100601.1 Protein Homology CDS 563161 563808 . + 0 ID=cds-WP_002918218.1;Parent=gene-NLI98_RS02765;Dbxref=Genbank:WP_002918218.1;Name=WP_002918218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228997.1;locus_tag=NLI98_RS02765;product=NAD(P)H-binding protein;protein_id=WP_002918218.1;transl_table=11 NZ_CP100601.1 RefSeq gene 563884 564924 . + . ID=gene-NLI98_RS02770;Name=NLI98_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02770;old_locus_tag=NLI98_02770 NZ_CP100601.1 Protein Homology CDS 563884 564924 . + 0 ID=cds-WP_088498265.1;Parent=gene-NLI98_RS02770;Dbxref=Genbank:WP_088498265.1;Name=WP_088498265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228996.1;locus_tag=NLI98_RS02770;product=permease;protein_id=WP_088498265.1;transl_table=11 NZ_CP100601.1 RefSeq gene 565046 565621 . - . ID=gene-NLI98_RS02775;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=NLI98_RS02775;old_locus_tag=NLI98_02775 NZ_CP100601.1 Protein Homology CDS 565046 565621 . - 0 ID=cds-WP_002918214.1;Parent=gene-NLI98_RS02775;Dbxref=Genbank:WP_002918214.1;Name=WP_002918214.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228995.1;locus_tag=NLI98_RS02775;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_002918214.1;transl_table=11 NZ_CP100601.1 RefSeq gene 565631 566221 . - . ID=gene-NLI98_RS02780;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=NLI98_RS02780;old_locus_tag=NLI98_02780 NZ_CP100601.1 Protein Homology CDS 565631 566221 . - 0 ID=cds-WP_002918211.1;Parent=gene-NLI98_RS02780;Dbxref=Genbank:WP_002918211.1;Name=WP_002918211.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228994.1;locus_tag=NLI98_RS02780;product=DnaA initiator-associating protein DiaA;protein_id=WP_002918211.1;transl_table=11 NZ_CP100601.1 RefSeq gene 566247 566633 . - . ID=gene-NLI98_RS02785;Name=NLI98_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02785;old_locus_tag=NLI98_02785 NZ_CP100601.1 Protein Homology CDS 566247 566633 . - 0 ID=cds-WP_002918206.1;Parent=gene-NLI98_RS02785;Dbxref=Genbank:WP_002918206.1;Name=WP_002918206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228993.1;locus_tag=NLI98_RS02785;product=YraN family protein;protein_id=WP_002918206.1;transl_table=11 NZ_CP100601.1 RefSeq gene 566591 568699 . - . ID=gene-NLI98_RS02790;Name=NLI98_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02790;old_locus_tag=NLI98_02790 NZ_CP100601.1 Protein Homology CDS 566591 568699 . - 0 ID=cds-WP_032423706.1;Parent=gene-NLI98_RS02790;Dbxref=Genbank:WP_032423706.1;Name=WP_032423706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228992.1;locus_tag=NLI98_RS02790;product=penicillin-binding protein activator;protein_id=WP_032423706.1;transl_table=11 NZ_CP100601.1 RefSeq gene 568763 569626 . + . ID=gene-NLI98_RS02795;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=NLI98_RS02795;old_locus_tag=NLI98_02795 NZ_CP100601.1 Protein Homology CDS 568763 569626 . + 0 ID=cds-WP_088498266.1;Parent=gene-NLI98_RS02795;Dbxref=Genbank:WP_088498266.1;Name=WP_088498266.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228991.1;locus_tag=NLI98_RS02795;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_088498266.1;transl_table=11 NZ_CP100601.1 RefSeq gene 569741 570631 . + . ID=gene-NLI98_RS02800;Name=NLI98_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02800;old_locus_tag=NLI98_02800 NZ_CP100601.1 Protein Homology CDS 569741 570631 . + 0 ID=cds-WP_162824747.1;Parent=gene-NLI98_RS02800;Dbxref=Genbank:WP_162824747.1;Name=WP_162824747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228990.1;locus_tag=NLI98_RS02800;product=Fic family protein;protein_id=WP_162824747.1;transl_table=11 NZ_CP100601.1 RefSeq gene 570666 571439 . - . ID=gene-NLI98_RS02805;Name=NLI98_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02805;old_locus_tag=NLI98_02805 NZ_CP100601.1 Protein Homology CDS 570666 571439 . - 0 ID=cds-WP_002918124.1;Parent=gene-NLI98_RS02805;Dbxref=Genbank:WP_002918124.1;Name=WP_002918124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228989.1;locus_tag=NLI98_RS02805;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_002918124.1;transl_table=11 NZ_CP100601.1 RefSeq gene 571550 572593 . - . ID=gene-NLI98_RS02810;Name=gatD;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=NLI98_RS02810;old_locus_tag=NLI98_02810 NZ_CP100601.1 Protein Homology CDS 571550 572593 . - 0 ID=cds-WP_014906878.1;Parent=gene-NLI98_RS02810;Dbxref=Genbank:WP_014906878.1;Name=WP_014906878.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;gene=gatD;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228988.1;locus_tag=NLI98_RS02810;product=galactitol-1-phosphate 5-dehydrogenase;protein_id=WP_014906878.1;transl_table=11 NZ_CP100601.1 RefSeq gene 572643 574025 . - . ID=gene-NLI98_RS02815;Name=NLI98_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02815;old_locus_tag=NLI98_02815 NZ_CP100601.1 Protein Homology CDS 572643 574025 . - 0 ID=cds-WP_002918121.1;Parent=gene-NLI98_RS02815;Dbxref=Genbank:WP_002918121.1;Name=WP_002918121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228987.1;locus_tag=NLI98_RS02815;product=PTS galactitol transporter subunit IIC;protein_id=WP_002918121.1;transl_table=11 NZ_CP100601.1 RefSeq gene 574031 574315 . - . ID=gene-NLI98_RS02820;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=NLI98_RS02820;old_locus_tag=NLI98_02820 NZ_CP100601.1 Protein Homology CDS 574031 574315 . - 0 ID=cds-WP_002918119.1;Parent=gene-NLI98_RS02820;Dbxref=Genbank:WP_002918119.1;Name=WP_002918119.1;gbkey=CDS;gene=gatB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228986.1;locus_tag=NLI98_RS02820;product=PTS galactitol transporter subunit IIB;protein_id=WP_002918119.1;transl_table=11 NZ_CP100601.1 RefSeq gene 574342 574809 . - . ID=gene-NLI98_RS02825;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=NLI98_RS02825;old_locus_tag=NLI98_02825 NZ_CP100601.1 Protein Homology CDS 574342 574809 . - 0 ID=cds-WP_002918116.1;Parent=gene-NLI98_RS02825;Dbxref=Genbank:WP_002918116.1;Name=WP_002918116.1;gbkey=CDS;gene=gatA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228985.1;locus_tag=NLI98_RS02825;product=PTS galactitol transporter subunit IIA;protein_id=WP_002918116.1;transl_table=11 NZ_CP100601.1 RefSeq gene 574824 576095 . - . ID=gene-NLI98_RS02830;Name=gatZ;gbkey=Gene;gene=gatZ;gene_biotype=protein_coding;locus_tag=NLI98_RS02830;old_locus_tag=NLI98_02830 NZ_CP100601.1 Protein Homology CDS 574824 576095 . - 0 ID=cds-WP_040221720.1;Parent=gene-NLI98_RS02830;Dbxref=Genbank:WP_040221720.1;Name=WP_040221720.1;gbkey=CDS;gene=gatZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228984.1;locus_tag=NLI98_RS02830;product=tagatose-bisphosphate aldolase subunit GatZ;protein_id=WP_040221720.1;transl_table=11 NZ_CP100601.1 RefSeq gene 576272 577087 . - . ID=gene-NLI98_RS02835;Name=NLI98_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02835;old_locus_tag=NLI98_02835 NZ_CP100601.1 Protein Homology CDS 576272 577087 . - 0 ID=cds-WP_002918068.1;Parent=gene-NLI98_RS02835;Dbxref=Genbank:WP_002918068.1;Name=WP_002918068.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228983.1;locus_tag=NLI98_RS02835;product=HPr family phosphocarrier protein;protein_id=WP_002918068.1;transl_table=11 NZ_CP100601.1 RefSeq gene 577098 578510 . - . ID=gene-NLI98_RS02840;Name=NLI98_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02840;old_locus_tag=NLI98_02840 NZ_CP100601.1 Protein Homology CDS 577098 578510 . - 0 ID=cds-WP_004149915.1;Parent=gene-NLI98_RS02840;Dbxref=Genbank:WP_004149915.1;Name=WP_004149915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228982.1;locus_tag=NLI98_RS02840;product=PTS fructose transporter subunit IIBC;protein_id=WP_004149915.1;transl_table=11 NZ_CP100601.1 RefSeq gene 578521 579435 . - . ID=gene-NLI98_RS02845;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=NLI98_RS02845;old_locus_tag=NLI98_02845 NZ_CP100601.1 Protein Homology CDS 578521 579435 . - 0 ID=cds-WP_002917970.1;Parent=gene-NLI98_RS02845;Dbxref=Genbank:WP_002917970.1;Name=WP_002917970.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228981.1;locus_tag=NLI98_RS02845;product=1-phosphofructokinase;protein_id=WP_002917970.1;transl_table=11 NZ_CP100601.1 RefSeq gene 579460 580314 . - . ID=gene-NLI98_RS02850;Name=NLI98_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02850;old_locus_tag=NLI98_02850 NZ_CP100601.1 Protein Homology CDS 579460 580314 . - 0 ID=cds-WP_002917968.1;Parent=gene-NLI98_RS02850;Dbxref=Genbank:WP_002917968.1;Name=WP_002917968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228980.1;locus_tag=NLI98_RS02850;product=tagatose bisphosphate family class II aldolase;protein_id=WP_002917968.1;transl_table=11 NZ_CP100601.1 RefSeq gene 580665 581468 . + . ID=gene-NLI98_RS02855;Name=NLI98_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02855;old_locus_tag=NLI98_02855 NZ_CP100601.1 Protein Homology CDS 580665 581468 . + 0 ID=cds-WP_004218217.1;Parent=gene-NLI98_RS02855;Dbxref=Genbank:WP_004218217.1;Name=WP_004218217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228978.1;locus_tag=NLI98_RS02855;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_004218217.1;transl_table=11 NZ_CP100601.1 RefSeq gene 581468 582418 . + . ID=gene-NLI98_RS02860;Name=NLI98_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02860;old_locus_tag=NLI98_02860 NZ_CP100601.1 Protein Homology CDS 581468 582418 . + 0 ID=cds-WP_002917963.1;Parent=gene-NLI98_RS02860;Dbxref=Genbank:WP_002917963.1;Name=WP_002917963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228977.1;locus_tag=NLI98_RS02860;product=sugar kinase;protein_id=WP_002917963.1;transl_table=11 NZ_CP100601.1 RefSeq gene 582473 584044 . - . ID=gene-NLI98_RS02865;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=NLI98_RS02865;old_locus_tag=NLI98_02865 NZ_CP100601.1 Protein Homology CDS 582473 584044 . - 0 ID=cds-WP_002917960.1;Parent=gene-NLI98_RS02865;Dbxref=Genbank:WP_002917960.1;Name=WP_002917960.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228976.1;locus_tag=NLI98_RS02865;product=galactarate dehydratase;protein_id=WP_002917960.1;transl_table=11 NZ_CP100601.1 RefSeq gene 584437 585768 . + . ID=gene-NLI98_RS02870;Name=NLI98_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02870;old_locus_tag=NLI98_02870 NZ_CP100601.1 Protein Homology CDS 584437 585768 . + 0 ID=cds-WP_159195393.1;Parent=gene-NLI98_RS02870;Dbxref=Genbank:WP_159195393.1;Name=WP_159195393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228974.1;locus_tag=NLI98_RS02870;product=MFS transporter;protein_id=WP_159195393.1;transl_table=11 NZ_CP100601.1 RefSeq gene 585795 586565 . + . ID=gene-NLI98_RS02875;Name=garL;gbkey=Gene;gene=garL;gene_biotype=protein_coding;locus_tag=NLI98_RS02875;old_locus_tag=NLI98_02875 NZ_CP100601.1 Protein Homology CDS 585795 586565 . + 0 ID=cds-WP_002917954.1;Parent=gene-NLI98_RS02875;Dbxref=Genbank:WP_002917954.1;Name=WP_002917954.1;Ontology_term=GO:0019394,GO:0008672;gbkey=CDS;gene=garL;go_function=2-dehydro-3-deoxyglucarate aldolase activity|0008672||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462162.1;locus_tag=NLI98_RS02875;product=2-dehydro-3-deoxyglucarate aldolase;protein_id=WP_002917954.1;transl_table=11 NZ_CP100601.1 RefSeq gene 586592 587482 . + . ID=gene-NLI98_RS02880;Name=garR;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=NLI98_RS02880;old_locus_tag=NLI98_02880 NZ_CP100601.1 Protein Homology CDS 586592 587482 . + 0 ID=cds-WP_002917952.1;Parent=gene-NLI98_RS02880;Dbxref=Genbank:WP_002917952.1;Name=WP_002917952.1;Ontology_term=GO:0046487,GO:0008679;gbkey=CDS;gene=garR;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=glyoxylate metabolic process|0046487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312030.2;locus_tag=NLI98_RS02880;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_002917952.1;transl_table=11 NZ_CP100601.1 RefSeq gene 587547 588692 . + . ID=gene-NLI98_RS02885;Name=garK;gbkey=Gene;gene=garK;gene_biotype=protein_coding;locus_tag=NLI98_RS02885;old_locus_tag=NLI98_02885 NZ_CP100601.1 Protein Homology CDS 587547 588692 . + 0 ID=cds-WP_088498268.1;Parent=gene-NLI98_RS02885;Dbxref=Genbank:WP_088498268.1;Name=WP_088498268.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;gene=garK;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228971.1;locus_tag=NLI98_RS02885;product=glycerate 2-kinase;protein_id=WP_088498268.1;transl_table=11 NZ_CP100601.1 RefSeq gene 588725 589107 . + . ID=gene-NLI98_RS02890;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=NLI98_RS02890;old_locus_tag=NLI98_02890 NZ_CP100601.1 cmsearch RNase_P_RNA 588725 589107 . + . ID=rna-NLI98_RS02890;Parent=gene-NLI98_RS02890;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS02890;product=RNase P RNA component class A NZ_CP100601.1 cmsearch exon 588725 589107 . + . ID=exon-NLI98_RS02890-1;Parent=rna-NLI98_RS02890;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS02890;product=RNase P RNA component class A NZ_CP100601.1 RefSeq gene 589453 589917 . - . ID=gene-NLI98_RS02895;Name=NLI98_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02895;old_locus_tag=NLI98_02895 NZ_CP100601.1 Protein Homology CDS 589453 589917 . - 0 ID=cds-WP_004150939.1;Parent=gene-NLI98_RS02895;Dbxref=Genbank:WP_004150939.1;Name=WP_004150939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228970.1;locus_tag=NLI98_RS02895;product=OB-fold putative lipoprotein;protein_id=WP_004150939.1;transl_table=11 NZ_CP100601.1 RefSeq gene 590225 590635 . + . ID=gene-NLI98_RS02900;Name=NLI98_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02900;old_locus_tag=NLI98_02900 NZ_CP100601.1 Protein Homology CDS 590225 590635 . + 0 ID=cds-WP_004149907.1;Parent=gene-NLI98_RS02900;Dbxref=Genbank:WP_004149907.1;Name=WP_004149907.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228968.1;locus_tag=NLI98_RS02900;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_004149907.1;transl_table=11 NZ_CP100601.1 RefSeq gene 590709 590876 . - . ID=gene-NLI98_RS02905;Name=NLI98_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02905;old_locus_tag=NLI98_02905 NZ_CP100601.1 Protein Homology CDS 590709 590876 . - 0 ID=cds-WP_002917926.1;Parent=gene-NLI98_RS02905;Dbxref=Genbank:WP_002917926.1;Name=WP_002917926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228967.1;locus_tag=NLI98_RS02905;product=hypothetical protein;protein_id=WP_002917926.1;transl_table=11 NZ_CP100601.1 RefSeq gene 590901 591602 . - . ID=gene-NLI98_RS02910;Name=NLI98_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02910;old_locus_tag=NLI98_02910 NZ_CP100601.1 Protein Homology CDS 590901 591602 . - 0 ID=cds-WP_002917925.1;Parent=gene-NLI98_RS02910;Dbxref=Genbank:WP_002917925.1;Name=WP_002917925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228966.1;locus_tag=NLI98_RS02910;product=pirin family protein;protein_id=WP_002917925.1;transl_table=11 NZ_CP100601.1 RefSeq gene 591707 592603 . + . ID=gene-NLI98_RS02915;Name=NLI98_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02915;old_locus_tag=NLI98_02915 NZ_CP100601.1 Protein Homology CDS 591707 592603 . + 0 ID=cds-WP_004144865.1;Parent=gene-NLI98_RS02915;Dbxref=Genbank:WP_004144865.1;Name=WP_004144865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228965.1;locus_tag=NLI98_RS02915;product=LysR family transcriptional regulator;protein_id=WP_004144865.1;transl_table=11 NZ_CP100601.1 RefSeq gene 592645 593013 . - . ID=gene-NLI98_RS02920;Name=NLI98_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02920;old_locus_tag=NLI98_02920 NZ_CP100601.1 Protein Homology CDS 592645 593013 . - 0 ID=cds-WP_002917923.1;Parent=gene-NLI98_RS02920;Dbxref=Genbank:WP_002917923.1;Name=WP_002917923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228964.1;locus_tag=NLI98_RS02920;product=DUF805 domain-containing protein;protein_id=WP_002917923.1;transl_table=11 NZ_CP100601.1 RefSeq gene 593140 594126 . - . ID=gene-NLI98_RS02925;Name=NLI98_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02925;old_locus_tag=NLI98_02925 NZ_CP100601.1 Protein Homology CDS 593140 594126 . - 0 ID=cds-WP_002917922.1;Parent=gene-NLI98_RS02925;Dbxref=Genbank:WP_002917922.1;Name=WP_002917922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228963.1;locus_tag=NLI98_RS02925;product=glutathione S-transferase family protein;protein_id=WP_002917922.1;transl_table=11 NZ_CP100601.1 RefSeq gene 594207 594599 . - . ID=gene-NLI98_RS02930;Name=NLI98_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02930;old_locus_tag=NLI98_02930 NZ_CP100601.1 Protein Homology CDS 594207 594599 . - 0 ID=cds-WP_002917920.1;Parent=gene-NLI98_RS02930;Dbxref=Genbank:WP_002917920.1;Name=WP_002917920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=NLI98_RS02930;product=DoxX family protein;protein_id=WP_002917920.1;transl_table=11 NZ_CP100601.1 RefSeq gene 594945 595241 . - . ID=gene-NLI98_RS02935;Name=NLI98_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02935;old_locus_tag=NLI98_02935 NZ_CP100601.1 Protein Homology CDS 594945 595241 . - 0 ID=cds-WP_002917918.1;Parent=gene-NLI98_RS02935;Dbxref=Genbank:WP_002917918.1;Name=WP_002917918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228961.1;locus_tag=NLI98_RS02935;product=YqjK-like family protein;protein_id=WP_002917918.1;transl_table=11 NZ_CP100601.1 RefSeq gene 595238 595636 . - . ID=gene-NLI98_RS02940;Name=NLI98_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02940;old_locus_tag=NLI98_02940 NZ_CP100601.1 Protein Homology CDS 595238 595636 . - 0 ID=cds-WP_002917917.1;Parent=gene-NLI98_RS02940;Dbxref=Genbank:WP_002917917.1;Name=WP_002917917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228960.1;locus_tag=NLI98_RS02940;product=phage holin family protein;protein_id=WP_002917917.1;transl_table=11 NZ_CP100601.1 RefSeq gene 595639 595944 . - . ID=gene-NLI98_RS02945;Name=NLI98_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02945;old_locus_tag=NLI98_02945 NZ_CP100601.1 Protein Homology CDS 595639 595944 . - 0 ID=cds-WP_002917916.1;Parent=gene-NLI98_RS02945;Dbxref=Genbank:WP_002917916.1;Name=WP_002917916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228959.1;locus_tag=NLI98_RS02945;product=YqjD family protein;protein_id=WP_002917916.1;transl_table=11 NZ_CP100601.1 RefSeq gene 595990 596358 . - . ID=gene-NLI98_RS02950;Name=NLI98_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02950;old_locus_tag=NLI98_02950 NZ_CP100601.1 Protein Homology CDS 595990 596358 . - 0 ID=cds-WP_004144860.1;Parent=gene-NLI98_RS02950;Dbxref=Genbank:WP_004144860.1;Name=WP_004144860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228958.1;locus_tag=NLI98_RS02950;product=DUF1090 domain-containing protein;protein_id=WP_004144860.1;transl_table=11 NZ_CP100601.1 RefSeq gene 596508 596885 . - . ID=gene-NLI98_RS02955;Name=mzrA;gbkey=Gene;gene=mzrA;gene_biotype=protein_coding;locus_tag=NLI98_RS02955;old_locus_tag=NLI98_02955 NZ_CP100601.1 Protein Homology CDS 596508 596885 . - 0 ID=cds-WP_072196900.1;Parent=gene-NLI98_RS02955;Dbxref=Genbank:WP_072196900.1;Name=WP_072196900.1;gbkey=CDS;gene=mzrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228957.1;locus_tag=NLI98_RS02955;product=EnvZ/OmpR regulon moderator MzrA;protein_id=WP_072196900.1;transl_table=11 NZ_CP100601.1 RefSeq gene 596894 597556 . - . ID=gene-NLI98_RS02960;Name=NLI98_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02960;old_locus_tag=NLI98_02960 NZ_CP100601.1 Protein Homology CDS 596894 597556 . - 0 ID=cds-WP_002917909.1;Parent=gene-NLI98_RS02960;Dbxref=Genbank:WP_002917909.1;Name=WP_002917909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228956.1;locus_tag=NLI98_RS02960;product=DedA family protein;protein_id=WP_002917909.1;transl_table=11 NZ_CP100601.1 RefSeq gene 597897 598673 . - . ID=gene-NLI98_RS02965;Name=exuR;gbkey=Gene;gene=exuR;gene_biotype=protein_coding;locus_tag=NLI98_RS02965;old_locus_tag=NLI98_02965 NZ_CP100601.1 Protein Homology CDS 597897 598673 . - 0 ID=cds-WP_002917907.1;Parent=gene-NLI98_RS02965;Dbxref=Genbank:WP_002917907.1;Name=WP_002917907.1;gbkey=CDS;gene=exuR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228955.1;locus_tag=NLI98_RS02965;product=transcriptional regulator ExuR;protein_id=WP_002917907.1;transl_table=11 NZ_CP100601.1 RefSeq gene 598801 600102 . - . ID=gene-NLI98_RS02970;Name=NLI98_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02970;old_locus_tag=NLI98_02970 NZ_CP100601.1 Protein Homology CDS 598801 600102 . - 0 ID=cds-WP_088498269.1;Parent=gene-NLI98_RS02970;Dbxref=Genbank:WP_088498269.1;Name=WP_088498269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228954.1;locus_tag=NLI98_RS02970;product=MFS transporter;protein_id=WP_088498269.1;transl_table=11 NZ_CP100601.1 RefSeq gene 600583 601995 . + . ID=gene-NLI98_RS02975;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=NLI98_RS02975;old_locus_tag=NLI98_02975 NZ_CP100601.1 Protein Homology CDS 600583 601995 . + 0 ID=cds-WP_002917899.1;Parent=gene-NLI98_RS02975;Dbxref=Genbank:WP_002917899.1;Name=WP_002917899.1;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077755.1;locus_tag=NLI98_RS02975;product=glucuronate isomerase;protein_id=WP_002917899.1;transl_table=11 NZ_CP100601.1 RefSeq gene 602014 603501 . + . ID=gene-NLI98_RS02980;Name=NLI98_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02980;old_locus_tag=NLI98_02980 NZ_CP100601.1 Protein Homology CDS 602014 603501 . + 0 ID=cds-WP_002917898.1;Parent=gene-NLI98_RS02980;Dbxref=Genbank:WP_002917898.1;Name=WP_002917898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199350.1;locus_tag=NLI98_RS02980;product=altronate dehydratase family protein;protein_id=WP_002917898.1;transl_table=11 NZ_CP100601.1 RefSeq gene 603631 604185 . + . ID=gene-NLI98_RS02985;Name=NLI98_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02985;old_locus_tag=NLI98_02985 NZ_CP100601.1 Protein Homology CDS 603631 604185 . + 0 ID=cds-WP_002917897.1;Parent=gene-NLI98_RS02985;Dbxref=Genbank:WP_002917897.1;Name=WP_002917897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228951.1;locus_tag=NLI98_RS02985;product=YgjV family protein;protein_id=WP_002917897.1;transl_table=11 NZ_CP100601.1 RefSeq gene 604201 605448 . - . ID=gene-NLI98_RS02990;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=NLI98_RS02990;old_locus_tag=NLI98_02990 NZ_CP100601.1 Protein Homology CDS 604201 605448 . - 0 ID=cds-WP_002917895.1;Parent=gene-NLI98_RS02990;Dbxref=Genbank:WP_002917895.1;Name=WP_002917895.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228950.1;locus_tag=NLI98_RS02990;product=serine/threonine transporter SstT;protein_id=WP_002917895.1;transl_table=11 NZ_CP100601.1 RefSeq gene 605715 606686 . - . ID=gene-NLI98_RS02995;Name=NLI98_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS02995;old_locus_tag=NLI98_02995 NZ_CP100601.1 Protein Homology CDS 605715 606686 . - 0 ID=cds-WP_004185787.1;Parent=gene-NLI98_RS02995;Dbxref=Genbank:WP_004185787.1;Name=WP_004185787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228949.1;locus_tag=NLI98_RS02995;product=TerC family protein;protein_id=WP_004185787.1;transl_table=11 NZ_CP100601.1 RefSeq gene 606958 607947 . - . ID=gene-NLI98_RS03000;Name=NLI98_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03000;old_locus_tag=NLI98_03000 NZ_CP100601.1 Protein Homology CDS 606958 607947 . - 0 ID=cds-WP_004149902.1;Parent=gene-NLI98_RS03000;Dbxref=Genbank:WP_004149902.1;Name=WP_004149902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228948.1;locus_tag=NLI98_RS03000;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_004149902.1;transl_table=11 NZ_CP100601.1 RefSeq gene 608021 608521 . - . ID=gene-NLI98_RS03005;Name=NLI98_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03005;old_locus_tag=NLI98_03005 NZ_CP100601.1 Protein Homology CDS 608021 608521 . - 0 ID=cds-WP_004144843.1;Parent=gene-NLI98_RS03005;Dbxref=Genbank:WP_004144843.1;Name=WP_004144843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228947.1;locus_tag=NLI98_RS03005;product=M48 family metallopeptidase;protein_id=WP_004144843.1;transl_table=11 NZ_CP100601.1 RefSeq gene 608541 609143 . - . ID=gene-NLI98_RS03010;Name=NLI98_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03010;old_locus_tag=NLI98_03010 NZ_CP100601.1 Protein Homology CDS 608541 609143 . - 0 ID=cds-WP_004144842.1;Parent=gene-NLI98_RS03010;Dbxref=Genbank:WP_004144842.1;Name=WP_004144842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228946.1;locus_tag=NLI98_RS03010;product=XRE family transcriptional regulator;protein_id=WP_004144842.1;transl_table=11 NZ_CP100601.1 RefSeq gene 609187 609894 . + . ID=gene-NLI98_RS03015;Name=NLI98_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03015;old_locus_tag=NLI98_03015 NZ_CP100601.1 Protein Homology CDS 609187 609894 . + 0 ID=cds-WP_002917889.1;Parent=gene-NLI98_RS03015;Dbxref=Genbank:WP_002917889.1;Name=WP_002917889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228945.1;locus_tag=NLI98_RS03015;product=B3/4 domain-containing protein;protein_id=WP_002917889.1;transl_table=11 NZ_CP100601.1 RefSeq gene 609980 611110 . + . ID=gene-NLI98_RS03020;Name=rlmG;gbkey=Gene;gene=rlmG;gene_biotype=protein_coding;locus_tag=NLI98_RS03020;old_locus_tag=NLI98_03020 NZ_CP100601.1 Protein Homology CDS 609980 611110 . + 0 ID=cds-WP_002917887.1;Parent=gene-NLI98_RS03020;Dbxref=Genbank:WP_002917887.1;Name=WP_002917887.1;Ontology_term=GO:0031167,GO:0003676,GO:0008990;gbkey=CDS;gene=rlmG;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228944.1;locus_tag=NLI98_RS03020;product=23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG;protein_id=WP_002917887.1;transl_table=11 NZ_CP100601.1 RefSeq gene 611219 613240 . - . ID=gene-NLI98_RS03025;Name=NLI98_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03025;old_locus_tag=NLI98_03025 NZ_CP100601.1 Protein Homology CDS 611219 613240 . - 0 ID=cds-WP_004181395.1;Parent=gene-NLI98_RS03025;Dbxref=Genbank:WP_004181395.1;Name=WP_004181395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228943.1;locus_tag=NLI98_RS03025;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_004181395.1;transl_table=11 NZ_CP100601.1 RefSeq gene 613424 615022 . - . ID=gene-NLI98_RS03030;Name=lsrK;gbkey=Gene;gene=lsrK;gene_biotype=protein_coding;locus_tag=NLI98_RS03030;old_locus_tag=NLI98_03030 NZ_CP100601.1 Protein Homology CDS 613424 615022 . - 0 ID=cds-WP_004149900.1;Parent=gene-NLI98_RS03030;Dbxref=Genbank:WP_004149900.1;Name=WP_004149900.1;Ontology_term=GO:0005975,GO:0009372,GO:0071518;gbkey=CDS;gene=lsrK;go_function=autoinducer-2 kinase activity|0071518||IEA;go_process=carbohydrate metabolic process|0005975||IEA,quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228942.1;locus_tag=NLI98_RS03030;product=autoinducer-2 kinase;protein_id=WP_004149900.1;transl_table=11 NZ_CP100601.1 RefSeq gene 615060 616031 . - . ID=gene-NLI98_RS03035;Name=lsrR;gbkey=Gene;gene=lsrR;gene_biotype=protein_coding;locus_tag=NLI98_RS03035;old_locus_tag=NLI98_03035 NZ_CP100601.1 Protein Homology CDS 615060 616031 . - 0 ID=cds-WP_004144837.1;Parent=gene-NLI98_RS03035;Dbxref=Genbank:WP_004144837.1;Name=WP_004144837.1;gbkey=CDS;gene=lsrR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228941.1;locus_tag=NLI98_RS03035;product=transcriptional regulator LsrR;protein_id=WP_004144837.1;transl_table=11 NZ_CP100601.1 RefSeq gene 616250 617737 . + . ID=gene-NLI98_RS03040;Name=lsrA;gbkey=Gene;gene=lsrA;gene_biotype=protein_coding;locus_tag=NLI98_RS03040;old_locus_tag=NLI98_03040 NZ_CP100601.1 Protein Homology CDS 616250 617737 . + 0 ID=cds-WP_004889660.1;Parent=gene-NLI98_RS03040;Dbxref=Genbank:WP_004889660.1;Name=WP_004889660.1;Ontology_term=GO:1905887,GO:0005524,GO:0042626,GO:0016020;gbkey=CDS;gene=lsrA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228940.1;locus_tag=NLI98_RS03040;product=autoinducer 2 ABC transporter ATP-binding protein LsrA;protein_id=WP_004889660.1;transl_table=11 NZ_CP100601.1 RefSeq gene 617734 618768 . + . ID=gene-NLI98_RS03045;Name=lsrC;gbkey=Gene;gene=lsrC;gene_biotype=protein_coding;locus_tag=NLI98_RS03045;old_locus_tag=NLI98_03045 NZ_CP100601.1 Protein Homology CDS 617734 618768 . + 0 ID=cds-WP_004174225.1;Parent=gene-NLI98_RS03045;Dbxref=Genbank:WP_004174225.1;Name=WP_004174225.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lsrC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228939.1;locus_tag=NLI98_RS03045;product=autoinducer 2 ABC transporter permease LsrC;protein_id=WP_004174225.1;transl_table=11 NZ_CP100601.1 RefSeq gene 618769 619767 . + . ID=gene-NLI98_RS03050;Name=NLI98_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03050;old_locus_tag=NLI98_03050 NZ_CP100601.1 Protein Homology CDS 618769 619767 . + 0 ID=cds-WP_002917727.1;Parent=gene-NLI98_RS03050;Dbxref=Genbank:WP_002917727.1;Name=WP_002917727.1;Note=with IsrABC is involved with autoinducer 2 import;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228938.1;locus_tag=NLI98_RS03050;product=histidine kinase;protein_id=WP_002917727.1;transl_table=11 NZ_CP100601.1 RefSeq gene 619769 620770 . + . ID=gene-NLI98_RS03055;Name=lsrB;gbkey=Gene;gene=lsrB;gene_biotype=protein_coding;locus_tag=NLI98_RS03055;old_locus_tag=NLI98_03055 NZ_CP100601.1 Protein Homology CDS 619769 620770 . + 0 ID=cds-WP_002917725.1;Parent=gene-NLI98_RS03055;Dbxref=Genbank:WP_002917725.1;Name=WP_002917725.1;gbkey=CDS;gene=lsrB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228937.1;locus_tag=NLI98_RS03055;product=autoinducer 2 ABC transporter substrate-binding protein LsrB;protein_id=WP_002917725.1;transl_table=11 NZ_CP100601.1 RefSeq gene 620782 621669 . + . ID=gene-NLI98_RS03060;Name=lsrF;gbkey=Gene;gene=lsrF;gene_biotype=protein_coding;locus_tag=NLI98_RS03060;old_locus_tag=NLI98_03060 NZ_CP100601.1 Protein Homology CDS 620782 621669 . + 0 ID=cds-WP_002917724.1;Parent=gene-NLI98_RS03060;Dbxref=Genbank:WP_002917724.1;Name=WP_002917724.1;Ontology_term=GO:0016829;gbkey=CDS;gene=lsrF;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228936.1;locus_tag=NLI98_RS03060;product=3-hydroxy-5-phosphonooxypentane-2%2C4-dione thiolase;protein_id=WP_002917724.1;transl_table=11 NZ_CP100601.1 RefSeq gene 621666 621962 . + . ID=gene-NLI98_RS03065;Name=lsrG;gbkey=Gene;gene=lsrG;gene_biotype=protein_coding;locus_tag=NLI98_RS03065;old_locus_tag=NLI98_03065 NZ_CP100601.1 Protein Homology CDS 621666 621962 . + 0 ID=cds-WP_004181386.1;Parent=gene-NLI98_RS03065;Dbxref=Genbank:WP_004181386.1;Name=WP_004181386.1;gbkey=CDS;gene=lsrG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228935.1;locus_tag=NLI98_RS03065;product=(4S)-4-hydroxy-5-phosphonooxypentane-2%2C3-dione isomerase;protein_id=WP_004181386.1;transl_table=11 NZ_CP100601.1 RefSeq gene 622009 624360 . - . ID=gene-NLI98_RS03070;Name=ygjK;gbkey=Gene;gene=ygjK;gene_biotype=protein_coding;locus_tag=NLI98_RS03070;old_locus_tag=NLI98_03070 NZ_CP100601.1 Protein Homology CDS 622009 624360 . - 0 ID=cds-WP_048288888.1;Parent=gene-NLI98_RS03070;Dbxref=Genbank:WP_048288888.1;Name=WP_048288888.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;gene=ygjK;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016808026.1;locus_tag=NLI98_RS03070;product=alpha-glucosidase;protein_id=WP_048288888.1;transl_table=11 NZ_CP100601.1 RefSeq gene 624378 625436 . - . ID=gene-NLI98_RS03075;Name=NLI98_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03075;old_locus_tag=NLI98_03075 NZ_CP100601.1 Protein Homology CDS 624378 625436 . - 0 ID=cds-WP_088498272.1;Parent=gene-NLI98_RS03075;Dbxref=Genbank:WP_088498272.1;Name=WP_088498272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004900787.1;locus_tag=NLI98_RS03075;product=hypothetical protein;protein_id=WP_088498272.1;transl_table=11 NZ_CP100601.1 RefSeq gene 625450 626883 . - . ID=gene-NLI98_RS03080;Name=NLI98_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03080;old_locus_tag=NLI98_03080 NZ_CP100601.1 Protein Homology CDS 625450 626883 . - 0 ID=cds-WP_015369594.1;Parent=gene-NLI98_RS03080;Dbxref=Genbank:WP_015369594.1;Name=WP_015369594.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016151017.1;locus_tag=NLI98_RS03080;product=amino acid permease;protein_id=WP_015369594.1;transl_table=11 NZ_CP100601.1 RefSeq gene 627113 628546 . - . ID=gene-NLI98_RS03085;Name=NLI98_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03085;old_locus_tag=NLI98_03085 NZ_CP100601.1 Protein Homology CDS 627113 628546 . - 0 ID=cds-WP_049000111.1;Parent=gene-NLI98_RS03085;Dbxref=Genbank:WP_049000111.1;Name=WP_049000111.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009485171.1;locus_tag=NLI98_RS03085;product=amino acid permease;protein_id=WP_049000111.1;transl_table=11 NZ_CP100601.1 RefSeq gene 628641 629090 . - . ID=gene-NLI98_RS03090;Name=NLI98_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03090;old_locus_tag=NLI98_03090 NZ_CP100601.1 Protein Homology CDS 628641 629090 . - 0 ID=cds-WP_004900777.1;Parent=gene-NLI98_RS03090;Dbxref=Genbank:WP_004900777.1;Name=WP_004900777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417548.1;locus_tag=NLI98_RS03090;product=beta-galactosidase subunit beta;protein_id=WP_004900777.1;transl_table=11 NZ_CP100601.1 RefSeq gene 629087 632179 . - . ID=gene-NLI98_RS03095;Name=ebgA;gbkey=Gene;gene=ebgA;gene_biotype=protein_coding;locus_tag=NLI98_RS03095;old_locus_tag=NLI98_03095 NZ_CP100601.1 Protein Homology CDS 629087 632179 . - 0 ID=cds-WP_088498273.1;Parent=gene-NLI98_RS03095;Dbxref=Genbank:WP_088498273.1;Name=WP_088498273.1;Ontology_term=GO:0004565;gbkey=CDS;gene=ebgA;go_function=beta-galactosidase activity|0004565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026199.1;locus_tag=NLI98_RS03095;product=beta-galactosidase subunit alpha;protein_id=WP_088498273.1;transl_table=11 NZ_CP100601.1 RefSeq gene 632388 633371 . - . ID=gene-NLI98_RS03100;Name=ebgR;gbkey=Gene;gene=ebgR;gene_biotype=protein_coding;locus_tag=NLI98_RS03100;old_locus_tag=NLI98_03100 NZ_CP100601.1 Protein Homology CDS 632388 633371 . - 0 ID=cds-WP_004900771.1;Parent=gene-NLI98_RS03100;Dbxref=Genbank:WP_004900771.1;Name=WP_004900771.1;gbkey=CDS;gene=ebgR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708881.2;locus_tag=NLI98_RS03100;product=transcriptional regulator EbgR;protein_id=WP_004900771.1;transl_table=11 NZ_CP100601.1 RefSeq gene 633579 633911 . + . ID=gene-NLI98_RS03105;Name=NLI98_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03105;old_locus_tag=NLI98_03105 NZ_CP100601.1 Protein Homology CDS 633579 633911 . + 0 ID=cds-WP_020317110.1;Parent=gene-NLI98_RS03105;Dbxref=Genbank:WP_020317110.1;Name=WP_020317110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417545.1;locus_tag=NLI98_RS03105;product=tRNA-binding protein;protein_id=WP_020317110.1;transl_table=11 NZ_CP100601.1 RefSeq gene 633954 635333 . - . ID=gene-NLI98_RS03110;Name=ygjG;gbkey=Gene;gene=ygjG;gene_biotype=protein_coding;locus_tag=NLI98_RS03110;old_locus_tag=NLI98_03110 NZ_CP100601.1 Protein Homology CDS 633954 635333 . - 0 ID=cds-WP_025710575.1;Parent=gene-NLI98_RS03110;Dbxref=Genbank:WP_025710575.1;Name=WP_025710575.1;Ontology_term=GO:0009447,GO:0033094;gbkey=CDS;gene=ygjG;go_function=butane-1%2C4-diamine:2-oxoglutarate aminotransferase activity|0033094||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004900767.1;locus_tag=NLI98_RS03110;product=putrescine aminotransferase;protein_id=WP_025710575.1;transl_table=11 NZ_CP100601.1 RefSeq gene 635591 636145 . - . ID=gene-NLI98_RS03115;Name=NLI98_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03115;old_locus_tag=NLI98_03115 NZ_CP100601.1 Protein Homology CDS 635591 636145 . - 0 ID=cds-WP_004181384.1;Parent=gene-NLI98_RS03115;Dbxref=Genbank:WP_004181384.1;Name=WP_004181384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228933.1;locus_tag=NLI98_RS03115;product=PadR family transcriptional regulator;protein_id=WP_004181384.1;transl_table=11 NZ_CP100601.1 RefSeq gene 636383 637159 . + . ID=gene-NLI98_RS03120;Name=NLI98_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03120;old_locus_tag=NLI98_03120 NZ_CP100601.1 Protein Homology CDS 636383 637159 . + 0 ID=cds-WP_004144829.1;Parent=gene-NLI98_RS03120;Dbxref=Genbank:WP_004144829.1;Name=WP_004144829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228931.1;locus_tag=NLI98_RS03120;product=siderophore-interacting protein;protein_id=WP_004144829.1;transl_table=11 NZ_CP100601.1 RefSeq gene 637315 638964 . - . ID=gene-NLI98_RS03125;Name=NLI98_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03125;old_locus_tag=NLI98_03125 NZ_CP100601.1 Protein Homology CDS 637315 638964 . - 0 ID=cds-WP_004181382.1;Parent=gene-NLI98_RS03125;Dbxref=Genbank:WP_004181382.1;Name=WP_004181382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228930.1;locus_tag=NLI98_RS03125;product=glycerone kinase;protein_id=WP_004181382.1;transl_table=11 NZ_CP100601.1 RefSeq gene 639040 640461 . - . ID=gene-NLI98_RS03130;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=NLI98_RS03130;old_locus_tag=NLI98_03130 NZ_CP100601.1 Protein Homology CDS 639040 640461 . - 0 ID=cds-WP_004181380.1;Parent=gene-NLI98_RS03130;Dbxref=Genbank:WP_004181380.1;Name=WP_004181380.1;Ontology_term=GO:0009401,GO:0016310,GO:0019563,GO:0047324,GO:0016020;gbkey=CDS;gene=dhaM;go_component=membrane|0016020||IEA;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,glycerol catabolic process|0019563||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228929.1;locus_tag=NLI98_RS03130;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_004181380.1;transl_table=11 NZ_CP100601.1 RefSeq gene 640472 641104 . - . ID=gene-NLI98_RS03135;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=NLI98_RS03135;old_locus_tag=NLI98_03135 NZ_CP100601.1 Protein Homology CDS 640472 641104 . - 0 ID=cds-WP_004181378.1;Parent=gene-NLI98_RS03135;Dbxref=Genbank:WP_004181378.1;Name=WP_004181378.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaL;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228928.1;locus_tag=NLI98_RS03135;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_004181378.1;transl_table=11 NZ_CP100601.1 RefSeq gene 641115 642185 . - . ID=gene-NLI98_RS03140;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=NLI98_RS03140;old_locus_tag=NLI98_03140 NZ_CP100601.1 Protein Homology CDS 641115 642185 . - 0 ID=cds-WP_002917682.1;Parent=gene-NLI98_RS03140;Dbxref=Genbank:WP_002917682.1;Name=WP_002917682.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228927.1;locus_tag=NLI98_RS03140;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_002917682.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 642341 642526 . - . ID=gene-NLI98_RS03145;Name=NLI98_RS03145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS03145;old_locus_tag=NLI98_03145;pseudo=true NZ_CP100601.1 Protein Homology CDS 642341 642526 . - 0 ID=cds-NLI98_RS03145;Parent=gene-NLI98_RS03145;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228926.1;locus_tag=NLI98_RS03145;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 642796 643893 . + . ID=gene-NLI98_RS03150;Name=NLI98_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03150;old_locus_tag=NLI98_03150 NZ_CP100601.1 Protein Homology CDS 642796 643893 . + 0 ID=cds-WP_002917681.1;Parent=gene-NLI98_RS03150;Dbxref=Genbank:WP_002917681.1;Name=WP_002917681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228925.1;locus_tag=NLI98_RS03150;product=glycerol dehydrogenase;protein_id=WP_002917681.1;transl_table=11 NZ_CP100601.1 RefSeq gene 643995 645920 . + . ID=gene-NLI98_RS03155;Name=dhaR;gbkey=Gene;gene=dhaR;gene_biotype=protein_coding;locus_tag=NLI98_RS03155;old_locus_tag=NLI98_03155 NZ_CP100601.1 Protein Homology CDS 643995 645920 . + 0 ID=cds-WP_002917680.1;Parent=gene-NLI98_RS03155;Dbxref=Genbank:WP_002917680.1;Name=WP_002917680.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=dhaR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228924.1;locus_tag=NLI98_RS03155;product=dihydroxyacetone kinase operon transcriptional regulator DhaR;protein_id=WP_002917680.1;transl_table=11 NZ_CP100601.1 RefSeq gene 645898 646428 . - . ID=gene-NLI98_RS03160;Name=NLI98_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03160;old_locus_tag=NLI98_03160 NZ_CP100601.1 Protein Homology CDS 645898 646428 . - 0 ID=cds-WP_002917679.1;Parent=gene-NLI98_RS03160;Dbxref=Genbank:WP_002917679.1;Name=WP_002917679.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228923.1;locus_tag=NLI98_RS03160;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_002917679.1;transl_table=11 NZ_CP100601.1 RefSeq gene 646429 646782 . - . ID=gene-NLI98_RS03165;Name=NLI98_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03165;old_locus_tag=NLI98_03165 NZ_CP100601.1 Protein Homology CDS 646429 646782 . - 0 ID=cds-WP_002917678.1;Parent=gene-NLI98_RS03165;Dbxref=Genbank:WP_002917678.1;Name=WP_002917678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228922.1;locus_tag=NLI98_RS03165;product=glycerol dehydratase reactivase beta/small subunit family protein;protein_id=WP_002917678.1;transl_table=11 NZ_CP100601.1 RefSeq gene 646803 647966 . - . ID=gene-NLI98_RS03170;Name=dhaT;gbkey=Gene;gene=dhaT;gene_biotype=protein_coding;locus_tag=NLI98_RS03170;old_locus_tag=NLI98_03170 NZ_CP100601.1 Protein Homology CDS 646803 647966 . - 0 ID=cds-WP_004150927.1;Parent=gene-NLI98_RS03170;Dbxref=Genbank:WP_004150927.1;Name=WP_004150927.1;gbkey=CDS;gene=dhaT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228921.1;locus_tag=NLI98_RS03170;product=1%2C3-propanediol dehydrogenase;protein_id=WP_004150927.1;transl_table=11 NZ_CP100601.1 RefSeq gene 647988 648416 . - . ID=gene-NLI98_RS03175;Name=NLI98_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03175;old_locus_tag=NLI98_03175 NZ_CP100601.1 Protein Homology CDS 647988 648416 . - 0 ID=cds-WP_004181373.1;Parent=gene-NLI98_RS03175;Dbxref=Genbank:WP_004181373.1;Name=WP_004181373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014599267.1;locus_tag=NLI98_RS03175;product=heme-binding protein;protein_id=WP_004181373.1;transl_table=11 NZ_CP100601.1 RefSeq gene 648830 650497 . + . ID=gene-NLI98_RS03180;Name=NLI98_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03180;old_locus_tag=NLI98_03180 NZ_CP100601.1 Protein Homology CDS 648830 650497 . + 0 ID=cds-WP_002917676.1;Parent=gene-NLI98_RS03180;Dbxref=Genbank:WP_002917676.1;Name=WP_002917676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228919.1;locus_tag=NLI98_RS03180;product=propanediol/glycerol family dehydratase large subunit;protein_id=WP_002917676.1;transl_table=11 NZ_CP100601.1 RefSeq gene 650510 651094 . + . ID=gene-NLI98_RS03185;Name=NLI98_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03185;old_locus_tag=NLI98_03185 NZ_CP100601.1 Protein Homology CDS 650510 651094 . + 0 ID=cds-WP_002917672.1;Parent=gene-NLI98_RS03185;Dbxref=Genbank:WP_002917672.1;Name=WP_002917672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228918.1;locus_tag=NLI98_RS03185;product=propanediol/glycerol family dehydratase medium subunit;protein_id=WP_002917672.1;transl_table=11 NZ_CP100601.1 RefSeq gene 651097 651522 . + . ID=gene-NLI98_RS03190;Name=NLI98_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03190;old_locus_tag=NLI98_03190 NZ_CP100601.1 Protein Homology CDS 651097 651522 . + 0 ID=cds-WP_002917670.1;Parent=gene-NLI98_RS03190;Dbxref=Genbank:WP_002917670.1;Name=WP_002917670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228917.1;locus_tag=NLI98_RS03190;product=glycerol dehydratase small subunit DhaB3;protein_id=WP_002917670.1;transl_table=11 NZ_CP100601.1 RefSeq gene 651535 653358 . + . ID=gene-NLI98_RS03195;Name=NLI98_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03195;old_locus_tag=NLI98_03195 NZ_CP100601.1 Protein Homology CDS 651535 653358 . + 0 ID=cds-WP_004181370.1;Parent=gene-NLI98_RS03195;Dbxref=Genbank:WP_004181370.1;Name=WP_004181370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228916.1;locus_tag=NLI98_RS03195;product=diol dehydratase reactivase subunit alpha;protein_id=WP_004181370.1;transl_table=11 NZ_CP100601.1 RefSeq gene 653412 654215 . + . ID=gene-NLI98_RS03200;Name=NLI98_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03200;old_locus_tag=NLI98_03200 NZ_CP100601.1 Protein Homology CDS 653412 654215 . + 0 ID=cds-WP_002917658.1;Parent=gene-NLI98_RS03200;Dbxref=Genbank:WP_002917658.1;Name=WP_002917658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228915.1;locus_tag=NLI98_RS03200;product=aquaporin;protein_id=WP_002917658.1;transl_table=11 NZ_CP100601.1 RefSeq gene 654268 654573 . - . ID=gene-NLI98_RS03205;Name=hdeB;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=NLI98_RS03205;old_locus_tag=NLI98_03205 NZ_CP100601.1 Protein Homology CDS 654268 654573 . - 0 ID=cds-WP_002917655.1;Parent=gene-NLI98_RS03205;Dbxref=Genbank:WP_002917655.1;Name=WP_002917655.1;gbkey=CDS;gene=hdeB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228914.1;locus_tag=NLI98_RS03205;product=acid-activated periplasmic chaperone HdeB;protein_id=WP_002917655.1;transl_table=11 NZ_CP100601.1 RefSeq gene 654600 655175 . - . ID=gene-NLI98_RS03210;Name=NLI98_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03210;old_locus_tag=NLI98_03210 NZ_CP100601.1 Protein Homology CDS 654600 655175 . - 0 ID=cds-WP_002917651.1;Parent=gene-NLI98_RS03210;Dbxref=Genbank:WP_002917651.1;Name=WP_002917651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228913.1;locus_tag=NLI98_RS03210;product=HdeD family acid-resistance protein;protein_id=WP_002917651.1;transl_table=11 NZ_CP100601.1 RefSeq gene 655416 656078 . + . ID=gene-NLI98_RS03215;Name=NLI98_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03215;old_locus_tag=NLI98_03215 NZ_CP100601.1 Protein Homology CDS 655416 656078 . + 0 ID=cds-WP_004144810.1;Parent=gene-NLI98_RS03215;Dbxref=Genbank:WP_004144810.1;Name=WP_004144810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228912.1;locus_tag=NLI98_RS03215;product=YfdX family protein;protein_id=WP_004144810.1;transl_table=11 NZ_CP100601.1 RefSeq gene 656169 659411 . - . ID=gene-NLI98_RS03220;Name=NLI98_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03220;old_locus_tag=NLI98_03220 NZ_CP100601.1 Protein Homology CDS 656169 659411 . - 0 ID=cds-WP_004181365.1;Parent=gene-NLI98_RS03220;Dbxref=Genbank:WP_004181365.1;Name=WP_004181365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228911.1;locus_tag=NLI98_RS03220;product=transporter substrate-binding domain-containing protein;protein_id=WP_004181365.1;transl_table=11 NZ_CP100601.1 RefSeq gene 659416 660030 . - . ID=gene-NLI98_RS03225;Name=evgA;gbkey=Gene;gene=evgA;gene_biotype=protein_coding;locus_tag=NLI98_RS03225;old_locus_tag=NLI98_03225 NZ_CP100601.1 Protein Homology CDS 659416 660030 . - 0 ID=cds-WP_004174237.1;Parent=gene-NLI98_RS03225;Dbxref=Genbank:WP_004174237.1;Name=WP_004174237.1;gbkey=CDS;gene=evgA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228910.1;locus_tag=NLI98_RS03225;product=acid-sensing system DNA-binding response regulator EvgA;protein_id=WP_004174237.1;transl_table=11 NZ_CP100601.1 RefSeq gene 660332 660697 . + . ID=gene-NLI98_RS03230;Name=NLI98_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03230;old_locus_tag=NLI98_03230 NZ_CP100601.1 Protein Homology CDS 660332 660697 . + 0 ID=cds-WP_072157854.1;Parent=gene-NLI98_RS03230;Dbxref=Genbank:WP_072157854.1;Name=WP_072157854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228909.1;locus_tag=NLI98_RS03230;product=HdeA/HdeB family chaperone;protein_id=WP_072157854.1;transl_table=11 NZ_CP100601.1 RefSeq gene 660766 661038 . - . ID=gene-NLI98_RS03235;Name=NLI98_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03235;old_locus_tag=NLI98_03235 NZ_CP100601.1 Protein Homology CDS 660766 661038 . - 0 ID=cds-WP_004181362.1;Parent=gene-NLI98_RS03235;Dbxref=Genbank:WP_004181362.1;Name=WP_004181362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228908.1;locus_tag=NLI98_RS03235;product=hypothetical protein;protein_id=WP_004181362.1;transl_table=11 NZ_CP100601.1 RefSeq gene 661574 661649 . - . ID=gene-NLI98_RS03240;Name=NLI98_RS03240;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS03240;old_locus_tag=NLI98_03240 NZ_CP100601.1 tRNAscan-SE tRNA 661574 661649 . - . ID=rna-NLI98_RS03240;Parent=gene-NLI98_RS03240;anticodon=(pos:complement(661614..661616));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS03240;product=tRNA-Ile NZ_CP100601.1 tRNAscan-SE exon 661574 661649 . - . ID=exon-NLI98_RS03240-1;Parent=rna-NLI98_RS03240;anticodon=(pos:complement(661614..661616));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS03240;product=tRNA-Ile NZ_CP100601.1 RefSeq gene 661774 662280 . + . ID=gene-NLI98_RS03245;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=NLI98_RS03245;old_locus_tag=NLI98_03245 NZ_CP100601.1 Protein Homology CDS 661774 662280 . + 0 ID=cds-WP_002917636.1;Parent=gene-NLI98_RS03245;Dbxref=Genbank:WP_002917636.1;Name=WP_002917636.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228907.1;locus_tag=NLI98_RS03245;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_002917636.1;transl_table=11 NZ_CP100601.1 RefSeq gene 662380 664221 . - . ID=gene-NLI98_RS03250;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=NLI98_RS03250;old_locus_tag=NLI98_03250 NZ_CP100601.1 Protein Homology CDS 662380 664221 . - 0 ID=cds-WP_004174339.1;Parent=gene-NLI98_RS03250;Dbxref=Genbank:WP_004174339.1;Name=WP_004174339.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228906.1;locus_tag=NLI98_RS03250;product=RNA polymerase sigma factor RpoD;protein_id=WP_004174339.1;transl_table=11 NZ_CP100601.1 RefSeq gene 664440 666185 . - . ID=gene-NLI98_RS03255;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=NLI98_RS03255;old_locus_tag=NLI98_03255 NZ_CP100601.1 Protein Homology CDS 664440 666185 . - 0 ID=cds-WP_004149864.1;Parent=gene-NLI98_RS03255;Dbxref=Genbank:WP_004149864.1;Name=WP_004149864.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228905.1;locus_tag=NLI98_RS03255;product=DNA primase;protein_id=WP_004149864.1;transl_table=11 NZ_CP100601.1 RefSeq gene 666297 666512 . - . ID=gene-NLI98_RS03260;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=NLI98_RS03260;old_locus_tag=NLI98_03260 NZ_CP100601.1 Protein Homology CDS 666297 666512 . - 0 ID=cds-WP_001144069.1;Parent=gene-NLI98_RS03260;Dbxref=Genbank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311975.1;locus_tag=NLI98_RS03260;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_CP100601.1 RefSeq gene 666750 667763 . + . ID=gene-NLI98_RS03265;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=NLI98_RS03265;old_locus_tag=NLI98_03265 NZ_CP100601.1 Protein Homology CDS 666750 667763 . + 0 ID=cds-WP_004900709.1;Parent=gene-NLI98_RS03265;Dbxref=Genbank:WP_004900709.1;Name=WP_004900709.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001264383.1;locus_tag=NLI98_RS03265;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_004900709.1;transl_table=11 NZ_CP100601.1 RefSeq gene 667808 669415 . - . ID=gene-NLI98_RS03270;Name=NLI98_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03270;old_locus_tag=NLI98_03270 NZ_CP100601.1 Protein Homology CDS 667808 669415 . - 0 ID=cds-WP_004181356.1;Parent=gene-NLI98_RS03270;Dbxref=Genbank:WP_004181356.1;Name=WP_004181356.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228902.1;locus_tag=NLI98_RS03270;product=cytosine permease;protein_id=WP_004181356.1;transl_table=11 NZ_CP100601.1 RefSeq gene 669569 670186 . - . ID=gene-NLI98_RS03275;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=NLI98_RS03275;old_locus_tag=NLI98_03275 NZ_CP100601.1 Protein Homology CDS 669569 670186 . - 0 ID=cds-WP_002916877.1;Parent=gene-NLI98_RS03275;Dbxref=Genbank:WP_002916877.1;Name=WP_002916877.1;Ontology_term=GO:0019627,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228901.1;locus_tag=NLI98_RS03275;product=urease accessory protein UreG;protein_id=WP_002916877.1;transl_table=11 NZ_CP100601.1 RefSeq gene 670195 670869 . - . ID=gene-NLI98_RS03280;Name=NLI98_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03280;old_locus_tag=NLI98_03280 NZ_CP100601.1 Protein Homology CDS 670195 670869 . - 0 ID=cds-WP_016532672.1;Parent=gene-NLI98_RS03280;Dbxref=Genbank:WP_016532672.1;Name=WP_016532672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228900.1;locus_tag=NLI98_RS03280;product=urease accessory protein UreF;protein_id=WP_016532672.1;transl_table=11 NZ_CP100601.1 RefSeq gene 670871 671347 . - . ID=gene-NLI98_RS03285;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=NLI98_RS03285;old_locus_tag=NLI98_03285 NZ_CP100601.1 Protein Homology CDS 670871 671347 . - 0 ID=cds-WP_002916875.1;Parent=gene-NLI98_RS03285;Dbxref=Genbank:WP_002916875.1;Name=WP_002916875.1;Ontology_term=GO:0006457,GO:0019627,GO:0065003,GO:0016151;gbkey=CDS;gene=ureE;go_function=nickel cation binding|0016151||IEA;go_process=protein folding|0006457||IEA,urea metabolic process|0019627||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228899.1;locus_tag=NLI98_RS03285;product=urease accessory protein UreE;protein_id=WP_002916875.1;transl_table=11 NZ_CP100601.1 RefSeq gene 671357 673060 . - . ID=gene-NLI98_RS03290;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=NLI98_RS03290;old_locus_tag=NLI98_03290 NZ_CP100601.1 Protein Homology CDS 671357 673060 . - 0 ID=cds-WP_002916874.1;Parent=gene-NLI98_RS03290;Dbxref=Genbank:WP_002916874.1;Name=WP_002916874.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228898.1;locus_tag=NLI98_RS03290;product=urease subunit alpha;protein_id=WP_002916874.1;transl_table=11 NZ_CP100601.1 RefSeq gene 673053 673373 . - . ID=gene-NLI98_RS03295;Name=NLI98_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03295;old_locus_tag=NLI98_03295 NZ_CP100601.1 Protein Homology CDS 673053 673373 . - 0 ID=cds-WP_032421838.1;Parent=gene-NLI98_RS03295;Dbxref=Genbank:WP_032421838.1;Name=WP_032421838.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228897.1;locus_tag=NLI98_RS03295;product=urease subunit beta;protein_id=WP_032421838.1;transl_table=11 NZ_CP100601.1 RefSeq gene 673383 673685 . - . ID=gene-NLI98_RS03300;Name=NLI98_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03300;old_locus_tag=NLI98_03300 NZ_CP100601.1 Protein Homology CDS 673383 673685 . - 0 ID=cds-WP_002916871.1;Parent=gene-NLI98_RS03300;Dbxref=Genbank:WP_002916871.1;Name=WP_002916871.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228896.1;locus_tag=NLI98_RS03300;product=urease subunit gamma;protein_id=WP_002916871.1;transl_table=11 NZ_CP100601.1 RefSeq gene 673695 674519 . - . ID=gene-NLI98_RS03305;Name=NLI98_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03305;old_locus_tag=NLI98_03305 NZ_CP100601.1 Protein Homology CDS 673695 674519 . - 0 ID=cds-WP_049001736.1;Parent=gene-NLI98_RS03305;Dbxref=Genbank:WP_049001736.1;Name=WP_049001736.1;Ontology_term=GO:0006807,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228895.1;locus_tag=NLI98_RS03305;product=urease accessory protein UreD;protein_id=WP_049001736.1;transl_table=11 NZ_CP100601.1 RefSeq gene 674509 674655 . + . ID=gene-NLI98_RS03310;Name=NLI98_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03310;old_locus_tag=NLI98_03310 NZ_CP100601.1 Protein Homology CDS 674509 674655 . + 0 ID=cds-WP_004144529.1;Parent=gene-NLI98_RS03310;Dbxref=Genbank:WP_004144529.1;Name=WP_004144529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228894.1;locus_tag=NLI98_RS03310;product=short-chain dehydrogenase;protein_id=WP_004144529.1;transl_table=11 NZ_CP100601.1 RefSeq gene 674666 674785 . - . ID=gene-NLI98_RS03315;Name=NLI98_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03315;old_locus_tag=NLI98_03315 NZ_CP100601.1 Protein Homology CDS 674666 674785 . - 0 ID=cds-WP_020324810.1;Parent=gene-NLI98_RS03315;Dbxref=Genbank:WP_020324810.1;Name=WP_020324810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228893.1;locus_tag=NLI98_RS03315;product=hypothetical protein;protein_id=WP_020324810.1;transl_table=11 NZ_CP100601.1 RefSeq gene 674917 675534 . - . ID=gene-NLI98_RS03320;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=NLI98_RS03320;old_locus_tag=NLI98_03320 NZ_CP100601.1 Protein Homology CDS 674917 675534 . - 0 ID=cds-WP_004144530.1;Parent=gene-NLI98_RS03320;Dbxref=Genbank:WP_004144530.1;Name=WP_004144530.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228892.1;locus_tag=NLI98_RS03320;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_004144530.1;transl_table=11 NZ_CP100601.1 RefSeq gene 675642 676025 . + . ID=gene-NLI98_RS03325;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=NLI98_RS03325;old_locus_tag=NLI98_03325 NZ_CP100601.1 Protein Homology CDS 675642 676025 . + 0 ID=cds-WP_004150923.1;Parent=gene-NLI98_RS03325;Dbxref=Genbank:WP_004150923.1;Name=WP_004150923.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228891.1;locus_tag=NLI98_RS03325;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_004150923.1;transl_table=11 NZ_CP100601.1 RefSeq gene 676224 677045 . + . ID=gene-NLI98_RS03330;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=NLI98_RS03330;old_locus_tag=NLI98_03330 NZ_CP100601.1 Protein Homology CDS 676224 677045 . + 0 ID=cds-WP_004144532.1;Parent=gene-NLI98_RS03330;Dbxref=Genbank:WP_004144532.1;Name=WP_004144532.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;gene=bacA;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311967.1;locus_tag=NLI98_RS03330;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_004144532.1;transl_table=11 NZ_CP100601.1 RefSeq gene 677057 678298 . - . ID=gene-NLI98_RS03335;Name=NLI98_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03335;old_locus_tag=NLI98_03335 NZ_CP100601.1 Protein Homology CDS 677057 678298 . - 0 ID=cds-WP_002916864.1;Parent=gene-NLI98_RS03335;Dbxref=Genbank:WP_002916864.1;Name=WP_002916864.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228889.1;locus_tag=NLI98_RS03335;product=multifunctional CCA addition/repair protein;protein_id=WP_002916864.1;transl_table=11 NZ_CP100601.1 RefSeq gene 678360 678980 . - . ID=gene-NLI98_RS03340;Name=NLI98_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03340;old_locus_tag=NLI98_03340 NZ_CP100601.1 Protein Homology CDS 678360 678980 . - 0 ID=cds-WP_002916862.1;Parent=gene-NLI98_RS03340;Dbxref=Genbank:WP_002916862.1;Name=WP_002916862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228888.1;locus_tag=NLI98_RS03340;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_002916862.1;transl_table=11 NZ_CP100601.1 RefSeq gene 679195 680493 . + . ID=gene-NLI98_RS03345;Name=NLI98_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03345;old_locus_tag=NLI98_03345 NZ_CP100601.1 Protein Homology CDS 679195 680493 . + 0 ID=cds-WP_088498274.1;Parent=gene-NLI98_RS03345;Dbxref=Genbank:WP_088498274.1;Name=WP_088498274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228887.1;locus_tag=NLI98_RS03345;product=inorganic triphosphatase;protein_id=WP_088498274.1;transl_table=11 NZ_CP100601.1 RefSeq gene 680514 683351 . + . ID=gene-NLI98_RS03350;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=NLI98_RS03350;old_locus_tag=NLI98_03350 NZ_CP100601.1 Protein Homology CDS 680514 683351 . + 0 ID=cds-WP_014906913.1;Parent=gene-NLI98_RS03350;Dbxref=Genbank:WP_014906913.1;Name=WP_014906913.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228886.1;locus_tag=NLI98_RS03350;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_014906913.1;transl_table=11 NZ_CP100601.1 RefSeq gene 683410 684843 . + . ID=gene-NLI98_RS03355;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=NLI98_RS03355;old_locus_tag=NLI98_03355 NZ_CP100601.1 Protein Homology CDS 683410 684843 . + 0 ID=cds-WP_002916858.1;Parent=gene-NLI98_RS03355;Dbxref=Genbank:WP_002916858.1;Name=WP_002916858.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228885.1;locus_tag=NLI98_RS03355;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_002916858.1;transl_table=11 NZ_CP100601.1 RefSeq gene 684921 685070 . - . ID=gene-NLI98_RS03360;Name=NLI98_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03360;old_locus_tag=NLI98_03360 NZ_CP100601.1 Protein Homology CDS 684921 685070 . - 0 ID=cds-WP_004144536.1;Parent=gene-NLI98_RS03360;Dbxref=Genbank:WP_004144536.1;Name=WP_004144536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228884.1;locus_tag=NLI98_RS03360;product=hypothetical protein;protein_id=WP_004144536.1;transl_table=11 NZ_CP100601.1 RefSeq gene 685062 685259 . + . ID=gene-NLI98_RS03365;Name=glgS;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=NLI98_RS03365;old_locus_tag=NLI98_03365 NZ_CP100601.1 Protein Homology CDS 685062 685259 . + 0 ID=cds-WP_002916857.1;Parent=gene-NLI98_RS03365;Dbxref=Genbank:WP_002916857.1;Name=WP_002916857.1;gbkey=CDS;gene=glgS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228883.1;locus_tag=NLI98_RS03365;product=cell surface composition regulator GlgS;protein_id=WP_002916857.1;transl_table=11 NZ_CP100601.1 RefSeq gene 685295 685567 . - . ID=gene-NLI98_RS03370;Name=NLI98_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03370;old_locus_tag=NLI98_03370 NZ_CP100601.1 Protein Homology CDS 685295 685567 . - 0 ID=cds-WP_002916856.1;Parent=gene-NLI98_RS03370;Dbxref=Genbank:WP_002916856.1;Name=WP_002916856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228882.1;locus_tag=NLI98_RS03370;product=accessory factor UbiK family protein;protein_id=WP_002916856.1;transl_table=11 NZ_CP100601.1 cmsearch riboswitch 685688 685839 . + . ID=id-NZ_CP100601.1:685688..685839;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100601.1 RefSeq gene 685945 686598 . + . ID=gene-NLI98_RS03375;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=NLI98_RS03375;old_locus_tag=NLI98_03375 NZ_CP100601.1 Protein Homology CDS 685945 686598 . + 0 ID=cds-WP_004185664.1;Parent=gene-NLI98_RS03375;Dbxref=Genbank:WP_004185664.1;Name=WP_004185664.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228881.1;locus_tag=NLI98_RS03375;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_004185664.1;transl_table=11 NZ_CP100601.1 RefSeq gene 686660 687430 . - . ID=gene-NLI98_RS03380;Name=zupT;gbkey=Gene;gene=zupT;gene_biotype=protein_coding;locus_tag=NLI98_RS03380;old_locus_tag=NLI98_03380 NZ_CP100601.1 Protein Homology CDS 686660 687430 . - 0 ID=cds-WP_038808242.1;Parent=gene-NLI98_RS03380;Dbxref=Genbank:WP_038808242.1;Name=WP_038808242.1;gbkey=CDS;gene=zupT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228880.1;locus_tag=NLI98_RS03380;product=zinc transporter ZupT;protein_id=WP_038808242.1;transl_table=11 NZ_CP100601.1 RefSeq gene 687617 688408 . + . ID=gene-NLI98_RS03385;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=NLI98_RS03385;old_locus_tag=NLI98_03385 NZ_CP100601.1 Protein Homology CDS 687617 688408 . + 0 ID=cds-WP_004174357.1;Parent=gene-NLI98_RS03385;Dbxref=Genbank:WP_004174357.1;Name=WP_004174357.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228879.1;locus_tag=NLI98_RS03385;product=4%2C5-DOPA dioxygenase extradiol;protein_id=WP_004174357.1;transl_table=11 NZ_CP100601.1 RefSeq gene 688453 689613 . - . ID=gene-NLI98_RS03390;Name=NLI98_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03390;old_locus_tag=NLI98_03390 NZ_CP100601.1 Protein Homology CDS 688453 689613 . - 0 ID=cds-WP_004144540.1;Parent=gene-NLI98_RS03390;Dbxref=Genbank:WP_004144540.1;Name=WP_004144540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228878.1;locus_tag=NLI98_RS03390;product=glutathionylspermidine synthase family protein;protein_id=WP_004144540.1;transl_table=11 NZ_CP100601.1 RefSeq gene 689619 690290 . - . ID=gene-NLI98_RS03395;Name=NLI98_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03395;old_locus_tag=NLI98_03395 NZ_CP100601.1 Protein Homology CDS 689619 690290 . - 0 ID=cds-WP_002916849.1;Parent=gene-NLI98_RS03395;Dbxref=Genbank:WP_002916849.1;Name=WP_002916849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228877.1;locus_tag=NLI98_RS03395;product=DUF1190 family protein;protein_id=WP_002916849.1;transl_table=11 NZ_CP100601.1 RefSeq gene 690458 691930 . - . ID=gene-NLI98_RS03400;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=NLI98_RS03400;old_locus_tag=NLI98_03400 NZ_CP100601.1 Protein Homology CDS 690458 691930 . - 0 ID=cds-WP_004174363.1;Parent=gene-NLI98_RS03400;Dbxref=Genbank:WP_004174363.1;Name=WP_004174363.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228876.1;locus_tag=NLI98_RS03400;product=outer membrane channel protein TolC;protein_id=WP_004174363.1;transl_table=11 NZ_CP100601.1 RefSeq gene 692127 692759 . + . ID=gene-NLI98_RS03405;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=NLI98_RS03405;old_locus_tag=NLI98_03405 NZ_CP100601.1 Protein Homology CDS 692127 692759 . + 0 ID=cds-WP_002916848.1;Parent=gene-NLI98_RS03405;Dbxref=Genbank:WP_002916848.1;Name=WP_002916848.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228875.1;locus_tag=NLI98_RS03405;product=ADP-ribose diphosphatase;protein_id=WP_002916848.1;transl_table=11 NZ_CP100601.1 RefSeq gene 692756 693178 . + . ID=gene-NLI98_RS03410;Name=NLI98_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03410;old_locus_tag=NLI98_03410 NZ_CP100601.1 Protein Homology CDS 692756 693178 . + 0 ID=cds-WP_002916847.1;Parent=gene-NLI98_RS03410;Dbxref=Genbank:WP_002916847.1;Name=WP_002916847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228874.1;locus_tag=NLI98_RS03410;product=DUF1249 family protein;protein_id=WP_002916847.1;transl_table=11 NZ_CP100601.1 RefSeq gene 693203 694030 . + . ID=gene-NLI98_RS03415;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=NLI98_RS03415;old_locus_tag=NLI98_03415 NZ_CP100601.1 Protein Homology CDS 693203 694030 . + 0 ID=cds-WP_002916846.1;Parent=gene-NLI98_RS03415;Dbxref=Genbank:WP_002916846.1;Name=WP_002916846.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228873.1;locus_tag=NLI98_RS03415;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_002916846.1;transl_table=11 NZ_CP100601.1 RefSeq gene 694030 694605 . + . ID=gene-NLI98_RS03420;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=NLI98_RS03420;old_locus_tag=NLI98_03420 NZ_CP100601.1 Protein Homology CDS 694030 694605 . + 0 ID=cds-WP_002916845.1;Parent=gene-NLI98_RS03420;Dbxref=Genbank:WP_002916845.1;Name=WP_002916845.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228872.1;locus_tag=NLI98_RS03420;product=esterase YqiA;protein_id=WP_002916845.1;transl_table=11 NZ_CP100601.1 RefSeq gene 694636 696531 . + . ID=gene-NLI98_RS03425;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=NLI98_RS03425;old_locus_tag=NLI98_03425 NZ_CP100601.1 Protein Homology CDS 694636 696531 . + 0 ID=cds-WP_002916844.1;Parent=gene-NLI98_RS03425;Dbxref=Genbank:WP_002916844.1;Name=WP_002916844.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228871.1;locus_tag=NLI98_RS03425;product=DNA topoisomerase IV subunit B;protein_id=WP_002916844.1;transl_table=11 NZ_CP100601.1 RefSeq gene 696604 696918 . - . ID=gene-NLI98_RS03430;Name=NLI98_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03430;old_locus_tag=NLI98_03430 NZ_CP100601.1 Protein Homology CDS 696604 696918 . - 0 ID=cds-WP_002916842.1;Parent=gene-NLI98_RS03430;Dbxref=Genbank:WP_002916842.1;Name=WP_002916842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228870.1;locus_tag=NLI98_RS03430;product=antibiotic biosynthesis monooxygenase;protein_id=WP_002916842.1;transl_table=11 NZ_CP100601.1 RefSeq gene 696999 697580 . - . ID=gene-NLI98_RS03435;Name=NLI98_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03435;old_locus_tag=NLI98_03435 NZ_CP100601.1 Protein Homology CDS 696999 697580 . - 0 ID=cds-WP_002916840.1;Parent=gene-NLI98_RS03435;Dbxref=Genbank:WP_002916840.1;Name=WP_002916840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228869.1;locus_tag=NLI98_RS03435;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_002916840.1;transl_table=11 NZ_CP100601.1 RefSeq gene 697687 699030 . - . ID=gene-NLI98_RS03440;Name=qseC;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=NLI98_RS03440;old_locus_tag=NLI98_03440 NZ_CP100601.1 Protein Homology CDS 697687 699030 . - 0 ID=cds-WP_088498275.1;Parent=gene-NLI98_RS03440;Dbxref=Genbank:WP_088498275.1;Name=WP_088498275.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=qseC;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228868.1;locus_tag=NLI98_RS03440;product=two-component system sensor histidine kinase QseC;protein_id=WP_088498275.1;transl_table=11 NZ_CP100601.1 RefSeq gene 699027 699686 . - . ID=gene-NLI98_RS03445;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=NLI98_RS03445;old_locus_tag=NLI98_03445 NZ_CP100601.1 Protein Homology CDS 699027 699686 . - 0 ID=cds-WP_002916836.1;Parent=gene-NLI98_RS03445;Dbxref=Genbank:WP_002916836.1;Name=WP_002916836.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228867.1;locus_tag=NLI98_RS03445;product=two-component system response regulator QseB;protein_id=WP_002916836.1;transl_table=11 NZ_CP100601.1 RefSeq gene 699837 700232 . + . ID=gene-NLI98_RS03450;Name=NLI98_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03450;old_locus_tag=NLI98_03450 NZ_CP100601.1 Protein Homology CDS 699837 700232 . + 0 ID=cds-WP_088498276.1;Parent=gene-NLI98_RS03450;Dbxref=Genbank:WP_088498276.1;Name=WP_088498276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228866.1;locus_tag=NLI98_RS03450;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_088498276.1;transl_table=11 NZ_CP100601.1 RefSeq gene 700310 701179 . + . ID=gene-NLI98_RS03455;Name=NLI98_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03455;old_locus_tag=NLI98_03455 NZ_CP100601.1 Protein Homology CDS 700310 701179 . + 0 ID=cds-WP_002916831.1;Parent=gene-NLI98_RS03455;Dbxref=Genbank:WP_002916831.1;Name=WP_002916831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228865.1;locus_tag=NLI98_RS03455;product=AraC family transcriptional regulator;protein_id=WP_002916831.1;transl_table=11 NZ_CP100601.1 RefSeq gene 701301 703559 . + . ID=gene-NLI98_RS03460;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=NLI98_RS03460;old_locus_tag=NLI98_03460 NZ_CP100601.1 Protein Homology CDS 701301 703559 . + 0 ID=cds-WP_004181324.1;Parent=gene-NLI98_RS03460;Dbxref=Genbank:WP_004181324.1;Name=WP_004181324.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228864.1;locus_tag=NLI98_RS03460;product=DNA topoisomerase IV subunit A;protein_id=WP_004181324.1;transl_table=11 NZ_CP100601.1 RefSeq gene 703751 704488 . + . ID=gene-NLI98_RS03465;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=NLI98_RS03465;old_locus_tag=NLI98_03465 NZ_CP100601.1 Protein Homology CDS 703751 704488 . + 0 ID=cds-WP_002916826.1;Parent=gene-NLI98_RS03465;Dbxref=Genbank:WP_002916826.1;Name=WP_002916826.1;gbkey=CDS;gene=plsC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228863.1;locus_tag=NLI98_RS03465;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_002916826.1;transl_table=11 NZ_CP100601.1 RefSeq gene 704572 705984 . + . ID=gene-NLI98_RS03470;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=NLI98_RS03470;old_locus_tag=NLI98_03470 NZ_CP100601.1 Protein Homology CDS 704572 705984 . + 0 ID=cds-WP_004144547.1;Parent=gene-NLI98_RS03470;Dbxref=Genbank:WP_004144547.1;Name=WP_004144547.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228862.1;locus_tag=NLI98_RS03470;product=cell division protein FtsP;protein_id=WP_004144547.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 706018 708349 . + . ID=gene-NLI98_RS03475;Name=NLI98_RS03475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS03475;old_locus_tag=NLI98_03475;pseudo=true NZ_CP100601.1 Protein Homology CDS 706018 708349 . + 0 ID=cds-NLI98_RS03475;Parent=gene-NLI98_RS03475;Note=frameshifted;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228861.1;locus_tag=NLI98_RS03475;product=YgiQ family radical SAM protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 708349 708876 . + . ID=gene-NLI98_RS03480;Name=NLI98_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03480;old_locus_tag=NLI98_03480 NZ_CP100601.1 Protein Homology CDS 708349 708876 . + 0 ID=cds-WP_004144550.1;Parent=gene-NLI98_RS03480;Dbxref=Genbank:WP_004144550.1;Name=WP_004144550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228860.1;locus_tag=NLI98_RS03480;product=GNAT family N-acetyltransferase;protein_id=WP_004144550.1;transl_table=11 NZ_CP100601.1 RefSeq gene 708912 709739 . - . ID=gene-NLI98_RS03485;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=NLI98_RS03485;old_locus_tag=NLI98_03485 NZ_CP100601.1 Protein Homology CDS 708912 709739 . - 0 ID=cds-WP_002916796.1;Parent=gene-NLI98_RS03485;Dbxref=Genbank:WP_002916796.1;Name=WP_002916796.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228859.1;locus_tag=NLI98_RS03485;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_002916796.1;transl_table=11 NZ_CP100601.1 RefSeq gene 709885 711048 . - . ID=gene-NLI98_RS03490;Name=yqhD;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=NLI98_RS03490;old_locus_tag=NLI98_03490 NZ_CP100601.1 Protein Homology CDS 709885 711048 . - 0 ID=cds-WP_004144551.1;Parent=gene-NLI98_RS03490;Dbxref=Genbank:WP_004144551.1;Name=WP_004144551.1;Ontology_term=GO:0046872,GO:1990362;gbkey=CDS;gene=yqhD;go_function=metal ion binding|0046872||IEA,butanol dehydrogenase activity|1990362||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228858.1;locus_tag=NLI98_RS03490;product=alcohol dehydrogenase;protein_id=WP_004144551.1;transl_table=11 NZ_CP100601.1 RefSeq gene 711245 712144 . + . ID=gene-NLI98_RS03495;Name=NLI98_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03495;old_locus_tag=NLI98_03495 NZ_CP100601.1 Protein Homology CDS 711245 712144 . + 0 ID=cds-WP_014906921.1;Parent=gene-NLI98_RS03495;Dbxref=Genbank:WP_014906921.1;Name=WP_014906921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228857.1;locus_tag=NLI98_RS03495;product=AraC family transcriptional regulator;protein_id=WP_014906921.1;transl_table=11 NZ_CP100601.1 RefSeq gene 712194 712853 . - . ID=gene-NLI98_RS03500;Name=NLI98_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03500;old_locus_tag=NLI98_03500 NZ_CP100601.1 Protein Homology CDS 712194 712853 . - 0 ID=cds-WP_002916791.1;Parent=gene-NLI98_RS03500;Dbxref=Genbank:WP_002916791.1;Name=WP_002916791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228856.1;locus_tag=NLI98_RS03500;product=DedA family protein;protein_id=WP_002916791.1;transl_table=11 NZ_CP100601.1 RefSeq gene 712985 714172 . - . ID=gene-NLI98_RS03505;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=NLI98_RS03505;old_locus_tag=NLI98_03505 NZ_CP100601.1 Protein Homology CDS 712985 714172 . - 0 ID=cds-WP_088498278.1;Parent=gene-NLI98_RS03505;Dbxref=Genbank:WP_088498278.1;Name=WP_088498278.1;Ontology_term=GO:0006520,GO:0019346,GO:0004121,GO:0030170;gbkey=CDS;gene=metC;go_function=cystathionine beta-lyase activity|0004121||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228855.1;locus_tag=NLI98_RS03505;product=cystathionine beta-lyase;protein_id=WP_088498278.1;transl_table=11 NZ_CP100601.1 RefSeq gene 714423 715154 . + . ID=gene-NLI98_RS03510;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=NLI98_RS03510;old_locus_tag=NLI98_03510 NZ_CP100601.1 Protein Homology CDS 714423 715154 . + 0 ID=cds-WP_048265989.1;Parent=gene-NLI98_RS03510;Dbxref=Genbank:WP_048265989.1;Name=WP_048265989.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228853.1;locus_tag=NLI98_RS03510;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_048265989.1;transl_table=11 NZ_CP100601.1 RefSeq gene 715161 715586 . + . ID=gene-NLI98_RS03515;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=NLI98_RS03515;old_locus_tag=NLI98_03515 NZ_CP100601.1 Protein Homology CDS 715161 715586 . + 0 ID=cds-WP_002916785.1;Parent=gene-NLI98_RS03515;Dbxref=Genbank:WP_002916785.1;Name=WP_002916785.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228852.1;locus_tag=NLI98_RS03515;product=TonB system transport protein ExbD;protein_id=WP_002916785.1;transl_table=11 NZ_CP100601.1 RefSeq gene 715791 717209 . + . ID=gene-NLI98_RS03520;Name=NLI98_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03520;old_locus_tag=NLI98_03520 NZ_CP100601.1 Protein Homology CDS 715791 717209 . + 0 ID=cds-WP_002916782.1;Parent=gene-NLI98_RS03520;Dbxref=Genbank:WP_002916782.1;Name=WP_002916782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228851.1;locus_tag=NLI98_RS03520;product=MFS transporter;protein_id=WP_002916782.1;transl_table=11 NZ_CP100601.1 RefSeq gene 717223 718746 . + . ID=gene-NLI98_RS03525;Name=NLI98_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03525;old_locus_tag=NLI98_03525 NZ_CP100601.1 Protein Homology CDS 717223 718746 . + 0 ID=cds-WP_023158646.1;Parent=gene-NLI98_RS03525;Dbxref=Genbank:WP_023158646.1;Name=WP_023158646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228850.1;locus_tag=NLI98_RS03525;product=glycoside hydrolase 43 family protein;protein_id=WP_023158646.1;transl_table=11 NZ_CP100601.1 RefSeq gene 718853 719347 . + . ID=gene-NLI98_RS03530;Name=NLI98_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03530;old_locus_tag=NLI98_03530 NZ_CP100601.1 Protein Homology CDS 718853 719347 . + 0 ID=cds-WP_004105804.1;Parent=gene-NLI98_RS03530;Dbxref=Genbank:WP_004105804.1;Name=WP_004105804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228849.1;locus_tag=NLI98_RS03530;product=TIGR00645 family protein;protein_id=WP_004105804.1;transl_table=11 NZ_CP100601.1 RefSeq gene 719469 720356 . + . ID=gene-NLI98_RS03535;Name=NLI98_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03535;old_locus_tag=NLI98_03535 NZ_CP100601.1 Protein Homology CDS 719469 720356 . + 0 ID=cds-WP_004144560.1;Parent=gene-NLI98_RS03535;Dbxref=Genbank:WP_004144560.1;Name=WP_004144560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228848.1;locus_tag=NLI98_RS03535;product=dienelactone hydrolase family protein;protein_id=WP_004144560.1;transl_table=11 NZ_CP100601.1 RefSeq gene 720435 720722 . + . ID=gene-NLI98_RS03540;Name=NLI98_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03540;old_locus_tag=NLI98_03540 NZ_CP100601.1 Protein Homology CDS 720435 720722 . + 0 ID=cds-WP_087834957.1;Parent=gene-NLI98_RS03540;Dbxref=Genbank:WP_087834957.1;Name=WP_087834957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228847.1;locus_tag=NLI98_RS03540;product=DUF2623 domain-containing protein;protein_id=WP_087834957.1;transl_table=11 NZ_CP100601.1 RefSeq gene 720795 721661 . - . ID=gene-NLI98_RS03545;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=NLI98_RS03545;old_locus_tag=NLI98_03545 NZ_CP100601.1 Protein Homology CDS 720795 721661 . - 0 ID=cds-WP_038432685.1;Parent=gene-NLI98_RS03545;Dbxref=Genbank:WP_038432685.1;Name=WP_038432685.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=yghU;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228846.1;locus_tag=NLI98_RS03545;product=glutathione-dependent disulfide-bond oxidoreductase;protein_id=WP_038432685.1;transl_table=11 NZ_CP100601.1 RefSeq gene 721709 722269 . - . ID=gene-NLI98_RS03550;Name=NLI98_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03550;old_locus_tag=NLI98_03550 NZ_CP100601.1 Protein Homology CDS 721709 722269 . - 0 ID=cds-WP_004150918.1;Parent=gene-NLI98_RS03550;Dbxref=Genbank:WP_004150918.1;Name=WP_004150918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228845.1;locus_tag=NLI98_RS03550;product=thioredoxin domain-containing protein;protein_id=WP_004150918.1;transl_table=11 NZ_CP100601.1 RefSeq gene 722290 722412 . + . ID=gene-NLI98_RS03555;Name=NLI98_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03555;old_locus_tag=NLI98_03555 NZ_CP100601.1 Protein Homology CDS 722290 722412 . + 0 ID=cds-WP_004217169.1;Parent=gene-NLI98_RS03555;Dbxref=Genbank:WP_004217169.1;Name=WP_004217169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228844.1;locus_tag=NLI98_RS03555;product=hypothetical protein;protein_id=WP_004217169.1;transl_table=11 NZ_CP100601.1 RefSeq gene 722489 724354 . + . ID=gene-NLI98_RS03560;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=NLI98_RS03560;old_locus_tag=NLI98_03560 NZ_CP100601.1 Protein Homology CDS 722489 724354 . + 0 ID=cds-WP_002916740.1;Parent=gene-NLI98_RS03560;Dbxref=Genbank:WP_002916740.1;Name=WP_002916740.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004149826.1;locus_tag=NLI98_RS03560;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_002916740.1;transl_table=11 NZ_CP100601.1 RefSeq gene 724500 725681 . + . ID=gene-NLI98_RS03565;Name=NLI98_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03565;old_locus_tag=NLI98_03565 NZ_CP100601.1 Protein Homology CDS 724500 725681 . + 0 ID=cds-WP_065908224.1;Parent=gene-NLI98_RS03565;Dbxref=Genbank:WP_065908224.1;Name=WP_065908224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228842.1;locus_tag=NLI98_RS03565;product=PLP-dependent aminotransferase family protein;protein_id=WP_065908224.1;transl_table=11 NZ_CP100601.1 RefSeq gene 725858 726046 . - . ID=gene-NLI98_RS03570;Name=NLI98_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03570;old_locus_tag=NLI98_03570 NZ_CP100601.1 Protein Homology CDS 725858 726046 . - 0 ID=cds-WP_002916738.1;Parent=gene-NLI98_RS03570;Dbxref=Genbank:WP_002916738.1;Name=WP_002916738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228841.1;locus_tag=NLI98_RS03570;product=hypothetical protein;protein_id=WP_002916738.1;transl_table=11 NZ_CP100601.1 RefSeq gene 726246 726590 . - . ID=gene-NLI98_RS03575;Name=NLI98_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03575;old_locus_tag=NLI98_03575 NZ_CP100601.1 Protein Homology CDS 726246 726590 . - 0 ID=cds-WP_004174409.1;Parent=gene-NLI98_RS03575;Dbxref=Genbank:WP_004174409.1;Name=WP_004174409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228840.1;locus_tag=NLI98_RS03575;product=hypothetical protein;protein_id=WP_004174409.1;transl_table=11 NZ_CP100601.1 RefSeq gene 726677 727279 . - . ID=gene-NLI98_RS03580;Name=NLI98_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03580;old_locus_tag=NLI98_03580 NZ_CP100601.1 Protein Homology CDS 726677 727279 . - 0 ID=cds-WP_020802400.1;Parent=gene-NLI98_RS03580;Dbxref=Genbank:WP_020802400.1;Name=WP_020802400.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228839.1;locus_tag=NLI98_RS03580;product=short chain dehydrogenase;protein_id=WP_020802400.1;transl_table=11 NZ_CP100601.1 RefSeq gene 727377 728288 . + . ID=gene-NLI98_RS03585;Name=NLI98_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03585;old_locus_tag=NLI98_03585 NZ_CP100601.1 Protein Homology CDS 727377 728288 . + 0 ID=cds-WP_032440318.1;Parent=gene-NLI98_RS03585;Dbxref=Genbank:WP_032440318.1;Name=WP_032440318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228838.1;locus_tag=NLI98_RS03585;product=LysR family transcriptional regulator;protein_id=WP_032440318.1;transl_table=11 NZ_CP100601.1 RefSeq gene 728289 729437 . - . ID=gene-NLI98_RS03590;Name=NLI98_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03590;old_locus_tag=NLI98_03590 NZ_CP100601.1 Protein Homology CDS 728289 729437 . - 0 ID=cds-WP_088498406.1;Parent=gene-NLI98_RS03590;Dbxref=Genbank:WP_088498406.1;Name=WP_088498406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228837.1;locus_tag=NLI98_RS03590;product=PLP-dependent aspartate aminotransferase family protein;protein_id=WP_088498406.1;transl_table=11 NZ_CP100601.1 RefSeq gene 729448 730824 . - . ID=gene-NLI98_RS03595;Name=NLI98_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03595;old_locus_tag=NLI98_03595 NZ_CP100601.1 Protein Homology CDS 729448 730824 . - 0 ID=cds-WP_172676862.1;Parent=gene-NLI98_RS03595;Dbxref=Genbank:WP_172676862.1;Name=WP_172676862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228836.1;locus_tag=NLI98_RS03595;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_172676862.1;transl_table=11 NZ_CP100601.1 RefSeq gene 731468 731761 . + . ID=gene-NLI98_RS03600;Name=NLI98_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03600;old_locus_tag=NLI98_03600 NZ_CP100601.1 Protein Homology CDS 731468 731761 . + 0 ID=cds-WP_004150912.1;Parent=gene-NLI98_RS03600;Dbxref=Genbank:WP_004150912.1;Name=WP_004150912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228835.1;locus_tag=NLI98_RS03600;product=DUF1778 domain-containing protein;protein_id=WP_004150912.1;transl_table=11 NZ_CP100601.1 RefSeq gene 731758 732243 . + . ID=gene-NLI98_RS03605;Name=NLI98_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03605;old_locus_tag=NLI98_03605 NZ_CP100601.1 Protein Homology CDS 731758 732243 . + 0 ID=cds-WP_019704987.1;Parent=gene-NLI98_RS03605;Dbxref=Genbank:WP_019704987.1;Name=WP_019704987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004889762.1;locus_tag=NLI98_RS03605;product=GNAT family N-acetyltransferase;protein_id=WP_019704987.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 732941 733535 . + . ID=gene-NLI98_RS03610;Name=NLI98_RS03610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS03610;old_locus_tag=NLI98_03610;pseudo=true NZ_CP100601.1 Protein Homology CDS 732941 733535 . + 0 ID=cds-NLI98_RS03610;Parent=gene-NLI98_RS03610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228833.1;locus_tag=NLI98_RS03610;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 733632 733848 . + . ID=gene-NLI98_RS03615;Name=NLI98_RS03615;end_range=733848,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS03615;old_locus_tag=NLI98_03615;partial=true;pseudo=true NZ_CP100601.1 Protein Homology CDS 733632 733848 . + 0 ID=cds-NLI98_RS03615;Parent=gene-NLI98_RS03615;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=733848,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=NLI98_RS03615;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 734345 734420 . - . ID=gene-NLI98_RS03620;Name=NLI98_RS03620;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS03620;old_locus_tag=NLI98_03620 NZ_CP100601.1 tRNAscan-SE tRNA 734345 734420 . - . ID=rna-NLI98_RS03620;Parent=gene-NLI98_RS03620;anticodon=(pos:complement(734385..734387));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS03620;product=tRNA-Phe NZ_CP100601.1 tRNAscan-SE exon 734345 734420 . - . ID=exon-NLI98_RS03620-1;Parent=rna-NLI98_RS03620;anticodon=(pos:complement(734385..734387));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS03620;product=tRNA-Phe NZ_CP100601.1 RefSeq gene 734526 735239 . - . ID=gene-NLI98_RS03625;Name=NLI98_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03625;old_locus_tag=NLI98_03625 NZ_CP100601.1 Protein Homology CDS 734526 735239 . - 0 ID=cds-WP_002916694.1;Parent=gene-NLI98_RS03625;Dbxref=Genbank:WP_002916694.1;Name=WP_002916694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228769.1;locus_tag=NLI98_RS03625;product=DUF554 domain-containing protein;protein_id=WP_002916694.1;transl_table=11 NZ_CP100601.1 RefSeq gene 735659 737797 . + . ID=gene-NLI98_RS03630;Name=NLI98_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03630;old_locus_tag=NLI98_03630 NZ_CP100601.1 Protein Homology CDS 735659 737797 . + 0 ID=cds-WP_020801950.1;Parent=gene-NLI98_RS03630;Dbxref=Genbank:WP_020801950.1;Name=WP_020801950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228768.1;locus_tag=NLI98_RS03630;product=ornithine decarboxylase;protein_id=WP_020801950.1;transl_table=11 NZ_CP100601.1 RefSeq gene 737841 739094 . - . ID=gene-NLI98_RS03635;Name=NLI98_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03635;old_locus_tag=NLI98_03635 NZ_CP100601.1 Protein Homology CDS 737841 739094 . - 0 ID=cds-WP_004144787.1;Parent=gene-NLI98_RS03635;Dbxref=Genbank:WP_004144787.1;Name=WP_004144787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228767.1;locus_tag=NLI98_RS03635;product=nucleoside permease;protein_id=WP_004144787.1;transl_table=11 NZ_CP100601.1 RefSeq gene 739286 740368 . - . ID=gene-NLI98_RS03640;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=NLI98_RS03640;old_locus_tag=NLI98_03640 NZ_CP100601.1 Protein Homology CDS 739286 740368 . - 0 ID=cds-WP_002916629.1;Parent=gene-NLI98_RS03640;Dbxref=Genbank:WP_002916629.1;Name=WP_002916629.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123264.1;locus_tag=NLI98_RS03640;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_002916629.1;transl_table=11 NZ_CP100601.1 RefSeq gene 740418 740693 . - . ID=gene-NLI98_RS03645;Name=NLI98_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03645;old_locus_tag=NLI98_03645 NZ_CP100601.1 Protein Homology CDS 740418 740693 . - 0 ID=cds-WP_004105744.1;Parent=gene-NLI98_RS03645;Dbxref=Genbank:WP_004105744.1;Name=WP_004105744.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228764.1;locus_tag=NLI98_RS03645;product=oxidative damage protection protein;protein_id=WP_004105744.1;transl_table=11 NZ_CP100601.1 RefSeq gene 740722 741780 . - . ID=gene-NLI98_RS03650;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=NLI98_RS03650;old_locus_tag=NLI98_03650 NZ_CP100601.1 Protein Homology CDS 740722 741780 . - 0 ID=cds-WP_002916628.1;Parent=gene-NLI98_RS03650;Dbxref=Genbank:WP_002916628.1;Name=WP_002916628.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228763.1;locus_tag=NLI98_RS03650;product=A/G-specific adenine glycosylase;protein_id=WP_002916628.1;transl_table=11 NZ_CP100601.1 RefSeq gene 741917 742636 . + . ID=gene-NLI98_RS03655;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=NLI98_RS03655;old_locus_tag=NLI98_03655 NZ_CP100601.1 Protein Homology CDS 741917 742636 . + 0 ID=cds-WP_002916627.1;Parent=gene-NLI98_RS03655;Dbxref=Genbank:WP_002916627.1;Name=WP_002916627.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228762.1;locus_tag=NLI98_RS03655;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_002916627.1;transl_table=11 NZ_CP100601.1 RefSeq gene 742636 742962 . + . ID=gene-NLI98_RS03660;Name=NLI98_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03660;old_locus_tag=NLI98_03660 NZ_CP100601.1 Protein Homology CDS 742636 742962 . + 0 ID=cds-WP_032437257.1;Parent=gene-NLI98_RS03660;Dbxref=Genbank:WP_032437257.1;Name=WP_032437257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228761.1;locus_tag=NLI98_RS03660;product=YggL family protein;protein_id=WP_032437257.1;transl_table=11 NZ_CP100601.1 RefSeq gene 743013 743732 . + . ID=gene-NLI98_RS03665;Name=NLI98_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03665;old_locus_tag=NLI98_03665 NZ_CP100601.1 Protein Homology CDS 743013 743732 . + 0 ID=cds-WP_002916619.1;Parent=gene-NLI98_RS03665;Dbxref=Genbank:WP_002916619.1;Name=WP_002916619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228760.1;locus_tag=NLI98_RS03665;product=DUF2884 domain-containing protein;protein_id=WP_002916619.1;transl_table=11 NZ_CP100601.1 RefSeq gene 743779 745026 . - . ID=gene-NLI98_RS03670;Name=NLI98_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03670;old_locus_tag=NLI98_03670 NZ_CP100601.1 Protein Homology CDS 743779 745026 . - 0 ID=cds-WP_004181281.1;Parent=gene-NLI98_RS03670;Dbxref=Genbank:WP_004181281.1;Name=WP_004181281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181281.1;locus_tag=NLI98_RS03670;product=ABC transporter permease;protein_id=WP_004181281.1;transl_table=11 NZ_CP100601.1 RefSeq gene 745031 745840 . - . ID=gene-NLI98_RS03675;Name=NLI98_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03675;old_locus_tag=NLI98_03675 NZ_CP100601.1 Protein Homology CDS 745031 745840 . - 0 ID=cds-WP_004181271.1;Parent=gene-NLI98_RS03675;Dbxref=Genbank:WP_004181271.1;Name=WP_004181271.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181271.1;locus_tag=NLI98_RS03675;product=ATP-binding cassette domain-containing protein;protein_id=WP_004181271.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 745900 746945 . - . ID=gene-NLI98_RS03680;Name=NLI98_RS03680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS03680;old_locus_tag=NLI98_03680;pseudo=true NZ_CP100601.1 Protein Homology CDS 745900 746945 . - 0 ID=cds-NLI98_RS03680;Parent=gene-NLI98_RS03680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181270.1;locus_tag=NLI98_RS03680;product=sugar ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 747238 748377 . - . ID=gene-NLI98_RS03685;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=NLI98_RS03685;old_locus_tag=NLI98_03685 NZ_CP100601.1 Protein Homology CDS 747238 748377 . - 0 ID=cds-WP_088498205.1;Parent=gene-NLI98_RS03685;Dbxref=Genbank:WP_088498205.1;Name=WP_088498205.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020077950.1;locus_tag=NLI98_RS03685;product=radical SAM family heme chaperone HemW;protein_id=WP_088498205.1;transl_table=11 NZ_CP100601.1 RefSeq gene 748370 748963 . - . ID=gene-NLI98_RS03690;Name=NLI98_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03690;old_locus_tag=NLI98_03690 NZ_CP100601.1 Protein Homology CDS 748370 748963 . - 0 ID=cds-WP_002916615.1;Parent=gene-NLI98_RS03690;Dbxref=Genbank:WP_002916615.1;Name=WP_002916615.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228758.1;locus_tag=NLI98_RS03690;product=XTP/dITP diphosphatase;protein_id=WP_002916615.1;transl_table=11 NZ_CP100601.1 RefSeq gene 748976 749266 . - . ID=gene-NLI98_RS03695;Name=yggU;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=NLI98_RS03695;old_locus_tag=NLI98_03695 NZ_CP100601.1 Protein Homology CDS 748976 749266 . - 0 ID=cds-WP_088498206.1;Parent=gene-NLI98_RS03695;Dbxref=Genbank:WP_088498206.1;Name=WP_088498206.1;gbkey=CDS;gene=yggU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228757.1;locus_tag=NLI98_RS03695;product=DUF167 family protein YggU;protein_id=WP_088498206.1;transl_table=11 NZ_CP100601.1 RefSeq gene 749263 749829 . - . ID=gene-NLI98_RS03700;Name=NLI98_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03700;old_locus_tag=NLI98_03700 NZ_CP100601.1 Protein Homology CDS 749263 749829 . - 0 ID=cds-WP_002916613.1;Parent=gene-NLI98_RS03700;Dbxref=Genbank:WP_002916613.1;Name=WP_002916613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462017.1;locus_tag=NLI98_RS03700;product=YggT family protein;protein_id=WP_002916613.1;transl_table=11 NZ_CP100601.1 RefSeq gene 749850 750551 . - . ID=gene-NLI98_RS03705;Name=NLI98_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03705;old_locus_tag=NLI98_03705 NZ_CP100601.1 Protein Homology CDS 749850 750551 . - 0 ID=cds-WP_004144780.1;Parent=gene-NLI98_RS03705;Dbxref=Genbank:WP_004144780.1;Name=WP_004144780.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228755.1;locus_tag=NLI98_RS03705;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_004144780.1;transl_table=11 NZ_CP100601.1 RefSeq gene 750568 751548 . + . ID=gene-NLI98_RS03710;Name=NLI98_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03710;old_locus_tag=NLI98_03710 NZ_CP100601.1 Protein Homology CDS 750568 751548 . + 0 ID=cds-WP_004149811.1;Parent=gene-NLI98_RS03710;Dbxref=Genbank:WP_004149811.1;Name=WP_004149811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228754.1;locus_tag=NLI98_RS03710;product=type IV pilus twitching motility protein PilT;protein_id=WP_004149811.1;transl_table=11 NZ_CP100601.1 RefSeq gene 751897 752550 . + . ID=gene-NLI98_RS03715;Name=NLI98_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03715;old_locus_tag=NLI98_03715 NZ_CP100601.1 Protein Homology CDS 751897 752550 . + 0 ID=cds-WP_002916607.1;Parent=gene-NLI98_RS03715;Dbxref=Genbank:WP_002916607.1;Name=WP_002916607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228752.1;locus_tag=NLI98_RS03715;product=LuxR family transcriptional regulator;protein_id=WP_002916607.1;transl_table=11 NZ_CP100601.1 RefSeq gene 752603 753019 . - . ID=gene-NLI98_RS03720;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=NLI98_RS03720;old_locus_tag=NLI98_03720 NZ_CP100601.1 Protein Homology CDS 752603 753019 . - 0 ID=cds-WP_002916605.1;Parent=gene-NLI98_RS03720;Dbxref=Genbank:WP_002916605.1;Name=WP_002916605.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228751.1;locus_tag=NLI98_RS03720;product=Holliday junction resolvase RuvX;protein_id=WP_002916605.1;transl_table=11 NZ_CP100601.1 RefSeq gene 753019 753582 . - . ID=gene-NLI98_RS03725;Name=NLI98_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03725;old_locus_tag=NLI98_03725 NZ_CP100601.1 Protein Homology CDS 753019 753582 . - 0 ID=cds-WP_002916603.1;Parent=gene-NLI98_RS03725;Dbxref=Genbank:WP_002916603.1;Name=WP_002916603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228750.1;locus_tag=NLI98_RS03725;product=YqgE/AlgH family protein;protein_id=WP_002916603.1;transl_table=11 NZ_CP100601.1 RefSeq gene 753757 754707 . - . ID=gene-NLI98_RS03730;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=NLI98_RS03730;old_locus_tag=NLI98_03730 NZ_CP100601.1 Protein Homology CDS 753757 754707 . - 0 ID=cds-WP_002916600.1;Parent=gene-NLI98_RS03730;Dbxref=Genbank:WP_002916600.1;Name=WP_002916600.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228749.1;locus_tag=NLI98_RS03730;product=glutathione synthase;protein_id=WP_002916600.1;transl_table=11 NZ_CP100601.1 RefSeq gene 754728 755459 . - . ID=gene-NLI98_RS03735;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=NLI98_RS03735;old_locus_tag=NLI98_03735 NZ_CP100601.1 Protein Homology CDS 754728 755459 . - 0 ID=cds-WP_004181267.1;Parent=gene-NLI98_RS03735;Dbxref=Genbank:WP_004181267.1;Name=WP_004181267.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228748.1;locus_tag=NLI98_RS03735;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_004181267.1;transl_table=11 NZ_CP100601.1 RefSeq gene 755551 756258 . - . ID=gene-NLI98_RS03740;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=NLI98_RS03740;old_locus_tag=NLI98_03740 NZ_CP100601.1 Protein Homology CDS 755551 756258 . - 0 ID=cds-WP_002916589.1;Parent=gene-NLI98_RS03740;Dbxref=Genbank:WP_002916589.1;Name=WP_002916589.1;Ontology_term=GO:0004518;gbkey=CDS;gene=endA;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228747.1;locus_tag=NLI98_RS03740;product=deoxyribonuclease I;protein_id=WP_002916589.1;transl_table=11 NZ_CP100601.1 RefSeq gene 756353 756853 . - . ID=gene-NLI98_RS03745;Name=NLI98_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03745;old_locus_tag=NLI98_03745 NZ_CP100601.1 Protein Homology CDS 756353 756853 . - 0 ID=cds-WP_060415884.1;Parent=gene-NLI98_RS03745;Dbxref=Genbank:WP_060415884.1;Name=WP_060415884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228746.1;locus_tag=NLI98_RS03745;product=SprT family zinc-dependent metalloprotease;protein_id=WP_060415884.1;transl_table=11 NZ_CP100601.1 RefSeq gene 756931 758325 . - . ID=gene-NLI98_RS03750;Name=NLI98_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03750;old_locus_tag=NLI98_03750 NZ_CP100601.1 Protein Homology CDS 756931 758325 . - 0 ID=cds-WP_002916587.1;Parent=gene-NLI98_RS03750;Dbxref=Genbank:WP_002916587.1;Name=WP_002916587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228745.1;locus_tag=NLI98_RS03750;product=sugar porter family MFS transporter;protein_id=WP_002916587.1;transl_table=11 NZ_CP100601.1 RefSeq gene 758710 759864 . - . ID=gene-NLI98_RS03755;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=NLI98_RS03755;old_locus_tag=NLI98_03755 NZ_CP100601.1 Protein Homology CDS 758710 759864 . - 0 ID=cds-WP_004149807.1;Parent=gene-NLI98_RS03755;Dbxref=Genbank:WP_004149807.1;Name=WP_004149807.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123306.1;locus_tag=NLI98_RS03755;product=methionine adenosyltransferase;protein_id=WP_004149807.1;transl_table=11 NZ_CP100601.1 RefSeq gene 760012 760362 . - . ID=gene-NLI98_RS03760;Name=NLI98_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03760;old_locus_tag=NLI98_03760 NZ_CP100601.1 GeneMarkS-2+ CDS 760012 760362 . - 0 ID=cds-WP_141097421.1;Parent=gene-NLI98_RS03760;Dbxref=Genbank:WP_141097421.1;Name=WP_141097421.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS03760;product=hypothetical protein;protein_id=WP_141097421.1;transl_table=11 NZ_CP100601.1 RefSeq gene 760566 760697 . + . ID=gene-NLI98_RS03765;Name=yqgB;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=NLI98_RS03765;old_locus_tag=NLI98_03765 NZ_CP100601.1 Protein Homology CDS 760566 760697 . + 0 ID=cds-WP_002916578.1;Parent=gene-NLI98_RS03765;Dbxref=Genbank:WP_002916578.1;Name=WP_002916578.1;gbkey=CDS;gene=yqgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002916578.1;locus_tag=NLI98_RS03765;product=acid stress response protein YqgB;protein_id=WP_002916578.1;transl_table=11 NZ_CP100601.1 RefSeq gene 760706 762682 . + . ID=gene-NLI98_RS03770;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=NLI98_RS03770;old_locus_tag=NLI98_03770 NZ_CP100601.1 Protein Homology CDS 760706 762682 . + 0 ID=cds-WP_004149805.1;Parent=gene-NLI98_RS03770;Dbxref=Genbank:WP_004149805.1;Name=WP_004149805.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311841.1;locus_tag=NLI98_RS03770;product=biosynthetic arginine decarboxylase;protein_id=WP_004149805.1;transl_table=11 NZ_CP100601.1 RefSeq gene 762916 763836 . + . ID=gene-NLI98_RS03775;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=NLI98_RS03775;old_locus_tag=NLI98_03775 NZ_CP100601.1 Protein Homology CDS 762916 763836 . + 0 ID=cds-WP_002916572.1;Parent=gene-NLI98_RS03775;Dbxref=Genbank:WP_002916572.1;Name=WP_002916572.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008499737.1;locus_tag=NLI98_RS03775;product=agmatinase;protein_id=WP_002916572.1;transl_table=11 NZ_CP100601.1 RefSeq gene 763964 765184 . - . ID=gene-NLI98_RS03780;Name=NLI98_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03780;old_locus_tag=NLI98_03780 NZ_CP100601.1 Protein Homology CDS 763964 765184 . - 0 ID=cds-WP_004149802.1;Parent=gene-NLI98_RS03780;Dbxref=Genbank:WP_004149802.1;Name=WP_004149802.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228740.1;locus_tag=NLI98_RS03780;product=MFS transporter;protein_id=WP_004149802.1;transl_table=11 NZ_CP100601.1 RefSeq gene 765612 765935 . + . ID=gene-NLI98_RS03785;Name=NLI98_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03785;old_locus_tag=NLI98_03785 NZ_CP100601.1 Protein Homology CDS 765612 765935 . + 0 ID=cds-WP_004151769.1;Parent=gene-NLI98_RS03785;Dbxref=Genbank:WP_004151769.1;Name=WP_004151769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228739.1;locus_tag=NLI98_RS03785;product=non-heme iron oxygenase ferredoxin subunit;protein_id=WP_004151769.1;transl_table=11 NZ_CP100601.1 RefSeq gene 765932 766240 . + . ID=gene-NLI98_RS03790;Name=NLI98_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03790;old_locus_tag=NLI98_03790 NZ_CP100601.1 Protein Homology CDS 765932 766240 . + 0 ID=cds-WP_004144765.1;Parent=gene-NLI98_RS03790;Dbxref=Genbank:WP_004144765.1;Name=WP_004144765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228738.1;locus_tag=NLI98_RS03790;product=hypothetical protein;protein_id=WP_004144765.1;transl_table=11 NZ_CP100601.1 RefSeq gene 766251 767273 . + . ID=gene-NLI98_RS03795;Name=NLI98_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03795;old_locus_tag=NLI98_03795 NZ_CP100601.1 Protein Homology CDS 766251 767273 . + 0 ID=cds-WP_088498207.1;Parent=gene-NLI98_RS03795;Dbxref=Genbank:WP_088498207.1;Name=WP_088498207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228737.1;locus_tag=NLI98_RS03795;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_088498207.1;transl_table=11 NZ_CP100601.1 RefSeq gene 767273 768022 . + . ID=gene-NLI98_RS03800;Name=NLI98_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03800;old_locus_tag=NLI98_03800 NZ_CP100601.1 Protein Homology CDS 767273 768022 . + 0 ID=cds-WP_088498208.1;Parent=gene-NLI98_RS03800;Dbxref=Genbank:WP_088498208.1;Name=WP_088498208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228736.1;locus_tag=NLI98_RS03800;product=SDR family oxidoreductase;protein_id=WP_088498208.1;transl_table=11 NZ_CP100601.1 RefSeq gene 768036 768824 . + . ID=gene-NLI98_RS03805;Name=NLI98_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03805;old_locus_tag=NLI98_03805 NZ_CP100601.1 Protein Homology CDS 768036 768824 . + 0 ID=cds-WP_004144761.1;Parent=gene-NLI98_RS03805;Dbxref=Genbank:WP_004144761.1;Name=WP_004144761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228735.1;locus_tag=NLI98_RS03805;product=IclR family transcriptional regulator;protein_id=WP_004144761.1;transl_table=11 NZ_CP100601.1 RefSeq gene 768913 769839 . + . ID=gene-NLI98_RS03810;Name=NLI98_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03810;old_locus_tag=NLI98_03810 NZ_CP100601.1 Protein Homology CDS 768913 769839 . + 0 ID=cds-WP_038807983.1;Parent=gene-NLI98_RS03810;Dbxref=Genbank:WP_038807983.1;Name=WP_038807983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228734.1;locus_tag=NLI98_RS03810;product=VOC family protein;protein_id=WP_038807983.1;transl_table=11 NZ_CP100601.1 RefSeq gene 769836 771032 . + . ID=gene-NLI98_RS03815;Name=NLI98_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03815;old_locus_tag=NLI98_03815 NZ_CP100601.1 Protein Homology CDS 769836 771032 . + 0 ID=cds-WP_088498209.1;Parent=gene-NLI98_RS03815;Dbxref=Genbank:WP_088498209.1;Name=WP_088498209.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228733.1;locus_tag=NLI98_RS03815;product=FAD-dependent oxidoreductase;protein_id=WP_088498209.1;transl_table=11 NZ_CP100601.1 RefSeq gene 771059 772315 . + . ID=gene-NLI98_RS03820;Name=NLI98_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03820;old_locus_tag=NLI98_03820 NZ_CP100601.1 Protein Homology CDS 771059 772315 . + 0 ID=cds-WP_004144758.1;Parent=gene-NLI98_RS03820;Dbxref=Genbank:WP_004144758.1;Name=WP_004144758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228732.1;locus_tag=NLI98_RS03820;product=MFS transporter;protein_id=WP_004144758.1;transl_table=11 NZ_CP100601.1 RefSeq gene 772326 772856 . + . ID=gene-NLI98_RS03825;Name=NLI98_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03825;old_locus_tag=NLI98_03825 NZ_CP100601.1 Protein Homology CDS 772326 772856 . + 0 ID=cds-WP_088498210.1;Parent=gene-NLI98_RS03825;Dbxref=Genbank:WP_088498210.1;Name=WP_088498210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228731.1;locus_tag=NLI98_RS03825;product=cupin domain-containing protein;protein_id=WP_088498210.1;transl_table=11 NZ_CP100601.1 RefSeq gene 772866 773636 . + . ID=gene-NLI98_RS03830;Name=NLI98_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03830;old_locus_tag=NLI98_03830 NZ_CP100601.1 Protein Homology CDS 772866 773636 . + 0 ID=cds-WP_020801948.1;Parent=gene-NLI98_RS03830;Dbxref=Genbank:WP_020801948.1;Name=WP_020801948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228730.1;locus_tag=NLI98_RS03830;product=alpha/beta hydrolase;protein_id=WP_020801948.1;transl_table=11 NZ_CP100601.1 RefSeq gene 773620 774414 . + . ID=gene-NLI98_RS03835;Name=NLI98_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03835;old_locus_tag=NLI98_03835 NZ_CP100601.1 Protein Homology CDS 773620 774414 . + 0 ID=cds-WP_002916526.1;Parent=gene-NLI98_RS03835;Dbxref=Genbank:WP_002916526.1;Name=WP_002916526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228729.1;locus_tag=NLI98_RS03835;product=SDR family oxidoreductase;protein_id=WP_002916526.1;transl_table=11 NZ_CP100601.1 RefSeq gene 774424 775188 . + . ID=gene-NLI98_RS03840;Name=NLI98_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03840;old_locus_tag=NLI98_03840 NZ_CP100601.1 Protein Homology CDS 774424 775188 . + 0 ID=cds-WP_088498211.1;Parent=gene-NLI98_RS03840;Dbxref=Genbank:WP_088498211.1;Name=WP_088498211.1;Ontology_term=GO:0009435,GO:0033735;gbkey=CDS;go_function=aspartate dehydrogenase activity|0033735||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228728.1;locus_tag=NLI98_RS03840;product=aspartate dehydrogenase;protein_id=WP_088498211.1;transl_table=11 NZ_CP100601.1 RefSeq gene 775204 776673 . + . ID=gene-NLI98_RS03845;Name=NLI98_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03845;old_locus_tag=NLI98_03845 NZ_CP100601.1 Protein Homology CDS 775204 776673 . + 0 ID=cds-WP_004151779.1;Parent=gene-NLI98_RS03845;Dbxref=Genbank:WP_004151779.1;Name=WP_004151779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228727.1;locus_tag=NLI98_RS03845;product=aldehyde dehydrogenase;protein_id=WP_004151779.1;transl_table=11 NZ_CP100601.1 RefSeq gene 776687 778327 . + . ID=gene-NLI98_RS03850;Name=NLI98_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03850;old_locus_tag=NLI98_03850 NZ_CP100601.1 Protein Homology CDS 776687 778327 . + 0 ID=cds-WP_088498212.1;Parent=gene-NLI98_RS03850;Dbxref=Genbank:WP_088498212.1;Name=WP_088498212.1;Ontology_term=GO:0030976;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228726.1;locus_tag=NLI98_RS03850;product=thiamine pyrophosphate-binding protein;protein_id=WP_088498212.1;transl_table=11 NZ_CP100601.1 RefSeq gene 778464 779732 . - . ID=gene-NLI98_RS03855;Name=NLI98_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03855;old_locus_tag=NLI98_03855 NZ_CP100601.1 Protein Homology CDS 778464 779732 . - 0 ID=cds-WP_088498213.1;Parent=gene-NLI98_RS03855;Dbxref=Genbank:WP_088498213.1;Name=WP_088498213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228725.1;locus_tag=NLI98_RS03855;product=OprD family outer membrane porin;protein_id=WP_088498213.1;transl_table=11 NZ_CP100601.1 RefSeq gene 780110 780868 . - . ID=gene-NLI98_RS03860;Name=NLI98_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03860;old_locus_tag=NLI98_03860 NZ_CP100601.1 Protein Homology CDS 780110 780868 . - 0 ID=cds-WP_004151780.1;Parent=gene-NLI98_RS03860;Dbxref=Genbank:WP_004151780.1;Name=WP_004151780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461993.1;locus_tag=NLI98_RS03860;product=M48 family metallopeptidase;protein_id=WP_004151780.1;transl_table=11 NZ_CP100601.1 RefSeq gene 781147 783138 . + . ID=gene-NLI98_RS03865;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=NLI98_RS03865;old_locus_tag=NLI98_03865 NZ_CP100601.1 Protein Homology CDS 781147 783138 . + 0 ID=cds-WP_172676863.1;Parent=gene-NLI98_RS03865;Dbxref=Genbank:WP_172676863.1;Name=WP_172676863.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228723.1;locus_tag=NLI98_RS03865;product=transketolase;protein_id=WP_172676863.1;transl_table=11 NZ_CP100601.1 RefSeq gene 783523 784551 . + . ID=gene-NLI98_RS03870;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=NLI98_RS03870;old_locus_tag=NLI98_03870 NZ_CP100601.1 Protein Homology CDS 783523 784551 . + 0 ID=cds-WP_002916512.1;Parent=gene-NLI98_RS03870;Dbxref=Genbank:WP_002916512.1;Name=WP_002916512.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228722.1;locus_tag=NLI98_RS03870;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_002916512.1;transl_table=11 NZ_CP100601.1 RefSeq gene 784591 785754 . + . ID=gene-NLI98_RS03875;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=NLI98_RS03875;old_locus_tag=NLI98_03875 NZ_CP100601.1 Protein Homology CDS 784591 785754 . + 0 ID=cds-WP_002916508.1;Parent=gene-NLI98_RS03875;Dbxref=Genbank:WP_002916508.1;Name=WP_002916508.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=NLI98_RS03875;product=phosphoglycerate kinase;protein_id=WP_002916508.1;transl_table=11 NZ_CP100601.1 RefSeq gene 785852 786931 . + . ID=gene-NLI98_RS03880;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=NLI98_RS03880;old_locus_tag=NLI98_03880 NZ_CP100601.1 Protein Homology CDS 785852 786931 . + 0 ID=cds-WP_004144748.1;Parent=gene-NLI98_RS03880;Dbxref=Genbank:WP_004144748.1;Name=WP_004144748.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016505616.1;locus_tag=NLI98_RS03880;product=class II fructose-bisphosphate aldolase;protein_id=WP_004144748.1;transl_table=11 NZ_CP100601.1 RefSeq gene 787122 787979 . + . ID=gene-NLI98_RS03885;Name=NLI98_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03885;old_locus_tag=NLI98_03885 NZ_CP100601.1 Protein Homology CDS 787122 787979 . + 0 ID=cds-WP_002916504.1;Parent=gene-NLI98_RS03885;Dbxref=Genbank:WP_002916504.1;Name=WP_002916504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228719.1;locus_tag=NLI98_RS03885;product=small-conductance mechanosensitive channel MscS;protein_id=WP_002916504.1;transl_table=11 NZ_CP100601.1 RefSeq gene 788131 788766 . + . ID=gene-NLI98_RS03890;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=NLI98_RS03890;old_locus_tag=NLI98_03890 NZ_CP100601.1 Protein Homology CDS 788131 788766 . + 0 ID=cds-WP_004144747.1;Parent=gene-NLI98_RS03890;Dbxref=Genbank:WP_004144747.1;Name=WP_004144747.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417398.1;locus_tag=NLI98_RS03890;product=arginine exporter ArgO;protein_id=WP_004144747.1;transl_table=11 NZ_CP100601.1 RefSeq gene 788856 789623 . + . ID=gene-NLI98_RS03895;Name=NLI98_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03895;old_locus_tag=NLI98_03895 NZ_CP100601.1 Protein Homology CDS 788856 789623 . + 0 ID=cds-WP_088498563.1;Parent=gene-NLI98_RS03895;Dbxref=Genbank:WP_088498563.1;Name=WP_088498563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228716.1;locus_tag=NLI98_RS03895;product=oxidative stress defense protein;protein_id=WP_088498563.1;transl_table=11 NZ_CP100601.1 RefSeq gene 789677 790570 . - . ID=gene-NLI98_RS03900;Name=argP;gbkey=Gene;gene=argP;gene_biotype=protein_coding;locus_tag=NLI98_RS03900;old_locus_tag=NLI98_03900 NZ_CP100601.1 Protein Homology CDS 789677 790570 . - 0 ID=cds-WP_032425244.1;Parent=gene-NLI98_RS03900;Dbxref=Genbank:WP_032425244.1;Name=WP_032425244.1;gbkey=CDS;gene=argP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228715.1;locus_tag=NLI98_RS03900;product=DNA-binding transcriptional regulator ArgP;protein_id=WP_032425244.1;transl_table=11 NZ_CP100601.1 RefSeq gene 790738 791397 . + . ID=gene-NLI98_RS03905;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=NLI98_RS03905;old_locus_tag=NLI98_03905 NZ_CP100601.1 Protein Homology CDS 790738 791397 . + 0 ID=cds-WP_002916495.1;Parent=gene-NLI98_RS03905;Dbxref=Genbank:WP_002916495.1;Name=WP_002916495.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228714.1;locus_tag=NLI98_RS03905;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_002916495.1;transl_table=11 NZ_CP100601.1 RefSeq gene 791667 792899 . + . ID=gene-NLI98_RS03910;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=NLI98_RS03910;old_locus_tag=NLI98_03910 NZ_CP100601.1 Protein Homology CDS 791667 792899 . + 0 ID=cds-WP_002916493.1;Parent=gene-NLI98_RS03910;Dbxref=Genbank:WP_002916493.1;Name=WP_002916493.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228712.1;locus_tag=NLI98_RS03910;product=phosphoglycerate dehydrogenase;protein_id=WP_002916493.1;transl_table=11 NZ_CP100601.1 RefSeq gene 792983 793579 . - . ID=gene-NLI98_RS03915;Name=NLI98_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03915;old_locus_tag=NLI98_03915 NZ_CP100601.1 Protein Homology CDS 792983 793579 . - 0 ID=cds-WP_002916490.1;Parent=gene-NLI98_RS03915;Dbxref=Genbank:WP_002916490.1;Name=WP_002916490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228711.1;locus_tag=NLI98_RS03915;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_002916490.1;transl_table=11 NZ_CP100601.1 RefSeq gene 793678 793861 . - . ID=gene-NLI98_RS03920;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=NLI98_RS03920;old_locus_tag=NLI98_03920 NZ_CP100601.1 cmsearch ncRNA 793678 793861 . - . ID=rna-NLI98_RS03920;Parent=gene-NLI98_RS03920;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS03920;product=6S RNA NZ_CP100601.1 cmsearch exon 793678 793861 . - . ID=exon-NLI98_RS03920-1;Parent=rna-NLI98_RS03920;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS03920;product=6S RNA NZ_CP100601.1 RefSeq gene 793903 794232 . - . ID=gene-NLI98_RS03925;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=NLI98_RS03925;old_locus_tag=NLI98_03925 NZ_CP100601.1 Protein Homology CDS 793903 794232 . - 0 ID=cds-WP_002916488.1;Parent=gene-NLI98_RS03925;Dbxref=Genbank:WP_002916488.1;Name=WP_002916488.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461976.1;locus_tag=NLI98_RS03925;product=cell division protein ZapA;protein_id=WP_002916488.1;transl_table=11 NZ_CP100601.1 RefSeq gene 794399 794977 . + . ID=gene-NLI98_RS03930;Name=NLI98_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03930;old_locus_tag=NLI98_03930 NZ_CP100601.1 Protein Homology CDS 794399 794977 . + 0 ID=cds-WP_002916486.1;Parent=gene-NLI98_RS03930;Dbxref=Genbank:WP_002916486.1;Name=WP_002916486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708672.2;locus_tag=NLI98_RS03930;product=YecA family protein;protein_id=WP_002916486.1;transl_table=11 NZ_CP100601.1 RefSeq gene 795001 796317 . + . ID=gene-NLI98_RS03935;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=NLI98_RS03935;old_locus_tag=NLI98_03935 NZ_CP100601.1 Protein Homology CDS 795001 796317 . + 0 ID=cds-WP_004193720.1;Parent=gene-NLI98_RS03935;Dbxref=Genbank:WP_004193720.1;Name=WP_004193720.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228709.1;locus_tag=NLI98_RS03935;product=Xaa-Pro aminopeptidase;protein_id=WP_004193720.1;transl_table=11 NZ_CP100601.1 RefSeq gene 796314 797492 . + . ID=gene-NLI98_RS03940;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=NLI98_RS03940;old_locus_tag=NLI98_03940 NZ_CP100601.1 Protein Homology CDS 796314 797492 . + 0 ID=cds-WP_004181247.1;Parent=gene-NLI98_RS03940;Dbxref=Genbank:WP_004181247.1;Name=WP_004181247.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228708.1;locus_tag=NLI98_RS03940;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_004181247.1;transl_table=11 NZ_CP100601.1 RefSeq gene 797503 798705 . + . ID=gene-NLI98_RS03945;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=NLI98_RS03945;old_locus_tag=NLI98_03945 NZ_CP100601.1 Protein Homology CDS 797503 798705 . + 0 ID=cds-WP_002916481.1;Parent=gene-NLI98_RS03945;Dbxref=Genbank:WP_002916481.1;Name=WP_002916481.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228707.1;locus_tag=NLI98_RS03945;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_002916481.1;transl_table=11 NZ_CP100601.1 RefSeq gene 799128 800222 . + . ID=gene-NLI98_RS03950;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=NLI98_RS03950;old_locus_tag=NLI98_03950 NZ_CP100601.1 Protein Homology CDS 799128 800222 . + 0 ID=cds-WP_002916480.1;Parent=gene-NLI98_RS03950;Dbxref=Genbank:WP_002916480.1;Name=WP_002916480.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228706.1;locus_tag=NLI98_RS03950;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_002916480.1;transl_table=11 NZ_CP100601.1 RefSeq gene 800247 800636 . + . ID=gene-NLI98_RS03955;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=NLI98_RS03955;old_locus_tag=NLI98_03955 NZ_CP100601.1 Protein Homology CDS 800247 800636 . + 0 ID=cds-WP_002916479.1;Parent=gene-NLI98_RS03955;Dbxref=Genbank:WP_002916479.1;Name=WP_002916479.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1;locus_tag=NLI98_RS03955;product=glycine cleavage system protein GcvH;protein_id=WP_002916479.1;transl_table=11 NZ_CP100601.1 RefSeq gene 800843 803716 . + . ID=gene-NLI98_RS03960;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=NLI98_RS03960;old_locus_tag=NLI98_03960 NZ_CP100601.1 Protein Homology CDS 800843 803716 . + 0 ID=cds-WP_088498562.1;Parent=gene-NLI98_RS03960;Dbxref=Genbank:WP_088498562.1;Name=WP_088498562.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457610.1;locus_tag=NLI98_RS03960;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_088498562.1;transl_table=11 NZ_CP100601.1 RefSeq gene 803779 804522 . + . ID=gene-NLI98_RS03965;Name=NLI98_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03965;old_locus_tag=NLI98_03965 NZ_CP100601.1 Protein Homology CDS 803779 804522 . + 0 ID=cds-WP_004215074.1;Parent=gene-NLI98_RS03965;Dbxref=Genbank:WP_004215074.1;Name=WP_004215074.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228703.1;locus_tag=NLI98_RS03965;product=SDR family oxidoreductase;protein_id=WP_004215074.1;transl_table=11 NZ_CP100601.1 RefSeq gene 804633 805136 . - . ID=gene-NLI98_RS03970;Name=NLI98_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03970;old_locus_tag=NLI98_03970 NZ_CP100601.1 Protein Homology CDS 804633 805136 . - 0 ID=cds-WP_023328358.1;Parent=gene-NLI98_RS03970;Dbxref=Genbank:WP_023328358.1;Name=WP_023328358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228702.1;locus_tag=NLI98_RS03970;product=protein disulfide oxidoreductase;protein_id=WP_023328358.1;transl_table=11 NZ_CP100601.1 RefSeq gene 805126 805737 . - . ID=gene-NLI98_RS03975;Name=NLI98_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03975;old_locus_tag=NLI98_03975 NZ_CP100601.1 Protein Homology CDS 805126 805737 . - 0 ID=cds-WP_002916474.1;Parent=gene-NLI98_RS03975;Dbxref=Genbank:WP_002916474.1;Name=WP_002916474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228701.1;locus_tag=NLI98_RS03975;product=thioredoxin domain-containing protein;protein_id=WP_002916474.1;transl_table=11 NZ_CP100601.1 RefSeq gene 805739 807748 . - . ID=gene-NLI98_RS03980;Name=NLI98_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03980;old_locus_tag=NLI98_03980 NZ_CP100601.1 Protein Homology CDS 805739 807748 . - 0 ID=cds-WP_048288987.1;Parent=gene-NLI98_RS03980;Dbxref=Genbank:WP_048288987.1;Name=WP_048288987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228700.1;locus_tag=NLI98_RS03980;product=protein-disulfide reductase DsbD family protein;protein_id=WP_048288987.1;transl_table=11 NZ_CP100601.1 RefSeq gene 807798 808157 . - . ID=gene-NLI98_RS03985;Name=NLI98_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03985;old_locus_tag=NLI98_03985 NZ_CP100601.1 Protein Homology CDS 807798 808157 . - 0 ID=cds-WP_004210062.1;Parent=gene-NLI98_RS03985;Dbxref=Genbank:WP_004210062.1;Name=WP_004210062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228699.1;locus_tag=NLI98_RS03985;product=hypothetical protein;protein_id=WP_004210062.1;transl_table=11 NZ_CP100601.1 RefSeq gene 808321 809715 . - . ID=gene-NLI98_RS03990;Name=NLI98_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03990;old_locus_tag=NLI98_03990 NZ_CP100601.1 Protein Homology CDS 808321 809715 . - 0 ID=cds-WP_264452111.1;Parent=gene-NLI98_RS03990;Dbxref=Genbank:WP_264452111.1;Name=WP_264452111.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228698.1;locus_tag=NLI98_RS03990;product=6-phospho-beta-glucosidase;protein_id=WP_264452111.1;transl_table=11 NZ_CP100601.1 RefSeq gene 809834 810562 . - . ID=gene-NLI98_RS03995;Name=NLI98_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS03995;old_locus_tag=NLI98_03995 NZ_CP100601.1 Protein Homology CDS 809834 810562 . - 0 ID=cds-WP_002916321.1;Parent=gene-NLI98_RS03995;Dbxref=Genbank:WP_002916321.1;Name=WP_002916321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228697.1;locus_tag=NLI98_RS03995;product=MurR/RpiR family transcriptional regulator;protein_id=WP_002916321.1;transl_table=11 NZ_CP100601.1 RefSeq gene 810612 810923 . + . ID=gene-NLI98_RS04000;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=NLI98_RS04000;old_locus_tag=NLI98_04000 NZ_CP100601.1 Protein Homology CDS 810612 810923 . + 0 ID=cds-WP_004144734.1;Parent=gene-NLI98_RS04000;Dbxref=Genbank:WP_004144734.1;Name=WP_004144734.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228696.1;locus_tag=NLI98_RS04000;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_004144734.1;transl_table=11 NZ_CP100601.1 RefSeq gene 811087 811746 . + . ID=gene-NLI98_RS04005;Name=NLI98_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04005;old_locus_tag=NLI98_04005 NZ_CP100601.1 Protein Homology CDS 811087 811746 . + 0 ID=cds-WP_002916317.1;Parent=gene-NLI98_RS04005;Dbxref=Genbank:WP_002916317.1;Name=WP_002916317.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228695.1;locus_tag=NLI98_RS04005;product=hemolysin III family protein;protein_id=WP_002916317.1;transl_table=11 NZ_CP100601.1 RefSeq gene 811897 812880 . - . ID=gene-NLI98_RS04010;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=NLI98_RS04010;old_locus_tag=NLI98_04010 NZ_CP100601.1 Protein Homology CDS 811897 812880 . - 0 ID=cds-WP_023286864.1;Parent=gene-NLI98_RS04010;Dbxref=Genbank:WP_023286864.1;Name=WP_023286864.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228694.1;locus_tag=NLI98_RS04010;product=tRNA-modifying protein YgfZ;protein_id=WP_023286864.1;transl_table=11 NZ_CP100601.1 RefSeq gene 813126 813392 . + . ID=gene-NLI98_RS04015;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=NLI98_RS04015;old_locus_tag=NLI98_04015 NZ_CP100601.1 Protein Homology CDS 813126 813392 . + 0 ID=cds-WP_002916312.1;Parent=gene-NLI98_RS04015;Dbxref=Genbank:WP_002916312.1;Name=WP_002916312.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000354044.1;locus_tag=NLI98_RS04015;product=FAD assembly factor SdhE;protein_id=WP_002916312.1;transl_table=11 NZ_CP100601.1 RefSeq gene 813373 813783 . + . ID=gene-NLI98_RS04020;Name=NLI98_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04020;old_locus_tag=NLI98_04020 NZ_CP100601.1 Protein Homology CDS 813373 813783 . + 0 ID=cds-WP_002916310.1;Parent=gene-NLI98_RS04020;Dbxref=Genbank:WP_002916310.1;Name=WP_002916310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228692.1;locus_tag=NLI98_RS04020;product=protein YgfX;protein_id=WP_002916310.1;transl_table=11 NZ_CP100601.1 RefSeq gene 813790 814311 . - . ID=gene-NLI98_RS04025;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=NLI98_RS04025;old_locus_tag=NLI98_04025 NZ_CP100601.1 Protein Homology CDS 813790 814311 . - 0 ID=cds-WP_004144730.1;Parent=gene-NLI98_RS04025;Dbxref=Genbank:WP_004144730.1;Name=WP_004144730.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228691.1;locus_tag=NLI98_RS04025;product=flavodoxin FldB;protein_id=WP_004144730.1;transl_table=11 NZ_CP100601.1 RefSeq gene 814412 815308 . + . ID=gene-NLI98_RS04030;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=NLI98_RS04030;old_locus_tag=NLI98_04030 NZ_CP100601.1 Protein Homology CDS 814412 815308 . + 0 ID=cds-WP_004144729.1;Parent=gene-NLI98_RS04030;Dbxref=Genbank:WP_004144729.1;Name=WP_004144729.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228690.1;locus_tag=NLI98_RS04030;product=site-specific tyrosine recombinase XerD;protein_id=WP_004144729.1;transl_table=11 NZ_CP100601.1 RefSeq gene 815331 816044 . + . ID=gene-NLI98_RS04035;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=NLI98_RS04035;old_locus_tag=NLI98_04035 NZ_CP100601.1 Protein Homology CDS 815331 816044 . + 0 ID=cds-WP_002916301.1;Parent=gene-NLI98_RS04035;Dbxref=Genbank:WP_002916301.1;Name=WP_002916301.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228689.1;locus_tag=NLI98_RS04035;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_002916301.1;transl_table=11 NZ_CP100601.1 RefSeq gene 816050 817783 . + . ID=gene-NLI98_RS04040;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=NLI98_RS04040;old_locus_tag=NLI98_04040 NZ_CP100601.1 Protein Homology CDS 816050 817783 . + 0 ID=cds-WP_088498560.1;Parent=gene-NLI98_RS04040;Dbxref=Genbank:WP_088498560.1;Name=WP_088498560.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228688.1;locus_tag=NLI98_RS04040;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_088498560.1;transl_table=11 NZ_CP100601.1 RefSeq gene 817869 818967 . + . ID=gene-NLI98_RS04045;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=NLI98_RS04045;old_locus_tag=NLI98_04045 NZ_CP100601.1 Protein Homology CDS 817869 817943 . + 0 ID=cds-WP_095858446.1;Parent=gene-NLI98_RS04045;Dbxref=Genbank:WP_095858446.1;Name=WP_095858446.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=NLI98_RS04045;product=peptide chain release factor 2;protein_id=WP_095858446.1;transl_table=11 NZ_CP100601.1 Protein Homology CDS 817945 818967 . + 0 ID=cds-WP_095858446.1;Parent=gene-NLI98_RS04045;Dbxref=Genbank:WP_095858446.1;Name=WP_095858446.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=NLI98_RS04045;product=peptide chain release factor 2;protein_id=WP_095858446.1;transl_table=11 NZ_CP100601.1 RefSeq gene 818977 820494 . + . ID=gene-NLI98_RS04050;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=NLI98_RS04050;old_locus_tag=NLI98_04050 NZ_CP100601.1 Protein Homology CDS 818977 820494 . + 0 ID=cds-WP_002916299.1;Parent=gene-NLI98_RS04050;Dbxref=Genbank:WP_002916299.1;Name=WP_002916299.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=NLI98_RS04050;product=lysine--tRNA ligase;protein_id=WP_002916299.1;transl_table=11 NZ_CP100601.1 RefSeq gene 820729 821283 . - . ID=gene-NLI98_RS04055;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=NLI98_RS04055;old_locus_tag=NLI98_04055 NZ_CP100601.1 Protein Homology CDS 820729 821283 . - 0 ID=cds-WP_002916298.1;Parent=gene-NLI98_RS04055;Dbxref=Genbank:WP_002916298.1;Name=WP_002916298.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228685.1;locus_tag=NLI98_RS04055;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_002916298.1;transl_table=11 NZ_CP100601.1 RefSeq gene 821600 822313 . + . ID=gene-NLI98_RS04060;Name=actS;gbkey=Gene;gene=actS;gene_biotype=protein_coding;locus_tag=NLI98_RS04060;old_locus_tag=NLI98_04060 NZ_CP100601.1 Protein Homology CDS 821600 822313 . + 0 ID=cds-WP_004157874.1;Parent=gene-NLI98_RS04060;Dbxref=Genbank:WP_004157874.1;Name=WP_004157874.1;gbkey=CDS;gene=actS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228683.1;locus_tag=NLI98_RS04060;product=amidase activator ActS;protein_id=WP_004157874.1;transl_table=11 NZ_CP100601.1 RefSeq gene 822394 822467 . + . ID=gene-NLI98_RS04065;Name=NLI98_RS04065;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS04065;old_locus_tag=NLI98_04065 NZ_CP100601.1 tRNAscan-SE tRNA 822394 822467 . + . ID=rna-NLI98_RS04065;Parent=gene-NLI98_RS04065;anticodon=(pos:822426..822428);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS04065;product=tRNA-Gly NZ_CP100601.1 tRNAscan-SE exon 822394 822467 . + . ID=exon-NLI98_RS04065-1;Parent=rna-NLI98_RS04065;anticodon=(pos:822426..822428);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS04065;product=tRNA-Gly NZ_CP100601.1 RefSeq gene 822622 824229 . + . ID=gene-NLI98_RS04070;Name=NLI98_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04070;old_locus_tag=NLI98_04070 NZ_CP100601.1 Protein Homology CDS 822622 824229 . + 0 ID=cds-WP_231838887.1;Parent=gene-NLI98_RS04070;Dbxref=Genbank:WP_231838887.1;Name=WP_231838887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004149745.1;locus_tag=NLI98_RS04070;product=tyrosine-type recombinase/integrase;protein_id=WP_231838887.1;transl_table=11 NZ_CP100601.1 RefSeq gene 824230 824862 . + . ID=gene-NLI98_RS04075;Name=NLI98_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04075;old_locus_tag=NLI98_04075 NZ_CP100601.1 Protein Homology CDS 824230 824862 . + 0 ID=cds-WP_000290523.1;Parent=gene-NLI98_RS04075;Dbxref=Genbank:WP_000290523.1;Name=WP_000290523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540599.1;locus_tag=NLI98_RS04075;product=DUF4145 domain-containing protein;protein_id=WP_000290523.1;transl_table=11 NZ_CP100601.1 RefSeq gene 825961 826452 . + . ID=gene-NLI98_RS04080;Name=NLI98_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04080;old_locus_tag=NLI98_04080 NZ_CP100601.1 Protein Homology CDS 825961 826452 . + 0 ID=cds-WP_000070869.1;Parent=gene-NLI98_RS04080;Dbxref=Genbank:WP_000070869.1;Name=WP_000070869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000070869.1;locus_tag=NLI98_RS04080;product=hypothetical protein;protein_id=WP_000070869.1;transl_table=11 NZ_CP100601.1 RefSeq gene 826827 827237 . + . ID=gene-NLI98_RS04085;Name=NLI98_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04085;old_locus_tag=NLI98_04085 NZ_CP100601.1 Protein Homology CDS 826827 827237 . + 0 ID=cds-WP_077070082.1;Parent=gene-NLI98_RS04085;Dbxref=Genbank:WP_077070082.1;Name=WP_077070082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000028499.1;locus_tag=NLI98_RS04085;product=hypothetical protein;protein_id=WP_077070082.1;transl_table=11 NZ_CP100601.1 RefSeq gene 827332 828459 . + . ID=gene-NLI98_RS04090;Name=NLI98_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04090;old_locus_tag=NLI98_04090 NZ_CP100601.1 Protein Homology CDS 827332 828459 . + 0 ID=cds-WP_046623734.1;Parent=gene-NLI98_RS04090;Dbxref=Genbank:WP_046623734.1;Name=WP_046623734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001115414.1;locus_tag=NLI98_RS04090;product=hypothetical protein;protein_id=WP_046623734.1;transl_table=11 NZ_CP100601.1 RefSeq gene 829066 830454 . - . ID=gene-NLI98_RS04095;Name=NLI98_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04095;old_locus_tag=NLI98_04095 NZ_CP100601.1 Protein Homology CDS 829066 830454 . - 0 ID=cds-WP_004174490.1;Parent=gene-NLI98_RS04095;Dbxref=Genbank:WP_004174490.1;Name=WP_004174490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228682.1;locus_tag=NLI98_RS04095;product=MFS transporter;protein_id=WP_004174490.1;transl_table=11 NZ_CP100601.1 RefSeq gene 830584 831513 . + . ID=gene-NLI98_RS04100;Name=NLI98_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04100;old_locus_tag=NLI98_04100 NZ_CP100601.1 Protein Homology CDS 830584 831513 . + 0 ID=cds-WP_040089665.1;Parent=gene-NLI98_RS04100;Dbxref=Genbank:WP_040089665.1;Name=WP_040089665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228681.1;locus_tag=NLI98_RS04100;product=LysR family transcriptional regulator;protein_id=WP_040089665.1;transl_table=11 NZ_CP100601.1 RefSeq gene 831877 832680 . - . ID=gene-NLI98_RS04105;Name=NLI98_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04105;old_locus_tag=NLI98_04105 NZ_CP100601.1 Protein Homology CDS 831877 832680 . - 0 ID=cds-WP_002916291.1;Parent=gene-NLI98_RS04105;Dbxref=Genbank:WP_002916291.1;Name=WP_002916291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228680.1;locus_tag=NLI98_RS04105;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_002916291.1;transl_table=11 NZ_CP100601.1 RefSeq gene 832713 833732 . - . ID=gene-NLI98_RS04110;Name=NLI98_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04110;old_locus_tag=NLI98_04110 NZ_CP100601.1 Protein Homology CDS 832713 833732 . - 0 ID=cds-WP_042937673.1;Parent=gene-NLI98_RS04110;Dbxref=Genbank:WP_042937673.1;Name=WP_042937673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228679.1;locus_tag=NLI98_RS04110;product=aldo/keto reductase;protein_id=WP_042937673.1;transl_table=11 NZ_CP100601.1 RefSeq gene 833753 834310 . - . ID=gene-NLI98_RS04115;Name=NLI98_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04115;old_locus_tag=NLI98_04115 NZ_CP100601.1 Protein Homology CDS 833753 834310 . - 0 ID=cds-WP_042937672.1;Parent=gene-NLI98_RS04115;Dbxref=Genbank:WP_042937672.1;Name=WP_042937672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228678.1;locus_tag=NLI98_RS04115;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_042937672.1;transl_table=11 NZ_CP100601.1 RefSeq gene 834319 834627 . - . ID=gene-NLI98_RS04120;Name=NLI98_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04120;old_locus_tag=NLI98_04120 NZ_CP100601.1 Protein Homology CDS 834319 834627 . - 0 ID=cds-WP_004151785.1;Parent=gene-NLI98_RS04120;Dbxref=Genbank:WP_004151785.1;Name=WP_004151785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228677.1;locus_tag=NLI98_RS04120;product=superoxide dismutase;protein_id=WP_004151785.1;transl_table=11 NZ_CP100601.1 RefSeq gene 834766 835665 . + . ID=gene-NLI98_RS04125;Name=NLI98_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04125;old_locus_tag=NLI98_04125 NZ_CP100601.1 Protein Homology CDS 834766 835665 . + 0 ID=cds-WP_004174493.1;Parent=gene-NLI98_RS04125;Dbxref=Genbank:WP_004174493.1;Name=WP_004174493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014906955.1;locus_tag=NLI98_RS04125;product=LysR family transcriptional regulator;protein_id=WP_004174493.1;transl_table=11 NZ_CP100601.1 RefSeq gene 835834 836037 . - . ID=gene-NLI98_RS04130;Name=NLI98_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04130;old_locus_tag=NLI98_04130 NZ_CP100601.1 Protein Homology CDS 835834 836037 . - 0 ID=cds-WP_014599254.1;Parent=gene-NLI98_RS04130;Dbxref=Genbank:WP_014599254.1;Name=WP_014599254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014599254.1;locus_tag=NLI98_RS04130;product=hypothetical protein;protein_id=WP_014599254.1;transl_table=11 NZ_CP100601.1 RefSeq gene 836116 836688 . - . ID=gene-NLI98_RS04135;Name=NLI98_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04135;old_locus_tag=NLI98_04135 NZ_CP100601.1 Protein Homology CDS 836116 836688 . - 0 ID=cds-WP_009308609.1;Parent=gene-NLI98_RS04135;Dbxref=Genbank:WP_009308609.1;Name=WP_009308609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228675.1;locus_tag=NLI98_RS04135;product=DUF1349 domain-containing protein;protein_id=WP_009308609.1;transl_table=11 NZ_CP100601.1 RefSeq gene 836719 837012 . - . ID=gene-NLI98_RS04140;Name=NLI98_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04140;old_locus_tag=NLI98_04140 NZ_CP100601.1 Protein Homology CDS 836719 837012 . - 0 ID=cds-WP_002916282.1;Parent=gene-NLI98_RS04140;Dbxref=Genbank:WP_002916282.1;Name=WP_002916282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228674.1;locus_tag=NLI98_RS04140;product=YciI family protein;protein_id=WP_002916282.1;transl_table=11 NZ_CP100601.1 RefSeq gene 837231 837560 . + . ID=gene-NLI98_RS04145;Name=NLI98_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04145;old_locus_tag=NLI98_04145 NZ_CP100601.1 Protein Homology CDS 837231 837560 . + 0 ID=cds-WP_009308608.1;Parent=gene-NLI98_RS04145;Dbxref=Genbank:WP_009308608.1;Name=WP_009308608.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228673.1;locus_tag=NLI98_RS04145;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_009308608.1;transl_table=11 NZ_CP100601.1 RefSeq gene 837612 838904 . + . ID=gene-NLI98_RS04150;Name=NLI98_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04150;old_locus_tag=NLI98_04150 NZ_CP100601.1 Protein Homology CDS 837612 838904 . + 0 ID=cds-WP_009308607.1;Parent=gene-NLI98_RS04150;Dbxref=Genbank:WP_009308607.1;Name=WP_009308607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228672.1;locus_tag=NLI98_RS04150;product=arsenic transporter;protein_id=WP_009308607.1;transl_table=11 NZ_CP100601.1 RefSeq gene 838914 839336 . + . ID=gene-NLI98_RS04155;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=NLI98_RS04155;old_locus_tag=NLI98_04155 NZ_CP100601.1 Protein Homology CDS 838914 839336 . + 0 ID=cds-WP_009308606.1;Parent=gene-NLI98_RS04155;Dbxref=Genbank:WP_009308606.1;Name=WP_009308606.1;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228671.1;locus_tag=NLI98_RS04155;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_009308606.1;transl_table=11 NZ_CP100601.1 RefSeq gene 839809 841362 . + . ID=gene-NLI98_RS04160;Name=NLI98_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04160;old_locus_tag=NLI98_04160 NZ_CP100601.1 Protein Homology CDS 839809 841362 . + 0 ID=cds-WP_002916277.1;Parent=gene-NLI98_RS04160;Dbxref=Genbank:WP_002916277.1;Name=WP_002916277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228670.1;locus_tag=NLI98_RS04160;product=peptide MFS transporter;protein_id=WP_002916277.1;transl_table=11 NZ_CP100601.1 RefSeq gene 841547 841846 . + . ID=gene-NLI98_RS04165;Name=NLI98_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04165;old_locus_tag=NLI98_04165 NZ_CP100601.1 Protein Homology CDS 841547 841846 . + 0 ID=cds-WP_002916274.1;Parent=gene-NLI98_RS04165;Dbxref=Genbank:WP_002916274.1;Name=WP_002916274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228669.1;locus_tag=NLI98_RS04165;product=DUF1889 family protein;protein_id=WP_002916274.1;transl_table=11 NZ_CP100601.1 RefSeq gene 841909 843357 . - . ID=gene-NLI98_RS04170;Name=NLI98_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04170;old_locus_tag=NLI98_04170 NZ_CP100601.1 Protein Homology CDS 841909 843357 . - 0 ID=cds-WP_009308604.1;Parent=gene-NLI98_RS04170;Dbxref=Genbank:WP_009308604.1;Name=WP_009308604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228668.1;locus_tag=NLI98_RS04170;product=MdtP family multidrug efflux transporter outer membrane subunit;protein_id=WP_009308604.1;transl_table=11 NZ_CP100601.1 RefSeq gene 843354 845291 . - . ID=gene-NLI98_RS04175;Name=mdtO;gbkey=Gene;gene=mdtO;gene_biotype=protein_coding;locus_tag=NLI98_RS04175;old_locus_tag=NLI98_04175 NZ_CP100601.1 Protein Homology CDS 843354 845291 . - 0 ID=cds-WP_023285535.1;Parent=gene-NLI98_RS04175;Dbxref=Genbank:WP_023285535.1;Name=WP_023285535.1;gbkey=CDS;gene=mdtO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228667.1;locus_tag=NLI98_RS04175;product=multidrug efflux transporter permease subunit MdtO;protein_id=WP_023285535.1;transl_table=11 NZ_CP100601.1 RefSeq gene 845304 846329 . - . ID=gene-NLI98_RS04180;Name=mdtN;gbkey=Gene;gene=mdtN;gene_biotype=protein_coding;locus_tag=NLI98_RS04180;old_locus_tag=NLI98_04180 NZ_CP100601.1 Protein Homology CDS 845304 846329 . - 0 ID=cds-WP_004174502.1;Parent=gene-NLI98_RS04180;Dbxref=Genbank:WP_004174502.1;Name=WP_004174502.1;gbkey=CDS;gene=mdtN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228666.1;locus_tag=NLI98_RS04180;product=multidrug transporter subunit MdtN;protein_id=WP_004174502.1;transl_table=11 NZ_CP100601.1 RefSeq gene 846336 846608 . - . ID=gene-NLI98_RS04185;Name=NLI98_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04185;old_locus_tag=NLI98_04185 NZ_CP100601.1 Protein Homology CDS 846336 846608 . - 0 ID=cds-WP_002916204.1;Parent=gene-NLI98_RS04185;Dbxref=Genbank:WP_002916204.1;Name=WP_002916204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228665.1;locus_tag=NLI98_RS04185;product=YtcA family lipoprotein;protein_id=WP_002916204.1;transl_table=11 NZ_CP100601.1 RefSeq gene 846814 847044 . + . ID=gene-NLI98_RS04190;Name=NLI98_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04190;old_locus_tag=NLI98_04190 NZ_CP100601.1 Protein Homology CDS 846814 847044 . + 0 ID=cds-WP_002916202.1;Parent=gene-NLI98_RS04190;Dbxref=Genbank:WP_002916202.1;Name=WP_002916202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313135.1;locus_tag=NLI98_RS04190;product=(4Fe-4S)-binding protein;protein_id=WP_002916202.1;transl_table=11 NZ_CP100601.1 RefSeq gene 847056 847328 . + . ID=gene-NLI98_RS04195;Name=NLI98_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04195;old_locus_tag=NLI98_04195 NZ_CP100601.1 Protein Homology CDS 847056 847328 . + 0 ID=cds-WP_002916201.1;Parent=gene-NLI98_RS04195;Dbxref=Genbank:WP_002916201.1;Name=WP_002916201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228663.1;locus_tag=NLI98_RS04195;product=GNAT family N-acetyltransferase;protein_id=WP_002916201.1;transl_table=11 NZ_CP100601.1 RefSeq gene 847371 848783 . - . ID=gene-NLI98_RS04200;Name=NLI98_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04200;old_locus_tag=NLI98_04200 NZ_CP100601.1 Protein Homology CDS 847371 848783 . - 0 ID=cds-WP_064146039.1;Parent=gene-NLI98_RS04200;Dbxref=Genbank:WP_064146039.1;Name=WP_064146039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004889889.1;locus_tag=NLI98_RS04200;product=EAL domain-containing protein;protein_id=WP_064146039.1;transl_table=11 NZ_CP100601.1 RefSeq gene 848780 849685 . - . ID=gene-NLI98_RS04205;Name=NLI98_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04205;old_locus_tag=NLI98_04205 NZ_CP100601.1 Protein Homology CDS 848780 849685 . - 0 ID=cds-WP_004151788.1;Parent=gene-NLI98_RS04205;Dbxref=Genbank:WP_004151788.1;Name=WP_004151788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313306.1;locus_tag=NLI98_RS04205;product=fimbrial protein;protein_id=WP_004151788.1;transl_table=11 NZ_CP100601.1 RefSeq gene 849703 850188 . - . ID=gene-NLI98_RS04210;Name=NLI98_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04210;old_locus_tag=NLI98_04210 NZ_CP100601.1 Protein Homology CDS 849703 850188 . - 0 ID=cds-WP_004229447.1;Parent=gene-NLI98_RS04210;Dbxref=Genbank:WP_004229447.1;Name=WP_004229447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228660.1;locus_tag=NLI98_RS04210;product=type 1 fimbrial protein;protein_id=WP_004229447.1;transl_table=11 NZ_CP100601.1 RefSeq gene 850216 850743 . - . ID=gene-NLI98_RS04215;Name=NLI98_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04215;old_locus_tag=NLI98_04215 NZ_CP100601.1 Protein Homology CDS 850216 850743 . - 0 ID=cds-WP_019705553.1;Parent=gene-NLI98_RS04215;Dbxref=Genbank:WP_019705553.1;Name=WP_019705553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228659.1;locus_tag=NLI98_RS04215;product=type 1 fimbrial protein;protein_id=WP_019705553.1;transl_table=11 NZ_CP100601.1 RefSeq gene 850754 853366 . - . ID=gene-NLI98_RS04220;Name=NLI98_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04220;old_locus_tag=NLI98_04220 NZ_CP100601.1 Protein Homology CDS 850754 853366 . - 0 ID=cds-WP_009308599.1;Parent=gene-NLI98_RS04220;Dbxref=Genbank:WP_009308599.1;Name=WP_009308599.1;Ontology_term=GO:0009297,GO:0005515,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA,fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228658.1;locus_tag=NLI98_RS04220;product=fimbrial biogenesis usher protein;protein_id=WP_009308599.1;transl_table=11 NZ_CP100601.1 RefSeq gene 853448 854173 . - . ID=gene-NLI98_RS04225;Name=NLI98_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04225;old_locus_tag=NLI98_04225 NZ_CP100601.1 Protein Homology CDS 853448 854173 . - 0 ID=cds-WP_002916192.1;Parent=gene-NLI98_RS04225;Dbxref=Genbank:WP_002916192.1;Name=WP_002916192.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016161785.1;locus_tag=NLI98_RS04225;product=fimbria/pilus periplasmic chaperone;protein_id=WP_002916192.1;transl_table=11 NZ_CP100601.1 RefSeq gene 854202 854738 . - . ID=gene-NLI98_RS04230;Name=NLI98_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04230;old_locus_tag=NLI98_04230 NZ_CP100601.1 Protein Homology CDS 854202 854738 . - 0 ID=cds-WP_004174507.1;Parent=gene-NLI98_RS04230;Dbxref=Genbank:WP_004174507.1;Name=WP_004174507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228656.1;locus_tag=NLI98_RS04230;product=type 1 fimbrial protein;protein_id=WP_004174507.1;transl_table=11 NZ_CP100601.1 RefSeq gene 854809 855357 . - . ID=gene-NLI98_RS04235;Name=fimA;gbkey=Gene;gene=fimA;gene_biotype=protein_coding;locus_tag=NLI98_RS04235;old_locus_tag=NLI98_04235 NZ_CP100601.1 Protein Homology CDS 854809 855357 . - 0 ID=cds-WP_002916190.1;Parent=gene-NLI98_RS04235;Dbxref=Genbank:WP_002916190.1;Name=WP_002916190.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;gene=fimA;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228655.1;locus_tag=NLI98_RS04235;product=type 1 fimbrial major subunit FimA;protein_id=WP_002916190.1;transl_table=11 NZ_CP100601.1 RefSeq gene 855837 856445 . - . ID=gene-NLI98_RS04240;Name=fimE;gbkey=Gene;gene=fimE;gene_biotype=protein_coding;locus_tag=NLI98_RS04240;old_locus_tag=NLI98_04240 NZ_CP100601.1 Protein Homology CDS 855837 856445 . - 0 ID=cds-WP_002916189.1;Parent=gene-NLI98_RS04240;Dbxref=Genbank:WP_002916189.1;Name=WP_002916189.1;Note=upgraded from regulatory protein to switch DNA invertase;gbkey=CDS;gene=fimE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228653.1;locus_tag=NLI98_RS04240;product=type 1 fimbria switch DNA invertase FimE;protein_id=WP_002916189.1;transl_table=11 NZ_CP100601.1 RefSeq gene 856910 857515 . - . ID=gene-NLI98_RS04245;Name=fimB;gbkey=Gene;gene=fimB;gene_biotype=protein_coding;locus_tag=NLI98_RS04245;old_locus_tag=NLI98_04245 NZ_CP100601.1 Protein Homology CDS 856910 857515 . - 0 ID=cds-WP_004151951.1;Parent=gene-NLI98_RS04245;Dbxref=Genbank:WP_004151951.1;Name=WP_004151951.1;gbkey=CDS;gene=fimB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875142.1;locus_tag=NLI98_RS04245;product=type 1 fimbria switch DNA invertase FimB;protein_id=WP_004151951.1;transl_table=11 NZ_CP100601.1 RefSeq gene 858733 859689 . + . ID=gene-NLI98_RS04250;Name=NLI98_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04250;old_locus_tag=NLI98_04250 NZ_CP100601.1 Protein Homology CDS 858733 859689 . + 0 ID=cds-WP_004185517.1;Parent=gene-NLI98_RS04250;Dbxref=Genbank:WP_004185517.1;Name=WP_004185517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228651.1;locus_tag=NLI98_RS04250;product=nickel/cobalt transporter;protein_id=WP_004185517.1;transl_table=11 NZ_CP100601.1 RefSeq gene 859686 860192 . - . ID=gene-NLI98_RS04255;Name=NLI98_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04255;old_locus_tag=NLI98_04255 NZ_CP100601.1 Protein Homology CDS 859686 860192 . - 0 ID=cds-WP_002916184.1;Parent=gene-NLI98_RS04255;Dbxref=Genbank:WP_002916184.1;Name=WP_002916184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228650.1;locus_tag=NLI98_RS04255;product=MarR family transcriptional regulator;protein_id=WP_002916184.1;transl_table=11 NZ_CP100601.1 RefSeq gene 860274 861170 . + . ID=gene-NLI98_RS04260;Name=NLI98_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04260;old_locus_tag=NLI98_04260 NZ_CP100601.1 Protein Homology CDS 860274 861170 . + 0 ID=cds-WP_021464054.1;Parent=gene-NLI98_RS04260;Dbxref=Genbank:WP_021464054.1;Name=WP_021464054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228649.1;locus_tag=NLI98_RS04260;product=DMT family transporter;protein_id=WP_021464054.1;transl_table=11 NZ_CP100601.1 RefSeq gene 861266 861475 . - . ID=gene-NLI98_RS04265;Name=NLI98_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04265;old_locus_tag=NLI98_04265 NZ_CP100601.1 Protein Homology CDS 861266 861475 . - 0 ID=cds-WP_002916131.1;Parent=gene-NLI98_RS04265;Dbxref=Genbank:WP_002916131.1;Name=WP_002916131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228648.1;locus_tag=NLI98_RS04265;product=DUF1471 domain-containing protein;protein_id=WP_002916131.1;transl_table=11 NZ_CP100601.1 RefSeq gene 862181 862789 . + . ID=gene-NLI98_RS04270;Name=mrkA;gbkey=Gene;gene=mrkA;gene_biotype=protein_coding;locus_tag=NLI98_RS04270;old_locus_tag=NLI98_04270 NZ_CP100601.1 Protein Homology CDS 862181 862789 . + 0 ID=cds-WP_000756959.1;Parent=gene-NLI98_RS04270;Dbxref=Genbank:WP_000756959.1;Name=WP_000756959.1;gbkey=CDS;gene=mrkA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228647.1;locus_tag=NLI98_RS04270;product=type 3 fimbria major subunit MrkA;protein_id=WP_000756959.1;transl_table=11 NZ_CP100601.1 RefSeq gene 862885 863586 . + . ID=gene-NLI98_RS04275;Name=mrkB;gbkey=Gene;gene=mrkB;gene_biotype=protein_coding;locus_tag=NLI98_RS04275;old_locus_tag=NLI98_04275 NZ_CP100601.1 Protein Homology CDS 862885 863586 . + 0 ID=cds-WP_048995559.1;Parent=gene-NLI98_RS04275;Dbxref=Genbank:WP_048995559.1;Name=WP_048995559.1;gbkey=CDS;gene=mrkB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004211921.1;locus_tag=NLI98_RS04275;product=type 3 fimbria chaperone MrkB;protein_id=WP_048995559.1;transl_table=11 NZ_CP100601.1 RefSeq gene 863598 866084 . + . ID=gene-NLI98_RS04280;Name=mrkC;gbkey=Gene;gene=mrkC;gene_biotype=protein_coding;locus_tag=NLI98_RS04280;old_locus_tag=NLI98_04280 NZ_CP100601.1 Protein Homology CDS 863598 866084 . + 0 ID=cds-WP_000813718.1;Parent=gene-NLI98_RS04280;Dbxref=Genbank:WP_000813718.1;Name=WP_000813718.1;gbkey=CDS;gene=mrkC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228645.1;locus_tag=NLI98_RS04280;product=type 3 fimbria usher protein MrkC;protein_id=WP_000813718.1;transl_table=11 NZ_CP100601.1 RefSeq gene 866075 867070 . + . ID=gene-NLI98_RS04285;Name=mrkD;gbkey=Gene;gene=mrkD;gene_biotype=protein_coding;locus_tag=NLI98_RS04285;old_locus_tag=NLI98_04285 NZ_CP100601.1 Protein Homology CDS 866075 867070 . + 0 ID=cds-WP_002916123.1;Parent=gene-NLI98_RS04285;Dbxref=Genbank:WP_002916123.1;Name=WP_002916123.1;gbkey=CDS;gene=mrkD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228644.1;locus_tag=NLI98_RS04285;product=type 3 fimbria adhesin subunit MrkD;protein_id=WP_002916123.1;transl_table=11 NZ_CP100601.1 RefSeq gene 867084 867719 . + . ID=gene-NLI98_RS04290;Name=mrkF;gbkey=Gene;gene=mrkF;gene_biotype=protein_coding;locus_tag=NLI98_RS04290;old_locus_tag=NLI98_04290 NZ_CP100601.1 Protein Homology CDS 867084 867719 . + 0 ID=cds-WP_002916122.1;Parent=gene-NLI98_RS04290;Dbxref=Genbank:WP_002916122.1;Name=WP_002916122.1;gbkey=CDS;gene=mrkF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228643.1;locus_tag=NLI98_RS04290;product=type 3 fimbria minor subunit MrkF;protein_id=WP_002916122.1;transl_table=11 NZ_CP100601.1 RefSeq gene 867754 868470 . - . ID=gene-NLI98_RS04295;Name=mkrJ;gbkey=Gene;gene=mkrJ;gene_biotype=protein_coding;locus_tag=NLI98_RS04295;old_locus_tag=NLI98_04295 NZ_CP100601.1 Protein Homology CDS 867754 868470 . - 0 ID=cds-WP_004144002.1;Parent=gene-NLI98_RS04295;Dbxref=Genbank:WP_004144002.1;Name=WP_004144002.1;gbkey=CDS;gene=mkrJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228642.1;locus_tag=NLI98_RS04295;product=phosphodiesterase MrkJ;protein_id=WP_004144002.1;transl_table=11 NZ_CP100601.1 RefSeq gene 868614 869186 . - . ID=gene-NLI98_RS04300;Name=mrkI;gbkey=Gene;gene=mrkI;gene_biotype=protein_coding;locus_tag=NLI98_RS04300;old_locus_tag=NLI98_04300 NZ_CP100601.1 Protein Homology CDS 868614 869186 . - 0 ID=cds-WP_002916079.1;Parent=gene-NLI98_RS04300;Dbxref=Genbank:WP_002916079.1;Name=WP_002916079.1;gbkey=CDS;gene=mrkI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228641.1;locus_tag=NLI98_RS04300;product=transcriptional regulator MrkI;protein_id=WP_002916079.1;transl_table=11 NZ_CP100601.1 RefSeq gene 869204 869908 . - . ID=gene-NLI98_RS04305;Name=mrkH;gbkey=Gene;gene=mrkH;gene_biotype=protein_coding;locus_tag=NLI98_RS04305;old_locus_tag=NLI98_04305 NZ_CP100601.1 Protein Homology CDS 869204 869908 . - 0 ID=cds-WP_004152886.1;Parent=gene-NLI98_RS04305;Dbxref=Genbank:WP_004152886.1;Name=WP_004152886.1;gbkey=CDS;gene=mrkH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228640.1;locus_tag=NLI98_RS04305;product=transcriptional activator MrkH;protein_id=WP_004152886.1;transl_table=11 NZ_CP100601.1 RefSeq gene 870291 871169 . - . ID=gene-NLI98_RS04310;Name=NLI98_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04310;old_locus_tag=NLI98_04310 NZ_CP100601.1 Protein Homology CDS 870291 871169 . - 0 ID=cds-WP_002916061.1;Parent=gene-NLI98_RS04310;Dbxref=Genbank:WP_002916061.1;Name=WP_002916061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228639.1;locus_tag=NLI98_RS04310;product=aldo/keto reductase family oxidoreductase;protein_id=WP_002916061.1;transl_table=11 NZ_CP100601.1 RefSeq gene 871288 872517 . - . ID=gene-NLI98_RS04315;Name=NLI98_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04315;old_locus_tag=NLI98_04315 NZ_CP100601.1 Protein Homology CDS 871288 872517 . - 0 ID=cds-WP_002916058.1;Parent=gene-NLI98_RS04315;Dbxref=Genbank:WP_002916058.1;Name=WP_002916058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205392.1;locus_tag=NLI98_RS04315;product=amino acid permease;protein_id=WP_002916058.1;transl_table=11 NZ_CP100601.1 RefSeq gene 872641 873102 . - . ID=gene-NLI98_RS04320;Name=NLI98_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04320;old_locus_tag=NLI98_04320 NZ_CP100601.1 Protein Homology CDS 872641 873102 . - 0 ID=cds-WP_002916056.1;Parent=gene-NLI98_RS04320;Dbxref=Genbank:WP_002916056.1;Name=WP_002916056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228637.1;locus_tag=NLI98_RS04320;product=multidrug/biocide efflux PACE transporter;protein_id=WP_002916056.1;transl_table=11 NZ_CP100601.1 RefSeq gene 873205 874074 . + . ID=gene-NLI98_RS04325;Name=NLI98_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04325;old_locus_tag=NLI98_04325 NZ_CP100601.1 Protein Homology CDS 873205 874074 . + 0 ID=cds-WP_023301272.1;Parent=gene-NLI98_RS04325;Dbxref=Genbank:WP_023301272.1;Name=WP_023301272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228636.1;locus_tag=NLI98_RS04325;product=LysR family transcriptional regulator;protein_id=WP_023301272.1;transl_table=11 NZ_CP100601.1 RefSeq gene 874193 875371 . + . ID=gene-NLI98_RS04330;Name=NLI98_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04330;old_locus_tag=NLI98_04330 NZ_CP100601.1 Protein Homology CDS 874193 875371 . + 0 ID=cds-WP_088498559.1;Parent=gene-NLI98_RS04330;Dbxref=Genbank:WP_088498559.1;Name=WP_088498559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228635.1;locus_tag=NLI98_RS04330;product=acetyl-CoA C-acetyltransferase;protein_id=WP_088498559.1;transl_table=11 NZ_CP100601.1 RefSeq gene 875619 876314 . + . ID=gene-NLI98_RS04335;Name=ompK26;gbkey=Gene;gene=ompK26;gene_biotype=protein_coding;locus_tag=NLI98_RS04335;old_locus_tag=NLI98_04335 NZ_CP100601.1 Protein Homology CDS 875619 876314 . + 0 ID=cds-WP_004143995.1;Parent=gene-NLI98_RS04335;Dbxref=Genbank:WP_004143995.1;Name=WP_004143995.1;gbkey=CDS;gene=ompK26;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228634.1;locus_tag=NLI98_RS04335;product=KdgM family porin OmpK26;protein_id=WP_004143995.1;transl_table=11 NZ_CP100601.1 RefSeq gene 876449 877624 . - . ID=gene-NLI98_RS04340;Name=NLI98_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04340;old_locus_tag=NLI98_04340 NZ_CP100601.1 Protein Homology CDS 876449 877624 . - 0 ID=cds-WP_002916048.1;Parent=gene-NLI98_RS04340;Dbxref=Genbank:WP_002916048.1;Name=WP_002916048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228633.1;locus_tag=NLI98_RS04340;product=oligogalacturonate lyase family protein;protein_id=WP_002916048.1;transl_table=11 NZ_CP100601.1 RefSeq gene 877768 877899 . - . ID=gene-NLI98_RS04345;Name=NLI98_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04345 NZ_CP100601.1 GeneMarkS-2+ CDS 877768 877899 . - 0 ID=cds-WP_009485911.1;Parent=gene-NLI98_RS04345;Dbxref=Genbank:WP_009485911.1;Name=WP_009485911.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS04345;product=hypothetical protein;protein_id=WP_009485911.1;transl_table=11 NZ_CP100601.1 RefSeq gene 878110 878871 . + . ID=gene-NLI98_RS04350;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=NLI98_RS04350;old_locus_tag=NLI98_04345 NZ_CP100601.1 Protein Homology CDS 878110 878871 . + 0 ID=cds-WP_002916003.1;Parent=gene-NLI98_RS04350;Dbxref=Genbank:WP_002916003.1;Name=WP_002916003.1;Ontology_term=GO:0000272,GO:0008678,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=2-deoxy-D-gluconate 3-dehydrogenase activity|0008678||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228631.1;locus_tag=NLI98_RS04350;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_002916003.1;transl_table=11 NZ_CP100601.1 RefSeq gene 879167 880588 . + . ID=gene-NLI98_RS04355;Name=NLI98_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04355;old_locus_tag=NLI98_04350 NZ_CP100601.1 Protein Homology CDS 879167 880588 . + 0 ID=cds-WP_002916001.1;Parent=gene-NLI98_RS04355;Dbxref=Genbank:WP_002916001.1;Name=WP_002916001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004149648.1;locus_tag=NLI98_RS04355;product=sugar porter family MFS transporter;protein_id=WP_002916001.1;transl_table=11 NZ_CP100601.1 RefSeq gene 880585 881580 . - . ID=gene-NLI98_RS04360;Name=NLI98_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04360;old_locus_tag=NLI98_04355 NZ_CP100601.1 Protein Homology CDS 880585 881580 . - 0 ID=cds-WP_004149647.1;Parent=gene-NLI98_RS04360;Dbxref=Genbank:WP_004149647.1;Name=WP_004149647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228629.1;locus_tag=NLI98_RS04360;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_004149647.1;transl_table=11 NZ_CP100601.1 RefSeq gene 881675 881809 . + . ID=gene-NLI98_RS04365;Name=NLI98_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04365;old_locus_tag=NLI98_04360 NZ_CP100601.1 Protein Homology CDS 881675 881809 . + 0 ID=cds-WP_004143987.1;Parent=gene-NLI98_RS04365;Dbxref=Genbank:WP_004143987.1;Name=WP_004143987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228628.1;locus_tag=NLI98_RS04365;product=hypothetical protein;protein_id=WP_004143987.1;transl_table=11 NZ_CP100601.1 RefSeq gene 881822 883063 . + . ID=gene-NLI98_RS04370;Name=NLI98_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04370;old_locus_tag=NLI98_04365 NZ_CP100601.1 Protein Homology CDS 881822 883063 . + 0 ID=cds-WP_002916000.1;Parent=gene-NLI98_RS04370;Dbxref=Genbank:WP_002916000.1;Name=WP_002916000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228627.1;locus_tag=NLI98_RS04370;product=MFS transporter;protein_id=WP_002916000.1;transl_table=11 NZ_CP100601.1 RefSeq gene 883083 884516 . + . ID=gene-NLI98_RS04375;Name=NLI98_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04375;old_locus_tag=NLI98_04370 NZ_CP100601.1 Protein Homology CDS 883083 884516 . + 0 ID=cds-WP_040153436.1;Parent=gene-NLI98_RS04375;Dbxref=Genbank:WP_040153436.1;Name=WP_040153436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228626.1;locus_tag=NLI98_RS04375;product=glycoside hydrolase family 32 protein;protein_id=WP_040153436.1;transl_table=11 NZ_CP100601.1 RefSeq gene 884638 885981 . + . ID=gene-NLI98_RS04380;Name=NLI98_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04380;old_locus_tag=NLI98_04375 NZ_CP100601.1 Protein Homology CDS 884638 885981 . + 0 ID=cds-WP_040153425.1;Parent=gene-NLI98_RS04380;Dbxref=Genbank:WP_040153425.1;Name=WP_040153425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228625.1;locus_tag=NLI98_RS04380;product=carbohydrate porin;protein_id=WP_040153425.1;transl_table=11 NZ_CP100601.1 RefSeq gene 886041 887327 . - . ID=gene-NLI98_RS04385;Name=NLI98_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04385;old_locus_tag=NLI98_04380 NZ_CP100601.1 Protein Homology CDS 886041 887327 . - 0 ID=cds-WP_002915998.1;Parent=gene-NLI98_RS04385;Dbxref=Genbank:WP_002915998.1;Name=WP_002915998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228624.1;locus_tag=NLI98_RS04385;product=ABC transporter substrate-binding protein;protein_id=WP_002915998.1;transl_table=11 NZ_CP100601.1 RefSeq gene 887344 888471 . - . ID=gene-NLI98_RS04390;Name=NLI98_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04390;old_locus_tag=NLI98_04385 NZ_CP100601.1 Protein Homology CDS 887344 888471 . - 0 ID=cds-WP_040153423.1;Parent=gene-NLI98_RS04390;Dbxref=Genbank:WP_040153423.1;Name=WP_040153423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228623.1;locus_tag=NLI98_RS04390;product=ABC transporter ATP-binding protein;protein_id=WP_040153423.1;transl_table=11 NZ_CP100601.1 RefSeq gene 888484 889386 . - . ID=gene-NLI98_RS04395;Name=NLI98_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04395;old_locus_tag=NLI98_04390 NZ_CP100601.1 Protein Homology CDS 888484 889386 . - 0 ID=cds-WP_002915996.1;Parent=gene-NLI98_RS04395;Dbxref=Genbank:WP_002915996.1;Name=WP_002915996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228622.1;locus_tag=NLI98_RS04395;product=carbohydrate ABC transporter permease;protein_id=WP_002915996.1;transl_table=11 NZ_CP100601.1 RefSeq gene 889379 890269 . - . ID=gene-NLI98_RS04400;Name=NLI98_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04400;old_locus_tag=NLI98_04395 NZ_CP100601.1 Protein Homology CDS 889379 890269 . - 0 ID=cds-WP_002915995.1;Parent=gene-NLI98_RS04400;Dbxref=Genbank:WP_002915995.1;Name=WP_002915995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228621.1;locus_tag=NLI98_RS04400;product=sugar ABC transporter permease;protein_id=WP_002915995.1;transl_table=11 NZ_CP100601.1 RefSeq gene 890721 891047 . - . ID=gene-NLI98_RS04405;Name=NLI98_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04405;old_locus_tag=NLI98_04400 NZ_CP100601.1 Protein Homology CDS 890721 891047 . - 0 ID=cds-WP_002915993.1;Parent=gene-NLI98_RS04405;Dbxref=Genbank:WP_002915993.1;Name=WP_002915993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228620.1;locus_tag=NLI98_RS04405;product=cupin domain-containing protein;protein_id=WP_002915993.1;transl_table=11 NZ_CP100601.1 RefSeq gene 891187 891900 . + . ID=gene-NLI98_RS04410;Name=NLI98_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04410;old_locus_tag=NLI98_04405 NZ_CP100601.1 Protein Homology CDS 891187 891900 . + 0 ID=cds-WP_002915992.1;Parent=gene-NLI98_RS04410;Dbxref=Genbank:WP_002915992.1;Name=WP_002915992.1;Ontology_term=GO:0006807,GO:0016855;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228619.1;locus_tag=NLI98_RS04410;product=aspartate/glutamate racemase;protein_id=WP_002915992.1;transl_table=11 NZ_CP100601.1 RefSeq gene 891866 892792 . - . ID=gene-NLI98_RS04415;Name=NLI98_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04415;old_locus_tag=NLI98_04410 NZ_CP100601.1 Protein Homology CDS 891866 892792 . - 0 ID=cds-WP_002915991.1;Parent=gene-NLI98_RS04415;Dbxref=Genbank:WP_002915991.1;Name=WP_002915991.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228618.1;locus_tag=NLI98_RS04415;product=LysR family transcriptional regulator;protein_id=WP_002915991.1;transl_table=11 NZ_CP100601.1 RefSeq gene 892929 894191 . + . ID=gene-NLI98_RS04420;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=NLI98_RS04420;old_locus_tag=NLI98_04415 NZ_CP100601.1 Protein Homology CDS 892929 894191 . + 0 ID=cds-WP_088498558.1;Parent=gene-NLI98_RS04420;Dbxref=Genbank:WP_088498558.1;Name=WP_088498558.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228617.1;locus_tag=NLI98_RS04420;product=diaminopimelate decarboxylase;protein_id=WP_088498558.1;transl_table=11 NZ_CP100601.1 RefSeq gene 894184 895185 . - . ID=gene-NLI98_RS04425;Name=NLI98_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04425;old_locus_tag=NLI98_04420 NZ_CP100601.1 Protein Homology CDS 894184 895185 . - 0 ID=cds-WP_004229436.1;Parent=gene-NLI98_RS04425;Dbxref=Genbank:WP_004229436.1;Name=WP_004229436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228616.1;locus_tag=NLI98_RS04425;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_004229436.1;transl_table=11 NZ_CP100601.1 RefSeq gene 895485 896822 . + . ID=gene-NLI98_RS04430;Name=NLI98_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04430;old_locus_tag=NLI98_04425 NZ_CP100601.1 Protein Homology CDS 895485 896822 . + 0 ID=cds-WP_004174520.1;Parent=gene-NLI98_RS04430;Dbxref=Genbank:WP_004174520.1;Name=WP_004174520.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228615.1;locus_tag=NLI98_RS04430;product=PTS transporter subunit EIIC;protein_id=WP_004174520.1;transl_table=11 NZ_CP100601.1 RefSeq gene 896830 898257 . + . ID=gene-NLI98_RS04435;Name=NLI98_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04435;old_locus_tag=NLI98_04430 NZ_CP100601.1 Protein Homology CDS 896830 898257 . + 0 ID=cds-WP_029884418.1;Parent=gene-NLI98_RS04435;Dbxref=Genbank:WP_029884418.1;Name=WP_029884418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228614.1;locus_tag=NLI98_RS04435;product=glycoside hydrolase family 1 protein;protein_id=WP_029884418.1;transl_table=11 NZ_CP100601.1 RefSeq gene 898325 899098 . + . ID=gene-NLI98_RS04440;Name=NLI98_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04440;old_locus_tag=NLI98_04435 NZ_CP100601.1 Protein Homology CDS 898325 899098 . + 0 ID=cds-WP_004900355.1;Parent=gene-NLI98_RS04440;Dbxref=Genbank:WP_004900355.1;Name=WP_004900355.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228613.1;locus_tag=NLI98_RS04440;product=GntR family transcriptional regulator;protein_id=WP_004900355.1;transl_table=11 NZ_CP100601.1 RefSeq gene 899095 899574 . + . ID=gene-NLI98_RS04445;Name=NLI98_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04445;old_locus_tag=NLI98_04440 NZ_CP100601.1 Protein Homology CDS 899095 899574 . + 0 ID=cds-WP_002915983.1;Parent=gene-NLI98_RS04445;Dbxref=Genbank:WP_002915983.1;Name=WP_002915983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228612.1;locus_tag=NLI98_RS04445;product=GNAT family N-acetyltransferase;protein_id=WP_002915983.1;transl_table=11 NZ_CP100601.1 RefSeq gene 899535 900551 . - . ID=gene-NLI98_RS04450;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=NLI98_RS04450;old_locus_tag=NLI98_04445 NZ_CP100601.1 Protein Homology CDS 899535 900551 . - 0 ID=cds-WP_002915981.1;Parent=gene-NLI98_RS04450;Dbxref=Genbank:WP_002915981.1;Name=WP_002915981.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228611.1;locus_tag=NLI98_RS04450;product=HTH-type transcriptional regulator GalR;protein_id=WP_002915981.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 900645 900909 . + . ID=gene-NLI98_RS04455;Name=NLI98_RS04455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS04455;old_locus_tag=NLI98_04450;pseudo=true NZ_CP100601.1 Protein Homology CDS 900645 900909 . + 0 ID=cds-NLI98_RS04455;Parent=gene-NLI98_RS04455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228610.1;locus_tag=NLI98_RS04455;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 901173 903332 . + . ID=gene-NLI98_RS04460;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=NLI98_RS04460;old_locus_tag=NLI98_04455 NZ_CP100601.1 Protein Homology CDS 901173 903332 . + 0 ID=cds-WP_004149635.1;Parent=gene-NLI98_RS04460;Dbxref=Genbank:WP_004149635.1;Name=WP_004149635.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228609.1;locus_tag=NLI98_RS04460;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_004149635.1;transl_table=11 NZ_CP100601.1 RefSeq gene 903325 904518 . + . ID=gene-NLI98_RS04465;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=NLI98_RS04465;old_locus_tag=NLI98_04460 NZ_CP100601.1 Protein Homology CDS 903325 904518 . + 0 ID=cds-WP_002915976.1;Parent=gene-NLI98_RS04465;Dbxref=Genbank:WP_002915976.1;Name=WP_002915976.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228608.1;locus_tag=NLI98_RS04465;product=lysophospholipid transporter LplT;protein_id=WP_002915976.1;transl_table=11 NZ_CP100601.1 RefSeq gene 904622 905662 . - . ID=gene-NLI98_RS04470;Name=NLI98_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04470;old_locus_tag=NLI98_04465 NZ_CP100601.1 Protein Homology CDS 904622 905662 . - 0 ID=cds-WP_088498557.1;Parent=gene-NLI98_RS04470;Dbxref=Genbank:WP_088498557.1;Name=WP_088498557.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228607.1;locus_tag=NLI98_RS04470;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_088498557.1;transl_table=11 NZ_CP100601.1 RefSeq gene 905883 906101 . - . ID=gene-NLI98_RS04475;Name=NLI98_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04475;old_locus_tag=NLI98_04470 NZ_CP100601.1 Protein Homology CDS 905883 906101 . - 0 ID=cds-WP_002915974.1;Parent=gene-NLI98_RS04475;Dbxref=Genbank:WP_002915974.1;Name=WP_002915974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228606.1;locus_tag=NLI98_RS04475;product=YgdI/YgdR family lipoprotein;protein_id=WP_002915974.1;transl_table=11 NZ_CP100601.1 RefSeq gene 906225 906938 . - . ID=gene-NLI98_RS04480;Name=NLI98_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04480;old_locus_tag=NLI98_04475 NZ_CP100601.1 Protein Homology CDS 906225 906938 . - 0 ID=cds-WP_002915973.1;Parent=gene-NLI98_RS04480;Dbxref=Genbank:WP_002915973.1;Name=WP_002915973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228605.1;locus_tag=NLI98_RS04480;product=TerC family protein;protein_id=WP_002915973.1;transl_table=11 NZ_CP100601.1 RefSeq gene 907002 907697 . - . ID=gene-NLI98_RS04485;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=NLI98_RS04485;old_locus_tag=NLI98_04480 NZ_CP100601.1 Protein Homology CDS 907002 907697 . - 0 ID=cds-WP_004143967.1;Parent=gene-NLI98_RS04485;Dbxref=Genbank:WP_004143967.1;Name=WP_004143967.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228604.1;locus_tag=NLI98_RS04485;product=DNA mismatch repair endonuclease MutH;protein_id=WP_004143967.1;transl_table=11 NZ_CP100601.1 RefSeq gene 907783 907926 . - . ID=gene-NLI98_RS04490;Name=NLI98_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04490;old_locus_tag=NLI98_04485 NZ_CP100601.1 Protein Homology CDS 907783 907926 . - 0 ID=cds-WP_004218186.1;Parent=gene-NLI98_RS04490;Dbxref=Genbank:WP_004218186.1;Name=WP_004218186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228603.1;locus_tag=NLI98_RS04490;product=hypothetical protein;protein_id=WP_004218186.1;transl_table=11 NZ_CP100601.1 RefSeq gene 908380 908910 . + . ID=gene-NLI98_RS04495;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=NLI98_RS04495;old_locus_tag=NLI98_04490 NZ_CP100601.1 Protein Homology CDS 908380 908910 . + 0 ID=cds-WP_002915936.1;Parent=gene-NLI98_RS04495;Dbxref=Genbank:WP_002915936.1;Name=WP_002915936.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655775.1;locus_tag=NLI98_RS04495;product=RNA pyrophosphohydrolase;protein_id=WP_002915936.1;transl_table=11 NZ_CP100601.1 RefSeq gene 908923 911169 . + . ID=gene-NLI98_RS04500;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=NLI98_RS04500;old_locus_tag=NLI98_04495 NZ_CP100601.1 Protein Homology CDS 908923 911169 . + 0 ID=cds-WP_002915935.1;Parent=gene-NLI98_RS04500;Dbxref=Genbank:WP_002915935.1;Name=WP_002915935.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228601.1;locus_tag=NLI98_RS04500;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_002915935.1;transl_table=11 NZ_CP100601.1 RefSeq gene 911415 912290 . + . ID=gene-NLI98_RS04505;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=NLI98_RS04505;old_locus_tag=NLI98_04500 NZ_CP100601.1 Protein Homology CDS 911415 912290 . + 0 ID=cds-WP_002915934.1;Parent=gene-NLI98_RS04505;Dbxref=Genbank:WP_002915934.1;Name=WP_002915934.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228600.1;locus_tag=NLI98_RS04505;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_002915934.1;transl_table=11 NZ_CP100601.1 RefSeq gene 912297 913091 . + . ID=gene-NLI98_RS04510;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=NLI98_RS04510;old_locus_tag=NLI98_04505 NZ_CP100601.1 Protein Homology CDS 912297 913091 . + 0 ID=cds-WP_002915933.1;Parent=gene-NLI98_RS04510;Dbxref=Genbank:WP_002915933.1;Name=WP_002915933.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;gene=thyA;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1;locus_tag=NLI98_RS04510;product=thymidylate synthase;protein_id=WP_002915933.1;transl_table=11 NZ_CP100601.1 RefSeq gene 913278 913829 . + . ID=gene-NLI98_RS04515;Name=NLI98_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04515;old_locus_tag=NLI98_04510 NZ_CP100601.1 Protein Homology CDS 913278 913829 . + 0 ID=cds-WP_004889953.1;Parent=gene-NLI98_RS04515;Dbxref=Genbank:WP_004889953.1;Name=WP_004889953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228598.1;locus_tag=NLI98_RS04515;product=prepilin peptidase-dependent protein;protein_id=WP_004889953.1;transl_table=11 NZ_CP100601.1 RefSeq gene 913826 914383 . + . ID=gene-NLI98_RS04520;Name=NLI98_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04520;old_locus_tag=NLI98_04515 NZ_CP100601.1 Protein Homology CDS 913826 914383 . + 0 ID=cds-WP_088498556.1;Parent=gene-NLI98_RS04520;Dbxref=Genbank:WP_088498556.1;Name=WP_088498556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228597.1;locus_tag=NLI98_RS04520;product=prepilin peptidase-dependent protein;protein_id=WP_088498556.1;transl_table=11 NZ_CP100601.1 RefSeq gene 914380 914787 . + . ID=gene-NLI98_RS04525;Name=NLI98_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04525;old_locus_tag=NLI98_04520 NZ_CP100601.1 Protein Homology CDS 914380 914787 . + 0 ID=cds-WP_004181182.1;Parent=gene-NLI98_RS04525;Dbxref=Genbank:WP_004181182.1;Name=WP_004181182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228596.1;locus_tag=NLI98_RS04525;product=DUF2509 family protein;protein_id=WP_004181182.1;transl_table=11 NZ_CP100601.1 RefSeq gene 914772 915095 . + . ID=gene-NLI98_RS04530;Name=NLI98_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04530;old_locus_tag=NLI98_04525 NZ_CP100601.1 Protein Homology CDS 914772 915095 . + 0 ID=cds-WP_002915888.1;Parent=gene-NLI98_RS04530;Dbxref=Genbank:WP_002915888.1;Name=WP_002915888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228595.1;locus_tag=NLI98_RS04530;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_002915888.1;transl_table=11 NZ_CP100601.1 RefSeq gene 915108 918485 . + . ID=gene-NLI98_RS04535;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=NLI98_RS04535;old_locus_tag=NLI98_04530 NZ_CP100601.1 Protein Homology CDS 915108 918485 . + 0 ID=cds-WP_085885928.1;Parent=gene-NLI98_RS04535;Dbxref=Genbank:WP_085885928.1;Name=WP_085885928.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228594.1;locus_tag=NLI98_RS04535;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_085885928.1;transl_table=11 NZ_CP100601.1 RefSeq gene 918606 921491 . + . ID=gene-NLI98_RS04540;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=NLI98_RS04540;old_locus_tag=NLI98_04535 NZ_CP100601.1 Protein Homology CDS 918606 921491 . + 0 ID=cds-WP_088498555.1;Parent=gene-NLI98_RS04540;Dbxref=Genbank:WP_088498555.1;Name=WP_088498555.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417298.1;locus_tag=NLI98_RS04540;product=pitrilysin;protein_id=WP_088498555.1;transl_table=11 NZ_CP100601.1 RefSeq gene 921488 925024 . + . ID=gene-NLI98_RS04545;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=NLI98_RS04545;old_locus_tag=NLI98_04540 NZ_CP100601.1 Protein Homology CDS 921488 925024 . + 0 ID=cds-WP_004151968.1;Parent=gene-NLI98_RS04545;Dbxref=Genbank:WP_004151968.1;Name=WP_004151968.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151968.1;locus_tag=NLI98_RS04545;product=exodeoxyribonuclease V subunit beta;protein_id=WP_004151968.1;transl_table=11 NZ_CP100601.1 RefSeq gene 925021 926865 . + . ID=gene-NLI98_RS04550;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=NLI98_RS04550;old_locus_tag=NLI98_04545 NZ_CP100601.1 Protein Homology CDS 925021 926865 . + 0 ID=cds-WP_004149617.1;Parent=gene-NLI98_RS04550;Dbxref=Genbank:WP_004149617.1;Name=WP_004149617.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228591.1;locus_tag=NLI98_RS04550;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_004149617.1;transl_table=11 NZ_CP100601.1 RefSeq gene 926923 927243 . - . ID=gene-NLI98_RS04555;Name=NLI98_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04555;old_locus_tag=NLI98_04550 NZ_CP100601.1 Protein Homology CDS 926923 927243 . - 0 ID=cds-WP_032418382.1;Parent=gene-NLI98_RS04555;Dbxref=Genbank:WP_032418382.1;Name=WP_032418382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228590.1;locus_tag=NLI98_RS04555;product=hypothetical protein;protein_id=WP_032418382.1;transl_table=11 NZ_CP100601.1 RefSeq gene 927473 928804 . - . ID=gene-NLI98_RS04560;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=NLI98_RS04560;old_locus_tag=NLI98_04555 NZ_CP100601.1 Protein Homology CDS 927473 928804 . - 0 ID=cds-WP_004149616.1;Parent=gene-NLI98_RS04560;Dbxref=Genbank:WP_004149616.1;Name=WP_004149616.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=acetyl-CoA:L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228589.1;locus_tag=NLI98_RS04560;product=amino-acid N-acetyltransferase;protein_id=WP_004149616.1;transl_table=11 NZ_CP100601.1 RefSeq gene 929032 930285 . + . ID=gene-NLI98_RS04565;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=NLI98_RS04565;old_locus_tag=NLI98_04560 NZ_CP100601.1 Protein Homology CDS 929032 930285 . + 0 ID=cds-WP_004174538.1;Parent=gene-NLI98_RS04565;Dbxref=Genbank:WP_004174538.1;Name=WP_004174538.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiC;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228588.1;locus_tag=NLI98_RS04565;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_004174538.1;transl_table=11 NZ_CP100601.1 RefSeq gene 930303 931379 . + . ID=gene-NLI98_RS04570;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=NLI98_RS04570;old_locus_tag=NLI98_04565 NZ_CP100601.1 Protein Homology CDS 930303 931379 . + 0 ID=cds-WP_004143954.1;Parent=gene-NLI98_RS04570;Dbxref=Genbank:WP_004143954.1;Name=WP_004143954.1;Ontology_term=GO:0009236,GO:0048472,GO:0005737;gbkey=CDS;gene=cobD;go_component=cytoplasm|0005737||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228587.1;locus_tag=NLI98_RS04570;product=threonine-phosphate decarboxylase CobD;protein_id=WP_004143954.1;transl_table=11 NZ_CP100601.1 RefSeq gene 931383 932249 . - . ID=gene-NLI98_RS04575;Name=NLI98_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04575;old_locus_tag=NLI98_04570 NZ_CP100601.1 Protein Homology CDS 931383 932249 . - 0 ID=cds-WP_004193729.1;Parent=gene-NLI98_RS04575;Dbxref=Genbank:WP_004193729.1;Name=WP_004193729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015632997.1;locus_tag=NLI98_RS04575;product=L-threonine kinase;protein_id=WP_004193729.1;transl_table=11 NZ_CP100601.1 RefSeq gene 932341 933555 . - . ID=gene-NLI98_RS04580;Name=NLI98_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04580;old_locus_tag=NLI98_04575 NZ_CP100601.1 Protein Homology CDS 932341 933555 . - 0 ID=cds-WP_004185484.1;Parent=gene-NLI98_RS04580;Dbxref=Genbank:WP_004185484.1;Name=WP_004185484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228585.1;locus_tag=NLI98_RS04580;product=acetate/propionate family kinase;protein_id=WP_004185484.1;transl_table=11 NZ_CP100601.1 RefSeq gene 933552 933992 . - . ID=gene-NLI98_RS04585;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=NLI98_RS04585;old_locus_tag=NLI98_04580 NZ_CP100601.1 Protein Homology CDS 933552 933992 . - 0 ID=cds-WP_004185483.1;Parent=gene-NLI98_RS04585;Dbxref=Genbank:WP_004185483.1;Name=WP_004185483.1;gbkey=CDS;gene=pduV;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228584.1;locus_tag=NLI98_RS04585;product=propanediol utilization protein PduV;protein_id=WP_004185483.1;transl_table=11 NZ_CP100601.1 RefSeq gene 933997 934347 . - . ID=gene-NLI98_RS04590;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=NLI98_RS04590;old_locus_tag=NLI98_04585 NZ_CP100601.1 Protein Homology CDS 933997 934347 . - 0 ID=cds-WP_002915850.1;Parent=gene-NLI98_RS04590;Dbxref=Genbank:WP_002915850.1;Name=WP_002915850.1;gbkey=CDS;gene=pduU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228583.1;locus_tag=NLI98_RS04590;product=propanediol utilization microcompartment protein PduU;protein_id=WP_002915850.1;transl_table=11 NZ_CP100601.1 RefSeq gene 934347 934901 . - . ID=gene-NLI98_RS04595;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=NLI98_RS04595;old_locus_tag=NLI98_04590 NZ_CP100601.1 Protein Homology CDS 934347 934901 . - 0 ID=cds-WP_064175369.1;Parent=gene-NLI98_RS04595;Dbxref=Genbank:WP_064175369.1;Name=WP_064175369.1;gbkey=CDS;gene=pduT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228582.1;locus_tag=NLI98_RS04595;product=propanediol utilization microcompartment protein PduT;protein_id=WP_064175369.1;transl_table=11 NZ_CP100601.1 RefSeq gene 934904 936256 . - . ID=gene-NLI98_RS04600;Name=NLI98_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04600;old_locus_tag=NLI98_04595 NZ_CP100601.1 Protein Homology CDS 934904 936256 . - 0 ID=cds-WP_004149613.1;Parent=gene-NLI98_RS04600;Dbxref=Genbank:WP_004149613.1;Name=WP_004149613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228581.1;locus_tag=NLI98_RS04600;product=SLBB domain-containing protein;protein_id=WP_004149613.1;transl_table=11 NZ_CP100601.1 RefSeq gene 936253 937365 . - . ID=gene-NLI98_RS04605;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=NLI98_RS04605;old_locus_tag=NLI98_04600 NZ_CP100601.1 Protein Homology CDS 936253 937365 . - 0 ID=cds-WP_088498554.1;Parent=gene-NLI98_RS04605;Dbxref=Genbank:WP_088498554.1;Name=WP_088498554.1;gbkey=CDS;gene=pduQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228580.1;locus_tag=NLI98_RS04605;product=1-propanol dehydrogenase PduQ;protein_id=WP_088498554.1;transl_table=11 NZ_CP100601.1 RefSeq gene 937377 938765 . - . ID=gene-NLI98_RS04610;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=NLI98_RS04610;old_locus_tag=NLI98_04605 NZ_CP100601.1 Protein Homology CDS 937377 938765 . - 0 ID=cds-WP_004143947.1;Parent=gene-NLI98_RS04610;Dbxref=Genbank:WP_004143947.1;Name=WP_004143947.1;gbkey=CDS;gene=pduP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228579.1;locus_tag=NLI98_RS04610;product=CoA-acylating propionaldehyde dehydrogenase PduP;protein_id=WP_004143947.1;transl_table=11 NZ_CP100601.1 RefSeq gene 938762 939778 . - . ID=gene-NLI98_RS04615;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=NLI98_RS04615;old_locus_tag=NLI98_04610 NZ_CP100601.1 Protein Homology CDS 938762 939778 . - 0 ID=cds-WP_088498553.1;Parent=gene-NLI98_RS04615;Dbxref=Genbank:WP_088498553.1;Name=WP_088498553.1;gbkey=CDS;gene=pduO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228578.1;locus_tag=NLI98_RS04615;product=two-domain cob(I)yrinic acid a%2Cc-diamide adenosyltransferase PduO;protein_id=WP_088498553.1;transl_table=11 NZ_CP100601.1 RefSeq gene 939789 940064 . - . ID=gene-NLI98_RS04620;Name=NLI98_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04620;old_locus_tag=NLI98_04615 NZ_CP100601.1 Protein Homology CDS 939789 940064 . - 0 ID=cds-WP_002915814.1;Parent=gene-NLI98_RS04620;Dbxref=Genbank:WP_002915814.1;Name=WP_002915814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228577.1;locus_tag=NLI98_RS04620;product=ethanolamine utilization protein EutN;protein_id=WP_002915814.1;transl_table=11 NZ_CP100601.1 RefSeq gene 940068 940559 . - . ID=gene-NLI98_RS04625;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=NLI98_RS04625;old_locus_tag=NLI98_04620 NZ_CP100601.1 Protein Homology CDS 940068 940559 . - 0 ID=cds-WP_040182068.1;Parent=gene-NLI98_RS04625;Dbxref=Genbank:WP_040182068.1;Name=WP_040182068.1;gbkey=CDS;gene=pduM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228576.1;locus_tag=NLI98_RS04625;product=microcompartment protein PduM;protein_id=WP_040182068.1;transl_table=11 NZ_CP100601.1 RefSeq gene 940556 941188 . - . ID=gene-NLI98_RS04630;Name=NLI98_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04630;old_locus_tag=NLI98_04625 NZ_CP100601.1 Protein Homology CDS 940556 941188 . - 0 ID=cds-WP_002915810.1;Parent=gene-NLI98_RS04630;Dbxref=Genbank:WP_002915810.1;Name=WP_002915810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228575.1;locus_tag=NLI98_RS04630;product=phosphate propanoyltransferase;protein_id=WP_002915810.1;transl_table=11 NZ_CP100601.1 RefSeq gene 941188 941634 . - . ID=gene-NLI98_RS04635;Name=NLI98_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04635;old_locus_tag=NLI98_04630 NZ_CP100601.1 Protein Homology CDS 941188 941634 . - 0 ID=cds-WP_002915808.1;Parent=gene-NLI98_RS04635;Dbxref=Genbank:WP_002915808.1;Name=WP_002915808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228574.1;locus_tag=NLI98_RS04635;product=BMC domain-containing protein;protein_id=WP_002915808.1;transl_table=11 NZ_CP100601.1 RefSeq gene 941656 941931 . - . ID=gene-NLI98_RS04640;Name=pduJ;gbkey=Gene;gene=pduJ;gene_biotype=protein_coding;locus_tag=NLI98_RS04640;old_locus_tag=NLI98_04635 NZ_CP100601.1 Protein Homology CDS 941656 941931 . - 0 ID=cds-WP_002915806.1;Parent=gene-NLI98_RS04640;Dbxref=Genbank:WP_002915806.1;Name=WP_002915806.1;gbkey=CDS;gene=pduJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228573.1;locus_tag=NLI98_RS04640;product=propanediol utilization microcompartment protein PduJ;protein_id=WP_002915806.1;transl_table=11 NZ_CP100601.1 RefSeq gene 941950 942300 . - . ID=gene-NLI98_RS04645;Name=NLI98_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04645;old_locus_tag=NLI98_04640 NZ_CP100601.1 Protein Homology CDS 941950 942300 . - 0 ID=cds-WP_002915803.1;Parent=gene-NLI98_RS04645;Dbxref=Genbank:WP_002915803.1;Name=WP_002915803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228572.1;locus_tag=NLI98_RS04645;product=glycerol dehydratase reactivase beta/small subunit family protein;protein_id=WP_002915803.1;transl_table=11 NZ_CP100601.1 RefSeq gene 942290 944122 . - . ID=gene-NLI98_RS04650;Name=NLI98_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04650;old_locus_tag=NLI98_04645 NZ_CP100601.1 Protein Homology CDS 942290 944122 . - 0 ID=cds-WP_023286836.1;Parent=gene-NLI98_RS04650;Dbxref=Genbank:WP_023286836.1;Name=WP_023286836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228571.1;locus_tag=NLI98_RS04650;product=diol dehydratase reactivase subunit alpha;protein_id=WP_023286836.1;transl_table=11 NZ_CP100601.1 RefSeq gene 944136 944660 . - . ID=gene-NLI98_RS04655;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;locus_tag=NLI98_RS04655;old_locus_tag=NLI98_04650 NZ_CP100601.1 Protein Homology CDS 944136 944660 . - 0 ID=cds-WP_002915750.1;Parent=gene-NLI98_RS04655;Dbxref=Genbank:WP_002915750.1;Name=WP_002915750.1;gbkey=CDS;gene=pduE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228570.1;locus_tag=NLI98_RS04655;product=propanediol dehydratase small subunit PduE;protein_id=WP_002915750.1;transl_table=11 NZ_CP100601.1 RefSeq gene 944675 945364 . - . ID=gene-NLI98_RS04660;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;locus_tag=NLI98_RS04660;old_locus_tag=NLI98_04655 NZ_CP100601.1 Protein Homology CDS 944675 945364 . - 0 ID=cds-WP_002915746.1;Parent=gene-NLI98_RS04660;Dbxref=Genbank:WP_002915746.1;Name=WP_002915746.1;gbkey=CDS;gene=pduD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228569.1;locus_tag=NLI98_RS04660;product=propanediol dehydratase medium subunit PduD;protein_id=WP_002915746.1;transl_table=11 NZ_CP100601.1 RefSeq gene 945375 947039 . - . ID=gene-NLI98_RS04665;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;locus_tag=NLI98_RS04665;old_locus_tag=NLI98_04660 NZ_CP100601.1 Protein Homology CDS 945375 947039 . - 0 ID=cds-WP_002915744.1;Parent=gene-NLI98_RS04665;Dbxref=Genbank:WP_002915744.1;Name=WP_002915744.1;gbkey=CDS;gene=pduC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228568.1;locus_tag=NLI98_RS04665;product=propanediol dehydratase large subunit PduC;protein_id=WP_002915744.1;transl_table=11 NZ_CP100601.1 RefSeq gene 947058 947870 . - . ID=gene-NLI98_RS04670;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=NLI98_RS04670;old_locus_tag=NLI98_04665 NZ_CP100601.1 Protein Homology CDS 947058 947870 . - 0 ID=cds-WP_002915739.1;Parent=gene-NLI98_RS04670;Dbxref=Genbank:WP_002915739.1;Name=WP_002915739.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=pduB;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228567.1;locus_tag=NLI98_RS04670;product=propanediol utilization microcompartment protein PduB;protein_id=WP_002915739.1;transl_table=11 NZ_CP100601.1 RefSeq gene 947867 948151 . - . ID=gene-NLI98_RS04675;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=NLI98_RS04675;old_locus_tag=NLI98_04670 NZ_CP100601.1 Protein Homology CDS 947867 948151 . - 0 ID=cds-WP_002915737.1;Parent=gene-NLI98_RS04675;Dbxref=Genbank:WP_002915737.1;Name=WP_002915737.1;gbkey=CDS;gene=pduA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228566.1;locus_tag=NLI98_RS04675;product=propanediol utilization microcompartment protein PduA;protein_id=WP_002915737.1;transl_table=11 NZ_CP100601.1 RefSeq gene 948676 949485 . + . ID=gene-NLI98_RS04680;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=NLI98_RS04680;old_locus_tag=NLI98_04675 NZ_CP100601.1 Protein Homology CDS 948676 949485 . + 0 ID=cds-WP_004185469.1;Parent=gene-NLI98_RS04680;Dbxref=Genbank:WP_004185469.1;Name=WP_004185469.1;gbkey=CDS;gene=pduF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185469.1;locus_tag=NLI98_RS04680;product=propanediol diffusion facilitator PduF;protein_id=WP_004185469.1;transl_table=11 NZ_CP100601.1 RefSeq gene 949689 950600 . + . ID=gene-NLI98_RS04685;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=NLI98_RS04685;old_locus_tag=NLI98_04680 NZ_CP100601.1 Protein Homology CDS 949689 950600 . + 0 ID=cds-WP_004181164.1;Parent=gene-NLI98_RS04685;Dbxref=Genbank:WP_004181164.1;Name=WP_004181164.1;gbkey=CDS;gene=pocR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004143938.1;locus_tag=NLI98_RS04685;product=regulatory protein PocR;protein_id=WP_004181164.1;transl_table=11 NZ_CP100601.1 cmsearch riboswitch 950882 951060 . + . ID=id-NZ_CP100601.1:950882..951060;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100601.1 RefSeq gene 951153 952529 . + . ID=gene-NLI98_RS04690;Name=NLI98_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04690;old_locus_tag=NLI98_04685 NZ_CP100601.1 Protein Homology CDS 951153 952529 . + 0 ID=cds-WP_019704766.1;Parent=gene-NLI98_RS04690;Dbxref=Genbank:WP_019704766.1;Name=WP_019704766.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228564.1;locus_tag=NLI98_RS04690;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_019704766.1;transl_table=11 NZ_CP100601.1 RefSeq gene 952526 953485 . + . ID=gene-NLI98_RS04695;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=NLI98_RS04695;old_locus_tag=NLI98_04690 NZ_CP100601.1 Protein Homology CDS 952526 953485 . + 0 ID=cds-WP_088498552.1;Parent=gene-NLI98_RS04695;Dbxref=Genbank:WP_088498552.1;Name=WP_088498552.1;Ontology_term=GO:0009236,GO:0016880;gbkey=CDS;gene=cbiB;go_function=acid-ammonia (or amide) ligase activity|0016880||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228563.1;locus_tag=NLI98_RS04695;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_088498552.1;transl_table=11 NZ_CP100601.1 RefSeq gene 953496 954131 . + . ID=gene-NLI98_RS04700;Name=NLI98_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04700;old_locus_tag=NLI98_04695 NZ_CP100601.1 Protein Homology CDS 953496 954131 . + 0 ID=cds-WP_088498551.1;Parent=gene-NLI98_RS04700;Dbxref=Genbank:WP_088498551.1;Name=WP_088498551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228562.1;locus_tag=NLI98_RS04700;product=cobalt-precorrin-8 methylmutase;protein_id=WP_088498551.1;transl_table=11 NZ_CP100601.1 RefSeq gene 954128 955267 . + . ID=gene-NLI98_RS04705;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=NLI98_RS04705;old_locus_tag=NLI98_04700 NZ_CP100601.1 Protein Homology CDS 954128 955267 . + 0 ID=cds-WP_032415496.1;Parent=gene-NLI98_RS04705;Dbxref=Genbank:WP_032415496.1;Name=WP_032415496.1;Ontology_term=GO:0009236,GO:0005737;gbkey=CDS;gene=cbiD;go_component=cytoplasm|0005737||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228561.1;locus_tag=NLI98_RS04705;product=cobalt-precorrin-5B (C(1))-methyltransferase CbiD;protein_id=WP_032415496.1;transl_table=11 NZ_CP100601.1 RefSeq gene 955261 955866 . + . ID=gene-NLI98_RS04710;Name=NLI98_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04710;old_locus_tag=NLI98_04705 NZ_CP100601.1 Protein Homology CDS 955261 955866 . + 0 ID=cds-WP_004174583.1;Parent=gene-NLI98_RS04710;Dbxref=Genbank:WP_004174583.1;Name=WP_004174583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228560.1;locus_tag=NLI98_RS04710;product=cobalt-precorrin-7 (C(5))-methyltransferase;protein_id=WP_004174583.1;transl_table=11 NZ_CP100601.1 RefSeq gene 955856 956425 . + . ID=gene-NLI98_RS04715;Name=NLI98_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04715;old_locus_tag=NLI98_04710 NZ_CP100601.1 Protein Homology CDS 955856 956425 . + 0 ID=cds-WP_002915684.1;Parent=gene-NLI98_RS04715;Dbxref=Genbank:WP_002915684.1;Name=WP_002915684.1;Ontology_term=GO:0009236,GO:0008276;gbkey=CDS;go_function=protein methyltransferase activity|0008276||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228559.1;locus_tag=NLI98_RS04715;product=decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase;protein_id=WP_002915684.1;transl_table=11 NZ_CP100601.1 RefSeq gene 956418 957191 . + . ID=gene-NLI98_RS04720;Name=NLI98_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04720;old_locus_tag=NLI98_04715 NZ_CP100601.1 Protein Homology CDS 956418 957191 . + 0 ID=cds-WP_004149602.1;Parent=gene-NLI98_RS04720;Dbxref=Genbank:WP_004149602.1;Name=WP_004149602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228558.1;locus_tag=NLI98_RS04720;product=cobalt-precorrin-4 methyltransferase;protein_id=WP_004149602.1;transl_table=11 NZ_CP100601.1 RefSeq gene 957172 958227 . + . ID=gene-NLI98_RS04725;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=protein_coding;locus_tag=NLI98_RS04725;old_locus_tag=NLI98_04720 NZ_CP100601.1 Protein Homology CDS 957172 958227 . + 0 ID=cds-WP_004174586.1;Parent=gene-NLI98_RS04725;Dbxref=Genbank:WP_004174586.1;Name=WP_004174586.1;gbkey=CDS;gene=cbiG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228557.1;locus_tag=NLI98_RS04725;product=cobalt-precorrin 5A hydrolase;protein_id=WP_004174586.1;transl_table=11 NZ_CP100601.1 RefSeq gene 958227 958952 . + . ID=gene-NLI98_RS04730;Name=NLI98_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04730;old_locus_tag=NLI98_04725 NZ_CP100601.1 Protein Homology CDS 958227 958952 . + 0 ID=cds-WP_004143930.1;Parent=gene-NLI98_RS04730;Dbxref=Genbank:WP_004143930.1;Name=WP_004143930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228556.1;locus_tag=NLI98_RS04730;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_004143930.1;transl_table=11 NZ_CP100601.1 RefSeq gene 958949 959734 . + . ID=gene-NLI98_RS04735;Name=NLI98_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04735;old_locus_tag=NLI98_04730 NZ_CP100601.1 Protein Homology CDS 958949 959734 . + 0 ID=cds-WP_002915627.1;Parent=gene-NLI98_RS04735;Dbxref=Genbank:WP_002915627.1;Name=WP_002915627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228555.1;locus_tag=NLI98_RS04735;product=cobalt-precorrin-6A reductase;protein_id=WP_002915627.1;transl_table=11 NZ_CP100601.1 RefSeq gene 959745 960539 . + . ID=gene-NLI98_RS04740;Name=NLI98_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04740;old_locus_tag=NLI98_04735 NZ_CP100601.1 Protein Homology CDS 959745 960539 . + 0 ID=cds-WP_004174588.1;Parent=gene-NLI98_RS04740;Dbxref=Genbank:WP_004174588.1;Name=WP_004174588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228554.1;locus_tag=NLI98_RS04740;product=sirohydrochlorin cobaltochelatase;protein_id=WP_004174588.1;transl_table=11 NZ_CP100601.1 RefSeq gene 960536 961246 . + . ID=gene-NLI98_RS04745;Name=NLI98_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04745;old_locus_tag=NLI98_04740 NZ_CP100601.1 Protein Homology CDS 960536 961246 . + 0 ID=cds-WP_002915624.1;Parent=gene-NLI98_RS04745;Dbxref=Genbank:WP_002915624.1;Name=WP_002915624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228553.1;locus_tag=NLI98_RS04745;product=cobalt-factor II C(20)-methyltransferase;protein_id=WP_002915624.1;transl_table=11 NZ_CP100601.1 RefSeq gene 961246 961983 . + . ID=gene-NLI98_RS04750;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=NLI98_RS04750;old_locus_tag=NLI98_04745 NZ_CP100601.1 Protein Homology CDS 961246 961983 . + 0 ID=cds-WP_088498550.1;Parent=gene-NLI98_RS04750;Dbxref=Genbank:WP_088498550.1;Name=WP_088498550.1;Ontology_term=GO:0009236;gbkey=CDS;gene=cbiM;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228552.1;locus_tag=NLI98_RS04750;product=cobalt ECF transporter S component CbiM;protein_id=WP_088498550.1;transl_table=11 NZ_CP100601.1 RefSeq gene 961985 962266 . + . ID=gene-NLI98_RS04755;Name=NLI98_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04755;old_locus_tag=NLI98_04750 NZ_CP100601.1 Protein Homology CDS 961985 962266 . + 0 ID=cds-WP_002915619.1;Parent=gene-NLI98_RS04755;Dbxref=Genbank:WP_002915619.1;Name=WP_002915619.1;Ontology_term=GO:0006824,GO:0009236,GO:0015087,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA;go_process=cobalt ion transport|0006824||IEA,cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228551.1;locus_tag=NLI98_RS04755;product=energy-coupling factor ABC transporter substrate-binding protein;protein_id=WP_002915619.1;transl_table=11 NZ_CP100601.1 RefSeq gene 962253 962930 . + . ID=gene-NLI98_RS04760;Name=NLI98_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04760;old_locus_tag=NLI98_04755 NZ_CP100601.1 Protein Homology CDS 962253 962930 . + 0 ID=cds-WP_032440283.1;Parent=gene-NLI98_RS04760;Dbxref=Genbank:WP_032440283.1;Name=WP_032440283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228550.1;locus_tag=NLI98_RS04760;product=energy-coupling factor ABC transporter transmembrane protein;protein_id=WP_032440283.1;transl_table=11 NZ_CP100601.1 RefSeq gene 962939 963763 . + . ID=gene-NLI98_RS04765;Name=NLI98_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04765;old_locus_tag=NLI98_04760 NZ_CP100601.1 Protein Homology CDS 962939 963763 . + 0 ID=cds-WP_023313592.1;Parent=gene-NLI98_RS04765;Dbxref=Genbank:WP_023313592.1;Name=WP_023313592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228549.1;locus_tag=NLI98_RS04765;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_023313592.1;transl_table=11 NZ_CP100601.1 RefSeq gene 963760 965283 . + . ID=gene-NLI98_RS04770;Name=NLI98_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04770;old_locus_tag=NLI98_04765 NZ_CP100601.1 Protein Homology CDS 963760 965283 . + 0 ID=cds-WP_004174595.1;Parent=gene-NLI98_RS04770;Dbxref=Genbank:WP_004174595.1;Name=WP_004174595.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228548.1;locus_tag=NLI98_RS04770;product=cobyric acid synthase;protein_id=WP_004174595.1;transl_table=11 NZ_CP100601.1 RefSeq gene 965277 965822 . + . ID=gene-NLI98_RS04775;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=NLI98_RS04775;old_locus_tag=NLI98_04770 NZ_CP100601.1 Protein Homology CDS 965277 965822 . + 0 ID=cds-WP_002915611.1;Parent=gene-NLI98_RS04775;Dbxref=Genbank:WP_002915611.1;Name=WP_002915611.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228547.1;locus_tag=NLI98_RS04775;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_002915611.1;transl_table=11 NZ_CP100601.1 RefSeq gene 965866 966921 . + . ID=gene-NLI98_RS04780;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=NLI98_RS04780;old_locus_tag=NLI98_04775 NZ_CP100601.1 Protein Homology CDS 965866 966921 . + 0 ID=cds-WP_014907001.1;Parent=gene-NLI98_RS04780;Dbxref=Genbank:WP_014907001.1;Name=WP_014907001.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228546.1;locus_tag=NLI98_RS04780;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_014907001.1;transl_table=11 NZ_CP100601.1 RefSeq gene 967017 967093 . - . ID=gene-NLI98_RS04785;Name=NLI98_RS04785;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS04785;old_locus_tag=NLI98_04780 NZ_CP100601.1 tRNAscan-SE tRNA 967017 967093 . - . ID=rna-NLI98_RS04785;Parent=gene-NLI98_RS04785;anticodon=(pos:complement(967057..967059));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS04785;product=tRNA-Met NZ_CP100601.1 tRNAscan-SE exon 967017 967093 . - . ID=exon-NLI98_RS04785-1;Parent=rna-NLI98_RS04785;anticodon=(pos:complement(967057..967059));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS04785;product=tRNA-Met NZ_CP100601.1 RefSeq gene 967126 967202 . - . ID=gene-NLI98_RS04790;Name=NLI98_RS04790;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS04790;old_locus_tag=NLI98_04785 NZ_CP100601.1 tRNAscan-SE tRNA 967126 967202 . - . ID=rna-NLI98_RS04790;Parent=gene-NLI98_RS04790;anticodon=(pos:complement(967166..967168));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS04790;product=tRNA-Met NZ_CP100601.1 tRNAscan-SE exon 967126 967202 . - . ID=exon-NLI98_RS04790-1;Parent=rna-NLI98_RS04790;anticodon=(pos:complement(967166..967168));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS04790;product=tRNA-Met NZ_CP100601.1 RefSeq gene 967236 967312 . - . ID=gene-NLI98_RS04795;Name=NLI98_RS04795;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS04795;old_locus_tag=NLI98_04790 NZ_CP100601.1 tRNAscan-SE tRNA 967236 967312 . - . ID=rna-NLI98_RS04795;Parent=gene-NLI98_RS04795;anticodon=(pos:complement(967276..967278));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS04795;product=tRNA-Met NZ_CP100601.1 tRNAscan-SE exon 967236 967312 . - . ID=exon-NLI98_RS04795-1;Parent=rna-NLI98_RS04795;anticodon=(pos:complement(967276..967278));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS04795;product=tRNA-Met NZ_CP100601.1 RefSeq gene 967523 968620 . + . ID=gene-NLI98_RS04800;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=NLI98_RS04800;old_locus_tag=NLI98_04795 NZ_CP100601.1 Protein Homology CDS 967523 968620 . + 0 ID=cds-WP_002915579.1;Parent=gene-NLI98_RS04800;Dbxref=Genbank:WP_002915579.1;Name=WP_002915579.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785702.1;locus_tag=NLI98_RS04800;product=murein transglycosylase A;protein_id=WP_002915579.1;transl_table=11 NZ_CP100601.1 RefSeq gene 968708 969529 . + . ID=gene-NLI98_RS04805;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=NLI98_RS04805;old_locus_tag=NLI98_04800 NZ_CP100601.1 Protein Homology CDS 968708 969529 . + 0 ID=cds-WP_002915577.1;Parent=gene-NLI98_RS04805;Dbxref=Genbank:WP_002915577.1;Name=WP_002915577.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228544.1;locus_tag=NLI98_RS04805;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_002915577.1;transl_table=11 NZ_CP100601.1 RefSeq gene 969572 970003 . - . ID=gene-NLI98_RS04810;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=NLI98_RS04810;old_locus_tag=NLI98_04805 NZ_CP100601.1 Protein Homology CDS 969572 970003 . - 0 ID=cds-WP_004142894.1;Parent=gene-NLI98_RS04810;Dbxref=Genbank:WP_004142894.1;Name=WP_004142894.1;gbkey=CDS;gene=csdE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205515.1;locus_tag=NLI98_RS04810;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_004142894.1;transl_table=11 NZ_CP100601.1 RefSeq gene 970003 971208 . - . ID=gene-NLI98_RS04815;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=NLI98_RS04815;old_locus_tag=NLI98_04810 NZ_CP100601.1 Protein Homology CDS 970003 971208 . - 0 ID=cds-WP_040218895.1;Parent=gene-NLI98_RS04815;Dbxref=Genbank:WP_040218895.1;Name=WP_040218895.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228542.1;locus_tag=NLI98_RS04815;product=cysteine desulfurase CsdA;protein_id=WP_040218895.1;transl_table=11 NZ_CP100601.1 RefSeq gene 971406 971630 . + . ID=gene-NLI98_RS04820;Name=NLI98_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04820;old_locus_tag=NLI98_04815 NZ_CP100601.1 Protein Homology CDS 971406 971630 . + 0 ID=cds-WP_002915549.1;Parent=gene-NLI98_RS04820;Dbxref=Genbank:WP_002915549.1;Name=WP_002915549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417289.2;locus_tag=NLI98_RS04820;product=YgdI/YgdR family lipoprotein;protein_id=WP_002915549.1;transl_table=11 NZ_CP100601.1 RefSeq gene 971982 972899 . + . ID=gene-NLI98_RS04825;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=NLI98_RS04825;old_locus_tag=NLI98_04820 NZ_CP100601.1 Protein Homology CDS 971982 972899 . + 0 ID=cds-WP_002915545.1;Parent=gene-NLI98_RS04825;Dbxref=Genbank:WP_002915545.1;Name=WP_002915545.1;gbkey=CDS;gene=gcvA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130970.1;locus_tag=NLI98_RS04825;product=glycine cleavage system transcriptional regulator GcvA;protein_id=WP_002915545.1;transl_table=11 NZ_CP100601.1 RefSeq gene 972919 973314 . + . ID=gene-NLI98_RS04830;Name=NLI98_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04830;old_locus_tag=NLI98_04825 NZ_CP100601.1 Protein Homology CDS 972919 973314 . + 0 ID=cds-WP_002915543.1;Parent=gene-NLI98_RS04830;Dbxref=Genbank:WP_002915543.1;Name=WP_002915543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228539.1;locus_tag=NLI98_RS04830;product=DUF423 domain-containing protein;protein_id=WP_002915543.1;transl_table=11 NZ_CP100601.1 RefSeq gene 973307 974407 . + . ID=gene-NLI98_RS04835;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=NLI98_RS04835;old_locus_tag=NLI98_04830 NZ_CP100601.1 Protein Homology CDS 973307 974407 . + 0 ID=cds-WP_002915541.1;Parent=gene-NLI98_RS04835;Dbxref=Genbank:WP_002915541.1;Name=WP_002915541.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010435097.1;locus_tag=NLI98_RS04835;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_002915541.1;transl_table=11 NZ_CP100601.1 RefSeq gene 974456 975166 . - . ID=gene-NLI98_RS04840;Name=fucR;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=NLI98_RS04840;old_locus_tag=NLI98_04835 NZ_CP100601.1 Protein Homology CDS 974456 975166 . - 0 ID=cds-WP_004142883.1;Parent=gene-NLI98_RS04840;Dbxref=Genbank:WP_004142883.1;Name=WP_004142883.1;gbkey=CDS;gene=fucR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228537.1;locus_tag=NLI98_RS04840;product=L-fucose operon activator;protein_id=WP_004142883.1;transl_table=11 NZ_CP100601.1 RefSeq gene 975225 975647 . - . ID=gene-NLI98_RS04845;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=NLI98_RS04845;old_locus_tag=NLI98_04840 NZ_CP100601.1 Protein Homology CDS 975225 975647 . - 0 ID=cds-WP_002915538.1;Parent=gene-NLI98_RS04845;Dbxref=Genbank:WP_002915538.1;Name=WP_002915538.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228536.1;locus_tag=NLI98_RS04845;product=L-fucose mutarotase;protein_id=WP_002915538.1;transl_table=11 NZ_CP100601.1 RefSeq gene 975649 977067 . - . ID=gene-NLI98_RS04850;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=NLI98_RS04850;old_locus_tag=NLI98_04845 NZ_CP100601.1 Protein Homology CDS 975649 977067 . - 0 ID=cds-WP_048988854.1;Parent=gene-NLI98_RS04850;Dbxref=Genbank:WP_048988854.1;Name=WP_048988854.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228535.1;locus_tag=NLI98_RS04850;product=L-fuculokinase;protein_id=WP_048988854.1;transl_table=11 NZ_CP100601.1 RefSeq gene 977175 978950 . - . ID=gene-NLI98_RS04855;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=NLI98_RS04855;old_locus_tag=NLI98_04850 NZ_CP100601.1 Protein Homology CDS 977175 978950 . - 0 ID=cds-WP_264452127.1;Parent=gene-NLI98_RS04855;Dbxref=Genbank:WP_264452127.1;Name=WP_264452127.1;Ontology_term=GO:0006005,GO:0008736;gbkey=CDS;gene=fucI;go_function=L-fucose isomerase activity|0008736||IEA;go_process=L-fucose biosynthetic process|0006005||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228534.1;locus_tag=NLI98_RS04855;product=L-fucose isomerase;protein_id=WP_264452127.1;transl_table=11 NZ_CP100601.1 RefSeq gene 978983 980293 . - . ID=gene-NLI98_RS04860;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=NLI98_RS04860;old_locus_tag=NLI98_04855 NZ_CP100601.1 Protein Homology CDS 978983 980293 . - 0 ID=cds-WP_004151076.1;Parent=gene-NLI98_RS04860;Dbxref=Genbank:WP_004151076.1;Name=WP_004151076.1;Ontology_term=GO:0015756,GO:0015150;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228533.1;locus_tag=NLI98_RS04860;product=L-fucose:H+ symporter permease;protein_id=WP_004151076.1;transl_table=11 NZ_CP100601.1 RefSeq gene 980860 981507 . + . ID=gene-NLI98_RS04865;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=NLI98_RS04865;old_locus_tag=NLI98_04860 NZ_CP100601.1 Protein Homology CDS 980860 981507 . + 0 ID=cds-WP_002915470.1;Parent=gene-NLI98_RS04865;Dbxref=Genbank:WP_002915470.1;Name=WP_002915470.1;Ontology_term=GO:0042355;gbkey=CDS;gene=fucA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228531.1;locus_tag=NLI98_RS04865;product=L-fuculose-phosphate aldolase;protein_id=WP_002915470.1;transl_table=11 NZ_CP100601.1 RefSeq gene 981535 982683 . + . ID=gene-NLI98_RS04870;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=NLI98_RS04870;old_locus_tag=NLI98_04865 NZ_CP100601.1 Protein Homology CDS 981535 982683 . + 0 ID=cds-WP_040250272.1;Parent=gene-NLI98_RS04870;Dbxref=Genbank:WP_040250272.1;Name=WP_040250272.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228530.1;locus_tag=NLI98_RS04870;product=lactaldehyde reductase;protein_id=WP_040250272.1;transl_table=11 NZ_CP100601.1 RefSeq gene 982754 983509 . - . ID=gene-NLI98_RS04875;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=NLI98_RS04875;old_locus_tag=NLI98_04870 NZ_CP100601.1 Protein Homology CDS 982754 983509 . - 0 ID=cds-WP_088498549.1;Parent=gene-NLI98_RS04875;Dbxref=Genbank:WP_088498549.1;Name=WP_088498549.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228529.1;locus_tag=NLI98_RS04875;product=flap endonuclease Xni;protein_id=WP_088498549.1;transl_table=11 NZ_CP100601.1 RefSeq gene 983606 985549 . - . ID=gene-NLI98_RS04880;Name=NLI98_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04880;old_locus_tag=NLI98_04875 NZ_CP100601.1 Protein Homology CDS 983606 985549 . - 0 ID=cds-WP_004142865.1;Parent=gene-NLI98_RS04880;Dbxref=Genbank:WP_004142865.1;Name=WP_004142865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228528.1;locus_tag=NLI98_RS04880;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_004142865.1;transl_table=11 NZ_CP100601.1 RefSeq gene 985627 985743 . + . ID=gene-NLI98_RS04885;Name=NLI98_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04885;old_locus_tag=NLI98_04880 NZ_CP100601.1 Protein Homology CDS 985627 985743 . + 0 ID=cds-WP_004219275.1;Parent=gene-NLI98_RS04885;Dbxref=Genbank:WP_004219275.1;Name=WP_004219275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228527.1;locus_tag=NLI98_RS04885;product=hypothetical protein;protein_id=WP_004219275.1;transl_table=11 NZ_CP100601.1 RefSeq gene 985821 986993 . + . ID=gene-NLI98_RS04890;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=NLI98_RS04890;old_locus_tag=NLI98_04885 NZ_CP100601.1 Protein Homology CDS 985821 986993 . + 0 ID=cds-WP_002915347.1;Parent=gene-NLI98_RS04890;Dbxref=Genbank:WP_002915347.1;Name=WP_002915347.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228526.1;locus_tag=NLI98_RS04890;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_002915347.1;transl_table=11 NZ_CP100601.1 RefSeq gene 987040 988437 . + . ID=gene-NLI98_RS04895;Name=NLI98_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04895;old_locus_tag=NLI98_04890 NZ_CP100601.1 Protein Homology CDS 987040 988437 . + 0 ID=cds-WP_032421774.1;Parent=gene-NLI98_RS04895;Dbxref=Genbank:WP_032421774.1;Name=WP_032421774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228525.1;locus_tag=NLI98_RS04895;product=FAD/NAD(P)-binding protein;protein_id=WP_032421774.1;transl_table=11 NZ_CP100601.1 RefSeq gene 988511 989917 . + . ID=gene-NLI98_RS04900;Name=NLI98_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04900;old_locus_tag=NLI98_04895 NZ_CP100601.1 Protein Homology CDS 988511 989917 . + 0 ID=cds-WP_002915313.1;Parent=gene-NLI98_RS04900;Dbxref=Genbank:WP_002915313.1;Name=WP_002915313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228524.1;locus_tag=NLI98_RS04900;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_002915313.1;transl_table=11 NZ_CP100601.1 RefSeq gene 989914 990936 . + . ID=gene-NLI98_RS04905;Name=NLI98_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04905;old_locus_tag=NLI98_04900 NZ_CP100601.1 Protein Homology CDS 989914 990936 . + 0 ID=cds-WP_004174621.1;Parent=gene-NLI98_RS04905;Dbxref=Genbank:WP_004174621.1;Name=WP_004174621.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228523.1;locus_tag=NLI98_RS04905;product=ATP-binding cassette domain-containing protein;protein_id=WP_004174621.1;transl_table=11 NZ_CP100601.1 RefSeq gene 990933 991631 . + . ID=gene-NLI98_RS04910;Name=NLI98_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04910;old_locus_tag=NLI98_04905 NZ_CP100601.1 Protein Homology CDS 990933 991631 . + 0 ID=cds-WP_002915267.1;Parent=gene-NLI98_RS04910;Dbxref=Genbank:WP_002915267.1;Name=WP_002915267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228522.1;locus_tag=NLI98_RS04910;product=ABC transporter permease;protein_id=WP_002915267.1;transl_table=11 NZ_CP100601.1 RefSeq gene 991628 992506 . + . ID=gene-NLI98_RS04915;Name=NLI98_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04915;old_locus_tag=NLI98_04910 NZ_CP100601.1 Protein Homology CDS 991628 992506 . + 0 ID=cds-WP_002915265.1;Parent=gene-NLI98_RS04915;Dbxref=Genbank:WP_002915265.1;Name=WP_002915265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228521.1;locus_tag=NLI98_RS04915;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_002915265.1;transl_table=11 NZ_CP100601.1 RefSeq gene 992700 994121 . + . ID=gene-NLI98_RS04920;Name=NLI98_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04920;old_locus_tag=NLI98_04915 NZ_CP100601.1 Protein Homology CDS 992700 994121 . + 0 ID=cds-WP_088498548.1;Parent=gene-NLI98_RS04920;Dbxref=Genbank:WP_088498548.1;Name=WP_088498548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228520.1;locus_tag=NLI98_RS04920;product=MFS transporter;protein_id=WP_088498548.1;transl_table=11 NZ_CP100601.1 RefSeq gene 994132 995355 . + . ID=gene-NLI98_RS04925;Name=NLI98_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04925;old_locus_tag=NLI98_04920 NZ_CP100601.1 Protein Homology CDS 994132 995355 . + 0 ID=cds-WP_002915263.1;Parent=gene-NLI98_RS04925;Dbxref=Genbank:WP_002915263.1;Name=WP_002915263.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228519.1;locus_tag=NLI98_RS04925;product=acyl-CoA dehydrogenase family protein;protein_id=WP_002915263.1;transl_table=11 NZ_CP100601.1 RefSeq gene 995401 996342 . - . ID=gene-NLI98_RS04930;Name=NLI98_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04930;old_locus_tag=NLI98_04925 NZ_CP100601.1 Protein Homology CDS 995401 996342 . - 0 ID=cds-WP_002915261.1;Parent=gene-NLI98_RS04930;Dbxref=Genbank:WP_002915261.1;Name=WP_002915261.1;Ontology_term=GO:0042626,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228518.1;locus_tag=NLI98_RS04930;product=aliphatic sulfonate ABC transporter substrate-binding protein;protein_id=WP_002915261.1;transl_table=11 NZ_CP100601.1 RefSeq gene 996481 997848 . - . ID=gene-NLI98_RS04935;Name=NLI98_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04935;old_locus_tag=NLI98_04930 NZ_CP100601.1 Protein Homology CDS 996481 997848 . - 0 ID=cds-WP_002915259.1;Parent=gene-NLI98_RS04935;Dbxref=Genbank:WP_002915259.1;Name=WP_002915259.1;Ontology_term=GO:0009063,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228517.1;locus_tag=NLI98_RS04935;product=L-serine ammonia-lyase;protein_id=WP_002915259.1;transl_table=11 NZ_CP100601.1 RefSeq gene 997914 999203 . - . ID=gene-NLI98_RS04940;Name=NLI98_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04940;old_locus_tag=NLI98_04935 NZ_CP100601.1 Protein Homology CDS 997914 999203 . - 0 ID=cds-WP_004151070.1;Parent=gene-NLI98_RS04940;Dbxref=Genbank:WP_004151070.1;Name=WP_004151070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228516.1;locus_tag=NLI98_RS04940;product=HAAAP family serine/threonine permease;protein_id=WP_004151070.1;transl_table=11 NZ_CP100601.1 RefSeq gene 999713 1001080 . - . ID=gene-NLI98_RS04945;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=NLI98_RS04945;old_locus_tag=NLI98_04940 NZ_CP100601.1 Protein Homology CDS 999713 1001080 . - 0 ID=cds-WP_002915258.1;Parent=gene-NLI98_RS04945;Dbxref=Genbank:WP_002915258.1;Name=WP_002915258.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228515.1;locus_tag=NLI98_RS04945;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_002915258.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1001192 1002037 . - . ID=gene-NLI98_RS04950;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=NLI98_RS04950;old_locus_tag=NLI98_04945 NZ_CP100601.1 Protein Homology CDS 1001192 1002037 . - 0 ID=cds-WP_004174633.1;Parent=gene-NLI98_RS04950;Dbxref=Genbank:WP_004174633.1;Name=WP_004174633.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228514.1;locus_tag=NLI98_RS04950;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_004174633.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1002106 1002651 . + . ID=gene-NLI98_RS04955;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=NLI98_RS04955;old_locus_tag=NLI98_04950 NZ_CP100601.1 Protein Homology CDS 1002106 1002651 . + 0 ID=cds-WP_032434995.1;Parent=gene-NLI98_RS04955;Dbxref=Genbank:WP_032434995.1;Name=WP_032434995.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228513.1;locus_tag=NLI98_RS04955;product=SecY-interacting protein;protein_id=WP_032434995.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1003283 1003612 . + . ID=gene-NLI98_RS04960;Name=NLI98_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04960;old_locus_tag=NLI98_04955 NZ_CP100601.1 Protein Homology CDS 1003283 1003612 . + 0 ID=cds-WP_064278580.1;Parent=gene-NLI98_RS04960;Dbxref=Genbank:WP_064278580.1;Name=WP_064278580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228512.1;locus_tag=NLI98_RS04960;product=YqcC family protein;protein_id=WP_064278580.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1003612 1004406 . + . ID=gene-NLI98_RS04965;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=NLI98_RS04965;old_locus_tag=NLI98_04960 NZ_CP100601.1 Protein Homology CDS 1003612 1004406 . + 0 ID=cds-WP_002915236.1;Parent=gene-NLI98_RS04965;Dbxref=Genbank:WP_002915236.1;Name=WP_002915236.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228511.1;locus_tag=NLI98_RS04965;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_002915236.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1004411 1004854 . + . ID=gene-NLI98_RS04970;Name=NLI98_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04970;old_locus_tag=NLI98_04965 NZ_CP100601.1 Protein Homology CDS 1004411 1004854 . + 0 ID=cds-WP_002915235.1;Parent=gene-NLI98_RS04970;Dbxref=Genbank:WP_002915235.1;Name=WP_002915235.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228510.1;locus_tag=NLI98_RS04970;product=flavodoxin;protein_id=WP_002915235.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1005326 1006678 . + . ID=gene-NLI98_RS04975;Name=NLI98_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04975;old_locus_tag=NLI98_04970 NZ_CP100601.1 Protein Homology CDS 1005326 1006678 . + 0 ID=cds-WP_002915225.1;Parent=gene-NLI98_RS04975;Dbxref=Genbank:WP_002915225.1;Name=WP_002915225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228509.1;locus_tag=NLI98_RS04975;product=MFS transporter;protein_id=WP_002915225.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1006681 1008021 . + . ID=gene-NLI98_RS04980;Name=NLI98_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04980;old_locus_tag=NLI98_04975 NZ_CP100601.1 Protein Homology CDS 1006681 1008021 . + 0 ID=cds-WP_004185436.1;Parent=gene-NLI98_RS04980;Dbxref=Genbank:WP_004185436.1;Name=WP_004185436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228508.1;locus_tag=NLI98_RS04980;product=glucarate dehydratase family protein;protein_id=WP_004185436.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1008039 1009379 . + . ID=gene-NLI98_RS04985;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=NLI98_RS04985;old_locus_tag=NLI98_04980 NZ_CP100601.1 Protein Homology CDS 1008039 1009379 . + 0 ID=cds-WP_088498546.1;Parent=gene-NLI98_RS04985;Dbxref=Genbank:WP_088498546.1;Name=WP_088498546.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228507.1;locus_tag=NLI98_RS04985;product=glucarate dehydratase;protein_id=WP_088498546.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1009452 1010591 . + . ID=gene-NLI98_RS04990;Name=NLI98_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS04990;old_locus_tag=NLI98_04985 NZ_CP100601.1 Protein Homology CDS 1009452 1010591 . + 0 ID=cds-WP_002915222.1;Parent=gene-NLI98_RS04990;Dbxref=Genbank:WP_002915222.1;Name=WP_002915222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228506.1;locus_tag=NLI98_RS04990;product=glycerate kinase;protein_id=WP_002915222.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1010749 1013499 . - . ID=gene-NLI98_RS04995;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=NLI98_RS04995;old_locus_tag=NLI98_04990 NZ_CP100601.1 Protein Homology CDS 1010749 1013499 . - 0 ID=cds-WP_004151066.1;Parent=gene-NLI98_RS04995;Dbxref=Genbank:WP_004151066.1;Name=WP_004151066.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=barA;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228505.1;locus_tag=NLI98_RS04995;product=two-component sensor histidine kinase BarA;protein_id=WP_004151066.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1013613 1014917 . + . ID=gene-NLI98_RS05000;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=NLI98_RS05000;old_locus_tag=NLI98_04995 NZ_CP100601.1 Protein Homology CDS 1013613 1014917 . + 0 ID=cds-WP_088498545.1;Parent=gene-NLI98_RS05000;Dbxref=Genbank:WP_088498545.1;Name=WP_088498545.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228504.1;locus_tag=NLI98_RS05000;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_088498545.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1015039 1017276 . + . ID=gene-NLI98_RS05005;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=NLI98_RS05005;old_locus_tag=NLI98_05000 NZ_CP100601.1 Protein Homology CDS 1015039 1017276 . + 0 ID=cds-WP_002915217.1;Parent=gene-NLI98_RS05005;Dbxref=Genbank:WP_002915217.1;Name=WP_002915217.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228503.1;locus_tag=NLI98_RS05005;product=GTP diphosphokinase;protein_id=WP_002915217.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1017388 1018179 . + . ID=gene-NLI98_RS05010;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=NLI98_RS05010;old_locus_tag=NLI98_05005 NZ_CP100601.1 Protein Homology CDS 1017388 1018179 . + 0 ID=cds-WP_002915215.1;Parent=gene-NLI98_RS05010;Dbxref=Genbank:WP_002915215.1;Name=WP_002915215.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228502.1;locus_tag=NLI98_RS05010;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_002915215.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1018460 1020097 . + . ID=gene-NLI98_RS05015;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=NLI98_RS05015;old_locus_tag=NLI98_05010 NZ_CP100601.1 Protein Homology CDS 1018460 1020097 . + 0 ID=cds-WP_004142808.1;Parent=gene-NLI98_RS05015;Dbxref=Genbank:WP_004142808.1;Name=WP_004142808.1;Ontology_term=GO:0009220,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130912.1;locus_tag=NLI98_RS05015;product=CTP synthase (glutamine hydrolyzing);protein_id=WP_004142808.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1020179 1021477 . + . ID=gene-NLI98_RS05020;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=NLI98_RS05020;old_locus_tag=NLI98_05015 NZ_CP100601.1 Protein Homology CDS 1020179 1021477 . + 0 ID=cds-WP_002915213.1;Parent=gene-NLI98_RS05020;Dbxref=Genbank:WP_002915213.1;Name=WP_002915213.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456663.1;locus_tag=NLI98_RS05020;product=phosphopyruvate hydratase;protein_id=WP_002915213.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1021541 1022650 . - . ID=gene-NLI98_RS05025;Name=NLI98_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05025;old_locus_tag=NLI98_05020 NZ_CP100601.1 Protein Homology CDS 1021541 1022650 . - 0 ID=cds-WP_023158724.1;Parent=gene-NLI98_RS05025;Dbxref=Genbank:WP_023158724.1;Name=WP_023158724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228499.1;locus_tag=NLI98_RS05025;product=SDR family oxidoreductase;protein_id=WP_023158724.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1023125 1023796 . + . ID=gene-NLI98_RS05030;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=NLI98_RS05030;old_locus_tag=NLI98_05025 NZ_CP100601.1 Protein Homology CDS 1023125 1023796 . + 0 ID=cds-WP_002915210.1;Parent=gene-NLI98_RS05030;Dbxref=Genbank:WP_002915210.1;Name=WP_002915210.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001199960.1;locus_tag=NLI98_RS05030;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_002915210.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1023837 1024202 . - . ID=gene-NLI98_RS05035;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=NLI98_RS05035;old_locus_tag=NLI98_05030 NZ_CP100601.1 Protein Homology CDS 1023837 1024202 . - 0 ID=cds-WP_004174641.1;Parent=gene-NLI98_RS05035;Dbxref=Genbank:WP_004174641.1;Name=WP_004174641.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228496.1;locus_tag=NLI98_RS05035;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_004174641.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1024519 1026318 . + . ID=gene-NLI98_RS05040;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=NLI98_RS05040;old_locus_tag=NLI98_05035 NZ_CP100601.1 Protein Homology CDS 1024519 1026318 . + 0 ID=cds-WP_004151065.1;Parent=gene-NLI98_RS05040;Dbxref=Genbank:WP_004151065.1;Name=WP_004151065.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417244.1;locus_tag=NLI98_RS05040;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_004151065.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1026318 1028030 . + . ID=gene-NLI98_RS05045;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=NLI98_RS05045;old_locus_tag=NLI98_05040 NZ_CP100601.1 Protein Homology CDS 1026318 1028030 . + 0 ID=cds-WP_004142787.1;Parent=gene-NLI98_RS05045;Dbxref=Genbank:WP_004142787.1;Name=WP_004142787.1;Ontology_term=GO:0000103,GO:0004783;gbkey=CDS;gene=cysI;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001290736.1;locus_tag=NLI98_RS05045;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_004142787.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1028129 1028863 . + . ID=gene-NLI98_RS05050;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=NLI98_RS05050;old_locus_tag=NLI98_05045 NZ_CP100601.1 Protein Homology CDS 1028129 1028863 . + 0 ID=cds-WP_002915177.1;Parent=gene-NLI98_RS05050;Dbxref=Genbank:WP_002915177.1;Name=WP_002915177.1;Ontology_term=GO:0019379,GO:0004604;gbkey=CDS;gene=cysH;go_function=phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228492.1;locus_tag=NLI98_RS05050;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_002915177.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1028936 1029982 . - . ID=gene-NLI98_RS05055;Name=NLI98_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05055;old_locus_tag=NLI98_05050 NZ_CP100601.1 Protein Homology CDS 1028936 1029982 . - 0 ID=cds-WP_004174643.1;Parent=gene-NLI98_RS05055;Dbxref=Genbank:WP_004174643.1;Name=WP_004174643.1;Ontology_term=GO:0008235;gbkey=CDS;go_function=metalloexopeptidase activity|0008235||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228491.1;locus_tag=NLI98_RS05055;product=aminopeptidase;protein_id=WP_004174643.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1030229 1031635 . + . ID=gene-NLI98_RS05060;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=NLI98_RS05060;old_locus_tag=NLI98_05055 NZ_CP100601.1 Protein Homology CDS 1030229 1031635 . + 0 ID=cds-WP_004217556.1;Parent=gene-NLI98_RS05060;Dbxref=Genbank:WP_004217556.1;Name=WP_004217556.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228490.1;locus_tag=NLI98_RS05060;product=siroheme synthase CysG;protein_id=WP_004217556.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1031645 1032553 . + . ID=gene-NLI98_RS05065;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=NLI98_RS05065;old_locus_tag=NLI98_05060 NZ_CP100601.1 Protein Homology CDS 1031645 1032553 . + 0 ID=cds-WP_002915160.1;Parent=gene-NLI98_RS05065;Dbxref=Genbank:WP_002915160.1;Name=WP_002915160.1;Ontology_term=GO:0019419,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate reduction|0019419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130891.1;locus_tag=NLI98_RS05065;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_002915160.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1032563 1033990 . + . ID=gene-NLI98_RS05070;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=NLI98_RS05070;old_locus_tag=NLI98_05065 NZ_CP100601.1 Protein Homology CDS 1032563 1033990 . + 0 ID=cds-WP_002915159.1;Parent=gene-NLI98_RS05070;Dbxref=Genbank:WP_002915159.1;Name=WP_002915159.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228488.1;locus_tag=NLI98_RS05070;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_002915159.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1033990 1034595 . + . ID=gene-NLI98_RS05075;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=NLI98_RS05075;old_locus_tag=NLI98_05070 NZ_CP100601.1 Protein Homology CDS 1033990 1034595 . + 0 ID=cds-WP_002915158.1;Parent=gene-NLI98_RS05075;Dbxref=Genbank:WP_002915158.1;Name=WP_002915158.1;Ontology_term=GO:0006790,GO:0004020;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228487.1;locus_tag=NLI98_RS05075;product=adenylyl-sulfate kinase;protein_id=WP_002915158.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1034646 1034972 . + . ID=gene-NLI98_RS05080;Name=NLI98_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05080;old_locus_tag=NLI98_05075 NZ_CP100601.1 Protein Homology CDS 1034646 1034972 . + 0 ID=cds-WP_002915157.1;Parent=gene-NLI98_RS05080;Dbxref=Genbank:WP_002915157.1;Name=WP_002915157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228486.1;locus_tag=NLI98_RS05080;product=DUF3561 family protein;protein_id=WP_002915157.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1035113 1035430 . + . ID=gene-NLI98_RS05085;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=NLI98_RS05085;old_locus_tag=NLI98_05080 NZ_CP100601.1 Protein Homology CDS 1035113 1035430 . + 0 ID=cds-WP_002915156.1;Parent=gene-NLI98_RS05085;Dbxref=Genbank:WP_002915156.1;Name=WP_002915156.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228485.1;locus_tag=NLI98_RS05085;product=cell division protein FtsB;protein_id=WP_002915156.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1035450 1036160 . + . ID=gene-NLI98_RS05090;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=NLI98_RS05090;old_locus_tag=NLI98_05085 NZ_CP100601.1 Protein Homology CDS 1035450 1036160 . + 0 ID=cds-WP_009485534.1;Parent=gene-NLI98_RS05090;Dbxref=Genbank:WP_009485534.1;Name=WP_009485534.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228484.1;locus_tag=NLI98_RS05090;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_009485534.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1036160 1036639 . + . ID=gene-NLI98_RS05095;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=NLI98_RS05095;old_locus_tag=NLI98_05090 NZ_CP100601.1 Protein Homology CDS 1036160 1036639 . + 0 ID=cds-WP_004181093.1;Parent=gene-NLI98_RS05095;Dbxref=Genbank:WP_004181093.1;Name=WP_004181093.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228483.1;locus_tag=NLI98_RS05095;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_004181093.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1036636 1037685 . + . ID=gene-NLI98_RS05100;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=NLI98_RS05100;old_locus_tag=NLI98_05095 NZ_CP100601.1 Protein Homology CDS 1036636 1037685 . + 0 ID=cds-WP_004185423.1;Parent=gene-NLI98_RS05100;Dbxref=Genbank:WP_004185423.1;Name=WP_004185423.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228482.1;locus_tag=NLI98_RS05100;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_004185423.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1037666 1038427 . + . ID=gene-NLI98_RS05105;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=NLI98_RS05105;old_locus_tag=NLI98_05100 NZ_CP100601.1 Protein Homology CDS 1037666 1038427 . + 0 ID=cds-WP_088498544.1;Parent=gene-NLI98_RS05105;Dbxref=Genbank:WP_088498544.1;Name=WP_088498544.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228481.1;locus_tag=NLI98_RS05105;product=5'/3'-nucleotidase SurE;protein_id=WP_088498544.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1038421 1039047 . + . ID=gene-NLI98_RS05110;Name=NLI98_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05110;old_locus_tag=NLI98_05105 NZ_CP100601.1 Protein Homology CDS 1038421 1039047 . + 0 ID=cds-WP_002915108.1;Parent=gene-NLI98_RS05110;Dbxref=Genbank:WP_002915108.1;Name=WP_002915108.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130872.1;locus_tag=NLI98_RS05110;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_002915108.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1039172 1040308 . + . ID=gene-NLI98_RS05115;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=NLI98_RS05115;old_locus_tag=NLI98_05110 NZ_CP100601.1 Protein Homology CDS 1039172 1040308 . + 0 ID=cds-WP_004149542.1;Parent=gene-NLI98_RS05115;Dbxref=Genbank:WP_004149542.1;Name=WP_004149542.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228479.1;locus_tag=NLI98_RS05115;product=murein hydrolase activator NlpD;protein_id=WP_004149542.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1040466 1041458 . + . ID=gene-NLI98_RS05120;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=NLI98_RS05120;old_locus_tag=NLI98_05115 NZ_CP100601.1 Protein Homology CDS 1040466 1041458 . + 0 ID=cds-WP_002915106.1;Parent=gene-NLI98_RS05120;Dbxref=Genbank:WP_002915106.1;Name=WP_002915106.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081498.1;locus_tag=NLI98_RS05120;product=RNA polymerase sigma factor RpoS;protein_id=WP_002915106.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1041511 1041888 . - . ID=gene-NLI98_RS05125;Name=NLI98_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05125;old_locus_tag=NLI98_05120 NZ_CP100601.1 Protein Homology CDS 1041511 1041888 . - 0 ID=cds-WP_088498543.1;Parent=gene-NLI98_RS05125;Dbxref=Genbank:WP_088498543.1;Name=WP_088498543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228477.1;locus_tag=NLI98_RS05125;product=DUF4440 domain-containing protein;protein_id=WP_088498543.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1041885 1043087 . - . ID=gene-NLI98_RS05130;Name=NLI98_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05130;old_locus_tag=NLI98_05125 NZ_CP100601.1 Protein Homology CDS 1041885 1043087 . - 0 ID=cds-WP_088498542.1;Parent=gene-NLI98_RS05130;Dbxref=Genbank:WP_088498542.1;Name=WP_088498542.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228476.1;locus_tag=NLI98_RS05130;product=MFS transporter;protein_id=WP_088498542.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1043196 1044083 . + . ID=gene-NLI98_RS05135;Name=NLI98_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05135;old_locus_tag=NLI98_05130 NZ_CP100601.1 Protein Homology CDS 1043196 1044083 . + 0 ID=cds-WP_004181081.1;Parent=gene-NLI98_RS05135;Dbxref=Genbank:WP_004181081.1;Name=WP_004181081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228475.1;locus_tag=NLI98_RS05135;product=LysR family transcriptional regulator;protein_id=WP_004181081.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1044092 1044499 . - . ID=gene-NLI98_RS05140;Name=NLI98_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05140;old_locus_tag=NLI98_05135 NZ_CP100601.1 Protein Homology CDS 1044092 1044499 . - 0 ID=cds-WP_002915102.1;Parent=gene-NLI98_RS05140;Dbxref=Genbank:WP_002915102.1;Name=WP_002915102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806213.1;locus_tag=NLI98_RS05140;product=MarR family transcriptional regulator;protein_id=WP_002915102.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1044673 1045266 . + . ID=gene-NLI98_RS05145;Name=NLI98_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05145;old_locus_tag=NLI98_05140 NZ_CP100601.1 Protein Homology CDS 1044673 1045266 . + 0 ID=cds-WP_002915099.1;Parent=gene-NLI98_RS05145;Dbxref=Genbank:WP_002915099.1;Name=WP_002915099.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228473.1;locus_tag=NLI98_RS05145;product=non-oxidative hydroxyarylic acid decarboxylases subunit B;protein_id=WP_002915099.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1045266 1046693 . + . ID=gene-NLI98_RS05150;Name=NLI98_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05150;old_locus_tag=NLI98_05145 NZ_CP100601.1 Protein Homology CDS 1045266 1046693 . + 0 ID=cds-WP_004151060.1;Parent=gene-NLI98_RS05150;Dbxref=Genbank:WP_004151060.1;Name=WP_004151060.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228472.1;locus_tag=NLI98_RS05150;product=non-oxidative hydroxyarylic acid decarboxylases subunit C;protein_id=WP_004151060.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1046704 1046940 . + . ID=gene-NLI98_RS05155;Name=NLI98_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05155;old_locus_tag=NLI98_05150 NZ_CP100601.1 Protein Homology CDS 1046704 1046940 . + 0 ID=cds-WP_002915098.1;Parent=gene-NLI98_RS05155;Dbxref=Genbank:WP_002915098.1;Name=WP_002915098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228471.1;locus_tag=NLI98_RS05155;product=non-oxidative hydroxyarylic acid decarboxylases subunit D;protein_id=WP_002915098.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1047279 1047431 . + . ID=gene-NLI98_RS05160;Name=NLI98_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05160;old_locus_tag=NLI98_05155 NZ_CP100601.1 Protein Homology CDS 1047279 1047431 . + 0 ID=cds-WP_002915097.1;Parent=gene-NLI98_RS05160;Dbxref=Genbank:WP_002915097.1;Name=WP_002915097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228470.1;locus_tag=NLI98_RS05160;product=type I toxin-antitoxin system Hok family toxin;protein_id=WP_002915097.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1047551 1050118 . - . ID=gene-NLI98_RS05165;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=NLI98_RS05165;old_locus_tag=NLI98_05160 NZ_CP100601.1 Protein Homology CDS 1047551 1050118 . - 0 ID=cds-WP_077255019.1;Parent=gene-NLI98_RS05165;Dbxref=Genbank:WP_077255019.1;Name=WP_077255019.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461830.1;locus_tag=NLI98_RS05165;product=DNA mismatch repair protein MutS;protein_id=WP_077255019.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1050278 1050673 . + . ID=gene-NLI98_RS05170;Name=NLI98_RS05170;end_range=1050673,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS05170;old_locus_tag=NLI98_05165;partial=true;pseudo=true NZ_CP100601.1 Protein Homology CDS 1050278 1050673 . + 0 ID=cds-NLI98_RS05170;Parent=gene-NLI98_RS05170;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1050673,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461829.1;locus_tag=NLI98_RS05170;partial=true;product=integrase arm-type DNA-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 1051750 1052343 . + . ID=gene-NLI98_RS05175;Name=NLI98_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05175;old_locus_tag=NLI98_05170 NZ_CP100601.1 Protein Homology CDS 1051750 1052343 . + 0 ID=cds-WP_088498541.1;Parent=gene-NLI98_RS05175;Dbxref=Genbank:WP_088498541.1;Name=WP_088498541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001513944.1;locus_tag=NLI98_RS05175;product=hypothetical protein;protein_id=WP_088498541.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1052488 1054317 . - . ID=gene-NLI98_RS05180;Name=NLI98_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05180;old_locus_tag=NLI98_05175 NZ_CP100601.1 Protein Homology CDS 1052488 1054317 . - 0 ID=cds-WP_088498540.1;Parent=gene-NLI98_RS05180;Dbxref=Genbank:WP_088498540.1;Name=WP_088498540.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017539.2;locus_tag=NLI98_RS05180;product=NACHT domain-containing protein;protein_id=WP_088498540.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1054680 1054823 . + . ID=gene-NLI98_RS05185;Name=NLI98_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05185;old_locus_tag=NLI98_05180 NZ_CP100601.1 GeneMarkS-2+ CDS 1054680 1054823 . + 0 ID=cds-WP_159110633.1;Parent=gene-NLI98_RS05185;Dbxref=Genbank:WP_159110633.1;Name=WP_159110633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS05185;product=hypothetical protein;protein_id=WP_159110633.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1055144 1055362 . - . ID=gene-NLI98_RS05190;Name=NLI98_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05190;old_locus_tag=NLI98_05185 NZ_CP100601.1 GeneMarkS-2+ CDS 1055144 1055362 . - 0 ID=cds-WP_088498539.1;Parent=gene-NLI98_RS05190;Dbxref=Genbank:WP_088498539.1;Name=WP_088498539.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS05190;product=hypothetical protein;protein_id=WP_088498539.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1055562 1056116 . - . ID=gene-NLI98_RS05195;Name=NLI98_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05195;old_locus_tag=NLI98_05190 NZ_CP100601.1 Protein Homology CDS 1055562 1056116 . - 0 ID=cds-WP_264452131.1;Parent=gene-NLI98_RS05195;Dbxref=Genbank:WP_264452131.1;Name=WP_264452131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000724430.1;locus_tag=NLI98_RS05195;product=hypothetical protein;protein_id=WP_264452131.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1056519 1056785 . - . ID=gene-NLI98_RS05200;Name=NLI98_RS05200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS05200;old_locus_tag=NLI98_05195;partial=true;pseudo=true;start_range=.,1056519 NZ_CP100601.1 Protein Homology CDS 1056519 1056785 . - 0 ID=cds-NLI98_RS05200;Parent=gene-NLI98_RS05200;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399289.1;locus_tag=NLI98_RS05200;partial=true;product=relaxase;pseudo=true;start_range=.,1056519;transl_table=11 NZ_CP100601.1 RefSeq gene 1056791 1057108 . - . ID=gene-NLI98_RS05205;Name=NLI98_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05205;old_locus_tag=NLI98_05200 NZ_CP100601.1 Protein Homology CDS 1056791 1057108 . - 0 ID=cds-WP_088498538.1;Parent=gene-NLI98_RS05205;Dbxref=Genbank:WP_088498538.1;Name=WP_088498538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000361735.1;locus_tag=NLI98_RS05205;product=hypothetical protein;protein_id=WP_088498538.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1057738 1059933 . + . ID=gene-NLI98_RS05210;Name=NLI98_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05210;old_locus_tag=NLI98_05205 NZ_CP100601.1 Protein Homology CDS 1057738 1059933 . + 0 ID=cds-WP_102024162.1;Parent=gene-NLI98_RS05210;Dbxref=Genbank:WP_102024162.1;Name=WP_102024162.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024565.2;locus_tag=NLI98_RS05210;product=AAA family ATPase;protein_id=WP_102024162.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1060746 1061078 . - . ID=gene-NLI98_RS05215;Name=NLI98_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05215;old_locus_tag=NLI98_05210 NZ_CP100601.1 Protein Homology CDS 1060746 1061078 . - 0 ID=cds-WP_022615624.1;Parent=gene-NLI98_RS05215;Dbxref=Genbank:WP_022615624.1;Name=WP_022615624.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019023.2;locus_tag=NLI98_RS05215;product=DUF1493 family protein;protein_id=WP_022615624.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1061078 1061212 . - . ID=gene-NLI98_RS05220;Name=NLI98_RS05220;end_range=1061212,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS05220;old_locus_tag=NLI98_05215;partial=true;pseudo=true NZ_CP100601.1 Protein Homology CDS 1061078 1061212 . - 0 ID=cds-NLI98_RS05220;Parent=gene-NLI98_RS05220;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1061212,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461822.1;locus_tag=NLI98_RS05220;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1061212 1061280 . - . ID=gene-NLI98_RS05225;Name=NLI98_RS05225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS05225;old_locus_tag=NLI98_05220;partial=true;pseudo=true;start_range=.,1061212 NZ_CP100601.1 Protein Homology CDS 1061212 1061280 . - 0 ID=cds-NLI98_RS05225;Parent=gene-NLI98_RS05225;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228467.1;locus_tag=NLI98_RS05225;partial=true;product=type VI secretion system tube protein Hcp;pseudo=true;start_range=.,1061212;transl_table=11 NZ_CP100601.1 RefSeq gene 1061559 1062338 . - . ID=gene-NLI98_RS05230;Name=NLI98_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05230;old_locus_tag=NLI98_05225 NZ_CP100601.1 Protein Homology CDS 1061559 1062338 . - 0 ID=cds-WP_048288778.1;Parent=gene-NLI98_RS05230;Dbxref=Genbank:WP_048288778.1;Name=WP_048288778.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228466.1;locus_tag=NLI98_RS05230;product=heme ABC transporter ATP-binding protein;protein_id=WP_048288778.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1062331 1063326 . - . ID=gene-NLI98_RS05235;Name=NLI98_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05235;old_locus_tag=NLI98_05230 NZ_CP100601.1 Protein Homology CDS 1062331 1063326 . - 0 ID=cds-WP_088498536.1;Parent=gene-NLI98_RS05235;Dbxref=Genbank:WP_088498536.1;Name=WP_088498536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228465.1;locus_tag=NLI98_RS05235;product=iron ABC transporter permease;protein_id=WP_088498536.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1063326 1064144 . - . ID=gene-NLI98_RS05240;Name=NLI98_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05240;old_locus_tag=NLI98_05235 NZ_CP100601.1 Protein Homology CDS 1063326 1064144 . - 0 ID=cds-WP_004181072.1;Parent=gene-NLI98_RS05240;Dbxref=Genbank:WP_004181072.1;Name=WP_004181072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228464.1;locus_tag=NLI98_RS05240;product=hemin ABC transporter substrate-binding protein;protein_id=WP_004181072.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1064141 1065172 . - . ID=gene-NLI98_RS05245;Name=NLI98_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05245;old_locus_tag=NLI98_05240 NZ_CP100601.1 Protein Homology CDS 1064141 1065172 . - 0 ID=cds-WP_023328379.1;Parent=gene-NLI98_RS05245;Dbxref=Genbank:WP_023328379.1;Name=WP_023328379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228463.1;locus_tag=NLI98_RS05245;product=hemin-degrading factor;protein_id=WP_023328379.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1065243 1067606 . - . ID=gene-NLI98_RS05250;Name=NLI98_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05250;old_locus_tag=NLI98_05245 NZ_CP100601.1 Protein Homology CDS 1065243 1067606 . - 0 ID=cds-WP_088498535.1;Parent=gene-NLI98_RS05250;Dbxref=Genbank:WP_088498535.1;Name=WP_088498535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228462.1;locus_tag=NLI98_RS05250;product=TonB-dependent receptor;protein_id=WP_088498535.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1067822 1068115 . + . ID=gene-NLI98_RS05255;Name=NLI98_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05255;old_locus_tag=NLI98_05250 NZ_CP100601.1 Protein Homology CDS 1067822 1068115 . + 0 ID=cds-WP_002915045.1;Parent=gene-NLI98_RS05255;Dbxref=Genbank:WP_002915045.1;Name=WP_002915045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228461.1;locus_tag=NLI98_RS05255;product=SelT/SelW/SelH family protein;protein_id=WP_002915045.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1068155 1069864 . - . ID=gene-NLI98_RS05260;Name=NLI98_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05260;old_locus_tag=NLI98_05255 NZ_CP100601.1 Protein Homology CDS 1068155 1069864 . - 0 ID=cds-WP_064143400.1;Parent=gene-NLI98_RS05260;Dbxref=Genbank:WP_064143400.1;Name=WP_064143400.1;Ontology_term=GO:0030976;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228460.1;locus_tag=NLI98_RS05260;product=thiamine pyrophosphate-requiring protein;protein_id=WP_064143400.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1069900 1070841 . - . ID=gene-NLI98_RS05265;Name=NLI98_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05265;old_locus_tag=NLI98_05260 NZ_CP100601.1 Protein Homology CDS 1069900 1070841 . - 0 ID=cds-WP_002915041.1;Parent=gene-NLI98_RS05265;Dbxref=Genbank:WP_002915041.1;Name=WP_002915041.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228459.1;locus_tag=NLI98_RS05265;product=AEC family transporter;protein_id=WP_002915041.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1071026 1071913 . + . ID=gene-NLI98_RS05270;Name=NLI98_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05270;old_locus_tag=NLI98_05265 NZ_CP100601.1 Protein Homology CDS 1071026 1071913 . + 0 ID=cds-WP_004181063.1;Parent=gene-NLI98_RS05270;Dbxref=Genbank:WP_004181063.1;Name=WP_004181063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228458.1;locus_tag=NLI98_RS05270;product=LysR family transcriptional regulator;protein_id=WP_004181063.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1071981 1072322 . + . ID=gene-NLI98_RS05275;Name=NLI98_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05275;old_locus_tag=NLI98_05270 NZ_CP100601.1 Protein Homology CDS 1071981 1072322 . + 0 ID=cds-WP_002915037.1;Parent=gene-NLI98_RS05275;Dbxref=Genbank:WP_002915037.1;Name=WP_002915037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228457.1;locus_tag=NLI98_RS05275;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_002915037.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1072389 1073243 . - . ID=gene-NLI98_RS05280;Name=NLI98_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05280;old_locus_tag=NLI98_05275 NZ_CP100601.1 Protein Homology CDS 1072389 1073243 . - 0 ID=cds-WP_004181059.1;Parent=gene-NLI98_RS05280;Dbxref=Genbank:WP_004181059.1;Name=WP_004181059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228456.1;locus_tag=NLI98_RS05280;product=metal ABC transporter permease;protein_id=WP_004181059.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1073237 1074085 . - . ID=gene-NLI98_RS05285;Name=sitC;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=NLI98_RS05285;old_locus_tag=NLI98_05280 NZ_CP100601.1 Protein Homology CDS 1073237 1074085 . - 0 ID=cds-WP_038435646.1;Parent=gene-NLI98_RS05285;Dbxref=Genbank:WP_038435646.1;Name=WP_038435646.1;gbkey=CDS;gene=sitC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228455.1;locus_tag=NLI98_RS05285;product=iron/manganese ABC transporter permease subunit SitC;protein_id=WP_038435646.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1074082 1074903 . - . ID=gene-NLI98_RS05290;Name=NLI98_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05290;old_locus_tag=NLI98_05285 NZ_CP100601.1 Protein Homology CDS 1074082 1074903 . - 0 ID=cds-WP_065519473.1;Parent=gene-NLI98_RS05290;Dbxref=Genbank:WP_065519473.1;Name=WP_065519473.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228454.1;locus_tag=NLI98_RS05290;product=manganese/iron ABC transporter ATP-binding protein;protein_id=WP_065519473.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1074900 1075817 . - . ID=gene-NLI98_RS05295;Name=NLI98_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05295;old_locus_tag=NLI98_05290 NZ_CP100601.1 Protein Homology CDS 1074900 1075817 . - 0 ID=cds-WP_004174672.1;Parent=gene-NLI98_RS05295;Dbxref=Genbank:WP_004174672.1;Name=WP_004174672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228453.1;locus_tag=NLI98_RS05295;product=metal ABC transporter substrate-binding protein;protein_id=WP_004174672.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1075996 1076958 . - . ID=gene-NLI98_RS05300;Name=NLI98_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05300;old_locus_tag=NLI98_05295 NZ_CP100601.1 Protein Homology CDS 1075996 1076958 . - 0 ID=cds-WP_002915031.1;Parent=gene-NLI98_RS05300;Dbxref=Genbank:WP_002915031.1;Name=WP_002915031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002915031.1;locus_tag=NLI98_RS05300;product=LacI family transcriptional regulator;protein_id=WP_002915031.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1077015 1077929 . - . ID=gene-NLI98_RS05305;Name=NLI98_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05305;old_locus_tag=NLI98_05300 NZ_CP100601.1 Protein Homology CDS 1077015 1077929 . - 0 ID=cds-WP_004149504.1;Parent=gene-NLI98_RS05305;Dbxref=Genbank:WP_004149504.1;Name=WP_004149504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228451.1;locus_tag=NLI98_RS05305;product=ROK family protein;protein_id=WP_004149504.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1077980 1078294 . - . ID=gene-NLI98_RS05310;Name=NLI98_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05310;old_locus_tag=NLI98_05305 NZ_CP100601.1 Protein Homology CDS 1077980 1078294 . - 0 ID=cds-WP_002914983.1;Parent=gene-NLI98_RS05310;Dbxref=Genbank:WP_002914983.1;Name=WP_002914983.1;Ontology_term=GO:0009401;gbkey=CDS;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228450.1;locus_tag=NLI98_RS05310;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_002914983.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1078318 1079640 . - . ID=gene-NLI98_RS05315;Name=NLI98_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05315;old_locus_tag=NLI98_05310 NZ_CP100601.1 Protein Homology CDS 1078318 1079640 . - 0 ID=cds-WP_004145789.1;Parent=gene-NLI98_RS05315;Dbxref=Genbank:WP_004145789.1;Name=WP_004145789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228449.1;locus_tag=NLI98_RS05315;product=PTS cellobiose transporter subunit IIC;protein_id=WP_004145789.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1079650 1079964 . - . ID=gene-NLI98_RS05320;Name=NLI98_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05320;old_locus_tag=NLI98_05315 NZ_CP100601.1 Protein Homology CDS 1079650 1079964 . - 0 ID=cds-WP_002914979.1;Parent=gene-NLI98_RS05320;Dbxref=Genbank:WP_002914979.1;Name=WP_002914979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228448.1;locus_tag=NLI98_RS05320;product=PTS sugar transporter subunit IIB;protein_id=WP_002914979.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1080142 1081413 . + . ID=gene-NLI98_RS05325;Name=NLI98_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05325;old_locus_tag=NLI98_05320 NZ_CP100601.1 Protein Homology CDS 1080142 1081413 . + 0 ID=cds-WP_024622941.1;Parent=gene-NLI98_RS05325;Dbxref=Genbank:WP_024622941.1;Name=WP_024622941.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004900117.1;locus_tag=NLI98_RS05325;product=PTS transporter subunit EIIC;protein_id=WP_024622941.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1081676 1083013 . + . ID=gene-NLI98_RS05330;Name=NLI98_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05330;old_locus_tag=NLI98_05325 NZ_CP100601.1 Protein Homology CDS 1081676 1083013 . + 0 ID=cds-WP_088498534.1;Parent=gene-NLI98_RS05330;Dbxref=Genbank:WP_088498534.1;Name=WP_088498534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228445.1;locus_tag=NLI98_RS05330;product=carbohydrate porin;protein_id=WP_088498534.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1083026 1085218 . + . ID=gene-NLI98_RS05335;Name=NLI98_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05335;old_locus_tag=NLI98_05330 NZ_CP100601.1 Protein Homology CDS 1083026 1085218 . + 0 ID=cds-WP_088498533.1;Parent=gene-NLI98_RS05335;Dbxref=Genbank:WP_088498533.1;Name=WP_088498533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228444.1;locus_tag=NLI98_RS05335;product=beta-1%2C4 mannanase;protein_id=WP_088498533.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1085269 1086669 . + . ID=gene-NLI98_RS05340;Name=NLI98_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05340;old_locus_tag=NLI98_05335 NZ_CP100601.1 Protein Homology CDS 1085269 1086669 . + 0 ID=cds-WP_019704804.1;Parent=gene-NLI98_RS05340;Dbxref=Genbank:WP_019704804.1;Name=WP_019704804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228443.1;locus_tag=NLI98_RS05340;product=glycoside hydrolase family 1 protein;protein_id=WP_019704804.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1086723 1088795 . - . ID=gene-NLI98_RS05345;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=NLI98_RS05345;old_locus_tag=NLI98_05340 NZ_CP100601.1 Protein Homology CDS 1086723 1088795 . - 0 ID=cds-WP_004185384.1;Parent=gene-NLI98_RS05345;Dbxref=Genbank:WP_004185384.1;Name=WP_004185384.1;Ontology_term=GO:0006355,GO:0005515,GO:0005524,GO:0008134,GO:0043565;gbkey=CDS;gene=flhA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151050.1;locus_tag=NLI98_RS05345;product=formate hydrogenlyase transcriptional activator FlhA;protein_id=WP_004185384.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1089032 1090042 . - . ID=gene-NLI98_RS05350;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=NLI98_RS05350;old_locus_tag=NLI98_05345 NZ_CP100601.1 Protein Homology CDS 1089032 1090042 . - 0 ID=cds-WP_004174678.1;Parent=gene-NLI98_RS05350;Dbxref=Genbank:WP_004174678.1;Name=WP_004174678.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228441.1;locus_tag=NLI98_RS05350;product=hydrogenase expression/formation protein HypE;protein_id=WP_004174678.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1090039 1091160 . - . ID=gene-NLI98_RS05355;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=NLI98_RS05355;old_locus_tag=NLI98_05350 NZ_CP100601.1 Protein Homology CDS 1090039 1091160 . - 0 ID=cds-WP_004151048.1;Parent=gene-NLI98_RS05355;Dbxref=Genbank:WP_004151048.1;Name=WP_004151048.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228440.1;locus_tag=NLI98_RS05355;product=hydrogenase formation protein HypD;protein_id=WP_004151048.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1091160 1091432 . - . ID=gene-NLI98_RS05360;Name=NLI98_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05360;old_locus_tag=NLI98_05355 NZ_CP100601.1 Protein Homology CDS 1091160 1091432 . - 0 ID=cds-WP_002914934.1;Parent=gene-NLI98_RS05360;Dbxref=Genbank:WP_002914934.1;Name=WP_002914934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228439.1;locus_tag=NLI98_RS05360;product=HypC/HybG/HupF family hydrogenase formation chaperone;protein_id=WP_002914934.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1091423 1092295 . - . ID=gene-NLI98_RS05365;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=NLI98_RS05365;old_locus_tag=NLI98_05360 NZ_CP100601.1 Protein Homology CDS 1091423 1092295 . - 0 ID=cds-WP_004181043.1;Parent=gene-NLI98_RS05365;Dbxref=Genbank:WP_004181043.1;Name=WP_004181043.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311610.1;locus_tag=NLI98_RS05365;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_004181043.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1092299 1092643 . - . ID=gene-NLI98_RS05370;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=NLI98_RS05370;old_locus_tag=NLI98_05365 NZ_CP100601.1 Protein Homology CDS 1092299 1092643 . - 0 ID=cds-WP_002914928.1;Parent=gene-NLI98_RS05370;Dbxref=Genbank:WP_002914928.1;Name=WP_002914928.1;Ontology_term=GO:0036211,GO:0008901;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228436.1;locus_tag=NLI98_RS05370;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_002914928.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1092853 1093302 . + . ID=gene-NLI98_RS05375;Name=hycA;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=NLI98_RS05375;old_locus_tag=NLI98_05370 NZ_CP100601.1 Protein Homology CDS 1092853 1093302 . + 0 ID=cds-WP_002914925.1;Parent=gene-NLI98_RS05375;Dbxref=Genbank:WP_002914925.1;Name=WP_002914925.1;gbkey=CDS;gene=hycA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228435.1;locus_tag=NLI98_RS05375;product=formate hydrogenlyase regulator HycA;protein_id=WP_002914925.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1093385 1093993 . + . ID=gene-NLI98_RS05380;Name=NLI98_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05380;old_locus_tag=NLI98_05375 NZ_CP100601.1 Protein Homology CDS 1093385 1093993 . + 0 ID=cds-WP_004151047.1;Parent=gene-NLI98_RS05380;Dbxref=Genbank:WP_004151047.1;Name=WP_004151047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228434.1;locus_tag=NLI98_RS05380;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_004151047.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1093990 1095816 . + . ID=gene-NLI98_RS05385;Name=hycC;gbkey=Gene;gene=hycC;gene_biotype=protein_coding;locus_tag=NLI98_RS05385;old_locus_tag=NLI98_05380 NZ_CP100601.1 Protein Homology CDS 1093990 1095816 . + 0 ID=cds-WP_048988814.1;Parent=gene-NLI98_RS05385;Dbxref=Genbank:WP_048988814.1;Name=WP_048988814.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hycC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228433.1;locus_tag=NLI98_RS05385;product=formate hydrogenlyase subunit 3;protein_id=WP_048988814.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1095819 1096742 . + . ID=gene-NLI98_RS05390;Name=NLI98_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05390;old_locus_tag=NLI98_05385 NZ_CP100601.1 Protein Homology CDS 1095819 1096742 . + 0 ID=cds-WP_004149485.1;Parent=gene-NLI98_RS05390;Dbxref=Genbank:WP_004149485.1;Name=WP_004149485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228432.1;locus_tag=NLI98_RS05390;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_004149485.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1096759 1098468 . + . ID=gene-NLI98_RS05395;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=NLI98_RS05395;old_locus_tag=NLI98_05390 NZ_CP100601.1 Protein Homology CDS 1096759 1098468 . + 0 ID=cds-WP_004151044.1;Parent=gene-NLI98_RS05395;Dbxref=Genbank:WP_004151044.1;Name=WP_004151044.1;gbkey=CDS;gene=hycE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130590.1;locus_tag=NLI98_RS05395;product=formate hydrogenlyase subunit HycE;protein_id=WP_004151044.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1098478 1099020 . + . ID=gene-NLI98_RS05400;Name=NLI98_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05400;old_locus_tag=NLI98_05395 NZ_CP100601.1 Protein Homology CDS 1098478 1099020 . + 0 ID=cds-WP_088498532.1;Parent=gene-NLI98_RS05400;Dbxref=Genbank:WP_088498532.1;Name=WP_088498532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228430.1;locus_tag=NLI98_RS05400;product=formate hydrogenlyase complex iron-sulfur subunit;protein_id=WP_088498532.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1099020 1099787 . + . ID=gene-NLI98_RS05405;Name=NLI98_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05405;old_locus_tag=NLI98_05400 NZ_CP100601.1 Protein Homology CDS 1099020 1099787 . + 0 ID=cds-WP_002914891.1;Parent=gene-NLI98_RS05405;Dbxref=Genbank:WP_002914891.1;Name=WP_002914891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228429.1;locus_tag=NLI98_RS05405;product=NADH-quinone oxidoreductase subunit B family protein;protein_id=WP_002914891.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1099784 1100194 . + . ID=gene-NLI98_RS05410;Name=NLI98_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05410;old_locus_tag=NLI98_05405 NZ_CP100601.1 Protein Homology CDS 1099784 1100194 . + 0 ID=cds-WP_002914887.1;Parent=gene-NLI98_RS05410;Dbxref=Genbank:WP_002914887.1;Name=WP_002914887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228428.1;locus_tag=NLI98_RS05410;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_002914887.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1100187 1100657 . + . ID=gene-NLI98_RS05415;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=NLI98_RS05415;old_locus_tag=NLI98_05410 NZ_CP100601.1 Protein Homology CDS 1100187 1100657 . + 0 ID=cds-WP_004174683.1;Parent=gene-NLI98_RS05415;Dbxref=Genbank:WP_004174683.1;Name=WP_004174683.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228427.1;locus_tag=NLI98_RS05415;product=hydrogenase maturation peptidase HycI;protein_id=WP_004174683.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1100654 1100962 . - . ID=gene-NLI98_RS05420;Name=NLI98_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05420;old_locus_tag=NLI98_05415 NZ_CP100601.1 Protein Homology CDS 1100654 1100962 . - 0 ID=cds-WP_002914883.1;Parent=gene-NLI98_RS05420;Dbxref=Genbank:WP_002914883.1;Name=WP_002914883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228426.1;locus_tag=NLI98_RS05420;product=type I toxin-antitoxin system SymE family toxin;protein_id=WP_002914883.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1101144 1102568 . - . ID=gene-NLI98_RS05425;Name=NLI98_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05425;old_locus_tag=NLI98_05420 NZ_CP100601.1 Protein Homology CDS 1101144 1102568 . - 0 ID=cds-WP_004181034.1;Parent=gene-NLI98_RS05425;Dbxref=Genbank:WP_004181034.1;Name=WP_004181034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228425.1;locus_tag=NLI98_RS05425;product=6-phospho-beta-glucosidase;protein_id=WP_004181034.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1102595 1104037 . - . ID=gene-NLI98_RS05430;Name=ascF;gbkey=Gene;gene=ascF;gene_biotype=protein_coding;locus_tag=NLI98_RS05430;old_locus_tag=NLI98_05425 NZ_CP100601.1 Protein Homology CDS 1102595 1104037 . - 0 ID=cds-WP_002914879.1;Parent=gene-NLI98_RS05430;Dbxref=Genbank:WP_002914879.1;Name=WP_002914879.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=ascF;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228424.1;locus_tag=NLI98_RS05430;product=PTS cellobiose/arbutin/salicin transporter subunit IIBC;protein_id=WP_002914879.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1104305 1105318 . + . ID=gene-NLI98_RS05435;Name=NLI98_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05435;old_locus_tag=NLI98_05430 NZ_CP100601.1 Protein Homology CDS 1104305 1105318 . + 0 ID=cds-WP_004174685.1;Parent=gene-NLI98_RS05435;Dbxref=Genbank:WP_004174685.1;Name=WP_004174685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228422.1;locus_tag=NLI98_RS05435;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_004174685.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1105455 1105982 . + . ID=gene-NLI98_RS05440;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=NLI98_RS05440;old_locus_tag=NLI98_05435 NZ_CP100601.1 Protein Homology CDS 1105455 1105982 . + 0 ID=cds-WP_002914875.1;Parent=gene-NLI98_RS05440;Dbxref=Genbank:WP_002914875.1;Name=WP_002914875.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228421.1;locus_tag=NLI98_RS05440;product=electron transport protein HydN;protein_id=WP_002914875.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1105991 1108225 . + . ID=gene-NLI98_RS05445;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=NLI98_RS05445;old_locus_tag=NLI98_05440 NZ_CP100601.1 Protein Homology CDS 1105991 1108225 . + 0 ID=cds-WP_088498531.1;Parent=gene-NLI98_RS05445;Dbxref=Genbank:WP_088498531.1;Name=WP_088498531.1;Ontology_term=GO:0036211,GO:0003998;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228420.1;locus_tag=NLI98_RS05445;product=carbamoyltransferase HypF;protein_id=WP_088498531.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1108222 1109235 . + . ID=gene-NLI98_RS05450;Name=NLI98_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05450;old_locus_tag=NLI98_05445 NZ_CP100601.1 Protein Homology CDS 1108222 1109235 . + 0 ID=cds-WP_004181028.1;Parent=gene-NLI98_RS05450;Dbxref=Genbank:WP_004181028.1;Name=WP_004181028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228419.1;locus_tag=NLI98_RS05450;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_004181028.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1109332 1110465 . - . ID=gene-NLI98_RS05455;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=NLI98_RS05455;old_locus_tag=NLI98_05450 NZ_CP100601.1 Protein Homology CDS 1109332 1110465 . - 0 ID=cds-WP_004211583.1;Parent=gene-NLI98_RS05455;Dbxref=Genbank:WP_004211583.1;Name=WP_004211583.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228418.1;locus_tag=NLI98_RS05455;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_004211583.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1110462 1111910 . - . ID=gene-NLI98_RS05460;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=NLI98_RS05460;old_locus_tag=NLI98_05455 NZ_CP100601.1 Protein Homology CDS 1110462 1111910 . - 0 ID=cds-WP_004145759.1;Parent=gene-NLI98_RS05460;Dbxref=Genbank:WP_004145759.1;Name=WP_004145759.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228417.1;locus_tag=NLI98_RS05460;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_004145759.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1112098 1113648 . + . ID=gene-NLI98_RS05465;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=NLI98_RS05465;old_locus_tag=NLI98_05460 NZ_CP100601.1 Protein Homology CDS 1112098 1113648 . + 0 ID=cds-WP_087830154.1;Parent=gene-NLI98_RS05465;Dbxref=Genbank:WP_087830154.1;Name=WP_087830154.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228415.1;locus_tag=NLI98_RS05465;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_087830154.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1113611 1114576 . - . ID=gene-NLI98_RS05470;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=NLI98_RS05470;old_locus_tag=NLI98_05465 NZ_CP100601.1 Protein Homology CDS 1113611 1114576 . - 0 ID=cds-WP_004174691.1;Parent=gene-NLI98_RS05470;Dbxref=Genbank:WP_004174691.1;Name=WP_004174691.1;gbkey=CDS;gene=gutQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228414.1;locus_tag=NLI98_RS05470;product=arabinose-5-phosphate isomerase GutQ;protein_id=WP_004174691.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1114569 1115342 . - . ID=gene-NLI98_RS05475;Name=NLI98_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05475;old_locus_tag=NLI98_05470 NZ_CP100601.1 Protein Homology CDS 1114569 1115342 . - 0 ID=cds-WP_002914817.1;Parent=gene-NLI98_RS05475;Dbxref=Genbank:WP_002914817.1;Name=WP_002914817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228413.1;locus_tag=NLI98_RS05475;product=DNA-binding transcriptional repressor;protein_id=WP_002914817.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1115409 1115768 . - . ID=gene-NLI98_RS05480;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=NLI98_RS05480;old_locus_tag=NLI98_05475 NZ_CP100601.1 Protein Homology CDS 1115409 1115768 . - 0 ID=cds-WP_004145754.1;Parent=gene-NLI98_RS05480;Dbxref=Genbank:WP_004145754.1;Name=WP_004145754.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228412.1;locus_tag=NLI98_RS05480;product=transcriptional regulator GutM;protein_id=WP_004145754.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1115926 1116705 . - . ID=gene-NLI98_RS05485;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=NLI98_RS05485;old_locus_tag=NLI98_05480 NZ_CP100601.1 Protein Homology CDS 1115926 1116705 . - 0 ID=cds-WP_088498530.1;Parent=gene-NLI98_RS05485;Dbxref=Genbank:WP_088498530.1;Name=WP_088498530.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228411.1;locus_tag=NLI98_RS05485;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_088498530.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1116718 1117080 . - . ID=gene-NLI98_RS05490;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=NLI98_RS05490;old_locus_tag=NLI98_05485 NZ_CP100601.1 Protein Homology CDS 1116718 1117080 . - 0 ID=cds-WP_004174693.1;Parent=gene-NLI98_RS05490;Dbxref=Genbank:WP_004174693.1;Name=WP_004174693.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228410.1;locus_tag=NLI98_RS05490;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_004174693.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1117094 1118074 . - . ID=gene-NLI98_RS05495;Name=NLI98_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05495;old_locus_tag=NLI98_05490 NZ_CP100601.1 Protein Homology CDS 1117094 1118074 . - 0 ID=cds-WP_004149462.1;Parent=gene-NLI98_RS05495;Dbxref=Genbank:WP_004149462.1;Name=WP_004149462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228409.1;locus_tag=NLI98_RS05495;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_004149462.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1118071 1118634 . - . ID=gene-NLI98_RS05500;Name=NLI98_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05500;old_locus_tag=NLI98_05495 NZ_CP100601.1 Protein Homology CDS 1118071 1118634 . - 0 ID=cds-WP_002914812.1;Parent=gene-NLI98_RS05500;Dbxref=Genbank:WP_002914812.1;Name=WP_002914812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228408.1;locus_tag=NLI98_RS05500;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_002914812.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1118911 1119990 . + . ID=gene-NLI98_RS05505;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=NLI98_RS05505;old_locus_tag=NLI98_05500 NZ_CP100601.1 Protein Homology CDS 1118911 1119990 . + 0 ID=cds-WP_004174694.1;Parent=gene-NLI98_RS05505;Dbxref=Genbank:WP_004174694.1;Name=WP_004174694.1;gbkey=CDS;gene=mltB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228407.1;locus_tag=NLI98_RS05505;product=lytic murein transglycosylase B;protein_id=WP_004174694.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1120329 1121039 . + . ID=gene-NLI98_RS05510;Name=NLI98_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05510;old_locus_tag=NLI98_05505 NZ_CP100601.1 Protein Homology CDS 1120329 1121039 . + 0 ID=cds-WP_015958867.1;Parent=gene-NLI98_RS05510;Dbxref=Genbank:WP_015958867.1;Name=WP_015958867.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228406.1;locus_tag=NLI98_RS05510;product=ATP-binding cassette domain-containing protein;protein_id=WP_015958867.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1121036 1121899 . + . ID=gene-NLI98_RS05515;Name=NLI98_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05515;old_locus_tag=NLI98_05510 NZ_CP100601.1 Protein Homology CDS 1121036 1121899 . + 0 ID=cds-WP_004149458.1;Parent=gene-NLI98_RS05515;Dbxref=Genbank:WP_004149458.1;Name=WP_004149458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228405.1;locus_tag=NLI98_RS05515;product=metal ABC transporter permease;protein_id=WP_004149458.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1121907 1122785 . + . ID=gene-NLI98_RS05520;Name=NLI98_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05520;old_locus_tag=NLI98_05515 NZ_CP100601.1 Protein Homology CDS 1121907 1122785 . + 0 ID=cds-WP_016531227.1;Parent=gene-NLI98_RS05520;Dbxref=Genbank:WP_016531227.1;Name=WP_016531227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228404.1;locus_tag=NLI98_RS05520;product=metal ABC transporter substrate-binding protein;protein_id=WP_016531227.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1122925 1123422 . + . ID=gene-NLI98_RS05525;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=NLI98_RS05525;old_locus_tag=NLI98_05520 NZ_CP100601.1 Protein Homology CDS 1122925 1123422 . + 0 ID=cds-WP_002914771.1;Parent=gene-NLI98_RS05525;Dbxref=Genbank:WP_002914771.1;Name=WP_002914771.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228403.1;locus_tag=NLI98_RS05525;product=nicotinamide-nucleotide amidase;protein_id=WP_002914771.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1123513 1124571 . + . ID=gene-NLI98_RS05530;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=NLI98_RS05530;old_locus_tag=NLI98_05525 NZ_CP100601.1 Protein Homology CDS 1123513 1124571 . + 0 ID=cds-WP_002914769.1;Parent=gene-NLI98_RS05530;Dbxref=Genbank:WP_002914769.1;Name=WP_002914769.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228402.1;locus_tag=NLI98_RS05530;product=recombinase RecA;protein_id=WP_002914769.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1124639 1125139 . + . ID=gene-NLI98_RS05535;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=NLI98_RS05535;old_locus_tag=NLI98_05530 NZ_CP100601.1 Protein Homology CDS 1124639 1125139 . + 0 ID=cds-WP_004213244.1;Parent=gene-NLI98_RS05535;Dbxref=Genbank:WP_004213244.1;Name=WP_004213244.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228401.1;locus_tag=NLI98_RS05535;product=recombination regulator RecX;protein_id=WP_004213244.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1125390 1128017 . + . ID=gene-NLI98_RS05540;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=NLI98_RS05540;old_locus_tag=NLI98_05535 NZ_CP100601.1 Protein Homology CDS 1125390 1128017 . + 0 ID=cds-WP_002914765.1;Parent=gene-NLI98_RS05540;Dbxref=Genbank:WP_002914765.1;Name=WP_002914765.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228400.1;locus_tag=NLI98_RS05540;product=alanine--tRNA ligase;protein_id=WP_002914765.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1128381 1128566 . + . ID=gene-NLI98_RS05545;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=NLI98_RS05545;old_locus_tag=NLI98_05540 NZ_CP100601.1 Protein Homology CDS 1128381 1128566 . + 0 ID=cds-WP_000906486.1;Parent=gene-NLI98_RS05545;Dbxref=Genbank:WP_000906486.1;Name=WP_000906486.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001774971.1;locus_tag=NLI98_RS05545;product=carbon storage regulator CsrA;protein_id=WP_000906486.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1128889 1128981 . + . ID=gene-NLI98_RS05550;Name=NLI98_RS05550;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS05550;old_locus_tag=NLI98_05545 NZ_CP100601.1 tRNAscan-SE tRNA 1128889 1128981 . + . ID=rna-NLI98_RS05550;Parent=gene-NLI98_RS05550;anticodon=(pos:1128923..1128925);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS05550;product=tRNA-Ser NZ_CP100601.1 tRNAscan-SE exon 1128889 1128981 . + . ID=exon-NLI98_RS05550-1;Parent=rna-NLI98_RS05550;anticodon=(pos:1128923..1128925);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS05550;product=tRNA-Ser NZ_CP100601.1 RefSeq gene 1128986 1129062 . + . ID=gene-NLI98_RS05555;Name=NLI98_RS05555;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS05555;old_locus_tag=NLI98_05550 NZ_CP100601.1 tRNAscan-SE tRNA 1128986 1129062 . + . ID=rna-NLI98_RS05555;Parent=gene-NLI98_RS05555;anticodon=(pos:1129020..1129022);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS05555;product=tRNA-Arg NZ_CP100601.1 tRNAscan-SE exon 1128986 1129062 . + . ID=exon-NLI98_RS05555-1;Parent=rna-NLI98_RS05555;anticodon=(pos:1129020..1129022);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS05555;product=tRNA-Arg NZ_CP100601.1 RefSeq gene 1129213 1129289 . + . ID=gene-NLI98_RS05560;Name=NLI98_RS05560;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS05560;old_locus_tag=NLI98_05555 NZ_CP100601.1 tRNAscan-SE tRNA 1129213 1129289 . + . ID=rna-NLI98_RS05560;Parent=gene-NLI98_RS05560;anticodon=(pos:1129247..1129249);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS05560;product=tRNA-Arg NZ_CP100601.1 tRNAscan-SE exon 1129213 1129289 . + . ID=exon-NLI98_RS05560-1;Parent=rna-NLI98_RS05560;anticodon=(pos:1129247..1129249);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS05560;product=tRNA-Arg NZ_CP100601.1 RefSeq gene 1129351 1129427 . + . ID=gene-NLI98_RS05565;Name=NLI98_RS05565;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS05565;old_locus_tag=NLI98_05560 NZ_CP100601.1 tRNAscan-SE tRNA 1129351 1129427 . + . ID=rna-NLI98_RS05565;Parent=gene-NLI98_RS05565;anticodon=(pos:1129385..1129387);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS05565;product=tRNA-Arg NZ_CP100601.1 tRNAscan-SE exon 1129351 1129427 . + . ID=exon-NLI98_RS05565-1;Parent=rna-NLI98_RS05565;anticodon=(pos:1129385..1129387);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS05565;product=tRNA-Arg NZ_CP100601.1 RefSeq gene 1129656 1129732 . + . ID=gene-NLI98_RS05570;Name=NLI98_RS05570;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS05570;old_locus_tag=NLI98_05565 NZ_CP100601.1 tRNAscan-SE tRNA 1129656 1129732 . + . ID=rna-NLI98_RS05570;Parent=gene-NLI98_RS05570;anticodon=(pos:1129690..1129692);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS05570;product=tRNA-Arg NZ_CP100601.1 tRNAscan-SE exon 1129656 1129732 . + . ID=exon-NLI98_RS05570-1;Parent=rna-NLI98_RS05570;anticodon=(pos:1129690..1129692);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS05570;product=tRNA-Arg NZ_CP100601.1 RefSeq gene 1130087 1130401 . + . ID=gene-NLI98_RS05575;Name=NLI98_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05575;old_locus_tag=NLI98_05570 NZ_CP100601.1 Protein Homology CDS 1130087 1130401 . + 0 ID=cds-WP_002914359.1;Parent=gene-NLI98_RS05575;Dbxref=Genbank:WP_002914359.1;Name=WP_002914359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228397.1;locus_tag=NLI98_RS05575;product=BON domain-containing protein;protein_id=WP_002914359.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1130527 1131093 . + . ID=gene-NLI98_RS05580;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=NLI98_RS05580;old_locus_tag=NLI98_05575 NZ_CP100601.1 Protein Homology CDS 1130527 1131093 . + 0 ID=cds-WP_004174701.1;Parent=gene-NLI98_RS05580;Dbxref=Genbank:WP_004174701.1;Name=WP_004174701.1;gbkey=CDS;gene=yqaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228396.1;locus_tag=NLI98_RS05580;product=fructose-1-phosphate/6-phosphogluconate phosphatase;protein_id=WP_004174701.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1131090 1131518 . + . ID=gene-NLI98_RS05585;Name=NLI98_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05585;old_locus_tag=NLI98_05580 NZ_CP100601.1 Protein Homology CDS 1131090 1131518 . + 0 ID=cds-WP_002914355.1;Parent=gene-NLI98_RS05585;Dbxref=Genbank:WP_002914355.1;Name=WP_002914355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228395.1;locus_tag=NLI98_RS05585;product=DedA family protein;protein_id=WP_002914355.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1131585 1133141 . + . ID=gene-NLI98_RS05590;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=NLI98_RS05590;old_locus_tag=NLI98_05585 NZ_CP100601.1 Protein Homology CDS 1131585 1133141 . + 0 ID=cds-WP_064279053.1;Parent=gene-NLI98_RS05590;Dbxref=Genbank:WP_064279053.1;Name=WP_064279053.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228394.1;locus_tag=NLI98_RS05590;product=glutamate--cysteine ligase;protein_id=WP_064279053.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1133298 1133813 . + . ID=gene-NLI98_RS05595;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=NLI98_RS05595;old_locus_tag=NLI98_05590 NZ_CP100601.1 Protein Homology CDS 1133298 1133813 . + 0 ID=cds-WP_002914351.1;Parent=gene-NLI98_RS05595;Dbxref=Genbank:WP_002914351.1;Name=WP_002914351.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=NLI98_RS05595;product=S-ribosylhomocysteine lyase;protein_id=WP_002914351.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1133866 1134633 . + . ID=gene-NLI98_RS05600;Name=NLI98_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05600;old_locus_tag=NLI98_05595 NZ_CP100601.1 Protein Homology CDS 1133866 1134633 . + 0 ID=cds-WP_004149452.1;Parent=gene-NLI98_RS05600;Dbxref=Genbank:WP_004149452.1;Name=WP_004149452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228392.1;locus_tag=NLI98_RS05600;product=helix-turn-helix transcriptional regulator;protein_id=WP_004149452.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1134612 1136288 . - . ID=gene-NLI98_RS05605;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=NLI98_RS05605;old_locus_tag=NLI98_05600 NZ_CP100601.1 Protein Homology CDS 1134612 1136288 . - 0 ID=cds-WP_004185353.1;Parent=gene-NLI98_RS05605;Dbxref=Genbank:WP_004185353.1;Name=WP_004185353.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228391.1;locus_tag=NLI98_RS05605;product=2-isopropylmalate synthase;protein_id=WP_004185353.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1136425 1137963 . - . ID=gene-NLI98_RS05610;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=NLI98_RS05610;old_locus_tag=NLI98_05605 NZ_CP100601.1 Protein Homology CDS 1136425 1137963 . - 0 ID=cds-WP_002914342.1;Parent=gene-NLI98_RS05610;Dbxref=Genbank:WP_002914342.1;Name=WP_002914342.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=emrB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228390.1;locus_tag=NLI98_RS05610;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_002914342.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1137979 1139151 . - . ID=gene-NLI98_RS05615;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=NLI98_RS05615;old_locus_tag=NLI98_05610 NZ_CP100601.1 Protein Homology CDS 1137979 1139151 . - 0 ID=cds-WP_002914339.1;Parent=gene-NLI98_RS05615;Dbxref=Genbank:WP_002914339.1;Name=WP_002914339.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228389.1;locus_tag=NLI98_RS05615;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_002914339.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1139277 1139807 . - . ID=gene-NLI98_RS05620;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=NLI98_RS05620;old_locus_tag=NLI98_05615 NZ_CP100601.1 Protein Homology CDS 1139277 1139807 . - 0 ID=cds-WP_002914337.1;Parent=gene-NLI98_RS05620;Dbxref=Genbank:WP_002914337.1;Name=WP_002914337.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228387.1;locus_tag=NLI98_RS05620;product=transcriptional repressor MprA;protein_id=WP_002914337.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1139898 1140233 . - . ID=gene-NLI98_RS05625;Name=ygaH;gbkey=Gene;gene=ygaH;gene_biotype=protein_coding;locus_tag=NLI98_RS05625;old_locus_tag=NLI98_05620 NZ_CP100601.1 Protein Homology CDS 1139898 1140233 . - 0 ID=cds-WP_004174712.1;Parent=gene-NLI98_RS05625;Dbxref=Genbank:WP_004174712.1;Name=WP_004174712.1;gbkey=CDS;gene=ygaH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228385.1;locus_tag=NLI98_RS05625;product=L-valine transporter subunit YgaH;protein_id=WP_004174712.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1140223 1140969 . - . ID=gene-NLI98_RS05630;Name=NLI98_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05630;old_locus_tag=NLI98_05625 NZ_CP100601.1 Protein Homology CDS 1140223 1140969 . - 0 ID=cds-WP_002914333.1;Parent=gene-NLI98_RS05630;Dbxref=Genbank:WP_002914333.1;Name=WP_002914333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228384.1;locus_tag=NLI98_RS05630;product=AzlC family ABC transporter permease;protein_id=WP_002914333.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1141147 1142145 . - . ID=gene-NLI98_RS05635;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=NLI98_RS05635;old_locus_tag=NLI98_05630 NZ_CP100601.1 Protein Homology CDS 1141147 1142145 . - 0 ID=cds-WP_002914330.1;Parent=gene-NLI98_RS05635;Dbxref=Genbank:WP_002914330.1;Name=WP_002914330.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228383.1;locus_tag=NLI98_RS05635;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_002914330.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1142224 1143291 . - . ID=gene-NLI98_RS05640;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=NLI98_RS05640;old_locus_tag=NLI98_05635 NZ_CP100601.1 Protein Homology CDS 1142224 1143291 . - 0 ID=cds-WP_032104395.1;Parent=gene-NLI98_RS05640;Dbxref=Genbank:WP_032104395.1;Name=WP_032104395.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228382.1;locus_tag=NLI98_RS05640;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_032104395.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1143284 1144486 . - . ID=gene-NLI98_RS05645;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=NLI98_RS05645;old_locus_tag=NLI98_05640 NZ_CP100601.1 Protein Homology CDS 1143284 1144486 . - 0 ID=cds-WP_002914328.1;Parent=gene-NLI98_RS05645;Dbxref=Genbank:WP_002914328.1;Name=WP_002914328.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228381.1;locus_tag=NLI98_RS05645;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_002914328.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1144843 1145805 . - . ID=gene-NLI98_RS05650;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=NLI98_RS05650;old_locus_tag=NLI98_05645 NZ_CP100601.1 Protein Homology CDS 1144843 1145805 . - 0 ID=cds-WP_046653529.1;Parent=gene-NLI98_RS05650;Dbxref=Genbank:WP_046653529.1;Name=WP_046653529.1;Ontology_term=GO:0009265,GO:0004748,GO:0030145,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,manganese ion binding|0030145||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228380.1;locus_tag=NLI98_RS05650;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_046653529.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1145816 1147957 . - . ID=gene-NLI98_RS05655;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=NLI98_RS05655;old_locus_tag=NLI98_05650 NZ_CP100601.1 Protein Homology CDS 1145816 1147957 . - 0 ID=cds-WP_002914325.1;Parent=gene-NLI98_RS05655;Dbxref=Genbank:WP_002914325.1;Name=WP_002914325.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228379.1;locus_tag=NLI98_RS05655;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_002914325.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1147930 1148340 . - . ID=gene-NLI98_RS05660;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=NLI98_RS05660;old_locus_tag=NLI98_05655 NZ_CP100601.1 Protein Homology CDS 1147930 1148340 . - 0 ID=cds-WP_002914321.1;Parent=gene-NLI98_RS05660;Dbxref=Genbank:WP_002914321.1;Name=WP_002914321.1;Ontology_term=GO:0009263;gbkey=CDS;gene=nrdI;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228378.1;locus_tag=NLI98_RS05660;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_002914321.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1148337 1148582 . - . ID=gene-NLI98_RS05665;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=NLI98_RS05665;old_locus_tag=NLI98_05660 NZ_CP100601.1 Protein Homology CDS 1148337 1148582 . - 0 ID=cds-WP_002914320.1;Parent=gene-NLI98_RS05665;Dbxref=Genbank:WP_002914320.1;Name=WP_002914320.1;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228377.1;locus_tag=NLI98_RS05665;product=glutaredoxin-like protein NrdH;protein_id=WP_002914320.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1148766 1149197 . - . ID=gene-NLI98_RS05670;Name=NLI98_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05670;old_locus_tag=NLI98_05665 NZ_CP100601.1 Protein Homology CDS 1148766 1149197 . - 0 ID=cds-WP_004151037.1;Parent=gene-NLI98_RS05670;Dbxref=Genbank:WP_004151037.1;Name=WP_004151037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228376.1;locus_tag=NLI98_RS05670;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_004151037.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1149286 1150638 . + . ID=gene-NLI98_RS05675;Name=NLI98_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05675;old_locus_tag=NLI98_05670 NZ_CP100601.1 Protein Homology CDS 1149286 1150638 . + 0 ID=cds-WP_088498529.1;Parent=gene-NLI98_RS05675;Dbxref=Genbank:WP_088498529.1;Name=WP_088498529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228375.1;locus_tag=NLI98_RS05675;product=PLP-dependent aminotransferase family protein;protein_id=WP_088498529.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1150782 1151129 . - . ID=gene-NLI98_RS05680;Name=NLI98_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05680;old_locus_tag=NLI98_05675 NZ_CP100601.1 Protein Homology CDS 1150782 1151129 . - 0 ID=cds-WP_002914293.1;Parent=gene-NLI98_RS05680;Dbxref=Genbank:WP_002914293.1;Name=WP_002914293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228374.1;locus_tag=NLI98_RS05680;product=DUF883 domain-containing protein;protein_id=WP_002914293.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1151279 1151641 . + . ID=gene-NLI98_RS05685;Name=NLI98_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05685;old_locus_tag=NLI98_05680 NZ_CP100601.1 Protein Homology CDS 1151279 1151641 . + 0 ID=cds-WP_002914291.1;Parent=gene-NLI98_RS05685;Dbxref=Genbank:WP_002914291.1;Name=WP_002914291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228373.1;locus_tag=NLI98_RS05685;product=DUF2002 family protein;protein_id=WP_002914291.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1151727 1152176 . - . ID=gene-NLI98_RS05690;Name=alaE;gbkey=Gene;gene=alaE;gene_biotype=protein_coding;locus_tag=NLI98_RS05690;old_locus_tag=NLI98_05685 NZ_CP100601.1 Protein Homology CDS 1151727 1152176 . - 0 ID=cds-WP_002914289.1;Parent=gene-NLI98_RS05690;Dbxref=Genbank:WP_002914289.1;Name=WP_002914289.1;gbkey=CDS;gene=alaE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228372.1;locus_tag=NLI98_RS05690;product=L-alanine exporter AlaE;protein_id=WP_002914289.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1152905 1153306 . + . ID=gene-NLI98_RS05695;Name=stpA;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=NLI98_RS05695;old_locus_tag=NLI98_05690 NZ_CP100601.1 Protein Homology CDS 1152905 1153306 . + 0 ID=cds-WP_002914287.1;Parent=gene-NLI98_RS05695;Dbxref=Genbank:WP_002914287.1;Name=WP_002914287.1;gbkey=CDS;gene=stpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205720.1;locus_tag=NLI98_RS05695;product=DNA-binding protein StpA;protein_id=WP_002914287.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1153379 1153558 . - . ID=gene-NLI98_RS05700;Name=NLI98_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05700;old_locus_tag=NLI98_05695 NZ_CP100601.1 Protein Homology CDS 1153379 1153558 . - 0 ID=cds-WP_002914284.1;Parent=gene-NLI98_RS05700;Dbxref=Genbank:WP_002914284.1;Name=WP_002914284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228369.1;locus_tag=NLI98_RS05700;product=hypothetical protein;protein_id=WP_002914284.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1153764 1154666 . + . ID=gene-NLI98_RS05705;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=NLI98_RS05705;old_locus_tag=NLI98_05700 NZ_CP100601.1 Protein Homology CDS 1153764 1154666 . + 0 ID=cds-WP_002914281.1;Parent=gene-NLI98_RS05705;Dbxref=Genbank:WP_002914281.1;Name=WP_002914281.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228368.1;locus_tag=NLI98_RS05705;product=lipid A hydroxylase LpxO;protein_id=WP_002914281.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1154647 1155192 . - . ID=gene-NLI98_RS05710;Name=NLI98_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05710;old_locus_tag=NLI98_05705 NZ_CP100601.1 Protein Homology CDS 1154647 1155192 . - 0 ID=cds-WP_004145720.1;Parent=gene-NLI98_RS05710;Dbxref=Genbank:WP_004145720.1;Name=WP_004145720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228367.1;locus_tag=NLI98_RS05710;product=rhodanese family protein;protein_id=WP_004145720.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1155200 1155499 . - . ID=gene-NLI98_RS05715;Name=NLI98_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05715;old_locus_tag=NLI98_05710 NZ_CP100601.1 Protein Homology CDS 1155200 1155499 . - 0 ID=cds-WP_002914277.1;Parent=gene-NLI98_RS05715;Dbxref=Genbank:WP_002914277.1;Name=WP_002914277.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228366.1;locus_tag=NLI98_RS05715;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_002914277.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1155575 1156180 . - . ID=gene-NLI98_RS05720;Name=NLI98_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05720;old_locus_tag=NLI98_05715 NZ_CP100601.1 Protein Homology CDS 1155575 1156180 . - 0 ID=cds-WP_004174743.1;Parent=gene-NLI98_RS05720;Dbxref=Genbank:WP_004174743.1;Name=WP_004174743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228365.1;locus_tag=NLI98_RS05720;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_004174743.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1156284 1157192 . + . ID=gene-NLI98_RS05725;Name=NLI98_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05725;old_locus_tag=NLI98_05720 NZ_CP100601.1 Protein Homology CDS 1156284 1157192 . + 0 ID=cds-WP_004145715.1;Parent=gene-NLI98_RS05725;Dbxref=Genbank:WP_004145715.1;Name=WP_004145715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228364.1;locus_tag=NLI98_RS05725;product=LysR family transcriptional regulator;protein_id=WP_004145715.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1157275 1159062 . - . ID=gene-NLI98_RS05730;Name=NLI98_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05730;old_locus_tag=NLI98_05725 NZ_CP100601.1 Protein Homology CDS 1157275 1159062 . - 0 ID=cds-WP_004180977.1;Parent=gene-NLI98_RS05730;Dbxref=Genbank:WP_004180977.1;Name=WP_004180977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228363.1;locus_tag=NLI98_RS05730;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_004180977.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1159327 1160847 . + . ID=gene-NLI98_RS05735;Name=NLI98_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05735;old_locus_tag=NLI98_05730 NZ_CP100601.1 Protein Homology CDS 1159327 1160847 . + 0 ID=cds-WP_004174747.1;Parent=gene-NLI98_RS05735;Dbxref=Genbank:WP_004174747.1;Name=WP_004174747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015370094.1;locus_tag=NLI98_RS05735;product=aldehyde dehydrogenase;protein_id=WP_004174747.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1161549 1162130 . + . ID=gene-NLI98_RS05740;Name=NLI98_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05740;old_locus_tag=NLI98_05735 NZ_CP100601.1 Protein Homology CDS 1161549 1162130 . + 0 ID=cds-WP_004145710.1;Parent=gene-NLI98_RS05740;Dbxref=Genbank:WP_004145710.1;Name=WP_004145710.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914266.1;locus_tag=NLI98_RS05740;product=fimbrial protein;protein_id=WP_004145710.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1162325 1162987 . + . ID=gene-NLI98_RS05745;Name=NLI98_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05745;old_locus_tag=NLI98_05740 NZ_CP100601.1 Protein Homology CDS 1162325 1162987 . + 0 ID=cds-WP_004185341.1;Parent=gene-NLI98_RS05745;Dbxref=Genbank:WP_004185341.1;Name=WP_004185341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185341.1;locus_tag=NLI98_RS05745;product=molecular chaperone;protein_id=WP_004185341.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1163024 1165579 . + . ID=gene-NLI98_RS05750;Name=NLI98_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05750;old_locus_tag=NLI98_05745 NZ_CP100601.1 Protein Homology CDS 1163024 1165579 . + 0 ID=cds-WP_050503298.1;Parent=gene-NLI98_RS05750;Dbxref=Genbank:WP_050503298.1;Name=WP_050503298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004180975.1;locus_tag=NLI98_RS05750;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_050503298.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1165587 1166681 . + . ID=gene-NLI98_RS05755;Name=NLI98_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05755;old_locus_tag=NLI98_05750 NZ_CP100601.1 Protein Homology CDS 1165587 1166681 . + 0 ID=cds-WP_004180974.1;Parent=gene-NLI98_RS05755;Dbxref=Genbank:WP_004180974.1;Name=WP_004180974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205734.1;locus_tag=NLI98_RS05755;product=fimbrial protein;protein_id=WP_004180974.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1166694 1167722 . - . ID=gene-NLI98_RS05760;Name=NLI98_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05760;old_locus_tag=NLI98_05755 NZ_CP100601.1 Protein Homology CDS 1166694 1167722 . - 0 ID=cds-WP_020803759.1;Parent=gene-NLI98_RS05760;Dbxref=Genbank:WP_020803759.1;Name=WP_020803759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803759.1;locus_tag=NLI98_RS05760;product=fimbrial protein;protein_id=WP_020803759.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1167725 1170262 . - . ID=gene-NLI98_RS05765;Name=NLI98_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05765;old_locus_tag=NLI98_05760 NZ_CP100601.1 Protein Homology CDS 1167725 1170262 . - 0 ID=cds-WP_064279058.1;Parent=gene-NLI98_RS05765;Dbxref=Genbank:WP_064279058.1;Name=WP_064279058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212901.1;locus_tag=NLI98_RS05765;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_064279058.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1170292 1170960 . - . ID=gene-NLI98_RS05770;Name=NLI98_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05770;old_locus_tag=NLI98_05765 NZ_CP100601.1 Protein Homology CDS 1170292 1170960 . - 0 ID=cds-WP_040165678.1;Parent=gene-NLI98_RS05770;Dbxref=Genbank:WP_040165678.1;Name=WP_040165678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914261.1;locus_tag=NLI98_RS05770;product=molecular chaperone;protein_id=WP_040165678.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1171002 1171550 . - . ID=gene-NLI98_RS05775;Name=NLI98_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05775;old_locus_tag=NLI98_05770 NZ_CP100601.1 Protein Homology CDS 1171002 1171550 . - 0 ID=cds-WP_023284152.1;Parent=gene-NLI98_RS05775;Dbxref=Genbank:WP_023284152.1;Name=WP_023284152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802021.1;locus_tag=NLI98_RS05775;product=type 1 fimbrial protein;protein_id=WP_023284152.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1171654 1172271 . - . ID=gene-NLI98_RS05780;Name=NLI98_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05780;old_locus_tag=NLI98_05775 NZ_CP100601.1 Protein Homology CDS 1171654 1172271 . - 0 ID=cds-WP_004218900.1;Parent=gene-NLI98_RS05780;Dbxref=Genbank:WP_004218900.1;Name=WP_004218900.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020316947.1;locus_tag=NLI98_RS05780;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_004218900.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1172625 1173473 . + . ID=gene-NLI98_RS05785;Name=NLI98_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05785;old_locus_tag=NLI98_05780 NZ_CP100601.1 Protein Homology CDS 1172625 1173473 . + 0 ID=cds-WP_048265926.1;Parent=gene-NLI98_RS05785;Dbxref=Genbank:WP_048265926.1;Name=WP_048265926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831578.1;locus_tag=NLI98_RS05785;product=transporter substrate-binding domain-containing protein;protein_id=WP_048265926.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1173529 1174149 . - . ID=gene-NLI98_RS05790;Name=NLI98_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05790;old_locus_tag=NLI98_05785 NZ_CP100601.1 Protein Homology CDS 1173529 1174149 . - 0 ID=cds-WP_004145700.1;Parent=gene-NLI98_RS05790;Dbxref=Genbank:WP_004145700.1;Name=WP_004145700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012967387.1;locus_tag=NLI98_RS05790;product=hypothetical protein;protein_id=WP_004145700.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1174305 1175099 . - . ID=gene-NLI98_RS05795;Name=NLI98_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05795;old_locus_tag=NLI98_05790 NZ_CP100601.1 Protein Homology CDS 1174305 1175099 . - 0 ID=cds-WP_023328397.1;Parent=gene-NLI98_RS05795;Dbxref=Genbank:WP_023328397.1;Name=WP_023328397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704834.1;locus_tag=NLI98_RS05795;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_023328397.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1175160 1176092 . - . ID=gene-NLI98_RS05800;Name=NLI98_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05800;old_locus_tag=NLI98_05795 NZ_CP100601.1 Protein Homology CDS 1175160 1176092 . - 0 ID=cds-WP_088498527.1;Parent=gene-NLI98_RS05800;Dbxref=Genbank:WP_088498527.1;Name=WP_088498527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014907069.1;locus_tag=NLI98_RS05800;product=glyoxylate/hydroxypyruvate reductase A;protein_id=WP_088498527.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1176098 1176826 . - . ID=gene-NLI98_RS05805;Name=NLI98_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05805;old_locus_tag=NLI98_05800 NZ_CP100601.1 Protein Homology CDS 1176098 1176826 . - 0 ID=cds-WP_004212908.1;Parent=gene-NLI98_RS05805;Dbxref=Genbank:WP_004212908.1;Name=WP_004212908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004174769.1;locus_tag=NLI98_RS05805;product=class II aldolase/adducin family protein;protein_id=WP_004212908.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1176827 1178347 . - . ID=gene-NLI98_RS05810;Name=NLI98_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05810;old_locus_tag=NLI98_05805 NZ_CP100601.1 Protein Homology CDS 1176827 1178347 . - 0 ID=cds-WP_065888487.1;Parent=gene-NLI98_RS05810;Dbxref=Genbank:WP_065888487.1;Name=WP_065888487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012967389.1;locus_tag=NLI98_RS05810;product=amino acid ABC transporter permease/ATP-binding protein;protein_id=WP_065888487.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1178378 1179181 . - . ID=gene-NLI98_RS05815;Name=NLI98_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05815;old_locus_tag=NLI98_05810 NZ_CP100601.1 Protein Homology CDS 1178378 1179181 . - 0 ID=cds-WP_004180963.1;Parent=gene-NLI98_RS05815;Dbxref=Genbank:WP_004180963.1;Name=WP_004180963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004180963.1;locus_tag=NLI98_RS05815;product=ABC transporter substrate-binding protein;protein_id=WP_004180963.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1179201 1180268 . - . ID=gene-NLI98_RS05820;Name=NLI98_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05820;old_locus_tag=NLI98_05815 NZ_CP100601.1 Protein Homology CDS 1179201 1180268 . - 0 ID=cds-WP_004180962.1;Parent=gene-NLI98_RS05820;Dbxref=Genbank:WP_004180962.1;Name=WP_004180962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004174771.1;locus_tag=NLI98_RS05820;product=isopenicillin N synthase family oxygenase;protein_id=WP_004180962.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1180265 1181128 . - . ID=gene-NLI98_RS05825;Name=NLI98_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05825;old_locus_tag=NLI98_05820 NZ_CP100601.1 Protein Homology CDS 1180265 1181128 . - 0 ID=cds-WP_021440583.1;Parent=gene-NLI98_RS05825;Dbxref=Genbank:WP_021440583.1;Name=WP_021440583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012967390.1;locus_tag=NLI98_RS05825;product=TIM barrel protein;protein_id=WP_021440583.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1181139 1182089 . - . ID=gene-NLI98_RS05830;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=NLI98_RS05830;old_locus_tag=NLI98_05825 NZ_CP100601.1 Protein Homology CDS 1181139 1182089 . - 0 ID=cds-WP_032418434.1;Parent=gene-NLI98_RS05830;Dbxref=Genbank:WP_032418434.1;Name=WP_032418434.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015958844.1;locus_tag=NLI98_RS05830;product=agmatinase;protein_id=WP_032418434.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1182205 1183116 . + . ID=gene-NLI98_RS05835;Name=NLI98_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05835;old_locus_tag=NLI98_05830 NZ_CP100601.1 Protein Homology CDS 1182205 1183116 . + 0 ID=cds-WP_002914199.1;Parent=gene-NLI98_RS05835;Dbxref=Genbank:WP_002914199.1;Name=WP_002914199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704830.1;locus_tag=NLI98_RS05835;product=LysR family transcriptional regulator;protein_id=WP_002914199.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1183530 1184009 . + . ID=gene-NLI98_RS05840;Name=NLI98_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05840;old_locus_tag=NLI98_05835 NZ_CP100601.1 Protein Homology CDS 1183530 1184009 . + 0 ID=cds-WP_000888203.1;Parent=gene-NLI98_RS05840;Dbxref=Genbank:WP_000888203.1;Name=WP_000888203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900633.1;locus_tag=NLI98_RS05840;product=Rrf2 family transcriptional regulator;protein_id=WP_000888203.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1184079 1187231 . - . ID=gene-NLI98_RS05845;Name=NLI98_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05845;old_locus_tag=NLI98_05840 NZ_CP100601.1 Protein Homology CDS 1184079 1187231 . - 0 ID=cds-WP_004174783.1;Parent=gene-NLI98_RS05845;Dbxref=Genbank:WP_004174783.1;Name=WP_004174783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_021312368.1;locus_tag=NLI98_RS05845;product=multidrug efflux RND transporter permease subunit OqxB5;protein_id=WP_004174783.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1187255 1188430 . - . ID=gene-NLI98_RS05850;Name=oqxA;gbkey=Gene;gene=oqxA;gene_biotype=protein_coding;locus_tag=NLI98_RS05850;old_locus_tag=NLI98_05845 NZ_CP100601.1 Protein Homology CDS 1187255 1188430 . - 0 ID=cds-WP_049191207.1;Parent=gene-NLI98_RS05850;Dbxref=Genbank:WP_049191207.1;Name=WP_049191207.1;gbkey=CDS;gene=oqxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914189.1;locus_tag=NLI98_RS05850;product=multidrug efflux RND transporter periplasmic adaptor subunit OqxA;protein_id=WP_049191207.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1188764 1189126 . + . ID=gene-NLI98_RS05855;Name=NLI98_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05855;old_locus_tag=NLI98_05850 NZ_CP100601.1 Protein Homology CDS 1188764 1189126 . + 0 ID=cds-WP_085783913.1;Parent=gene-NLI98_RS05855;Dbxref=Genbank:WP_085783913.1;Name=WP_085783913.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004899979.1;locus_tag=NLI98_RS05855;product=helix-turn-helix domain-containing protein;protein_id=WP_085783913.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1189137 1189709 . - . ID=gene-NLI98_RS05860;Name=NLI98_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05860;old_locus_tag=NLI98_05855 NZ_CP100601.1 Protein Homology CDS 1189137 1189709 . - 0 ID=cds-WP_004174789.1;Parent=gene-NLI98_RS05860;Dbxref=Genbank:WP_004174789.1;Name=WP_004174789.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002914180.1;locus_tag=NLI98_RS05860;product=flavin reductase;protein_id=WP_004174789.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1189921 1190805 . + . ID=gene-NLI98_RS05865;Name=NLI98_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05865;old_locus_tag=NLI98_05860 NZ_CP100601.1 Protein Homology CDS 1189921 1190805 . + 0 ID=cds-WP_002914178.1;Parent=gene-NLI98_RS05865;Dbxref=Genbank:WP_002914178.1;Name=WP_002914178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012967415.1;locus_tag=NLI98_RS05865;product=LysR family transcriptional regulator;protein_id=WP_002914178.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1190930 1191730 . + . ID=gene-NLI98_RS05870;Name=NLI98_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05870;old_locus_tag=NLI98_05865 NZ_CP100601.1 Protein Homology CDS 1190930 1191730 . + 0 ID=cds-WP_004180956.1;Parent=gene-NLI98_RS05870;Dbxref=Genbank:WP_004180956.1;Name=WP_004180956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004890330.1;locus_tag=NLI98_RS05870;product=hypothetical protein;protein_id=WP_004180956.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1192456 1193190 . - . ID=gene-NLI98_RS05875;Name=NLI98_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05875;old_locus_tag=NLI98_05870 NZ_CP100601.1 GeneMarkS-2+ CDS 1192456 1193190 . - 0 ID=cds-WP_128205769.1;Parent=gene-NLI98_RS05875;Dbxref=Genbank:WP_128205769.1;Name=WP_128205769.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS05875;product=hypothetical protein;protein_id=WP_128205769.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1193192 1193992 . - . ID=gene-NLI98_RS05880;Name=NLI98_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05880;old_locus_tag=NLI98_05875 NZ_CP100601.1 Protein Homology CDS 1193192 1193992 . - 0 ID=cds-WP_227627133.1;Parent=gene-NLI98_RS05880;Dbxref=Genbank:WP_227627133.1;Name=WP_227627133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000426255.1;locus_tag=NLI98_RS05880;product=hypothetical protein;protein_id=WP_227627133.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1194402 1196735 . - . ID=gene-NLI98_RS05885;Name=NLI98_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05885;old_locus_tag=NLI98_05880 NZ_CP100601.1 Protein Homology CDS 1194402 1196735 . - 0 ID=cds-WP_128205771.1;Parent=gene-NLI98_RS05885;Dbxref=Genbank:WP_128205771.1;Name=WP_128205771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225302.1;locus_tag=NLI98_RS05885;product=primase-like DNA-binding domain-containing protein;protein_id=WP_128205771.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1196747 1197067 . - . ID=gene-NLI98_RS05890;Name=NLI98_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05890;old_locus_tag=NLI98_05885 NZ_CP100601.1 Protein Homology CDS 1196747 1197067 . - 0 ID=cds-WP_032433269.1;Parent=gene-NLI98_RS05890;Dbxref=Genbank:WP_032433269.1;Name=WP_032433269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224852.1;locus_tag=NLI98_RS05890;product=DUF5375 domain-containing protein;protein_id=WP_032433269.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1197064 1197291 . - . ID=gene-NLI98_RS05895;Name=NLI98_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05895;old_locus_tag=NLI98_05890 NZ_CP100601.1 Protein Homology CDS 1197064 1197291 . - 0 ID=cds-WP_004136110.1;Parent=gene-NLI98_RS05895;Dbxref=Genbank:WP_004136110.1;Name=WP_004136110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224851.1;locus_tag=NLI98_RS05895;product=hypothetical protein;protein_id=WP_004136110.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1197288 1197482 . - . ID=gene-NLI98_RS05900;Name=NLI98_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05900;old_locus_tag=NLI98_05895 NZ_CP100601.1 Protein Homology CDS 1197288 1197482 . - 0 ID=cds-WP_032433479.1;Parent=gene-NLI98_RS05900;Dbxref=Genbank:WP_032433479.1;Name=WP_032433479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224850.1;locus_tag=NLI98_RS05900;product=host cell division inhibitor Icd-like protein;protein_id=WP_032433479.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1197507 1197839 . - . ID=gene-NLI98_RS05905;Name=NLI98_RS05905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS05905;old_locus_tag=NLI98_05900;partial=true;pseudo=true;start_range=.,1197507 NZ_CP100601.1 Protein Homology CDS 1197507 1197839 . - 0 ID=cds-NLI98_RS05905;Parent=gene-NLI98_RS05905;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022029.2;locus_tag=NLI98_RS05905;partial=true;product=ash family protein;pseudo=true;start_range=.,1197507;transl_table=11 NZ_CP100601.1 RefSeq gene 1197842 1198108 . - . ID=gene-NLI98_RS05910;Name=NLI98_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05910;old_locus_tag=NLI98_05905 NZ_CP100601.1 Protein Homology CDS 1197842 1198108 . - 0 ID=cds-WP_044613203.1;Parent=gene-NLI98_RS05910;Dbxref=Genbank:WP_044613203.1;Name=WP_044613203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224849.1;locus_tag=NLI98_RS05910;product=AlpA family transcriptional regulator;protein_id=WP_044613203.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1198647 1199384 . + . ID=gene-NLI98_RS05915;Name=NLI98_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05915;old_locus_tag=NLI98_05910 NZ_CP100601.1 Protein Homology CDS 1198647 1199384 . + 0 ID=cds-WP_128205775.1;Parent=gene-NLI98_RS05915;Dbxref=Genbank:WP_128205775.1;Name=WP_128205775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224848.1;locus_tag=NLI98_RS05915;product=glycoprotein 3;protein_id=WP_128205775.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1199381 1199626 . + . ID=gene-NLI98_RS05920;Name=NLI98_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05920;old_locus_tag=NLI98_05915 NZ_CP100601.1 Protein Homology CDS 1199381 1199626 . + 0 ID=cds-WP_213894683.1;Parent=gene-NLI98_RS05920;Dbxref=Genbank:WP_213894683.1;Name=WP_213894683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224847.1;locus_tag=NLI98_RS05920;product=ogr/Delta-like zinc finger family protein;protein_id=WP_213894683.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1199644 1200210 . + . ID=gene-NLI98_RS05925;Name=NLI98_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05925;old_locus_tag=NLI98_05920 NZ_CP100601.1 Protein Homology CDS 1199644 1200210 . + 0 ID=cds-WP_128205779.1;Parent=gene-NLI98_RS05925;Dbxref=Genbank:WP_128205779.1;Name=WP_128205779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225310.1;locus_tag=NLI98_RS05925;product=Polarity suppression protein;protein_id=WP_128205779.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1200423 1201721 . - . ID=gene-NLI98_RS05930;Name=NLI98_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05930;old_locus_tag=NLI98_05925 NZ_CP100601.1 Protein Homology CDS 1200423 1201721 . - 0 ID=cds-WP_264452157.1;Parent=gene-NLI98_RS05930;Dbxref=Genbank:WP_264452157.1;Name=WP_264452157.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025637.2;locus_tag=NLI98_RS05930;product=hypothetical protein;protein_id=WP_264452157.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1201718 1202929 . - . ID=gene-NLI98_RS05935;Name=NLI98_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05935;old_locus_tag=NLI98_05930 NZ_CP100601.1 Protein Homology CDS 1201718 1202929 . - 0 ID=cds-WP_128205781.1;Parent=gene-NLI98_RS05935;Dbxref=Genbank:WP_128205781.1;Name=WP_128205781.1;Ontology_term=GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000124716.1;locus_tag=NLI98_RS05935;product=integrase domain-containing protein;protein_id=WP_128205781.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1203114 1203476 . - . ID=gene-NLI98_RS05940;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=NLI98_RS05940;old_locus_tag=NLI98_05935 NZ_CP100601.1 cmsearch tmRNA 1203114 1203476 . - . ID=rna-NLI98_RS05940;Parent=gene-NLI98_RS05940;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS05940;product=transfer-messenger RNA NZ_CP100601.1 cmsearch exon 1203114 1203476 . - . ID=exon-NLI98_RS05940-1;Parent=rna-NLI98_RS05940;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS05940;product=transfer-messenger RNA NZ_CP100601.1 RefSeq gene 1203621 1204103 . - . ID=gene-NLI98_RS05945;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=NLI98_RS05945;old_locus_tag=NLI98_05940 NZ_CP100601.1 Protein Homology CDS 1203621 1204103 . - 0 ID=cds-WP_002914164.1;Parent=gene-NLI98_RS05945;Dbxref=Genbank:WP_002914164.1;Name=WP_002914164.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228361.1;locus_tag=NLI98_RS05945;product=SsrA-binding protein SmpB;protein_id=WP_002914164.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1204253 1204690 . + . ID=gene-NLI98_RS05950;Name=NLI98_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05950;old_locus_tag=NLI98_05945 NZ_CP100601.1 Protein Homology CDS 1204253 1204690 . + 0 ID=cds-WP_004145683.1;Parent=gene-NLI98_RS05950;Dbxref=Genbank:WP_004145683.1;Name=WP_004145683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015963348.1;locus_tag=NLI98_RS05950;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_004145683.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1204680 1204970 . + . ID=gene-NLI98_RS05955;Name=NLI98_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05955;old_locus_tag=NLI98_05950 NZ_CP100601.1 Protein Homology CDS 1204680 1204970 . + 0 ID=cds-WP_004145682.1;Parent=gene-NLI98_RS05955;Dbxref=Genbank:WP_004145682.1;Name=WP_004145682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228359.1;locus_tag=NLI98_RS05955;product=RnfH family protein;protein_id=WP_004145682.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1205037 1205378 . - . ID=gene-NLI98_RS05960;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=NLI98_RS05960;old_locus_tag=NLI98_05955 NZ_CP100601.1 Protein Homology CDS 1205037 1205378 . - 0 ID=cds-WP_002914160.1;Parent=gene-NLI98_RS05960;Dbxref=Genbank:WP_002914160.1;Name=WP_002914160.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228358.1;locus_tag=NLI98_RS05960;product=outer membrane protein assembly factor BamE;protein_id=WP_002914160.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1205526 1207187 . - . ID=gene-NLI98_RS05965;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=NLI98_RS05965;old_locus_tag=NLI98_05960 NZ_CP100601.1 Protein Homology CDS 1205526 1207187 . - 0 ID=cds-WP_088498526.1;Parent=gene-NLI98_RS05965;Dbxref=Genbank:WP_088498526.1;Name=WP_088498526.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228356.1;locus_tag=NLI98_RS05965;product=DNA repair protein RecN;protein_id=WP_088498526.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1207274 1208152 . - . ID=gene-NLI98_RS05970;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=NLI98_RS05970;old_locus_tag=NLI98_05965 NZ_CP100601.1 Protein Homology CDS 1207274 1208152 . - 0 ID=cds-WP_002914158.1;Parent=gene-NLI98_RS05970;Dbxref=Genbank:WP_002914158.1;Name=WP_002914158.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239499.1;locus_tag=NLI98_RS05970;product=NAD(+) kinase;protein_id=WP_002914158.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1208276 1208866 . + . ID=gene-NLI98_RS05975;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=NLI98_RS05975;old_locus_tag=NLI98_05970 NZ_CP100601.1 Protein Homology CDS 1208276 1208866 . + 0 ID=cds-WP_004174800.1;Parent=gene-NLI98_RS05975;Dbxref=Genbank:WP_004174800.1;Name=WP_004174800.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228354.1;locus_tag=NLI98_RS05975;product=nucleotide exchange factor GrpE;protein_id=WP_004174800.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1208986 1210272 . - . ID=gene-NLI98_RS05980;Name=NLI98_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05980;old_locus_tag=NLI98_05975 NZ_CP100601.1 Protein Homology CDS 1208986 1210272 . - 0 ID=cds-WP_004149392.1;Parent=gene-NLI98_RS05980;Dbxref=Genbank:WP_004149392.1;Name=WP_004149392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026171.3;locus_tag=NLI98_RS05980;product=HlyC/CorC family transporter;protein_id=WP_004149392.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1210292 1211083 . - . ID=gene-NLI98_RS05985;Name=NLI98_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS05985;old_locus_tag=NLI98_05980 NZ_CP100601.1 Protein Homology CDS 1210292 1211083 . - 0 ID=cds-WP_002914153.1;Parent=gene-NLI98_RS05985;Dbxref=Genbank:WP_002914153.1;Name=WP_002914153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228349.1;locus_tag=NLI98_RS05985;product=inner membrane protein YpjD;protein_id=WP_002914153.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1211247 1212611 . + . ID=gene-NLI98_RS05990;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=NLI98_RS05990;old_locus_tag=NLI98_05985 NZ_CP100601.1 Protein Homology CDS 1211247 1212611 . + 0 ID=cds-WP_002914152.1;Parent=gene-NLI98_RS05990;Dbxref=Genbank:WP_002914152.1;Name=WP_002914152.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=NLI98_RS05990;product=signal recognition particle protein;protein_id=WP_002914152.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1212871 1213119 . + . ID=gene-NLI98_RS05995;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=NLI98_RS05995;old_locus_tag=NLI98_05990 NZ_CP100601.1 Protein Homology CDS 1212871 1213119 . + 0 ID=cds-WP_002914149.1;Parent=gene-NLI98_RS05995;Dbxref=Genbank:WP_002914149.1;Name=WP_002914149.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000256453.1;locus_tag=NLI98_RS05995;product=30S ribosomal protein S16;protein_id=WP_002914149.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1213138 1213686 . + . ID=gene-NLI98_RS06000;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=NLI98_RS06000;old_locus_tag=NLI98_05995 NZ_CP100601.1 Protein Homology CDS 1213138 1213686 . + 0 ID=cds-WP_004150977.1;Parent=gene-NLI98_RS06000;Dbxref=Genbank:WP_004150977.1;Name=WP_004150977.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=NLI98_RS06000;product=ribosome maturation factor RimM;protein_id=WP_004150977.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1213718 1214485 . + . ID=gene-NLI98_RS06005;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=NLI98_RS06005;old_locus_tag=NLI98_06000 NZ_CP100601.1 Protein Homology CDS 1213718 1214485 . + 0 ID=cds-WP_002914147.1;Parent=gene-NLI98_RS06005;Dbxref=Genbank:WP_002914147.1;Name=WP_002914147.1;Ontology_term=GO:0006400,GO:0009019;gbkey=CDS;gene=trmD;go_function=tRNA (guanine-N1-)-methyltransferase activity|0009019||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228345.1;locus_tag=NLI98_RS06005;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_002914147.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1214525 1214872 . + . ID=gene-NLI98_RS06010;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=NLI98_RS06010;old_locus_tag=NLI98_06005 NZ_CP100601.1 Protein Homology CDS 1214525 1214872 . + 0 ID=cds-WP_002914145.1;Parent=gene-NLI98_RS06010;Dbxref=Genbank:WP_002914145.1;Name=WP_002914145.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012768745.1;locus_tag=NLI98_RS06010;product=50S ribosomal protein L19;protein_id=WP_002914145.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1214992 1215450 . + . ID=gene-NLI98_RS06015;Name=NLI98_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06015;old_locus_tag=NLI98_06010 NZ_CP100601.1 Protein Homology CDS 1214992 1215450 . + 0 ID=cds-WP_032433448.1;Parent=gene-NLI98_RS06015;Dbxref=Genbank:WP_032433448.1;Name=WP_032433448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228298.1;locus_tag=NLI98_RS06015;product=DUF2946 domain-containing protein;protein_id=WP_032433448.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1215507 1216877 . + . ID=gene-NLI98_RS06020;Name=NLI98_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06020;old_locus_tag=NLI98_06015 NZ_CP100601.1 Protein Homology CDS 1215507 1216877 . + 0 ID=cds-WP_040250528.1;Parent=gene-NLI98_RS06020;Dbxref=Genbank:WP_040250528.1;Name=WP_040250528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228297.1;locus_tag=NLI98_RS06020;product=PepSY domain-containing protein;protein_id=WP_040250528.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1216886 1217368 . - . ID=gene-NLI98_RS06025;Name=NLI98_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06025;old_locus_tag=NLI98_06020 NZ_CP100601.1 Protein Homology CDS 1216886 1217368 . - 0 ID=cds-WP_004145671.1;Parent=gene-NLI98_RS06025;Dbxref=Genbank:WP_004145671.1;Name=WP_004145671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228296.1;locus_tag=NLI98_RS06025;product=OmpA family protein;protein_id=WP_004145671.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1217382 1218605 . - . ID=gene-NLI98_RS06030;Name=dgcN;gbkey=Gene;gene=dgcN;gene_biotype=protein_coding;locus_tag=NLI98_RS06030;old_locus_tag=NLI98_06025 NZ_CP100601.1 Protein Homology CDS 1217382 1218605 . - 0 ID=cds-WP_002914116.1;Parent=gene-NLI98_RS06030;Dbxref=Genbank:WP_002914116.1;Name=WP_002914116.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;gene=dgcN;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228295.1;locus_tag=NLI98_RS06030;product=diguanylate cyclase DgcN;protein_id=WP_002914116.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1218598 1219107 . - . ID=gene-NLI98_RS06035;Name=NLI98_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06035;old_locus_tag=NLI98_06030 NZ_CP100601.1 Protein Homology CDS 1218598 1219107 . - 0 ID=cds-WP_040165597.1;Parent=gene-NLI98_RS06035;Dbxref=Genbank:WP_040165597.1;Name=WP_040165597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228294.1;locus_tag=NLI98_RS06035;product=YfiR family protein;protein_id=WP_040165597.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1219450 1220520 . + . ID=gene-NLI98_RS06040;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=NLI98_RS06040;old_locus_tag=NLI98_06035 NZ_CP100601.1 Protein Homology CDS 1219450 1220520 . + 0 ID=cds-WP_002914114.1;Parent=gene-NLI98_RS06040;Dbxref=Genbank:WP_002914114.1;Name=WP_002914114.1;gbkey=CDS;gene=aroF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228293.1;locus_tag=NLI98_RS06040;product=3-deoxy-7-phosphoheptulonate synthase AroF;protein_id=WP_002914114.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1220530 1221651 . + . ID=gene-NLI98_RS06045;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=NLI98_RS06045;old_locus_tag=NLI98_06040 NZ_CP100601.1 Protein Homology CDS 1220530 1221651 . + 0 ID=cds-WP_002914113.1;Parent=gene-NLI98_RS06045;Dbxref=Genbank:WP_002914113.1;Name=WP_002914113.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228292.1;locus_tag=NLI98_RS06045;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_002914113.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1221714 1222586 . + . ID=gene-NLI98_RS06050;Name=NLI98_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06050;old_locus_tag=NLI98_06045 NZ_CP100601.1 Protein Homology CDS 1221714 1222586 . + 0 ID=cds-WP_004174805.1;Parent=gene-NLI98_RS06050;Dbxref=Genbank:WP_004174805.1;Name=WP_004174805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228291.1;locus_tag=NLI98_RS06050;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_004174805.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1222583 1223743 . - . ID=gene-NLI98_RS06055;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=NLI98_RS06055;old_locus_tag=NLI98_06050 NZ_CP100601.1 Protein Homology CDS 1222583 1223743 . - 0 ID=cds-WP_004150975.1;Parent=gene-NLI98_RS06055;Dbxref=Genbank:WP_004150975.1;Name=WP_004150975.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228290.1;locus_tag=NLI98_RS06055;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_004150975.1;transl_table=11 NZ_CP100601.1 cmsearch sequence_feature 1223768 1223892 . - . ID=id-NZ_CP100601.1:1223768..1223892;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP100601.1 RefSeq gene 1223844 1223891 . - . ID=gene-NLI98_RS06060;Name=pheL;gbkey=Gene;gene=pheL;gene_biotype=protein_coding;locus_tag=NLI98_RS06060;old_locus_tag=NLI98_06055 NZ_CP100601.1 Protein Homology CDS 1223844 1223891 . - 0 ID=cds-WP_100250063.1;Parent=gene-NLI98_RS06060;Dbxref=Genbank:WP_100250063.1;Name=WP_100250063.1;gbkey=CDS;gene=pheL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311488.1;locus_tag=NLI98_RS06060;product=pheA operon leader peptide PheL;protein_id=WP_100250063.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1223998 1224333 . - . ID=gene-NLI98_RS06065;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=NLI98_RS06065;old_locus_tag=NLI98_06060 NZ_CP100601.1 Protein Homology CDS 1223998 1224333 . - 0 ID=cds-WP_002914111.1;Parent=gene-NLI98_RS06065;Dbxref=Genbank:WP_002914111.1;Name=WP_002914111.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228289.1;locus_tag=NLI98_RS06065;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_002914111.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1224604 1225341 . - . ID=gene-NLI98_RS06070;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=NLI98_RS06070;old_locus_tag=NLI98_06065 NZ_CP100601.1 Protein Homology CDS 1224604 1225341 . - 0 ID=cds-WP_004145664.1;Parent=gene-NLI98_RS06070;Dbxref=Genbank:WP_004145664.1;Name=WP_004145664.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228288.1;locus_tag=NLI98_RS06070;product=outer membrane protein assembly factor BamD;protein_id=WP_004145664.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1225473 1226453 . + . ID=gene-NLI98_RS06075;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=NLI98_RS06075;old_locus_tag=NLI98_06070 NZ_CP100601.1 Protein Homology CDS 1225473 1226453 . + 0 ID=cds-WP_002914110.1;Parent=gene-NLI98_RS06075;Dbxref=Genbank:WP_002914110.1;Name=WP_002914110.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017383977.1;locus_tag=NLI98_RS06075;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_002914110.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1226450 1227181 . + . ID=gene-NLI98_RS06080;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=NLI98_RS06080;old_locus_tag=NLI98_06075 NZ_CP100601.1 Protein Homology CDS 1226450 1227181 . + 0 ID=cds-WP_040241539.1;Parent=gene-NLI98_RS06080;Dbxref=Genbank:WP_040241539.1;Name=WP_040241539.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461592.1;locus_tag=NLI98_RS06080;product=purine nucleoside phosphorylase YfiH;protein_id=WP_040241539.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1227311 1229884 . + . ID=gene-NLI98_RS06085;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=NLI98_RS06085;old_locus_tag=NLI98_06080 NZ_CP100601.1 Protein Homology CDS 1227311 1229884 . + 0 ID=cds-WP_004890358.1;Parent=gene-NLI98_RS06085;Dbxref=Genbank:WP_004890358.1;Name=WP_004890358.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=NLI98_RS06085;product=ATP-dependent chaperone ClpB;protein_id=WP_004890358.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1230350 1231889 . + . ID=gene-NLI98_RS06090;Name=NLI98_RS06090;gbkey=Gene;gene_biotype=rRNA;locus_tag=NLI98_RS06090;old_locus_tag=NLI98_06085 NZ_CP100601.1 cmsearch rRNA 1230350 1231889 . + . ID=rna-NLI98_RS06090;Parent=gene-NLI98_RS06090;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS06090;product=16S ribosomal RNA NZ_CP100601.1 cmsearch exon 1230350 1231889 . + . ID=exon-NLI98_RS06090-1;Parent=rna-NLI98_RS06090;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS06090;product=16S ribosomal RNA NZ_CP100601.1 RefSeq gene 1231975 1232050 . + . ID=gene-NLI98_RS06095;Name=NLI98_RS06095;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS06095;old_locus_tag=NLI98_06090 NZ_CP100601.1 tRNAscan-SE tRNA 1231975 1232050 . + . ID=rna-NLI98_RS06095;Parent=gene-NLI98_RS06095;anticodon=(pos:1232009..1232011);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS06095;product=tRNA-Glu NZ_CP100601.1 tRNAscan-SE exon 1231975 1232050 . + . ID=exon-NLI98_RS06095-1;Parent=rna-NLI98_RS06095;anticodon=(pos:1232009..1232011);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS06095;product=tRNA-Glu NZ_CP100601.1 RefSeq gene 1232233 1235134 . + . ID=gene-NLI98_RS06100;Name=NLI98_RS06100;gbkey=Gene;gene_biotype=rRNA;locus_tag=NLI98_RS06100;old_locus_tag=NLI98_06095 NZ_CP100601.1 cmsearch rRNA 1232233 1235134 . + . ID=rna-NLI98_RS06100;Parent=gene-NLI98_RS06100;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS06100;product=23S ribosomal RNA NZ_CP100601.1 cmsearch exon 1232233 1235134 . + . ID=exon-NLI98_RS06100-1;Parent=rna-NLI98_RS06100;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS06100;product=23S ribosomal RNA NZ_CP100601.1 RefSeq gene 1235330 1235445 . + . ID=gene-NLI98_RS06105;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NLI98_RS06105;old_locus_tag=NLI98_06100 NZ_CP100601.1 cmsearch rRNA 1235330 1235445 . + . ID=rna-NLI98_RS06105;Parent=gene-NLI98_RS06105;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS06105;product=5S ribosomal RNA NZ_CP100601.1 cmsearch exon 1235330 1235445 . + . ID=exon-NLI98_RS06105-1;Parent=rna-NLI98_RS06105;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS06105;product=5S ribosomal RNA NZ_CP100601.1 RefSeq gene 1235888 1237186 . + . ID=gene-NLI98_RS06110;Name=NLI98_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06110;old_locus_tag=NLI98_06105 NZ_CP100601.1 Protein Homology CDS 1235888 1237186 . + 0 ID=cds-WP_088498313.1;Parent=gene-NLI98_RS06110;Dbxref=Genbank:WP_088498313.1;Name=WP_088498313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228282.1;locus_tag=NLI98_RS06110;product=MFS transporter;protein_id=WP_088498313.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1237190 1237513 . - . ID=gene-NLI98_RS06115;Name=NLI98_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06115;old_locus_tag=NLI98_06110 NZ_CP100601.1 Protein Homology CDS 1237190 1237513 . - 0 ID=cds-WP_004888435.1;Parent=gene-NLI98_RS06115;Dbxref=Genbank:WP_004888435.1;Name=WP_004888435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228281.1;locus_tag=NLI98_RS06115;product=YfiM family lipoprotein;protein_id=WP_004888435.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1237555 1238910 . - . ID=gene-NLI98_RS06120;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=NLI98_RS06120;old_locus_tag=NLI98_06115 NZ_CP100601.1 Protein Homology CDS 1237555 1238910 . - 0 ID=cds-WP_004180947.1;Parent=gene-NLI98_RS06120;Dbxref=Genbank:WP_004180947.1;Name=WP_004180947.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121216.1;locus_tag=NLI98_RS06120;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_004180947.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1239031 1241682 . - . ID=gene-NLI98_RS06125;Name=pat;gbkey=Gene;gene=pat;gene_biotype=protein_coding;locus_tag=NLI98_RS06125;old_locus_tag=NLI98_06120 NZ_CP100601.1 Protein Homology CDS 1239031 1241682 . - 0 ID=cds-WP_004149373.1;Parent=gene-NLI98_RS06125;Dbxref=Genbank:WP_004149373.1;Name=WP_004149373.1;gbkey=CDS;gene=pat;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228279.1;locus_tag=NLI98_RS06125;product=protein lysine acetyltransferase;protein_id=WP_004149373.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1241717 1242415 . - . ID=gene-NLI98_RS06130;Name=tapT;gbkey=Gene;gene=tapT;gene_biotype=protein_coding;gene_synonym=tuaA,yfiP;locus_tag=NLI98_RS06130;old_locus_tag=NLI98_06125 NZ_CP100601.1 Protein Homology CDS 1241717 1242415 . - 0 ID=cds-WP_023285464.1;Parent=gene-NLI98_RS06130;Dbxref=Genbank:WP_023285464.1;Name=WP_023285464.1;gbkey=CDS;gene=tapT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228278.1;locus_tag=NLI98_RS06130;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_023285464.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1242485 1242910 . - . ID=gene-NLI98_RS06135;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=NLI98_RS06135;old_locus_tag=NLI98_06130 NZ_CP100601.1 Protein Homology CDS 1242485 1242910 . - 0 ID=cds-WP_088498314.1;Parent=gene-NLI98_RS06135;Dbxref=Genbank:WP_088498314.1;Name=WP_088498314.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxC;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228277.1;locus_tag=NLI98_RS06135;product=thioredoxin TrxC;protein_id=WP_088498314.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1243114 1244199 . + . ID=gene-NLI98_RS06140;Name=NLI98_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06140;old_locus_tag=NLI98_06135 NZ_CP100601.1 Protein Homology CDS 1243114 1244199 . + 0 ID=cds-WP_004174810.1;Parent=gene-NLI98_RS06140;Dbxref=Genbank:WP_004174810.1;Name=WP_004174810.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228276.1;locus_tag=NLI98_RS06140;product=tRNA/rRNA methyltransferase;protein_id=WP_004174810.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1244258 1244947 . - . ID=gene-NLI98_RS06145;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=NLI98_RS06145;old_locus_tag=NLI98_06140 NZ_CP100601.1 Protein Homology CDS 1244258 1244947 . - 0 ID=cds-WP_002914088.1;Parent=gene-NLI98_RS06145;Dbxref=Genbank:WP_002914088.1;Name=WP_002914088.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228275.1;locus_tag=NLI98_RS06145;product=uracil-DNA glycosylase;protein_id=WP_002914088.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1245260 1245643 . + . ID=gene-NLI98_RS06150;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=NLI98_RS06150;old_locus_tag=NLI98_06145 NZ_CP100601.1 Protein Homology CDS 1245260 1245643 . + 0 ID=cds-WP_002914084.1;Parent=gene-NLI98_RS06150;Dbxref=Genbank:WP_002914084.1;Name=WP_002914084.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=NLI98_RS06150;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_002914084.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1245689 1247020 . - . ID=gene-NLI98_RS06155;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=NLI98_RS06155;old_locus_tag=NLI98_06150 NZ_CP100601.1 Protein Homology CDS 1245689 1247020 . - 0 ID=cds-WP_088498315.1;Parent=gene-NLI98_RS06155;Dbxref=Genbank:WP_088498315.1;Name=WP_088498315.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228273.1;locus_tag=NLI98_RS06155;product=ATP-dependent RNA helicase SrmB;protein_id=WP_088498315.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1247152 1247889 . + . ID=gene-NLI98_RS06160;Name=NLI98_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06160;old_locus_tag=NLI98_06155 NZ_CP100601.1 Protein Homology CDS 1247152 1247889 . + 0 ID=cds-WP_002914079.1;Parent=gene-NLI98_RS06160;Dbxref=Genbank:WP_002914079.1;Name=WP_002914079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228272.1;locus_tag=NLI98_RS06160;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_002914079.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1247874 1249493 . - . ID=gene-NLI98_RS06165;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=NLI98_RS06165;old_locus_tag=NLI98_06160 NZ_CP100601.1 Protein Homology CDS 1247874 1249493 . - 0 ID=cds-WP_088498316.1;Parent=gene-NLI98_RS06165;Dbxref=Genbank:WP_088498316.1;Name=WP_088498316.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228271.1;locus_tag=NLI98_RS06165;product=L-aspartate oxidase;protein_id=WP_088498316.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1249914 1250489 . + . ID=gene-NLI98_RS06170;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=NLI98_RS06170;old_locus_tag=NLI98_06165 NZ_CP100601.1 Protein Homology CDS 1249914 1250489 . + 0 ID=cds-WP_002914074.1;Parent=gene-NLI98_RS06170;Dbxref=Genbank:WP_002914074.1;Name=WP_002914074.1;Ontology_term=GO:0006352,GO:0006979,GO:0016987,GO:0005737;gbkey=CDS;gene=rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1;locus_tag=NLI98_RS06170;product=RNA polymerase sigma factor RpoE;protein_id=WP_002914074.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1250522 1251172 . + . ID=gene-NLI98_RS06175;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=NLI98_RS06175;old_locus_tag=NLI98_06170 NZ_CP100601.1 Protein Homology CDS 1250522 1251172 . + 0 ID=cds-WP_002914072.1;Parent=gene-NLI98_RS06175;Dbxref=Genbank:WP_002914072.1;Name=WP_002914072.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228269.1;locus_tag=NLI98_RS06175;product=anti-sigma-E factor RseA;protein_id=WP_002914072.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1251172 1252128 . + . ID=gene-NLI98_RS06180;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=NLI98_RS06180;old_locus_tag=NLI98_06175 NZ_CP100601.1 Protein Homology CDS 1251172 1252128 . + 0 ID=cds-WP_002914070.1;Parent=gene-NLI98_RS06180;Dbxref=Genbank:WP_002914070.1;Name=WP_002914070.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144355.1;locus_tag=NLI98_RS06180;product=sigma-E factor regulatory protein RseB;protein_id=WP_002914070.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1252125 1252604 . + . ID=gene-NLI98_RS06185;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=NLI98_RS06185;old_locus_tag=NLI98_06180 NZ_CP100601.1 Protein Homology CDS 1252125 1252604 . + 0 ID=cds-WP_004144354.1;Parent=gene-NLI98_RS06185;Dbxref=Genbank:WP_004144354.1;Name=WP_004144354.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228267.1;locus_tag=NLI98_RS06185;product=SoxR-reducing system protein RseC;protein_id=WP_004144354.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1252790 1254589 . + . ID=gene-NLI98_RS06190;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=NLI98_RS06190;old_locus_tag=NLI98_06185 NZ_CP100601.1 Protein Homology CDS 1252790 1254589 . + 0 ID=cds-WP_088498317.1;Parent=gene-NLI98_RS06190;Dbxref=Genbank:WP_088498317.1;Name=WP_088498317.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228266.1;locus_tag=NLI98_RS06190;product=translation elongation factor 4;protein_id=WP_088498317.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1254605 1255579 . + . ID=gene-NLI98_RS06195;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=NLI98_RS06195;old_locus_tag=NLI98_06190 NZ_CP100601.1 Protein Homology CDS 1254605 1255579 . + 0 ID=cds-WP_002914067.1;Parent=gene-NLI98_RS06195;Dbxref=Genbank:WP_002914067.1;Name=WP_002914067.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228265.1;locus_tag=NLI98_RS06195;product=signal peptidase I;protein_id=WP_002914067.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1255829 1256509 . + . ID=gene-NLI98_RS06200;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=NLI98_RS06200;old_locus_tag=NLI98_06195 NZ_CP100601.1 Protein Homology CDS 1255829 1256509 . + 0 ID=cds-WP_002914065.1;Parent=gene-NLI98_RS06200;Dbxref=Genbank:WP_002914065.1;Name=WP_002914065.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=NLI98_RS06200;product=ribonuclease III;protein_id=WP_002914065.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1256506 1257411 . + . ID=gene-NLI98_RS06205;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=NLI98_RS06205;old_locus_tag=NLI98_06200 NZ_CP100601.1 Protein Homology CDS 1256506 1257411 . + 0 ID=cds-WP_002914063.1;Parent=gene-NLI98_RS06205;Dbxref=Genbank:WP_002914063.1;Name=WP_002914063.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0019843,GO:0043022;gbkey=CDS;gene=era;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,rRNA binding|0019843||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228262.1;locus_tag=NLI98_RS06205;product=GTPase Era;protein_id=WP_002914063.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1257423 1258160 . + . ID=gene-NLI98_RS06210;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=NLI98_RS06210;old_locus_tag=NLI98_06205 NZ_CP100601.1 Protein Homology CDS 1257423 1258160 . + 0 ID=cds-WP_002914062.1;Parent=gene-NLI98_RS06210;Dbxref=Genbank:WP_002914062.1;Name=WP_002914062.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228261.1;locus_tag=NLI98_RS06210;product=DNA repair protein RecO;protein_id=WP_002914062.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1258172 1258903 . + . ID=gene-NLI98_RS06215;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=NLI98_RS06215;old_locus_tag=NLI98_06210 NZ_CP100601.1 Protein Homology CDS 1258172 1258903 . + 0 ID=cds-WP_004180923.1;Parent=gene-NLI98_RS06215;Dbxref=Genbank:WP_004180923.1;Name=WP_004180923.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228260.1;locus_tag=NLI98_RS06215;product=pyridoxine 5'-phosphate synthase;protein_id=WP_004180923.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1258903 1259283 . + . ID=gene-NLI98_RS06220;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=NLI98_RS06220;old_locus_tag=NLI98_06215 NZ_CP100601.1 Protein Homology CDS 1258903 1259283 . + 0 ID=cds-WP_004144351.1;Parent=gene-NLI98_RS06220;Dbxref=Genbank:WP_004144351.1;Name=WP_004144351.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228259.1;locus_tag=NLI98_RS06220;product=holo-ACP synthase;protein_id=WP_004144351.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1259296 1259556 . - . ID=gene-NLI98_RS06225;Name=NLI98_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06225;old_locus_tag=NLI98_06220 NZ_CP100601.1 Protein Homology CDS 1259296 1259556 . - 0 ID=cds-WP_088498318.1;Parent=gene-NLI98_RS06225;Dbxref=Genbank:WP_088498318.1;Name=WP_088498318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228258.1;locus_tag=NLI98_RS06225;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_088498318.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1259613 1260461 . - . ID=gene-NLI98_RS06230;Name=NLI98_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06230;old_locus_tag=NLI98_06225 NZ_CP100601.1 Protein Homology CDS 1259613 1260461 . - 0 ID=cds-WP_004144349.1;Parent=gene-NLI98_RS06230;Dbxref=Genbank:WP_004144349.1;Name=WP_004144349.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228257.1;locus_tag=NLI98_RS06230;product=MurR/RpiR family transcriptional regulator;protein_id=WP_004144349.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1260675 1261310 . + . ID=gene-NLI98_RS06235;Name=yfhb;gbkey=Gene;gene=yfhb;gene_biotype=protein_coding;locus_tag=NLI98_RS06235;old_locus_tag=NLI98_06230 NZ_CP100601.1 Protein Homology CDS 1260675 1261310 . + 0 ID=cds-WP_004180922.1;Parent=gene-NLI98_RS06235;Dbxref=Genbank:WP_004180922.1;Name=WP_004180922.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yfhb;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008803773.1;locus_tag=NLI98_RS06235;product=phosphatidylglycerophosphatase C;protein_id=WP_004180922.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1261373 1261882 . + . ID=gene-NLI98_RS06240;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=NLI98_RS06240;old_locus_tag=NLI98_06235 NZ_CP100601.1 Protein Homology CDS 1261373 1261882 . + 0 ID=cds-WP_004151991.1;Parent=gene-NLI98_RS06240;Dbxref=Genbank:WP_004151991.1;Name=WP_004151991.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228255.1;locus_tag=NLI98_RS06240;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_004151991.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1261879 1263495 . - . ID=gene-NLI98_RS06245;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=NLI98_RS06245;old_locus_tag=NLI98_06240 NZ_CP100601.1 Protein Homology CDS 1261879 1263495 . - 0 ID=cds-WP_002914046.1;Parent=gene-NLI98_RS06245;Dbxref=Genbank:WP_002914046.1;Name=WP_002914046.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228254.1;locus_tag=NLI98_RS06245;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_002914046.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1263671 1267558 . + . ID=gene-NLI98_RS06250;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=NLI98_RS06250;old_locus_tag=NLI98_06245 NZ_CP100601.1 Protein Homology CDS 1263671 1267558 . + 0 ID=cds-WP_088498319.1;Parent=gene-NLI98_RS06250;Dbxref=Genbank:WP_088498319.1;Name=WP_088498319.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228253.1;locus_tag=NLI98_RS06250;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_088498319.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1268148 1269569 . + . ID=gene-NLI98_RS06255;Name=NLI98_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06255;old_locus_tag=NLI98_06250 NZ_CP100601.1 Protein Homology CDS 1268148 1269569 . + 0 ID=cds-WP_012967434.1;Parent=gene-NLI98_RS06255;Dbxref=Genbank:WP_012967434.1;Name=WP_012967434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228252.1;locus_tag=NLI98_RS06255;product=HAMP domain-containing histidine kinase;protein_id=WP_012967434.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1269599 1270285 . + . ID=gene-NLI98_RS06260;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=NLI98_RS06260;old_locus_tag=NLI98_06255 NZ_CP100601.1 Protein Homology CDS 1269599 1270285 . + 0 ID=cds-WP_002914033.1;Parent=gene-NLI98_RS06260;Dbxref=Genbank:WP_002914033.1;Name=WP_002914033.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228251.1;locus_tag=NLI98_RS06260;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_002914033.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1270272 1271609 . + . ID=gene-NLI98_RS06265;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=NLI98_RS06265;old_locus_tag=NLI98_06260 NZ_CP100601.1 Protein Homology CDS 1270272 1271609 . + 0 ID=cds-WP_004144342.1;Parent=gene-NLI98_RS06265;Dbxref=Genbank:WP_004144342.1;Name=WP_004144342.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228250.1;locus_tag=NLI98_RS06265;product=two-component system response regulator GlrR;protein_id=WP_004144342.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1271675 1272013 . + . ID=gene-NLI98_RS06270;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=NLI98_RS06270;old_locus_tag=NLI98_06265 NZ_CP100601.1 Protein Homology CDS 1271675 1272013 . + 0 ID=cds-WP_002914032.1;Parent=gene-NLI98_RS06270;Dbxref=Genbank:WP_002914032.1;Name=WP_002914032.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=NLI98_RS06270;product=nitrogen regulatory protein P-II;protein_id=WP_002914032.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1272087 1273277 . - . ID=gene-NLI98_RS06275;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=NLI98_RS06275;old_locus_tag=NLI98_06270 NZ_CP100601.1 Protein Homology CDS 1272087 1273277 . - 0 ID=cds-WP_032444730.1;Parent=gene-NLI98_RS06275;Dbxref=Genbank:WP_032444730.1;Name=WP_032444730.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228248.1;locus_tag=NLI98_RS06275;product=NO-inducible flavohemoprotein;protein_id=WP_032444730.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1273603 1274856 . + . ID=gene-NLI98_RS06280;Name=NLI98_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06280;old_locus_tag=NLI98_06275 NZ_CP100601.1 Protein Homology CDS 1273603 1274856 . + 0 ID=cds-WP_002914027.1;Parent=gene-NLI98_RS06280;Dbxref=Genbank:WP_002914027.1;Name=WP_002914027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=NLI98_RS06280;product=serine hydroxymethyltransferase;protein_id=WP_002914027.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1274912 1275334 . - . ID=gene-NLI98_RS06285;Name=NLI98_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06285;old_locus_tag=NLI98_06280 NZ_CP100601.1 Protein Homology CDS 1274912 1275334 . - 0 ID=cds-WP_088498325.1;Parent=gene-NLI98_RS06285;Dbxref=Genbank:WP_088498325.1;Name=WP_088498325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228246.1;locus_tag=NLI98_RS06285;product=DoxX family protein;protein_id=WP_088498325.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1275408 1276604 . - . ID=gene-NLI98_RS06290;Name=NLI98_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06290;old_locus_tag=NLI98_06285 NZ_CP100601.1 Protein Homology CDS 1275408 1276604 . - 0 ID=cds-WP_088498321.1;Parent=gene-NLI98_RS06290;Dbxref=Genbank:WP_088498321.1;Name=WP_088498321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228245.1;locus_tag=NLI98_RS06290;product=ROK family transcriptional regulator;protein_id=WP_088498321.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1276717 1279992 . + . ID=gene-NLI98_RS06295;Name=NLI98_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06295;old_locus_tag=NLI98_06290 NZ_CP100601.1 Protein Homology CDS 1276717 1279992 . + 0 ID=cds-WP_088498322.1;Parent=gene-NLI98_RS06295;Dbxref=Genbank:WP_088498322.1;Name=WP_088498322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228244.1;locus_tag=NLI98_RS06295;product=DUF5107 domain-containing protein;protein_id=WP_088498322.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1280062 1281498 . + . ID=gene-NLI98_RS06300;Name=NLI98_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06300;old_locus_tag=NLI98_06295 NZ_CP100601.1 Protein Homology CDS 1280062 1281498 . + 0 ID=cds-WP_002914018.1;Parent=gene-NLI98_RS06300;Dbxref=Genbank:WP_002914018.1;Name=WP_002914018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228243.1;locus_tag=NLI98_RS06300;product=sugar porter family MFS transporter;protein_id=WP_002914018.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1281498 1282331 . + . ID=gene-NLI98_RS06305;Name=NLI98_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06305;old_locus_tag=NLI98_06300 NZ_CP100601.1 Protein Homology CDS 1281498 1282331 . + 0 ID=cds-WP_087760957.1;Parent=gene-NLI98_RS06305;Dbxref=Genbank:WP_087760957.1;Name=WP_087760957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228242.1;locus_tag=NLI98_RS06305;product=aldose 1-epimerase;protein_id=WP_087760957.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1282414 1283550 . + . ID=gene-NLI98_RS06310;Name=NLI98_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06310;old_locus_tag=NLI98_06305 NZ_CP100601.1 Protein Homology CDS 1282414 1283550 . + 0 ID=cds-WP_040189049.1;Parent=gene-NLI98_RS06310;Dbxref=Genbank:WP_040189049.1;Name=WP_040189049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004149349.1;locus_tag=NLI98_RS06310;product=3-phenylpropionate MFS transporter;protein_id=WP_040189049.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1283547 1284824 . - . ID=gene-NLI98_RS06315;Name=csiE;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=NLI98_RS06315;old_locus_tag=NLI98_06310 NZ_CP100601.1 Protein Homology CDS 1283547 1284824 . - 0 ID=cds-WP_002914002.1;Parent=gene-NLI98_RS06315;Dbxref=Genbank:WP_002914002.1;Name=WP_002914002.1;gbkey=CDS;gene=csiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228240.1;locus_tag=NLI98_RS06315;product=stationary phase inducible protein CsiE;protein_id=WP_002914002.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1284949 1285587 . + . ID=gene-NLI98_RS06320;Name=NLI98_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06320;old_locus_tag=NLI98_06315 NZ_CP100601.1 Protein Homology CDS 1284949 1285587 . + 0 ID=cds-WP_088498323.1;Parent=gene-NLI98_RS06320;Dbxref=Genbank:WP_088498323.1;Name=WP_088498323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019725302.1;locus_tag=NLI98_RS06320;product=DUF1007 family protein;protein_id=WP_088498323.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1285578 1286558 . + . ID=gene-NLI98_RS06325;Name=NLI98_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06325;old_locus_tag=NLI98_06320 NZ_CP100601.1 Protein Homology CDS 1285578 1286558 . + 0 ID=cds-WP_088498324.1;Parent=gene-NLI98_RS06325;Dbxref=Genbank:WP_088498324.1;Name=WP_088498324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228238.1;locus_tag=NLI98_RS06325;product=nickel/cobalt transporter;protein_id=WP_088498324.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1286658 1287494 . + . ID=gene-NLI98_RS06330;Name=NLI98_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06330;old_locus_tag=NLI98_06325 NZ_CP100601.1 Protein Homology CDS 1286658 1287494 . + 0 ID=cds-WP_004174831.1;Parent=gene-NLI98_RS06330;Dbxref=Genbank:WP_004174831.1;Name=WP_004174831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228237.1;locus_tag=NLI98_RS06330;product=hypothetical protein;protein_id=WP_004174831.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1287541 1288344 . - . ID=gene-NLI98_RS06335;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=NLI98_RS06335;old_locus_tag=NLI98_06330 NZ_CP100601.1 Protein Homology CDS 1287541 1288344 . - 0 ID=cds-WP_002913995.1;Parent=gene-NLI98_RS06335;Dbxref=Genbank:WP_002913995.1;Name=WP_002913995.1;Ontology_term=GO:0046854,GO:0046855,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA,inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=NLI98_RS06335;product=inositol-1-monophosphatase;protein_id=WP_002913995.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1288465 1289199 . + . ID=gene-NLI98_RS06340;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=NLI98_RS06340;old_locus_tag=NLI98_06335 NZ_CP100601.1 Protein Homology CDS 1288465 1289199 . + 0 ID=cds-WP_002913994.1;Parent=gene-NLI98_RS06340;Dbxref=Genbank:WP_002913994.1;Name=WP_002913994.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228235.1;locus_tag=NLI98_RS06340;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_002913994.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1289434 1289925 . + . ID=gene-NLI98_RS06345;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=NLI98_RS06345;old_locus_tag=NLI98_06340 NZ_CP100601.1 Protein Homology CDS 1289434 1289925 . + 0 ID=cds-WP_002913993.1;Parent=gene-NLI98_RS06345;Dbxref=Genbank:WP_002913993.1;Name=WP_002913993.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913993.1;locus_tag=NLI98_RS06345;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_002913993.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1290104 1291318 . + . ID=gene-NLI98_RS06350;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;locus_tag=NLI98_RS06350;old_locus_tag=NLI98_06345 NZ_CP100601.1 Protein Homology CDS 1290104 1291318 . + 0 ID=cds-WP_002913992.1;Parent=gene-NLI98_RS06350;Dbxref=Genbank:WP_002913992.1;Name=WP_002913992.1;gbkey=CDS;gene=iscS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=NLI98_RS06350;product=cysteine desulfurase;protein_id=WP_002913992.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1291345 1291731 . + . ID=gene-NLI98_RS06355;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=NLI98_RS06355;old_locus_tag=NLI98_06350 NZ_CP100601.1 Protein Homology CDS 1291345 1291731 . + 0 ID=cds-WP_002913991.1;Parent=gene-NLI98_RS06355;Dbxref=Genbank:WP_002913991.1;Name=WP_002913991.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=NLI98_RS06355;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_002913991.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1291749 1292072 . + . ID=gene-NLI98_RS06360;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=NLI98_RS06360;old_locus_tag=NLI98_06355 NZ_CP100601.1 Protein Homology CDS 1291749 1292072 . + 0 ID=cds-WP_002913979.1;Parent=gene-NLI98_RS06360;Dbxref=Genbank:WP_002913979.1;Name=WP_002913979.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228231.1;locus_tag=NLI98_RS06360;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_002913979.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1292147 1292662 . + . ID=gene-NLI98_RS06365;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=NLI98_RS06365;old_locus_tag=NLI98_06360 NZ_CP100601.1 Protein Homology CDS 1292147 1292662 . + 0 ID=cds-WP_004174835.1;Parent=gene-NLI98_RS06365;Dbxref=Genbank:WP_004174835.1;Name=WP_004174835.1;Ontology_term=GO:0097428,GO:0051087;gbkey=CDS;gene=hscB;go_function=chaperone binding|0051087||IEA;go_process=protein maturation by iron-sulfur cluster transfer|0097428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228230.1;locus_tag=NLI98_RS06365;product=co-chaperone HscB;protein_id=WP_004174835.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1292678 1294528 . + . ID=gene-NLI98_RS06370;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=NLI98_RS06370;old_locus_tag=NLI98_06365 NZ_CP100601.1 Protein Homology CDS 1292678 1294528 . + 0 ID=cds-WP_004149343.1;Parent=gene-NLI98_RS06370;Dbxref=Genbank:WP_004149343.1;Name=WP_004149343.1;Ontology_term=GO:0006457,GO:0005515;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001559634.1;locus_tag=NLI98_RS06370;product=Fe-S protein assembly chaperone HscA;protein_id=WP_004149343.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1294530 1294865 . + . ID=gene-NLI98_RS06375;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=NLI98_RS06375;old_locus_tag=NLI98_06370 NZ_CP100601.1 Protein Homology CDS 1294530 1294865 . + 0 ID=cds-WP_002913956.1;Parent=gene-NLI98_RS06375;Dbxref=Genbank:WP_002913956.1;Name=WP_002913956.1;Ontology_term=GO:0016226;gbkey=CDS;gene=fdx;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=NLI98_RS06375;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_002913956.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1294867 1295067 . + . ID=gene-NLI98_RS06380;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=NLI98_RS06380;old_locus_tag=NLI98_06375 NZ_CP100601.1 Protein Homology CDS 1294867 1295067 . + 0 ID=cds-WP_002913954.1;Parent=gene-NLI98_RS06380;Dbxref=Genbank:WP_002913954.1;Name=WP_002913954.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104502.1;locus_tag=NLI98_RS06380;product=Fe-S cluster assembly protein IscX;protein_id=WP_002913954.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1295138 1296424 . + . ID=gene-NLI98_RS06385;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=NLI98_RS06385;old_locus_tag=NLI98_06380 NZ_CP100601.1 Protein Homology CDS 1295138 1296424 . + 0 ID=cds-WP_004214205.1;Parent=gene-NLI98_RS06385;Dbxref=Genbank:WP_004214205.1;Name=WP_004214205.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228226.1;locus_tag=NLI98_RS06385;product=aminopeptidase PepB;protein_id=WP_004214205.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1296524 1297300 . + . ID=gene-NLI98_RS06390;Name=sseB;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=NLI98_RS06390;old_locus_tag=NLI98_06385 NZ_CP100601.1 Protein Homology CDS 1296524 1297300 . + 0 ID=cds-WP_002913952.1;Parent=gene-NLI98_RS06390;Dbxref=Genbank:WP_002913952.1;Name=WP_002913952.1;gbkey=CDS;gene=sseB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228225.1;locus_tag=NLI98_RS06390;product=enhanced serine sensitivity protein SseB;protein_id=WP_002913952.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1297371 1298213 . - . ID=gene-NLI98_RS06395;Name=NLI98_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06395;old_locus_tag=NLI98_06390 NZ_CP100601.1 Protein Homology CDS 1297371 1298213 . - 0 ID=cds-WP_065810225.1;Parent=gene-NLI98_RS06395;Dbxref=Genbank:WP_065810225.1;Name=WP_065810225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228224.1;locus_tag=NLI98_RS06395;product=hypothetical protein;protein_id=WP_065810225.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1298440 1299297 . - . ID=gene-NLI98_RS06400;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=NLI98_RS06400;old_locus_tag=NLI98_06395 NZ_CP100601.1 Protein Homology CDS 1298440 1299297 . - 0 ID=cds-WP_002913950.1;Parent=gene-NLI98_RS06400;Dbxref=Genbank:WP_002913950.1;Name=WP_002913950.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228223.1;locus_tag=NLI98_RS06400;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_002913950.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1299503 1304452 . + . ID=gene-NLI98_RS06405;Name=NLI98_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06405;old_locus_tag=NLI98_06400 NZ_CP100601.1 Protein Homology CDS 1299503 1304452 . + 0 ID=cds-WP_094645133.1;Parent=gene-NLI98_RS06405;Dbxref=Genbank:WP_094645133.1;Name=WP_094645133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228222.1;locus_tag=NLI98_RS06405;product=alpha-2-macroglobulin family protein;protein_id=WP_094645133.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1304453 1306777 . + . ID=gene-NLI98_RS06410;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=NLI98_RS06410;old_locus_tag=NLI98_06405 NZ_CP100601.1 Protein Homology CDS 1304453 1306777 . + 0 ID=cds-WP_088498326.1;Parent=gene-NLI98_RS06410;Dbxref=Genbank:WP_088498326.1;Name=WP_088498326.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228221.1;locus_tag=NLI98_RS06410;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_088498326.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1306938 1307369 . + . ID=gene-NLI98_RS06415;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=NLI98_RS06415;old_locus_tag=NLI98_06410 NZ_CP100601.1 Protein Homology CDS 1306938 1307369 . + 0 ID=cds-WP_004144312.1;Parent=gene-NLI98_RS06415;Dbxref=Genbank:WP_004144312.1;Name=WP_004144312.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000963848.1;locus_tag=NLI98_RS06415;product=nucleoside-diphosphate kinase;protein_id=WP_004144312.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1307853 1309019 . + . ID=gene-NLI98_RS06420;Name=NLI98_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06420;old_locus_tag=NLI98_06415 NZ_CP100601.1 Protein Homology CDS 1307853 1309019 . + 0 ID=cds-WP_002913894.1;Parent=gene-NLI98_RS06420;Dbxref=Genbank:WP_002913894.1;Name=WP_002913894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228219.1;locus_tag=NLI98_RS06420;product=bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN;protein_id=WP_002913894.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1309296 1310291 . + . ID=gene-NLI98_RS06425;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=NLI98_RS06425;old_locus_tag=NLI98_06420 NZ_CP100601.1 Protein Homology CDS 1309296 1310291 . + 0 ID=cds-WP_004149336.1;Parent=gene-NLI98_RS06425;Dbxref=Genbank:WP_004149336.1;Name=WP_004149336.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228218.1;locus_tag=NLI98_RS06425;product=cytoskeleton protein RodZ;protein_id=WP_004149336.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1310318 1311439 . + . ID=gene-NLI98_RS06430;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=NLI98_RS06430;old_locus_tag=NLI98_06425 NZ_CP100601.1 Protein Homology CDS 1310318 1311439 . + 0 ID=cds-WP_002913892.1;Parent=gene-NLI98_RS06430;Dbxref=Genbank:WP_002913892.1;Name=WP_002913892.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228217.1;locus_tag=NLI98_RS06430;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_002913892.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1311531 1312805 . + . ID=gene-NLI98_RS06435;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=NLI98_RS06435;old_locus_tag=NLI98_06430 NZ_CP100601.1 Protein Homology CDS 1311531 1312805 . + 0 ID=cds-WP_004890421.1;Parent=gene-NLI98_RS06435;Dbxref=Genbank:WP_004890421.1;Name=WP_004890421.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311403.1;locus_tag=NLI98_RS06435;product=histidine--tRNA ligase;protein_id=WP_004890421.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1312840 1313460 . + . ID=gene-NLI98_RS06440;Name=NLI98_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06440;old_locus_tag=NLI98_06435 NZ_CP100601.1 Protein Homology CDS 1312840 1313460 . + 0 ID=cds-WP_002913890.1;Parent=gene-NLI98_RS06440;Dbxref=Genbank:WP_002913890.1;Name=WP_002913890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228215.1;locus_tag=NLI98_RS06440;product=YfgM family protein;protein_id=WP_002913890.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1313471 1314649 . + . ID=gene-NLI98_RS06445;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=NLI98_RS06445;old_locus_tag=NLI98_06440 NZ_CP100601.1 Protein Homology CDS 1313471 1314649 . + 0 ID=cds-WP_002913889.1;Parent=gene-NLI98_RS06445;Dbxref=Genbank:WP_002913889.1;Name=WP_002913889.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228214.1;locus_tag=NLI98_RS06445;product=outer membrane protein assembly factor BamB;protein_id=WP_002913889.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1314763 1316241 . + . ID=gene-NLI98_RS06450;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=NLI98_RS06450;old_locus_tag=NLI98_06445 NZ_CP100601.1 Protein Homology CDS 1314763 1316241 . + 0 ID=cds-WP_004144309.1;Parent=gene-NLI98_RS06450;Dbxref=Genbank:WP_004144309.1;Name=WP_004144309.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461454.1;locus_tag=NLI98_RS06450;product=ribosome biogenesis GTPase Der;protein_id=WP_004144309.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1316359 1317438 . + . ID=gene-NLI98_RS06455;Name=NLI98_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06455;old_locus_tag=NLI98_06450 NZ_CP100601.1 Protein Homology CDS 1316359 1317438 . + 0 ID=cds-WP_004180886.1;Parent=gene-NLI98_RS06455;Dbxref=Genbank:WP_004180886.1;Name=WP_004180886.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228212.1;locus_tag=NLI98_RS06455;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_004180886.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1317488 1317706 . + . ID=gene-NLI98_RS06460;Name=NLI98_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06460;old_locus_tag=NLI98_06455 NZ_CP100601.1 Protein Homology CDS 1317488 1317706 . + 0 ID=cds-WP_004144303.1;Parent=gene-NLI98_RS06460;Dbxref=Genbank:WP_004144303.1;Name=WP_004144303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228211.1;locus_tag=NLI98_RS06460;product=zinc ribbon domain-containing protein;protein_id=WP_004144303.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1317690 1319081 . - . ID=gene-NLI98_RS06465;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=NLI98_RS06465;old_locus_tag=NLI98_06460 NZ_CP100601.1 Protein Homology CDS 1317690 1319081 . - 0 ID=cds-WP_088498328.1;Parent=gene-NLI98_RS06465;Dbxref=Genbank:WP_088498328.1;Name=WP_088498328.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228210.1;locus_tag=NLI98_RS06465;product=exodeoxyribonuclease VII large subunit;protein_id=WP_088498328.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1319240 1320706 . + . ID=gene-NLI98_RS06470;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=NLI98_RS06470;old_locus_tag=NLI98_06465 NZ_CP100601.1 Protein Homology CDS 1319240 1320706 . + 0 ID=cds-WP_004151980.1;Parent=gene-NLI98_RS06470;Dbxref=Genbank:WP_004151980.1;Name=WP_004151980.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151980.1;locus_tag=NLI98_RS06470;product=IMP dehydrogenase;protein_id=WP_004151980.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1320774 1322351 . + . ID=gene-NLI98_RS06475;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=NLI98_RS06475;old_locus_tag=NLI98_06470 NZ_CP100601.1 Protein Homology CDS 1320774 1322351 . + 0 ID=cds-WP_004151979.1;Parent=gene-NLI98_RS06475;Dbxref=Genbank:WP_004151979.1;Name=WP_004151979.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130181.1;locus_tag=NLI98_RS06475;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_004151979.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1322446 1324314 . - . ID=gene-NLI98_RS06480;Name=NLI98_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06480;old_locus_tag=NLI98_06475 NZ_CP100601.1 Protein Homology CDS 1322446 1324314 . - 0 ID=cds-WP_009309501.1;Parent=gene-NLI98_RS06480;Dbxref=Genbank:WP_009309501.1;Name=WP_009309501.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228206.1;locus_tag=NLI98_RS06480;product=sulfatase-like hydrolase/transferase;protein_id=WP_009309501.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1324298 1325476 . - . ID=gene-NLI98_RS06485;Name=NLI98_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06485;old_locus_tag=NLI98_06480 NZ_CP100601.1 Protein Homology CDS 1324298 1325476 . - 0 ID=cds-WP_029884024.1;Parent=gene-NLI98_RS06485;Dbxref=Genbank:WP_029884024.1;Name=WP_029884024.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004162150.1;locus_tag=NLI98_RS06485;product=anaerobic sulfatase maturase;protein_id=WP_029884024.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1325770 1327002 . - . ID=gene-NLI98_RS06490;Name=NLI98_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06490;old_locus_tag=NLI98_06485 NZ_CP100601.1 Protein Homology CDS 1325770 1327002 . - 0 ID=cds-WP_004149291.1;Parent=gene-NLI98_RS06490;Dbxref=Genbank:WP_004149291.1;Name=WP_004149291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228204.1;locus_tag=NLI98_RS06490;product=MFS transporter;protein_id=WP_004149291.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1327076 1327987 . + . ID=gene-NLI98_RS06495;Name=NLI98_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06495;old_locus_tag=NLI98_06490 NZ_CP100601.1 Protein Homology CDS 1327076 1327987 . + 0 ID=cds-WP_004221278.1;Parent=gene-NLI98_RS06495;Dbxref=Genbank:WP_004221278.1;Name=WP_004221278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228203.1;locus_tag=NLI98_RS06495;product=LysR family transcriptional regulator;protein_id=WP_004221278.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1328084 1328257 . - . ID=gene-NLI98_RS06500;Name=NLI98_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06500;old_locus_tag=NLI98_06495 NZ_CP100601.1 Protein Homology CDS 1328084 1328257 . - 0 ID=cds-WP_004174861.1;Parent=gene-NLI98_RS06500;Dbxref=Genbank:WP_004174861.1;Name=WP_004174861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228202.1;locus_tag=NLI98_RS06500;product=DUF2633 family protein;protein_id=WP_004174861.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1328628 1330856 . + . ID=gene-NLI98_RS06505;Name=NLI98_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06505;old_locus_tag=NLI98_06500 NZ_CP100601.1 Protein Homology CDS 1328628 1330856 . + 0 ID=cds-WP_088498329.1;Parent=gene-NLI98_RS06505;Dbxref=Genbank:WP_088498329.1;Name=WP_088498329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228201.1;locus_tag=NLI98_RS06505;product=sensor domain-containing phosphodiesterase;protein_id=WP_088498329.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1330910 1332442 . - . ID=gene-NLI98_RS06510;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=NLI98_RS06510;old_locus_tag=NLI98_06505 NZ_CP100601.1 Protein Homology CDS 1330910 1332442 . - 0 ID=cds-WP_002913839.1;Parent=gene-NLI98_RS06510;Dbxref=Genbank:WP_002913839.1;Name=WP_002913839.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913839.1;locus_tag=NLI98_RS06510;product=exopolyphosphatase;protein_id=WP_002913839.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1332446 1334506 . - . ID=gene-NLI98_RS06515;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=NLI98_RS06515;old_locus_tag=NLI98_06510 NZ_CP100601.1 Protein Homology CDS 1332446 1334506 . - 0 ID=cds-WP_002913838.1;Parent=gene-NLI98_RS06515;Dbxref=Genbank:WP_002913838.1;Name=WP_002913838.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228199.1;locus_tag=NLI98_RS06515;product=polyphosphate kinase 1;protein_id=WP_002913838.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1334687 1335328 . - . ID=gene-NLI98_RS06520;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=NLI98_RS06520;old_locus_tag=NLI98_06515 NZ_CP100601.1 Protein Homology CDS 1334687 1335328 . - 0 ID=cds-WP_004145656.1;Parent=gene-NLI98_RS06520;Dbxref=Genbank:WP_004145656.1;Name=WP_004145656.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228198.1;locus_tag=NLI98_RS06520;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_004145656.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1335325 1336362 . - . ID=gene-NLI98_RS06525;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=NLI98_RS06525;old_locus_tag=NLI98_06520 NZ_CP100601.1 Protein Homology CDS 1335325 1336362 . - 0 ID=cds-WP_004149288.1;Parent=gene-NLI98_RS06525;Dbxref=Genbank:WP_004149288.1;Name=WP_004149288.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228197.1;locus_tag=NLI98_RS06525;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_004149288.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1336626 1337519 . + . ID=gene-NLI98_RS06530;Name=NLI98_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06530;old_locus_tag=NLI98_06525 NZ_CP100601.1 Protein Homology CDS 1336626 1337519 . + 0 ID=cds-WP_049025550.1;Parent=gene-NLI98_RS06530;Dbxref=Genbank:WP_049025550.1;Name=WP_049025550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228196.1;locus_tag=NLI98_RS06530;product=ROK family protein;protein_id=WP_049025550.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1337529 1338962 . + . ID=gene-NLI98_RS06535;Name=NLI98_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06535;old_locus_tag=NLI98_06530 NZ_CP100601.1 Protein Homology CDS 1337529 1338962 . + 0 ID=cds-WP_002913829.1;Parent=gene-NLI98_RS06535;Dbxref=Genbank:WP_002913829.1;Name=WP_002913829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004149286.1;locus_tag=NLI98_RS06535;product=6-phospho-beta-glucosidase;protein_id=WP_002913829.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1339180 1339806 . + . ID=gene-NLI98_RS06540;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=NLI98_RS06540;old_locus_tag=NLI98_06535 NZ_CP100601.1 Protein Homology CDS 1339180 1339806 . + 0 ID=cds-WP_002913827.1;Parent=gene-NLI98_RS06540;Dbxref=Genbank:WP_002913827.1;Name=WP_002913827.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=NLI98_RS06540;product=uracil phosphoribosyltransferase;protein_id=WP_002913827.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1339902 1341188 . + . ID=gene-NLI98_RS06545;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=NLI98_RS06545;old_locus_tag=NLI98_06540 NZ_CP100601.1 Protein Homology CDS 1339902 1341188 . + 0 ID=cds-WP_002913824.1;Parent=gene-NLI98_RS06545;Dbxref=Genbank:WP_002913824.1;Name=WP_002913824.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228193.1;locus_tag=NLI98_RS06545;product=uracil permease;protein_id=WP_002913824.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1341287 1341988 . + . ID=gene-NLI98_RS06550;Name=NLI98_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06550;old_locus_tag=NLI98_06545 NZ_CP100601.1 Protein Homology CDS 1341287 1341988 . + 0 ID=cds-WP_020947395.1;Parent=gene-NLI98_RS06550;Dbxref=Genbank:WP_020947395.1;Name=WP_020947395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416991.2;locus_tag=NLI98_RS06550;product=DnaA inactivator Hda;protein_id=WP_020947395.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1341985 1342896 . - . ID=gene-NLI98_RS06555;Name=NLI98_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06555;old_locus_tag=NLI98_06550 NZ_CP100601.1 Protein Homology CDS 1341985 1342896 . - 0 ID=cds-WP_002913812.1;Parent=gene-NLI98_RS06555;Dbxref=Genbank:WP_002913812.1;Name=WP_002913812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228191.1;locus_tag=NLI98_RS06555;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_002913812.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1343024 1343383 . - . ID=gene-NLI98_RS06560;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=NLI98_RS06560;old_locus_tag=NLI98_06555 NZ_CP100601.1 Protein Homology CDS 1343024 1343383 . - 0 ID=cds-WP_004174871.1;Parent=gene-NLI98_RS06560;Dbxref=Genbank:WP_004174871.1;Name=WP_004174871.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228190.1;locus_tag=NLI98_RS06560;product=arsenate reductase (glutaredoxin);protein_id=WP_004174871.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1343393 1344856 . - . ID=gene-NLI98_RS06565;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=NLI98_RS06565;old_locus_tag=NLI98_06560 NZ_CP100601.1 Protein Homology CDS 1343393 1344856 . - 0 ID=cds-WP_002913807.1;Parent=gene-NLI98_RS06565;Dbxref=Genbank:WP_002913807.1;Name=WP_002913807.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228189.1;locus_tag=NLI98_RS06565;product=beta-barrel assembly-enhancing protease;protein_id=WP_002913807.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1344908 1345024 . + . ID=gene-NLI98_RS06570;Name=NLI98_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06570;old_locus_tag=NLI98_06565 NZ_CP100601.1 Protein Homology CDS 1344908 1345024 . + 0 ID=cds-WP_004221267.1;Parent=gene-NLI98_RS06570;Dbxref=Genbank:WP_004221267.1;Name=WP_004221267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228188.1;locus_tag=NLI98_RS06570;product=hypothetical protein;protein_id=WP_004221267.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1345079 1346140 . + . ID=gene-NLI98_RS06575;Name=NLI98_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06575;old_locus_tag=NLI98_06570 NZ_CP100601.1 Protein Homology CDS 1345079 1346140 . + 0 ID=cds-WP_002913806.1;Parent=gene-NLI98_RS06575;Dbxref=Genbank:WP_002913806.1;Name=WP_002913806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228187.1;locus_tag=NLI98_RS06575;product=AI-2E family transporter;protein_id=WP_002913806.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1346201 1346671 . - . ID=gene-NLI98_RS06580;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=NLI98_RS06580;old_locus_tag=NLI98_06575 NZ_CP100601.1 Protein Homology CDS 1346201 1346671 . - 0 ID=cds-WP_002913805.1;Parent=gene-NLI98_RS06580;Dbxref=Genbank:WP_002913805.1;Name=WP_002913805.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228186.1;locus_tag=NLI98_RS06580;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_002913805.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1346675 1347241 . - . ID=gene-NLI98_RS06585;Name=NLI98_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06585;old_locus_tag=NLI98_06580 NZ_CP100601.1 Protein Homology CDS 1346675 1347241 . - 0 ID=cds-WP_002913804.1;Parent=gene-NLI98_RS06585;Dbxref=Genbank:WP_002913804.1;Name=WP_002913804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228185.1;locus_tag=NLI98_RS06585;product=glycine cleavage system transcriptional repressor;protein_id=WP_002913804.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1347395 1348273 . + . ID=gene-NLI98_RS06590;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=NLI98_RS06590;old_locus_tag=NLI98_06585 NZ_CP100601.1 Protein Homology CDS 1347395 1348273 . + 0 ID=cds-WP_002913803.1;Parent=gene-NLI98_RS06590;Dbxref=Genbank:WP_002913803.1;Name=WP_002913803.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001311023.1;locus_tag=NLI98_RS06590;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_002913803.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1348290 1349324 . + . ID=gene-NLI98_RS06595;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=NLI98_RS06595;old_locus_tag=NLI98_06590 NZ_CP100601.1 Protein Homology CDS 1348290 1349324 . + 0 ID=cds-WP_004149279.1;Parent=gene-NLI98_RS06595;Dbxref=Genbank:WP_004149279.1;Name=WP_004149279.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228183.1;locus_tag=NLI98_RS06595;product=outer membrane protein assembly factor BamC;protein_id=WP_004149279.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1349541 1350254 . + . ID=gene-NLI98_RS06600;Name=NLI98_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06600;old_locus_tag=NLI98_06595 NZ_CP100601.1 Protein Homology CDS 1349541 1350254 . + 0 ID=cds-WP_002913801.1;Parent=gene-NLI98_RS06600;Dbxref=Genbank:WP_002913801.1;Name=WP_002913801.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=NLI98_RS06600;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_002913801.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1350374 1351249 . + . ID=gene-NLI98_RS06605;Name=NLI98_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06605;old_locus_tag=NLI98_06600 NZ_CP100601.1 Protein Homology CDS 1350374 1351249 . + 0 ID=cds-WP_002913800.1;Parent=gene-NLI98_RS06605;Dbxref=Genbank:WP_002913800.1;Name=WP_002913800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228181.1;locus_tag=NLI98_RS06605;product=neutral zinc metallopeptidase;protein_id=WP_002913800.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1351259 1353262 . + . ID=gene-NLI98_RS06610;Name=NLI98_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06610;old_locus_tag=NLI98_06605 NZ_CP100601.1 Protein Homology CDS 1351259 1353262 . + 0 ID=cds-WP_088498332.1;Parent=gene-NLI98_RS06610;Dbxref=Genbank:WP_088498332.1;Name=WP_088498332.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317228.1;locus_tag=NLI98_RS06610;product=GNAT family N-acetyltransferase;protein_id=WP_088498332.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1353339 1354034 . + . ID=gene-NLI98_RS06615;Name=ypfH;gbkey=Gene;gene=ypfH;gene_biotype=protein_coding;locus_tag=NLI98_RS06615;old_locus_tag=NLI98_06610 NZ_CP100601.1 Protein Homology CDS 1353339 1354034 . + 0 ID=cds-WP_002913770.1;Parent=gene-NLI98_RS06615;Dbxref=Genbank:WP_002913770.1;Name=WP_002913770.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ypfH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228178.1;locus_tag=NLI98_RS06615;product=esterase;protein_id=WP_002913770.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1354083 1354286 . - . ID=gene-NLI98_RS06620;Name=NLI98_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06620;old_locus_tag=NLI98_06615 NZ_CP100601.1 Protein Homology CDS 1354083 1354286 . - 0 ID=cds-WP_088498333.1;Parent=gene-NLI98_RS06620;Dbxref=Genbank:WP_088498333.1;Name=WP_088498333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228177.1;locus_tag=NLI98_RS06620;product=YpfN family protein;protein_id=WP_088498333.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1354313 1355440 . - . ID=gene-NLI98_RS06625;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=NLI98_RS06625;old_locus_tag=NLI98_06620 NZ_CP100601.1 Protein Homology CDS 1354313 1355440 . - 0 ID=cds-WP_002913766.1;Parent=gene-NLI98_RS06625;Dbxref=Genbank:WP_002913766.1;Name=WP_002913766.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078199.1;locus_tag=NLI98_RS06625;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_002913766.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1355444 1355797 . - . ID=gene-NLI98_RS06630;Name=NLI98_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06630;old_locus_tag=NLI98_06625 NZ_CP100601.1 Protein Homology CDS 1355444 1355797 . - 0 ID=cds-WP_002913764.1;Parent=gene-NLI98_RS06630;Dbxref=Genbank:WP_002913764.1;Name=WP_002913764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228175.1;locus_tag=NLI98_RS06630;product=ArsC family reductase;protein_id=WP_002913764.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1356163 1356222 . + . ID=gene-NLI98_RS06635;Name=ypfM;gbkey=Gene;gene=ypfM;gene_biotype=protein_coding;locus_tag=NLI98_RS06635;old_locus_tag=NLI98_06630 NZ_CP100601.1 Protein Homology CDS 1356163 1356222 . + 0 ID=cds-WP_100181659.1;Parent=gene-NLI98_RS06635;Dbxref=Genbank:WP_100181659.1;Name=WP_100181659.1;gbkey=CDS;gene=ypfM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_001165325.1;locus_tag=NLI98_RS06635;product=protein YpfM;protein_id=WP_100181659.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1356350 1359463 . - . ID=gene-NLI98_RS06640;Name=acrD;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=NLI98_RS06640;old_locus_tag=NLI98_06635 NZ_CP100601.1 Protein Homology CDS 1356350 1359463 . - 0 ID=cds-WP_004185072.1;Parent=gene-NLI98_RS06640;Dbxref=Genbank:WP_004185072.1;Name=WP_004185072.1;Ontology_term=GO:0042908,GO:0015562;gbkey=CDS;gene=acrD;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228174.1;locus_tag=NLI98_RS06640;product=multidrug efflux RND transporter permease AcrD;protein_id=WP_004185072.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1359836 1361818 . + . ID=gene-NLI98_RS06645;Name=aegA;gbkey=Gene;gene=aegA;gene_biotype=protein_coding;locus_tag=NLI98_RS06645;old_locus_tag=NLI98_06640 NZ_CP100601.1 Protein Homology CDS 1359836 1361818 . + 0 ID=cds-WP_021465898.1;Parent=gene-NLI98_RS06645;Dbxref=Genbank:WP_021465898.1;Name=WP_021465898.1;Ontology_term=GO:0016491;gbkey=CDS;gene=aegA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228173.1;locus_tag=NLI98_RS06645;product=formate-dependent uric acid utilization protein AegA;protein_id=WP_021465898.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1361877 1362473 . + . ID=gene-NLI98_RS06650;Name=nudK;gbkey=Gene;gene=nudK;gene_biotype=protein_coding;locus_tag=NLI98_RS06650;old_locus_tag=NLI98_06645 NZ_CP100601.1 Protein Homology CDS 1361877 1362473 . + 0 ID=cds-WP_002913754.1;Parent=gene-NLI98_RS06650;Dbxref=Genbank:WP_002913754.1;Name=WP_002913754.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;gene=nudK;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228172.1;locus_tag=NLI98_RS06650;product=GDP-mannose pyrophosphatase NudK;protein_id=WP_002913754.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1362537 1363583 . + . ID=gene-NLI98_RS06655;Name=NLI98_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06655;old_locus_tag=NLI98_06650 NZ_CP100601.1 Protein Homology CDS 1362537 1363583 . + 0 ID=cds-WP_088498334.1;Parent=gene-NLI98_RS06655;Dbxref=Genbank:WP_088498334.1;Name=WP_088498334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014907129.1;locus_tag=NLI98_RS06655;product=DUF1176 domain-containing protein;protein_id=WP_088498334.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1363573 1365567 . - . ID=gene-NLI98_RS06660;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=NLI98_RS06660;old_locus_tag=NLI98_06655 NZ_CP100601.1 Protein Homology CDS 1363573 1365567 . - 0 ID=cds-WP_004149269.1;Parent=gene-NLI98_RS06660;Dbxref=Genbank:WP_004149269.1;Name=WP_004149269.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228169.1;locus_tag=NLI98_RS06660;product=transketolase;protein_id=WP_004149269.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1365584 1366540 . - . ID=gene-NLI98_RS06665;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=NLI98_RS06665;old_locus_tag=NLI98_06660 NZ_CP100601.1 Protein Homology CDS 1365584 1366540 . - 0 ID=cds-WP_004174884.1;Parent=gene-NLI98_RS06665;Dbxref=Genbank:WP_004174884.1;Name=WP_004174884.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228168.1;locus_tag=NLI98_RS06665;product=transaldolase;protein_id=WP_004174884.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1366835 1369114 . + . ID=gene-NLI98_RS06670;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=NLI98_RS06670;old_locus_tag=NLI98_06665 NZ_CP100601.1 Protein Homology CDS 1366835 1369114 . + 0 ID=cds-WP_016947281.1;Parent=gene-NLI98_RS06670;Dbxref=Genbank:WP_016947281.1;Name=WP_016947281.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228167.1;locus_tag=NLI98_RS06670;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_016947281.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1369333 1369668 . + . ID=gene-NLI98_RS06675;Name=eutS;gbkey=Gene;gene=eutS;gene_biotype=protein_coding;locus_tag=NLI98_RS06675;old_locus_tag=NLI98_06670 NZ_CP100601.1 Protein Homology CDS 1369333 1369668 . + 0 ID=cds-WP_002913729.1;Parent=gene-NLI98_RS06675;Dbxref=Genbank:WP_002913729.1;Name=WP_002913729.1;gbkey=CDS;gene=eutS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228166.1;locus_tag=NLI98_RS06675;product=ethanolamine utilization microcompartment protein EutS;protein_id=WP_002913729.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1369681 1370160 . + . ID=gene-NLI98_RS06680;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=protein_coding;locus_tag=NLI98_RS06680;old_locus_tag=NLI98_06675 NZ_CP100601.1 Protein Homology CDS 1369681 1370160 . + 0 ID=cds-WP_002913727.1;Parent=gene-NLI98_RS06680;Dbxref=Genbank:WP_002913727.1;Name=WP_002913727.1;gbkey=CDS;gene=eutP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228165.1;locus_tag=NLI98_RS06680;product=ethanolamine utilization acetate kinase EutP;protein_id=WP_002913727.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1370138 1370827 . + . ID=gene-NLI98_RS06685;Name=eutQ;gbkey=Gene;gene=eutQ;gene_biotype=protein_coding;locus_tag=NLI98_RS06685;old_locus_tag=NLI98_06680 NZ_CP100601.1 Protein Homology CDS 1370138 1370827 . + 0 ID=cds-WP_002913725.1;Parent=gene-NLI98_RS06685;Dbxref=Genbank:WP_002913725.1;Name=WP_002913725.1;gbkey=CDS;gene=eutQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228164.1;locus_tag=NLI98_RS06685;product=ethanolamine utilization acetate kinase EutQ;protein_id=WP_002913725.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1370824 1371630 . + . ID=gene-NLI98_RS06690;Name=eutT;gbkey=Gene;gene=eutT;gene_biotype=protein_coding;locus_tag=NLI98_RS06690;old_locus_tag=NLI98_06685 NZ_CP100601.1 Protein Homology CDS 1370824 1371630 . + 0 ID=cds-WP_002913723.1;Parent=gene-NLI98_RS06690;Dbxref=Genbank:WP_002913723.1;Name=WP_002913723.1;Ontology_term=GO:0006580,GO:0008817;gbkey=CDS;gene=eutT;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=ethanolamine metabolic process|0006580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228163.1;locus_tag=NLI98_RS06690;product=ethanolamine utilization cob(I)yrinic acid a%2Cc-diamide adenosyltransferase EutT;protein_id=WP_002913723.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1371620 1372636 . + . ID=gene-NLI98_RS06695;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=NLI98_RS06695;old_locus_tag=NLI98_06690 NZ_CP100601.1 Protein Homology CDS 1371620 1372636 . + 0 ID=cds-WP_002913722.1;Parent=gene-NLI98_RS06695;Dbxref=Genbank:WP_002913722.1;Name=WP_002913722.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228162.1;locus_tag=NLI98_RS06695;product=phosphate acetyltransferase;protein_id=WP_002913722.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1372675 1372965 . + . ID=gene-NLI98_RS06700;Name=eutM;gbkey=Gene;gene=eutM;gene_biotype=protein_coding;locus_tag=NLI98_RS06700;old_locus_tag=NLI98_06695 NZ_CP100601.1 Protein Homology CDS 1372675 1372965 . + 0 ID=cds-WP_000387720.1;Parent=gene-NLI98_RS06700;Dbxref=Genbank:WP_000387720.1;Name=WP_000387720.1;gbkey=CDS;gene=eutM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228161.1;locus_tag=NLI98_RS06700;product=ethanolamine utilization microcompartment protein EutM;protein_id=WP_000387720.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1373094 1373381 . + . ID=gene-NLI98_RS06705;Name=eutN;gbkey=Gene;gene=eutN;gene_biotype=protein_coding;locus_tag=NLI98_RS06705;old_locus_tag=NLI98_06700 NZ_CP100601.1 Protein Homology CDS 1373094 1373381 . + 0 ID=cds-WP_002913719.1;Parent=gene-NLI98_RS06705;Dbxref=Genbank:WP_002913719.1;Name=WP_002913719.1;gbkey=CDS;gene=eutN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228160.1;locus_tag=NLI98_RS06705;product=ethanolamine utilization microcompartment protein EutN;protein_id=WP_002913719.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1373393 1374796 . + . ID=gene-NLI98_RS06710;Name=NLI98_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06710;old_locus_tag=NLI98_06705 NZ_CP100601.1 Protein Homology CDS 1373393 1374796 . + 0 ID=cds-WP_004152003.1;Parent=gene-NLI98_RS06710;Dbxref=Genbank:WP_004152003.1;Name=WP_004152003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228159.1;locus_tag=NLI98_RS06710;product=aldehyde dehydrogenase EutE;protein_id=WP_004152003.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1374806 1375645 . + . ID=gene-NLI98_RS06715;Name=eutJ;gbkey=Gene;gene=eutJ;gene_biotype=protein_coding;locus_tag=NLI98_RS06715;old_locus_tag=NLI98_06710 NZ_CP100601.1 Protein Homology CDS 1374806 1375645 . + 0 ID=cds-WP_004180842.1;Parent=gene-NLI98_RS06715;Dbxref=Genbank:WP_004180842.1;Name=WP_004180842.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=eutJ;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228158.1;locus_tag=NLI98_RS06715;product=ethanolamine utilization protein EutJ;protein_id=WP_004180842.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1375635 1376822 . + . ID=gene-NLI98_RS06720;Name=eutG;gbkey=Gene;gene=eutG;gene_biotype=protein_coding;locus_tag=NLI98_RS06720;old_locus_tag=NLI98_06715 NZ_CP100601.1 Protein Homology CDS 1375635 1376822 . + 0 ID=cds-WP_048997750.1;Parent=gene-NLI98_RS06720;Dbxref=Genbank:WP_048997750.1;Name=WP_048997750.1;Ontology_term=GO:0016491;gbkey=CDS;gene=eutG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228157.1;locus_tag=NLI98_RS06720;product=ethanolamine utilization ethanol dehydrogenase EutG;protein_id=WP_048997750.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1377022 1378254 . + . ID=gene-NLI98_RS06725;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=protein_coding;locus_tag=NLI98_RS06725;old_locus_tag=NLI98_06720 NZ_CP100601.1 Protein Homology CDS 1377022 1378254 . + 0 ID=cds-WP_004180838.1;Parent=gene-NLI98_RS06725;Dbxref=Genbank:WP_004180838.1;Name=WP_004180838.1;Ontology_term=GO:0034229,GO:0034228,GO:0016020;gbkey=CDS;gene=eutH;go_component=membrane|0016020||IEA;go_function=ethanolamine transmembrane transporter activity|0034228||IEA;go_process=ethanolamine transport|0034229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228156.1;locus_tag=NLI98_RS06725;product=ethanolamine utilization protein EutH;protein_id=WP_004180838.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1378251 1379654 . + . ID=gene-NLI98_RS06730;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=NLI98_RS06730;old_locus_tag=NLI98_06725 NZ_CP100601.1 Protein Homology CDS 1378251 1379654 . + 0 ID=cds-WP_004185053.1;Parent=gene-NLI98_RS06730;Dbxref=Genbank:WP_004185053.1;Name=WP_004185053.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228155.1;locus_tag=NLI98_RS06730;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=WP_004185053.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1379666 1381027 . + . ID=gene-NLI98_RS06735;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=NLI98_RS06735;old_locus_tag=NLI98_06730 NZ_CP100601.1 Protein Homology CDS 1379666 1381027 . + 0 ID=cds-WP_004152001.1;Parent=gene-NLI98_RS06735;Dbxref=Genbank:WP_004152001.1;Name=WP_004152001.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228154.1;locus_tag=NLI98_RS06735;product=ethanolamine ammonia-lyase subunit alpha;protein_id=WP_004152001.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1381048 1381947 . + . ID=gene-NLI98_RS06740;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=NLI98_RS06740;old_locus_tag=NLI98_06735 NZ_CP100601.1 Protein Homology CDS 1381048 1381947 . + 0 ID=cds-WP_004174901.1;Parent=gene-NLI98_RS06740;Dbxref=Genbank:WP_004174901.1;Name=WP_004174901.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228153.1;locus_tag=NLI98_RS06740;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_004174901.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1381957 1382616 . + . ID=gene-NLI98_RS06745;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=NLI98_RS06745;old_locus_tag=NLI98_06740 NZ_CP100601.1 Protein Homology CDS 1381957 1382616 . + 0 ID=cds-WP_004174905.1;Parent=gene-NLI98_RS06745;Dbxref=Genbank:WP_004174905.1;Name=WP_004174905.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461391.1;locus_tag=NLI98_RS06745;product=ethanolamine utilization microcompartment protein EutL;protein_id=WP_004174905.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1382628 1383113 . + . ID=gene-NLI98_RS06750;Name=eutK;gbkey=Gene;gene=eutK;gene_biotype=protein_coding;locus_tag=NLI98_RS06750;old_locus_tag=NLI98_06745 NZ_CP100601.1 Protein Homology CDS 1382628 1383113 . + 0 ID=cds-WP_004151997.1;Parent=gene-NLI98_RS06750;Dbxref=Genbank:WP_004151997.1;Name=WP_004151997.1;gbkey=CDS;gene=eutK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228151.1;locus_tag=NLI98_RS06750;product=ethanolamine utilization microcompartment protein EutK;protein_id=WP_004151997.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1383159 1384211 . + . ID=gene-NLI98_RS06755;Name=eutR;gbkey=Gene;gene=eutR;gene_biotype=protein_coding;locus_tag=NLI98_RS06755;old_locus_tag=NLI98_06750 NZ_CP100601.1 Protein Homology CDS 1383159 1384211 . + 0 ID=cds-WP_002913642.1;Parent=gene-NLI98_RS06755;Dbxref=Genbank:WP_002913642.1;Name=WP_002913642.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=eutR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913642.1;locus_tag=NLI98_RS06755;product=HTH-type transcriptional regulator EutR;protein_id=WP_002913642.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1384255 1385154 . - . ID=gene-NLI98_RS06760;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=NLI98_RS06760;old_locus_tag=NLI98_06755 NZ_CP100601.1 Protein Homology CDS 1384255 1385154 . - 0 ID=cds-WP_002913641.1;Parent=gene-NLI98_RS06760;Dbxref=Genbank:WP_002913641.1;Name=WP_002913641.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228149.1;locus_tag=NLI98_RS06760;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_002913641.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1385154 1386026 . - . ID=gene-NLI98_RS06765;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=NLI98_RS06765;old_locus_tag=NLI98_06760 NZ_CP100601.1 Protein Homology CDS 1385154 1386026 . - 0 ID=cds-WP_002913639.1;Parent=gene-NLI98_RS06765;Dbxref=Genbank:WP_002913639.1;Name=WP_002913639.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiA;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228148.1;locus_tag=NLI98_RS06765;product=N-acetylmuramoyl-L-alanine amidase AmiA;protein_id=WP_002913639.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1386238 1386663 . + . ID=gene-NLI98_RS06770;Name=NLI98_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06770;old_locus_tag=NLI98_06765 NZ_CP100601.1 Protein Homology CDS 1386238 1386663 . + 0 ID=cds-WP_002913637.1;Parent=gene-NLI98_RS06770;Dbxref=Genbank:WP_002913637.1;Name=WP_002913637.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228147.1;locus_tag=NLI98_RS06770;product=GNAT family acetyltransferase;protein_id=WP_002913637.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1386650 1387099 . + . ID=gene-NLI98_RS06775;Name=NLI98_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06775;old_locus_tag=NLI98_06770 NZ_CP100601.1 Protein Homology CDS 1386650 1387099 . + 0 ID=cds-WP_002913635.1;Parent=gene-NLI98_RS06775;Dbxref=Genbank:WP_002913635.1;Name=WP_002913635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228146.1;locus_tag=NLI98_RS06775;product=DUF2919 domain-containing protein;protein_id=WP_002913635.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1387161 1387736 . + . ID=gene-NLI98_RS06780;Name=NLI98_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06780;old_locus_tag=NLI98_06775 NZ_CP100601.1 Protein Homology CDS 1387161 1387736 . + 0 ID=cds-WP_002913630.1;Parent=gene-NLI98_RS06780;Dbxref=Genbank:WP_002913630.1;Name=WP_002913630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228145.1;locus_tag=NLI98_RS06780;product=RpoE-regulated lipoprotein;protein_id=WP_002913630.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1387831 1388730 . + . ID=gene-NLI98_RS06785;Name=NLI98_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06785;old_locus_tag=NLI98_06780 NZ_CP100601.1 Protein Homology CDS 1387831 1388730 . + 0 ID=cds-WP_088498335.1;Parent=gene-NLI98_RS06785;Dbxref=Genbank:WP_088498335.1;Name=WP_088498335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228144.1;locus_tag=NLI98_RS06785;product=Dyp-type peroxidase;protein_id=WP_088498335.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1388826 1389169 . - . ID=gene-NLI98_RS06790;Name=NLI98_RS06790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS06790;old_locus_tag=NLI98_06785;pseudo=true NZ_CP100601.1 Protein Homology CDS 1388826 1389169 . - 0 ID=cds-NLI98_RS06790;Parent=gene-NLI98_RS06790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201988.1;locus_tag=NLI98_RS06790;product=DUF559 domain-containing protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 1389370 1390386 . + . ID=gene-NLI98_RS06795;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=NLI98_RS06795;old_locus_tag=NLI98_06790 NZ_CP100601.1 Protein Homology CDS 1389370 1390386 . + 0 ID=cds-WP_002913628.1;Parent=gene-NLI98_RS06795;Dbxref=Genbank:WP_002913628.1;Name=WP_002913628.1;gbkey=CDS;gene=cysP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228141.1;locus_tag=NLI98_RS06795;product=thiosulfate/sulfate ABC transporter substrate-binding protein CysP;protein_id=WP_002913628.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1390386 1391219 . + . ID=gene-NLI98_RS06800;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=NLI98_RS06800;old_locus_tag=NLI98_06795 NZ_CP100601.1 Protein Homology CDS 1390386 1391219 . + 0 ID=cds-WP_002913626.1;Parent=gene-NLI98_RS06800;Dbxref=Genbank:WP_002913626.1;Name=WP_002913626.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000458418.1;locus_tag=NLI98_RS06800;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_002913626.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1391219 1392094 . + . ID=gene-NLI98_RS06805;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=NLI98_RS06805;old_locus_tag=NLI98_06800 NZ_CP100601.1 Protein Homology CDS 1391219 1392094 . + 0 ID=cds-WP_002913625.1;Parent=gene-NLI98_RS06805;Dbxref=Genbank:WP_002913625.1;Name=WP_002913625.1;Ontology_term=GO:0008272,GO:0055085,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228139.1;locus_tag=NLI98_RS06805;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_002913625.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1392084 1393178 . + . ID=gene-NLI98_RS06810;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=NLI98_RS06810;old_locus_tag=NLI98_06805 NZ_CP100601.1 Protein Homology CDS 1392084 1393178 . + 0 ID=cds-WP_002913623.1;Parent=gene-NLI98_RS06810;Dbxref=Genbank:WP_002913623.1;Name=WP_002913623.1;Ontology_term=GO:0008272,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228138.1;locus_tag=NLI98_RS06810;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_002913623.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1393297 1394208 . + . ID=gene-NLI98_RS06815;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=NLI98_RS06815;old_locus_tag=NLI98_06810 NZ_CP100601.1 Protein Homology CDS 1393297 1394208 . + 0 ID=cds-WP_004145610.1;Parent=gene-NLI98_RS06815;Dbxref=Genbank:WP_004145610.1;Name=WP_004145610.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228137.1;locus_tag=NLI98_RS06815;product=cysteine synthase CysM;protein_id=WP_004145610.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1394205 1394600 . - . ID=gene-NLI98_RS06820;Name=NLI98_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06820;old_locus_tag=NLI98_06815 NZ_CP100601.1 Protein Homology CDS 1394205 1394600 . - 0 ID=cds-WP_004145609.1;Parent=gene-NLI98_RS06820;Dbxref=Genbank:WP_004145609.1;Name=WP_004145609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228136.1;locus_tag=NLI98_RS06820;product=DUF4440 domain-containing protein;protein_id=WP_004145609.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1394741 1396039 . - . ID=gene-NLI98_RS06825;Name=ptsJ;gbkey=Gene;gene=ptsJ;gene_biotype=protein_coding;locus_tag=NLI98_RS06825;old_locus_tag=NLI98_06820 NZ_CP100601.1 Protein Homology CDS 1394741 1396039 . - 0 ID=cds-WP_002913617.1;Parent=gene-NLI98_RS06825;Dbxref=Genbank:WP_002913617.1;Name=WP_002913617.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ptsJ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228135.1;locus_tag=NLI98_RS06825;product=transcriptional regulator PtsJ;protein_id=WP_002913617.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1396122 1396988 . + . ID=gene-NLI98_RS06830;Name=pdxK;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;gene_synonym=thiJ;locus_tag=NLI98_RS06830;old_locus_tag=NLI98_06825 NZ_CP100601.1 Protein Homology CDS 1396122 1396988 . + 0 ID=cds-WP_004174917.1;Parent=gene-NLI98_RS06830;Dbxref=Genbank:WP_004174917.1;Name=WP_004174917.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxK;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228134.1;locus_tag=NLI98_RS06830;product=pyridoxine/pyridoxal/pyridoxamine kinase;protein_id=WP_004174917.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1396985 1397224 . + . ID=gene-NLI98_RS06835;Name=NLI98_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06835;old_locus_tag=NLI98_06830 NZ_CP100601.1 Protein Homology CDS 1396985 1397224 . + 0 ID=cds-WP_002913605.1;Parent=gene-NLI98_RS06835;Dbxref=Genbank:WP_002913605.1;Name=WP_002913605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228133.1;locus_tag=NLI98_RS06835;product=hypothetical protein;protein_id=WP_002913605.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1397265 1397774 . - . ID=gene-NLI98_RS06840;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=NLI98_RS06840;old_locus_tag=NLI98_06835 NZ_CP100601.1 Protein Homology CDS 1397265 1397774 . - 0 ID=cds-WP_000522253.1;Parent=gene-NLI98_RS06840;Dbxref=Genbank:WP_000522253.1;Name=WP_000522253.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=NLI98_RS06840;product=PTS glucose transporter subunit IIA;protein_id=WP_000522253.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1397817 1399544 . - . ID=gene-NLI98_RS06845;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=NLI98_RS06845;old_locus_tag=NLI98_06840 NZ_CP100601.1 Protein Homology CDS 1397817 1399544 . - 0 ID=cds-WP_002913506.1;Parent=gene-NLI98_RS06845;Dbxref=Genbank:WP_002913506.1;Name=WP_002913506.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=NLI98_RS06845;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_002913506.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1399589 1399846 . - . ID=gene-NLI98_RS06850;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=NLI98_RS06850;old_locus_tag=NLI98_06845 NZ_CP100601.1 Protein Homology CDS 1399589 1399846 . - 0 ID=cds-WP_002913505.1;Parent=gene-NLI98_RS06850;Dbxref=Genbank:WP_002913505.1;Name=WP_002913505.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=NLI98_RS06850;product=phosphocarrier protein Hpr;protein_id=WP_002913505.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1400227 1401198 . - . ID=gene-NLI98_RS06855;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=NLI98_RS06855;old_locus_tag=NLI98_06850 NZ_CP100601.1 Protein Homology CDS 1400227 1401198 . - 0 ID=cds-WP_002913498.1;Parent=gene-NLI98_RS06855;Dbxref=Genbank:WP_002913498.1;Name=WP_002913498.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000034402.1;locus_tag=NLI98_RS06855;product=cysteine synthase A;protein_id=WP_002913498.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1401375 1402136 . - . ID=gene-NLI98_RS06860;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=NLI98_RS06860;old_locus_tag=NLI98_06855 NZ_CP100601.1 Protein Homology CDS 1401375 1402136 . - 0 ID=cds-WP_088498336.1;Parent=gene-NLI98_RS06860;Dbxref=Genbank:WP_088498336.1;Name=WP_088498336.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228127.1;locus_tag=NLI98_RS06860;product=sulfate transporter CysZ;protein_id=WP_088498336.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1402367 1403428 . + . ID=gene-NLI98_RS06865;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=NLI98_RS06865;old_locus_tag=NLI98_06860 NZ_CP100601.1 Protein Homology CDS 1402367 1403428 . + 0 ID=cds-WP_020317234.1;Parent=gene-NLI98_RS06865;Dbxref=Genbank:WP_020317234.1;Name=WP_020317234.1;Ontology_term=GO:0000917,GO:0005515;gbkey=CDS;gene=zipA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228125.1;locus_tag=NLI98_RS06865;product=cell division protein ZipA;protein_id=WP_020317234.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1403498 1405513 . + . ID=gene-NLI98_RS06870;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=NLI98_RS06870;old_locus_tag=NLI98_06865 NZ_CP100601.1 Protein Homology CDS 1403498 1405513 . + 0 ID=cds-WP_004180820.1;Parent=gene-NLI98_RS06870;Dbxref=Genbank:WP_004180820.1;Name=WP_004180820.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228124.1;locus_tag=NLI98_RS06870;product=NAD-dependent DNA ligase LigA;protein_id=WP_004180820.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1405515 1405733 . + . ID=gene-NLI98_RS06875;Name=NLI98_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06875;old_locus_tag=NLI98_06870 NZ_CP100601.1 Protein Homology CDS 1405515 1405733 . + 0 ID=cds-WP_002913440.1;Parent=gene-NLI98_RS06875;Dbxref=Genbank:WP_002913440.1;Name=WP_002913440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228123.1;locus_tag=NLI98_RS06875;product=DUF3820 family protein;protein_id=WP_002913440.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1405730 1406728 . - . ID=gene-NLI98_RS06880;Name=NLI98_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06880;old_locus_tag=NLI98_06875 NZ_CP100601.1 Protein Homology CDS 1405730 1406728 . - 0 ID=cds-WP_002913439.1;Parent=gene-NLI98_RS06880;Dbxref=Genbank:WP_002913439.1;Name=WP_002913439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228122.1;locus_tag=NLI98_RS06880;product=bile acid:sodium symporter;protein_id=WP_002913439.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1406817 1407743 . + . ID=gene-NLI98_RS06885;Name=NLI98_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06885;old_locus_tag=NLI98_06880 NZ_CP100601.1 Protein Homology CDS 1406817 1407743 . + 0 ID=cds-WP_002913438.1;Parent=gene-NLI98_RS06885;Dbxref=Genbank:WP_002913438.1;Name=WP_002913438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228121.1;locus_tag=NLI98_RS06885;product=LysR family transcriptional regulator;protein_id=WP_002913438.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1407828 1407903 . - . ID=gene-NLI98_RS06890;Name=NLI98_RS06890;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS06890;old_locus_tag=NLI98_06885 NZ_CP100601.1 tRNAscan-SE tRNA 1407828 1407903 . - . ID=rna-NLI98_RS06890;Parent=gene-NLI98_RS06890;anticodon=(pos:complement(1407868..1407870));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS06890;product=tRNA-Lys NZ_CP100601.1 tRNAscan-SE exon 1407828 1407903 . - . ID=exon-NLI98_RS06890-1;Parent=rna-NLI98_RS06890;anticodon=(pos:complement(1407868..1407870));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS06890;product=tRNA-Lys NZ_CP100601.1 RefSeq gene 1407908 1407983 . - . ID=gene-NLI98_RS06895;Name=NLI98_RS06895;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS06895;old_locus_tag=NLI98_06890 NZ_CP100601.1 tRNAscan-SE tRNA 1407908 1407983 . - . ID=rna-NLI98_RS06895;Parent=gene-NLI98_RS06895;anticodon=(pos:complement(1407948..1407950));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS06895;product=tRNA-Val NZ_CP100601.1 tRNAscan-SE exon 1407908 1407983 . - . ID=exon-NLI98_RS06895-1;Parent=rna-NLI98_RS06895;anticodon=(pos:complement(1407948..1407950));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS06895;product=tRNA-Val NZ_CP100601.1 RefSeq gene 1408030 1408105 . - . ID=gene-NLI98_RS06900;Name=NLI98_RS06900;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS06900;old_locus_tag=NLI98_06895 NZ_CP100601.1 tRNAscan-SE tRNA 1408030 1408105 . - . ID=rna-NLI98_RS06900;Parent=gene-NLI98_RS06900;anticodon=(pos:complement(1408070..1408072));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS06900;product=tRNA-Val NZ_CP100601.1 tRNAscan-SE exon 1408030 1408105 . - . ID=exon-NLI98_RS06900-1;Parent=rna-NLI98_RS06900;anticodon=(pos:complement(1408070..1408072));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS06900;product=tRNA-Val NZ_CP100601.1 RefSeq gene 1408151 1408226 . - . ID=gene-NLI98_RS06905;Name=NLI98_RS06905;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS06905;old_locus_tag=NLI98_06900 NZ_CP100601.1 tRNAscan-SE tRNA 1408151 1408226 . - . ID=rna-NLI98_RS06905;Parent=gene-NLI98_RS06905;anticodon=(pos:complement(1408191..1408193));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS06905;product=tRNA-Val NZ_CP100601.1 tRNAscan-SE exon 1408151 1408226 . - . ID=exon-NLI98_RS06905-1;Parent=rna-NLI98_RS06905;anticodon=(pos:complement(1408191..1408193));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS06905;product=tRNA-Val NZ_CP100601.1 RefSeq gene 1408486 1409904 . + . ID=gene-NLI98_RS06910;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=NLI98_RS06910;old_locus_tag=NLI98_06905 NZ_CP100601.1 Protein Homology CDS 1408486 1409904 . + 0 ID=cds-WP_088497999.1;Parent=gene-NLI98_RS06910;Dbxref=Genbank:WP_088497999.1;Name=WP_088497999.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228120.1;locus_tag=NLI98_RS06910;product=glutamate--tRNA ligase;protein_id=WP_088497999.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1409956 1410348 . - . ID=gene-NLI98_RS06915;Name=NLI98_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06915;old_locus_tag=NLI98_06910 NZ_CP100601.1 Protein Homology CDS 1409956 1410348 . - 0 ID=cds-WP_002913435.1;Parent=gene-NLI98_RS06915;Dbxref=Genbank:WP_002913435.1;Name=WP_002913435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228119.1;locus_tag=NLI98_RS06915;product=putative DNA-binding transcriptional regulator;protein_id=WP_002913435.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1410352 1410705 . - . ID=gene-NLI98_RS06920;Name=NLI98_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06920;old_locus_tag=NLI98_06915 NZ_CP100601.1 Protein Homology CDS 1410352 1410705 . - 0 ID=cds-WP_002913434.1;Parent=gene-NLI98_RS06920;Dbxref=Genbank:WP_002913434.1;Name=WP_002913434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228118.1;locus_tag=NLI98_RS06920;product=putative DNA-binding transcriptional regulator;protein_id=WP_002913434.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1410925 1411000 . + . ID=gene-NLI98_RS06925;Name=NLI98_RS06925;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS06925;old_locus_tag=NLI98_06920 NZ_CP100601.1 tRNAscan-SE tRNA 1410925 1411000 . + . ID=rna-NLI98_RS06925;Parent=gene-NLI98_RS06925;anticodon=(pos:1410958..1410960);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS06925;product=tRNA-Ala NZ_CP100601.1 tRNAscan-SE exon 1410925 1411000 . + . ID=exon-NLI98_RS06925-1;Parent=rna-NLI98_RS06925;anticodon=(pos:1410958..1410960);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS06925;product=tRNA-Ala NZ_CP100601.1 RefSeq gene 1411042 1411117 . + . ID=gene-NLI98_RS06930;Name=NLI98_RS06930;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS06930;old_locus_tag=NLI98_06925 NZ_CP100601.1 tRNAscan-SE tRNA 1411042 1411117 . + . ID=rna-NLI98_RS06930;Parent=gene-NLI98_RS06930;anticodon=(pos:1411075..1411077);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS06930;product=tRNA-Ala NZ_CP100601.1 tRNAscan-SE exon 1411042 1411117 . + . ID=exon-NLI98_RS06930-1;Parent=rna-NLI98_RS06930;anticodon=(pos:1411075..1411077);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS06930;product=tRNA-Ala NZ_CP100601.1 RefSeq gene 1411327 1413498 . + . ID=gene-NLI98_RS06935;Name=NLI98_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06935;old_locus_tag=NLI98_06930 NZ_CP100601.1 Protein Homology CDS 1411327 1413498 . + 0 ID=cds-WP_088497998.1;Parent=gene-NLI98_RS06935;Dbxref=Genbank:WP_088497998.1;Name=WP_088497998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228117.1;locus_tag=NLI98_RS06935;product=EAL domain-containing protein;protein_id=WP_088497998.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1413547 1414749 . - . ID=gene-NLI98_RS06940;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=NLI98_RS06940;old_locus_tag=NLI98_06935 NZ_CP100601.1 Protein Homology CDS 1413547 1414749 . - 0 ID=cds-WP_002913423.1;Parent=gene-NLI98_RS06940;Dbxref=Genbank:WP_002913423.1;Name=WP_002913423.1;gbkey=CDS;gene=nupC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228116.1;locus_tag=NLI98_RS06940;product=nucleoside permease NupC;protein_id=WP_002913423.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1415096 1416337 . + . ID=gene-NLI98_RS06945;Name=NLI98_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06945;old_locus_tag=NLI98_06940 NZ_CP100601.1 Protein Homology CDS 1415096 1416337 . + 0 ID=cds-WP_080882925.1;Parent=gene-NLI98_RS06945;Dbxref=Genbank:WP_080882925.1;Name=WP_080882925.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004174932.1;locus_tag=NLI98_RS06945;product=Nramp family divalent metal transporter;protein_id=WP_080882925.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1416395 1416754 . - . ID=gene-NLI98_RS06950;Name=NLI98_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06950;old_locus_tag=NLI98_06945 NZ_CP100601.1 Protein Homology CDS 1416395 1416754 . - 0 ID=cds-WP_002913419.1;Parent=gene-NLI98_RS06950;Dbxref=Genbank:WP_002913419.1;Name=WP_002913419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228114.1;locus_tag=NLI98_RS06950;product=DUF2502 domain-containing protein;protein_id=WP_002913419.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1416885 1417877 . - . ID=gene-NLI98_RS06955;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=NLI98_RS06955;old_locus_tag=NLI98_06950 NZ_CP100601.1 Protein Homology CDS 1416885 1417877 . - 0 ID=cds-WP_088497996.1;Parent=gene-NLI98_RS06955;Dbxref=Genbank:WP_088497996.1;Name=WP_088497996.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228113.1;locus_tag=NLI98_RS06955;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_088497996.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1418058 1419719 . + . ID=gene-NLI98_RS06960;Name=NLI98_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06960;old_locus_tag=NLI98_06955 NZ_CP100601.1 Protein Homology CDS 1418058 1419719 . + 0 ID=cds-WP_004159719.1;Parent=gene-NLI98_RS06960;Dbxref=Genbank:WP_004159719.1;Name=WP_004159719.1;Ontology_term=GO:0030976;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228112.1;locus_tag=NLI98_RS06960;product=thiamine pyrophosphate-binding protein;protein_id=WP_004159719.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1419716 1420951 . - . ID=gene-NLI98_RS06965;Name=NLI98_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06965;old_locus_tag=NLI98_06960 NZ_CP100601.1 Protein Homology CDS 1419716 1420951 . - 0 ID=cds-WP_032420327.1;Parent=gene-NLI98_RS06965;Dbxref=Genbank:WP_032420327.1;Name=WP_032420327.1;Ontology_term=GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228111.1;locus_tag=NLI98_RS06965;product=ion channel protein;protein_id=WP_032420327.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1421215 1422180 . + . ID=gene-NLI98_RS06970;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=NLI98_RS06970;old_locus_tag=NLI98_06965 NZ_CP100601.1 Protein Homology CDS 1421215 1422180 . + 0 ID=cds-WP_002913377.1;Parent=gene-NLI98_RS06970;Dbxref=Genbank:WP_002913377.1;Name=WP_002913377.1;Ontology_term=GO:0006096,GO:0051156,GO:0004340,GO:0005524,GO:0005536;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA,ATP binding|0005524||IEA,glucose binding|0005536||IEA;go_process=glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228110.1;locus_tag=NLI98_RS06970;product=glucokinase;protein_id=WP_002913377.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1422234 1422971 . - . ID=gene-NLI98_RS06975;Name=NLI98_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06975;old_locus_tag=NLI98_06970 NZ_CP100601.1 Protein Homology CDS 1422234 1422971 . - 0 ID=cds-WP_002913374.1;Parent=gene-NLI98_RS06975;Dbxref=Genbank:WP_002913374.1;Name=WP_002913374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311288.1;locus_tag=NLI98_RS06975;product=LytTR family DNA-binding domain-containing protein;protein_id=WP_002913374.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1422983 1424680 . - . ID=gene-NLI98_RS06980;Name=NLI98_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06980;old_locus_tag=NLI98_06975 NZ_CP100601.1 Protein Homology CDS 1422983 1424680 . - 0 ID=cds-WP_004149230.1;Parent=gene-NLI98_RS06980;Dbxref=Genbank:WP_004149230.1;Name=WP_004149230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540955.1;locus_tag=NLI98_RS06980;product=sensor histidine kinase;protein_id=WP_004149230.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1424679 1424792 . + . ID=gene-NLI98_RS06985;Name=NLI98_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06985;old_locus_tag=NLI98_06980 NZ_CP100601.1 Protein Homology CDS 1424679 1424792 . + 0 ID=cds-WP_004153200.1;Parent=gene-NLI98_RS06985;Dbxref=Genbank:WP_004153200.1;Name=WP_004153200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228107.1;locus_tag=NLI98_RS06985;product=hypothetical protein;protein_id=WP_004153200.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1424789 1424974 . - . ID=gene-NLI98_RS06990;Name=NLI98_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS06990;old_locus_tag=NLI98_06985 NZ_CP100601.1 Protein Homology CDS 1424789 1424974 . - 0 ID=cds-WP_004145585.1;Parent=gene-NLI98_RS06990;Dbxref=Genbank:WP_004145585.1;Name=WP_004145585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228106.1;locus_tag=NLI98_RS06990;product=hypothetical protein;protein_id=WP_004145585.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1425063 1426277 . + . ID=gene-NLI98_RS06995;Name=alaC;gbkey=Gene;gene=alaC;gene_biotype=protein_coding;locus_tag=NLI98_RS06995;old_locus_tag=NLI98_06990 NZ_CP100601.1 Protein Homology CDS 1425063 1426277 . + 0 ID=cds-WP_002913372.1;Parent=gene-NLI98_RS06995;Dbxref=Genbank:WP_002913372.1;Name=WP_002913372.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;gene=alaC;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228105.1;locus_tag=NLI98_RS06995;product=alanine transaminase;protein_id=WP_002913372.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1426348 1426419 . - . ID=gene-NLI98_RS07000;Name=ypdK;gbkey=Gene;gene=ypdK;gene_biotype=protein_coding;locus_tag=NLI98_RS07000;old_locus_tag=NLI98_06995 NZ_CP100601.1 Protein Homology CDS 1426348 1426419 . - 0 ID=cds-WP_099119320.1;Parent=gene-NLI98_RS07000;Dbxref=Genbank:WP_099119320.1;Name=WP_099119320.1;gbkey=CDS;gene=ypdK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_077777854.1;locus_tag=NLI98_RS07000;product=membrane protein YpdK;protein_id=WP_099119320.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1426758 1427954 . - . ID=gene-NLI98_RS07005;Name=NLI98_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07005;old_locus_tag=NLI98_07000 NZ_CP100601.1 Protein Homology CDS 1426758 1427954 . - 0 ID=cds-WP_088497995.1;Parent=gene-NLI98_RS07005;Dbxref=Genbank:WP_088497995.1;Name=WP_088497995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228104.1;locus_tag=NLI98_RS07005;product=CynX/NimT family MFS transporter;protein_id=WP_088497995.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1427951 1428409 . - . ID=gene-NLI98_RS07010;Name=NLI98_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07010;old_locus_tag=NLI98_07005 NZ_CP100601.1 Protein Homology CDS 1427951 1428409 . - 0 ID=cds-WP_060415782.1;Parent=gene-NLI98_RS07010;Dbxref=Genbank:WP_060415782.1;Name=WP_060415782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228103.1;locus_tag=NLI98_RS07010;product=nucleoside deaminase;protein_id=WP_060415782.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1428542 1429450 . + . ID=gene-NLI98_RS07015;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=NLI98_RS07015;old_locus_tag=NLI98_07010 NZ_CP100601.1 Protein Homology CDS 1428542 1429450 . + 0 ID=cds-WP_088497994.1;Parent=gene-NLI98_RS07015;Dbxref=Genbank:WP_088497994.1;Name=WP_088497994.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228102.1;locus_tag=NLI98_RS07015;product=transcriptional regulator CynR;protein_id=WP_088497994.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1429460 1430341 . - . ID=gene-NLI98_RS07020;Name=NLI98_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07020;old_locus_tag=NLI98_07015 NZ_CP100601.1 Protein Homology CDS 1429460 1430341 . - 0 ID=cds-WP_088497993.1;Parent=gene-NLI98_RS07020;Dbxref=Genbank:WP_088497993.1;Name=WP_088497993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228101.1;locus_tag=NLI98_RS07020;product=hypothetical protein;protein_id=WP_088497993.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1430709 1431191 . - . ID=gene-NLI98_RS07025;Name=NLI98_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07025;old_locus_tag=NLI98_07020 NZ_CP100601.1 Protein Homology CDS 1430709 1431191 . - 0 ID=cds-WP_004174945.1;Parent=gene-NLI98_RS07025;Dbxref=Genbank:WP_004174945.1;Name=WP_004174945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228100.1;locus_tag=NLI98_RS07025;product=WbuC family cupin fold metalloprotein;protein_id=WP_004174945.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1431440 1431514 . - . ID=gene-NLI98_RS07030;Name=NLI98_RS07030;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS07030;old_locus_tag=NLI98_07025 NZ_CP100601.1 tRNAscan-SE tRNA 1431440 1431514 . - . ID=rna-NLI98_RS07030;Parent=gene-NLI98_RS07030;anticodon=(pos:complement(1431479..1431481));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS07030;product=tRNA-Arg NZ_CP100601.1 tRNAscan-SE exon 1431440 1431514 . - . ID=exon-NLI98_RS07030-1;Parent=rna-NLI98_RS07030;anticodon=(pos:complement(1431479..1431481));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS07030;product=tRNA-Arg NZ_CP100601.1 RefSeq gene 1431604 1432533 . - . ID=gene-NLI98_RS07035;Name=NLI98_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07035;old_locus_tag=NLI98_07030 NZ_CP100601.1 Protein Homology CDS 1431604 1432533 . - 0 ID=cds-WP_088497992.1;Parent=gene-NLI98_RS07035;Dbxref=Genbank:WP_088497992.1;Name=WP_088497992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004899603.1;locus_tag=NLI98_RS07035;product=formate/nitrite transporter family protein;protein_id=WP_088497992.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1432823 1433584 . + . ID=gene-NLI98_RS07040;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=NLI98_RS07040;old_locus_tag=NLI98_07035 NZ_CP100601.1 Protein Homology CDS 1432823 1433584 . + 0 ID=cds-WP_002913362.1;Parent=gene-NLI98_RS07040;Dbxref=Genbank:WP_002913362.1;Name=WP_002913362.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228097.1;locus_tag=NLI98_RS07040;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_002913362.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1433646 1434968 . - . ID=gene-NLI98_RS07045;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=NLI98_RS07045;old_locus_tag=NLI98_07040 NZ_CP100601.1 Protein Homology CDS 1433646 1434968 . - 0 ID=cds-WP_002913360.1;Parent=gene-NLI98_RS07045;Dbxref=Genbank:WP_002913360.1;Name=WP_002913360.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001766332.1;locus_tag=NLI98_RS07045;product=long-chain fatty acid transporter FadL;protein_id=WP_002913360.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1435342 1435626 . + . ID=gene-NLI98_RS07050;Name=NLI98_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07050;old_locus_tag=NLI98_07045 NZ_CP100601.1 Protein Homology CDS 1435342 1435626 . + 0 ID=cds-WP_002913359.1;Parent=gene-NLI98_RS07050;Dbxref=Genbank:WP_002913359.1;Name=WP_002913359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228094.1;locus_tag=NLI98_RS07050;product=YfcZ/YiiS family protein;protein_id=WP_002913359.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1435786 1437096 . + . ID=gene-NLI98_RS07055;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=NLI98_RS07055;old_locus_tag=NLI98_07050 NZ_CP100601.1 Protein Homology CDS 1435786 1437096 . + 0 ID=cds-WP_088497991.1;Parent=gene-NLI98_RS07055;Dbxref=Genbank:WP_088497991.1;Name=WP_088497991.1;Ontology_term=GO:0009062,GO:0003988;gbkey=CDS;gene=fadI;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228093.1;locus_tag=NLI98_RS07055;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_088497991.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1437096 1439240 . + . ID=gene-NLI98_RS07060;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=NLI98_RS07060;old_locus_tag=NLI98_07055 NZ_CP100601.1 Protein Homology CDS 1437096 1439240 . + 0 ID=cds-WP_088497990.1;Parent=gene-NLI98_RS07060;Dbxref=Genbank:WP_088497990.1;Name=WP_088497990.1;Ontology_term=GO:0006635,GO:0003857,GO:0008692,GO:0016491,GO:0051287;gbkey=CDS;gene=fadJ;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=fatty acid beta-oxidation|0006635||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228092.1;locus_tag=NLI98_RS07060;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_088497990.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1439450 1439935 . + . ID=gene-NLI98_RS07065;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=NLI98_RS07065;old_locus_tag=NLI98_07060 NZ_CP100601.1 Protein Homology CDS 1439450 1439935 . + 0 ID=cds-WP_002913355.1;Parent=gene-NLI98_RS07065;Dbxref=Genbank:WP_002913355.1;Name=WP_002913355.1;Ontology_term=GO:0000160,GO:0101006;gbkey=CDS;gene=sixA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461329.1;locus_tag=NLI98_RS07065;product=phosphohistidine phosphatase SixA;protein_id=WP_002913355.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1439956 1440507 . - . ID=gene-NLI98_RS07070;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=NLI98_RS07070;old_locus_tag=NLI98_07065 NZ_CP100601.1 Protein Homology CDS 1439956 1440507 . - 0 ID=cds-WP_002913348.1;Parent=gene-NLI98_RS07070;Dbxref=Genbank:WP_002913348.1;Name=WP_002913348.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017899504.1;locus_tag=NLI98_RS07070;product=endonuclease SmrB;protein_id=WP_002913348.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1440675 1441607 . + . ID=gene-NLI98_RS07075;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=NLI98_RS07075;old_locus_tag=NLI98_07070 NZ_CP100601.1 Protein Homology CDS 1440675 1441607 . + 0 ID=cds-WP_002913346.1;Parent=gene-NLI98_RS07075;Dbxref=Genbank:WP_002913346.1;Name=WP_002913346.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129736.1;locus_tag=NLI98_RS07075;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_002913346.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1441649 1442734 . + . ID=gene-NLI98_RS07080;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=NLI98_RS07080;old_locus_tag=NLI98_07075 NZ_CP100601.1 Protein Homology CDS 1441649 1442734 . + 0 ID=cds-WP_002913342.1;Parent=gene-NLI98_RS07080;Dbxref=Genbank:WP_002913342.1;Name=WP_002913342.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129642.1;locus_tag=NLI98_RS07080;product=chorismate synthase;protein_id=WP_002913342.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1442737 1443561 . + . ID=gene-NLI98_RS07085;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=NLI98_RS07085;old_locus_tag=NLI98_07080 NZ_CP100601.1 Protein Homology CDS 1442737 1443561 . + 0 ID=cds-WP_004174960.1;Parent=gene-NLI98_RS07085;Dbxref=Genbank:WP_004174960.1;Name=WP_004174960.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228087.1;locus_tag=NLI98_RS07085;product=penicillin-insensitive murein endopeptidase;protein_id=WP_004174960.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1443561 1444370 . + . ID=gene-NLI98_RS07090;Name=NLI98_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07090;old_locus_tag=NLI98_07085 NZ_CP100601.1 Protein Homology CDS 1443561 1444370 . + 0 ID=cds-WP_002913340.1;Parent=gene-NLI98_RS07090;Dbxref=Genbank:WP_002913340.1;Name=WP_002913340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228086.1;locus_tag=NLI98_RS07090;product=sulfite exporter TauE/SafE family protein;protein_id=WP_002913340.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1444370 1444918 . + . ID=gene-NLI98_RS07095;Name=NLI98_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07095;old_locus_tag=NLI98_07090 NZ_CP100601.1 Protein Homology CDS 1444370 1444918 . + 0 ID=cds-WP_004185005.1;Parent=gene-NLI98_RS07095;Dbxref=Genbank:WP_004185005.1;Name=WP_004185005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228085.1;locus_tag=NLI98_RS07095;product=elongation factor P hydroxylase;protein_id=WP_004185005.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1444950 1445231 . + . ID=gene-NLI98_RS07100;Name=NLI98_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07100;old_locus_tag=NLI98_07095 NZ_CP100601.1 Protein Homology CDS 1444950 1445231 . + 0 ID=cds-WP_002913338.1;Parent=gene-NLI98_RS07100;Dbxref=Genbank:WP_002913338.1;Name=WP_002913338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228084.1;locus_tag=NLI98_RS07100;product=YfcL family protein;protein_id=WP_002913338.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1445293 1447281 . - . ID=gene-NLI98_RS07105;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=NLI98_RS07105;old_locus_tag=NLI98_07100 NZ_CP100601.1 Protein Homology CDS 1445293 1447281 . - 0 ID=cds-WP_088497997.1;Parent=gene-NLI98_RS07105;Dbxref=Genbank:WP_088497997.1;Name=WP_088497997.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228083.1;locus_tag=NLI98_RS07105;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_088497997.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1447440 1448660 . + . ID=gene-NLI98_RS07110;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=NLI98_RS07110;old_locus_tag=NLI98_07105 NZ_CP100601.1 Protein Homology CDS 1447440 1448660 . + 0 ID=cds-WP_002913291.1;Parent=gene-NLI98_RS07110;Dbxref=Genbank:WP_002913291.1;Name=WP_002913291.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228082.1;locus_tag=NLI98_RS07110;product=beta-ketoacyl-ACP synthase I;protein_id=WP_002913291.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1448868 1450043 . + . ID=gene-NLI98_RS07115;Name=NLI98_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07115;old_locus_tag=NLI98_07110 NZ_CP100601.1 Protein Homology CDS 1448868 1450043 . + 0 ID=cds-WP_004149211.1;Parent=gene-NLI98_RS07115;Dbxref=Genbank:WP_004149211.1;Name=WP_004149211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228081.1;locus_tag=NLI98_RS07115;product=MFS transporter;protein_id=WP_004149211.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1450130 1451107 . - . ID=gene-NLI98_RS07120;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=NLI98_RS07120;old_locus_tag=NLI98_07115 NZ_CP100601.1 Protein Homology CDS 1450130 1451107 . - 0 ID=cds-WP_021313698.1;Parent=gene-NLI98_RS07120;Dbxref=Genbank:WP_021313698.1;Name=WP_021313698.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;gene=flk;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004149210.1;locus_tag=NLI98_RS07120;product=flagella biosynthesis regulator Flk;protein_id=WP_021313698.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1451218 1452354 . + . ID=gene-NLI98_RS07125;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=NLI98_RS07125;old_locus_tag=NLI98_07120 NZ_CP100601.1 Protein Homology CDS 1451218 1452354 . + 0 ID=cds-WP_088497989.1;Parent=gene-NLI98_RS07125;Dbxref=Genbank:WP_088497989.1;Name=WP_088497989.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228079.1;locus_tag=NLI98_RS07125;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_088497989.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1452418 1453431 . + . ID=gene-NLI98_RS07130;Name=NLI98_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07130;old_locus_tag=NLI98_07125 NZ_CP100601.1 Protein Homology CDS 1452418 1453431 . + 0 ID=cds-WP_002913227.1;Parent=gene-NLI98_RS07130;Dbxref=Genbank:WP_002913227.1;Name=WP_002913227.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228078.1;locus_tag=NLI98_RS07130;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_002913227.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1453431 1454243 . + . ID=gene-NLI98_RS07135;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=NLI98_RS07135;old_locus_tag=NLI98_07130 NZ_CP100601.1 Protein Homology CDS 1453431 1454243 . + 0 ID=cds-WP_088497988.1;Parent=gene-NLI98_RS07135;Dbxref=Genbank:WP_088497988.1;Name=WP_088497988.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228077.1;locus_tag=NLI98_RS07135;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_088497988.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1454270 1454929 . + . ID=gene-NLI98_RS07140;Name=NLI98_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07140;old_locus_tag=NLI98_07135 NZ_CP100601.1 Protein Homology CDS 1454270 1454929 . + 0 ID=cds-WP_002913221.1;Parent=gene-NLI98_RS07140;Dbxref=Genbank:WP_002913221.1;Name=WP_002913221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228076.1;locus_tag=NLI98_RS07140;product=DedA family protein;protein_id=WP_002913221.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1455115 1456035 . + . ID=gene-NLI98_RS07145;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=NLI98_RS07145;old_locus_tag=NLI98_07140 NZ_CP100601.1 Protein Homology CDS 1455115 1456035 . + 0 ID=cds-WP_088497987.1;Parent=gene-NLI98_RS07145;Dbxref=Genbank:WP_088497987.1;Name=WP_088497987.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228075.1;locus_tag=NLI98_RS07145;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_088497987.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1456111 1457379 . + . ID=gene-NLI98_RS07150;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=NLI98_RS07150;old_locus_tag=NLI98_07145 NZ_CP100601.1 Protein Homology CDS 1456111 1457379 . + 0 ID=cds-WP_002913219.1;Parent=gene-NLI98_RS07150;Dbxref=Genbank:WP_002913219.1;Name=WP_002913219.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228074.1;locus_tag=NLI98_RS07150;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_002913219.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1457369 1458058 . + . ID=gene-NLI98_RS07155;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=NLI98_RS07155;old_locus_tag=NLI98_07150 NZ_CP100601.1 Protein Homology CDS 1457369 1458058 . + 0 ID=cds-WP_004214089.1;Parent=gene-NLI98_RS07155;Dbxref=Genbank:WP_004214089.1;Name=WP_004214089.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151102.1;locus_tag=NLI98_RS07155;product=cell division protein DedD;protein_id=WP_004214089.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1458275 1458763 . + . ID=gene-NLI98_RS07160;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=NLI98_RS07160;old_locus_tag=NLI98_07155 NZ_CP100601.1 Protein Homology CDS 1458275 1458763 . + 0 ID=cds-WP_002913214.1;Parent=gene-NLI98_RS07160;Dbxref=Genbank:WP_002913214.1;Name=WP_002913214.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228072.1;locus_tag=NLI98_RS07160;product=colicin V production protein;protein_id=WP_002913214.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1458797 1460314 . + . ID=gene-NLI98_RS07165;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=NLI98_RS07165;old_locus_tag=NLI98_07160 NZ_CP100601.1 Protein Homology CDS 1458797 1460314 . + 0 ID=cds-WP_002913213.1;Parent=gene-NLI98_RS07165;Dbxref=Genbank:WP_002913213.1;Name=WP_002913213.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=NLI98_RS07165;product=amidophosphoribosyltransferase;protein_id=WP_002913213.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1460450 1461019 . + . ID=gene-NLI98_RS07170;Name=NLI98_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07170;old_locus_tag=NLI98_07165 NZ_CP100601.1 Protein Homology CDS 1460450 1461019 . + 0 ID=cds-WP_002913212.1;Parent=gene-NLI98_RS07170;Dbxref=Genbank:WP_002913212.1;Name=WP_002913212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228070.1;locus_tag=NLI98_RS07170;product=UbiX family flavin prenyltransferase;protein_id=WP_002913212.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1461100 1461261 . - . ID=gene-NLI98_RS07175;Name=NLI98_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07175;old_locus_tag=NLI98_07170 NZ_CP100601.1 Protein Homology CDS 1461100 1461261 . - 0 ID=cds-WP_040173472.1;Parent=gene-NLI98_RS07175;Dbxref=Genbank:WP_040173472.1;Name=WP_040173472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228069.1;locus_tag=NLI98_RS07175;product=hypothetical protein;protein_id=WP_040173472.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1461302 1462084 . + . ID=gene-NLI98_RS07180;Name=argT;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=NLI98_RS07180;old_locus_tag=NLI98_07175 NZ_CP100601.1 Protein Homology CDS 1461302 1462084 . + 0 ID=cds-WP_002913210.1;Parent=gene-NLI98_RS07180;Dbxref=Genbank:WP_002913210.1;Name=WP_002913210.1;gbkey=CDS;gene=argT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228068.1;locus_tag=NLI98_RS07180;product=lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT;protein_id=WP_002913210.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1462352 1463134 . + . ID=gene-NLI98_RS07185;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=NLI98_RS07185;old_locus_tag=NLI98_07180 NZ_CP100601.1 Protein Homology CDS 1462352 1463134 . + 0 ID=cds-WP_088497986.1;Parent=gene-NLI98_RS07185;Dbxref=Genbank:WP_088497986.1;Name=WP_088497986.1;gbkey=CDS;gene=hisJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228067.1;locus_tag=NLI98_RS07185;product=histidine ABC transporter substrate-binding protein HisJ;protein_id=WP_088497986.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1463199 1463885 . + . ID=gene-NLI98_RS07190;Name=NLI98_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07190;old_locus_tag=NLI98_07185 NZ_CP100601.1 Protein Homology CDS 1463199 1463885 . + 0 ID=cds-WP_002913208.1;Parent=gene-NLI98_RS07190;Dbxref=Genbank:WP_002913208.1;Name=WP_002913208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012124147.1;locus_tag=NLI98_RS07190;product=histidine ABC transporter permease HisQ;protein_id=WP_002913208.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1463882 1464598 . + . ID=gene-NLI98_RS07195;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=NLI98_RS07195;old_locus_tag=NLI98_07190 NZ_CP100601.1 Protein Homology CDS 1463882 1464598 . + 0 ID=cds-WP_088497985.1;Parent=gene-NLI98_RS07195;Dbxref=Genbank:WP_088497985.1;Name=WP_088497985.1;gbkey=CDS;gene=hisM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228065.1;locus_tag=NLI98_RS07195;product=histidine ABC transporter permease HisM;protein_id=WP_088497985.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1464606 1465379 . + . ID=gene-NLI98_RS07200;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=NLI98_RS07200;old_locus_tag=NLI98_07195 NZ_CP100601.1 Protein Homology CDS 1464606 1465379 . + 0 ID=cds-WP_002913206.1;Parent=gene-NLI98_RS07200;Dbxref=Genbank:WP_002913206.1;Name=WP_002913206.1;gbkey=CDS;gene=hisP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228064.1;locus_tag=NLI98_RS07200;product=histidine ABC transporter ATP-binding protein HisP;protein_id=WP_002913206.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1465385 1465912 . - . ID=gene-NLI98_RS07205;Name=NLI98_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07205;old_locus_tag=NLI98_07200 NZ_CP100601.1 Protein Homology CDS 1465385 1465912 . - 0 ID=cds-WP_088497984.1;Parent=gene-NLI98_RS07205;Dbxref=Genbank:WP_088497984.1;Name=WP_088497984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228063.1;locus_tag=NLI98_RS07205;product=GNAT family N-acetyltransferase;protein_id=WP_088497984.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1466032 1466148 . + . ID=gene-NLI98_RS07210;Name=NLI98_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07210;old_locus_tag=NLI98_07205 NZ_CP100601.1 Protein Homology CDS 1466032 1466148 . + 0 ID=cds-WP_004217247.1;Parent=gene-NLI98_RS07210;Dbxref=Genbank:WP_004217247.1;Name=WP_004217247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228062.1;locus_tag=NLI98_RS07210;product=hypothetical protein;protein_id=WP_004217247.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1466128 1467021 . - . ID=gene-NLI98_RS07215;Name=NLI98_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07215;old_locus_tag=NLI98_07210 NZ_CP100601.1 Protein Homology CDS 1466128 1467021 . - 0 ID=cds-WP_002913203.1;Parent=gene-NLI98_RS07215;Dbxref=Genbank:WP_002913203.1;Name=WP_002913203.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228061.1;locus_tag=NLI98_RS07215;product=TIGR01777 family oxidoreductase;protein_id=WP_002913203.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1467040 1467402 . - . ID=gene-NLI98_RS07220;Name=folX;gbkey=Gene;gene=folX;gene_biotype=protein_coding;locus_tag=NLI98_RS07220;old_locus_tag=NLI98_07215 NZ_CP100601.1 Protein Homology CDS 1467040 1467402 . - 0 ID=cds-WP_002913200.1;Parent=gene-NLI98_RS07220;Dbxref=Genbank:WP_002913200.1;Name=WP_002913200.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folX;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228060.1;locus_tag=NLI98_RS07220;product=dihydroneopterin triphosphate 2'-epimerase;protein_id=WP_002913200.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1467468 1468097 . - . ID=gene-NLI98_RS07225;Name=yfcG;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=NLI98_RS07225;old_locus_tag=NLI98_07220 NZ_CP100601.1 Protein Homology CDS 1467468 1468097 . - 0 ID=cds-WP_088497983.1;Parent=gene-NLI98_RS07225;Dbxref=Genbank:WP_088497983.1;Name=WP_088497983.1;gbkey=CDS;gene=yfcG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228059.1;locus_tag=NLI98_RS07225;product=GSH-dependent disulfide bond oxidoreductase;protein_id=WP_088497983.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1468278 1468916 . + . ID=gene-NLI98_RS07230;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=NLI98_RS07230;old_locus_tag=NLI98_07225 NZ_CP100601.1 Protein Homology CDS 1468278 1468916 . + 0 ID=cds-WP_004174989.1;Parent=gene-NLI98_RS07230;Dbxref=Genbank:WP_004174989.1;Name=WP_004174989.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228058.1;locus_tag=NLI98_RS07230;product=glutathione transferase;protein_id=WP_004174989.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1468979 1469530 . + . ID=gene-NLI98_RS07235;Name=yfcE;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=NLI98_RS07235;old_locus_tag=NLI98_07230 NZ_CP100601.1 Protein Homology CDS 1468979 1469530 . + 0 ID=cds-WP_088497982.1;Parent=gene-NLI98_RS07235;Dbxref=Genbank:WP_088497982.1;Name=WP_088497982.1;gbkey=CDS;gene=yfcE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228057.1;locus_tag=NLI98_RS07235;product=phosphodiesterase;protein_id=WP_088497982.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1469588 1470139 . + . ID=gene-NLI98_RS07240;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=NLI98_RS07240;old_locus_tag=NLI98_07235 NZ_CP100601.1 Protein Homology CDS 1469588 1470139 . + 0 ID=cds-WP_002913197.1;Parent=gene-NLI98_RS07240;Dbxref=Genbank:WP_002913197.1;Name=WP_002913197.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228056.1;locus_tag=NLI98_RS07240;product=NUDIX hydrolase YfcD;protein_id=WP_002913197.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1470232 1472379 . - . ID=gene-NLI98_RS07245;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=NLI98_RS07245;old_locus_tag=NLI98_07240 NZ_CP100601.1 Protein Homology CDS 1470232 1472379 . - 0 ID=cds-WP_002913196.1;Parent=gene-NLI98_RS07245;Dbxref=Genbank:WP_002913196.1;Name=WP_002913196.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228055.1;locus_tag=NLI98_RS07245;product=phosphate acetyltransferase;protein_id=WP_002913196.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1472580 1473782 . - . ID=gene-NLI98_RS07250;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=NLI98_RS07250;old_locus_tag=NLI98_07245 NZ_CP100601.1 Protein Homology CDS 1472580 1473782 . - 0 ID=cds-WP_002913195.1;Parent=gene-NLI98_RS07250;Dbxref=Genbank:WP_002913195.1;Name=WP_002913195.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=NLI98_RS07250;product=acetate kinase;protein_id=WP_002913195.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1474120 1474575 . + . ID=gene-NLI98_RS07255;Name=NLI98_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07255;old_locus_tag=NLI98_07250 NZ_CP100601.1 Protein Homology CDS 1474120 1474575 . + 0 ID=cds-WP_002913194.1;Parent=gene-NLI98_RS07255;Dbxref=Genbank:WP_002913194.1;Name=WP_002913194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228053.1;locus_tag=NLI98_RS07255;product=DUF412 domain-containing protein;protein_id=WP_002913194.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1474663 1475157 . + . ID=gene-NLI98_RS07260;Name=NLI98_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07260;old_locus_tag=NLI98_07255 NZ_CP100601.1 Protein Homology CDS 1474663 1475157 . + 0 ID=cds-WP_002913193.1;Parent=gene-NLI98_RS07260;Dbxref=Genbank:WP_002913193.1;Name=WP_002913193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007371080.1;locus_tag=NLI98_RS07260;product=YfbU family protein;protein_id=WP_002913193.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1475169 1475828 . + . ID=gene-NLI98_RS07265;Name=NLI98_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07265;old_locus_tag=NLI98_07260 NZ_CP100601.1 Protein Homology CDS 1475169 1475828 . + 0 ID=cds-WP_088497981.1;Parent=gene-NLI98_RS07265;Dbxref=Genbank:WP_088497981.1;Name=WP_088497981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228051.1;locus_tag=NLI98_RS07265;product=sugar phosphatase;protein_id=WP_088497981.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1475905 1477737 . + . ID=gene-NLI98_RS07270;Name=NLI98_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07270;old_locus_tag=NLI98_07265 NZ_CP100601.1 Protein Homology CDS 1475905 1477737 . + 0 ID=cds-WP_009484760.1;Parent=gene-NLI98_RS07270;Dbxref=Genbank:WP_009484760.1;Name=WP_009484760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228050.1;locus_tag=NLI98_RS07270;product=SLC13 family permease;protein_id=WP_009484760.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1477782 1478381 . - . ID=gene-NLI98_RS07275;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=NLI98_RS07275;old_locus_tag=NLI98_07270 NZ_CP100601.1 Protein Homology CDS 1477782 1478381 . - 0 ID=cds-WP_002913188.1;Parent=gene-NLI98_RS07275;Dbxref=Genbank:WP_002913188.1;Name=WP_002913188.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228049.1;locus_tag=NLI98_RS07275;product=5'-deoxynucleotidase;protein_id=WP_002913188.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1478463 1479680 . - . ID=gene-NLI98_RS07280;Name=alaA;gbkey=Gene;gene=alaA;gene_biotype=protein_coding;locus_tag=NLI98_RS07280;old_locus_tag=NLI98_07275 NZ_CP100601.1 Protein Homology CDS 1478463 1479680 . - 0 ID=cds-WP_002913185.1;Parent=gene-NLI98_RS07280;Dbxref=Genbank:WP_002913185.1;Name=WP_002913185.1;gbkey=CDS;gene=alaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228048.1;locus_tag=NLI98_RS07280;product=alanine transaminase AlaA;protein_id=WP_002913185.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1480553 1481479 . + . ID=gene-NLI98_RS07285;Name=NLI98_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07285;old_locus_tag=NLI98_07280 NZ_CP100601.1 Protein Homology CDS 1480553 1481479 . + 0 ID=cds-WP_002913183.1;Parent=gene-NLI98_RS07285;Dbxref=Genbank:WP_002913183.1;Name=WP_002913183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228047.1;locus_tag=NLI98_RS07285;product=LysR family transcriptional regulator;protein_id=WP_002913183.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1482131 1482577 . + . ID=gene-NLI98_RS07290;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=NLI98_RS07290;old_locus_tag=NLI98_07285 NZ_CP100601.1 Protein Homology CDS 1482131 1482577 . + 0 ID=cds-WP_002913181.1;Parent=gene-NLI98_RS07290;Dbxref=Genbank:WP_002913181.1;Name=WP_002913181.1;gbkey=CDS;gene=nuoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002913181.1;locus_tag=NLI98_RS07290;product=NADH-quinone oxidoreductase subunit NuoA;protein_id=WP_002913181.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1482593 1483267 . + . ID=gene-NLI98_RS07295;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=NLI98_RS07295;old_locus_tag=NLI98_07290 NZ_CP100601.1 Protein Homology CDS 1482593 1483267 . + 0 ID=cds-WP_002913178.1;Parent=gene-NLI98_RS07295;Dbxref=Genbank:WP_002913178.1;Name=WP_002913178.1;gbkey=CDS;gene=nuoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228044.1;locus_tag=NLI98_RS07295;product=NADH-quinone oxidoreductase subunit NuoB;protein_id=WP_002913178.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1483354 1485162 . + . ID=gene-NLI98_RS07300;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=NLI98_RS07300;old_locus_tag=NLI98_07295 NZ_CP100601.1 Protein Homology CDS 1483354 1485162 . + 0 ID=cds-WP_002913162.1;Parent=gene-NLI98_RS07300;Dbxref=Genbank:WP_002913162.1;Name=WP_002913162.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228043.1;locus_tag=NLI98_RS07300;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_002913162.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1485165 1485665 . + . ID=gene-NLI98_RS07305;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=NLI98_RS07305;old_locus_tag=NLI98_07300 NZ_CP100601.1 Protein Homology CDS 1485165 1485665 . + 0 ID=cds-WP_002913160.1;Parent=gene-NLI98_RS07305;Dbxref=Genbank:WP_002913160.1;Name=WP_002913160.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228042.1;locus_tag=NLI98_RS07305;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_002913160.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1485662 1486999 . + . ID=gene-NLI98_RS07310;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=NLI98_RS07310;old_locus_tag=NLI98_07305 NZ_CP100601.1 Protein Homology CDS 1485662 1486999 . + 0 ID=cds-WP_002913158.1;Parent=gene-NLI98_RS07310;Dbxref=Genbank:WP_002913158.1;Name=WP_002913158.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228041.1;locus_tag=NLI98_RS07310;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_002913158.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1487032 1489758 . + . ID=gene-NLI98_RS07315;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=NLI98_RS07315;old_locus_tag=NLI98_07310 NZ_CP100601.1 Protein Homology CDS 1487032 1489758 . + 0 ID=cds-WP_004149179.1;Parent=gene-NLI98_RS07315;Dbxref=Genbank:WP_004149179.1;Name=WP_004149179.1;Ontology_term=GO:0006120,GO:0050136;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017899275.1;locus_tag=NLI98_RS07315;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_004149179.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1489755 1490732 . + . ID=gene-NLI98_RS07320;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=NLI98_RS07320;old_locus_tag=NLI98_07315 NZ_CP100601.1 Protein Homology CDS 1489755 1490732 . + 0 ID=cds-WP_002913156.1;Parent=gene-NLI98_RS07320;Dbxref=Genbank:WP_002913156.1;Name=WP_002913156.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=NLI98_RS07320;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_002913156.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1490747 1491289 . + . ID=gene-NLI98_RS07325;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=NLI98_RS07325;old_locus_tag=NLI98_07320 NZ_CP100601.1 Protein Homology CDS 1490747 1491289 . + 0 ID=cds-WP_002913152.1;Parent=gene-NLI98_RS07325;Dbxref=Genbank:WP_002913152.1;Name=WP_002913152.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=NLI98_RS07325;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_002913152.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1491301 1491855 . + . ID=gene-NLI98_RS07330;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=NLI98_RS07330;old_locus_tag=NLI98_07325 NZ_CP100601.1 Protein Homology CDS 1491301 1491855 . + 0 ID=cds-WP_002913150.1;Parent=gene-NLI98_RS07330;Dbxref=Genbank:WP_002913150.1;Name=WP_002913150.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228037.1;locus_tag=NLI98_RS07330;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_002913150.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1491852 1492154 . + . ID=gene-NLI98_RS07335;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=NLI98_RS07335;old_locus_tag=NLI98_07330 NZ_CP100601.1 Protein Homology CDS 1491852 1492154 . + 0 ID=cds-WP_002913148.1;Parent=gene-NLI98_RS07335;Dbxref=Genbank:WP_002913148.1;Name=WP_002913148.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=NLI98_RS07335;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_002913148.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1492151 1493992 . + . ID=gene-NLI98_RS07340;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=NLI98_RS07340;old_locus_tag=NLI98_07335 NZ_CP100601.1 Protein Homology CDS 1492151 1493992 . + 0 ID=cds-WP_004151106.1;Parent=gene-NLI98_RS07340;Dbxref=Genbank:WP_004151106.1;Name=WP_004151106.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129466.1;locus_tag=NLI98_RS07340;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_004151106.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1494162 1495691 . + . ID=gene-NLI98_RS07345;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=NLI98_RS07345;old_locus_tag=NLI98_07340 NZ_CP100601.1 Protein Homology CDS 1494162 1495691 . + 0 ID=cds-WP_004214591.1;Parent=gene-NLI98_RS07345;Dbxref=Genbank:WP_004214591.1;Name=WP_004214591.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129465.1;locus_tag=NLI98_RS07345;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_004214591.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1495698 1497155 . + . ID=gene-NLI98_RS07350;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=NLI98_RS07350;old_locus_tag=NLI98_07345 NZ_CP100601.1 Protein Homology CDS 1495698 1497155 . + 0 ID=cds-WP_004151107.1;Parent=gene-NLI98_RS07350;Dbxref=Genbank:WP_004151107.1;Name=WP_004151107.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228033.1;locus_tag=NLI98_RS07350;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_004151107.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1497210 1498130 . - . ID=gene-NLI98_RS07355;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=NLI98_RS07355;old_locus_tag=NLI98_07350 NZ_CP100601.1 Protein Homology CDS 1497210 1498130 . - 0 ID=cds-WP_088497979.1;Parent=gene-NLI98_RS07355;Dbxref=Genbank:WP_088497979.1;Name=WP_088497979.1;Ontology_term=GO:0042779,GO:0016891;gbkey=CDS;gene=rnz;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-trailer cleavage|0042779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228032.1;locus_tag=NLI98_RS07355;product=ribonuclease Z;protein_id=WP_088497979.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1498188 1498649 . + . ID=gene-NLI98_RS07360;Name=NLI98_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07360;old_locus_tag=NLI98_07355 NZ_CP100601.1 Protein Homology CDS 1498188 1498649 . + 0 ID=cds-WP_004890627.1;Parent=gene-NLI98_RS07360;Dbxref=Genbank:WP_004890627.1;Name=WP_004890627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228031.1;locus_tag=NLI98_RS07360;product=GNAT family N-acetyltransferase;protein_id=WP_004890627.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1498785 1500074 . + . ID=gene-NLI98_RS07365;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=NLI98_RS07365;old_locus_tag=NLI98_07360 NZ_CP100601.1 Protein Homology CDS 1498785 1500074 . + 0 ID=cds-WP_088497978.1;Parent=gene-NLI98_RS07365;Dbxref=Genbank:WP_088497978.1;Name=WP_088497978.1;Ontology_term=GO:0008909;gbkey=CDS;gene=menF;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228030.1;locus_tag=NLI98_RS07365;product=isochorismate synthase MenF;protein_id=WP_088497978.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1500157 1501827 . + . ID=gene-NLI98_RS07370;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=NLI98_RS07370;old_locus_tag=NLI98_07365 NZ_CP100601.1 Protein Homology CDS 1500157 1501827 . + 0 ID=cds-WP_004214600.1;Parent=gene-NLI98_RS07370;Dbxref=Genbank:WP_004214600.1;Name=WP_004214600.1;Ontology_term=GO:0009234,GO:0070204;gbkey=CDS;gene=menD;go_function=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228029.1;locus_tag=NLI98_RS07370;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_004214600.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1501824 1502582 . + . ID=gene-NLI98_RS07375;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=NLI98_RS07375;old_locus_tag=NLI98_07370 NZ_CP100601.1 Protein Homology CDS 1501824 1502582 . + 0 ID=cds-WP_023316079.1;Parent=gene-NLI98_RS07375;Dbxref=Genbank:WP_023316079.1;Name=WP_023316079.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228028.1;locus_tag=NLI98_RS07375;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_023316079.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1502597 1503454 . + . ID=gene-NLI98_RS07380;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=NLI98_RS07380;old_locus_tag=NLI98_07375 NZ_CP100601.1 Protein Homology CDS 1502597 1503454 . + 0 ID=cds-WP_002913098.1;Parent=gene-NLI98_RS07380;Dbxref=Genbank:WP_002913098.1;Name=WP_002913098.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228027.1;locus_tag=NLI98_RS07380;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_002913098.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1503454 1504419 . + . ID=gene-NLI98_RS07385;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=NLI98_RS07385;old_locus_tag=NLI98_07380 NZ_CP100601.1 Protein Homology CDS 1503454 1504419 . + 0 ID=cds-WP_004214603.1;Parent=gene-NLI98_RS07385;Dbxref=Genbank:WP_004214603.1;Name=WP_004214603.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228026.1;locus_tag=NLI98_RS07385;product=o-succinylbenzoate synthase;protein_id=WP_004214603.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1504416 1505792 . + . ID=gene-NLI98_RS07390;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=NLI98_RS07390;old_locus_tag=NLI98_07385 NZ_CP100601.1 Protein Homology CDS 1504416 1505792 . + 0 ID=cds-WP_029602056.1;Parent=gene-NLI98_RS07390;Dbxref=Genbank:WP_029602056.1;Name=WP_029602056.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228025.1;locus_tag=NLI98_RS07390;product=o-succinylbenzoate--CoA ligase;protein_id=WP_029602056.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1505848 1506273 . - . ID=gene-NLI98_RS07395;Name=nudI;gbkey=Gene;gene=nudI;gene_biotype=protein_coding;locus_tag=NLI98_RS07395;old_locus_tag=NLI98_07390 NZ_CP100601.1 Protein Homology CDS 1505848 1506273 . - 0 ID=cds-WP_004214608.1;Parent=gene-NLI98_RS07395;Dbxref=Genbank:WP_004214608.1;Name=WP_004214608.1;Ontology_term=GO:0016818;gbkey=CDS;gene=nudI;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228024.1;locus_tag=NLI98_RS07395;product=nucleoside triphosphatase NudI;protein_id=WP_004214608.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1506411 1507376 . + . ID=gene-NLI98_RS07400;Name=NLI98_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07400;old_locus_tag=NLI98_07395 NZ_CP100601.1 Protein Homology CDS 1506411 1507376 . + 0 ID=cds-WP_094644848.1;Parent=gene-NLI98_RS07400;Dbxref=Genbank:WP_094644848.1;Name=WP_094644848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228023.1;locus_tag=NLI98_RS07400;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_094644848.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1507651 1508193 . + . ID=gene-NLI98_RS07405;Name=NLI98_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07405;old_locus_tag=NLI98_07400 NZ_CP100601.1 Protein Homology CDS 1507651 1508193 . + 0 ID=cds-WP_002913070.1;Parent=gene-NLI98_RS07405;Dbxref=Genbank:WP_002913070.1;Name=WP_002913070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228021.1;locus_tag=NLI98_RS07405;product=YfaZ family outer membrane protein;protein_id=WP_002913070.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1508296 1509492 . + . ID=gene-NLI98_RS07410;Name=NLI98_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07410;old_locus_tag=NLI98_07405 NZ_CP100601.1 Protein Homology CDS 1508296 1509492 . + 0 ID=cds-WP_004184973.1;Parent=gene-NLI98_RS07410;Dbxref=Genbank:WP_004184973.1;Name=WP_004184973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228020.1;locus_tag=NLI98_RS07410;product=nicotinamide mononucleotide deamidase-related protein YfaY;protein_id=WP_004184973.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1509697 1510482 . + . ID=gene-NLI98_RS07415;Name=NLI98_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07415;old_locus_tag=NLI98_07410 NZ_CP100601.1 Protein Homology CDS 1509697 1510482 . + 0 ID=cds-WP_002913046.1;Parent=gene-NLI98_RS07415;Dbxref=Genbank:WP_002913046.1;Name=WP_002913046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228019.1;locus_tag=NLI98_RS07415;product=IclR family transcriptional regulator;protein_id=WP_002913046.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1510493 1511698 . + . ID=gene-NLI98_RS07420;Name=rhmD;gbkey=Gene;gene=rhmD;gene_biotype=protein_coding;locus_tag=NLI98_RS07420;old_locus_tag=NLI98_07415 NZ_CP100601.1 Protein Homology CDS 1510493 1511698 . + 0 ID=cds-WP_088497976.1;Parent=gene-NLI98_RS07420;Dbxref=Genbank:WP_088497976.1;Name=WP_088497976.1;Ontology_term=GO:0050032;gbkey=CDS;gene=rhmD;go_function=L-rhamnonate dehydratase activity|0050032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228018.1;locus_tag=NLI98_RS07420;product=L-rhamnonate dehydratase;protein_id=WP_088497976.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1511741 1513030 . + . ID=gene-NLI98_RS07425;Name=NLI98_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07425;old_locus_tag=NLI98_07420 NZ_CP100601.1 Protein Homology CDS 1511741 1513030 . + 0 ID=cds-WP_088497975.1;Parent=gene-NLI98_RS07425;Dbxref=Genbank:WP_088497975.1;Name=WP_088497975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228017.1;locus_tag=NLI98_RS07425;product=MFS transporter;protein_id=WP_088497975.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1513045 1513848 . + . ID=gene-NLI98_RS07430;Name=yfaU;gbkey=Gene;gene=yfaU;gene_biotype=protein_coding;locus_tag=NLI98_RS07430;old_locus_tag=NLI98_07425 NZ_CP100601.1 Protein Homology CDS 1513045 1513848 . + 0 ID=cds-WP_002913043.1;Parent=gene-NLI98_RS07430;Dbxref=Genbank:WP_002913043.1;Name=WP_002913043.1;gbkey=CDS;gene=yfaU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228016.1;locus_tag=NLI98_RS07430;product=2-keto-3-deoxy-L-rhamnonate aldolase;protein_id=WP_002913043.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1513870 1515048 . - . ID=gene-NLI98_RS07435;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=NLI98_RS07435;old_locus_tag=NLI98_07430 NZ_CP100601.1 Protein Homology CDS 1513870 1515048 . - 0 ID=cds-WP_002913041.1;Parent=gene-NLI98_RS07435;Dbxref=Genbank:WP_002913041.1;Name=WP_002913041.1;Ontology_term=GO:0006071,GO:0004368,GO:0051536,GO:0009331;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228015.1;locus_tag=NLI98_RS07435;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_002913041.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1515045 1516304 . - . ID=gene-NLI98_RS07440;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=NLI98_RS07440;old_locus_tag=NLI98_07435 NZ_CP100601.1 Protein Homology CDS 1515045 1516304 . - 0 ID=cds-WP_019704272.1;Parent=gene-NLI98_RS07440;Dbxref=Genbank:WP_019704272.1;Name=WP_019704272.1;Ontology_term=GO:0004368;gbkey=CDS;gene=glpB;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228014.1;locus_tag=NLI98_RS07440;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_019704272.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1516294 1517916 . - . ID=gene-NLI98_RS07445;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=NLI98_RS07445;old_locus_tag=NLI98_07440 NZ_CP100601.1 Protein Homology CDS 1516294 1517916 . - 0 ID=cds-WP_049001434.1;Parent=gene-NLI98_RS07445;Dbxref=Genbank:WP_049001434.1;Name=WP_049001434.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228013.1;locus_tag=NLI98_RS07445;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_049001434.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1518188 1519534 . + . ID=gene-NLI98_RS07450;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=NLI98_RS07450;old_locus_tag=NLI98_07445 NZ_CP100601.1 Protein Homology CDS 1518188 1519534 . + 0 ID=cds-WP_002913019.1;Parent=gene-NLI98_RS07450;Dbxref=Genbank:WP_002913019.1;Name=WP_002913019.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228012.1;locus_tag=NLI98_RS07450;product=glycerol-3-phosphate transporter;protein_id=WP_002913019.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1519544 1520614 . + . ID=gene-NLI98_RS07455;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=NLI98_RS07455;old_locus_tag=NLI98_07450 NZ_CP100601.1 Protein Homology CDS 1519544 1520614 . + 0 ID=cds-WP_049001435.1;Parent=gene-NLI98_RS07455;Dbxref=Genbank:WP_049001435.1;Name=WP_049001435.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228011.1;locus_tag=NLI98_RS07455;product=glycerophosphodiester phosphodiesterase;protein_id=WP_049001435.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1521078 1521332 . - . ID=gene-NLI98_RS07460;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=NLI98_RS07460;old_locus_tag=NLI98_07455 NZ_CP100601.1 Protein Homology CDS 1521078 1521332 . - 0 ID=cds-WP_004140836.1;Parent=gene-NLI98_RS07460;Dbxref=Genbank:WP_004140836.1;Name=WP_004140836.1;Ontology_term=GO:0051537;gbkey=CDS;gene=yfaE;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228010.1;locus_tag=NLI98_RS07460;product=class I ribonucleotide reductase maintenance protein YfaE;protein_id=WP_004140836.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1521332 1522462 . - . ID=gene-NLI98_RS07465;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=NLI98_RS07465;old_locus_tag=NLI98_07460 NZ_CP100601.1 Protein Homology CDS 1521332 1522462 . - 0 ID=cds-WP_004140835.1;Parent=gene-NLI98_RS07465;Dbxref=Genbank:WP_004140835.1;Name=WP_004140835.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=NLI98_RS07465;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_004140835.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1522564 1524849 . - . ID=gene-NLI98_RS07470;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=NLI98_RS07470;old_locus_tag=NLI98_07465 NZ_CP100601.1 Protein Homology CDS 1522564 1524849 . - 0 ID=cds-WP_002913016.1;Parent=gene-NLI98_RS07470;Dbxref=Genbank:WP_002913016.1;Name=WP_002913016.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129392.1;locus_tag=NLI98_RS07470;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_002913016.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1525194 1525922 . - . ID=gene-NLI98_RS07475;Name=NLI98_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07475;old_locus_tag=NLI98_07470 NZ_CP100601.1 Protein Homology CDS 1525194 1525922 . - 0 ID=cds-WP_002913014.1;Parent=gene-NLI98_RS07475;Dbxref=Genbank:WP_002913014.1;Name=WP_002913014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228007.1;locus_tag=NLI98_RS07475;product=bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase;protein_id=WP_002913014.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1526069 1528702 . + . ID=gene-NLI98_RS07480;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=NLI98_RS07480;old_locus_tag=NLI98_07475 NZ_CP100601.1 Protein Homology CDS 1526069 1528702 . + 0 ID=cds-WP_004140833.1;Parent=gene-NLI98_RS07480;Dbxref=Genbank:WP_004140833.1;Name=WP_004140833.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228006.1;locus_tag=NLI98_RS07480;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_004140833.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1528834 1531674 . + . ID=gene-NLI98_RS07485;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=NLI98_RS07485;old_locus_tag=NLI98_07480 NZ_CP100601.1 Protein Homology CDS 1528834 1531674 . + 0 ID=cds-WP_064173818.1;Parent=gene-NLI98_RS07485;Dbxref=Genbank:WP_064173818.1;Name=WP_064173818.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228005.1;locus_tag=NLI98_RS07485;product=two-component system sensor histidine kinase RcsC;protein_id=WP_064173818.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1531720 1532370 . - . ID=gene-NLI98_RS07490;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=NLI98_RS07490;old_locus_tag=NLI98_07485 NZ_CP100601.1 Protein Homology CDS 1531720 1532370 . - 0 ID=cds-WP_002913007.1;Parent=gene-NLI98_RS07490;Dbxref=Genbank:WP_002913007.1;Name=WP_002913007.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228004.1;locus_tag=NLI98_RS07490;product=response regulator transcription factor RcsB;protein_id=WP_002913007.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1532386 1535043 . - . ID=gene-NLI98_RS07495;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=NLI98_RS07495;old_locus_tag=NLI98_07490 NZ_CP100601.1 Protein Homology CDS 1532386 1535043 . - 0 ID=cds-WP_002913006.1;Parent=gene-NLI98_RS07495;Dbxref=Genbank:WP_002913006.1;Name=WP_002913006.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228003.1;locus_tag=NLI98_RS07495;product=phosphotransferase RcsD;protein_id=WP_002913006.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1535815 1536912 . + . ID=gene-NLI98_RS07500;Name=NLI98_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07500;old_locus_tag=NLI98_07495 NZ_CP100601.1 Protein Homology CDS 1535815 1536912 . + 0 ID=cds-WP_004180702.1;Parent=gene-NLI98_RS07500;Dbxref=Genbank:WP_004180702.1;Name=WP_004180702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228001.1;locus_tag=NLI98_RS07500;product=porin OmpC;protein_id=WP_004180702.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1537016 1538068 . + . ID=gene-NLI98_RS07505;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=NLI98_RS07505;old_locus_tag=NLI98_07500 NZ_CP100601.1 Protein Homology CDS 1537016 1538068 . + 0 ID=cds-WP_040169762.1;Parent=gene-NLI98_RS07505;Dbxref=Genbank:WP_040169762.1;Name=WP_040169762.1;Ontology_term=GO:0017013;gbkey=CDS;gene=apbE;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228000.1;locus_tag=NLI98_RS07505;product=FAD:protein FMN transferase ApbE;protein_id=WP_040169762.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1538142 1539206 . + . ID=gene-NLI98_RS07510;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=NLI98_RS07510;old_locus_tag=NLI98_07505 NZ_CP100601.1 Protein Homology CDS 1538142 1539206 . + 0 ID=cds-WP_002913002.1;Parent=gene-NLI98_RS07510;Dbxref=Genbank:WP_002913002.1;Name=WP_002913002.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227999.1;locus_tag=NLI98_RS07510;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_002913002.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1539206 1539859 . + . ID=gene-NLI98_RS07515;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=NLI98_RS07515;old_locus_tag=NLI98_07510 NZ_CP100601.1 Protein Homology CDS 1539206 1539859 . + 0 ID=cds-WP_014907176.1;Parent=gene-NLI98_RS07515;Dbxref=Genbank:WP_014907176.1;Name=WP_014907176.1;gbkey=CDS;gene=alkB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014907176.1;locus_tag=NLI98_RS07515;product=DNA oxidative demethylase AlkB;protein_id=WP_014907176.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1539934 1541577 . + . ID=gene-NLI98_RS07520;Name=NLI98_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07520;old_locus_tag=NLI98_07515 NZ_CP100601.1 Protein Homology CDS 1539934 1541577 . + 0 ID=cds-WP_004175044.1;Parent=gene-NLI98_RS07520;Dbxref=Genbank:WP_004175044.1;Name=WP_004175044.1;Ontology_term=GO:0015833,GO:0140359,GO:1904680;gbkey=CDS;go_function=ABC-type transporter activity|0140359||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227997.1;locus_tag=NLI98_RS07520;product=multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_004175044.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1541726 1543162 . + . ID=gene-NLI98_RS07525;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=NLI98_RS07525;old_locus_tag=NLI98_07520 NZ_CP100601.1 Protein Homology CDS 1541726 1543162 . + 0 ID=cds-WP_002912996.1;Parent=gene-NLI98_RS07525;Dbxref=Genbank:WP_002912996.1;Name=WP_002912996.1;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227996.1;locus_tag=NLI98_RS07525;product=magnesium transporter;protein_id=WP_002912996.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1543125 1544285 . - . ID=gene-NLI98_RS07530;Name=NLI98_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07530;old_locus_tag=NLI98_07525 NZ_CP100601.1 Protein Homology CDS 1543125 1544285 . - 0 ID=cds-WP_020324457.1;Parent=gene-NLI98_RS07530;Dbxref=Genbank:WP_020324457.1;Name=WP_020324457.1;Ontology_term=GO:0008272,GO:0015116,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227995.1;locus_tag=NLI98_RS07530;product=SulP family inorganic anion transporter;protein_id=WP_020324457.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1544645 1546279 . + . ID=gene-NLI98_RS07535;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=NLI98_RS07535;old_locus_tag=NLI98_07530 NZ_CP100601.1 Protein Homology CDS 1544645 1546279 . + 0 ID=cds-WP_002912994.1;Parent=gene-NLI98_RS07535;Dbxref=Genbank:WP_002912994.1;Name=WP_002912994.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227994.1;locus_tag=NLI98_RS07535;product=malate dehydrogenase (quinone);protein_id=WP_002912994.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1546346 1546837 . - . ID=gene-NLI98_RS07540;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=NLI98_RS07540;old_locus_tag=NLI98_07535 NZ_CP100601.1 Protein Homology CDS 1546346 1546837 . - 0 ID=cds-WP_004175048.1;Parent=gene-NLI98_RS07540;Dbxref=Genbank:WP_004175048.1;Name=WP_004175048.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227993.1;locus_tag=NLI98_RS07540;product=serine protease inhibitor ecotin;protein_id=WP_004175048.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1547012 1548121 . - . ID=gene-NLI98_RS07545;Name=NLI98_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07545;old_locus_tag=NLI98_07540 NZ_CP100601.1 Protein Homology CDS 1547012 1548121 . - 0 ID=cds-WP_002912992.1;Parent=gene-NLI98_RS07545;Dbxref=Genbank:WP_002912992.1;Name=WP_002912992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227992.1;locus_tag=NLI98_RS07545;product=AI-2E family transporter;protein_id=WP_002912992.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1548306 1548382 . - . ID=gene-NLI98_RS07550;Name=NLI98_RS07550;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS07550;old_locus_tag=NLI98_07545 NZ_CP100601.1 tRNAscan-SE tRNA 1548306 1548382 . - . ID=rna-NLI98_RS07550;Parent=gene-NLI98_RS07550;anticodon=(pos:complement(1548346..1548348));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS07550;product=tRNA-Pro NZ_CP100601.1 tRNAscan-SE exon 1548306 1548382 . - . ID=exon-NLI98_RS07550-1;Parent=rna-NLI98_RS07550;anticodon=(pos:complement(1548346..1548348));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS07550;product=tRNA-Pro NZ_CP100601.1 RefSeq gene 1548459 1550219 . - . ID=gene-NLI98_RS07555;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=NLI98_RS07555;old_locus_tag=NLI98_07550 NZ_CP100601.1 Protein Homology CDS 1548459 1550219 . - 0 ID=cds-WP_047718742.1;Parent=gene-NLI98_RS07555;Dbxref=Genbank:WP_047718742.1;Name=WP_047718742.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461172.1;locus_tag=NLI98_RS07555;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_047718742.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1550238 1550465 . - . ID=gene-NLI98_RS07560;Name=NLI98_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07560;old_locus_tag=NLI98_07555 NZ_CP100601.1 Protein Homology CDS 1550238 1550465 . - 0 ID=cds-WP_004195346.1;Parent=gene-NLI98_RS07560;Dbxref=Genbank:WP_004195346.1;Name=WP_004195346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311106.1;locus_tag=NLI98_RS07560;product=YejL family protein;protein_id=WP_004195346.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1550652 1551659 . + . ID=gene-NLI98_RS07565;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=NLI98_RS07565;old_locus_tag=NLI98_07560 NZ_CP100601.1 Protein Homology CDS 1550652 1551659 . + 0 ID=cds-WP_004144267.1;Parent=gene-NLI98_RS07565;Dbxref=Genbank:WP_004144267.1;Name=WP_004144267.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227989.1;locus_tag=NLI98_RS07565;product=nucleoid-associated protein YejK;protein_id=WP_004144267.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1551679 1552440 . - . ID=gene-NLI98_RS07570;Name=NLI98_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07570;old_locus_tag=NLI98_07565 NZ_CP100601.1 Protein Homology CDS 1551679 1552440 . - 0 ID=cds-WP_002912986.1;Parent=gene-NLI98_RS07570;Dbxref=Genbank:WP_002912986.1;Name=WP_002912986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227988.1;locus_tag=NLI98_RS07570;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_002912986.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1552523 1553119 . + . ID=gene-NLI98_RS07575;Name=NLI98_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07575;old_locus_tag=NLI98_07570 NZ_CP100601.1 Protein Homology CDS 1552523 1553119 . + 0 ID=cds-WP_004144265.1;Parent=gene-NLI98_RS07575;Dbxref=Genbank:WP_004144265.1;Name=WP_004144265.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227987.1;locus_tag=NLI98_RS07575;product=NUDIX domain-containing protein;protein_id=WP_004144265.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1553138 1554424 . - . ID=gene-NLI98_RS07580;Name=NLI98_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07580;old_locus_tag=NLI98_07575 NZ_CP100601.1 Protein Homology CDS 1553138 1554424 . - 0 ID=cds-WP_004175054.1;Parent=gene-NLI98_RS07580;Dbxref=Genbank:WP_004175054.1;Name=WP_004175054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227986.1;locus_tag=NLI98_RS07580;product=serine hydrolase;protein_id=WP_004175054.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1554529 1555416 . + . ID=gene-NLI98_RS07585;Name=NLI98_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07585;old_locus_tag=NLI98_07580 NZ_CP100601.1 Protein Homology CDS 1554529 1555416 . + 0 ID=cds-WP_002912983.1;Parent=gene-NLI98_RS07585;Dbxref=Genbank:WP_002912983.1;Name=WP_002912983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227985.1;locus_tag=NLI98_RS07585;product=LysR family transcriptional regulator;protein_id=WP_002912983.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1555475 1555759 . - . ID=gene-NLI98_RS07590;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=NLI98_RS07590;old_locus_tag=NLI98_07585 NZ_CP100601.1 Protein Homology CDS 1555475 1555759 . - 0 ID=cds-WP_002912979.1;Parent=gene-NLI98_RS07590;Dbxref=Genbank:WP_002912979.1;Name=WP_002912979.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=NLI98_RS07590;product=50S ribosomal protein L25;protein_id=WP_002912979.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1555896 1557653 . - . ID=gene-NLI98_RS07595;Name=NLI98_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07595;old_locus_tag=NLI98_07590 NZ_CP100601.1 Protein Homology CDS 1555896 1557653 . - 0 ID=cds-WP_004144263.1;Parent=gene-NLI98_RS07595;Dbxref=Genbank:WP_004144263.1;Name=WP_004144263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227983.1;locus_tag=NLI98_RS07595;product=DEAD/DEAH box helicase;protein_id=WP_004144263.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1557801 1558520 . + . ID=gene-NLI98_RS07600;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=NLI98_RS07600;old_locus_tag=NLI98_07595 NZ_CP100601.1 Protein Homology CDS 1557801 1558520 . + 0 ID=cds-WP_049001443.1;Parent=gene-NLI98_RS07600;Dbxref=Genbank:WP_049001443.1;Name=WP_049001443.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227982.1;locus_tag=NLI98_RS07600;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_049001443.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1558517 1559713 . + . ID=gene-NLI98_RS07605;Name=NLI98_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07605;old_locus_tag=NLI98_07600 NZ_CP100601.1 Protein Homology CDS 1558517 1559713 . + 0 ID=cds-WP_002912975.1;Parent=gene-NLI98_RS07605;Dbxref=Genbank:WP_002912975.1;Name=WP_002912975.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227981.1;locus_tag=NLI98_RS07605;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_002912975.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1560045 1560389 . + . ID=gene-NLI98_RS07610;Name=NLI98_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07610;old_locus_tag=NLI98_07605 NZ_CP100601.1 Protein Homology CDS 1560045 1560389 . + 0 ID=cds-WP_002912974.1;Parent=gene-NLI98_RS07610;Dbxref=Genbank:WP_002912974.1;Name=WP_002912974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227980.1;locus_tag=NLI98_RS07610;product=YejG family protein;protein_id=WP_002912974.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1560393 1561982 . - . ID=gene-NLI98_RS07615;Name=yejF;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=NLI98_RS07615;old_locus_tag=NLI98_07610 NZ_CP100601.1 Protein Homology CDS 1560393 1561982 . - 0 ID=cds-WP_004175056.1;Parent=gene-NLI98_RS07615;Dbxref=Genbank:WP_004175056.1;Name=WP_004175056.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=yejF;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227979.1;locus_tag=NLI98_RS07615;product=microcin C ABC transporter ATP-binding protein YejF;protein_id=WP_004175056.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1561984 1563009 . - . ID=gene-NLI98_RS07620;Name=NLI98_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07620;old_locus_tag=NLI98_07615 NZ_CP100601.1 Protein Homology CDS 1561984 1563009 . - 0 ID=cds-WP_088497974.1;Parent=gene-NLI98_RS07620;Dbxref=Genbank:WP_088497974.1;Name=WP_088497974.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227978.1;locus_tag=NLI98_RS07620;product=microcin C ABC transporter permease;protein_id=WP_088497974.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1563009 1564103 . - . ID=gene-NLI98_RS07625;Name=NLI98_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07625;old_locus_tag=NLI98_07620 NZ_CP100601.1 Protein Homology CDS 1563009 1564103 . - 0 ID=cds-WP_004200501.1;Parent=gene-NLI98_RS07625;Dbxref=Genbank:WP_004200501.1;Name=WP_004200501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227977.1;locus_tag=NLI98_RS07625;product=microcin C ABC transporter permease YejB;protein_id=WP_004200501.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1564113 1565918 . - . ID=gene-NLI98_RS07630;Name=NLI98_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07630;old_locus_tag=NLI98_07625 NZ_CP100601.1 Protein Homology CDS 1564113 1565918 . - 0 ID=cds-WP_023282861.1;Parent=gene-NLI98_RS07630;Dbxref=Genbank:WP_023282861.1;Name=WP_023282861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227976.1;locus_tag=NLI98_RS07630;product=extracellular solute-binding protein;protein_id=WP_023282861.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1565987 1567549 . - . ID=gene-NLI98_RS07635;Name=NLI98_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07635;old_locus_tag=NLI98_07630 NZ_CP100601.1 Protein Homology CDS 1565987 1567549 . - 0 ID=cds-WP_019704989.1;Parent=gene-NLI98_RS07635;Dbxref=Genbank:WP_019704989.1;Name=WP_019704989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227975.1;locus_tag=NLI98_RS07635;product=cyclic di-GMP phosphodiesterase;protein_id=WP_019704989.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1567738 1568307 . - . ID=gene-NLI98_RS07640;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=NLI98_RS07640;old_locus_tag=NLI98_07635 NZ_CP100601.1 Protein Homology CDS 1567738 1568307 . - 0 ID=cds-WP_002912967.1;Parent=gene-NLI98_RS07640;Dbxref=Genbank:WP_002912967.1;Name=WP_002912967.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461158.1;locus_tag=NLI98_RS07640;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_002912967.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1568734 1569447 . - . ID=gene-NLI98_RS07645;Name=NLI98_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07645;old_locus_tag=NLI98_07640 NZ_CP100601.1 Protein Homology CDS 1568734 1569447 . - 0 ID=cds-WP_002912965.1;Parent=gene-NLI98_RS07645;Dbxref=Genbank:WP_002912965.1;Name=WP_002912965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227973.1;locus_tag=NLI98_RS07645;product=phosphatase PAP2 family protein;protein_id=WP_002912965.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1569485 1570462 . - . ID=gene-NLI98_RS07650;Name=NLI98_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07650;old_locus_tag=NLI98_07645 NZ_CP100601.1 Protein Homology CDS 1569485 1570462 . - 0 ID=cds-WP_040222271.1;Parent=gene-NLI98_RS07650;Dbxref=Genbank:WP_040222271.1;Name=WP_040222271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227972.1;locus_tag=NLI98_RS07650;product=GTP-binding protein;protein_id=WP_040222271.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1570583 1572049 . - . ID=gene-NLI98_RS07655;Name=NLI98_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07655;old_locus_tag=NLI98_07650 NZ_CP100601.1 Protein Homology CDS 1570583 1572049 . - 0 ID=cds-WP_264452181.1;Parent=gene-NLI98_RS07655;Dbxref=Genbank:WP_264452181.1;Name=WP_264452181.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227971.1;locus_tag=NLI98_RS07655;product=fructuronate reductase;protein_id=WP_264452181.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1572257 1573447 . + . ID=gene-NLI98_RS07660;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=NLI98_RS07660;old_locus_tag=NLI98_07655 NZ_CP100601.1 Protein Homology CDS 1572257 1573447 . + 0 ID=cds-WP_032447752.1;Parent=gene-NLI98_RS07660;Dbxref=Genbank:WP_032447752.1;Name=WP_032447752.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227970.1;locus_tag=NLI98_RS07660;product=mannonate dehydratase;protein_id=WP_032447752.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1573518 1574090 . - . ID=gene-NLI98_RS07665;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=NLI98_RS07665;old_locus_tag=NLI98_07660 NZ_CP100601.1 Protein Homology CDS 1573518 1574090 . - 0 ID=cds-WP_002912951.1;Parent=gene-NLI98_RS07665;Dbxref=Genbank:WP_002912951.1;Name=WP_002912951.1;Ontology_term=GO:0006414,GO:0043043,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA,peptide biosynthetic process|0043043||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007750416.1;locus_tag=NLI98_RS07665;product=elongation factor P-like protein YeiP;protein_id=WP_002912951.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1574238 1574492 . + . ID=gene-NLI98_RS07670;Name=NLI98_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07670;old_locus_tag=NLI98_07665 NZ_CP100601.1 Protein Homology CDS 1574238 1574492 . + 0 ID=cds-WP_004175066.1;Parent=gene-NLI98_RS07670;Dbxref=Genbank:WP_004175066.1;Name=WP_004175066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201647.1;locus_tag=NLI98_RS07670;product=YkgJ family cysteine cluster protein;protein_id=WP_004175066.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1574532 1575713 . - . ID=gene-NLI98_RS07675;Name=setB;gbkey=Gene;gene=setB;gene_biotype=protein_coding;locus_tag=NLI98_RS07675;old_locus_tag=NLI98_07670 NZ_CP100601.1 Protein Homology CDS 1574532 1575713 . - 0 ID=cds-WP_004151122.1;Parent=gene-NLI98_RS07675;Dbxref=Genbank:WP_004151122.1;Name=WP_004151122.1;Ontology_term=GO:0008643,GO:0055085,GO:0005351,GO:0022857,GO:0016020;gbkey=CDS;gene=setB;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227966.1;locus_tag=NLI98_RS07675;product=sugar efflux transporter SetB;protein_id=WP_004151122.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1576050 1577180 . + . ID=gene-NLI98_RS07680;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=NLI98_RS07680;old_locus_tag=NLI98_07675 NZ_CP100601.1 Protein Homology CDS 1576050 1577180 . + 0 ID=cds-WP_002912947.1;Parent=gene-NLI98_RS07680;Dbxref=Genbank:WP_002912947.1;Name=WP_002912947.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227965.1;locus_tag=NLI98_RS07680;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_002912947.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1577181 1578119 . + . ID=gene-NLI98_RS07685;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=NLI98_RS07685;old_locus_tag=NLI98_07680 NZ_CP100601.1 Protein Homology CDS 1577181 1578119 . + 0 ID=cds-WP_002912941.1;Parent=gene-NLI98_RS07685;Dbxref=Genbank:WP_002912941.1;Name=WP_002912941.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227964.1;locus_tag=NLI98_RS07685;product=1-phosphofructokinase;protein_id=WP_002912941.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1578136 1579830 . + . ID=gene-NLI98_RS07690;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=NLI98_RS07690;old_locus_tag=NLI98_07685 NZ_CP100601.1 Protein Homology CDS 1578136 1579830 . + 0 ID=cds-WP_002912939.1;Parent=gene-NLI98_RS07690;Dbxref=Genbank:WP_002912939.1;Name=WP_002912939.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;gene=fruA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227963.1;locus_tag=NLI98_RS07690;product=PTS fructose transporter subunit IIBC;protein_id=WP_002912939.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1579881 1580735 . - . ID=gene-NLI98_RS07695;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=NLI98_RS07695;old_locus_tag=NLI98_07690 NZ_CP100601.1 Protein Homology CDS 1579881 1580735 . - 0 ID=cds-WP_002912937.1;Parent=gene-NLI98_RS07695;Dbxref=Genbank:WP_002912937.1;Name=WP_002912937.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129226.1;locus_tag=NLI98_RS07695;product=deoxyribonuclease IV;protein_id=WP_002912937.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1580808 1581857 . - . ID=gene-NLI98_RS07700;Name=NLI98_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07700;old_locus_tag=NLI98_07695 NZ_CP100601.1 Protein Homology CDS 1580808 1581857 . - 0 ID=cds-WP_064146006.1;Parent=gene-NLI98_RS07700;Dbxref=Genbank:WP_064146006.1;Name=WP_064146006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227961.1;locus_tag=NLI98_RS07700;product=YeiH family protein;protein_id=WP_064146006.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1582123 1582989 . + . ID=gene-NLI98_RS07705;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=NLI98_RS07705;old_locus_tag=NLI98_07700 NZ_CP100601.1 Protein Homology CDS 1582123 1582989 . + 0 ID=cds-WP_088497973.1;Parent=gene-NLI98_RS07705;Dbxref=Genbank:WP_088497973.1;Name=WP_088497973.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227959.1;locus_tag=NLI98_RS07705;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_088497973.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1583168 1584637 . + . ID=gene-NLI98_RS07710;Name=NLI98_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07710;old_locus_tag=NLI98_07705 NZ_CP100601.1 Protein Homology CDS 1583168 1584637 . + 0 ID=cds-WP_002912929.1;Parent=gene-NLI98_RS07710;Dbxref=Genbank:WP_002912929.1;Name=WP_002912929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227958.1;locus_tag=NLI98_RS07710;product=amino acid permease;protein_id=WP_002912929.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1584777 1586140 . + . ID=gene-NLI98_RS07715;Name=NLI98_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07715;old_locus_tag=NLI98_07710 NZ_CP100601.1 Protein Homology CDS 1584777 1585245 . + 0 ID=cds-WP_172676867.1;Parent=gene-NLI98_RS07715;Dbxref=Genbank:WP_172676867.1;Name=WP_172676867.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1;locus_tag=NLI98_RS07715;product=IS3-like element ISKpn1 family transposase;protein_id=WP_172676867.1;transl_table=11 NZ_CP100601.1 Protein Homology CDS 1585245 1586140 . + 2 ID=cds-WP_172676867.1;Parent=gene-NLI98_RS07715;Dbxref=Genbank:WP_172676867.1;Name=WP_172676867.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1;locus_tag=NLI98_RS07715;product=IS3-like element ISKpn1 family transposase;protein_id=WP_172676867.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1586584 1588557 . + . ID=gene-NLI98_RS07720;Name=cirA;gbkey=Gene;gene=cirA;gene_biotype=protein_coding;locus_tag=NLI98_RS07720;old_locus_tag=NLI98_07715 NZ_CP100601.1 Protein Homology CDS 1586584 1588557 . + 0 ID=cds-WP_002912926.1;Parent=gene-NLI98_RS07720;Dbxref=Genbank:WP_002912926.1;Name=WP_002912926.1;gbkey=CDS;gene=cirA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461144.1;locus_tag=NLI98_RS07720;product=catecholate siderophore receptor CirA;protein_id=WP_002912926.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1588628 1589461 . - . ID=gene-NLI98_RS07725;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=NLI98_RS07725;old_locus_tag=NLI98_07720 NZ_CP100601.1 Protein Homology CDS 1588628 1589461 . - 0 ID=cds-WP_009307410.1;Parent=gene-NLI98_RS07725;Dbxref=Genbank:WP_009307410.1;Name=WP_009307410.1;Ontology_term=GO:0046292,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227955.1;locus_tag=NLI98_RS07725;product=S-formylglutathione hydrolase;protein_id=WP_009307410.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1589822 1590490 . + . ID=gene-NLI98_RS07730;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=NLI98_RS07730;old_locus_tag=NLI98_07725 NZ_CP100601.1 Protein Homology CDS 1589822 1590490 . + 0 ID=cds-WP_002912924.1;Parent=gene-NLI98_RS07730;Dbxref=Genbank:WP_002912924.1;Name=WP_002912924.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227954.1;locus_tag=NLI98_RS07730;product=GTP cyclohydrolase I FolE;protein_id=WP_002912924.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1590506 1591663 . + . ID=gene-NLI98_RS07735;Name=NLI98_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07735;old_locus_tag=NLI98_07730 NZ_CP100601.1 Protein Homology CDS 1590506 1591663 . + 0 ID=cds-WP_004149106.1;Parent=gene-NLI98_RS07735;Dbxref=Genbank:WP_004149106.1;Name=WP_004149106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227953.1;locus_tag=NLI98_RS07735;product=DUF418 family protein;protein_id=WP_004149106.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1591819 1592841 . + . ID=gene-NLI98_RS07740;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=NLI98_RS07740;old_locus_tag=NLI98_07735 NZ_CP100601.1 Protein Homology CDS 1591819 1592841 . + 0 ID=cds-WP_002912919.1;Parent=gene-NLI98_RS07740;Dbxref=Genbank:WP_002912919.1;Name=WP_002912919.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=galS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227952.1;locus_tag=NLI98_RS07740;product=HTH-type transcriptional regulator GalS;protein_id=WP_002912919.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1593138 1594136 . + . ID=gene-NLI98_RS07745;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=NLI98_RS07745;old_locus_tag=NLI98_07740 NZ_CP100601.1 Protein Homology CDS 1593138 1594136 . + 0 ID=cds-WP_002912878.1;Parent=gene-NLI98_RS07745;Dbxref=Genbank:WP_002912878.1;Name=WP_002912878.1;Ontology_term=GO:0030246;gbkey=CDS;gene=mglB;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416655.1;locus_tag=NLI98_RS07745;product=galactose/glucose ABC transporter substrate-binding protein MglB;protein_id=WP_002912878.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1594255 1595775 . + . ID=gene-NLI98_RS07750;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=NLI98_RS07750;old_locus_tag=NLI98_07745 NZ_CP100601.1 Protein Homology CDS 1594255 1595775 . + 0 ID=cds-WP_002912876.1;Parent=gene-NLI98_RS07750;Dbxref=Genbank:WP_002912876.1;Name=WP_002912876.1;Ontology_term=GO:0008643,GO:0005524,GO:0043211,GO:0016020;gbkey=CDS;gene=mglA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type carbohydrate transporter activity|0043211||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020883197.1;locus_tag=NLI98_RS07750;product=galactose/methyl galactoside ABC transporter ATP-binding protein MglA;protein_id=WP_002912876.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1595791 1596801 . + . ID=gene-NLI98_RS07755;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=NLI98_RS07755;old_locus_tag=NLI98_07750 NZ_CP100601.1 Protein Homology CDS 1595791 1596801 . + 0 ID=cds-WP_002912871.1;Parent=gene-NLI98_RS07755;Dbxref=Genbank:WP_002912871.1;Name=WP_002912871.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mglC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129205.1;locus_tag=NLI98_RS07755;product=galactose/methyl galactoside ABC transporter permease MglC;protein_id=WP_002912871.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1596872 1597588 . - . ID=gene-NLI98_RS07760;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=NLI98_RS07760;old_locus_tag=NLI98_07755 NZ_CP100601.1 Protein Homology CDS 1596872 1597588 . - 0 ID=cds-WP_065811969.1;Parent=gene-NLI98_RS07760;Dbxref=Genbank:WP_065811969.1;Name=WP_065811969.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227948.1;locus_tag=NLI98_RS07760;product=outer membrane permeability protein SanA;protein_id=WP_065811969.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1597864 1598748 . - . ID=gene-NLI98_RS07765;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=NLI98_RS07765;old_locus_tag=NLI98_07760 NZ_CP100601.1 Protein Homology CDS 1597864 1598748 . - 0 ID=cds-WP_004200488.1;Parent=gene-NLI98_RS07765;Dbxref=Genbank:WP_004200488.1;Name=WP_004200488.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227947.1;locus_tag=NLI98_RS07765;product=cytidine deaminase;protein_id=WP_004200488.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1598876 1599571 . - . ID=gene-NLI98_RS07770;Name=NLI98_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07770;old_locus_tag=NLI98_07765 NZ_CP100601.1 Protein Homology CDS 1598876 1599571 . - 0 ID=cds-WP_002912867.1;Parent=gene-NLI98_RS07770;Dbxref=Genbank:WP_002912867.1;Name=WP_002912867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227946.1;locus_tag=NLI98_RS07770;product=CidB/LrgB family autolysis modulator;protein_id=WP_002912867.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1599568 1599966 . - . ID=gene-NLI98_RS07775;Name=NLI98_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07775;old_locus_tag=NLI98_07770 NZ_CP100601.1 Protein Homology CDS 1599568 1599966 . - 0 ID=cds-WP_002912865.1;Parent=gene-NLI98_RS07775;Dbxref=Genbank:WP_002912865.1;Name=WP_002912865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227945.1;locus_tag=NLI98_RS07775;product=CidA/LrgA family protein;protein_id=WP_002912865.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1600324 1601256 . + . ID=gene-NLI98_RS07780;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=NLI98_RS07780;old_locus_tag=NLI98_07775 NZ_CP100601.1 Protein Homology CDS 1600324 1601256 . + 0 ID=cds-WP_002912862.1;Parent=gene-NLI98_RS07780;Dbxref=Genbank:WP_002912862.1;Name=WP_002912862.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227944.1;locus_tag=NLI98_RS07780;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_002912862.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1601613 1602977 . + . ID=gene-NLI98_RS07785;Name=NLI98_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07785;old_locus_tag=NLI98_07780 NZ_CP100601.1 Protein Homology CDS 1601613 1602977 . + 0 ID=cds-WP_088498415.1;Parent=gene-NLI98_RS07785;Dbxref=Genbank:WP_088498415.1;Name=WP_088498415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227943.1;locus_tag=NLI98_RS07785;product=carbohydrate porin;protein_id=WP_088498415.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1603133 1603966 . + . ID=gene-NLI98_RS07790;Name=bglG;gbkey=Gene;gene=bglG;gene_biotype=protein_coding;locus_tag=NLI98_RS07790;old_locus_tag=NLI98_07785 NZ_CP100601.1 Protein Homology CDS 1603133 1603966 . + 0 ID=cds-WP_060876447.1;Parent=gene-NLI98_RS07790;Dbxref=Genbank:WP_060876447.1;Name=WP_060876447.1;Ontology_term=GO:0006355;gbkey=CDS;gene=bglG;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004864750.1;locus_tag=NLI98_RS07790;product=transcriptional antiterminator BglG;protein_id=WP_060876447.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1603997 1605971 . + . ID=gene-NLI98_RS07795;Name=bglF;gbkey=Gene;gene=bglF;gene_biotype=pseudogene;locus_tag=NLI98_RS07795;old_locus_tag=NLI98_07790;pseudo=true NZ_CP100601.1 Protein Homology CDS 1603997 1605971 . + 0 ID=cds-NLI98_RS07795;Parent=gene-NLI98_RS07795;Note=frameshifted;gbkey=CDS;gene=bglF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227941.1;locus_tag=NLI98_RS07795;product=PTS beta-glucoside transporter subunit IIABC;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 1605987 1607381 . + . ID=gene-NLI98_RS07800;Name=ascB;gbkey=Gene;gene=ascB;gene_biotype=protein_coding;locus_tag=NLI98_RS07800;old_locus_tag=NLI98_07795 NZ_CP100601.1 Protein Homology CDS 1605987 1607381 . + 0 ID=cds-WP_088498417.1;Parent=gene-NLI98_RS07800;Dbxref=Genbank:WP_088498417.1;Name=WP_088498417.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=ascB;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227940.1;locus_tag=NLI98_RS07800;product=6-phospho-beta-glucosidase;protein_id=WP_088498417.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1607654 1609093 . + . ID=gene-NLI98_RS07805;Name=mdtQ;gbkey=Gene;gene=mdtQ;gene_biotype=protein_coding;locus_tag=NLI98_RS07805;old_locus_tag=NLI98_07800 NZ_CP100601.1 Protein Homology CDS 1607654 1609093 . + 0 ID=cds-WP_048990839.1;Parent=gene-NLI98_RS07805;Dbxref=Genbank:WP_048990839.1;Name=WP_048990839.1;Ontology_term=GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;gene=mdtQ;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227938.1;locus_tag=NLI98_RS07805;product=multidrug resistance outer membrane protein MdtQ;protein_id=WP_048990839.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1609127 1609696 . - . ID=gene-NLI98_RS07810;Name=NLI98_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07810;old_locus_tag=NLI98_07805 NZ_CP100601.1 Protein Homology CDS 1609127 1609696 . - 0 ID=cds-WP_002912833.1;Parent=gene-NLI98_RS07810;Dbxref=Genbank:WP_002912833.1;Name=WP_002912833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227937.1;locus_tag=NLI98_RS07810;product=DedA family protein;protein_id=WP_002912833.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1609851 1610438 . + . ID=gene-NLI98_RS07815;Name=NLI98_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07815;old_locus_tag=NLI98_07810 NZ_CP100601.1 Protein Homology CDS 1609851 1610438 . + 0 ID=cds-WP_002912831.1;Parent=gene-NLI98_RS07815;Dbxref=Genbank:WP_002912831.1;Name=WP_002912831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227936.1;locus_tag=NLI98_RS07815;product=YIP1 family protein;protein_id=WP_002912831.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1610627 1611577 . + . ID=gene-NLI98_RS07820;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=NLI98_RS07820;old_locus_tag=NLI98_07815 NZ_CP100601.1 Protein Homology CDS 1610627 1611577 . + 0 ID=cds-WP_074177878.1;Parent=gene-NLI98_RS07820;Dbxref=Genbank:WP_074177878.1;Name=WP_074177878.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227935.1;locus_tag=NLI98_RS07820;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_074177878.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1611800 1612354 . - . ID=gene-NLI98_RS07825;Name=NLI98_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07825;old_locus_tag=NLI98_07820 NZ_CP100601.1 Protein Homology CDS 1611800 1612354 . - 0 ID=cds-WP_002912829.1;Parent=gene-NLI98_RS07825;Dbxref=Genbank:WP_002912829.1;Name=WP_002912829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227934.1;locus_tag=NLI98_RS07825;product=GNAT family N-acetyltransferase;protein_id=WP_002912829.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1612440 1614185 . - . ID=gene-NLI98_RS07830;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=NLI98_RS07830;old_locus_tag=NLI98_07825 NZ_CP100601.1 Protein Homology CDS 1612440 1614185 . - 0 ID=cds-WP_002912827.1;Parent=gene-NLI98_RS07830;Dbxref=Genbank:WP_002912827.1;Name=WP_002912827.1;Ontology_term=GO:0006089,GO:0019516,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA,lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227933.1;locus_tag=NLI98_RS07830;product=D-lactate dehydrogenase;protein_id=WP_002912827.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1614380 1616677 . + . ID=gene-NLI98_RS07835;Name=bglX;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=NLI98_RS07835;old_locus_tag=NLI98_07830 NZ_CP100601.1 Protein Homology CDS 1614380 1616677 . + 0 ID=cds-WP_002912825.1;Parent=gene-NLI98_RS07835;Dbxref=Genbank:WP_002912825.1;Name=WP_002912825.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bglX;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416636.1;locus_tag=NLI98_RS07835;product=beta-glucosidase BglX;protein_id=WP_002912825.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1616814 1617731 . + . ID=gene-NLI98_RS07840;Name=NLI98_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07840;old_locus_tag=NLI98_07835 NZ_CP100601.1 Protein Homology CDS 1616814 1617731 . + 0 ID=cds-WP_087866851.1;Parent=gene-NLI98_RS07840;Dbxref=Genbank:WP_087866851.1;Name=WP_087866851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227931.1;locus_tag=NLI98_RS07840;product=ABC transporter substrate-binding protein;protein_id=WP_087866851.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1617739 1618896 . + . ID=gene-NLI98_RS07845;Name=NLI98_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07845;old_locus_tag=NLI98_07840 NZ_CP100601.1 Protein Homology CDS 1617739 1618896 . + 0 ID=cds-WP_004144224.1;Parent=gene-NLI98_RS07845;Dbxref=Genbank:WP_004144224.1;Name=WP_004144224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227930.1;locus_tag=NLI98_RS07845;product=ABC transporter permease;protein_id=WP_004144224.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1618889 1619836 . + . ID=gene-NLI98_RS07850;Name=NLI98_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07850;old_locus_tag=NLI98_07845 NZ_CP100601.1 Protein Homology CDS 1618889 1619836 . + 0 ID=cds-WP_087866852.1;Parent=gene-NLI98_RS07850;Dbxref=Genbank:WP_087866852.1;Name=WP_087866852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227929.1;locus_tag=NLI98_RS07850;product=ABC transporter ATP-binding protein;protein_id=WP_087866852.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1619820 1620557 . + . ID=gene-NLI98_RS07855;Name=NLI98_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07855;old_locus_tag=NLI98_07850 NZ_CP100601.1 Protein Homology CDS 1619820 1620557 . + 0 ID=cds-WP_088498418.1;Parent=gene-NLI98_RS07855;Dbxref=Genbank:WP_088498418.1;Name=WP_088498418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227928.1;locus_tag=NLI98_RS07855;product=ABC transporter permease;protein_id=WP_088498418.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1620532 1620645 . - . ID=gene-NLI98_RS07860;Name=NLI98_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07860;old_locus_tag=NLI98_07855 NZ_CP100601.1 Protein Homology CDS 1620532 1620645 . - 0 ID=cds-WP_002912762.1;Parent=gene-NLI98_RS07860;Dbxref=Genbank:WP_002912762.1;Name=WP_002912762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227927.1;locus_tag=NLI98_RS07860;product=protein YohO;protein_id=WP_002912762.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1620875 1622563 . + . ID=gene-NLI98_RS07865;Name=NLI98_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07865;old_locus_tag=NLI98_07860 NZ_CP100601.1 Protein Homology CDS 1620875 1622563 . + 0 ID=cds-WP_002912760.1;Parent=gene-NLI98_RS07865;Dbxref=Genbank:WP_002912760.1;Name=WP_002912760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227926.1;locus_tag=NLI98_RS07865;product=sensor histidine kinase;protein_id=WP_002912760.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1622557 1623276 . + . ID=gene-NLI98_RS07870;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=NLI98_RS07870;old_locus_tag=NLI98_07865 NZ_CP100601.1 Protein Homology CDS 1622557 1623276 . + 0 ID=cds-WP_049182465.1;Parent=gene-NLI98_RS07870;Dbxref=Genbank:WP_049182465.1;Name=WP_049182465.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227925.1;locus_tag=NLI98_RS07870;product=two-component system response regulator BtsR;protein_id=WP_049182465.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1623323 1623793 . + . ID=gene-NLI98_RS07875;Name=NLI98_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07875;old_locus_tag=NLI98_07870 NZ_CP100601.1 Protein Homology CDS 1623323 1623793 . + 0 ID=cds-WP_080916552.1;Parent=gene-NLI98_RS07875;Dbxref=Genbank:WP_080916552.1;Name=WP_080916552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227924.1;locus_tag=NLI98_RS07875;product=DUF1456 family protein;protein_id=WP_080916552.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1623908 1625941 . - . ID=gene-NLI98_RS07880;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=NLI98_RS07880;old_locus_tag=NLI98_07875 NZ_CP100601.1 Protein Homology CDS 1623908 1625941 . - 0 ID=cds-WP_002912753.1;Parent=gene-NLI98_RS07880;Dbxref=Genbank:WP_002912753.1;Name=WP_002912753.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310947.1;locus_tag=NLI98_RS07880;product=methionine--tRNA ligase;protein_id=WP_002912753.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1626095 1627204 . + . ID=gene-NLI98_RS07885;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=NLI98_RS07885;old_locus_tag=NLI98_07880 NZ_CP100601.1 Protein Homology CDS 1626095 1627204 . + 0 ID=cds-WP_264452190.1;Parent=gene-NLI98_RS07885;Dbxref=Genbank:WP_264452190.1;Name=WP_264452190.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310946.2;locus_tag=NLI98_RS07885;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_264452190.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1627201 1627665 . - . ID=gene-NLI98_RS07890;Name=NLI98_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07890;old_locus_tag=NLI98_07885 NZ_CP100601.1 Protein Homology CDS 1627201 1627665 . - 0 ID=cds-WP_172676868.1;Parent=gene-NLI98_RS07890;Dbxref=Genbank:WP_172676868.1;Name=WP_172676868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227919.1;locus_tag=NLI98_RS07890;product=GNAT family N-acetyltransferase;protein_id=WP_172676868.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1627637 1627954 . - . ID=gene-NLI98_RS07895;Name=NLI98_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07895;old_locus_tag=NLI98_07890 NZ_CP100601.1 Protein Homology CDS 1627637 1627954 . - 0 ID=cds-WP_002912749.1;Parent=gene-NLI98_RS07895;Dbxref=Genbank:WP_002912749.1;Name=WP_002912749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227918.1;locus_tag=NLI98_RS07895;product=RcnB family protein;protein_id=WP_002912749.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1628138 1629037 . + . ID=gene-NLI98_RS07900;Name=NLI98_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07900;old_locus_tag=NLI98_07895 NZ_CP100601.1 Protein Homology CDS 1628138 1629037 . + 0 ID=cds-WP_004149074.1;Parent=gene-NLI98_RS07900;Dbxref=Genbank:WP_004149074.1;Name=WP_004149074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227917.1;locus_tag=NLI98_RS07900;product=LysR family transcriptional regulator;protein_id=WP_004149074.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1629027 1630370 . - . ID=gene-NLI98_RS07905;Name=NLI98_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07905;old_locus_tag=NLI98_07900 NZ_CP100601.1 Protein Homology CDS 1629027 1630370 . - 0 ID=cds-WP_019725440.1;Parent=gene-NLI98_RS07905;Dbxref=Genbank:WP_019725440.1;Name=WP_019725440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227916.1;locus_tag=NLI98_RS07905;product=NCS2 family permease;protein_id=WP_019725440.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1630373 1632184 . - . ID=gene-NLI98_RS07910;Name=NLI98_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07910;old_locus_tag=NLI98_07905 NZ_CP100601.1 Protein Homology CDS 1630373 1632184 . - 0 ID=cds-WP_088498420.1;Parent=gene-NLI98_RS07910;Dbxref=Genbank:WP_088498420.1;Name=WP_088498420.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227915.1;locus_tag=NLI98_RS07910;product=amidohydrolase family protein;protein_id=WP_088498420.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1632305 1633219 . + . ID=gene-NLI98_RS07915;Name=NLI98_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07915;old_locus_tag=NLI98_07910 NZ_CP100601.1 Protein Homology CDS 1632305 1633219 . + 0 ID=cds-WP_004175111.1;Parent=gene-NLI98_RS07915;Dbxref=Genbank:WP_004175111.1;Name=WP_004175111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227914.1;locus_tag=NLI98_RS07915;product=LysR family transcriptional regulator;protein_id=WP_004175111.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1633216 1633638 . - . ID=gene-NLI98_RS07920;Name=NLI98_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07920;old_locus_tag=NLI98_07915 NZ_CP100601.1 Protein Homology CDS 1633216 1633638 . - 0 ID=cds-WP_088498421.1;Parent=gene-NLI98_RS07920;Dbxref=Genbank:WP_088498421.1;Name=WP_088498421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227913.1;locus_tag=NLI98_RS07920;product=universal stress protein;protein_id=WP_088498421.1;transl_table=11 NZ_CP100601.1 cmsearch riboswitch 1633824 1633921 . + . ID=id-NZ_CP100601.1:1633824..1633921;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100601.1 RefSeq gene 1633956 1634729 . + . ID=gene-NLI98_RS07925;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=NLI98_RS07925;old_locus_tag=NLI98_07920 NZ_CP100601.1 Protein Homology CDS 1633956 1634729 . + 0 ID=cds-WP_012541053.1;Parent=gene-NLI98_RS07925;Dbxref=Genbank:WP_012541053.1;Name=WP_012541053.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227911.1;locus_tag=NLI98_RS07925;product=hydroxyethylthiazole kinase;protein_id=WP_012541053.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1634726 1635526 . + . ID=gene-NLI98_RS07930;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=NLI98_RS07930;old_locus_tag=NLI98_07925 NZ_CP100601.1 Protein Homology CDS 1634726 1635526 . + 0 ID=cds-WP_002912707.1;Parent=gene-NLI98_RS07930;Dbxref=Genbank:WP_002912707.1;Name=WP_002912707.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227910.1;locus_tag=NLI98_RS07930;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_002912707.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1635674 1636726 . + . ID=gene-NLI98_RS07935;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=NLI98_RS07935;old_locus_tag=NLI98_07930 NZ_CP100601.1 Protein Homology CDS 1635674 1636726 . + 0 ID=cds-WP_002912704.1;Parent=gene-NLI98_RS07935;Dbxref=Genbank:WP_002912704.1;Name=WP_002912704.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=NLI98_RS07935;product=class I fructose-bisphosphate aldolase;protein_id=WP_002912704.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1636785 1638068 . - . ID=gene-NLI98_RS07940;Name=NLI98_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07940;old_locus_tag=NLI98_07935 NZ_CP100601.1 Protein Homology CDS 1636785 1638068 . - 0 ID=cds-WP_004175116.1;Parent=gene-NLI98_RS07940;Dbxref=Genbank:WP_004175116.1;Name=WP_004175116.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227908.1;locus_tag=NLI98_RS07940;product=RbtT/DalT/CsbX family MFS transporter;protein_id=WP_004175116.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1638150 1639757 . - . ID=gene-NLI98_RS07945;Name=NLI98_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07945;old_locus_tag=NLI98_07940 NZ_CP100601.1 Protein Homology CDS 1638150 1639757 . - 0 ID=cds-WP_088498413.1;Parent=gene-NLI98_RS07945;Dbxref=Genbank:WP_088498413.1;Name=WP_088498413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227907.1;locus_tag=NLI98_RS07945;product=FGGY-family carbohydrate kinase;protein_id=WP_088498413.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1639784 1640533 . - . ID=gene-NLI98_RS07950;Name=NLI98_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07950;old_locus_tag=NLI98_07945 NZ_CP100601.1 Protein Homology CDS 1639784 1640533 . - 0 ID=cds-WP_004180592.1;Parent=gene-NLI98_RS07950;Dbxref=Genbank:WP_004180592.1;Name=WP_004180592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227906.1;locus_tag=NLI98_RS07950;product=SDR family oxidoreductase;protein_id=WP_004180592.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1640788 1641789 . + . ID=gene-NLI98_RS07955;Name=NLI98_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07955;old_locus_tag=NLI98_07950 NZ_CP100601.1 Protein Homology CDS 1640788 1641789 . + 0 ID=cds-WP_004175120.1;Parent=gene-NLI98_RS07955;Dbxref=Genbank:WP_004175120.1;Name=WP_004175120.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227905.1;locus_tag=NLI98_RS07955;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_004175120.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1641812 1642753 . - . ID=gene-NLI98_RS07960;Name=NLI98_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07960;old_locus_tag=NLI98_07955 NZ_CP100601.1 Protein Homology CDS 1641812 1642753 . - 0 ID=cds-WP_040153168.1;Parent=gene-NLI98_RS07960;Dbxref=Genbank:WP_040153168.1;Name=WP_040153168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227904.1;locus_tag=NLI98_RS07960;product=helix-turn-helix domain-containing protein;protein_id=WP_040153168.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1642960 1644327 . + . ID=gene-NLI98_RS07965;Name=NLI98_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07965;old_locus_tag=NLI98_07960 NZ_CP100601.1 Protein Homology CDS 1642960 1644327 . + 0 ID=cds-WP_088498412.1;Parent=gene-NLI98_RS07965;Dbxref=Genbank:WP_088498412.1;Name=WP_088498412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227903.1;locus_tag=NLI98_RS07965;product=mannitol dehydrogenase family protein;protein_id=WP_088498412.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1644337 1645800 . + . ID=gene-NLI98_RS07970;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=NLI98_RS07970;old_locus_tag=NLI98_07965 NZ_CP100601.1 Protein Homology CDS 1644337 1645800 . + 0 ID=cds-WP_088498411.1;Parent=gene-NLI98_RS07970;Dbxref=Genbank:WP_088498411.1;Name=WP_088498411.1;Ontology_term=GO:0005997,GO:0042732,GO:0004856,GO:0005515;gbkey=CDS;gene=xylB;go_function=xylulokinase activity|0004856||IEA,protein binding|0005515||IEA;go_process=xylulose metabolic process|0005997||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227902.1;locus_tag=NLI98_RS07970;product=xylulokinase;protein_id=WP_088498411.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1645871 1647148 . + . ID=gene-NLI98_RS07975;Name=dalT;gbkey=Gene;gene=dalT;gene_biotype=protein_coding;locus_tag=NLI98_RS07975;old_locus_tag=NLI98_07970 NZ_CP100601.1 Protein Homology CDS 1645871 1647148 . + 0 ID=cds-WP_004175125.1;Parent=gene-NLI98_RS07975;Dbxref=Genbank:WP_004175125.1;Name=WP_004175125.1;gbkey=CDS;gene=dalT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227901.1;locus_tag=NLI98_RS07975;product=D-arabinitol transporter;protein_id=WP_004175125.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1647197 1647859 . + . ID=gene-NLI98_RS07980;Name=NLI98_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07980;old_locus_tag=NLI98_07975 NZ_CP100601.1 Protein Homology CDS 1647197 1647859 . + 0 ID=cds-WP_004175126.1;Parent=gene-NLI98_RS07980;Dbxref=Genbank:WP_004175126.1;Name=WP_004175126.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227900.1;locus_tag=NLI98_RS07980;product=HAD-IA family hydrolase;protein_id=WP_004175126.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1648157 1649311 . + . ID=gene-NLI98_RS07985;Name=NLI98_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07985;old_locus_tag=NLI98_07980 NZ_CP100601.1 Protein Homology CDS 1648157 1649311 . + 0 ID=cds-WP_002912648.1;Parent=gene-NLI98_RS07985;Dbxref=Genbank:WP_002912648.1;Name=WP_002912648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227899.1;locus_tag=NLI98_RS07985;product=mandelate racemase family protein;protein_id=WP_002912648.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1649431 1651053 . + . ID=gene-NLI98_RS07990;Name=NLI98_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07990;old_locus_tag=NLI98_07985 NZ_CP100601.1 Protein Homology CDS 1649431 1651053 . + 0 ID=cds-WP_004180553.1;Parent=gene-NLI98_RS07990;Dbxref=Genbank:WP_004180553.1;Name=WP_004180553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227898.1;locus_tag=NLI98_RS07990;product=ABC transporter substrate-binding protein;protein_id=WP_004180553.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1651050 1652087 . + . ID=gene-NLI98_RS07995;Name=NLI98_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS07995;old_locus_tag=NLI98_07990 NZ_CP100601.1 Protein Homology CDS 1651050 1652087 . + 0 ID=cds-WP_004149062.1;Parent=gene-NLI98_RS07995;Dbxref=Genbank:WP_004149062.1;Name=WP_004149062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227897.1;locus_tag=NLI98_RS07995;product=ABC transporter permease;protein_id=WP_004149062.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1652084 1652989 . + . ID=gene-NLI98_RS08000;Name=NLI98_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08000;old_locus_tag=NLI98_07995 NZ_CP100601.1 Protein Homology CDS 1652084 1652989 . + 0 ID=cds-WP_088498410.1;Parent=gene-NLI98_RS08000;Dbxref=Genbank:WP_088498410.1;Name=WP_088498410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227896.1;locus_tag=NLI98_RS08000;product=ABC transporter permease;protein_id=WP_088498410.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1652961 1653824 . + . ID=gene-NLI98_RS08005;Name=NLI98_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08005;old_locus_tag=NLI98_08000 NZ_CP100601.1 Protein Homology CDS 1652961 1653824 . + 0 ID=cds-WP_004175147.1;Parent=gene-NLI98_RS08005;Dbxref=Genbank:WP_004175147.1;Name=WP_004175147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227895.1;locus_tag=NLI98_RS08005;product=ABC transporter ATP-binding protein;protein_id=WP_004175147.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1653835 1654608 . + . ID=gene-NLI98_RS08010;Name=NLI98_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08010;old_locus_tag=NLI98_08005 NZ_CP100601.1 Protein Homology CDS 1653835 1654608 . + 0 ID=cds-WP_088498409.1;Parent=gene-NLI98_RS08010;Dbxref=Genbank:WP_088498409.1;Name=WP_088498409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227894.1;locus_tag=NLI98_RS08010;product=ABC transporter ATP-binding protein;protein_id=WP_088498409.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1654849 1655745 . - . ID=gene-NLI98_RS08015;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=NLI98_RS08015;old_locus_tag=NLI98_08010 NZ_CP100601.1 Protein Homology CDS 1654849 1655745 . - 0 ID=cds-WP_004151134.1;Parent=gene-NLI98_RS08015;Dbxref=Genbank:WP_004151134.1;Name=WP_004151134.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227893.1;locus_tag=NLI98_RS08015;product=lipid kinase YegS;protein_id=WP_004151134.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1655988 1657349 . - . ID=gene-NLI98_RS08020;Name=yegQ;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=NLI98_RS08020;old_locus_tag=NLI98_08015 NZ_CP100601.1 Protein Homology CDS 1655988 1657349 . - 0 ID=cds-WP_004144192.1;Parent=gene-NLI98_RS08020;Dbxref=Genbank:WP_004144192.1;Name=WP_004144192.1;gbkey=CDS;gene=yegQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227892.1;locus_tag=NLI98_RS08020;product=tRNA 5-hydroxyuridine modification protein YegQ;protein_id=WP_004144192.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1657668 1658390 . - . ID=gene-NLI98_RS08025;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=NLI98_RS08025;old_locus_tag=NLI98_08020 NZ_CP100601.1 Protein Homology CDS 1657668 1658390 . - 0 ID=cds-WP_004175198.1;Parent=gene-NLI98_RS08025;Dbxref=Genbank:WP_004175198.1;Name=WP_004175198.1;Ontology_term=GO:0000160,GO:0003677;gbkey=CDS;gene=baeR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227891.1;locus_tag=NLI98_RS08025;product=two-component system response regulator BaeR;protein_id=WP_004175198.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1658387 1659865 . - . ID=gene-NLI98_RS08030;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=NLI98_RS08030;old_locus_tag=NLI98_08025 NZ_CP100601.1 Protein Homology CDS 1658387 1659865 . - 0 ID=cds-WP_004149058.1;Parent=gene-NLI98_RS08030;Dbxref=Genbank:WP_004149058.1;Name=WP_004149058.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227890.1;locus_tag=NLI98_RS08030;product=two-component system sensor histidine kinase BaeS;protein_id=WP_004149058.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1659862 1661277 . - . ID=gene-NLI98_RS08035;Name=NLI98_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08035;old_locus_tag=NLI98_08030 NZ_CP100601.1 Protein Homology CDS 1659862 1661277 . - 0 ID=cds-WP_088498408.1;Parent=gene-NLI98_RS08035;Dbxref=Genbank:WP_088498408.1;Name=WP_088498408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227889.1;locus_tag=NLI98_RS08035;product=MFS transporter;protein_id=WP_088498408.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1661279 1664356 . - . ID=gene-NLI98_RS08040;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=NLI98_RS08040;old_locus_tag=NLI98_08035 NZ_CP100601.1 Protein Homology CDS 1661279 1664356 . - 0 ID=cds-WP_002912617.1;Parent=gene-NLI98_RS08040;Dbxref=Genbank:WP_002912617.1;Name=WP_002912617.1;Ontology_term=GO:0055085;gbkey=CDS;gene=mdtC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227888.1;locus_tag=NLI98_RS08040;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_002912617.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1664357 1667479 . - . ID=gene-NLI98_RS08045;Name=NLI98_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08045;old_locus_tag=NLI98_08040 NZ_CP100601.1 Protein Homology CDS 1664357 1667479 . - 0 ID=cds-WP_004149055.1;Parent=gene-NLI98_RS08045;Dbxref=Genbank:WP_004149055.1;Name=WP_004149055.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227887.1;locus_tag=NLI98_RS08045;product=MdtB/MuxB family multidrug efflux RND transporter permease subunit;protein_id=WP_004149055.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1667479 1668717 . - . ID=gene-NLI98_RS08050;Name=NLI98_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08050;old_locus_tag=NLI98_08045 NZ_CP100601.1 Protein Homology CDS 1667479 1668717 . - 0 ID=cds-WP_023287841.1;Parent=gene-NLI98_RS08050;Dbxref=Genbank:WP_023287841.1;Name=WP_023287841.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227886.1;locus_tag=NLI98_RS08050;product=MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit;protein_id=WP_023287841.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1669018 1670292 . + . ID=gene-NLI98_RS08055;Name=NLI98_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08055;old_locus_tag=NLI98_08050 NZ_CP100601.1 Protein Homology CDS 1669018 1670292 . + 0 ID=cds-WP_004149053.1;Parent=gene-NLI98_RS08055;Dbxref=Genbank:WP_004149053.1;Name=WP_004149053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804082.1;locus_tag=NLI98_RS08055;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_004149053.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1670566 1671177 . - . ID=gene-NLI98_RS08060;Name=NLI98_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08060;old_locus_tag=NLI98_08055 NZ_CP100601.1 Protein Homology CDS 1670566 1671177 . - 0 ID=cds-WP_009483956.1;Parent=gene-NLI98_RS08060;Dbxref=Genbank:WP_009483956.1;Name=WP_009483956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227884.1;locus_tag=NLI98_RS08060;product=response regulator transcription factor;protein_id=WP_009483956.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1671321 1671401 . - . ID=gene-NLI98_RS08065;Name=NLI98_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08065;old_locus_tag=NLI98_08060 NZ_CP100601.1 Protein Homology CDS 1671321 1671401 . - 0 ID=cds-WP_228761491.1;Parent=gene-NLI98_RS08065;Dbxref=Genbank:WP_228761491.1;Name=WP_228761491.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033853.2;locus_tag=NLI98_RS08065;product=hypothetical protein;protein_id=WP_228761491.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1671671 1672372 . - . ID=gene-NLI98_RS08070;Name=NLI98_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08070;old_locus_tag=NLI98_08065 NZ_CP100601.1 Protein Homology CDS 1671671 1672372 . - 0 ID=cds-WP_004151141.1;Parent=gene-NLI98_RS08070;Dbxref=Genbank:WP_004151141.1;Name=WP_004151141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227882.1;locus_tag=NLI98_RS08070;product=response regulator transcription factor;protein_id=WP_004151141.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1672387 1674243 . - . ID=gene-NLI98_RS08075;Name=NLI98_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08075;old_locus_tag=NLI98_08070 NZ_CP100601.1 Protein Homology CDS 1672387 1674243 . - 0 ID=cds-WP_004175214.1;Parent=gene-NLI98_RS08075;Dbxref=Genbank:WP_004175214.1;Name=WP_004175214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227881.1;locus_tag=NLI98_RS08075;product=sensor histidine kinase;protein_id=WP_004175214.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1674533 1675885 . - . ID=gene-NLI98_RS08080;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=NLI98_RS08080;old_locus_tag=NLI98_08075 NZ_CP100601.1 Protein Homology CDS 1674533 1675885 . - 0 ID=cds-WP_086544461.1;Parent=gene-NLI98_RS08080;Dbxref=Genbank:WP_086544461.1;Name=WP_086544461.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461070.1;locus_tag=NLI98_RS08080;product=molecular chaperone;protein_id=WP_086544461.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1676023 1676871 . + . ID=gene-NLI98_RS08085;Name=alkA;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=NLI98_RS08085;old_locus_tag=NLI98_08080 NZ_CP100601.1 Protein Homology CDS 1676023 1676871 . + 0 ID=cds-WP_086544460.1;Parent=gene-NLI98_RS08085;Dbxref=Genbank:WP_086544460.1;Name=WP_086544460.1;Ontology_term=GO:0006281,GO:0003824;gbkey=CDS;gene=alkA;go_function=catalytic activity|0003824||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227879.1;locus_tag=NLI98_RS08085;product=DNA-3-methyladenine glycosylase 2;protein_id=WP_086544460.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1676986 1677627 . + . ID=gene-NLI98_RS08090;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=NLI98_RS08090;old_locus_tag=NLI98_08085 NZ_CP100601.1 Protein Homology CDS 1676986 1677627 . + 0 ID=cds-WP_002912442.1;Parent=gene-NLI98_RS08090;Dbxref=Genbank:WP_002912442.1;Name=WP_002912442.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211872.1;locus_tag=NLI98_RS08090;product=uridine kinase;protein_id=WP_002912442.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1677718 1678299 . + . ID=gene-NLI98_RS08095;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=NLI98_RS08095;old_locus_tag=NLI98_08090 NZ_CP100601.1 Protein Homology CDS 1677718 1678299 . + 0 ID=cds-WP_004151145.1;Parent=gene-NLI98_RS08095;Dbxref=Genbank:WP_004151145.1;Name=WP_004151145.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=NLI98_RS08095;product=dCTP deaminase;protein_id=WP_004151145.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1678330 1680177 . + . ID=gene-NLI98_RS08100;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=NLI98_RS08100;old_locus_tag=NLI98_08095 NZ_CP100601.1 Protein Homology CDS 1678330 1680177 . + 0 ID=cds-WP_004180531.1;Parent=gene-NLI98_RS08100;Dbxref=Genbank:WP_004180531.1;Name=WP_004180531.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002912440.1;locus_tag=NLI98_RS08100;product=outer membrane assembly protein AsmA;protein_id=WP_004180531.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1680815 1682398 . - . ID=gene-NLI98_RS08105;Name=NLI98_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08105;old_locus_tag=NLI98_08100 NZ_CP100601.1 Protein Homology CDS 1680815 1682398 . - 0 ID=cds-WP_004151147.1;Parent=gene-NLI98_RS08105;Dbxref=Genbank:WP_004151147.1;Name=WP_004151147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227875.1;locus_tag=NLI98_RS08105;product=TerC family protein;protein_id=WP_004151147.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1683158 1684086 . + . ID=gene-NLI98_RS08110;Name=galF;gbkey=Gene;gene=galF;gene_biotype=pseudogene;locus_tag=NLI98_RS08110;old_locus_tag=NLI98_08105;pseudo=true NZ_CP100601.1 Protein Homology CDS 1683158 1684086 . + 0 ID=cds-NLI98_RS08110;Parent=gene-NLI98_RS08110;Note=frameshifted;Ontology_term=GO:0009225,GO:0030234;gbkey=CDS;gene=galF;go_function=enzyme regulator activity|0030234||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227874.1;locus_tag=NLI98_RS08110;product=GalU regulator GalF;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 1684447 1685076 . + . ID=gene-NLI98_RS08115;Name=NLI98_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08115;old_locus_tag=NLI98_08110 NZ_CP100601.1 Protein Homology CDS 1684447 1685076 . + 0 ID=cds-WP_088498174.1;Parent=gene-NLI98_RS08115;Dbxref=Genbank:WP_088498174.1;Name=WP_088498174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227873.1;locus_tag=NLI98_RS08115;product=phosphatase PAP2 family protein;protein_id=WP_088498174.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1685623 1685745 . - . ID=gene-NLI98_RS08120;Name=NLI98_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08120;old_locus_tag=NLI98_08115 NZ_CP100601.1 Protein Homology CDS 1685623 1685745 . - 0 ID=cds-WP_032422236.1;Parent=gene-NLI98_RS08120;Dbxref=Genbank:WP_032422236.1;Name=WP_032422236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227871.1;locus_tag=NLI98_RS08120;product=hypothetical protein;protein_id=WP_032422236.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1686036 1687469 . + . ID=gene-NLI98_RS08125;Name=NLI98_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08125;old_locus_tag=NLI98_08120 NZ_CP100601.1 Protein Homology CDS 1686036 1687469 . + 0 ID=cds-WP_021469654.1;Parent=gene-NLI98_RS08125;Dbxref=Genbank:WP_021469654.1;Name=WP_021469654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227870.1;locus_tag=NLI98_RS08125;product=capsule assembly Wzi family protein;protein_id=WP_021469654.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1687615 1688748 . + . ID=gene-NLI98_RS08130;Name=NLI98_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08130;old_locus_tag=NLI98_08125 NZ_CP100601.1 Protein Homology CDS 1687615 1688748 . + 0 ID=cds-WP_021469653.1;Parent=gene-NLI98_RS08130;Dbxref=Genbank:WP_021469653.1;Name=WP_021469653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001775085.1;locus_tag=NLI98_RS08130;product=polysaccharide export protein;protein_id=WP_021469653.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1688753 1689187 . + . ID=gene-NLI98_RS08135;Name=NLI98_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08135;old_locus_tag=NLI98_08130 NZ_CP100601.1 Protein Homology CDS 1688753 1689187 . + 0 ID=cds-WP_071785244.1;Parent=gene-NLI98_RS08135;Dbxref=Genbank:WP_071785244.1;Name=WP_071785244.1;Note=Wzb shows phosphatase activity towards the autophosphorylated Wzc protein%2C which induces colanic acid biosynthesis%3B catalyzes the phosphorylation of UDP-glucose dehydrogenase%2C an enzyme involved in colanic acid biosynthesis;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001518055.1;locus_tag=NLI98_RS08135;product=protein tyrosine phosphatase;protein_id=WP_071785244.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1689202 1691352 . + . ID=gene-NLI98_RS08140;Name=NLI98_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08140;old_locus_tag=NLI98_08135 NZ_CP100601.1 Protein Homology CDS 1689202 1691352 . + 0 ID=cds-WP_023304928.1;Parent=gene-NLI98_RS08140;Dbxref=Genbank:WP_023304928.1;Name=WP_023304928.1;Ontology_term=GO:0045226;gbkey=CDS;go_process=extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227868.1;locus_tag=NLI98_RS08140;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_023304928.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1691426 1692637 . + . ID=gene-NLI98_RS08145;Name=NLI98_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08145;old_locus_tag=NLI98_08140 NZ_CP100601.1 Protein Homology CDS 1691426 1692637 . + 0 ID=cds-WP_225517273.1;Parent=gene-NLI98_RS08145;Dbxref=Genbank:WP_225517273.1;Name=WP_225517273.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014051.2;locus_tag=NLI98_RS08145;product=polysaccharide biosynthesis C-terminal domain-containing protein;protein_id=WP_225517273.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1692634 1693944 . + . ID=gene-NLI98_RS08150;Name=NLI98_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08150;old_locus_tag=NLI98_08145 NZ_CP100601.1 GeneMarkS-2+ CDS 1692634 1693944 . + 0 ID=cds-WP_023304926.1;Parent=gene-NLI98_RS08150;Dbxref=Genbank:WP_023304926.1;Name=WP_023304926.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS08150;product=oligosaccharide repeat unit polymerase;protein_id=WP_023304926.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1693957 1695087 . + . ID=gene-NLI98_RS08155;Name=NLI98_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08155;old_locus_tag=NLI98_08150 NZ_CP100601.1 Protein Homology CDS 1693957 1695087 . + 0 ID=cds-WP_021469649.1;Parent=gene-NLI98_RS08155;Dbxref=Genbank:WP_021469649.1;Name=WP_021469649.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.2;locus_tag=NLI98_RS08155;product=glycosyltransferase family 4 protein;protein_id=WP_021469649.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1695209 1695613 . + . ID=gene-NLI98_RS08160;Name=NLI98_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08160;old_locus_tag=NLI98_08155 NZ_CP100601.1 Protein Homology CDS 1695209 1695613 . + 0 ID=cds-WP_021469648.1;Parent=gene-NLI98_RS08160;Dbxref=Genbank:WP_021469648.1;Name=WP_021469648.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012360.2;locus_tag=NLI98_RS08160;product=DapH/DapD/GlmU-related protein;protein_id=WP_021469648.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1695606 1696148 . + . ID=gene-NLI98_RS08165;Name=NLI98_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08165;old_locus_tag=NLI98_08160 NZ_CP100601.1 Protein Homology CDS 1695606 1696148 . + 0 ID=cds-WP_021469647.1;Parent=gene-NLI98_RS08165;Dbxref=Genbank:WP_021469647.1;Name=WP_021469647.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012360.2;locus_tag=NLI98_RS08165;product=putative colanic acid biosynthesis acetyltransferase;protein_id=WP_021469647.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1696141 1697067 . + . ID=gene-NLI98_RS08170;Name=NLI98_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08170;old_locus_tag=NLI98_08165 NZ_CP100601.1 Protein Homology CDS 1696141 1697067 . + 0 ID=cds-WP_023304923.1;Parent=gene-NLI98_RS08170;Dbxref=Genbank:WP_023304923.1;Name=WP_023304923.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.2;locus_tag=NLI98_RS08170;product=glycosyltransferase family 2 protein;protein_id=WP_023304923.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1697075 1698193 . + . ID=gene-NLI98_RS08175;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=NLI98_RS08175;old_locus_tag=NLI98_08170 NZ_CP100601.1 Protein Homology CDS 1697075 1698193 . + 0 ID=cds-WP_021469645.1;Parent=gene-NLI98_RS08175;Dbxref=Genbank:WP_021469645.1;Name=WP_021469645.1;Ontology_term=GO:0000271,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000549035.1;locus_tag=NLI98_RS08175;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_021469645.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1698199 1699167 . + . ID=gene-NLI98_RS08180;Name=NLI98_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08180;old_locus_tag=NLI98_08175 NZ_CP100601.1 Protein Homology CDS 1698199 1699167 . + 0 ID=cds-WP_021469644.1;Parent=gene-NLI98_RS08180;Dbxref=Genbank:WP_021469644.1;Name=WP_021469644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244813.1;locus_tag=NLI98_RS08180;product=GDP-L-fucose synthase;protein_id=WP_021469644.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1699169 1699627 . + . ID=gene-NLI98_RS08185;Name=NLI98_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08185;old_locus_tag=NLI98_08180 NZ_CP100601.1 Protein Homology CDS 1699169 1699627 . + 0 ID=cds-WP_021469643.1;Parent=gene-NLI98_RS08185;Dbxref=Genbank:WP_021469643.1;Name=WP_021469643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000477985.1;locus_tag=NLI98_RS08185;product=GDP-mannose mannosyl hydrolase;protein_id=WP_021469643.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1699639 1700853 . + . ID=gene-NLI98_RS08190;Name=NLI98_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08190;old_locus_tag=NLI98_08185 NZ_CP100601.1 Protein Homology CDS 1699639 1700853 . + 0 ID=cds-WP_023304922.1;Parent=gene-NLI98_RS08190;Dbxref=Genbank:WP_023304922.1;Name=WP_023304922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000772250.1;locus_tag=NLI98_RS08190;product=glycosyltransferase WbuB;protein_id=WP_023304922.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1701160 1702563 . + . ID=gene-NLI98_RS08195;Name=wcaJ;gbkey=Gene;gene=wcaJ;gene_biotype=protein_coding;locus_tag=NLI98_RS08195;old_locus_tag=NLI98_08190 NZ_CP100601.1 Protein Homology CDS 1701160 1702563 . + 0 ID=cds-WP_021469641.1;Parent=gene-NLI98_RS08195;Dbxref=Genbank:WP_021469641.1;Name=WP_021469641.1;gbkey=CDS;gene=wcaJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014907232.1;locus_tag=NLI98_RS08195;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_021469641.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1702727 1704133 . + . ID=gene-NLI98_RS08200;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=NLI98_RS08200;old_locus_tag=NLI98_08195 NZ_CP100601.1 Protein Homology CDS 1702727 1704133 . + 0 ID=cds-WP_088498063.1;Parent=gene-NLI98_RS08200;Dbxref=Genbank:WP_088498063.1;Name=WP_088498063.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227859.1;locus_tag=NLI98_RS08200;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_088498063.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1704316 1706226 . + . ID=gene-NLI98_RS08205;Name=NLI98_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08205;old_locus_tag=NLI98_08200 NZ_CP100601.1 Protein Homology CDS 1704316 1706226 . + 0 ID=cds-WP_023317558.1;Parent=gene-NLI98_RS08205;Dbxref=Genbank:WP_023317558.1;Name=WP_023317558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001081817.1;locus_tag=NLI98_RS08205;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_023317558.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1706516 1707931 . + . ID=gene-NLI98_RS08210;Name=NLI98_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08210;old_locus_tag=NLI98_08205 NZ_CP100601.1 Protein Homology CDS 1706516 1707931 . + 0 ID=cds-WP_023304920.1;Parent=gene-NLI98_RS08210;Dbxref=Genbank:WP_023304920.1;Name=WP_023304920.1;Ontology_term=GO:0009103,GO:0004476;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019725197.1;locus_tag=NLI98_RS08210;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_023304920.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1707954 1709324 . + . ID=gene-NLI98_RS08215;Name=rfbK1;gbkey=Gene;gene=rfbK1;gene_biotype=protein_coding;locus_tag=NLI98_RS08215;old_locus_tag=NLI98_08210 NZ_CP100601.1 Protein Homology CDS 1707954 1709324 . + 0 ID=cds-WP_023304919.1;Parent=gene-NLI98_RS08215;Dbxref=Genbank:WP_023304919.1;Name=WP_023304919.1;gbkey=CDS;gene=rfbK1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032248255.1;locus_tag=NLI98_RS08215;product=O9 family phosphomannomutase RfbK1;protein_id=WP_023304919.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1709488 1710654 . + . ID=gene-NLI98_RS08220;Name=ugd;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=NLI98_RS08220;old_locus_tag=NLI98_08215 NZ_CP100601.1 Protein Homology CDS 1709488 1710654 . + 0 ID=cds-WP_088498064.1;Parent=gene-NLI98_RS08220;Dbxref=Genbank:WP_088498064.1;Name=WP_088498064.1;Ontology_term=GO:0000271,GO:0003979;gbkey=CDS;gene=ugd;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227854.1;locus_tag=NLI98_RS08220;product=UDP-glucose 6-dehydrogenase;protein_id=WP_088498064.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1711079 1711201 . - . ID=gene-NLI98_RS08225;Name=NLI98_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08225;old_locus_tag=NLI98_08220 NZ_CP100601.1 Protein Homology CDS 1711079 1711201 . - 0 ID=cds-WP_004144151.1;Parent=gene-NLI98_RS08225;Dbxref=Genbank:WP_004144151.1;Name=WP_004144151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227853.1;locus_tag=NLI98_RS08225;product=small membrane protein;protein_id=WP_004144151.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1711602 1712606 . - . ID=gene-NLI98_RS08230;Name=NLI98_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08230;old_locus_tag=NLI98_08225 NZ_CP100601.1 Protein Homology CDS 1711602 1712606 . - 0 ID=cds-WP_004184806.1;Parent=gene-NLI98_RS08230;Dbxref=Genbank:WP_004184806.1;Name=WP_004184806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227851.1;locus_tag=NLI98_RS08230;product=NAD-dependent epimerase;protein_id=WP_004184806.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1713652 1714419 . + . ID=gene-NLI98_RS08235;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=NLI98_RS08235;old_locus_tag=NLI98_08230 NZ_CP100601.1 Protein Homology CDS 1713652 1714419 . + 0 ID=cds-WP_002912373.1;Parent=gene-NLI98_RS08235;Dbxref=Genbank:WP_002912373.1;Name=WP_002912373.1;gbkey=CDS;gene=rfbA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227850.1;locus_tag=NLI98_RS08235;product=O-antigen export ABC transporter permease RfbA;protein_id=WP_002912373.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1714419 1715159 . + . ID=gene-NLI98_RS08240;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=NLI98_RS08240;old_locus_tag=NLI98_08235 NZ_CP100601.1 Protein Homology CDS 1714419 1715159 . + 0 ID=cds-WP_004175264.1;Parent=gene-NLI98_RS08240;Dbxref=Genbank:WP_004175264.1;Name=WP_004175264.1;gbkey=CDS;gene=rfbB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227849.1;locus_tag=NLI98_RS08240;product=O-antigen export ABC transporter ATP-binding protein RfbB;protein_id=WP_004175264.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1715175 1717070 . + . ID=gene-NLI98_RS08245;Name=NLI98_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08245;old_locus_tag=NLI98_08240 NZ_CP100601.1 Protein Homology CDS 1715175 1717070 . + 0 ID=cds-WP_088498065.1;Parent=gene-NLI98_RS08245;Dbxref=Genbank:WP_088498065.1;Name=WP_088498065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804132.1;locus_tag=NLI98_RS08245;product=DUF4422 domain-containing protein;protein_id=WP_088498065.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1717086 1718240 . + . ID=gene-NLI98_RS08250;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=NLI98_RS08250;old_locus_tag=NLI98_08245 NZ_CP100601.1 Protein Homology CDS 1717086 1718240 . + 0 ID=cds-WP_023304918.1;Parent=gene-NLI98_RS08250;Dbxref=Genbank:WP_023304918.1;Name=WP_023304918.1;gbkey=CDS;gene=rfbD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_023284018.1;locus_tag=NLI98_RS08250;product=UDP-galactopyranose mutase;protein_id=WP_023304918.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1718237 1719130 . + . ID=gene-NLI98_RS08255;Name=NLI98_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08255;old_locus_tag=NLI98_08250 NZ_CP100601.1 Protein Homology CDS 1718237 1719130 . + 0 ID=cds-WP_004890862.1;Parent=gene-NLI98_RS08255;Dbxref=Genbank:WP_004890862.1;Name=WP_004890862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227846.1;locus_tag=NLI98_RS08255;product=glycosyltransferase;protein_id=WP_004890862.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1719131 1720276 . + . ID=gene-NLI98_RS08260;Name=NLI98_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08260;old_locus_tag=NLI98_08255 NZ_CP100601.1 Protein Homology CDS 1719131 1720276 . + 0 ID=cds-WP_025983080.1;Parent=gene-NLI98_RS08260;Dbxref=Genbank:WP_025983080.1;Name=WP_025983080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227845.1;locus_tag=NLI98_RS08260;product=glycosyltransferase family 4 protein;protein_id=WP_025983080.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1720399 1721715 . + . ID=gene-NLI98_RS08265;Name=NLI98_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08265;old_locus_tag=NLI98_08260 NZ_CP100601.1 Protein Homology CDS 1720399 1721715 . + 0 ID=cds-WP_004214010.1;Parent=gene-NLI98_RS08265;Dbxref=Genbank:WP_004214010.1;Name=WP_004214010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227844.1;locus_tag=NLI98_RS08265;product=glycosyltransferase;protein_id=WP_004214010.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1721819 1722418 . - . ID=gene-NLI98_RS08270;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=NLI98_RS08270;old_locus_tag=NLI98_08265 NZ_CP100601.1 Protein Homology CDS 1721819 1722418 . - 0 ID=cds-WP_004200374.1;Parent=gene-NLI98_RS08270;Dbxref=Genbank:WP_004200374.1;Name=WP_004200374.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227843.1;locus_tag=NLI98_RS08270;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_004200374.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1722412 1723188 . - . ID=gene-NLI98_RS08275;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=NLI98_RS08275;old_locus_tag=NLI98_08270 NZ_CP100601.1 Protein Homology CDS 1722412 1723188 . - 0 ID=cds-WP_004180497.1;Parent=gene-NLI98_RS08275;Dbxref=Genbank:WP_004180497.1;Name=WP_004180497.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227842.1;locus_tag=NLI98_RS08275;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_004180497.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1723170 1723907 . - . ID=gene-NLI98_RS08280;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=NLI98_RS08280;old_locus_tag=NLI98_08275 NZ_CP100601.1 Protein Homology CDS 1723170 1723907 . - 0 ID=cds-WP_019705192.1;Parent=gene-NLI98_RS08280;Dbxref=Genbank:WP_019705192.1;Name=WP_019705192.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227841.1;locus_tag=NLI98_RS08280;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_019705192.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1723907 1724497 . - . ID=gene-NLI98_RS08285;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=NLI98_RS08285;old_locus_tag=NLI98_08280 NZ_CP100601.1 Protein Homology CDS 1723907 1724497 . - 0 ID=cds-WP_002912227.1;Parent=gene-NLI98_RS08285;Dbxref=Genbank:WP_002912227.1;Name=WP_002912227.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128083.1;locus_tag=NLI98_RS08285;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_002912227.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1724497 1725564 . - . ID=gene-NLI98_RS08290;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=NLI98_RS08290;old_locus_tag=NLI98_08285 NZ_CP100601.1 Protein Homology CDS 1724497 1725564 . - 0 ID=cds-WP_004184786.1;Parent=gene-NLI98_RS08290;Dbxref=Genbank:WP_004184786.1;Name=WP_004184786.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227839.1;locus_tag=NLI98_RS08290;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_004184786.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1725561 1726622 . - . ID=gene-NLI98_RS08295;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=NLI98_RS08295;old_locus_tag=NLI98_08290 NZ_CP100601.1 Protein Homology CDS 1725561 1726622 . - 0 ID=cds-WP_004149000.1;Parent=gene-NLI98_RS08295;Dbxref=Genbank:WP_004149000.1;Name=WP_004149000.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227838.1;locus_tag=NLI98_RS08295;product=histidinol-phosphate transaminase;protein_id=WP_004149000.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1726619 1727923 . - . ID=gene-NLI98_RS08300;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=NLI98_RS08300;old_locus_tag=NLI98_08295 NZ_CP100601.1 Protein Homology CDS 1726619 1727923 . - 0 ID=cds-WP_021440428.1;Parent=gene-NLI98_RS08300;Dbxref=Genbank:WP_021440428.1;Name=WP_021440428.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227837.1;locus_tag=NLI98_RS08300;product=histidinol dehydrogenase;protein_id=WP_021440428.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1727963 1728862 . - . ID=gene-NLI98_RS08305;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=NLI98_RS08305;old_locus_tag=NLI98_08300 NZ_CP100601.1 Protein Homology CDS 1727963 1728862 . - 0 ID=cds-WP_002912152.1;Parent=gene-NLI98_RS08305;Dbxref=Genbank:WP_002912152.1;Name=WP_002912152.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=NLI98_RS08305;product=ATP phosphoribosyltransferase;protein_id=WP_002912152.1;transl_table=11 NZ_CP100601.1 cmsearch sequence_feature 1728910 1729032 . - . ID=id-NZ_CP100601.1:1728910..1729032;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP100601.1 RefSeq gene 1729008 1729058 . - . ID=gene-NLI98_RS08310;Name=hisL;gbkey=Gene;gene=hisL;gene_biotype=protein_coding;locus_tag=NLI98_RS08310;old_locus_tag=NLI98_08305 NZ_CP100601.1 Protein Homology CDS 1729008 1729058 . - 0 ID=cds-WP_004899375.1;Parent=gene-NLI98_RS08310;Dbxref=Genbank:WP_004899375.1;Name=WP_004899375.1;Ontology_term=GO:0000105;gbkey=CDS;gene=hisL;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416522.1;locus_tag=NLI98_RS08310;product=his operon leader peptide;protein_id=WP_004899375.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1729235 1730059 . + . ID=gene-NLI98_RS08315;Name=NLI98_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08315;old_locus_tag=NLI98_08310 NZ_CP100601.1 Protein Homology CDS 1729235 1730059 . + 0 ID=cds-WP_023317560.1;Parent=gene-NLI98_RS08315;Dbxref=Genbank:WP_023317560.1;Name=WP_023317560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227835.1;locus_tag=NLI98_RS08315;product=SDR family oxidoreductase;protein_id=WP_023317560.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1730099 1730989 . + . ID=gene-NLI98_RS08320;Name=NLI98_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08320;old_locus_tag=NLI98_08315 NZ_CP100601.1 Protein Homology CDS 1730099 1730989 . + 0 ID=cds-WP_023304916.1;Parent=gene-NLI98_RS08320;Dbxref=Genbank:WP_023304916.1;Name=WP_023304916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227834.1;locus_tag=NLI98_RS08320;product=LysR family transcriptional regulator;protein_id=WP_023304916.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1731279 1732637 . + . ID=gene-NLI98_RS08325;Name=plaP;gbkey=Gene;gene=plaP;gene_biotype=protein_coding;locus_tag=NLI98_RS08325;old_locus_tag=NLI98_08320 NZ_CP100601.1 Protein Homology CDS 1731279 1732637 . + 0 ID=cds-WP_004148994.1;Parent=gene-NLI98_RS08325;Dbxref=Genbank:WP_004148994.1;Name=WP_004148994.1;gbkey=CDS;gene=plaP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227833.1;locus_tag=NLI98_RS08325;product=putrescine/proton symporter PlaP;protein_id=WP_004148994.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1732820 1733131 . - . ID=gene-NLI98_RS08330;Name=NLI98_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08330;old_locus_tag=NLI98_08325 NZ_CP100601.1 Protein Homology CDS 1732820 1733131 . - 0 ID=cds-WP_002912109.1;Parent=gene-NLI98_RS08330;Dbxref=Genbank:WP_002912109.1;Name=WP_002912109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227832.1;locus_tag=NLI98_RS08330;product=helix-turn-helix domain-containing protein;protein_id=WP_002912109.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1733371 1735473 . + . ID=gene-NLI98_RS08335;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=NLI98_RS08335;old_locus_tag=NLI98_08330 NZ_CP100601.1 Protein Homology CDS 1733371 1735473 . + 0 ID=cds-WP_023304915.1;Parent=gene-NLI98_RS08335;Dbxref=Genbank:WP_023304915.1;Name=WP_023304915.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227831.1;locus_tag=NLI98_RS08335;product=elongation factor G;protein_id=WP_023304915.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1735697 1737121 . - . ID=gene-NLI98_RS08340;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=NLI98_RS08340;old_locus_tag=NLI98_08335 NZ_CP100601.1 Protein Homology CDS 1735697 1737121 . - 0 ID=cds-WP_023304914.1;Parent=gene-NLI98_RS08340;Dbxref=Genbank:WP_023304914.1;Name=WP_023304914.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008852;gbkey=CDS;gene=sbcB;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,exodeoxyribonuclease I activity|0008852||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227830.1;locus_tag=NLI98_RS08340;product=exodeoxyribonuclease I;protein_id=WP_023304914.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1737302 1738465 . + . ID=gene-NLI98_RS08345;Name=dacD;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=NLI98_RS08345;old_locus_tag=NLI98_08340 NZ_CP100601.1 Protein Homology CDS 1737302 1738465 . + 0 ID=cds-WP_004153104.1;Parent=gene-NLI98_RS08345;Dbxref=Genbank:WP_004153104.1;Name=WP_004153104.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacD;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004153104.1;locus_tag=NLI98_RS08345;product=serine-type D-Ala-D-Ala carboxypeptidase DacD;protein_id=WP_004153104.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1738641 1739114 . + . ID=gene-NLI98_RS08350;Name=sbmC;gbkey=Gene;gene=sbmC;gene_biotype=protein_coding;locus_tag=NLI98_RS08350;old_locus_tag=NLI98_08345 NZ_CP100601.1 Protein Homology CDS 1738641 1739114 . + 0 ID=cds-WP_019705187.1;Parent=gene-NLI98_RS08350;Dbxref=Genbank:WP_019705187.1;Name=WP_019705187.1;gbkey=CDS;gene=sbmC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227827.1;locus_tag=NLI98_RS08350;product=DNA gyrase inhibitor SbmC;protein_id=WP_019705187.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1739213 1740271 . + . ID=gene-NLI98_RS08355;Name=NLI98_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08355;old_locus_tag=NLI98_08350 NZ_CP100601.1 Protein Homology CDS 1739213 1740271 . + 0 ID=cds-WP_002911885.1;Parent=gene-NLI98_RS08355;Dbxref=Genbank:WP_002911885.1;Name=WP_002911885.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227826.1;locus_tag=NLI98_RS08355;product=FUSC family protein;protein_id=WP_002911885.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1740439 1740762 . + . ID=gene-NLI98_RS08360;Name=NLI98_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08360;old_locus_tag=NLI98_08355 NZ_CP100601.1 Protein Homology CDS 1740439 1740762 . + 0 ID=cds-WP_002911883.1;Parent=gene-NLI98_RS08360;Dbxref=Genbank:WP_002911883.1;Name=WP_002911883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002911883.1;locus_tag=NLI98_RS08360;product=DUF496 family protein;protein_id=WP_002911883.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1741077 1741817 . + . ID=gene-NLI98_RS08365;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=NLI98_RS08365;old_locus_tag=NLI98_08360 NZ_CP100601.1 Protein Homology CDS 1741077 1741817 . + 0 ID=cds-WP_004180482.1;Parent=gene-NLI98_RS08365;Dbxref=Genbank:WP_004180482.1;Name=WP_004180482.1;Ontology_term=GO:0009236,GO:0008818;gbkey=CDS;gene=cobS;go_function=cobalamin 5'-phosphate synthase activity|0008818||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227824.1;locus_tag=NLI98_RS08365;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_004180482.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1741845 1742912 . + . ID=gene-NLI98_RS08370;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=NLI98_RS08370;old_locus_tag=NLI98_08365 NZ_CP100601.1 Protein Homology CDS 1741845 1742912 . + 0 ID=cds-WP_088498066.1;Parent=gene-NLI98_RS08370;Dbxref=Genbank:WP_088498066.1;Name=WP_088498066.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227823.1;locus_tag=NLI98_RS08370;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_088498066.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1742955 1744064 . - . ID=gene-NLI98_RS08375;Name=NLI98_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08375;old_locus_tag=NLI98_08370 NZ_CP100601.1 Protein Homology CDS 1742955 1744064 . - 0 ID=cds-WP_004184774.1;Parent=gene-NLI98_RS08375;Dbxref=Genbank:WP_004184774.1;Name=WP_004184774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227822.1;locus_tag=NLI98_RS08375;product=adenosylhomocysteinase;protein_id=WP_004184774.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1744263 1744994 . + . ID=gene-NLI98_RS08380;Name=NLI98_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08380;old_locus_tag=NLI98_08375 NZ_CP100601.1 Protein Homology CDS 1744263 1744994 . + 0 ID=cds-WP_002911879.1;Parent=gene-NLI98_RS08380;Dbxref=Genbank:WP_002911879.1;Name=WP_002911879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227821.1;locus_tag=NLI98_RS08380;product=HPP family protein;protein_id=WP_002911879.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1745016 1745405 . - . ID=gene-NLI98_RS08385;Name=NLI98_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08385;old_locus_tag=NLI98_08380 NZ_CP100601.1 Protein Homology CDS 1745016 1745405 . - 0 ID=cds-WP_004175282.1;Parent=gene-NLI98_RS08385;Dbxref=Genbank:WP_004175282.1;Name=WP_004175282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227820.1;locus_tag=NLI98_RS08385;product=tautomerase family protein;protein_id=WP_004175282.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1745521 1746477 . + . ID=gene-NLI98_RS08390;Name=NLI98_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08390;old_locus_tag=NLI98_08385 NZ_CP100601.1 Protein Homology CDS 1745521 1746477 . + 0 ID=cds-WP_088498067.1;Parent=gene-NLI98_RS08390;Dbxref=Genbank:WP_088498067.1;Name=WP_088498067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227819.1;locus_tag=NLI98_RS08390;product=LysR family transcriptional regulator;protein_id=WP_088498067.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1746437 1747176 . - . ID=gene-NLI98_RS08395;Name=NLI98_RS08395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS08395;old_locus_tag=NLI98_08390;pseudo=true NZ_CP100601.1 Protein Homology CDS 1746437 1747176 . - 0 ID=cds-NLI98_RS08395;Parent=gene-NLI98_RS08395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227818.1;locus_tag=NLI98_RS08395;product=lipoate--protein ligase family protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 1747223 1748542 . - . ID=gene-NLI98_RS08400;Name=shiA;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;locus_tag=NLI98_RS08400;old_locus_tag=NLI98_08395 NZ_CP100601.1 Protein Homology CDS 1747223 1748542 . - 0 ID=cds-WP_004158843.1;Parent=gene-NLI98_RS08400;Dbxref=Genbank:WP_004158843.1;Name=WP_004158843.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=shiA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227817.1;locus_tag=NLI98_RS08400;product=shikimate transporter;protein_id=WP_004158843.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1748886 1749347 . + . ID=gene-NLI98_RS08405;Name=NLI98_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08405;old_locus_tag=NLI98_08400 NZ_CP100601.1 Protein Homology CDS 1748886 1749347 . + 0 ID=cds-WP_014907250.1;Parent=gene-NLI98_RS08405;Dbxref=Genbank:WP_014907250.1;Name=WP_014907250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227816.1;locus_tag=NLI98_RS08405;product=molybdopterin-dependent oxidoreductase;protein_id=WP_014907250.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1749358 1751268 . + . ID=gene-NLI98_RS08410;Name=NLI98_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08410;old_locus_tag=NLI98_08405 NZ_CP100601.1 Protein Homology CDS 1749358 1751268 . + 0 ID=cds-WP_004196289.1;Parent=gene-NLI98_RS08410;Dbxref=Genbank:WP_004196289.1;Name=WP_004196289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227815.1;locus_tag=NLI98_RS08410;product=EAL domain-containing protein;protein_id=WP_004196289.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1751265 1751392 . - . ID=gene-NLI98_RS08415;Name=NLI98_RS08415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS08415;old_locus_tag=NLI98_08410;pseudo=true NZ_CP100601.1 Protein Homology CDS 1751265 1751392 . - 0 ID=cds-NLI98_RS08415;Parent=gene-NLI98_RS08415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227814.1;locus_tag=NLI98_RS08415;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 1751490 1751822 . + . ID=gene-NLI98_RS08420;Name=NLI98_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08420;old_locus_tag=NLI98_08415 NZ_CP100601.1 Protein Homology CDS 1751490 1751822 . + 0 ID=cds-WP_002911866.1;Parent=gene-NLI98_RS08420;Dbxref=Genbank:WP_002911866.1;Name=WP_002911866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227813.1;locus_tag=NLI98_RS08420;product=DUF1971 domain-containing protein;protein_id=WP_002911866.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1751829 1752164 . + . ID=gene-NLI98_RS08425;Name=NLI98_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08425;old_locus_tag=NLI98_08420 NZ_CP100601.1 Protein Homology CDS 1751829 1752164 . + 0 ID=cds-WP_088498068.1;Parent=gene-NLI98_RS08425;Dbxref=Genbank:WP_088498068.1;Name=WP_088498068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227812.1;locus_tag=NLI98_RS08425;product=DUF1869 domain-containing protein;protein_id=WP_088498068.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1752170 1753084 . - . ID=gene-NLI98_RS08430;Name=NLI98_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08430;old_locus_tag=NLI98_08425 NZ_CP100601.1 Protein Homology CDS 1752170 1753084 . - 0 ID=cds-WP_088498069.1;Parent=gene-NLI98_RS08430;Dbxref=Genbank:WP_088498069.1;Name=WP_088498069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227811.1;locus_tag=NLI98_RS08430;product=LysR substrate-binding domain-containing protein;protein_id=WP_088498069.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1753216 1753791 . + . ID=gene-NLI98_RS08435;Name=NLI98_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08435;old_locus_tag=NLI98_08430 NZ_CP100601.1 Protein Homology CDS 1753216 1753791 . + 0 ID=cds-WP_088498070.1;Parent=gene-NLI98_RS08435;Dbxref=Genbank:WP_088498070.1;Name=WP_088498070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227810.1;locus_tag=NLI98_RS08435;product=hypothetical protein;protein_id=WP_088498070.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1753984 1754820 . + . ID=gene-NLI98_RS08440;Name=NLI98_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08440;old_locus_tag=NLI98_08435 NZ_CP100601.1 Protein Homology CDS 1753984 1754820 . + 0 ID=cds-WP_004180471.1;Parent=gene-NLI98_RS08440;Dbxref=Genbank:WP_004180471.1;Name=WP_004180471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227809.1;locus_tag=NLI98_RS08440;product=alpha/beta hydrolase;protein_id=WP_004180471.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1755027 1755998 . + . ID=gene-NLI98_RS08445;Name=NLI98_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08445;old_locus_tag=NLI98_08440 NZ_CP100601.1 Protein Homology CDS 1755027 1755998 . + 0 ID=cds-WP_002911798.1;Parent=gene-NLI98_RS08445;Dbxref=Genbank:WP_002911798.1;Name=WP_002911798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227808.1;locus_tag=NLI98_RS08445;product=sensor domain-containing diguanylate cyclase;protein_id=WP_002911798.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1755995 1757098 . - . ID=gene-NLI98_RS08450;Name=NLI98_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08450;old_locus_tag=NLI98_08445 NZ_CP100601.1 Protein Homology CDS 1755995 1757098 . - 0 ID=cds-WP_102024179.1;Parent=gene-NLI98_RS08450;Dbxref=Genbank:WP_102024179.1;Name=WP_102024179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227807.1;locus_tag=NLI98_RS08450;product=AarF/UbiB family protein;protein_id=WP_102024179.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1757252 1757326 . + . ID=gene-NLI98_RS08455;Name=NLI98_RS08455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS08455;old_locus_tag=NLI98_08450;partial=true;pseudo=true;start_range=.,1757252 NZ_CP100601.1 Protein Homology CDS 1757252 1757326 . + 0 ID=cds-NLI98_RS08455;Parent=gene-NLI98_RS08455;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016161430.1;locus_tag=NLI98_RS08455;partial=true;product=type II toxin-antitoxin system PemK/MazF family toxin;pseudo=true;start_range=.,1757252;transl_table=11 NZ_CP100601.1 RefSeq gene 1757742 1758929 . + . ID=gene-NLI98_RS08460;Name=NLI98_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08460;old_locus_tag=NLI98_08455 NZ_CP100601.1 Protein Homology CDS 1757742 1758929 . + 0 ID=cds-WP_032458934.1;Parent=gene-NLI98_RS08460;Dbxref=Genbank:WP_032458934.1;Name=WP_032458934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004916389.1;locus_tag=NLI98_RS08460;product=nucleoid-associated protein;protein_id=WP_032458934.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1758947 1760110 . + . ID=gene-NLI98_RS08465;Name=NLI98_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08465;old_locus_tag=NLI98_08460 NZ_CP100601.1 Protein Homology CDS 1758947 1760110 . + 0 ID=cds-WP_063848828.1;Parent=gene-NLI98_RS08465;Dbxref=Genbank:WP_063848828.1;Name=WP_063848828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004916386.1;locus_tag=NLI98_RS08465;product=hypothetical protein;protein_id=WP_063848828.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1760550 1761299 . - . ID=gene-NLI98_RS08470;Name=NLI98_RS08470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS08470;old_locus_tag=NLI98_08465;pseudo=true NZ_CP100601.1 Protein Homology CDS 1760550 1761299 . - 0 ID=cds-NLI98_RS08470;Parent=gene-NLI98_RS08470;Note=internal stop;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611491.1;locus_tag=NLI98_RS08470;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 1761606 1762691 . + . ID=gene-NLI98_RS08475;Name=NLI98_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08475;old_locus_tag=NLI98_08470 NZ_CP100601.1 Protein Homology CDS 1761606 1762691 . + 0 ID=cds-WP_032458931.1;Parent=gene-NLI98_RS08475;Dbxref=Genbank:WP_032458931.1;Name=WP_032458931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019846358.1;locus_tag=NLI98_RS08475;product=DNA cytosine methyltransferase;protein_id=WP_032458931.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1762697 1765474 . + . ID=gene-NLI98_RS08480;Name=NLI98_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08480;old_locus_tag=NLI98_08475 NZ_CP100601.1 Protein Homology CDS 1762697 1765474 . + 0 ID=cds-WP_102024181.1;Parent=gene-NLI98_RS08480;Dbxref=Genbank:WP_102024181.1;Name=WP_102024181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915439.1;locus_tag=NLI98_RS08480;product=hypothetical protein;protein_id=WP_102024181.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1765509 1768322 . + . ID=gene-NLI98_RS08485;Name=NLI98_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08485;old_locus_tag=NLI98_08480 NZ_CP100601.1 Protein Homology CDS 1765509 1768322 . + 0 ID=cds-WP_032458930.1;Parent=gene-NLI98_RS08485;Dbxref=Genbank:WP_032458930.1;Name=WP_032458930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001085178.1;locus_tag=NLI98_RS08485;product=kinetochore protein;protein_id=WP_032458930.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1768340 1774336 . + . ID=gene-NLI98_RS08490;Name=NLI98_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08490;old_locus_tag=NLI98_08485 NZ_CP100601.1 Protein Homology CDS 1768340 1774336 . + 0 ID=cds-WP_063848797.1;Parent=gene-NLI98_RS08490;Dbxref=Genbank:WP_063848797.1;Name=WP_063848797.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001064274.1;locus_tag=NLI98_RS08490;product=DEAD/DEAH box helicase;protein_id=WP_063848797.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1774342 1775496 . + . ID=gene-NLI98_RS08495;Name=NLI98_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08495;old_locus_tag=NLI98_08490 NZ_CP100601.1 Protein Homology CDS 1774342 1775496 . + 0 ID=cds-WP_159195390.1;Parent=gene-NLI98_RS08495;Dbxref=Genbank:WP_159195390.1;Name=WP_159195390.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024117.2;locus_tag=NLI98_RS08495;product=PD-(D/E)XK nuclease family protein;protein_id=WP_159195390.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1776367 1777311 . + . ID=gene-NLI98_RS08500;Name=NLI98_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08500;old_locus_tag=NLI98_08495 NZ_CP100601.1 Protein Homology CDS 1776367 1777311 . + 0 ID=cds-WP_032458927.1;Parent=gene-NLI98_RS08500;Dbxref=Genbank:WP_032458927.1;Name=WP_032458927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227789.1;locus_tag=NLI98_RS08500;product=zincin-like metallopeptidase domain-containing protein;protein_id=WP_032458927.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1777505 1778251 . - . ID=gene-NLI98_RS08505;Name=NLI98_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08505;old_locus_tag=NLI98_08500 NZ_CP100601.1 Protein Homology CDS 1777505 1778251 . - 0 ID=cds-WP_032458926.1;Parent=gene-NLI98_RS08505;Dbxref=Genbank:WP_032458926.1;Name=WP_032458926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227788.1;locus_tag=NLI98_RS08505;product=hypothetical protein;protein_id=WP_032458926.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1778261 1780120 . - . ID=gene-NLI98_RS08510;Name=NLI98_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08510;old_locus_tag=NLI98_08505 NZ_CP100601.1 Protein Homology CDS 1778261 1780120 . - 0 ID=cds-WP_032458925.1;Parent=gene-NLI98_RS08510;Dbxref=Genbank:WP_032458925.1;Name=WP_032458925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227787.1;locus_tag=NLI98_RS08510;product=type IV secretion system DNA-binding domain-containing protein;protein_id=WP_032458925.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1780830 1781135 . - . ID=gene-NLI98_RS08515;Name=NLI98_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08515;old_locus_tag=NLI98_08510 NZ_CP100601.1 Protein Homology CDS 1780830 1781135 . - 0 ID=cds-WP_032458924.1;Parent=gene-NLI98_RS08515;Dbxref=Genbank:WP_032458924.1;Name=WP_032458924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011172016.1;locus_tag=NLI98_RS08515;product=hypothetical protein;protein_id=WP_032458924.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1781180 1781482 . - . ID=gene-NLI98_RS08520;Name=NLI98_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08520;old_locus_tag=NLI98_08515 NZ_CP100601.1 Protein Homology CDS 1781180 1781482 . - 0 ID=cds-WP_001044654.1;Parent=gene-NLI98_RS08520;Dbxref=Genbank:WP_001044654.1;Name=WP_001044654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000754361.1;locus_tag=NLI98_RS08520;product=TrbM/KikA/MpfK family conjugal transfer protein;protein_id=WP_001044654.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1781518 1781916 . - . ID=gene-NLI98_RS08525;Name=NLI98_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08525;old_locus_tag=NLI98_08520 NZ_CP100601.1 Protein Homology CDS 1781518 1781916 . - 0 ID=cds-WP_071826656.1;Parent=gene-NLI98_RS08525;Dbxref=Genbank:WP_071826656.1;Name=WP_071826656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592251.1;locus_tag=NLI98_RS08525;product=cag pathogenicity island Cag12 family protein;protein_id=WP_071826656.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1781913 1782938 . - . ID=gene-NLI98_RS08530;Name=virB11;gbkey=Gene;gene=virB11;gene_biotype=protein_coding;locus_tag=NLI98_RS08530;old_locus_tag=NLI98_08525 NZ_CP100601.1 Protein Homology CDS 1781913 1782938 . - 0 ID=cds-WP_032458923.1;Parent=gene-NLI98_RS08530;Dbxref=Genbank:WP_032458923.1;Name=WP_032458923.1;Ontology_term=GO:0044097,GO:0043684;gbkey=CDS;gene=virB11;go_component=type IV secretion system complex|0043684||IEA;go_process=secretion by the type IV secretion system|0044097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227785.1;locus_tag=NLI98_RS08530;product=P-type DNA transfer ATPase VirB11;protein_id=WP_032458923.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1782928 1784196 . - . ID=gene-NLI98_RS08535;Name=NLI98_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08535;old_locus_tag=NLI98_08530 NZ_CP100601.1 Protein Homology CDS 1782928 1784196 . - 0 ID=cds-WP_032458922.1;Parent=gene-NLI98_RS08535;Dbxref=Genbank:WP_032458922.1;Name=WP_032458922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227784.1;locus_tag=NLI98_RS08535;product=type VI secretion protein;protein_id=WP_032458922.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1784240 1785148 . - . ID=gene-NLI98_RS08540;Name=virB9;gbkey=Gene;gene=virB9;gene_biotype=protein_coding;locus_tag=NLI98_RS08540;old_locus_tag=NLI98_08535 NZ_CP100601.1 Protein Homology CDS 1784240 1785148 . - 0 ID=cds-WP_000976329.1;Parent=gene-NLI98_RS08540;Dbxref=Genbank:WP_000976329.1;Name=WP_000976329.1;gbkey=CDS;gene=virB9;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227783.1;locus_tag=NLI98_RS08540;product=P-type conjugative transfer protein VirB9;protein_id=WP_000976329.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1785145 1785828 . - . ID=gene-NLI98_RS08545;Name=NLI98_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08545;old_locus_tag=NLI98_08540 NZ_CP100601.1 Protein Homology CDS 1785145 1785828 . - 0 ID=cds-WP_001005327.1;Parent=gene-NLI98_RS08545;Dbxref=Genbank:WP_001005327.1;Name=WP_001005327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227782.1;locus_tag=NLI98_RS08545;product=type IV secretion system protein;protein_id=WP_001005327.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1786046 1787119 . - . ID=gene-NLI98_RS08550;Name=NLI98_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08550;old_locus_tag=NLI98_08545 NZ_CP100601.1 Protein Homology CDS 1786046 1787119 . - 0 ID=cds-WP_000014008.1;Parent=gene-NLI98_RS08550;Dbxref=Genbank:WP_000014008.1;Name=WP_000014008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227780.1;locus_tag=NLI98_RS08550;product=type IV secretion system protein;protein_id=WP_000014008.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1787123 1787365 . - . ID=gene-NLI98_RS08555;Name=NLI98_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08555;old_locus_tag=NLI98_08550 NZ_CP100601.1 Protein Homology CDS 1787123 1787365 . - 0 ID=cds-WP_000949385.1;Parent=gene-NLI98_RS08555;Dbxref=Genbank:WP_000949385.1;Name=WP_000949385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000949384.1;locus_tag=NLI98_RS08555;product=EexN family lipoprotein;protein_id=WP_000949385.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1787373 1788086 . - . ID=gene-NLI98_RS08560;Name=NLI98_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08560;old_locus_tag=NLI98_08555 NZ_CP100601.1 Protein Homology CDS 1787373 1788086 . - 0 ID=cds-WP_000848059.1;Parent=gene-NLI98_RS08560;Dbxref=Genbank:WP_000848059.1;Name=WP_000848059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227779.1;locus_tag=NLI98_RS08560;product=type IV secretion system protein;protein_id=WP_000848059.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1788105 1790843 . - . ID=gene-NLI98_RS08565;Name=NLI98_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08565;old_locus_tag=NLI98_08560 NZ_CP100601.1 Protein Homology CDS 1788105 1790843 . - 0 ID=cds-WP_159195391.1;Parent=gene-NLI98_RS08565;Dbxref=Genbank:WP_159195391.1;Name=WP_159195391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227778.1;locus_tag=NLI98_RS08565;product=VirB3 family type IV secretion system protein;protein_id=WP_159195391.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1790856 1791149 . - . ID=gene-NLI98_RS08570;Name=NLI98_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08570;old_locus_tag=NLI98_08565 NZ_CP100601.1 Protein Homology CDS 1790856 1791149 . - 0 ID=cds-WP_000600171.1;Parent=gene-NLI98_RS08570;Dbxref=Genbank:WP_000600171.1;Name=WP_000600171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012885319.1;locus_tag=NLI98_RS08570;product=TrbC/VirB2 family protein;protein_id=WP_000600171.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1791149 1791859 . - . ID=gene-NLI98_RS08575;Name=NLI98_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08575;old_locus_tag=NLI98_08570 NZ_CP100601.1 Protein Homology CDS 1791149 1791859 . - 0 ID=cds-WP_063848795.1;Parent=gene-NLI98_RS08575;Dbxref=Genbank:WP_063848795.1;Name=WP_063848795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227776.1;locus_tag=NLI98_RS08575;product=lytic transglycosylase domain-containing protein;protein_id=WP_063848795.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1791932 1792165 . - . ID=gene-NLI98_RS08580;Name=NLI98_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08580;old_locus_tag=NLI98_08575 NZ_CP100601.1 Protein Homology CDS 1791932 1792165 . - 0 ID=cds-WP_001231171.1;Parent=gene-NLI98_RS08580;Dbxref=Genbank:WP_001231171.1;Name=WP_001231171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227775.1;locus_tag=NLI98_RS08580;product=hypothetical protein;protein_id=WP_001231171.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1792734 1792883 . - . ID=gene-NLI98_RS08585;Name=NLI98_RS08585;end_range=1792883,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS08585;old_locus_tag=NLI98_08580;partial=true;pseudo=true NZ_CP100601.1 Protein Homology CDS 1792734 1792883 . - 0 ID=cds-NLI98_RS08585;Parent=gene-NLI98_RS08585;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1792883,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245074.1;locus_tag=NLI98_RS08585;partial=true;product=Hha/YmoA family nucleoid-associated regulatory protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 1793105 1793314 . - . ID=gene-NLI98_RS08590;Name=NLI98_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08590;old_locus_tag=NLI98_08585 NZ_CP100601.1 Protein Homology CDS 1793105 1793314 . - 0 ID=cds-WP_001112403.1;Parent=gene-NLI98_RS08590;Dbxref=Genbank:WP_001112403.1;Name=WP_001112403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001112402.1;locus_tag=NLI98_RS08590;product=TraR/DksA family transcriptional regulator;protein_id=WP_001112403.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1793304 1793885 . - . ID=gene-NLI98_RS08595;Name=NLI98_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08595;old_locus_tag=NLI98_08590 NZ_CP100601.1 Protein Homology CDS 1793304 1793885 . - 0 ID=cds-WP_032458918.1;Parent=gene-NLI98_RS08595;Dbxref=Genbank:WP_032458918.1;Name=WP_032458918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227773.1;locus_tag=NLI98_RS08595;product=DUF2857 domain-containing protein;protein_id=WP_032458918.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1793870 1794051 . - . ID=gene-NLI98_RS08600;Name=NLI98_RS08600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS08600;old_locus_tag=NLI98_08595;pseudo=true NZ_CP100601.1 Protein Homology CDS 1793870 1794051 . - 0 ID=cds-NLI98_RS08600;Parent=gene-NLI98_RS08600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001309570.1;locus_tag=NLI98_RS08600;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 1794073 1794258 . - . ID=gene-NLI98_RS08605;Name=NLI98_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08605;old_locus_tag=NLI98_08600 NZ_CP100601.1 Protein Homology CDS 1794073 1794258 . - 0 ID=cds-WP_000205185.1;Parent=gene-NLI98_RS08605;Dbxref=Genbank:WP_000205185.1;Name=WP_000205185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000200568.1;locus_tag=NLI98_RS08605;product=AlpA family transcriptional regulator;protein_id=WP_000205185.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1794398 1795324 . - . ID=gene-NLI98_RS08610;Name=NLI98_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08610;old_locus_tag=NLI98_08605 NZ_CP100601.1 Protein Homology CDS 1794398 1795324 . - 0 ID=cds-WP_172676870.1;Parent=gene-NLI98_RS08610;Dbxref=Genbank:WP_172676870.1;Name=WP_172676870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227772.1;locus_tag=NLI98_RS08610;product=hypothetical protein;protein_id=WP_172676870.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1796195 1798216 . - . ID=gene-NLI98_RS08615;Name=fyuA;gbkey=Gene;gene=fyuA;gene_biotype=protein_coding;locus_tag=NLI98_RS08615;old_locus_tag=NLI98_08610 NZ_CP100601.1 Protein Homology CDS 1796195 1798216 . - 0 ID=cds-WP_088498030.1;Parent=gene-NLI98_RS08615;Dbxref=Genbank:WP_088498030.1;Name=WP_088498030.1;gbkey=CDS;gene=fyuA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227771.1;locus_tag=NLI98_RS08615;product=siderophore yersiniabactin receptor FyuA;protein_id=WP_088498030.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1798347 1799924 . - . ID=gene-NLI98_RS08620;Name=ybtE;gbkey=Gene;gene=ybtE;gene_biotype=protein_coding;locus_tag=NLI98_RS08620;old_locus_tag=NLI98_08615 NZ_CP100601.1 Protein Homology CDS 1798347 1799924 . - 0 ID=cds-WP_001088826.1;Parent=gene-NLI98_RS08620;Dbxref=Genbank:WP_001088826.1;Name=WP_001088826.1;gbkey=CDS;gene=ybtE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227770.1;locus_tag=NLI98_RS08620;product=yersiniabactin biosynthesis salycil-AMP ligase YbtE;protein_id=WP_001088826.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1799928 1800731 . - . ID=gene-NLI98_RS08625;Name=ybtT;gbkey=Gene;gene=ybtT;gene_biotype=protein_coding;locus_tag=NLI98_RS08625;old_locus_tag=NLI98_08620 NZ_CP100601.1 Protein Homology CDS 1799928 1800731 . - 0 ID=cds-WP_000194284.1;Parent=gene-NLI98_RS08625;Dbxref=Genbank:WP_000194284.1;Name=WP_000194284.1;gbkey=CDS;gene=ybtT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212799.1;locus_tag=NLI98_RS08625;product=yersiniabactin biosynthesis thioesterase YbtT;protein_id=WP_000194284.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1800728 1801828 . - . ID=gene-NLI98_RS08630;Name=ybtU;gbkey=Gene;gene=ybtU;gene_biotype=protein_coding;locus_tag=NLI98_RS08630;old_locus_tag=NLI98_08625 NZ_CP100601.1 Protein Homology CDS 1800728 1801828 . - 0 ID=cds-WP_000982866.1;Parent=gene-NLI98_RS08630;Dbxref=Genbank:WP_000982866.1;Name=WP_000982866.1;gbkey=CDS;gene=ybtU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227768.1;locus_tag=NLI98_RS08630;product=yersiniabactin biosynthesis oxidoreductase YbtU;protein_id=WP_000982866.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1801825 1811316 . - . ID=gene-NLI98_RS08635;Name=irp1;gbkey=Gene;gene=irp1;gene_biotype=protein_coding;locus_tag=NLI98_RS08635;old_locus_tag=NLI98_08630 NZ_CP100601.1 Protein Homology CDS 1801825 1811316 . - 0 ID=cds-WP_088498031.1;Parent=gene-NLI98_RS08635;Dbxref=Genbank:WP_088498031.1;Name=WP_088498031.1;gbkey=CDS;gene=irp1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227767.1;locus_tag=NLI98_RS08635;product=yersiniabactin polyketide synthase HMWP1;protein_id=WP_088498031.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1811404 1817511 . - . ID=gene-NLI98_RS08640;Name=irp2;gbkey=Gene;gene=irp2;gene_biotype=protein_coding;locus_tag=NLI98_RS08640;old_locus_tag=NLI98_08635 NZ_CP100601.1 Protein Homology CDS 1811404 1817511 . - 0 ID=cds-WP_032458914.1;Parent=gene-NLI98_RS08640;Dbxref=Genbank:WP_032458914.1;Name=WP_032458914.1;gbkey=CDS;gene=irp2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227766.1;locus_tag=NLI98_RS08640;product=yersiniabactin non-ribosomal peptide synthetase HMWP2;protein_id=WP_032458914.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1817702 1818661 . - . ID=gene-NLI98_RS08645;Name=ybtA;gbkey=Gene;gene=ybtA;gene_biotype=protein_coding;locus_tag=NLI98_RS08645;old_locus_tag=NLI98_08640 NZ_CP100601.1 Protein Homology CDS 1817702 1818661 . - 0 ID=cds-WP_032424458.1;Parent=gene-NLI98_RS08645;Dbxref=Genbank:WP_032424458.1;Name=WP_032424458.1;gbkey=CDS;gene=ybtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227765.1;locus_tag=NLI98_RS08645;product=yersiniabactin transcriptional regulator YbtA;protein_id=WP_032424458.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1818918 1820630 . + . ID=gene-NLI98_RS08650;Name=ybtP;gbkey=Gene;gene=ybtP;gene_biotype=protein_coding;locus_tag=NLI98_RS08650;old_locus_tag=NLI98_08645 NZ_CP100601.1 Protein Homology CDS 1818918 1820630 . + 0 ID=cds-WP_001327262.1;Parent=gene-NLI98_RS08650;Dbxref=Genbank:WP_001327262.1;Name=WP_001327262.1;gbkey=CDS;gene=ybtP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227764.1;locus_tag=NLI98_RS08650;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtP;protein_id=WP_001327262.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1820617 1822419 . + . ID=gene-NLI98_RS08655;Name=ybtQ;gbkey=Gene;gene=ybtQ;gene_biotype=protein_coding;locus_tag=NLI98_RS08655;old_locus_tag=NLI98_08650 NZ_CP100601.1 Protein Homology CDS 1820617 1822419 . + 0 ID=cds-WP_032458912.1;Parent=gene-NLI98_RS08655;Dbxref=Genbank:WP_032458912.1;Name=WP_032458912.1;gbkey=CDS;gene=ybtQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227763.1;locus_tag=NLI98_RS08655;product=yersiniabactin ABC transporter ATP-binding/permease protein YbtQ;protein_id=WP_032458912.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1822412 1823692 . + . ID=gene-NLI98_RS08660;Name=ybtX;gbkey=Gene;gene=ybtX;gene_biotype=protein_coding;locus_tag=NLI98_RS08660;old_locus_tag=NLI98_08655 NZ_CP100601.1 Protein Homology CDS 1822412 1823692 . + 0 ID=cds-WP_032458910.1;Parent=gene-NLI98_RS08660;Dbxref=Genbank:WP_032458910.1;Name=WP_032458910.1;gbkey=CDS;gene=ybtX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227762.1;locus_tag=NLI98_RS08660;product=yersiniabactin-associated zinc MFS transporter YbtX;protein_id=WP_032458910.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1823720 1825024 . + . ID=gene-NLI98_RS08665;Name=ybtS;gbkey=Gene;gene=ybtS;gene_biotype=protein_coding;locus_tag=NLI98_RS08665;old_locus_tag=NLI98_08660 NZ_CP100601.1 Protein Homology CDS 1823720 1825024 . + 0 ID=cds-WP_032458908.1;Parent=gene-NLI98_RS08665;Dbxref=Genbank:WP_032458908.1;Name=WP_032458908.1;gbkey=CDS;gene=ybtS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227761.1;locus_tag=NLI98_RS08665;product=yersiniabactin biosynthesis salicylate synthase Irp9/YbtS;protein_id=WP_032458908.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1825218 1826480 . - . ID=gene-NLI98_RS08670;Name=NLI98_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08670;old_locus_tag=NLI98_08665 NZ_CP100601.1 Protein Homology CDS 1825218 1826480 . - 0 ID=cds-WP_000059622.1;Parent=gene-NLI98_RS08670;Dbxref=Genbank:WP_000059622.1;Name=WP_000059622.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227760.1;locus_tag=NLI98_RS08670;product=tyrosine-type recombinase/integrase;protein_id=WP_000059622.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1826642 1826717 . - . ID=gene-NLI98_RS08675;Name=NLI98_RS08675;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS08675;old_locus_tag=NLI98_08670 NZ_CP100601.1 tRNAscan-SE tRNA 1826642 1826717 . - . ID=rna-NLI98_RS08675;Parent=gene-NLI98_RS08675;anticodon=(pos:complement(1826682..1826684));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS08675;product=tRNA-Asn NZ_CP100601.1 tRNAscan-SE exon 1826642 1826717 . - . ID=exon-NLI98_RS08675-1;Parent=rna-NLI98_RS08675;anticodon=(pos:complement(1826682..1826684));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS08675;product=tRNA-Asn NZ_CP100601.1 RefSeq gene 1826910 1828346 . + . ID=gene-NLI98_RS08680;Name=NLI98_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08680;old_locus_tag=NLI98_08675 NZ_CP100601.1 Protein Homology CDS 1826910 1828346 . + 0 ID=cds-WP_004151469.1;Parent=gene-NLI98_RS08680;Dbxref=Genbank:WP_004151469.1;Name=WP_004151469.1;Ontology_term=GO:0055085,GO:0015297;gbkey=CDS;go_function=antiporter activity|0015297||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227805.1;locus_tag=NLI98_RS08680;product=EmmdR/YeeO family multidrug/toxin efflux MATE transporter;protein_id=WP_004151469.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1828475 1828550 . + . ID=gene-NLI98_RS08685;Name=NLI98_RS08685;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS08685;old_locus_tag=NLI98_08680 NZ_CP100601.1 tRNAscan-SE tRNA 1828475 1828550 . + . ID=rna-NLI98_RS08685;Parent=gene-NLI98_RS08685;anticodon=(pos:1828508..1828510);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS08685;product=tRNA-Asn NZ_CP100601.1 tRNAscan-SE exon 1828475 1828550 . + . ID=exon-NLI98_RS08685-1;Parent=rna-NLI98_RS08685;anticodon=(pos:1828508..1828510);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS08685;product=tRNA-Asn NZ_CP100601.1 RefSeq gene 1828712 1830166 . - . ID=gene-NLI98_RS08690;Name=NLI98_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08690;old_locus_tag=NLI98_08685 NZ_CP100601.1 Protein Homology CDS 1828712 1830166 . - 0 ID=cds-WP_088498032.1;Parent=gene-NLI98_RS08690;Dbxref=Genbank:WP_088498032.1;Name=WP_088498032.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227804.1;locus_tag=NLI98_RS08690;product=AMP nucleosidase;protein_id=WP_088498032.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1830296 1830541 . - . ID=gene-NLI98_RS08695;Name=pmrD;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=NLI98_RS08695;old_locus_tag=NLI98_08690 NZ_CP100601.1 Protein Homology CDS 1830296 1830541 . - 0 ID=cds-WP_023284006.1;Parent=gene-NLI98_RS08695;Dbxref=Genbank:WP_023284006.1;Name=WP_023284006.1;gbkey=CDS;gene=pmrD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227803.1;locus_tag=NLI98_RS08695;product=signal transduction protein PmrD;protein_id=WP_023284006.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1830814 1832436 . + . ID=gene-NLI98_RS08700;Name=NLI98_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08700;old_locus_tag=NLI98_08695 NZ_CP100601.1 Protein Homology CDS 1830814 1832436 . + 0 ID=cds-WP_049000873.1;Parent=gene-NLI98_RS08700;Dbxref=Genbank:WP_049000873.1;Name=WP_049000873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227802.1;locus_tag=NLI98_RS08700;product=alpha/beta hydrolase;protein_id=WP_049000873.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1832347 1833279 . - . ID=gene-NLI98_RS08705;Name=NLI98_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08705;old_locus_tag=NLI98_08700 NZ_CP100601.1 Protein Homology CDS 1832347 1833279 . - 0 ID=cds-WP_004184763.1;Parent=gene-NLI98_RS08705;Dbxref=Genbank:WP_004184763.1;Name=WP_004184763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004141186.1;locus_tag=NLI98_RS08705;product=hypothetical protein;protein_id=WP_004184763.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1833400 1834362 . - . ID=gene-NLI98_RS08710;Name=NLI98_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08710;old_locus_tag=NLI98_08705 NZ_CP100601.1 Protein Homology CDS 1833400 1834362 . - 0 ID=cds-WP_223177664.1;Parent=gene-NLI98_RS08710;Dbxref=Genbank:WP_223177664.1;Name=WP_223177664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804319.1;locus_tag=NLI98_RS08710;product=oxidoreductase;protein_id=WP_223177664.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1834253 1835078 . - . ID=gene-NLI98_RS08715;Name=NLI98_RS08715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS08715;old_locus_tag=NLI98_08710;pseudo=true NZ_CP100601.1 Protein Homology CDS 1834253 1835078 . - 0 ID=cds-NLI98_RS08715;Parent=gene-NLI98_RS08715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227799.1;locus_tag=NLI98_RS08715;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 1835668 1837302 . + . ID=gene-NLI98_RS08720;Name=NLI98_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08720;old_locus_tag=NLI98_08715 NZ_CP100601.1 Protein Homology CDS 1835668 1837302 . + 0 ID=cds-WP_088498033.1;Parent=gene-NLI98_RS08720;Dbxref=Genbank:WP_088498033.1;Name=WP_088498033.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;gbkey=CDS;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227798.1;locus_tag=NLI98_RS08720;product=Na+/H+ antiporter;protein_id=WP_088498033.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1837396 1837471 . - . ID=gene-NLI98_RS08725;Name=NLI98_RS08725;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS08725;old_locus_tag=NLI98_08720 NZ_CP100601.1 tRNAscan-SE tRNA 1837396 1837471 . - . ID=rna-NLI98_RS08725;Parent=gene-NLI98_RS08725;anticodon=(pos:complement(1837436..1837438));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS08725;product=tRNA-Asn NZ_CP100601.1 tRNAscan-SE exon 1837396 1837471 . - . ID=exon-NLI98_RS08725-1;Parent=rna-NLI98_RS08725;anticodon=(pos:complement(1837436..1837438));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS08725;product=tRNA-Asn NZ_CP100601.1 RefSeq gene 1837802 1838719 . + . ID=gene-NLI98_RS08730;Name=nac;gbkey=Gene;gene=nac;gene_biotype=protein_coding;locus_tag=NLI98_RS08730;old_locus_tag=NLI98_08725 NZ_CP100601.1 Protein Homology CDS 1837802 1838719 . + 0 ID=cds-WP_002911729.1;Parent=gene-NLI98_RS08730;Dbxref=Genbank:WP_002911729.1;Name=WP_002911729.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nac;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227759.1;locus_tag=NLI98_RS08730;product=nitrogen assimilation transcriptional regulator NAC;protein_id=WP_002911729.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1838826 1839776 . + . ID=gene-NLI98_RS08735;Name=cbl;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;locus_tag=NLI98_RS08735;old_locus_tag=NLI98_08730 NZ_CP100601.1 Protein Homology CDS 1838826 1839776 . + 0 ID=cds-WP_004180456.1;Parent=gene-NLI98_RS08735;Dbxref=Genbank:WP_004180456.1;Name=WP_004180456.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cbl;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227758.1;locus_tag=NLI98_RS08735;product=HTH-type transcriptional regulator Cbl;protein_id=WP_004180456.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1839855 1840796 . + . ID=gene-NLI98_RS08740;Name=ldtA;gbkey=Gene;gene=ldtA;gene_biotype=protein_coding;locus_tag=NLI98_RS08740;old_locus_tag=NLI98_08735 NZ_CP100601.1 Protein Homology CDS 1839855 1840796 . + 0 ID=cds-WP_022615586.1;Parent=gene-NLI98_RS08740;Dbxref=Genbank:WP_022615586.1;Name=WP_022615586.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227757.1;locus_tag=NLI98_RS08740;product=L%2CD-transpeptidase;protein_id=WP_022615586.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1841175 1841927 . - . ID=gene-NLI98_RS08745;Name=NLI98_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08745;old_locus_tag=NLI98_08740 NZ_CP100601.1 Protein Homology CDS 1841175 1841927 . - 0 ID=cds-WP_223177665.1;Parent=gene-NLI98_RS08745;Dbxref=Genbank:WP_223177665.1;Name=WP_223177665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212963.1;locus_tag=NLI98_RS08745;product=LysR substrate-binding domain-containing protein;protein_id=WP_223177665.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1842280 1842355 . - . ID=gene-NLI98_RS08750;Name=NLI98_RS08750;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS08750;old_locus_tag=NLI98_08745 NZ_CP100601.1 tRNAscan-SE tRNA 1842280 1842355 . - . ID=rna-NLI98_RS08750;Parent=gene-NLI98_RS08750;anticodon=(pos:complement(1842320..1842322));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS08750;product=tRNA-Asn NZ_CP100601.1 tRNAscan-SE exon 1842280 1842355 . - . ID=exon-NLI98_RS08750-1;Parent=rna-NLI98_RS08750;anticodon=(pos:complement(1842320..1842322));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS08750;product=tRNA-Asn NZ_CP100601.1 RefSeq gene 1842456 1843256 . - . ID=gene-NLI98_RS08755;Name=mtfA;gbkey=Gene;gene=mtfA;gene_biotype=protein_coding;locus_tag=NLI98_RS08755;old_locus_tag=NLI98_08750 NZ_CP100601.1 Protein Homology CDS 1842456 1843256 . - 0 ID=cds-WP_172676873.1;Parent=gene-NLI98_RS08755;Dbxref=Genbank:WP_172676873.1;Name=WP_172676873.1;Ontology_term=GO:0008237;gbkey=CDS;gene=mtfA;go_function=metallopeptidase activity|0008237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227754.1;locus_tag=NLI98_RS08755;product=DgsA anti-repressor MtfA;protein_id=WP_172676873.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1843347 1843436 . + . ID=gene-NLI98_RS08760;Name=NLI98_RS08760;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS08760;old_locus_tag=NLI98_08755 NZ_CP100601.1 tRNAscan-SE tRNA 1843347 1843436 . + . ID=rna-NLI98_RS08760;Parent=gene-NLI98_RS08760;anticodon=(pos:1843381..1843383);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS08760;product=tRNA-Ser NZ_CP100601.1 tRNAscan-SE exon 1843347 1843436 . + . ID=exon-NLI98_RS08760-1;Parent=rna-NLI98_RS08760;anticodon=(pos:1843381..1843383);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS08760;product=tRNA-Ser NZ_CP100601.1 RefSeq gene 1843709 1844854 . - . ID=gene-NLI98_RS08765;Name=ompC;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=NLI98_RS08765;old_locus_tag=NLI98_08760 NZ_CP100601.1 Protein Homology CDS 1843709 1844854 . - 0 ID=cds-WP_002911596.1;Parent=gene-NLI98_RS08765;Dbxref=Genbank:WP_002911596.1;Name=WP_002911596.1;Ontology_term=GO:0034220,GO:0015288;gbkey=CDS;gene=ompC;go_function=porin activity|0015288||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227753.1;locus_tag=NLI98_RS08765;product=porin OmpC;protein_id=WP_002911596.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1845393 1845674 . + . ID=gene-NLI98_RS08770;Name=drpB;gbkey=Gene;gene=drpB;gene_biotype=protein_coding;locus_tag=NLI98_RS08770;old_locus_tag=NLI98_08765 NZ_CP100601.1 Protein Homology CDS 1845393 1845674 . + 0 ID=cds-WP_004151461.1;Parent=gene-NLI98_RS08770;Dbxref=Genbank:WP_004151461.1;Name=WP_004151461.1;gbkey=CDS;gene=drpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019725580.1;locus_tag=NLI98_RS08770;product=cell division protein DrpB;protein_id=WP_004151461.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1845717 1846424 . + . ID=gene-NLI98_RS08775;Name=NLI98_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08775;old_locus_tag=NLI98_08770 NZ_CP100601.1 Protein Homology CDS 1845717 1846424 . + 0 ID=cds-WP_002911594.1;Parent=gene-NLI98_RS08775;Dbxref=Genbank:WP_002911594.1;Name=WP_002911594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227750.1;locus_tag=NLI98_RS08775;product=phosphohydrolase;protein_id=WP_002911594.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1846501 1847901 . + . ID=gene-NLI98_RS08780;Name=NLI98_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08780;old_locus_tag=NLI98_08775 NZ_CP100601.1 Protein Homology CDS 1846501 1847901 . + 0 ID=cds-WP_264452224.1;Parent=gene-NLI98_RS08780;Dbxref=Genbank:WP_264452224.1;Name=WP_264452224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227749.1;locus_tag=NLI98_RS08780;product=DNA cytosine methyltransferase;protein_id=WP_264452224.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1847882 1848376 . + . ID=gene-NLI98_RS08785;Name=NLI98_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08785;old_locus_tag=NLI98_08780 NZ_CP100601.1 Protein Homology CDS 1847882 1848376 . + 0 ID=cds-WP_004200342.1;Parent=gene-NLI98_RS08785;Dbxref=Genbank:WP_004200342.1;Name=WP_004200342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227748.1;locus_tag=NLI98_RS08785;product=very short patch repair endonuclease;protein_id=WP_004200342.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1848351 1849262 . - . ID=gene-NLI98_RS08790;Name=yedA;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=NLI98_RS08790;old_locus_tag=NLI98_08785 NZ_CP100601.1 Protein Homology CDS 1848351 1849262 . - 0 ID=cds-WP_004184683.1;Parent=gene-NLI98_RS08790;Dbxref=Genbank:WP_004184683.1;Name=WP_004184683.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yedA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227747.1;locus_tag=NLI98_RS08790;product=drug/metabolite exporter YedA;protein_id=WP_004184683.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1849446 1850357 . + . ID=gene-NLI98_RS08795;Name=NLI98_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08795;old_locus_tag=NLI98_08790 NZ_CP100601.1 Protein Homology CDS 1849446 1850357 . + 0 ID=cds-WP_002911591.1;Parent=gene-NLI98_RS08795;Dbxref=Genbank:WP_002911591.1;Name=WP_002911591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227746.1;locus_tag=NLI98_RS08795;product=DUF808 domain-containing protein;protein_id=WP_002911591.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1850473 1852152 . + . ID=gene-NLI98_RS08800;Name=dgcQ;gbkey=Gene;gene=dgcQ;gene_biotype=protein_coding;locus_tag=NLI98_RS08800;old_locus_tag=NLI98_08795 NZ_CP100601.1 Protein Homology CDS 1850473 1852152 . + 0 ID=cds-WP_038435455.1;Parent=gene-NLI98_RS08800;Dbxref=Genbank:WP_038435455.1;Name=WP_038435455.1;gbkey=CDS;gene=dgcQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004175394.1;locus_tag=NLI98_RS08800;product=cellulose biosynthesis regulator diguanylate cyclase DgcQ;protein_id=WP_038435455.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1852452 1852673 . - . ID=gene-NLI98_RS08805;Name=NLI98_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08805;old_locus_tag=NLI98_08800 NZ_CP100601.1 Protein Homology CDS 1852452 1852673 . - 0 ID=cds-WP_002911589.1;Parent=gene-NLI98_RS08805;Dbxref=Genbank:WP_002911589.1;Name=WP_002911589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227744.1;locus_tag=NLI98_RS08805;product=DUF2525 domain-containing protein;protein_id=WP_002911589.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1852807 1852998 . + . ID=gene-NLI98_RS08810;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=NLI98_RS08810;old_locus_tag=NLI98_08805 NZ_CP100601.1 Protein Homology CDS 1852807 1852998 . + 0 ID=cds-WP_002911586.1;Parent=gene-NLI98_RS08810;Dbxref=Genbank:WP_002911586.1;Name=WP_002911586.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227743.1;locus_tag=NLI98_RS08810;product=protein DsrB;protein_id=WP_002911586.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1853031 1853654 . - . ID=gene-NLI98_RS08815;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=NLI98_RS08815;old_locus_tag=NLI98_08810 NZ_CP100601.1 Protein Homology CDS 1853031 1853654 . - 0 ID=cds-WP_023316165.1;Parent=gene-NLI98_RS08815;Dbxref=Genbank:WP_023316165.1;Name=WP_023316165.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rcsA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227742.1;locus_tag=NLI98_RS08815;product=transcriptional regulator RcsA;protein_id=WP_023316165.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1854027 1854461 . + . ID=gene-NLI98_RS08820;Name=NLI98_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08820;old_locus_tag=NLI98_08815 NZ_CP100601.1 Protein Homology CDS 1854027 1854461 . + 0 ID=cds-WP_072158563.1;Parent=gene-NLI98_RS08820;Dbxref=Genbank:WP_072158563.1;Name=WP_072158563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227741.1;locus_tag=NLI98_RS08820;product=lipoprotein;protein_id=WP_072158563.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1854503 1855990 . - . ID=gene-NLI98_RS08825;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=NLI98_RS08825;old_locus_tag=NLI98_08820 NZ_CP100601.1 Protein Homology CDS 1854503 1855990 . - 0 ID=cds-WP_004175398.1;Parent=gene-NLI98_RS08825;Dbxref=Genbank:WP_004175398.1;Name=WP_004175398.1;Ontology_term=GO:0005975,GO:0004553,GO:0005509;gbkey=CDS;gene=amyA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,calcium ion binding|0005509||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136602.1;locus_tag=NLI98_RS08825;product=alpha-amylase;protein_id=WP_004175398.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1856191 1856991 . + . ID=gene-NLI98_RS08830;Name=tcyJ;gbkey=Gene;gene=tcyJ;gene_biotype=protein_coding;locus_tag=NLI98_RS08830;old_locus_tag=NLI98_08825 NZ_CP100601.1 Protein Homology CDS 1856191 1856991 . + 0 ID=cds-WP_004141135.1;Parent=gene-NLI98_RS08830;Dbxref=Genbank:WP_004141135.1;Name=WP_004141135.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=tcyJ;go_component=membrane|0016020||IEA;go_function=ligand-gated ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227739.1;locus_tag=NLI98_RS08830;product=cystine ABC transporter substrate-binding protein;protein_id=WP_004141135.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1857087 1858073 . + . ID=gene-NLI98_RS08835;Name=dcyD;gbkey=Gene;gene=dcyD;gene_biotype=protein_coding;locus_tag=NLI98_RS08835;old_locus_tag=NLI98_08830 NZ_CP100601.1 Protein Homology CDS 1857087 1858073 . + 0 ID=cds-WP_004141132.1;Parent=gene-NLI98_RS08835;Dbxref=Genbank:WP_004141132.1;Name=WP_004141132.1;Ontology_term=GO:0019148;gbkey=CDS;gene=dcyD;go_function=D-cysteine desulfhydrase activity|0019148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227738.1;locus_tag=NLI98_RS08835;product=D-cysteine desulfhydrase;protein_id=WP_004141132.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1858089 1858757 . + . ID=gene-NLI98_RS08840;Name=tcyL;gbkey=Gene;gene=tcyL;gene_biotype=protein_coding;locus_tag=NLI98_RS08840;old_locus_tag=NLI98_08835 NZ_CP100601.1 Protein Homology CDS 1858089 1858757 . + 0 ID=cds-WP_002911547.1;Parent=gene-NLI98_RS08840;Dbxref=Genbank:WP_002911547.1;Name=WP_002911547.1;gbkey=CDS;gene=tcyL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227737.1;locus_tag=NLI98_RS08840;product=cystine ABC transporter permease;protein_id=WP_002911547.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1858754 1859506 . + . ID=gene-NLI98_RS08845;Name=yecC;gbkey=Gene;gene=yecC;gene_biotype=protein_coding;locus_tag=NLI98_RS08845;old_locus_tag=NLI98_08840 NZ_CP100601.1 Protein Homology CDS 1858754 1859506 . + 0 ID=cds-WP_004151455.1;Parent=gene-NLI98_RS08845;Dbxref=Genbank:WP_004151455.1;Name=WP_004151455.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=yecC;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416427.1;locus_tag=NLI98_RS08845;product=L-cystine ABC transporter ATP-binding protein YecC;protein_id=WP_004151455.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1859824 1860546 . + . ID=gene-NLI98_RS08850;Name=sdiA;gbkey=Gene;gene=sdiA;gene_biotype=protein_coding;locus_tag=NLI98_RS08850;old_locus_tag=NLI98_08845 NZ_CP100601.1 Protein Homology CDS 1859824 1860546 . + 0 ID=cds-WP_002911542.1;Parent=gene-NLI98_RS08850;Dbxref=Genbank:WP_002911542.1;Name=WP_002911542.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=sdiA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227735.1;locus_tag=NLI98_RS08850;product=transcriptional regulator SdiA;protein_id=WP_002911542.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1860614 1860838 . - . ID=gene-NLI98_RS08855;Name=NLI98_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08855;old_locus_tag=NLI98_08850 NZ_CP100601.1 Protein Homology CDS 1860614 1860838 . - 0 ID=cds-WP_002911541.1;Parent=gene-NLI98_RS08855;Dbxref=Genbank:WP_002911541.1;Name=WP_002911541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227734.1;locus_tag=NLI98_RS08855;product=DUF2594 family protein;protein_id=WP_002911541.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1861300 1861956 . + . ID=gene-NLI98_RS08860;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=NLI98_RS08860;old_locus_tag=NLI98_08855 NZ_CP100601.1 Protein Homology CDS 1861300 1861956 . + 0 ID=cds-WP_002911539.1;Parent=gene-NLI98_RS08860;Dbxref=Genbank:WP_002911539.1;Name=WP_002911539.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=uvrY;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310679.1;locus_tag=NLI98_RS08860;product=UvrY/SirA/GacA family response regulator transcription factor;protein_id=WP_002911539.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1861953 1863785 . + . ID=gene-NLI98_RS08865;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=NLI98_RS08865;old_locus_tag=NLI98_08860 NZ_CP100601.1 Protein Homology CDS 1861953 1863785 . + 0 ID=cds-WP_002911538.1;Parent=gene-NLI98_RS08865;Dbxref=Genbank:WP_002911538.1;Name=WP_002911538.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227732.1;locus_tag=NLI98_RS08865;product=excinuclease ABC subunit UvrC;protein_id=WP_002911538.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1863843 1864391 . + . ID=gene-NLI98_RS08870;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=NLI98_RS08870;old_locus_tag=NLI98_08865 NZ_CP100601.1 Protein Homology CDS 1863843 1864391 . + 0 ID=cds-WP_004141115.1;Parent=gene-NLI98_RS08870;Dbxref=Genbank:WP_004141115.1;Name=WP_004141115.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310677.1;locus_tag=NLI98_RS08870;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_004141115.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1864542 1864617 . + . ID=gene-NLI98_RS08875;Name=NLI98_RS08875;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS08875;old_locus_tag=NLI98_08870 NZ_CP100601.1 tRNAscan-SE tRNA 1864542 1864617 . + . ID=rna-NLI98_RS08875;Parent=gene-NLI98_RS08875;anticodon=(pos:1864575..1864577);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS08875;product=tRNA-Gly NZ_CP100601.1 tRNAscan-SE exon 1864542 1864617 . + . ID=exon-NLI98_RS08875-1;Parent=rna-NLI98_RS08875;anticodon=(pos:1864575..1864577);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS08875;product=tRNA-Gly NZ_CP100601.1 RefSeq gene 1864658 1864731 . + . ID=gene-NLI98_RS08880;Name=NLI98_RS08880;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS08880;old_locus_tag=NLI98_08875 NZ_CP100601.1 tRNAscan-SE tRNA 1864658 1864731 . + . ID=rna-NLI98_RS08880;Parent=gene-NLI98_RS08880;anticodon=(pos:1864690..1864692);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS08880;product=tRNA-Cys NZ_CP100601.1 tRNAscan-SE exon 1864658 1864731 . + . ID=exon-NLI98_RS08880-1;Parent=rna-NLI98_RS08880;anticodon=(pos:1864690..1864692);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS08880;product=tRNA-Cys NZ_CP100601.1 RefSeq gene 1864745 1864831 . + . ID=gene-NLI98_RS08885;Name=NLI98_RS08885;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS08885;old_locus_tag=NLI98_08880 NZ_CP100601.1 tRNAscan-SE tRNA 1864745 1864831 . + . ID=rna-NLI98_RS08885;Parent=gene-NLI98_RS08885;anticodon=(pos:1864779..1864781);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS08885;product=tRNA-Leu NZ_CP100601.1 tRNAscan-SE exon 1864745 1864831 . + . ID=exon-NLI98_RS08885-1;Parent=rna-NLI98_RS08885;anticodon=(pos:1864779..1864781);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS08885;product=tRNA-Leu NZ_CP100601.1 RefSeq gene 1865059 1865940 . + . ID=gene-NLI98_RS08890;Name=NLI98_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08890;old_locus_tag=NLI98_08885 NZ_CP100601.1 Protein Homology CDS 1865059 1865940 . + 0 ID=cds-WP_264452228.1;Parent=gene-NLI98_RS08890;Dbxref=Genbank:WP_264452228.1;Name=WP_264452228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227730.1;locus_tag=NLI98_RS08890;product=dihydrodipicolinate synthase family protein;protein_id=WP_264452228.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1866039 1866707 . + . ID=gene-NLI98_RS08895;Name=NLI98_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08895;old_locus_tag=NLI98_08890 NZ_CP100601.1 Protein Homology CDS 1866039 1866707 . + 0 ID=cds-WP_004141106.1;Parent=gene-NLI98_RS08895;Dbxref=Genbank:WP_004141106.1;Name=WP_004141106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004141106.1;locus_tag=NLI98_RS08895;product=YecA family protein;protein_id=WP_004141106.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1866732 1867943 . - . ID=gene-NLI98_RS08900;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=NLI98_RS08900;old_locus_tag=NLI98_08895 NZ_CP100601.1 Protein Homology CDS 1866732 1867943 . - 0 ID=cds-WP_004151453.1;Parent=gene-NLI98_RS08900;Dbxref=Genbank:WP_004151453.1;Name=WP_004151453.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227728.1;locus_tag=NLI98_RS08900;product=tyrosine transporter TyrP;protein_id=WP_004151453.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1868135 1868374 . + . ID=gene-NLI98_RS08905;Name=NLI98_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08905;old_locus_tag=NLI98_08900 NZ_CP100601.1 Protein Homology CDS 1868135 1868374 . + 0 ID=cds-WP_004175410.1;Parent=gene-NLI98_RS08905;Dbxref=Genbank:WP_004175410.1;Name=WP_004175410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227727.1;locus_tag=NLI98_RS08905;product=YecH family protein;protein_id=WP_004175410.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1868410 1868907 . - . ID=gene-NLI98_RS08910;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=NLI98_RS08910;old_locus_tag=NLI98_08905 NZ_CP100601.1 Protein Homology CDS 1868410 1868907 . - 0 ID=cds-WP_004141101.1;Parent=gene-NLI98_RS08910;Dbxref=Genbank:WP_004141101.1;Name=WP_004141101.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=cellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227726.1;locus_tag=NLI98_RS08910;product=non-heme ferritin;protein_id=WP_004141101.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1868965 1869144 . - . ID=gene-NLI98_RS08915;Name=NLI98_RS08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08915;old_locus_tag=NLI98_08910 NZ_CP100601.1 Protein Homology CDS 1868965 1869144 . - 0 ID=cds-WP_020801895.1;Parent=gene-NLI98_RS08915;Dbxref=Genbank:WP_020801895.1;Name=WP_020801895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227725.1;locus_tag=NLI98_RS08915;product=hypothetical protein;protein_id=WP_020801895.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1869316 1869954 . + . ID=gene-NLI98_RS08920;Name=NLI98_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08920;old_locus_tag=NLI98_08915 NZ_CP100601.1 Protein Homology CDS 1869316 1869954 . + 0 ID=cds-WP_002911528.1;Parent=gene-NLI98_RS08920;Dbxref=Genbank:WP_002911528.1;Name=WP_002911528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227724.1;locus_tag=NLI98_RS08920;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_002911528.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1870004 1871425 . - . ID=gene-NLI98_RS08925;Name=NLI98_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08925;old_locus_tag=NLI98_08920 NZ_CP100601.1 Protein Homology CDS 1870004 1871425 . - 0 ID=cds-WP_049000414.1;Parent=gene-NLI98_RS08925;Dbxref=Genbank:WP_049000414.1;Name=WP_049000414.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227723.1;locus_tag=NLI98_RS08925;product=MFS transporter;protein_id=WP_049000414.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1871576 1871827 . + . ID=gene-NLI98_RS08930;Name=NLI98_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08930;old_locus_tag=NLI98_08925 NZ_CP100601.1 Protein Homology CDS 1871576 1871827 . + 0 ID=cds-WP_002911524.1;Parent=gene-NLI98_RS08930;Dbxref=Genbank:WP_002911524.1;Name=WP_002911524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227722.1;locus_tag=NLI98_RS08930;product=DUF2766 domain-containing protein;protein_id=WP_002911524.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1871865 1873376 . - . ID=gene-NLI98_RS08935;Name=NLI98_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08935;old_locus_tag=NLI98_08930 NZ_CP100601.1 Protein Homology CDS 1871865 1873376 . - 0 ID=cds-WP_002911522.1;Parent=gene-NLI98_RS08935;Dbxref=Genbank:WP_002911522.1;Name=WP_002911522.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227721.1;locus_tag=NLI98_RS08935;product=MFS transporter;protein_id=WP_002911522.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1873442 1873600 . + . ID=gene-NLI98_RS08940;Name=NLI98_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08940;old_locus_tag=NLI98_08935 NZ_CP100601.1 Protein Homology CDS 1873442 1873600 . + 0 ID=cds-WP_032441031.1;Parent=gene-NLI98_RS08940;Dbxref=Genbank:WP_032441031.1;Name=WP_032441031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227720.1;locus_tag=NLI98_RS08940;product=hypothetical protein;protein_id=WP_032441031.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1873671 1874180 . - . ID=gene-NLI98_RS08945;Name=NLI98_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08945;old_locus_tag=NLI98_08940 NZ_CP100601.1 Protein Homology CDS 1873671 1874180 . - 0 ID=cds-WP_004175413.1;Parent=gene-NLI98_RS08945;Dbxref=Genbank:WP_004175413.1;Name=WP_004175413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227719.1;locus_tag=NLI98_RS08945;product=non-heme ferritin-like protein;protein_id=WP_004175413.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1874615 1874710 . - . ID=gene-NLI98_RS08950;Name=NLI98_RS08950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS08950;old_locus_tag=NLI98_08945;partial=true;pseudo=true;start_range=.,1874615 NZ_CP100601.1 Protein Homology CDS 1874615 1874710 . - 0 ID=cds-NLI98_RS08950;Parent=gene-NLI98_RS08950;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227718.1;locus_tag=NLI98_RS08950;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1874615;transl_table=11 NZ_CP100601.1 RefSeq gene 1875072 1876052 . + . ID=gene-NLI98_RS08955;Name=NLI98_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08955;old_locus_tag=NLI98_08950 NZ_CP100601.1 Protein Homology CDS 1875072 1876052 . + 0 ID=cds-WP_002911518.1;Parent=gene-NLI98_RS08955;Dbxref=Genbank:WP_002911518.1;Name=WP_002911518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227717.1;locus_tag=NLI98_RS08955;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_002911518.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1876115 1877629 . + . ID=gene-NLI98_RS08960;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=NLI98_RS08960;old_locus_tag=NLI98_08955 NZ_CP100601.1 Protein Homology CDS 1876115 1877629 . + 0 ID=cds-WP_002911516.1;Parent=gene-NLI98_RS08960;Dbxref=Genbank:WP_002911516.1;Name=WP_002911516.1;Ontology_term=GO:0042882,GO:0005524,GO:0015612,GO:0016020;gbkey=CDS;gene=araG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type L-arabinose transporter activity|0015612||IEA;go_process=L-arabinose transmembrane transport|0042882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227716.1;locus_tag=NLI98_RS08960;product=L-arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_002911516.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1877644 1878624 . + . ID=gene-NLI98_RS08965;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=NLI98_RS08965;old_locus_tag=NLI98_08960 NZ_CP100601.1 Protein Homology CDS 1877644 1878624 . + 0 ID=cds-WP_002911507.1;Parent=gene-NLI98_RS08965;Dbxref=Genbank:WP_002911507.1;Name=WP_002911507.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=araH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227715.1;locus_tag=NLI98_RS08965;product=L-arabinose ABC transporter permease AraH;protein_id=WP_002911507.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1878786 1879574 . + . ID=gene-NLI98_RS08970;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=NLI98_RS08970;old_locus_tag=NLI98_08965 NZ_CP100601.1 Protein Homology CDS 1878786 1879574 . + 0 ID=cds-WP_002911505.1;Parent=gene-NLI98_RS08970;Dbxref=Genbank:WP_002911505.1;Name=WP_002911505.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227714.1;locus_tag=NLI98_RS08970;product=trehalose-phosphatase;protein_id=WP_002911505.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1879549 1880973 . + . ID=gene-NLI98_RS08975;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=NLI98_RS08975;old_locus_tag=NLI98_08970 NZ_CP100601.1 Protein Homology CDS 1879549 1880973 . + 0 ID=cds-WP_004175414.1;Parent=gene-NLI98_RS08975;Dbxref=Genbank:WP_004175414.1;Name=WP_004175414.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227713.1;locus_tag=NLI98_RS08975;product=alpha%2Calpha-trehalose-phosphate synthase;protein_id=WP_004175414.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1880997 1881425 . - . ID=gene-NLI98_RS08980;Name=uspC;gbkey=Gene;gene=uspC;gene_biotype=protein_coding;locus_tag=NLI98_RS08980;old_locus_tag=NLI98_08975 NZ_CP100601.1 Protein Homology CDS 1880997 1881425 . - 0 ID=cds-WP_019725451.1;Parent=gene-NLI98_RS08980;Dbxref=Genbank:WP_019725451.1;Name=WP_019725451.1;gbkey=CDS;gene=uspC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227712.1;locus_tag=NLI98_RS08980;product=universal stress protein UspC;protein_id=WP_019725451.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1881778 1883361 . + . ID=gene-NLI98_RS08985;Name=NLI98_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08985;old_locus_tag=NLI98_08980 NZ_CP100601.1 Protein Homology CDS 1881778 1883361 . + 0 ID=cds-WP_002911499.1;Parent=gene-NLI98_RS08985;Dbxref=Genbank:WP_002911499.1;Name=WP_002911499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227711.1;locus_tag=NLI98_RS08985;product=MFS transporter;protein_id=WP_002911499.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1883366 1884505 . + . ID=gene-NLI98_RS08990;Name=NLI98_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS08990;old_locus_tag=NLI98_08985 NZ_CP100601.1 Protein Homology CDS 1883366 1884505 . + 0 ID=cds-WP_002911497.1;Parent=gene-NLI98_RS08990;Dbxref=Genbank:WP_002911497.1;Name=WP_002911497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227710.1;locus_tag=NLI98_RS08990;product=glycoside hydrolase family 105 protein;protein_id=WP_002911497.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1884567 1886300 . - . ID=gene-NLI98_RS08995;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=NLI98_RS08995;old_locus_tag=NLI98_08990 NZ_CP100601.1 Protein Homology CDS 1884567 1886300 . - 0 ID=cds-WP_004151452.1;Parent=gene-NLI98_RS08995;Dbxref=Genbank:WP_004151452.1;Name=WP_004151452.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001025321.1;locus_tag=NLI98_RS08995;product=arginine--tRNA ligase;protein_id=WP_004151452.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1886536 1887105 . + . ID=gene-NLI98_RS09000;Name=NLI98_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09000;old_locus_tag=NLI98_08995 NZ_CP100601.1 Protein Homology CDS 1886536 1887105 . + 0 ID=cds-WP_008804239.1;Parent=gene-NLI98_RS09000;Dbxref=Genbank:WP_008804239.1;Name=WP_008804239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227708.1;locus_tag=NLI98_RS09000;product=VOC family protein;protein_id=WP_008804239.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1887182 1887925 . + . ID=gene-NLI98_RS09005;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=NLI98_RS09005;old_locus_tag=NLI98_09000 NZ_CP100601.1 Protein Homology CDS 1887182 1887925 . + 0 ID=cds-WP_004145568.1;Parent=gene-NLI98_RS09005;Dbxref=Genbank:WP_004145568.1;Name=WP_004145568.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227707.1;locus_tag=NLI98_RS09005;product=copper homeostasis protein CutC;protein_id=WP_004145568.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1888007 1889011 . - . ID=gene-NLI98_RS09010;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=NLI98_RS09010;old_locus_tag=NLI98_09005 NZ_CP100601.1 Protein Homology CDS 1888007 1889011 . - 0 ID=cds-WP_023157963.1;Parent=gene-NLI98_RS09010;Dbxref=Genbank:WP_023157963.1;Name=WP_023157963.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227706.1;locus_tag=NLI98_RS09010;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_023157963.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1889008 1889751 . - . ID=gene-NLI98_RS09015;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=NLI98_RS09015;old_locus_tag=NLI98_09010 NZ_CP100601.1 Protein Homology CDS 1889008 1889751 . - 0 ID=cds-WP_002911486.1;Parent=gene-NLI98_RS09015;Dbxref=Genbank:WP_002911486.1;Name=WP_002911486.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227705.1;locus_tag=NLI98_RS09015;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_002911486.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1889791 1890186 . - . ID=gene-NLI98_RS09020;Name=NLI98_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09020;old_locus_tag=NLI98_09015 NZ_CP100601.1 Protein Homology CDS 1889791 1890186 . - 0 ID=cds-WP_023157964.1;Parent=gene-NLI98_RS09020;Dbxref=Genbank:WP_023157964.1;Name=WP_023157964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227704.1;locus_tag=NLI98_RS09020;product=MAPEG family protein;protein_id=WP_023157964.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1890239 1891057 . - . ID=gene-NLI98_RS09025;Name=NLI98_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09025;old_locus_tag=NLI98_09020 NZ_CP100601.1 Protein Homology CDS 1890239 1891057 . - 0 ID=cds-WP_088498037.1;Parent=gene-NLI98_RS09025;Dbxref=Genbank:WP_088498037.1;Name=WP_088498037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227703.1;locus_tag=NLI98_RS09025;product=DUF72 domain-containing protein;protein_id=WP_088498037.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1891054 1891620 . - . ID=gene-NLI98_RS09030;Name=NLI98_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09030;old_locus_tag=NLI98_09025 NZ_CP100601.1 Protein Homology CDS 1891054 1891620 . - 0 ID=cds-WP_004145564.1;Parent=gene-NLI98_RS09030;Dbxref=Genbank:WP_004145564.1;Name=WP_004145564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227702.1;locus_tag=NLI98_RS09030;product=hydrolase;protein_id=WP_004145564.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1891888 1893675 . + . ID=gene-NLI98_RS09035;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=NLI98_RS09035;old_locus_tag=NLI98_09030 NZ_CP100601.1 Protein Homology CDS 1891888 1893675 . + 0 ID=cds-WP_002911479.1;Parent=gene-NLI98_RS09035;Dbxref=Genbank:WP_002911479.1;Name=WP_002911479.1;Ontology_term=GO:0006422,GO:0004815,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227701.1;locus_tag=NLI98_RS09035;product=aspartate--tRNA ligase;protein_id=WP_002911479.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1893677 1894120 . + . ID=gene-NLI98_RS09040;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=NLI98_RS09040;old_locus_tag=NLI98_09035 NZ_CP100601.1 Protein Homology CDS 1893677 1894120 . + 0 ID=cds-WP_002911477.1;Parent=gene-NLI98_RS09040;Dbxref=Genbank:WP_002911477.1;Name=WP_002911477.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227700.1;locus_tag=NLI98_RS09040;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_002911477.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1894148 1894888 . + . ID=gene-NLI98_RS09045;Name=NLI98_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09045;old_locus_tag=NLI98_09040 NZ_CP100601.1 Protein Homology CDS 1894148 1894888 . + 0 ID=cds-WP_002911459.1;Parent=gene-NLI98_RS09045;Dbxref=Genbank:WP_002911459.1;Name=WP_002911459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000907250.1;locus_tag=NLI98_RS09045;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_002911459.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1894923 1895444 . + . ID=gene-NLI98_RS09050;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=NLI98_RS09050;old_locus_tag=NLI98_09045 NZ_CP100601.1 Protein Homology CDS 1894923 1895444 . + 0 ID=cds-WP_002911456.1;Parent=gene-NLI98_RS09050;Dbxref=Genbank:WP_002911456.1;Name=WP_002911456.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005068993.1;locus_tag=NLI98_RS09050;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_002911456.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1895524 1896135 . + . ID=gene-NLI98_RS09055;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=NLI98_RS09055;old_locus_tag=NLI98_09050 NZ_CP100601.1 Protein Homology CDS 1895524 1896135 . + 0 ID=cds-WP_002911454.1;Parent=gene-NLI98_RS09055;Dbxref=Genbank:WP_002911454.1;Name=WP_002911454.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131997.1;locus_tag=NLI98_RS09055;product=Holliday junction branch migration protein RuvA;protein_id=WP_002911454.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1896144 1897154 . + . ID=gene-NLI98_RS09060;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=NLI98_RS09060;old_locus_tag=NLI98_09055 NZ_CP100601.1 Protein Homology CDS 1896144 1897154 . + 0 ID=cds-WP_004148860.1;Parent=gene-NLI98_RS09060;Dbxref=Genbank:WP_004148860.1;Name=WP_004148860.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227696.1;locus_tag=NLI98_RS09060;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_004148860.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1897218 1898003 . - . ID=gene-NLI98_RS09065;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=NLI98_RS09065;old_locus_tag=NLI98_09060 NZ_CP100601.1 Protein Homology CDS 1897218 1898003 . - 0 ID=cds-WP_088498038.1;Parent=gene-NLI98_RS09065;Dbxref=Genbank:WP_088498038.1;Name=WP_088498038.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227695.1;locus_tag=NLI98_RS09065;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_088498038.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1898003 1898755 . - . ID=gene-NLI98_RS09070;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=NLI98_RS09070;old_locus_tag=NLI98_09065 NZ_CP100601.1 Protein Homology CDS 1898003 1898755 . - 0 ID=cds-WP_002911449.1;Parent=gene-NLI98_RS09070;Dbxref=Genbank:WP_002911449.1;Name=WP_002911449.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203406.1;locus_tag=NLI98_RS09070;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_002911449.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1898834 1899778 . + . ID=gene-NLI98_RS09075;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=NLI98_RS09075;old_locus_tag=NLI98_09070 NZ_CP100601.1 Protein Homology CDS 1898834 1899778 . + 0 ID=cds-WP_004180437.1;Parent=gene-NLI98_RS09075;Dbxref=Genbank:WP_004180437.1;Name=WP_004180437.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227693.1;locus_tag=NLI98_RS09075;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_004180437.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1899794 1901113 . + . ID=gene-NLI98_RS09080;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=NLI98_RS09080;old_locus_tag=NLI98_09075 NZ_CP100601.1 Protein Homology CDS 1899794 1901113 . + 0 ID=cds-WP_004148858.1;Parent=gene-NLI98_RS09080;Dbxref=Genbank:WP_004148858.1;Name=WP_004148858.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227692.1;locus_tag=NLI98_RS09080;product=murein DD-endopeptidase MepM;protein_id=WP_004148858.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1901231 1902205 . + . ID=gene-NLI98_RS09085;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=NLI98_RS09085;old_locus_tag=NLI98_09080 NZ_CP100601.1 Protein Homology CDS 1901231 1902205 . + 0 ID=cds-WP_002911442.1;Parent=gene-NLI98_RS09085;Dbxref=Genbank:WP_002911442.1;Name=WP_002911442.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009245,GO:0016746;gbkey=CDS;gene=lpxM;go_function=acyltransferase activity|0016746||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227691.1;locus_tag=NLI98_RS09085;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_002911442.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1902246 1903688 . - . ID=gene-NLI98_RS09090;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=NLI98_RS09090;old_locus_tag=NLI98_09085 NZ_CP100601.1 Protein Homology CDS 1902246 1903688 . - 0 ID=cds-WP_002911440.1;Parent=gene-NLI98_RS09090;Dbxref=Genbank:WP_002911440.1;Name=WP_002911440.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120709.1;locus_tag=NLI98_RS09090;product=pyruvate kinase;protein_id=WP_002911440.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1903814 1904719 . - . ID=gene-NLI98_RS09095;Name=NLI98_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09095;old_locus_tag=NLI98_09090 NZ_CP100601.1 Protein Homology CDS 1903814 1904719 . - 0 ID=cds-WP_075212399.1;Parent=gene-NLI98_RS09095;Dbxref=Genbank:WP_075212399.1;Name=WP_075212399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227689.1;locus_tag=NLI98_RS09095;product=MurR/RpiR family transcriptional regulator;protein_id=WP_075212399.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1904879 1905028 . + . ID=gene-NLI98_RS09100;Name=NLI98_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09100;old_locus_tag=NLI98_09095 NZ_CP100601.1 Protein Homology CDS 1904879 1905028 . + 0 ID=cds-WP_004145554.1;Parent=gene-NLI98_RS09100;Dbxref=Genbank:WP_004145554.1;Name=WP_004145554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227688.1;locus_tag=NLI98_RS09100;product=hypothetical protein;protein_id=WP_004145554.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1905039 1906514 . + . ID=gene-NLI98_RS09105;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=NLI98_RS09105;old_locus_tag=NLI98_09100 NZ_CP100601.1 Protein Homology CDS 1905039 1906514 . + 0 ID=cds-WP_002911427.1;Parent=gene-NLI98_RS09105;Dbxref=Genbank:WP_002911427.1;Name=WP_002911427.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120712.1;locus_tag=NLI98_RS09105;product=glucose-6-phosphate dehydrogenase;protein_id=WP_002911427.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1906737 1908548 . + . ID=gene-NLI98_RS09110;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=NLI98_RS09110;old_locus_tag=NLI98_09105 NZ_CP100601.1 Protein Homology CDS 1906737 1908548 . + 0 ID=cds-WP_002911425.1;Parent=gene-NLI98_RS09110;Dbxref=Genbank:WP_002911425.1;Name=WP_002911425.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310588.1;locus_tag=NLI98_RS09110;product=phosphogluconate dehydratase;protein_id=WP_002911425.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1908587 1909228 . + . ID=gene-NLI98_RS09115;Name=NLI98_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09115;old_locus_tag=NLI98_09110 NZ_CP100601.1 Protein Homology CDS 1908587 1909228 . + 0 ID=cds-WP_002911423.1;Parent=gene-NLI98_RS09115;Dbxref=Genbank:WP_002911423.1;Name=WP_002911423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227683.1;locus_tag=NLI98_RS09115;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_002911423.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1909286 1910464 . - . ID=gene-NLI98_RS09120;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=NLI98_RS09120;old_locus_tag=NLI98_09115 NZ_CP100601.1 Protein Homology CDS 1909286 1910464 . - 0 ID=cds-WP_088498039.1;Parent=gene-NLI98_RS09120;Dbxref=Genbank:WP_088498039.1;Name=WP_088498039.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227682.1;locus_tag=NLI98_RS09120;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_088498039.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1910609 1910956 . + . ID=gene-NLI98_RS09125;Name=NLI98_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09125;old_locus_tag=NLI98_09120 NZ_CP100601.1 Protein Homology CDS 1910609 1910956 . + 0 ID=cds-WP_004175424.1;Parent=gene-NLI98_RS09125;Dbxref=Genbank:WP_004175424.1;Name=WP_004175424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227681.1;locus_tag=NLI98_RS09125;product=YebG family protein;protein_id=WP_004175424.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1911096 1911755 . + . ID=gene-NLI98_RS09130;Name=NLI98_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09130;old_locus_tag=NLI98_09125 NZ_CP100601.1 Protein Homology CDS 1911096 1911755 . + 0 ID=cds-WP_004145550.1;Parent=gene-NLI98_RS09130;Dbxref=Genbank:WP_004145550.1;Name=WP_004145550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227680.1;locus_tag=NLI98_RS09130;product=tellurite resistance TerB family protein;protein_id=WP_004145550.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1911876 1913936 . + . ID=gene-NLI98_RS09135;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=NLI98_RS09135;old_locus_tag=NLI98_09130 NZ_CP100601.1 Protein Homology CDS 1911876 1913936 . + 0 ID=cds-WP_004151449.1;Parent=gene-NLI98_RS09135;Dbxref=Genbank:WP_004151449.1;Name=WP_004151449.1;gbkey=CDS;gene=ptrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804266.1;locus_tag=NLI98_RS09135;product=oligopeptidase B;protein_id=WP_004151449.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1913940 1914599 . - . ID=gene-NLI98_RS09140;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=NLI98_RS09140;old_locus_tag=NLI98_09135 NZ_CP100601.1 Protein Homology CDS 1913940 1914599 . - 0 ID=cds-WP_002911407.1;Parent=gene-NLI98_RS09140;Dbxref=Genbank:WP_002911407.1;Name=WP_002911407.1;gbkey=CDS;gene=exoX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227677.1;locus_tag=NLI98_RS09140;product=exodeoxyribonuclease X;protein_id=WP_002911407.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1914678 1914908 . - . ID=gene-NLI98_RS09145;Name=NLI98_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09145;old_locus_tag=NLI98_09140 NZ_CP100601.1 Protein Homology CDS 1914678 1914908 . - 0 ID=cds-WP_002911406.1;Parent=gene-NLI98_RS09145;Dbxref=Genbank:WP_002911406.1;Name=WP_002911406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227676.1;locus_tag=NLI98_RS09145;product=DNA polymerase III subunit theta;protein_id=WP_002911406.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1915021 1915395 . + . ID=gene-NLI98_RS09150;Name=yobA;gbkey=Gene;gene=yobA;gene_biotype=protein_coding;locus_tag=NLI98_RS09150;old_locus_tag=NLI98_09145 NZ_CP100601.1 Protein Homology CDS 1915021 1915395 . + 0 ID=cds-WP_004151448.1;Parent=gene-NLI98_RS09150;Dbxref=Genbank:WP_004151448.1;Name=WP_004151448.1;Ontology_term=GO:0006825,GO:0005507;gbkey=CDS;gene=yobA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227675.1;locus_tag=NLI98_RS09150;product=CopC domain-containing protein YobA;protein_id=WP_004151448.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1915399 1916268 . + . ID=gene-NLI98_RS09155;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=NLI98_RS09155;old_locus_tag=NLI98_09150 NZ_CP100601.1 Protein Homology CDS 1915399 1916268 . + 0 ID=cds-WP_004151447.1;Parent=gene-NLI98_RS09155;Dbxref=Genbank:WP_004151447.1;Name=WP_004151447.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227674.1;locus_tag=NLI98_RS09155;product=copper homeostasis membrane protein CopD;protein_id=WP_004151447.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1916285 1916623 . + . ID=gene-NLI98_RS09160;Name=NLI98_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09160;old_locus_tag=NLI98_09155 NZ_CP100601.1 Protein Homology CDS 1916285 1916623 . + 0 ID=cds-WP_002911404.1;Parent=gene-NLI98_RS09160;Dbxref=Genbank:WP_002911404.1;Name=WP_002911404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227673.1;locus_tag=NLI98_RS09160;product=YebY family protein;protein_id=WP_002911404.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1917259 1917402 . - . ID=gene-NLI98_RS09165;Name=NLI98_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09165;old_locus_tag=NLI98_09160 NZ_CP100601.1 Protein Homology CDS 1917259 1917402 . - 0 ID=cds-WP_002911398.1;Parent=gene-NLI98_RS09165;Dbxref=Genbank:WP_002911398.1;Name=WP_002911398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227672.1;locus_tag=NLI98_RS09165;product=Ecr family regulatory small membrane protein;protein_id=WP_002911398.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1917507 1918475 . - . ID=gene-NLI98_RS09170;Name=NLI98_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09170;old_locus_tag=NLI98_09165 NZ_CP100601.1 Protein Homology CDS 1917507 1918475 . - 0 ID=cds-WP_074181864.1;Parent=gene-NLI98_RS09170;Dbxref=Genbank:WP_074181864.1;Name=WP_074181864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227671.1;locus_tag=NLI98_RS09170;product=VirK/YbjX family protein;protein_id=WP_074181864.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1918632 1919285 . + . ID=gene-NLI98_RS09175;Name=pphA;gbkey=Gene;gene=pphA;gene_biotype=pseudogene;locus_tag=NLI98_RS09175;old_locus_tag=NLI98_09170;pseudo=true NZ_CP100601.1 Protein Homology CDS 1918632 1919285 . + 0 ID=cds-NLI98_RS09175;Parent=gene-NLI98_RS09175;Note=internal stop;Ontology_term=GO:0016787;gbkey=CDS;gene=pphA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227670.1;locus_tag=NLI98_RS09175;product=protein-serine/threonine phosphatase;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 1919282 1919473 . - . ID=gene-NLI98_RS09180;Name=NLI98_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09180;old_locus_tag=NLI98_09175 NZ_CP100601.1 Protein Homology CDS 1919282 1919473 . - 0 ID=cds-WP_002911395.1;Parent=gene-NLI98_RS09180;Dbxref=Genbank:WP_002911395.1;Name=WP_002911395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227669.1;locus_tag=NLI98_RS09180;product=YebW family protein;protein_id=WP_002911395.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1919571 1919810 . - . ID=gene-NLI98_RS09185;Name=NLI98_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09185;old_locus_tag=NLI98_09180 NZ_CP100601.1 Protein Homology CDS 1919571 1919810 . - 0 ID=cds-WP_002911393.1;Parent=gene-NLI98_RS09185;Dbxref=Genbank:WP_002911393.1;Name=WP_002911393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015705939.1;locus_tag=NLI98_RS09185;product=YebV family protein;protein_id=WP_002911393.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1919926 1921359 . - . ID=gene-NLI98_RS09190;Name=rsmF;gbkey=Gene;gene=rsmF;gene_biotype=protein_coding;locus_tag=NLI98_RS09190;old_locus_tag=NLI98_09185 NZ_CP100601.1 Protein Homology CDS 1919926 1921359 . - 0 ID=cds-WP_004148845.1;Parent=gene-NLI98_RS09190;Dbxref=Genbank:WP_004148845.1;Name=WP_004148845.1;Ontology_term=GO:0001510,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmF;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227667.1;locus_tag=NLI98_RS09190;product=16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF;protein_id=WP_004148845.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1921483 1924116 . - . ID=gene-NLI98_RS09195;Name=NLI98_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09195;old_locus_tag=NLI98_09190 NZ_CP100601.1 Protein Homology CDS 1921483 1924116 . - 0 ID=cds-WP_032435979.1;Parent=gene-NLI98_RS09195;Dbxref=Genbank:WP_032435979.1;Name=WP_032435979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227666.1;locus_tag=NLI98_RS09195;product=PqiB family protein;protein_id=WP_032435979.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1924085 1925368 . - . ID=gene-NLI98_RS09200;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=NLI98_RS09200;old_locus_tag=NLI98_09195 NZ_CP100601.1 Protein Homology CDS 1924085 1925368 . - 0 ID=cds-WP_002911387.1;Parent=gene-NLI98_RS09200;Dbxref=Genbank:WP_002911387.1;Name=WP_002911387.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227665.1;locus_tag=NLI98_RS09200;product=membrane integrity lipid transport subunit YebS;protein_id=WP_002911387.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1925501 1926014 . + . ID=gene-NLI98_RS09205;Name=NLI98_RS09205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS09205;old_locus_tag=NLI98_09200;pseudo=true NZ_CP100601.1 Protein Homology CDS 1925501 1926014 . + 0 ID=cds-NLI98_RS09205;Parent=gene-NLI98_RS09205;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227664.1;locus_tag=NLI98_RS09205;product=GAF domain-containing protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 1926096 1926773 . + . ID=gene-NLI98_RS09210;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=NLI98_RS09210;old_locus_tag=NLI98_09205 NZ_CP100601.1 Protein Homology CDS 1926096 1926773 . + 0 ID=cds-WP_002911385.1;Parent=gene-NLI98_RS09210;Dbxref=Genbank:WP_002911385.1;Name=WP_002911385.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227663.1;locus_tag=NLI98_RS09210;product=RNA chaperone ProQ;protein_id=WP_002911385.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1926793 1928841 . + . ID=gene-NLI98_RS09215;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=NLI98_RS09215;old_locus_tag=NLI98_09210 NZ_CP100601.1 Protein Homology CDS 1926793 1928841 . + 0 ID=cds-WP_004145536.1;Parent=gene-NLI98_RS09215;Dbxref=Genbank:WP_004145536.1;Name=WP_004145536.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227662.1;locus_tag=NLI98_RS09215;product=carboxy terminal-processing peptidase;protein_id=WP_004145536.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1929077 1929961 . + . ID=gene-NLI98_RS09220;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=NLI98_RS09220;old_locus_tag=NLI98_09215 NZ_CP100601.1 Protein Homology CDS 1929077 1929961 . + 0 ID=cds-WP_002911381.1;Parent=gene-NLI98_RS09220;Dbxref=Genbank:WP_002911381.1;Name=WP_002911381.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229823.1;locus_tag=NLI98_RS09220;product=protease HtpX;protein_id=WP_002911381.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1930027 1931397 . - . ID=gene-NLI98_RS09225;Name=NLI98_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09225;old_locus_tag=NLI98_09220 NZ_CP100601.1 Protein Homology CDS 1930027 1931397 . - 0 ID=cds-WP_102024135.1;Parent=gene-NLI98_RS09225;Dbxref=Genbank:WP_102024135.1;Name=WP_102024135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004175444.1;locus_tag=NLI98_RS09225;product=MFS transporter;protein_id=WP_102024135.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1931575 1932366 . + . ID=gene-NLI98_RS09230;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=NLI98_RS09230;old_locus_tag=NLI98_09225 NZ_CP100601.1 Protein Homology CDS 1931575 1932366 . + 0 ID=cds-WP_002911378.1;Parent=gene-NLI98_RS09230;Dbxref=Genbank:WP_002911378.1;Name=WP_002911378.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=kdgR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227659.1;locus_tag=NLI98_RS09230;product=DNA-binding transcriptional regulator KdgR;protein_id=WP_002911378.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1932423 1932662 . - . ID=gene-NLI98_RS09235;Name=NLI98_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09235;old_locus_tag=NLI98_09230 NZ_CP100601.1 Protein Homology CDS 1932423 1932662 . - 0 ID=cds-WP_004145533.1;Parent=gene-NLI98_RS09235;Dbxref=Genbank:WP_004145533.1;Name=WP_004145533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227658.1;locus_tag=NLI98_RS09235;product=YobH family protein;protein_id=WP_004145533.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1932822 1932965 . + . ID=gene-NLI98_RS09240;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=NLI98_RS09240;old_locus_tag=NLI98_09235 NZ_CP100601.1 Protein Homology CDS 1932822 1932965 . + 0 ID=cds-WP_002911375.1;Parent=gene-NLI98_RS09240;Dbxref=Genbank:WP_002911375.1;Name=WP_002911375.1;gbkey=CDS;gene=mgrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366032.1;locus_tag=NLI98_RS09240;product=PhoP/PhoQ regulator MgrB;protein_id=WP_002911375.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1933040 1933330 . + . ID=gene-NLI98_RS09245;Name=NLI98_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09245;old_locus_tag=NLI98_09240 NZ_CP100601.1 Protein Homology CDS 1933040 1933330 . + 0 ID=cds-WP_002911374.1;Parent=gene-NLI98_RS09245;Dbxref=Genbank:WP_002911374.1;Name=WP_002911374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227656.1;locus_tag=NLI98_RS09245;product=YebO family protein;protein_id=WP_002911374.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1933921 1933992 . + . ID=gene-NLI98_RS09250;Name=NLI98_RS09250;end_range=1933992,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS09250;old_locus_tag=NLI98_09245;partial=true;pseudo=true NZ_CP100601.1 Protein Homology CDS 1933921 1933992 . + 0 ID=cds-NLI98_RS09250;Parent=gene-NLI98_RS09250;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1933992,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416338.1;locus_tag=NLI98_RS09250;partial=true;product=YobF family protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 1934078 1934287 . + . ID=gene-NLI98_RS09255;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=NLI98_RS09255;old_locus_tag=NLI98_09250 NZ_CP100601.1 Protein Homology CDS 1934078 1934287 . + 0 ID=cds-WP_001062678.1;Parent=gene-NLI98_RS09255;Dbxref=Genbank:WP_001062678.1;Name=WP_001062678.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310560.1;locus_tag=NLI98_RS09255;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_001062678.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1934475 1936223 . + . ID=gene-NLI98_RS09260;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=NLI98_RS09260;old_locus_tag=NLI98_09255 NZ_CP100601.1 Protein Homology CDS 1934475 1936223 . + 0 ID=cds-WP_002910924.1;Parent=gene-NLI98_RS09260;Dbxref=Genbank:WP_002910924.1;Name=WP_002910924.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227653.1;locus_tag=NLI98_RS09260;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_002910924.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1936285 1937079 . + . ID=gene-NLI98_RS09265;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=NLI98_RS09265;old_locus_tag=NLI98_09260 NZ_CP100601.1 Protein Homology CDS 1936285 1937079 . + 0 ID=cds-WP_002910922.1;Parent=gene-NLI98_RS09265;Dbxref=Genbank:WP_002910922.1;Name=WP_002910922.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227652.1;locus_tag=NLI98_RS09265;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_002910922.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1937083 1937649 . - . ID=gene-NLI98_RS09270;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=NLI98_RS09270;old_locus_tag=NLI98_09265 NZ_CP100601.1 Protein Homology CDS 1937083 1937649 . - 0 ID=cds-WP_002910921.1;Parent=gene-NLI98_RS09270;Dbxref=Genbank:WP_002910921.1;Name=WP_002910921.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227651.1;locus_tag=NLI98_RS09270;product=manganese efflux pump MntP;protein_id=WP_002910921.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1938068 1938526 . - . ID=gene-NLI98_RS09275;Name=NLI98_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09275;old_locus_tag=NLI98_09270 NZ_CP100601.1 Protein Homology CDS 1938068 1938526 . - 0 ID=cds-WP_040216159.1;Parent=gene-NLI98_RS09275;Dbxref=Genbank:WP_040216159.1;Name=WP_040216159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227650.1;locus_tag=NLI98_RS09275;product=DUF986 family protein;protein_id=WP_040216159.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1938589 1939440 . - . ID=gene-NLI98_RS09280;Name=NLI98_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09280;old_locus_tag=NLI98_09275 NZ_CP100601.1 Protein Homology CDS 1938589 1939440 . - 0 ID=cds-WP_004145526.1;Parent=gene-NLI98_RS09280;Dbxref=Genbank:WP_004145526.1;Name=WP_004145526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804907.1;locus_tag=NLI98_RS09280;product=PTS mannose transporter subunit IID;protein_id=WP_004145526.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1939453 1940253 . - . ID=gene-NLI98_RS09285;Name=NLI98_RS09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09285;old_locus_tag=NLI98_09280 NZ_CP100601.1 Protein Homology CDS 1939453 1940253 . - 0 ID=cds-WP_002910918.1;Parent=gene-NLI98_RS09285;Dbxref=Genbank:WP_002910918.1;Name=WP_002910918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1;locus_tag=NLI98_RS09285;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=WP_002910918.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1940310 1941281 . - . ID=gene-NLI98_RS09290;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=NLI98_RS09290;old_locus_tag=NLI98_09285 NZ_CP100601.1 Protein Homology CDS 1940310 1941281 . - 0 ID=cds-WP_002910917.1;Parent=gene-NLI98_RS09290;Dbxref=Genbank:WP_002910917.1;Name=WP_002910917.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227647.1;locus_tag=NLI98_RS09290;product=PTS mannose transporter subunit IIAB;protein_id=WP_002910917.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1941728 1943287 . + . ID=gene-NLI98_RS09295;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=NLI98_RS09295;old_locus_tag=NLI98_09290 NZ_CP100601.1 Protein Homology CDS 1941728 1943287 . + 0 ID=cds-WP_004145524.1;Parent=gene-NLI98_RS09295;Dbxref=Genbank:WP_004145524.1;Name=WP_004145524.1;gbkey=CDS;gene=yoaE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310552.1;locus_tag=NLI98_RS09295;product=CNNM family cation transport protein YoaE;protein_id=WP_004145524.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1943321 1944898 . - . ID=gene-NLI98_RS09300;Name=NLI98_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09300;old_locus_tag=NLI98_09295 NZ_CP100601.1 Protein Homology CDS 1943321 1944898 . - 0 ID=cds-WP_064159758.1;Parent=gene-NLI98_RS09300;Dbxref=Genbank:WP_064159758.1;Name=WP_064159758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227645.1;locus_tag=NLI98_RS09300;product=EAL domain-containing protein;protein_id=WP_064159758.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1945081 1946445 . - . ID=gene-NLI98_RS09305;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=NLI98_RS09305;old_locus_tag=NLI98_09300 NZ_CP100601.1 Protein Homology CDS 1945081 1946445 . - 0 ID=cds-WP_004151445.1;Parent=gene-NLI98_RS09305;Dbxref=Genbank:WP_004151445.1;Name=WP_004151445.1;gbkey=CDS;gene=sdaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227643.1;locus_tag=NLI98_RS09305;product=L-serine ammonia-lyase;protein_id=WP_004151445.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1946608 1947186 . - . ID=gene-NLI98_RS09310;Name=NLI98_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09310;old_locus_tag=NLI98_09305 NZ_CP100601.1 Protein Homology CDS 1946608 1947186 . - 0 ID=cds-WP_004180429.1;Parent=gene-NLI98_RS09310;Dbxref=Genbank:WP_004180429.1;Name=WP_004180429.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,CoA pyrophosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227642.1;locus_tag=NLI98_RS09310;product=CoA pyrophosphatase;protein_id=WP_004180429.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1947190 1948545 . - . ID=gene-NLI98_RS09315;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=NLI98_RS09315;old_locus_tag=NLI98_09310 NZ_CP100601.1 Protein Homology CDS 1947190 1948545 . - 0 ID=cds-WP_088498041.1;Parent=gene-NLI98_RS09315;Dbxref=Genbank:WP_088498041.1;Name=WP_088498041.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227641.1;locus_tag=NLI98_RS09315;product=aminodeoxychorismate synthase component 1;protein_id=WP_088498041.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1948634 1948819 . + . ID=gene-NLI98_RS09320;Name=NLI98_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09320;old_locus_tag=NLI98_09315 NZ_CP100601.1 Protein Homology CDS 1948634 1948819 . + 0 ID=cds-WP_004145519.1;Parent=gene-NLI98_RS09320;Dbxref=Genbank:WP_004145519.1;Name=WP_004145519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227640.1;locus_tag=NLI98_RS09320;product=YoaH family protein;protein_id=WP_004145519.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1948820 1949164 . - . ID=gene-NLI98_RS09325;Name=NLI98_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09325;old_locus_tag=NLI98_09320 NZ_CP100601.1 Protein Homology CDS 1948820 1949164 . - 0 ID=cds-WP_002910910.1;Parent=gene-NLI98_RS09325;Dbxref=Genbank:WP_002910910.1;Name=WP_002910910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227639.1;locus_tag=NLI98_RS09325;product=RidA family protein;protein_id=WP_002910910.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1949296 1951206 . + . ID=gene-NLI98_RS09330;Name=NLI98_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09330;old_locus_tag=NLI98_09325 NZ_CP100601.1 Protein Homology CDS 1949296 1951206 . + 0 ID=cds-WP_004175456.1;Parent=gene-NLI98_RS09330;Dbxref=Genbank:WP_004175456.1;Name=WP_004175456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227638.1;locus_tag=NLI98_RS09330;product=ATP-dependent DNA helicase;protein_id=WP_004175456.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1951352 1952047 . + . ID=gene-NLI98_RS09335;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=NLI98_RS09335;old_locus_tag=NLI98_09330 NZ_CP100601.1 Protein Homology CDS 1951352 1952047 . + 0 ID=cds-WP_004180426.1;Parent=gene-NLI98_RS09335;Dbxref=Genbank:WP_004180426.1;Name=WP_004180426.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227637.1;locus_tag=NLI98_RS09335;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_004180426.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1952086 1952667 . + . ID=gene-NLI98_RS09340;Name=NLI98_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09340;old_locus_tag=NLI98_09335 NZ_CP100601.1 Protein Homology CDS 1952086 1952667 . + 0 ID=cds-WP_002910905.1;Parent=gene-NLI98_RS09340;Dbxref=Genbank:WP_002910905.1;Name=WP_002910905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227636.1;locus_tag=NLI98_RS09340;product=Slp family lipoprotein;protein_id=WP_002910905.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1952873 1954558 . + . ID=gene-NLI98_RS09345;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=NLI98_RS09345;old_locus_tag=NLI98_09340 NZ_CP100601.1 Protein Homology CDS 1952873 1954558 . + 0 ID=cds-WP_002910904.1;Parent=gene-NLI98_RS09345;Dbxref=Genbank:WP_002910904.1;Name=WP_002910904.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122193.1;locus_tag=NLI98_RS09345;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_002910904.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1954640 1955755 . + . ID=gene-NLI98_RS09350;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=NLI98_RS09350;old_locus_tag=NLI98_09345 NZ_CP100601.1 Protein Homology CDS 1954640 1955755 . + 0 ID=cds-WP_004199382.1;Parent=gene-NLI98_RS09350;Dbxref=Genbank:WP_004199382.1;Name=WP_004199382.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227634.1;locus_tag=NLI98_RS09350;product=ribonuclease D;protein_id=WP_004199382.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1955833 1956102 . - . ID=gene-NLI98_RS09355;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=NLI98_RS09355;old_locus_tag=NLI98_09350 NZ_CP100601.1 Protein Homology CDS 1955833 1956102 . - 0 ID=cds-WP_002910902.1;Parent=gene-NLI98_RS09355;Dbxref=Genbank:WP_002910902.1;Name=WP_002910902.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227633.1;locus_tag=NLI98_RS09355;product=cell division topological specificity factor MinE;protein_id=WP_002910902.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1956106 1956918 . - . ID=gene-NLI98_RS09360;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=NLI98_RS09360;old_locus_tag=NLI98_09355 NZ_CP100601.1 Protein Homology CDS 1956106 1956918 . - 0 ID=cds-WP_002910900.1;Parent=gene-NLI98_RS09360;Dbxref=Genbank:WP_002910900.1;Name=WP_002910900.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=NLI98_RS09360;product=septum site-determining protein MinD;protein_id=WP_002910900.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1956942 1957640 . - . ID=gene-NLI98_RS09365;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=NLI98_RS09365;old_locus_tag=NLI98_09360 NZ_CP100601.1 Protein Homology CDS 1956942 1957640 . - 0 ID=cds-WP_004180423.1;Parent=gene-NLI98_RS09365;Dbxref=Genbank:WP_004180423.1;Name=WP_004180423.1;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227631.1;locus_tag=NLI98_RS09365;product=septum site-determining protein MinC;protein_id=WP_004180423.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1957767 1958048 . + . ID=gene-NLI98_RS09370;Name=NLI98_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09370;old_locus_tag=NLI98_09365 NZ_CP100601.1 Protein Homology CDS 1957767 1958048 . + 0 ID=cds-WP_002910898.1;Parent=gene-NLI98_RS09370;Dbxref=Genbank:WP_002910898.1;Name=WP_002910898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910898.1;locus_tag=NLI98_RS09370;product=YcgL domain-containing protein;protein_id=WP_002910898.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1958065 1958724 . + . ID=gene-NLI98_RS09375;Name=NLI98_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09375;old_locus_tag=NLI98_09370 NZ_CP100601.1 Protein Homology CDS 1958065 1958724 . + 0 ID=cds-WP_004189297.1;Parent=gene-NLI98_RS09375;Dbxref=Genbank:WP_004189297.1;Name=WP_004189297.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227628.1;locus_tag=NLI98_RS09375;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_004189297.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1958819 1959265 . + . ID=gene-NLI98_RS09380;Name=NLI98_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09380;old_locus_tag=NLI98_09375 NZ_CP100601.1 Protein Homology CDS 1958819 1959265 . + 0 ID=cds-WP_002910896.1;Parent=gene-NLI98_RS09380;Dbxref=Genbank:WP_002910896.1;Name=WP_002910896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227627.1;locus_tag=NLI98_RS09380;product=YcgN family cysteine cluster protein;protein_id=WP_002910896.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1959272 1959616 . - . ID=gene-NLI98_RS09385;Name=NLI98_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09385;old_locus_tag=NLI98_09380 NZ_CP100601.1 Protein Homology CDS 1959272 1959616 . - 0 ID=cds-WP_002910895.1;Parent=gene-NLI98_RS09385;Dbxref=Genbank:WP_002910895.1;Name=WP_002910895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227626.1;locus_tag=NLI98_RS09385;product=DUF1971 domain-containing protein;protein_id=WP_002910895.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1959767 1960297 . - . ID=gene-NLI98_RS09390;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=NLI98_RS09390;old_locus_tag=NLI98_09385 NZ_CP100601.1 Protein Homology CDS 1959767 1960297 . - 0 ID=cds-WP_002910894.1;Parent=gene-NLI98_RS09390;Dbxref=Genbank:WP_002910894.1;Name=WP_002910894.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227625.1;locus_tag=NLI98_RS09390;product=disulfide bond formation protein DsbB;protein_id=WP_002910894.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1960426 1961976 . - . ID=gene-NLI98_RS09395;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=NLI98_RS09395;old_locus_tag=NLI98_09390 NZ_CP100601.1 Protein Homology CDS 1960426 1961976 . - 0 ID=cds-WP_014343233.1;Parent=gene-NLI98_RS09395;Dbxref=Genbank:WP_014343233.1;Name=WP_014343233.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227624.1;locus_tag=NLI98_RS09395;product=sodium/proton antiporter NhaB;protein_id=WP_014343233.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1962013 1962144 . + . ID=gene-NLI98_RS09400;Name=NLI98_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09400 NZ_CP100601.1 Protein Homology CDS 1962013 1962144 . + 0 ID=cds-WP_004163532.1;Parent=gene-NLI98_RS09400;Dbxref=Genbank:WP_004163532.1;Name=WP_004163532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004163532.1;locus_tag=NLI98_RS09400;product=hypothetical protein;protein_id=WP_004163532.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1962225 1962944 . + . ID=gene-NLI98_RS09405;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=NLI98_RS09405;old_locus_tag=NLI98_09395 NZ_CP100601.1 Protein Homology CDS 1962225 1962944 . + 0 ID=cds-WP_002910890.1;Parent=gene-NLI98_RS09405;Dbxref=Genbank:WP_002910890.1;Name=WP_002910890.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227623.1;locus_tag=NLI98_RS09405;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_002910890.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1963019 1964551 . - . ID=gene-NLI98_RS09410;Name=NLI98_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09410;old_locus_tag=NLI98_09400 NZ_CP100601.1 Protein Homology CDS 1963019 1964551 . - 0 ID=cds-WP_002910889.1;Parent=gene-NLI98_RS09410;Dbxref=Genbank:WP_002910889.1;Name=WP_002910889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227622.1;locus_tag=NLI98_RS09410;product=SpoVR family protein;protein_id=WP_002910889.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1964628 1964774 . + . ID=gene-NLI98_RS09415;Name=NLI98_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09415;old_locus_tag=NLI98_09405 NZ_CP100601.1 Protein Homology CDS 1964628 1964774 . + 0 ID=cds-WP_004145506.1;Parent=gene-NLI98_RS09415;Dbxref=Genbank:WP_004145506.1;Name=WP_004145506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227621.1;locus_tag=NLI98_RS09415;product=hypothetical protein;protein_id=WP_004145506.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1964873 1966171 . + . ID=gene-NLI98_RS09420;Name=NLI98_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09420;old_locus_tag=NLI98_09410 NZ_CP100601.1 Protein Homology CDS 1964873 1966171 . + 0 ID=cds-WP_004175465.1;Parent=gene-NLI98_RS09420;Dbxref=Genbank:WP_004175465.1;Name=WP_004175465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309711.1;locus_tag=NLI98_RS09420;product=D-amino acid dehydrogenase;protein_id=WP_004175465.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1966181 1967251 . + . ID=gene-NLI98_RS09425;Name=dadX;gbkey=Gene;gene=dadX;gene_biotype=protein_coding;locus_tag=NLI98_RS09425;old_locus_tag=NLI98_09415 NZ_CP100601.1 Protein Homology CDS 1966181 1967251 . + 0 ID=cds-WP_002910887.1;Parent=gene-NLI98_RS09425;Dbxref=Genbank:WP_002910887.1;Name=WP_002910887.1;Ontology_term=GO:0006522,GO:0008784;gbkey=CDS;gene=dadX;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227619.1;locus_tag=NLI98_RS09425;product=catabolic alanine racemase DadX;protein_id=WP_002910887.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1967268 1969001 . - . ID=gene-NLI98_RS09430;Name=NLI98_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09430;old_locus_tag=NLI98_09420 NZ_CP100601.1 Protein Homology CDS 1967268 1969001 . - 0 ID=cds-WP_002910885.1;Parent=gene-NLI98_RS09430;Dbxref=Genbank:WP_002910885.1;Name=WP_002910885.1;Ontology_term=GO:0006813,GO:0006884,GO:0055085,GO:0005451,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monovalent cation:proton antiporter activity|0005451||IEA;go_process=potassium ion transport|0006813||IEA,cell volume homeostasis|0006884||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227618.1;locus_tag=NLI98_RS09430;product=potassium/proton antiporter;protein_id=WP_002910885.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1969094 1970008 . - . ID=gene-NLI98_RS09435;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=NLI98_RS09435;old_locus_tag=NLI98_09425 NZ_CP100601.1 Protein Homology CDS 1969094 1970008 . - 0 ID=cds-WP_002910883.1;Parent=gene-NLI98_RS09435;Dbxref=Genbank:WP_002910883.1;Name=WP_002910883.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541280.1;locus_tag=NLI98_RS09435;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_002910883.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1970184 1970795 . + . ID=gene-NLI98_RS09440;Name=emtA;gbkey=Gene;gene=emtA;gene_biotype=protein_coding;locus_tag=NLI98_RS09440;old_locus_tag=NLI98_09430 NZ_CP100601.1 Protein Homology CDS 1970184 1970795 . + 0 ID=cds-WP_002910846.1;Parent=gene-NLI98_RS09440;Dbxref=Genbank:WP_002910846.1;Name=WP_002910846.1;gbkey=CDS;gene=emtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227615.1;locus_tag=NLI98_RS09440;product=membrane-bound lytic murein transglycosylase EmtA;protein_id=WP_002910846.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1970837 1972957 . - . ID=gene-NLI98_RS09445;Name=NLI98_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09445;old_locus_tag=NLI98_09435 NZ_CP100601.1 Protein Homology CDS 1970837 1972957 . - 0 ID=cds-WP_088498042.1;Parent=gene-NLI98_RS09445;Dbxref=Genbank:WP_088498042.1;Name=WP_088498042.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227614.1;locus_tag=NLI98_RS09445;product=TonB-dependent siderophore receptor;protein_id=WP_088498042.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1973210 1974955 . - . ID=gene-NLI98_RS09450;Name=NLI98_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09450;old_locus_tag=NLI98_09440 NZ_CP100601.1 Protein Homology CDS 1973210 1974955 . - 0 ID=cds-WP_039819486.1;Parent=gene-NLI98_RS09450;Dbxref=Genbank:WP_039819486.1;Name=WP_039819486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227613.1;locus_tag=NLI98_RS09450;product=alpha%2Calpha-trehalase;protein_id=WP_039819486.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1975140 1975268 . + . ID=gene-NLI98_RS09455;Name=NLI98_RS09455;end_range=1975268,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS09455;old_locus_tag=NLI98_09445;partial=true;pseudo=true NZ_CP100601.1 Protein Homology CDS 1975140 1975268 . + 0 ID=cds-NLI98_RS09455;Parent=gene-NLI98_RS09455;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1975268,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151441.1;locus_tag=NLI98_RS09455;partial=true;product=biopolymer transporter TonB;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 1975340 1976779 . + . ID=gene-NLI98_RS09460;Name=NLI98_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09460;old_locus_tag=NLI98_09450 NZ_CP100601.1 Protein Homology CDS 1975340 1976779 . + 0 ID=cds-WP_004211064.1;Parent=gene-NLI98_RS09460;Dbxref=Genbank:WP_004211064.1;Name=WP_004211064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227612.1;locus_tag=NLI98_RS09460;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_004211064.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1976773 1977702 . + . ID=gene-NLI98_RS09465;Name=NLI98_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09465;old_locus_tag=NLI98_09455 NZ_CP100601.1 Protein Homology CDS 1976773 1977702 . + 0 ID=cds-WP_002910835.1;Parent=gene-NLI98_RS09465;Dbxref=Genbank:WP_002910835.1;Name=WP_002910835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227611.1;locus_tag=NLI98_RS09465;product=alpha-E domain-containing protein;protein_id=WP_002910835.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1977699 1978514 . + . ID=gene-NLI98_RS09470;Name=NLI98_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09470;old_locus_tag=NLI98_09460 NZ_CP100601.1 Protein Homology CDS 1977699 1978514 . + 0 ID=cds-WP_004184645.1;Parent=gene-NLI98_RS09470;Dbxref=Genbank:WP_004184645.1;Name=WP_004184645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227610.1;locus_tag=NLI98_RS09470;product=transglutaminase family protein;protein_id=WP_004184645.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1978531 1979277 . + . ID=gene-NLI98_RS09475;Name=NLI98_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09475;old_locus_tag=NLI98_09465 NZ_CP100601.1 Protein Homology CDS 1978531 1979277 . + 0 ID=cds-WP_002910830.1;Parent=gene-NLI98_RS09475;Dbxref=Genbank:WP_002910830.1;Name=WP_002910830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227609.1;locus_tag=NLI98_RS09475;product=proteasome-type protease;protein_id=WP_002910830.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1979716 1980702 . + . ID=gene-NLI98_RS09480;Name=NLI98_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09480;old_locus_tag=NLI98_09470 NZ_CP100601.1 Protein Homology CDS 1979716 1980702 . + 0 ID=cds-WP_167876970.1;Parent=gene-NLI98_RS09480;Dbxref=Genbank:WP_167876970.1;Name=WP_167876970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227607.1;locus_tag=NLI98_RS09480;product=fatty acid desaturase;protein_id=WP_167876970.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1980695 1981495 . + . ID=gene-NLI98_RS09485;Name=NLI98_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09485;old_locus_tag=NLI98_09475 NZ_CP100601.1 Protein Homology CDS 1980695 1981495 . + 0 ID=cds-WP_264452237.1;Parent=gene-NLI98_RS09485;Dbxref=Genbank:WP_264452237.1;Name=WP_264452237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227606.1;locus_tag=NLI98_RS09485;product=PhnD/SsuA/transferrin family substrate-binding protein;protein_id=WP_264452237.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1981533 1981655 . - . ID=gene-NLI98_RS09490;Name=NLI98_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09490;old_locus_tag=NLI98_09480 NZ_CP100601.1 Protein Homology CDS 1981533 1981655 . - 0 ID=cds-WP_004145488.1;Parent=gene-NLI98_RS09490;Dbxref=Genbank:WP_004145488.1;Name=WP_004145488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227605.1;locus_tag=NLI98_RS09490;product=nitrilotriacetate monooxygenase;protein_id=WP_004145488.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1981953 1982096 . - . ID=gene-NLI98_RS09495;Name=NLI98_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09495;old_locus_tag=NLI98_09485 NZ_CP100601.1 Protein Homology CDS 1981953 1982096 . - 0 ID=cds-WP_004219597.1;Parent=gene-NLI98_RS09495;Dbxref=Genbank:WP_004219597.1;Name=WP_004219597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227604.1;locus_tag=NLI98_RS09495;product=hypothetical protein;protein_id=WP_004219597.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1982273 1983214 . + . ID=gene-NLI98_RS09500;Name=tdcA;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=NLI98_RS09500;old_locus_tag=NLI98_09490 NZ_CP100601.1 Protein Homology CDS 1982273 1983214 . + 0 ID=cds-WP_002910764.1;Parent=gene-NLI98_RS09500;Dbxref=Genbank:WP_002910764.1;Name=WP_002910764.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=tdcA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227603.1;locus_tag=NLI98_RS09500;product=transcriptional regulator TdcA;protein_id=WP_002910764.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1983308 1984297 . + . ID=gene-NLI98_RS09505;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=NLI98_RS09505;old_locus_tag=NLI98_09495 NZ_CP100601.1 Protein Homology CDS 1983308 1984297 . + 0 ID=cds-WP_002910762.1;Parent=gene-NLI98_RS09505;Dbxref=Genbank:WP_002910762.1;Name=WP_002910762.1;Ontology_term=GO:0006567,GO:0004794,GO:0030170;gbkey=CDS;gene=tdcB;go_function=L-threonine ammonia-lyase activity|0004794||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227602.1;locus_tag=NLI98_RS09505;product=bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;protein_id=WP_002910762.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1984323 1985654 . + . ID=gene-NLI98_RS09510;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=NLI98_RS09510;old_locus_tag=NLI98_09500 NZ_CP100601.1 Protein Homology CDS 1984323 1985654 . + 0 ID=cds-WP_004145486.1;Parent=gene-NLI98_RS09510;Dbxref=Genbank:WP_004145486.1;Name=WP_004145486.1;gbkey=CDS;gene=tdcC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227601.1;locus_tag=NLI98_RS09510;product=threonine/serine transporter TdcC;protein_id=WP_004145486.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1985682 1986890 . + . ID=gene-NLI98_RS09515;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=NLI98_RS09515;old_locus_tag=NLI98_09505 NZ_CP100601.1 Protein Homology CDS 1985682 1986890 . + 0 ID=cds-WP_004175486.1;Parent=gene-NLI98_RS09515;Dbxref=Genbank:WP_004175486.1;Name=WP_004175486.1;Ontology_term=GO:0006082,GO:0016310,GO:0016301;gbkey=CDS;gene=tdcD;go_function=kinase activity|0016301||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227600.1;locus_tag=NLI98_RS09515;product=propionate kinase;protein_id=WP_004175486.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1986919 1989213 . + . ID=gene-NLI98_RS09520;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=NLI98_RS09520;old_locus_tag=NLI98_09510 NZ_CP100601.1 Protein Homology CDS 1986919 1989213 . + 0 ID=cds-WP_088498055.1;Parent=gene-NLI98_RS09520;Dbxref=Genbank:WP_088498055.1;Name=WP_088498055.1;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312021.1;locus_tag=NLI98_RS09520;product=formate C-acetyltransferase;protein_id=WP_088498055.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1989264 1989410 . - . ID=gene-NLI98_RS09525;Name=NLI98_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09525;old_locus_tag=NLI98_09515 NZ_CP100601.1 Protein Homology CDS 1989264 1989410 . - 0 ID=cds-WP_014343220.1;Parent=gene-NLI98_RS09525;Dbxref=Genbank:WP_014343220.1;Name=WP_014343220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227597.1;locus_tag=NLI98_RS09525;product=hypothetical protein;protein_id=WP_014343220.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1989700 1990758 . + . ID=gene-NLI98_RS09530;Name=NLI98_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09530;old_locus_tag=NLI98_09520 NZ_CP100601.1 Protein Homology CDS 1989700 1990758 . + 0 ID=cds-WP_004189329.1;Parent=gene-NLI98_RS09530;Dbxref=Genbank:WP_004189329.1;Name=WP_004189329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227596.1;locus_tag=NLI98_RS09530;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_004189329.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1990868 1991782 . + . ID=gene-NLI98_RS09535;Name=NLI98_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09535;old_locus_tag=NLI98_09525 NZ_CP100601.1 Protein Homology CDS 1990868 1991782 . + 0 ID=cds-WP_004175489.1;Parent=gene-NLI98_RS09535;Dbxref=Genbank:WP_004175489.1;Name=WP_004175489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227595.1;locus_tag=NLI98_RS09535;product=branched-chain amino acid ABC transporter permease;protein_id=WP_004175489.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1991792 1993078 . + . ID=gene-NLI98_RS09540;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=NLI98_RS09540;old_locus_tag=NLI98_09530 NZ_CP100601.1 Protein Homology CDS 1991792 1993078 . + 0 ID=cds-WP_004148804.1;Parent=gene-NLI98_RS09540;Dbxref=Genbank:WP_004148804.1;Name=WP_004148804.1;Ontology_term=GO:0055085,GO:0015658,GO:0016020;gbkey=CDS;gene=livM;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910725.1;locus_tag=NLI98_RS09540;product=high-affinity branched-chain amino acid ABC transporter permease LivM;protein_id=WP_004148804.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1993075 1993950 . + . ID=gene-NLI98_RS09545;Name=NLI98_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09545;old_locus_tag=NLI98_09535 NZ_CP100601.1 Protein Homology CDS 1993075 1993950 . + 0 ID=cds-WP_016946446.1;Parent=gene-NLI98_RS09545;Dbxref=Genbank:WP_016946446.1;Name=WP_016946446.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227592.1;locus_tag=NLI98_RS09545;product=ATP-binding cassette domain-containing protein;protein_id=WP_016946446.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 1993947 1994656 . + . ID=gene-NLI98_RS09550;Name=NLI98_RS09550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS09550;old_locus_tag=NLI98_09540;pseudo=true NZ_CP100601.1 Protein Homology CDS 1993947 1994656 . + 0 ID=cds-NLI98_RS09550;Parent=gene-NLI98_RS09550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227591.1;locus_tag=NLI98_RS09550;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 1994662 1995555 . - . ID=gene-NLI98_RS09555;Name=NLI98_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09555;old_locus_tag=NLI98_09545 NZ_CP100601.1 Protein Homology CDS 1994662 1995555 . - 0 ID=cds-WP_002910720.1;Parent=gene-NLI98_RS09555;Dbxref=Genbank:WP_002910720.1;Name=WP_002910720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227590.1;locus_tag=NLI98_RS09555;product=LysR substrate-binding domain-containing protein;protein_id=WP_002910720.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1995839 1997482 . + . ID=gene-NLI98_RS09560;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=NLI98_RS09560;old_locus_tag=NLI98_09550 NZ_CP100601.1 Protein Homology CDS 1995839 1997482 . + 0 ID=cds-WP_004180410.1;Parent=gene-NLI98_RS09560;Dbxref=Genbank:WP_004180410.1;Name=WP_004180410.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227589.1;locus_tag=NLI98_RS09560;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_004180410.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1997532 1998008 . - . ID=gene-NLI98_RS09565;Name=NLI98_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09565;old_locus_tag=NLI98_09555 NZ_CP100601.1 Protein Homology CDS 1997532 1998008 . - 0 ID=cds-WP_002910717.1;Parent=gene-NLI98_RS09565;Dbxref=Genbank:WP_002910717.1;Name=WP_002910717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227588.1;locus_tag=NLI98_RS09565;product=GNAT family N-acetyltransferase;protein_id=WP_002910717.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1998107 1999033 . + . ID=gene-NLI98_RS09570;Name=NLI98_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09570;old_locus_tag=NLI98_09560 NZ_CP100601.1 Protein Homology CDS 1998107 1999033 . + 0 ID=cds-WP_002910715.1;Parent=gene-NLI98_RS09570;Dbxref=Genbank:WP_002910715.1;Name=WP_002910715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227587.1;locus_tag=NLI98_RS09570;product=LysR family transcriptional regulator;protein_id=WP_002910715.1;transl_table=11 NZ_CP100601.1 RefSeq gene 1999337 2000632 . + . ID=gene-NLI98_RS09575;Name=NLI98_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09575;old_locus_tag=NLI98_09565 NZ_CP100601.1 Protein Homology CDS 1999337 2000632 . + 0 ID=cds-WP_088498046.1;Parent=gene-NLI98_RS09575;Dbxref=Genbank:WP_088498046.1;Name=WP_088498046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935508.1;locus_tag=NLI98_RS09575;product=MFS transporter;protein_id=WP_088498046.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2000644 2001453 . + . ID=gene-NLI98_RS09580;Name=NLI98_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09580;old_locus_tag=NLI98_09570 NZ_CP100601.1 Protein Homology CDS 2000644 2001453 . + 0 ID=cds-WP_004899032.1;Parent=gene-NLI98_RS09580;Dbxref=Genbank:WP_004899032.1;Name=WP_004899032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227584.1;locus_tag=NLI98_RS09580;product=substrate-binding domain-containing protein;protein_id=WP_004899032.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2001428 2002327 . - . ID=gene-NLI98_RS09585;Name=NLI98_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09585;old_locus_tag=NLI98_09575 NZ_CP100601.1 Protein Homology CDS 2001428 2002327 . - 0 ID=cds-WP_004152315.1;Parent=gene-NLI98_RS09585;Dbxref=Genbank:WP_004152315.1;Name=WP_004152315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227583.1;locus_tag=NLI98_RS09585;product=LysR family transcriptional regulator;protein_id=WP_004152315.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2002437 2002919 . - . ID=gene-NLI98_RS09590;Name=NLI98_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09590;old_locus_tag=NLI98_09580 NZ_CP100601.1 Protein Homology CDS 2002437 2002919 . - 0 ID=cds-WP_002910657.1;Parent=gene-NLI98_RS09590;Dbxref=Genbank:WP_002910657.1;Name=WP_002910657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227582.1;locus_tag=NLI98_RS09590;product=cold shock domain-containing protein;protein_id=WP_002910657.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2003110 2003808 . + . ID=gene-NLI98_RS09595;Name=NLI98_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09595;old_locus_tag=NLI98_09585 NZ_CP100601.1 Protein Homology CDS 2003110 2003808 . + 0 ID=cds-WP_088498047.1;Parent=gene-NLI98_RS09595;Dbxref=Genbank:WP_088498047.1;Name=WP_088498047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004899029.1;locus_tag=NLI98_RS09595;product=RluA family pseudouridine synthase;protein_id=WP_088498047.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2003834 2004373 . - . ID=gene-NLI98_RS09600;Name=NLI98_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09600;old_locus_tag=NLI98_09590 NZ_CP100601.1 Protein Homology CDS 2003834 2004373 . - 0 ID=cds-WP_002910652.1;Parent=gene-NLI98_RS09600;Dbxref=Genbank:WP_002910652.1;Name=WP_002910652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227580.1;locus_tag=NLI98_RS09600;product=DUF2058 domain-containing protein;protein_id=WP_002910652.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2004488 2004817 . - . ID=gene-NLI98_RS09605;Name=NLI98_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09605;old_locus_tag=NLI98_09595 NZ_CP100601.1 Protein Homology CDS 2004488 2004817 . - 0 ID=cds-WP_002910650.1;Parent=gene-NLI98_RS09605;Dbxref=Genbank:WP_002910650.1;Name=WP_002910650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227579.1;locus_tag=NLI98_RS09605;product=gamma-glutamylcyclotransferase;protein_id=WP_002910650.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2005384 2006724 . + . ID=gene-NLI98_RS09610;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=NLI98_RS09610;old_locus_tag=NLI98_09600 NZ_CP100601.1 Protein Homology CDS 2005384 2006724 . + 0 ID=cds-WP_088498049.1;Parent=gene-NLI98_RS09610;Dbxref=Genbank:WP_088498049.1;Name=WP_088498049.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227577.1;locus_tag=NLI98_RS09610;product=type VI secretion system baseplate subunit TssK;protein_id=WP_088498049.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2006721 2007374 . + . ID=gene-NLI98_RS09615;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=NLI98_RS09615;old_locus_tag=NLI98_09605 NZ_CP100601.1 Protein Homology CDS 2006721 2007374 . + 0 ID=cds-WP_088498050.1;Parent=gene-NLI98_RS09615;Dbxref=Genbank:WP_088498050.1;Name=WP_088498050.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227576.1;locus_tag=NLI98_RS09615;product=type VI secretion system protein TssL%2C short form;protein_id=WP_088498050.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2007378 2009075 . + . ID=gene-NLI98_RS09620;Name=NLI98_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09620;old_locus_tag=NLI98_09610 NZ_CP100601.1 Protein Homology CDS 2007378 2009075 . + 0 ID=cds-WP_088498051.1;Parent=gene-NLI98_RS09620;Dbxref=Genbank:WP_088498051.1;Name=WP_088498051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227575.1;locus_tag=NLI98_RS09620;product=OmpA family protein;protein_id=WP_088498051.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2009259 2009383 . + . ID=gene-NLI98_RS09625;Name=NLI98_RS09625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS09625;old_locus_tag=NLI98_09615;pseudo=true NZ_CP100601.1 Protein Homology CDS 2009259 2009383 . + 0 ID=cds-NLI98_RS09625;Parent=gene-NLI98_RS09625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227574.1;locus_tag=NLI98_RS09625;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2009534 2012233 . + . ID=gene-NLI98_RS09630;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=NLI98_RS09630;old_locus_tag=NLI98_09620 NZ_CP100601.1 Protein Homology CDS 2009534 2012233 . + 0 ID=cds-WP_088498052.1;Parent=gene-NLI98_RS09630;Dbxref=Genbank:WP_088498052.1;Name=WP_088498052.1;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017879836.1;locus_tag=NLI98_RS09630;product=type VI secretion system tip protein VgrG;protein_id=WP_088498052.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2012284 2014107 . + . ID=gene-NLI98_RS09635;Name=NLI98_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09635;old_locus_tag=NLI98_09625 NZ_CP100601.1 Protein Homology CDS 2012284 2014107 . + 0 ID=cds-WP_225733959.1;Parent=gene-NLI98_RS09635;Dbxref=Genbank:WP_225733959.1;Name=WP_225733959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463314.1;locus_tag=NLI98_RS09635;product=phospholipase;protein_id=WP_225733959.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2014185 2015381 . + . ID=gene-NLI98_RS09640;Name=NLI98_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09640;old_locus_tag=NLI98_09630 NZ_CP100601.1 Protein Homology CDS 2014185 2015381 . + 0 ID=cds-WP_225733954.1;Parent=gene-NLI98_RS09640;Dbxref=Genbank:WP_225733954.1;Name=WP_225733954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463311.1;locus_tag=NLI98_RS09640;product=DUF6396 domain-containing protein;protein_id=WP_225733954.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2015419 2016486 . + . ID=gene-NLI98_RS09645;Name=NLI98_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09645;old_locus_tag=NLI98_09635 NZ_CP100601.1 Protein Homology CDS 2015419 2016486 . + 0 ID=cds-WP_075395033.1;Parent=gene-NLI98_RS09645;Dbxref=Genbank:WP_075395033.1;Name=WP_075395033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017879838.1;locus_tag=NLI98_RS09645;product=DUF6396 domain-containing protein;protein_id=WP_075395033.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2016655 2018526 . + . ID=gene-NLI98_RS09650;Name=NLI98_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09650;old_locus_tag=NLI98_09640 NZ_CP100601.1 Protein Homology CDS 2016655 2018526 . + 0 ID=cds-WP_049110358.1;Parent=gene-NLI98_RS09650;Dbxref=Genbank:WP_049110358.1;Name=WP_049110358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017879839.1;locus_tag=NLI98_RS09650;product=phospholipase;protein_id=WP_049110358.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2018601 2019797 . + . ID=gene-NLI98_RS09655;Name=NLI98_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09655;old_locus_tag=NLI98_09645 NZ_CP100601.1 Protein Homology CDS 2018601 2019797 . + 0 ID=cds-WP_225733953.1;Parent=gene-NLI98_RS09655;Dbxref=Genbank:WP_225733953.1;Name=WP_225733953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463311.1;locus_tag=NLI98_RS09655;product=DUF6396 domain-containing protein;protein_id=WP_225733953.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2019835 2021067 . + . ID=gene-NLI98_RS09660;Name=NLI98_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09660;old_locus_tag=NLI98_09650 NZ_CP100601.1 Protein Homology CDS 2019835 2021067 . + 0 ID=cds-WP_102024137.1;Parent=gene-NLI98_RS09660;Dbxref=Genbank:WP_102024137.1;Name=WP_102024137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463311.1;locus_tag=NLI98_RS09660;product=sel1 repeat family protein;protein_id=WP_102024137.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2021175 2022152 . + . ID=gene-NLI98_RS09665;Name=NLI98_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09665;old_locus_tag=NLI98_09655 NZ_CP100601.1 Protein Homology CDS 2021175 2022152 . + 0 ID=cds-WP_088498056.1;Parent=gene-NLI98_RS09665;Dbxref=Genbank:WP_088498056.1;Name=WP_088498056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016532069.1;locus_tag=NLI98_RS09665;product=hypothetical protein;protein_id=WP_088498056.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2022242 2022505 . + . ID=gene-NLI98_RS09670;Name=NLI98_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09670;old_locus_tag=NLI98_09660 NZ_CP100601.1 Protein Homology CDS 2022242 2022505 . + 0 ID=cds-WP_016532068.1;Parent=gene-NLI98_RS09670;Dbxref=Genbank:WP_016532068.1;Name=WP_016532068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004216433.1;locus_tag=NLI98_RS09670;product=PAAR domain-containing protein;protein_id=WP_016532068.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2022508 2023770 . + . ID=gene-NLI98_RS09675;Name=NLI98_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09675;old_locus_tag=NLI98_09665 NZ_CP100601.1 Protein Homology CDS 2022508 2023770 . + 0 ID=cds-WP_226325914.1;Parent=gene-NLI98_RS09675;Dbxref=Genbank:WP_226325914.1;Name=WP_226325914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463307.1;locus_tag=NLI98_RS09675;product=hypothetical protein;protein_id=WP_226325914.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2023876 2027271 . + . ID=gene-NLI98_RS09680;Name=NLI98_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09680;old_locus_tag=NLI98_09670 NZ_CP100601.1 Protein Homology CDS 2023876 2027271 . + 0 ID=cds-WP_088498057.1;Parent=gene-NLI98_RS09680;Dbxref=Genbank:WP_088498057.1;Name=WP_088498057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017879840.1;locus_tag=NLI98_RS09680;product=type VI secretion protein VasK;protein_id=WP_088498057.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2027405 2029168 . + . ID=gene-NLI98_RS09685;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=NLI98_RS09685;old_locus_tag=NLI98_09675 NZ_CP100601.1 Protein Homology CDS 2027405 2029168 . + 0 ID=cds-WP_040245431.1;Parent=gene-NLI98_RS09685;Dbxref=Genbank:WP_040245431.1;Name=WP_040245431.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227549.1;locus_tag=NLI98_RS09685;product=type VI secretion system baseplate subunit TssF;protein_id=WP_040245431.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2029198 2030214 . + . ID=gene-NLI98_RS09690;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=NLI98_RS09690;old_locus_tag=NLI98_09680 NZ_CP100601.1 Protein Homology CDS 2029198 2030214 . + 0 ID=cds-WP_074193537.1;Parent=gene-NLI98_RS09690;Dbxref=Genbank:WP_074193537.1;Name=WP_074193537.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227548.1;locus_tag=NLI98_RS09690;product=type VI secretion system baseplate subunit TssG;protein_id=WP_074193537.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2030195 2030731 . + . ID=gene-NLI98_RS09695;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=NLI98_RS09695;old_locus_tag=NLI98_09685 NZ_CP100601.1 Protein Homology CDS 2030195 2030731 . + 0 ID=cds-WP_004175532.1;Parent=gene-NLI98_RS09695;Dbxref=Genbank:WP_004175532.1;Name=WP_004175532.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020806091.1;locus_tag=NLI98_RS09695;product=type VI secretion system lipoprotein TssJ;protein_id=WP_004175532.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2030734 2031177 . + . ID=gene-NLI98_RS09700;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=NLI98_RS09700;old_locus_tag=NLI98_09690 NZ_CP100601.1 Protein Homology CDS 2030734 2031177 . + 0 ID=cds-WP_064278893.1;Parent=gene-NLI98_RS09700;Dbxref=Genbank:WP_064278893.1;Name=WP_064278893.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssE;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227546.1;locus_tag=NLI98_RS09700;product=type VI secretion system baseplate subunit TssE;protein_id=WP_064278893.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2031197 2032612 . + . ID=gene-NLI98_RS09705;Name=NLI98_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09705;old_locus_tag=NLI98_09695 NZ_CP100601.1 Protein Homology CDS 2031197 2032612 . + 0 ID=cds-WP_040148348.1;Parent=gene-NLI98_RS09705;Dbxref=Genbank:WP_040148348.1;Name=WP_040148348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227545.1;locus_tag=NLI98_RS09705;product=type VI secretion system ImpA family N-terminal domain-containing protein;protein_id=WP_040148348.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2032744 2033658 . + . ID=gene-NLI98_RS09710;Name=NLI98_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09710;old_locus_tag=NLI98_09700 NZ_CP100601.1 Protein Homology CDS 2032744 2033658 . + 0 ID=cds-WP_002910453.1;Parent=gene-NLI98_RS09710;Dbxref=Genbank:WP_002910453.1;Name=WP_002910453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227544.1;locus_tag=NLI98_RS09710;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002910453.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2033742 2034071 . + . ID=gene-NLI98_RS09715;Name=NLI98_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09715;old_locus_tag=NLI98_09705 NZ_CP100601.1 Protein Homology CDS 2033742 2034071 . + 0 ID=cds-WP_004145442.1;Parent=gene-NLI98_RS09715;Dbxref=Genbank:WP_004145442.1;Name=WP_004145442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227543.1;locus_tag=NLI98_RS09715;product=DUF1869 domain-containing protein;protein_id=WP_004145442.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2034152 2035243 . - . ID=gene-NLI98_RS09720;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=NLI98_RS09720;old_locus_tag=NLI98_09710 NZ_CP100601.1 Protein Homology CDS 2034152 2035243 . - 0 ID=cds-WP_002910443.1;Parent=gene-NLI98_RS09720;Dbxref=Genbank:WP_002910443.1;Name=WP_002910443.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=NLI98_RS09720;product=redox-regulated ATPase YchF;protein_id=WP_002910443.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2035361 2035945 . - . ID=gene-NLI98_RS09725;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=NLI98_RS09725;old_locus_tag=NLI98_09715 NZ_CP100601.1 Protein Homology CDS 2035361 2035945 . - 0 ID=cds-WP_004180389.1;Parent=gene-NLI98_RS09725;Dbxref=Genbank:WP_004180389.1;Name=WP_004180389.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910438.1;locus_tag=NLI98_RS09725;product=aminoacyl-tRNA hydrolase;protein_id=WP_004180389.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2036218 2036493 . + . ID=gene-NLI98_RS09730;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=NLI98_RS09730;old_locus_tag=NLI98_09720 NZ_CP100601.1 Protein Homology CDS 2036218 2036493 . + 0 ID=cds-WP_002910437.1;Parent=gene-NLI98_RS09730;Dbxref=Genbank:WP_002910437.1;Name=WP_002910437.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227540.1;locus_tag=NLI98_RS09730;product=stress-induced protein YchH;protein_id=WP_002910437.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2036716 2037762 . + . ID=gene-NLI98_RS09735;Name=NLI98_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09735;old_locus_tag=NLI98_09725 NZ_CP100601.1 Protein Homology CDS 2036716 2037762 . + 0 ID=cds-WP_004175547.1;Parent=gene-NLI98_RS09735;Dbxref=Genbank:WP_004175547.1;Name=WP_004175547.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227539.1;locus_tag=NLI98_RS09735;product=MerR family transcriptional regulator;protein_id=WP_004175547.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2037763 2039442 . - . ID=gene-NLI98_RS09740;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=NLI98_RS09740;old_locus_tag=NLI98_09730 NZ_CP100601.1 Protein Homology CDS 2037763 2039442 . - 0 ID=cds-WP_004189412.1;Parent=gene-NLI98_RS09740;Dbxref=Genbank:WP_004189412.1;Name=WP_004189412.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227538.1;locus_tag=NLI98_RS09740;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_004189412.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2039567 2040514 . - . ID=gene-NLI98_RS09745;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=NLI98_RS09745;old_locus_tag=NLI98_09735 NZ_CP100601.1 Protein Homology CDS 2039567 2040514 . - 0 ID=cds-WP_002910407.1;Parent=gene-NLI98_RS09745;Dbxref=Genbank:WP_002910407.1;Name=WP_002910407.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=NLI98_RS09745;product=ribose-phosphate diphosphokinase;protein_id=WP_002910407.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2040698 2041546 . - . ID=gene-NLI98_RS09750;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=NLI98_RS09750;old_locus_tag=NLI98_09740 NZ_CP100601.1 Protein Homology CDS 2040698 2041546 . - 0 ID=cds-WP_074193538.1;Parent=gene-NLI98_RS09750;Dbxref=Genbank:WP_074193538.1;Name=WP_074193538.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227536.1;locus_tag=NLI98_RS09750;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_074193538.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2041546 2042157 . - . ID=gene-NLI98_RS09755;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=NLI98_RS09755;old_locus_tag=NLI98_09745 NZ_CP100601.1 Protein Homology CDS 2041546 2042157 . - 0 ID=cds-WP_002910405.1;Parent=gene-NLI98_RS09755;Dbxref=Genbank:WP_002910405.1;Name=WP_002910405.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227535.1;locus_tag=NLI98_RS09755;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_002910405.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2042428 2043684 . + . ID=gene-NLI98_RS09760;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=NLI98_RS09760;old_locus_tag=NLI98_09750 NZ_CP100601.1 Protein Homology CDS 2042428 2043684 . + 0 ID=cds-WP_002910404.1;Parent=gene-NLI98_RS09760;Dbxref=Genbank:WP_002910404.1;Name=WP_002910404.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689438.1;locus_tag=NLI98_RS09760;product=glutamyl-tRNA reductase;protein_id=WP_002910404.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2043727 2044809 . + . ID=gene-NLI98_RS09765;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=NLI98_RS09765;old_locus_tag=NLI98_09755 NZ_CP100601.1 Protein Homology CDS 2043727 2044809 . + 0 ID=cds-WP_002910403.1;Parent=gene-NLI98_RS09765;Dbxref=Genbank:WP_002910403.1;Name=WP_002910403.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012132158.1;locus_tag=NLI98_RS09765;product=peptide chain release factor 1;protein_id=WP_002910403.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2044809 2045657 . + . ID=gene-NLI98_RS09770;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=NLI98_RS09770;old_locus_tag=NLI98_09760 NZ_CP100601.1 Protein Homology CDS 2044809 2045657 . + 0 ID=cds-WP_040224409.1;Parent=gene-NLI98_RS09770;Dbxref=Genbank:WP_040224409.1;Name=WP_040224409.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227532.1;locus_tag=NLI98_RS09770;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_040224409.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2045657 2046049 . + . ID=gene-NLI98_RS09775;Name=sirB2;gbkey=Gene;gene=sirB2;gene_biotype=protein_coding;locus_tag=NLI98_RS09775;old_locus_tag=NLI98_09765 NZ_CP100601.1 Protein Homology CDS 2045657 2046049 . + 0 ID=cds-WP_064167307.1;Parent=gene-NLI98_RS09775;Dbxref=Genbank:WP_064167307.1;Name=WP_064167307.1;gbkey=CDS;gene=sirB2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227531.1;locus_tag=NLI98_RS09775;product=invasion regulator SirB2;protein_id=WP_064167307.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2046053 2046865 . + . ID=gene-NLI98_RS09780;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=NLI98_RS09780;old_locus_tag=NLI98_09770 NZ_CP100601.1 Protein Homology CDS 2046053 2046865 . + 0 ID=cds-WP_002910395.1;Parent=gene-NLI98_RS09780;Dbxref=Genbank:WP_002910395.1;Name=WP_002910395.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227530.1;locus_tag=NLI98_RS09780;product=invasion regulator SirB1;protein_id=WP_002910395.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2046905 2047759 . + . ID=gene-NLI98_RS09785;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=NLI98_RS09785;old_locus_tag=NLI98_09775 NZ_CP100601.1 Protein Homology CDS 2046905 2047759 . + 0 ID=cds-WP_002910393.1;Parent=gene-NLI98_RS09785;Dbxref=Genbank:WP_002910393.1;Name=WP_002910393.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126202.1;locus_tag=NLI98_RS09785;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_002910393.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2047846 2048946 . - . ID=gene-NLI98_RS09790;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=NLI98_RS09790;old_locus_tag=NLI98_09780 NZ_CP100601.1 Protein Homology CDS 2047846 2048946 . - 0 ID=cds-WP_002910392.1;Parent=gene-NLI98_RS09790;Dbxref=Genbank:WP_002910392.1;Name=WP_002910392.1;gbkey=CDS;gene=chaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227528.1;locus_tag=NLI98_RS09790;product=sodium-potassium/proton antiporter ChaA;protein_id=WP_002910392.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2049210 2049440 . + . ID=gene-NLI98_RS09795;Name=chaB;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=NLI98_RS09795;old_locus_tag=NLI98_09785 NZ_CP100601.1 Protein Homology CDS 2049210 2049440 . + 0 ID=cds-WP_002910389.1;Parent=gene-NLI98_RS09795;Dbxref=Genbank:WP_002910389.1;Name=WP_002910389.1;gbkey=CDS;gene=chaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460726.1;locus_tag=NLI98_RS09795;product=putative cation transport regulator ChaB;protein_id=WP_002910389.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2049577 2050257 . + . ID=gene-NLI98_RS09800;Name=NLI98_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09800;old_locus_tag=NLI98_09790 NZ_CP100601.1 Protein Homology CDS 2049577 2050257 . + 0 ID=cds-WP_004152258.1;Parent=gene-NLI98_RS09800;Dbxref=Genbank:WP_004152258.1;Name=WP_004152258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227526.1;locus_tag=NLI98_RS09800;product=gamma-glutamylcyclotransferase;protein_id=WP_004152258.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2050475 2050717 . - . ID=gene-NLI98_RS09805;Name=NLI98_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09805;old_locus_tag=NLI98_09795 NZ_CP100601.1 Protein Homology CDS 2050475 2050717 . - 0 ID=cds-WP_002910387.1;Parent=gene-NLI98_RS09805;Dbxref=Genbank:WP_002910387.1;Name=WP_002910387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227525.1;locus_tag=NLI98_RS09805;product=DUF1883 domain-containing protein;protein_id=WP_002910387.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2050955 2051308 . - . ID=gene-NLI98_RS09810;Name=NLI98_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09810;old_locus_tag=NLI98_09800 NZ_CP100601.1 Protein Homology CDS 2050955 2051308 . - 0 ID=cds-WP_002910380.1;Parent=gene-NLI98_RS09810;Dbxref=Genbank:WP_002910380.1;Name=WP_002910380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227524.1;locus_tag=NLI98_RS09810;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_002910380.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2051376 2052557 . + . ID=gene-NLI98_RS09815;Name=nasR;gbkey=Gene;gene=nasR;gene_biotype=protein_coding;locus_tag=NLI98_RS09815;old_locus_tag=NLI98_09805 NZ_CP100601.1 Protein Homology CDS 2051376 2052557 . + 0 ID=cds-WP_004214922.1;Parent=gene-NLI98_RS09815;Dbxref=Genbank:WP_004214922.1;Name=WP_004214922.1;Note=NasR is a transcription antiterminator and transcriptional regulator for the nasFEDCBA operon;Ontology_term=GO:0031564,GO:0003723;gbkey=CDS;gene=nasR;go_function=RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227523.1;locus_tag=NLI98_RS09815;product=nitrate regulatory protein NasR;protein_id=WP_004214922.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2052800 2054056 . + . ID=gene-NLI98_RS09820;Name=NLI98_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09820;old_locus_tag=NLI98_09810 NZ_CP100601.1 Protein Homology CDS 2052800 2054056 . + 0 ID=cds-WP_088498061.1;Parent=gene-NLI98_RS09820;Dbxref=Genbank:WP_088498061.1;Name=WP_088498061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227521.1;locus_tag=NLI98_RS09820;product=ABC transporter substrate-binding protein;protein_id=WP_088498061.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2054058 2054942 . + . ID=gene-NLI98_RS09825;Name=ntrB;gbkey=Gene;gene=ntrB;gene_biotype=protein_coding;locus_tag=NLI98_RS09825;old_locus_tag=NLI98_09815 NZ_CP100601.1 Protein Homology CDS 2054058 2054942 . + 0 ID=cds-WP_004152255.1;Parent=gene-NLI98_RS09825;Dbxref=Genbank:WP_004152255.1;Name=WP_004152255.1;Ontology_term=GO:0015706,GO:0015414,GO:0005886,GO:0055052;gbkey=CDS;gene=ntrB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nitrate transporter activity|0015414||IEA;go_process=nitrate transmembrane transport|0015706||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900761.1;locus_tag=NLI98_RS09825;product=nitrate ABC transporter permease;protein_id=WP_004152255.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2054952 2055740 . + . ID=gene-NLI98_RS09830;Name=NLI98_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09830;old_locus_tag=NLI98_09820 NZ_CP100601.1 Protein Homology CDS 2054952 2055740 . + 0 ID=cds-WP_004145418.1;Parent=gene-NLI98_RS09830;Dbxref=Genbank:WP_004145418.1;Name=WP_004145418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227518.1;locus_tag=NLI98_RS09830;product=ABC transporter ATP-binding protein;protein_id=WP_004145418.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2055751 2059818 . + . ID=gene-NLI98_RS09835;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=NLI98_RS09835;old_locus_tag=NLI98_09825 NZ_CP100601.1 Protein Homology CDS 2055751 2059818 . + 0 ID=cds-WP_077250511.1;Parent=gene-NLI98_RS09835;Dbxref=Genbank:WP_077250511.1;Name=WP_077250511.1;Ontology_term=GO:0042128,GO:0008942,GO:0016491,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804397.1;locus_tag=NLI98_RS09835;product=nitrite reductase large subunit NirB;protein_id=WP_077250511.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2059818 2062418 . + . ID=gene-NLI98_RS09840;Name=NLI98_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09840;old_locus_tag=NLI98_09830 NZ_CP100601.1 Protein Homology CDS 2059818 2062418 . + 0 ID=cds-WP_086519669.1;Parent=gene-NLI98_RS09840;Dbxref=Genbank:WP_086519669.1;Name=WP_086519669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227515.1;locus_tag=NLI98_RS09840;product=nitrate reductase;protein_id=WP_086519669.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2062570 2063952 . + . ID=gene-NLI98_RS09845;Name=NLI98_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09845;old_locus_tag=NLI98_09835 NZ_CP100601.1 Protein Homology CDS 2062570 2063952 . + 0 ID=cds-WP_002910201.1;Parent=gene-NLI98_RS09845;Dbxref=Genbank:WP_002910201.1;Name=WP_002910201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900763.1;locus_tag=NLI98_RS09845;product=YchO/YchP family invasin;protein_id=WP_002910201.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2063949 2064599 . - . ID=gene-NLI98_RS09850;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=NLI98_RS09850;old_locus_tag=NLI98_09840 NZ_CP100601.1 Protein Homology CDS 2063949 2064599 . - 0 ID=cds-WP_088498059.1;Parent=gene-NLI98_RS09850;Dbxref=Genbank:WP_088498059.1;Name=WP_088498059.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227513.1;locus_tag=NLI98_RS09850;product=two-component system response regulator NarL;protein_id=WP_088498059.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2064610 2066388 . - . ID=gene-NLI98_RS09855;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=NLI98_RS09855;old_locus_tag=NLI98_09845 NZ_CP100601.1 Protein Homology CDS 2064610 2066388 . - 0 ID=cds-WP_004175566.1;Parent=gene-NLI98_RS09855;Dbxref=Genbank:WP_004175566.1;Name=WP_004175566.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227512.1;locus_tag=NLI98_RS09855;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_004175566.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2066700 2068088 . + . ID=gene-NLI98_RS09860;Name=NLI98_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09860;old_locus_tag=NLI98_09850 NZ_CP100601.1 Protein Homology CDS 2066700 2068088 . + 0 ID=cds-WP_004175568.1;Parent=gene-NLI98_RS09860;Dbxref=Genbank:WP_004175568.1;Name=WP_004175568.1;Ontology_term=GO:0015707,GO:0015514,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nitrite efflux transmembrane transporter activity|0015514||IEA;go_process=nitrite transport|0015707||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227511.1;locus_tag=NLI98_RS09860;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_004175568.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2068214 2068327 . + . ID=gene-NLI98_RS09865;Name=NLI98_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09865;old_locus_tag=NLI98_09855 NZ_CP100601.1 Protein Homology CDS 2068214 2068327 . + 0 ID=cds-WP_167875506.1;Parent=gene-NLI98_RS09865;Dbxref=Genbank:WP_167875506.1;Name=WP_167875506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227510.1;locus_tag=NLI98_RS09865;product=hypothetical protein;protein_id=WP_167875506.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2068494 2072237 . + . ID=gene-NLI98_RS09870;Name=NLI98_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09870;old_locus_tag=NLI98_09860 NZ_CP100601.1 Protein Homology CDS 2068494 2072237 . + 0 ID=cds-WP_020802714.1;Parent=gene-NLI98_RS09870;Dbxref=Genbank:WP_020802714.1;Name=WP_020802714.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227509.1;locus_tag=NLI98_RS09870;product=nitrate reductase subunit alpha;protein_id=WP_020802714.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2072234 2073769 . + . ID=gene-NLI98_RS09875;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=NLI98_RS09875;old_locus_tag=NLI98_09865 NZ_CP100601.1 Protein Homology CDS 2072234 2073769 . + 0 ID=cds-WP_002910193.1;Parent=gene-NLI98_RS09875;Dbxref=Genbank:WP_002910193.1;Name=WP_002910193.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227508.1;locus_tag=NLI98_RS09875;product=nitrate reductase subunit beta;protein_id=WP_002910193.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2073766 2074476 . + . ID=gene-NLI98_RS09880;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=NLI98_RS09880;old_locus_tag=NLI98_09870 NZ_CP100601.1 Protein Homology CDS 2073766 2074476 . + 0 ID=cds-WP_002910191.1;Parent=gene-NLI98_RS09880;Dbxref=Genbank:WP_002910191.1;Name=WP_002910191.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227507.1;locus_tag=NLI98_RS09880;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_002910191.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2074476 2075153 . + . ID=gene-NLI98_RS09885;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=NLI98_RS09885;old_locus_tag=NLI98_09875 NZ_CP100601.1 Protein Homology CDS 2074476 2075153 . + 0 ID=cds-WP_002910189.1;Parent=gene-NLI98_RS09885;Dbxref=Genbank:WP_002910189.1;Name=WP_002910189.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227506.1;locus_tag=NLI98_RS09885;product=respiratory nitrate reductase subunit gamma;protein_id=WP_002910189.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2075150 2076046 . - . ID=gene-NLI98_RS09890;Name=NLI98_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09890;old_locus_tag=NLI98_09880 NZ_CP100601.1 Protein Homology CDS 2075150 2076046 . - 0 ID=cds-WP_088498060.1;Parent=gene-NLI98_RS09890;Dbxref=Genbank:WP_088498060.1;Name=WP_088498060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227505.1;locus_tag=NLI98_RS09890;product=DMT family transporter;protein_id=WP_088498060.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2076154 2076597 . + . ID=gene-NLI98_RS09895;Name=NLI98_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09895;old_locus_tag=NLI98_09885 NZ_CP100601.1 Protein Homology CDS 2076154 2076597 . + 0 ID=cds-WP_004180380.1;Parent=gene-NLI98_RS09895;Dbxref=Genbank:WP_004180380.1;Name=WP_004180380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227504.1;locus_tag=NLI98_RS09895;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_004180380.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2076712 2076842 . - . ID=gene-NLI98_RS09900;Name=NLI98_RS09900;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NLI98_RS09900;old_locus_tag=NLI98_09890 NZ_CP100601.1 cmsearch ncRNA 2076712 2076842 . - . ID=rna-NLI98_RS09900;Parent=gene-NLI98_RS09900;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS09900;product=RtT sRNA NZ_CP100601.1 cmsearch exon 2076712 2076842 . - . ID=exon-NLI98_RS09900-1;Parent=rna-NLI98_RS09900;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS09900;product=RtT sRNA NZ_CP100601.1 RefSeq gene 2076887 2077018 . - . ID=gene-NLI98_RS09905;Name=NLI98_RS09905;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NLI98_RS09905;old_locus_tag=NLI98_09895 NZ_CP100601.1 cmsearch ncRNA 2076887 2077018 . - . ID=rna-NLI98_RS09905;Parent=gene-NLI98_RS09905;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS09905;product=RtT sRNA NZ_CP100601.1 cmsearch exon 2076887 2077018 . - . ID=exon-NLI98_RS09905-1;Parent=rna-NLI98_RS09905;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS09905;product=RtT sRNA NZ_CP100601.1 RefSeq gene 2077063 2077147 . - . ID=gene-NLI98_RS09910;Name=NLI98_RS09910;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS09910;old_locus_tag=NLI98_09900 NZ_CP100601.1 tRNAscan-SE tRNA 2077063 2077147 . - . ID=rna-NLI98_RS09910;Parent=gene-NLI98_RS09910;anticodon=(pos:complement(2077111..2077113));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS09910;product=tRNA-Tyr NZ_CP100601.1 tRNAscan-SE exon 2077063 2077147 . - . ID=exon-NLI98_RS09910-1;Parent=rna-NLI98_RS09910;anticodon=(pos:complement(2077111..2077113));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS09910;product=tRNA-Tyr NZ_CP100601.1 RefSeq gene 2077187 2077319 . - . ID=gene-NLI98_RS09915;Name=NLI98_RS09915;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NLI98_RS09915;old_locus_tag=NLI98_09905 NZ_CP100601.1 cmsearch ncRNA 2077187 2077319 . - . ID=rna-NLI98_RS09915;Parent=gene-NLI98_RS09915;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS09915;product=RtT sRNA NZ_CP100601.1 cmsearch exon 2077187 2077319 . - . ID=exon-NLI98_RS09915-1;Parent=rna-NLI98_RS09915;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS09915;product=RtT sRNA NZ_CP100601.1 RefSeq gene 2077363 2077447 . - . ID=gene-NLI98_RS09920;Name=NLI98_RS09920;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS09920;old_locus_tag=NLI98_09910 NZ_CP100601.1 tRNAscan-SE tRNA 2077363 2077447 . - . ID=rna-NLI98_RS09920;Parent=gene-NLI98_RS09920;anticodon=(pos:complement(2077411..2077413));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS09920;product=tRNA-Tyr NZ_CP100601.1 tRNAscan-SE exon 2077363 2077447 . - . ID=exon-NLI98_RS09920-1;Parent=rna-NLI98_RS09920;anticodon=(pos:complement(2077411..2077413));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS09920;product=tRNA-Tyr NZ_CP100601.1 RefSeq gene 2077607 2078449 . - . ID=gene-NLI98_RS09925;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=NLI98_RS09925;old_locus_tag=NLI98_09915 NZ_CP100601.1 Protein Homology CDS 2077607 2078449 . - 0 ID=cds-WP_004151854.1;Parent=gene-NLI98_RS09925;Dbxref=Genbank:WP_004151854.1;Name=WP_004151854.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227503.1;locus_tag=NLI98_RS09925;product=formyltetrahydrofolate deformylase;protein_id=WP_004151854.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2078492 2078950 . - . ID=gene-NLI98_RS09930;Name=NLI98_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09930;old_locus_tag=NLI98_09920 NZ_CP100601.1 Protein Homology CDS 2078492 2078950 . - 0 ID=cds-WP_002910109.1;Parent=gene-NLI98_RS09930;Dbxref=Genbank:WP_002910109.1;Name=WP_002910109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415749.1;locus_tag=NLI98_RS09930;product=YchJ family protein;protein_id=WP_002910109.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2079063 2079965 . + . ID=gene-NLI98_RS09935;Name=rssA;gbkey=Gene;gene=rssA;gene_biotype=protein_coding;locus_tag=NLI98_RS09935;old_locus_tag=NLI98_09925 NZ_CP100601.1 Protein Homology CDS 2079063 2079965 . + 0 ID=cds-WP_002910108.1;Parent=gene-NLI98_RS09935;Dbxref=Genbank:WP_002910108.1;Name=WP_002910108.1;Ontology_term=GO:0006629,GO:0004622;gbkey=CDS;gene=rssA;go_function=lysophospholipase activity|0004622||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227501.1;locus_tag=NLI98_RS09935;product=patatin-like phospholipase RssA;protein_id=WP_002910108.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2080055 2081068 . + . ID=gene-NLI98_RS09940;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=NLI98_RS09940;old_locus_tag=NLI98_09930 NZ_CP100601.1 Protein Homology CDS 2080055 2081068 . + 0 ID=cds-WP_002910107.1;Parent=gene-NLI98_RS09940;Dbxref=Genbank:WP_002910107.1;Name=WP_002910107.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227500.1;locus_tag=NLI98_RS09940;product=two-component system response regulator RssB;protein_id=WP_002910107.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2081266 2082168 . + . ID=gene-NLI98_RS09945;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=NLI98_RS09945;old_locus_tag=NLI98_09935 NZ_CP100601.1 Protein Homology CDS 2081266 2082168 . + 0 ID=cds-WP_002910105.1;Parent=gene-NLI98_RS09945;Dbxref=Genbank:WP_002910105.1;Name=WP_002910105.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227499.1;locus_tag=NLI98_RS09945;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_002910105.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2082290 2082697 . - . ID=gene-NLI98_RS09950;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=NLI98_RS09950;old_locus_tag=NLI98_09940 NZ_CP100601.1 Protein Homology CDS 2082290 2082697 . - 0 ID=cds-WP_002910103.1;Parent=gene-NLI98_RS09950;Dbxref=Genbank:WP_002910103.1;Name=WP_002910103.1;gbkey=CDS;gene=hns;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227498.1;locus_tag=NLI98_RS09950;product=DNA-binding transcriptional regulator H-NS;protein_id=WP_002910103.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2083120 2083251 . - . ID=gene-NLI98_RS09955;Name=NLI98_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09955;old_locus_tag=NLI98_09945 NZ_CP100601.1 Protein Homology CDS 2083120 2083251 . - 0 ID=cds-WP_004145401.1;Parent=gene-NLI98_RS09955;Dbxref=Genbank:WP_004145401.1;Name=WP_004145401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227497.1;locus_tag=NLI98_RS09955;product=hypothetical protein;protein_id=WP_004145401.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2083259 2083876 . + . ID=gene-NLI98_RS09960;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=NLI98_RS09960;old_locus_tag=NLI98_09950 NZ_CP100601.1 Protein Homology CDS 2083259 2083876 . + 0 ID=cds-WP_002910100.1;Parent=gene-NLI98_RS09960;Dbxref=Genbank:WP_002910100.1;Name=WP_002910100.1;gbkey=CDS;gene=tdk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529469.1;locus_tag=NLI98_RS09960;product=thymidine kinase;protein_id=WP_002910100.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2084024 2086699 . - . ID=gene-NLI98_RS09965;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=NLI98_RS09965;old_locus_tag=NLI98_09955 NZ_CP100601.1 Protein Homology CDS 2084024 2086699 . - 0 ID=cds-WP_002910097.1;Parent=gene-NLI98_RS09965;Dbxref=Genbank:WP_002910097.1;Name=WP_002910097.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227495.1;locus_tag=NLI98_RS09965;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_002910097.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2086777 2086992 . + . ID=gene-NLI98_RS09970;Name=NLI98_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09970;old_locus_tag=NLI98_09960 NZ_CP100601.1 Protein Homology CDS 2086777 2086992 . + 0 ID=cds-WP_004145398.1;Parent=gene-NLI98_RS09970;Dbxref=Genbank:WP_004145398.1;Name=WP_004145398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227494.1;locus_tag=NLI98_RS09970;product=hypothetical protein;protein_id=WP_004145398.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2087176 2087823 . + . ID=gene-NLI98_RS09975;Name=NLI98_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09975;old_locus_tag=NLI98_09965 NZ_CP100601.1 Protein Homology CDS 2087176 2087823 . + 0 ID=cds-WP_088498247.1;Parent=gene-NLI98_RS09975;Dbxref=Genbank:WP_088498247.1;Name=WP_088498247.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227493.1;locus_tag=NLI98_RS09975;product=YchE family NAAT transporter;protein_id=WP_088498247.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2088561 2090195 . + . ID=gene-NLI98_RS09980;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=NLI98_RS09980;old_locus_tag=NLI98_09970 NZ_CP100601.1 Protein Homology CDS 2088561 2090195 . + 0 ID=cds-WP_004148754.1;Parent=gene-NLI98_RS09980;Dbxref=Genbank:WP_004148754.1;Name=WP_004148754.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227491.1;locus_tag=NLI98_RS09980;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_004148754.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2090281 2091201 . + . ID=gene-NLI98_RS09985;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=NLI98_RS09985;old_locus_tag=NLI98_09975 NZ_CP100601.1 Protein Homology CDS 2090281 2091201 . + 0 ID=cds-WP_002910089.1;Parent=gene-NLI98_RS09985;Dbxref=Genbank:WP_002910089.1;Name=WP_002910089.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=NLI98_RS09985;product=oligopeptide ABC transporter permease OppB;protein_id=WP_002910089.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2091216 2092124 . + . ID=gene-NLI98_RS09990;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=NLI98_RS09990;old_locus_tag=NLI98_09980 NZ_CP100601.1 Protein Homology CDS 2091216 2092124 . + 0 ID=cds-WP_004145396.1;Parent=gene-NLI98_RS09990;Dbxref=Genbank:WP_004145396.1;Name=WP_004145396.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=NLI98_RS09990;product=oligopeptide ABC transporter permease OppC;protein_id=WP_004145396.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2092136 2093149 . + . ID=gene-NLI98_RS09995;Name=NLI98_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS09995;old_locus_tag=NLI98_09985 NZ_CP100601.1 Protein Homology CDS 2092136 2093149 . + 0 ID=cds-WP_061891653.1;Parent=gene-NLI98_RS09995;Dbxref=Genbank:WP_061891653.1;Name=WP_061891653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227488.1;locus_tag=NLI98_RS09995;product=ABC transporter ATP-binding protein;protein_id=WP_061891653.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2093146 2094150 . + . ID=gene-NLI98_RS10000;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=NLI98_RS10000;old_locus_tag=NLI98_09990 NZ_CP100601.1 Protein Homology CDS 2093146 2094150 . + 0 ID=cds-WP_002910083.1;Parent=gene-NLI98_RS10000;Dbxref=Genbank:WP_002910083.1;Name=WP_002910083.1;gbkey=CDS;gene=oppF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227487.1;locus_tag=NLI98_RS10000;product=murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppF;protein_id=WP_002910083.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2094205 2095032 . + . ID=gene-NLI98_RS10005;Name=NLI98_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10005;old_locus_tag=NLI98_09995 NZ_CP100601.1 Protein Homology CDS 2094205 2095032 . + 0 ID=cds-WP_002910080.1;Parent=gene-NLI98_RS10005;Dbxref=Genbank:WP_002910080.1;Name=WP_002910080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227486.1;locus_tag=NLI98_RS10005;product=ion transporter;protein_id=WP_002910080.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2095095 2095424 . - . ID=gene-NLI98_RS10010;Name=NLI98_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10010;old_locus_tag=NLI98_10000 NZ_CP100601.1 Protein Homology CDS 2095095 2095424 . - 0 ID=cds-WP_002910079.1;Parent=gene-NLI98_RS10010;Dbxref=Genbank:WP_002910079.1;Name=WP_002910079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227485.1;locus_tag=NLI98_RS10010;product=HI1450 family dsDNA-mimic protein;protein_id=WP_002910079.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2095459 2096919 . - . ID=gene-NLI98_RS10015;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=NLI98_RS10015;old_locus_tag=NLI98_10005 NZ_CP100601.1 Protein Homology CDS 2095459 2096919 . - 0 ID=cds-WP_002910077.1;Parent=gene-NLI98_RS10015;Dbxref=Genbank:WP_002910077.1;Name=WP_002910077.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126413.1;locus_tag=NLI98_RS10015;product=cardiolipin synthase;protein_id=WP_002910077.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2097063 2097236 . + . ID=gene-NLI98_RS10020;Name=NLI98_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10020;old_locus_tag=NLI98_10010 NZ_CP100601.1 Protein Homology CDS 2097063 2097236 . + 0 ID=cds-WP_004194006.1;Parent=gene-NLI98_RS10020;Dbxref=Genbank:WP_004194006.1;Name=WP_004194006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194006.1;locus_tag=NLI98_RS10020;product=YciY family protein;protein_id=WP_004194006.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2097739 2098386 . - . ID=gene-NLI98_RS10025;Name=NLI98_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10025;old_locus_tag=NLI98_10015 NZ_CP100601.1 Protein Homology CDS 2097739 2098386 . - 0 ID=cds-WP_074185487.1;Parent=gene-NLI98_RS10025;Dbxref=Genbank:WP_074185487.1;Name=WP_074185487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227481.1;locus_tag=NLI98_RS10025;product=YceI family protein;protein_id=WP_074185487.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2098815 2098955 . - . ID=gene-NLI98_RS10030;Name=NLI98_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10030;old_locus_tag=NLI98_10020 NZ_CP100601.1 Protein Homology CDS 2098815 2098955 . - 0 ID=cds-WP_009485717.1;Parent=gene-NLI98_RS10030;Dbxref=Genbank:WP_009485717.1;Name=WP_009485717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227480.1;locus_tag=NLI98_RS10030;product=hypothetical protein;protein_id=WP_009485717.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2099068 2099364 . - . ID=gene-NLI98_RS10035;Name=NLI98_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10035;old_locus_tag=NLI98_10025 NZ_CP100601.1 Protein Homology CDS 2099068 2099364 . - 0 ID=cds-WP_002910042.1;Parent=gene-NLI98_RS10035;Dbxref=Genbank:WP_002910042.1;Name=WP_002910042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227479.1;locus_tag=NLI98_RS10035;product=YciI family protein;protein_id=WP_002910042.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2099575 2100321 . + . ID=gene-NLI98_RS10040;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=NLI98_RS10040;old_locus_tag=NLI98_10030 NZ_CP100601.1 Protein Homology CDS 2099575 2100321 . + 0 ID=cds-WP_004145385.1;Parent=gene-NLI98_RS10040;Dbxref=Genbank:WP_004145385.1;Name=WP_004145385.1;Ontology_term=GO:0015891,GO:0055085,GO:0015343,GO:0030288;gbkey=CDS;gene=tonB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020317059.1;locus_tag=NLI98_RS10040;product=TonB system transport protein TonB;protein_id=WP_004145385.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2100365 2101237 . - . ID=gene-NLI98_RS10045;Name=NLI98_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10045;old_locus_tag=NLI98_10035 NZ_CP100601.1 Protein Homology CDS 2100365 2101237 . - 0 ID=cds-WP_002910036.1;Parent=gene-NLI98_RS10045;Dbxref=Genbank:WP_002910036.1;Name=WP_002910036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227477.1;locus_tag=NLI98_RS10045;product=fructosamine kinase family protein;protein_id=WP_002910036.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2101343 2101627 . - . ID=gene-NLI98_RS10050;Name=ghoS;gbkey=Gene;gene=ghoS;gene_biotype=protein_coding;locus_tag=NLI98_RS10050;old_locus_tag=NLI98_10040 NZ_CP100601.1 Protein Homology CDS 2101343 2101627 . - 0 ID=cds-WP_002910033.1;Parent=gene-NLI98_RS10050;Dbxref=Genbank:WP_002910033.1;Name=WP_002910033.1;Ontology_term=GO:0004521;gbkey=CDS;gene=ghoS;go_function=endoribonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227476.1;locus_tag=NLI98_RS10050;product=type V toxin-antitoxin system endoribonuclease antitoxin GhoS;protein_id=WP_002910033.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2101722 2102654 . - . ID=gene-NLI98_RS10055;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=NLI98_RS10055;old_locus_tag=NLI98_10045 NZ_CP100601.1 Protein Homology CDS 2101722 2102654 . - 0 ID=cds-WP_004145382.1;Parent=gene-NLI98_RS10055;Dbxref=Genbank:WP_004145382.1;Name=WP_004145382.1;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;gene=pfkB;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227475.1;locus_tag=NLI98_RS10055;product=6-phosphofructokinase II;protein_id=WP_004145382.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2103011 2103769 . + . ID=gene-NLI98_RS10060;Name=NLI98_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10060;old_locus_tag=NLI98_10050 NZ_CP100601.1 Protein Homology CDS 2103011 2103769 . + 0 ID=cds-WP_002910030.1;Parent=gene-NLI98_RS10060;Dbxref=Genbank:WP_002910030.1;Name=WP_002910030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310455.1;locus_tag=NLI98_RS10060;product=YdiY family protein;protein_id=WP_002910030.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2104041 2104274 . + . ID=gene-NLI98_RS10065;Name=NLI98_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10065;old_locus_tag=NLI98_10055 NZ_CP100601.1 Protein Homology CDS 2104041 2104274 . + 0 ID=cds-WP_002910028.1;Parent=gene-NLI98_RS10065;Dbxref=Genbank:WP_002910028.1;Name=WP_002910028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227473.1;locus_tag=NLI98_RS10065;product=hypothetical protein;protein_id=WP_002910028.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2104707 2106635 . + . ID=gene-NLI98_RS10070;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=NLI98_RS10070;old_locus_tag=NLI98_10060 NZ_CP100601.1 Protein Homology CDS 2104707 2106635 . + 0 ID=cds-WP_002910026.1;Parent=gene-NLI98_RS10070;Dbxref=Genbank:WP_002910026.1;Name=WP_002910026.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006894721.1;locus_tag=NLI98_RS10070;product=threonine--tRNA ligase;protein_id=WP_002910026.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2106639 2107181 . + . ID=gene-NLI98_RS10075;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=NLI98_RS10075;old_locus_tag=NLI98_10065 NZ_CP100601.1 Protein Homology CDS 2106639 2107181 . + 0 ID=cds-WP_004189469.1;Parent=gene-NLI98_RS10075;Dbxref=Genbank:WP_004189469.1;Name=WP_004189469.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310452.1;locus_tag=NLI98_RS10075;product=translation initiation factor IF-3;protein_id=WP_004189469.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2107274 2107471 . + . ID=gene-NLI98_RS10080;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=NLI98_RS10080;old_locus_tag=NLI98_10070 NZ_CP100601.1 Protein Homology CDS 2107274 2107471 . + 0 ID=cds-WP_001124225.1;Parent=gene-NLI98_RS10080;Dbxref=Genbank:WP_001124225.1;Name=WP_001124225.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=NLI98_RS10080;product=50S ribosomal protein L35;protein_id=WP_001124225.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2107522 2107878 . + . ID=gene-NLI98_RS10085;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=NLI98_RS10085;old_locus_tag=NLI98_10075 NZ_CP100601.1 Protein Homology CDS 2107522 2107878 . + 0 ID=cds-WP_000124850.1;Parent=gene-NLI98_RS10085;Dbxref=Genbank:WP_000124850.1;Name=WP_000124850.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310450.1;locus_tag=NLI98_RS10085;product=50S ribosomal protein L20;protein_id=WP_000124850.1;transl_table=11 NZ_CP100601.1 cmsearch sequence_feature 2107997 2108121 . + . ID=id-NZ_CP100601.1:2107997..2108121;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP100601.1 RefSeq gene 2108002 2108046 . + . ID=gene-NLI98_RS10090;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=NLI98_RS10090;old_locus_tag=NLI98_10080 NZ_CP100601.1 Protein Homology CDS 2108002 2108046 . + 0 ID=cds-WP_001386830.1;Parent=gene-NLI98_RS10090;Dbxref=Genbank:WP_001386830.1;Name=WP_001386830.1;gbkey=CDS;gene=pheM;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310449.1;locus_tag=NLI98_RS10090;product=pheST operon leader peptide PheM;protein_id=WP_001386830.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2108185 2109168 . + . ID=gene-NLI98_RS10095;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=NLI98_RS10095;old_locus_tag=NLI98_10085 NZ_CP100601.1 Protein Homology CDS 2108185 2109168 . + 0 ID=cds-WP_004184569.1;Parent=gene-NLI98_RS10095;Dbxref=Genbank:WP_004184569.1;Name=WP_004184569.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=NLI98_RS10095;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_004184569.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2109184 2111571 . + . ID=gene-NLI98_RS10100;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=NLI98_RS10100;old_locus_tag=NLI98_10090 NZ_CP100601.1 Protein Homology CDS 2109184 2111571 . + 0 ID=cds-WP_015958605.1;Parent=gene-NLI98_RS10100;Dbxref=Genbank:WP_015958605.1;Name=WP_015958605.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227468.1;locus_tag=NLI98_RS10100;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_015958605.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2111576 2111875 . + . ID=gene-NLI98_RS10105;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=NLI98_RS10105;old_locus_tag=NLI98_10095 NZ_CP100601.1 Protein Homology CDS 2111576 2111875 . + 0 ID=cds-WP_002909098.1;Parent=gene-NLI98_RS10105;Dbxref=Genbank:WP_002909098.1;Name=WP_002909098.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227467.1;locus_tag=NLI98_RS10105;product=integration host factor subunit alpha;protein_id=WP_002909098.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2111928 2112281 . - . ID=gene-NLI98_RS10110;Name=NLI98_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10110;old_locus_tag=NLI98_10100 NZ_CP100601.1 Protein Homology CDS 2111928 2112281 . - 0 ID=cds-WP_002909094.1;Parent=gene-NLI98_RS10110;Dbxref=Genbank:WP_002909094.1;Name=WP_002909094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227466.1;locus_tag=NLI98_RS10110;product=RidA family protein;protein_id=WP_002909094.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2112278 2113531 . - . ID=gene-NLI98_RS10115;Name=NLI98_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10115;old_locus_tag=NLI98_10105 NZ_CP100601.1 Protein Homology CDS 2112278 2113531 . - 0 ID=cds-WP_088498248.1;Parent=gene-NLI98_RS10115;Dbxref=Genbank:WP_088498248.1;Name=WP_088498248.1;Ontology_term=GO:0019478,GO:0008718;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA;go_process=D-amino acid catabolic process|0019478||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227465.1;locus_tag=NLI98_RS10115;product=D-amino acid dehydrogenase;protein_id=WP_088498248.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2113581 2114495 . - . ID=gene-NLI98_RS10120;Name=NLI98_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10120;old_locus_tag=NLI98_10110 NZ_CP100601.1 Protein Homology CDS 2113581 2114495 . - 0 ID=cds-WP_004189476.1;Parent=gene-NLI98_RS10120;Dbxref=Genbank:WP_004189476.1;Name=WP_004189476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227464.1;locus_tag=NLI98_RS10120;product=LysR family transcriptional regulator;protein_id=WP_004189476.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2114776 2116209 . + . ID=gene-NLI98_RS10125;Name=NLI98_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10125;old_locus_tag=NLI98_10115 NZ_CP100601.1 Protein Homology CDS 2114776 2116209 . + 0 ID=cds-WP_088498249.1;Parent=gene-NLI98_RS10125;Dbxref=Genbank:WP_088498249.1;Name=WP_088498249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227463.1;locus_tag=NLI98_RS10125;product=gluconate:proton symporter;protein_id=WP_088498249.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2116333 2117319 . + . ID=gene-NLI98_RS10130;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=NLI98_RS10130;old_locus_tag=NLI98_10120 NZ_CP100601.1 Protein Homology CDS 2116333 2117319 . + 0 ID=cds-WP_004151850.1;Parent=gene-NLI98_RS10130;Dbxref=Genbank:WP_004151850.1;Name=WP_004151850.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227462.1;locus_tag=NLI98_RS10130;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_004151850.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2117356 2118156 . - . ID=gene-NLI98_RS10135;Name=NLI98_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10135;old_locus_tag=NLI98_10125 NZ_CP100601.1 Protein Homology CDS 2117356 2118156 . - 0 ID=cds-WP_002909085.1;Parent=gene-NLI98_RS10135;Dbxref=Genbank:WP_002909085.1;Name=WP_002909085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102954.1;locus_tag=NLI98_RS10135;product=MetQ/NlpA family lipoprotein;protein_id=WP_002909085.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2118393 2118944 . + . ID=gene-NLI98_RS10140;Name=NLI98_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10140;old_locus_tag=NLI98_10130 NZ_CP100601.1 Protein Homology CDS 2118393 2118944 . + 0 ID=cds-WP_004180371.1;Parent=gene-NLI98_RS10140;Dbxref=Genbank:WP_004180371.1;Name=WP_004180371.1;Ontology_term=GO:0006979,GO:0004602;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227460.1;locus_tag=NLI98_RS10140;product=glutathione peroxidase;protein_id=WP_004180371.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2118944 2119693 . + . ID=gene-NLI98_RS10145;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=NLI98_RS10145;old_locus_tag=NLI98_10135 NZ_CP100601.1 Protein Homology CDS 2118944 2119693 . + 0 ID=cds-WP_002909083.1;Parent=gene-NLI98_RS10145;Dbxref=Genbank:WP_002909083.1;Name=WP_002909083.1;Ontology_term=GO:0015889,GO:0005524;gbkey=CDS;gene=btuD;go_function=ATP binding|0005524||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227459.1;locus_tag=NLI98_RS10145;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_002909083.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2119775 2120239 . + . ID=gene-NLI98_RS10150;Name=NLI98_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10150;old_locus_tag=NLI98_10140 NZ_CP100601.1 Protein Homology CDS 2119775 2120239 . + 0 ID=cds-WP_002909082.1;Parent=gene-NLI98_RS10150;Dbxref=Genbank:WP_002909082.1;Name=WP_002909082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227458.1;locus_tag=NLI98_RS10150;product=NlpC/P60 family protein;protein_id=WP_002909082.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2120353 2121795 . + . ID=gene-NLI98_RS10155;Name=selO;gbkey=Gene;gene=selO;gene_biotype=protein_coding;locus_tag=NLI98_RS10155;old_locus_tag=NLI98_10145 NZ_CP100601.1 Protein Homology CDS 2120353 2121795 . + 0 ID=cds-WP_009307610.1;Parent=gene-NLI98_RS10155;Dbxref=Genbank:WP_009307610.1;Name=WP_009307610.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;gene=selO;go_function=ATP binding|0005524||IEA,protein adenylyltransferase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227457.1;locus_tag=NLI98_RS10155;product=protein adenylyltransferase SelO;protein_id=WP_009307610.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2121825 2122004 . - . ID=gene-NLI98_RS10160;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=NLI98_RS10160;old_locus_tag=NLI98_10150 NZ_CP100601.1 Protein Homology CDS 2121825 2122004 . - 0 ID=cds-WP_014343179.1;Parent=gene-NLI98_RS10160;Dbxref=Genbank:WP_014343179.1;Name=WP_014343179.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227456.1;locus_tag=NLI98_RS10160;product=hemin uptake protein HemP;protein_id=WP_014343179.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2122160 2123206 . - . ID=gene-NLI98_RS10165;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=NLI98_RS10165;old_locus_tag=NLI98_10155 NZ_CP100601.1 Protein Homology CDS 2122160 2123206 . - 0 ID=cds-WP_004180369.1;Parent=gene-NLI98_RS10165;Dbxref=Genbank:WP_004180369.1;Name=WP_004180369.1;gbkey=CDS;gene=aroH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004175613.1;locus_tag=NLI98_RS10165;product=3-deoxy-7-phosphoheptulonate synthase AroH;protein_id=WP_004180369.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2123361 2124194 . - . ID=gene-NLI98_RS10170;Name=NLI98_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10170;old_locus_tag=NLI98_10160 NZ_CP100601.1 Protein Homology CDS 2123361 2124194 . - 0 ID=cds-WP_002909061.1;Parent=gene-NLI98_RS10170;Dbxref=Genbank:WP_002909061.1;Name=WP_002909061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227454.1;locus_tag=NLI98_RS10170;product=kinase/pyrophosphorylase;protein_id=WP_002909061.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2124339 2124458 . - . ID=gene-NLI98_RS10175;Name=NLI98_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10175;old_locus_tag=NLI98_10165 NZ_CP100601.1 Protein Homology CDS 2124339 2124458 . - 0 ID=cds-WP_009484225.1;Parent=gene-NLI98_RS10175;Dbxref=Genbank:WP_009484225.1;Name=WP_009484225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227453.1;locus_tag=NLI98_RS10175;product=hypothetical protein;protein_id=WP_009484225.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2124534 2126912 . + . ID=gene-NLI98_RS10180;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=NLI98_RS10180;old_locus_tag=NLI98_10170 NZ_CP100601.1 Protein Homology CDS 2124534 2126912 . + 0 ID=cds-WP_002909055.1;Parent=gene-NLI98_RS10180;Dbxref=Genbank:WP_002909055.1;Name=WP_002909055.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227452.1;locus_tag=NLI98_RS10180;product=phosphoenolpyruvate synthase;protein_id=WP_002909055.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2127301 2127930 . + . ID=gene-NLI98_RS10185;Name=NLI98_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10185;old_locus_tag=NLI98_10175 NZ_CP100601.1 GeneMarkS-2+ CDS 2127301 2127930 . + 0 ID=cds-WP_139130638.1;Parent=gene-NLI98_RS10185;Dbxref=Genbank:WP_139130638.1;Name=WP_139130638.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS10185;product=hypothetical protein;protein_id=WP_139130638.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2127967 2128074 . - . ID=gene-NLI98_RS10190;Name=rprA;gbkey=Gene;gene=rprA;gene_biotype=antisense_RNA;locus_tag=NLI98_RS10190;old_locus_tag=NLI98_10180 NZ_CP100601.1 cmsearch antisense_RNA 2127967 2128074 . - . ID=rna-NLI98_RS10190;Parent=gene-NLI98_RS10190;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS10190;product=antisense sRNA RprA NZ_CP100601.1 cmsearch exon 2127967 2128074 . - . ID=exon-NLI98_RS10190-1;Parent=rna-NLI98_RS10190;Dbxref=RFAM:RF00034;gbkey=ncRNA;gene=rprA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS10190;product=antisense sRNA RprA NZ_CP100601.1 RefSeq gene 2128263 2129375 . - . ID=gene-NLI98_RS10195;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=NLI98_RS10195;old_locus_tag=NLI98_10185 NZ_CP100601.1 Protein Homology CDS 2128263 2129375 . - 0 ID=cds-WP_004148729.1;Parent=gene-NLI98_RS10195;Dbxref=Genbank:WP_004148729.1;Name=WP_004148729.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227451.1;locus_tag=NLI98_RS10195;product=AI-2E family transporter YdiK;protein_id=WP_004148729.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2129594 2132650 . + . ID=gene-NLI98_RS10200;Name=NLI98_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10200;old_locus_tag=NLI98_10190 NZ_CP100601.1 Protein Homology CDS 2129594 2132650 . + 0 ID=cds-WP_015958598.1;Parent=gene-NLI98_RS10200;Dbxref=Genbank:WP_015958598.1;Name=WP_015958598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189481.1;locus_tag=NLI98_RS10200;product=FAD-binding oxidoreductase;protein_id=WP_015958598.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2132647 2133057 . + . ID=gene-NLI98_RS10205;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=NLI98_RS10205;old_locus_tag=NLI98_10195 NZ_CP100601.1 Protein Homology CDS 2132647 2133057 . + 0 ID=cds-WP_002909015.1;Parent=gene-NLI98_RS10205;Dbxref=Genbank:WP_002909015.1;Name=WP_002909015.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227448.1;locus_tag=NLI98_RS10205;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_002909015.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2133262 2133510 . + . ID=gene-NLI98_RS10210;Name=NLI98_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10210;old_locus_tag=NLI98_10200 NZ_CP100601.1 Protein Homology CDS 2133262 2133510 . + 0 ID=cds-WP_002909014.1;Parent=gene-NLI98_RS10210;Dbxref=Genbank:WP_002909014.1;Name=WP_002909014.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227447.1;locus_tag=NLI98_RS10210;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_002909014.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2133608 2133928 . - . ID=gene-NLI98_RS10215;Name=NLI98_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10215;old_locus_tag=NLI98_10205 NZ_CP100601.1 Protein Homology CDS 2133608 2133928 . - 0 ID=cds-WP_002909010.1;Parent=gene-NLI98_RS10215;Dbxref=Genbank:WP_002909010.1;Name=WP_002909010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227446.1;locus_tag=NLI98_RS10215;product=hypothetical protein;protein_id=WP_002909010.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2134498 2135478 . + . ID=gene-NLI98_RS10220;Name=NLI98_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10220;old_locus_tag=NLI98_10210 NZ_CP100601.1 Protein Homology CDS 2134498 2135478 . + 0 ID=cds-WP_002909008.1;Parent=gene-NLI98_RS10220;Dbxref=Genbank:WP_002909008.1;Name=WP_002909008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227445.1;locus_tag=NLI98_RS10220;product=DUF1852 domain-containing protein;protein_id=WP_002909008.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2135502 2136533 . + . ID=gene-NLI98_RS10225;Name=NLI98_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10225;old_locus_tag=NLI98_10215 NZ_CP100601.1 Protein Homology CDS 2135502 2136533 . + 0 ID=cds-WP_002909005.1;Parent=gene-NLI98_RS10225;Dbxref=Genbank:WP_002909005.1;Name=WP_002909005.1;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227444.1;locus_tag=NLI98_RS10225;product=methionine synthase;protein_id=WP_002909005.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2136616 2137803 . - . ID=gene-NLI98_RS10230;Name=NLI98_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10230;old_locus_tag=NLI98_10220 NZ_CP100601.1 Protein Homology CDS 2136616 2137803 . - 0 ID=cds-WP_074184769.1;Parent=gene-NLI98_RS10230;Dbxref=Genbank:WP_074184769.1;Name=WP_074184769.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227443.1;locus_tag=NLI98_RS10230;product=MFS transporter;protein_id=WP_074184769.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2137860 2138621 . - . ID=gene-NLI98_RS10235;Name=NLI98_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10235;old_locus_tag=NLI98_10225 NZ_CP100601.1 Protein Homology CDS 2137860 2138621 . - 0 ID=cds-WP_004212506.1;Parent=gene-NLI98_RS10235;Dbxref=Genbank:WP_004212506.1;Name=WP_004212506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000020503.1;locus_tag=NLI98_RS10235;product=ABC transporter ATP-binding protein;protein_id=WP_004212506.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2138621 2139658 . - . ID=gene-NLI98_RS10240;Name=NLI98_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10240;old_locus_tag=NLI98_10230 NZ_CP100601.1 Protein Homology CDS 2138621 2139658 . - 0 ID=cds-WP_032411769.1;Parent=gene-NLI98_RS10240;Dbxref=Genbank:WP_032411769.1;Name=WP_032411769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227440.1;locus_tag=NLI98_RS10240;product=iron ABC transporter permease;protein_id=WP_032411769.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2139658 2140656 . - . ID=gene-NLI98_RS10245;Name=NLI98_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10245;old_locus_tag=NLI98_10235 NZ_CP100601.1 Protein Homology CDS 2139658 2140656 . - 0 ID=cds-WP_004200258.1;Parent=gene-NLI98_RS10245;Dbxref=Genbank:WP_004200258.1;Name=WP_004200258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227439.1;locus_tag=NLI98_RS10245;product=ABC transporter substrate-binding protein;protein_id=WP_004200258.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2140815 2141726 . - . ID=gene-NLI98_RS10250;Name=NLI98_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10250;old_locus_tag=NLI98_10240 NZ_CP100601.1 Protein Homology CDS 2140815 2141726 . - 0 ID=cds-WP_004200256.1;Parent=gene-NLI98_RS10250;Dbxref=Genbank:WP_004200256.1;Name=WP_004200256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227438.1;locus_tag=NLI98_RS10250;product=LysR family transcriptional regulator;protein_id=WP_004200256.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2141823 2142818 . + . ID=gene-NLI98_RS10255;Name=NLI98_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10255;old_locus_tag=NLI98_10245 NZ_CP100601.1 Protein Homology CDS 2141823 2142818 . + 0 ID=cds-WP_004200255.1;Parent=gene-NLI98_RS10255;Dbxref=Genbank:WP_004200255.1;Name=WP_004200255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227437.1;locus_tag=NLI98_RS10255;product=NAD(P)H-binding protein;protein_id=WP_004200255.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2142914 2143528 . + . ID=gene-NLI98_RS10260;Name=NLI98_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10260;old_locus_tag=NLI98_10250 NZ_CP100601.1 Protein Homology CDS 2142914 2143528 . + 0 ID=cds-WP_002908963.1;Parent=gene-NLI98_RS10260;Dbxref=Genbank:WP_002908963.1;Name=WP_002908963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541387.1;locus_tag=NLI98_RS10260;product=TetR/AcrR family transcriptional regulator;protein_id=WP_002908963.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2143603 2144712 . + . ID=gene-NLI98_RS10265;Name=NLI98_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10265;old_locus_tag=NLI98_10255 NZ_CP100601.1 Protein Homology CDS 2143603 2144712 . + 0 ID=cds-WP_048993260.1;Parent=gene-NLI98_RS10265;Dbxref=Genbank:WP_048993260.1;Name=WP_048993260.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227435.1;locus_tag=NLI98_RS10265;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_048993260.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2144709 2147801 . + . ID=gene-NLI98_RS10270;Name=NLI98_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10270;old_locus_tag=NLI98_10260 NZ_CP100601.1 Protein Homology CDS 2144709 2147801 . + 0 ID=cds-WP_088498250.1;Parent=gene-NLI98_RS10270;Dbxref=Genbank:WP_088498250.1;Name=WP_088498250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227434.1;locus_tag=NLI98_RS10270;product=efflux RND transporter permease subunit;protein_id=WP_088498250.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2147857 2149041 . - . ID=gene-NLI98_RS10275;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=NLI98_RS10275;old_locus_tag=NLI98_10265 NZ_CP100601.1 Protein Homology CDS 2147857 2149041 . - 0 ID=cds-WP_004151846.1;Parent=gene-NLI98_RS10275;Dbxref=Genbank:WP_004151846.1;Name=WP_004151846.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227433.1;locus_tag=NLI98_RS10275;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_004151846.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2149296 2149928 . - . ID=gene-NLI98_RS10280;Name=NLI98_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10280;old_locus_tag=NLI98_10270 NZ_CP100601.1 Protein Homology CDS 2149296 2149928 . - 0 ID=cds-WP_002908882.1;Parent=gene-NLI98_RS10280;Dbxref=Genbank:WP_002908882.1;Name=WP_002908882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227432.1;locus_tag=NLI98_RS10280;product=TetR/AcrR family transcriptional regulator;protein_id=WP_002908882.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2149925 2150320 . - . ID=gene-NLI98_RS10285;Name=NLI98_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10285;old_locus_tag=NLI98_10275 NZ_CP100601.1 Protein Homology CDS 2149925 2150320 . - 0 ID=cds-WP_004143228.1;Parent=gene-NLI98_RS10285;Dbxref=Genbank:WP_004143228.1;Name=WP_004143228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227431.1;locus_tag=NLI98_RS10285;product=DoxX family protein;protein_id=WP_004143228.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2150421 2150558 . - . ID=gene-NLI98_RS10290;Name=NLI98_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10290;old_locus_tag=NLI98_10280 NZ_CP100601.1 Protein Homology CDS 2150421 2150558 . - 0 ID=cds-WP_014343173.1;Parent=gene-NLI98_RS10290;Dbxref=Genbank:WP_014343173.1;Name=WP_014343173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227430.1;locus_tag=NLI98_RS10290;product=hypothetical protein;protein_id=WP_014343173.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2150557 2150754 . + . ID=gene-NLI98_RS10295;Name=NLI98_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10295;old_locus_tag=NLI98_10285 NZ_CP100601.1 Protein Homology CDS 2150557 2150754 . + 0 ID=cds-WP_002908880.1;Parent=gene-NLI98_RS10295;Dbxref=Genbank:WP_002908880.1;Name=WP_002908880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227429.1;locus_tag=NLI98_RS10295;product=hypothetical protein;protein_id=WP_002908880.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2151238 2151615 . + . ID=gene-NLI98_RS10300;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=NLI98_RS10300;old_locus_tag=NLI98_10290 NZ_CP100601.1 Protein Homology CDS 2151238 2151615 . + 0 ID=cds-WP_004143232.1;Parent=gene-NLI98_RS10300;Dbxref=Genbank:WP_004143232.1;Name=WP_004143232.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227426.1;locus_tag=NLI98_RS10300;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_004143232.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2151618 2153105 . + . ID=gene-NLI98_RS10305;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=NLI98_RS10305;old_locus_tag=NLI98_10295 NZ_CP100601.1 Protein Homology CDS 2151618 2153105 . + 0 ID=cds-WP_088498251.1;Parent=gene-NLI98_RS10305;Dbxref=Genbank:WP_088498251.1;Name=WP_088498251.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227425.1;locus_tag=NLI98_RS10305;product=Fe-S cluster assembly protein SufB;protein_id=WP_088498251.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2153122 2153868 . + . ID=gene-NLI98_RS10310;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=NLI98_RS10310;old_locus_tag=NLI98_10300 NZ_CP100601.1 Protein Homology CDS 2153122 2153868 . + 0 ID=cds-WP_002908876.1;Parent=gene-NLI98_RS10310;Dbxref=Genbank:WP_002908876.1;Name=WP_002908876.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500629.1;locus_tag=NLI98_RS10310;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_002908876.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2153843 2155117 . + . ID=gene-NLI98_RS10315;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=NLI98_RS10315;old_locus_tag=NLI98_10305 NZ_CP100601.1 Protein Homology CDS 2153843 2155117 . + 0 ID=cds-WP_002908869.1;Parent=gene-NLI98_RS10315;Dbxref=Genbank:WP_002908869.1;Name=WP_002908869.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227423.1;locus_tag=NLI98_RS10315;product=Fe-S cluster assembly protein SufD;protein_id=WP_002908869.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2155114 2156334 . + . ID=gene-NLI98_RS10320;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=NLI98_RS10320;old_locus_tag=NLI98_10310 NZ_CP100601.1 Protein Homology CDS 2155114 2156334 . + 0 ID=cds-WP_002908867.1;Parent=gene-NLI98_RS10320;Dbxref=Genbank:WP_002908867.1;Name=WP_002908867.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227422.1;locus_tag=NLI98_RS10320;product=cysteine desulfurase SufS;protein_id=WP_002908867.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2156346 2156762 . + . ID=gene-NLI98_RS10325;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=NLI98_RS10325;old_locus_tag=NLI98_10315 NZ_CP100601.1 Protein Homology CDS 2156346 2156762 . + 0 ID=cds-WP_002908865.1;Parent=gene-NLI98_RS10325;Dbxref=Genbank:WP_002908865.1;Name=WP_002908865.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227421.1;locus_tag=NLI98_RS10325;product=cysteine desulfuration protein SufE;protein_id=WP_002908865.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2156862 2157848 . + . ID=gene-NLI98_RS10330;Name=NLI98_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10330;old_locus_tag=NLI98_10320 NZ_CP100601.1 Protein Homology CDS 2156862 2157848 . + 0 ID=cds-WP_040222645.1;Parent=gene-NLI98_RS10330;Dbxref=Genbank:WP_040222645.1;Name=WP_040222645.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227420.1;locus_tag=NLI98_RS10330;product=L%2CD-transpeptidase family protein;protein_id=WP_040222645.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2157910 2158146 . - . ID=gene-NLI98_RS10335;Name=NLI98_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10335;old_locus_tag=NLI98_10325 NZ_CP100601.1 Protein Homology CDS 2157910 2158146 . - 0 ID=cds-WP_002908860.1;Parent=gene-NLI98_RS10335;Dbxref=Genbank:WP_002908860.1;Name=WP_002908860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157411.1;locus_tag=NLI98_RS10335;product=major outer membrane lipoprotein;protein_id=WP_002908860.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2158459 2159871 . - . ID=gene-NLI98_RS10340;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=NLI98_RS10340;old_locus_tag=NLI98_10330 NZ_CP100601.1 Protein Homology CDS 2158459 2159871 . - 0 ID=cds-WP_002908859.1;Parent=gene-NLI98_RS10340;Dbxref=Genbank:WP_002908859.1;Name=WP_002908859.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=NLI98_RS10340;product=pyruvate kinase PykF;protein_id=WP_002908859.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2160009 2160140 . + . ID=gene-NLI98_RS10345;Name=NLI98_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10345;old_locus_tag=NLI98_10335 NZ_CP100601.1 Protein Homology CDS 2160009 2160140 . + 0 ID=cds-WP_004217210.1;Parent=gene-NLI98_RS10345;Dbxref=Genbank:WP_004217210.1;Name=WP_004217210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227417.1;locus_tag=NLI98_RS10345;product=hypothetical protein;protein_id=WP_004217210.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2160229 2160387 . + . ID=gene-NLI98_RS10350;Name=NLI98_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10350;old_locus_tag=NLI98_10340 NZ_CP100601.1 Protein Homology CDS 2160229 2160387 . + 0 ID=cds-WP_162821832.1;Parent=gene-NLI98_RS10350;Dbxref=Genbank:WP_162821832.1;Name=WP_162821832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227416.1;locus_tag=NLI98_RS10350;product=hypothetical protein;protein_id=WP_162821832.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2160377 2160589 . + . ID=gene-NLI98_RS10355;Name=fumD;gbkey=Gene;gene=fumD;gene_biotype=protein_coding;locus_tag=NLI98_RS10355;old_locus_tag=NLI98_10345 NZ_CP100601.1 Protein Homology CDS 2160377 2160589 . + 0 ID=cds-WP_004180357.1;Parent=gene-NLI98_RS10355;Dbxref=Genbank:WP_004180357.1;Name=WP_004180357.1;gbkey=CDS;gene=fumD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227415.1;locus_tag=NLI98_RS10355;product=fumarate hydratase FumD;protein_id=WP_004180357.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2160607 2161245 . - . ID=gene-NLI98_RS10360;Name=NLI98_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10360;old_locus_tag=NLI98_10350 NZ_CP100601.1 Protein Homology CDS 2160607 2161245 . - 0 ID=cds-WP_002908844.1;Parent=gene-NLI98_RS10360;Dbxref=Genbank:WP_002908844.1;Name=WP_002908844.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227414.1;locus_tag=NLI98_RS10360;product=TetR family transcriptional regulator;protein_id=WP_002908844.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2161372 2163225 . + . ID=gene-NLI98_RS10365;Name=NLI98_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10365;old_locus_tag=NLI98_10355 NZ_CP100601.1 Protein Homology CDS 2161372 2163225 . + 0 ID=cds-WP_086519659.1;Parent=gene-NLI98_RS10365;Dbxref=Genbank:WP_086519659.1;Name=WP_086519659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227413.1;locus_tag=NLI98_RS10365;product=sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein;protein_id=WP_086519659.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2163297 2164619 . + . ID=gene-NLI98_RS10370;Name=NLI98_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10370;old_locus_tag=NLI98_10360 NZ_CP100601.1 Protein Homology CDS 2163297 2164619 . + 0 ID=cds-WP_004189496.1;Parent=gene-NLI98_RS10370;Dbxref=Genbank:WP_004189496.1;Name=WP_004189496.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227412.1;locus_tag=NLI98_RS10370;product=MFS transporter;protein_id=WP_004189496.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2164635 2165471 . + . ID=gene-NLI98_RS10375;Name=NLI98_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10375;old_locus_tag=NLI98_10365 NZ_CP100601.1 Protein Homology CDS 2164635 2165471 . + 0 ID=cds-WP_088498252.1;Parent=gene-NLI98_RS10375;Dbxref=Genbank:WP_088498252.1;Name=WP_088498252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227411.1;locus_tag=NLI98_RS10375;product=shikimate dehydrogenase;protein_id=WP_088498252.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2165528 2166271 . + . ID=gene-NLI98_RS10380;Name=NLI98_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10380;old_locus_tag=NLI98_10370 NZ_CP100601.1 Protein Homology CDS 2165528 2166271 . + 0 ID=cds-WP_004200243.1;Parent=gene-NLI98_RS10380;Dbxref=Genbank:WP_004200243.1;Name=WP_004200243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227410.1;locus_tag=NLI98_RS10380;product=substrate-binding domain-containing protein;protein_id=WP_004200243.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2166255 2167004 . - . ID=gene-NLI98_RS10385;Name=NLI98_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10385;old_locus_tag=NLI98_10375 NZ_CP100601.1 Protein Homology CDS 2166255 2167004 . - 0 ID=cds-WP_004151841.1;Parent=gene-NLI98_RS10385;Dbxref=Genbank:WP_004151841.1;Name=WP_004151841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227409.1;locus_tag=NLI98_RS10385;product=ABC transporter ATP-binding protein;protein_id=WP_004151841.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2167001 2168008 . - . ID=gene-NLI98_RS10390;Name=NLI98_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10390;old_locus_tag=NLI98_10380 NZ_CP100601.1 Protein Homology CDS 2167001 2168008 . - 0 ID=cds-WP_088498253.1;Parent=gene-NLI98_RS10390;Dbxref=Genbank:WP_088498253.1;Name=WP_088498253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227408.1;locus_tag=NLI98_RS10390;product=iron ABC transporter permease;protein_id=WP_088498253.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2167998 2169056 . - . ID=gene-NLI98_RS10395;Name=NLI98_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10395;old_locus_tag=NLI98_10385 NZ_CP100601.1 Protein Homology CDS 2167998 2169056 . - 0 ID=cds-WP_088498254.1;Parent=gene-NLI98_RS10395;Dbxref=Genbank:WP_088498254.1;Name=WP_088498254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227407.1;locus_tag=NLI98_RS10395;product=ABC transporter substrate-binding protein;protein_id=WP_088498254.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2169148 2169960 . - . ID=gene-NLI98_RS10400;Name=NLI98_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10400;old_locus_tag=NLI98_10390 NZ_CP100601.1 Protein Homology CDS 2169148 2169960 . - 0 ID=cds-WP_004200238.1;Parent=gene-NLI98_RS10400;Dbxref=Genbank:WP_004200238.1;Name=WP_004200238.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227406.1;locus_tag=NLI98_RS10400;product=DNA-binding transcriptional regulator;protein_id=WP_004200238.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2170138 2171802 . + . ID=gene-NLI98_RS10405;Name=NLI98_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10405;old_locus_tag=NLI98_10395 NZ_CP100601.1 Protein Homology CDS 2170138 2171802 . + 0 ID=cds-WP_088498255.1;Parent=gene-NLI98_RS10405;Dbxref=Genbank:WP_088498255.1;Name=WP_088498255.1;Ontology_term=GO:0019622,GO:0008688;gbkey=CDS;go_function=3-(3-hydroxyphenyl)propionate hydroxylase activity|0008688||IEA;go_process=3-(3-hydroxy)phenylpropionate catabolic process|0019622||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227405.1;locus_tag=NLI98_RS10405;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_088498255.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2171804 2172748 . + . ID=gene-NLI98_RS10410;Name=mhpB;gbkey=Gene;gene=mhpB;gene_biotype=protein_coding;locus_tag=NLI98_RS10410;old_locus_tag=NLI98_10400 NZ_CP100601.1 Protein Homology CDS 2171804 2172748 . + 0 ID=cds-WP_040242331.1;Parent=gene-NLI98_RS10410;Dbxref=Genbank:WP_040242331.1;Name=WP_040242331.1;Ontology_term=GO:0019439,GO:0047070;gbkey=CDS;gene=mhpB;go_function=3-carboxyethylcatechol 2%2C3-dioxygenase activity|0047070||IEA;go_process=aromatic compound catabolic process|0019439||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016947516.1;locus_tag=NLI98_RS10410;product=3-carboxyethylcatechol 2%2C3-dioxygenase;protein_id=WP_040242331.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2172766 2173632 . + . ID=gene-NLI98_RS10415;Name=NLI98_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10415;old_locus_tag=NLI98_10405 NZ_CP100601.1 Protein Homology CDS 2172766 2173632 . + 0 ID=cds-WP_004151837.1;Parent=gene-NLI98_RS10415;Dbxref=Genbank:WP_004151837.1;Name=WP_004151837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227402.1;locus_tag=NLI98_RS10415;product=alpha/beta fold hydrolase;protein_id=WP_004151837.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2173643 2174449 . + . ID=gene-NLI98_RS10420;Name=mhpD;gbkey=Gene;gene=mhpD;gene_biotype=protein_coding;locus_tag=NLI98_RS10420;old_locus_tag=NLI98_10410 NZ_CP100601.1 Protein Homology CDS 2173643 2174449 . + 0 ID=cds-WP_002908598.1;Parent=gene-NLI98_RS10420;Dbxref=Genbank:WP_002908598.1;Name=WP_002908598.1;Ontology_term=GO:0019439,GO:0008684,GO:0030145;gbkey=CDS;gene=mhpD;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA,manganese ion binding|0030145||IEA;go_process=aromatic compound catabolic process|0019439||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227401.1;locus_tag=NLI98_RS10420;product=2-keto-4-pentenoate hydratase;protein_id=WP_002908598.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2174442 2175392 . + . ID=gene-NLI98_RS10425;Name=NLI98_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10425;old_locus_tag=NLI98_10415 NZ_CP100601.1 Protein Homology CDS 2174442 2175392 . + 0 ID=cds-WP_086519655.1;Parent=gene-NLI98_RS10425;Dbxref=Genbank:WP_086519655.1;Name=WP_086519655.1;Ontology_term=GO:0008774;gbkey=CDS;go_function=acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227400.1;locus_tag=NLI98_RS10425;product=acetaldehyde dehydrogenase (acetylating);protein_id=WP_086519655.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2175389 2176405 . + . ID=gene-NLI98_RS10430;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=NLI98_RS10430;old_locus_tag=NLI98_10420 NZ_CP100601.1 Protein Homology CDS 2175389 2176405 . + 0 ID=cds-WP_071033320.1;Parent=gene-NLI98_RS10430;Dbxref=Genbank:WP_071033320.1;Name=WP_071033320.1;Ontology_term=GO:0008701;gbkey=CDS;gene=dmpG;go_function=4-hydroxy-2-oxovalerate aldolase activity|0008701||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705824.1;locus_tag=NLI98_RS10430;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_071033320.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2176481 2177677 . + . ID=gene-NLI98_RS10435;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=NLI98_RS10435;old_locus_tag=NLI98_10425 NZ_CP100601.1 Protein Homology CDS 2176481 2177677 . + 0 ID=cds-WP_004148691.1;Parent=gene-NLI98_RS10435;Dbxref=Genbank:WP_004148691.1;Name=WP_004148691.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mhpT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227398.1;locus_tag=NLI98_RS10435;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;protein_id=WP_004148691.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2177780 2178505 . + . ID=gene-NLI98_RS10440;Name=NLI98_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10440;old_locus_tag=NLI98_10430 NZ_CP100601.1 Protein Homology CDS 2177780 2178505 . + 0 ID=cds-WP_009307636.1;Parent=gene-NLI98_RS10440;Dbxref=Genbank:WP_009307636.1;Name=WP_009307636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227397.1;locus_tag=NLI98_RS10440;product=polyphenol oxidase family protein;protein_id=WP_009307636.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2178518 2180098 . - . ID=gene-NLI98_RS10445;Name=NLI98_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10445;old_locus_tag=NLI98_10435 NZ_CP100601.1 Protein Homology CDS 2178518 2180098 . - 0 ID=cds-WP_048337778.1;Parent=gene-NLI98_RS10445;Dbxref=Genbank:WP_048337778.1;Name=WP_048337778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227396.1;locus_tag=NLI98_RS10445;product=rhodanese homology domain-containing protein;protein_id=WP_048337778.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2180104 2180706 . - . ID=gene-NLI98_RS10450;Name=NLI98_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10450;old_locus_tag=NLI98_10440 NZ_CP100601.1 Protein Homology CDS 2180104 2180706 . - 0 ID=cds-WP_002908526.1;Parent=gene-NLI98_RS10450;Dbxref=Genbank:WP_002908526.1;Name=WP_002908526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189520.1;locus_tag=NLI98_RS10450;product=cysteine dioxygenase;protein_id=WP_002908526.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2180813 2181706 . + . ID=gene-NLI98_RS10455;Name=NLI98_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10455;old_locus_tag=NLI98_10445 NZ_CP100601.1 Protein Homology CDS 2180813 2181706 . + 0 ID=cds-WP_004175704.1;Parent=gene-NLI98_RS10455;Dbxref=Genbank:WP_004175704.1;Name=WP_004175704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227394.1;locus_tag=NLI98_RS10455;product=LysR family transcriptional regulator;protein_id=WP_004175704.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2181851 2182946 . + . ID=gene-NLI98_RS10460;Name=NLI98_RS10460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS10460;old_locus_tag=NLI98_10450;pseudo=true NZ_CP100601.1 Protein Homology CDS 2181851 2182946 . + 0 ID=cds-NLI98_RS10460;Parent=gene-NLI98_RS10460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227393.1;locus_tag=NLI98_RS10460;product=LLM class flavin-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2182933 2184084 . + . ID=gene-NLI98_RS10465;Name=NLI98_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10465;old_locus_tag=NLI98_10455 NZ_CP100601.1 Protein Homology CDS 2182933 2184084 . + 0 ID=cds-WP_048337776.1;Parent=gene-NLI98_RS10465;Dbxref=Genbank:WP_048337776.1;Name=WP_048337776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227392.1;locus_tag=NLI98_RS10465;product=acyl-CoA/acyl-ACP dehydrogenase;protein_id=WP_048337776.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2184090 2185052 . + . ID=gene-NLI98_RS10470;Name=NLI98_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10470;old_locus_tag=NLI98_10460 NZ_CP100601.1 Protein Homology CDS 2184090 2185052 . + 0 ID=cds-WP_009486099.1;Parent=gene-NLI98_RS10470;Dbxref=Genbank:WP_009486099.1;Name=WP_009486099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227391.1;locus_tag=NLI98_RS10470;product=ABC transporter substrate-binding protein;protein_id=WP_009486099.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2185049 2186086 . + . ID=gene-NLI98_RS10475;Name=NLI98_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10475;old_locus_tag=NLI98_10465 NZ_CP100601.1 Protein Homology CDS 2185049 2186086 . + 0 ID=cds-WP_004143325.1;Parent=gene-NLI98_RS10475;Dbxref=Genbank:WP_004143325.1;Name=WP_004143325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227390.1;locus_tag=NLI98_RS10475;product=ABC transporter substrate-binding protein;protein_id=WP_004143325.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2186067 2187062 . + . ID=gene-NLI98_RS10480;Name=NLI98_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10480;old_locus_tag=NLI98_10470 NZ_CP100601.1 Protein Homology CDS 2186067 2187062 . + 0 ID=cds-WP_004148681.1;Parent=gene-NLI98_RS10480;Dbxref=Genbank:WP_004148681.1;Name=WP_004148681.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227389.1;locus_tag=NLI98_RS10480;product=ABC transporter permease subunit;protein_id=WP_004148681.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2187056 2187829 . + . ID=gene-NLI98_RS10485;Name=NLI98_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10485;old_locus_tag=NLI98_10475 NZ_CP100601.1 Protein Homology CDS 2187056 2187829 . + 0 ID=cds-WP_002908439.1;Parent=gene-NLI98_RS10485;Dbxref=Genbank:WP_002908439.1;Name=WP_002908439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227388.1;locus_tag=NLI98_RS10485;product=ABC transporter ATP-binding protein;protein_id=WP_002908439.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2188057 2190129 . - . ID=gene-NLI98_RS10490;Name=NLI98_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10490;old_locus_tag=NLI98_10480 NZ_CP100601.1 Protein Homology CDS 2188057 2190129 . - 0 ID=cds-WP_004891261.1;Parent=gene-NLI98_RS10490;Dbxref=Genbank:WP_004891261.1;Name=WP_004891261.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227387.1;locus_tag=NLI98_RS10490;product=TonB-dependent siderophore receptor;protein_id=WP_004891261.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2190635 2191456 . + . ID=gene-NLI98_RS10495;Name=NLI98_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10495;old_locus_tag=NLI98_10485 NZ_CP100601.1 Protein Homology CDS 2190635 2191456 . + 0 ID=cds-WP_004143331.1;Parent=gene-NLI98_RS10495;Dbxref=Genbank:WP_004143331.1;Name=WP_004143331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227386.1;locus_tag=NLI98_RS10495;product=ABC transporter ATP-binding protein;protein_id=WP_004143331.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2191453 2192478 . + . ID=gene-NLI98_RS10500;Name=NLI98_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10500;old_locus_tag=NLI98_10490 NZ_CP100601.1 Protein Homology CDS 2191453 2192478 . + 0 ID=cds-WP_004189536.1;Parent=gene-NLI98_RS10500;Dbxref=Genbank:WP_004189536.1;Name=WP_004189536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227385.1;locus_tag=NLI98_RS10500;product=iron ABC transporter permease;protein_id=WP_004189536.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2192475 2193527 . + . ID=gene-NLI98_RS10505;Name=NLI98_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10505;old_locus_tag=NLI98_10495 NZ_CP100601.1 Protein Homology CDS 2192475 2193527 . + 0 ID=cds-WP_004200213.1;Parent=gene-NLI98_RS10505;Dbxref=Genbank:WP_004200213.1;Name=WP_004200213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004143336.1;locus_tag=NLI98_RS10505;product=iron ABC transporter permease;protein_id=WP_004200213.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2193517 2194494 . + . ID=gene-NLI98_RS10510;Name=NLI98_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10510;old_locus_tag=NLI98_10500 NZ_CP100601.1 Protein Homology CDS 2193517 2194494 . + 0 ID=cds-WP_074193543.1;Parent=gene-NLI98_RS10510;Dbxref=Genbank:WP_074193543.1;Name=WP_074193543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227383.1;locus_tag=NLI98_RS10510;product=ABC transporter substrate-binding protein;protein_id=WP_074193543.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2194460 2195393 . + . ID=gene-NLI98_RS10515;Name=NLI98_RS10515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS10515;old_locus_tag=NLI98_10505;pseudo=true NZ_CP100601.1 Protein Homology CDS 2194460 2195393 . + 0 ID=cds-NLI98_RS10515;Parent=gene-NLI98_RS10515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227382.1;locus_tag=NLI98_RS10515;product=MurR/RpiR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2195486 2196253 . + . ID=gene-NLI98_RS10520;Name=NLI98_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10520;old_locus_tag=NLI98_10510 NZ_CP100601.1 Protein Homology CDS 2195486 2196253 . + 0 ID=cds-WP_002908376.1;Parent=gene-NLI98_RS10520;Dbxref=Genbank:WP_002908376.1;Name=WP_002908376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227380.1;locus_tag=NLI98_RS10520;product=basic amino acid ABC transporter substrate-binding protein;protein_id=WP_002908376.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2196317 2197081 . + . ID=gene-NLI98_RS10525;Name=NLI98_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10525;old_locus_tag=NLI98_10515 NZ_CP100601.1 Protein Homology CDS 2196317 2197081 . + 0 ID=cds-WP_004151161.1;Parent=gene-NLI98_RS10525;Dbxref=Genbank:WP_004151161.1;Name=WP_004151161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227379.1;locus_tag=NLI98_RS10525;product=amino acid ABC transporter permease;protein_id=WP_004151161.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2197068 2197790 . + . ID=gene-NLI98_RS10530;Name=NLI98_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10530;old_locus_tag=NLI98_10520 NZ_CP100601.1 Protein Homology CDS 2197068 2197790 . + 0 ID=cds-WP_002908374.1;Parent=gene-NLI98_RS10530;Dbxref=Genbank:WP_002908374.1;Name=WP_002908374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227378.1;locus_tag=NLI98_RS10530;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002908374.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2198089 2198676 . + . ID=gene-NLI98_RS10535;Name=NLI98_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10535;old_locus_tag=NLI98_10525 NZ_CP100601.1 Protein Homology CDS 2198089 2198676 . + 0 ID=cds-WP_074193542.1;Parent=gene-NLI98_RS10535;Dbxref=Genbank:WP_074193542.1;Name=WP_074193542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227377.1;locus_tag=NLI98_RS10535;product=DUF1062 domain-containing protein;protein_id=WP_074193542.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2198805 2199197 . - . ID=gene-NLI98_RS10540;Name=NLI98_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10540;old_locus_tag=NLI98_10530 NZ_CP100601.1 Protein Homology CDS 2198805 2199197 . - 0 ID=cds-WP_004143365.1;Parent=gene-NLI98_RS10540;Dbxref=Genbank:WP_004143365.1;Name=WP_004143365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227376.1;locus_tag=NLI98_RS10540;product=VOC family protein;protein_id=WP_004143365.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2199234 2200466 . - . ID=gene-NLI98_RS10545;Name=NLI98_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10545;old_locus_tag=NLI98_10535 NZ_CP100601.1 Protein Homology CDS 2199234 2200466 . - 0 ID=cds-WP_002908368.1;Parent=gene-NLI98_RS10545;Dbxref=Genbank:WP_002908368.1;Name=WP_002908368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227375.1;locus_tag=NLI98_RS10545;product=multidrug efflux MFS transporter MdtM;protein_id=WP_002908368.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2201032 2201466 . - . ID=gene-NLI98_RS10550;Name=NLI98_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10550;old_locus_tag=NLI98_10540 NZ_CP100601.1 Protein Homology CDS 2201032 2201466 . - 0 ID=cds-WP_004180313.1;Parent=gene-NLI98_RS10550;Dbxref=Genbank:WP_004180313.1;Name=WP_004180313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227374.1;locus_tag=NLI98_RS10550;product=VOC family protein;protein_id=WP_004180313.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2201582 2202781 . - . ID=gene-NLI98_RS10555;Name=NLI98_RS10555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS10555;old_locus_tag=NLI98_10545;pseudo=true NZ_CP100601.1 Protein Homology CDS 2201582 2202781 . - 0 ID=cds-NLI98_RS10555;Parent=gene-NLI98_RS10555;Note=internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227373.1;locus_tag=NLI98_RS10555;product=MFS transporter;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2203077 2204234 . + . ID=gene-NLI98_RS10560;Name=NLI98_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10560;old_locus_tag=NLI98_10550 NZ_CP100601.1 Protein Homology CDS 2203077 2204234 . + 0 ID=cds-WP_064278913.1;Parent=gene-NLI98_RS10560;Dbxref=Genbank:WP_064278913.1;Name=WP_064278913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016161261.1;locus_tag=NLI98_RS10560;product=M20 family metallopeptidase;protein_id=WP_064278913.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2204277 2206427 . - . ID=gene-NLI98_RS10565;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=NLI98_RS10565;old_locus_tag=NLI98_10555 NZ_CP100601.1 Protein Homology CDS 2204277 2206427 . - 0 ID=cds-WP_019705846.1;Parent=gene-NLI98_RS10565;Dbxref=Genbank:WP_019705846.1;Name=WP_019705846.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004180308.1;locus_tag=NLI98_RS10565;product=formate dehydrogenase subunit alpha;protein_id=WP_019705846.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2206675 2207754 . - . ID=gene-NLI98_RS10570;Name=NLI98_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10570;old_locus_tag=NLI98_10560 NZ_CP100601.1 Protein Homology CDS 2206675 2207754 . - 0 ID=cds-WP_064278912.1;Parent=gene-NLI98_RS10570;Dbxref=Genbank:WP_064278912.1;Name=WP_064278912.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227369.1;locus_tag=NLI98_RS10570;product=malate/lactate/ureidoglycolate dehydrogenase;protein_id=WP_064278912.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2208057 2209145 . + . ID=gene-NLI98_RS10575;Name=NLI98_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10575;old_locus_tag=NLI98_10565 NZ_CP100601.1 Protein Homology CDS 2208057 2209145 . + 0 ID=cds-WP_086519650.1;Parent=gene-NLI98_RS10575;Dbxref=Genbank:WP_086519650.1;Name=WP_086519650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227367.1;locus_tag=NLI98_RS10575;product=ABC transporter substrate-binding protein;protein_id=WP_086519650.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2209219 2210988 . + . ID=gene-NLI98_RS10580;Name=NLI98_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10580;old_locus_tag=NLI98_10570 NZ_CP100601.1 Protein Homology CDS 2209219 2210988 . + 0 ID=cds-WP_002908294.1;Parent=gene-NLI98_RS10580;Dbxref=Genbank:WP_002908294.1;Name=WP_002908294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227366.1;locus_tag=NLI98_RS10580;product=iron ABC transporter permease;protein_id=WP_002908294.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2210981 2212051 . + . ID=gene-NLI98_RS10585;Name=NLI98_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10585;old_locus_tag=NLI98_10575 NZ_CP100601.1 Protein Homology CDS 2210981 2212051 . + 0 ID=cds-WP_004184356.1;Parent=gene-NLI98_RS10585;Dbxref=Genbank:WP_004184356.1;Name=WP_004184356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227365.1;locus_tag=NLI98_RS10585;product=ABC transporter ATP-binding protein;protein_id=WP_004184356.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2212473 2212892 . + . ID=gene-NLI98_RS10590;Name=NLI98_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10590;old_locus_tag=NLI98_10580 NZ_CP100601.1 Protein Homology CDS 2212473 2212892 . + 0 ID=cds-WP_223366854.1;Parent=gene-NLI98_RS10590;Dbxref=Genbank:WP_223366854.1;Name=WP_223366854.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027602.2;locus_tag=NLI98_RS10590;product=DUF4926 domain-containing protein;protein_id=WP_223366854.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2212918 2213133 . + . ID=gene-NLI98_RS10595;Name=NLI98_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10595;old_locus_tag=NLI98_10585 NZ_CP100601.1 Protein Homology CDS 2212918 2213133 . + 0 ID=cds-WP_023316239.1;Parent=gene-NLI98_RS10595;Dbxref=Genbank:WP_023316239.1;Name=WP_023316239.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038335.1;locus_tag=NLI98_RS10595;product=YrhA family protein;protein_id=WP_023316239.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2213194 2213565 . - . ID=gene-NLI98_RS10600;Name=NLI98_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10600;old_locus_tag=NLI98_10590 NZ_CP100601.1 Protein Homology CDS 2213194 2213565 . - 0 ID=cds-WP_064278910.1;Parent=gene-NLI98_RS10600;Dbxref=Genbank:WP_064278910.1;Name=WP_064278910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227364.1;locus_tag=NLI98_RS10600;product=VOC family protein;protein_id=WP_064278910.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2214066 2214821 . + . ID=gene-NLI98_RS10605;Name=NLI98_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10605;old_locus_tag=NLI98_10595 NZ_CP100601.1 Protein Homology CDS 2214066 2214821 . + 0 ID=cds-WP_004175724.1;Parent=gene-NLI98_RS10605;Dbxref=Genbank:WP_004175724.1;Name=WP_004175724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227363.1;locus_tag=NLI98_RS10605;product=gluconate 2-dehydrogenase subunit 3 family protein;protein_id=WP_004175724.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2214824 2216608 . + . ID=gene-NLI98_RS10610;Name=NLI98_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10610;old_locus_tag=NLI98_10600 NZ_CP100601.1 Protein Homology CDS 2214824 2216608 . + 0 ID=cds-WP_002908285.1;Parent=gene-NLI98_RS10610;Dbxref=Genbank:WP_002908285.1;Name=WP_002908285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227362.1;locus_tag=NLI98_RS10610;product=GMC family oxidoreductase;protein_id=WP_002908285.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2216619 2217959 . + . ID=gene-NLI98_RS10615;Name=NLI98_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10615;old_locus_tag=NLI98_10605 NZ_CP100601.1 Protein Homology CDS 2216619 2217959 . + 0 ID=cds-WP_074193541.1;Parent=gene-NLI98_RS10615;Dbxref=Genbank:WP_074193541.1;Name=WP_074193541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227361.1;locus_tag=NLI98_RS10615;product=cytochrome c;protein_id=WP_074193541.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2218043 2218666 . + . ID=gene-NLI98_RS10620;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=NLI98_RS10620;old_locus_tag=NLI98_10610 NZ_CP100601.1 Protein Homology CDS 2218043 2218666 . + 0 ID=cds-WP_086519649.1;Parent=gene-NLI98_RS10620;Dbxref=Genbank:WP_086519649.1;Name=WP_086519649.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227360.1;locus_tag=NLI98_RS10620;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_086519649.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2218663 2219322 . + . ID=gene-NLI98_RS10625;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=NLI98_RS10625;old_locus_tag=NLI98_10615 NZ_CP100601.1 Protein Homology CDS 2218663 2219322 . + 0 ID=cds-WP_048264575.1;Parent=gene-NLI98_RS10625;Dbxref=Genbank:WP_048264575.1;Name=WP_048264575.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227359.1;locus_tag=NLI98_RS10625;product=heme exporter protein CcmB;protein_id=WP_048264575.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2219372 2220109 . + . ID=gene-NLI98_RS10630;Name=NLI98_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10630;old_locus_tag=NLI98_10620 NZ_CP100601.1 Protein Homology CDS 2219372 2220109 . + 0 ID=cds-WP_002908223.1;Parent=gene-NLI98_RS10630;Dbxref=Genbank:WP_002908223.1;Name=WP_002908223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227358.1;locus_tag=NLI98_RS10630;product=heme ABC transporter permease;protein_id=WP_002908223.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2220106 2220336 . + . ID=gene-NLI98_RS10635;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=NLI98_RS10635;old_locus_tag=NLI98_10625 NZ_CP100601.1 Protein Homology CDS 2220106 2220336 . + 0 ID=cds-WP_004143390.1;Parent=gene-NLI98_RS10635;Dbxref=Genbank:WP_004143390.1;Name=WP_004143390.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227357.1;locus_tag=NLI98_RS10635;product=heme exporter protein CcmD;protein_id=WP_004143390.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2220320 2220778 . + . ID=gene-NLI98_RS10640;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=NLI98_RS10640;old_locus_tag=NLI98_10630 NZ_CP100601.1 Protein Homology CDS 2220320 2220778 . + 0 ID=cds-WP_004143391.1;Parent=gene-NLI98_RS10640;Dbxref=Genbank:WP_004143391.1;Name=WP_004143391.1;Ontology_term=GO:0017004,GO:0020037,GO:0005886;gbkey=CDS;gene=ccmE;go_component=plasma membrane|0005886||IEA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227356.1;locus_tag=NLI98_RS10640;product=cytochrome c maturation protein CcmE;protein_id=WP_004143391.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2220775 2222727 . + . ID=gene-NLI98_RS10645;Name=NLI98_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10645;old_locus_tag=NLI98_10635 NZ_CP100601.1 Protein Homology CDS 2220775 2222727 . + 0 ID=cds-WP_088498172.1;Parent=gene-NLI98_RS10645;Dbxref=Genbank:WP_088498172.1;Name=WP_088498172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227355.1;locus_tag=NLI98_RS10645;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_088498172.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2222724 2223278 . + . ID=gene-NLI98_RS10650;Name=NLI98_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10650;old_locus_tag=NLI98_10640 NZ_CP100601.1 Protein Homology CDS 2222724 2223278 . + 0 ID=cds-WP_004184329.1;Parent=gene-NLI98_RS10650;Dbxref=Genbank:WP_004184329.1;Name=WP_004184329.1;Ontology_term=GO:0017004,GO:0015036,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227354.1;locus_tag=NLI98_RS10650;product=DsbE family thiol:disulfide interchange protein;protein_id=WP_004184329.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2223290 2223736 . + . ID=gene-NLI98_RS10655;Name=NLI98_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10655;old_locus_tag=NLI98_10645 NZ_CP100601.1 Protein Homology CDS 2223290 2223736 . + 0 ID=cds-WP_004891317.1;Parent=gene-NLI98_RS10655;Dbxref=Genbank:WP_004891317.1;Name=WP_004891317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227353.1;locus_tag=NLI98_RS10655;product=cytochrome c-type biogenesis protein CcmH;protein_id=WP_004891317.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2223733 2224575 . + . ID=gene-NLI98_RS10660;Name=ccmI;gbkey=Gene;gene=ccmI;gene_biotype=protein_coding;locus_tag=NLI98_RS10660;old_locus_tag=NLI98_10650 NZ_CP100601.1 Protein Homology CDS 2223733 2224575 . + 0 ID=cds-WP_088498171.1;Parent=gene-NLI98_RS10660;Dbxref=Genbank:WP_088498171.1;Name=WP_088498171.1;Ontology_term=GO:0017004,GO:0051082;gbkey=CDS;gene=ccmI;go_function=unfolded protein binding|0051082||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202994.1;locus_tag=NLI98_RS10660;product=c-type cytochrome biogenesis protein CcmI;protein_id=WP_088498171.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2225794 2226342 . - . ID=gene-NLI98_RS10665;Name=NLI98_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10665;old_locus_tag=NLI98_10655 NZ_CP100601.1 Protein Homology CDS 2225794 2226342 . - 0 ID=cds-WP_048264753.1;Parent=gene-NLI98_RS10665;Dbxref=Genbank:WP_048264753.1;Name=WP_048264753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802931.1;locus_tag=NLI98_RS10665;product=hypothetical protein;protein_id=WP_048264753.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2226564 2227127 . - . ID=gene-NLI98_RS10670;Name=NLI98_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10670;old_locus_tag=NLI98_10660 NZ_CP100601.1 Protein Homology CDS 2226564 2227127 . - 0 ID=cds-WP_088498170.1;Parent=gene-NLI98_RS10670;Dbxref=Genbank:WP_088498170.1;Name=WP_088498170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004180262.1;locus_tag=NLI98_RS10670;product=GNAT family N-acetyltransferase;protein_id=WP_088498170.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2227430 2228200 . - . ID=gene-NLI98_RS10675;Name=NLI98_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10675;old_locus_tag=NLI98_10665 NZ_CP100601.1 Protein Homology CDS 2227430 2228200 . - 0 ID=cds-WP_004151179.1;Parent=gene-NLI98_RS10675;Dbxref=Genbank:WP_004151179.1;Name=WP_004151179.1;Ontology_term=GO:0045150,GO:0019152;gbkey=CDS;go_function=acetoin dehydrogenase activity|0019152||IEA;go_process=acetoin catabolic process|0045150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227341.1;locus_tag=NLI98_RS10675;product=(S)-acetoin forming diacetyl reductase;protein_id=WP_004151179.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2228224 2229903 . - . ID=gene-NLI98_RS10680;Name=alsS;gbkey=Gene;gene=alsS;gene_biotype=protein_coding;locus_tag=NLI98_RS10680;old_locus_tag=NLI98_10670 NZ_CP100601.1 Protein Homology CDS 2228224 2229903 . - 0 ID=cds-WP_004175750.1;Parent=gene-NLI98_RS10680;Dbxref=Genbank:WP_004175750.1;Name=WP_004175750.1;Ontology_term=GO:0006113,GO:0045151,GO:0003984;gbkey=CDS;gene=alsS;go_function=acetolactate synthase activity|0003984||IEA;go_process=fermentation|0006113||IEA,acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227340.1;locus_tag=NLI98_RS10680;product=acetolactate synthase AlsS;protein_id=WP_004175750.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2229913 2230692 . - . ID=gene-NLI98_RS10685;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=NLI98_RS10685;old_locus_tag=NLI98_10675 NZ_CP100601.1 Protein Homology CDS 2229913 2230692 . - 0 ID=cds-WP_002908205.1;Parent=gene-NLI98_RS10685;Dbxref=Genbank:WP_002908205.1;Name=WP_002908205.1;Ontology_term=GO:0006113,GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=fermentation|0006113||IEA,acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004180260.1;locus_tag=NLI98_RS10685;product=acetolactate decarboxylase;protein_id=WP_002908205.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2230799 2231671 . + . ID=gene-NLI98_RS10690;Name=NLI98_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10690;old_locus_tag=NLI98_10680 NZ_CP100601.1 Protein Homology CDS 2230799 2231671 . + 0 ID=cds-WP_004145376.1;Parent=gene-NLI98_RS10690;Dbxref=Genbank:WP_004145376.1;Name=WP_004145376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227338.1;locus_tag=NLI98_RS10690;product=LysR family transcriptional regulator;protein_id=WP_004145376.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2231691 2232461 . - . ID=gene-NLI98_RS10695;Name=NLI98_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10695;old_locus_tag=NLI98_10685 NZ_CP100601.1 Protein Homology CDS 2231691 2232461 . - 0 ID=cds-WP_002908202.1;Parent=gene-NLI98_RS10695;Dbxref=Genbank:WP_002908202.1;Name=WP_002908202.1;Ontology_term=GO:0003858;gbkey=CDS;go_function=3-hydroxybutyrate dehydrogenase activity|0003858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227337.1;locus_tag=NLI98_RS10695;product=3-hydroxybutyrate dehydrogenase;protein_id=WP_002908202.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2232485 2233879 . - . ID=gene-NLI98_RS10700;Name=NLI98_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10700;old_locus_tag=NLI98_10690 NZ_CP100601.1 Protein Homology CDS 2232485 2233879 . - 0 ID=cds-WP_197985801.1;Parent=gene-NLI98_RS10700;Dbxref=Genbank:WP_197985801.1;Name=WP_197985801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227336.1;locus_tag=NLI98_RS10700;product=GntP family permease;protein_id=WP_197985801.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2233924 2234847 . - . ID=gene-NLI98_RS10705;Name=NLI98_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10705;old_locus_tag=NLI98_10695 NZ_CP100601.1 Protein Homology CDS 2233924 2234847 . - 0 ID=cds-WP_004891326.1;Parent=gene-NLI98_RS10705;Dbxref=Genbank:WP_004891326.1;Name=WP_004891326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227335.1;locus_tag=NLI98_RS10705;product=3-hydroxyacyl-CoA dehydrogenase family protein;protein_id=WP_004891326.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2234859 2236040 . - . ID=gene-NLI98_RS10710;Name=NLI98_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10710;old_locus_tag=NLI98_10700 NZ_CP100601.1 Protein Homology CDS 2234859 2236040 . - 0 ID=cds-WP_023282681.1;Parent=gene-NLI98_RS10710;Dbxref=Genbank:WP_023282681.1;Name=WP_023282681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804552.1;locus_tag=NLI98_RS10710;product=acetyl-CoA C-acetyltransferase;protein_id=WP_023282681.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2236050 2236706 . - . ID=gene-NLI98_RS10715;Name=NLI98_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10715;old_locus_tag=NLI98_10705 NZ_CP100601.1 Protein Homology CDS 2236050 2236706 . - 0 ID=cds-WP_002908192.1;Parent=gene-NLI98_RS10715;Dbxref=Genbank:WP_002908192.1;Name=WP_002908192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227332.1;locus_tag=NLI98_RS10715;product=CoA transferase subunit B;protein_id=WP_002908192.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2236708 2237415 . - . ID=gene-NLI98_RS10720;Name=NLI98_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10720;old_locus_tag=NLI98_10710 NZ_CP100601.1 Protein Homology CDS 2236708 2237415 . - 0 ID=cds-WP_004175762.1;Parent=gene-NLI98_RS10720;Dbxref=Genbank:WP_004175762.1;Name=WP_004175762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227331.1;locus_tag=NLI98_RS10720;product=CoA transferase subunit A;protein_id=WP_004175762.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2237556 2238446 . + . ID=gene-NLI98_RS10725;Name=NLI98_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10725;old_locus_tag=NLI98_10715 NZ_CP100601.1 Protein Homology CDS 2237556 2238446 . + 0 ID=cds-WP_004180250.1;Parent=gene-NLI98_RS10725;Dbxref=Genbank:WP_004180250.1;Name=WP_004180250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227330.1;locus_tag=NLI98_RS10725;product=LysR family transcriptional regulator;protein_id=WP_004180250.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2238491 2238631 . - . ID=gene-NLI98_RS10730;Name=NLI98_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10730;old_locus_tag=NLI98_10720 NZ_CP100601.1 Protein Homology CDS 2238491 2238631 . - 0 ID=cds-WP_002908189.1;Parent=gene-NLI98_RS10730;Dbxref=Genbank:WP_002908189.1;Name=WP_002908189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227329.1;locus_tag=NLI98_RS10730;product=hypothetical protein;protein_id=WP_002908189.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2238921 2239829 . + . ID=gene-NLI98_RS10735;Name=NLI98_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10735;old_locus_tag=NLI98_10725 NZ_CP100601.1 Protein Homology CDS 2238921 2239829 . + 0 ID=cds-WP_004145368.1;Parent=gene-NLI98_RS10735;Dbxref=Genbank:WP_004145368.1;Name=WP_004145368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004180248.1;locus_tag=NLI98_RS10735;product=DUF535 family protein;protein_id=WP_004145368.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2239995 2240273 . - . ID=gene-NLI98_RS10740;Name=NLI98_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10740;old_locus_tag=NLI98_10730 NZ_CP100601.1 Protein Homology CDS 2239995 2240273 . - 0 ID=cds-WP_002908185.1;Parent=gene-NLI98_RS10740;Dbxref=Genbank:WP_002908185.1;Name=WP_002908185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002908185.1;locus_tag=NLI98_RS10740;product=hypothetical protein;protein_id=WP_002908185.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2240179 2240666 . + . ID=gene-NLI98_RS10745;Name=NLI98_RS10745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS10745;old_locus_tag=NLI98_10735;partial=true;pseudo=true;start_range=.,2240179 NZ_CP100601.1 Protein Homology CDS 2240179 2240666 . + 0 ID=cds-NLI98_RS10745;Parent=gene-NLI98_RS10745;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016161235.1;locus_tag=NLI98_RS10745;partial=true;product=chromate transporter;pseudo=true;start_range=.,2240179;transl_table=11 NZ_CP100601.1 RefSeq gene 2240721 2242142 . - . ID=gene-NLI98_RS10750;Name=NLI98_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10750;old_locus_tag=NLI98_10740 NZ_CP100601.1 Protein Homology CDS 2240721 2242142 . - 0 ID=cds-WP_171878433.1;Parent=gene-NLI98_RS10750;Dbxref=Genbank:WP_171878433.1;Name=WP_171878433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227325.1;locus_tag=NLI98_RS10750;product=FAD-binding oxidoreductase;protein_id=WP_171878433.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2242169 2242984 . - . ID=gene-NLI98_RS10755;Name=NLI98_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10755;old_locus_tag=NLI98_10745 NZ_CP100601.1 Protein Homology CDS 2242169 2242984 . - 0 ID=cds-WP_048264568.1;Parent=gene-NLI98_RS10755;Dbxref=Genbank:WP_048264568.1;Name=WP_048264568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227324.1;locus_tag=NLI98_RS10755;product=ABC transporter permease;protein_id=WP_048264568.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2242986 2243816 . - . ID=gene-NLI98_RS10760;Name=NLI98_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10760;old_locus_tag=NLI98_10750 NZ_CP100601.1 Protein Homology CDS 2242986 2243816 . - 0 ID=cds-WP_004180245.1;Parent=gene-NLI98_RS10760;Dbxref=Genbank:WP_004180245.1;Name=WP_004180245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227323.1;locus_tag=NLI98_RS10760;product=ABC transporter ATP-binding protein;protein_id=WP_004180245.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2243813 2244796 . - . ID=gene-NLI98_RS10765;Name=NLI98_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10765;old_locus_tag=NLI98_10755 NZ_CP100601.1 Protein Homology CDS 2243813 2244796 . - 0 ID=cds-WP_088498167.1;Parent=gene-NLI98_RS10765;Dbxref=Genbank:WP_088498167.1;Name=WP_088498167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227322.1;locus_tag=NLI98_RS10765;product=ABC transporter substrate-binding protein;protein_id=WP_088498167.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2244796 2245677 . - . ID=gene-NLI98_RS10770;Name=NLI98_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10770;old_locus_tag=NLI98_10760 NZ_CP100601.1 Protein Homology CDS 2244796 2245677 . - 0 ID=cds-WP_088498166.1;Parent=gene-NLI98_RS10770;Dbxref=Genbank:WP_088498166.1;Name=WP_088498166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227321.1;locus_tag=NLI98_RS10770;product=creatininase family protein;protein_id=WP_088498166.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2245674 2246153 . - . ID=gene-NLI98_RS10775;Name=NLI98_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10775;old_locus_tag=NLI98_10765 NZ_CP100601.1 Protein Homology CDS 2245674 2246153 . - 0 ID=cds-WP_002908128.1;Parent=gene-NLI98_RS10775;Dbxref=Genbank:WP_002908128.1;Name=WP_002908128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227320.1;locus_tag=NLI98_RS10775;product=RidA family protein;protein_id=WP_002908128.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2246143 2247412 . - . ID=gene-NLI98_RS10780;Name=NLI98_RS10780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS10780;old_locus_tag=NLI98_10770;pseudo=true NZ_CP100601.1 Protein Homology CDS 2246143 2247412 . - 0 ID=cds-NLI98_RS10780;Parent=gene-NLI98_RS10780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227319.1;locus_tag=NLI98_RS10780;product=amidohydrolase family protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2247424 2248392 . - . ID=gene-NLI98_RS10785;Name=NLI98_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10785;old_locus_tag=NLI98_10775 NZ_CP100601.1 Protein Homology CDS 2247424 2248392 . - 0 ID=cds-WP_009486386.1;Parent=gene-NLI98_RS10785;Dbxref=Genbank:WP_009486386.1;Name=WP_009486386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227318.1;locus_tag=NLI98_RS10785;product=PDR/VanB family oxidoreductase;protein_id=WP_009486386.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2248600 2249499 . + . ID=gene-NLI98_RS10790;Name=NLI98_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10790;old_locus_tag=NLI98_10780 NZ_CP100601.1 Protein Homology CDS 2248600 2249499 . + 0 ID=cds-WP_002908057.1;Parent=gene-NLI98_RS10790;Dbxref=Genbank:WP_002908057.1;Name=WP_002908057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227317.1;locus_tag=NLI98_RS10790;product=LysR family transcriptional regulator;protein_id=WP_002908057.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2249794 2250783 . + . ID=gene-NLI98_RS10795;Name=NLI98_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10795;old_locus_tag=NLI98_10785 NZ_CP100601.1 Protein Homology CDS 2249794 2250783 . + 0 ID=cds-WP_032446146.1;Parent=gene-NLI98_RS10795;Dbxref=Genbank:WP_032446146.1;Name=WP_032446146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227316.1;locus_tag=NLI98_RS10795;product=ABC transporter substrate-binding protein;protein_id=WP_032446146.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2250795 2252213 . + . ID=gene-NLI98_RS10800;Name=NLI98_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10800;old_locus_tag=NLI98_10790 NZ_CP100601.1 Protein Homology CDS 2250795 2252213 . + 0 ID=cds-WP_032446145.1;Parent=gene-NLI98_RS10800;Dbxref=Genbank:WP_032446145.1;Name=WP_032446145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227315.1;locus_tag=NLI98_RS10800;product=amidohydrolase family protein;protein_id=WP_032446145.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2252234 2253223 . + . ID=gene-NLI98_RS10805;Name=NLI98_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10805;old_locus_tag=NLI98_10795 NZ_CP100601.1 Protein Homology CDS 2252234 2253223 . + 0 ID=cds-WP_088498164.1;Parent=gene-NLI98_RS10805;Dbxref=Genbank:WP_088498164.1;Name=WP_088498164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227314.1;locus_tag=NLI98_RS10805;product=isopenicillin N synthase family oxygenase;protein_id=WP_088498164.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2253489 2253821 . - . ID=gene-NLI98_RS10810;Name=NLI98_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10810;old_locus_tag=NLI98_10800 NZ_CP100601.1 Protein Homology CDS 2253489 2253821 . - 0 ID=cds-WP_004216888.1;Parent=gene-NLI98_RS10810;Dbxref=Genbank:WP_004216888.1;Name=WP_004216888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004216888.1;locus_tag=NLI98_RS10810;product=hypothetical protein;protein_id=WP_004216888.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2253987 2254793 . - . ID=gene-NLI98_RS10815;Name=NLI98_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10815;old_locus_tag=NLI98_10805 NZ_CP100601.1 Protein Homology CDS 2253987 2254793 . - 0 ID=cds-WP_171878432.1;Parent=gene-NLI98_RS10815;Dbxref=Genbank:WP_171878432.1;Name=WP_171878432.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024260.2;locus_tag=NLI98_RS10815;product=AraC family transcriptional regulator;protein_id=WP_171878432.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2255028 2255516 . + . ID=gene-NLI98_RS10820;Name=NLI98_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10820;old_locus_tag=NLI98_10810 NZ_CP100601.1 Protein Homology CDS 2255028 2255516 . + 0 ID=cds-WP_004215697.1;Parent=gene-NLI98_RS10820;Dbxref=Genbank:WP_004215697.1;Name=WP_004215697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004215697.1;locus_tag=NLI98_RS10820;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_004215697.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2255534 2256298 . - . ID=gene-NLI98_RS10825;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=NLI98_RS10825;old_locus_tag=NLI98_10815 NZ_CP100601.1 Protein Homology CDS 2255534 2256298 . - 0 ID=cds-WP_004180232.1;Parent=gene-NLI98_RS10825;Dbxref=Genbank:WP_004180232.1;Name=WP_004180232.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004180232.1;locus_tag=NLI98_RS10825;product=5'/3'-nucleotidase SurE;protein_id=WP_004180232.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2256401 2257909 . + . ID=gene-NLI98_RS10830;Name=NLI98_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10830;old_locus_tag=NLI98_10820 NZ_CP100601.1 Protein Homology CDS 2256401 2257909 . + 0 ID=cds-WP_082228823.1;Parent=gene-NLI98_RS10830;Dbxref=Genbank:WP_082228823.1;Name=WP_082228823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004180230.1;locus_tag=NLI98_RS10830;product=EAL domain-containing protein;protein_id=WP_082228823.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2258135 2258917 . - . ID=gene-NLI98_RS10835;Name=NLI98_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10835;old_locus_tag=NLI98_10825 NZ_CP100601.1 Protein Homology CDS 2258135 2258917 . - 0 ID=cds-WP_004196404.1;Parent=gene-NLI98_RS10835;Dbxref=Genbank:WP_004196404.1;Name=WP_004196404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004180228.1;locus_tag=NLI98_RS10835;product=MipA/OmpV family protein;protein_id=WP_004196404.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2259042 2259740 . + . ID=gene-NLI98_RS10840;Name=NLI98_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10840;old_locus_tag=NLI98_10830 NZ_CP100601.1 Protein Homology CDS 2259042 2259740 . + 0 ID=cds-WP_004180227.1;Parent=gene-NLI98_RS10840;Dbxref=Genbank:WP_004180227.1;Name=WP_004180227.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096847.1;locus_tag=NLI98_RS10840;product=response regulator;protein_id=WP_004180227.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2259737 2260909 . + . ID=gene-NLI98_RS10845;Name=NLI98_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10845;old_locus_tag=NLI98_10835 NZ_CP100601.1 Protein Homology CDS 2259737 2260909 . + 0 ID=cds-WP_004180226.1;Parent=gene-NLI98_RS10845;Dbxref=Genbank:WP_004180226.1;Name=WP_004180226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004180226.1;locus_tag=NLI98_RS10845;product=ATP-binding protein;protein_id=WP_004180226.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2261008 2262177 . + . ID=gene-NLI98_RS10850;Name=NLI98_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10850;old_locus_tag=NLI98_10840 NZ_CP100601.1 Protein Homology CDS 2261008 2262177 . + 0 ID=cds-WP_088498284.1;Parent=gene-NLI98_RS10850;Dbxref=Genbank:WP_088498284.1;Name=WP_088498284.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004215687.1;locus_tag=NLI98_RS10850;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_088498284.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2262161 2265247 . + . ID=gene-NLI98_RS10855;Name=NLI98_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10855;old_locus_tag=NLI98_10845 NZ_CP100601.1 Protein Homology CDS 2262161 2265247 . + 0 ID=cds-WP_088498283.1;Parent=gene-NLI98_RS10855;Dbxref=Genbank:WP_088498283.1;Name=WP_088498283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705762.1;locus_tag=NLI98_RS10855;product=efflux RND transporter permease subunit;protein_id=WP_088498283.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2265303 2265629 . + . ID=gene-NLI98_RS10860;Name=NLI98_RS10860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS10860;old_locus_tag=NLI98_10850;partial=true;pseudo=true;start_range=.,2265303 NZ_CP100601.1 Protein Homology CDS 2265303 2265629 . + 0 ID=cds-NLI98_RS10860;Parent=gene-NLI98_RS10860;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006974,GO:0018142,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=cellular response to DNA damage stimulus|0006974||IEA,protein-DNA covalent cross-linking|0018142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804661.1;locus_tag=NLI98_RS10860;partial=true;product=SOS response-associated peptidase family protein;pseudo=true;start_range=.,2265303;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2266079 2267242 . + . ID=gene-NLI98_RS10865;Name=NLI98_RS10865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS10865;old_locus_tag=NLI98_10855;pseudo=true NZ_CP100601.1 Protein Homology CDS 2266079 2267242 . + 0 ID=cds-NLI98_RS10865;Parent=gene-NLI98_RS10865;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477168.1;locus_tag=NLI98_RS10865;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2267549 2268485 . - . ID=gene-NLI98_RS10870;Name=NLI98_RS10870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS10870;old_locus_tag=NLI98_10860;pseudo=true NZ_CP100601.1 Protein Homology CDS 2267549 2268485 . - 0 ID=cds-NLI98_RS10870;Parent=gene-NLI98_RS10870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227310.1;locus_tag=NLI98_RS10870;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2268602 2270134 . + . ID=gene-NLI98_RS10875;Name=NLI98_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10875;old_locus_tag=NLI98_10865 NZ_CP100601.1 Protein Homology CDS 2268602 2270134 . + 0 ID=cds-WP_088498281.1;Parent=gene-NLI98_RS10875;Dbxref=Genbank:WP_088498281.1;Name=WP_088498281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151190.1;locus_tag=NLI98_RS10875;product=MFS transporter;protein_id=WP_088498281.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2270344 2270577 . + . ID=gene-NLI98_RS10880;Name=NLI98_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10880;old_locus_tag=NLI98_10870 NZ_CP100601.1 Protein Homology CDS 2270344 2270577 . + 0 ID=cds-WP_004898659.1;Parent=gene-NLI98_RS10880;Dbxref=Genbank:WP_004898659.1;Name=WP_004898659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004898659.1;locus_tag=NLI98_RS10880;product=hypothetical protein;protein_id=WP_004898659.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2270614 2271101 . - . ID=gene-NLI98_RS10885;Name=NLI98_RS10885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS10885;old_locus_tag=NLI98_10875;pseudo=true NZ_CP100601.1 Protein Homology CDS 2270614 2271101 . - 0 ID=cds-NLI98_RS10885;Parent=gene-NLI98_RS10885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227306.1;locus_tag=NLI98_RS10885;product=DinB family protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2271219 2271746 . - . ID=gene-NLI98_RS10890;Name=NLI98_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10890;old_locus_tag=NLI98_10880 NZ_CP100601.1 Protein Homology CDS 2271219 2271746 . - 0 ID=cds-WP_002907918.1;Parent=gene-NLI98_RS10890;Dbxref=Genbank:WP_002907918.1;Name=WP_002907918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227305.1;locus_tag=NLI98_RS10890;product=anti-virulence regulator CigR family protein;protein_id=WP_002907918.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2272112 2273083 . - . ID=gene-NLI98_RS10895;Name=NLI98_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10895;old_locus_tag=NLI98_10885 NZ_CP100601.1 Protein Homology CDS 2272112 2273083 . - 0 ID=cds-WP_009307691.1;Parent=gene-NLI98_RS10895;Dbxref=Genbank:WP_009307691.1;Name=WP_009307691.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227304.1;locus_tag=NLI98_RS10895;product=ATP-binding cassette domain-containing protein;protein_id=WP_009307691.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2273080 2274060 . - . ID=gene-NLI98_RS10900;Name=NLI98_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10900;old_locus_tag=NLI98_10890 NZ_CP100601.1 Protein Homology CDS 2273080 2274060 . - 0 ID=cds-WP_004151192.1;Parent=gene-NLI98_RS10900;Dbxref=Genbank:WP_004151192.1;Name=WP_004151192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227303.1;locus_tag=NLI98_RS10900;product=ABC transporter ATP-binding protein;protein_id=WP_004151192.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2274057 2275007 . - . ID=gene-NLI98_RS10905;Name=NLI98_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10905;old_locus_tag=NLI98_10895 NZ_CP100601.1 Protein Homology CDS 2274057 2275007 . - 0 ID=cds-WP_172676877.1;Parent=gene-NLI98_RS10905;Dbxref=Genbank:WP_172676877.1;Name=WP_172676877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227302.1;locus_tag=NLI98_RS10905;product=ABC transporter permease;protein_id=WP_172676877.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2275004 2275963 . - . ID=gene-NLI98_RS10910;Name=NLI98_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10910;old_locus_tag=NLI98_10900 NZ_CP100601.1 Protein Homology CDS 2275004 2275963 . - 0 ID=cds-WP_032420134.1;Parent=gene-NLI98_RS10910;Dbxref=Genbank:WP_032420134.1;Name=WP_032420134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227301.1;locus_tag=NLI98_RS10910;product=ABC transporter permease;protein_id=WP_032420134.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2276007 2277710 . - . ID=gene-NLI98_RS10915;Name=NLI98_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10915;old_locus_tag=NLI98_10905 NZ_CP100601.1 Protein Homology CDS 2276007 2277710 . - 0 ID=cds-WP_088498280.1;Parent=gene-NLI98_RS10915;Dbxref=Genbank:WP_088498280.1;Name=WP_088498280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227300.1;locus_tag=NLI98_RS10915;product=ABC transporter substrate-binding protein;protein_id=WP_088498280.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2278055 2278738 . - . ID=gene-NLI98_RS10920;Name=NLI98_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10920;old_locus_tag=NLI98_10910 NZ_CP100601.1 Protein Homology CDS 2278055 2278738 . - 0 ID=cds-WP_032418885.1;Parent=gene-NLI98_RS10920;Dbxref=Genbank:WP_032418885.1;Name=WP_032418885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227299.1;locus_tag=NLI98_RS10920;product=CatA-like O-acetyltransferase%2C family 1;protein_id=WP_032418885.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2278770 2279153 . - . ID=gene-NLI98_RS10925;Name=NLI98_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10925;old_locus_tag=NLI98_10915 NZ_CP100601.1 Protein Homology CDS 2278770 2279153 . - 0 ID=cds-WP_014907474.1;Parent=gene-NLI98_RS10925;Dbxref=Genbank:WP_014907474.1;Name=WP_014907474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227298.1;locus_tag=NLI98_RS10925;product=VOC family protein;protein_id=WP_014907474.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2279245 2280015 . + . ID=gene-NLI98_RS10930;Name=NLI98_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10930;old_locus_tag=NLI98_10920 NZ_CP100601.1 Protein Homology CDS 2279245 2280015 . + 0 ID=cds-WP_004184291.1;Parent=gene-NLI98_RS10930;Dbxref=Genbank:WP_004184291.1;Name=WP_004184291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227297.1;locus_tag=NLI98_RS10930;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_004184291.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2280020 2280649 . - . ID=gene-NLI98_RS10935;Name=NLI98_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10935;old_locus_tag=NLI98_10925 NZ_CP100601.1 Protein Homology CDS 2280020 2280649 . - 0 ID=cds-WP_002907812.1;Parent=gene-NLI98_RS10935;Dbxref=Genbank:WP_002907812.1;Name=WP_002907812.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227296.1;locus_tag=NLI98_RS10935;product=LysE family transporter;protein_id=WP_002907812.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2280899 2281534 . + . ID=gene-NLI98_RS10940;Name=NLI98_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10940;old_locus_tag=NLI98_10930 NZ_CP100601.1 Protein Homology CDS 2280899 2281534 . + 0 ID=cds-WP_002907811.1;Parent=gene-NLI98_RS10940;Dbxref=Genbank:WP_002907811.1;Name=WP_002907811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227295.1;locus_tag=NLI98_RS10940;product=carbonic anhydrase;protein_id=WP_002907811.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2281847 2282056 . - . ID=gene-NLI98_RS10945;Name=NLI98_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10945;old_locus_tag=NLI98_10935 NZ_CP100601.1 Protein Homology CDS 2281847 2282056 . - 0 ID=cds-WP_032434654.1;Parent=gene-NLI98_RS10945;Dbxref=Genbank:WP_032434654.1;Name=WP_032434654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227293.1;locus_tag=NLI98_RS10945;product=DUF1471 domain-containing protein;protein_id=WP_032434654.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2282141 2282857 . - . ID=gene-NLI98_RS10950;Name=NLI98_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10950;old_locus_tag=NLI98_10940 NZ_CP100601.1 Protein Homology CDS 2282141 2282857 . - 0 ID=cds-WP_021312452.1;Parent=gene-NLI98_RS10950;Dbxref=Genbank:WP_021312452.1;Name=WP_021312452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227292.1;locus_tag=NLI98_RS10950;product=hypothetical protein;protein_id=WP_021312452.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2282903 2283337 . - . ID=gene-NLI98_RS10955;Name=NLI98_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10955;old_locus_tag=NLI98_10945 NZ_CP100601.1 Protein Homology CDS 2282903 2283337 . - 0 ID=cds-WP_004143863.1;Parent=gene-NLI98_RS10955;Dbxref=Genbank:WP_004143863.1;Name=WP_004143863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227291.1;locus_tag=NLI98_RS10955;product=helix-turn-helix domain-containing protein;protein_id=WP_004143863.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2283739 2283888 . + . ID=gene-NLI98_RS10960;Name=NLI98_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10960;old_locus_tag=NLI98_10950 NZ_CP100601.1 Protein Homology CDS 2283739 2283888 . + 0 ID=cds-WP_002907802.1;Parent=gene-NLI98_RS10960;Dbxref=Genbank:WP_002907802.1;Name=WP_002907802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227290.1;locus_tag=NLI98_RS10960;product=hypothetical protein;protein_id=WP_002907802.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2283976 2284812 . - . ID=gene-NLI98_RS10965;Name=NLI98_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10965;old_locus_tag=NLI98_10955 NZ_CP100601.1 Protein Homology CDS 2283976 2284812 . - 0 ID=cds-WP_064278902.1;Parent=gene-NLI98_RS10965;Dbxref=Genbank:WP_064278902.1;Name=WP_064278902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227289.1;locus_tag=NLI98_RS10965;product=MBL fold metallo-hydrolase;protein_id=WP_064278902.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2284820 2285335 . - . ID=gene-NLI98_RS10970;Name=NLI98_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10970;old_locus_tag=NLI98_10960 NZ_CP100601.1 Protein Homology CDS 2284820 2285335 . - 0 ID=cds-WP_064278901.1;Parent=gene-NLI98_RS10970;Dbxref=Genbank:WP_064278901.1;Name=WP_064278901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227288.1;locus_tag=NLI98_RS10970;product=hypothetical protein;protein_id=WP_064278901.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2285492 2286376 . + . ID=gene-NLI98_RS10975;Name=NLI98_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10975;old_locus_tag=NLI98_10965 NZ_CP100601.1 Protein Homology CDS 2285492 2286376 . + 0 ID=cds-WP_002907799.1;Parent=gene-NLI98_RS10975;Dbxref=Genbank:WP_002907799.1;Name=WP_002907799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227287.1;locus_tag=NLI98_RS10975;product=LysR substrate-binding domain-containing protein;protein_id=WP_002907799.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2286901 2287191 . + . ID=gene-NLI98_RS10980;Name=NLI98_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10980;old_locus_tag=NLI98_10970 NZ_CP100601.1 Protein Homology CDS 2286901 2287191 . + 0 ID=cds-WP_038435383.1;Parent=gene-NLI98_RS10980;Dbxref=Genbank:WP_038435383.1;Name=WP_038435383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004898633.1;locus_tag=NLI98_RS10980;product=hypothetical protein;protein_id=WP_038435383.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2287358 2287585 . + . ID=gene-NLI98_RS10985;Name=NLI98_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS10985;old_locus_tag=NLI98_10975 NZ_CP100601.1 Protein Homology CDS 2287358 2287585 . + 0 ID=cds-WP_077253507.1;Parent=gene-NLI98_RS10985;Dbxref=Genbank:WP_077253507.1;Name=WP_077253507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015874864.1;locus_tag=NLI98_RS10985;product=hypothetical protein;protein_id=WP_077253507.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2287772 2287848 . - . ID=gene-NLI98_RS10990;Name=NLI98_RS10990;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS10990;old_locus_tag=NLI98_10980 NZ_CP100601.1 tRNAscan-SE tRNA 2287772 2287848 . - . ID=rna-NLI98_RS10990;Parent=gene-NLI98_RS10990;anticodon=(pos:complement(2287812..2287814));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS10990;product=tRNA-Val NZ_CP100601.1 tRNAscan-SE exon 2287772 2287848 . - . ID=exon-NLI98_RS10990-1;Parent=rna-NLI98_RS10990;anticodon=(pos:complement(2287812..2287814));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS10990;product=tRNA-Val NZ_CP100601.1 RefSeq gene 2287853 2287929 . - . ID=gene-NLI98_RS10995;Name=NLI98_RS10995;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS10995;old_locus_tag=NLI98_10985 NZ_CP100601.1 tRNAscan-SE tRNA 2287853 2287929 . - . ID=rna-NLI98_RS10995;Parent=gene-NLI98_RS10995;anticodon=(pos:complement(2287893..2287895));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS10995;product=tRNA-Val NZ_CP100601.1 tRNAscan-SE exon 2287853 2287929 . - . ID=exon-NLI98_RS10995-1;Parent=rna-NLI98_RS10995;anticodon=(pos:complement(2287893..2287895));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS10995;product=tRNA-Val NZ_CP100601.1 RefSeq gene 2287934 2288010 . - . ID=gene-NLI98_RS11000;Name=NLI98_RS11000;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS11000;old_locus_tag=NLI98_10990 NZ_CP100601.1 tRNAscan-SE tRNA 2287934 2288010 . - . ID=rna-NLI98_RS11000;Parent=gene-NLI98_RS11000;anticodon=(pos:complement(2287974..2287976));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS11000;product=tRNA-Val NZ_CP100601.1 tRNAscan-SE exon 2287934 2288010 . - . ID=exon-NLI98_RS11000-1;Parent=rna-NLI98_RS11000;anticodon=(pos:complement(2287974..2287976));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS11000;product=tRNA-Val NZ_CP100601.1 RefSeq gene 2288265 2288843 . + . ID=gene-NLI98_RS11005;Name=NLI98_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11005;old_locus_tag=NLI98_10995 NZ_CP100601.1 Protein Homology CDS 2288265 2288843 . + 0 ID=cds-WP_048989756.1;Parent=gene-NLI98_RS11005;Dbxref=Genbank:WP_048989756.1;Name=WP_048989756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227284.1;locus_tag=NLI98_RS11005;product=TIGR00730 family Rossman fold protein;protein_id=WP_048989756.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2288984 2289334 . - . ID=gene-NLI98_RS11010;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=NLI98_RS11010;old_locus_tag=NLI98_11000 NZ_CP100601.1 Protein Homology CDS 2288984 2289334 . - 0 ID=cds-WP_002907794.1;Parent=gene-NLI98_RS11010;Dbxref=Genbank:WP_002907794.1;Name=WP_002907794.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226780.1;locus_tag=NLI98_RS11010;product=acid resistance repetitive basic protein Asr;protein_id=WP_002907794.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2289510 2290883 . - . ID=gene-NLI98_RS11015;Name=mdtK;gbkey=Gene;gene=mdtK;gene_biotype=protein_coding;locus_tag=NLI98_RS11015;old_locus_tag=NLI98_11005 NZ_CP100601.1 Protein Homology CDS 2289510 2290883 . - 0 ID=cds-WP_064278900.1;Parent=gene-NLI98_RS11015;Dbxref=Genbank:WP_064278900.1;Name=WP_064278900.1;gbkey=CDS;gene=mdtK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227282.1;locus_tag=NLI98_RS11015;product=MdtK family multidrug efflux MATE transporter;protein_id=WP_064278900.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2291113 2291748 . + . ID=gene-NLI98_RS11020;Name=NLI98_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11020;old_locus_tag=NLI98_11010 NZ_CP100601.1 Protein Homology CDS 2291113 2291748 . + 0 ID=cds-WP_002907792.1;Parent=gene-NLI98_RS11020;Dbxref=Genbank:WP_002907792.1;Name=WP_002907792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227281.1;locus_tag=NLI98_RS11020;product=riboflavin synthase;protein_id=WP_002907792.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2291785 2292933 . - . ID=gene-NLI98_RS11025;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=NLI98_RS11025;old_locus_tag=NLI98_11015 NZ_CP100601.1 Protein Homology CDS 2291785 2292933 . - 0 ID=cds-WP_049108876.1;Parent=gene-NLI98_RS11025;Dbxref=Genbank:WP_049108876.1;Name=WP_049108876.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227280.1;locus_tag=NLI98_RS11025;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_049108876.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2293226 2294407 . - . ID=gene-NLI98_RS11030;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;locus_tag=NLI98_RS11030;old_locus_tag=NLI98_11020 NZ_CP100601.1 Protein Homology CDS 2293226 2294407 . - 0 ID=cds-WP_002907785.1;Parent=gene-NLI98_RS11030;Dbxref=Genbank:WP_002907785.1;Name=WP_002907785.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227279.1;locus_tag=NLI98_RS11030;product=purine nucleoside transporter PunC;protein_id=WP_002907785.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2294520 2295524 . + . ID=gene-NLI98_RS11035;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=NLI98_RS11035;old_locus_tag=NLI98_11025 NZ_CP100601.1 Protein Homology CDS 2294520 2295524 . + 0 ID=cds-WP_009307704.1;Parent=gene-NLI98_RS11035;Dbxref=Genbank:WP_009307704.1;Name=WP_009307704.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004143848.1;locus_tag=NLI98_RS11035;product=DNA-binding transcriptional activator PunR;protein_id=WP_009307704.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2295451 2296476 . - . ID=gene-NLI98_RS11040;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=NLI98_RS11040;old_locus_tag=NLI98_11030 NZ_CP100601.1 Protein Homology CDS 2295451 2296476 . - 0 ID=cds-WP_002907778.1;Parent=gene-NLI98_RS11040;Dbxref=Genbank:WP_002907778.1;Name=WP_002907778.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=NLI98_RS11040;product=HTH-type transcriptional repressor PurR;protein_id=WP_002907778.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2296769 2296861 . + . ID=gene-NLI98_RS11045;Name=NLI98_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11045;old_locus_tag=NLI98_11035 NZ_CP100601.1 Protein Homology CDS 2296769 2296861 . + 0 ID=cds-WP_002907776.1;Parent=gene-NLI98_RS11045;Dbxref=Genbank:WP_002907776.1;Name=WP_002907776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001391644.1;locus_tag=NLI98_RS11045;product=YnhF family membrane protein;protein_id=WP_002907776.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2297029 2298195 . + . ID=gene-NLI98_RS11050;Name=NLI98_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11050;old_locus_tag=NLI98_11040 NZ_CP100601.1 Protein Homology CDS 2297029 2298195 . + 0 ID=cds-WP_004143846.1;Parent=gene-NLI98_RS11050;Dbxref=Genbank:WP_004143846.1;Name=WP_004143846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227277.1;locus_tag=NLI98_RS11050;product=MFS transporter;protein_id=WP_004143846.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2298257 2298838 . - . ID=gene-NLI98_RS11055;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=NLI98_RS11055;old_locus_tag=NLI98_11045 NZ_CP100601.1 Protein Homology CDS 2298257 2298838 . - 0 ID=cds-WP_002907771.1;Parent=gene-NLI98_RS11055;Dbxref=Genbank:WP_002907771.1;Name=WP_002907771.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079002.1;locus_tag=NLI98_RS11055;product=superoxide dismutase [Fe];protein_id=WP_002907771.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2299308 2299793 . + . ID=gene-NLI98_RS11060;Name=NLI98_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11060;old_locus_tag=NLI98_11050 NZ_CP100601.1 Protein Homology CDS 2299308 2299793 . + 0 ID=cds-WP_004184275.1;Parent=gene-NLI98_RS11060;Dbxref=Genbank:WP_004184275.1;Name=WP_004184275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227275.1;locus_tag=NLI98_RS11060;product=AraC family transcriptional regulator;protein_id=WP_004184275.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2299748 2300620 . - . ID=gene-NLI98_RS11065;Name=NLI98_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11065;old_locus_tag=NLI98_11055 NZ_CP100601.1 Protein Homology CDS 2299748 2300620 . - 0 ID=cds-WP_004151204.1;Parent=gene-NLI98_RS11065;Dbxref=Genbank:WP_004151204.1;Name=WP_004151204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541517.1;locus_tag=NLI98_RS11065;product=C40 family peptidase;protein_id=WP_004151204.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2300961 2301308 . + . ID=gene-NLI98_RS11070;Name=NLI98_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11070;old_locus_tag=NLI98_11060 NZ_CP100601.1 Protein Homology CDS 2300961 2301308 . + 0 ID=cds-WP_002907768.1;Parent=gene-NLI98_RS11070;Dbxref=Genbank:WP_002907768.1;Name=WP_002907768.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227273.1;locus_tag=NLI98_RS11070;product=Grx4 family monothiol glutaredoxin;protein_id=WP_002907768.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2301356 2302003 . - . ID=gene-NLI98_RS11075;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=NLI98_RS11075;old_locus_tag=NLI98_11065 NZ_CP100601.1 Protein Homology CDS 2301356 2302003 . - 0 ID=cds-WP_002907766.1;Parent=gene-NLI98_RS11075;Dbxref=Genbank:WP_002907766.1;Name=WP_002907766.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227272.1;locus_tag=NLI98_RS11075;product=ribonuclease T;protein_id=WP_002907766.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2302141 2302548 . - . ID=gene-NLI98_RS11080;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=NLI98_RS11080;old_locus_tag=NLI98_11070 NZ_CP100601.1 Protein Homology CDS 2302141 2302548 . - 0 ID=cds-WP_002907764.1;Parent=gene-NLI98_RS11080;Dbxref=Genbank:WP_002907764.1;Name=WP_002907764.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008500591.1;locus_tag=NLI98_RS11080;product=lactoylglutathione lyase;protein_id=WP_002907764.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2302627 2303724 . - . ID=gene-NLI98_RS11085;Name=NLI98_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11085;old_locus_tag=NLI98_11075 NZ_CP100601.1 Protein Homology CDS 2302627 2303724 . - 0 ID=cds-WP_002907763.1;Parent=gene-NLI98_RS11085;Dbxref=Genbank:WP_002907763.1;Name=WP_002907763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227270.1;locus_tag=NLI98_RS11085;product=alkene reductase;protein_id=WP_002907763.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2303778 2304377 . - . ID=gene-NLI98_RS11090;Name=NLI98_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11090;old_locus_tag=NLI98_11080 NZ_CP100601.1 Protein Homology CDS 2303778 2304377 . - 0 ID=cds-WP_004175857.1;Parent=gene-NLI98_RS11090;Dbxref=Genbank:WP_004175857.1;Name=WP_004175857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227269.1;locus_tag=NLI98_RS11090;product=TetR/AcrR family transcriptional regulator;protein_id=WP_004175857.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2304517 2304759 . + . ID=gene-NLI98_RS11095;Name=NLI98_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11095;old_locus_tag=NLI98_11085 NZ_CP100601.1 Protein Homology CDS 2304517 2304759 . + 0 ID=cds-WP_004189722.1;Parent=gene-NLI98_RS11095;Dbxref=Genbank:WP_004189722.1;Name=WP_004189722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227268.1;locus_tag=NLI98_RS11095;product=DUF1289 domain-containing protein;protein_id=WP_004189722.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2304808 2305704 . + . ID=gene-NLI98_RS11100;Name=NLI98_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11100;old_locus_tag=NLI98_11090 NZ_CP100601.1 Protein Homology CDS 2304808 2305704 . + 0 ID=cds-WP_002907760.1;Parent=gene-NLI98_RS11100;Dbxref=Genbank:WP_002907760.1;Name=WP_002907760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227267.1;locus_tag=NLI98_RS11100;product=aldo/keto reductase family oxidoreductase;protein_id=WP_002907760.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2305774 2306295 . + . ID=gene-NLI98_RS11105;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=NLI98_RS11105;old_locus_tag=NLI98_11095 NZ_CP100601.1 Protein Homology CDS 2305774 2306295 . + 0 ID=cds-WP_002907759.1;Parent=gene-NLI98_RS11105;Dbxref=Genbank:WP_002907759.1;Name=WP_002907759.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017901092.1;locus_tag=NLI98_RS11105;product=superoxide dismutase [Cu-Zn] SodC;protein_id=WP_002907759.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2306288 2308312 . - . ID=gene-NLI98_RS11110;Name=NLI98_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11110;old_locus_tag=NLI98_11100 NZ_CP100601.1 Protein Homology CDS 2306288 2308312 . - 0 ID=cds-WP_088498279.1;Parent=gene-NLI98_RS11110;Dbxref=Genbank:WP_088498279.1;Name=WP_088498279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200123.1;locus_tag=NLI98_RS11110;product=FUSC family protein;protein_id=WP_088498279.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2308312 2309208 . - . ID=gene-NLI98_RS11115;Name=NLI98_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11115;old_locus_tag=NLI98_11105 NZ_CP100601.1 Protein Homology CDS 2308312 2309208 . - 0 ID=cds-WP_004891451.1;Parent=gene-NLI98_RS11115;Dbxref=Genbank:WP_004891451.1;Name=WP_004891451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227263.1;locus_tag=NLI98_RS11115;product=HlyD family secretion protein;protein_id=WP_004891451.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2309219 2309455 . - . ID=gene-NLI98_RS11120;Name=NLI98_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11120;old_locus_tag=NLI98_11110 NZ_CP100601.1 Protein Homology CDS 2309219 2309455 . - 0 ID=cds-WP_004143834.1;Parent=gene-NLI98_RS11120;Dbxref=Genbank:WP_004143834.1;Name=WP_004143834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227262.1;locus_tag=NLI98_RS11120;product=DUF1656 domain-containing protein;protein_id=WP_004143834.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2309628 2310068 . + . ID=gene-NLI98_RS11125;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=NLI98_RS11125;old_locus_tag=NLI98_11115 NZ_CP100601.1 Protein Homology CDS 2309628 2310068 . + 0 ID=cds-WP_004143833.1;Parent=gene-NLI98_RS11125;Dbxref=Genbank:WP_004143833.1;Name=WP_004143833.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460407.3;locus_tag=NLI98_RS11125;product=transcriptional regulator SlyA;protein_id=WP_004143833.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2310102 2311463 . - . ID=gene-NLI98_RS11130;Name=NLI98_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11130;old_locus_tag=NLI98_11120 NZ_CP100601.1 Protein Homology CDS 2310102 2311463 . - 0 ID=cds-WP_004180166.1;Parent=gene-NLI98_RS11130;Dbxref=Genbank:WP_004180166.1;Name=WP_004180166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227259.1;locus_tag=NLI98_RS11130;product=GGDEF domain-containing protein;protein_id=WP_004180166.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2311686 2312153 . - . ID=gene-NLI98_RS11135;Name=slyB;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=NLI98_RS11135;old_locus_tag=NLI98_11125 NZ_CP100601.1 Protein Homology CDS 2311686 2312153 . - 0 ID=cds-WP_002907749.1;Parent=gene-NLI98_RS11135;Dbxref=Genbank:WP_002907749.1;Name=WP_002907749.1;gbkey=CDS;gene=slyB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227258.1;locus_tag=NLI98_RS11135;product=outer membrane lipoprotein SlyB;protein_id=WP_002907749.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2312421 2313545 . + . ID=gene-NLI98_RS11140;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=NLI98_RS11140;old_locus_tag=NLI98_11130 NZ_CP100601.1 Protein Homology CDS 2312421 2313545 . + 0 ID=cds-WP_004143831.1;Parent=gene-NLI98_RS11140;Dbxref=Genbank:WP_004143831.1;Name=WP_004143831.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227257.1;locus_tag=NLI98_RS11140;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_004143831.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2313638 2313961 . + . ID=gene-NLI98_RS11145;Name=mliC;gbkey=Gene;gene=mliC;gene_biotype=protein_coding;locus_tag=NLI98_RS11145;old_locus_tag=NLI98_11135 NZ_CP100601.1 Protein Homology CDS 2313638 2313961 . + 0 ID=cds-WP_002907744.1;Parent=gene-NLI98_RS11145;Dbxref=Genbank:WP_002907744.1;Name=WP_002907744.1;gbkey=CDS;gene=mliC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136809.1;locus_tag=NLI98_RS11145;product=C-type lysozyme inhibitor;protein_id=WP_002907744.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2314019 2314675 . + . ID=gene-NLI98_RS11150;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=NLI98_RS11150;old_locus_tag=NLI98_11140 NZ_CP100601.1 Protein Homology CDS 2314019 2314675 . + 0 ID=cds-WP_002907742.1;Parent=gene-NLI98_RS11150;Dbxref=Genbank:WP_002907742.1;Name=WP_002907742.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127173.1;locus_tag=NLI98_RS11150;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_002907742.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2314800 2316074 . + . ID=gene-NLI98_RS11155;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=NLI98_RS11155;old_locus_tag=NLI98_11145 NZ_CP100601.1 Protein Homology CDS 2314800 2316074 . + 0 ID=cds-WP_002907740.1;Parent=gene-NLI98_RS11155;Dbxref=Genbank:WP_002907740.1;Name=WP_002907740.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=NLI98_RS11155;product=tyrosine--tRNA ligase;protein_id=WP_002907740.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2316136 2316996 . + . ID=gene-NLI98_RS11160;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=NLI98_RS11160;old_locus_tag=NLI98_11150 NZ_CP100601.1 Protein Homology CDS 2316136 2316996 . + 0 ID=cds-WP_002907739.1;Parent=gene-NLI98_RS11160;Dbxref=Genbank:WP_002907739.1;Name=WP_002907739.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227253.1;locus_tag=NLI98_RS11160;product=pyridoxal kinase PdxY;protein_id=WP_002907739.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2317039 2317644 . - . ID=gene-NLI98_RS11165;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=NLI98_RS11165;old_locus_tag=NLI98_11155 NZ_CP100601.1 Protein Homology CDS 2317039 2317644 . - 0 ID=cds-WP_002907736.1;Parent=gene-NLI98_RS11165;Dbxref=Genbank:WP_002907736.1;Name=WP_002907736.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227252.1;locus_tag=NLI98_RS11165;product=glutathione transferase GstA;protein_id=WP_002907736.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2317755 2319260 . - . ID=gene-NLI98_RS11170;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=NLI98_RS11170;old_locus_tag=NLI98_11160 NZ_CP100601.1 Protein Homology CDS 2317755 2319260 . - 0 ID=cds-WP_004151206.1;Parent=gene-NLI98_RS11170;Dbxref=Genbank:WP_004151206.1;Name=WP_004151206.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227251.1;locus_tag=NLI98_RS11170;product=dipeptide/tripeptide permease DtpA;protein_id=WP_004151206.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2319868 2320503 . - . ID=gene-NLI98_RS11175;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=NLI98_RS11175;old_locus_tag=NLI98_11165 NZ_CP100601.1 Protein Homology CDS 2319868 2320503 . - 0 ID=cds-WP_002907734.1;Parent=gene-NLI98_RS11175;Dbxref=Genbank:WP_002907734.1;Name=WP_002907734.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227249.1;locus_tag=NLI98_RS11175;product=endonuclease III;protein_id=WP_002907734.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2320505 2321203 . - . ID=gene-NLI98_RS11180;Name=NLI98_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11180;old_locus_tag=NLI98_11170 NZ_CP100601.1 Protein Homology CDS 2320505 2321203 . - 0 ID=cds-WP_002907733.1;Parent=gene-NLI98_RS11180;Dbxref=Genbank:WP_002907733.1;Name=WP_002907733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227248.1;locus_tag=NLI98_RS11180;product=electron transport complex subunit E;protein_id=WP_002907733.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2321206 2321826 . - . ID=gene-NLI98_RS11185;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=NLI98_RS11185;old_locus_tag=NLI98_11175 NZ_CP100601.1 Protein Homology CDS 2321206 2321826 . - 0 ID=cds-WP_002907731.1;Parent=gene-NLI98_RS11185;Dbxref=Genbank:WP_002907731.1;Name=WP_002907731.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416148.1;locus_tag=NLI98_RS11185;product=electron transport complex subunit RsxG;protein_id=WP_002907731.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2321837 2322889 . - . ID=gene-NLI98_RS11190;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=NLI98_RS11190;old_locus_tag=NLI98_11180 NZ_CP100601.1 Protein Homology CDS 2321837 2322889 . - 0 ID=cds-WP_002907730.1;Parent=gene-NLI98_RS11190;Dbxref=Genbank:WP_002907730.1;Name=WP_002907730.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227246.1;locus_tag=NLI98_RS11190;product=electron transport complex subunit RsxD;protein_id=WP_002907730.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2322890 2325151 . - . ID=gene-NLI98_RS11195;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=NLI98_RS11195;old_locus_tag=NLI98_11185 NZ_CP100601.1 Protein Homology CDS 2322890 2325151 . - 0 ID=cds-WP_141827958.1;Parent=gene-NLI98_RS11195;Dbxref=Genbank:WP_141827958.1;Name=WP_141827958.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460420.1;locus_tag=NLI98_RS11195;product=electron transport complex subunit RsxC;protein_id=WP_141827958.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2325144 2325722 . - . ID=gene-NLI98_RS11200;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=NLI98_RS11200;old_locus_tag=NLI98_11190 NZ_CP100601.1 Protein Homology CDS 2325144 2325722 . - 0 ID=cds-WP_004143816.1;Parent=gene-NLI98_RS11200;Dbxref=Genbank:WP_004143816.1;Name=WP_004143816.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020078990.1;locus_tag=NLI98_RS11200;product=electron transport complex subunit RsxB;protein_id=WP_004143816.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2325722 2326303 . - . ID=gene-NLI98_RS11205;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=NLI98_RS11205;old_locus_tag=NLI98_11195 NZ_CP100601.1 Protein Homology CDS 2325722 2326303 . - 0 ID=cds-WP_002907658.1;Parent=gene-NLI98_RS11205;Dbxref=Genbank:WP_002907658.1;Name=WP_002907658.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=NLI98_RS11205;product=electron transport complex subunit RsxA;protein_id=WP_002907658.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2326382 2326822 . - . ID=gene-NLI98_RS11210;Name=NLI98_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11210;old_locus_tag=NLI98_11200 NZ_CP100601.1 Protein Homology CDS 2326382 2326822 . - 0 ID=cds-WP_002907654.1;Parent=gene-NLI98_RS11210;Dbxref=Genbank:WP_002907654.1;Name=WP_002907654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227241.1;locus_tag=NLI98_RS11210;product=DUF2569 domain-containing protein;protein_id=WP_002907654.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2326898 2327113 . - . ID=gene-NLI98_RS11215;Name=ydgT;gbkey=Gene;gene=ydgT;gene_biotype=protein_coding;locus_tag=NLI98_RS11215;old_locus_tag=NLI98_11205 NZ_CP100601.1 Protein Homology CDS 2326898 2327113 . - 0 ID=cds-WP_002907652.1;Parent=gene-NLI98_RS11215;Dbxref=Genbank:WP_002907652.1;Name=WP_002907652.1;gbkey=CDS;gene=ydgT;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460424.3;locus_tag=NLI98_RS11215;product=transcription modulator YdgT;protein_id=WP_002907652.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2327330 2328700 . - . ID=gene-NLI98_RS11220;Name=NLI98_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11220;old_locus_tag=NLI98_11210 NZ_CP100601.1 Protein Homology CDS 2327330 2328700 . - 0 ID=cds-WP_004180160.1;Parent=gene-NLI98_RS11220;Dbxref=Genbank:WP_004180160.1;Name=WP_004180160.1;Ontology_term=GO:0030245,GO:0008422;gbkey=CDS;go_function=beta-glucosidase activity|0008422||IEA;go_process=cellulose catabolic process|0030245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227239.1;locus_tag=NLI98_RS11220;product=GH1 family beta-glucosidase;protein_id=WP_004180160.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2328816 2328953 . - . ID=gene-NLI98_RS11225;Name=blr;gbkey=Gene;gene=blr;gene_biotype=protein_coding;locus_tag=NLI98_RS11225;old_locus_tag=NLI98_11215 NZ_CP100601.1 Protein Homology CDS 2328816 2328953 . - 0 ID=cds-WP_004227851.1;Parent=gene-NLI98_RS11225;Dbxref=Genbank:WP_004227851.1;Name=WP_004227851.1;gbkey=CDS;gene=blr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004227851.1;locus_tag=NLI98_RS11225;product=division septum protein Blr;protein_id=WP_004227851.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2329144 2330184 . + . ID=gene-NLI98_RS11230;Name=NLI98_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11230;old_locus_tag=NLI98_11220 NZ_CP100601.1 Protein Homology CDS 2329144 2330184 . + 0 ID=cds-WP_002907650.1;Parent=gene-NLI98_RS11230;Dbxref=Genbank:WP_002907650.1;Name=WP_002907650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227238.1;locus_tag=NLI98_RS11230;product=oxidoreductase;protein_id=WP_002907650.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2330220 2331221 . - . ID=gene-NLI98_RS11235;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=NLI98_RS11235;old_locus_tag=NLI98_11225 NZ_CP100601.1 Protein Homology CDS 2330220 2331221 . - 0 ID=cds-WP_004151209.1;Parent=gene-NLI98_RS11235;Dbxref=Genbank:WP_004151209.1;Name=WP_004151209.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227237.1;locus_tag=NLI98_RS11235;product=adenosine deaminase;protein_id=WP_004151209.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2331379 2332533 . - . ID=gene-NLI98_RS11240;Name=NLI98_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11240;old_locus_tag=NLI98_11230 NZ_CP100601.1 Protein Homology CDS 2331379 2332533 . - 0 ID=cds-WP_031280257.1;Parent=gene-NLI98_RS11240;Dbxref=Genbank:WP_031280257.1;Name=WP_031280257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227236.1;locus_tag=NLI98_RS11240;product=MFS transporter;protein_id=WP_031280257.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2332727 2333191 . + . ID=gene-NLI98_RS11245;Name=NLI98_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11245;old_locus_tag=NLI98_11235 NZ_CP100601.1 Protein Homology CDS 2332727 2333191 . + 0 ID=cds-WP_004180158.1;Parent=gene-NLI98_RS11245;Dbxref=Genbank:WP_004180158.1;Name=WP_004180158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804087.1;locus_tag=NLI98_RS11245;product=helix-turn-helix transcriptional regulator;protein_id=WP_004180158.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2333435 2333620 . + . ID=gene-NLI98_RS11250;Name=NLI98_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11250;old_locus_tag=NLI98_11240 NZ_CP100601.1 Protein Homology CDS 2333435 2333620 . + 0 ID=cds-WP_002907644.1;Parent=gene-NLI98_RS11250;Dbxref=Genbank:WP_002907644.1;Name=WP_002907644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227234.1;locus_tag=NLI98_RS11250;product=hypothetical protein;protein_id=WP_002907644.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2333630 2333983 . - . ID=gene-NLI98_RS11255;Name=NLI98_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11255;old_locus_tag=NLI98_11245 NZ_CP100601.1 Protein Homology CDS 2333630 2333983 . - 0 ID=cds-WP_225733957.1;Parent=gene-NLI98_RS11255;Dbxref=Genbank:WP_225733957.1;Name=WP_225733957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227233.1;locus_tag=NLI98_RS11255;product=RND transporter;protein_id=WP_225733957.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2334252 2334779 . + . ID=gene-NLI98_RS11260;Name=cybB;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=NLI98_RS11260;old_locus_tag=NLI98_11250 NZ_CP100601.1 Protein Homology CDS 2334252 2334779 . + 0 ID=cds-WP_002907640.1;Parent=gene-NLI98_RS11260;Dbxref=Genbank:WP_002907640.1;Name=WP_002907640.1;Ontology_term=GO:0022904,GO:0009055,GO:0016020;gbkey=CDS;gene=cybB;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227232.1;locus_tag=NLI98_RS11260;product=cytochrome b561;protein_id=WP_002907640.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2334884 2335159 . + . ID=gene-NLI98_RS11265;Name=NLI98_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11265;old_locus_tag=NLI98_11255 NZ_CP100601.1 Protein Homology CDS 2334884 2335159 . + 0 ID=cds-WP_002907563.1;Parent=gene-NLI98_RS11265;Dbxref=Genbank:WP_002907563.1;Name=WP_002907563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227231.1;locus_tag=NLI98_RS11265;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_002907563.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2335184 2336302 . + . ID=gene-NLI98_RS11270;Name=NLI98_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11270;old_locus_tag=NLI98_11260 NZ_CP100601.1 Protein Homology CDS 2335184 2336302 . + 0 ID=cds-WP_004143804.1;Parent=gene-NLI98_RS11270;Dbxref=Genbank:WP_004143804.1;Name=WP_004143804.1;Ontology_term=GO:0006113,GO:0009404,GO:0004024,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,S-(hydroxymethyl)glutathione dehydrogenase activity|0051903||IEA;go_process=fermentation|0006113||IEA,toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227230.1;locus_tag=NLI98_RS11270;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_004143804.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2336372 2338744 . - . ID=gene-NLI98_RS11275;Name=NLI98_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11275;old_locus_tag=NLI98_11265 NZ_CP100601.1 Protein Homology CDS 2336372 2338744 . - 0 ID=cds-WP_032440060.1;Parent=gene-NLI98_RS11275;Dbxref=Genbank:WP_032440060.1;Name=WP_032440060.1;Ontology_term=GO:0016491,GO:0048038,GO:0016020,GO:0030288;gbkey=CDS;go_component=membrane|0016020||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=oxidoreductase activity|0016491||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227229.1;locus_tag=NLI98_RS11275;product=membrane-bound PQQ-dependent dehydrogenase%2C glucose/quinate/shikimate family;protein_id=WP_032440060.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2339045 2339968 . - . ID=gene-NLI98_RS11280;Name=NLI98_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11280;old_locus_tag=NLI98_11270 NZ_CP100601.1 Protein Homology CDS 2339045 2339968 . - 0 ID=cds-WP_004143800.1;Parent=gene-NLI98_RS11280;Dbxref=Genbank:WP_004143800.1;Name=WP_004143800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227228.1;locus_tag=NLI98_RS11280;product=LysR substrate-binding domain-containing protein;protein_id=WP_004143800.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2340146 2340766 . - . ID=gene-NLI98_RS11285;Name=pcaG;gbkey=Gene;gene=pcaG;gene_biotype=protein_coding;locus_tag=NLI98_RS11285;old_locus_tag=NLI98_11275 NZ_CP100601.1 Protein Homology CDS 2340146 2340766 . - 0 ID=cds-WP_004175889.1;Parent=gene-NLI98_RS11285;Dbxref=Genbank:WP_004175889.1;Name=WP_004175889.1;Ontology_term=GO:0046278,GO:0018578;gbkey=CDS;gene=pcaG;go_function=protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227227.1;locus_tag=NLI98_RS11285;product=protocatechuate 3%2C4-dioxygenase subunit alpha;protein_id=WP_004175889.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2340763 2341503 . - . ID=gene-NLI98_RS11290;Name=pcaH;gbkey=Gene;gene=pcaH;gene_biotype=protein_coding;locus_tag=NLI98_RS11290;old_locus_tag=NLI98_11280 NZ_CP100601.1 Protein Homology CDS 2340763 2341503 . - 0 ID=cds-WP_004214973.1;Parent=gene-NLI98_RS11290;Dbxref=Genbank:WP_004214973.1;Name=WP_004214973.1;Ontology_term=GO:0046278,GO:0018578;gbkey=CDS;gene=pcaH;go_function=protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227226.1;locus_tag=NLI98_RS11290;product=protocatechuate 3%2C4-dioxygenase subunit beta;protein_id=WP_004214973.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2341743 2343086 . + . ID=gene-NLI98_RS11295;Name=NLI98_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11295;old_locus_tag=NLI98_11285 NZ_CP100601.1 Protein Homology CDS 2341743 2343086 . + 0 ID=cds-WP_002907549.1;Parent=gene-NLI98_RS11295;Dbxref=Genbank:WP_002907549.1;Name=WP_002907549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227225.1;locus_tag=NLI98_RS11295;product=VOC family protein;protein_id=WP_002907549.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2343128 2344633 . + . ID=gene-NLI98_RS11300;Name=NLI98_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11300;old_locus_tag=NLI98_11290 NZ_CP100601.1 Protein Homology CDS 2343128 2344633 . + 0 ID=cds-WP_004189752.1;Parent=gene-NLI98_RS11300;Dbxref=Genbank:WP_004189752.1;Name=WP_004189752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227224.1;locus_tag=NLI98_RS11300;product=carboxylesterase/lipase family protein;protein_id=WP_004189752.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2344680 2345768 . - . ID=gene-NLI98_RS11305;Name=NLI98_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11305;old_locus_tag=NLI98_11295 NZ_CP100601.1 Protein Homology CDS 2344680 2345768 . - 0 ID=cds-WP_004175900.1;Parent=gene-NLI98_RS11305;Dbxref=Genbank:WP_004175900.1;Name=WP_004175900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227223.1;locus_tag=NLI98_RS11305;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_004175900.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2346206 2347861 . + . ID=gene-NLI98_RS11310;Name=NLI98_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11310;old_locus_tag=NLI98_11300 NZ_CP100601.1 Protein Homology CDS 2346206 2347861 . + 0 ID=cds-WP_004189753.1;Parent=gene-NLI98_RS11310;Dbxref=Genbank:WP_004189753.1;Name=WP_004189753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227222.1;locus_tag=NLI98_RS11310;product=glucan biosynthesis protein;protein_id=WP_004189753.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2347915 2348493 . + . ID=gene-NLI98_RS11315;Name=rimL;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=NLI98_RS11315;old_locus_tag=NLI98_11305 NZ_CP100601.1 Protein Homology CDS 2347915 2348493 . + 0 ID=cds-WP_004189754.1;Parent=gene-NLI98_RS11315;Dbxref=Genbank:WP_004189754.1;Name=WP_004189754.1;gbkey=CDS;gene=rimL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227221.1;locus_tag=NLI98_RS11315;product=50S ribosomal protein L7/L12-serine acetyltransferase;protein_id=WP_004189754.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2348479 2349459 . - . ID=gene-NLI98_RS11320;Name=ydcK;gbkey=Gene;gene=ydcK;gene_biotype=protein_coding;locus_tag=NLI98_RS11320;old_locus_tag=NLI98_11310 NZ_CP100601.1 Protein Homology CDS 2348479 2349459 . - 0 ID=cds-WP_004189755.1;Parent=gene-NLI98_RS11320;Dbxref=Genbank:WP_004189755.1;Name=WP_004189755.1;gbkey=CDS;gene=ydcK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227220.1;locus_tag=NLI98_RS11320;product=YdcK family protein;protein_id=WP_004189755.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2349571 2350575 . + . ID=gene-NLI98_RS11325;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=NLI98_RS11325;old_locus_tag=NLI98_11315 NZ_CP100601.1 Protein Homology CDS 2349571 2350575 . + 0 ID=cds-WP_002907483.1;Parent=gene-NLI98_RS11325;Dbxref=Genbank:WP_002907483.1;Name=WP_002907483.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227219.1;locus_tag=NLI98_RS11325;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_002907483.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2350572 2351168 . + . ID=gene-NLI98_RS11330;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=NLI98_RS11330;old_locus_tag=NLI98_11320 NZ_CP100601.1 Protein Homology CDS 2350572 2351168 . + 0 ID=cds-WP_004189756.1;Parent=gene-NLI98_RS11330;Dbxref=Genbank:WP_004189756.1;Name=WP_004189756.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227218.1;locus_tag=NLI98_RS11330;product=tellurite resistance methyltransferase TehB;protein_id=WP_004189756.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2351429 2352097 . + . ID=gene-NLI98_RS11335;Name=NLI98_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11335;old_locus_tag=NLI98_11325 NZ_CP100601.1 Protein Homology CDS 2351429 2352097 . + 0 ID=cds-WP_004184252.1;Parent=gene-NLI98_RS11335;Dbxref=Genbank:WP_004184252.1;Name=WP_004184252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227217.1;locus_tag=NLI98_RS11335;product=DUF3313 domain-containing protein;protein_id=WP_004184252.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2352144 2353040 . - . ID=gene-NLI98_RS11340;Name=NLI98_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11340;old_locus_tag=NLI98_11330 NZ_CP100601.1 Protein Homology CDS 2352144 2353040 . - 0 ID=cds-WP_004175913.1;Parent=gene-NLI98_RS11340;Dbxref=Genbank:WP_004175913.1;Name=WP_004175913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227216.1;locus_tag=NLI98_RS11340;product=DMT family transporter;protein_id=WP_004175913.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2353221 2354090 . + . ID=gene-NLI98_RS11345;Name=NLI98_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11345;old_locus_tag=NLI98_11335 NZ_CP100601.1 Protein Homology CDS 2353221 2354090 . + 0 ID=cds-WP_004151213.1;Parent=gene-NLI98_RS11345;Dbxref=Genbank:WP_004151213.1;Name=WP_004151213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008804671.1;locus_tag=NLI98_RS11345;product=AraC family transcriptional regulator;protein_id=WP_004151213.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2354067 2355233 . - . ID=gene-NLI98_RS11350;Name=NLI98_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11350;old_locus_tag=NLI98_11340 NZ_CP100601.1 Protein Homology CDS 2354067 2355233 . - 0 ID=cds-WP_009307732.1;Parent=gene-NLI98_RS11350;Dbxref=Genbank:WP_009307732.1;Name=WP_009307732.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227213.1;locus_tag=NLI98_RS11350;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_009307732.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2355419 2355988 . + . ID=gene-NLI98_RS11355;Name=NLI98_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11355;old_locus_tag=NLI98_11345 NZ_CP100601.1 Protein Homology CDS 2355419 2355988 . + 0 ID=cds-WP_002907473.1;Parent=gene-NLI98_RS11355;Dbxref=Genbank:WP_002907473.1;Name=WP_002907473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227212.1;locus_tag=NLI98_RS11355;product=XRE family transcriptional regulator;protein_id=WP_002907473.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2355999 2356166 . - . ID=gene-NLI98_RS11360;Name=NLI98_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11360;old_locus_tag=NLI98_11350 NZ_CP100601.1 Protein Homology CDS 2355999 2356166 . - 0 ID=cds-WP_014343127.1;Parent=gene-NLI98_RS11360;Dbxref=Genbank:WP_014343127.1;Name=WP_014343127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227211.1;locus_tag=NLI98_RS11360;product=hypothetical protein;protein_id=WP_014343127.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2356200 2358161 . + . ID=gene-NLI98_RS11365;Name=NLI98_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11365;old_locus_tag=NLI98_11355 NZ_CP100601.1 Protein Homology CDS 2356200 2358161 . + 0 ID=cds-WP_002907469.1;Parent=gene-NLI98_RS11365;Dbxref=Genbank:WP_002907469.1;Name=WP_002907469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227210.1;locus_tag=NLI98_RS11365;product=U32 family peptidase;protein_id=WP_002907469.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2358174 2358404 . - . ID=gene-NLI98_RS11370;Name=NLI98_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11370;old_locus_tag=NLI98_11360 NZ_CP100601.1 Protein Homology CDS 2358174 2358404 . - 0 ID=cds-WP_023313275.1;Parent=gene-NLI98_RS11370;Dbxref=Genbank:WP_023313275.1;Name=WP_023313275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227209.1;locus_tag=NLI98_RS11370;product=DUF2554 family protein;protein_id=WP_023313275.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2358553 2358858 . - . ID=gene-NLI98_RS11375;Name=NLI98_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11375;old_locus_tag=NLI98_11365 NZ_CP100601.1 Protein Homology CDS 2358553 2358858 . - 0 ID=cds-WP_038808593.1;Parent=gene-NLI98_RS11375;Dbxref=Genbank:WP_038808593.1;Name=WP_038808593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004175928.1;locus_tag=NLI98_RS11375;product=hypothetical protein;protein_id=WP_038808593.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2358955 2359080 . - . ID=gene-NLI98_RS11380;Name=NLI98_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11380;old_locus_tag=NLI98_11370 NZ_CP100601.1 Protein Homology CDS 2358955 2359080 . - 0 ID=cds-WP_004180143.1;Parent=gene-NLI98_RS11380;Dbxref=Genbank:WP_004180143.1;Name=WP_004180143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227207.1;locus_tag=NLI98_RS11380;product=DUF2474 domain-containing protein;protein_id=WP_004180143.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2359080 2360090 . - . ID=gene-NLI98_RS11385;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=NLI98_RS11385;old_locus_tag=NLI98_11375 NZ_CP100601.1 Protein Homology CDS 2359080 2360090 . - 0 ID=cds-WP_009484795.1;Parent=gene-NLI98_RS11385;Dbxref=Genbank:WP_009484795.1;Name=WP_009484795.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227206.1;locus_tag=NLI98_RS11385;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_009484795.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2360090 2361487 . - . ID=gene-NLI98_RS11390;Name=NLI98_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11390;old_locus_tag=NLI98_11380 NZ_CP100601.1 Protein Homology CDS 2360090 2361487 . - 0 ID=cds-WP_087833978.1;Parent=gene-NLI98_RS11390;Dbxref=Genbank:WP_087833978.1;Name=WP_087833978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227205.1;locus_tag=NLI98_RS11390;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_087833978.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2362175 2363587 . + . ID=gene-NLI98_RS11395;Name=NLI98_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11395;old_locus_tag=NLI98_11385 NZ_CP100601.1 Protein Homology CDS 2362175 2363587 . + 0 ID=cds-WP_004898563.1;Parent=gene-NLI98_RS11395;Dbxref=Genbank:WP_004898563.1;Name=WP_004898563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227204.1;locus_tag=NLI98_RS11395;product=PLP-dependent aminotransferase family protein;protein_id=WP_004898563.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2363892 2365037 . + . ID=gene-NLI98_RS11400;Name=NLI98_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11400;old_locus_tag=NLI98_11390 NZ_CP100601.1 Protein Homology CDS 2363892 2365037 . + 0 ID=cds-WP_002907384.1;Parent=gene-NLI98_RS11400;Dbxref=Genbank:WP_002907384.1;Name=WP_002907384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227203.1;locus_tag=NLI98_RS11400;product=ABC transporter substrate-binding protein;protein_id=WP_002907384.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2365054 2366067 . + . ID=gene-NLI98_RS11405;Name=NLI98_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11405;old_locus_tag=NLI98_11395 NZ_CP100601.1 Protein Homology CDS 2365054 2366067 . + 0 ID=cds-WP_004151215.1;Parent=gene-NLI98_RS11405;Dbxref=Genbank:WP_004151215.1;Name=WP_004151215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227202.1;locus_tag=NLI98_RS11405;product=ABC transporter ATP-binding protein;protein_id=WP_004151215.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2366069 2366998 . + . ID=gene-NLI98_RS11410;Name=NLI98_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11410;old_locus_tag=NLI98_11400 NZ_CP100601.1 Protein Homology CDS 2366069 2366998 . + 0 ID=cds-WP_004189770.1;Parent=gene-NLI98_RS11410;Dbxref=Genbank:WP_004189770.1;Name=WP_004189770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227201.1;locus_tag=NLI98_RS11410;product=ABC transporter permease;protein_id=WP_004189770.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2366988 2367794 . + . ID=gene-NLI98_RS11415;Name=NLI98_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11415;old_locus_tag=NLI98_11405 NZ_CP100601.1 Protein Homology CDS 2366988 2367794 . + 0 ID=cds-WP_004143773.1;Parent=gene-NLI98_RS11415;Dbxref=Genbank:WP_004143773.1;Name=WP_004143773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227200.1;locus_tag=NLI98_RS11415;product=ABC transporter permease;protein_id=WP_004143773.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2367817 2369244 . + . ID=gene-NLI98_RS11420;Name=patD;gbkey=Gene;gene=patD;gene_biotype=protein_coding;locus_tag=NLI98_RS11420;old_locus_tag=NLI98_11410 NZ_CP100601.1 Protein Homology CDS 2367817 2369244 . + 0 ID=cds-WP_004189773.1;Parent=gene-NLI98_RS11420;Dbxref=Genbank:WP_004189773.1;Name=WP_004189773.1;Ontology_term=GO:0009447,GO:0019145;gbkey=CDS;gene=patD;go_function=aminobutyraldehyde dehydrogenase activity|0019145||IEA;go_process=putrescine catabolic process|0009447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009307739.1;locus_tag=NLI98_RS11420;product=aminobutyraldehyde dehydrogenase;protein_id=WP_004189773.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2369585 2369707 . - . ID=gene-NLI98_RS11425;Name=NLI98_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11425;old_locus_tag=NLI98_11415 NZ_CP100601.1 Protein Homology CDS 2369585 2369707 . - 0 ID=cds-WP_004175940.1;Parent=gene-NLI98_RS11425;Dbxref=Genbank:WP_004175940.1;Name=WP_004175940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227197.1;locus_tag=NLI98_RS11425;product=small membrane protein;protein_id=WP_004175940.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2369856 2370053 . + . ID=gene-NLI98_RS11430;Name=NLI98_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11430;old_locus_tag=NLI98_11420 NZ_CP100601.1 Protein Homology CDS 2369856 2370053 . + 0 ID=cds-WP_004189776.1;Parent=gene-NLI98_RS11430;Dbxref=Genbank:WP_004189776.1;Name=WP_004189776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189776.1;locus_tag=NLI98_RS11430;product=hypothetical protein;protein_id=WP_004189776.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2370191 2370442 . + . ID=gene-NLI98_RS11435;Name=NLI98_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11435;old_locus_tag=NLI98_11425 NZ_CP100601.1 Protein Homology CDS 2370191 2370442 . + 0 ID=cds-WP_049000528.1;Parent=gene-NLI98_RS11435;Dbxref=Genbank:WP_049000528.1;Name=WP_049000528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227196.1;locus_tag=NLI98_RS11435;product=hypothetical protein;protein_id=WP_049000528.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2370494 2370586 . - . ID=gene-NLI98_RS11440;Name=yncL;gbkey=Gene;gene=yncL;gene_biotype=protein_coding;locus_tag=NLI98_RS11440;old_locus_tag=NLI98_11430 NZ_CP100601.1 Protein Homology CDS 2370494 2370586 . - 0 ID=cds-WP_002906891.1;Parent=gene-NLI98_RS11440;Dbxref=Genbank:WP_002906891.1;Name=WP_002906891.1;gbkey=CDS;gene=yncL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968073.1;locus_tag=NLI98_RS11440;product=stress response membrane protein YncL;protein_id=WP_002906891.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2370782 2370955 . + . ID=gene-NLI98_RS11445;Name=NLI98_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11445;old_locus_tag=NLI98_11435 NZ_CP100601.1 Protein Homology CDS 2370782 2370955 . + 0 ID=cds-WP_002906888.1;Parent=gene-NLI98_RS11445;Dbxref=Genbank:WP_002906888.1;Name=WP_002906888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227195.1;locus_tag=NLI98_RS11445;product=GhoT/OrtT family toxin;protein_id=WP_002906888.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2371044 2371793 . + . ID=gene-NLI98_RS11450;Name=NLI98_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11450;old_locus_tag=NLI98_11440 NZ_CP100601.1 Protein Homology CDS 2371044 2371793 . + 0 ID=cds-WP_032420108.1;Parent=gene-NLI98_RS11450;Dbxref=Genbank:WP_032420108.1;Name=WP_032420108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227194.1;locus_tag=NLI98_RS11450;product=alpha/beta hydrolase;protein_id=WP_032420108.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2371807 2373240 . - . ID=gene-NLI98_RS11455;Name=NLI98_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11455;old_locus_tag=NLI98_11445 NZ_CP100601.1 Protein Homology CDS 2371807 2373240 . - 0 ID=cds-WP_088498216.1;Parent=gene-NLI98_RS11455;Dbxref=Genbank:WP_088498216.1;Name=WP_088498216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227193.1;locus_tag=NLI98_RS11455;product=aldehyde dehydrogenase;protein_id=WP_088498216.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2373510 2375108 . + . ID=gene-NLI98_RS11460;Name=NLI98_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11460;old_locus_tag=NLI98_11455 NZ_CP100601.1 Protein Homology CDS 2373510 2375108 . + 0 ID=cds-WP_014907508.1;Parent=gene-NLI98_RS11460;Dbxref=Genbank:WP_014907508.1;Name=WP_014907508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324732.1;locus_tag=NLI98_RS11460;product=ABC transporter substrate-binding protein;protein_id=WP_014907508.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2375125 2375358 . + . ID=gene-NLI98_RS11465;Name=NLI98_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11465;old_locus_tag=NLI98_11460 NZ_CP100601.1 Protein Homology CDS 2375125 2375358 . + 0 ID=cds-WP_002906801.1;Parent=gene-NLI98_RS11465;Dbxref=Genbank:WP_002906801.1;Name=WP_002906801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227189.1;locus_tag=NLI98_RS11465;product=YdcY family protein;protein_id=WP_002906801.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2375367 2375816 . - . ID=gene-NLI98_RS11470;Name=NLI98_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11470;old_locus_tag=NLI98_11465 NZ_CP100601.1 Protein Homology CDS 2375367 2375816 . - 0 ID=cds-WP_004180135.1;Parent=gene-NLI98_RS11470;Dbxref=Genbank:WP_004180135.1;Name=WP_004180135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227188.1;locus_tag=NLI98_RS11470;product=DMT family transporter;protein_id=WP_004180135.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2375813 2376331 . - . ID=gene-NLI98_RS11475;Name=NLI98_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11475;old_locus_tag=NLI98_11470 NZ_CP100601.1 Protein Homology CDS 2375813 2376331 . - 0 ID=cds-WP_002906796.1;Parent=gene-NLI98_RS11475;Dbxref=Genbank:WP_002906796.1;Name=WP_002906796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227187.1;locus_tag=NLI98_RS11475;product=GNAT family N-acetyltransferase;protein_id=WP_002906796.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2376494 2377075 . + . ID=gene-NLI98_RS11480;Name=NLI98_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11480;old_locus_tag=NLI98_11475 NZ_CP100601.1 Protein Homology CDS 2376494 2377075 . + 0 ID=cds-WP_002906794.1;Parent=gene-NLI98_RS11480;Dbxref=Genbank:WP_002906794.1;Name=WP_002906794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227186.1;locus_tag=NLI98_RS11480;product=XRE family transcriptional regulator;protein_id=WP_002906794.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2377141 2378178 . + . ID=gene-NLI98_RS11485;Name=NLI98_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11485;old_locus_tag=NLI98_11480 NZ_CP100601.1 Protein Homology CDS 2377141 2378178 . + 0 ID=cds-WP_002906792.1;Parent=gene-NLI98_RS11485;Dbxref=Genbank:WP_002906792.1;Name=WP_002906792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227185.1;locus_tag=NLI98_RS11485;product=NADP-dependent oxidoreductase;protein_id=WP_002906792.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2378242 2379177 . - . ID=gene-NLI98_RS11490;Name=rihA;gbkey=Gene;gene=rihA;gene_biotype=protein_coding;locus_tag=NLI98_RS11490;old_locus_tag=NLI98_11485 NZ_CP100601.1 Protein Homology CDS 2378242 2379177 . - 0 ID=cds-WP_021440225.1;Parent=gene-NLI98_RS11490;Dbxref=Genbank:WP_021440225.1;Name=WP_021440225.1;Ontology_term=GO:0006206,GO:0050263;gbkey=CDS;gene=rihA;go_function=ribosylpyrimidine nucleosidase activity|0050263||IEA;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227184.1;locus_tag=NLI98_RS11490;product=pyrimidine-specific ribonucleoside hydrolase RihA;protein_id=WP_021440225.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2379139 2379369 . + . ID=gene-NLI98_RS11495;Name=NLI98_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11495;old_locus_tag=NLI98_11490 NZ_CP100601.1 Protein Homology CDS 2379139 2379369 . + 0 ID=cds-WP_040224288.1;Parent=gene-NLI98_RS11495;Dbxref=Genbank:WP_040224288.1;Name=WP_040224288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227183.1;locus_tag=NLI98_RS11495;product=hypothetical protein;protein_id=WP_040224288.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2379459 2379758 . + . ID=gene-NLI98_RS11500;Name=NLI98_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11500;old_locus_tag=NLI98_11495 NZ_CP100601.1 Protein Homology CDS 2379459 2379758 . + 0 ID=cds-WP_002906788.1;Parent=gene-NLI98_RS11500;Dbxref=Genbank:WP_002906788.1;Name=WP_002906788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227182.1;locus_tag=NLI98_RS11500;product=DUF406 domain-containing protein;protein_id=WP_002906788.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2379857 2381563 . - . ID=gene-NLI98_RS11505;Name=NLI98_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11505;old_locus_tag=NLI98_11500 NZ_CP100601.1 Protein Homology CDS 2379857 2381563 . - 0 ID=cds-WP_048337756.1;Parent=gene-NLI98_RS11505;Dbxref=Genbank:WP_048337756.1;Name=WP_048337756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227181.1;locus_tag=NLI98_RS11505;product=amidohydrolase;protein_id=WP_048337756.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2381761 2383866 . - . ID=gene-NLI98_RS11510;Name=NLI98_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11510;old_locus_tag=NLI98_11505 NZ_CP100601.1 Protein Homology CDS 2381761 2383866 . - 0 ID=cds-WP_004189794.1;Parent=gene-NLI98_RS11510;Dbxref=Genbank:WP_004189794.1;Name=WP_004189794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227180.1;locus_tag=NLI98_RS11510;product=TonB-dependent receptor;protein_id=WP_004189794.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2384125 2385186 . + . ID=gene-NLI98_RS11515;Name=NLI98_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11515;old_locus_tag=NLI98_11510 NZ_CP100601.1 Protein Homology CDS 2384125 2385186 . + 0 ID=cds-WP_020802162.1;Parent=gene-NLI98_RS11515;Dbxref=Genbank:WP_020802162.1;Name=WP_020802162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227179.1;locus_tag=NLI98_RS11515;product=YncE family protein;protein_id=WP_020802162.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2385355 2385576 . + . ID=gene-NLI98_RS11520;Name=NLI98_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11520;old_locus_tag=NLI98_11515 NZ_CP100601.1 Protein Homology CDS 2385355 2385576 . + 0 ID=cds-WP_002906779.1;Parent=gene-NLI98_RS11520;Dbxref=Genbank:WP_002906779.1;Name=WP_002906779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002906779.1;locus_tag=NLI98_RS11520;product=YgdI/YgdR family lipoprotein;protein_id=WP_002906779.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2385627 2387081 . - . ID=gene-NLI98_RS11525;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=NLI98_RS11525;old_locus_tag=NLI98_11520 NZ_CP100601.1 Protein Homology CDS 2385627 2387081 . - 0 ID=cds-WP_002906778.1;Parent=gene-NLI98_RS11525;Dbxref=Genbank:WP_002906778.1;Name=WP_002906778.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227177.1;locus_tag=NLI98_RS11525;product=L-asparagine permease;protein_id=WP_002906778.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2387271 2388158 . - . ID=gene-NLI98_RS11530;Name=NLI98_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11530;old_locus_tag=NLI98_11525 NZ_CP100601.1 Protein Homology CDS 2387271 2388158 . - 0 ID=cds-WP_002906776.1;Parent=gene-NLI98_RS11530;Dbxref=Genbank:WP_002906776.1;Name=WP_002906776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705703.1;locus_tag=NLI98_RS11530;product=LysR family transcriptional regulator;protein_id=WP_002906776.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2388432 2388983 . + . ID=gene-NLI98_RS11535;Name=NLI98_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11535;old_locus_tag=NLI98_11530 NZ_CP100601.1 Protein Homology CDS 2388432 2388983 . + 0 ID=cds-WP_004180132.1;Parent=gene-NLI98_RS11535;Dbxref=Genbank:WP_004180132.1;Name=WP_004180132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227174.1;locus_tag=NLI98_RS11535;product=adenylate kinase;protein_id=WP_004180132.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2389075 2390082 . + . ID=gene-NLI98_RS11540;Name=NLI98_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11540;old_locus_tag=NLI98_11535 NZ_CP100601.1 Protein Homology CDS 2389075 2390082 . + 0 ID=cds-WP_004151219.1;Parent=gene-NLI98_RS11540;Dbxref=Genbank:WP_004151219.1;Name=WP_004151219.1;Ontology_term=GO:0008150,GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227173.1;locus_tag=NLI98_RS11540;product=MsnO8 family LLM class oxidoreductase;protein_id=WP_004151219.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2390072 2391193 . + . ID=gene-NLI98_RS11545;Name=NLI98_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11545;old_locus_tag=NLI98_11540 NZ_CP100601.1 Protein Homology CDS 2390072 2391193 . + 0 ID=cds-WP_088498217.1;Parent=gene-NLI98_RS11545;Dbxref=Genbank:WP_088498217.1;Name=WP_088498217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227172.1;locus_tag=NLI98_RS11545;product=M20 peptidase aminoacylase family protein;protein_id=WP_088498217.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2391218 2393481 . + . ID=gene-NLI98_RS11550;Name=NLI98_RS11550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS11550;old_locus_tag=NLI98_11545;pseudo=true NZ_CP100601.1 Protein Homology CDS 2391218 2393481 . + 0 ID=cds-NLI98_RS11550;Parent=gene-NLI98_RS11550;Note=This protein belongs to a clade of FMN-dependent monooxygenases%2C within a broader family of flavin-dependent oxidoreductases%2C the luciferase-like monooxygenase (LMM) family%2C some of whose members use coenzyme F420 rather than FMN.%3B frameshifted;Ontology_term=GO:0008152,GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227171.1;locus_tag=NLI98_RS11550;product=NtaA/DmoA family FMN-dependent monooxygenase;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2393493 2394002 . + . ID=gene-NLI98_RS11555;Name=NLI98_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11555;old_locus_tag=NLI98_11550 NZ_CP100601.1 Protein Homology CDS 2393493 2394002 . + 0 ID=cds-WP_008804708.1;Parent=gene-NLI98_RS11555;Dbxref=Genbank:WP_008804708.1;Name=WP_008804708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227170.1;locus_tag=NLI98_RS11555;product=GNAT family N-acetyltransferase;protein_id=WP_008804708.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2394012 2394938 . + . ID=gene-NLI98_RS11560;Name=NLI98_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11560;old_locus_tag=NLI98_11555 NZ_CP100601.1 Protein Homology CDS 2394012 2394938 . + 0 ID=cds-WP_008804709.1;Parent=gene-NLI98_RS11560;Dbxref=Genbank:WP_008804709.1;Name=WP_008804709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227169.1;locus_tag=NLI98_RS11560;product=amino acid ABC transporter permease;protein_id=WP_008804709.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2394922 2395701 . + . ID=gene-NLI98_RS11565;Name=NLI98_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11565;old_locus_tag=NLI98_11560 NZ_CP100601.1 Protein Homology CDS 2394922 2395701 . + 0 ID=cds-WP_002906697.1;Parent=gene-NLI98_RS11565;Dbxref=Genbank:WP_002906697.1;Name=WP_002906697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227168.1;locus_tag=NLI98_RS11565;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002906697.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2395740 2396591 . + . ID=gene-NLI98_RS11570;Name=NLI98_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11570;old_locus_tag=NLI98_11565 NZ_CP100601.1 Protein Homology CDS 2395740 2396591 . + 0 ID=cds-WP_072217435.1;Parent=gene-NLI98_RS11570;Dbxref=Genbank:WP_072217435.1;Name=WP_072217435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227167.1;locus_tag=NLI98_RS11570;product=transporter substrate-binding domain-containing protein;protein_id=WP_072217435.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2396669 2397286 . + . ID=gene-NLI98_RS11575;Name=NLI98_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11575;old_locus_tag=NLI98_11570 NZ_CP100601.1 Protein Homology CDS 2396669 2397286 . + 0 ID=cds-WP_004175955.1;Parent=gene-NLI98_RS11575;Dbxref=Genbank:WP_004175955.1;Name=WP_004175955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227166.1;locus_tag=NLI98_RS11575;product=glutathione S-transferase family protein;protein_id=WP_004175955.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2397357 2397584 . + . ID=gene-NLI98_RS11580;Name=pptA;gbkey=Gene;gene=pptA;gene_biotype=protein_coding;locus_tag=NLI98_RS11580;old_locus_tag=NLI98_11575 NZ_CP100601.1 Protein Homology CDS 2397357 2397584 . + 0 ID=cds-WP_032436127.1;Parent=gene-NLI98_RS11580;Dbxref=Genbank:WP_032436127.1;Name=WP_032436127.1;gbkey=CDS;gene=pptA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227165.1;locus_tag=NLI98_RS11580;product=tautomerase PptA;protein_id=WP_032436127.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2397764 2398060 . + . ID=gene-NLI98_RS11585;Name=NLI98_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11585;old_locus_tag=NLI98_11580 NZ_CP100601.1 Protein Homology CDS 2397764 2398060 . + 0 ID=cds-WP_004148529.1;Parent=gene-NLI98_RS11585;Dbxref=Genbank:WP_004148529.1;Name=WP_004148529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227164.1;locus_tag=NLI98_RS11585;product=helix-turn-helix domain-containing protein;protein_id=WP_004148529.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2398139 2398585 . + . ID=gene-NLI98_RS11590;Name=NLI98_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11590;old_locus_tag=NLI98_11585 NZ_CP100601.1 Protein Homology CDS 2398139 2398585 . + 0 ID=cds-WP_040165344.1;Parent=gene-NLI98_RS11590;Dbxref=Genbank:WP_040165344.1;Name=WP_040165344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004850672.1;locus_tag=NLI98_RS11590;product=hypothetical protein;protein_id=WP_040165344.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2398626 2400242 . - . ID=gene-NLI98_RS11595;Name=NLI98_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11595;old_locus_tag=NLI98_11590 NZ_CP100601.1 Protein Homology CDS 2398626 2400242 . - 0 ID=cds-WP_004151221.1;Parent=gene-NLI98_RS11595;Dbxref=Genbank:WP_004151221.1;Name=WP_004151221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227163.1;locus_tag=NLI98_RS11595;product=carbohydrate porin;protein_id=WP_004151221.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2400286 2401668 . - . ID=gene-NLI98_RS11600;Name=NLI98_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11600;old_locus_tag=NLI98_11595 NZ_CP100601.1 Protein Homology CDS 2400286 2401668 . - 0 ID=cds-WP_004180114.1;Parent=gene-NLI98_RS11600;Dbxref=Genbank:WP_004180114.1;Name=WP_004180114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004214345.1;locus_tag=NLI98_RS11600;product=MFS transporter;protein_id=WP_004180114.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2401692 2403260 . - . ID=gene-NLI98_RS11605;Name=NLI98_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11605;old_locus_tag=NLI98_11600 NZ_CP100601.1 Protein Homology CDS 2401692 2403260 . - 0 ID=cds-WP_004891605.1;Parent=gene-NLI98_RS11605;Dbxref=Genbank:WP_004891605.1;Name=WP_004891605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227161.1;locus_tag=NLI98_RS11605;product=family 78 glycoside hydrolase catalytic domain;protein_id=WP_004891605.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2403465 2404289 . + . ID=gene-NLI98_RS11610;Name=NLI98_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11610;old_locus_tag=NLI98_11605 NZ_CP100601.1 Protein Homology CDS 2403465 2404289 . + 0 ID=cds-WP_004180112.1;Parent=gene-NLI98_RS11610;Dbxref=Genbank:WP_004180112.1;Name=WP_004180112.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227160.1;locus_tag=NLI98_RS11610;product=helix-turn-helix domain-containing protein;protein_id=WP_004180112.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2404344 2404925 . - . ID=gene-NLI98_RS11615;Name=NLI98_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11615;old_locus_tag=NLI98_11610 NZ_CP100601.1 Protein Homology CDS 2404344 2404925 . - 0 ID=cds-WP_004151228.1;Parent=gene-NLI98_RS11615;Dbxref=Genbank:WP_004151228.1;Name=WP_004151228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009307763.1;locus_tag=NLI98_RS11615;product=flavin reductase family protein;protein_id=WP_004151228.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2405137 2405841 . + . ID=gene-NLI98_RS11620;Name=NLI98_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11620;old_locus_tag=NLI98_11615 NZ_CP100601.1 Protein Homology CDS 2405137 2405841 . + 0 ID=cds-WP_004189827.1;Parent=gene-NLI98_RS11620;Dbxref=Genbank:WP_004189827.1;Name=WP_004189827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227158.1;locus_tag=NLI98_RS11620;product=ABC transporter ATP-binding protein;protein_id=WP_004189827.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2405838 2406806 . + . ID=gene-NLI98_RS11625;Name=NLI98_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11625;old_locus_tag=NLI98_11620 NZ_CP100601.1 Protein Homology CDS 2405838 2406806 . + 0 ID=cds-WP_004189830.1;Parent=gene-NLI98_RS11625;Dbxref=Genbank:WP_004189830.1;Name=WP_004189830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227157.1;locus_tag=NLI98_RS11625;product=ABC transporter substrate-binding protein;protein_id=WP_004189830.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2406864 2408519 . + . ID=gene-NLI98_RS11630;Name=NLI98_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11630;old_locus_tag=NLI98_11625 NZ_CP100601.1 Protein Homology CDS 2406864 2408519 . + 0 ID=cds-WP_088498220.1;Parent=gene-NLI98_RS11630;Dbxref=Genbank:WP_088498220.1;Name=WP_088498220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227156.1;locus_tag=NLI98_RS11630;product=iron ABC transporter permease;protein_id=WP_088498220.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2408596 2409441 . + . ID=gene-NLI98_RS11635;Name=nhoA;gbkey=Gene;gene=nhoA;gene_biotype=protein_coding;locus_tag=NLI98_RS11635;old_locus_tag=NLI98_11630 NZ_CP100601.1 Protein Homology CDS 2408596 2409441 . + 0 ID=cds-WP_004180108.1;Parent=gene-NLI98_RS11635;Dbxref=Genbank:WP_004180108.1;Name=WP_004180108.1;Ontology_term=GO:0016407;gbkey=CDS;gene=nhoA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004112839.1;locus_tag=NLI98_RS11635;product=N-hydroxyarylamine O-acetyltransferase;protein_id=WP_004180108.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2409992 2410672 . - . ID=gene-NLI98_RS11640;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=NLI98_RS11640;old_locus_tag=NLI98_11635 NZ_CP100601.1 Protein Homology CDS 2409992 2410672 . - 0 ID=cds-WP_004175972.1;Parent=gene-NLI98_RS11640;Dbxref=Genbank:WP_004175972.1;Name=WP_004175972.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227154.1;locus_tag=NLI98_RS11640;product=respiratory nitrate reductase subunit gamma;protein_id=WP_004175972.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2410669 2411364 . - . ID=gene-NLI98_RS11645;Name=narW;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=NLI98_RS11645;old_locus_tag=NLI98_11640 NZ_CP100601.1 Protein Homology CDS 2410669 2411364 . - 0 ID=cds-WP_088498221.1;Parent=gene-NLI98_RS11645;Dbxref=Genbank:WP_088498221.1;Name=WP_088498221.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narW;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227153.1;locus_tag=NLI98_RS11645;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_088498221.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2411364 2412908 . - . ID=gene-NLI98_RS11650;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=NLI98_RS11650;old_locus_tag=NLI98_11645 NZ_CP100601.1 Protein Homology CDS 2411364 2412908 . - 0 ID=cds-WP_004148517.1;Parent=gene-NLI98_RS11650;Dbxref=Genbank:WP_004148517.1;Name=WP_004148517.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460537.1;locus_tag=NLI98_RS11650;product=nitrate reductase subunit beta;protein_id=WP_004148517.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2412905 2416645 . - . ID=gene-NLI98_RS11655;Name=NLI98_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11655;old_locus_tag=NLI98_11650 NZ_CP100601.1 Protein Homology CDS 2412905 2416645 . - 0 ID=cds-WP_088498222.1;Parent=gene-NLI98_RS11655;Dbxref=Genbank:WP_088498222.1;Name=WP_088498222.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227150.1;locus_tag=NLI98_RS11655;product=nitrate reductase subunit alpha;protein_id=WP_088498222.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2416760 2418142 . - . ID=gene-NLI98_RS11660;Name=NLI98_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11660;old_locus_tag=NLI98_11655 NZ_CP100601.1 Protein Homology CDS 2416760 2418142 . - 0 ID=cds-WP_004151231.1;Parent=gene-NLI98_RS11660;Dbxref=Genbank:WP_004151231.1;Name=WP_004151231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227149.1;locus_tag=NLI98_RS11660;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_004151231.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2418317 2418892 . - . ID=gene-NLI98_RS11665;Name=NLI98_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11665;old_locus_tag=NLI98_11660 NZ_CP100601.1 Protein Homology CDS 2418317 2418892 . - 0 ID=cds-WP_004888643.1;Parent=gene-NLI98_RS11665;Dbxref=Genbank:WP_004888643.1;Name=WP_004888643.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227148.1;locus_tag=NLI98_RS11665;product=TetR family transcriptional regulator;protein_id=WP_004888643.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2419016 2420515 . + . ID=gene-NLI98_RS11670;Name=kmrA;gbkey=Gene;gene=kmrA;gene_biotype=protein_coding;locus_tag=NLI98_RS11670;old_locus_tag=NLI98_11665 NZ_CP100601.1 Protein Homology CDS 2419016 2420515 . + 0 ID=cds-WP_023282635.1;Parent=gene-NLI98_RS11670;Dbxref=Genbank:WP_023282635.1;Name=WP_023282635.1;gbkey=CDS;gene=kmrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227147.1;locus_tag=NLI98_RS11670;product=efflux MFS transporter KmrA;protein_id=WP_023282635.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2420510 2421400 . - . ID=gene-NLI98_RS11675;Name=NLI98_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11675;old_locus_tag=NLI98_11670 NZ_CP100601.1 Protein Homology CDS 2420510 2421400 . - 0 ID=cds-WP_009485870.1;Parent=gene-NLI98_RS11675;Dbxref=Genbank:WP_009485870.1;Name=WP_009485870.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227146.1;locus_tag=NLI98_RS11675;product=helix-turn-helix domain-containing protein;protein_id=WP_009485870.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2421516 2422679 . + . ID=gene-NLI98_RS11680;Name=NLI98_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11680;old_locus_tag=NLI98_11675 NZ_CP100601.1 Protein Homology CDS 2421516 2422679 . + 0 ID=cds-WP_072143290.1;Parent=gene-NLI98_RS11680;Dbxref=Genbank:WP_072143290.1;Name=WP_072143290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227145.1;locus_tag=NLI98_RS11680;product=muconate cycloisomerase family protein;protein_id=WP_072143290.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2422699 2422989 . + . ID=gene-NLI98_RS11685;Name=catC;gbkey=Gene;gene=catC;gene_biotype=protein_coding;locus_tag=NLI98_RS11685;old_locus_tag=NLI98_11680 NZ_CP100601.1 Protein Homology CDS 2422699 2422989 . + 0 ID=cds-WP_002906471.1;Parent=gene-NLI98_RS11685;Dbxref=Genbank:WP_002906471.1;Name=WP_002906471.1;Ontology_term=GO:0042952,GO:0016159;gbkey=CDS;gene=catC;go_function=muconolactone delta-isomerase activity|0016159||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227144.1;locus_tag=NLI98_RS11685;product=muconolactone Delta-isomerase;protein_id=WP_002906471.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2423056 2423982 . + . ID=gene-NLI98_RS11690;Name=catA;gbkey=Gene;gene=catA;gene_biotype=protein_coding;locus_tag=NLI98_RS11690;old_locus_tag=NLI98_11685 NZ_CP100601.1 Protein Homology CDS 2423056 2423982 . + 0 ID=cds-WP_038431534.1;Parent=gene-NLI98_RS11690;Dbxref=Genbank:WP_038431534.1;Name=WP_038431534.1;Ontology_term=GO:0019615,GO:0018576;gbkey=CDS;gene=catA;go_function=catechol 1%2C2-dioxygenase activity|0018576||IEA;go_process=catechol catabolic process%2C ortho-cleavage|0019615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227143.1;locus_tag=NLI98_RS11690;product=catechol 1%2C2-dioxygenase;protein_id=WP_038431534.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2424092 2425474 . + . ID=gene-NLI98_RS11695;Name=NLI98_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11695;old_locus_tag=NLI98_11690 NZ_CP100601.1 Protein Homology CDS 2424092 2425474 . + 0 ID=cds-WP_023341627.1;Parent=gene-NLI98_RS11695;Dbxref=Genbank:WP_023341627.1;Name=WP_023341627.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227142.1;locus_tag=NLI98_RS11695;product=Rieske 2Fe-2S domain-containing protein;protein_id=WP_023341627.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2425474 2425959 . + . ID=gene-NLI98_RS11700;Name=benB;gbkey=Gene;gene=benB;gene_biotype=protein_coding;locus_tag=NLI98_RS11700;old_locus_tag=NLI98_11695 NZ_CP100601.1 Protein Homology CDS 2425474 2425959 . + 0 ID=cds-WP_004180096.1;Parent=gene-NLI98_RS11700;Dbxref=Genbank:WP_004180096.1;Name=WP_004180096.1;Ontology_term=GO:0006725;gbkey=CDS;gene=benB;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227141.1;locus_tag=NLI98_RS11700;product=benzoate 1%2C2-dioxygenase small subunit;protein_id=WP_004180096.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2425969 2426985 . + . ID=gene-NLI98_RS11705;Name=benC;gbkey=Gene;gene=benC;gene_biotype=protein_coding;locus_tag=NLI98_RS11705;old_locus_tag=NLI98_11700 NZ_CP100601.1 Protein Homology CDS 2425969 2426985 . + 0 ID=cds-WP_088498223.1;Parent=gene-NLI98_RS11705;Dbxref=Genbank:WP_088498223.1;Name=WP_088498223.1;gbkey=CDS;gene=benC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227140.1;locus_tag=NLI98_RS11705;product=benzoate 1%2C2-dioxygenase electron transfer component BenC;protein_id=WP_088498223.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2426995 2427768 . + . ID=gene-NLI98_RS11710;Name=benD;gbkey=Gene;gene=benD;gene_biotype=protein_coding;locus_tag=NLI98_RS11710;old_locus_tag=NLI98_11705 NZ_CP100601.1 Protein Homology CDS 2426995 2427768 . + 0 ID=cds-WP_004143751.1;Parent=gene-NLI98_RS11710;Dbxref=Genbank:WP_004143751.1;Name=WP_004143751.1;gbkey=CDS;gene=benD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227139.1;locus_tag=NLI98_RS11710;product=benzoate diol dehydrogenase BenD;protein_id=WP_004143751.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2427765 2428643 . - . ID=gene-NLI98_RS11715;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=NLI98_RS11715;old_locus_tag=NLI98_11710 NZ_CP100601.1 Protein Homology CDS 2427765 2428643 . - 0 ID=cds-WP_002906464.1;Parent=gene-NLI98_RS11715;Dbxref=Genbank:WP_002906464.1;Name=WP_002906464.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yddG;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227138.1;locus_tag=NLI98_RS11715;product=aromatic amino acid DMT transporter YddG;protein_id=WP_002906464.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2428869 2431916 . + . ID=gene-NLI98_RS11720;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=NLI98_RS11720;old_locus_tag=NLI98_11715 NZ_CP100601.1 Protein Homology CDS 2428869 2431916 . + 0 ID=cds-WP_102024127.1;Parent=gene-NLI98_RS11720;Dbxref=Genbank:WP_102024127.1;Name=WP_102024127.1;Ontology_term=GO:0015942,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460529.1;locus_tag=NLI98_RS11720;product=formate dehydrogenase-N subunit alpha;protein_id=WP_102024127.1;transl_except=(pos:2429454..2429456%2Caa:Sec);transl_table=11 NZ_CP100601.1 RefSeq gene 2431928 2432812 . + . ID=gene-NLI98_RS11725;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=NLI98_RS11725;old_locus_tag=NLI98_11720 NZ_CP100601.1 Protein Homology CDS 2431928 2432812 . + 0 ID=cds-WP_264452306.1;Parent=gene-NLI98_RS11725;Dbxref=Genbank:WP_264452306.1;Name=WP_264452306.1;Ontology_term=GO:0045333,GO:0008863;gbkey=CDS;gene=fdxH;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=cellular respiration|0045333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227135.1;locus_tag=NLI98_RS11725;product=formate dehydrogenase subunit beta;protein_id=WP_264452306.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2432805 2433461 . + . ID=gene-NLI98_RS11730;Name=fdnI;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=NLI98_RS11730;old_locus_tag=NLI98_11725 NZ_CP100601.1 Protein Homology CDS 2432805 2433461 . + 0 ID=cds-WP_004175992.1;Parent=gene-NLI98_RS11730;Dbxref=Genbank:WP_004175992.1;Name=WP_004175992.1;gbkey=CDS;gene=fdnI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227134.1;locus_tag=NLI98_RS11730;product=formate dehydrogenase-N subunit gamma;protein_id=WP_004175992.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2433514 2433840 . - . ID=gene-NLI98_RS11735;Name=NLI98_RS11735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS11735;old_locus_tag=NLI98_11730;pseudo=true NZ_CP100601.1 Protein Homology CDS 2433514 2433840 . - 0 ID=cds-NLI98_RS11735;Parent=gene-NLI98_RS11735;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202676.1;locus_tag=NLI98_RS11735;product=CcdB family protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2433837 2434022 . - . ID=gene-NLI98_RS11740;Name=NLI98_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11740;old_locus_tag=NLI98_11735 NZ_CP100601.1 Protein Homology CDS 2433837 2434022 . - 0 ID=cds-WP_004175994.1;Parent=gene-NLI98_RS11740;Dbxref=Genbank:WP_004175994.1;Name=WP_004175994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227133.1;locus_tag=NLI98_RS11740;product=hypothetical protein;protein_id=WP_004175994.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2434201 2435019 . - . ID=gene-NLI98_RS11745;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=NLI98_RS11745;old_locus_tag=NLI98_11740 NZ_CP100601.1 Protein Homology CDS 2434201 2435019 . - 0 ID=cds-WP_004180084.1;Parent=gene-NLI98_RS11745;Dbxref=Genbank:WP_004180084.1;Name=WP_004180084.1;Ontology_term=GO:0006793,GO:0008976,GO:0005575;gbkey=CDS;gene=ppk2;go_component=cellular_component|0005575||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227132.1;locus_tag=NLI98_RS11745;product=polyphosphate kinase 2;protein_id=WP_004180084.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2435087 2435527 . - . ID=gene-NLI98_RS11750;Name=NLI98_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11750;old_locus_tag=NLI98_11745 NZ_CP100601.1 Protein Homology CDS 2435087 2435527 . - 0 ID=cds-WP_002906451.1;Parent=gene-NLI98_RS11750;Dbxref=Genbank:WP_002906451.1;Name=WP_002906451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227131.1;locus_tag=NLI98_RS11750;product=VOC family protein;protein_id=WP_002906451.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2435792 2436946 . + . ID=gene-NLI98_RS11755;Name=araJ;gbkey=Gene;gene=araJ;gene_biotype=protein_coding;locus_tag=NLI98_RS11755;old_locus_tag=NLI98_11750 NZ_CP100601.1 Protein Homology CDS 2435792 2436946 . + 0 ID=cds-WP_002906449.1;Parent=gene-NLI98_RS11755;Dbxref=Genbank:WP_002906449.1;Name=WP_002906449.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=araJ;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227130.1;locus_tag=NLI98_RS11755;product=MFS transporter AraJ;protein_id=WP_002906449.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2436953 2438044 . - . ID=gene-NLI98_RS11760;Name=NLI98_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11760;old_locus_tag=NLI98_11755 NZ_CP100601.1 Protein Homology CDS 2436953 2438044 . - 0 ID=cds-WP_020802157.1;Parent=gene-NLI98_RS11760;Dbxref=Genbank:WP_020802157.1;Name=WP_020802157.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227129.1;locus_tag=NLI98_RS11760;product=alkylhydroperoxidase domain protein;protein_id=WP_020802157.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2438054 2439040 . - . ID=gene-NLI98_RS11765;Name=NLI98_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11765;old_locus_tag=NLI98_11760 NZ_CP100601.1 Protein Homology CDS 2438054 2439040 . - 0 ID=cds-WP_004200040.1;Parent=gene-NLI98_RS11765;Dbxref=Genbank:WP_004200040.1;Name=WP_004200040.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227128.1;locus_tag=NLI98_RS11765;product=putative FMN-dependent luciferase-like monooxygenase;protein_id=WP_004200040.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2439040 2440656 . - . ID=gene-NLI98_RS11770;Name=NLI98_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11770;old_locus_tag=NLI98_11765 NZ_CP100601.1 Protein Homology CDS 2439040 2440656 . - 0 ID=cds-WP_032418914.1;Parent=gene-NLI98_RS11770;Dbxref=Genbank:WP_032418914.1;Name=WP_032418914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227127.1;locus_tag=NLI98_RS11770;product=ABC transporter ATP-binding protein;protein_id=WP_032418914.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2440653 2441501 . - . ID=gene-NLI98_RS11775;Name=NLI98_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11775;old_locus_tag=NLI98_11770 NZ_CP100601.1 Protein Homology CDS 2440653 2441501 . - 0 ID=cds-WP_040222431.1;Parent=gene-NLI98_RS11775;Dbxref=Genbank:WP_040222431.1;Name=WP_040222431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227126.1;locus_tag=NLI98_RS11775;product=ABC transporter permease;protein_id=WP_040222431.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2441498 2442442 . - . ID=gene-NLI98_RS11780;Name=NLI98_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11780;old_locus_tag=NLI98_11775 NZ_CP100601.1 Protein Homology CDS 2441498 2442442 . - 0 ID=cds-WP_137034375.1;Parent=gene-NLI98_RS11780;Dbxref=Genbank:WP_137034375.1;Name=WP_137034375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227125.1;locus_tag=NLI98_RS11780;product=ABC transporter permease;protein_id=WP_137034375.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2442453 2444075 . - . ID=gene-NLI98_RS11785;Name=NLI98_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11785;old_locus_tag=NLI98_11780 NZ_CP100601.1 Protein Homology CDS 2442453 2444075 . - 0 ID=cds-WP_088498225.1;Parent=gene-NLI98_RS11785;Dbxref=Genbank:WP_088498225.1;Name=WP_088498225.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227124.1;locus_tag=NLI98_RS11785;product=TIGR04028 family ABC transporter substrate-binding protein;protein_id=WP_088498225.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2444245 2445255 . - . ID=gene-NLI98_RS11790;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=NLI98_RS11790;old_locus_tag=NLI98_11785 NZ_CP100601.1 Protein Homology CDS 2444245 2445255 . - 0 ID=cds-WP_002906221.1;Parent=gene-NLI98_RS11790;Dbxref=Genbank:WP_002906221.1;Name=WP_002906221.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227123.1;locus_tag=NLI98_RS11790;product=alcohol dehydrogenase AdhP;protein_id=WP_002906221.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2445508 2446107 . + . ID=gene-NLI98_RS11795;Name=NLI98_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11795;old_locus_tag=NLI98_11790 NZ_CP100601.1 Protein Homology CDS 2445508 2446107 . + 0 ID=cds-WP_004176015.1;Parent=gene-NLI98_RS11795;Dbxref=Genbank:WP_004176015.1;Name=WP_004176015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004180075.1;locus_tag=NLI98_RS11795;product=inorganic diphosphatase;protein_id=WP_004176015.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2446344 2446559 . + . ID=gene-NLI98_RS11800;Name=NLI98_RS11800;end_range=2446559,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS11800;partial=true;pseudo=true NZ_CP100601.1 Protein Homology CDS 2446344 2446559 . + 0 ID=cds-NLI98_RS11800;Parent=gene-NLI98_RS11800;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2446559,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024854.2;locus_tag=NLI98_RS11800;partial=true;product=MarR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2446827 2446979 . - . ID=gene-NLI98_RS11805;Name=NLI98_RS11805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS11805;old_locus_tag=NLI98_11800;partial=true;pseudo=true;start_range=.,2446827 NZ_CP100601.1 Protein Homology CDS 2446827 2446979 . - 0 ID=cds-NLI98_RS11805;Parent=gene-NLI98_RS11805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227119.1;locus_tag=NLI98_RS11805;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2446827;transl_table=11 NZ_CP100601.1 RefSeq gene 2446911 2447228 . + . ID=gene-NLI98_RS11810;Name=NLI98_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11810;old_locus_tag=NLI98_11805 NZ_CP100601.1 Protein Homology CDS 2446911 2447228 . + 0 ID=cds-WP_223174638.1;Parent=gene-NLI98_RS11810;Dbxref=Genbank:WP_223174638.1;Name=WP_223174638.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025054.2;locus_tag=NLI98_RS11810;product=GNAT family N-acetyltransferase;protein_id=WP_223174638.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2447265 2448980 . - . ID=gene-NLI98_RS11815;Name=NLI98_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11815;old_locus_tag=NLI98_11810 NZ_CP100601.1 Protein Homology CDS 2447265 2448980 . - 0 ID=cds-WP_088498226.1;Parent=gene-NLI98_RS11815;Dbxref=Genbank:WP_088498226.1;Name=WP_088498226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227117.1;locus_tag=NLI98_RS11815;product=ATP-binding cassette domain-containing protein;protein_id=WP_088498226.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2449377 2450084 . - . ID=gene-NLI98_RS11820;Name=NLI98_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11820;old_locus_tag=NLI98_11815 NZ_CP100601.1 Protein Homology CDS 2449377 2450084 . - 0 ID=cds-WP_088498227.1;Parent=gene-NLI98_RS11820;Dbxref=Genbank:WP_088498227.1;Name=WP_088498227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803475.1;locus_tag=NLI98_RS11820;product=glycosyl transferase;protein_id=WP_088498227.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2450268 2451965 . - . ID=gene-NLI98_RS11825;Name=NLI98_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11825;old_locus_tag=NLI98_11820 NZ_CP100601.1 Protein Homology CDS 2450268 2451965 . - 0 ID=cds-WP_002906125.1;Parent=gene-NLI98_RS11825;Dbxref=Genbank:WP_002906125.1;Name=WP_002906125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227114.1;locus_tag=NLI98_RS11825;product=NAD-dependent malic enzyme;protein_id=WP_002906125.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2452022 2452150 . + . ID=gene-NLI98_RS11830;Name=NLI98_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11830;old_locus_tag=NLI98_11825 NZ_CP100601.1 Protein Homology CDS 2452022 2452150 . + 0 ID=cds-WP_002906122.1;Parent=gene-NLI98_RS11830;Dbxref=Genbank:WP_002906122.1;Name=WP_002906122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227113.1;locus_tag=NLI98_RS11830;product=hypothetical protein;protein_id=WP_002906122.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2452147 2452287 . - . ID=gene-NLI98_RS11835;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=NLI98_RS11835;old_locus_tag=NLI98_11830 NZ_CP100601.1 Protein Homology CDS 2452147 2452287 . - 0 ID=cds-WP_004143727.1;Parent=gene-NLI98_RS11835;Dbxref=Genbank:WP_004143727.1;Name=WP_004143727.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227112.1;locus_tag=NLI98_RS11835;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_004143727.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2452465 2453316 . - . ID=gene-NLI98_RS11840;Name=NLI98_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11840;old_locus_tag=NLI98_11835 NZ_CP100601.1 Protein Homology CDS 2452465 2453316 . - 0 ID=cds-WP_022631274.1;Parent=gene-NLI98_RS11840;Dbxref=Genbank:WP_022631274.1;Name=WP_022631274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227111.1;locus_tag=NLI98_RS11840;product=Vmh family MBL fold metallo-hydrolase;protein_id=WP_022631274.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2453430 2454323 . + . ID=gene-NLI98_RS11845;Name=NLI98_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11845;old_locus_tag=NLI98_11840 NZ_CP100601.1 Protein Homology CDS 2453430 2454323 . + 0 ID=cds-WP_004184171.1;Parent=gene-NLI98_RS11845;Dbxref=Genbank:WP_004184171.1;Name=WP_004184171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227110.1;locus_tag=NLI98_RS11845;product=LysR family transcriptional regulator;protein_id=WP_004184171.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2454391 2454636 . - . ID=gene-NLI98_RS11850;Name=NLI98_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11850;old_locus_tag=NLI98_11845 NZ_CP100601.1 Protein Homology CDS 2454391 2454636 . - 0 ID=cds-WP_004180069.1;Parent=gene-NLI98_RS11850;Dbxref=Genbank:WP_004180069.1;Name=WP_004180069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227109.1;locus_tag=NLI98_RS11850;product=YmjA family protein;protein_id=WP_004180069.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2454833 2455747 . - . ID=gene-NLI98_RS11855;Name=NLI98_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11855;old_locus_tag=NLI98_11850 NZ_CP100601.1 Protein Homology CDS 2454833 2455747 . - 0 ID=cds-WP_004151242.1;Parent=gene-NLI98_RS11855;Dbxref=Genbank:WP_004151242.1;Name=WP_004151242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227108.1;locus_tag=NLI98_RS11855;product=SDR family oxidoreductase;protein_id=WP_004151242.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2456404 2456589 . + . ID=gene-NLI98_RS11860;Name=NLI98_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11860;old_locus_tag=NLI98_11855 NZ_CP100601.1 Protein Homology CDS 2456404 2456589 . + 0 ID=cds-WP_004143718.1;Parent=gene-NLI98_RS11860;Dbxref=Genbank:WP_004143718.1;Name=WP_004143718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227107.1;locus_tag=NLI98_RS11860;product=general stress protein;protein_id=WP_004143718.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2456959 2457174 . + . ID=gene-NLI98_RS11865;Name=NLI98_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11865;old_locus_tag=NLI98_11860 NZ_CP100601.1 Protein Homology CDS 2456959 2457174 . + 0 ID=cds-WP_004143717.1;Parent=gene-NLI98_RS11865;Dbxref=Genbank:WP_004143717.1;Name=WP_004143717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227106.1;locus_tag=NLI98_RS11865;product=hypothetical protein;protein_id=WP_004143717.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2457198 2457704 . + . ID=gene-NLI98_RS11870;Name=NLI98_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11870;old_locus_tag=NLI98_11865 NZ_CP100601.1 Protein Homology CDS 2457198 2457704 . + 0 ID=cds-WP_004151243.1;Parent=gene-NLI98_RS11870;Dbxref=Genbank:WP_004151243.1;Name=WP_004151243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227105.1;locus_tag=NLI98_RS11870;product=ferritin-like domain-containing protein;protein_id=WP_004151243.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2457721 2457903 . + . ID=gene-NLI98_RS11875;Name=NLI98_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11875;old_locus_tag=NLI98_11870 NZ_CP100601.1 Protein Homology CDS 2457721 2457903 . + 0 ID=cds-WP_064155950.1;Parent=gene-NLI98_RS11875;Dbxref=Genbank:WP_064155950.1;Name=WP_064155950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227104.1;locus_tag=NLI98_RS11875;product=hypothetical protein;protein_id=WP_064155950.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2457943 2459568 . + . ID=gene-NLI98_RS11880;Name=NLI98_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11880;old_locus_tag=NLI98_11875 NZ_CP100601.1 Protein Homology CDS 2457943 2459568 . + 0 ID=cds-WP_088498228.1;Parent=gene-NLI98_RS11880;Dbxref=Genbank:WP_088498228.1;Name=WP_088498228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227103.1;locus_tag=NLI98_RS11880;product=alpha-amylase family protein;protein_id=WP_088498228.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2459565 2460560 . - . ID=gene-NLI98_RS11885;Name=NLI98_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11885;old_locus_tag=NLI98_11880 NZ_CP100601.1 Protein Homology CDS 2459565 2460560 . - 0 ID=cds-WP_004151245.1;Parent=gene-NLI98_RS11885;Dbxref=Genbank:WP_004151245.1;Name=WP_004151245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004148483.1;locus_tag=NLI98_RS11885;product=SDR family oxidoreductase;protein_id=WP_004151245.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2460879 2461325 . - . ID=gene-NLI98_RS11890;Name=NLI98_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11890;old_locus_tag=NLI98_11885 NZ_CP100601.1 Protein Homology CDS 2460879 2461325 . - 0 ID=cds-WP_004148482.1;Parent=gene-NLI98_RS11890;Dbxref=Genbank:WP_004148482.1;Name=WP_004148482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227099.1;locus_tag=NLI98_RS11890;product=DUF421 domain-containing protein;protein_id=WP_004148482.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2461334 2461837 . - . ID=gene-NLI98_RS11895;Name=NLI98_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11895;old_locus_tag=NLI98_11890 NZ_CP100601.1 Protein Homology CDS 2461334 2461837 . - 0 ID=cds-WP_004891705.1;Parent=gene-NLI98_RS11895;Dbxref=Genbank:WP_004891705.1;Name=WP_004891705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227098.1;locus_tag=NLI98_RS11895;product=hypothetical protein;protein_id=WP_004891705.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2461982 2462386 . + . ID=gene-NLI98_RS11900;Name=NLI98_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11900;old_locus_tag=NLI98_11895 NZ_CP100601.1 Protein Homology CDS 2461982 2462386 . + 0 ID=cds-WP_002906035.1;Parent=gene-NLI98_RS11900;Dbxref=Genbank:WP_002906035.1;Name=WP_002906035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015874836.1;locus_tag=NLI98_RS11900;product=YdeI family stress tolerance OB fold protein;protein_id=WP_002906035.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2462402 2462548 . + . ID=gene-NLI98_RS11905;Name=NLI98_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11905;old_locus_tag=NLI98_11900 NZ_CP100601.1 Protein Homology CDS 2462402 2462548 . + 0 ID=cds-WP_002906033.1;Parent=gene-NLI98_RS11905;Dbxref=Genbank:WP_002906033.1;Name=WP_002906033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227096.1;locus_tag=NLI98_RS11905;product=hypothetical protein;protein_id=WP_002906033.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2462672 2463103 . + . ID=gene-NLI98_RS11910;Name=NLI98_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11910;old_locus_tag=NLI98_11905 NZ_CP100601.1 Protein Homology CDS 2462672 2463103 . + 0 ID=cds-WP_002906030.1;Parent=gene-NLI98_RS11910;Dbxref=Genbank:WP_002906030.1;Name=WP_002906030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227095.1;locus_tag=NLI98_RS11910;product=OsmC family protein;protein_id=WP_002906030.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2463208 2464077 . + . ID=gene-NLI98_RS11915;Name=NLI98_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11915;old_locus_tag=NLI98_11910 NZ_CP100601.1 Protein Homology CDS 2463208 2464077 . + 0 ID=cds-WP_088498229.1;Parent=gene-NLI98_RS11915;Dbxref=Genbank:WP_088498229.1;Name=WP_088498229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227094.1;locus_tag=NLI98_RS11915;product=oxygenase MpaB family protein;protein_id=WP_088498229.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2464079 2464765 . - . ID=gene-NLI98_RS11920;Name=NLI98_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11920;old_locus_tag=NLI98_11915 NZ_CP100601.1 Protein Homology CDS 2464079 2464765 . - 0 ID=cds-WP_004184165.1;Parent=gene-NLI98_RS11920;Dbxref=Genbank:WP_004184165.1;Name=WP_004184165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227093.1;locus_tag=NLI98_RS11920;product=ABC transporter substrate-binding protein;protein_id=WP_004184165.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2464755 2464937 . - . ID=gene-NLI98_RS11925;Name=NLI98_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11925;old_locus_tag=NLI98_11920 NZ_CP100601.1 Protein Homology CDS 2464755 2464937 . - 0 ID=cds-WP_040244767.1;Parent=gene-NLI98_RS11925;Dbxref=Genbank:WP_040244767.1;Name=WP_040244767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227092.1;locus_tag=NLI98_RS11925;product=hypothetical protein;protein_id=WP_040244767.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2464987 2465910 . + . ID=gene-NLI98_RS11930;Name=NLI98_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11930;old_locus_tag=NLI98_11925 NZ_CP100601.1 Protein Homology CDS 2464987 2465910 . + 0 ID=cds-WP_004151892.1;Parent=gene-NLI98_RS11930;Dbxref=Genbank:WP_004151892.1;Name=WP_004151892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227091.1;locus_tag=NLI98_RS11930;product=cation diffusion facilitator family transporter;protein_id=WP_004151892.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2466160 2467077 . + . ID=gene-NLI98_RS11935;Name=NLI98_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11935;old_locus_tag=NLI98_11930 NZ_CP100601.1 Protein Homology CDS 2466160 2467077 . + 0 ID=cds-WP_080882493.1;Parent=gene-NLI98_RS11935;Dbxref=Genbank:WP_080882493.1;Name=WP_080882493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227090.1;locus_tag=NLI98_RS11935;product=ibestrophin;protein_id=WP_080882493.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2467394 2469694 . + . ID=gene-NLI98_RS11940;Name=NLI98_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11940;old_locus_tag=NLI98_11935 NZ_CP100601.1 Protein Homology CDS 2467394 2469694 . + 0 ID=cds-WP_088498230.1;Parent=gene-NLI98_RS11940;Dbxref=Genbank:WP_088498230.1;Name=WP_088498230.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227089.1;locus_tag=NLI98_RS11940;product=FdhF/YdeP family oxidoreductase;protein_id=WP_088498230.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2469844 2470725 . + . ID=gene-NLI98_RS11945;Name=NLI98_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11945;old_locus_tag=NLI98_11940 NZ_CP100601.1 Protein Homology CDS 2469844 2470725 . + 0 ID=cds-WP_002906016.1;Parent=gene-NLI98_RS11945;Dbxref=Genbank:WP_002906016.1;Name=WP_002906016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227088.1;locus_tag=NLI98_RS11945;product=LysR family transcriptional regulator;protein_id=WP_002906016.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2471129 2472364 . + . ID=gene-NLI98_RS11950;Name=NLI98_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11950;old_locus_tag=NLI98_11945 NZ_CP100601.1 Protein Homology CDS 2471129 2472364 . + 0 ID=cds-WP_014343100.1;Parent=gene-NLI98_RS11950;Dbxref=Genbank:WP_014343100.1;Name=WP_014343100.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227087.1;locus_tag=NLI98_RS11950;product=PTS transporter subunit EIIC;protein_id=WP_014343100.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2472415 2475027 . + . ID=gene-NLI98_RS11955;Name=NLI98_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11955;old_locus_tag=NLI98_11950 NZ_CP100601.1 Protein Homology CDS 2472415 2475027 . + 0 ID=cds-WP_102024126.1;Parent=gene-NLI98_RS11955;Dbxref=Genbank:WP_102024126.1;Name=WP_102024126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227086.1;locus_tag=NLI98_RS11955;product=family 78 glycoside hydrolase catalytic domain;protein_id=WP_102024126.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2475070 2476014 . + . ID=gene-NLI98_RS11960;Name=NLI98_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11960;old_locus_tag=NLI98_11955 NZ_CP100601.1 Protein Homology CDS 2475070 2476014 . + 0 ID=cds-WP_004180047.1;Parent=gene-NLI98_RS11960;Dbxref=Genbank:WP_004180047.1;Name=WP_004180047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227085.1;locus_tag=NLI98_RS11960;product=helix-turn-helix domain-containing protein;protein_id=WP_004180047.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2476201 2477484 . + . ID=gene-NLI98_RS11965;Name=NLI98_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11965;old_locus_tag=NLI98_11960 NZ_CP100601.1 Protein Homology CDS 2476201 2477484 . + 0 ID=cds-WP_088498231.1;Parent=gene-NLI98_RS11965;Dbxref=Genbank:WP_088498231.1;Name=WP_088498231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020802135.1;locus_tag=NLI98_RS11965;product=carbohydrate porin;protein_id=WP_088498231.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2477517 2478472 . + . ID=gene-NLI98_RS11970;Name=NLI98_RS11970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS11970;old_locus_tag=NLI98_11965;pseudo=true NZ_CP100601.1 Protein Homology CDS 2477517 2478472 . + 0 ID=cds-NLI98_RS11970;Parent=gene-NLI98_RS11970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227082.1;locus_tag=NLI98_RS11970;product=alpha/beta hydrolase;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2478508 2478831 . + . ID=gene-NLI98_RS11975;Name=NLI98_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11975;old_locus_tag=NLI98_11970 NZ_CP100601.1 Protein Homology CDS 2478508 2478831 . + 0 ID=cds-WP_004180042.1;Parent=gene-NLI98_RS11975;Dbxref=Genbank:WP_004180042.1;Name=WP_004180042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227081.1;locus_tag=NLI98_RS11975;product=PTS sugar transporter subunit IIB;protein_id=WP_004180042.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2478841 2479155 . + . ID=gene-NLI98_RS11980;Name=NLI98_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11980;old_locus_tag=NLI98_11975 NZ_CP100601.1 Protein Homology CDS 2478841 2479155 . + 0 ID=cds-WP_020802112.1;Parent=gene-NLI98_RS11980;Dbxref=Genbank:WP_020802112.1;Name=WP_020802112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227080.1;locus_tag=NLI98_RS11980;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_020802112.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2479196 2480602 . - . ID=gene-NLI98_RS11985;Name=NLI98_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11985;old_locus_tag=NLI98_11980 NZ_CP100601.1 Protein Homology CDS 2479196 2480602 . - 0 ID=cds-WP_004143698.1;Parent=gene-NLI98_RS11985;Dbxref=Genbank:WP_004143698.1;Name=WP_004143698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227079.1;locus_tag=NLI98_RS11985;product=MFS transporter;protein_id=WP_004143698.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2481190 2481870 . + . ID=gene-NLI98_RS11990;Name=NLI98_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS11990;old_locus_tag=NLI98_11985 NZ_CP100601.1 Protein Homology CDS 2481190 2481870 . + 0 ID=cds-WP_002906011.1;Parent=gene-NLI98_RS11990;Dbxref=Genbank:WP_002906011.1;Name=WP_002906011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227078.1;locus_tag=NLI98_RS11990;product=MgtC family protein;protein_id=WP_002906011.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2481968 2483029 . + . ID=gene-NLI98_RS11995;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=NLI98_RS11995;old_locus_tag=NLI98_11990 NZ_CP100601.1 Protein Homology CDS 2481968 2483029 . + 0 ID=cds-WP_159110637.1;Parent=gene-NLI98_RS11995;Dbxref=Genbank:WP_159110637.1;Name=WP_159110637.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004176048.1;locus_tag=NLI98_RS11995;product=cell division protein ZapE;protein_id=WP_159110637.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2483064 2485241 . - . ID=gene-NLI98_RS12000;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=NLI98_RS12000;old_locus_tag=NLI98_11995 NZ_CP100601.1 Protein Homology CDS 2483064 2485241 . - 0 ID=cds-WP_004176050.1;Parent=gene-NLI98_RS12000;Dbxref=Genbank:WP_004176050.1;Name=WP_004176050.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227075.1;locus_tag=NLI98_RS12000;product=catalase/peroxidase HPI;protein_id=WP_004176050.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2485510 2486442 . - . ID=gene-NLI98_RS12005;Name=NLI98_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12005;old_locus_tag=NLI98_12000 NZ_CP100601.1 Protein Homology CDS 2485510 2486442 . - 0 ID=cds-WP_004184162.1;Parent=gene-NLI98_RS12005;Dbxref=Genbank:WP_004184162.1;Name=WP_004184162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227074.1;locus_tag=NLI98_RS12005;product=LysR family transcriptional regulator;protein_id=WP_004184162.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2486542 2486976 . + . ID=gene-NLI98_RS12010;Name=NLI98_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12010;old_locus_tag=NLI98_12005 NZ_CP100601.1 Protein Homology CDS 2486542 2486976 . + 0 ID=cds-WP_004143693.1;Parent=gene-NLI98_RS12010;Dbxref=Genbank:WP_004143693.1;Name=WP_004143693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227073.1;locus_tag=NLI98_RS12010;product=DMT family transporter;protein_id=WP_004143693.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2486986 2487462 . + . ID=gene-NLI98_RS12015;Name=NLI98_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12015;old_locus_tag=NLI98_12010 NZ_CP100601.1 Protein Homology CDS 2486986 2487462 . + 0 ID=cds-WP_088498233.1;Parent=gene-NLI98_RS12015;Dbxref=Genbank:WP_088498233.1;Name=WP_088498233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227072.1;locus_tag=NLI98_RS12015;product=DMT family transporter;protein_id=WP_088498233.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2487661 2489571 . + . ID=gene-NLI98_RS12020;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=NLI98_RS12020;old_locus_tag=NLI98_12015 NZ_CP100601.1 Protein Homology CDS 2487661 2489571 . + 0 ID=cds-WP_002905759.1;Parent=gene-NLI98_RS12020;Dbxref=Genbank:WP_002905759.1;Name=WP_002905759.1;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946773.1;locus_tag=NLI98_RS12020;product=penicillin-binding protein 2;protein_id=WP_002905759.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2489684 2490421 . + . ID=gene-NLI98_RS12025;Name=NLI98_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12025;old_locus_tag=NLI98_12020 NZ_CP100601.1 Protein Homology CDS 2489684 2490421 . + 0 ID=cds-WP_032447594.1;Parent=gene-NLI98_RS12025;Dbxref=Genbank:WP_032447594.1;Name=WP_032447594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227070.1;locus_tag=NLI98_RS12025;product=glutamine amidotransferase;protein_id=WP_032447594.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2490418 2492703 . - . ID=gene-NLI98_RS12030;Name=pqqF;gbkey=Gene;gene=pqqF;gene_biotype=protein_coding;locus_tag=NLI98_RS12030;old_locus_tag=NLI98_12025 NZ_CP100601.1 Protein Homology CDS 2490418 2492703 . - 0 ID=cds-WP_102024125.1;Parent=gene-NLI98_RS12030;Dbxref=Genbank:WP_102024125.1;Name=WP_102024125.1;Ontology_term=GO:0018189,GO:0004222;gbkey=CDS;gene=pqqF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004891744.1;locus_tag=NLI98_RS12030;product=pyrroloquinoline quinone biosynthesis protein PqqF;protein_id=WP_102024125.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2492703 2493845 . - . ID=gene-NLI98_RS12035;Name=pqqE;gbkey=Gene;gene=pqqE;gene_biotype=protein_coding;locus_tag=NLI98_RS12035;old_locus_tag=NLI98_12030 NZ_CP100601.1 Protein Homology CDS 2492703 2493845 . - 0 ID=cds-WP_004212061.1;Parent=gene-NLI98_RS12035;Dbxref=Genbank:WP_004212061.1;Name=WP_004212061.1;Ontology_term=GO:0018149,GO:0018189;gbkey=CDS;gene=pqqE;go_process=peptide cross-linking|0018149||IEA,pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227067.1;locus_tag=NLI98_RS12035;product=pyrroloquinoline quinone biosynthesis protein PqqE;protein_id=WP_004212061.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2493832 2494110 . - . ID=gene-NLI98_RS12040;Name=pqqD;gbkey=Gene;gene=pqqD;gene_biotype=protein_coding;locus_tag=NLI98_RS12040;old_locus_tag=NLI98_12035 NZ_CP100601.1 Protein Homology CDS 2493832 2494110 . - 0 ID=cds-WP_004143686.1;Parent=gene-NLI98_RS12040;Dbxref=Genbank:WP_004143686.1;Name=WP_004143686.1;Ontology_term=GO:0018189,GO:0048038;gbkey=CDS;gene=pqqD;go_function=quinone binding|0048038||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227066.1;locus_tag=NLI98_RS12040;product=pyrroloquinoline quinone biosynthesis peptide chaperone PqqD;protein_id=WP_004143686.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2494113 2494868 . - . ID=gene-NLI98_RS12045;Name=pqqC;gbkey=Gene;gene=pqqC;gene_biotype=protein_coding;locus_tag=NLI98_RS12045;old_locus_tag=NLI98_12040 NZ_CP100601.1 Protein Homology CDS 2494113 2494868 . - 0 ID=cds-WP_088498311.1;Parent=gene-NLI98_RS12045;Dbxref=Genbank:WP_088498311.1;Name=WP_088498311.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqC;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227065.1;locus_tag=NLI98_RS12045;product=pyrroloquinoline-quinone synthase PqqC;protein_id=WP_088498311.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2494862 2495788 . - . ID=gene-NLI98_RS12050;Name=pqqB;gbkey=Gene;gene=pqqB;gene_biotype=protein_coding;locus_tag=NLI98_RS12050;old_locus_tag=NLI98_12045 NZ_CP100601.1 Protein Homology CDS 2494862 2495788 . - 0 ID=cds-WP_004148467.1;Parent=gene-NLI98_RS12050;Dbxref=Genbank:WP_004148467.1;Name=WP_004148467.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqB;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227064.1;locus_tag=NLI98_RS12050;product=pyrroloquinoline quinone biosynthesis protein PqqB;protein_id=WP_004148467.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2495843 2495914 . - . ID=gene-NLI98_RS12055;Name=pqqA;gbkey=Gene;gene=pqqA;gene_biotype=protein_coding;locus_tag=NLI98_RS12055;old_locus_tag=NLI98_12050 NZ_CP100601.1 Protein Homology CDS 2495843 2495914 . - 0 ID=cds-WP_002905689.1;Parent=gene-NLI98_RS12055;Dbxref=Genbank:WP_002905689.1;Name=WP_002905689.1;Ontology_term=GO:0018189,GO:0003824;gbkey=CDS;gene=pqqA;go_function=catalytic activity|0003824||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010245082.1;locus_tag=NLI98_RS12055;product=pyrroloquinoline quinone precursor peptide PqqA;protein_id=WP_002905689.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2496051 2497070 . - . ID=gene-NLI98_RS12060;Name=NLI98_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12060;old_locus_tag=NLI98_12055 NZ_CP100601.1 Protein Homology CDS 2496051 2497070 . - 0 ID=cds-WP_088498310.1;Parent=gene-NLI98_RS12060;Dbxref=Genbank:WP_088498310.1;Name=WP_088498310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227063.1;locus_tag=NLI98_RS12060;product=dipeptidase;protein_id=WP_088498310.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2497314 2498306 . + . ID=gene-NLI98_RS12065;Name=NLI98_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12065;old_locus_tag=NLI98_12060 NZ_CP100601.1 Protein Homology CDS 2497314 2498306 . + 0 ID=cds-WP_004180015.1;Parent=gene-NLI98_RS12065;Dbxref=Genbank:WP_004180015.1;Name=WP_004180015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227062.1;locus_tag=NLI98_RS12065;product=alpha/beta hydrolase;protein_id=WP_004180015.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2498393 2499133 . + . ID=gene-NLI98_RS12070;Name=NLI98_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12070;old_locus_tag=NLI98_12065 NZ_CP100601.1 Protein Homology CDS 2498393 2499133 . + 0 ID=cds-WP_004180014.1;Parent=gene-NLI98_RS12070;Dbxref=Genbank:WP_004180014.1;Name=WP_004180014.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227061.1;locus_tag=NLI98_RS12070;product=response regulator;protein_id=WP_004180014.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2499130 2500473 . + . ID=gene-NLI98_RS12075;Name=NLI98_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12075;old_locus_tag=NLI98_12070 NZ_CP100601.1 Protein Homology CDS 2499130 2500473 . + 0 ID=cds-WP_088498309.1;Parent=gene-NLI98_RS12075;Dbxref=Genbank:WP_088498309.1;Name=WP_088498309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227060.1;locus_tag=NLI98_RS12075;product=ATP-binding protein;protein_id=WP_088498309.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2500576 2501766 . + . ID=gene-NLI98_RS12080;Name=NLI98_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12080;old_locus_tag=NLI98_12075 NZ_CP100601.1 Protein Homology CDS 2500576 2501766 . + 0 ID=cds-WP_023158305.1;Parent=gene-NLI98_RS12080;Dbxref=Genbank:WP_023158305.1;Name=WP_023158305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227059.1;locus_tag=NLI98_RS12080;product=cytochrome c biogenesis protein/redoxin;protein_id=WP_023158305.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2502348 2503241 . - . ID=gene-NLI98_RS12085;Name=NLI98_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12085;old_locus_tag=NLI98_12080 NZ_CP100601.1 Protein Homology CDS 2502348 2503241 . - 0 ID=cds-WP_088498308.1;Parent=gene-NLI98_RS12085;Dbxref=Genbank:WP_088498308.1;Name=WP_088498308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227058.1;locus_tag=NLI98_RS12085;product=LysR substrate-binding domain-containing protein;protein_id=WP_088498308.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2503437 2504918 . - . ID=gene-NLI98_RS12090;Name=NLI98_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12090;old_locus_tag=NLI98_12085 NZ_CP100601.1 Protein Homology CDS 2503437 2504918 . - 0 ID=cds-WP_004217942.1;Parent=gene-NLI98_RS12090;Dbxref=Genbank:WP_004217942.1;Name=WP_004217942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227057.1;locus_tag=NLI98_RS12090;product=aspartate aminotransferase family protein;protein_id=WP_004217942.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2504928 2506313 . - . ID=gene-NLI98_RS12095;Name=NLI98_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12095;old_locus_tag=NLI98_12090 NZ_CP100601.1 Protein Homology CDS 2504928 2506313 . - 0 ID=cds-WP_002905540.1;Parent=gene-NLI98_RS12095;Dbxref=Genbank:WP_002905540.1;Name=WP_002905540.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227056.1;locus_tag=NLI98_RS12095;product=diaminobutyrate--2-oxoglutarate transaminase;protein_id=WP_002905540.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2506620 2507555 . - . ID=gene-NLI98_RS12100;Name=NLI98_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12100;old_locus_tag=NLI98_12095 NZ_CP100601.1 Protein Homology CDS 2506620 2507555 . - 0 ID=cds-WP_264452315.1;Parent=gene-NLI98_RS12100;Dbxref=Genbank:WP_264452315.1;Name=WP_264452315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227055.1;locus_tag=NLI98_RS12100;product=ABC transporter substrate-binding protein;protein_id=WP_264452315.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2507580 2508320 . - . ID=gene-NLI98_RS12105;Name=NLI98_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12105;old_locus_tag=NLI98_12100 NZ_CP100601.1 Protein Homology CDS 2507580 2508320 . - 0 ID=cds-WP_004143673.1;Parent=gene-NLI98_RS12105;Dbxref=Genbank:WP_004143673.1;Name=WP_004143673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227054.1;locus_tag=NLI98_RS12105;product=ABC transporter permease;protein_id=WP_004143673.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2508317 2509045 . - . ID=gene-NLI98_RS12110;Name=NLI98_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12110;old_locus_tag=NLI98_12105 NZ_CP100601.1 Protein Homology CDS 2508317 2509045 . - 0 ID=cds-WP_004180001.1;Parent=gene-NLI98_RS12110;Dbxref=Genbank:WP_004180001.1;Name=WP_004180001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227053.1;locus_tag=NLI98_RS12110;product=ABC transporter ATP-binding protein;protein_id=WP_004180001.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2509042 2509737 . - . ID=gene-NLI98_RS12115;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=NLI98_RS12115;old_locus_tag=NLI98_12110 NZ_CP100601.1 Protein Homology CDS 2509042 2509737 . - 0 ID=cds-WP_159195373.1;Parent=gene-NLI98_RS12115;Dbxref=Genbank:WP_159195373.1;Name=WP_159195373.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227052.1;locus_tag=NLI98_RS12115;product=thiaminase II;protein_id=WP_159195373.1;transl_table=11 NZ_CP100601.1 cmsearch riboswitch 2509806 2509907 . - . ID=id-NZ_CP100601.1:2509806..2509907;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100601.1 RefSeq pseudogene 2509908 2509994 . + . ID=gene-NLI98_RS12120;Name=NLI98_RS12120;end_range=2509994,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS12120;old_locus_tag=NLI98_12115;partial=true;pseudo=true NZ_CP100601.1 Protein Homology CDS 2509908 2509994 . + 0 ID=cds-NLI98_RS12120;Parent=gene-NLI98_RS12120;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2509994,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227051.1;locus_tag=NLI98_RS12120;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2510154 2511260 . + . ID=gene-NLI98_RS12125;Name=NLI98_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12125;old_locus_tag=NLI98_12120 NZ_CP100601.1 Protein Homology CDS 2510154 2511260 . + 0 ID=cds-WP_088498305.1;Parent=gene-NLI98_RS12125;Dbxref=Genbank:WP_088498305.1;Name=WP_088498305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227050.1;locus_tag=NLI98_RS12125;product=DUF4056 domain-containing protein;protein_id=WP_088498305.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2511298 2512470 . - . ID=gene-NLI98_RS12130;Name=NLI98_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12130;old_locus_tag=NLI98_12125 NZ_CP100601.1 Protein Homology CDS 2511298 2512470 . - 0 ID=cds-WP_088498304.1;Parent=gene-NLI98_RS12130;Dbxref=Genbank:WP_088498304.1;Name=WP_088498304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227049.1;locus_tag=NLI98_RS12130;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_088498304.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2512484 2513407 . - . ID=gene-NLI98_RS12135;Name=NLI98_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12135;old_locus_tag=NLI98_12130 NZ_CP100601.1 Protein Homology CDS 2512484 2513407 . - 0 ID=cds-WP_088498303.1;Parent=gene-NLI98_RS12135;Dbxref=Genbank:WP_088498303.1;Name=WP_088498303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227048.1;locus_tag=NLI98_RS12135;product=sugar phosphate isomerase/epimerase;protein_id=WP_088498303.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2513600 2514640 . - . ID=gene-NLI98_RS12140;Name=NLI98_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12140;old_locus_tag=NLI98_12135 NZ_CP100601.1 Protein Homology CDS 2513600 2514640 . - 0 ID=cds-WP_049026267.1;Parent=gene-NLI98_RS12140;Dbxref=Genbank:WP_049026267.1;Name=WP_049026267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227047.1;locus_tag=NLI98_RS12140;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_049026267.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2515039 2516295 . + . ID=gene-NLI98_RS12145;Name=NLI98_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12145;old_locus_tag=NLI98_12140 NZ_CP100601.1 Protein Homology CDS 2515039 2516295 . + 0 ID=cds-WP_032415989.1;Parent=gene-NLI98_RS12145;Dbxref=Genbank:WP_032415989.1;Name=WP_032415989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227046.1;locus_tag=NLI98_RS12145;product=sensor domain-containing diguanylate cyclase;protein_id=WP_032415989.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2516394 2517704 . - . ID=gene-NLI98_RS12150;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=protein_coding;locus_tag=NLI98_RS12150;old_locus_tag=NLI98_12145 NZ_CP100601.1 Protein Homology CDS 2516394 2517704 . - 0 ID=cds-WP_048987550.1;Parent=gene-NLI98_RS12150;Dbxref=Genbank:WP_048987550.1;Name=WP_048987550.1;Ontology_term=GO:0006147,GO:0008892;gbkey=CDS;gene=guaD;go_function=guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227045.1;locus_tag=NLI98_RS12150;product=guanine deaminase;protein_id=WP_048987550.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2517806 2519302 . - . ID=gene-NLI98_RS12155;Name=NLI98_RS12155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS12155;old_locus_tag=NLI98_12150;pseudo=true NZ_CP100601.1 Protein Homology CDS 2517806 2519302 . - 0 ID=cds-NLI98_RS12155;Parent=gene-NLI98_RS12155;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227044.1;locus_tag=NLI98_RS12155;product=NCS1 family nucleobase:cation symporter-1;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2519447 2520163 . + . ID=gene-NLI98_RS12160;Name=NLI98_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12160;old_locus_tag=NLI98_12155 NZ_CP100601.1 Protein Homology CDS 2519447 2520163 . + 0 ID=cds-WP_088498302.1;Parent=gene-NLI98_RS12160;Dbxref=Genbank:WP_088498302.1;Name=WP_088498302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227043.1;locus_tag=NLI98_RS12160;product=GntR family transcriptional regulator;protein_id=WP_088498302.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2520163 2521034 . + . ID=gene-NLI98_RS12165;Name=hpxA;gbkey=Gene;gene=hpxA;gene_biotype=pseudogene;locus_tag=NLI98_RS12165;old_locus_tag=NLI98_12160;pseudo=true NZ_CP100601.1 Protein Homology CDS 2520163 2521034 . + 0 ID=cds-NLI98_RS12165;Parent=gene-NLI98_RS12165;Note=frameshifted;gbkey=CDS;gene=hpxA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227042.1;locus_tag=NLI98_RS12165;product=allantoin racemase;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2520919 2521851 . + . ID=gene-NLI98_RS12170;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=NLI98_RS12170;old_locus_tag=NLI98_12165 NZ_CP100601.1 Protein Homology CDS 2520919 2521851 . + 0 ID=cds-WP_004179983.1;Parent=gene-NLI98_RS12170;Dbxref=Genbank:WP_004179983.1;Name=WP_004179983.1;Ontology_term=GO:0000256,GO:0016810;gbkey=CDS;gene=puuE;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202535.1;locus_tag=NLI98_RS12170;product=allantoinase PuuE;protein_id=WP_004179983.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2521940 2522731 . - . ID=gene-NLI98_RS12175;Name=NLI98_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12175;old_locus_tag=NLI98_12170 NZ_CP100601.1 Protein Homology CDS 2521940 2522731 . - 0 ID=cds-WP_004184144.1;Parent=gene-NLI98_RS12175;Dbxref=Genbank:WP_004184144.1;Name=WP_004184144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227040.1;locus_tag=NLI98_RS12175;product=sulfite exporter TauE/SafE family protein;protein_id=WP_004184144.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2522841 2523608 . + . ID=gene-NLI98_RS12180;Name=NLI98_RS12180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS12180;old_locus_tag=NLI98_12175;pseudo=true NZ_CP100601.1 Protein Homology CDS 2522841 2523608 . + 0 ID=cds-NLI98_RS12180;Parent=gene-NLI98_RS12180;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227039.1;locus_tag=NLI98_RS12180;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2523811 2524035 . + . ID=gene-NLI98_RS12185;Name=NLI98_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12185;old_locus_tag=NLI98_12180 NZ_CP100601.1 Protein Homology CDS 2523811 2524035 . + 0 ID=cds-WP_004176101.1;Parent=gene-NLI98_RS12185;Dbxref=Genbank:WP_004176101.1;Name=WP_004176101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227038.1;locus_tag=NLI98_RS12185;product=hypothetical protein;protein_id=WP_004176101.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2524040 2524183 . + . ID=gene-NLI98_RS12190;Name=NLI98_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12190;old_locus_tag=NLI98_12185 NZ_CP100601.1 GeneMarkS-2+ CDS 2524040 2524183 . + 0 ID=cds-WP_004184140.1;Parent=gene-NLI98_RS12190;Dbxref=Genbank:WP_004184140.1;Name=WP_004184140.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS12190;product=hypothetical protein;protein_id=WP_004184140.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2524255 2524875 . + . ID=gene-NLI98_RS12195;Name=NLI98_RS12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12195;old_locus_tag=NLI98_12190 NZ_CP100601.1 Protein Homology CDS 2524255 2524875 . + 0 ID=cds-WP_004189986.1;Parent=gene-NLI98_RS12195;Dbxref=Genbank:WP_004189986.1;Name=WP_004189986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189986.1;locus_tag=NLI98_RS12195;product=histidine phosphatase family protein;protein_id=WP_004189986.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2524986 2525075 . + . ID=gene-NLI98_RS12200;Name=NLI98_RS12200;end_range=2525075,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS12200;old_locus_tag=NLI98_12195;partial=true;pseudo=true NZ_CP100601.1 Protein Homology CDS 2524986 2525075 . + 0 ID=cds-NLI98_RS12200;Parent=gene-NLI98_RS12200;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2525075,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015705166.1;locus_tag=NLI98_RS12200;partial=true;product=LysE family translocator;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2525136 2525645 . - . ID=gene-NLI98_RS12205;Name=NLI98_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12205;old_locus_tag=NLI98_12200 NZ_CP100601.1 Protein Homology CDS 2525136 2525645 . - 0 ID=cds-WP_088498301.1;Parent=gene-NLI98_RS12205;Dbxref=Genbank:WP_088498301.1;Name=WP_088498301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227035.1;locus_tag=NLI98_RS12205;product=cysteine hydrolase;protein_id=WP_088498301.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2525970 2526713 . + . ID=gene-NLI98_RS12210;Name=NLI98_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12210;old_locus_tag=NLI98_12205 NZ_CP100601.1 Protein Homology CDS 2525970 2526713 . + 0 ID=cds-WP_088498300.1;Parent=gene-NLI98_RS12210;Dbxref=Genbank:WP_088498300.1;Name=WP_088498300.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012334.2;locus_tag=NLI98_RS12210;product=SDR family oxidoreductase;protein_id=WP_088498300.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2526848 2527573 . - . ID=gene-NLI98_RS12215;Name=NLI98_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12215;old_locus_tag=NLI98_12215 NZ_CP100601.1 Protein Homology CDS 2526848 2527573 . - 0 ID=cds-WP_088498299.1;Parent=gene-NLI98_RS12215;Dbxref=Genbank:WP_088498299.1;Name=WP_088498299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227033.1;locus_tag=NLI98_RS12215;product=type 1 glutamine amidotransferase;protein_id=WP_088498299.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2527666 2528466 . + . ID=gene-NLI98_RS12220;Name=NLI98_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12220;old_locus_tag=NLI98_12220 NZ_CP100601.1 Protein Homology CDS 2527666 2528466 . + 0 ID=cds-WP_016947343.1;Parent=gene-NLI98_RS12220;Dbxref=Genbank:WP_016947343.1;Name=WP_016947343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189994.1;locus_tag=NLI98_RS12220;product=helix-turn-helix transcriptional regulator;protein_id=WP_016947343.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2528931 2529830 . - . ID=gene-NLI98_RS12225;Name=NLI98_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12225;old_locus_tag=NLI98_12225 NZ_CP100601.1 Protein Homology CDS 2528931 2529830 . - 0 ID=cds-WP_088498298.1;Parent=gene-NLI98_RS12225;Dbxref=Genbank:WP_088498298.1;Name=WP_088498298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004219695.1;locus_tag=NLI98_RS12225;product=hypothetical protein;protein_id=WP_088498298.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2530033 2530389 . - . ID=gene-NLI98_RS12230;Name=NLI98_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12230;old_locus_tag=NLI98_12230 NZ_CP100601.1 Protein Homology CDS 2530033 2530389 . - 0 ID=cds-WP_072143287.1;Parent=gene-NLI98_RS12230;Dbxref=Genbank:WP_072143287.1;Name=WP_072143287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227031.1;locus_tag=NLI98_RS12230;product=ASCH domain-containing protein;protein_id=WP_072143287.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2530543 2530734 . + . ID=gene-NLI98_RS12235;Name=NLI98_RS12235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS12235;old_locus_tag=NLI98_12235;partial=true;pseudo=true;start_range=.,2530543 NZ_CP100601.1 Protein Homology CDS 2530543 2530734 . + 0 ID=cds-NLI98_RS12235;Parent=gene-NLI98_RS12235;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002905492.1;locus_tag=NLI98_RS12235;partial=true;product=hypothetical protein;pseudo=true;start_range=.,2530543;transl_table=11 NZ_CP100601.1 RefSeq gene 2530738 2532012 . - . ID=gene-NLI98_RS12240;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=NLI98_RS12240;old_locus_tag=NLI98_12240 NZ_CP100601.1 Protein Homology CDS 2530738 2532012 . - 0 ID=cds-WP_088498297.1;Parent=gene-NLI98_RS12240;Dbxref=Genbank:WP_088498297.1;Name=WP_088498297.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227028.1;locus_tag=NLI98_RS12240;product=beta-ketoacyl-ACP synthase II;protein_id=WP_088498297.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2532032 2533594 . - . ID=gene-NLI98_RS12245;Name=NLI98_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12245;old_locus_tag=NLI98_12245 NZ_CP100601.1 Protein Homology CDS 2532032 2533594 . - 0 ID=cds-WP_015958439.1;Parent=gene-NLI98_RS12245;Dbxref=Genbank:WP_015958439.1;Name=WP_015958439.1;Ontology_term=GO:0006855,GO:0009410,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227027.1;locus_tag=NLI98_RS12245;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_015958439.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2533591 2534634 . - . ID=gene-NLI98_RS12250;Name=NLI98_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12250;old_locus_tag=NLI98_12250 NZ_CP100601.1 Protein Homology CDS 2533591 2534634 . - 0 ID=cds-WP_004179962.1;Parent=gene-NLI98_RS12250;Dbxref=Genbank:WP_004179962.1;Name=WP_004179962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205823.1;locus_tag=NLI98_RS12250;product=HlyD family secretion protein;protein_id=WP_004179962.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2534618 2535175 . - . ID=gene-NLI98_RS12255;Name=NLI98_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12255;old_locus_tag=NLI98_12255 NZ_CP100601.1 Protein Homology CDS 2534618 2535175 . - 0 ID=cds-WP_004176109.1;Parent=gene-NLI98_RS12255;Dbxref=Genbank:WP_004176109.1;Name=WP_004176109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227025.1;locus_tag=NLI98_RS12255;product=helix-turn-helix transcriptional regulator;protein_id=WP_004176109.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2535172 2535294 . - . ID=gene-NLI98_RS12260;Name=NLI98_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12260;old_locus_tag=NLI98_12260 NZ_CP100601.1 Protein Homology CDS 2535172 2535294 . - 0 ID=cds-WP_014343077.1;Parent=gene-NLI98_RS12260;Dbxref=Genbank:WP_014343077.1;Name=WP_014343077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227024.1;locus_tag=NLI98_RS12260;product=hypothetical protein;protein_id=WP_014343077.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2535496 2536614 . + . ID=gene-NLI98_RS12265;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=NLI98_RS12265;old_locus_tag=NLI98_12265 NZ_CP100601.1 Protein Homology CDS 2535496 2536614 . + 0 ID=cds-WP_088498295.1;Parent=gene-NLI98_RS12265;Dbxref=Genbank:WP_088498295.1;Name=WP_088498295.1;Ontology_term=GO:0009089,GO:0004073;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227023.1;locus_tag=NLI98_RS12265;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_088498295.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2536652 2537074 . - . ID=gene-NLI98_RS12270;Name=NLI98_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12270;old_locus_tag=NLI98_12270 NZ_CP100601.1 Protein Homology CDS 2536652 2537074 . - 0 ID=cds-WP_004179959.1;Parent=gene-NLI98_RS12270;Dbxref=Genbank:WP_004179959.1;Name=WP_004179959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227022.1;locus_tag=NLI98_RS12270;product=GNAT family N-acetyltransferase;protein_id=WP_004179959.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2537160 2537546 . - . ID=gene-NLI98_RS12275;Name=hpxZ;gbkey=Gene;gene=hpxZ;gene_biotype=protein_coding;locus_tag=NLI98_RS12275;old_locus_tag=NLI98_12275 NZ_CP100601.1 Protein Homology CDS 2537160 2537546 . - 0 ID=cds-WP_002905421.1;Parent=gene-NLI98_RS12275;Dbxref=Genbank:WP_002905421.1;Name=WP_002905421.1;gbkey=CDS;gene=hpxZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227021.1;locus_tag=NLI98_RS12275;product=oxalurate catabolism protein HpxZ;protein_id=WP_002905421.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2537543 2538940 . - . ID=gene-NLI98_RS12280;Name=NLI98_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12280;old_locus_tag=NLI98_12280 NZ_CP100601.1 Protein Homology CDS 2537543 2538940 . - 0 ID=cds-WP_004184124.1;Parent=gene-NLI98_RS12280;Dbxref=Genbank:WP_004184124.1;Name=WP_004184124.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020805177.1;locus_tag=NLI98_RS12280;product=AtzE family amidohydrolase;protein_id=WP_004184124.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2538937 2539122 . - . ID=gene-NLI98_RS12285;Name=hpxX;gbkey=Gene;gene=hpxX;gene_biotype=protein_coding;locus_tag=NLI98_RS12285;old_locus_tag=NLI98_12285 NZ_CP100601.1 Protein Homology CDS 2538937 2539122 . - 0 ID=cds-WP_004179955.1;Parent=gene-NLI98_RS12285;Dbxref=Genbank:WP_004179955.1;Name=WP_004179955.1;gbkey=CDS;gene=hpxX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227018.1;locus_tag=NLI98_RS12285;product=oxalurate catabolism protein HpxX;protein_id=WP_004179955.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2539133 2540719 . - . ID=gene-NLI98_RS12290;Name=hpxW;gbkey=Gene;gene=hpxW;gene_biotype=protein_coding;locus_tag=NLI98_RS12290;old_locus_tag=NLI98_12290 NZ_CP100601.1 Protein Homology CDS 2539133 2540719 . - 0 ID=cds-WP_004891835.1;Parent=gene-NLI98_RS12290;Dbxref=Genbank:WP_004891835.1;Name=WP_004891835.1;gbkey=CDS;gene=hpxW;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227017.1;locus_tag=NLI98_RS12290;product=oxamate amidohydrolase;protein_id=WP_004891835.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2540899 2541738 . + . ID=gene-NLI98_RS12295;Name=hpxU;gbkey=Gene;gene=hpxU;gene_biotype=protein_coding;locus_tag=NLI98_RS12295;old_locus_tag=NLI98_12295 NZ_CP100601.1 Protein Homology CDS 2540899 2541738 . + 0 ID=cds-WP_032412266.1;Parent=gene-NLI98_RS12295;Dbxref=Genbank:WP_032412266.1;Name=WP_032412266.1;gbkey=CDS;gene=hpxU;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227016.1;locus_tag=NLI98_RS12295;product=MurR/RpiR family transcriptional regulator HpxU;protein_id=WP_032412266.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2541953 2542738 . + . ID=gene-NLI98_RS12300;Name=NLI98_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12300;old_locus_tag=NLI98_12300 NZ_CP100601.1 Protein Homology CDS 2541953 2542738 . + 0 ID=cds-WP_004143665.1;Parent=gene-NLI98_RS12300;Dbxref=Genbank:WP_004143665.1;Name=WP_004143665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227015.1;locus_tag=NLI98_RS12300;product=transporter substrate-binding domain-containing protein;protein_id=WP_004143665.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2542748 2543413 . + . ID=gene-NLI98_RS12305;Name=NLI98_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12305;old_locus_tag=NLI98_12305 NZ_CP100601.1 Protein Homology CDS 2542748 2543413 . + 0 ID=cds-WP_082228787.1;Parent=gene-NLI98_RS12305;Dbxref=Genbank:WP_082228787.1;Name=WP_082228787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227014.1;locus_tag=NLI98_RS12305;product=amino acid ABC transporter permease;protein_id=WP_082228787.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2543413 2544069 . + . ID=gene-NLI98_RS12310;Name=NLI98_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12310;old_locus_tag=NLI98_12310 NZ_CP100601.1 Protein Homology CDS 2543413 2544069 . + 0 ID=cds-WP_004176118.1;Parent=gene-NLI98_RS12310;Dbxref=Genbank:WP_004176118.1;Name=WP_004176118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227013.1;locus_tag=NLI98_RS12310;product=amino acid ABC transporter permease;protein_id=WP_004176118.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2544050 2544787 . + . ID=gene-NLI98_RS12315;Name=NLI98_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12315;old_locus_tag=NLI98_12315 NZ_CP100601.1 Protein Homology CDS 2544050 2544787 . + 0 ID=cds-WP_004143660.1;Parent=gene-NLI98_RS12315;Dbxref=Genbank:WP_004143660.1;Name=WP_004143660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227012.1;locus_tag=NLI98_RS12315;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_004143660.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2544803 2546044 . + . ID=gene-NLI98_RS12320;Name=NLI98_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12320;old_locus_tag=NLI98_12320 NZ_CP100601.1 Protein Homology CDS 2544803 2546044 . + 0 ID=cds-WP_019705120.1;Parent=gene-NLI98_RS12320;Dbxref=Genbank:WP_019705120.1;Name=WP_019705120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227011.1;locus_tag=NLI98_RS12320;product=alanine--glyoxylate aminotransferase family protein;protein_id=WP_019705120.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2546041 2547300 . + . ID=gene-NLI98_RS12325;Name=hpxK;gbkey=Gene;gene=hpxK;gene_biotype=protein_coding;locus_tag=NLI98_RS12325;old_locus_tag=NLI98_12325 NZ_CP100601.1 Protein Homology CDS 2546041 2547300 . + 0 ID=cds-WP_088498294.1;Parent=gene-NLI98_RS12325;Dbxref=Genbank:WP_088498294.1;Name=WP_088498294.1;Ontology_term=GO:0016813;gbkey=CDS;gene=hpxK;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amidines|0016813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227010.1;locus_tag=NLI98_RS12325;product=allantoate amidohydrolase;protein_id=WP_088498294.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2547333 2548310 . - . ID=gene-NLI98_RS12330;Name=NLI98_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12330;old_locus_tag=NLI98_12330 NZ_CP100601.1 Protein Homology CDS 2547333 2548310 . - 0 ID=cds-WP_004179941.1;Parent=gene-NLI98_RS12330;Dbxref=Genbank:WP_004179941.1;Name=WP_004179941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227009.1;locus_tag=NLI98_RS12330;product=nitronate monooxygenase;protein_id=WP_004179941.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2548485 2549375 . + . ID=gene-NLI98_RS12335;Name=NLI98_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12335;old_locus_tag=NLI98_12335 NZ_CP100601.1 Protein Homology CDS 2548485 2549375 . + 0 ID=cds-WP_004218747.1;Parent=gene-NLI98_RS12335;Dbxref=Genbank:WP_004218747.1;Name=WP_004218747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227008.1;locus_tag=NLI98_RS12335;product=LysR family transcriptional regulator;protein_id=WP_004218747.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2549440 2549973 . + . ID=gene-NLI98_RS12340;Name=NLI98_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12340;old_locus_tag=NLI98_12340 NZ_CP100601.1 Protein Homology CDS 2549440 2549973 . + 0 ID=cds-WP_004179939.1;Parent=gene-NLI98_RS12340;Dbxref=Genbank:WP_004179939.1;Name=WP_004179939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227007.1;locus_tag=NLI98_RS12340;product=hypothetical protein;protein_id=WP_004179939.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2550205 2551305 . - . ID=gene-NLI98_RS12345;Name=NLI98_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12345;old_locus_tag=NLI98_12345 NZ_CP100601.1 Protein Homology CDS 2550205 2551305 . - 0 ID=cds-WP_019705118.1;Parent=gene-NLI98_RS12345;Dbxref=Genbank:WP_019705118.1;Name=WP_019705118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705118.1;locus_tag=NLI98_RS12345;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=WP_019705118.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2551413 2553020 . - . ID=gene-NLI98_RS12350;Name=NLI98_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12350;old_locus_tag=NLI98_12350 NZ_CP100601.1 Protein Homology CDS 2551413 2553020 . - 0 ID=cds-WP_023316875.1;Parent=gene-NLI98_RS12350;Dbxref=Genbank:WP_023316875.1;Name=WP_023316875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227004.1;locus_tag=NLI98_RS12350;product=FAD-NAD(P)-binding protein;protein_id=WP_023316875.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2553296 2554528 . + . ID=gene-NLI98_RS12355;Name=NLI98_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12355;old_locus_tag=NLI98_12355 NZ_CP100601.1 Protein Homology CDS 2553296 2554528 . + 0 ID=cds-WP_021440155.1;Parent=gene-NLI98_RS12355;Dbxref=Genbank:WP_021440155.1;Name=WP_021440155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227003.1;locus_tag=NLI98_RS12355;product=MFS transporter;protein_id=WP_021440155.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2554569 2555483 . - . ID=gene-NLI98_RS12360;Name=NLI98_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12360;old_locus_tag=NLI98_12360 NZ_CP100601.1 Protein Homology CDS 2554569 2555483 . - 0 ID=cds-WP_019705116.1;Parent=gene-NLI98_RS12360;Dbxref=Genbank:WP_019705116.1;Name=WP_019705116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705116.1;locus_tag=NLI98_RS12360;product=DMT family transporter;protein_id=WP_019705116.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2555685 2556785 . + . ID=gene-NLI98_RS12365;Name=NLI98_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12365;old_locus_tag=NLI98_12365 NZ_CP100601.1 Protein Homology CDS 2555685 2556785 . + 0 ID=cds-WP_004148409.1;Parent=gene-NLI98_RS12365;Dbxref=Genbank:WP_004148409.1;Name=WP_004148409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227001.1;locus_tag=NLI98_RS12365;product=iron-containing redox enzyme family protein;protein_id=WP_004148409.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2556761 2557339 . - . ID=gene-NLI98_RS12370;Name=NLI98_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12370;old_locus_tag=NLI98_12370 NZ_CP100601.1 Protein Homology CDS 2556761 2557339 . - 0 ID=cds-WP_088498293.1;Parent=gene-NLI98_RS12370;Dbxref=Genbank:WP_088498293.1;Name=WP_088498293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227000.1;locus_tag=NLI98_RS12370;product=TetR/AcrR family transcriptional regulator;protein_id=WP_088498293.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2557599 2558135 . + . ID=gene-NLI98_RS12375;Name=NLI98_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12375;old_locus_tag=NLI98_12375 NZ_CP100601.1 Protein Homology CDS 2557599 2558135 . + 0 ID=cds-WP_004176132.1;Parent=gene-NLI98_RS12375;Dbxref=Genbank:WP_004176132.1;Name=WP_004176132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015958432.1;locus_tag=NLI98_RS12375;product=GNAT family N-acetyltransferase;protein_id=WP_004176132.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2558173 2559471 . - . ID=gene-NLI98_RS12380;Name=oxlT;gbkey=Gene;gene=oxlT;gene_biotype=protein_coding;locus_tag=NLI98_RS12380;old_locus_tag=NLI98_12380 NZ_CP100601.1 Protein Homology CDS 2558173 2559471 . - 0 ID=cds-WP_049109089.1;Parent=gene-NLI98_RS12380;Dbxref=Genbank:WP_049109089.1;Name=WP_049109089.1;Ontology_term=GO:0015297;gbkey=CDS;gene=oxlT;go_function=antiporter activity|0015297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226997.1;locus_tag=NLI98_RS12380;product=oxalate/formate MFS antiporter;protein_id=WP_049109089.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2559688 2559906 . + . ID=gene-NLI98_RS12385;Name=NLI98_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12385;old_locus_tag=NLI98_12385 NZ_CP100601.1 Protein Homology CDS 2559688 2559906 . + 0 ID=cds-WP_020325054.1;Parent=gene-NLI98_RS12385;Dbxref=Genbank:WP_020325054.1;Name=WP_020325054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226996.1;locus_tag=NLI98_RS12385;product=hypothetical protein;protein_id=WP_020325054.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2560004 2561056 . - . ID=gene-NLI98_RS12390;Name=NLI98_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12390;old_locus_tag=NLI98_12390 NZ_CP100601.1 Protein Homology CDS 2560004 2561056 . - 0 ID=cds-WP_017880184.1;Parent=gene-NLI98_RS12390;Dbxref=Genbank:WP_017880184.1;Name=WP_017880184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226995.1;locus_tag=NLI98_RS12390;product=LacI family transcriptional regulator;protein_id=WP_017880184.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2561274 2561711 . + . ID=gene-NLI98_RS12395;Name=NLI98_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12395;old_locus_tag=NLI98_12395 NZ_CP100601.1 Protein Homology CDS 2561274 2561711 . + 0 ID=cds-WP_004143637.1;Parent=gene-NLI98_RS12395;Dbxref=Genbank:WP_004143637.1;Name=WP_004143637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226994.1;locus_tag=NLI98_RS12395;product=PTS sugar transporter subunit IIA;protein_id=WP_004143637.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2561723 2561989 . + . ID=gene-NLI98_RS12400;Name=NLI98_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12400;old_locus_tag=NLI98_12400 NZ_CP100601.1 Protein Homology CDS 2561723 2561989 . + 0 ID=cds-WP_088498292.1;Parent=gene-NLI98_RS12400;Dbxref=Genbank:WP_088498292.1;Name=WP_088498292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226993.1;locus_tag=NLI98_RS12400;product=PTS sugar transporter subunit IIB;protein_id=WP_088498292.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2562020 2563282 . + . ID=gene-NLI98_RS12405;Name=NLI98_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12405;old_locus_tag=NLI98_12405 NZ_CP100601.1 Protein Homology CDS 2562020 2563282 . + 0 ID=cds-WP_004176135.1;Parent=gene-NLI98_RS12405;Dbxref=Genbank:WP_004176135.1;Name=WP_004176135.1;Ontology_term=GO:0009401;gbkey=CDS;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226992.1;locus_tag=NLI98_RS12405;product=PTS ascorbate transporter subunit IIC;protein_id=WP_004176135.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2563303 2563983 . + . ID=gene-NLI98_RS12410;Name=alsE;gbkey=Gene;gene=alsE;gene_biotype=protein_coding;locus_tag=NLI98_RS12410;old_locus_tag=NLI98_12410 NZ_CP100601.1 Protein Homology CDS 2563303 2563983 . + 0 ID=cds-WP_102024123.1;Parent=gene-NLI98_RS12410;Dbxref=Genbank:WP_102024123.1;Name=WP_102024123.1;gbkey=CDS;gene=alsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226991.1;locus_tag=NLI98_RS12410;product=D-allulose 6-phosphate 3-epimerase;protein_id=WP_102024123.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2564100 2564570 . + . ID=gene-NLI98_RS12415;Name=NLI98_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12415;old_locus_tag=NLI98_12415 NZ_CP100601.1 Protein Homology CDS 2564100 2564570 . + 0 ID=cds-WP_002905131.1;Parent=gene-NLI98_RS12415;Dbxref=Genbank:WP_002905131.1;Name=WP_002905131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226990.1;locus_tag=NLI98_RS12415;product=PTS sugar transporter subunit IIA;protein_id=WP_002905131.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2564627 2564938 . + . ID=gene-NLI98_RS12420;Name=NLI98_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12420;old_locus_tag=NLI98_12420 NZ_CP100601.1 Protein Homology CDS 2564627 2564938 . + 0 ID=cds-WP_020316888.1;Parent=gene-NLI98_RS12420;Dbxref=Genbank:WP_020316888.1;Name=WP_020316888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184097.1;locus_tag=NLI98_RS12420;product=PTS fructose transporter subunit IIB;protein_id=WP_020316888.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2564981 2566087 . + . ID=gene-NLI98_RS12425;Name=NLI98_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12425;old_locus_tag=NLI98_12425 NZ_CP100601.1 Protein Homology CDS 2564981 2566087 . + 0 ID=cds-WP_004176140.1;Parent=gene-NLI98_RS12425;Dbxref=Genbank:WP_004176140.1;Name=WP_004176140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226988.1;locus_tag=NLI98_RS12425;product=PTS fructose transporter subunit IIC;protein_id=WP_004176140.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2566293 2566913 . + . ID=gene-NLI98_RS12430;Name=NLI98_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12430;old_locus_tag=NLI98_12430 NZ_CP100601.1 Protein Homology CDS 2566293 2566913 . + 0 ID=cds-WP_102024122.1;Parent=gene-NLI98_RS12430;Dbxref=Genbank:WP_102024122.1;Name=WP_102024122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002905003.1;locus_tag=NLI98_RS12430;product=LysE family translocator;protein_id=WP_102024122.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2566971 2568179 . - . ID=gene-NLI98_RS12435;Name=NLI98_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12435;old_locus_tag=NLI98_12435 NZ_CP100601.1 Protein Homology CDS 2566971 2568179 . - 0 ID=cds-WP_094645250.1;Parent=gene-NLI98_RS12435;Dbxref=Genbank:WP_094645250.1;Name=WP_094645250.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226986.1;locus_tag=NLI98_RS12435;product=MFS transporter;protein_id=WP_094645250.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2568283 2569185 . + . ID=gene-NLI98_RS12440;Name=NLI98_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12440;old_locus_tag=NLI98_12440 NZ_CP100601.1 Protein Homology CDS 2568283 2569185 . + 0 ID=cds-WP_094645249.1;Parent=gene-NLI98_RS12440;Dbxref=Genbank:WP_094645249.1;Name=WP_094645249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226985.1;locus_tag=NLI98_RS12440;product=LysR family transcriptional regulator;protein_id=WP_094645249.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2569227 2570114 . - . ID=gene-NLI98_RS12445;Name=NLI98_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12445;old_locus_tag=NLI98_12445 NZ_CP100601.1 Protein Homology CDS 2569227 2570114 . - 0 ID=cds-WP_094645248.1;Parent=gene-NLI98_RS12445;Dbxref=Genbank:WP_094645248.1;Name=WP_094645248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226984.1;locus_tag=NLI98_RS12445;product=LysR family transcriptional regulator;protein_id=WP_094645248.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2570275 2571069 . + . ID=gene-NLI98_RS12450;Name=NLI98_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12450;old_locus_tag=NLI98_12450 NZ_CP100601.1 Protein Homology CDS 2570275 2571069 . + 0 ID=cds-WP_172676880.1;Parent=gene-NLI98_RS12450;Dbxref=Genbank:WP_172676880.1;Name=WP_172676880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226983.1;locus_tag=NLI98_RS12450;product=N-acyl homoserine lactonase family protein;protein_id=WP_172676880.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2571174 2571602 . - . ID=gene-NLI98_RS12455;Name=NLI98_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12455;old_locus_tag=NLI98_12455 NZ_CP100601.1 Protein Homology CDS 2571174 2571602 . - 0 ID=cds-WP_004179900.1;Parent=gene-NLI98_RS12455;Dbxref=Genbank:WP_004179900.1;Name=WP_004179900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226982.1;locus_tag=NLI98_RS12455;product=cell envelope integrity protein TolA;protein_id=WP_004179900.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2571715 2572857 . - . ID=gene-NLI98_RS12460;Name=NLI98_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12460;old_locus_tag=NLI98_12460 NZ_CP100601.1 Protein Homology CDS 2571715 2572857 . - 0 ID=cds-WP_004199916.1;Parent=gene-NLI98_RS12460;Dbxref=Genbank:WP_004199916.1;Name=WP_004199916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226981.1;locus_tag=NLI98_RS12460;product=M20 family metallopeptidase;protein_id=WP_004199916.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2572857 2573612 . - . ID=gene-NLI98_RS12465;Name=NLI98_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12465;old_locus_tag=NLI98_12465 NZ_CP100601.1 Protein Homology CDS 2572857 2573612 . - 0 ID=cds-WP_094645246.1;Parent=gene-NLI98_RS12465;Dbxref=Genbank:WP_094645246.1;Name=WP_094645246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226980.1;locus_tag=NLI98_RS12465;product=glutamine amidotransferase;protein_id=WP_094645246.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2573627 2574706 . - . ID=gene-NLI98_RS12470;Name=NLI98_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12470;old_locus_tag=NLI98_12470 NZ_CP100601.1 Protein Homology CDS 2573627 2574706 . - 0 ID=cds-WP_148621449.1;Parent=gene-NLI98_RS12470;Dbxref=Genbank:WP_148621449.1;Name=WP_148621449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226979.1;locus_tag=NLI98_RS12470;product=phosphotriesterase-related protein;protein_id=WP_148621449.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2574710 2575711 . - . ID=gene-NLI98_RS12475;Name=NLI98_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12475;old_locus_tag=NLI98_12475 NZ_CP100601.1 Protein Homology CDS 2574710 2575711 . - 0 ID=cds-WP_187388841.1;Parent=gene-NLI98_RS12475;Dbxref=Genbank:WP_187388841.1;Name=WP_187388841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226978.1;locus_tag=NLI98_RS12475;product=ABC transporter permease;protein_id=WP_187388841.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2575730 2576476 . - . ID=gene-NLI98_RS12480;Name=NLI98_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12480;old_locus_tag=NLI98_12480 NZ_CP100601.1 Protein Homology CDS 2575730 2576476 . - 0 ID=cds-WP_172676903.1;Parent=gene-NLI98_RS12480;Dbxref=Genbank:WP_172676903.1;Name=WP_172676903.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226977.1;locus_tag=NLI98_RS12480;product=ATP-binding cassette domain-containing protein;protein_id=WP_172676903.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2576857 2577879 . - . ID=gene-NLI98_RS12485;Name=NLI98_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12485;old_locus_tag=NLI98_12485 NZ_CP100601.1 Protein Homology CDS 2576857 2577879 . - 0 ID=cds-WP_004176158.1;Parent=gene-NLI98_RS12485;Dbxref=Genbank:WP_004176158.1;Name=WP_004176158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226976.1;locus_tag=NLI98_RS12485;product=LacI family transcriptional regulator;protein_id=WP_004176158.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2578224 2579177 . + . ID=gene-NLI98_RS12490;Name=NLI98_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12490;old_locus_tag=NLI98_12490 NZ_CP100601.1 Protein Homology CDS 2578224 2579177 . + 0 ID=cds-WP_004176159.1;Parent=gene-NLI98_RS12490;Dbxref=Genbank:WP_004176159.1;Name=WP_004176159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226974.1;locus_tag=NLI98_RS12490;product=substrate-binding domain-containing protein;protein_id=WP_004176159.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2579179 2580051 . - . ID=gene-NLI98_RS12495;Name=NLI98_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12495;old_locus_tag=NLI98_12495 NZ_CP100601.1 Protein Homology CDS 2579179 2580051 . - 0 ID=cds-WP_004213032.1;Parent=gene-NLI98_RS12495;Dbxref=Genbank:WP_004213032.1;Name=WP_004213032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226973.1;locus_tag=NLI98_RS12495;product=PfkB family carbohydrate kinase;protein_id=WP_004213032.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2580078 2580923 . + . ID=gene-NLI98_RS12500;Name=NLI98_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12500;old_locus_tag=NLI98_12500 NZ_CP100601.1 Protein Homology CDS 2580078 2580923 . + 0 ID=cds-WP_002904914.1;Parent=gene-NLI98_RS12500;Dbxref=Genbank:WP_002904914.1;Name=WP_002904914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226972.1;locus_tag=NLI98_RS12500;product=BtpA/SgcQ family protein;protein_id=WP_002904914.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2580923 2581567 . + . ID=gene-NLI98_RS12505;Name=NLI98_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12505;old_locus_tag=NLI98_12505 NZ_CP100601.1 Protein Homology CDS 2580923 2581567 . + 0 ID=cds-WP_002904912.1;Parent=gene-NLI98_RS12505;Dbxref=Genbank:WP_002904912.1;Name=WP_002904912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226971.1;locus_tag=NLI98_RS12505;product=TenA family protein;protein_id=WP_002904912.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2581620 2582492 . - . ID=gene-NLI98_RS12510;Name=NLI98_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12510;old_locus_tag=NLI98_12510 NZ_CP100601.1 Protein Homology CDS 2581620 2582492 . - 0 ID=cds-WP_064278763.1;Parent=gene-NLI98_RS12510;Dbxref=Genbank:WP_064278763.1;Name=WP_064278763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904909.1;locus_tag=NLI98_RS12510;product=alpha/beta fold hydrolase;protein_id=WP_064278763.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2582946 2583395 . + . ID=gene-NLI98_RS12515;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=NLI98_RS12515;old_locus_tag=NLI98_12515 NZ_CP100601.1 Protein Homology CDS 2582946 2583395 . + 0 ID=cds-WP_002904908.1;Parent=gene-NLI98_RS12515;Dbxref=Genbank:WP_002904908.1;Name=WP_002904908.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226969.1;locus_tag=NLI98_RS12515;product=peptidoglycan-binding protein LysM;protein_id=WP_002904908.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2583532 2584923 . - . ID=gene-NLI98_RS12520;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=NLI98_RS12520;old_locus_tag=NLI98_12520 NZ_CP100601.1 Protein Homology CDS 2583532 2584923 . - 0 ID=cds-WP_064278764.1;Parent=gene-NLI98_RS12520;Dbxref=Genbank:WP_064278764.1;Name=WP_064278764.1;gbkey=CDS;gene=pgtP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205872.1;locus_tag=NLI98_RS12520;product=phosphoglycerate transporter PgtP;protein_id=WP_064278764.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2585329 2586549 . + . ID=gene-NLI98_RS12525;Name=pgtC;gbkey=Gene;gene=pgtC;gene_biotype=protein_coding;locus_tag=NLI98_RS12525;old_locus_tag=NLI98_12525 NZ_CP100601.1 Protein Homology CDS 2585329 2586549 . + 0 ID=cds-WP_040222202.1;Parent=gene-NLI98_RS12525;Dbxref=Genbank:WP_040222202.1;Name=WP_040222202.1;gbkey=CDS;gene=pgtC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226964.1;locus_tag=NLI98_RS12525;product=phosphoglycerate transport regulator PgtC;protein_id=WP_040222202.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2586561 2588555 . + . ID=gene-NLI98_RS12530;Name=pgtB;gbkey=Gene;gene=pgtB;gene_biotype=protein_coding;locus_tag=NLI98_RS12530;old_locus_tag=NLI98_12530 NZ_CP100601.1 Protein Homology CDS 2586561 2588555 . + 0 ID=cds-WP_176398006.1;Parent=gene-NLI98_RS12530;Dbxref=Genbank:WP_176398006.1;Name=WP_176398006.1;gbkey=CDS;gene=pgtB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226963.1;locus_tag=NLI98_RS12530;product=two-component system sensor histidine kinase PgtB;protein_id=WP_176398006.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2588545 2589795 . + . ID=gene-NLI98_RS12535;Name=NLI98_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12535;old_locus_tag=NLI98_12535 NZ_CP100601.1 Protein Homology CDS 2588545 2589795 . + 0 ID=cds-WP_004179886.1;Parent=gene-NLI98_RS12535;Dbxref=Genbank:WP_004179886.1;Name=WP_004179886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226962.1;locus_tag=NLI98_RS12535;product=sigma-54 dependent transcriptional regulator;protein_id=WP_004179886.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2590044 2590585 . - . ID=gene-NLI98_RS12540;Name=NLI98_RS12540;end_range=2590585,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS12540;old_locus_tag=NLI98_12540;partial=true;pseudo=true NZ_CP100601.1 Protein Homology CDS 2590044 2590585 . - 0 ID=cds-NLI98_RS12540;Parent=gene-NLI98_RS12540;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2590585,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226960.1;locus_tag=NLI98_RS12540;partial=true;product=LysR substrate-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2590642 2591679 . - . ID=gene-NLI98_RS12545;Name=NLI98_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12545;old_locus_tag=NLI98_12545 NZ_CP100601.1 Protein Homology CDS 2590642 2591679 . - 0 ID=cds-WP_032446042.1;Parent=gene-NLI98_RS12545;Dbxref=Genbank:WP_032446042.1;Name=WP_032446042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831945.1;locus_tag=NLI98_RS12545;product=aldo/keto reductase;protein_id=WP_032446042.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2591936 2592085 . + . ID=gene-NLI98_RS12550;Name=NLI98_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12550;old_locus_tag=NLI98_12550 NZ_CP100601.1 Protein Homology CDS 2591936 2592085 . + 0 ID=cds-WP_015874800.1;Parent=gene-NLI98_RS12550;Dbxref=Genbank:WP_015874800.1;Name=WP_015874800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226954.1;locus_tag=NLI98_RS12550;product=hypothetical protein;protein_id=WP_015874800.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2592785 2593795 . - . ID=gene-NLI98_RS12555;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=NLI98_RS12555;old_locus_tag=NLI98_12555 NZ_CP100601.1 Protein Homology CDS 2592785 2593795 . - 0 ID=cds-WP_002904873.1;Parent=gene-NLI98_RS12555;Dbxref=Genbank:WP_002904873.1;Name=WP_002904873.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226952.1;locus_tag=NLI98_RS12555;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_002904873.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2593874 2594854 . - . ID=gene-NLI98_RS12560;Name=NLI98_RS12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12560;old_locus_tag=NLI98_12560 NZ_CP100601.1 Protein Homology CDS 2593874 2594854 . - 0 ID=cds-WP_088498176.1;Parent=gene-NLI98_RS12560;Dbxref=Genbank:WP_088498176.1;Name=WP_088498176.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226951.1;locus_tag=NLI98_RS12560;product=helix-turn-helix domain-containing protein;protein_id=WP_088498176.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2595016 2595387 . - . ID=gene-NLI98_RS12565;Name=NLI98_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12565;old_locus_tag=NLI98_12565 NZ_CP100601.1 Protein Homology CDS 2595016 2595387 . - 0 ID=cds-WP_004176172.1;Parent=gene-NLI98_RS12565;Dbxref=Genbank:WP_004176172.1;Name=WP_004176172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226950.1;locus_tag=NLI98_RS12565;product=DUF2255 family protein;protein_id=WP_004176172.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2595587 2596684 . - . ID=gene-NLI98_RS12570;Name=NLI98_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12570;old_locus_tag=NLI98_12570 NZ_CP100601.1 Protein Homology CDS 2595587 2596684 . - 0 ID=cds-WP_004221581.1;Parent=gene-NLI98_RS12570;Dbxref=Genbank:WP_004221581.1;Name=WP_004221581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226949.1;locus_tag=NLI98_RS12570;product=alpha/beta hydrolase;protein_id=WP_004221581.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2596714 2596953 . + . ID=gene-NLI98_RS12575;Name=NLI98_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12575;old_locus_tag=NLI98_12575 NZ_CP100601.1 Protein Homology CDS 2596714 2596953 . + 0 ID=cds-WP_002904864.1;Parent=gene-NLI98_RS12575;Dbxref=Genbank:WP_002904864.1;Name=WP_002904864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226948.1;locus_tag=NLI98_RS12575;product=hypothetical protein;protein_id=WP_002904864.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2597134 2598048 . + . ID=gene-NLI98_RS12580;Name=NLI98_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12580;old_locus_tag=NLI98_12580 NZ_CP100601.1 Protein Homology CDS 2597134 2598048 . + 0 ID=cds-WP_088498177.1;Parent=gene-NLI98_RS12580;Dbxref=Genbank:WP_088498177.1;Name=WP_088498177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226947.1;locus_tag=NLI98_RS12580;product=AraC family transcriptional regulator;protein_id=WP_088498177.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2598185 2598958 . - . ID=gene-NLI98_RS12585;Name=NLI98_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12585;old_locus_tag=NLI98_12585 NZ_CP100601.1 Protein Homology CDS 2598185 2598958 . - 0 ID=cds-WP_004213051.1;Parent=gene-NLI98_RS12585;Dbxref=Genbank:WP_004213051.1;Name=WP_004213051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226946.1;locus_tag=NLI98_RS12585;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_004213051.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2599020 2600525 . - . ID=gene-NLI98_RS12590;Name=NLI98_RS12590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS12590;old_locus_tag=NLI98_12590;pseudo=true NZ_CP100601.1 Protein Homology CDS 2599020 2600525 . - 0 ID=cds-NLI98_RS12590;Parent=gene-NLI98_RS12590;Note=internal stop;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226945.1;locus_tag=NLI98_RS12590;product=FGGY family carbohydrate kinase;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2600579 2601328 . - . ID=gene-NLI98_RS12595;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=NLI98_RS12595;old_locus_tag=NLI98_12595 NZ_CP100601.1 Protein Homology CDS 2600579 2601328 . - 0 ID=cds-WP_088498178.1;Parent=gene-NLI98_RS12595;Dbxref=Genbank:WP_088498178.1;Name=WP_088498178.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226944.1;locus_tag=NLI98_RS12595;product=deoxyribose-phosphate aldolase;protein_id=WP_088498178.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2601691 2602491 . + . ID=gene-NLI98_RS12600;Name=NLI98_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12600;old_locus_tag=NLI98_12600 NZ_CP100601.1 Protein Homology CDS 2601691 2602491 . + 0 ID=cds-WP_004143408.1;Parent=gene-NLI98_RS12600;Dbxref=Genbank:WP_004143408.1;Name=WP_004143408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226943.1;locus_tag=NLI98_RS12600;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_004143408.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2602601 2603290 . + . ID=gene-NLI98_RS12605;Name=alsE;gbkey=Gene;gene=alsE;gene_biotype=pseudogene;locus_tag=NLI98_RS12605;old_locus_tag=NLI98_12605;pseudo=true NZ_CP100601.1 Protein Homology CDS 2602601 2603290 . + 0 ID=cds-NLI98_RS12605;Parent=gene-NLI98_RS12605;Note=internal stop;gbkey=CDS;gene=alsE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226942.1;locus_tag=NLI98_RS12605;product=D-allulose 6-phosphate 3-epimerase;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2603302 2604243 . + . ID=gene-NLI98_RS12610;Name=NLI98_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12610;old_locus_tag=NLI98_12610 NZ_CP100601.1 Protein Homology CDS 2603302 2604243 . + 0 ID=cds-WP_088498179.1;Parent=gene-NLI98_RS12610;Dbxref=Genbank:WP_088498179.1;Name=WP_088498179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226941.1;locus_tag=NLI98_RS12610;product=ribokinase;protein_id=WP_088498179.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2604280 2605614 . + . ID=gene-NLI98_RS12615;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=NLI98_RS12615;old_locus_tag=NLI98_12615 NZ_CP100601.1 Protein Homology CDS 2604280 2605614 . + 0 ID=cds-WP_002904849.1;Parent=gene-NLI98_RS12615;Dbxref=Genbank:WP_002904849.1;Name=WP_002904849.1;Ontology_term=GO:0015756,GO:0015535,GO:0005886;gbkey=CDS;gene=fucP;go_component=plasma membrane|0005886||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654976.1;locus_tag=NLI98_RS12615;product=L-fucose:H+ symporter permease;protein_id=WP_002904849.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2605616 2606005 . + . ID=gene-NLI98_RS12620;Name=NLI98_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12620;old_locus_tag=NLI98_12620 NZ_CP100601.1 Protein Homology CDS 2605616 2606005 . + 0 ID=cds-WP_004143416.1;Parent=gene-NLI98_RS12620;Dbxref=Genbank:WP_004143416.1;Name=WP_004143416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226938.1;locus_tag=NLI98_RS12620;product=VOC family protein;protein_id=WP_004143416.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2606254 2607810 . + . ID=gene-NLI98_RS12625;Name=NLI98_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12625;old_locus_tag=NLI98_12625 NZ_CP100601.1 Protein Homology CDS 2606254 2607810 . + 0 ID=cds-WP_002904845.1;Parent=gene-NLI98_RS12625;Dbxref=Genbank:WP_002904845.1;Name=WP_002904845.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.2;locus_tag=NLI98_RS12625;product=acyl--CoA ligase;protein_id=WP_002904845.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2607807 2609399 . + . ID=gene-NLI98_RS12630;Name=NLI98_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12630;old_locus_tag=NLI98_12630 NZ_CP100601.1 Protein Homology CDS 2607807 2609399 . + 0 ID=cds-WP_004179836.1;Parent=gene-NLI98_RS12630;Dbxref=Genbank:WP_004179836.1;Name=WP_004179836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226936.1;locus_tag=NLI98_RS12630;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_004179836.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2609411 2610145 . + . ID=gene-NLI98_RS12635;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=NLI98_RS12635;old_locus_tag=NLI98_12635 NZ_CP100601.1 Protein Homology CDS 2609411 2610145 . + 0 ID=cds-WP_088498180.1;Parent=gene-NLI98_RS12635;Dbxref=Genbank:WP_088498180.1;Name=WP_088498180.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226935.1;locus_tag=NLI98_RS12635;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_088498180.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2610157 2611347 . + . ID=gene-NLI98_RS12640;Name=NLI98_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12640;old_locus_tag=NLI98_12640 NZ_CP100601.1 Protein Homology CDS 2610157 2611347 . + 0 ID=cds-WP_004179834.1;Parent=gene-NLI98_RS12640;Dbxref=Genbank:WP_004179834.1;Name=WP_004179834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226934.1;locus_tag=NLI98_RS12640;product=thiolase family protein;protein_id=WP_004179834.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2611483 2612820 . + . ID=gene-NLI98_RS12645;Name=NLI98_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12645;old_locus_tag=NLI98_12645 NZ_CP100601.1 Protein Homology CDS 2611483 2612820 . + 0 ID=cds-WP_004891980.1;Parent=gene-NLI98_RS12645;Dbxref=Genbank:WP_004891980.1;Name=WP_004891980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946371.1;locus_tag=NLI98_RS12645;product=MFS transporter;protein_id=WP_004891980.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2612834 2613712 . + . ID=gene-NLI98_RS12650;Name=NLI98_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12650;old_locus_tag=NLI98_12650 NZ_CP100601.1 Protein Homology CDS 2612834 2613712 . + 0 ID=cds-WP_075394900.1;Parent=gene-NLI98_RS12650;Dbxref=Genbank:WP_075394900.1;Name=WP_075394900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226931.1;locus_tag=NLI98_RS12650;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_075394900.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2613789 2615159 . + . ID=gene-NLI98_RS12655;Name=NLI98_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12655;old_locus_tag=NLI98_12655 NZ_CP100601.1 Protein Homology CDS 2613789 2615159 . + 0 ID=cds-WP_004176181.1;Parent=gene-NLI98_RS12655;Dbxref=Genbank:WP_004176181.1;Name=WP_004176181.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226930.1;locus_tag=NLI98_RS12655;product=MFS transporter;protein_id=WP_004176181.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2615173 2616348 . + . ID=gene-NLI98_RS12660;Name=NLI98_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12660;old_locus_tag=NLI98_12660 NZ_CP100601.1 Protein Homology CDS 2615173 2616348 . + 0 ID=cds-WP_064278769.1;Parent=gene-NLI98_RS12660;Dbxref=Genbank:WP_064278769.1;Name=WP_064278769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226929.1;locus_tag=NLI98_RS12660;product=glycerate kinase;protein_id=WP_064278769.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2616345 2617502 . + . ID=gene-NLI98_RS12665;Name=NLI98_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12665;old_locus_tag=NLI98_12665 NZ_CP100601.1 Protein Homology CDS 2616345 2617502 . + 0 ID=cds-WP_002904834.1;Parent=gene-NLI98_RS12665;Dbxref=Genbank:WP_002904834.1;Name=WP_002904834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226928.1;locus_tag=NLI98_RS12665;product=helix-turn-helix domain-containing protein;protein_id=WP_002904834.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2617585 2618460 . - . ID=gene-NLI98_RS12670;Name=NLI98_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12670;old_locus_tag=NLI98_12670 NZ_CP100601.1 Protein Homology CDS 2617585 2618460 . - 0 ID=cds-WP_264452333.1;Parent=gene-NLI98_RS12670;Dbxref=Genbank:WP_264452333.1;Name=WP_264452333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226927.1;locus_tag=NLI98_RS12670;product=NAD(P)-dependent oxidoreductase;protein_id=WP_264452333.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2618572 2619456 . - . ID=gene-NLI98_RS12675;Name=NLI98_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12675;old_locus_tag=NLI98_12675 NZ_CP100601.1 Protein Homology CDS 2618572 2619456 . - 0 ID=cds-WP_004179829.1;Parent=gene-NLI98_RS12675;Dbxref=Genbank:WP_004179829.1;Name=WP_004179829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226926.1;locus_tag=NLI98_RS12675;product=LysR family transcriptional regulator;protein_id=WP_004179829.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2619568 2620311 . + . ID=gene-NLI98_RS12680;Name=NLI98_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12680;old_locus_tag=NLI98_12680 NZ_CP100601.1 Protein Homology CDS 2619568 2620311 . + 0 ID=cds-WP_032418971.1;Parent=gene-NLI98_RS12680;Dbxref=Genbank:WP_032418971.1;Name=WP_032418971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226925.1;locus_tag=NLI98_RS12680;product=sulfite exporter TauE/SafE family protein;protein_id=WP_032418971.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2620317 2621015 . - . ID=gene-NLI98_RS12685;Name=NLI98_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12685;old_locus_tag=NLI98_12685 NZ_CP100601.1 Protein Homology CDS 2620317 2621015 . - 0 ID=cds-WP_002904825.1;Parent=gene-NLI98_RS12685;Dbxref=Genbank:WP_002904825.1;Name=WP_002904825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226924.1;locus_tag=NLI98_RS12685;product=GntR family transcriptional regulator;protein_id=WP_002904825.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2621283 2622815 . + . ID=gene-NLI98_RS12690;Name=NLI98_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12690;old_locus_tag=NLI98_12690 NZ_CP100601.1 Protein Homology CDS 2621283 2622815 . + 0 ID=cds-WP_016946376.1;Parent=gene-NLI98_RS12690;Dbxref=Genbank:WP_016946376.1;Name=WP_016946376.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226923.1;locus_tag=NLI98_RS12690;product=PTS transporter subunit EIIC;protein_id=WP_016946376.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2622827 2624155 . + . ID=gene-NLI98_RS12695;Name=NLI98_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12695;old_locus_tag=NLI98_12695 NZ_CP100601.1 Protein Homology CDS 2622827 2624155 . + 0 ID=cds-WP_004151635.1;Parent=gene-NLI98_RS12695;Dbxref=Genbank:WP_004151635.1;Name=WP_004151635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226922.1;locus_tag=NLI98_RS12695;product=6-phospho-alpha-glucosidase;protein_id=WP_004151635.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2624901 2626346 . + . ID=gene-NLI98_RS12700;Name=NLI98_RS12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12700;old_locus_tag=NLI98_12700 NZ_CP100601.1 Protein Homology CDS 2624901 2626346 . + 0 ID=cds-WP_004143440.1;Parent=gene-NLI98_RS12700;Dbxref=Genbank:WP_004143440.1;Name=WP_004143440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226920.1;locus_tag=NLI98_RS12700;product=sugar porter family MFS transporter;protein_id=WP_004143440.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2626336 2626779 . + . ID=gene-NLI98_RS12705;Name=NLI98_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12705;old_locus_tag=NLI98_12705 NZ_CP100601.1 Protein Homology CDS 2626336 2626779 . + 0 ID=cds-WP_002904819.1;Parent=gene-NLI98_RS12705;Dbxref=Genbank:WP_002904819.1;Name=WP_002904819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226919.1;locus_tag=NLI98_RS12705;product=PTS sugar transporter subunit IIA;protein_id=WP_002904819.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2627196 2627435 . + . ID=gene-NLI98_RS12710;Name=NLI98_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12710;old_locus_tag=NLI98_12710 NZ_CP100601.1 Protein Homology CDS 2627196 2627435 . + 0 ID=cds-WP_088498181.1;Parent=gene-NLI98_RS12710;Dbxref=Genbank:WP_088498181.1;Name=WP_088498181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226917.1;locus_tag=NLI98_RS12710;product=hypothetical protein;protein_id=WP_088498181.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2627460 2627600 . + . ID=gene-NLI98_RS12715;Name=NLI98_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12715;old_locus_tag=NLI98_12715 NZ_CP100601.1 Protein Homology CDS 2627460 2627600 . + 0 ID=cds-WP_002904814.1;Parent=gene-NLI98_RS12715;Dbxref=Genbank:WP_002904814.1;Name=WP_002904814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226916.1;locus_tag=NLI98_RS12715;product=hypothetical protein;protein_id=WP_002904814.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2627788 2628723 . + . ID=gene-NLI98_RS12720;Name=iroE;gbkey=Gene;gene=iroE;gene_biotype=protein_coding;locus_tag=NLI98_RS12720;old_locus_tag=NLI98_12720 NZ_CP100601.1 Protein Homology CDS 2627788 2628723 . + 0 ID=cds-WP_048999758.1;Parent=gene-NLI98_RS12720;Dbxref=Genbank:WP_048999758.1;Name=WP_048999758.1;gbkey=CDS;gene=iroE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190148.1;locus_tag=NLI98_RS12720;product=siderophore esterase IroE;protein_id=WP_048999758.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2628757 2630412 . - . ID=gene-NLI98_RS12725;Name=NLI98_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12725;old_locus_tag=NLI98_12725 NZ_CP100601.1 Protein Homology CDS 2628757 2630412 . - 0 ID=cds-WP_004143447.1;Parent=gene-NLI98_RS12725;Dbxref=Genbank:WP_004143447.1;Name=WP_004143447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226913.1;locus_tag=NLI98_RS12725;product=EAL domain-containing protein;protein_id=WP_004143447.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2630709 2630957 . + . ID=gene-NLI98_RS12730;Name=NLI98_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12730;old_locus_tag=NLI98_12730 NZ_CP100601.1 Protein Homology CDS 2630709 2630957 . + 0 ID=cds-WP_002904810.1;Parent=gene-NLI98_RS12730;Dbxref=Genbank:WP_002904810.1;Name=WP_002904810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226912.1;locus_tag=NLI98_RS12730;product=hypothetical protein;protein_id=WP_002904810.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2631247 2631465 . + . ID=gene-NLI98_RS12735;Name=NLI98_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12735;old_locus_tag=NLI98_12735 NZ_CP100601.1 Protein Homology CDS 2631247 2631465 . + 0 ID=cds-WP_002904808.1;Parent=gene-NLI98_RS12735;Dbxref=Genbank:WP_002904808.1;Name=WP_002904808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226911.1;locus_tag=NLI98_RS12735;product=ParD-like family protein;protein_id=WP_002904808.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2631446 2632228 . + . ID=gene-NLI98_RS12740;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=NLI98_RS12740;old_locus_tag=NLI98_12740 NZ_CP100601.1 Protein Homology CDS 2631446 2632228 . + 0 ID=cds-WP_004179825.1;Parent=gene-NLI98_RS12740;Dbxref=Genbank:WP_004179825.1;Name=WP_004179825.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226910.1;locus_tag=NLI98_RS12740;product=type I methionyl aminopeptidase;protein_id=WP_004179825.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2632455 2632742 . - . ID=gene-NLI98_RS12745;Name=NLI98_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12745;old_locus_tag=NLI98_12745 NZ_CP100601.1 GeneMarkS-2+ CDS 2632455 2632742 . - 0 ID=cds-WP_004176193.1;Parent=gene-NLI98_RS12745;Dbxref=Genbank:WP_004176193.1;Name=WP_004176193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS12745;product=hypothetical protein;protein_id=WP_004176193.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2633188 2633751 . + . ID=gene-NLI98_RS12750;Name=NLI98_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12750;old_locus_tag=NLI98_12750 NZ_CP100601.1 Protein Homology CDS 2633188 2633751 . + 0 ID=cds-WP_004143457.1;Parent=gene-NLI98_RS12750;Dbxref=Genbank:WP_004143457.1;Name=WP_004143457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226908.1;locus_tag=NLI98_RS12750;product=type 1 fimbrial protein;protein_id=WP_004143457.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2633828 2634523 . + . ID=gene-NLI98_RS12755;Name=NLI98_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12755;old_locus_tag=NLI98_12755 NZ_CP100601.1 Protein Homology CDS 2633828 2634523 . + 0 ID=cds-WP_004213066.1;Parent=gene-NLI98_RS12755;Dbxref=Genbank:WP_004213066.1;Name=WP_004213066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226907.1;locus_tag=NLI98_RS12755;product=molecular chaperone;protein_id=WP_004213066.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2634539 2637040 . + . ID=gene-NLI98_RS12760;Name=NLI98_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12760;old_locus_tag=NLI98_12760 NZ_CP100601.1 Protein Homology CDS 2634539 2637040 . + 0 ID=cds-WP_088498182.1;Parent=gene-NLI98_RS12760;Dbxref=Genbank:WP_088498182.1;Name=WP_088498182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226906.1;locus_tag=NLI98_RS12760;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_088498182.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2637028 2638032 . + . ID=gene-NLI98_RS12765;Name=NLI98_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12765;old_locus_tag=NLI98_12765 NZ_CP100601.1 Protein Homology CDS 2637028 2638032 . + 0 ID=cds-WP_004176196.1;Parent=gene-NLI98_RS12765;Dbxref=Genbank:WP_004176196.1;Name=WP_004176196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904798.1;locus_tag=NLI98_RS12765;product=type 1 fimbrial protein;protein_id=WP_004176196.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2638174 2639466 . + . ID=gene-NLI98_RS12770;Name=NLI98_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12770;old_locus_tag=NLI98_12770 NZ_CP100601.1 Protein Homology CDS 2638174 2639466 . + 0 ID=cds-WP_002904794.1;Parent=gene-NLI98_RS12770;Dbxref=Genbank:WP_002904794.1;Name=WP_002904794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226903.1;locus_tag=NLI98_RS12770;product=glycoside hydrolase family 10 protein;protein_id=WP_002904794.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2639483 2640805 . - . ID=gene-NLI98_RS12775;Name=NLI98_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12775;old_locus_tag=NLI98_12775 NZ_CP100601.1 Protein Homology CDS 2639483 2640805 . - 0 ID=cds-WP_004176197.1;Parent=gene-NLI98_RS12775;Dbxref=Genbank:WP_004176197.1;Name=WP_004176197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226902.1;locus_tag=NLI98_RS12775;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_004176197.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2640805 2641071 . - . ID=gene-NLI98_RS12780;Name=hipB;gbkey=Gene;gene=hipB;gene_biotype=protein_coding;locus_tag=NLI98_RS12780;old_locus_tag=NLI98_12780 NZ_CP100601.1 Protein Homology CDS 2640805 2641071 . - 0 ID=cds-WP_002904790.1;Parent=gene-NLI98_RS12780;Dbxref=Genbank:WP_002904790.1;Name=WP_002904790.1;gbkey=CDS;gene=hipB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226901.1;locus_tag=NLI98_RS12780;product=type II toxin-antitoxin system antitoxin HipB;protein_id=WP_002904790.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2641336 2641662 . - . ID=gene-NLI98_RS12785;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=protein_coding;locus_tag=NLI98_RS12785;old_locus_tag=NLI98_12785 NZ_CP100601.1 Protein Homology CDS 2641336 2641662 . - 0 ID=cds-WP_002904788.1;Parent=gene-NLI98_RS12785;Dbxref=Genbank:WP_002904788.1;Name=WP_002904788.1;Ontology_term=GO:0019628;gbkey=CDS;gene=uraH;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226900.1;locus_tag=NLI98_RS12785;product=hydroxyisourate hydrolase;protein_id=WP_002904788.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2641659 2642159 . - . ID=gene-NLI98_RS12790;Name=uraD;gbkey=Gene;gene=uraD;gene_biotype=protein_coding;locus_tag=NLI98_RS12790;old_locus_tag=NLI98_12790 NZ_CP100601.1 Protein Homology CDS 2641659 2642159 . - 0 ID=cds-WP_002904787.1;Parent=gene-NLI98_RS12790;Dbxref=Genbank:WP_002904787.1;Name=WP_002904787.1;Ontology_term=GO:0019628;gbkey=CDS;gene=uraD;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226899.1;locus_tag=NLI98_RS12790;product=2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase;protein_id=WP_002904787.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2642137 2643516 . - . ID=gene-NLI98_RS12795;Name=NLI98_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12795;old_locus_tag=NLI98_12795 NZ_CP100601.1 Protein Homology CDS 2642137 2643516 . - 0 ID=cds-WP_004215088.1;Parent=gene-NLI98_RS12795;Dbxref=Genbank:WP_004215088.1;Name=WP_004215088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226898.1;locus_tag=NLI98_RS12795;product=purine permease;protein_id=WP_004215088.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2643862 2645016 . + . ID=gene-NLI98_RS12800;Name=hpxO;gbkey=Gene;gene=hpxO;gene_biotype=protein_coding;locus_tag=NLI98_RS12800;old_locus_tag=NLI98_12800 NZ_CP100601.1 Protein Homology CDS 2643862 2645016 . + 0 ID=cds-WP_002904783.1;Parent=gene-NLI98_RS12800;Dbxref=Genbank:WP_002904783.1;Name=WP_002904783.1;Ontology_term=GO:0071949;gbkey=CDS;gene=hpxO;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226897.1;locus_tag=NLI98_RS12800;product=FAD-dependent urate hydroxylase HpxO;protein_id=WP_002904783.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2644997 2645920 . - . ID=gene-NLI98_RS12805;Name=hpxR;gbkey=Gene;gene=hpxR;gene_biotype=protein_coding;locus_tag=NLI98_RS12805;old_locus_tag=NLI98_12805 NZ_CP100601.1 Protein Homology CDS 2644997 2645920 . - 0 ID=cds-WP_002904781.1;Parent=gene-NLI98_RS12805;Dbxref=Genbank:WP_002904781.1;Name=WP_002904781.1;gbkey=CDS;gene=hpxR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226896.1;locus_tag=NLI98_RS12805;product=LysR family hpxDE operon transcriptional regulator HpxR;protein_id=WP_002904781.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2646046 2647083 . + . ID=gene-NLI98_RS12810;Name=hpxD;gbkey=Gene;gene=hpxD;gene_biotype=protein_coding;locus_tag=NLI98_RS12810;old_locus_tag=NLI98_12810 NZ_CP100601.1 Protein Homology CDS 2646046 2647083 . + 0 ID=cds-WP_002904779.1;Parent=gene-NLI98_RS12810;Dbxref=Genbank:WP_002904779.1;Name=WP_002904779.1;gbkey=CDS;gene=hpxD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226895.1;locus_tag=NLI98_RS12810;product=molybdenum cofactor-independent xanthine hydroxylase subunit HpxD;protein_id=WP_002904779.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2647095 2648069 . + . ID=gene-NLI98_RS12815;Name=hpxE;gbkey=Gene;gene=hpxE;gene_biotype=protein_coding;locus_tag=NLI98_RS12815;old_locus_tag=NLI98_12815 NZ_CP100601.1 Protein Homology CDS 2647095 2648069 . + 0 ID=cds-WP_023285112.1;Parent=gene-NLI98_RS12815;Dbxref=Genbank:WP_023285112.1;Name=WP_023285112.1;gbkey=CDS;gene=hpxE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226894.1;locus_tag=NLI98_RS12815;product=molybdenum cofactor-independent xanthine hydroxylase subunit HpxE;protein_id=WP_023285112.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2648046 2649284 . - . ID=gene-NLI98_RS12820;Name=NLI98_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12820;old_locus_tag=NLI98_12820 NZ_CP100601.1 Protein Homology CDS 2648046 2649284 . - 0 ID=cds-WP_023328592.1;Parent=gene-NLI98_RS12820;Dbxref=Genbank:WP_023328592.1;Name=WP_023328592.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226893.1;locus_tag=NLI98_RS12820;product=MFS transporter;protein_id=WP_023328592.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2649390 2650334 . + . ID=gene-NLI98_RS12825;Name=NLI98_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12825;old_locus_tag=NLI98_12825 NZ_CP100601.1 Protein Homology CDS 2649390 2650334 . + 0 ID=cds-WP_004190181.1;Parent=gene-NLI98_RS12825;Dbxref=Genbank:WP_004190181.1;Name=WP_004190181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226892.1;locus_tag=NLI98_RS12825;product=AraC family transcriptional regulator;protein_id=WP_004190181.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2650344 2651099 . - . ID=gene-NLI98_RS12830;Name=NLI98_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12830;old_locus_tag=NLI98_12830 NZ_CP100601.1 Protein Homology CDS 2650344 2651099 . - 0 ID=cds-WP_032103224.1;Parent=gene-NLI98_RS12830;Dbxref=Genbank:WP_032103224.1;Name=WP_032103224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226891.1;locus_tag=NLI98_RS12830;product=VOC family protein;protein_id=WP_032103224.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2651276 2651587 . - . ID=gene-NLI98_RS12835;Name=NLI98_RS12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12835;old_locus_tag=NLI98_12835 NZ_CP100601.1 Protein Homology CDS 2651276 2651587 . - 0 ID=cds-WP_004143501.1;Parent=gene-NLI98_RS12835;Dbxref=Genbank:WP_004143501.1;Name=WP_004143501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226890.1;locus_tag=NLI98_RS12835;product=cupin;protein_id=WP_004143501.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2651609 2651872 . - . ID=gene-NLI98_RS12840;Name=NLI98_RS12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12840;old_locus_tag=NLI98_12840 NZ_CP100601.1 Protein Homology CDS 2651609 2651872 . - 0 ID=cds-WP_002904643.1;Parent=gene-NLI98_RS12840;Dbxref=Genbank:WP_002904643.1;Name=WP_002904643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226889.1;locus_tag=NLI98_RS12840;product=VF530 family protein;protein_id=WP_002904643.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2652155 2653183 . + . ID=gene-NLI98_RS12845;Name=NLI98_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12845;old_locus_tag=NLI98_12845 NZ_CP100601.1 Protein Homology CDS 2652155 2653183 . + 0 ID=cds-WP_004143503.1;Parent=gene-NLI98_RS12845;Dbxref=Genbank:WP_004143503.1;Name=WP_004143503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226888.1;locus_tag=NLI98_RS12845;product=isopenicillin N synthase family oxygenase;protein_id=WP_004143503.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2653207 2654013 . + . ID=gene-NLI98_RS12850;Name=NLI98_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12850;old_locus_tag=NLI98_12850 NZ_CP100601.1 Protein Homology CDS 2653207 2654013 . + 0 ID=cds-WP_004143504.1;Parent=gene-NLI98_RS12850;Dbxref=Genbank:WP_004143504.1;Name=WP_004143504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226887.1;locus_tag=NLI98_RS12850;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_004143504.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2654010 2654801 . + . ID=gene-NLI98_RS12855;Name=NLI98_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12855;old_locus_tag=NLI98_12855 NZ_CP100601.1 Protein Homology CDS 2654010 2654801 . + 0 ID=cds-WP_004176216.1;Parent=gene-NLI98_RS12855;Dbxref=Genbank:WP_004176216.1;Name=WP_004176216.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226886.1;locus_tag=NLI98_RS12855;product=ATP-binding cassette domain-containing protein;protein_id=WP_004176216.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2654798 2655457 . + . ID=gene-NLI98_RS12860;Name=NLI98_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12860;old_locus_tag=NLI98_12860 NZ_CP100601.1 Protein Homology CDS 2654798 2655457 . + 0 ID=cds-WP_072196916.1;Parent=gene-NLI98_RS12860;Dbxref=Genbank:WP_072196916.1;Name=WP_072196916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226885.1;locus_tag=NLI98_RS12860;product=ABC transporter permease;protein_id=WP_072196916.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2655468 2656526 . - . ID=gene-NLI98_RS12865;Name=NLI98_RS12865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12865;old_locus_tag=NLI98_12865 NZ_CP100601.1 Protein Homology CDS 2655468 2656526 . - 0 ID=cds-WP_032417445.1;Parent=gene-NLI98_RS12865;Dbxref=Genbank:WP_032417445.1;Name=WP_032417445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009308893.1;locus_tag=NLI98_RS12865;product=nitronate monooxygenase;protein_id=WP_032417445.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2656616 2657461 . + . ID=gene-NLI98_RS12870;Name=NLI98_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12870;old_locus_tag=NLI98_12870 NZ_CP100601.1 Protein Homology CDS 2656616 2657461 . + 0 ID=cds-WP_004143508.1;Parent=gene-NLI98_RS12870;Dbxref=Genbank:WP_004143508.1;Name=WP_004143508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004143508.1;locus_tag=NLI98_RS12870;product=LysR family transcriptional regulator;protein_id=WP_004143508.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2657458 2658615 . - . ID=gene-NLI98_RS12875;Name=NLI98_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12875;old_locus_tag=NLI98_12875 NZ_CP100601.1 Protein Homology CDS 2657458 2658615 . - 0 ID=cds-WP_004213417.1;Parent=gene-NLI98_RS12875;Dbxref=Genbank:WP_004213417.1;Name=WP_004213417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226881.1;locus_tag=NLI98_RS12875;product=YbfB/YjiJ family MFS transporter;protein_id=WP_004213417.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2658823 2659245 . + . ID=gene-NLI98_RS12880;Name=NLI98_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12880;old_locus_tag=NLI98_12880 NZ_CP100601.1 Protein Homology CDS 2658823 2659245 . + 0 ID=cds-WP_004176219.1;Parent=gene-NLI98_RS12880;Dbxref=Genbank:WP_004176219.1;Name=WP_004176219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226880.1;locus_tag=NLI98_RS12880;product=hypothetical protein;protein_id=WP_004176219.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2659401 2660588 . + . ID=gene-NLI98_RS12885;Name=NLI98_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12885;old_locus_tag=NLI98_12885 NZ_CP100601.1 Protein Homology CDS 2659401 2660588 . + 0 ID=cds-WP_004176220.1;Parent=gene-NLI98_RS12885;Dbxref=Genbank:WP_004176220.1;Name=WP_004176220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226879.1;locus_tag=NLI98_RS12885;product=MFS transporter;protein_id=WP_004176220.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2660817 2661107 . + . ID=gene-NLI98_RS12890;Name=NLI98_RS12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12890;old_locus_tag=NLI98_12890 NZ_CP100601.1 Protein Homology CDS 2660817 2661107 . + 0 ID=cds-WP_002904624.1;Parent=gene-NLI98_RS12890;Dbxref=Genbank:WP_002904624.1;Name=WP_002904624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226878.1;locus_tag=NLI98_RS12890;product=hypothetical protein;protein_id=WP_002904624.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2661316 2662077 . + . ID=gene-NLI98_RS12895;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=NLI98_RS12895;old_locus_tag=NLI98_12895 NZ_CP100601.1 Protein Homology CDS 2661316 2662077 . + 0 ID=cds-WP_004176221.1;Parent=gene-NLI98_RS12895;Dbxref=Genbank:WP_004176221.1;Name=WP_004176221.1;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226877.1;locus_tag=NLI98_RS12895;product=trans-aconitate 2-methyltransferase;protein_id=WP_004176221.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2662238 2662558 . + . ID=gene-NLI98_RS12900;Name=NLI98_RS12900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12900;old_locus_tag=NLI98_12900 NZ_CP100601.1 Protein Homology CDS 2662238 2662558 . + 0 ID=cds-WP_004143517.1;Parent=gene-NLI98_RS12900;Dbxref=Genbank:WP_004143517.1;Name=WP_004143517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226876.1;locus_tag=NLI98_RS12900;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_004143517.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2662549 2662874 . + . ID=gene-NLI98_RS12905;Name=NLI98_RS12905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS12905;old_locus_tag=NLI98_12905;pseudo=true NZ_CP100601.1 Protein Homology CDS 2662549 2662874 . + 0 ID=cds-NLI98_RS12905;Parent=gene-NLI98_RS12905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226875.1;locus_tag=NLI98_RS12905;product=tautomerase family protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2663085 2663531 . - . ID=gene-NLI98_RS12910;Name=NLI98_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12910;old_locus_tag=NLI98_12910 NZ_CP100601.1 Protein Homology CDS 2663085 2663531 . - 0 ID=cds-WP_002904604.1;Parent=gene-NLI98_RS12910;Dbxref=Genbank:WP_002904604.1;Name=WP_002904604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226871.1;locus_tag=NLI98_RS12910;product=GNAT family N-acetyltransferase;protein_id=WP_002904604.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2663785 2665236 . - . ID=gene-NLI98_RS12915;Name=NLI98_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12915;old_locus_tag=NLI98_12915 NZ_CP100601.1 Protein Homology CDS 2663785 2665236 . - 0 ID=cds-WP_009485264.1;Parent=gene-NLI98_RS12915;Dbxref=Genbank:WP_009485264.1;Name=WP_009485264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226870.1;locus_tag=NLI98_RS12915;product=tagaturonate reductase;protein_id=WP_009485264.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2665350 2665880 . - . ID=gene-NLI98_RS12920;Name=NLI98_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12920;old_locus_tag=NLI98_12920 NZ_CP100601.1 Protein Homology CDS 2665350 2665880 . - 0 ID=cds-WP_002904601.1;Parent=gene-NLI98_RS12920;Dbxref=Genbank:WP_002904601.1;Name=WP_002904601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226869.1;locus_tag=NLI98_RS12920;product=GNAT family N-acetyltransferase;protein_id=WP_002904601.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2665958 2667382 . - . ID=gene-NLI98_RS12925;Name=NLI98_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12925;old_locus_tag=NLI98_12925 NZ_CP100601.1 Protein Homology CDS 2665958 2667382 . - 0 ID=cds-WP_004148352.1;Parent=gene-NLI98_RS12925;Dbxref=Genbank:WP_004148352.1;Name=WP_004148352.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226868.1;locus_tag=NLI98_RS12925;product=sensor domain-containing diguanylate cyclase;protein_id=WP_004148352.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2667497 2667865 . - . ID=gene-NLI98_RS12930;Name=NLI98_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12930;old_locus_tag=NLI98_12930 NZ_CP100601.1 Protein Homology CDS 2667497 2667865 . - 0 ID=cds-WP_088498183.1;Parent=gene-NLI98_RS12930;Dbxref=Genbank:WP_088498183.1;Name=WP_088498183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226867.1;locus_tag=NLI98_RS12930;product=DUF4186 domain-containing protein;protein_id=WP_088498183.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2667865 2668791 . - . ID=gene-NLI98_RS12935;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=NLI98_RS12935;old_locus_tag=NLI98_12935 NZ_CP100601.1 Protein Homology CDS 2667865 2668791 . - 0 ID=cds-WP_004179782.1;Parent=gene-NLI98_RS12935;Dbxref=Genbank:WP_004179782.1;Name=WP_004179782.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226866.1;locus_tag=NLI98_RS12935;product=glutaminase B;protein_id=WP_004179782.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2668872 2670260 . - . ID=gene-NLI98_RS12940;Name=sad;gbkey=Gene;gene=sad;gene_biotype=protein_coding;locus_tag=NLI98_RS12940;old_locus_tag=NLI98_12940 NZ_CP100601.1 Protein Homology CDS 2668872 2670260 . - 0 ID=cds-WP_172676882.1;Parent=gene-NLI98_RS12940;Dbxref=Genbank:WP_172676882.1;Name=WP_172676882.1;Ontology_term=GO:0004030;gbkey=CDS;gene=sad;go_function=aldehyde dehydrogenase [NAD(P)+] activity|0004030||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226865.1;locus_tag=NLI98_RS12940;product=succinate-semialdehyde dehydrogenase;protein_id=WP_172676882.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2670362 2671240 . + . ID=gene-NLI98_RS12945;Name=NLI98_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12945;old_locus_tag=NLI98_12945 NZ_CP100601.1 Protein Homology CDS 2670362 2671240 . + 0 ID=cds-WP_004143535.1;Parent=gene-NLI98_RS12945;Dbxref=Genbank:WP_004143535.1;Name=WP_004143535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226864.1;locus_tag=NLI98_RS12945;product=LysR family transcriptional regulator;protein_id=WP_004143535.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2671194 2671676 . - . ID=gene-NLI98_RS12950;Name=NLI98_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12950;old_locus_tag=NLI98_12950 NZ_CP100601.1 Protein Homology CDS 2671194 2671676 . - 0 ID=cds-WP_002904493.1;Parent=gene-NLI98_RS12950;Dbxref=Genbank:WP_002904493.1;Name=WP_002904493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226863.1;locus_tag=NLI98_RS12950;product=GNAT family N-acetyltransferase;protein_id=WP_002904493.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2671821 2672765 . + . ID=gene-NLI98_RS12955;Name=NLI98_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12955;old_locus_tag=NLI98_12955 NZ_CP100601.1 Protein Homology CDS 2671821 2672765 . + 0 ID=cds-WP_002904491.1;Parent=gene-NLI98_RS12955;Dbxref=Genbank:WP_002904491.1;Name=WP_002904491.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226862.1;locus_tag=NLI98_RS12955;product=L-lactate dehydrogenase;protein_id=WP_002904491.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2672780 2673541 . - . ID=gene-NLI98_RS12960;Name=NLI98_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12960;old_locus_tag=NLI98_12960 NZ_CP100601.1 Protein Homology CDS 2672780 2673541 . - 0 ID=cds-WP_002904489.1;Parent=gene-NLI98_RS12960;Dbxref=Genbank:WP_002904489.1;Name=WP_002904489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226861.1;locus_tag=NLI98_RS12960;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_002904489.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2673543 2674529 . - . ID=gene-NLI98_RS12965;Name=NLI98_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12965;old_locus_tag=NLI98_12965 NZ_CP100601.1 Protein Homology CDS 2673543 2674529 . - 0 ID=cds-WP_009308909.1;Parent=gene-NLI98_RS12965;Dbxref=Genbank:WP_009308909.1;Name=WP_009308909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226860.1;locus_tag=NLI98_RS12965;product=D-threonate 4-phosphate dehydrogenase;protein_id=WP_009308909.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2674522 2675757 . - . ID=gene-NLI98_RS12970;Name=NLI98_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12970;old_locus_tag=NLI98_12970 NZ_CP100601.1 Protein Homology CDS 2674522 2675757 . - 0 ID=cds-WP_032424955.1;Parent=gene-NLI98_RS12970;Dbxref=Genbank:WP_032424955.1;Name=WP_032424955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226859.1;locus_tag=NLI98_RS12970;product=four-carbon acid sugar kinase family protein;protein_id=WP_032424955.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2675932 2677080 . + . ID=gene-NLI98_RS12975;Name=NLI98_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12975;old_locus_tag=NLI98_12975 NZ_CP100601.1 Protein Homology CDS 2675932 2677080 . + 0 ID=cds-WP_004183982.1;Parent=gene-NLI98_RS12975;Dbxref=Genbank:WP_004183982.1;Name=WP_004183982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226858.1;locus_tag=NLI98_RS12975;product=iron-containing alcohol dehydrogenase;protein_id=WP_004183982.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2677095 2677979 . + . ID=gene-NLI98_RS12980;Name=NLI98_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12980;old_locus_tag=NLI98_12980 NZ_CP100601.1 Protein Homology CDS 2677095 2677979 . + 0 ID=cds-WP_064278780.1;Parent=gene-NLI98_RS12980;Dbxref=Genbank:WP_064278780.1;Name=WP_064278780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004892103.1;locus_tag=NLI98_RS12980;product=dihydrodipicolinate synthase family protein;protein_id=WP_064278780.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2678065 2679015 . + . ID=gene-NLI98_RS12985;Name=NLI98_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12985;old_locus_tag=NLI98_12985 NZ_CP100601.1 Protein Homology CDS 2678065 2679015 . + 0 ID=cds-WP_025368133.1;Parent=gene-NLI98_RS12985;Dbxref=Genbank:WP_025368133.1;Name=WP_025368133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179770.1;locus_tag=NLI98_RS12985;product=phosphoglycerate dehydrogenase;protein_id=WP_025368133.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2679079 2680398 . + . ID=gene-NLI98_RS12990;Name=NLI98_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12990;old_locus_tag=NLI98_12990 NZ_CP100601.1 Protein Homology CDS 2679079 2680398 . + 0 ID=cds-WP_004179768.1;Parent=gene-NLI98_RS12990;Dbxref=Genbank:WP_004179768.1;Name=WP_004179768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179768.1;locus_tag=NLI98_RS12990;product=MFS transporter;protein_id=WP_004179768.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2680444 2681238 . - . ID=gene-NLI98_RS12995;Name=NLI98_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS12995;old_locus_tag=NLI98_12995 NZ_CP100601.1 Protein Homology CDS 2680444 2681238 . - 0 ID=cds-WP_004179766.1;Parent=gene-NLI98_RS12995;Dbxref=Genbank:WP_004179766.1;Name=WP_004179766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012541776.1;locus_tag=NLI98_RS12995;product=PhzF family phenazine biosynthesis protein;protein_id=WP_004179766.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2681440 2682639 . + . ID=gene-NLI98_RS13000;Name=NLI98_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13000;old_locus_tag=NLI98_13000 NZ_CP100601.1 Protein Homology CDS 2681440 2682639 . + 0 ID=cds-WP_064155884.1;Parent=gene-NLI98_RS13000;Dbxref=Genbank:WP_064155884.1;Name=WP_064155884.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205967.1;locus_tag=NLI98_RS13000;product=sugar transporter;protein_id=WP_064155884.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2682708 2683376 . - . ID=gene-NLI98_RS13005;Name=NLI98_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13005;old_locus_tag=NLI98_13005 NZ_CP100601.1 Protein Homology CDS 2682708 2683376 . - 0 ID=cds-WP_002904403.1;Parent=gene-NLI98_RS13005;Dbxref=Genbank:WP_002904403.1;Name=WP_002904403.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226850.1;locus_tag=NLI98_RS13005;product=MarC family NAAT transporter;protein_id=WP_002904403.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2683420 2683548 . - . ID=gene-NLI98_RS13010;Name=NLI98_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13010;old_locus_tag=NLI98_13010 NZ_CP100601.1 Protein Homology CDS 2683420 2683548 . - 0 ID=cds-WP_004217987.1;Parent=gene-NLI98_RS13010;Dbxref=Genbank:WP_004217987.1;Name=WP_004217987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226849.1;locus_tag=NLI98_RS13010;product=hypothetical protein;protein_id=WP_004217987.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2683638 2684072 . + . ID=gene-NLI98_RS13015;Name=marR;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=NLI98_RS13015;old_locus_tag=NLI98_13015 NZ_CP100601.1 Protein Homology CDS 2683638 2684072 . + 0 ID=cds-WP_004143563.1;Parent=gene-NLI98_RS13015;Dbxref=Genbank:WP_004143563.1;Name=WP_004143563.1;gbkey=CDS;gene=marR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226848.1;locus_tag=NLI98_RS13015;product=multiple antibiotic resistance transcriptional regulator MarR;protein_id=WP_004143563.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2684093 2684467 . + . ID=gene-NLI98_RS13020;Name=marA;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=NLI98_RS13020;old_locus_tag=NLI98_13020 NZ_CP100601.1 Protein Homology CDS 2684093 2684467 . + 0 ID=cds-WP_002904397.1;Parent=gene-NLI98_RS13020;Dbxref=Genbank:WP_002904397.1;Name=WP_002904397.1;gbkey=CDS;gene=marA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226847.1;locus_tag=NLI98_RS13020;product=MDR efflux pump AcrAB transcriptional activator MarA;protein_id=WP_002904397.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2684508 2684726 . + . ID=gene-NLI98_RS13025;Name=marB;gbkey=Gene;gene=marB;gene_biotype=protein_coding;locus_tag=NLI98_RS13025;old_locus_tag=NLI98_13025 NZ_CP100601.1 Protein Homology CDS 2684508 2684726 . + 0 ID=cds-WP_002904394.1;Parent=gene-NLI98_RS13025;Dbxref=Genbank:WP_002904394.1;Name=WP_002904394.1;gbkey=CDS;gene=marB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226846.1;locus_tag=NLI98_RS13025;product=multiple antibiotic resistance protein MarB;protein_id=WP_002904394.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2684775 2685674 . - . ID=gene-NLI98_RS13030;Name=eamA;gbkey=Gene;gene=eamA;gene_biotype=protein_coding;locus_tag=NLI98_RS13030;old_locus_tag=NLI98_13030 NZ_CP100601.1 Protein Homology CDS 2684775 2685674 . - 0 ID=cds-WP_004143566.1;Parent=gene-NLI98_RS13030;Dbxref=Genbank:WP_004143566.1;Name=WP_004143566.1;Ontology_term=GO:0016020;gbkey=CDS;gene=eamA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226845.1;locus_tag=NLI98_RS13030;product=O-acetylserine/cysteine exporter;protein_id=WP_004143566.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2685870 2687066 . + . ID=gene-NLI98_RS13035;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=NLI98_RS13035;old_locus_tag=NLI98_13035 NZ_CP100601.1 Protein Homology CDS 2685870 2687066 . + 0 ID=cds-WP_004176243.1;Parent=gene-NLI98_RS13035;Dbxref=Genbank:WP_004176243.1;Name=WP_004176243.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226844.1;locus_tag=NLI98_RS13035;product=efflux MFS transporter YdeE;protein_id=WP_004176243.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2687196 2687678 . + . ID=gene-NLI98_RS13040;Name=NLI98_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13040;old_locus_tag=NLI98_13040 NZ_CP100601.1 Protein Homology CDS 2687196 2687678 . + 0 ID=cds-WP_002904389.1;Parent=gene-NLI98_RS13040;Dbxref=Genbank:WP_002904389.1;Name=WP_002904389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226843.1;locus_tag=NLI98_RS13040;product=helix-turn-helix domain-containing protein;protein_id=WP_002904389.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2687714 2688412 . - . ID=gene-NLI98_RS13045;Name=urtE;gbkey=Gene;gene=urtE;gene_biotype=protein_coding;locus_tag=NLI98_RS13045;old_locus_tag=NLI98_13045 NZ_CP100601.1 Protein Homology CDS 2687714 2688412 . - 0 ID=cds-WP_004176246.1;Parent=gene-NLI98_RS13045;Dbxref=Genbank:WP_004176246.1;Name=WP_004176246.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtE;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226842.1;locus_tag=NLI98_RS13045;product=urea ABC transporter ATP-binding subunit UrtE;protein_id=WP_004176246.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2688422 2689219 . - . ID=gene-NLI98_RS13050;Name=urtD;gbkey=Gene;gene=urtD;gene_biotype=protein_coding;locus_tag=NLI98_RS13050;old_locus_tag=NLI98_13050 NZ_CP100601.1 Protein Homology CDS 2688422 2689219 . - 0 ID=cds-WP_004892126.1;Parent=gene-NLI98_RS13050;Dbxref=Genbank:WP_004892126.1;Name=WP_004892126.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtD;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226841.1;locus_tag=NLI98_RS13050;product=urea ABC transporter ATP-binding protein UrtD;protein_id=WP_004892126.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2689219 2690292 . - . ID=gene-NLI98_RS13055;Name=urtC;gbkey=Gene;gene=urtC;gene_biotype=protein_coding;locus_tag=NLI98_RS13055;old_locus_tag=NLI98_13055 NZ_CP100601.1 Protein Homology CDS 2689219 2690292 . - 0 ID=cds-WP_017879959.1;Parent=gene-NLI98_RS13055;Dbxref=Genbank:WP_017879959.1;Name=WP_017879959.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226840.1;locus_tag=NLI98_RS13055;product=urea ABC transporter permease subunit UrtC;protein_id=WP_017879959.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2690292 2691866 . - . ID=gene-NLI98_RS13060;Name=urtB;gbkey=Gene;gene=urtB;gene_biotype=protein_coding;locus_tag=NLI98_RS13060;old_locus_tag=NLI98_13060 NZ_CP100601.1 Protein Homology CDS 2690292 2691866 . - 0 ID=cds-WP_088498184.1;Parent=gene-NLI98_RS13060;Dbxref=Genbank:WP_088498184.1;Name=WP_088498184.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226839.1;locus_tag=NLI98_RS13060;product=urea ABC transporter permease subunit UrtB;protein_id=WP_088498184.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2691928 2693199 . - . ID=gene-NLI98_RS13065;Name=urtA;gbkey=Gene;gene=urtA;gene_biotype=protein_coding;locus_tag=NLI98_RS13065;old_locus_tag=NLI98_13065 NZ_CP100601.1 Protein Homology CDS 2691928 2693199 . - 0 ID=cds-WP_004176249.1;Parent=gene-NLI98_RS13065;Dbxref=Genbank:WP_004176249.1;Name=WP_004176249.1;Ontology_term=GO:0015840,GO:0033219,GO:0033221,GO:0030288,GO:0055052;gbkey=CDS;gene=urtA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=urea binding|0033219||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226838.1;locus_tag=NLI98_RS13065;product=urea ABC transporter substrate-binding protein;protein_id=WP_004176249.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2693371 2694474 . - . ID=gene-NLI98_RS13070;Name=NLI98_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13070;old_locus_tag=NLI98_13070 NZ_CP100601.1 Protein Homology CDS 2693371 2694474 . - 0 ID=cds-WP_002904248.1;Parent=gene-NLI98_RS13070;Dbxref=Genbank:WP_002904248.1;Name=WP_002904248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226837.1;locus_tag=NLI98_RS13070;product=cobalamin-independent methionine synthase II family protein;protein_id=WP_002904248.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2694623 2695021 . - . ID=gene-NLI98_RS13075;Name=NLI98_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13075;old_locus_tag=NLI98_13075 NZ_CP100601.1 Protein Homology CDS 2694623 2695021 . - 0 ID=cds-WP_004143576.1;Parent=gene-NLI98_RS13075;Dbxref=Genbank:WP_004143576.1;Name=WP_004143576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226834.1;locus_tag=NLI98_RS13075;product=rhodanese-like domain-containing protein;protein_id=WP_004143576.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2695089 2696186 . + . ID=gene-NLI98_RS13080;Name=ftrA;gbkey=Gene;gene=ftrA;gene_biotype=protein_coding;locus_tag=NLI98_RS13080;old_locus_tag=NLI98_13080 NZ_CP100601.1 Protein Homology CDS 2695089 2696186 . + 0 ID=cds-WP_004892135.1;Parent=gene-NLI98_RS13080;Dbxref=Genbank:WP_004892135.1;Name=WP_004892135.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ftrA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226833.1;locus_tag=NLI98_RS13080;product=transcriptional regulator FtrA;protein_id=WP_004892135.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2696155 2696370 . + . ID=gene-NLI98_RS13085;Name=NLI98_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13085;old_locus_tag=NLI98_13085 NZ_CP100601.1 Protein Homology CDS 2696155 2696370 . + 0 ID=cds-WP_004205985.1;Parent=gene-NLI98_RS13085;Dbxref=Genbank:WP_004205985.1;Name=WP_004205985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226832.1;locus_tag=NLI98_RS13085;product=DUF4177 domain-containing protein;protein_id=WP_004205985.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2696423 2696863 . - . ID=gene-NLI98_RS13090;Name=NLI98_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13090;old_locus_tag=NLI98_13090 NZ_CP100601.1 Protein Homology CDS 2696423 2696863 . - 0 ID=cds-WP_088498185.1;Parent=gene-NLI98_RS13090;Dbxref=Genbank:WP_088498185.1;Name=WP_088498185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226831.1;locus_tag=NLI98_RS13090;product=GNAT family N-acetyltransferase;protein_id=WP_088498185.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2697118 2698182 . - . ID=gene-NLI98_RS13095;Name=NLI98_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13095;old_locus_tag=NLI98_13095 NZ_CP100601.1 Protein Homology CDS 2697118 2698182 . - 0 ID=cds-WP_004892143.1;Parent=gene-NLI98_RS13095;Dbxref=Genbank:WP_004892143.1;Name=WP_004892143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226829.1;locus_tag=NLI98_RS13095;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_004892143.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2698379 2701486 . + . ID=gene-NLI98_RS13100;Name=NLI98_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13100;old_locus_tag=NLI98_13100 NZ_CP100601.1 Protein Homology CDS 2698379 2701486 . + 0 ID=cds-WP_088498186.1;Parent=gene-NLI98_RS13100;Dbxref=Genbank:WP_088498186.1;Name=WP_088498186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020805006.1;locus_tag=NLI98_RS13100;product=beta-galactosidase;protein_id=WP_088498186.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2701541 2702806 . + . ID=gene-NLI98_RS13105;Name=NLI98_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13105;old_locus_tag=NLI98_13105 NZ_CP100601.1 Protein Homology CDS 2701541 2702806 . + 0 ID=cds-WP_004176258.1;Parent=gene-NLI98_RS13105;Dbxref=Genbank:WP_004176258.1;Name=WP_004176258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151612.1;locus_tag=NLI98_RS13105;product=MFS transporter;protein_id=WP_004176258.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2702837 2703925 . - . ID=gene-NLI98_RS13110;Name=NLI98_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13110;old_locus_tag=NLI98_13110 NZ_CP100601.1 Protein Homology CDS 2702837 2703925 . - 0 ID=cds-WP_001620097.1;Parent=gene-NLI98_RS13110;Dbxref=Genbank:WP_001620097.1;Name=WP_001620097.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226824.1;locus_tag=NLI98_RS13110;product=AAA family ATPase;protein_id=WP_001620097.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2704012 2704272 . - . ID=gene-NLI98_RS13115;Name=NLI98_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13115;old_locus_tag=NLI98_13115 NZ_CP100601.1 Protein Homology CDS 2704012 2704272 . - 0 ID=cds-WP_088498187.1;Parent=gene-NLI98_RS13115;Dbxref=Genbank:WP_088498187.1;Name=WP_088498187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002904006.1;locus_tag=NLI98_RS13115;product=hypothetical protein;protein_id=WP_088498187.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2704570 2705430 . + . ID=gene-NLI98_RS13120;Name=NLI98_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13120;old_locus_tag=NLI98_13120 NZ_CP100601.1 Protein Homology CDS 2704570 2705430 . + 0 ID=cds-WP_001620095.1;Parent=gene-NLI98_RS13120;Dbxref=Genbank:WP_001620095.1;Name=WP_001620095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001620095.1;locus_tag=NLI98_RS13120;product=broad-spectrum class A beta-lactamase SHV-1;protein_id=WP_001620095.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2705451 2706212 . - . ID=gene-NLI98_RS13125;Name=NLI98_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13125;old_locus_tag=NLI98_13125 NZ_CP100601.1 Protein Homology CDS 2705451 2706212 . - 0 ID=cds-WP_002210513.1;Parent=gene-NLI98_RS13125;Dbxref=Genbank:WP_002210513.1;Name=WP_002210513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226821.1;locus_tag=NLI98_RS13125;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_002210513.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2706474 2707376 . + . ID=gene-NLI98_RS13130;Name=NLI98_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13130;old_locus_tag=NLI98_13130 NZ_CP100601.1 Protein Homology CDS 2706474 2707376 . + 0 ID=cds-WP_002903955.1;Parent=gene-NLI98_RS13130;Dbxref=Genbank:WP_002903955.1;Name=WP_002903955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226820.1;locus_tag=NLI98_RS13130;product=NAD(P)-dependent oxidoreductase;protein_id=WP_002903955.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2707388 2708653 . + . ID=gene-NLI98_RS13135;Name=NLI98_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13135;old_locus_tag=NLI98_13135 NZ_CP100601.1 Protein Homology CDS 2707388 2708653 . + 0 ID=cds-WP_088498188.1;Parent=gene-NLI98_RS13135;Dbxref=Genbank:WP_088498188.1;Name=WP_088498188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226819.1;locus_tag=NLI98_RS13135;product=four-carbon acid sugar kinase family protein;protein_id=WP_088498188.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2708646 2709266 . + . ID=gene-NLI98_RS13140;Name=NLI98_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13140;old_locus_tag=NLI98_13140 NZ_CP100601.1 Protein Homology CDS 2708646 2709266 . + 0 ID=cds-WP_002210516.1;Parent=gene-NLI98_RS13140;Dbxref=Genbank:WP_002210516.1;Name=WP_002210516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226818.1;locus_tag=NLI98_RS13140;product=aldolase;protein_id=WP_002210516.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2709271 2710053 . + . ID=gene-NLI98_RS13145;Name=NLI98_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13145;old_locus_tag=NLI98_13145 NZ_CP100601.1 Protein Homology CDS 2709271 2710053 . + 0 ID=cds-WP_088498189.1;Parent=gene-NLI98_RS13145;Dbxref=Genbank:WP_088498189.1;Name=WP_088498189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226817.1;locus_tag=NLI98_RS13145;product=HPr family phosphocarrier protein;protein_id=WP_088498189.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2710111 2711475 . + . ID=gene-NLI98_RS13150;Name=NLI98_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13150;old_locus_tag=NLI98_13150 NZ_CP100601.1 Protein Homology CDS 2710111 2711475 . + 0 ID=cds-WP_002903916.1;Parent=gene-NLI98_RS13150;Dbxref=Genbank:WP_002903916.1;Name=WP_002903916.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226816.1;locus_tag=NLI98_RS13150;product=GntP family transporter;protein_id=WP_002903916.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2711502 2712428 . - . ID=gene-NLI98_RS13155;Name=NLI98_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13155;old_locus_tag=NLI98_13155 NZ_CP100601.1 Protein Homology CDS 2711502 2712428 . - 0 ID=cds-WP_025368144.1;Parent=gene-NLI98_RS13155;Dbxref=Genbank:WP_025368144.1;Name=WP_025368144.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226815.1;locus_tag=NLI98_RS13155;product=helix-turn-helix domain-containing protein;protein_id=WP_025368144.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2712739 2713350 . + . ID=gene-NLI98_RS13160;Name=kbvR;gbkey=Gene;gene=kbvR;gene_biotype=protein_coding;locus_tag=NLI98_RS13160;old_locus_tag=NLI98_13160 NZ_CP100601.1 Protein Homology CDS 2712739 2713350 . + 0 ID=cds-WP_002903816.1;Parent=gene-NLI98_RS13160;Dbxref=Genbank:WP_002903816.1;Name=WP_002903816.1;gbkey=CDS;gene=kbvR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226814.1;locus_tag=NLI98_RS13160;product=LuxR family transcriptional regulator KbvR;protein_id=WP_002903816.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2713381 2713500 . - . ID=gene-NLI98_RS13165;Name=NLI98_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13165 NZ_CP100601.1 Protein Homology CDS 2713381 2713500 . - 0 ID=cds-WP_004195995.1;Parent=gene-NLI98_RS13165;Dbxref=Genbank:WP_004195995.1;Name=WP_004195995.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033853.2;locus_tag=NLI98_RS13165;product=small membrane protein;protein_id=WP_004195995.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2713901 2715118 . + . ID=gene-NLI98_RS13170;Name=NLI98_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13170;old_locus_tag=NLI98_13165 NZ_CP100601.1 Protein Homology CDS 2713901 2715118 . + 0 ID=cds-WP_004143607.1;Parent=gene-NLI98_RS13170;Dbxref=Genbank:WP_004143607.1;Name=WP_004143607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226813.1;locus_tag=NLI98_RS13170;product=diguanylate phosphodiesterase;protein_id=WP_004143607.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2715139 2715651 . - . ID=gene-NLI98_RS13175;Name=NLI98_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13175;old_locus_tag=NLI98_13170 NZ_CP100601.1 Protein Homology CDS 2715139 2715651 . - 0 ID=cds-WP_004190248.1;Parent=gene-NLI98_RS13175;Dbxref=Genbank:WP_004190248.1;Name=WP_004190248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226812.1;locus_tag=NLI98_RS13175;product=2-oxo-tetronate isomerase;protein_id=WP_004190248.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2715817 2716290 . - . ID=gene-NLI98_RS13180;Name=NLI98_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13180;old_locus_tag=NLI98_13175 NZ_CP100601.1 Protein Homology CDS 2715817 2716290 . - 0 ID=cds-WP_002903808.1;Parent=gene-NLI98_RS13180;Dbxref=Genbank:WP_002903808.1;Name=WP_002903808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226811.1;locus_tag=NLI98_RS13180;product=Hsp20 family protein;protein_id=WP_002903808.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2716313 2716510 . - . ID=gene-NLI98_RS13185;Name=NLI98_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13185;old_locus_tag=NLI98_13180 NZ_CP100601.1 Protein Homology CDS 2716313 2716510 . - 0 ID=cds-WP_004190251.1;Parent=gene-NLI98_RS13185;Dbxref=Genbank:WP_004190251.1;Name=WP_004190251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020806134.1;locus_tag=NLI98_RS13185;product=hypothetical protein;protein_id=WP_004190251.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2716736 2716837 . - . ID=gene-NLI98_RS13190;Name=NLI98_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13190;old_locus_tag=NLI98_13185 NZ_CP100601.1 Protein Homology CDS 2716736 2716837 . - 0 ID=cds-WP_223174880.1;Parent=gene-NLI98_RS13190;Dbxref=Genbank:WP_223174880.1;Name=WP_223174880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226810.1;locus_tag=NLI98_RS13190;product=hypothetical protein;protein_id=WP_223174880.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2717112 2717234 . + . ID=gene-NLI98_RS13195;Name=NLI98_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13195;old_locus_tag=NLI98_13190 NZ_CP100601.1 Protein Homology CDS 2717112 2717234 . + 0 ID=cds-WP_020325016.1;Parent=gene-NLI98_RS13195;Dbxref=Genbank:WP_020325016.1;Name=WP_020325016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226809.1;locus_tag=NLI98_RS13195;product=hypothetical protein;protein_id=WP_020325016.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2717302 2717937 . + . ID=gene-NLI98_RS13200;Name=NLI98_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13200;old_locus_tag=NLI98_13195 NZ_CP100601.1 Protein Homology CDS 2717302 2717937 . + 0 ID=cds-WP_088498202.1;Parent=gene-NLI98_RS13200;Dbxref=Genbank:WP_088498202.1;Name=WP_088498202.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226808.1;locus_tag=NLI98_RS13200;product=helix-turn-helix transcriptional regulator;protein_id=WP_088498202.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2717934 2718056 . - . ID=gene-NLI98_RS13205;Name=NLI98_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13205;old_locus_tag=NLI98_13200 NZ_CP100601.1 Protein Homology CDS 2717934 2718056 . - 0 ID=cds-WP_004143611.1;Parent=gene-NLI98_RS13205;Dbxref=Genbank:WP_004143611.1;Name=WP_004143611.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033853.2;locus_tag=NLI98_RS13205;product=small membrane protein;protein_id=WP_004143611.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2718111 2718239 . - . ID=gene-NLI98_RS13210;Name=NLI98_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13210;old_locus_tag=NLI98_13205 NZ_CP100601.1 Protein Homology CDS 2718111 2718239 . - 0 ID=cds-WP_004219446.1;Parent=gene-NLI98_RS13210;Dbxref=Genbank:WP_004219446.1;Name=WP_004219446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226806.1;locus_tag=NLI98_RS13210;product=hypothetical protein;protein_id=WP_004219446.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2718411 2719085 . + . ID=gene-NLI98_RS13215;Name=NLI98_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13215;old_locus_tag=NLI98_13210 NZ_CP100601.1 Protein Homology CDS 2718411 2719085 . + 0 ID=cds-WP_023313134.1;Parent=gene-NLI98_RS13215;Dbxref=Genbank:WP_023313134.1;Name=WP_023313134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226805.1;locus_tag=NLI98_RS13215;product=SOS response-associated peptidase;protein_id=WP_023313134.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2719136 2719906 . - . ID=gene-NLI98_RS13220;Name=NLI98_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13220;old_locus_tag=NLI98_13215 NZ_CP100601.1 Protein Homology CDS 2719136 2719906 . - 0 ID=cds-WP_074422810.1;Parent=gene-NLI98_RS13220;Dbxref=Genbank:WP_074422810.1;Name=WP_074422810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015386917.1;locus_tag=NLI98_RS13220;product=helix-turn-helix transcriptional regulator;protein_id=WP_074422810.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2720006 2720392 . + . ID=gene-NLI98_RS13225;Name=NLI98_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13225;old_locus_tag=NLI98_13220 NZ_CP100601.1 Protein Homology CDS 2720006 2720392 . + 0 ID=cds-WP_004179737.1;Parent=gene-NLI98_RS13225;Dbxref=Genbank:WP_004179737.1;Name=WP_004179737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002903735.1;locus_tag=NLI98_RS13225;product=nuclear transport factor 2 family protein;protein_id=WP_004179737.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2720470 2722515 . - . ID=gene-NLI98_RS13230;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=NLI98_RS13230;old_locus_tag=NLI98_13225 NZ_CP100601.1 Protein Homology CDS 2720470 2722515 . - 0 ID=cds-WP_088498190.1;Parent=gene-NLI98_RS13230;Dbxref=Genbank:WP_088498190.1;Name=WP_088498190.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226803.1;locus_tag=NLI98_RS13230;product=peptidyl-dipeptidase Dcp;protein_id=WP_088498190.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2722646 2723395 . + . ID=gene-NLI98_RS13235;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=NLI98_RS13235;old_locus_tag=NLI98_13230 NZ_CP100601.1 Protein Homology CDS 2722646 2723395 . + 0 ID=cds-WP_002903733.1;Parent=gene-NLI98_RS13235;Dbxref=Genbank:WP_002903733.1;Name=WP_002903733.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226802.1;locus_tag=NLI98_RS13235;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_002903733.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2723487 2724173 . + . ID=gene-NLI98_RS13240;Name=NLI98_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13240;old_locus_tag=NLI98_13235 NZ_CP100601.1 Protein Homology CDS 2723487 2724173 . + 0 ID=cds-WP_002903730.1;Parent=gene-NLI98_RS13240;Dbxref=Genbank:WP_002903730.1;Name=WP_002903730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226801.1;locus_tag=NLI98_RS13240;product=GntR family transcriptional regulator;protein_id=WP_002903730.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2724224 2724655 . - . ID=gene-NLI98_RS13245;Name=NLI98_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13245;old_locus_tag=NLI98_13240 NZ_CP100601.1 Protein Homology CDS 2724224 2724655 . - 0 ID=cds-WP_002903728.1;Parent=gene-NLI98_RS13245;Dbxref=Genbank:WP_002903728.1;Name=WP_002903728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226800.1;locus_tag=NLI98_RS13245;product=universal stress protein;protein_id=WP_002903728.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2724921 2726384 . - . ID=gene-NLI98_RS13250;Name=NLI98_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13250;old_locus_tag=NLI98_13245 NZ_CP100601.1 Protein Homology CDS 2724921 2726384 . - 0 ID=cds-WP_004224666.1;Parent=gene-NLI98_RS13250;Dbxref=Genbank:WP_004224666.1;Name=WP_004224666.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226799.1;locus_tag=NLI98_RS13250;product=fructuronate reductase;protein_id=WP_004224666.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2726648 2727931 . - . ID=gene-NLI98_RS13255;Name=NLI98_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13255;old_locus_tag=NLI98_13250 NZ_CP100601.1 Protein Homology CDS 2726648 2727931 . - 0 ID=cds-WP_016946659.1;Parent=gene-NLI98_RS13255;Dbxref=Genbank:WP_016946659.1;Name=WP_016946659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226798.1;locus_tag=NLI98_RS13255;product=MFS transporter;protein_id=WP_016946659.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2728045 2728407 . - . ID=gene-NLI98_RS13260;Name=NLI98_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13260;old_locus_tag=NLI98_13255 NZ_CP100601.1 Protein Homology CDS 2728045 2728407 . - 0 ID=cds-WP_172676884.1;Parent=gene-NLI98_RS13260;Dbxref=Genbank:WP_172676884.1;Name=WP_172676884.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226797.1;locus_tag=NLI98_RS13260;product=YnfA family protein;protein_id=WP_172676884.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2728516 2728857 . + . ID=gene-NLI98_RS13265;Name=NLI98_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13265;old_locus_tag=NLI98_13260 NZ_CP100601.1 Protein Homology CDS 2728516 2728857 . + 0 ID=cds-WP_064145466.1;Parent=gene-NLI98_RS13265;Dbxref=Genbank:WP_064145466.1;Name=WP_064145466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226796.1;locus_tag=NLI98_RS13265;product=DUF1283 family protein;protein_id=WP_064145466.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2728936 2729496 . + . ID=gene-NLI98_RS13270;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=NLI98_RS13270;old_locus_tag=NLI98_13265 NZ_CP100601.1 Protein Homology CDS 2728936 2729496 . + 0 ID=cds-WP_002903719.1;Parent=gene-NLI98_RS13270;Dbxref=Genbank:WP_002903719.1;Name=WP_002903719.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226795.1;locus_tag=NLI98_RS13270;product=spermidine N1-acetyltransferase;protein_id=WP_002903719.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2729490 2730200 . - . ID=gene-NLI98_RS13275;Name=NLI98_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13275;old_locus_tag=NLI98_13270 NZ_CP100601.1 Protein Homology CDS 2729490 2730200 . - 0 ID=cds-WP_023282549.1;Parent=gene-NLI98_RS13275;Dbxref=Genbank:WP_023282549.1;Name=WP_023282549.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226794.1;locus_tag=NLI98_RS13275;product=YnfC family lipoprotein;protein_id=WP_023282549.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2730302 2730571 . + . ID=gene-NLI98_RS13280;Name=NLI98_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13280;old_locus_tag=NLI98_13275 NZ_CP100601.1 Protein Homology CDS 2730302 2730571 . + 0 ID=cds-WP_002903714.1;Parent=gene-NLI98_RS13280;Dbxref=Genbank:WP_002903714.1;Name=WP_002903714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226793.1;locus_tag=NLI98_RS13280;product=DUF1161 domain-containing protein;protein_id=WP_002903714.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2730722 2733157 . + . ID=gene-NLI98_RS13285;Name=NLI98_RS13285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13285;old_locus_tag=NLI98_13280 NZ_CP100601.1 Protein Homology CDS 2730722 2733157 . + 0 ID=cds-WP_023282548.1;Parent=gene-NLI98_RS13285;Dbxref=Genbank:WP_023282548.1;Name=WP_023282548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226792.1;locus_tag=NLI98_RS13285;product=dimethyl sulfoxide reductase subunit A;protein_id=WP_023282548.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2733168 2733785 . + . ID=gene-NLI98_RS13290;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=NLI98_RS13290;old_locus_tag=NLI98_13285 NZ_CP100601.1 Protein Homology CDS 2733168 2733785 . + 0 ID=cds-WP_004152235.1;Parent=gene-NLI98_RS13290;Dbxref=Genbank:WP_004152235.1;Name=WP_004152235.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226791.1;locus_tag=NLI98_RS13290;product=dimethylsulfoxide reductase subunit B;protein_id=WP_004152235.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2733787 2734644 . + . ID=gene-NLI98_RS13295;Name=NLI98_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13295;old_locus_tag=NLI98_13290 NZ_CP100601.1 Protein Homology CDS 2733787 2734644 . + 0 ID=cds-WP_085838289.1;Parent=gene-NLI98_RS13295;Dbxref=Genbank:WP_085838289.1;Name=WP_085838289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009308926.1;locus_tag=NLI98_RS13295;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WP_085838289.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2734686 2735294 . + . ID=gene-NLI98_RS13300;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=NLI98_RS13300;old_locus_tag=NLI98_13295 NZ_CP100601.1 Protein Homology CDS 2734686 2735294 . + 0 ID=cds-WP_085838290.1;Parent=gene-NLI98_RS13300;Dbxref=Genbank:WP_085838290.1;Name=WP_085838290.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226788.1;locus_tag=NLI98_RS13300;product=Tat proofreading chaperone DmsD;protein_id=WP_085838290.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2735428 2736723 . + . ID=gene-NLI98_RS13305;Name=clcB;gbkey=Gene;gene=clcB;gene_biotype=protein_coding;locus_tag=NLI98_RS13305;old_locus_tag=NLI98_13300 NZ_CP100601.1 Protein Homology CDS 2735428 2736723 . + 0 ID=cds-WP_004148305.1;Parent=gene-NLI98_RS13305;Dbxref=Genbank:WP_004148305.1;Name=WP_004148305.1;Ontology_term=GO:0006821,GO:0010447,GO:0005247,GO:0016020;gbkey=CDS;gene=clcB;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,response to acidic pH|0010447||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226787.1;locus_tag=NLI98_RS13305;product=voltage-gated ClC-type chloride channel ClcB;protein_id=WP_004148305.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2736676 2737371 . - . ID=gene-NLI98_RS13310;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=NLI98_RS13310;old_locus_tag=NLI98_13305 NZ_CP100601.1 Protein Homology CDS 2736676 2737371 . - 0 ID=cds-WP_002903703.1;Parent=gene-NLI98_RS13310;Dbxref=Genbank:WP_002903703.1;Name=WP_002903703.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460449.1;locus_tag=NLI98_RS13310;product=dethiobiotin synthase;protein_id=WP_002903703.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2737499 2738719 . - . ID=gene-NLI98_RS13315;Name=NLI98_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13315;old_locus_tag=NLI98_13310 NZ_CP100601.1 Protein Homology CDS 2737499 2738719 . - 0 ID=cds-WP_002903701.1;Parent=gene-NLI98_RS13315;Dbxref=Genbank:WP_002903701.1;Name=WP_002903701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310327.1;locus_tag=NLI98_RS13315;product=ROK family transcriptional regulator;protein_id=WP_002903701.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2738843 2739745 . - . ID=gene-NLI98_RS13320;Name=NLI98_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13320;old_locus_tag=NLI98_13315 NZ_CP100601.1 Protein Homology CDS 2738843 2739745 . - 0 ID=cds-WP_002903700.1;Parent=gene-NLI98_RS13320;Dbxref=Genbank:WP_002903700.1;Name=WP_002903700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226784.1;locus_tag=NLI98_RS13320;product=LysR family transcriptional regulator;protein_id=WP_002903700.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2739876 2741126 . + . ID=gene-NLI98_RS13325;Name=NLI98_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13325;old_locus_tag=NLI98_13320 NZ_CP100601.1 Protein Homology CDS 2739876 2741126 . + 0 ID=cds-WP_002903698.1;Parent=gene-NLI98_RS13325;Dbxref=Genbank:WP_002903698.1;Name=WP_002903698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226783.1;locus_tag=NLI98_RS13325;product=MFS transporter;protein_id=WP_002903698.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2741157 2741249 . - . ID=gene-NLI98_RS13330;Name=NLI98_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13330;old_locus_tag=NLI98_13325 NZ_CP100601.1 Protein Homology CDS 2741157 2741249 . - 0 ID=cds-WP_004206050.1;Parent=gene-NLI98_RS13330;Dbxref=Genbank:WP_004206050.1;Name=WP_004206050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206050.1;locus_tag=NLI98_RS13330;product=hypothetical protein;protein_id=WP_004206050.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2741466 2742953 . + . ID=gene-NLI98_RS13335;Name=NLI98_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13335;old_locus_tag=NLI98_13330 NZ_CP100601.1 Protein Homology CDS 2741466 2742953 . + 0 ID=cds-WP_088498192.1;Parent=gene-NLI98_RS13335;Dbxref=Genbank:WP_088498192.1;Name=WP_088498192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004209775.1;locus_tag=NLI98_RS13335;product=carboxypeptidase M32;protein_id=WP_088498192.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2743118 2743537 . + . ID=gene-NLI98_RS13340;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=NLI98_RS13340;old_locus_tag=NLI98_13335 NZ_CP100601.1 Protein Homology CDS 2743118 2743537 . + 0 ID=cds-WP_002903693.1;Parent=gene-NLI98_RS13340;Dbxref=Genbank:WP_002903693.1;Name=WP_002903693.1;gbkey=CDS;gene=asr;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226780.1;locus_tag=NLI98_RS13340;product=acid resistance repetitive basic protein Asr;protein_id=WP_002903693.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2744476 2745288 . + . ID=gene-NLI98_RS13345;Name=NLI98_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13345;old_locus_tag=NLI98_13340 NZ_CP100601.1 Protein Homology CDS 2744476 2745288 . + 0 ID=cds-WP_002903687.1;Parent=gene-NLI98_RS13345;Dbxref=Genbank:WP_002903687.1;Name=WP_002903687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226777.1;locus_tag=NLI98_RS13345;product=serine protease;protein_id=WP_002903687.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2745302 2745418 . + . ID=gene-NLI98_RS13350;Name=NLI98_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13350;old_locus_tag=NLI98_13345 NZ_CP100601.1 Protein Homology CDS 2745302 2745418 . + 0 ID=cds-WP_004224649.1;Parent=gene-NLI98_RS13350;Dbxref=Genbank:WP_004224649.1;Name=WP_004224649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226776.1;locus_tag=NLI98_RS13350;product=hypothetical protein;protein_id=WP_004224649.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2745462 2745791 . - . ID=gene-NLI98_RS13355;Name=kpnF;gbkey=Gene;gene=kpnF;gene_biotype=protein_coding;locus_tag=NLI98_RS13355;old_locus_tag=NLI98_13350 NZ_CP100601.1 Protein Homology CDS 2745462 2745791 . - 0 ID=cds-WP_002903683.1;Parent=gene-NLI98_RS13355;Dbxref=Genbank:WP_002903683.1;Name=WP_002903683.1;gbkey=CDS;gene=kpnF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226775.1;locus_tag=NLI98_RS13355;product=multidrug efflux SMR transporter subunit KpnF;protein_id=WP_002903683.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2745778 2746140 . - . ID=gene-NLI98_RS13360;Name=kpnE;gbkey=Gene;gene=kpnE;gene_biotype=protein_coding;locus_tag=NLI98_RS13360;old_locus_tag=NLI98_13355 NZ_CP100601.1 Protein Homology CDS 2745778 2746140 . - 0 ID=cds-WP_002903681.1;Parent=gene-NLI98_RS13360;Dbxref=Genbank:WP_002903681.1;Name=WP_002903681.1;gbkey=CDS;gene=kpnE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226774.1;locus_tag=NLI98_RS13360;product=multidrug efflux SMR transporter subunit KpnE;protein_id=WP_002903681.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2746583 2747617 . + . ID=gene-NLI98_RS13365;Name=NLI98_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13365;old_locus_tag=NLI98_13360 NZ_CP100601.1 Protein Homology CDS 2746583 2747617 . + 0 ID=cds-WP_088498193.1;Parent=gene-NLI98_RS13365;Dbxref=Genbank:WP_088498193.1;Name=WP_088498193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460441.1;locus_tag=NLI98_RS13365;product=AI-2E family transporter;protein_id=WP_088498193.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2747842 2749497 . + . ID=gene-NLI98_RS13370;Name=mdcA;gbkey=Gene;gene=mdcA;gene_biotype=protein_coding;locus_tag=NLI98_RS13370;old_locus_tag=NLI98_13365 NZ_CP100601.1 Protein Homology CDS 2747842 2749497 . + 0 ID=cds-WP_004176297.1;Parent=gene-NLI98_RS13370;Dbxref=Genbank:WP_004176297.1;Name=WP_004176297.1;Ontology_term=GO:0006810,GO:0015451;gbkey=CDS;gene=mdcA;go_function=decarboxylation-driven active transmembrane transporter activity|0015451||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226772.1;locus_tag=NLI98_RS13370;product=malonate decarboxylase subunit alpha;protein_id=WP_004176297.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2749497 2750339 . + . ID=gene-NLI98_RS13375;Name=NLI98_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13375;old_locus_tag=NLI98_13370 NZ_CP100601.1 Protein Homology CDS 2749497 2750339 . + 0 ID=cds-WP_004143107.1;Parent=gene-NLI98_RS13375;Dbxref=Genbank:WP_004143107.1;Name=WP_004143107.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226771.1;locus_tag=NLI98_RS13375;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_004143107.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2750357 2750656 . + . ID=gene-NLI98_RS13380;Name=mdcC;gbkey=Gene;gene=mdcC;gene_biotype=protein_coding;locus_tag=NLI98_RS13380;old_locus_tag=NLI98_13375 NZ_CP100601.1 Protein Homology CDS 2750357 2750656 . + 0 ID=cds-WP_004143106.1;Parent=gene-NLI98_RS13380;Dbxref=Genbank:WP_004143106.1;Name=WP_004143106.1;gbkey=CDS;gene=mdcC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226770.1;locus_tag=NLI98_RS13380;product=malonate decarboxylase acyl carrier protein;protein_id=WP_004143106.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2750649 2751482 . + . ID=gene-NLI98_RS13385;Name=NLI98_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13385;old_locus_tag=NLI98_13380 NZ_CP100601.1 Protein Homology CDS 2750649 2751482 . + 0 ID=cds-WP_004143105.1;Parent=gene-NLI98_RS13385;Dbxref=Genbank:WP_004143105.1;Name=WP_004143105.1;Ontology_term=GO:0006633,GO:0044262,GO:0003989,GO:0016831,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,carboxy-lyase activity|0016831||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,cellular carbohydrate metabolic process|0044262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226769.1;locus_tag=NLI98_RS13385;product=biotin-independent malonate decarboxylase subunit beta;protein_id=WP_004143105.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2751482 2752282 . + . ID=gene-NLI98_RS13390;Name=mdcE;gbkey=Gene;gene=mdcE;gene_biotype=protein_coding;locus_tag=NLI98_RS13390;old_locus_tag=NLI98_13385 NZ_CP100601.1 Protein Homology CDS 2751482 2752282 . + 0 ID=cds-WP_004224637.1;Parent=gene-NLI98_RS13390;Dbxref=Genbank:WP_004224637.1;Name=WP_004224637.1;Ontology_term=GO:0044262;gbkey=CDS;gene=mdcE;go_process=cellular carbohydrate metabolic process|0044262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226768.1;locus_tag=NLI98_RS13390;product=biotin-independent malonate decarboxylase subunit gamma;protein_id=WP_004224637.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2752419 2753378 . + . ID=gene-NLI98_RS13395;Name=NLI98_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13395;old_locus_tag=NLI98_13390 NZ_CP100601.1 Protein Homology CDS 2752419 2753378 . + 0 ID=cds-WP_004148291.1;Parent=gene-NLI98_RS13395;Dbxref=Genbank:WP_004148291.1;Name=WP_004148291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226767.1;locus_tag=NLI98_RS13395;product=AEC family transporter;protein_id=WP_004148291.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2753382 2753999 . + . ID=gene-NLI98_RS13400;Name=NLI98_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13400;old_locus_tag=NLI98_13395 NZ_CP100601.1 Protein Homology CDS 2753382 2753999 . + 0 ID=cds-WP_004152239.1;Parent=gene-NLI98_RS13400;Dbxref=Genbank:WP_004152239.1;Name=WP_004152239.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226766.1;locus_tag=NLI98_RS13400;product=malonate decarboxylase holo-ACP synthase;protein_id=WP_004152239.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2753999 2754901 . + . ID=gene-NLI98_RS13405;Name=mdcH;gbkey=Gene;gene=mdcH;gene_biotype=protein_coding;locus_tag=NLI98_RS13405;old_locus_tag=NLI98_13400 NZ_CP100601.1 Protein Homology CDS 2753999 2754901 . + 0 ID=cds-WP_080882532.1;Parent=gene-NLI98_RS13405;Dbxref=Genbank:WP_080882532.1;Name=WP_080882532.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdcH;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226765.1;locus_tag=NLI98_RS13405;product=malonate decarboxylase subunit epsilon;protein_id=WP_080882532.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2754891 2755817 . - . ID=gene-NLI98_RS13410;Name=NLI98_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13410;old_locus_tag=NLI98_13405 NZ_CP100601.1 Protein Homology CDS 2754891 2755817 . - 0 ID=cds-WP_004183915.1;Parent=gene-NLI98_RS13410;Dbxref=Genbank:WP_004183915.1;Name=WP_004183915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226764.1;locus_tag=NLI98_RS13410;product=LysR substrate-binding domain-containing protein;protein_id=WP_004183915.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2755975 2757585 . - . ID=gene-NLI98_RS13415;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=NLI98_RS13415;old_locus_tag=NLI98_13410 NZ_CP100601.1 Protein Homology CDS 2755975 2757585 . - 0 ID=cds-WP_171889666.1;Parent=gene-NLI98_RS13415;Dbxref=Genbank:WP_171889666.1;Name=WP_171889666.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226763.1;locus_tag=NLI98_RS13415;product=malate dehydrogenase (quinone);protein_id=WP_171889666.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2757895 2758815 . - . ID=gene-NLI98_RS13420;Name=NLI98_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13420;old_locus_tag=NLI98_13415 NZ_CP100601.1 Protein Homology CDS 2757895 2758815 . - 0 ID=cds-WP_004183912.1;Parent=gene-NLI98_RS13420;Dbxref=Genbank:WP_004183912.1;Name=WP_004183912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226762.1;locus_tag=NLI98_RS13420;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_004183912.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2758979 2759335 . - . ID=gene-NLI98_RS13425;Name=NLI98_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13425;old_locus_tag=NLI98_13420 NZ_CP100601.1 GeneMarkS-2+ CDS 2758979 2759335 . - 0 ID=cds-WP_088498194.1;Parent=gene-NLI98_RS13425;Dbxref=Genbank:WP_088498194.1;Name=WP_088498194.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS13425;product=hypothetical protein;protein_id=WP_088498194.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2759491 2761107 . + . ID=gene-NLI98_RS13430;Name=NLI98_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13430;old_locus_tag=NLI98_13425 NZ_CP100601.1 Protein Homology CDS 2759491 2761107 . + 0 ID=cds-WP_023301966.1;Parent=gene-NLI98_RS13430;Dbxref=Genbank:WP_023301966.1;Name=WP_023301966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009308938.1;locus_tag=NLI98_RS13430;product=sensor histidine kinase;protein_id=WP_023301966.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2761104 2761823 . + . ID=gene-NLI98_RS13435;Name=dcuR;gbkey=Gene;gene=dcuR;gene_biotype=protein_coding;locus_tag=NLI98_RS13435;old_locus_tag=NLI98_13430 NZ_CP100601.1 Protein Homology CDS 2761104 2761823 . + 0 ID=cds-WP_064167973.1;Parent=gene-NLI98_RS13435;Dbxref=Genbank:WP_064167973.1;Name=WP_064167973.1;Ontology_term=GO:0000160,GO:0003700;gbkey=CDS;gene=dcuR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226759.1;locus_tag=NLI98_RS13435;product=two-component system response regulator DcuR;protein_id=WP_064167973.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2761804 2762754 . - . ID=gene-NLI98_RS13440;Name=NLI98_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13440;old_locus_tag=NLI98_13435 NZ_CP100601.1 Protein Homology CDS 2761804 2762754 . - 0 ID=cds-WP_064167972.1;Parent=gene-NLI98_RS13440;Dbxref=Genbank:WP_064167972.1;Name=WP_064167972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226758.1;locus_tag=NLI98_RS13440;product=FAD:protein FMN transferase;protein_id=WP_064167972.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2762822 2765599 . - . ID=gene-NLI98_RS13445;Name=NLI98_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13445;old_locus_tag=NLI98_13440 NZ_CP100601.1 Protein Homology CDS 2762822 2765599 . - 0 ID=cds-WP_029884317.1;Parent=gene-NLI98_RS13445;Dbxref=Genbank:WP_029884317.1;Name=WP_029884317.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946652.1;locus_tag=NLI98_RS13445;product=flavocytochrome c;protein_id=WP_029884317.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2766240 2767751 . + . ID=gene-NLI98_RS13450;Name=NLI98_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13450;old_locus_tag=NLI98_13445 NZ_CP100601.1 Protein Homology CDS 2766240 2767751 . + 0 ID=cds-WP_004148278.1;Parent=gene-NLI98_RS13450;Dbxref=Genbank:WP_004148278.1;Name=WP_004148278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968326.1;locus_tag=NLI98_RS13450;product=anion permease;protein_id=WP_004148278.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2767806 2769458 . + . ID=gene-NLI98_RS13455;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=NLI98_RS13455;old_locus_tag=NLI98_13450 NZ_CP100601.1 Protein Homology CDS 2767806 2769458 . + 0 ID=cds-WP_004152246.1;Parent=gene-NLI98_RS13455;Dbxref=Genbank:WP_004152246.1;Name=WP_004152246.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226753.1;locus_tag=NLI98_RS13455;product=class I fumarate hydratase FumA;protein_id=WP_004152246.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2769621 2771237 . + . ID=gene-NLI98_RS13460;Name=NLI98_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13460;old_locus_tag=NLI98_13455 NZ_CP100601.1 Protein Homology CDS 2769621 2771237 . + 0 ID=cds-WP_058330713.1;Parent=gene-NLI98_RS13460;Dbxref=Genbank:WP_058330713.1;Name=WP_058330713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226752.1;locus_tag=NLI98_RS13460;product=mechanosensitive ion channel;protein_id=WP_058330713.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2771993 2772382 . - . ID=gene-NLI98_RS13465;Name=pcaC;gbkey=Gene;gene=pcaC;gene_biotype=protein_coding;locus_tag=NLI98_RS13465;old_locus_tag=NLI98_13460 NZ_CP100601.1 Protein Homology CDS 2771993 2772382 . - 0 ID=cds-WP_088498196.1;Parent=gene-NLI98_RS13465;Dbxref=Genbank:WP_088498196.1;Name=WP_088498196.1;Ontology_term=GO:0047575;gbkey=CDS;gene=pcaC;go_function=4-carboxymuconolactone decarboxylase activity|0047575||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226751.1;locus_tag=NLI98_RS13465;product=4-carboxymuconolactone decarboxylase;protein_id=WP_088498196.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2772375 2773139 . - . ID=gene-NLI98_RS13470;Name=pcaD;gbkey=Gene;gene=pcaD;gene_biotype=protein_coding;locus_tag=NLI98_RS13470;old_locus_tag=NLI98_13465 NZ_CP100601.1 Protein Homology CDS 2772375 2773139 . - 0 ID=cds-WP_088498197.1;Parent=gene-NLI98_RS13470;Dbxref=Genbank:WP_088498197.1;Name=WP_088498197.1;Ontology_term=GO:0042952,GO:0047570;gbkey=CDS;gene=pcaD;go_function=3-oxoadipate enol-lactonase activity|0047570||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226750.1;locus_tag=NLI98_RS13470;product=3-oxoadipate enol-lactonase;protein_id=WP_088498197.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2773129 2774481 . - . ID=gene-NLI98_RS13475;Name=NLI98_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13475;old_locus_tag=NLI98_13470 NZ_CP100601.1 Protein Homology CDS 2773129 2774481 . - 0 ID=cds-WP_004148275.1;Parent=gene-NLI98_RS13475;Dbxref=Genbank:WP_004148275.1;Name=WP_004148275.1;Ontology_term=GO:0019619,GO:0047472;gbkey=CDS;go_function=3-carboxy-cis%2Ccis-muconate cycloisomerase activity|0047472||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226749.1;locus_tag=NLI98_RS13475;product=3-carboxy-cis%2Ccis-muconate cycloisomerase;protein_id=WP_004148275.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2774491 2775693 . - . ID=gene-NLI98_RS13480;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=NLI98_RS13480;old_locus_tag=NLI98_13475 NZ_CP100601.1 Protein Homology CDS 2774491 2775693 . - 0 ID=cds-WP_004179693.1;Parent=gene-NLI98_RS13480;Dbxref=Genbank:WP_004179693.1;Name=WP_004179693.1;Ontology_term=GO:0019619,GO:0016747;gbkey=CDS;gene=pcaF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226748.1;locus_tag=NLI98_RS13480;product=3-oxoadipyl-CoA thiolase;protein_id=WP_004179693.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2775703 2776359 . - . ID=gene-NLI98_RS13485;Name=NLI98_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13485;old_locus_tag=NLI98_13480 NZ_CP100601.1 Protein Homology CDS 2775703 2776359 . - 0 ID=cds-WP_004151559.1;Parent=gene-NLI98_RS13485;Dbxref=Genbank:WP_004151559.1;Name=WP_004151559.1;Ontology_term=GO:0008410;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226747.1;locus_tag=NLI98_RS13485;product=3-oxoacid CoA-transferase subunit B;protein_id=WP_004151559.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2776370 2777056 . - . ID=gene-NLI98_RS13490;Name=NLI98_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13490;old_locus_tag=NLI98_13485 NZ_CP100601.1 Protein Homology CDS 2776370 2777056 . - 0 ID=cds-WP_002903522.1;Parent=gene-NLI98_RS13490;Dbxref=Genbank:WP_002903522.1;Name=WP_002903522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226746.1;locus_tag=NLI98_RS13490;product=3-oxoacid CoA-transferase subunit A;protein_id=WP_002903522.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2777226 2778033 . + . ID=gene-NLI98_RS13495;Name=NLI98_RS13495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS13495;old_locus_tag=NLI98_13490;pseudo=true NZ_CP100601.1 Protein Homology CDS 2777226 2778033 . + 0 ID=cds-NLI98_RS13495;Parent=gene-NLI98_RS13495;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226745.1;locus_tag=NLI98_RS13495;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2778030 2778593 . - . ID=gene-NLI98_RS13500;Name=smrA;gbkey=Gene;gene=smrA;gene_biotype=protein_coding;locus_tag=NLI98_RS13500;old_locus_tag=NLI98_13495 NZ_CP100601.1 Protein Homology CDS 2778030 2778593 . - 0 ID=cds-WP_004143055.1;Parent=gene-NLI98_RS13500;Dbxref=Genbank:WP_004143055.1;Name=WP_004143055.1;gbkey=CDS;gene=smrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226744.1;locus_tag=NLI98_RS13500;product=DNA endonuclease SmrA;protein_id=WP_004143055.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2778695 2779603 . - . ID=gene-NLI98_RS13505;Name=NLI98_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13505;old_locus_tag=NLI98_13500 NZ_CP100601.1 Protein Homology CDS 2778695 2779603 . - 0 ID=cds-WP_088498199.1;Parent=gene-NLI98_RS13505;Dbxref=Genbank:WP_088498199.1;Name=WP_088498199.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226743.1;locus_tag=NLI98_RS13505;product=LysR family transcriptional regulator;protein_id=WP_088498199.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2779770 2781080 . + . ID=gene-NLI98_RS13510;Name=NLI98_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13510;old_locus_tag=NLI98_13505 NZ_CP100601.1 Protein Homology CDS 2779770 2781080 . + 0 ID=cds-WP_094645063.1;Parent=gene-NLI98_RS13510;Dbxref=Genbank:WP_094645063.1;Name=WP_094645063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226742.1;locus_tag=NLI98_RS13510;product=M20 family metallo-hydrolase;protein_id=WP_094645063.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2781080 2782525 . + . ID=gene-NLI98_RS13515;Name=NLI98_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13515;old_locus_tag=NLI98_13510 NZ_CP100601.1 Protein Homology CDS 2781080 2782525 . + 0 ID=cds-WP_004190329.1;Parent=gene-NLI98_RS13515;Dbxref=Genbank:WP_004190329.1;Name=WP_004190329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226741.1;locus_tag=NLI98_RS13515;product=M20 family metallopeptidase;protein_id=WP_004190329.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2782645 2784171 . + . ID=gene-NLI98_RS13520;Name=abgT;gbkey=Gene;gene=abgT;gene_biotype=protein_coding;locus_tag=NLI98_RS13520;old_locus_tag=NLI98_13515 NZ_CP100601.1 Protein Homology CDS 2782645 2784171 . + 0 ID=cds-WP_088498074.1;Parent=gene-NLI98_RS13520;Dbxref=Genbank:WP_088498074.1;Name=WP_088498074.1;gbkey=CDS;gene=abgT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226740.1;locus_tag=NLI98_RS13520;product=p-aminobenzoyl-glutamate transporter;protein_id=WP_088498074.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2784204 2784362 . - . ID=gene-NLI98_RS13525;Name=NLI98_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13525;old_locus_tag=NLI98_13520 NZ_CP100601.1 Protein Homology CDS 2784204 2784362 . - 0 ID=cds-WP_002903398.1;Parent=gene-NLI98_RS13525;Dbxref=Genbank:WP_002903398.1;Name=WP_002903398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226739.1;locus_tag=NLI98_RS13525;product=hypothetical protein;protein_id=WP_002903398.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2784655 2785170 . + . ID=gene-NLI98_RS13530;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=NLI98_RS13530;old_locus_tag=NLI98_13525 NZ_CP100601.1 Protein Homology CDS 2784655 2785170 . + 0 ID=cds-WP_004176326.1;Parent=gene-NLI98_RS13530;Dbxref=Genbank:WP_004176326.1;Name=WP_004176326.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;gene=ogt;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226738.1;locus_tag=NLI98_RS13530;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_004176326.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2785366 2786118 . + . ID=gene-NLI98_RS13535;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=NLI98_RS13535;old_locus_tag=NLI98_13530 NZ_CP100601.1 Protein Homology CDS 2785366 2786118 . + 0 ID=cds-WP_002903394.1;Parent=gene-NLI98_RS13535;Dbxref=Genbank:WP_002903394.1;Name=WP_002903394.1;gbkey=CDS;gene=fnr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007849744.1;locus_tag=NLI98_RS13535;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_002903394.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2786257 2787207 . + . ID=gene-NLI98_RS13540;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=NLI98_RS13540;old_locus_tag=NLI98_13535 NZ_CP100601.1 Protein Homology CDS 2786257 2787207 . + 0 ID=cds-WP_002903391.1;Parent=gene-NLI98_RS13540;Dbxref=Genbank:WP_002903391.1;Name=WP_002903391.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226736.1;locus_tag=NLI98_RS13540;product=universal stress protein UspE;protein_id=WP_002903391.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2787317 2787505 . - . ID=gene-NLI98_RS13545;Name=NLI98_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13545;old_locus_tag=NLI98_13540 NZ_CP100601.1 Protein Homology CDS 2787317 2787505 . - 0 ID=cds-WP_004887037.1;Parent=gene-NLI98_RS13545;Dbxref=Genbank:WP_004887037.1;Name=WP_004887037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226735.1;locus_tag=NLI98_RS13545;product=hypothetical protein;protein_id=WP_004887037.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2787654 2789042 . - . ID=gene-NLI98_RS13550;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=NLI98_RS13550;old_locus_tag=NLI98_13545 NZ_CP100601.1 Protein Homology CDS 2787654 2789042 . - 0 ID=cds-WP_002903386.1;Parent=gene-NLI98_RS13550;Dbxref=Genbank:WP_002903386.1;Name=WP_002903386.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014033.1;locus_tag=NLI98_RS13550;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_002903386.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2789053 2790582 . - . ID=gene-NLI98_RS13555;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=NLI98_RS13555;old_locus_tag=NLI98_13550 NZ_CP100601.1 Protein Homology CDS 2789053 2790582 . - 0 ID=cds-WP_004148265.1;Parent=gene-NLI98_RS13555;Dbxref=Genbank:WP_004148265.1;Name=WP_004148265.1;Ontology_term=GO:0008750;gbkey=CDS;gene=pntA;go_function=NAD(P)+ transhydrogenase (AB-specific) activity|0008750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226733.1;locus_tag=NLI98_RS13555;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_004148265.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2790925 2791107 . + . ID=gene-NLI98_RS13560;Name=NLI98_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13560;old_locus_tag=NLI98_13555 NZ_CP100601.1 Protein Homology CDS 2790925 2791107 . + 0 ID=cds-WP_004140012.1;Parent=gene-NLI98_RS13560;Dbxref=Genbank:WP_004140012.1;Name=WP_004140012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226730.1;locus_tag=NLI98_RS13560;product=hypothetical protein;protein_id=WP_004140012.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2791104 2792054 . + . ID=gene-NLI98_RS13565;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=NLI98_RS13565;old_locus_tag=NLI98_13560 NZ_CP100601.1 Protein Homology CDS 2791104 2792054 . + 0 ID=cds-WP_002903384.1;Parent=gene-NLI98_RS13565;Dbxref=Genbank:WP_002903384.1;Name=WP_002903384.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226729.1;locus_tag=NLI98_RS13565;product=DUF1471 family protein YdgH;protein_id=WP_002903384.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2792232 2793614 . + . ID=gene-NLI98_RS13570;Name=NLI98_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13570;old_locus_tag=NLI98_13565 NZ_CP100601.1 Protein Homology CDS 2792232 2793614 . + 0 ID=cds-WP_004183892.1;Parent=gene-NLI98_RS13570;Dbxref=Genbank:WP_004183892.1;Name=WP_004183892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416122.1;locus_tag=NLI98_RS13570;product=amino acid permease;protein_id=WP_004183892.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2793651 2794373 . + . ID=gene-NLI98_RS13575;Name=folM;gbkey=Gene;gene=folM;gene_biotype=protein_coding;locus_tag=NLI98_RS13575;old_locus_tag=NLI98_13570 NZ_CP100601.1 Protein Homology CDS 2793651 2794373 . + 0 ID=cds-WP_004176334.1;Parent=gene-NLI98_RS13575;Dbxref=Genbank:WP_004176334.1;Name=WP_004176334.1;Ontology_term=GO:0016491;gbkey=CDS;gene=folM;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226727.1;locus_tag=NLI98_RS13575;product=dihydromonapterin reductase;protein_id=WP_004176334.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2794370 2794705 . - . ID=gene-NLI98_RS13580;Name=NLI98_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13580;old_locus_tag=NLI98_13575 NZ_CP100601.1 Protein Homology CDS 2794370 2794705 . - 0 ID=cds-WP_002903379.1;Parent=gene-NLI98_RS13580;Dbxref=Genbank:WP_002903379.1;Name=WP_002903379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226726.1;locus_tag=NLI98_RS13580;product=GlpM family protein;protein_id=WP_002903379.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2794834 2795553 . + . ID=gene-NLI98_RS13585;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=NLI98_RS13585;old_locus_tag=NLI98_13580 NZ_CP100601.1 Protein Homology CDS 2794834 2795553 . + 0 ID=cds-WP_002903377.1;Parent=gene-NLI98_RS13585;Dbxref=Genbank:WP_002903377.1;Name=WP_002903377.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=rstA;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226725.1;locus_tag=NLI98_RS13585;product=two-component system response regulator RstA;protein_id=WP_002903377.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2795796 2796158 . + . ID=gene-NLI98_RS13590;Name=NLI98_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13590;old_locus_tag=NLI98_13585 NZ_CP100601.1 Protein Homology CDS 2795796 2796158 . + 0 ID=cds-WP_002903374.1;Parent=gene-NLI98_RS13590;Dbxref=Genbank:WP_002903374.1;Name=WP_002903374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226724.1;locus_tag=NLI98_RS13590;product=hypothetical protein;protein_id=WP_002903374.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2796415 2797716 . + . ID=gene-NLI98_RS13595;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=NLI98_RS13595;old_locus_tag=NLI98_13590 NZ_CP100601.1 Protein Homology CDS 2796415 2797716 . + 0 ID=cds-WP_004151564.1;Parent=gene-NLI98_RS13595;Dbxref=Genbank:WP_004151564.1;Name=WP_004151564.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=rstB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226723.1;locus_tag=NLI98_RS13595;product=two-component system sensor histidine kinase RstB;protein_id=WP_004151564.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2797792 2798724 . + . ID=gene-NLI98_RS13600;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=NLI98_RS13600;old_locus_tag=NLI98_13595 NZ_CP100601.1 Protein Homology CDS 2797792 2798724 . + 0 ID=cds-WP_004148259.1;Parent=gene-NLI98_RS13600;Dbxref=Genbank:WP_004148259.1;Name=WP_004148259.1;Ontology_term=GO:0006274,GO:0003677;gbkey=CDS;gene=tus;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226722.1;locus_tag=NLI98_RS13600;product=DNA replication terminus site-binding protein;protein_id=WP_004148259.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2798714 2800114 . - . ID=gene-NLI98_RS13605;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=NLI98_RS13605;old_locus_tag=NLI98_13600 NZ_CP100601.1 Protein Homology CDS 2798714 2800114 . - 0 ID=cds-WP_002903315.1;Parent=gene-NLI98_RS13605;Dbxref=Genbank:WP_002903315.1;Name=WP_002903315.1;Ontology_term=GO:0006099,GO:0004333;gbkey=CDS;gene=fumC;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226721.1;locus_tag=NLI98_RS13605;product=class II fumarate hydratase;protein_id=WP_002903315.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2800454 2802100 . - . ID=gene-NLI98_RS13610;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=NLI98_RS13610;old_locus_tag=NLI98_13605 NZ_CP100601.1 Protein Homology CDS 2800454 2802100 . - 0 ID=cds-WP_002903313.1;Parent=gene-NLI98_RS13610;Dbxref=Genbank:WP_002903313.1;Name=WP_002903313.1;gbkey=CDS;gene=fumA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226720.1;locus_tag=NLI98_RS13610;product=class I fumarate hydratase FumA;protein_id=WP_002903313.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2802302 2803480 . + . ID=gene-NLI98_RS13615;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=NLI98_RS13615;old_locus_tag=NLI98_13610 NZ_CP100601.1 Protein Homology CDS 2802302 2803480 . + 0 ID=cds-WP_088498075.1;Parent=gene-NLI98_RS13615;Dbxref=Genbank:WP_088498075.1;Name=WP_088498075.1;Ontology_term=GO:0009298,GO:0004476,GO:0008270;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA,zinc ion binding|0008270||IEA;go_process=GDP-mannose biosynthetic process|0009298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226719.1;locus_tag=NLI98_RS13615;product=mannose-6-phosphate isomerase;protein_id=WP_088498075.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2803567 2805144 . + . ID=gene-NLI98_RS13620;Name=NLI98_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13620;old_locus_tag=NLI98_13615 NZ_CP100601.1 Protein Homology CDS 2803567 2805144 . + 0 ID=cds-WP_088498076.1;Parent=gene-NLI98_RS13620;Dbxref=Genbank:WP_088498076.1;Name=WP_088498076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226718.1;locus_tag=NLI98_RS13620;product=YdgA family protein;protein_id=WP_088498076.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2805184 2806212 . - . ID=gene-NLI98_RS13625;Name=NLI98_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13625;old_locus_tag=NLI98_13620 NZ_CP100601.1 Protein Homology CDS 2805184 2806212 . - 0 ID=cds-WP_004148253.1;Parent=gene-NLI98_RS13625;Dbxref=Genbank:WP_004148253.1;Name=WP_004148253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226717.1;locus_tag=NLI98_RS13625;product=Mal regulon transcriptional regulator MalI;protein_id=WP_004148253.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2806385 2807977 . + . ID=gene-NLI98_RS13630;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=NLI98_RS13630;old_locus_tag=NLI98_13625 NZ_CP100601.1 Protein Homology CDS 2806385 2807977 . + 0 ID=cds-WP_004892343.1;Parent=gene-NLI98_RS13630;Dbxref=Genbank:WP_004892343.1;Name=WP_004892343.1;Ontology_term=GO:0005355,GO:0005363;gbkey=CDS;gene=malX;go_function=glucose transmembrane transporter activity|0005355||IEA,maltose transmembrane transporter activity|0005363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226716.1;locus_tag=NLI98_RS13630;product=maltose/glucose-specific PTS transporter subunit IIBC;protein_id=WP_004892343.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2808029 2809201 . + . ID=gene-NLI98_RS13635;Name=NLI98_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13635;old_locus_tag=NLI98_13630 NZ_CP100601.1 Protein Homology CDS 2808029 2809201 . + 0 ID=cds-WP_032423879.1;Parent=gene-NLI98_RS13635;Dbxref=Genbank:WP_032423879.1;Name=WP_032423879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226715.1;locus_tag=NLI98_RS13635;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_032423879.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2809215 2810243 . - . ID=gene-NLI98_RS13640;Name=NLI98_RS13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13640;old_locus_tag=NLI98_13635 NZ_CP100601.1 Protein Homology CDS 2809215 2810243 . - 0 ID=cds-WP_004179669.1;Parent=gene-NLI98_RS13640;Dbxref=Genbank:WP_004179669.1;Name=WP_004179669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226714.1;locus_tag=NLI98_RS13640;product=magnesium transporter CorA;protein_id=WP_004179669.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2810555 2810758 . + . ID=gene-NLI98_RS13645;Name=ydfZ;gbkey=Gene;gene=ydfZ;gene_biotype=protein_coding;locus_tag=NLI98_RS13645;old_locus_tag=NLI98_13640 NZ_CP100601.1 Protein Homology CDS 2810555 2810758 . + 0 ID=cds-WP_004151566.1;Parent=gene-NLI98_RS13645;Dbxref=Genbank:WP_004151566.1;Name=WP_004151566.1;gbkey=CDS;gene=ydfZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226713.1;locus_tag=NLI98_RS13645;product=putative selenium delivery protein YdfZ;protein_id=WP_004151566.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2810828 2811307 . - . ID=gene-NLI98_RS13650;Name=NLI98_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13650;old_locus_tag=NLI98_13645 NZ_CP100601.1 Protein Homology CDS 2810828 2811307 . - 0 ID=cds-WP_004179667.1;Parent=gene-NLI98_RS13650;Dbxref=Genbank:WP_004179667.1;Name=WP_004179667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226712.1;locus_tag=NLI98_RS13650;product=hypothetical protein;protein_id=WP_004179667.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2811544 2811897 . + . ID=gene-NLI98_RS13655;Name=NLI98_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13655;old_locus_tag=NLI98_13650 NZ_CP100601.1 Protein Homology CDS 2811544 2811897 . + 0 ID=cds-WP_004179665.1;Parent=gene-NLI98_RS13655;Dbxref=Genbank:WP_004179665.1;Name=WP_004179665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226711.1;locus_tag=NLI98_RS13655;product=DUF1304 domain-containing protein;protein_id=WP_004179665.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2812001 2813209 . + . ID=gene-NLI98_RS13660;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=NLI98_RS13660;old_locus_tag=NLI98_13655 NZ_CP100601.1 Protein Homology CDS 2812001 2813209 . + 0 ID=cds-WP_015958353.1;Parent=gene-NLI98_RS13660;Dbxref=Genbank:WP_015958353.1;Name=WP_015958353.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226710.1;locus_tag=NLI98_RS13660;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_015958353.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2813206 2813439 . + . ID=gene-NLI98_RS13665;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=NLI98_RS13665;old_locus_tag=NLI98_13660 NZ_CP100601.1 Protein Homology CDS 2813206 2813439 . + 0 ID=cds-WP_020324676.1;Parent=gene-NLI98_RS13665;Dbxref=Genbank:WP_020324676.1;Name=WP_020324676.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226709.1;locus_tag=NLI98_RS13665;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_020324676.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2813690 2814082 . + . ID=gene-NLI98_RS13670;Name=NLI98_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13670;old_locus_tag=NLI98_13665 NZ_CP100601.1 Protein Homology CDS 2813690 2814082 . + 0 ID=cds-WP_002903231.1;Parent=gene-NLI98_RS13670;Dbxref=Genbank:WP_002903231.1;Name=WP_002903231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226708.1;locus_tag=NLI98_RS13670;product=DUF1398 domain-containing protein;protein_id=WP_002903231.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2814117 2814275 . - . ID=gene-NLI98_RS13675;Name=NLI98_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13675;old_locus_tag=NLI98_13670 NZ_CP100601.1 Protein Homology CDS 2814117 2814275 . - 0 ID=cds-WP_002903230.1;Parent=gene-NLI98_RS13675;Dbxref=Genbank:WP_002903230.1;Name=WP_002903230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226707.1;locus_tag=NLI98_RS13675;product=YqaE/Pmp3 family membrane protein;protein_id=WP_002903230.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2814558 2815556 . + . ID=gene-NLI98_RS13680;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=NLI98_RS13680;old_locus_tag=NLI98_13675 NZ_CP100601.1 Protein Homology CDS 2814558 2815556 . + 0 ID=cds-WP_002903227.1;Parent=gene-NLI98_RS13680;Dbxref=Genbank:WP_002903227.1;Name=WP_002903227.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226706.1;locus_tag=NLI98_RS13680;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_002903227.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2815605 2817044 . - . ID=gene-NLI98_RS13685;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=NLI98_RS13685;old_locus_tag=NLI98_13680 NZ_CP100601.1 Protein Homology CDS 2815605 2817044 . - 0 ID=cds-WP_088498077.1;Parent=gene-NLI98_RS13685;Dbxref=Genbank:WP_088498077.1;Name=WP_088498077.1;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310048.1;locus_tag=NLI98_RS13685;product=aldehyde dehydrogenase;protein_id=WP_088498077.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2817043 2817180 . + . ID=gene-NLI98_RS13690;Name=NLI98_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13690;old_locus_tag=NLI98_13685 NZ_CP100601.1 Protein Homology CDS 2817043 2817180 . + 0 ID=cds-WP_004140057.1;Parent=gene-NLI98_RS13690;Dbxref=Genbank:WP_004140057.1;Name=WP_004140057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226703.1;locus_tag=NLI98_RS13690;product=hypothetical protein;protein_id=WP_004140057.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2817242 2818042 . - . ID=gene-NLI98_RS13695;Name=NLI98_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13695;old_locus_tag=NLI98_13690 NZ_CP100601.1 Protein Homology CDS 2817242 2818042 . - 0 ID=cds-WP_004183872.1;Parent=gene-NLI98_RS13695;Dbxref=Genbank:WP_004183872.1;Name=WP_004183872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226702.1;locus_tag=NLI98_RS13695;product=YdcF family protein;protein_id=WP_004183872.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2818423 2819748 . + . ID=gene-NLI98_RS13700;Name=NLI98_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13700;old_locus_tag=NLI98_13695 NZ_CP100601.1 Protein Homology CDS 2818423 2819748 . + 0 ID=cds-WP_004179652.1;Parent=gene-NLI98_RS13700;Dbxref=Genbank:WP_004179652.1;Name=WP_004179652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226701.1;locus_tag=NLI98_RS13700;product=MHS family MFS transporter;protein_id=WP_004179652.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2820098 2821528 . - . ID=gene-NLI98_RS13705;Name=NLI98_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13705;old_locus_tag=NLI98_13700 NZ_CP100601.1 Protein Homology CDS 2820098 2821528 . - 0 ID=cds-WP_002903059.1;Parent=gene-NLI98_RS13705;Dbxref=Genbank:WP_002903059.1;Name=WP_002903059.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226700.1;locus_tag=NLI98_RS13705;product=amino acid permease;protein_id=WP_002903059.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2821538 2822533 . - . ID=gene-NLI98_RS13710;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=NLI98_RS13710;old_locus_tag=NLI98_13705 NZ_CP100601.1 Protein Homology CDS 2821538 2822533 . - 0 ID=cds-WP_004176358.1;Parent=gene-NLI98_RS13710;Dbxref=Genbank:WP_004176358.1;Name=WP_004176358.1;Ontology_term=GO:0006527,GO:0009017;gbkey=CDS;gene=astE;go_function=succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226699.1;locus_tag=NLI98_RS13710;product=succinylglutamate desuccinylase;protein_id=WP_004176358.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2822544 2823884 . - . ID=gene-NLI98_RS13715;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=NLI98_RS13715;old_locus_tag=NLI98_13710 NZ_CP100601.1 Protein Homology CDS 2822544 2823884 . - 0 ID=cds-WP_032414867.1;Parent=gene-NLI98_RS13715;Dbxref=Genbank:WP_032414867.1;Name=WP_032414867.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226698.1;locus_tag=NLI98_RS13715;product=N-succinylarginine dihydrolase;protein_id=WP_032414867.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2823906 2825372 . - . ID=gene-NLI98_RS13720;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=NLI98_RS13720;old_locus_tag=NLI98_13715 NZ_CP100601.1 Protein Homology CDS 2823906 2825372 . - 0 ID=cds-WP_047682107.1;Parent=gene-NLI98_RS13720;Dbxref=Genbank:WP_047682107.1;Name=WP_047682107.1;Ontology_term=GO:0006527,GO:0016620;gbkey=CDS;gene=astD;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226697.1;locus_tag=NLI98_RS13720;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_047682107.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2825363 2826385 . - . ID=gene-NLI98_RS13725;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=NLI98_RS13725;old_locus_tag=NLI98_13720 NZ_CP100601.1 Protein Homology CDS 2825363 2826385 . - 0 ID=cds-WP_172676904.1;Parent=gene-NLI98_RS13725;Dbxref=Genbank:WP_172676904.1;Name=WP_172676904.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226696.1;locus_tag=NLI98_RS13725;product=arginine N-succinyltransferase;protein_id=WP_172676904.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2826404 2827609 . - . ID=gene-NLI98_RS13730;Name=NLI98_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13730;old_locus_tag=NLI98_13725 NZ_CP100601.1 Protein Homology CDS 2826404 2827609 . - 0 ID=cds-WP_004176366.1;Parent=gene-NLI98_RS13730;Dbxref=Genbank:WP_004176366.1;Name=WP_004176366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226695.1;locus_tag=NLI98_RS13730;product=aspartate aminotransferase family protein;protein_id=WP_004176366.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2827779 2827925 . + . ID=gene-NLI98_RS13735;Name=NLI98_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13735;old_locus_tag=NLI98_13730 NZ_CP100601.1 Protein Homology CDS 2827779 2827925 . + 0 ID=cds-WP_004224524.1;Parent=gene-NLI98_RS13735;Dbxref=Genbank:WP_004224524.1;Name=WP_004224524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226694.1;locus_tag=NLI98_RS13735;product=hypothetical protein;protein_id=WP_004224524.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2828138 2829412 . + . ID=gene-NLI98_RS13740;Name=NLI98_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13740;old_locus_tag=NLI98_13735 NZ_CP100601.1 Protein Homology CDS 2828138 2829412 . + 0 ID=cds-WP_004151574.1;Parent=gene-NLI98_RS13740;Dbxref=Genbank:WP_004151574.1;Name=WP_004151574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122303.1;locus_tag=NLI98_RS13740;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WP_004151574.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2829568 2830566 . - . ID=gene-NLI98_RS13745;Name=NLI98_RS13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13745;old_locus_tag=NLI98_13740 NZ_CP100601.1 Protein Homology CDS 2829568 2830566 . - 0 ID=cds-WP_023158685.1;Parent=gene-NLI98_RS13745;Dbxref=Genbank:WP_023158685.1;Name=WP_023158685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226691.1;locus_tag=NLI98_RS13745;product=aldo/keto reductase;protein_id=WP_023158685.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2830667 2831614 . + . ID=gene-NLI98_RS13750;Name=NLI98_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13750;old_locus_tag=NLI98_13745 NZ_CP100601.1 Protein Homology CDS 2830667 2831614 . + 0 ID=cds-WP_009308991.1;Parent=gene-NLI98_RS13750;Dbxref=Genbank:WP_009308991.1;Name=WP_009308991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190376.1;locus_tag=NLI98_RS13750;product=LysR family transcriptional regulator;protein_id=WP_009308991.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2831722 2832153 . + . ID=gene-NLI98_RS13755;Name=NLI98_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13755;old_locus_tag=NLI98_13750 NZ_CP100601.1 Protein Homology CDS 2831722 2832153 . + 0 ID=cds-WP_002902969.1;Parent=gene-NLI98_RS13755;Dbxref=Genbank:WP_002902969.1;Name=WP_002902969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226689.1;locus_tag=NLI98_RS13755;product=MarR family transcriptional regulator;protein_id=WP_002902969.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2832153 2833805 . + . ID=gene-NLI98_RS13760;Name=NLI98_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13760;old_locus_tag=NLI98_13755 NZ_CP100601.1 Protein Homology CDS 2832153 2833805 . + 0 ID=cds-WP_088498079.1;Parent=gene-NLI98_RS13760;Dbxref=Genbank:WP_088498079.1;Name=WP_088498079.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226688.1;locus_tag=NLI98_RS13760;product=MFS transporter;protein_id=WP_088498079.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2833834 2834919 . + . ID=gene-NLI98_RS13765;Name=NLI98_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13765;old_locus_tag=NLI98_13760 NZ_CP100601.1 Protein Homology CDS 2833834 2834919 . + 0 ID=cds-WP_002902965.1;Parent=gene-NLI98_RS13765;Dbxref=Genbank:WP_002902965.1;Name=WP_002902965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226687.1;locus_tag=NLI98_RS13765;product=HlyD family secretion protein;protein_id=WP_002902965.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2834916 2836295 . + . ID=gene-NLI98_RS13770;Name=NLI98_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13770;old_locus_tag=NLI98_13765 NZ_CP100601.1 Protein Homology CDS 2834916 2836295 . + 0 ID=cds-WP_023279991.1;Parent=gene-NLI98_RS13770;Dbxref=Genbank:WP_023279991.1;Name=WP_023279991.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226686.1;locus_tag=NLI98_RS13770;product=efflux transporter outer membrane subunit;protein_id=WP_023279991.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2836296 2836970 . + . ID=gene-NLI98_RS13775;Name=NLI98_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13775;old_locus_tag=NLI98_13770 NZ_CP100601.1 Protein Homology CDS 2836296 2836970 . + 0 ID=cds-WP_020324670.1;Parent=gene-NLI98_RS13775;Dbxref=Genbank:WP_020324670.1;Name=WP_020324670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226685.1;locus_tag=NLI98_RS13775;product=O-methyltransferase;protein_id=WP_020324670.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2837018 2840920 . - . ID=gene-NLI98_RS13780;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=NLI98_RS13780;old_locus_tag=NLI98_13775 NZ_CP100601.1 Protein Homology CDS 2837018 2840920 . - 0 ID=cds-WP_032432657.1;Parent=gene-NLI98_RS13780;Dbxref=Genbank:WP_032432657.1;Name=WP_032432657.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004140095.1;locus_tag=NLI98_RS13780;product=ATP-dependent RNA helicase HrpA;protein_id=WP_032432657.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2841125 2841730 . + . ID=gene-NLI98_RS13785;Name=azoR;gbkey=Gene;gene=azoR;gene_biotype=protein_coding;locus_tag=NLI98_RS13785;old_locus_tag=NLI98_13780 NZ_CP100601.1 Protein Homology CDS 2841125 2841730 . + 0 ID=cds-WP_002902889.1;Parent=gene-NLI98_RS13785;Dbxref=Genbank:WP_002902889.1;Name=WP_002902889.1;gbkey=CDS;gene=azoR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226683.1;locus_tag=NLI98_RS13785;product=FMN-dependent NADH-azoreductase;protein_id=WP_002902889.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2841767 2842177 . - . ID=gene-NLI98_RS13790;Name=NLI98_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13790;old_locus_tag=NLI98_13785 NZ_CP100601.1 Protein Homology CDS 2841767 2842177 . - 0 ID=cds-WP_024940864.1;Parent=gene-NLI98_RS13790;Dbxref=Genbank:WP_024940864.1;Name=WP_024940864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012905883.1;locus_tag=NLI98_RS13790;product=GFA family protein;protein_id=WP_024940864.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2842186 2842782 . - . ID=gene-NLI98_RS13795;Name=paaY;gbkey=Gene;gene=paaY;gene_biotype=protein_coding;locus_tag=NLI98_RS13795;old_locus_tag=NLI98_13790 NZ_CP100601.1 Protein Homology CDS 2842186 2842782 . - 0 ID=cds-WP_002902883.1;Parent=gene-NLI98_RS13795;Dbxref=Genbank:WP_002902883.1;Name=WP_002902883.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaY;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226681.1;locus_tag=NLI98_RS13795;product=phenylacetic acid degradation protein PaaY;protein_id=WP_002902883.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2842792 2843718 . - . ID=gene-NLI98_RS13800;Name=paaX;gbkey=Gene;gene=paaX;gene_biotype=protein_coding;locus_tag=NLI98_RS13800;old_locus_tag=NLI98_13795 NZ_CP100601.1 Protein Homology CDS 2842792 2843718 . - 0 ID=cds-WP_025368177.1;Parent=gene-NLI98_RS13800;Dbxref=Genbank:WP_025368177.1;Name=WP_025368177.1;Ontology_term=GO:0006351;gbkey=CDS;gene=paaX;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226680.1;locus_tag=NLI98_RS13800;product=phenylacetic acid degradation operon negative regulatory protein PaaX;protein_id=WP_025368177.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2843838 2845154 . - . ID=gene-NLI98_RS13805;Name=paaF;gbkey=Gene;gene=paaF;gene_biotype=protein_coding;locus_tag=NLI98_RS13805;old_locus_tag=NLI98_13800 NZ_CP100601.1 Protein Homology CDS 2843838 2845154 . - 0 ID=cds-WP_004148224.1;Parent=gene-NLI98_RS13805;Dbxref=Genbank:WP_004148224.1;Name=WP_004148224.1;Ontology_term=GO:0010124,GO:0047475;gbkey=CDS;gene=paaF;go_function=phenylacetate-CoA ligase activity|0047475||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226679.1;locus_tag=NLI98_RS13805;product=phenylacetate--CoA ligase;protein_id=WP_004148224.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2845181 2846386 . - . ID=gene-NLI98_RS13810;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=NLI98_RS13810;old_locus_tag=NLI98_13805 NZ_CP100601.1 Protein Homology CDS 2845181 2846386 . - 0 ID=cds-WP_004151578.1;Parent=gene-NLI98_RS13810;Dbxref=Genbank:WP_004151578.1;Name=WP_004151578.1;Ontology_term=GO:0019619,GO:0016747;gbkey=CDS;gene=pcaF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226678.1;locus_tag=NLI98_RS13810;product=3-oxoadipyl-CoA thiolase;protein_id=WP_004151578.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2846386 2846808 . - . ID=gene-NLI98_RS13815;Name=paaI;gbkey=Gene;gene=paaI;gene_biotype=protein_coding;locus_tag=NLI98_RS13815;old_locus_tag=NLI98_13810 NZ_CP100601.1 Protein Homology CDS 2846386 2846808 . - 0 ID=cds-WP_002902876.1;Parent=gene-NLI98_RS13815;Dbxref=Genbank:WP_002902876.1;Name=WP_002902876.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226677.1;locus_tag=NLI98_RS13815;product=hydroxyphenylacetyl-CoA thioesterase PaaI;protein_id=WP_002902876.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2846798 2848222 . - . ID=gene-NLI98_RS13820;Name=NLI98_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13820;old_locus_tag=NLI98_13815 NZ_CP100601.1 Protein Homology CDS 2846798 2848222 . - 0 ID=cds-WP_004190390.1;Parent=gene-NLI98_RS13820;Dbxref=Genbank:WP_004190390.1;Name=WP_004190390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226676.1;locus_tag=NLI98_RS13820;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_004190390.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2848223 2849011 . - . ID=gene-NLI98_RS13825;Name=paaG;gbkey=Gene;gene=paaG;gene_biotype=protein_coding;locus_tag=NLI98_RS13825;old_locus_tag=NLI98_13820 NZ_CP100601.1 Protein Homology CDS 2848223 2849011 . - 0 ID=cds-WP_004140117.1;Parent=gene-NLI98_RS13825;Dbxref=Genbank:WP_004140117.1;Name=WP_004140117.1;Ontology_term=GO:0010124,GO:0004300;gbkey=CDS;gene=paaG;go_function=enoyl-CoA hydratase activity|0004300||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226675.1;locus_tag=NLI98_RS13825;product=2-(1%2C2-epoxy-1%2C2-dihydrophenyl)acetyl-CoA isomerase PaaG;protein_id=WP_004140117.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2849014 2849781 . - . ID=gene-NLI98_RS13830;Name=NLI98_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13830;old_locus_tag=NLI98_13825 NZ_CP100601.1 Protein Homology CDS 2849014 2849781 . - 0 ID=cds-WP_088498080.1;Parent=gene-NLI98_RS13830;Dbxref=Genbank:WP_088498080.1;Name=WP_088498080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226674.1;locus_tag=NLI98_RS13830;product=2%2C3-dehydroadipyl-CoA hydratase;protein_id=WP_088498080.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2849778 2850848 . - . ID=gene-NLI98_RS13835;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=protein_coding;locus_tag=NLI98_RS13835;old_locus_tag=NLI98_13830 NZ_CP100601.1 Protein Homology CDS 2849778 2850848 . - 0 ID=cds-WP_008805122.1;Parent=gene-NLI98_RS13835;Dbxref=Genbank:WP_008805122.1;Name=WP_008805122.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaK;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226673.1;locus_tag=NLI98_RS13835;product=phenylacetate-CoA oxygenase/reductase subunit PaaK;protein_id=WP_008805122.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2850856 2851353 . - . ID=gene-NLI98_RS13840;Name=paaJ;gbkey=Gene;gene=paaJ;gene_biotype=protein_coding;locus_tag=NLI98_RS13840;old_locus_tag=NLI98_13835 NZ_CP100601.1 Protein Homology CDS 2850856 2851353 . - 0 ID=cds-WP_032424918.1;Parent=gene-NLI98_RS13840;Dbxref=Genbank:WP_032424918.1;Name=WP_032424918.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaJ;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226672.1;locus_tag=NLI98_RS13840;product=phenylacetate-CoA oxygenase subunit PaaJ;protein_id=WP_032424918.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2851365 2852120 . - . ID=gene-NLI98_RS13845;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;locus_tag=NLI98_RS13845;old_locus_tag=NLI98_13840 NZ_CP100601.1 Protein Homology CDS 2851365 2852120 . - 0 ID=cds-WP_004224493.1;Parent=gene-NLI98_RS13845;Dbxref=Genbank:WP_004224493.1;Name=WP_004224493.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaC;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226671.1;locus_tag=NLI98_RS13845;product=phenylacetate-CoA oxygenase subunit PaaC;protein_id=WP_004224493.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2852128 2852415 . - . ID=gene-NLI98_RS13850;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=protein_coding;locus_tag=NLI98_RS13850;old_locus_tag=NLI98_13845 NZ_CP100601.1 Protein Homology CDS 2852128 2852415 . - 0 ID=cds-WP_004224492.1;Parent=gene-NLI98_RS13850;Dbxref=Genbank:WP_004224492.1;Name=WP_004224492.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaB;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226670.1;locus_tag=NLI98_RS13850;product=1%2C2-phenylacetyl-CoA epoxidase subunit B;protein_id=WP_004224492.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2852427 2853356 . - . ID=gene-NLI98_RS13855;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=protein_coding;locus_tag=NLI98_RS13855;old_locus_tag=NLI98_13850 NZ_CP100601.1 Protein Homology CDS 2852427 2853356 . - 0 ID=cds-WP_004176377.1;Parent=gene-NLI98_RS13855;Dbxref=Genbank:WP_004176377.1;Name=WP_004176377.1;Ontology_term=GO:0010124,GO:0097266;gbkey=CDS;gene=paaA;go_function=phenylacetyl-CoA 1%2C2-epoxidase activity|0097266||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415906.1;locus_tag=NLI98_RS13855;product=1%2C2-phenylacetyl-CoA epoxidase subunit A;protein_id=WP_004176377.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2853643 2855688 . + . ID=gene-NLI98_RS13860;Name=paaZ;gbkey=Gene;gene=paaZ;gene_biotype=protein_coding;locus_tag=NLI98_RS13860;old_locus_tag=NLI98_13855 NZ_CP100601.1 Protein Homology CDS 2853643 2855688 . + 0 ID=cds-WP_088498081.1;Parent=gene-NLI98_RS13860;Dbxref=Genbank:WP_088498081.1;Name=WP_088498081.1;gbkey=CDS;gene=paaZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226668.1;locus_tag=NLI98_RS13860;product=phenylacetic acid degradation bifunctional protein PaaZ;protein_id=WP_088498081.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2856165 2858432 . + . ID=gene-NLI98_RS13865;Name=tynA;gbkey=Gene;gene=tynA;gene_biotype=protein_coding;locus_tag=NLI98_RS13865;old_locus_tag=NLI98_13860 NZ_CP100601.1 Protein Homology CDS 2856165 2858432 . + 0 ID=cds-WP_148621444.1;Parent=gene-NLI98_RS13865;Dbxref=Genbank:WP_148621444.1;Name=WP_148621444.1;Ontology_term=GO:0009308,GO:0005507,GO:0008131,GO:0048038;gbkey=CDS;gene=tynA;go_function=copper ion binding|0005507||IEA,primary amine oxidase activity|0008131||IEA,quinone binding|0048038||IEA;go_process=amine metabolic process|0009308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226667.1;locus_tag=NLI98_RS13865;product=primary-amine oxidase;protein_id=WP_148621444.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2858435 2859418 . - . ID=gene-NLI98_RS13870;Name=NLI98_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13870;old_locus_tag=NLI98_13865 NZ_CP100601.1 Protein Homology CDS 2858435 2859418 . - 0 ID=cds-WP_073557828.1;Parent=gene-NLI98_RS13870;Dbxref=Genbank:WP_073557828.1;Name=WP_073557828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226666.1;locus_tag=NLI98_RS13870;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_073557828.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2859462 2860352 . - . ID=gene-NLI98_RS13875;Name=NLI98_RS13875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS13875;old_locus_tag=NLI98_13870;pseudo=true NZ_CP100601.1 Protein Homology CDS 2859462 2860352 . - 0 ID=cds-NLI98_RS13875;Parent=gene-NLI98_RS13875;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226665.1;locus_tag=NLI98_RS13875;product=oxidoreductase;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2860477 2861976 . - . ID=gene-NLI98_RS13880;Name=NLI98_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13880;old_locus_tag=NLI98_13875 NZ_CP100601.1 Protein Homology CDS 2860477 2861976 . - 0 ID=cds-WP_032438510.1;Parent=gene-NLI98_RS13880;Dbxref=Genbank:WP_032438510.1;Name=WP_032438510.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226664.1;locus_tag=NLI98_RS13880;product=aldehyde dehydrogenase family protein;protein_id=WP_032438510.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2862212 2863114 . + . ID=gene-NLI98_RS13885;Name=feaR;gbkey=Gene;gene=feaR;gene_biotype=protein_coding;locus_tag=NLI98_RS13885;old_locus_tag=NLI98_13880 NZ_CP100601.1 Protein Homology CDS 2862212 2863114 . + 0 ID=cds-WP_016947236.1;Parent=gene-NLI98_RS13885;Dbxref=Genbank:WP_016947236.1;Name=WP_016947236.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=feaR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226663.1;locus_tag=NLI98_RS13885;product=transcriptional regulator FeaR;protein_id=WP_016947236.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2863115 2863438 . - . ID=gene-NLI98_RS13890;Name=NLI98_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13890;old_locus_tag=NLI98_13885 NZ_CP100601.1 Protein Homology CDS 2863115 2863438 . - 0 ID=cds-WP_002902522.1;Parent=gene-NLI98_RS13890;Dbxref=Genbank:WP_002902522.1;Name=WP_002902522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226662.1;locus_tag=NLI98_RS13890;product=YdbL family protein;protein_id=WP_002902522.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2863446 2863631 . - . ID=gene-NLI98_RS13895;Name=NLI98_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13895;old_locus_tag=NLI98_13890 NZ_CP100601.1 Protein Homology CDS 2863446 2863631 . - 0 ID=cds-WP_002902519.1;Parent=gene-NLI98_RS13895;Dbxref=Genbank:WP_002902519.1;Name=WP_002902519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226661.1;locus_tag=NLI98_RS13895;product=YnbE family lipoprotein;protein_id=WP_002902519.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2863628 2866267 . - . ID=gene-NLI98_RS13900;Name=NLI98_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13900;old_locus_tag=NLI98_13895 NZ_CP100601.1 Protein Homology CDS 2863628 2866267 . - 0 ID=cds-WP_088498083.1;Parent=gene-NLI98_RS13900;Dbxref=Genbank:WP_088498083.1;Name=WP_088498083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705264.1;locus_tag=NLI98_RS13900;product=YdbH family protein;protein_id=WP_088498083.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2866474 2866974 . + . ID=gene-NLI98_RS13905;Name=NLI98_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13905;old_locus_tag=NLI98_13900 NZ_CP100601.1 Protein Homology CDS 2866474 2866974 . + 0 ID=cds-WP_002902516.1;Parent=gene-NLI98_RS13905;Dbxref=Genbank:WP_002902516.1;Name=WP_002902516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805142.1;locus_tag=NLI98_RS13905;product=DedA family protein;protein_id=WP_002902516.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2867122 2868111 . + . ID=gene-NLI98_RS13910;Name=NLI98_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13910;old_locus_tag=NLI98_13905 NZ_CP100601.1 Protein Homology CDS 2867122 2868111 . + 0 ID=cds-WP_002902515.1;Parent=gene-NLI98_RS13910;Dbxref=Genbank:WP_002902515.1;Name=WP_002902515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226656.1;locus_tag=NLI98_RS13910;product=2-hydroxyacid dehydrogenase;protein_id=WP_002902515.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2868234 2868674 . + . ID=gene-NLI98_RS13915;Name=hslJ;gbkey=Gene;gene=hslJ;gene_biotype=protein_coding;locus_tag=NLI98_RS13915;old_locus_tag=NLI98_13910 NZ_CP100601.1 Protein Homology CDS 2868234 2868674 . + 0 ID=cds-WP_002902513.1;Parent=gene-NLI98_RS13915;Dbxref=Genbank:WP_002902513.1;Name=WP_002902513.1;gbkey=CDS;gene=hslJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805144.1;locus_tag=NLI98_RS13915;product=heat shock protein HslJ;protein_id=WP_002902513.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2868720 2868983 . - . ID=gene-NLI98_RS13920;Name=NLI98_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13920;old_locus_tag=NLI98_13915 NZ_CP100601.1 Protein Homology CDS 2868720 2868983 . - 0 ID=cds-WP_004140155.1;Parent=gene-NLI98_RS13920;Dbxref=Genbank:WP_004140155.1;Name=WP_004140155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588453.1;locus_tag=NLI98_RS13920;product=DUF333 domain-containing protein;protein_id=WP_004140155.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2869346 2872873 . + . ID=gene-NLI98_RS13925;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=NLI98_RS13925;old_locus_tag=NLI98_13920 NZ_CP100601.1 Protein Homology CDS 2869346 2872873 . + 0 ID=cds-WP_020324683.1;Parent=gene-NLI98_RS13925;Dbxref=Genbank:WP_020324683.1;Name=WP_020324683.1;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226653.1;locus_tag=NLI98_RS13925;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;protein_id=WP_020324683.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2873230 2874354 . + . ID=gene-NLI98_RS13930;Name=ompK37;gbkey=Gene;gene=ompK37;gene_biotype=protein_coding;locus_tag=NLI98_RS13930;old_locus_tag=NLI98_13925 NZ_CP100601.1 Protein Homology CDS 2873230 2874354 . + 0 ID=cds-WP_088498084.1;Parent=gene-NLI98_RS13930;Dbxref=Genbank:WP_088498084.1;Name=WP_088498084.1;gbkey=CDS;gene=ompK37;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226652.1;locus_tag=NLI98_RS13930;product=porin OmpK37;protein_id=WP_088498084.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2874498 2874710 . + . ID=gene-NLI98_RS13935;Name=NLI98_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13935;old_locus_tag=NLI98_13930 NZ_CP100601.1 Protein Homology CDS 2874498 2874710 . + 0 ID=cds-WP_002902432.1;Parent=gene-NLI98_RS13935;Dbxref=Genbank:WP_002902432.1;Name=WP_002902432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226651.1;locus_tag=NLI98_RS13935;product=KTSC domain-containing protein;protein_id=WP_002902432.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2874792 2875226 . + . ID=gene-NLI98_RS13940;Name=uspF;gbkey=Gene;gene=uspF;gene_biotype=protein_coding;locus_tag=NLI98_RS13940;old_locus_tag=NLI98_13935 NZ_CP100601.1 Protein Homology CDS 2874792 2875226 . + 0 ID=cds-WP_004140161.1;Parent=gene-NLI98_RS13940;Dbxref=Genbank:WP_004140161.1;Name=WP_004140161.1;gbkey=CDS;gene=uspF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226650.1;locus_tag=NLI98_RS13940;product=universal stress protein UspF;protein_id=WP_004140161.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2875460 2876395 . + . ID=gene-NLI98_RS13945;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=NLI98_RS13945;old_locus_tag=NLI98_13940 NZ_CP100601.1 Protein Homology CDS 2875460 2876395 . + 0 ID=cds-WP_002902422.1;Parent=gene-NLI98_RS13945;Dbxref=Genbank:WP_002902422.1;Name=WP_002902422.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226649.1;locus_tag=NLI98_RS13945;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_002902422.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2876441 2877814 . - . ID=gene-NLI98_RS13950;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=NLI98_RS13950;old_locus_tag=NLI98_13945 NZ_CP100601.1 Protein Homology CDS 2876441 2877814 . - 0 ID=cds-WP_088498085.1;Parent=gene-NLI98_RS13950;Dbxref=Genbank:WP_088498085.1;Name=WP_088498085.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226648.1;locus_tag=NLI98_RS13950;product=ATP-dependent RNA helicase DbpA;protein_id=WP_088498085.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2878340 2879323 . - . ID=gene-NLI98_RS13955;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=NLI98_RS13955;old_locus_tag=NLI98_13950 NZ_CP100601.1 Protein Homology CDS 2878340 2879323 . - 0 ID=cds-WP_004148192.1;Parent=gene-NLI98_RS13955;Dbxref=Genbank:WP_004148192.1;Name=WP_004148192.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226647.1;locus_tag=NLI98_RS13955;product=zinc transporter ZntB;protein_id=WP_004148192.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2879603 2880346 . + . ID=gene-NLI98_RS13960;Name=NLI98_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13960;old_locus_tag=NLI98_13955 NZ_CP100601.1 Protein Homology CDS 2879603 2880346 . + 0 ID=cds-WP_020316476.1;Parent=gene-NLI98_RS13960;Dbxref=Genbank:WP_020316476.1;Name=WP_020316476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226646.1;locus_tag=NLI98_RS13960;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_020316476.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2880309 2881427 . + . ID=gene-NLI98_RS13965;Name=NLI98_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13965;old_locus_tag=NLI98_13960 NZ_CP100601.1 Protein Homology CDS 2880309 2881427 . + 0 ID=cds-WP_020324627.1;Parent=gene-NLI98_RS13965;Dbxref=Genbank:WP_020324627.1;Name=WP_020324627.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226645.1;locus_tag=NLI98_RS13965;product=oxidoreductase;protein_id=WP_020324627.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2881664 2881858 . + . ID=gene-NLI98_RS13970;Name=NLI98_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13970;old_locus_tag=NLI98_13965 NZ_CP100601.1 Protein Homology CDS 2881664 2881858 . + 0 ID=cds-WP_004176404.1;Parent=gene-NLI98_RS13970;Dbxref=Genbank:WP_004176404.1;Name=WP_004176404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226644.1;locus_tag=NLI98_RS13970;product=hypothetical protein;protein_id=WP_004176404.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2881971 2882717 . - . ID=gene-NLI98_RS13975;Name=NLI98_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13975;old_locus_tag=NLI98_13970 NZ_CP100601.1 Protein Homology CDS 2881971 2882717 . - 0 ID=cds-WP_002902411.1;Parent=gene-NLI98_RS13975;Dbxref=Genbank:WP_002902411.1;Name=WP_002902411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226643.1;locus_tag=NLI98_RS13975;product=hypothetical protein;protein_id=WP_002902411.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2883008 2883676 . - . ID=gene-NLI98_RS13980;Name=NLI98_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13980;old_locus_tag=NLI98_13975 NZ_CP100601.1 Protein Homology CDS 2883008 2883676 . - 0 ID=cds-WP_004892563.1;Parent=gene-NLI98_RS13980;Dbxref=Genbank:WP_004892563.1;Name=WP_004892563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226638.1;locus_tag=NLI98_RS13980;product=ABC transporter permease;protein_id=WP_004892563.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2883669 2884682 . - . ID=gene-NLI98_RS13985;Name=NLI98_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13985;old_locus_tag=NLI98_13980 NZ_CP100601.1 Protein Homology CDS 2883669 2884682 . - 0 ID=cds-WP_020324636.1;Parent=gene-NLI98_RS13985;Dbxref=Genbank:WP_020324636.1;Name=WP_020324636.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226637.1;locus_tag=NLI98_RS13985;product=ATP-binding cassette domain-containing protein;protein_id=WP_020324636.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2884691 2885497 . - . ID=gene-NLI98_RS13990;Name=NLI98_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13990;old_locus_tag=NLI98_13985 NZ_CP100601.1 Protein Homology CDS 2884691 2885497 . - 0 ID=cds-WP_002902393.1;Parent=gene-NLI98_RS13990;Dbxref=Genbank:WP_002902393.1;Name=WP_002902393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226636.1;locus_tag=NLI98_RS13990;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_002902393.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2885718 2886893 . + . ID=gene-NLI98_RS13995;Name=NLI98_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS13995;old_locus_tag=NLI98_13990 NZ_CP100601.1 Protein Homology CDS 2885718 2886893 . + 0 ID=cds-WP_020324673.1;Parent=gene-NLI98_RS13995;Dbxref=Genbank:WP_020324673.1;Name=WP_020324673.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226635.1;locus_tag=NLI98_RS13995;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_020324673.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2886938 2887972 . - . ID=gene-NLI98_RS14000;Name=NLI98_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14000;old_locus_tag=NLI98_13995 NZ_CP100601.1 Protein Homology CDS 2886938 2887972 . - 0 ID=cds-WP_088498086.1;Parent=gene-NLI98_RS14000;Dbxref=Genbank:WP_088498086.1;Name=WP_088498086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226634.1;locus_tag=NLI98_RS14000;product=NADP-dependent oxidoreductase;protein_id=WP_088498086.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2888061 2888609 . + . ID=gene-NLI98_RS14005;Name=NLI98_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14005;old_locus_tag=NLI98_14000 NZ_CP100601.1 Protein Homology CDS 2888061 2888609 . + 0 ID=cds-WP_004179582.1;Parent=gene-NLI98_RS14005;Dbxref=Genbank:WP_004179582.1;Name=WP_004179582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226633.1;locus_tag=NLI98_RS14005;product=TetR/AcrR family transcriptional regulator;protein_id=WP_004179582.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2888666 2889577 . - . ID=gene-NLI98_RS14010;Name=NLI98_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14010;old_locus_tag=NLI98_14005 NZ_CP100601.1 Protein Homology CDS 2888666 2889577 . - 0 ID=cds-WP_020324628.1;Parent=gene-NLI98_RS14010;Dbxref=Genbank:WP_020324628.1;Name=WP_020324628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226632.1;locus_tag=NLI98_RS14010;product=NmrA/HSCARG family protein;protein_id=WP_020324628.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2889570 2890439 . - . ID=gene-NLI98_RS14015;Name=NLI98_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14015;old_locus_tag=NLI98_14010 NZ_CP100601.1 Protein Homology CDS 2889570 2890439 . - 0 ID=cds-WP_020324664.1;Parent=gene-NLI98_RS14015;Dbxref=Genbank:WP_020324664.1;Name=WP_020324664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226631.1;locus_tag=NLI98_RS14015;product=MBL fold metallo-hydrolase;protein_id=WP_020324664.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2890527 2891450 . + . ID=gene-NLI98_RS14020;Name=NLI98_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14020;old_locus_tag=NLI98_14015 NZ_CP100601.1 Protein Homology CDS 2890527 2891450 . + 0 ID=cds-WP_020324633.1;Parent=gene-NLI98_RS14020;Dbxref=Genbank:WP_020324633.1;Name=WP_020324633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324633.1;locus_tag=NLI98_RS14020;product=LysR family transcriptional regulator;protein_id=WP_020324633.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2891470 2892375 . - . ID=gene-NLI98_RS14025;Name=NLI98_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14025;old_locus_tag=NLI98_14020 NZ_CP100601.1 Protein Homology CDS 2891470 2892375 . - 0 ID=cds-WP_029498283.1;Parent=gene-NLI98_RS14025;Dbxref=Genbank:WP_029498283.1;Name=WP_029498283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226628.1;locus_tag=NLI98_RS14025;product=LysR family transcriptional regulator;protein_id=WP_029498283.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2892516 2893445 . + . ID=gene-NLI98_RS14030;Name=NLI98_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14030;old_locus_tag=NLI98_14025 NZ_CP100601.1 Protein Homology CDS 2892516 2893445 . + 0 ID=cds-WP_002902287.1;Parent=gene-NLI98_RS14030;Dbxref=Genbank:WP_002902287.1;Name=WP_002902287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226627.1;locus_tag=NLI98_RS14030;product=aromatic alcohol reductase;protein_id=WP_002902287.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2893471 2893677 . + . ID=gene-NLI98_RS14035;Name=NLI98_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14035;old_locus_tag=NLI98_14030 NZ_CP100601.1 Protein Homology CDS 2893471 2893677 . + 0 ID=cds-WP_004179576.1;Parent=gene-NLI98_RS14035;Dbxref=Genbank:WP_004179576.1;Name=WP_004179576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226626.1;locus_tag=NLI98_RS14035;product=DUF1471 domain-containing protein;protein_id=WP_004179576.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2893728 2894606 . - . ID=gene-NLI98_RS14040;Name=NLI98_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14040;old_locus_tag=NLI98_14035 NZ_CP100601.1 Protein Homology CDS 2893728 2894606 . - 0 ID=cds-WP_004151595.1;Parent=gene-NLI98_RS14040;Dbxref=Genbank:WP_004151595.1;Name=WP_004151595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226625.1;locus_tag=NLI98_RS14040;product=AraC family transcriptional regulator;protein_id=WP_004151595.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2894765 2895520 . + . ID=gene-NLI98_RS14045;Name=NLI98_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14045;old_locus_tag=NLI98_14040 NZ_CP100601.1 Protein Homology CDS 2894765 2895520 . + 0 ID=cds-WP_004151596.1;Parent=gene-NLI98_RS14045;Dbxref=Genbank:WP_004151596.1;Name=WP_004151596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226624.1;locus_tag=NLI98_RS14045;product=SDR family oxidoreductase;protein_id=WP_004151596.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2895525 2896118 . - . ID=gene-NLI98_RS14050;Name=NLI98_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14050;old_locus_tag=NLI98_14045 NZ_CP100601.1 Protein Homology CDS 2895525 2896118 . - 0 ID=cds-WP_032419042.1;Parent=gene-NLI98_RS14050;Dbxref=Genbank:WP_032419042.1;Name=WP_032419042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226623.1;locus_tag=NLI98_RS14050;product=TetR/AcrR family transcriptional regulator;protein_id=WP_032419042.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2896192 2896905 . + . ID=gene-NLI98_RS14055;Name=bdcA;gbkey=Gene;gene=bdcA;gene_biotype=protein_coding;locus_tag=NLI98_RS14055;old_locus_tag=NLI98_14050 NZ_CP100601.1 Protein Homology CDS 2896192 2896905 . + 0 ID=cds-WP_032419043.1;Parent=gene-NLI98_RS14055;Dbxref=Genbank:WP_032419043.1;Name=WP_032419043.1;Ontology_term=GO:0016491;gbkey=CDS;gene=bdcA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226622.1;locus_tag=NLI98_RS14055;product=SDR family oxidoreductase;protein_id=WP_032419043.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2896972 2897466 . - . ID=gene-NLI98_RS14060;Name=NLI98_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14060;old_locus_tag=NLI98_14055 NZ_CP100601.1 Protein Homology CDS 2896972 2897466 . - 0 ID=cds-WP_004212340.1;Parent=gene-NLI98_RS14060;Dbxref=Genbank:WP_004212340.1;Name=WP_004212340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570428.1;locus_tag=NLI98_RS14060;product=hypothetical protein;protein_id=WP_004212340.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2897593 2898135 . - . ID=gene-NLI98_RS14065;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=NLI98_RS14065;old_locus_tag=NLI98_14060 NZ_CP100601.1 Protein Homology CDS 2897593 2898135 . - 0 ID=cds-WP_004176417.1;Parent=gene-NLI98_RS14065;Dbxref=Genbank:WP_004176417.1;Name=WP_004176417.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssJ;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226619.1;locus_tag=NLI98_RS14065;product=type VI secretion system lipoprotein TssJ;protein_id=WP_004176417.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2898113 2899198 . - . ID=gene-NLI98_RS14070;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=NLI98_RS14070;old_locus_tag=NLI98_14065 NZ_CP100601.1 Protein Homology CDS 2898113 2899198 . - 0 ID=cds-WP_004176418.1;Parent=gene-NLI98_RS14070;Dbxref=Genbank:WP_004176418.1;Name=WP_004176418.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226618.1;locus_tag=NLI98_RS14070;product=type VI secretion system baseplate subunit TssG;protein_id=WP_004176418.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2899162 2900916 . - . ID=gene-NLI98_RS14075;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=NLI98_RS14075;old_locus_tag=NLI98_14070 NZ_CP100601.1 Protein Homology CDS 2899162 2900916 . - 0 ID=cds-WP_020324625.1;Parent=gene-NLI98_RS14075;Dbxref=Genbank:WP_020324625.1;Name=WP_020324625.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssF;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226617.1;locus_tag=NLI98_RS14075;product=type VI secretion system baseplate subunit TssF;protein_id=WP_020324625.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2900996 2902588 . - . ID=gene-NLI98_RS14080;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=NLI98_RS14080;old_locus_tag=NLI98_14075 NZ_CP100601.1 Protein Homology CDS 2900996 2902588 . - 0 ID=cds-WP_088498087.1;Parent=gene-NLI98_RS14080;Dbxref=Genbank:WP_088498087.1;Name=WP_088498087.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968400.1;locus_tag=NLI98_RS14080;product=type VI secretion system protein TssA;protein_id=WP_088498087.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2902588 2906091 . - . ID=gene-NLI98_RS14085;Name=NLI98_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14085;old_locus_tag=NLI98_14080 NZ_CP100601.1 Protein Homology CDS 2902588 2906091 . - 0 ID=cds-WP_227602464.1;Parent=gene-NLI98_RS14085;Dbxref=Genbank:WP_227602464.1;Name=WP_227602464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014907716.1;locus_tag=NLI98_RS14085;product=type VI secretion protein VasK;protein_id=WP_227602464.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2906040 2907248 . - . ID=gene-NLI98_RS14090;Name=NLI98_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14090;old_locus_tag=NLI98_14085 NZ_CP100601.1 Protein Homology CDS 2906040 2907248 . - 0 ID=cds-WP_032430730.1;Parent=gene-NLI98_RS14090;Dbxref=Genbank:WP_032430730.1;Name=WP_032430730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020316460.1;locus_tag=NLI98_RS14090;product=hypothetical protein;protein_id=WP_032430730.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2908075 2908329 . - . ID=gene-NLI98_RS14095;Name=NLI98_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14095;old_locus_tag=NLI98_14090 NZ_CP100601.1 GeneMarkS-2+ CDS 2908075 2908329 . - 0 ID=cds-WP_225733967.1;Parent=gene-NLI98_RS14095;Dbxref=Genbank:WP_225733967.1;Name=WP_225733967.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS14095;product=maltose transporter permease;protein_id=WP_225733967.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2908516 2909586 . - . ID=gene-NLI98_RS14100;Name=NLI98_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14100;old_locus_tag=NLI98_14095 NZ_CP100601.1 Protein Homology CDS 2908516 2909586 . - 0 ID=cds-WP_014907718.1;Parent=gene-NLI98_RS14100;Dbxref=Genbank:WP_014907718.1;Name=WP_014907718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014907718.1;locus_tag=NLI98_RS14100;product=TIGR02594 family protein;protein_id=WP_014907718.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2909573 2910685 . - . ID=gene-NLI98_RS14105;Name=NLI98_RS14105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS14105;old_locus_tag=NLI98_14100;pseudo=true NZ_CP100601.1 Protein Homology CDS 2909573 2910685 . - 0 ID=cds-NLI98_RS14105;Parent=gene-NLI98_RS14105;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611839.1;locus_tag=NLI98_RS14105;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2910854 2911375 . - . ID=gene-NLI98_RS14110;Name=NLI98_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14110;old_locus_tag=NLI98_14105 NZ_CP100601.1 Protein Homology CDS 2910854 2911375 . - 0 ID=cds-WP_023157869.1;Parent=gene-NLI98_RS14110;Dbxref=Genbank:WP_023157869.1;Name=WP_023157869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179560.1;locus_tag=NLI98_RS14110;product=hypothetical protein;protein_id=WP_023157869.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2911372 2913294 . - . ID=gene-NLI98_RS14115;Name=NLI98_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14115;old_locus_tag=NLI98_14110 NZ_CP100601.1 Protein Homology CDS 2911372 2913294 . - 0 ID=cds-WP_015874724.1;Parent=gene-NLI98_RS14115;Dbxref=Genbank:WP_015874724.1;Name=WP_015874724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810791.1;locus_tag=NLI98_RS14115;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_015874724.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2913312 2913713 . - . ID=gene-NLI98_RS14120;Name=NLI98_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14120;old_locus_tag=NLI98_14115 NZ_CP100601.1 Protein Homology CDS 2913312 2913713 . - 0 ID=cds-WP_223170026.1;Parent=gene-NLI98_RS14120;Dbxref=Genbank:WP_223170026.1;Name=WP_223170026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192084.1;locus_tag=NLI98_RS14120;product=DUF4431 domain-containing protein;protein_id=WP_223170026.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2913725 2916415 . - . ID=gene-NLI98_RS14125;Name=vgrG;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=NLI98_RS14125;old_locus_tag=NLI98_14120 NZ_CP100601.1 Protein Homology CDS 2913725 2916415 . - 0 ID=cds-WP_172676905.1;Parent=gene-NLI98_RS14125;Dbxref=Genbank:WP_172676905.1;Name=WP_172676905.1;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014907723.1;locus_tag=NLI98_RS14125;product=type VI secretion system tip protein VgrG;protein_id=WP_172676905.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2916417 2919071 . - . ID=gene-NLI98_RS14130;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;locus_tag=NLI98_RS14130;old_locus_tag=NLI98_14125 NZ_CP100601.1 Protein Homology CDS 2916417 2919071 . - 0 ID=cds-WP_015874721.1;Parent=gene-NLI98_RS14130;Dbxref=Genbank:WP_015874721.1;Name=WP_015874721.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226603.1;locus_tag=NLI98_RS14130;product=type VI secretion system ATPase TssH;protein_id=WP_015874721.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2919335 2919826 . - . ID=gene-NLI98_RS14135;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;locus_tag=NLI98_RS14135;old_locus_tag=NLI98_14130 NZ_CP100601.1 Protein Homology CDS 2919335 2919826 . - 0 ID=cds-WP_002902160.1;Parent=gene-NLI98_RS14135;Dbxref=Genbank:WP_002902160.1;Name=WP_002902160.1;gbkey=CDS;gene=hcp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226602.1;locus_tag=NLI98_RS14135;product=type VI secretion system effector Hcp;protein_id=WP_002902160.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2919831 2921537 . - . ID=gene-NLI98_RS14140;Name=NLI98_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14140;old_locus_tag=NLI98_14135 NZ_CP100601.1 Protein Homology CDS 2919831 2921537 . - 0 ID=cds-WP_064156461.1;Parent=gene-NLI98_RS14140;Dbxref=Genbank:WP_064156461.1;Name=WP_064156461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226601.1;locus_tag=NLI98_RS14140;product=OmpA family protein;protein_id=WP_064156461.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2921534 2922223 . - . ID=gene-NLI98_RS14145;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=NLI98_RS14145;old_locus_tag=NLI98_14140 NZ_CP100601.1 Protein Homology CDS 2921534 2922223 . - 0 ID=cds-WP_088498289.1;Parent=gene-NLI98_RS14145;Dbxref=Genbank:WP_088498289.1;Name=WP_088498289.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226600.1;locus_tag=NLI98_RS14145;product=type VI secretion system protein TssL%2C short form;protein_id=WP_088498289.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2922220 2923563 . - . ID=gene-NLI98_RS14150;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=NLI98_RS14150;old_locus_tag=NLI98_14145 NZ_CP100601.1 Protein Homology CDS 2922220 2923563 . - 0 ID=cds-WP_172676887.1;Parent=gene-NLI98_RS14150;Dbxref=Genbank:WP_172676887.1;Name=WP_172676887.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssK;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226599.1;locus_tag=NLI98_RS14150;product=type VI secretion system baseplate subunit TssK;protein_id=WP_172676887.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2923573 2925117 . - . ID=gene-NLI98_RS14155;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=NLI98_RS14155;old_locus_tag=NLI98_14150 NZ_CP100601.1 Protein Homology CDS 2923573 2925117 . - 0 ID=cds-WP_004892641.1;Parent=gene-NLI98_RS14155;Dbxref=Genbank:WP_004892641.1;Name=WP_004892641.1;Ontology_term=GO:0033103,GO:0003674,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226598.1;locus_tag=NLI98_RS14155;product=type VI secretion system contractile sheath large subunit;protein_id=WP_004892641.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2925160 2925651 . - . ID=gene-NLI98_RS14160;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=NLI98_RS14160;old_locus_tag=NLI98_14155 NZ_CP100601.1 Protein Homology CDS 2925160 2925651 . - 0 ID=cds-WP_004176434.1;Parent=gene-NLI98_RS14160;Dbxref=Genbank:WP_004176434.1;Name=WP_004176434.1;Ontology_term=GO:0033103,GO:0003674;gbkey=CDS;gene=tssB;go_function=molecular_function|0003674||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226597.1;locus_tag=NLI98_RS14160;product=type VI secretion system contractile sheath small subunit;protein_id=WP_004176434.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2926497 2926745 . + . ID=gene-NLI98_RS14165;Name=NLI98_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14165;old_locus_tag=NLI98_14160 NZ_CP100601.1 Protein Homology CDS 2926497 2926745 . + 0 ID=cds-WP_159195364.1;Parent=gene-NLI98_RS14165;Dbxref=Genbank:WP_159195364.1;Name=WP_159195364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705237.1;locus_tag=NLI98_RS14165;product=DinI-like family protein;protein_id=WP_159195364.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2927154 2927576 . - . ID=gene-NLI98_RS14170;Name=NLI98_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14170;old_locus_tag=NLI98_14165 NZ_CP100601.1 Protein Homology CDS 2927154 2927576 . - 0 ID=cds-WP_004892499.1;Parent=gene-NLI98_RS14170;Dbxref=Genbank:WP_004892499.1;Name=WP_004892499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805245.1;locus_tag=NLI98_RS14170;product=hypothetical protein;protein_id=WP_004892499.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2927627 2928226 . - . ID=gene-NLI98_RS14175;Name=NLI98_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14175;old_locus_tag=NLI98_14170 NZ_CP100601.1 Protein Homology CDS 2927627 2928226 . - 0 ID=cds-WP_064156464.1;Parent=gene-NLI98_RS14175;Dbxref=Genbank:WP_064156464.1;Name=WP_064156464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015370244.1;locus_tag=NLI98_RS14175;product=recombinase family protein;protein_id=WP_064156464.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2928333 2928806 . + . ID=gene-NLI98_RS14180;Name=NLI98_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14180;old_locus_tag=NLI98_14175 NZ_CP100601.1 Protein Homology CDS 2928333 2928806 . + 0 ID=cds-WP_048984367.1;Parent=gene-NLI98_RS14180;Dbxref=Genbank:WP_048984367.1;Name=WP_048984367.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024863.2;locus_tag=NLI98_RS14180;product=GDSL-type esterase/lipase family protein;protein_id=WP_048984367.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2928916 2930010 . - . ID=gene-NLI98_RS14185;Name=NLI98_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14185;old_locus_tag=NLI98_14180 NZ_CP100601.1 Protein Homology CDS 2928916 2930010 . - 0 ID=cds-WP_088498288.1;Parent=gene-NLI98_RS14185;Dbxref=Genbank:WP_088498288.1;Name=WP_088498288.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024863.2;locus_tag=NLI98_RS14185;product=SGNH/GDSL hydrolase family protein;protein_id=WP_088498288.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2930096 2933077 . - . ID=gene-NLI98_RS14190;Name=NLI98_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14190;old_locus_tag=NLI98_14185 NZ_CP100601.1 Protein Homology CDS 2930096 2933077 . - 0 ID=cds-WP_159195363.1;Parent=gene-NLI98_RS14190;Dbxref=Genbank:WP_159195363.1;Name=WP_159195363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001324512.1;locus_tag=NLI98_RS14190;product=SGNH/GDSL hydrolase family protein;protein_id=WP_159195363.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2933155 2936223 . - . ID=gene-NLI98_RS14195;Name=NLI98_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14195;old_locus_tag=NLI98_14190 NZ_CP100601.1 Protein Homology CDS 2933155 2936223 . - 0 ID=cds-WP_159195362.1;Parent=gene-NLI98_RS14195;Dbxref=Genbank:WP_159195362.1;Name=WP_159195362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146182.1;locus_tag=NLI98_RS14195;product=host specificity factor TipJ family phage tail protein;protein_id=WP_159195362.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2936220 2936600 . - . ID=gene-NLI98_RS14200;Name=NLI98_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14200;old_locus_tag=NLI98_14195 NZ_CP100601.1 Protein Homology CDS 2936220 2936600 . - 0 ID=cds-WP_032438539.1;Parent=gene-NLI98_RS14200;Dbxref=Genbank:WP_032438539.1;Name=WP_032438539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160832.1;locus_tag=NLI98_RS14200;product=hypothetical protein;protein_id=WP_032438539.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2936610 2937092 . - . ID=gene-NLI98_RS14205;Name=NLI98_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14205;old_locus_tag=NLI98_14200 NZ_CP100601.1 Protein Homology CDS 2936610 2937092 . - 0 ID=cds-WP_087652717.1;Parent=gene-NLI98_RS14205;Dbxref=Genbank:WP_087652717.1;Name=WP_087652717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152650.1;locus_tag=NLI98_RS14205;product=DUF1833 family protein;protein_id=WP_087652717.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2937273 2937737 . - . ID=gene-NLI98_RS14210;Name=NLI98_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14210;old_locus_tag=NLI98_14205 NZ_CP100601.1 Protein Homology CDS 2937273 2937737 . - 0 ID=cds-WP_004190622.1;Parent=gene-NLI98_RS14210;Dbxref=Genbank:WP_004190622.1;Name=WP_004190622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152649.1;locus_tag=NLI98_RS14210;product=hypothetical protein;protein_id=WP_004190622.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2937737 2941339 . - . ID=gene-NLI98_RS14215;Name=NLI98_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14215;old_locus_tag=NLI98_14210 NZ_CP100601.1 Protein Homology CDS 2937737 2941339 . - 0 ID=cds-WP_102024233.1;Parent=gene-NLI98_RS14215;Dbxref=Genbank:WP_102024233.1;Name=WP_102024233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146186.1;locus_tag=NLI98_RS14215;product=phage tail length tape measure family protein;protein_id=WP_102024233.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2941451 2941972 . - . ID=gene-NLI98_RS14220;Name=NLI98_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14220;old_locus_tag=NLI98_14215 NZ_CP100601.1 GeneMarkS-2+ CDS 2941451 2941972 . - 0 ID=cds-WP_125255118.1;Parent=gene-NLI98_RS14220;Dbxref=Genbank:WP_125255118.1;Name=WP_125255118.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS14220;product=hypothetical protein;protein_id=WP_125255118.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2942021 2942377 . - . ID=gene-NLI98_RS14225;Name=NLI98_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14225;old_locus_tag=NLI98_14220 NZ_CP100601.1 Protein Homology CDS 2942021 2942377 . - 0 ID=cds-WP_004217333.1;Parent=gene-NLI98_RS14225;Dbxref=Genbank:WP_004217333.1;Name=WP_004217333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004217333.1;locus_tag=NLI98_RS14225;product=hypothetical protein;protein_id=WP_004217333.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2942454 2942630 . - . ID=gene-NLI98_RS14230;Name=NLI98_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14230;old_locus_tag=NLI98_14225 NZ_CP100601.1 Protein Homology CDS 2942454 2942630 . - 0 ID=cds-WP_100117007.1;Parent=gene-NLI98_RS14230;Dbxref=Genbank:WP_100117007.1;Name=WP_100117007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831940.1;locus_tag=NLI98_RS14230;product=hypothetical protein;protein_id=WP_100117007.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2942798 2943280 . - . ID=gene-NLI98_RS14235;Name=NLI98_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14235;old_locus_tag=NLI98_14230 NZ_CP100601.1 Protein Homology CDS 2942798 2943280 . - 0 ID=cds-WP_023341360.1;Parent=gene-NLI98_RS14235;Dbxref=Genbank:WP_023341360.1;Name=WP_023341360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190637.1;locus_tag=NLI98_RS14235;product=hypothetical protein;protein_id=WP_023341360.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2943335 2944507 . - . ID=gene-NLI98_RS14240;Name=NLI98_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14240;old_locus_tag=NLI98_14235 NZ_CP100601.1 Protein Homology CDS 2943335 2944507 . - 0 ID=cds-WP_100117009.1;Parent=gene-NLI98_RS14240;Dbxref=Genbank:WP_100117009.1;Name=WP_100117009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004217341.1;locus_tag=NLI98_RS14240;product=phage tail tube protein;protein_id=WP_100117009.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2944531 2944923 . - . ID=gene-NLI98_RS14245;Name=NLI98_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14245;old_locus_tag=NLI98_14240 NZ_CP100601.1 Protein Homology CDS 2944531 2944923 . - 0 ID=cds-WP_004190640.1;Parent=gene-NLI98_RS14245;Dbxref=Genbank:WP_004190640.1;Name=WP_004190640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121013.1;locus_tag=NLI98_RS14245;product=phage tail terminator-like protein;protein_id=WP_004190640.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2944920 2945471 . - . ID=gene-NLI98_RS14250;Name=NLI98_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14250;old_locus_tag=NLI98_14245 NZ_CP100601.1 Protein Homology CDS 2944920 2945471 . - 0 ID=cds-WP_102024234.1;Parent=gene-NLI98_RS14250;Dbxref=Genbank:WP_102024234.1;Name=WP_102024234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807839.1;locus_tag=NLI98_RS14250;product=hypothetical protein;protein_id=WP_102024234.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2945473 2945856 . - . ID=gene-NLI98_RS14255;Name=NLI98_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14255;old_locus_tag=NLI98_14250 NZ_CP100601.1 Protein Homology CDS 2945473 2945856 . - 0 ID=cds-WP_004217344.1;Parent=gene-NLI98_RS14255;Dbxref=Genbank:WP_004217344.1;Name=WP_004217344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160822.1;locus_tag=NLI98_RS14255;product=hypothetical protein;protein_id=WP_004217344.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2946086 2946340 . - . ID=gene-NLI98_RS14260;Name=NLI98_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14260;old_locus_tag=NLI98_14255 NZ_CP100601.1 Protein Homology CDS 2946086 2946340 . - 0 ID=cds-WP_023286293.1;Parent=gene-NLI98_RS14260;Dbxref=Genbank:WP_023286293.1;Name=WP_023286293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190649.1;locus_tag=NLI98_RS14260;product=hypothetical protein;protein_id=WP_023286293.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2946342 2946737 . - . ID=gene-NLI98_RS14265;Name=NLI98_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14265;old_locus_tag=NLI98_14260 NZ_CP100601.1 Protein Homology CDS 2946342 2946737 . - 0 ID=cds-WP_102024235.1;Parent=gene-NLI98_RS14265;Dbxref=Genbank:WP_102024235.1;Name=WP_102024235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831939.1;locus_tag=NLI98_RS14265;product=protein singed;protein_id=WP_102024235.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2947059 2948012 . - . ID=gene-NLI98_RS14270;Name=NLI98_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14270;old_locus_tag=NLI98_14265 NZ_CP100601.1 Protein Homology CDS 2947059 2948012 . - 0 ID=cds-WP_073557854.1;Parent=gene-NLI98_RS14270;Dbxref=Genbank:WP_073557854.1;Name=WP_073557854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004216824.1;locus_tag=NLI98_RS14270;product=Ig domain-containing protein;protein_id=WP_073557854.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2948023 2948808 . - . ID=gene-NLI98_RS14275;Name=NLI98_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14275;old_locus_tag=NLI98_14270 NZ_CP100601.1 Protein Homology CDS 2948023 2948808 . - 0 ID=cds-WP_102024236.1;Parent=gene-NLI98_RS14275;Dbxref=Genbank:WP_102024236.1;Name=WP_102024236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190654.1;locus_tag=NLI98_RS14275;product=hypothetical protein;protein_id=WP_102024236.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2948922 2949098 . - . ID=gene-NLI98_RS14280;Name=NLI98_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14280;old_locus_tag=NLI98_14275 NZ_CP100601.1 Protein Homology CDS 2948922 2949098 . - 0 ID=cds-WP_172676888.1;Parent=gene-NLI98_RS14280;Dbxref=Genbank:WP_172676888.1;Name=WP_172676888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004227000.1;locus_tag=NLI98_RS14280;product=hypothetical protein;protein_id=WP_172676888.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2949339 2950451 . - . ID=gene-NLI98_RS14285;Name=NLI98_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14285;old_locus_tag=NLI98_14280 NZ_CP100601.1 Protein Homology CDS 2949339 2950451 . - 0 ID=cds-WP_073557855.1;Parent=gene-NLI98_RS14285;Dbxref=Genbank:WP_073557855.1;Name=WP_073557855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001645719.1;locus_tag=NLI98_RS14285;product=phage minor head protein;protein_id=WP_073557855.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2950435 2951835 . - . ID=gene-NLI98_RS14290;Name=NLI98_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14290;old_locus_tag=NLI98_14285 NZ_CP100601.1 Protein Homology CDS 2950435 2951835 . - 0 ID=cds-WP_102030380.1;Parent=gene-NLI98_RS14290;Dbxref=Genbank:WP_102030380.1;Name=WP_102030380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807834.1;locus_tag=NLI98_RS14290;product=DUF4055 domain-containing protein;protein_id=WP_102030380.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2951835 2953142 . - . ID=gene-NLI98_RS14295;Name=NLI98_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14295;old_locus_tag=NLI98_14290 NZ_CP100601.1 Protein Homology CDS 2951835 2953142 . - 0 ID=cds-WP_102024250.1;Parent=gene-NLI98_RS14295;Dbxref=Genbank:WP_102024250.1;Name=WP_102024250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190663.1;locus_tag=NLI98_RS14295;product=terminase family protein;protein_id=WP_102024250.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2953120 2954124 . - . ID=gene-NLI98_RS14300;Name=NLI98_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14300;old_locus_tag=NLI98_14295 NZ_CP100601.1 Protein Homology CDS 2953120 2954124 . - 0 ID=cds-WP_032438547.1;Parent=gene-NLI98_RS14300;Dbxref=Genbank:WP_032438547.1;Name=WP_032438547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831936.1;locus_tag=NLI98_RS14300;product=terminase small subunit;protein_id=WP_032438547.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2954673 2954855 . - . ID=gene-NLI98_RS14305;Name=NLI98_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14305;old_locus_tag=NLI98_14300 NZ_CP100601.1 Protein Homology CDS 2954673 2954855 . - 0 ID=cds-WP_040244170.1;Parent=gene-NLI98_RS14305;Dbxref=Genbank:WP_040244170.1;Name=WP_040244170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244013.1;locus_tag=NLI98_RS14305;product=hypothetical protein;protein_id=WP_040244170.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2954987 2955232 . - . ID=gene-NLI98_RS14310;Name=NLI98_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14310;old_locus_tag=NLI98_14305 NZ_CP100601.1 Protein Homology CDS 2954987 2955232 . - 0 ID=cds-WP_004218558.1;Parent=gene-NLI98_RS14310;Dbxref=Genbank:WP_004218558.1;Name=WP_004218558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104246.1;locus_tag=NLI98_RS14310;product=DUF2560 family protein;protein_id=WP_004218558.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2956044 2956238 . - . ID=gene-NLI98_RS14315;Name=NLI98_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14315;old_locus_tag=NLI98_14310 NZ_CP100601.1 Protein Homology CDS 2956044 2956238 . - 0 ID=cds-WP_019405025.1;Parent=gene-NLI98_RS14315;Dbxref=Genbank:WP_019405025.1;Name=WP_019405025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704205.1;locus_tag=NLI98_RS14315;product=hypothetical protein;protein_id=WP_019405025.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2956189 2956464 . - . ID=gene-NLI98_RS14320;Name=NLI98_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14320;old_locus_tag=NLI98_14315 NZ_CP100601.1 Protein Homology CDS 2956189 2956464 . - 0 ID=cds-WP_004190672.1;Parent=gene-NLI98_RS14320;Dbxref=Genbank:WP_004190672.1;Name=WP_004190672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004864254.1;locus_tag=NLI98_RS14320;product=hypothetical protein;protein_id=WP_004190672.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2956461 2956805 . - . ID=gene-NLI98_RS14325;Name=NLI98_RS14325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14325;old_locus_tag=NLI98_14320 NZ_CP100601.1 Protein Homology CDS 2956461 2956805 . - 0 ID=cds-WP_004190674.1;Parent=gene-NLI98_RS14325;Dbxref=Genbank:WP_004190674.1;Name=WP_004190674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184485.1;locus_tag=NLI98_RS14325;product=hypothetical protein;protein_id=WP_004190674.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2956802 2957341 . - . ID=gene-NLI98_RS14330;Name=NLI98_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14330;old_locus_tag=NLI98_14325 NZ_CP100601.1 Protein Homology CDS 2956802 2957341 . - 0 ID=cds-WP_004184488.1;Parent=gene-NLI98_RS14330;Dbxref=Genbank:WP_004184488.1;Name=WP_004184488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838132.1;locus_tag=NLI98_RS14330;product=glycoside hydrolase family 108 protein;protein_id=WP_004184488.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2957338 2957637 . - . ID=gene-NLI98_RS14335;Name=NLI98_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14335;old_locus_tag=NLI98_14330 NZ_CP100601.1 Protein Homology CDS 2957338 2957637 . - 0 ID=cds-WP_031281240.1;Parent=gene-NLI98_RS14335;Dbxref=Genbank:WP_031281240.1;Name=WP_031281240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136187.1;locus_tag=NLI98_RS14335;product=phage holin family protein;protein_id=WP_031281240.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2958251 2958697 . + . ID=gene-NLI98_RS14340;Name=NLI98_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14340;old_locus_tag=NLI98_14335 NZ_CP100601.1 Protein Homology CDS 2958251 2958697 . + 0 ID=cds-WP_031280381.1;Parent=gene-NLI98_RS14340;Dbxref=Genbank:WP_031280381.1;Name=WP_031280381.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033230.2;locus_tag=NLI98_RS14340;product=hypothetical protein;protein_id=WP_031280381.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2958603 2958860 . - . ID=gene-NLI98_RS14345;Name=NLI98_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14345;old_locus_tag=NLI98_14340 NZ_CP100601.1 Protein Homology CDS 2958603 2958860 . - 0 ID=cds-WP_004184721.1;Parent=gene-NLI98_RS14345;Dbxref=Genbank:WP_004184721.1;Name=WP_004184721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184721.1;locus_tag=NLI98_RS14345;product=hypothetical protein;protein_id=WP_004184721.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2959014 2959796 . - . ID=gene-NLI98_RS14350;Name=NLI98_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14350;old_locus_tag=NLI98_14345 NZ_CP100601.1 Protein Homology CDS 2959014 2959796 . - 0 ID=cds-WP_064156004.1;Parent=gene-NLI98_RS14350;Dbxref=Genbank:WP_064156004.1;Name=WP_064156004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226554.1;locus_tag=NLI98_RS14350;product=antitermination protein;protein_id=WP_064156004.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2959793 2960269 . - . ID=gene-NLI98_RS14355;Name=NLI98_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14355;old_locus_tag=NLI98_14350 NZ_CP100601.1 GeneMarkS-2+ CDS 2959793 2960269 . - 0 ID=cds-WP_049109620.1;Parent=gene-NLI98_RS14355;Dbxref=Genbank:WP_049109620.1;Name=WP_049109620.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS14355;product=hypothetical protein;protein_id=WP_049109620.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2960351 2960719 . - . ID=gene-NLI98_RS14360;Name=NLI98_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14360;old_locus_tag=NLI98_14355 NZ_CP100601.1 Protein Homology CDS 2960351 2960719 . - 0 ID=cds-WP_049109615.1;Parent=gene-NLI98_RS14360;Dbxref=Genbank:WP_049109615.1;Name=WP_049109615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190680.1;locus_tag=NLI98_RS14360;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_049109615.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2960706 2962085 . - . ID=gene-NLI98_RS14365;Name=NLI98_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14365;old_locus_tag=NLI98_14360 NZ_CP100601.1 Protein Homology CDS 2960706 2962085 . - 0 ID=cds-WP_023328640.1;Parent=gene-NLI98_RS14365;Dbxref=Genbank:WP_023328640.1;Name=WP_023328640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803652.1;locus_tag=NLI98_RS14365;product=replicative DNA helicase;protein_id=WP_023328640.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2962082 2962960 . - . ID=gene-NLI98_RS14370;Name=NLI98_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14370;old_locus_tag=NLI98_14365 NZ_CP100601.1 Protein Homology CDS 2962082 2962960 . - 0 ID=cds-WP_049109614.1;Parent=gene-NLI98_RS14370;Dbxref=Genbank:WP_049109614.1;Name=WP_049109614.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803654.1;locus_tag=NLI98_RS14370;product=ATP-binding protein;protein_id=WP_049109614.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2962972 2963802 . - . ID=gene-NLI98_RS14375;Name=NLI98_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14375;old_locus_tag=NLI98_14370 NZ_CP100601.1 Protein Homology CDS 2962972 2963802 . - 0 ID=cds-WP_049109612.1;Parent=gene-NLI98_RS14375;Dbxref=Genbank:WP_049109612.1;Name=WP_049109612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000061543.1;locus_tag=NLI98_RS14375;product=helix-turn-helix domain-containing protein;protein_id=WP_049109612.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2963799 2963987 . - . ID=gene-NLI98_RS14380;Name=NLI98_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14380;old_locus_tag=NLI98_14375 NZ_CP100601.1 Protein Homology CDS 2963799 2963987 . - 0 ID=cds-WP_032430925.1;Parent=gene-NLI98_RS14380;Dbxref=Genbank:WP_032430925.1;Name=WP_032430925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705431.1;locus_tag=NLI98_RS14380;product=DUF4222 domain-containing protein;protein_id=WP_032430925.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2964063 2964290 . - . ID=gene-NLI98_RS14385;Name=NLI98_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14385;old_locus_tag=NLI98_14380 NZ_CP100601.1 Protein Homology CDS 2964063 2964290 . - 0 ID=cds-WP_074187737.1;Parent=gene-NLI98_RS14385;Dbxref=Genbank:WP_074187737.1;Name=WP_074187737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705432.1;locus_tag=NLI98_RS14385;product=YdaS family helix-turn-helix protein;protein_id=WP_074187737.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2964415 2965122 . + . ID=gene-NLI98_RS14390;Name=NLI98_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14390;old_locus_tag=NLI98_14385 NZ_CP100601.1 Protein Homology CDS 2964415 2965122 . + 0 ID=cds-WP_023328643.1;Parent=gene-NLI98_RS14390;Dbxref=Genbank:WP_023328643.1;Name=WP_023328643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705433.1;locus_tag=NLI98_RS14390;product=helix-turn-helix transcriptional regulator;protein_id=WP_023328643.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2965281 2965589 . + . ID=gene-NLI98_RS14395;Name=NLI98_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14395;old_locus_tag=NLI98_14390 NZ_CP100601.1 GeneMarkS-2+ CDS 2965281 2965589 . + 0 ID=cds-WP_019705434.1;Parent=gene-NLI98_RS14395;Dbxref=Genbank:WP_019705434.1;Name=WP_019705434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS14395;product=hypothetical protein;protein_id=WP_019705434.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2965579 2965773 . + . ID=gene-NLI98_RS14400;Name=NLI98_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14400;old_locus_tag=NLI98_14395 NZ_CP100601.1 Protein Homology CDS 2965579 2965773 . + 0 ID=cds-WP_019705435.1;Parent=gene-NLI98_RS14400;Dbxref=Genbank:WP_019705435.1;Name=WP_019705435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015570948.1;locus_tag=NLI98_RS14400;product=hypothetical protein;protein_id=WP_019705435.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2965944 2966168 . + . ID=gene-NLI98_RS14405;Name=NLI98_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14405;old_locus_tag=NLI98_14400 NZ_CP100601.1 Protein Homology CDS 2965944 2966168 . + 0 ID=cds-WP_019705436.1;Parent=gene-NLI98_RS14405;Dbxref=Genbank:WP_019705436.1;Name=WP_019705436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177202.1;locus_tag=NLI98_RS14405;product=hypothetical protein;protein_id=WP_019705436.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2966169 2966501 . + . ID=gene-NLI98_RS14410;Name=NLI98_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14410;old_locus_tag=NLI98_14405 NZ_CP100601.1 Protein Homology CDS 2966169 2966501 . + 0 ID=cds-WP_064156006.1;Parent=gene-NLI98_RS14410;Dbxref=Genbank:WP_064156006.1;Name=WP_064156006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152158.1;locus_tag=NLI98_RS14410;product=hypothetical protein;protein_id=WP_064156006.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2966527 2966781 . + . ID=gene-NLI98_RS14415;Name=NLI98_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14415;old_locus_tag=NLI98_14410 NZ_CP100601.1 Protein Homology CDS 2966527 2966781 . + 0 ID=cds-WP_040186816.1;Parent=gene-NLI98_RS14415;Dbxref=Genbank:WP_040186816.1;Name=WP_040186816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152157.1;locus_tag=NLI98_RS14415;product=hypothetical protein;protein_id=WP_040186816.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2966753 2966971 . + . ID=gene-NLI98_RS14420;Name=NLI98_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14420;old_locus_tag=NLI98_14415 NZ_CP100601.1 Protein Homology CDS 2966753 2966971 . + 0 ID=cds-WP_141097430.1;Parent=gene-NLI98_RS14420;Dbxref=Genbank:WP_141097430.1;Name=WP_141097430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001336513.1;locus_tag=NLI98_RS14420;product=hypothetical protein;protein_id=WP_141097430.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2966968 2967393 . + . ID=gene-NLI98_RS14425;Name=NLI98_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14425;old_locus_tag=NLI98_14420 NZ_CP100601.1 Protein Homology CDS 2966968 2967393 . + 0 ID=cds-WP_004152156.1;Parent=gene-NLI98_RS14425;Dbxref=Genbank:WP_004152156.1;Name=WP_004152156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226545.1;locus_tag=NLI98_RS14425;product=hypothetical protein;protein_id=WP_004152156.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2967390 2967584 . + . ID=gene-NLI98_RS14430;Name=NLI98_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14430;old_locus_tag=NLI98_14425 NZ_CP100601.1 Protein Homology CDS 2967390 2967584 . + 0 ID=cds-WP_009309071.1;Parent=gene-NLI98_RS14430;Dbxref=Genbank:WP_009309071.1;Name=WP_009309071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226544.1;locus_tag=NLI98_RS14430;product=hypothetical protein;protein_id=WP_009309071.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2967581 2968408 . + . ID=gene-NLI98_RS14435;Name=NLI98_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14435;old_locus_tag=NLI98_14430 NZ_CP100601.1 Protein Homology CDS 2967581 2968408 . + 0 ID=cds-WP_023304718.1;Parent=gene-NLI98_RS14435;Dbxref=Genbank:WP_023304718.1;Name=WP_023304718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226543.1;locus_tag=NLI98_RS14435;product=SPFH domain-containing protein;protein_id=WP_023304718.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2968513 2969031 . + . ID=gene-NLI98_RS14440;Name=NLI98_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14440;old_locus_tag=NLI98_14435 NZ_CP100601.1 Protein Homology CDS 2968513 2969031 . + 0 ID=cds-WP_032430926.1;Parent=gene-NLI98_RS14440;Dbxref=Genbank:WP_032430926.1;Name=WP_032430926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226542.1;locus_tag=NLI98_RS14440;product=hypothetical protein;protein_id=WP_032430926.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2969037 2969762 . + . ID=gene-NLI98_RS14445;Name=NLI98_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14445;old_locus_tag=NLI98_14440 NZ_CP100601.1 Protein Homology CDS 2969037 2969762 . + 0 ID=cds-WP_032428838.1;Parent=gene-NLI98_RS14445;Dbxref=Genbank:WP_032428838.1;Name=WP_032428838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705442.1;locus_tag=NLI98_RS14445;product=Rha family transcriptional regulator;protein_id=WP_032428838.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2969752 2969976 . + . ID=gene-NLI98_RS14450;Name=NLI98_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14450;old_locus_tag=NLI98_14445 NZ_CP100601.1 Protein Homology CDS 2969752 2969976 . + 0 ID=cds-WP_032441508.1;Parent=gene-NLI98_RS14450;Dbxref=Genbank:WP_032441508.1;Name=WP_032441508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226540.1;locus_tag=NLI98_RS14450;product=hypothetical protein;protein_id=WP_032441508.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2969973 2970374 . + . ID=gene-NLI98_RS14455;Name=NLI98_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14455;old_locus_tag=NLI98_14450 NZ_CP100601.1 GeneMarkS-2+ CDS 2969973 2970374 . + 0 ID=cds-WP_064156008.1;Parent=gene-NLI98_RS14455;Dbxref=Genbank:WP_064156008.1;Name=WP_064156008.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS14455;product=hypothetical protein;protein_id=WP_064156008.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2970447 2970593 . + . ID=gene-NLI98_RS14460;Name=NLI98_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14460;old_locus_tag=NLI98_14455 NZ_CP100601.1 Protein Homology CDS 2970447 2970593 . + 0 ID=cds-WP_004198245.1;Parent=gene-NLI98_RS14460;Dbxref=Genbank:WP_004198245.1;Name=WP_004198245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226537.1;locus_tag=NLI98_RS14460;product=hypothetical protein;protein_id=WP_004198245.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2970604 2970795 . + . ID=gene-NLI98_RS14465;Name=NLI98_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14465;old_locus_tag=NLI98_14460 NZ_CP100601.1 Protein Homology CDS 2970604 2970795 . + 0 ID=cds-WP_004198241.1;Parent=gene-NLI98_RS14465;Dbxref=Genbank:WP_004198241.1;Name=WP_004198241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198241.1;locus_tag=NLI98_RS14465;product=hypothetical protein;protein_id=WP_004198241.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2970776 2971957 . - . ID=gene-NLI98_RS14470;Name=NLI98_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14470;old_locus_tag=NLI98_14465 NZ_CP100601.1 Protein Homology CDS 2970776 2971957 . - 0 ID=cds-WP_064156009.1;Parent=gene-NLI98_RS14470;Dbxref=Genbank:WP_064156009.1;Name=WP_064156009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226536.1;locus_tag=NLI98_RS14470;product=site-specific integrase;protein_id=WP_064156009.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2972154 2972702 . + . ID=gene-NLI98_RS14475;Name=NLI98_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14475;old_locus_tag=NLI98_14470 NZ_CP100601.1 Protein Homology CDS 2972154 2972702 . + 0 ID=cds-WP_016197745.1;Parent=gene-NLI98_RS14475;Dbxref=Genbank:WP_016197745.1;Name=WP_016197745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016197745.1;locus_tag=NLI98_RS14475;product=DJ-1/PfpI family protein;protein_id=WP_016197745.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2972901 2974433 . - . ID=gene-NLI98_RS14480;Name=NLI98_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14480;old_locus_tag=NLI98_14475 NZ_CP100601.1 Protein Homology CDS 2972901 2974433 . - 0 ID=cds-WP_004183778.1;Parent=gene-NLI98_RS14480;Dbxref=Genbank:WP_004183778.1;Name=WP_004183778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226534.1;locus_tag=NLI98_RS14480;product=HD domain-containing protein;protein_id=WP_004183778.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2974650 2975411 . - . ID=gene-NLI98_RS14485;Name=NLI98_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14485;old_locus_tag=NLI98_14480 NZ_CP100601.1 Protein Homology CDS 2974650 2975411 . - 0 ID=cds-WP_004176437.1;Parent=gene-NLI98_RS14485;Dbxref=Genbank:WP_004176437.1;Name=WP_004176437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226533.1;locus_tag=NLI98_RS14485;product=SDR family oxidoreductase;protein_id=WP_004176437.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2975520 2976434 . + . ID=gene-NLI98_RS14490;Name=NLI98_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14490;old_locus_tag=NLI98_14485 NZ_CP100601.1 Protein Homology CDS 2975520 2976434 . + 0 ID=cds-WP_004179529.1;Parent=gene-NLI98_RS14490;Dbxref=Genbank:WP_004179529.1;Name=WP_004179529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226532.1;locus_tag=NLI98_RS14490;product=LysR family transcriptional regulator;protein_id=WP_004179529.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2976736 2976924 . + . ID=gene-NLI98_RS14495;Name=NLI98_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14495;old_locus_tag=NLI98_14490 NZ_CP100601.1 Protein Homology CDS 2976736 2976924 . + 0 ID=cds-WP_004183775.1;Parent=gene-NLI98_RS14495;Dbxref=Genbank:WP_004183775.1;Name=WP_004183775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183775.1;locus_tag=NLI98_RS14495;product=hypothetical protein;protein_id=WP_004183775.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2976996 2977439 . - . ID=gene-NLI98_RS14500;Name=NLI98_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14500;old_locus_tag=NLI98_14495 NZ_CP100601.1 Protein Homology CDS 2976996 2977439 . - 0 ID=cds-WP_014907732.1;Parent=gene-NLI98_RS14500;Dbxref=Genbank:WP_014907732.1;Name=WP_014907732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183772.1;locus_tag=NLI98_RS14500;product=ATP-binding protein;protein_id=WP_014907732.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2977459 2977797 . - . ID=gene-NLI98_RS14505;Name=NLI98_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14505;old_locus_tag=NLI98_14500 NZ_CP100601.1 Protein Homology CDS 2977459 2977797 . - 0 ID=cds-WP_064278408.1;Parent=gene-NLI98_RS14505;Dbxref=Genbank:WP_064278408.1;Name=WP_064278408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183770.1;locus_tag=NLI98_RS14505;product=STAS domain-containing protein;protein_id=WP_064278408.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2977787 2979001 . - . ID=gene-NLI98_RS14510;Name=NLI98_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14510;old_locus_tag=NLI98_14505 NZ_CP100601.1 Protein Homology CDS 2977787 2979001 . - 0 ID=cds-WP_019705448.1;Parent=gene-NLI98_RS14510;Dbxref=Genbank:WP_019705448.1;Name=WP_019705448.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805202.1;locus_tag=NLI98_RS14510;product=SpoIIE family protein phosphatase;protein_id=WP_019705448.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2979010 2979909 . - . ID=gene-NLI98_RS14515;Name=NLI98_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14515;old_locus_tag=NLI98_14510 NZ_CP100601.1 Protein Homology CDS 2979010 2979909 . - 0 ID=cds-WP_004892665.1;Parent=gene-NLI98_RS14515;Dbxref=Genbank:WP_004892665.1;Name=WP_004892665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324874.1;locus_tag=NLI98_RS14515;product=hypothetical protein;protein_id=WP_004892665.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 2979920 2981133 . - . ID=gene-NLI98_RS14520;Name=NLI98_RS14520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS14520;old_locus_tag=NLI98_14515;pseudo=true NZ_CP100601.1 Protein Homology CDS 2979920 2981133 . - 0 ID=cds-NLI98_RS14520;Parent=gene-NLI98_RS14520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705449.1;locus_tag=NLI98_RS14520;product=OpgC domain-containing protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 2981410 2983227 . + . ID=gene-NLI98_RS14525;Name=NLI98_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14525;old_locus_tag=NLI98_14520 NZ_CP100601.1 Protein Homology CDS 2981410 2983227 . + 0 ID=cds-WP_019704221.1;Parent=gene-NLI98_RS14525;Dbxref=Genbank:WP_019704221.1;Name=WP_019704221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704221.1;locus_tag=NLI98_RS14525;product=glycosyltransferase;protein_id=WP_019704221.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2983224 2984555 . + . ID=gene-NLI98_RS14530;Name=NLI98_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14530;old_locus_tag=NLI98_14525 NZ_CP100601.1 Protein Homology CDS 2983224 2984555 . + 0 ID=cds-WP_064278406.1;Parent=gene-NLI98_RS14530;Dbxref=Genbank:WP_064278406.1;Name=WP_064278406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183757.1;locus_tag=NLI98_RS14530;product=DUF3131 domain-containing protein;protein_id=WP_064278406.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2984552 2986099 . + . ID=gene-NLI98_RS14535;Name=NLI98_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14535;old_locus_tag=NLI98_14530 NZ_CP100601.1 Protein Homology CDS 2984552 2986099 . + 0 ID=cds-WP_004183756.1;Parent=gene-NLI98_RS14535;Dbxref=Genbank:WP_004183756.1;Name=WP_004183756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179509.1;locus_tag=NLI98_RS14535;product=DUF3131 domain-containing protein;protein_id=WP_004183756.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2986084 2987478 . + . ID=gene-NLI98_RS14540;Name=NLI98_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14540;old_locus_tag=NLI98_14535 NZ_CP100601.1 Protein Homology CDS 2986084 2987478 . + 0 ID=cds-WP_064278405.1;Parent=gene-NLI98_RS14540;Dbxref=Genbank:WP_064278405.1;Name=WP_064278405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179507.1;locus_tag=NLI98_RS14540;product=DUF3131 domain-containing protein;protein_id=WP_064278405.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2987475 2987909 . + . ID=gene-NLI98_RS14545;Name=NLI98_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14545;old_locus_tag=NLI98_14540 NZ_CP100601.1 Protein Homology CDS 2987475 2987909 . + 0 ID=cds-WP_064278404.1;Parent=gene-NLI98_RS14545;Dbxref=Genbank:WP_064278404.1;Name=WP_064278404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705453.1;locus_tag=NLI98_RS14545;product=globin;protein_id=WP_064278404.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2987912 2990605 . + . ID=gene-NLI98_RS14550;Name=NLI98_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14550;old_locus_tag=NLI98_14545 NZ_CP100601.1 Protein Homology CDS 2987912 2990605 . + 0 ID=cds-WP_032419052.1;Parent=gene-NLI98_RS14550;Dbxref=Genbank:WP_032419052.1;Name=WP_032419052.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805209.1;locus_tag=NLI98_RS14550;product=response regulator;protein_id=WP_032419052.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2990595 2992793 . + . ID=gene-NLI98_RS14555;Name=NLI98_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14555;old_locus_tag=NLI98_14550 NZ_CP100601.1 Protein Homology CDS 2990595 2992793 . + 0 ID=cds-WP_062920783.1;Parent=gene-NLI98_RS14555;Dbxref=Genbank:WP_062920783.1;Name=WP_062920783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183743.1;locus_tag=NLI98_RS14555;product=glycoside hydrolase;protein_id=WP_062920783.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2992818 2993687 . - . ID=gene-NLI98_RS14560;Name=NLI98_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14560;old_locus_tag=NLI98_14555 NZ_CP100601.1 Protein Homology CDS 2992818 2993687 . - 0 ID=cds-WP_004152141.1;Parent=gene-NLI98_RS14560;Dbxref=Genbank:WP_004152141.1;Name=WP_004152141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226529.1;locus_tag=NLI98_RS14560;product=aldo/keto reductase;protein_id=WP_004152141.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2993766 2994968 . - . ID=gene-NLI98_RS14565;Name=NLI98_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14565;old_locus_tag=NLI98_14560 NZ_CP100601.1 Protein Homology CDS 2993766 2994968 . - 0 ID=cds-WP_088498404.1;Parent=gene-NLI98_RS14565;Dbxref=Genbank:WP_088498404.1;Name=WP_088498404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226528.1;locus_tag=NLI98_RS14565;product=MFS transporter;protein_id=WP_088498404.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2995041 2996177 . - . ID=gene-NLI98_RS14570;Name=NLI98_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14570;old_locus_tag=NLI98_14565 NZ_CP100601.1 Protein Homology CDS 2995041 2996177 . - 0 ID=cds-WP_004888562.1;Parent=gene-NLI98_RS14570;Dbxref=Genbank:WP_004888562.1;Name=WP_004888562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226527.1;locus_tag=NLI98_RS14570;product=alpha/beta hydrolase;protein_id=WP_004888562.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2996350 2997234 . + . ID=gene-NLI98_RS14575;Name=NLI98_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14575;old_locus_tag=NLI98_14570 NZ_CP100601.1 Protein Homology CDS 2996350 2997234 . + 0 ID=cds-WP_004152138.1;Parent=gene-NLI98_RS14575;Dbxref=Genbank:WP_004152138.1;Name=WP_004152138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226526.1;locus_tag=NLI98_RS14575;product=LysR family transcriptional regulator;protein_id=WP_004152138.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2997359 2998192 . - . ID=gene-NLI98_RS14580;Name=NLI98_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14580;old_locus_tag=NLI98_14575 NZ_CP100601.1 Protein Homology CDS 2997359 2998192 . - 0 ID=cds-WP_004888565.1;Parent=gene-NLI98_RS14580;Dbxref=Genbank:WP_004888565.1;Name=WP_004888565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226525.1;locus_tag=NLI98_RS14580;product=DUF6216 family protein;protein_id=WP_004888565.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2998423 2998809 . + . ID=gene-NLI98_RS14585;Name=NLI98_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14585;old_locus_tag=NLI98_14580 NZ_CP100601.1 Protein Homology CDS 2998423 2998809 . + 0 ID=cds-WP_004140226.1;Parent=gene-NLI98_RS14585;Dbxref=Genbank:WP_004140226.1;Name=WP_004140226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226524.1;locus_tag=NLI98_RS14585;product=glyoxalase/bleomycin resistance/dioxygenase family protein;protein_id=WP_004140226.1;transl_table=11 NZ_CP100601.1 RefSeq gene 2998977 3000593 . - . ID=gene-NLI98_RS14590;Name=NLI98_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14590;old_locus_tag=NLI98_14585 NZ_CP100601.1 Protein Homology CDS 2998977 3000593 . - 0 ID=cds-WP_004176446.1;Parent=gene-NLI98_RS14590;Dbxref=Genbank:WP_004176446.1;Name=WP_004176446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226523.1;locus_tag=NLI98_RS14590;product=peptide ABC transporter substrate-binding protein;protein_id=WP_004176446.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3000590 3000706 . - . ID=gene-NLI98_RS14595;Name=NLI98_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14595;old_locus_tag=NLI98_14590 NZ_CP100601.1 Protein Homology CDS 3000590 3000706 . - 0 ID=cds-WP_004148146.1;Parent=gene-NLI98_RS14595;Dbxref=Genbank:WP_004148146.1;Name=WP_004148146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226522.1;locus_tag=NLI98_RS14595;product=hypothetical protein;protein_id=WP_004148146.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3000779 3001486 . + . ID=gene-NLI98_RS14600;Name=mpaA;gbkey=Gene;gene=mpaA;gene_biotype=protein_coding;locus_tag=NLI98_RS14600;old_locus_tag=NLI98_14595 NZ_CP100601.1 Protein Homology CDS 3000779 3001486 . + 0 ID=cds-WP_004152134.1;Parent=gene-NLI98_RS14600;Dbxref=Genbank:WP_004152134.1;Name=WP_004152134.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;gene=mpaA;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226521.1;locus_tag=NLI98_RS14600;product=murein tripeptide amidase MpaA;protein_id=WP_004152134.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3001483 3002448 . - . ID=gene-NLI98_RS14605;Name=ycjG;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=NLI98_RS14605;old_locus_tag=NLI98_14600 NZ_CP100601.1 Protein Homology CDS 3001483 3002448 . - 0 ID=cds-WP_015958237.1;Parent=gene-NLI98_RS14605;Dbxref=Genbank:WP_015958237.1;Name=WP_015958237.1;Ontology_term=GO:0009063,GO:0016855;gbkey=CDS;gene=ycjG;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226520.1;locus_tag=NLI98_RS14605;product=L-Ala-D/L-Glu epimerase;protein_id=WP_015958237.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3002551 3003057 . + . ID=gene-NLI98_RS14610;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=NLI98_RS14610;old_locus_tag=NLI98_14605 NZ_CP100601.1 Protein Homology CDS 3002551 3003057 . + 0 ID=cds-WP_004152131.1;Parent=gene-NLI98_RS14610;Dbxref=Genbank:WP_004152131.1;Name=WP_004152131.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226519.1;locus_tag=NLI98_RS14610;product=thiol peroxidase;protein_id=WP_004152131.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3003128 3004180 . - . ID=gene-NLI98_RS14615;Name=NLI98_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14615;old_locus_tag=NLI98_14610 NZ_CP100601.1 Protein Homology CDS 3003128 3004180 . - 0 ID=cds-WP_004183734.1;Parent=gene-NLI98_RS14615;Dbxref=Genbank:WP_004183734.1;Name=WP_004183734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152128.1;locus_tag=NLI98_RS14615;product=AbrB family transcriptional regulator;protein_id=WP_004183734.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3004282 3005823 . - . ID=gene-NLI98_RS14620;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=NLI98_RS14620;old_locus_tag=NLI98_14615 NZ_CP100601.1 Protein Homology CDS 3004282 3005823 . - 0 ID=cds-WP_002901979.1;Parent=gene-NLI98_RS14620;Dbxref=Genbank:WP_002901979.1;Name=WP_002901979.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226517.1;locus_tag=NLI98_RS14620;product=transcriptional regulator TyrR;protein_id=WP_002901979.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3005996 3007309 . - . ID=gene-NLI98_RS14625;Name=NLI98_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14625;old_locus_tag=NLI98_14620 NZ_CP100601.1 Protein Homology CDS 3005996 3007309 . - 0 ID=cds-WP_002901977.1;Parent=gene-NLI98_RS14625;Dbxref=Genbank:WP_002901977.1;Name=WP_002901977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226516.1;locus_tag=NLI98_RS14625;product=6-phospho-beta-glucosidase;protein_id=WP_002901977.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3007453 3008322 . + . ID=gene-NLI98_RS14630;Name=NLI98_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14630;old_locus_tag=NLI98_14625 NZ_CP100601.1 Protein Homology CDS 3007453 3008322 . + 0 ID=cds-WP_223177632.1;Parent=gene-NLI98_RS14630;Dbxref=Genbank:WP_223177632.1;Name=WP_223177632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016947426.1;locus_tag=NLI98_RS14630;product=LysR substrate-binding domain-containing protein;protein_id=WP_223177632.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3008412 3009473 . - . ID=gene-NLI98_RS14635;Name=NLI98_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14635;old_locus_tag=NLI98_14630 NZ_CP100601.1 Protein Homology CDS 3008412 3009473 . - 0 ID=cds-WP_023283587.1;Parent=gene-NLI98_RS14635;Dbxref=Genbank:WP_023283587.1;Name=WP_023283587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803562.1;locus_tag=NLI98_RS14635;product=YcjF family protein;protein_id=WP_023283587.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3009470 3010867 . - . ID=gene-NLI98_RS14640;Name=NLI98_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14640;old_locus_tag=NLI98_14635 NZ_CP100601.1 Protein Homology CDS 3009470 3010867 . - 0 ID=cds-WP_002901917.1;Parent=gene-NLI98_RS14640;Dbxref=Genbank:WP_002901917.1;Name=WP_002901917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126510.1;locus_tag=NLI98_RS14640;product=YcjX family protein;protein_id=WP_002901917.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3010970 3011188 . - . ID=gene-NLI98_RS14645;Name=pspD;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=NLI98_RS14645;old_locus_tag=NLI98_14640 NZ_CP100601.1 Protein Homology CDS 3010970 3011188 . - 0 ID=cds-WP_002901915.1;Parent=gene-NLI98_RS14645;Dbxref=Genbank:WP_002901915.1;Name=WP_002901915.1;gbkey=CDS;gene=pspD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226512.1;locus_tag=NLI98_RS14645;product=phage shock protein PspD;protein_id=WP_002901915.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3011217 3011576 . - . ID=gene-NLI98_RS14650;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=NLI98_RS14650;old_locus_tag=NLI98_14645 NZ_CP100601.1 Protein Homology CDS 3011217 3011576 . - 0 ID=cds-WP_002901913.1;Parent=gene-NLI98_RS14650;Dbxref=Genbank:WP_002901913.1;Name=WP_002901913.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226511.1;locus_tag=NLI98_RS14650;product=envelope stress response membrane protein PspC;protein_id=WP_002901913.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3011576 3011800 . - . ID=gene-NLI98_RS14655;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=NLI98_RS14655;old_locus_tag=NLI98_14650 NZ_CP100601.1 Protein Homology CDS 3011576 3011800 . - 0 ID=cds-WP_002901911.1;Parent=gene-NLI98_RS14655;Dbxref=Genbank:WP_002901911.1;Name=WP_002901911.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226510.1;locus_tag=NLI98_RS14655;product=envelope stress response membrane protein PspB;protein_id=WP_002901911.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3011856 3012524 . - . ID=gene-NLI98_RS14660;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=NLI98_RS14660;old_locus_tag=NLI98_14655 NZ_CP100601.1 Protein Homology CDS 3011856 3012524 . - 0 ID=cds-WP_002901908.1;Parent=gene-NLI98_RS14660;Dbxref=Genbank:WP_002901908.1;Name=WP_002901908.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226509.1;locus_tag=NLI98_RS14660;product=phage shock protein PspA;protein_id=WP_002901908.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3012677 3013666 . + . ID=gene-NLI98_RS14665;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=NLI98_RS14665;old_locus_tag=NLI98_14660 NZ_CP100601.1 Protein Homology CDS 3012677 3013666 . + 0 ID=cds-WP_009309090.1;Parent=gene-NLI98_RS14665;Dbxref=Genbank:WP_009309090.1;Name=WP_009309090.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226508.1;locus_tag=NLI98_RS14665;product=phage shock protein operon transcriptional activator;protein_id=WP_009309090.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3013657 3015048 . - . ID=gene-NLI98_RS14670;Name=NLI98_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14670;old_locus_tag=NLI98_14665 NZ_CP100601.1 Protein Homology CDS 3013657 3015048 . - 0 ID=cds-WP_004888594.1;Parent=gene-NLI98_RS14670;Dbxref=Genbank:WP_004888594.1;Name=WP_004888594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226507.1;locus_tag=NLI98_RS14670;product=MFS transporter;protein_id=WP_004888594.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3015074 3016243 . - . ID=gene-NLI98_RS14675;Name=NLI98_RS14675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14675;old_locus_tag=NLI98_14670 NZ_CP100601.1 Protein Homology CDS 3015074 3016243 . - 0 ID=cds-WP_002901900.1;Parent=gene-NLI98_RS14675;Dbxref=Genbank:WP_002901900.1;Name=WP_002901900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226506.1;locus_tag=NLI98_RS14675;product=M20 family metallopeptidase;protein_id=WP_002901900.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3016415 3018724 . + . ID=gene-NLI98_RS14680;Name=NLI98_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14680;old_locus_tag=NLI98_14675 NZ_CP100601.1 Protein Homology CDS 3016415 3018724 . + 0 ID=cds-WP_064278399.1;Parent=gene-NLI98_RS14680;Dbxref=Genbank:WP_064278399.1;Name=WP_064278399.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226505.1;locus_tag=NLI98_RS14680;product=helix-turn-helix domain-containing protein;protein_id=WP_064278399.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3018703 3019533 . - . ID=gene-NLI98_RS14685;Name=NLI98_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14685;old_locus_tag=NLI98_14680 NZ_CP100601.1 Protein Homology CDS 3018703 3019533 . - 0 ID=cds-WP_019705465.1;Parent=gene-NLI98_RS14685;Dbxref=Genbank:WP_019705465.1;Name=WP_019705465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226504.1;locus_tag=NLI98_RS14685;product=helix-turn-helix transcriptional regulator;protein_id=WP_019705465.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3019641 3020549 . + . ID=gene-NLI98_RS14690;Name=NLI98_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14690;old_locus_tag=NLI98_14685 NZ_CP100601.1 Protein Homology CDS 3019641 3020549 . + 0 ID=cds-WP_020803555.1;Parent=gene-NLI98_RS14690;Dbxref=Genbank:WP_020803555.1;Name=WP_020803555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226503.1;locus_tag=NLI98_RS14690;product=SDR family oxidoreductase;protein_id=WP_020803555.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3020883 3022526 . + . ID=gene-NLI98_RS14695;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=NLI98_RS14695;old_locus_tag=NLI98_14690 NZ_CP100601.1 Protein Homology CDS 3020883 3022526 . + 0 ID=cds-WP_002901817.1;Parent=gene-NLI98_RS14695;Dbxref=Genbank:WP_002901817.1;Name=WP_002901817.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=sapA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460650.1;locus_tag=NLI98_RS14695;product=peptide ABC transporter substrate-binding protein SapA;protein_id=WP_002901817.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3022523 3023488 . + . ID=gene-NLI98_RS14700;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=NLI98_RS14700;old_locus_tag=NLI98_14695 NZ_CP100601.1 Protein Homology CDS 3022523 3023488 . + 0 ID=cds-WP_002901816.1;Parent=gene-NLI98_RS14700;Dbxref=Genbank:WP_002901816.1;Name=WP_002901816.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126482.1;locus_tag=NLI98_RS14700;product=putrescine ABC transporter permease SapB;protein_id=WP_002901816.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3023475 3024365 . + . ID=gene-NLI98_RS14705;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=NLI98_RS14705;old_locus_tag=NLI98_14700 NZ_CP100601.1 Protein Homology CDS 3023475 3024365 . + 0 ID=cds-WP_004151901.1;Parent=gene-NLI98_RS14705;Dbxref=Genbank:WP_004151901.1;Name=WP_004151901.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014838220.1;locus_tag=NLI98_RS14705;product=peptide ABC transporter permease SapC;protein_id=WP_004151901.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3024365 3025357 . + . ID=gene-NLI98_RS14710;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=NLI98_RS14710;old_locus_tag=NLI98_14705 NZ_CP100601.1 Protein Homology CDS 3024365 3025357 . + 0 ID=cds-WP_004140266.1;Parent=gene-NLI98_RS14710;Dbxref=Genbank:WP_004140266.1;Name=WP_004140266.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226498.1;locus_tag=NLI98_RS14710;product=peptide ABC transporter ATP-binding protein SapD;protein_id=WP_004140266.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3025359 3026168 . + . ID=gene-NLI98_RS14715;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=NLI98_RS14715;old_locus_tag=NLI98_14710 NZ_CP100601.1 Protein Homology CDS 3025359 3026168 . + 0 ID=cds-WP_004140269.1;Parent=gene-NLI98_RS14715;Dbxref=Genbank:WP_004140269.1;Name=WP_004140269.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226497.1;locus_tag=NLI98_RS14715;product=peptide ABC transporter ATP-binding protein SapF;protein_id=WP_004140269.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3026213 3027592 . - . ID=gene-NLI98_RS14720;Name=NLI98_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14720;old_locus_tag=NLI98_14715 NZ_CP100601.1 Protein Homology CDS 3026213 3027592 . - 0 ID=cds-WP_048333587.1;Parent=gene-NLI98_RS14720;Dbxref=Genbank:WP_048333587.1;Name=WP_048333587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226496.1;locus_tag=NLI98_RS14720;product=cytosine permease;protein_id=WP_048333587.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3027840 3028382 . + . ID=gene-NLI98_RS14725;Name=NLI98_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14725;old_locus_tag=NLI98_14720 NZ_CP100601.1 Protein Homology CDS 3027840 3028382 . + 0 ID=cds-WP_004152967.1;Parent=gene-NLI98_RS14725;Dbxref=Genbank:WP_004152967.1;Name=WP_004152967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226495.1;locus_tag=NLI98_RS14725;product=HutD family protein;protein_id=WP_004152967.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3028581 3029369 . + . ID=gene-NLI98_RS14730;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=NLI98_RS14730;old_locus_tag=NLI98_14725 NZ_CP100601.1 Protein Homology CDS 3028581 3029369 . + 0 ID=cds-WP_004140277.1;Parent=gene-NLI98_RS14730;Dbxref=Genbank:WP_004140277.1;Name=WP_004140277.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=NLI98_RS14730;product=enoyl-ACP reductase FabI;protein_id=WP_004140277.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3029560 3030717 . + . ID=gene-NLI98_RS14735;Name=NLI98_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14735;old_locus_tag=NLI98_14730 NZ_CP100601.1 Protein Homology CDS 3029560 3030717 . + 0 ID=cds-WP_004151905.1;Parent=gene-NLI98_RS14735;Dbxref=Genbank:WP_004151905.1;Name=WP_004151905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226492.1;locus_tag=NLI98_RS14735;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_004151905.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3030799 3032733 . + . ID=gene-NLI98_RS14740;Name=NLI98_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14740;old_locus_tag=NLI98_14735 NZ_CP100601.1 Protein Homology CDS 3030799 3032733 . + 0 ID=cds-WP_004179478.1;Parent=gene-NLI98_RS14740;Dbxref=Genbank:WP_004179478.1;Name=WP_004179478.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226491.1;locus_tag=NLI98_RS14740;product=exoribonuclease II;protein_id=WP_004179478.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3032892 3033071 . + . ID=gene-NLI98_RS14745;Name=NLI98_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14745;old_locus_tag=NLI98_14740 NZ_CP100601.1 Protein Homology CDS 3032892 3033071 . + 0 ID=cds-WP_002901786.1;Parent=gene-NLI98_RS14745;Dbxref=Genbank:WP_002901786.1;Name=WP_002901786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004892757.1;locus_tag=NLI98_RS14745;product=hypothetical protein;protein_id=WP_002901786.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3033143 3033892 . + . ID=gene-NLI98_RS14750;Name=NLI98_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14750;old_locus_tag=NLI98_14745 NZ_CP100601.1 Protein Homology CDS 3033143 3033892 . + 0 ID=cds-WP_002901785.1;Parent=gene-NLI98_RS14750;Dbxref=Genbank:WP_002901785.1;Name=WP_002901785.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226489.1;locus_tag=NLI98_RS14750;product=DNA-binding transcriptional regulator YciT;protein_id=WP_002901785.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3034168 3034386 . + . ID=gene-NLI98_RS14755;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=NLI98_RS14755;old_locus_tag=NLI98_14750 NZ_CP100601.1 Protein Homology CDS 3034168 3034386 . + 0 ID=cds-WP_002901783.1;Parent=gene-NLI98_RS14755;Dbxref=Genbank:WP_002901783.1;Name=WP_002901783.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460664.1;locus_tag=NLI98_RS14755;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_002901783.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3034518 3034844 . - . ID=gene-NLI98_RS14760;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=NLI98_RS14760;old_locus_tag=NLI98_14755 NZ_CP100601.1 Protein Homology CDS 3034518 3034844 . - 0 ID=cds-WP_048333586.1;Parent=gene-NLI98_RS14760;Dbxref=Genbank:WP_048333586.1;Name=WP_048333586.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226486.1;locus_tag=NLI98_RS14760;product=stress response translation initiation inhibitor YciH;protein_id=WP_048333586.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3034844 3035581 . - . ID=gene-NLI98_RS14765;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=NLI98_RS14765;old_locus_tag=NLI98_14760 NZ_CP100601.1 Protein Homology CDS 3034844 3035581 . - 0 ID=cds-WP_004151907.1;Parent=gene-NLI98_RS14765;Dbxref=Genbank:WP_004151907.1;Name=WP_004151907.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014907762.1;locus_tag=NLI98_RS14765;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_004151907.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3035773 3036942 . - . ID=gene-NLI98_RS14770;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=NLI98_RS14770;old_locus_tag=NLI98_14765 NZ_CP100601.1 Protein Homology CDS 3035773 3036942 . - 0 ID=cds-WP_002901781.1;Parent=gene-NLI98_RS14770;Dbxref=Genbank:WP_002901781.1;Name=WP_002901781.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000891373.1;locus_tag=NLI98_RS14770;product=lipopolysaccharide assembly protein LapB;protein_id=WP_002901781.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3036949 3037257 . - . ID=gene-NLI98_RS14775;Name=NLI98_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14775;old_locus_tag=NLI98_14770 NZ_CP100601.1 Protein Homology CDS 3036949 3037257 . - 0 ID=cds-WP_002901780.1;Parent=gene-NLI98_RS14775;Dbxref=Genbank:WP_002901780.1;Name=WP_002901780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226482.1;locus_tag=NLI98_RS14775;product=LapA family protein;protein_id=WP_002901780.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3037393 3038160 . - . ID=gene-NLI98_RS14780;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=NLI98_RS14780;old_locus_tag=NLI98_14775 NZ_CP100601.1 Protein Homology CDS 3037393 3038160 . - 0 ID=cds-WP_088498402.1;Parent=gene-NLI98_RS14780;Dbxref=Genbank:WP_088498402.1;Name=WP_088498402.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002901779.1;locus_tag=NLI98_RS14780;product=phosphatidylglycerophosphatase B;protein_id=WP_088498402.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3038324 3038926 . + . ID=gene-NLI98_RS14785;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=NLI98_RS14785;old_locus_tag=NLI98_14780 NZ_CP100601.1 Protein Homology CDS 3038324 3038926 . + 0 ID=cds-WP_002901778.1;Parent=gene-NLI98_RS14785;Dbxref=Genbank:WP_002901778.1;Name=WP_002901778.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226480.1;locus_tag=NLI98_RS14785;product=GTP cyclohydrolase II;protein_id=WP_002901778.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3038973 3041645 . - . ID=gene-NLI98_RS14790;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=NLI98_RS14790;old_locus_tag=NLI98_14785 NZ_CP100601.1 Protein Homology CDS 3038973 3041645 . - 0 ID=cds-WP_004179474.1;Parent=gene-NLI98_RS14790;Dbxref=Genbank:WP_004179474.1;Name=WP_004179474.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226479.1;locus_tag=NLI98_RS14790;product=aconitate hydratase AcnA;protein_id=WP_004179474.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3042034 3042201 . - . ID=gene-NLI98_RS14795;Name=NLI98_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14795;old_locus_tag=NLI98_14790 NZ_CP100601.1 Protein Homology CDS 3042034 3042201 . - 0 ID=cds-WP_002901776.1;Parent=gene-NLI98_RS14795;Dbxref=Genbank:WP_002901776.1;Name=WP_002901776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226477.1;locus_tag=NLI98_RS14795;product=YmiA family putative membrane protein;protein_id=WP_002901776.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3042447 3043421 . - . ID=gene-NLI98_RS14800;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=NLI98_RS14800;old_locus_tag=NLI98_14795 NZ_CP100601.1 Protein Homology CDS 3042447 3043421 . - 0 ID=cds-WP_002901772.1;Parent=gene-NLI98_RS14800;Dbxref=Genbank:WP_002901772.1;Name=WP_002901772.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017585.1;locus_tag=NLI98_RS14800;product=HTH-type transcriptional regulator CysB;protein_id=WP_002901772.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3043767 3046364 . - . ID=gene-NLI98_RS14805;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=NLI98_RS14805;old_locus_tag=NLI98_14800 NZ_CP100601.1 Protein Homology CDS 3043767 3046364 . - 0 ID=cds-WP_002901763.1;Parent=gene-NLI98_RS14805;Dbxref=Genbank:WP_002901763.1;Name=WP_002901763.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000513601.1;locus_tag=NLI98_RS14805;product=type I DNA topoisomerase;protein_id=WP_002901763.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3046771 3047022 . + . ID=gene-NLI98_RS14810;Name=NLI98_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14810;old_locus_tag=NLI98_14805 NZ_CP100601.1 Protein Homology CDS 3046771 3047022 . + 0 ID=cds-WP_002901761.1;Parent=gene-NLI98_RS14810;Dbxref=Genbank:WP_002901761.1;Name=WP_002901761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226473.1;locus_tag=NLI98_RS14810;product=YciN family protein;protein_id=WP_002901761.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3047070 3048116 . - . ID=gene-NLI98_RS14815;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=NLI98_RS14815;old_locus_tag=NLI98_14810 NZ_CP100601.1 Protein Homology CDS 3047070 3048116 . - 0 ID=cds-WP_002901758.1;Parent=gene-NLI98_RS14815;Dbxref=Genbank:WP_002901758.1;Name=WP_002901758.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309871.1;locus_tag=NLI98_RS14815;product=protease SohB;protein_id=WP_002901758.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3048161 3048376 . - . ID=gene-NLI98_RS14820;Name=NLI98_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14820;old_locus_tag=NLI98_14815 NZ_CP100601.1 GeneMarkS-2+ CDS 3048161 3048376 . - 0 ID=cds-WP_004148112.1;Parent=gene-NLI98_RS14820;Dbxref=Genbank:WP_004148112.1;Name=WP_004148112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS14820;product=hypothetical protein;protein_id=WP_004148112.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3048371 3049132 . + . ID=gene-NLI98_RS14825;Name=NLI98_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14825;old_locus_tag=NLI98_14820 NZ_CP100601.1 Protein Homology CDS 3048371 3049132 . + 0 ID=cds-WP_004196459.1;Parent=gene-NLI98_RS14825;Dbxref=Genbank:WP_004196459.1;Name=WP_004196459.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226470.1;locus_tag=NLI98_RS14825;product=YciK family oxidoreductase;protein_id=WP_004196459.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3049129 3049719 . + . ID=gene-NLI98_RS14830;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=NLI98_RS14830;old_locus_tag=NLI98_14825 NZ_CP100601.1 Protein Homology CDS 3049129 3049719 . + 0 ID=cds-WP_002901749.1;Parent=gene-NLI98_RS14830;Dbxref=Genbank:WP_002901749.1;Name=WP_002901749.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226469.1;locus_tag=NLI98_RS14830;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_002901749.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3049780 3050682 . - . ID=gene-NLI98_RS14835;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=NLI98_RS14835;old_locus_tag=NLI98_14830 NZ_CP100601.1 Protein Homology CDS 3049780 3050682 . - 0 ID=cds-WP_002901746.1;Parent=gene-NLI98_RS14835;Dbxref=Genbank:WP_002901746.1;Name=WP_002901746.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226468.1;locus_tag=NLI98_RS14835;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_002901746.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3050964 3051860 . - . ID=gene-NLI98_RS14840;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=NLI98_RS14840;old_locus_tag=NLI98_14835 NZ_CP100601.1 Protein Homology CDS 3050964 3051860 . - 0 ID=cds-WP_020802466.1;Parent=gene-NLI98_RS14840;Dbxref=Genbank:WP_020802466.1;Name=WP_020802466.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=gcvA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226467.1;locus_tag=NLI98_RS14840;product=transcriptional regulator GcvA;protein_id=WP_020802466.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3051972 3052880 . + . ID=gene-NLI98_RS14845;Name=NLI98_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14845;old_locus_tag=NLI98_14840 NZ_CP100601.1 Protein Homology CDS 3051972 3052880 . + 0 ID=cds-WP_032419872.1;Parent=gene-NLI98_RS14845;Dbxref=Genbank:WP_032419872.1;Name=WP_032419872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226466.1;locus_tag=NLI98_RS14845;product=DMT family transporter;protein_id=WP_032419872.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3052902 3053522 . - . ID=gene-NLI98_RS14850;Name=NLI98_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14850;old_locus_tag=NLI98_14845 NZ_CP100601.1 Protein Homology CDS 3052902 3053522 . - 0 ID=cds-WP_002901738.1;Parent=gene-NLI98_RS14850;Dbxref=Genbank:WP_002901738.1;Name=WP_002901738.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126434.1;locus_tag=NLI98_RS14850;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_002901738.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3053539 3054402 . - . ID=gene-NLI98_RS14855;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=NLI98_RS14855;old_locus_tag=NLI98_14850 NZ_CP100601.1 Protein Homology CDS 3053539 3054402 . - 0 ID=cds-WP_002901735.1;Parent=gene-NLI98_RS14855;Dbxref=Genbank:WP_002901735.1;Name=WP_002901735.1;gbkey=CDS;gene=rnm;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226464.1;locus_tag=NLI98_RS14855;product=RNase AM;protein_id=WP_002901735.1;transl_table=11 NZ_CP100601.1 cmsearch sequence_feature 3054562 3054657 . + . ID=id-NZ_CP100601.1:3054562..3054657;Dbxref=RFAM:RF00513;Note=Trp leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP100601.1 RefSeq gene 3054691 3056253 . + . ID=gene-NLI98_RS14860;Name=NLI98_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14860;old_locus_tag=NLI98_14855 NZ_CP100601.1 Protein Homology CDS 3054691 3056253 . + 0 ID=cds-WP_004176488.1;Parent=gene-NLI98_RS14860;Dbxref=Genbank:WP_004176488.1;Name=WP_004176488.1;Ontology_term=GO:0009058,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226463.1;locus_tag=NLI98_RS14860;product=anthranilate synthase component 1;protein_id=WP_004176488.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3056253 3057848 . + . ID=gene-NLI98_RS14865;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=NLI98_RS14865;old_locus_tag=NLI98_14860 NZ_CP100601.1 Protein Homology CDS 3056253 3057848 . + 0 ID=cds-WP_088498400.1;Parent=gene-NLI98_RS14865;Dbxref=Genbank:WP_088498400.1;Name=WP_088498400.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008784940.1;locus_tag=NLI98_RS14865;product=bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD;protein_id=WP_088498400.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3057852 3059210 . + . ID=gene-NLI98_RS14870;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=NLI98_RS14870;old_locus_tag=NLI98_14865 NZ_CP100601.1 Protein Homology CDS 3057852 3059210 . + 0 ID=cds-WP_040223502.1;Parent=gene-NLI98_RS14870;Dbxref=Genbank:WP_040223502.1;Name=WP_040223502.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226461.1;locus_tag=NLI98_RS14870;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_040223502.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3059220 3060413 . + . ID=gene-NLI98_RS14875;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=NLI98_RS14875;old_locus_tag=NLI98_14870 NZ_CP100601.1 Protein Homology CDS 3059220 3060413 . + 0 ID=cds-WP_004148107.1;Parent=gene-NLI98_RS14875;Dbxref=Genbank:WP_004148107.1;Name=WP_004148107.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226460.1;locus_tag=NLI98_RS14875;product=tryptophan synthase subunit beta;protein_id=WP_004148107.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3060413 3061222 . + . ID=gene-NLI98_RS14880;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=NLI98_RS14880;old_locus_tag=NLI98_14875 NZ_CP100601.1 Protein Homology CDS 3060413 3061222 . + 0 ID=cds-WP_088498399.1;Parent=gene-NLI98_RS14880;Dbxref=Genbank:WP_088498399.1;Name=WP_088498399.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226459.1;locus_tag=NLI98_RS14880;product=tryptophan synthase subunit alpha;protein_id=WP_088498399.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3061441 3062697 . - . ID=gene-NLI98_RS14885;Name=NLI98_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14885;old_locus_tag=NLI98_14880 NZ_CP100601.1 Protein Homology CDS 3061441 3062697 . - 0 ID=cds-WP_088498398.1;Parent=gene-NLI98_RS14885;Dbxref=Genbank:WP_088498398.1;Name=WP_088498398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226458.1;locus_tag=NLI98_RS14885;product=glycerate kinase;protein_id=WP_088498398.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3062700 3063788 . - . ID=gene-NLI98_RS14890;Name=NLI98_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14890;old_locus_tag=NLI98_14885 NZ_CP100601.1 Protein Homology CDS 3062700 3063788 . - 0 ID=cds-WP_002901724.1;Parent=gene-NLI98_RS14890;Dbxref=Genbank:WP_002901724.1;Name=WP_002901724.1;Ontology_term=GO:0046395,GO:0009027;gbkey=CDS;go_function=tartrate dehydrogenase activity|0009027||IEA;go_process=carboxylic acid catabolic process|0046395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226457.1;locus_tag=NLI98_RS14890;product=tartrate dehydrogenase;protein_id=WP_002901724.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3063803 3065113 . - . ID=gene-NLI98_RS14895;Name=NLI98_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14895;old_locus_tag=NLI98_14890 NZ_CP100601.1 Protein Homology CDS 3063803 3065113 . - 0 ID=cds-WP_088498397.1;Parent=gene-NLI98_RS14895;Dbxref=Genbank:WP_088498397.1;Name=WP_088498397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226456.1;locus_tag=NLI98_RS14895;product=MFS transporter;protein_id=WP_088498397.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3065242 3066150 . + . ID=gene-NLI98_RS14900;Name=NLI98_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14900;old_locus_tag=NLI98_14895 NZ_CP100601.1 Protein Homology CDS 3065242 3066150 . + 0 ID=cds-WP_088498396.1;Parent=gene-NLI98_RS14900;Dbxref=Genbank:WP_088498396.1;Name=WP_088498396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226455.1;locus_tag=NLI98_RS14900;product=LysR family transcriptional regulator;protein_id=WP_088498396.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3066193 3066651 . - . ID=gene-NLI98_RS14905;Name=NLI98_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14905;old_locus_tag=NLI98_14900 NZ_CP100601.1 Protein Homology CDS 3066193 3066651 . - 0 ID=cds-WP_016529823.1;Parent=gene-NLI98_RS14905;Dbxref=Genbank:WP_016529823.1;Name=WP_016529823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226454.1;locus_tag=NLI98_RS14905;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_016529823.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3066726 3067673 . + . ID=gene-NLI98_RS14910;Name=NLI98_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14910;old_locus_tag=NLI98_14905 NZ_CP100601.1 Protein Homology CDS 3066726 3067673 . + 0 ID=cds-WP_088498395.1;Parent=gene-NLI98_RS14910;Dbxref=Genbank:WP_088498395.1;Name=WP_088498395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226453.1;locus_tag=NLI98_RS14910;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_088498395.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3067782 3067982 . - . ID=gene-NLI98_RS14915;Name=NLI98_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14915;old_locus_tag=NLI98_14910 NZ_CP100601.1 GeneMarkS-2+ CDS 3067782 3067982 . - 0 ID=cds-WP_004151911.1;Parent=gene-NLI98_RS14915;Dbxref=Genbank:WP_004151911.1;Name=WP_004151911.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS14915;product=hypothetical protein;protein_id=WP_004151911.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3068101 3068808 . + . ID=gene-NLI98_RS14920;Name=NLI98_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14920;old_locus_tag=NLI98_14915 NZ_CP100601.1 Protein Homology CDS 3068101 3068808 . + 0 ID=cds-WP_004183694.1;Parent=gene-NLI98_RS14920;Dbxref=Genbank:WP_004183694.1;Name=WP_004183694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226451.1;locus_tag=NLI98_RS14920;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_004183694.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3069118 3071403 . + . ID=gene-NLI98_RS14925;Name=NLI98_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14925;old_locus_tag=NLI98_14920 NZ_CP100601.1 Protein Homology CDS 3069118 3071403 . + 0 ID=cds-WP_004176501.1;Parent=gene-NLI98_RS14925;Dbxref=Genbank:WP_004176501.1;Name=WP_004176501.1;Ontology_term=GO:0015891,GO:0015344;gbkey=CDS;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415326.1;locus_tag=NLI98_RS14925;product=catecholate siderophore receptor Fiu;protein_id=WP_004176501.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3071452 3072129 . + . ID=gene-NLI98_RS14930;Name=ybiX;gbkey=Gene;gene=ybiX;gene_biotype=protein_coding;locus_tag=NLI98_RS14930;old_locus_tag=NLI98_14925 NZ_CP100601.1 Protein Homology CDS 3071452 3072129 . + 0 ID=cds-WP_088498394.1;Parent=gene-NLI98_RS14930;Dbxref=Genbank:WP_088498394.1;Name=WP_088498394.1;gbkey=CDS;gene=ybiX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226449.1;locus_tag=NLI98_RS14930;product=PKHD-type hydroxylase YbiX;protein_id=WP_088498394.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3072214 3072852 . - . ID=gene-NLI98_RS14935;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=NLI98_RS14935;old_locus_tag=NLI98_14930 NZ_CP100601.1 Protein Homology CDS 3072214 3072852 . - 0 ID=cds-WP_002901634.1;Parent=gene-NLI98_RS14935;Dbxref=Genbank:WP_002901634.1;Name=WP_002901634.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309783.1;locus_tag=NLI98_RS14935;product=outer membrane protein OmpW;protein_id=WP_002901634.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3073122 3073535 . + . ID=gene-NLI98_RS14940;Name=NLI98_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14940;old_locus_tag=NLI98_14935 NZ_CP100601.1 Protein Homology CDS 3073122 3073535 . + 0 ID=cds-WP_002901633.1;Parent=gene-NLI98_RS14940;Dbxref=Genbank:WP_002901633.1;Name=WP_002901633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016947402.1;locus_tag=NLI98_RS14940;product=YkgJ family cysteine cluster protein;protein_id=WP_002901633.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3073561 3074304 . + . ID=gene-NLI98_RS14945;Name=NLI98_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14945;old_locus_tag=NLI98_14940 NZ_CP100601.1 Protein Homology CDS 3073561 3074304 . + 0 ID=cds-WP_002901632.1;Parent=gene-NLI98_RS14945;Dbxref=Genbank:WP_002901632.1;Name=WP_002901632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226446.1;locus_tag=NLI98_RS14945;product=YciC family protein;protein_id=WP_002901632.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3074359 3074898 . + . ID=gene-NLI98_RS14950;Name=NLI98_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14950;old_locus_tag=NLI98_14945 NZ_CP100601.1 Protein Homology CDS 3074359 3074898 . + 0 ID=cds-WP_069339473.1;Parent=gene-NLI98_RS14950;Dbxref=Genbank:WP_069339473.1;Name=WP_069339473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226445.1;locus_tag=NLI98_RS14950;product=septation protein A;protein_id=WP_069339473.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3075170 3077353 . + . ID=gene-NLI98_RS14955;Name=NLI98_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14955;old_locus_tag=NLI98_14950 NZ_CP100601.1 Protein Homology CDS 3075170 3077353 . + 0 ID=cds-WP_004179434.1;Parent=gene-NLI98_RS14955;Dbxref=Genbank:WP_004179434.1;Name=WP_004179434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001222186.1;locus_tag=NLI98_RS14955;product=TonB-dependent siderophore receptor;protein_id=WP_004179434.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3077453 3077851 . + . ID=gene-NLI98_RS14960;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=NLI98_RS14960;old_locus_tag=NLI98_14955 NZ_CP100601.1 Protein Homology CDS 3077453 3077851 . + 0 ID=cds-WP_002901629.1;Parent=gene-NLI98_RS14960;Dbxref=Genbank:WP_002901629.1;Name=WP_002901629.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017898669.1;locus_tag=NLI98_RS14960;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_002901629.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3077881 3078417 . - . ID=gene-NLI98_RS14965;Name=NLI98_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14965;old_locus_tag=NLI98_14960 NZ_CP100601.1 Protein Homology CDS 3077881 3078417 . - 0 ID=cds-WP_002901627.1;Parent=gene-NLI98_RS14965;Dbxref=Genbank:WP_002901627.1;Name=WP_002901627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226442.1;locus_tag=NLI98_RS14965;product=YniB family protein;protein_id=WP_002901627.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3078606 3079274 . + . ID=gene-NLI98_RS14970;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=NLI98_RS14970;old_locus_tag=NLI98_14965 NZ_CP100601.1 Protein Homology CDS 3078606 3079274 . + 0 ID=cds-WP_004140335.1;Parent=gene-NLI98_RS14970;Dbxref=Genbank:WP_004140335.1;Name=WP_004140335.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226441.1;locus_tag=NLI98_RS14970;product=hexitol phosphatase HxpB;protein_id=WP_004140335.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3079424 3080185 . + . ID=gene-NLI98_RS14975;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=NLI98_RS14975;old_locus_tag=NLI98_14970 NZ_CP100601.1 Protein Homology CDS 3079424 3080185 . + 0 ID=cds-WP_004176511.1;Parent=gene-NLI98_RS14975;Dbxref=Genbank:WP_004176511.1;Name=WP_004176511.1;Ontology_term=GO:0000272,GO:0008678,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=2-deoxy-D-gluconate 3-dehydrogenase activity|0008678||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226440.1;locus_tag=NLI98_RS14975;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_004176511.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3080277 3080867 . + . ID=gene-NLI98_RS14980;Name=NLI98_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14980;old_locus_tag=NLI98_14975 NZ_CP100601.1 Protein Homology CDS 3080277 3080867 . + 0 ID=cds-WP_002901611.1;Parent=gene-NLI98_RS14980;Dbxref=Genbank:WP_002901611.1;Name=WP_002901611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226439.1;locus_tag=NLI98_RS14980;product=metal-dependent hydrolase;protein_id=WP_002901611.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3081003 3082394 . + . ID=gene-NLI98_RS14985;Name=NLI98_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS14985;old_locus_tag=NLI98_14980 NZ_CP100601.1 Protein Homology CDS 3081003 3082394 . + 0 ID=cds-WP_087748908.1;Parent=gene-NLI98_RS14985;Dbxref=Genbank:WP_087748908.1;Name=WP_087748908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120792.1;locus_tag=NLI98_RS14985;product=L-cystine transporter;protein_id=WP_087748908.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3082454 3082708 . - . ID=gene-NLI98_RS14990;Name=cedA;gbkey=Gene;gene=cedA;gene_biotype=protein_coding;locus_tag=NLI98_RS14990;old_locus_tag=NLI98_14985 NZ_CP100601.1 Protein Homology CDS 3082454 3082708 . - 0 ID=cds-WP_008807754.1;Parent=gene-NLI98_RS14990;Dbxref=Genbank:WP_008807754.1;Name=WP_008807754.1;gbkey=CDS;gene=cedA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001241549.1;locus_tag=NLI98_RS14990;product=cell division activator CedA;protein_id=WP_008807754.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3082899 3085157 . + . ID=gene-NLI98_RS14995;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=NLI98_RS14995;old_locus_tag=NLI98_14990 NZ_CP100601.1 Protein Homology CDS 3082899 3085157 . + 0 ID=cds-WP_088498393.1;Parent=gene-NLI98_RS14995;Dbxref=Genbank:WP_088498393.1;Name=WP_088498393.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226436.1;locus_tag=NLI98_RS14995;product=catalase HPII;protein_id=WP_088498393.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3085215 3085973 . - . ID=gene-NLI98_RS15000;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=NLI98_RS15000;old_locus_tag=NLI98_14995 NZ_CP100601.1 Protein Homology CDS 3085215 3085973 . - 0 ID=cds-WP_048270592.1;Parent=gene-NLI98_RS15000;Dbxref=Genbank:WP_048270592.1;Name=WP_048270592.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226435.1;locus_tag=NLI98_RS15000;product=chitin disaccharide deacetylase;protein_id=WP_048270592.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3085986 3087332 . - . ID=gene-NLI98_RS15005;Name=NLI98_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15005;old_locus_tag=NLI98_15000 NZ_CP100601.1 Protein Homology CDS 3085986 3087332 . - 0 ID=cds-WP_088498392.1;Parent=gene-NLI98_RS15005;Dbxref=Genbank:WP_088498392.1;Name=WP_088498392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226434.1;locus_tag=NLI98_RS15005;product=6-phospho-beta-glucosidase;protein_id=WP_088498392.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3087443 3088267 . - . ID=gene-NLI98_RS15010;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=NLI98_RS15010;old_locus_tag=NLI98_15005 NZ_CP100601.1 Protein Homology CDS 3087443 3088267 . - 0 ID=cds-WP_002901552.1;Parent=gene-NLI98_RS15010;Dbxref=Genbank:WP_002901552.1;Name=WP_002901552.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226433.1;locus_tag=NLI98_RS15010;product=transcriptional regulator ChbR;protein_id=WP_002901552.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3088295 3088642 . - . ID=gene-NLI98_RS15015;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=NLI98_RS15015;old_locus_tag=NLI98_15010 NZ_CP100601.1 Protein Homology CDS 3088295 3088642 . - 0 ID=cds-WP_060175729.1;Parent=gene-NLI98_RS15015;Dbxref=Genbank:WP_060175729.1;Name=WP_060175729.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226432.1;locus_tag=NLI98_RS15015;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_060175729.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3088696 3090054 . - . ID=gene-NLI98_RS15020;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=NLI98_RS15020;old_locus_tag=NLI98_15015 NZ_CP100601.1 Protein Homology CDS 3088696 3090054 . - 0 ID=cds-WP_004148091.1;Parent=gene-NLI98_RS15020;Dbxref=Genbank:WP_004148091.1;Name=WP_004148091.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460279.1;locus_tag=NLI98_RS15020;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_004148091.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3090066 3090182 . - . ID=gene-NLI98_RS15025;Name=NLI98_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15025;old_locus_tag=NLI98_15020 NZ_CP100601.1 Protein Homology CDS 3090066 3090182 . - 0 ID=cds-WP_014907779.1;Parent=gene-NLI98_RS15025;Dbxref=Genbank:WP_014907779.1;Name=WP_014907779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226429.1;locus_tag=NLI98_RS15025;product=hypothetical protein;protein_id=WP_014907779.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3090202 3090522 . - . ID=gene-NLI98_RS15030;Name=chbB;gbkey=Gene;gene=chbB;gene_biotype=protein_coding;locus_tag=NLI98_RS15030;old_locus_tag=NLI98_15025 NZ_CP100601.1 Protein Homology CDS 3090202 3090522 . - 0 ID=cds-WP_002901547.1;Parent=gene-NLI98_RS15030;Dbxref=Genbank:WP_002901547.1;Name=WP_002901547.1;gbkey=CDS;gene=chbB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226428.1;locus_tag=NLI98_RS15030;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIB;protein_id=WP_002901547.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3090801 3091139 . - . ID=gene-NLI98_RS15035;Name=osmE;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=NLI98_RS15035;old_locus_tag=NLI98_15030 NZ_CP100601.1 Protein Homology CDS 3090801 3091139 . - 0 ID=cds-WP_002901544.1;Parent=gene-NLI98_RS15035;Dbxref=Genbank:WP_002901544.1;Name=WP_002901544.1;Ontology_term=GO:0019867;gbkey=CDS;gene=osmE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226427.1;locus_tag=NLI98_RS15035;product=osmotically-inducible lipoprotein OsmE;protein_id=WP_002901544.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3091422 3092249 . + . ID=gene-NLI98_RS15040;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=NLI98_RS15040;old_locus_tag=NLI98_15035 NZ_CP100601.1 Protein Homology CDS 3091422 3092249 . + 0 ID=cds-WP_004151921.1;Parent=gene-NLI98_RS15040;Dbxref=Genbank:WP_004151921.1;Name=WP_004151921.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226426.1;locus_tag=NLI98_RS15040;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_004151921.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3092350 3093213 . + . ID=gene-NLI98_RS15045;Name=cho;gbkey=Gene;gene=cho;gene_biotype=protein_coding;locus_tag=NLI98_RS15045;old_locus_tag=NLI98_15040 NZ_CP100601.1 Protein Homology CDS 3092350 3093213 . + 0 ID=cds-WP_004176514.1;Parent=gene-NLI98_RS15045;Dbxref=Genbank:WP_004176514.1;Name=WP_004176514.1;gbkey=CDS;gene=cho;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226425.1;locus_tag=NLI98_RS15045;product=excinuclease Cho;protein_id=WP_004176514.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3093301 3093786 . - . ID=gene-NLI98_RS15050;Name=spy;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=NLI98_RS15050;old_locus_tag=NLI98_15045 NZ_CP100601.1 Protein Homology CDS 3093301 3093786 . - 0 ID=cds-WP_020323768.1;Parent=gene-NLI98_RS15050;Dbxref=Genbank:WP_020323768.1;Name=WP_020323768.1;Ontology_term=GO:0042597;gbkey=CDS;gene=spy;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226424.1;locus_tag=NLI98_RS15050;product=ATP-independent periplasmic protein-refolding chaperone Spy;protein_id=WP_020323768.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3094130 3095095 . - . ID=gene-NLI98_RS15055;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=NLI98_RS15055;old_locus_tag=NLI98_15050 NZ_CP100601.1 Protein Homology CDS 3094130 3095095 . - 0 ID=cds-WP_004224242.1;Parent=gene-NLI98_RS15055;Dbxref=Genbank:WP_004224242.1;Name=WP_004224242.1;Ontology_term=GO:0006527,GO:0009017;gbkey=CDS;gene=astE;go_function=succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226422.1;locus_tag=NLI98_RS15055;product=succinylglutamate desuccinylase;protein_id=WP_004224242.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3095105 3096430 . - . ID=gene-NLI98_RS15060;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=NLI98_RS15060;old_locus_tag=NLI98_15055 NZ_CP100601.1 Protein Homology CDS 3095105 3096430 . - 0 ID=cds-WP_088498391.1;Parent=gene-NLI98_RS15060;Dbxref=Genbank:WP_088498391.1;Name=WP_088498391.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226421.1;locus_tag=NLI98_RS15060;product=N-succinylarginine dihydrolase;protein_id=WP_088498391.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3096427 3097905 . - . ID=gene-NLI98_RS15065;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=NLI98_RS15065;old_locus_tag=NLI98_15060 NZ_CP100601.1 Protein Homology CDS 3096427 3097905 . - 0 ID=cds-WP_004209911.1;Parent=gene-NLI98_RS15065;Dbxref=Genbank:WP_004209911.1;Name=WP_004209911.1;Ontology_term=GO:0006527,GO:0016620;gbkey=CDS;gene=astD;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226420.1;locus_tag=NLI98_RS15065;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_004209911.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3097902 3098936 . - . ID=gene-NLI98_RS15070;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=NLI98_RS15070;old_locus_tag=NLI98_15065 NZ_CP100601.1 Protein Homology CDS 3097902 3098936 . - 0 ID=cds-WP_004179410.1;Parent=gene-NLI98_RS15070;Dbxref=Genbank:WP_004179410.1;Name=WP_004179410.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226419.1;locus_tag=NLI98_RS15070;product=arginine N-succinyltransferase;protein_id=WP_004179410.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3098933 3100153 . - . ID=gene-NLI98_RS15075;Name=NLI98_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15075;old_locus_tag=NLI98_15070 NZ_CP100601.1 Protein Homology CDS 3098933 3100153 . - 0 ID=cds-WP_002901489.1;Parent=gene-NLI98_RS15075;Dbxref=Genbank:WP_002901489.1;Name=WP_002901489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226418.1;locus_tag=NLI98_RS15075;product=aspartate aminotransferase family protein;protein_id=WP_002901489.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3100592 3101398 . + . ID=gene-NLI98_RS15080;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=NLI98_RS15080;old_locus_tag=NLI98_15075 NZ_CP100601.1 Protein Homology CDS 3100592 3101398 . + 0 ID=cds-WP_002901486.1;Parent=gene-NLI98_RS15080;Dbxref=Genbank:WP_002901486.1;Name=WP_002901486.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008853;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804554.1;locus_tag=NLI98_RS15080;product=exodeoxyribonuclease III;protein_id=WP_002901486.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3101612 3102268 . + . ID=gene-NLI98_RS15085;Name=NLI98_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15085;old_locus_tag=NLI98_15080 NZ_CP100601.1 Protein Homology CDS 3101612 3102268 . + 0 ID=cds-WP_025380799.1;Parent=gene-NLI98_RS15085;Dbxref=Genbank:WP_025380799.1;Name=WP_025380799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004140389.1;locus_tag=NLI98_RS15085;product=TVP38/TMEM64 family protein;protein_id=WP_025380799.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3102255 3102965 . + . ID=gene-NLI98_RS15090;Name=NLI98_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15090;old_locus_tag=NLI98_15085 NZ_CP100601.1 Protein Homology CDS 3102255 3102965 . + 0 ID=cds-WP_060175725.1;Parent=gene-NLI98_RS15090;Dbxref=Genbank:WP_060175725.1;Name=WP_060175725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226414.1;locus_tag=NLI98_RS15090;product=TVP38/TMEM64 family protein;protein_id=WP_060175725.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3102962 3103522 . + . ID=gene-NLI98_RS15095;Name=NLI98_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15095;old_locus_tag=NLI98_15090 NZ_CP100601.1 Protein Homology CDS 3102962 3103522 . + 0 ID=cds-WP_004176519.1;Parent=gene-NLI98_RS15095;Dbxref=Genbank:WP_004176519.1;Name=WP_004176519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226413.1;locus_tag=NLI98_RS15095;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_004176519.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3103525 3104703 . + . ID=gene-NLI98_RS15100;Name=NLI98_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15100;old_locus_tag=NLI98_15095 NZ_CP100601.1 Protein Homology CDS 3103525 3104703 . + 0 ID=cds-WP_050885462.1;Parent=gene-NLI98_RS15100;Dbxref=Genbank:WP_050885462.1;Name=WP_050885462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226412.1;locus_tag=NLI98_RS15100;product=ABC transporter substrate-binding protein;protein_id=WP_050885462.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3104676 3106211 . + . ID=gene-NLI98_RS15105;Name=NLI98_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15105;old_locus_tag=NLI98_15100 NZ_CP100601.1 Protein Homology CDS 3104676 3106211 . + 0 ID=cds-WP_023282376.1;Parent=gene-NLI98_RS15105;Dbxref=Genbank:WP_023282376.1;Name=WP_023282376.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226411.1;locus_tag=NLI98_RS15105;product=ABC transporter permease subunit;protein_id=WP_023282376.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3106211 3106843 . + . ID=gene-NLI98_RS15110;Name=NLI98_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15110;old_locus_tag=NLI98_15105 NZ_CP100601.1 Protein Homology CDS 3106211 3106843 . + 0 ID=cds-WP_004176522.1;Parent=gene-NLI98_RS15110;Dbxref=Genbank:WP_004176522.1;Name=WP_004176522.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226410.1;locus_tag=NLI98_RS15110;product=ATP-binding cassette domain-containing protein;protein_id=WP_004176522.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3106937 3108244 . + . ID=gene-NLI98_RS15115;Name=NLI98_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15115;old_locus_tag=NLI98_15110 NZ_CP100601.1 Protein Homology CDS 3106937 3108244 . + 0 ID=cds-WP_048265419.1;Parent=gene-NLI98_RS15115;Dbxref=Genbank:WP_048265419.1;Name=WP_048265419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226409.1;locus_tag=NLI98_RS15115;product=sulfurtransferase;protein_id=WP_048265419.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3108296 3108919 . - . ID=gene-NLI98_RS15120;Name=NLI98_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15120;old_locus_tag=NLI98_15115 NZ_CP100601.1 Protein Homology CDS 3108296 3108919 . - 0 ID=cds-WP_002901398.1;Parent=gene-NLI98_RS15120;Dbxref=Genbank:WP_002901398.1;Name=WP_002901398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226408.1;locus_tag=NLI98_RS15120;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_002901398.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3109006 3109416 . + . ID=gene-NLI98_RS15125;Name=NLI98_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15125;old_locus_tag=NLI98_15120 NZ_CP100601.1 Protein Homology CDS 3109006 3109416 . + 0 ID=cds-WP_023279119.1;Parent=gene-NLI98_RS15125;Dbxref=Genbank:WP_023279119.1;Name=WP_023279119.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226407.1;locus_tag=NLI98_RS15125;product=pyrimidine (deoxy)nucleoside triphosphate diphosphatase;protein_id=WP_023279119.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3109599 3110942 . + . ID=gene-NLI98_RS15130;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=NLI98_RS15130;old_locus_tag=NLI98_15125 NZ_CP100601.1 Protein Homology CDS 3109599 3110942 . + 0 ID=cds-WP_004176526.1;Parent=gene-NLI98_RS15130;Dbxref=Genbank:WP_004176526.1;Name=WP_004176526.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226405.1;locus_tag=NLI98_RS15130;product=NADP-specific glutamate dehydrogenase;protein_id=WP_004176526.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3110986 3111966 . - . ID=gene-NLI98_RS15135;Name=NLI98_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15135;old_locus_tag=NLI98_15130 NZ_CP100601.1 Protein Homology CDS 3110986 3111966 . - 0 ID=cds-WP_088498390.1;Parent=gene-NLI98_RS15135;Dbxref=Genbank:WP_088498390.1;Name=WP_088498390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226404.1;locus_tag=NLI98_RS15135;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_088498390.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3112146 3114092 . - . ID=gene-NLI98_RS15140;Name=NLI98_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15140;old_locus_tag=NLI98_15135 NZ_CP100601.1 Protein Homology CDS 3112146 3114092 . - 0 ID=cds-WP_004148065.1;Parent=gene-NLI98_RS15140;Dbxref=Genbank:WP_004148065.1;Name=WP_004148065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002901390.1;locus_tag=NLI98_RS15140;product=DNA topoisomerase III;protein_id=WP_004148065.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3114097 3115140 . - . ID=gene-NLI98_RS15145;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=NLI98_RS15145;old_locus_tag=NLI98_15140 NZ_CP100601.1 Protein Homology CDS 3114097 3115140 . - 0 ID=cds-WP_048999924.1;Parent=gene-NLI98_RS15145;Dbxref=Genbank:WP_048999924.1;Name=WP_048999924.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226401.1;locus_tag=NLI98_RS15145;product=selenide%2C water dikinase SelD;protein_id=WP_048999924.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3115366 3116112 . + . ID=gene-NLI98_RS15150;Name=NLI98_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15150;old_locus_tag=NLI98_15145 NZ_CP100601.1 Protein Homology CDS 3115366 3116112 . + 0 ID=cds-WP_002901387.1;Parent=gene-NLI98_RS15150;Dbxref=Genbank:WP_002901387.1;Name=WP_002901387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226400.1;locus_tag=NLI98_RS15150;product=phosphatase PAP2 family protein;protein_id=WP_002901387.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3116848 3117399 . - . ID=gene-NLI98_RS15155;Name=NLI98_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15155;old_locus_tag=NLI98_15150 NZ_CP100601.1 Protein Homology CDS 3116848 3117399 . - 0 ID=cds-WP_004176531.1;Parent=gene-NLI98_RS15155;Dbxref=Genbank:WP_004176531.1;Name=WP_004176531.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226397.1;locus_tag=NLI98_RS15155;product=NAD(P)H nitroreductase;protein_id=WP_004176531.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3117565 3119418 . + . ID=gene-NLI98_RS15160;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=NLI98_RS15160;old_locus_tag=NLI98_15155 NZ_CP100601.1 Protein Homology CDS 3117565 3119418 . + 0 ID=cds-WP_004140411.1;Parent=gene-NLI98_RS15160;Dbxref=Genbank:WP_004140411.1;Name=WP_004140411.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226396.1;locus_tag=NLI98_RS15160;product=signal peptide peptidase SppA;protein_id=WP_004140411.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3119557 3120576 . + . ID=gene-NLI98_RS15165;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=NLI98_RS15165;old_locus_tag=NLI98_15160 NZ_CP100601.1 Protein Homology CDS 3119557 3120576 . + 0 ID=cds-WP_049000126.1;Parent=gene-NLI98_RS15165;Dbxref=Genbank:WP_049000126.1;Name=WP_049000126.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226395.1;locus_tag=NLI98_RS15165;product=asparaginase;protein_id=WP_049000126.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3120586 3121227 . + . ID=gene-NLI98_RS15170;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=NLI98_RS15170;old_locus_tag=NLI98_15165 NZ_CP100601.1 Protein Homology CDS 3120586 3121227 . + 0 ID=cds-WP_004224206.1;Parent=gene-NLI98_RS15170;Dbxref=Genbank:WP_004224206.1;Name=WP_004224206.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226394.1;locus_tag=NLI98_RS15170;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_004224206.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3121397 3122650 . + . ID=gene-NLI98_RS15175;Name=NLI98_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15175;old_locus_tag=NLI98_15170 NZ_CP100601.1 Protein Homology CDS 3121397 3122650 . + 0 ID=cds-WP_002901255.1;Parent=gene-NLI98_RS15175;Dbxref=Genbank:WP_002901255.1;Name=WP_002901255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226384.1;locus_tag=NLI98_RS15175;product=glycoside hydrolase family 18 protein;protein_id=WP_002901255.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3122811 3123155 . + . ID=gene-NLI98_RS15180;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=NLI98_RS15180;old_locus_tag=NLI98_15175 NZ_CP100601.1 Protein Homology CDS 3122811 3123155 . + 0 ID=cds-WP_002901254.1;Parent=gene-NLI98_RS15180;Dbxref=Genbank:WP_002901254.1;Name=WP_002901254.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226383.1;locus_tag=NLI98_RS15180;product=HNH nuclease YajD;protein_id=WP_002901254.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3123250 3123528 . - . ID=gene-NLI98_RS15185;Name=NLI98_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15185;old_locus_tag=NLI98_15180 NZ_CP100601.1 Protein Homology CDS 3123250 3123528 . - 0 ID=cds-WP_002901249.1;Parent=gene-NLI98_RS15185;Dbxref=Genbank:WP_002901249.1;Name=WP_002901249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226382.1;locus_tag=NLI98_RS15185;product=YeaC family protein;protein_id=WP_002901249.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3123572 3123985 . - . ID=gene-NLI98_RS15190;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=NLI98_RS15190;old_locus_tag=NLI98_15185 NZ_CP100601.1 Protein Homology CDS 3123572 3123985 . - 0 ID=cds-WP_002901246.1;Parent=gene-NLI98_RS15190;Dbxref=Genbank:WP_002901246.1;Name=WP_002901246.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226381.1;locus_tag=NLI98_RS15190;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_002901246.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3124324 3125319 . + . ID=gene-NLI98_RS15195;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=NLI98_RS15195;old_locus_tag=NLI98_15190 NZ_CP100601.1 Protein Homology CDS 3124324 3125319 . + 0 ID=cds-WP_002901243.1;Parent=gene-NLI98_RS15195;Dbxref=Genbank:WP_002901243.1;Name=WP_002901243.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322611.1;locus_tag=NLI98_RS15195;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_002901243.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3125394 3126278 . + . ID=gene-NLI98_RS15200;Name=NLI98_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15200;old_locus_tag=NLI98_15195 NZ_CP100601.1 Protein Homology CDS 3125394 3126278 . + 0 ID=cds-WP_002901240.1;Parent=gene-NLI98_RS15200;Dbxref=Genbank:WP_002901240.1;Name=WP_002901240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226379.1;locus_tag=NLI98_RS15200;product=D-hexose-6-phosphate mutarotase;protein_id=WP_002901240.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3126335 3127189 . - . ID=gene-NLI98_RS15205;Name=NLI98_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15205;old_locus_tag=NLI98_15200 NZ_CP100601.1 Protein Homology CDS 3126335 3127189 . - 0 ID=cds-WP_064177326.1;Parent=gene-NLI98_RS15205;Dbxref=Genbank:WP_064177326.1;Name=WP_064177326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014599128.1;locus_tag=NLI98_RS15205;product=aldo/keto reductase;protein_id=WP_064177326.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3127281 3128027 . - . ID=gene-NLI98_RS15210;Name=NLI98_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15210;old_locus_tag=NLI98_15205 NZ_CP100601.1 Protein Homology CDS 3127281 3128027 . - 0 ID=cds-WP_002901236.1;Parent=gene-NLI98_RS15210;Dbxref=Genbank:WP_002901236.1;Name=WP_002901236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226377.1;locus_tag=NLI98_RS15210;product=MipA/OmpV family protein;protein_id=WP_002901236.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3128444 3130378 . + . ID=gene-NLI98_RS15215;Name=yeaG;gbkey=Gene;gene=yeaG;gene_biotype=protein_coding;locus_tag=NLI98_RS15215;old_locus_tag=NLI98_15210 NZ_CP100601.1 Protein Homology CDS 3128444 3130378 . + 0 ID=cds-WP_002901234.1;Parent=gene-NLI98_RS15215;Dbxref=Genbank:WP_002901234.1;Name=WP_002901234.1;gbkey=CDS;gene=yeaG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226376.1;locus_tag=NLI98_RS15215;product=protein kinase YeaG;protein_id=WP_002901234.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3130464 3131747 . + . ID=gene-NLI98_RS15220;Name=NLI98_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15220;old_locus_tag=NLI98_15215 NZ_CP100601.1 Protein Homology CDS 3130464 3131747 . + 0 ID=cds-WP_004152363.1;Parent=gene-NLI98_RS15220;Dbxref=Genbank:WP_004152363.1;Name=WP_004152363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226375.1;locus_tag=NLI98_RS15220;product=YeaH/YhbH family protein;protein_id=WP_004152363.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3131793 3132356 . - . ID=gene-NLI98_RS15225;Name=NLI98_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15225;old_locus_tag=NLI98_15220 NZ_CP100601.1 Protein Homology CDS 3131793 3132356 . - 0 ID=cds-WP_032439871.1;Parent=gene-NLI98_RS15225;Dbxref=Genbank:WP_032439871.1;Name=WP_032439871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226374.1;locus_tag=NLI98_RS15225;product=hypothetical protein;protein_id=WP_032439871.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3132515 3132997 . + . ID=gene-NLI98_RS15230;Name=NLI98_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15230;old_locus_tag=NLI98_15225 NZ_CP100601.1 Protein Homology CDS 3132515 3132997 . + 0 ID=cds-WP_002901230.1;Parent=gene-NLI98_RS15230;Dbxref=Genbank:WP_002901230.1;Name=WP_002901230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226373.1;locus_tag=NLI98_RS15230;product=glutathione peroxidase;protein_id=WP_002901230.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3133119 3133430 . - . ID=gene-NLI98_RS15235;Name=NLI98_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15235;old_locus_tag=NLI98_15230 NZ_CP100601.1 Protein Homology CDS 3133119 3133430 . - 0 ID=cds-WP_032439870.1;Parent=gene-NLI98_RS15235;Dbxref=Genbank:WP_032439870.1;Name=WP_032439870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226372.1;locus_tag=NLI98_RS15235;product=hypothetical protein;protein_id=WP_032439870.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3133498 3133617 . + . ID=gene-NLI98_RS15240;Name=NLI98_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15240;old_locus_tag=NLI98_15235 NZ_CP100601.1 Protein Homology CDS 3133498 3133617 . + 0 ID=cds-WP_014907792.1;Parent=gene-NLI98_RS15240;Dbxref=Genbank:WP_014907792.1;Name=WP_014907792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226371.1;locus_tag=NLI98_RS15240;product=hypothetical protein;protein_id=WP_014907792.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3133688 3134569 . - . ID=gene-NLI98_RS15245;Name=NLI98_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15245;old_locus_tag=NLI98_15240 NZ_CP100601.1 Protein Homology CDS 3133688 3134569 . - 0 ID=cds-WP_009309126.1;Parent=gene-NLI98_RS15245;Dbxref=Genbank:WP_009309126.1;Name=WP_009309126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226370.1;locus_tag=NLI98_RS15245;product=LysR family transcriptional regulator;protein_id=WP_009309126.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3134745 3135962 . + . ID=gene-NLI98_RS15250;Name=NLI98_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15250;old_locus_tag=NLI98_15245 NZ_CP100601.1 Protein Homology CDS 3134745 3135962 . + 0 ID=cds-WP_032439868.1;Parent=gene-NLI98_RS15250;Dbxref=Genbank:WP_032439868.1;Name=WP_032439868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226369.1;locus_tag=NLI98_RS15250;product=MFS transporter;protein_id=WP_032439868.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3135959 3136708 . - . ID=gene-NLI98_RS15255;Name=NLI98_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15255;old_locus_tag=NLI98_15250 NZ_CP100601.1 Protein Homology CDS 3135959 3136708 . - 0 ID=cds-WP_002901225.1;Parent=gene-NLI98_RS15255;Dbxref=Genbank:WP_002901225.1;Name=WP_002901225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226368.1;locus_tag=NLI98_RS15255;product=SDR family oxidoreductase;protein_id=WP_002901225.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3136875 3137780 . + . ID=gene-NLI98_RS15260;Name=NLI98_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15260;old_locus_tag=NLI98_15255 NZ_CP100601.1 Protein Homology CDS 3136875 3137780 . + 0 ID=cds-WP_032439867.1;Parent=gene-NLI98_RS15260;Dbxref=Genbank:WP_032439867.1;Name=WP_032439867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226367.1;locus_tag=NLI98_RS15260;product=LysR family transcriptional regulator;protein_id=WP_032439867.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3137787 3139052 . - . ID=gene-NLI98_RS15265;Name=NLI98_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15265;old_locus_tag=NLI98_15260 NZ_CP100601.1 Protein Homology CDS 3137787 3139052 . - 0 ID=cds-WP_004183665.1;Parent=gene-NLI98_RS15265;Dbxref=Genbank:WP_004183665.1;Name=WP_004183665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226366.1;locus_tag=NLI98_RS15265;product=Y-family DNA polymerase;protein_id=WP_004183665.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3139055 3139474 . - . ID=gene-NLI98_RS15270;Name=NLI98_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15270;old_locus_tag=NLI98_15265 NZ_CP100601.1 Protein Homology CDS 3139055 3139474 . - 0 ID=cds-WP_002901192.1;Parent=gene-NLI98_RS15270;Dbxref=Genbank:WP_002901192.1;Name=WP_002901192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226365.1;locus_tag=NLI98_RS15270;product=translesion error-prone DNA polymerase V autoproteolytic subunit;protein_id=WP_002901192.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3139745 3139987 . + . ID=gene-NLI98_RS15275;Name=NLI98_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15275;old_locus_tag=NLI98_15270 NZ_CP100601.1 Protein Homology CDS 3139745 3139987 . + 0 ID=cds-WP_002901096.1;Parent=gene-NLI98_RS15275;Dbxref=Genbank:WP_002901096.1;Name=WP_002901096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226363.1;locus_tag=NLI98_RS15275;product=DinI family protein;protein_id=WP_002901096.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3140158 3141294 . - . ID=gene-NLI98_RS15280;Name=NLI98_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15280;old_locus_tag=NLI98_15275 NZ_CP100601.1 Protein Homology CDS 3140158 3141294 . - 0 ID=cds-WP_014907796.1;Parent=gene-NLI98_RS15280;Dbxref=Genbank:WP_014907796.1;Name=WP_014907796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226362.1;locus_tag=NLI98_RS15280;product=glycosyltransferase family 9 protein;protein_id=WP_014907796.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 3141289 3141445 . + . ID=gene-NLI98_RS15285;Name=NLI98_RS15285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS15285;old_locus_tag=NLI98_15280;pseudo=true NZ_CP100601.1 Protein Homology CDS 3141289 3141445 . + 0 ID=cds-NLI98_RS15285;Parent=gene-NLI98_RS15285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226361.1;locus_tag=NLI98_RS15285;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 3141541 3142041 . + . ID=gene-NLI98_RS15290;Name=NLI98_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15290;old_locus_tag=NLI98_15285 NZ_CP100601.1 Protein Homology CDS 3141541 3142041 . + 0 ID=cds-WP_002901088.1;Parent=gene-NLI98_RS15290;Dbxref=Genbank:WP_002901088.1;Name=WP_002901088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226360.1;locus_tag=NLI98_RS15290;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_002901088.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3142158 3142604 . + . ID=gene-NLI98_RS15295;Name=NLI98_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15295;old_locus_tag=NLI98_15290 NZ_CP100601.1 Protein Homology CDS 3142158 3142604 . + 0 ID=cds-WP_002901080.1;Parent=gene-NLI98_RS15295;Dbxref=Genbank:WP_002901080.1;Name=WP_002901080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226359.1;locus_tag=NLI98_RS15295;product=DUF441 domain-containing protein;protein_id=WP_002901080.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3142588 3143382 . - . ID=gene-NLI98_RS15300;Name=NLI98_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15300;old_locus_tag=NLI98_15295 NZ_CP100601.1 Protein Homology CDS 3142588 3143382 . - 0 ID=cds-WP_004140469.1;Parent=gene-NLI98_RS15300;Dbxref=Genbank:WP_004140469.1;Name=WP_004140469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226358.1;locus_tag=NLI98_RS15300;product=helix-turn-helix transcriptional regulator;protein_id=WP_004140469.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3143490 3144665 . + . ID=gene-NLI98_RS15305;Name=NLI98_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15305;old_locus_tag=NLI98_15300 NZ_CP100601.1 Protein Homology CDS 3143490 3144665 . + 0 ID=cds-WP_074177521.1;Parent=gene-NLI98_RS15305;Dbxref=Genbank:WP_074177521.1;Name=WP_074177521.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226357.1;locus_tag=NLI98_RS15305;product=CynX/NimT family MFS transporter;protein_id=WP_074177521.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3144697 3145389 . - . ID=gene-NLI98_RS15310;Name=NLI98_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15310;old_locus_tag=NLI98_15305 NZ_CP100601.1 Protein Homology CDS 3144697 3145389 . - 0 ID=cds-WP_032439865.1;Parent=gene-NLI98_RS15310;Dbxref=Genbank:WP_032439865.1;Name=WP_032439865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226356.1;locus_tag=NLI98_RS15310;product=CTP synthase;protein_id=WP_032439865.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3145535 3146044 . + . ID=gene-NLI98_RS15315;Name=NLI98_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15315;old_locus_tag=NLI98_15310 NZ_CP100601.1 Protein Homology CDS 3145535 3146044 . + 0 ID=cds-WP_004892886.1;Parent=gene-NLI98_RS15315;Dbxref=Genbank:WP_004892886.1;Name=WP_004892886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226355.1;locus_tag=NLI98_RS15315;product=DUF523 domain-containing protein;protein_id=WP_004892886.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3146049 3146387 . + . ID=gene-NLI98_RS15320;Name=NLI98_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15320;old_locus_tag=NLI98_15315 NZ_CP100601.1 Protein Homology CDS 3146049 3146387 . + 0 ID=cds-WP_014343000.1;Parent=gene-NLI98_RS15320;Dbxref=Genbank:WP_014343000.1;Name=WP_014343000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226354.1;locus_tag=NLI98_RS15320;product=DUF488 family protein;protein_id=WP_014343000.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3146377 3146616 . - . ID=gene-NLI98_RS15325;Name=NLI98_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15325;old_locus_tag=NLI98_15320 NZ_CP100601.1 Protein Homology CDS 3146377 3146616 . - 0 ID=cds-WP_048337622.1;Parent=gene-NLI98_RS15325;Dbxref=Genbank:WP_048337622.1;Name=WP_048337622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226353.1;locus_tag=NLI98_RS15325;product=DUF333 domain-containing protein;protein_id=WP_048337622.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3146918 3147931 . + . ID=gene-NLI98_RS15330;Name=NLI98_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15330;old_locus_tag=NLI98_15325 NZ_CP100601.1 Protein Homology CDS 3146918 3147931 . + 0 ID=cds-WP_004176549.1;Parent=gene-NLI98_RS15330;Dbxref=Genbank:WP_004176549.1;Name=WP_004176549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226352.1;locus_tag=NLI98_RS15330;product=sensor domain-containing diguanylate cyclase;protein_id=WP_004176549.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3147989 3148090 . + . ID=gene-NLI98_RS15335;Name=NLI98_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15335;old_locus_tag=NLI98_15330 NZ_CP100601.1 Protein Homology CDS 3147989 3148090 . + 0 ID=cds-WP_004150782.1;Parent=gene-NLI98_RS15335;Dbxref=Genbank:WP_004150782.1;Name=WP_004150782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004150782.1;locus_tag=NLI98_RS15335;product=YoaK family small membrane protein;protein_id=WP_004150782.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3148282 3148407 . + . ID=gene-NLI98_RS15340;Name=NLI98_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15340;old_locus_tag=NLI98_15335 NZ_CP100601.1 Protein Homology CDS 3148282 3148407 . + 0 ID=cds-WP_004140488.1;Parent=gene-NLI98_RS15340;Dbxref=Genbank:WP_004140488.1;Name=WP_004140488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226350.1;locus_tag=NLI98_RS15340;product=hypothetical protein;protein_id=WP_004140488.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3148467 3148730 . - . ID=gene-NLI98_RS15345;Name=NLI98_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15345;old_locus_tag=NLI98_15340 NZ_CP100601.1 Protein Homology CDS 3148467 3148730 . - 0 ID=cds-WP_004190891.1;Parent=gene-NLI98_RS15345;Dbxref=Genbank:WP_004190891.1;Name=WP_004190891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226349.1;locus_tag=NLI98_RS15345;product=DUF2534 family protein;protein_id=WP_004190891.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3148861 3149499 . - . ID=gene-NLI98_RS15350;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=NLI98_RS15350;old_locus_tag=NLI98_15345 NZ_CP100601.1 Protein Homology CDS 3148861 3149499 . - 0 ID=cds-WP_004150783.1;Parent=gene-NLI98_RS15350;Dbxref=Genbank:WP_004150783.1;Name=WP_004150783.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226348.1;locus_tag=NLI98_RS15350;product=leucine efflux protein LeuE;protein_id=WP_004150783.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3149589 3150503 . - . ID=gene-NLI98_RS15355;Name=lpxP;gbkey=Gene;gene=lpxP;gene_biotype=protein_coding;locus_tag=NLI98_RS15355;old_locus_tag=NLI98_15350 NZ_CP100601.1 Protein Homology CDS 3149589 3150503 . - 0 ID=cds-WP_004148038.1;Parent=gene-NLI98_RS15355;Dbxref=Genbank:WP_004148038.1;Name=WP_004148038.1;Ontology_term=GO:0009409,GO:0036104,GO:0008951,GO:0016020;gbkey=CDS;gene=lpxP;go_component=membrane|0016020||IEA;go_function=palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity|0008951||IEA;go_process=response to cold|0009409||IEA,Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226347.1;locus_tag=NLI98_RS15355;product=kdo(2)-lipid IV(A) palmitoleoyltransferase;protein_id=WP_004148038.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3151165 3152208 . - . ID=gene-NLI98_RS15360;Name=fraE;gbkey=Gene;gene=fraE;gene_biotype=protein_coding;locus_tag=NLI98_RS15360;old_locus_tag=NLI98_15355 NZ_CP100601.1 Protein Homology CDS 3151165 3152208 . - 0 ID=cds-WP_004150784.1;Parent=gene-NLI98_RS15360;Dbxref=Genbank:WP_004150784.1;Name=WP_004150784.1;gbkey=CDS;gene=fraE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226344.1;locus_tag=NLI98_RS15360;product=fructose-asparagine asparaginase;protein_id=WP_004150784.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3152511 3153719 . + . ID=gene-NLI98_RS15365;Name=NLI98_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15365;old_locus_tag=NLI98_15360 NZ_CP100601.1 Protein Homology CDS 3152511 3153719 . + 0 ID=cds-WP_004140494.1;Parent=gene-NLI98_RS15365;Dbxref=Genbank:WP_004140494.1;Name=WP_004140494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226343.1;locus_tag=NLI98_RS15365;product=HD domain-containing protein;protein_id=WP_004140494.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3153793 3155577 . + . ID=gene-NLI98_RS15370;Name=NLI98_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15370;old_locus_tag=NLI98_15365 NZ_CP100601.1 Protein Homology CDS 3153793 3155577 . + 0 ID=cds-WP_087761155.1;Parent=gene-NLI98_RS15370;Dbxref=Genbank:WP_087761155.1;Name=WP_087761155.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226342.1;locus_tag=NLI98_RS15370;product=diguanylate cyclase;protein_id=WP_087761155.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3155584 3156474 . - . ID=gene-NLI98_RS15375;Name=NLI98_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15375;old_locus_tag=NLI98_15370 NZ_CP100601.1 Protein Homology CDS 3155584 3156474 . - 0 ID=cds-WP_004150788.1;Parent=gene-NLI98_RS15375;Dbxref=Genbank:WP_004150788.1;Name=WP_004150788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226341.1;locus_tag=NLI98_RS15375;product=LysR substrate-binding domain-containing protein;protein_id=WP_004150788.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3156595 3158103 . + . ID=gene-NLI98_RS15380;Name=NLI98_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15380;old_locus_tag=NLI98_15375 NZ_CP100601.1 Protein Homology CDS 3156595 3158103 . + 0 ID=cds-WP_004140497.1;Parent=gene-NLI98_RS15380;Dbxref=Genbank:WP_004140497.1;Name=WP_004140497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226340.1;locus_tag=NLI98_RS15380;product=UbiD family decarboxylase;protein_id=WP_004140497.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3158137 3158301 . + . ID=gene-NLI98_RS15385;Name=NLI98_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15385;old_locus_tag=NLI98_15380 NZ_CP100601.1 Protein Homology CDS 3158137 3158301 . + 0 ID=cds-WP_009486509.1;Parent=gene-NLI98_RS15385;Dbxref=Genbank:WP_009486509.1;Name=WP_009486509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226339.1;locus_tag=NLI98_RS15385;product=hypothetical protein;protein_id=WP_009486509.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3158414 3159100 . - . ID=gene-NLI98_RS15390;Name=NLI98_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15390;old_locus_tag=NLI98_15385 NZ_CP100601.1 Protein Homology CDS 3158414 3159100 . - 0 ID=cds-WP_004150790.1;Parent=gene-NLI98_RS15390;Dbxref=Genbank:WP_004150790.1;Name=WP_004150790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226338.1;locus_tag=NLI98_RS15390;product=EAL domain-containing protein;protein_id=WP_004150790.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3159498 3159677 . - . ID=gene-NLI98_RS15395;Name=NLI98_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15395;old_locus_tag=NLI98_15390 NZ_CP100601.1 Protein Homology CDS 3159498 3159677 . - 0 ID=cds-WP_048990058.1;Parent=gene-NLI98_RS15395;Dbxref=Genbank:WP_048990058.1;Name=WP_048990058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226337.1;locus_tag=NLI98_RS15395;product=hypothetical protein;protein_id=WP_048990058.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3159717 3160349 . - . ID=gene-NLI98_RS15400;Name=NLI98_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15400;old_locus_tag=NLI98_15395 NZ_CP100601.1 Protein Homology CDS 3159717 3160349 . - 0 ID=cds-WP_004150791.1;Parent=gene-NLI98_RS15400;Dbxref=Genbank:WP_004150791.1;Name=WP_004150791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226336.1;locus_tag=NLI98_RS15400;product=DNA-binding protein;protein_id=WP_004150791.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3160916 3161113 . + . ID=gene-NLI98_RS15405;Name=NLI98_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15405;old_locus_tag=NLI98_15400 NZ_CP100601.1 Protein Homology CDS 3160916 3161113 . + 0 ID=cds-WP_004140506.1;Parent=gene-NLI98_RS15405;Dbxref=Genbank:WP_004140506.1;Name=WP_004140506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226335.1;locus_tag=NLI98_RS15405;product=hypothetical protein;protein_id=WP_004140506.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3161226 3162236 . - . ID=gene-NLI98_RS15410;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=NLI98_RS15410;old_locus_tag=NLI98_15405 NZ_CP100601.1 Protein Homology CDS 3161226 3162236 . - 0 ID=cds-WP_004140509.1;Parent=gene-NLI98_RS15410;Dbxref=Genbank:WP_004140509.1;Name=WP_004140509.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226334.1;locus_tag=NLI98_RS15410;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_004140509.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3162233 3163639 . - . ID=gene-NLI98_RS15415;Name=NLI98_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15415;old_locus_tag=NLI98_15410 NZ_CP100601.1 Protein Homology CDS 3162233 3163639 . - 0 ID=cds-WP_004140511.1;Parent=gene-NLI98_RS15415;Dbxref=Genbank:WP_004140511.1;Name=WP_004140511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009308425.1;locus_tag=NLI98_RS15415;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_004140511.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3163695 3164582 . - . ID=gene-NLI98_RS15420;Name=NLI98_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15420;old_locus_tag=NLI98_15415 NZ_CP100601.1 Protein Homology CDS 3163695 3164582 . - 0 ID=cds-WP_004179357.1;Parent=gene-NLI98_RS15420;Dbxref=Genbank:WP_004179357.1;Name=WP_004179357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226332.1;locus_tag=NLI98_RS15420;product=manganese catalase family protein;protein_id=WP_004179357.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3164599 3165105 . - . ID=gene-NLI98_RS15425;Name=NLI98_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15425;old_locus_tag=NLI98_15420 NZ_CP100601.1 Protein Homology CDS 3164599 3165105 . - 0 ID=cds-WP_004140514.1;Parent=gene-NLI98_RS15425;Dbxref=Genbank:WP_004140514.1;Name=WP_004140514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226331.1;locus_tag=NLI98_RS15425;product=ferritin-like domain-containing protein;protein_id=WP_004140514.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3165132 3165626 . - . ID=gene-NLI98_RS15430;Name=NLI98_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15430;old_locus_tag=NLI98_15425 NZ_CP100601.1 Protein Homology CDS 3165132 3165626 . - 0 ID=cds-WP_088498389.1;Parent=gene-NLI98_RS15430;Dbxref=Genbank:WP_088498389.1;Name=WP_088498389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226330.1;locus_tag=NLI98_RS15430;product=ferritin-like domain-containing protein;protein_id=WP_088498389.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3165717 3165902 . - . ID=gene-NLI98_RS15435;Name=NLI98_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15435;old_locus_tag=NLI98_15430 NZ_CP100601.1 Protein Homology CDS 3165717 3165902 . - 0 ID=cds-WP_004150795.1;Parent=gene-NLI98_RS15435;Dbxref=Genbank:WP_004150795.1;Name=WP_004150795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227107.1;locus_tag=NLI98_RS15435;product=general stress protein;protein_id=WP_004150795.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3166122 3166274 . + . ID=gene-NLI98_RS15440;Name=NLI98_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15440;old_locus_tag=NLI98_15435 NZ_CP100601.1 GeneMarkS-2+ CDS 3166122 3166274 . + 0 ID=cds-WP_159110646.1;Parent=gene-NLI98_RS15440;Dbxref=Genbank:WP_159110646.1;Name=WP_159110646.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS15440;product=hypothetical protein;protein_id=WP_159110646.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3166524 3167717 . + . ID=gene-NLI98_RS15445;Name=NLI98_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15445;old_locus_tag=NLI98_15440 NZ_CP100601.1 Protein Homology CDS 3166524 3167717 . + 0 ID=cds-WP_004140529.1;Parent=gene-NLI98_RS15445;Dbxref=Genbank:WP_004140529.1;Name=WP_004140529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226327.1;locus_tag=NLI98_RS15445;product=glutathione-dependent formaldehyde dehydrogenase;protein_id=WP_004140529.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3167830 3168057 . + . ID=gene-NLI98_RS15450;Name=NLI98_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15450;old_locus_tag=NLI98_15445 NZ_CP100601.1 Protein Homology CDS 3167830 3168057 . + 0 ID=cds-WP_004140530.1;Parent=gene-NLI98_RS15450;Dbxref=Genbank:WP_004140530.1;Name=WP_004140530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004140530.1;locus_tag=NLI98_RS15450;product=DUF1272 domain-containing protein;protein_id=WP_004140530.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3168211 3168387 . + . ID=gene-NLI98_RS15455;Name=NLI98_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15455;old_locus_tag=NLI98_15450 NZ_CP100601.1 Protein Homology CDS 3168211 3168387 . + 0 ID=cds-WP_020805510.1;Parent=gene-NLI98_RS15455;Dbxref=Genbank:WP_020805510.1;Name=WP_020805510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226325.1;locus_tag=NLI98_RS15455;product=hypothetical protein;protein_id=WP_020805510.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3168507 3168830 . + . ID=gene-NLI98_RS15460;Name=NLI98_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15460;old_locus_tag=NLI98_15455 NZ_CP100601.1 Protein Homology CDS 3168507 3168830 . + 0 ID=cds-WP_004150797.1;Parent=gene-NLI98_RS15460;Dbxref=Genbank:WP_004150797.1;Name=WP_004150797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226324.1;locus_tag=NLI98_RS15460;product=antibiotic biosynthesis monooxygenase;protein_id=WP_004150797.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3168823 3169215 . + . ID=gene-NLI98_RS15465;Name=NLI98_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15465;old_locus_tag=NLI98_15460 NZ_CP100601.1 Protein Homology CDS 3168823 3169215 . + 0 ID=cds-WP_004150798.1;Parent=gene-NLI98_RS15465;Dbxref=Genbank:WP_004150798.1;Name=WP_004150798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226323.1;locus_tag=NLI98_RS15465;product=amino acid-binding protein;protein_id=WP_004150798.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3169212 3169925 . + . ID=gene-NLI98_RS15470;Name=NLI98_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15470;old_locus_tag=NLI98_15465 NZ_CP100601.1 Protein Homology CDS 3169212 3169925 . + 0 ID=cds-WP_020324087.1;Parent=gene-NLI98_RS15470;Dbxref=Genbank:WP_020324087.1;Name=WP_020324087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226322.1;locus_tag=NLI98_RS15470;product=winged helix-turn-helix domain-containing protein;protein_id=WP_020324087.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3170198 3171448 . - . ID=gene-NLI98_RS15475;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=NLI98_RS15475;old_locus_tag=NLI98_15470 NZ_CP100601.1 Protein Homology CDS 3170198 3171448 . - 0 ID=cds-WP_004150800.1;Parent=gene-NLI98_RS15475;Dbxref=Genbank:WP_004150800.1;Name=WP_004150800.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000444467.1;locus_tag=NLI98_RS15475;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_004150800.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3171689 3172339 . + . ID=gene-NLI98_RS15480;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=NLI98_RS15480;old_locus_tag=NLI98_15475 NZ_CP100601.1 Protein Homology CDS 3171689 3172339 . + 0 ID=cds-WP_004150801.1;Parent=gene-NLI98_RS15480;Dbxref=Genbank:WP_004150801.1;Name=WP_004150801.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226320.1;locus_tag=NLI98_RS15480;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_004150801.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3172356 3172814 . + . ID=gene-NLI98_RS15485;Name=NLI98_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15485;old_locus_tag=NLI98_15480 NZ_CP100601.1 Protein Homology CDS 3172356 3172814 . + 0 ID=cds-WP_004150802.1;Parent=gene-NLI98_RS15485;Dbxref=Genbank:WP_004150802.1;Name=WP_004150802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226319.1;locus_tag=NLI98_RS15485;product=NUDIX hydrolase;protein_id=WP_004150802.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3172871 3173977 . + . ID=gene-NLI98_RS15490;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=NLI98_RS15490;old_locus_tag=NLI98_15485 NZ_CP100601.1 Protein Homology CDS 3172871 3173977 . + 0 ID=cds-WP_004150803.1;Parent=gene-NLI98_RS15490;Dbxref=Genbank:WP_004150803.1;Name=WP_004150803.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226318.1;locus_tag=NLI98_RS15490;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_004150803.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3174032 3174673 . + . ID=gene-NLI98_RS15495;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=NLI98_RS15495;old_locus_tag=NLI98_15490 NZ_CP100601.1 Protein Homology CDS 3174032 3174673 . + 0 ID=cds-WP_004140557.1;Parent=gene-NLI98_RS15495;Dbxref=Genbank:WP_004140557.1;Name=WP_004140557.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226317.1;locus_tag=NLI98_RS15495;product=high frequency lysogenization protein HflD;protein_id=WP_004140557.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3174677 3176047 . + . ID=gene-NLI98_RS15500;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=NLI98_RS15500;old_locus_tag=NLI98_15495 NZ_CP100601.1 Protein Homology CDS 3174677 3176047 . + 0 ID=cds-WP_004176557.1;Parent=gene-NLI98_RS15500;Dbxref=Genbank:WP_004176557.1;Name=WP_004176557.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002950897.1;locus_tag=NLI98_RS15500;product=adenylosuccinate lyase;protein_id=WP_004176557.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3176102 3176464 . - . ID=gene-NLI98_RS15505;Name=NLI98_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15505;old_locus_tag=NLI98_15500 NZ_CP100601.1 Protein Homology CDS 3176102 3176464 . - 0 ID=cds-WP_032104002.1;Parent=gene-NLI98_RS15505;Dbxref=Genbank:WP_032104002.1;Name=WP_032104002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226315.1;locus_tag=NLI98_RS15505;product=cupin domain-containing protein;protein_id=WP_032104002.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3176548 3177354 . - . ID=gene-NLI98_RS15510;Name=NLI98_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15510;old_locus_tag=NLI98_15505 NZ_CP100601.1 Protein Homology CDS 3176548 3177354 . - 0 ID=cds-WP_004179353.1;Parent=gene-NLI98_RS15510;Dbxref=Genbank:WP_004179353.1;Name=WP_004179353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226314.1;locus_tag=NLI98_RS15510;product=AraC family transcriptional regulator;protein_id=WP_004179353.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3177638 3178309 . + . ID=gene-NLI98_RS15515;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=NLI98_RS15515;old_locus_tag=NLI98_15510 NZ_CP100601.1 Protein Homology CDS 3177638 3178309 . + 0 ID=cds-WP_065896068.1;Parent=gene-NLI98_RS15515;Dbxref=Genbank:WP_065896068.1;Name=WP_065896068.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226313.1;locus_tag=NLI98_RS15515;product=two-component system response regulator PhoP;protein_id=WP_065896068.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3178309 3179775 . + . ID=gene-NLI98_RS15520;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=NLI98_RS15520;old_locus_tag=NLI98_15515 NZ_CP100601.1 Protein Homology CDS 3178309 3179775 . + 0 ID=cds-WP_004147969.1;Parent=gene-NLI98_RS15520;Dbxref=Genbank:WP_004147969.1;Name=WP_004147969.1;Ontology_term=GO:0000160,GO:0000155,GO:0004673,GO:0016772;gbkey=CDS;gene=phoQ;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226312.1;locus_tag=NLI98_RS15520;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_004147969.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3179861 3180982 . + . ID=gene-NLI98_RS15525;Name=NLI98_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15525;old_locus_tag=NLI98_15520 NZ_CP100601.1 Protein Homology CDS 3179861 3180982 . + 0 ID=cds-WP_004176560.1;Parent=gene-NLI98_RS15525;Dbxref=Genbank:WP_004176560.1;Name=WP_004176560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226311.1;locus_tag=NLI98_RS15525;product=cupin domain-containing protein;protein_id=WP_004176560.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3181120 3181611 . - . ID=gene-NLI98_RS15530;Name=NLI98_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15530;old_locus_tag=NLI98_15525 NZ_CP100601.1 Protein Homology CDS 3181120 3181611 . - 0 ID=cds-WP_004146570.1;Parent=gene-NLI98_RS15530;Dbxref=Genbank:WP_004146570.1;Name=WP_004146570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019706048.1;locus_tag=NLI98_RS15530;product=transposase;protein_id=WP_004146570.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3182130 3183362 . - . ID=gene-NLI98_RS15535;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=NLI98_RS15535;old_locus_tag=NLI98_15530 NZ_CP100601.1 Protein Homology CDS 3182130 3183362 . - 0 ID=cds-WP_004150810.1;Parent=gene-NLI98_RS15535;Dbxref=Genbank:WP_004150810.1;Name=WP_004150810.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226310.1;locus_tag=NLI98_RS15535;product=peptidase T;protein_id=WP_004150810.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3183621 3184757 . + . ID=gene-NLI98_RS15540;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=NLI98_RS15540;old_locus_tag=NLI98_15535 NZ_CP100601.1 Protein Homology CDS 3183621 3184757 . + 0 ID=cds-WP_004150811.1;Parent=gene-NLI98_RS15540;Dbxref=Genbank:WP_004150811.1;Name=WP_004150811.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226309.1;locus_tag=NLI98_RS15540;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_004150811.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3184741 3185598 . + . ID=gene-NLI98_RS15545;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=NLI98_RS15545;old_locus_tag=NLI98_15540 NZ_CP100601.1 Protein Homology CDS 3184741 3185598 . + 0 ID=cds-WP_004150812.1;Parent=gene-NLI98_RS15545;Dbxref=Genbank:WP_004150812.1;Name=WP_004150812.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226308.1;locus_tag=NLI98_RS15545;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_004150812.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3185595 3186380 . + . ID=gene-NLI98_RS15550;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=NLI98_RS15550;old_locus_tag=NLI98_15545 NZ_CP100601.1 Protein Homology CDS 3185595 3186380 . + 0 ID=cds-WP_004150813.1;Parent=gene-NLI98_RS15550;Dbxref=Genbank:WP_004150813.1;Name=WP_004150813.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226307.1;locus_tag=NLI98_RS15550;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_004150813.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3186377 3187423 . + . ID=gene-NLI98_RS15555;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=NLI98_RS15555;old_locus_tag=NLI98_15550 NZ_CP100601.1 Protein Homology CDS 3186377 3187423 . + 0 ID=cds-WP_004140590.1;Parent=gene-NLI98_RS15555;Dbxref=Genbank:WP_004140590.1;Name=WP_004140590.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121082.1;locus_tag=NLI98_RS15555;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_004140590.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3187470 3189194 . - . ID=gene-NLI98_RS15560;Name=NLI98_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15560;old_locus_tag=NLI98_15555 NZ_CP100601.1 Protein Homology CDS 3187470 3189194 . - 0 ID=cds-WP_004892971.1;Parent=gene-NLI98_RS15560;Dbxref=Genbank:WP_004892971.1;Name=WP_004892971.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226305.1;locus_tag=NLI98_RS15560;product=aldehyde dehydrogenase family protein;protein_id=WP_004892971.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 3189191 3190818 . - . ID=gene-NLI98_RS15565;Name=NLI98_RS15565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS15565;old_locus_tag=NLI98_15560;pseudo=true NZ_CP100601.1 Protein Homology CDS 3189191 3190818 . - 0 ID=cds-NLI98_RS15565;Parent=gene-NLI98_RS15565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804477.1;locus_tag=NLI98_RS15565;product=long-chain fatty acid--CoA ligase;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 3191056 3193062 . - . ID=gene-NLI98_RS15570;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=NLI98_RS15570;old_locus_tag=NLI98_15565 NZ_CP100601.1 Protein Homology CDS 3191056 3193062 . - 0 ID=cds-WP_210849620.1;Parent=gene-NLI98_RS15570;Dbxref=Genbank:WP_210849620.1;Name=WP_210849620.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146112.1;locus_tag=NLI98_RS15570;product=transketolase;protein_id=WP_210849620.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3193082 3194032 . - . ID=gene-NLI98_RS15575;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=NLI98_RS15575;old_locus_tag=NLI98_15570 NZ_CP100601.1 Protein Homology CDS 3193082 3194032 . - 0 ID=cds-WP_004147958.1;Parent=gene-NLI98_RS15575;Dbxref=Genbank:WP_004147958.1;Name=WP_004147958.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016807641.1;locus_tag=NLI98_RS15575;product=transaldolase;protein_id=WP_004147958.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3194063 3194521 . - . ID=gene-NLI98_RS15580;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=NLI98_RS15580;old_locus_tag=NLI98_15575 NZ_CP100601.1 Protein Homology CDS 3194063 3194521 . - 0 ID=cds-WP_004140598.1;Parent=gene-NLI98_RS15580;Dbxref=Genbank:WP_004140598.1;Name=WP_004140598.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiB;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367158.1;locus_tag=NLI98_RS15580;product=ribose 5-phosphate isomerase B;protein_id=WP_004140598.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3194550 3194924 . - . ID=gene-NLI98_RS15585;Name=NLI98_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15585;old_locus_tag=NLI98_15580 NZ_CP100601.1 Protein Homology CDS 3194550 3194924 . - 0 ID=cds-WP_088498120.1;Parent=gene-NLI98_RS15585;Dbxref=Genbank:WP_088498120.1;Name=WP_088498120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160623.1;locus_tag=NLI98_RS15585;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_088498120.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3194926 3195945 . - . ID=gene-NLI98_RS15590;Name=NLI98_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15590;old_locus_tag=NLI98_15585 NZ_CP100601.1 Protein Homology CDS 3194926 3195945 . - 0 ID=cds-WP_004140602.1;Parent=gene-NLI98_RS15590;Dbxref=Genbank:WP_004140602.1;Name=WP_004140602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190951.1;locus_tag=NLI98_RS15590;product=2-keto-3-deoxygluconate permease;protein_id=WP_004140602.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3196038 3197756 . - . ID=gene-NLI98_RS15595;Name=NLI98_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15595;old_locus_tag=NLI98_15590 NZ_CP100601.1 Protein Homology CDS 3196038 3197756 . - 0 ID=cds-WP_023325138.1;Parent=gene-NLI98_RS15595;Dbxref=Genbank:WP_023325138.1;Name=WP_023325138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968563.1;locus_tag=NLI98_RS15595;product=four-carbon acid sugar kinase family protein;protein_id=WP_023325138.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3197792 3198799 . - . ID=gene-NLI98_RS15600;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=NLI98_RS15600;old_locus_tag=NLI98_15595 NZ_CP100601.1 Protein Homology CDS 3197792 3198799 . - 0 ID=cds-WP_004179336.1;Parent=gene-NLI98_RS15600;Dbxref=Genbank:WP_004179336.1;Name=WP_004179336.1;gbkey=CDS;gene=pdxA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806010.1;locus_tag=NLI98_RS15600;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_004179336.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3199042 3199836 . + . ID=gene-NLI98_RS15605;Name=NLI98_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15605;old_locus_tag=NLI98_15600 NZ_CP100601.1 Protein Homology CDS 3199042 3199836 . + 0 ID=cds-WP_004211823.1;Parent=gene-NLI98_RS15605;Dbxref=Genbank:WP_004211823.1;Name=WP_004211823.1;Ontology_term=GO:0004807;gbkey=CDS;go_function=triose-phosphate isomerase activity|0004807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195954.1;locus_tag=NLI98_RS15605;product=triose-phosphate isomerase;protein_id=WP_004211823.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3199872 3200834 . + . ID=gene-NLI98_RS15610;Name=NLI98_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15610;old_locus_tag=NLI98_15605 NZ_CP100601.1 Protein Homology CDS 3199872 3200834 . + 0 ID=cds-WP_004140612.1;Parent=gene-NLI98_RS15610;Dbxref=Genbank:WP_004140612.1;Name=WP_004140612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324988.1;locus_tag=NLI98_RS15610;product=sugar-binding transcriptional regulator;protein_id=WP_004140612.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3200859 3201203 . - . ID=gene-NLI98_RS15615;Name=NLI98_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15615;old_locus_tag=NLI98_15610 NZ_CP100601.1 Protein Homology CDS 3200859 3201203 . - 0 ID=cds-WP_023316669.1;Parent=gene-NLI98_RS15615;Dbxref=Genbank:WP_023316669.1;Name=WP_023316669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226302.1;locus_tag=NLI98_RS15615;product=hypothetical protein;protein_id=WP_023316669.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3201294 3202124 . - . ID=gene-NLI98_RS15620;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=NLI98_RS15620;old_locus_tag=NLI98_15615 NZ_CP100601.1 Protein Homology CDS 3201294 3202124 . - 0 ID=cds-WP_004176563.1;Parent=gene-NLI98_RS15620;Dbxref=Genbank:WP_004176563.1;Name=WP_004176563.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017898959.1;locus_tag=NLI98_RS15620;product=NAD-dependent protein deacylase;protein_id=WP_004176563.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3202139 3203050 . - . ID=gene-NLI98_RS15625;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=NLI98_RS15625;old_locus_tag=NLI98_15620 NZ_CP100601.1 Protein Homology CDS 3202139 3203050 . - 0 ID=cds-WP_004140619.1;Parent=gene-NLI98_RS15625;Dbxref=Genbank:WP_004140619.1;Name=WP_004140619.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226300.1;locus_tag=NLI98_RS15625;product=N-acetylglucosamine kinase;protein_id=WP_004140619.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3203099 3204343 . - . ID=gene-NLI98_RS15630;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=NLI98_RS15630;old_locus_tag=NLI98_15625 NZ_CP100601.1 Protein Homology CDS 3203099 3204343 . - 0 ID=cds-WP_004176565.1;Parent=gene-NLI98_RS15630;Dbxref=Genbank:WP_004176565.1;Name=WP_004176565.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460189.1;locus_tag=NLI98_RS15630;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_004176565.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3204343 3205044 . - . ID=gene-NLI98_RS15635;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=NLI98_RS15635;old_locus_tag=NLI98_15630 NZ_CP100601.1 Protein Homology CDS 3204343 3205044 . - 0 ID=cds-WP_002900798.1;Parent=gene-NLI98_RS15635;Dbxref=Genbank:WP_002900798.1;Name=WP_002900798.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226298.1;locus_tag=NLI98_RS15635;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_002900798.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3205037 3206236 . - . ID=gene-NLI98_RS15640;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=NLI98_RS15640;old_locus_tag=NLI98_15635 NZ_CP100601.1 Protein Homology CDS 3205037 3206236 . - 0 ID=cds-WP_004176566.1;Parent=gene-NLI98_RS15640;Dbxref=Genbank:WP_004176566.1;Name=WP_004176566.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004976588.1;locus_tag=NLI98_RS15640;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_004176566.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3206370 3206501 . - . ID=gene-NLI98_RS15645;Name=NLI98_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15645;old_locus_tag=NLI98_15640 NZ_CP100601.1 Protein Homology CDS 3206370 3206501 . - 0 ID=cds-WP_004140630.1;Parent=gene-NLI98_RS15645;Dbxref=Genbank:WP_004140630.1;Name=WP_004140630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226296.1;locus_tag=NLI98_RS15645;product=hypothetical protein;protein_id=WP_004140630.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3206541 3209987 . + . ID=gene-NLI98_RS15650;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=NLI98_RS15650;old_locus_tag=NLI98_15645 NZ_CP100601.1 Protein Homology CDS 3206541 3209987 . + 0 ID=cds-WP_020325001.1;Parent=gene-NLI98_RS15650;Dbxref=Genbank:WP_020325001.1;Name=WP_020325001.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226295.1;locus_tag=NLI98_RS15650;product=transcription-repair coupling factor;protein_id=WP_020325001.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3210145 3211110 . + . ID=gene-NLI98_RS15655;Name=NLI98_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15655;old_locus_tag=NLI98_15650 NZ_CP100601.1 Protein Homology CDS 3210145 3211110 . + 0 ID=cds-WP_004160431.1;Parent=gene-NLI98_RS15655;Dbxref=Genbank:WP_004160431.1;Name=WP_004160431.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001350500.1;locus_tag=NLI98_RS15655;product=L%2CD-transpeptidase family protein;protein_id=WP_004160431.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3211239 3211496 . - . ID=gene-NLI98_RS15660;Name=bhsA;gbkey=Gene;gene=bhsA;gene_biotype=protein_coding;gene_synonym=ycfR;locus_tag=NLI98_RS15660;old_locus_tag=NLI98_15655 NZ_CP100601.1 Protein Homology CDS 3211239 3211496 . - 0 ID=cds-WP_002900788.1;Parent=gene-NLI98_RS15660;Dbxref=Genbank:WP_002900788.1;Name=WP_002900788.1;gbkey=CDS;gene=bhsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226293.1;locus_tag=NLI98_RS15660;product=multiple stress resistance protein BhsA;protein_id=WP_002900788.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3211594 3211749 . + . ID=gene-NLI98_RS15665;Name=NLI98_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15665;old_locus_tag=NLI98_15660 NZ_CP100601.1 Protein Homology CDS 3211594 3211749 . + 0 ID=cds-WP_032414775.1;Parent=gene-NLI98_RS15665;Dbxref=Genbank:WP_032414775.1;Name=WP_032414775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226292.1;locus_tag=NLI98_RS15665;product=hypothetical protein;protein_id=WP_032414775.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3211746 3212381 . + . ID=gene-NLI98_RS15670;Name=NLI98_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15670;old_locus_tag=NLI98_15665 NZ_CP100601.1 Protein Homology CDS 3211746 3212381 . + 0 ID=cds-WP_004211818.1;Parent=gene-NLI98_RS15670;Dbxref=Genbank:WP_004211818.1;Name=WP_004211818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004224105.1;locus_tag=NLI98_RS15670;product=TetR/AcrR family transcriptional regulator;protein_id=WP_004211818.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3212434 3212556 . - . ID=gene-NLI98_RS15675;Name=NLI98_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15675;old_locus_tag=NLI98_15670 NZ_CP100601.1 Protein Homology CDS 3212434 3212556 . - 0 ID=cds-WP_004140642.1;Parent=gene-NLI98_RS15675;Dbxref=Genbank:WP_004140642.1;Name=WP_004140642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226290.1;locus_tag=NLI98_RS15675;product=hypothetical protein;protein_id=WP_004140642.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3212625 3214814 . + . ID=gene-NLI98_RS15680;Name=NLI98_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15680;old_locus_tag=NLI98_15675 NZ_CP100601.1 Protein Homology CDS 3212625 3214814 . + 0 ID=cds-WP_023282361.1;Parent=gene-NLI98_RS15680;Dbxref=Genbank:WP_023282361.1;Name=WP_023282361.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226287.1;locus_tag=NLI98_RS15680;product=TonB-dependent siderophore receptor;protein_id=WP_023282361.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3214872 3215411 . - . ID=gene-NLI98_RS15685;Name=NLI98_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15685;old_locus_tag=NLI98_15680 NZ_CP100601.1 Protein Homology CDS 3214872 3215411 . - 0 ID=cds-WP_172676891.1;Parent=gene-NLI98_RS15685;Dbxref=Genbank:WP_172676891.1;Name=WP_172676891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226286.1;locus_tag=NLI98_RS15685;product=glycine zipper 2TM domain-containing protein;protein_id=WP_172676891.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3215606 3216910 . - . ID=gene-NLI98_RS15690;Name=NLI98_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15690;old_locus_tag=NLI98_15685 NZ_CP100601.1 Protein Homology CDS 3215606 3216910 . - 0 ID=cds-WP_002900778.1;Parent=gene-NLI98_RS15690;Dbxref=Genbank:WP_002900778.1;Name=WP_002900778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384716.1;locus_tag=NLI98_RS15690;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_002900778.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3217156 3217698 . - . ID=gene-NLI98_RS15695;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=NLI98_RS15695;old_locus_tag=NLI98_15690 NZ_CP100601.1 Protein Homology CDS 3217156 3217698 . - 0 ID=cds-WP_002900775.1;Parent=gene-NLI98_RS15695;Dbxref=Genbank:WP_002900775.1;Name=WP_002900775.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126033.1;locus_tag=NLI98_RS15695;product=alpha/beta hydrolase YcfP;protein_id=WP_002900775.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3217734 3218744 . - . ID=gene-NLI98_RS15700;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=NLI98_RS15700;old_locus_tag=NLI98_15695 NZ_CP100601.1 Protein Homology CDS 3217734 3218744 . - 0 ID=cds-WP_004147935.1;Parent=gene-NLI98_RS15700;Dbxref=Genbank:WP_004147935.1;Name=WP_004147935.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226283.1;locus_tag=NLI98_RS15700;product=beta-N-acetylhexosaminidase;protein_id=WP_004147935.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3218768 3219595 . - . ID=gene-NLI98_RS15705;Name=thiK;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=NLI98_RS15705;old_locus_tag=NLI98_15700 NZ_CP100601.1 Protein Homology CDS 3218768 3219595 . - 0 ID=cds-WP_020316860.1;Parent=gene-NLI98_RS15705;Dbxref=Genbank:WP_020316860.1;Name=WP_020316860.1;Ontology_term=GO:0006772,GO:0016310,GO:0019165;gbkey=CDS;gene=thiK;go_function=thiamine kinase activity|0019165||IEA;go_process=thiamine metabolic process|0006772||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226282.1;locus_tag=NLI98_RS15705;product=thiamine kinase;protein_id=WP_020316860.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3219576 3220214 . - . ID=gene-NLI98_RS15710;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=protein_coding;locus_tag=NLI98_RS15710;old_locus_tag=NLI98_15705 NZ_CP100601.1 Protein Homology CDS 3219576 3220214 . - 0 ID=cds-WP_165453296.1;Parent=gene-NLI98_RS15710;Dbxref=Genbank:WP_165453296.1;Name=WP_165453296.1;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226281.1;locus_tag=NLI98_RS15710;product=penicillin-binding protein activator LpoB;protein_id=WP_165453296.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3220236 3220610 . - . ID=gene-NLI98_RS15715;Name=NLI98_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15715;old_locus_tag=NLI98_15710 NZ_CP100601.1 Protein Homology CDS 3220236 3220610 . - 0 ID=cds-WP_002900683.1;Parent=gene-NLI98_RS15715;Dbxref=Genbank:WP_002900683.1;Name=WP_002900683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002900683.1;locus_tag=NLI98_RS15715;product=YcfL family protein;protein_id=WP_002900683.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3220615 3220971 . - . ID=gene-NLI98_RS15720;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=NLI98_RS15720;old_locus_tag=NLI98_15715 NZ_CP100601.1 Protein Homology CDS 3220615 3220971 . - 0 ID=cds-WP_002900681.1;Parent=gene-NLI98_RS15720;Dbxref=Genbank:WP_002900681.1;Name=WP_002900681.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226279.1;locus_tag=NLI98_RS15720;product=purine nucleoside phosphoramidase;protein_id=WP_002900681.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3221233 3222666 . - . ID=gene-NLI98_RS15725;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=NLI98_RS15725;old_locus_tag=NLI98_15720 NZ_CP100601.1 Protein Homology CDS 3221233 3222666 . - 0 ID=cds-WP_002900680.1;Parent=gene-NLI98_RS15725;Dbxref=Genbank:WP_002900680.1;Name=WP_002900680.1;Ontology_term=GO:0009401,GO:1904659,GO:0005355,GO:0008982;gbkey=CDS;gene=ptsG;go_function=glucose transmembrane transporter activity|0005355||IEA,protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226278.1;locus_tag=NLI98_RS15725;product=PTS glucose transporter subunit IIBC;protein_id=WP_002900680.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3222963 3223757 . - . ID=gene-NLI98_RS15730;Name=NLI98_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15730;old_locus_tag=NLI98_15725 NZ_CP100601.1 Protein Homology CDS 3222963 3223757 . - 0 ID=cds-WP_004140680.1;Parent=gene-NLI98_RS15730;Dbxref=Genbank:WP_004140680.1;Name=WP_004140680.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226277.1;locus_tag=NLI98_RS15730;product=metal-dependent hydrolase;protein_id=WP_004140680.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3223768 3224772 . - . ID=gene-NLI98_RS15735;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=NLI98_RS15735;old_locus_tag=NLI98_15730 NZ_CP100601.1 Protein Homology CDS 3223768 3224772 . - 0 ID=cds-WP_088498116.1;Parent=gene-NLI98_RS15735;Dbxref=Genbank:WP_088498116.1;Name=WP_088498116.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226276.1;locus_tag=NLI98_RS15735;product=DNA polymerase III subunit delta';protein_id=WP_088498116.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3224769 3225410 . - . ID=gene-NLI98_RS15740;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=NLI98_RS15740;old_locus_tag=NLI98_15735 NZ_CP100601.1 Protein Homology CDS 3224769 3225410 . - 0 ID=cds-WP_002900674.1;Parent=gene-NLI98_RS15740;Dbxref=Genbank:WP_002900674.1;Name=WP_002900674.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226275.1;locus_tag=NLI98_RS15740;product=dTMP kinase;protein_id=WP_002900674.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3225400 3226422 . - . ID=gene-NLI98_RS15745;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=NLI98_RS15745;old_locus_tag=NLI98_15740 NZ_CP100601.1 Protein Homology CDS 3225400 3226422 . - 0 ID=cds-WP_004176577.1;Parent=gene-NLI98_RS15745;Dbxref=Genbank:WP_004176577.1;Name=WP_004176577.1;gbkey=CDS;gene=yceG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226274.1;locus_tag=NLI98_RS15745;product=cell division protein YceG;protein_id=WP_004176577.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3226424 3227233 . - . ID=gene-NLI98_RS15750;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=NLI98_RS15750;old_locus_tag=NLI98_15745 NZ_CP100601.1 Protein Homology CDS 3226424 3227233 . - 0 ID=cds-WP_002900669.1;Parent=gene-NLI98_RS15750;Dbxref=Genbank:WP_002900669.1;Name=WP_002900669.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226273.1;locus_tag=NLI98_RS15750;product=aminodeoxychorismate lyase;protein_id=WP_002900669.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3227359 3228600 . - . ID=gene-NLI98_RS15755;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=NLI98_RS15755;old_locus_tag=NLI98_15750 NZ_CP100601.1 Protein Homology CDS 3227359 3228600 . - 0 ID=cds-WP_002900666.1;Parent=gene-NLI98_RS15755;Dbxref=Genbank:WP_002900666.1;Name=WP_002900666.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309500.1;locus_tag=NLI98_RS15755;product=beta-ketoacyl-ACP synthase II;protein_id=WP_002900666.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3228690 3228926 . - . ID=gene-NLI98_RS15760;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=NLI98_RS15760;old_locus_tag=NLI98_15755 NZ_CP100601.1 Protein Homology CDS 3228690 3228926 . - 0 ID=cds-WP_000103754.1;Parent=gene-NLI98_RS15760;Dbxref=Genbank:WP_000103754.1;Name=WP_000103754.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535861.1;locus_tag=NLI98_RS15760;product=acyl carrier protein;protein_id=WP_000103754.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3229137 3229871 . - . ID=gene-NLI98_RS15765;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=NLI98_RS15765;old_locus_tag=NLI98_15760 NZ_CP100601.1 Protein Homology CDS 3229137 3229871 . - 0 ID=cds-WP_002899294.1;Parent=gene-NLI98_RS15765;Dbxref=Genbank:WP_002899294.1;Name=WP_002899294.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=NLI98_RS15765;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_002899294.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3229884 3230813 . - . ID=gene-NLI98_RS15770;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=NLI98_RS15770;old_locus_tag=NLI98_15765 NZ_CP100601.1 Protein Homology CDS 3229884 3230813 . - 0 ID=cds-WP_002899289.1;Parent=gene-NLI98_RS15770;Dbxref=Genbank:WP_002899289.1;Name=WP_002899289.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226269.1;locus_tag=NLI98_RS15770;product=ACP S-malonyltransferase;protein_id=WP_002899289.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3230829 3231782 . - . ID=gene-NLI98_RS15775;Name=NLI98_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15775;old_locus_tag=NLI98_15770 NZ_CP100601.1 Protein Homology CDS 3230829 3231782 . - 0 ID=cds-WP_002899288.1;Parent=gene-NLI98_RS15775;Dbxref=Genbank:WP_002899288.1;Name=WP_002899288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129019.1;locus_tag=NLI98_RS15775;product=ketoacyl-ACP synthase III;protein_id=WP_002899288.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3231836 3232933 . - . ID=gene-NLI98_RS15780;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=NLI98_RS15780;old_locus_tag=NLI98_15775 NZ_CP100601.1 Protein Homology CDS 3231836 3232933 . - 0 ID=cds-WP_004224085.1;Parent=gene-NLI98_RS15780;Dbxref=Genbank:WP_004224085.1;Name=WP_004224085.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542244.1;locus_tag=NLI98_RS15780;product=phosphate acyltransferase PlsX;protein_id=WP_004224085.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3233137 3233310 . - . ID=gene-NLI98_RS15785;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=NLI98_RS15785;old_locus_tag=NLI98_15780 NZ_CP100601.1 Protein Homology CDS 3233137 3233310 . - 0 ID=cds-WP_000290724.1;Parent=gene-NLI98_RS15785;Dbxref=Genbank:WP_000290724.1;Name=WP_000290724.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125993.1;locus_tag=NLI98_RS15785;product=50S ribosomal protein L32;protein_id=WP_000290724.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3233327 3233848 . - . ID=gene-NLI98_RS15790;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=NLI98_RS15790;old_locus_tag=NLI98_15785 NZ_CP100601.1 Protein Homology CDS 3233327 3233848 . - 0 ID=cds-WP_002899276.1;Parent=gene-NLI98_RS15790;Dbxref=Genbank:WP_002899276.1;Name=WP_002899276.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001174481.1;locus_tag=NLI98_RS15790;product=23S rRNA accumulation protein YceD;protein_id=WP_002899276.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3233990 3234574 . + . ID=gene-NLI98_RS15795;Name=NLI98_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15795;old_locus_tag=NLI98_15790 NZ_CP100601.1 Protein Homology CDS 3233990 3234574 . + 0 ID=cds-WP_002899273.1;Parent=gene-NLI98_RS15795;Dbxref=Genbank:WP_002899273.1;Name=WP_002899273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226264.1;locus_tag=NLI98_RS15795;product=Maf-like protein;protein_id=WP_002899273.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3234612 3235565 . - . ID=gene-NLI98_RS15800;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=NLI98_RS15800;old_locus_tag=NLI98_15795 NZ_CP100601.1 Protein Homology CDS 3234612 3235565 . - 0 ID=cds-WP_002899271.1;Parent=gene-NLI98_RS15800;Dbxref=Genbank:WP_002899271.1;Name=WP_002899271.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460157.1;locus_tag=NLI98_RS15800;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_002899271.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3236265 3239498 . + . ID=gene-NLI98_RS15805;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=NLI98_RS15805;old_locus_tag=NLI98_15800 NZ_CP100601.1 Protein Homology CDS 3236265 3239498 . + 0 ID=cds-WP_023284941.1;Parent=gene-NLI98_RS15805;Dbxref=Genbank:WP_023284941.1;Name=WP_023284941.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152941.1;locus_tag=NLI98_RS15805;product=ribonuclease E;protein_id=WP_023284941.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3239537 3240565 . - . ID=gene-NLI98_RS15810;Name=NLI98_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15810;old_locus_tag=NLI98_15805 NZ_CP100601.1 Protein Homology CDS 3239537 3240565 . - 0 ID=cds-WP_004218670.1;Parent=gene-NLI98_RS15810;Dbxref=Genbank:WP_004218670.1;Name=WP_004218670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226260.1;locus_tag=NLI98_RS15810;product=LysR family transcriptional regulator;protein_id=WP_004218670.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3240582 3241796 . + . ID=gene-NLI98_RS15815;Name=NLI98_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15815;old_locus_tag=NLI98_15810 NZ_CP100601.1 Protein Homology CDS 3240582 3241796 . + 0 ID=cds-WP_004176581.1;Parent=gene-NLI98_RS15815;Dbxref=Genbank:WP_004176581.1;Name=WP_004176581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226259.1;locus_tag=NLI98_RS15815;product=MFS transporter;protein_id=WP_004176581.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3241850 3243385 . - . ID=gene-NLI98_RS15820;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=NLI98_RS15820;old_locus_tag=NLI98_15815 NZ_CP100601.1 Protein Homology CDS 3241850 3243385 . - 0 ID=cds-WP_002899104.1;Parent=gene-NLI98_RS15820;Dbxref=Genbank:WP_002899104.1;Name=WP_002899104.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226258.1;locus_tag=NLI98_RS15820;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_002899104.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3243497 3244408 . - . ID=gene-NLI98_RS15825;Name=NLI98_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15825;old_locus_tag=NLI98_15820 NZ_CP100601.1 Protein Homology CDS 3243497 3244408 . - 0 ID=cds-WP_004140718.1;Parent=gene-NLI98_RS15825;Dbxref=Genbank:WP_004140718.1;Name=WP_004140718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226257.1;locus_tag=NLI98_RS15825;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_004140718.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3244424 3245077 . - . ID=gene-NLI98_RS15830;Name=NLI98_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15830;old_locus_tag=NLI98_15825 NZ_CP100601.1 Protein Homology CDS 3244424 3245077 . - 0 ID=cds-WP_004179323.1;Parent=gene-NLI98_RS15830;Dbxref=Genbank:WP_004179323.1;Name=WP_004179323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226256.1;locus_tag=NLI98_RS15830;product=YceH family protein;protein_id=WP_004179323.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3245087 3245671 . - . ID=gene-NLI98_RS15835;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=NLI98_RS15835;old_locus_tag=NLI98_15830 NZ_CP100601.1 Protein Homology CDS 3245087 3245671 . - 0 ID=cds-WP_002899099.1;Parent=gene-NLI98_RS15835;Dbxref=Genbank:WP_002899099.1;Name=WP_002899099.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460138.1;locus_tag=NLI98_RS15835;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_002899099.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3245901 3247109 . + . ID=gene-NLI98_RS15840;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=NLI98_RS15840;old_locus_tag=NLI98_15835 NZ_CP100601.1 Protein Homology CDS 3245901 3247109 . + 0 ID=cds-WP_002899096.1;Parent=gene-NLI98_RS15840;Dbxref=Genbank:WP_002899096.1;Name=WP_002899096.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226254.1;locus_tag=NLI98_RS15840;product=multidrug efflux MFS transporter MdtH;protein_id=WP_002899096.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3247223 3247783 . + . ID=gene-NLI98_RS15845;Name=NLI98_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15845;old_locus_tag=NLI98_15840 NZ_CP100601.1 Protein Homology CDS 3247223 3247783 . + 0 ID=cds-WP_004150824.1;Parent=gene-NLI98_RS15845;Dbxref=Genbank:WP_004150824.1;Name=WP_004150824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226253.1;locus_tag=NLI98_RS15845;product=lipoprotein;protein_id=WP_004150824.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3247909 3248955 . + . ID=gene-NLI98_RS15850;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=NLI98_RS15850;old_locus_tag=NLI98_15845 NZ_CP100601.1 Protein Homology CDS 3247909 3248955 . + 0 ID=cds-WP_004176586.1;Parent=gene-NLI98_RS15850;Dbxref=Genbank:WP_004176586.1;Name=WP_004176586.1;Ontology_term=GO:0009220,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415580.1;locus_tag=NLI98_RS15850;product=dihydroorotase;protein_id=WP_004176586.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3249028 3249279 . + . ID=gene-NLI98_RS15855;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=NLI98_RS15855;old_locus_tag=NLI98_15850 NZ_CP100601.1 Protein Homology CDS 3249028 3249279 . + 0 ID=cds-WP_032419834.1;Parent=gene-NLI98_RS15855;Dbxref=Genbank:WP_032419834.1;Name=WP_032419834.1;gbkey=CDS;gene=dinI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226250.1;locus_tag=NLI98_RS15855;product=DNA damage-inducible protein I;protein_id=WP_032419834.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3249582 3249836 . + . ID=gene-NLI98_RS15860;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=NLI98_RS15860;old_locus_tag=NLI98_15855 NZ_CP100601.1 Protein Homology CDS 3249582 3249836 . + 0 ID=cds-WP_002898992.1;Parent=gene-NLI98_RS15860;Dbxref=Genbank:WP_002898992.1;Name=WP_002898992.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226249.1;locus_tag=NLI98_RS15860;product=biofilm formation regulator BssS;protein_id=WP_002898992.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3249962 3251080 . + . ID=gene-NLI98_RS15865;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=NLI98_RS15865;old_locus_tag=NLI98_15860 NZ_CP100601.1 Protein Homology CDS 3249962 3251080 . + 0 ID=cds-WP_064278937.1;Parent=gene-NLI98_RS15865;Dbxref=Genbank:WP_064278937.1;Name=WP_064278937.1;Ontology_term=GO:0050131;gbkey=CDS;gene=solA;go_function=N-methyl-L-amino-acid oxidase activity|0050131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226248.1;locus_tag=NLI98_RS15865;product=N-methyl-L-tryptophan oxidase;protein_id=WP_064278937.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3251152 3251265 . + . ID=gene-NLI98_RS15870;Name=NLI98_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15870;old_locus_tag=NLI98_15865 NZ_CP100601.1 Protein Homology CDS 3251152 3251265 . + 0 ID=cds-WP_016530426.1;Parent=gene-NLI98_RS15870;Dbxref=Genbank:WP_016530426.1;Name=WP_016530426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226247.1;locus_tag=NLI98_RS15870;product=YceO family protein;protein_id=WP_016530426.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3251251 3252315 . - . ID=gene-NLI98_RS15875;Name=NLI98_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15875;old_locus_tag=NLI98_15870 NZ_CP100601.1 Protein Homology CDS 3251251 3252315 . - 0 ID=cds-WP_002898987.1;Parent=gene-NLI98_RS15875;Dbxref=Genbank:WP_002898987.1;Name=WP_002898987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226246.1;locus_tag=NLI98_RS15875;product=rhodanese-related sulfurtransferase;protein_id=WP_002898987.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3252521 3253441 . + . ID=gene-NLI98_RS15880;Name=NLI98_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15880;old_locus_tag=NLI98_15875 NZ_CP100601.1 Protein Homology CDS 3252521 3253441 . + 0 ID=cds-WP_088498115.1;Parent=gene-NLI98_RS15880;Dbxref=Genbank:WP_088498115.1;Name=WP_088498115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226244.1;locus_tag=NLI98_RS15880;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee;protein_id=WP_088498115.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3253613 3254839 . + . ID=gene-NLI98_RS15885;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=NLI98_RS15885;old_locus_tag=NLI98_15880 NZ_CP100601.1 Protein Homology CDS 3253613 3254839 . + 0 ID=cds-WP_002898984.1;Parent=gene-NLI98_RS15885;Dbxref=Genbank:WP_002898984.1;Name=WP_002898984.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226243.1;locus_tag=NLI98_RS15885;product=multidrug efflux MFS transporter MdtG;protein_id=WP_002898984.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3254931 3255317 . + . ID=gene-NLI98_RS15890;Name=NLI98_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15890;old_locus_tag=NLI98_15885 NZ_CP100601.1 Protein Homology CDS 3254931 3255317 . + 0 ID=cds-WP_002898981.1;Parent=gene-NLI98_RS15890;Dbxref=Genbank:WP_002898981.1;Name=WP_002898981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226242.1;locus_tag=NLI98_RS15890;product=MysB family protein;protein_id=WP_002898981.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3255318 3255545 . - . ID=gene-NLI98_RS15895;Name=NLI98_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15895;old_locus_tag=NLI98_15890 NZ_CP100601.1 Protein Homology CDS 3255318 3255545 . - 0 ID=cds-WP_002898978.1;Parent=gene-NLI98_RS15895;Dbxref=Genbank:WP_002898978.1;Name=WP_002898978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226241.1;locus_tag=NLI98_RS15895;product=YceK/YidQ family lipoprotein;protein_id=WP_002898978.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3255612 3258140 . - . ID=gene-NLI98_RS15900;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=NLI98_RS15900;old_locus_tag=NLI98_15895 NZ_CP100601.1 Protein Homology CDS 3255612 3258140 . - 0 ID=cds-WP_002898967.1;Parent=gene-NLI98_RS15900;Dbxref=Genbank:WP_002898967.1;Name=WP_002898967.1;Ontology_term=GO:0016758;gbkey=CDS;gene=mdoH;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226240.1;locus_tag=NLI98_RS15900;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_002898967.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3258133 3259686 . - . ID=gene-NLI98_RS15905;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=NLI98_RS15905;old_locus_tag=NLI98_15900 NZ_CP100601.1 Protein Homology CDS 3258133 3259686 . - 0 ID=cds-WP_004140751.1;Parent=gene-NLI98_RS15905;Dbxref=Genbank:WP_004140751.1;Name=WP_004140751.1;gbkey=CDS;gene=mdoG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226239.1;locus_tag=NLI98_RS15905;product=glucans biosynthesis protein MdoG;protein_id=WP_004140751.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3259938 3261098 . + . ID=gene-NLI98_RS15910;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=NLI98_RS15910;old_locus_tag=NLI98_15905 NZ_CP100601.1 Protein Homology CDS 3259938 3261098 . + 0 ID=cds-WP_048289155.1;Parent=gene-NLI98_RS15910;Dbxref=Genbank:WP_048289155.1;Name=WP_048289155.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdoC;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226238.1;locus_tag=NLI98_RS15910;product=glucans biosynthesis protein MdoC;protein_id=WP_048289155.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3261133 3261726 . - . ID=gene-NLI98_RS15915;Name=NLI98_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15915;old_locus_tag=NLI98_15910 NZ_CP100601.1 Protein Homology CDS 3261133 3261726 . - 0 ID=cds-WP_004179313.1;Parent=gene-NLI98_RS15915;Dbxref=Genbank:WP_004179313.1;Name=WP_004179313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226237.1;locus_tag=NLI98_RS15915;product=TetR/AcrR family transcriptional regulator;protein_id=WP_004179313.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3261793 3262320 . - . ID=gene-NLI98_RS15920;Name=ymdB;gbkey=Gene;gene=ymdB;gene_biotype=protein_coding;locus_tag=NLI98_RS15920;old_locus_tag=NLI98_15915 NZ_CP100601.1 Protein Homology CDS 3261793 3262320 . - 0 ID=cds-WP_048289154.1;Parent=gene-NLI98_RS15920;Dbxref=Genbank:WP_048289154.1;Name=WP_048289154.1;Ontology_term=GO:0003824;gbkey=CDS;gene=ymdB;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226236.1;locus_tag=NLI98_RS15920;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_048289154.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3262470 3262952 . - . ID=gene-NLI98_RS15925;Name=NLI98_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15925;old_locus_tag=NLI98_15920 NZ_CP100601.1 Protein Homology CDS 3262470 3262952 . - 0 ID=cds-WP_004191006.1;Parent=gene-NLI98_RS15925;Dbxref=Genbank:WP_004191006.1;Name=WP_004191006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016531954.1;locus_tag=NLI98_RS15925;product=DUF1097 domain-containing protein;protein_id=WP_004191006.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3263056 3263610 . - . ID=gene-NLI98_RS15930;Name=NLI98_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15930;old_locus_tag=NLI98_15925 NZ_CP100601.1 Protein Homology CDS 3263056 3263610 . - 0 ID=cds-WP_004140758.1;Parent=gene-NLI98_RS15930;Dbxref=Genbank:WP_004140758.1;Name=WP_004140758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001921.1;locus_tag=NLI98_RS15930;product=molecular chaperone;protein_id=WP_004140758.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3263633 3264370 . - . ID=gene-NLI98_RS15935;Name=NLI98_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15935;old_locus_tag=NLI98_15930 NZ_CP100601.1 Protein Homology CDS 3263633 3264370 . - 0 ID=cds-WP_004140764.1;Parent=gene-NLI98_RS15935;Dbxref=Genbank:WP_004140764.1;Name=WP_004140764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226233.1;locus_tag=NLI98_RS15935;product=phosphatase;protein_id=WP_004140764.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3264459 3265397 . - . ID=gene-NLI98_RS15940;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=NLI98_RS15940;old_locus_tag=NLI98_15935 NZ_CP100601.1 Protein Homology CDS 3264459 3265397 . - 0 ID=cds-WP_004147901.1;Parent=gene-NLI98_RS15940;Dbxref=Genbank:WP_004147901.1;Name=WP_004147901.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase activity|0016618||IEA,glyoxylate reductase (NADP+) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226232.1;locus_tag=NLI98_RS15940;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_004147901.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3265666 3265753 . + . ID=gene-NLI98_RS15945;Name=NLI98_RS15945;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS15945;old_locus_tag=NLI98_15940 NZ_CP100601.1 tRNAscan-SE tRNA 3265666 3265753 . + . ID=rna-NLI98_RS15945;Parent=gene-NLI98_RS15945;anticodon=(pos:3265700..3265702);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS15945;product=tRNA-Ser NZ_CP100601.1 tRNAscan-SE exon 3265666 3265753 . + . ID=exon-NLI98_RS15945-1;Parent=rna-NLI98_RS15945;anticodon=(pos:3265700..3265702);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS15945;product=tRNA-Ser NZ_CP100601.1 RefSeq gene 3265797 3265934 . + . ID=gene-NLI98_RS15950;Name=NLI98_RS15950;gbkey=Gene;gene_biotype=ncRNA;locus_tag=NLI98_RS15950;old_locus_tag=NLI98_15945 NZ_CP100601.1 cmsearch ncRNA 3265797 3265934 . + . ID=rna-NLI98_RS15950;Parent=gene-NLI98_RS15950;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS15950;product=RtT sRNA NZ_CP100601.1 cmsearch exon 3265797 3265934 . + . ID=exon-NLI98_RS15950-1;Parent=rna-NLI98_RS15950;Dbxref=RFAM:RF00391;Note=rtT sRNA%2C processed from tyrT transcript;gbkey=ncRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS15950;product=RtT sRNA NZ_CP100601.1 RefSeq gene 3266030 3266935 . - . ID=gene-NLI98_RS15955;Name=NLI98_RS15955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15955;old_locus_tag=NLI98_15950 NZ_CP100601.1 Protein Homology CDS 3266030 3266935 . - 0 ID=cds-WP_004179309.1;Parent=gene-NLI98_RS15955;Dbxref=Genbank:WP_004179309.1;Name=WP_004179309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226231.1;locus_tag=NLI98_RS15955;product=LysR family transcriptional regulator;protein_id=WP_004179309.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3267050 3267910 . + . ID=gene-NLI98_RS15960;Name=NLI98_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15960;old_locus_tag=NLI98_15955 NZ_CP100601.1 Protein Homology CDS 3267050 3267910 . + 0 ID=cds-WP_004199757.1;Parent=gene-NLI98_RS15960;Dbxref=Genbank:WP_004199757.1;Name=WP_004199757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226230.1;locus_tag=NLI98_RS15960;product=pirin family protein;protein_id=WP_004199757.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3267929 3268606 . + . ID=gene-NLI98_RS15965;Name=NLI98_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15965;old_locus_tag=NLI98_15960 NZ_CP100601.1 Protein Homology CDS 3267929 3268606 . + 0 ID=cds-WP_002898927.1;Parent=gene-NLI98_RS15965;Dbxref=Genbank:WP_002898927.1;Name=WP_002898927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226229.1;locus_tag=NLI98_RS15965;product=isochorismatase family protein;protein_id=WP_002898927.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3268752 3268839 . + . ID=gene-NLI98_RS15970;Name=NLI98_RS15970;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS15970;old_locus_tag=NLI98_15965 NZ_CP100601.1 tRNAscan-SE tRNA 3268752 3268839 . + . ID=rna-NLI98_RS15970;Parent=gene-NLI98_RS15970;anticodon=(pos:3268786..3268788);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS15970;product=tRNA-Ser NZ_CP100601.1 tRNAscan-SE exon 3268752 3268839 . + . ID=exon-NLI98_RS15970-1;Parent=rna-NLI98_RS15970;anticodon=(pos:3268786..3268788);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS15970;product=tRNA-Ser NZ_CP100601.1 RefSeq gene 3270017 3270805 . - . ID=gene-NLI98_RS15975;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=NLI98_RS15975;old_locus_tag=NLI98_15970 NZ_CP100601.1 Protein Homology CDS 3270017 3270805 . - 0 ID=cds-WP_002898923.1;Parent=gene-NLI98_RS15975;Dbxref=Genbank:WP_002898923.1;Name=WP_002898923.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871266.1;locus_tag=NLI98_RS15975;product=phosphate starvation-inducible protein PhoH;protein_id=WP_002898923.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3271310 3272593 . - . ID=gene-NLI98_RS15980;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=NLI98_RS15980;old_locus_tag=NLI98_15975 NZ_CP100601.1 Protein Homology CDS 3271310 3272593 . - 0 ID=cds-WP_004147893.1;Parent=gene-NLI98_RS15980;Dbxref=Genbank:WP_004147893.1;Name=WP_004147893.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226225.1;locus_tag=NLI98_RS15980;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_004147893.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3272598 3273725 . - . ID=gene-NLI98_RS15985;Name=NLI98_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15985;old_locus_tag=NLI98_15980 NZ_CP100601.1 Protein Homology CDS 3272598 3273725 . - 0 ID=cds-WP_004157740.1;Parent=gene-NLI98_RS15985;Dbxref=Genbank:WP_004157740.1;Name=WP_004157740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226224.1;locus_tag=NLI98_RS15985;product=iron uptake system protein EfeO;protein_id=WP_004157740.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3273777 3274607 . - . ID=gene-NLI98_RS15990;Name=NLI98_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15990;old_locus_tag=NLI98_15985 NZ_CP100601.1 Protein Homology CDS 3273777 3274607 . - 0 ID=cds-WP_002898913.1;Parent=gene-NLI98_RS15990;Dbxref=Genbank:WP_002898913.1;Name=WP_002898913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226223.1;locus_tag=NLI98_RS15990;product=FTR1 family protein;protein_id=WP_002898913.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3274878 3276062 . + . ID=gene-NLI98_RS15995;Name=NLI98_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS15995;old_locus_tag=NLI98_15990 NZ_CP100601.1 Protein Homology CDS 3274878 3276062 . + 0 ID=cds-WP_002898911.1;Parent=gene-NLI98_RS15995;Dbxref=Genbank:WP_002898911.1;Name=WP_002898911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946978.1;locus_tag=NLI98_RS15995;product=nucleoside transporter;protein_id=WP_002898911.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3276094 3276528 . - . ID=gene-NLI98_RS16000;Name=NLI98_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16000;old_locus_tag=NLI98_15995 NZ_CP100601.1 Protein Homology CDS 3276094 3276528 . - 0 ID=cds-WP_023316658.1;Parent=gene-NLI98_RS16000;Dbxref=Genbank:WP_023316658.1;Name=WP_023316658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204513.1;locus_tag=NLI98_RS16000;product=DUF3574 domain-containing protein;protein_id=WP_023316658.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3276663 3278171 . - . ID=gene-NLI98_RS16005;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=NLI98_RS16005;old_locus_tag=NLI98_16000 NZ_CP100601.1 Protein Homology CDS 3276663 3278171 . - 0 ID=cds-WP_004147889.1;Parent=gene-NLI98_RS16005;Dbxref=Genbank:WP_004147889.1;Name=WP_004147889.1;Ontology_term=GO:0006814,GO:0015824,GO:0055085,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226219.1;locus_tag=NLI98_RS16005;product=sodium/proline symporter PutP;protein_id=WP_004147889.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3278593 3282555 . + . ID=gene-NLI98_RS16010;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=NLI98_RS16010;old_locus_tag=NLI98_16005 NZ_CP100601.1 Protein Homology CDS 3278593 3282555 . + 0 ID=cds-WP_064278941.1;Parent=gene-NLI98_RS16010;Dbxref=Genbank:WP_064278941.1;Name=WP_064278941.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309287.1;locus_tag=NLI98_RS16010;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_064278941.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3282741 3283136 . + . ID=gene-NLI98_RS16015;Name=NLI98_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16015;old_locus_tag=NLI98_16010 NZ_CP100601.1 Protein Homology CDS 3282741 3283136 . + 0 ID=cds-WP_002898886.1;Parent=gene-NLI98_RS16015;Dbxref=Genbank:WP_002898886.1;Name=WP_002898886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226216.1;locus_tag=NLI98_RS16015;product=lysozyme inhibitor LprI family protein;protein_id=WP_002898886.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3283133 3283771 . - . ID=gene-NLI98_RS16020;Name=rutR;gbkey=Gene;gene=rutR;gene_biotype=protein_coding;locus_tag=NLI98_RS16020;old_locus_tag=NLI98_16015 NZ_CP100601.1 Protein Homology CDS 3283133 3283771 . - 0 ID=cds-WP_002898883.1;Parent=gene-NLI98_RS16020;Dbxref=Genbank:WP_002898883.1;Name=WP_002898883.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;gene=rutR;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226215.1;locus_tag=NLI98_RS16020;product=HTH-type transcriptional regulator RutR;protein_id=WP_002898883.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3284056 3285147 . + . ID=gene-NLI98_RS16025;Name=rutA;gbkey=Gene;gene=rutA;gene_biotype=protein_coding;locus_tag=NLI98_RS16025;old_locus_tag=NLI98_16020 NZ_CP100601.1 Protein Homology CDS 3284056 3285147 . + 0 ID=cds-WP_004176608.1;Parent=gene-NLI98_RS16025;Dbxref=Genbank:WP_004176608.1;Name=WP_004176608.1;Ontology_term=GO:0008150,GO:0010181,GO:0016491;gbkey=CDS;gene=rutA;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226214.1;locus_tag=NLI98_RS16025;product=pyrimidine utilization protein A;protein_id=WP_004176608.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3285147 3285857 . + . ID=gene-NLI98_RS16030;Name=rutB;gbkey=Gene;gene=rutB;gene_biotype=protein_coding;locus_tag=NLI98_RS16030;old_locus_tag=NLI98_16025 NZ_CP100601.1 Protein Homology CDS 3285147 3285857 . + 0 ID=cds-WP_004224061.1;Parent=gene-NLI98_RS16030;Dbxref=Genbank:WP_004224061.1;Name=WP_004224061.1;Ontology_term=GO:0016811;gbkey=CDS;gene=rutB;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226213.1;locus_tag=NLI98_RS16030;product=pyrimidine utilization protein B;protein_id=WP_004224061.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3285850 3286242 . + . ID=gene-NLI98_RS16035;Name=rutC;gbkey=Gene;gene=rutC;gene_biotype=protein_coding;locus_tag=NLI98_RS16035;old_locus_tag=NLI98_16030 NZ_CP100601.1 Protein Homology CDS 3285850 3286242 . + 0 ID=cds-WP_002898877.1;Parent=gene-NLI98_RS16035;Dbxref=Genbank:WP_002898877.1;Name=WP_002898877.1;gbkey=CDS;gene=rutC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226212.1;locus_tag=NLI98_RS16035;product=pyrimidine utilization protein C;protein_id=WP_002898877.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3286239 3287042 . + . ID=gene-NLI98_RS16040;Name=rutD;gbkey=Gene;gene=rutD;gene_biotype=protein_coding;locus_tag=NLI98_RS16040;old_locus_tag=NLI98_16035 NZ_CP100601.1 Protein Homology CDS 3286239 3287042 . + 0 ID=cds-WP_088498113.1;Parent=gene-NLI98_RS16040;Dbxref=Genbank:WP_088498113.1;Name=WP_088498113.1;Ontology_term=GO:0006212,GO:0016811;gbkey=CDS;gene=rutD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183620.1;locus_tag=NLI98_RS16040;product=pyrimidine utilization protein D;protein_id=WP_088498113.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3287039 3287629 . + . ID=gene-NLI98_RS16045;Name=NLI98_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16045;old_locus_tag=NLI98_16040 NZ_CP100601.1 Protein Homology CDS 3287039 3287629 . + 0 ID=cds-WP_088498112.1;Parent=gene-NLI98_RS16045;Dbxref=Genbank:WP_088498112.1;Name=WP_088498112.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226209.1;locus_tag=NLI98_RS16045;product=malonic semialdehyde reductase;protein_id=WP_088498112.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3287640 3288134 . + . ID=gene-NLI98_RS16050;Name=rutF;gbkey=Gene;gene=rutF;gene_biotype=protein_coding;locus_tag=NLI98_RS16050;old_locus_tag=NLI98_16045 NZ_CP100601.1 Protein Homology CDS 3287640 3288134 . + 0 ID=cds-WP_029504210.1;Parent=gene-NLI98_RS16050;Dbxref=Genbank:WP_029504210.1;Name=WP_029504210.1;gbkey=CDS;gene=rutF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226208.1;locus_tag=NLI98_RS16050;product=pyrimidine utilization flavin reductase protein F;protein_id=WP_029504210.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3288156 3289478 . + . ID=gene-NLI98_RS16055;Name=rutG;gbkey=Gene;gene=rutG;gene_biotype=protein_coding;locus_tag=NLI98_RS16055;old_locus_tag=NLI98_16050 NZ_CP100601.1 Protein Homology CDS 3288156 3289478 . + 0 ID=cds-WP_004211313.1;Parent=gene-NLI98_RS16055;Dbxref=Genbank:WP_004211313.1;Name=WP_004211313.1;Ontology_term=GO:0006864,GO:0015218,GO:0016020;gbkey=CDS;gene=rutG;go_component=membrane|0016020||IEA;go_function=pyrimidine nucleotide transmembrane transporter activity|0015218||IEA;go_process=pyrimidine nucleotide transport|0006864||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226207.1;locus_tag=NLI98_RS16055;product=pyrimidine utilization transport protein G;protein_id=WP_004211313.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3289691 3290629 . - . ID=gene-NLI98_RS16060;Name=NLI98_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16060;old_locus_tag=NLI98_16055 NZ_CP100601.1 Protein Homology CDS 3289691 3290629 . - 0 ID=cds-WP_088498111.1;Parent=gene-NLI98_RS16060;Dbxref=Genbank:WP_088498111.1;Name=WP_088498111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004141448.1;locus_tag=NLI98_RS16060;product=DMT family transporter;protein_id=WP_088498111.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3290792 3290965 . - . ID=gene-NLI98_RS16065;Name=NLI98_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16065;old_locus_tag=NLI98_16060 NZ_CP100601.1 Protein Homology CDS 3290792 3290965 . - 0 ID=cds-WP_002898708.1;Parent=gene-NLI98_RS16065;Dbxref=Genbank:WP_002898708.1;Name=WP_002898708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036022.1;locus_tag=NLI98_RS16065;product=general stress protein;protein_id=WP_002898708.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3291053 3291184 . + . ID=gene-NLI98_RS16070;Name=NLI98_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16070;old_locus_tag=NLI98_16065 NZ_CP100601.1 Protein Homology CDS 3291053 3291184 . + 0 ID=cds-WP_020323707.1;Parent=gene-NLI98_RS16070;Dbxref=Genbank:WP_020323707.1;Name=WP_020323707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226205.1;locus_tag=NLI98_RS16070;product=hypothetical protein;protein_id=WP_020323707.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3291402 3291998 . + . ID=gene-NLI98_RS16075;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=NLI98_RS16075;old_locus_tag=NLI98_16070 NZ_CP100601.1 Protein Homology CDS 3291402 3291998 . + 0 ID=cds-WP_002898704.1;Parent=gene-NLI98_RS16075;Dbxref=Genbank:WP_002898704.1;Name=WP_002898704.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226204.1;locus_tag=NLI98_RS16075;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_002898704.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3292019 3292246 . + . ID=gene-NLI98_RS16080;Name=NLI98_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16080;old_locus_tag=NLI98_16075 NZ_CP100601.1 Protein Homology CDS 3292019 3292246 . + 0 ID=cds-WP_002898701.1;Parent=gene-NLI98_RS16080;Dbxref=Genbank:WP_002898701.1;Name=WP_002898701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898701.1;locus_tag=NLI98_RS16080;product=YccJ family protein;protein_id=WP_002898701.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3292315 3293562 . - . ID=gene-NLI98_RS16085;Name=agp;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=NLI98_RS16085;old_locus_tag=NLI98_16080 NZ_CP100601.1 Protein Homology CDS 3292315 3293562 . - 0 ID=cds-WP_004183618.1;Parent=gene-NLI98_RS16085;Dbxref=Genbank:WP_004183618.1;Name=WP_004183618.1;gbkey=CDS;gene=agp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191023.1;locus_tag=NLI98_RS16085;product=bifunctional glucose-1-phosphatase/inositol phosphatase;protein_id=WP_004183618.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3293715 3294164 . + . ID=gene-NLI98_RS16090;Name=NLI98_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16090;old_locus_tag=NLI98_16085 NZ_CP100601.1 Protein Homology CDS 3293715 3294164 . + 0 ID=cds-WP_004141456.1;Parent=gene-NLI98_RS16090;Dbxref=Genbank:WP_004141456.1;Name=WP_004141456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226201.1;locus_tag=NLI98_RS16090;product=helix-turn-helix transcriptional regulator;protein_id=WP_004141456.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3294280 3295068 . + . ID=gene-NLI98_RS16095;Name=NLI98_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16095;old_locus_tag=NLI98_16090 NZ_CP100601.1 Protein Homology CDS 3294280 3295068 . + 0 ID=cds-WP_004214503.1;Parent=gene-NLI98_RS16095;Dbxref=Genbank:WP_004214503.1;Name=WP_004214503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226200.1;locus_tag=NLI98_RS16095;product=SDR family oxidoreductase;protein_id=WP_004214503.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3295089 3295310 . - . ID=gene-NLI98_RS16100;Name=NLI98_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16100;old_locus_tag=NLI98_16095 NZ_CP100601.1 Protein Homology CDS 3295089 3295310 . - 0 ID=cds-WP_002898602.1;Parent=gene-NLI98_RS16100;Dbxref=Genbank:WP_002898602.1;Name=WP_002898602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226199.1;locus_tag=NLI98_RS16100;product=hypothetical protein;protein_id=WP_002898602.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3295567 3295689 . + . ID=gene-NLI98_RS16105;Name=NLI98_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16105;old_locus_tag=NLI98_16100 NZ_CP100601.1 Protein Homology CDS 3295567 3295689 . + 0 ID=cds-WP_002898600.1;Parent=gene-NLI98_RS16105;Dbxref=Genbank:WP_002898600.1;Name=WP_002898600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226198.1;locus_tag=NLI98_RS16105;product=small membrane protein;protein_id=WP_002898600.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3295808 3297199 . - . ID=gene-NLI98_RS16110;Name=NLI98_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16110;old_locus_tag=NLI98_16105 NZ_CP100601.1 Protein Homology CDS 3295808 3297199 . - 0 ID=cds-WP_004141463.1;Parent=gene-NLI98_RS16110;Dbxref=Genbank:WP_004141463.1;Name=WP_004141463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226197.1;locus_tag=NLI98_RS16110;product=APC family permease;protein_id=WP_004141463.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3297553 3298974 . - . ID=gene-NLI98_RS16115;Name=NLI98_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16115;old_locus_tag=NLI98_16110 NZ_CP100601.1 Protein Homology CDS 3297553 3298974 . - 0 ID=cds-WP_002898595.1;Parent=gene-NLI98_RS16115;Dbxref=Genbank:WP_002898595.1;Name=WP_002898595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226196.1;locus_tag=NLI98_RS16115;product=glutamine synthetase family protein;protein_id=WP_002898595.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3299200 3299952 . + . ID=gene-NLI98_RS16120;Name=puuD;gbkey=Gene;gene=puuD;gene_biotype=protein_coding;locus_tag=NLI98_RS16120;old_locus_tag=NLI98_16115 NZ_CP100601.1 Protein Homology CDS 3299200 3299952 . + 0 ID=cds-WP_020802183.1;Parent=gene-NLI98_RS16120;Dbxref=Genbank:WP_020802183.1;Name=WP_020802183.1;Ontology_term=GO:0016787;gbkey=CDS;gene=puuD;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226195.1;locus_tag=NLI98_RS16120;product=gamma-glutamyl-gamma-aminobutyrate hydrolase;protein_id=WP_020802183.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3299978 3300535 . + . ID=gene-NLI98_RS16125;Name=puuR;gbkey=Gene;gene=puuR;gene_biotype=protein_coding;locus_tag=NLI98_RS16125;old_locus_tag=NLI98_16120 NZ_CP100601.1 Protein Homology CDS 3299978 3300535 . + 0 ID=cds-WP_002898590.1;Parent=gene-NLI98_RS16125;Dbxref=Genbank:WP_002898590.1;Name=WP_002898590.1;gbkey=CDS;gene=puuR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001464354.1;locus_tag=NLI98_RS16125;product=HTH-type transcriptional regulator PuuR;protein_id=WP_002898590.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3300856 3302343 . + . ID=gene-NLI98_RS16130;Name=puuC;gbkey=Gene;gene=puuC;gene_biotype=protein_coding;locus_tag=NLI98_RS16130;old_locus_tag=NLI98_16125 NZ_CP100601.1 Protein Homology CDS 3300856 3302343 . + 0 ID=cds-WP_023316654.1;Parent=gene-NLI98_RS16130;Dbxref=Genbank:WP_023316654.1;Name=WP_023316654.1;Ontology_term=GO:0016620;gbkey=CDS;gene=puuC;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226192.1;locus_tag=NLI98_RS16130;product=aldehyde dehydrogenase PuuC;protein_id=WP_023316654.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3302346 3303626 . + . ID=gene-NLI98_RS16135;Name=NLI98_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16135;old_locus_tag=NLI98_16130 NZ_CP100601.1 Protein Homology CDS 3302346 3303626 . + 0 ID=cds-WP_002898585.1;Parent=gene-NLI98_RS16135;Dbxref=Genbank:WP_002898585.1;Name=WP_002898585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226191.1;locus_tag=NLI98_RS16135;product=FAD-binding oxidoreductase;protein_id=WP_002898585.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3303623 3304585 . - . ID=gene-NLI98_RS16140;Name=NLI98_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16140;old_locus_tag=NLI98_16135 NZ_CP100601.1 Protein Homology CDS 3303623 3304585 . - 0 ID=cds-WP_264451949.1;Parent=gene-NLI98_RS16140;Dbxref=Genbank:WP_264451949.1;Name=WP_264451949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226190.1;locus_tag=NLI98_RS16140;product=LysR substrate-binding domain-containing protein;protein_id=WP_264451949.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3304668 3305753 . + . ID=gene-NLI98_RS16145;Name=NLI98_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16145;old_locus_tag=NLI98_16140 NZ_CP100601.1 Protein Homology CDS 3304668 3305753 . + 0 ID=cds-WP_004141479.1;Parent=gene-NLI98_RS16145;Dbxref=Genbank:WP_004141479.1;Name=WP_004141479.1;Ontology_term=GO:0046395,GO:0009027;gbkey=CDS;go_function=tartrate dehydrogenase activity|0009027||IEA;go_process=carboxylic acid catabolic process|0046395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012068535.1;locus_tag=NLI98_RS16145;product=tartrate dehydrogenase;protein_id=WP_004141479.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3306202 3307809 . + . ID=gene-NLI98_RS16150;Name=NLI98_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16150;old_locus_tag=NLI98_16145 NZ_CP100601.1 Protein Homology CDS 3306202 3307809 . + 0 ID=cds-WP_022615490.1;Parent=gene-NLI98_RS16150;Dbxref=Genbank:WP_022615490.1;Name=WP_022615490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226187.1;locus_tag=NLI98_RS16150;product=BCCT family transporter;protein_id=WP_022615490.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3307846 3308970 . + . ID=gene-NLI98_RS16155;Name=NLI98_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16155;old_locus_tag=NLI98_16150 NZ_CP100601.1 Protein Homology CDS 3307846 3308970 . + 0 ID=cds-WP_002898571.1;Parent=gene-NLI98_RS16155;Dbxref=Genbank:WP_002898571.1;Name=WP_002898571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226186.1;locus_tag=NLI98_RS16155;product=ring-hydroxylating oxygenase subunit alpha;protein_id=WP_002898571.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3308989 3310437 . + . ID=gene-NLI98_RS16160;Name=NLI98_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16160;old_locus_tag=NLI98_16155 NZ_CP100601.1 Protein Homology CDS 3308989 3310437 . + 0 ID=cds-WP_264451950.1;Parent=gene-NLI98_RS16160;Dbxref=Genbank:WP_264451950.1;Name=WP_264451950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226185.1;locus_tag=NLI98_RS16160;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_264451950.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3310495 3311460 . + . ID=gene-NLI98_RS16165;Name=NLI98_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16165;old_locus_tag=NLI98_16160 NZ_CP100601.1 Protein Homology CDS 3310495 3311460 . + 0 ID=cds-WP_064278944.1;Parent=gene-NLI98_RS16165;Dbxref=Genbank:WP_064278944.1;Name=WP_064278944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226184.1;locus_tag=NLI98_RS16165;product=PDR/VanB family oxidoreductase;protein_id=WP_064278944.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3311498 3313999 . - . ID=gene-NLI98_RS16170;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=NLI98_RS16170;old_locus_tag=NLI98_16165 NZ_CP100601.1 Protein Homology CDS 3311498 3313999 . - 0 ID=cds-WP_004179266.1;Parent=gene-NLI98_RS16170;Dbxref=Genbank:WP_004179266.1;Name=WP_004179266.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026278.1;locus_tag=NLI98_RS16170;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_004179266.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3314309 3315385 . + . ID=gene-NLI98_RS16175;Name=NLI98_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16175;old_locus_tag=NLI98_16170 NZ_CP100601.1 Protein Homology CDS 3314309 3315385 . + 0 ID=cds-WP_004183610.1;Parent=gene-NLI98_RS16175;Dbxref=Genbank:WP_004183610.1;Name=WP_004183610.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418384.1;locus_tag=NLI98_RS16175;product=PTS fructose transporter subunit EIIC;protein_id=WP_004183610.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3315406 3315726 . + . ID=gene-NLI98_RS16180;Name=NLI98_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16180;old_locus_tag=NLI98_16175 NZ_CP100601.1 Protein Homology CDS 3315406 3315726 . + 0 ID=cds-WP_004179264.1;Parent=gene-NLI98_RS16180;Dbxref=Genbank:WP_004179264.1;Name=WP_004179264.1;Ontology_term=GO:0009401,GO:0022877;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462993.1;locus_tag=NLI98_RS16180;product=PTS fructose-like transporter subunit IIB;protein_id=WP_004179264.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3315776 3318073 . + . ID=gene-NLI98_RS16185;Name=NLI98_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16185;old_locus_tag=NLI98_16180 NZ_CP100601.1 Protein Homology CDS 3315776 3318073 . + 0 ID=cds-WP_004183609.1;Parent=gene-NLI98_RS16185;Dbxref=Genbank:WP_004183609.1;Name=WP_004183609.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709751.1;locus_tag=NLI98_RS16185;product=formate C-acetyltransferase;protein_id=WP_004183609.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3318039 3318914 . + . ID=gene-NLI98_RS16190;Name=NLI98_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16190;old_locus_tag=NLI98_16185 NZ_CP100601.1 Protein Homology CDS 3318039 3318914 . + 0 ID=cds-WP_004179261.1;Parent=gene-NLI98_RS16190;Dbxref=Genbank:WP_004179261.1;Name=WP_004179261.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705934.1;locus_tag=NLI98_RS16190;product=[formate-C-acetyltransferase]-activating enzyme;protein_id=WP_004179261.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3318930 3319271 . + . ID=gene-NLI98_RS16195;Name=NLI98_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16195;old_locus_tag=NLI98_16190 NZ_CP100601.1 Protein Homology CDS 3318930 3319271 . + 0 ID=cds-WP_004179260.1;Parent=gene-NLI98_RS16195;Dbxref=Genbank:WP_004179260.1;Name=WP_004179260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179260.1;locus_tag=NLI98_RS16195;product=PTS fructose-like transporter subunit IIB;protein_id=WP_004179260.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3319285 3320052 . - . ID=gene-NLI98_RS16200;Name=NLI98_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16200;old_locus_tag=NLI98_16195 NZ_CP100601.1 Protein Homology CDS 3319285 3320052 . - 0 ID=cds-WP_004183607.1;Parent=gene-NLI98_RS16200;Dbxref=Genbank:WP_004183607.1;Name=WP_004183607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201458.1;locus_tag=NLI98_RS16200;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_004183607.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3320314 3321147 . + . ID=gene-NLI98_RS16205;Name=NLI98_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16205;old_locus_tag=NLI98_16200 NZ_CP100601.1 Protein Homology CDS 3320314 3321147 . + 0 ID=cds-WP_088498108.1;Parent=gene-NLI98_RS16205;Dbxref=Genbank:WP_088498108.1;Name=WP_088498108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542286.1;locus_tag=NLI98_RS16205;product=AraC family transcriptional regulator;protein_id=WP_088498108.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3321144 3322064 . - . ID=gene-NLI98_RS16210;Name=NLI98_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16210;old_locus_tag=NLI98_16205 NZ_CP100601.1 Protein Homology CDS 3321144 3322064 . - 0 ID=cds-WP_004183597.1;Parent=gene-NLI98_RS16210;Dbxref=Genbank:WP_004183597.1;Name=WP_004183597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020806235.1;locus_tag=NLI98_RS16210;product=GGDEF domain-containing protein;protein_id=WP_004183597.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3322308 3323336 . - . ID=gene-NLI98_RS16215;Name=NLI98_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16215;old_locus_tag=NLI98_16210 NZ_CP100601.1 Protein Homology CDS 3322308 3323336 . - 0 ID=cds-WP_004179253.1;Parent=gene-NLI98_RS16215;Dbxref=Genbank:WP_004179253.1;Name=WP_004179253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324400.1;locus_tag=NLI98_RS16215;product=ABC transporter ATP-binding protein;protein_id=WP_004179253.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3323338 3324918 . - . ID=gene-NLI98_RS16220;Name=NLI98_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16220;old_locus_tag=NLI98_16215 NZ_CP100601.1 Protein Homology CDS 3323338 3324918 . - 0 ID=cds-WP_176398004.1;Parent=gene-NLI98_RS16220;Dbxref=Genbank:WP_176398004.1;Name=WP_176398004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195815.1;locus_tag=NLI98_RS16220;product=iron ABC transporter permease;protein_id=WP_176398004.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3324940 3325956 . - . ID=gene-NLI98_RS16225;Name=NLI98_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16225;old_locus_tag=NLI98_16220 NZ_CP100601.1 Protein Homology CDS 3324940 3325956 . - 0 ID=cds-WP_004179245.1;Parent=gene-NLI98_RS16225;Dbxref=Genbank:WP_004179245.1;Name=WP_004179245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813041.1;locus_tag=NLI98_RS16225;product=iron ABC transporter substrate-binding protein;protein_id=WP_004179245.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 3326356 3326967 . + . ID=gene-NLI98_RS16230;Name=NLI98_RS16230;end_range=3326967,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS16230;old_locus_tag=NLI98_16225;partial=true;pseudo=true NZ_CP100601.1 Protein Homology CDS 3326356 3326967 . + 0 ID=cds-NLI98_RS16230;Parent=gene-NLI98_RS16230;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3326967,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024202.2;locus_tag=NLI98_RS16230;partial=true;product=CSS-motif domain-containing protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 3327082 3327891 . + . ID=gene-NLI98_RS16235;Name=NLI98_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16235;old_locus_tag=NLI98_16230 NZ_CP100601.1 Protein Homology CDS 3327082 3327891 . + 0 ID=cds-WP_223369559.1;Parent=gene-NLI98_RS16235;Dbxref=Genbank:WP_223369559.1;Name=WP_223369559.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.2;locus_tag=NLI98_RS16235;product=EAL domain-containing protein;protein_id=WP_223369559.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3327935 3328276 . - . ID=gene-NLI98_RS16240;Name=NLI98_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16240;old_locus_tag=NLI98_16235 NZ_CP100601.1 Protein Homology CDS 3327935 3328276 . - 0 ID=cds-WP_004183593.1;Parent=gene-NLI98_RS16240;Dbxref=Genbank:WP_004183593.1;Name=WP_004183593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183593.1;locus_tag=NLI98_RS16240;product=STAS domain-containing protein;protein_id=WP_004183593.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3328341 3330767 . - . ID=gene-NLI98_RS16245;Name=NLI98_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16245;old_locus_tag=NLI98_16240 NZ_CP100601.1 Protein Homology CDS 3328341 3330767 . - 0 ID=cds-WP_049183004.1;Parent=gene-NLI98_RS16245;Dbxref=Genbank:WP_049183004.1;Name=WP_049183004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324392.1;locus_tag=NLI98_RS16245;product=glycogen/starch/alpha-glucan phosphorylase;protein_id=WP_049183004.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3331065 3331152 . - . ID=gene-NLI98_RS16250;Name=NLI98_RS16250;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS16250;old_locus_tag=NLI98_16245 NZ_CP100601.1 tRNAscan-SE tRNA 3331065 3331152 . - . ID=rna-NLI98_RS16250;Parent=gene-NLI98_RS16250;anticodon=(pos:complement(3331116..3331118));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS16250;product=tRNA-Ser NZ_CP100601.1 tRNAscan-SE exon 3331065 3331152 . - . ID=exon-NLI98_RS16250-1;Parent=rna-NLI98_RS16250;anticodon=(pos:complement(3331116..3331118));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS16250;product=tRNA-Ser NZ_CP100601.1 RefSeq gene 3331272 3332924 . - . ID=gene-NLI98_RS16255;Name=NLI98_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16255;old_locus_tag=NLI98_16250 NZ_CP100601.1 Protein Homology CDS 3331272 3332924 . - 0 ID=cds-WP_023286208.1;Parent=gene-NLI98_RS16255;Dbxref=Genbank:WP_023286208.1;Name=WP_023286208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705932.1;locus_tag=NLI98_RS16255;product=ABC transporter substrate-binding protein;protein_id=WP_023286208.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3333194 3333853 . + . ID=gene-NLI98_RS16260;Name=yccA;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=NLI98_RS16260;old_locus_tag=NLI98_16255 NZ_CP100601.1 Protein Homology CDS 3333194 3333853 . + 0 ID=cds-WP_002898458.1;Parent=gene-NLI98_RS16260;Dbxref=Genbank:WP_002898458.1;Name=WP_002898458.1;gbkey=CDS;gene=yccA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000375124.1;locus_tag=NLI98_RS16260;product=FtsH protease modulator YccA;protein_id=WP_002898458.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3333942 3334271 . + . ID=gene-NLI98_RS16265;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=NLI98_RS16265;old_locus_tag=NLI98_16260 NZ_CP100601.1 Protein Homology CDS 3333942 3334271 . + 0 ID=cds-WP_002898457.1;Parent=gene-NLI98_RS16265;Dbxref=Genbank:WP_002898457.1;Name=WP_002898457.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226178.1;locus_tag=NLI98_RS16265;product=sulfurtransferase TusE;protein_id=WP_002898457.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3334268 3334549 . - . ID=gene-NLI98_RS16270;Name=yccX;gbkey=Gene;gene=yccX;gene_biotype=protein_coding;locus_tag=NLI98_RS16270;old_locus_tag=NLI98_16265 NZ_CP100601.1 Protein Homology CDS 3334268 3334549 . - 0 ID=cds-WP_004150835.1;Parent=gene-NLI98_RS16270;Dbxref=Genbank:WP_004150835.1;Name=WP_004150835.1;Ontology_term=GO:0003998;gbkey=CDS;gene=yccX;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226177.1;locus_tag=NLI98_RS16270;product=acylphosphatase;protein_id=WP_004150835.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3334598 3335386 . - . ID=gene-NLI98_RS16275;Name=NLI98_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16275;old_locus_tag=NLI98_16270 NZ_CP100601.1 Protein Homology CDS 3334598 3335386 . - 0 ID=cds-WP_002898450.1;Parent=gene-NLI98_RS16275;Dbxref=Genbank:WP_002898450.1;Name=WP_002898450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226176.1;locus_tag=NLI98_RS16275;product=AraC family transcriptional regulator;protein_id=WP_002898450.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3335404 3335958 . - . ID=gene-NLI98_RS16280;Name=NLI98_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16280;old_locus_tag=NLI98_16275 NZ_CP100601.1 Protein Homology CDS 3335404 3335958 . - 0 ID=cds-WP_004210995.1;Parent=gene-NLI98_RS16280;Dbxref=Genbank:WP_004210995.1;Name=WP_004210995.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226175.1;locus_tag=NLI98_RS16280;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_004210995.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3336149 3337351 . + . ID=gene-NLI98_RS16285;Name=rlmI;gbkey=Gene;gene=rlmI;gene_biotype=protein_coding;locus_tag=NLI98_RS16285;old_locus_tag=NLI98_16280 NZ_CP100601.1 Protein Homology CDS 3336149 3337351 . + 0 ID=cds-WP_004141630.1;Parent=gene-NLI98_RS16285;Dbxref=Genbank:WP_004141630.1;Name=WP_004141630.1;Ontology_term=GO:0003723,GO:0008649;gbkey=CDS;gene=rlmI;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460054.1;locus_tag=NLI98_RS16285;product=23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI;protein_id=WP_004141630.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3337411 3337728 . + . ID=gene-NLI98_RS16290;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=NLI98_RS16290;old_locus_tag=NLI98_16285 NZ_CP100601.1 Protein Homology CDS 3337411 3337728 . + 0 ID=cds-WP_002898441.1;Parent=gene-NLI98_RS16290;Dbxref=Genbank:WP_002898441.1;Name=WP_002898441.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226173.1;locus_tag=NLI98_RS16290;product=heat shock protein HspQ;protein_id=WP_002898441.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3337759 3338172 . - . ID=gene-NLI98_RS16295;Name=NLI98_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16295;old_locus_tag=NLI98_16290 NZ_CP100601.1 Protein Homology CDS 3337759 3338172 . - 0 ID=cds-WP_004144085.1;Parent=gene-NLI98_RS16295;Dbxref=Genbank:WP_004144085.1;Name=WP_004144085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226172.1;locus_tag=NLI98_RS16295;product=CoA-binding protein;protein_id=WP_004144085.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3338327 3338785 . + . ID=gene-NLI98_RS16300;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=NLI98_RS16300;old_locus_tag=NLI98_16295 NZ_CP100601.1 Protein Homology CDS 3338327 3338785 . + 0 ID=cds-WP_002898432.1;Parent=gene-NLI98_RS16300;Dbxref=Genbank:WP_002898432.1;Name=WP_002898432.1;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415483.2;locus_tag=NLI98_RS16300;product=methylglyoxal synthase;protein_id=WP_002898432.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3338797 3340851 . - . ID=gene-NLI98_RS16305;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=NLI98_RS16305;old_locus_tag=NLI98_16300 NZ_CP100601.1 Protein Homology CDS 3338797 3340851 . - 0 ID=cds-WP_004179218.1;Parent=gene-NLI98_RS16305;Dbxref=Genbank:WP_004179218.1;Name=WP_004179218.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226170.1;locus_tag=NLI98_RS16305;product=DNA helicase IV;protein_id=WP_004179218.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3340976 3341422 . + . ID=gene-NLI98_RS16310;Name=NLI98_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16310;old_locus_tag=NLI98_16305 NZ_CP100601.1 Protein Homology CDS 3340976 3341422 . + 0 ID=cds-WP_004224032.1;Parent=gene-NLI98_RS16310;Dbxref=Genbank:WP_004224032.1;Name=WP_004224032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309072.1;locus_tag=NLI98_RS16310;product=YccF domain-containing protein;protein_id=WP_004224032.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3341440 3343575 . + . ID=gene-NLI98_RS16315;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=NLI98_RS16315;old_locus_tag=NLI98_16310 NZ_CP100601.1 Protein Homology CDS 3341440 3343575 . + 0 ID=cds-WP_002898422.1;Parent=gene-NLI98_RS16315;Dbxref=Genbank:WP_002898422.1;Name=WP_002898422.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226168.1;locus_tag=NLI98_RS16315;product=YccS family putative transporter;protein_id=WP_002898422.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3343589 3344185 . - . ID=gene-NLI98_RS16320;Name=NLI98_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16320;old_locus_tag=NLI98_16315 NZ_CP100601.1 Protein Homology CDS 3343589 3344185 . - 0 ID=cds-WP_004179217.1;Parent=gene-NLI98_RS16320;Dbxref=Genbank:WP_004179217.1;Name=WP_004179217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226167.1;locus_tag=NLI98_RS16320;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_004179217.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3344534 3345043 . + . ID=gene-NLI98_RS16325;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=NLI98_RS16325;old_locus_tag=NLI98_16320 NZ_CP100601.1 Protein Homology CDS 3344534 3345043 . + 0 ID=cds-WP_002898418.1;Parent=gene-NLI98_RS16325;Dbxref=Genbank:WP_002898418.1;Name=WP_002898418.1;gbkey=CDS;gene=sulA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226166.1;locus_tag=NLI98_RS16325;product=cell division inhibitor SulA;protein_id=WP_002898418.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3345396 3346466 . + . ID=gene-NLI98_RS16330;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=NLI98_RS16330;old_locus_tag=NLI98_16325 NZ_CP100601.1 Protein Homology CDS 3345396 3346466 . + 0 ID=cds-WP_002898408.1;Parent=gene-NLI98_RS16330;Dbxref=Genbank:WP_002898408.1;Name=WP_002898408.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309068.1;locus_tag=NLI98_RS16330;product=porin OmpA;protein_id=WP_002898408.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3346598 3347050 . - . ID=gene-NLI98_RS16335;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=NLI98_RS16335;old_locus_tag=NLI98_16330 NZ_CP100601.1 Protein Homology CDS 3346598 3347050 . - 0 ID=cds-WP_002898404.1;Parent=gene-NLI98_RS16335;Dbxref=Genbank:WP_002898404.1;Name=WP_002898404.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226164.1;locus_tag=NLI98_RS16335;product=macrodomain Ter protein MatP;protein_id=WP_002898404.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3347236 3348993 . + . ID=gene-NLI98_RS16340;Name=NLI98_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16340;old_locus_tag=NLI98_16335 NZ_CP100601.1 Protein Homology CDS 3347236 3348993 . + 0 ID=cds-WP_004147851.1;Parent=gene-NLI98_RS16340;Dbxref=Genbank:WP_004147851.1;Name=WP_004147851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226163.1;locus_tag=NLI98_RS16340;product=Lon protease family protein;protein_id=WP_004147851.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3349063 3349581 . + . ID=gene-NLI98_RS16345;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=NLI98_RS16345;old_locus_tag=NLI98_16340 NZ_CP100601.1 Protein Homology CDS 3349063 3349581 . + 0 ID=cds-WP_002898398.1;Parent=gene-NLI98_RS16345;Dbxref=Genbank:WP_002898398.1;Name=WP_002898398.1;Ontology_term=GO:0006633,GO:0008693;gbkey=CDS;gene=fabA;go_function=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity|0008693||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014915875.1;locus_tag=NLI98_RS16345;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_002898398.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3349650 3349817 . - . ID=gene-NLI98_RS16350;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=NLI98_RS16350;old_locus_tag=NLI98_16345 NZ_CP100601.1 Protein Homology CDS 3349650 3349817 . - 0 ID=cds-WP_002898396.1;Parent=gene-NLI98_RS16350;Dbxref=Genbank:WP_002898396.1;Name=WP_002898396.1;gbkey=CDS;gene=rmf;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309064.1;locus_tag=NLI98_RS16350;product=ribosome modulation factor;protein_id=WP_002898396.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3350072 3350635 . - . ID=gene-NLI98_RS16355;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=NLI98_RS16355;old_locus_tag=NLI98_16350 NZ_CP100601.1 Protein Homology CDS 3350072 3350635 . - 0 ID=cds-WP_002898392.1;Parent=gene-NLI98_RS16355;Dbxref=Genbank:WP_002898392.1;Name=WP_002898392.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226161.1;locus_tag=NLI98_RS16355;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_002898392.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3350632 3352272 . - . ID=gene-NLI98_RS16360;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=NLI98_RS16360;old_locus_tag=NLI98_16355 NZ_CP100601.1 Protein Homology CDS 3350632 3352272 . - 0 ID=cds-WP_004179201.1;Parent=gene-NLI98_RS16360;Dbxref=Genbank:WP_004179201.1;Name=WP_004179201.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460038.1;locus_tag=NLI98_RS16360;product=intermembrane transport protein PqiB;protein_id=WP_004179201.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3352262 3353530 . - . ID=gene-NLI98_RS16365;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=NLI98_RS16365;old_locus_tag=NLI98_16360 NZ_CP100601.1 Protein Homology CDS 3352262 3353530 . - 0 ID=cds-WP_004147849.1;Parent=gene-NLI98_RS16365;Dbxref=Genbank:WP_004147849.1;Name=WP_004147849.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183570.1;locus_tag=NLI98_RS16365;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_004147849.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3353545 3355452 . - . ID=gene-NLI98_RS16370;Name=NLI98_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16370;old_locus_tag=NLI98_16365 NZ_CP100601.1 Protein Homology CDS 3353545 3355452 . - 0 ID=cds-WP_004147848.1;Parent=gene-NLI98_RS16370;Dbxref=Genbank:WP_004147848.1;Name=WP_004147848.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053132.1;locus_tag=NLI98_RS16370;product=ABC transporter ATP-binding protein;protein_id=WP_004147848.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3355465 3357570 . - . ID=gene-NLI98_RS16375;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=NLI98_RS16375;old_locus_tag=NLI98_16370 NZ_CP100601.1 Protein Homology CDS 3355465 3357570 . - 0 ID=cds-WP_004191110.1;Parent=gene-NLI98_RS16375;Dbxref=Genbank:WP_004191110.1;Name=WP_004191110.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226157.1;locus_tag=NLI98_RS16375;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_004191110.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3357670 3358779 . + . ID=gene-NLI98_RS16380;Name=NLI98_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16380;old_locus_tag=NLI98_16375 NZ_CP100601.1 Protein Homology CDS 3357670 3358779 . + 0 ID=cds-WP_088498106.1;Parent=gene-NLI98_RS16380;Dbxref=Genbank:WP_088498106.1;Name=WP_088498106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226156.1;locus_tag=NLI98_RS16380;product=YcbX family protein;protein_id=WP_088498106.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3358776 3359318 . - . ID=gene-NLI98_RS16385;Name=zapC;gbkey=Gene;gene=zapC;gene_biotype=protein_coding;locus_tag=NLI98_RS16385;old_locus_tag=NLI98_16380 NZ_CP100601.1 Protein Homology CDS 3358776 3359318 . - 0 ID=cds-WP_002898308.1;Parent=gene-NLI98_RS16385;Dbxref=Genbank:WP_002898308.1;Name=WP_002898308.1;gbkey=CDS;gene=zapC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226155.1;locus_tag=NLI98_RS16385;product=cell division protein ZapC;protein_id=WP_002898308.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3359488 3360498 . - . ID=gene-NLI98_RS16390;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=NLI98_RS16390;old_locus_tag=NLI98_16385 NZ_CP100601.1 Protein Homology CDS 3359488 3360498 . - 0 ID=cds-WP_002898303.1;Parent=gene-NLI98_RS16390;Dbxref=Genbank:WP_002898303.1;Name=WP_002898303.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226154.1;locus_tag=NLI98_RS16390;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_002898303.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3360748 3361323 . + . ID=gene-NLI98_RS16395;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;locus_tag=NLI98_RS16395;old_locus_tag=NLI98_16390 NZ_CP100601.1 Protein Homology CDS 3360748 3361323 . + 0 ID=cds-WP_002898296.1;Parent=gene-NLI98_RS16395;Dbxref=Genbank:WP_002898296.1;Name=WP_002898296.1;Ontology_term=GO:0046306,GO:0008752;gbkey=CDS;gene=ssuE;go_function=FMN reductase activity|0008752||IEA;go_process=alkanesulfonate catabolic process|0046306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226153.1;locus_tag=NLI98_RS16395;product=NADPH-dependent FMN reductase;protein_id=WP_002898296.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 3361316 3362315 . + . ID=gene-NLI98_RS16400;Name=NLI98_RS16400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS16400;old_locus_tag=NLI98_16395;pseudo=true NZ_CP100601.1 Protein Homology CDS 3361316 3362315 . + 0 ID=cds-NLI98_RS16400;Parent=gene-NLI98_RS16400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226152.1;locus_tag=NLI98_RS16400;product=sulfonate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 3362275 3363420 . + . ID=gene-NLI98_RS16405;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=NLI98_RS16405;old_locus_tag=NLI98_16400 NZ_CP100601.1 Protein Homology CDS 3362275 3363420 . + 0 ID=cds-WP_014907889.1;Parent=gene-NLI98_RS16405;Dbxref=Genbank:WP_014907889.1;Name=WP_014907889.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415455.1;locus_tag=NLI98_RS16405;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_014907889.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3363431 3364222 . + . ID=gene-NLI98_RS16410;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=NLI98_RS16410;old_locus_tag=NLI98_16405 NZ_CP100601.1 Protein Homology CDS 3363431 3364222 . + 0 ID=cds-WP_004141755.1;Parent=gene-NLI98_RS16410;Dbxref=Genbank:WP_004141755.1;Name=WP_004141755.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226150.1;locus_tag=NLI98_RS16410;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_004141755.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3364219 3364992 . + . ID=gene-NLI98_RS16415;Name=ssuB;gbkey=Gene;gene=ssuB;gene_biotype=protein_coding;locus_tag=NLI98_RS16415;old_locus_tag=NLI98_16410 NZ_CP100601.1 Protein Homology CDS 3364219 3364992 . + 0 ID=cds-WP_064278949.1;Parent=gene-NLI98_RS16415;Dbxref=Genbank:WP_064278949.1;Name=WP_064278949.1;Ontology_term=GO:0005524;gbkey=CDS;gene=ssuB;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226149.1;locus_tag=NLI98_RS16415;product=aliphatic sulfonates ABC transporter ATP-binding protein;protein_id=WP_064278949.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3365090 3367705 . - . ID=gene-NLI98_RS16420;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=NLI98_RS16420;old_locus_tag=NLI98_16415 NZ_CP100601.1 Protein Homology CDS 3365090 3367705 . - 0 ID=cds-WP_264451951.1;Parent=gene-NLI98_RS16420;Dbxref=Genbank:WP_264451951.1;Name=WP_264451951.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193787.1;locus_tag=NLI98_RS16420;product=aminopeptidase N;protein_id=WP_264451951.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3368032 3369234 . + . ID=gene-NLI98_RS16425;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=NLI98_RS16425;old_locus_tag=NLI98_16420 NZ_CP100601.1 Protein Homology CDS 3368032 3369234 . + 0 ID=cds-WP_002898217.1;Parent=gene-NLI98_RS16425;Dbxref=Genbank:WP_002898217.1;Name=WP_002898217.1;Ontology_term=GO:0019358,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=nicotinate nucleotide salvage|0019358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226146.1;locus_tag=NLI98_RS16425;product=nicotinate phosphoribosyltransferase;protein_id=WP_002898217.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3369277 3370443 . - . ID=gene-NLI98_RS16430;Name=NLI98_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16430;old_locus_tag=NLI98_16425 NZ_CP100601.1 Protein Homology CDS 3369277 3370443 . - 0 ID=cds-WP_004147828.1;Parent=gene-NLI98_RS16430;Dbxref=Genbank:WP_004147828.1;Name=WP_004147828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226145.1;locus_tag=NLI98_RS16430;product=M20 family metallopeptidase;protein_id=WP_004147828.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3370462 3371700 . - . ID=gene-NLI98_RS16435;Name=NLI98_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16435;old_locus_tag=NLI98_16430 NZ_CP100601.1 Protein Homology CDS 3370462 3371700 . - 0 ID=cds-WP_004141764.1;Parent=gene-NLI98_RS16435;Dbxref=Genbank:WP_004141764.1;Name=WP_004141764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226144.1;locus_tag=NLI98_RS16435;product=Zn-dependent hydrolase;protein_id=WP_004141764.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3371725 3373014 . - . ID=gene-NLI98_RS16440;Name=NLI98_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16440;old_locus_tag=NLI98_16435 NZ_CP100601.1 Protein Homology CDS 3371725 3373014 . - 0 ID=cds-WP_088498105.1;Parent=gene-NLI98_RS16440;Dbxref=Genbank:WP_088498105.1;Name=WP_088498105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226143.1;locus_tag=NLI98_RS16440;product=septum formation initiator;protein_id=WP_088498105.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3373137 3374348 . - . ID=gene-NLI98_RS16445;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=NLI98_RS16445;old_locus_tag=NLI98_16440 NZ_CP100601.1 Protein Homology CDS 3373137 3374348 . - 0 ID=cds-WP_071604878.1;Parent=gene-NLI98_RS16445;Dbxref=Genbank:WP_071604878.1;Name=WP_071604878.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179185.1;locus_tag=NLI98_RS16445;product=diaminopropionate ammonia-lyase;protein_id=WP_071604878.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3374660 3375121 . + . ID=gene-NLI98_RS16450;Name=NLI98_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16450;old_locus_tag=NLI98_16445 NZ_CP100601.1 Protein Homology CDS 3374660 3375121 . + 0 ID=cds-WP_002898209.1;Parent=gene-NLI98_RS16450;Dbxref=Genbank:WP_002898209.1;Name=WP_002898209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459976.1;locus_tag=NLI98_RS16450;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_002898209.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3375297 3376697 . + . ID=gene-NLI98_RS16455;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=NLI98_RS16455;old_locus_tag=NLI98_16450 NZ_CP100601.1 Protein Homology CDS 3375297 3376697 . + 0 ID=cds-WP_002898206.1;Parent=gene-NLI98_RS16455;Dbxref=Genbank:WP_002898206.1;Name=WP_002898206.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123540.1;locus_tag=NLI98_RS16455;product=asparagine--tRNA ligase;protein_id=WP_002898206.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3377292 3378368 . + . ID=gene-NLI98_RS16460;Name=ompK35;gbkey=Gene;gene=ompK35;gene_biotype=protein_coding;locus_tag=NLI98_RS16460;old_locus_tag=NLI98_16455 NZ_CP100601.1 Protein Homology CDS 3377292 3378368 . + 0 ID=cds-WP_004195943.1;Parent=gene-NLI98_RS16460;Dbxref=Genbank:WP_004195943.1;Name=WP_004195943.1;gbkey=CDS;gene=ompK35;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001080666.1;locus_tag=NLI98_RS16460;product=porin OmpK35;protein_id=WP_004195943.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3378556 3379746 . + . ID=gene-NLI98_RS16465;Name=NLI98_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16465;old_locus_tag=NLI98_16460 NZ_CP100601.1 Protein Homology CDS 3378556 3379746 . + 0 ID=cds-WP_002898202.1;Parent=gene-NLI98_RS16465;Dbxref=Genbank:WP_002898202.1;Name=WP_002898202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653304.1;locus_tag=NLI98_RS16465;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=WP_002898202.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3379815 3380462 . - . ID=gene-NLI98_RS16470;Name=NLI98_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16470;old_locus_tag=NLI98_16465 NZ_CP100601.1 Protein Homology CDS 3379815 3380462 . - 0 ID=cds-WP_064278950.1;Parent=gene-NLI98_RS16470;Dbxref=Genbank:WP_064278950.1;Name=WP_064278950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226135.1;locus_tag=NLI98_RS16470;product=MBL fold metallo-hydrolase;protein_id=WP_064278950.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3380476 3381027 . - . ID=gene-NLI98_RS16475;Name=NLI98_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16475;old_locus_tag=NLI98_16470 NZ_CP100601.1 Protein Homology CDS 3380476 3381027 . - 0 ID=cds-WP_002898198.1;Parent=gene-NLI98_RS16475;Dbxref=Genbank:WP_002898198.1;Name=WP_002898198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309036.1;locus_tag=NLI98_RS16475;product=YcbK family protein;protein_id=WP_002898198.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3381330 3383120 . - . ID=gene-NLI98_RS16480;Name=ldtD;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=NLI98_RS16480;old_locus_tag=NLI98_16475 NZ_CP100601.1 Protein Homology CDS 3381330 3383120 . - 0 ID=cds-WP_064278951.1;Parent=gene-NLI98_RS16480;Dbxref=Genbank:WP_064278951.1;Name=WP_064278951.1;Ontology_term=GO:0016740;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226133.1;locus_tag=NLI98_RS16480;product=L%2CD-transpeptidase;protein_id=WP_064278951.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3383320 3387768 . - . ID=gene-NLI98_RS16485;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=NLI98_RS16485;old_locus_tag=NLI98_16480 NZ_CP100601.1 Protein Homology CDS 3383320 3387768 . - 0 ID=cds-WP_004176682.1;Parent=gene-NLI98_RS16485;Dbxref=Genbank:WP_004176682.1;Name=WP_004176682.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226132.1;locus_tag=NLI98_RS16485;product=chromosome partition protein MukB;protein_id=WP_004176682.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3387768 3388472 . - . ID=gene-NLI98_RS16490;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=NLI98_RS16490;old_locus_tag=NLI98_16485 NZ_CP100601.1 Protein Homology CDS 3387768 3388472 . - 0 ID=cds-WP_004150840.1;Parent=gene-NLI98_RS16490;Dbxref=Genbank:WP_004150840.1;Name=WP_004150840.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226131.1;locus_tag=NLI98_RS16490;product=chromosome partition protein MukE;protein_id=WP_004150840.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3388453 3389775 . - . ID=gene-NLI98_RS16495;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=NLI98_RS16495;old_locus_tag=NLI98_16490 NZ_CP100601.1 Protein Homology CDS 3388453 3389775 . - 0 ID=cds-WP_002898189.1;Parent=gene-NLI98_RS16495;Dbxref=Genbank:WP_002898189.1;Name=WP_002898189.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=NLI98_RS16495;product=chromosome partition protein MukF;protein_id=WP_002898189.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3389772 3390572 . - . ID=gene-NLI98_RS16500;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=NLI98_RS16500;old_locus_tag=NLI98_16495 NZ_CP100601.1 Protein Homology CDS 3389772 3390572 . - 0 ID=cds-WP_002898187.1;Parent=gene-NLI98_RS16500;Dbxref=Genbank:WP_002898187.1;Name=WP_002898187.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226128.1;locus_tag=NLI98_RS16500;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_002898187.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3390694 3391473 . + . ID=gene-NLI98_RS16505;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=NLI98_RS16505;old_locus_tag=NLI98_16500 NZ_CP100601.1 Protein Homology CDS 3390694 3391473 . + 0 ID=cds-WP_004141786.1;Parent=gene-NLI98_RS16505;Dbxref=Genbank:WP_004141786.1;Name=WP_004141786.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226127.1;locus_tag=NLI98_RS16505;product=envelope biogenesis factor ElyC;protein_id=WP_004141786.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3391450 3392343 . - . ID=gene-NLI98_RS16510;Name=NLI98_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16510;old_locus_tag=NLI98_16505 NZ_CP100601.1 Protein Homology CDS 3391450 3392343 . - 0 ID=cds-WP_264451952.1;Parent=gene-NLI98_RS16510;Dbxref=Genbank:WP_264451952.1;Name=WP_264451952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226126.1;locus_tag=NLI98_RS16510;product=YcbJ family phosphotransferase;protein_id=WP_264451952.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3392481 3393227 . - . ID=gene-NLI98_RS16515;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=NLI98_RS16515;old_locus_tag=NLI98_16510 NZ_CP100601.1 Protein Homology CDS 3392481 3393227 . - 0 ID=cds-WP_019704633.1;Parent=gene-NLI98_RS16515;Dbxref=Genbank:WP_019704633.1;Name=WP_019704633.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309028.1;locus_tag=NLI98_RS16515;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_019704633.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3393224 3393406 . - . ID=gene-NLI98_RS16520;Name=ycaR;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=NLI98_RS16520;old_locus_tag=NLI98_16515 NZ_CP100601.1 Protein Homology CDS 3393224 3393406 . - 0 ID=cds-WP_002898177.1;Parent=gene-NLI98_RS16520;Dbxref=Genbank:WP_002898177.1;Name=WP_002898177.1;gbkey=CDS;gene=ycaR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226124.1;locus_tag=NLI98_RS16520;product=protein YcaR;protein_id=WP_002898177.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3393470 3394699 . - . ID=gene-NLI98_RS16525;Name=NLI98_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16525;old_locus_tag=NLI98_16520 NZ_CP100601.1 Protein Homology CDS 3393470 3394699 . - 0 ID=cds-WP_004147814.1;Parent=gene-NLI98_RS16525;Dbxref=Genbank:WP_004147814.1;Name=WP_004147814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226123.1;locus_tag=NLI98_RS16525;product=winged helix-turn-helix domain-containing protein;protein_id=WP_004147814.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3394754 3395734 . - . ID=gene-NLI98_RS16530;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=NLI98_RS16530;old_locus_tag=NLI98_16525 NZ_CP100601.1 Protein Homology CDS 3394754 3395734 . - 0 ID=cds-WP_064150254.1;Parent=gene-NLI98_RS16530;Dbxref=Genbank:WP_064150254.1;Name=WP_064150254.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226122.1;locus_tag=NLI98_RS16530;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_064150254.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3395731 3397479 . - . ID=gene-NLI98_RS16535;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=NLI98_RS16535;old_locus_tag=NLI98_16530 NZ_CP100601.1 Protein Homology CDS 3395731 3397479 . - 0 ID=cds-WP_002898170.1;Parent=gene-NLI98_RS16535;Dbxref=Genbank:WP_002898170.1;Name=WP_002898170.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226121.1;locus_tag=NLI98_RS16535;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_002898170.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3397516 3399780 . - . ID=gene-NLI98_RS16540;Name=NLI98_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16540;old_locus_tag=NLI98_16535 NZ_CP100601.1 Protein Homology CDS 3397516 3399780 . - 0 ID=cds-WP_049110171.1;Parent=gene-NLI98_RS16540;Dbxref=Genbank:WP_049110171.1;Name=WP_049110171.1;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226120.1;locus_tag=NLI98_RS16540;product=ComEC family protein;protein_id=WP_049110171.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3399986 3400273 . - . ID=gene-NLI98_RS16545;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=NLI98_RS16545;old_locus_tag=NLI98_16540 NZ_CP100601.1 Protein Homology CDS 3399986 3400273 . - 0 ID=cds-WP_002898165.1;Parent=gene-NLI98_RS16545;Dbxref=Genbank:WP_002898165.1;Name=WP_002898165.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677;gbkey=CDS;gene=ihfB;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226119.1;locus_tag=NLI98_RS16545;product=integration host factor subunit beta;protein_id=WP_002898165.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3400425 3402098 . - . ID=gene-NLI98_RS16550;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=NLI98_RS16550;old_locus_tag=NLI98_16545 NZ_CP100601.1 Protein Homology CDS 3400425 3402098 . - 0 ID=cds-WP_002898162.1;Parent=gene-NLI98_RS16550;Dbxref=Genbank:WP_002898162.1;Name=WP_002898162.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=NLI98_RS16550;product=30S ribosomal protein S1;protein_id=WP_002898162.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3402232 3402915 . - . ID=gene-NLI98_RS16555;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=NLI98_RS16555;old_locus_tag=NLI98_16550 NZ_CP100601.1 Protein Homology CDS 3402232 3402915 . - 0 ID=cds-WP_002898160.1;Parent=gene-NLI98_RS16555;Dbxref=Genbank:WP_002898160.1;Name=WP_002898160.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000125007.1;locus_tag=NLI98_RS16555;product=(d)CMP kinase;protein_id=WP_002898160.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3403090 3404373 . - . ID=gene-NLI98_RS16560;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=NLI98_RS16560;old_locus_tag=NLI98_16555 NZ_CP100601.1 Protein Homology CDS 3403090 3404373 . - 0 ID=cds-WP_088498104.1;Parent=gene-NLI98_RS16560;Dbxref=Genbank:WP_088498104.1;Name=WP_088498104.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226116.1;locus_tag=NLI98_RS16560;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_088498104.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3404447 3405535 . - . ID=gene-NLI98_RS16565;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=NLI98_RS16565;old_locus_tag=NLI98_16560 NZ_CP100601.1 Protein Homology CDS 3404447 3405535 . - 0 ID=cds-WP_004176687.1;Parent=gene-NLI98_RS16565;Dbxref=Genbank:WP_004176687.1;Name=WP_004176687.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226115.1;locus_tag=NLI98_RS16565;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_004176687.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3405724 3406416 . - . ID=gene-NLI98_RS16570;Name=NLI98_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16570;old_locus_tag=NLI98_16565 NZ_CP100601.1 Protein Homology CDS 3405724 3406416 . - 0 ID=cds-WP_016831265.1;Parent=gene-NLI98_RS16570;Dbxref=Genbank:WP_016831265.1;Name=WP_016831265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226114.1;locus_tag=NLI98_RS16570;product=DUF421 domain-containing protein;protein_id=WP_016831265.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3406532 3408292 . + . ID=gene-NLI98_RS16575;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=NLI98_RS16575;old_locus_tag=NLI98_16570 NZ_CP100601.1 Protein Homology CDS 3406532 3408292 . + 0 ID=cds-WP_038807520.1;Parent=gene-NLI98_RS16575;Dbxref=Genbank:WP_038807520.1;Name=WP_038807520.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226113.1;locus_tag=NLI98_RS16575;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_038807520.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3408678 3409535 . + . ID=gene-NLI98_RS16580;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=NLI98_RS16580;old_locus_tag=NLI98_16575 NZ_CP100601.1 Protein Homology CDS 3408678 3409535 . + 0 ID=cds-WP_002898150.1;Parent=gene-NLI98_RS16580;Dbxref=Genbank:WP_002898150.1;Name=WP_002898150.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226112.1;locus_tag=NLI98_RS16580;product=formate transporter FocA;protein_id=WP_002898150.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3409587 3411869 . + . ID=gene-NLI98_RS16585;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=NLI98_RS16585;old_locus_tag=NLI98_16580 NZ_CP100601.1 Protein Homology CDS 3409587 3411869 . + 0 ID=cds-WP_023328691.1;Parent=gene-NLI98_RS16585;Dbxref=Genbank:WP_023328691.1;Name=WP_023328691.1;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226111.1;locus_tag=NLI98_RS16585;product=formate C-acetyltransferase;protein_id=WP_023328691.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3412061 3412801 . + . ID=gene-NLI98_RS16590;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=NLI98_RS16590;old_locus_tag=NLI98_16585 NZ_CP100601.1 Protein Homology CDS 3412061 3412801 . + 0 ID=cds-WP_002898145.1;Parent=gene-NLI98_RS16590;Dbxref=Genbank:WP_002898145.1;Name=WP_002898145.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226110.1;locus_tag=NLI98_RS16590;product=pyruvate formate lyase 1-activating protein;protein_id=WP_002898145.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3412964 3414112 . - . ID=gene-NLI98_RS16595;Name=NLI98_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16595;old_locus_tag=NLI98_16590 NZ_CP100601.1 Protein Homology CDS 3412964 3414112 . - 0 ID=cds-WP_004150843.1;Parent=gene-NLI98_RS16595;Dbxref=Genbank:WP_004150843.1;Name=WP_004150843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226109.1;locus_tag=NLI98_RS16595;product=MFS transporter;protein_id=WP_004150843.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3414387 3415250 . - . ID=gene-NLI98_RS16600;Name=NLI98_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16600;old_locus_tag=NLI98_16595 NZ_CP100601.1 Protein Homology CDS 3414387 3415250 . - 0 ID=cds-WP_032411192.1;Parent=gene-NLI98_RS16600;Dbxref=Genbank:WP_032411192.1;Name=WP_032411192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226107.1;locus_tag=NLI98_RS16600;product=dimethyl sulfoxide reductase anchor subunit;protein_id=WP_032411192.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3415252 3415869 . - . ID=gene-NLI98_RS16605;Name=dmsB;gbkey=Gene;gene=dmsB;gene_biotype=protein_coding;locus_tag=NLI98_RS16605;old_locus_tag=NLI98_16600 NZ_CP100601.1 Protein Homology CDS 3415252 3415869 . - 0 ID=cds-WP_004150845.1;Parent=gene-NLI98_RS16605;Dbxref=Genbank:WP_004150845.1;Name=WP_004150845.1;gbkey=CDS;gene=dmsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226106.1;locus_tag=NLI98_RS16605;product=dimethylsulfoxide reductase subunit B;protein_id=WP_004150845.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3415880 3418318 . - . ID=gene-NLI98_RS16610;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=NLI98_RS16610;old_locus_tag=NLI98_16605 NZ_CP100601.1 Protein Homology CDS 3415880 3418318 . - 0 ID=cds-WP_004147794.1;Parent=gene-NLI98_RS16610;Dbxref=Genbank:WP_004147794.1;Name=WP_004147794.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226105.1;locus_tag=NLI98_RS16610;product=dimethylsulfoxide reductase subunit A;protein_id=WP_004147794.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3418519 3419811 . - . ID=gene-NLI98_RS16615;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=NLI98_RS16615;old_locus_tag=NLI98_16610 NZ_CP100601.1 Protein Homology CDS 3418519 3419811 . - 0 ID=cds-WP_002898139.1;Parent=gene-NLI98_RS16615;Dbxref=Genbank:WP_002898139.1;Name=WP_002898139.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=NLI98_RS16615;product=serine--tRNA ligase;protein_id=WP_002898139.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3419902 3421245 . - . ID=gene-NLI98_RS16620;Name=rarA;gbkey=Gene;gene=rarA;gene_biotype=protein_coding;gene_synonym=mgsA;locus_tag=NLI98_RS16620;old_locus_tag=NLI98_16615 NZ_CP100601.1 Protein Homology CDS 3419902 3421245 . - 0 ID=cds-WP_002898137.1;Parent=gene-NLI98_RS16620;Dbxref=Genbank:WP_002898137.1;Name=WP_002898137.1;gbkey=CDS;gene=rarA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123573.1;locus_tag=NLI98_RS16620;product=replication-associated recombination protein RarA;protein_id=WP_002898137.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3421254 3421865 . - . ID=gene-NLI98_RS16625;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=NLI98_RS16625;old_locus_tag=NLI98_16620 NZ_CP100601.1 Protein Homology CDS 3421254 3421865 . - 0 ID=cds-WP_088498101.1;Parent=gene-NLI98_RS16625;Dbxref=Genbank:WP_088498101.1;Name=WP_088498101.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010354356.1;locus_tag=NLI98_RS16625;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_088498101.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3421988 3426259 . - . ID=gene-NLI98_RS16630;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=NLI98_RS16630;old_locus_tag=NLI98_16625 NZ_CP100601.1 Protein Homology CDS 3421988 3426259 . - 0 ID=cds-WP_141828057.1;Parent=gene-NLI98_RS16630;Dbxref=Genbank:WP_141828057.1;Name=WP_141828057.1;Ontology_term=GO:0003677,GO:0005524;gbkey=CDS;gene=ftsK;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226101.1;locus_tag=NLI98_RS16630;product=DNA translocase FtsK;protein_id=WP_141828057.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3426395 3426889 . - . ID=gene-NLI98_RS16635;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=NLI98_RS16635;old_locus_tag=NLI98_16630 NZ_CP100601.1 Protein Homology CDS 3426395 3426889 . - 0 ID=cds-WP_000228469.1;Parent=gene-NLI98_RS16635;Dbxref=Genbank:WP_000228469.1;Name=WP_000228469.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=NLI98_RS16635;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_000228469.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3427422 3428390 . + . ID=gene-NLI98_RS16640;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=NLI98_RS16640;old_locus_tag=NLI98_16635 NZ_CP100601.1 Protein Homology CDS 3427422 3428390 . + 0 ID=cds-WP_088498098.1;Parent=gene-NLI98_RS16640;Dbxref=Genbank:WP_088498098.1;Name=WP_088498098.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226098.1;locus_tag=NLI98_RS16640;product=thioredoxin-disulfide reductase;protein_id=WP_088498098.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3428505 3430271 . + . ID=gene-NLI98_RS16645;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=NLI98_RS16645;old_locus_tag=NLI98_16640 NZ_CP100601.1 Protein Homology CDS 3428505 3430271 . + 0 ID=cds-WP_002898017.1;Parent=gene-NLI98_RS16645;Dbxref=Genbank:WP_002898017.1;Name=WP_002898017.1;Ontology_term=GO:0042883,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=cysteine transport|0042883||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226097.1;locus_tag=NLI98_RS16645;product=cysteine/glutathione ABC transporter permease/ATP-binding protein CydD;protein_id=WP_002898017.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3430272 3431993 . + . ID=gene-NLI98_RS16650;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=NLI98_RS16650;old_locus_tag=NLI98_16645 NZ_CP100601.1 Protein Homology CDS 3430272 3431993 . + 0 ID=cds-WP_004209699.1;Parent=gene-NLI98_RS16650;Dbxref=Genbank:WP_004209699.1;Name=WP_004209699.1;Ontology_term=GO:0034775,GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=glutathione transmembrane transport|0034775||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226096.1;locus_tag=NLI98_RS16650;product=cysteine/glutathione ABC transporter ATP-binding protein/permease CydC;protein_id=WP_004209699.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3432038 3432739 . + . ID=gene-NLI98_RS16655;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=NLI98_RS16655;old_locus_tag=NLI98_16650 NZ_CP100601.1 Protein Homology CDS 3432038 3432739 . + 0 ID=cds-WP_002898014.1;Parent=gene-NLI98_RS16655;Dbxref=Genbank:WP_002898014.1;Name=WP_002898014.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002898014.1;locus_tag=NLI98_RS16655;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_002898014.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3433093 3433311 . + . ID=gene-NLI98_RS16660;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=NLI98_RS16660;old_locus_tag=NLI98_16655 NZ_CP100601.1 Protein Homology CDS 3433093 3433311 . + 0 ID=cds-WP_001040187.1;Parent=gene-NLI98_RS16660;Dbxref=Genbank:WP_001040187.1;Name=WP_001040187.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=NLI98_RS16660;product=translation initiation factor IF-1;protein_id=WP_001040187.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3433432 3435711 . - . ID=gene-NLI98_RS16665;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=NLI98_RS16665;old_locus_tag=NLI98_16660 NZ_CP100601.1 Protein Homology CDS 3433432 3435711 . - 0 ID=cds-WP_264451953.1;Parent=gene-NLI98_RS16665;Dbxref=Genbank:WP_264451953.1;Name=WP_264451953.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226093.1;locus_tag=NLI98_RS16665;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_264451953.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3435742 3436059 . - . ID=gene-NLI98_RS16670;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=NLI98_RS16670;old_locus_tag=NLI98_16665 NZ_CP100601.1 Protein Homology CDS 3435742 3436059 . - 0 ID=cds-WP_002896520.1;Parent=gene-NLI98_RS16670;Dbxref=Genbank:WP_002896520.1;Name=WP_002896520.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226092.1;locus_tag=NLI98_RS16670;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_002896520.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3436385 3436606 . + . ID=gene-NLI98_RS16675;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=NLI98_RS16675;old_locus_tag=NLI98_16670 NZ_CP100601.1 Protein Homology CDS 3436385 3436606 . + 0 ID=cds-WP_002896516.1;Parent=gene-NLI98_RS16675;Dbxref=Genbank:WP_002896516.1;Name=WP_002896516.1;gbkey=CDS;gene=cspD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226091.1;locus_tag=NLI98_RS16675;product=cold shock-like protein CspD;protein_id=WP_002896516.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3436683 3438623 . - . ID=gene-NLI98_RS16680;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=NLI98_RS16680;old_locus_tag=NLI98_16675 NZ_CP100601.1 Protein Homology CDS 3436683 3438623 . - 0 ID=cds-WP_004150848.1;Parent=gene-NLI98_RS16680;Dbxref=Genbank:WP_004150848.1;Name=WP_004150848.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;gene=macB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226090.1;locus_tag=NLI98_RS16680;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_004150848.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3438620 3439735 . - . ID=gene-NLI98_RS16685;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=NLI98_RS16685;old_locus_tag=NLI98_16680 NZ_CP100601.1 Protein Homology CDS 3438620 3439735 . - 0 ID=cds-WP_002896440.1;Parent=gene-NLI98_RS16685;Dbxref=Genbank:WP_002896440.1;Name=WP_002896440.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226089.1;locus_tag=NLI98_RS16685;product=macrolide transporter subunit MacA;protein_id=WP_002896440.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3439882 3441540 . - . ID=gene-NLI98_RS16690;Name=NLI98_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16690;old_locus_tag=NLI98_16685 NZ_CP100601.1 Protein Homology CDS 3439882 3441540 . - 0 ID=cds-WP_004176693.1;Parent=gene-NLI98_RS16690;Dbxref=Genbank:WP_004176693.1;Name=WP_004176693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706761.1;locus_tag=NLI98_RS16690;product=ATP-dependent endonuclease;protein_id=WP_004176693.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3441960 3442655 . + . ID=gene-NLI98_RS16695;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=NLI98_RS16695;old_locus_tag=NLI98_16690 NZ_CP100601.1 Protein Homology CDS 3441960 3442655 . + 0 ID=cds-WP_002896434.1;Parent=gene-NLI98_RS16695;Dbxref=Genbank:WP_002896434.1;Name=WP_002896434.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226086.1;locus_tag=NLI98_RS16695;product=aquaporin Z;protein_id=WP_002896434.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3442771 3443670 . + . ID=gene-NLI98_RS16700;Name=NLI98_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16700;old_locus_tag=NLI98_16695 NZ_CP100601.1 Protein Homology CDS 3442771 3443670 . + 0 ID=cds-WP_004191154.1;Parent=gene-NLI98_RS16700;Dbxref=Genbank:WP_004191154.1;Name=WP_004191154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226085.1;locus_tag=NLI98_RS16700;product=lysine exporter LysO family protein;protein_id=WP_004191154.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3443814 3445466 . + . ID=gene-NLI98_RS16705;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=NLI98_RS16705;old_locus_tag=NLI98_16700 NZ_CP100601.1 Protein Homology CDS 3443814 3445466 . + 0 ID=cds-WP_064278549.1;Parent=gene-NLI98_RS16705;Dbxref=Genbank:WP_064278549.1;Name=WP_064278549.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122080.1;locus_tag=NLI98_RS16705;product=hydroxylamine reductase;protein_id=WP_064278549.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3445477 3446445 . + . ID=gene-NLI98_RS16710;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=NLI98_RS16710;old_locus_tag=NLI98_16705 NZ_CP100601.1 Protein Homology CDS 3445477 3446445 . + 0 ID=cds-WP_064278441.1;Parent=gene-NLI98_RS16710;Dbxref=Genbank:WP_064278441.1;Name=WP_064278441.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226083.1;locus_tag=NLI98_RS16710;product=NADH oxidoreductase;protein_id=WP_064278441.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3446657 3447091 . - . ID=gene-NLI98_RS16715;Name=NLI98_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16715;old_locus_tag=NLI98_16710 NZ_CP100601.1 Protein Homology CDS 3446657 3447091 . - 0 ID=cds-WP_004209688.1;Parent=gene-NLI98_RS16715;Dbxref=Genbank:WP_004209688.1;Name=WP_004209688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226082.1;locus_tag=NLI98_RS16715;product=DoxX family protein;protein_id=WP_004209688.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3447243 3448961 . + . ID=gene-NLI98_RS16720;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=NLI98_RS16720;old_locus_tag=NLI98_16715 NZ_CP100601.1 Protein Homology CDS 3447243 3448961 . + 0 ID=cds-WP_088498100.1;Parent=gene-NLI98_RS16720;Dbxref=Genbank:WP_088498100.1;Name=WP_088498100.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226081.1;locus_tag=NLI98_RS16720;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_088498100.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3449000 3450001 . + . ID=gene-NLI98_RS16725;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=NLI98_RS16725;old_locus_tag=NLI98_16720 NZ_CP100601.1 Protein Homology CDS 3449000 3450001 . + 0 ID=cds-WP_088498097.1;Parent=gene-NLI98_RS16725;Dbxref=Genbank:WP_088498097.1;Name=WP_088498097.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226080.1;locus_tag=NLI98_RS16725;product=low-specificity L-threonine aldolase;protein_id=WP_088498097.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3450012 3451454 . + . ID=gene-NLI98_RS16730;Name=NLI98_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16730;old_locus_tag=NLI98_16725 NZ_CP100601.1 Protein Homology CDS 3450012 3451454 . + 0 ID=cds-WP_088498096.1;Parent=gene-NLI98_RS16730;Dbxref=Genbank:WP_088498096.1;Name=WP_088498096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226079.1;locus_tag=NLI98_RS16730;product=SDR family oxidoreductase;protein_id=WP_088498096.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3451542 3452555 . + . ID=gene-NLI98_RS16735;Name=NLI98_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16735;old_locus_tag=NLI98_16730 NZ_CP100601.1 Protein Homology CDS 3451542 3452555 . + 0 ID=cds-WP_002896399.1;Parent=gene-NLI98_RS16735;Dbxref=Genbank:WP_002896399.1;Name=WP_002896399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226078.1;locus_tag=NLI98_RS16735;product=NAD(P)-dependent oxidoreductase;protein_id=WP_002896399.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3452552 3453382 . - . ID=gene-NLI98_RS16740;Name=NLI98_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16740;old_locus_tag=NLI98_16735 NZ_CP100601.1 Protein Homology CDS 3452552 3453382 . - 0 ID=cds-WP_004209681.1;Parent=gene-NLI98_RS16740;Dbxref=Genbank:WP_004209681.1;Name=WP_004209681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226077.1;locus_tag=NLI98_RS16740;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_004209681.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3453414 3454553 . - . ID=gene-NLI98_RS16745;Name=NLI98_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16745;old_locus_tag=NLI98_16740 NZ_CP100601.1 Protein Homology CDS 3453414 3454553 . - 0 ID=cds-WP_004141905.1;Parent=gene-NLI98_RS16745;Dbxref=Genbank:WP_004141905.1;Name=WP_004141905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226076.1;locus_tag=NLI98_RS16745;product=GGDEF domain-containing protein;protein_id=WP_004141905.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3455431 3455946 . + . ID=gene-NLI98_RS16750;Name=NLI98_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16750;old_locus_tag=NLI98_16745 NZ_CP100601.1 Protein Homology CDS 3455431 3455946 . + 0 ID=cds-WP_002896394.1;Parent=gene-NLI98_RS16750;Dbxref=Genbank:WP_002896394.1;Name=WP_002896394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226075.1;locus_tag=NLI98_RS16750;product=lipoprotein;protein_id=WP_002896394.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3456173 3456901 . + . ID=gene-NLI98_RS16755;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=NLI98_RS16755;old_locus_tag=NLI98_16750 NZ_CP100601.1 Protein Homology CDS 3456173 3456901 . + 0 ID=cds-WP_002896392.1;Parent=gene-NLI98_RS16755;Dbxref=Genbank:WP_002896392.1;Name=WP_002896392.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=artP;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=NLI98_RS16755;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_002896392.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3456922 3457653 . + . ID=gene-NLI98_RS16760;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=NLI98_RS16760;old_locus_tag=NLI98_16755 NZ_CP100601.1 Protein Homology CDS 3456922 3457653 . + 0 ID=cds-WP_088498099.1;Parent=gene-NLI98_RS16760;Dbxref=Genbank:WP_088498099.1;Name=WP_088498099.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226073.1;locus_tag=NLI98_RS16760;product=arginine ABC transporter substrate-binding protein;protein_id=WP_088498099.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3457660 3458376 . + . ID=gene-NLI98_RS16765;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=NLI98_RS16765;old_locus_tag=NLI98_16760 NZ_CP100601.1 Protein Homology CDS 3457660 3458376 . + 0 ID=cds-WP_002896386.1;Parent=gene-NLI98_RS16765;Dbxref=Genbank:WP_002896386.1;Name=WP_002896386.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226072.1;locus_tag=NLI98_RS16765;product=arginine ABC transporter permease ArtQ;protein_id=WP_002896386.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3458376 3459044 . + . ID=gene-NLI98_RS16770;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=NLI98_RS16770;old_locus_tag=NLI98_16765 NZ_CP100601.1 Protein Homology CDS 3458376 3459044 . + 0 ID=cds-WP_023158543.1;Parent=gene-NLI98_RS16770;Dbxref=Genbank:WP_023158543.1;Name=WP_023158543.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226071.1;locus_tag=NLI98_RS16770;product=arginine ABC transporter permease ArtM;protein_id=WP_023158543.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3459228 3459959 . + . ID=gene-NLI98_RS16775;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=NLI98_RS16775;old_locus_tag=NLI98_16770 NZ_CP100601.1 Protein Homology CDS 3459228 3459959 . + 0 ID=cds-WP_002896384.1;Parent=gene-NLI98_RS16775;Dbxref=Genbank:WP_002896384.1;Name=WP_002896384.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226070.1;locus_tag=NLI98_RS16775;product=ABC transporter substrate-binding protein ArtJ;protein_id=WP_002896384.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3460046 3461518 . - . ID=gene-NLI98_RS16780;Name=NLI98_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16780;old_locus_tag=NLI98_16775 NZ_CP100601.1 Protein Homology CDS 3460046 3461518 . - 0 ID=cds-WP_002896382.1;Parent=gene-NLI98_RS16780;Dbxref=Genbank:WP_002896382.1;Name=WP_002896382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226069.1;locus_tag=NLI98_RS16780;product=ATP-binding protein;protein_id=WP_002896382.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3461515 3462231 . - . ID=gene-NLI98_RS16785;Name=NLI98_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16785;old_locus_tag=NLI98_16780 NZ_CP100601.1 Protein Homology CDS 3461515 3462231 . - 0 ID=cds-WP_002896380.1;Parent=gene-NLI98_RS16785;Dbxref=Genbank:WP_002896380.1;Name=WP_002896380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226068.1;locus_tag=NLI98_RS16785;product=response regulator transcription factor;protein_id=WP_002896380.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3462310 3463437 . - . ID=gene-NLI98_RS16790;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=NLI98_RS16790;old_locus_tag=NLI98_16785 NZ_CP100601.1 Protein Homology CDS 3462310 3463437 . - 0 ID=cds-WP_002896378.1;Parent=gene-NLI98_RS16790;Dbxref=Genbank:WP_002896378.1;Name=WP_002896378.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226067.1;locus_tag=NLI98_RS16790;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_002896378.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3463479 3463967 . - . ID=gene-NLI98_RS16795;Name=NLI98_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16795;old_locus_tag=NLI98_16790 NZ_CP100601.1 Protein Homology CDS 3463479 3463967 . - 0 ID=cds-WP_002896376.1;Parent=gene-NLI98_RS16795;Dbxref=Genbank:WP_002896376.1;Name=WP_002896376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226066.1;locus_tag=NLI98_RS16795;product=DUF2593 family protein;protein_id=WP_002896376.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3464025 3464870 . - . ID=gene-NLI98_RS16800;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=NLI98_RS16800;old_locus_tag=NLI98_16795 NZ_CP100601.1 Protein Homology CDS 3464025 3464870 . - 0 ID=cds-WP_002896372.1;Parent=gene-NLI98_RS16800;Dbxref=Genbank:WP_002896372.1;Name=WP_002896372.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potI;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226065.1;locus_tag=NLI98_RS16800;product=putrescine ABC transporter permease PotI;protein_id=WP_002896372.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3464867 3465820 . - . ID=gene-NLI98_RS16805;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=NLI98_RS16805;old_locus_tag=NLI98_16800 NZ_CP100601.1 Protein Homology CDS 3464867 3465820 . - 0 ID=cds-WP_002896371.1;Parent=gene-NLI98_RS16805;Dbxref=Genbank:WP_002896371.1;Name=WP_002896371.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potH;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226064.1;locus_tag=NLI98_RS16805;product=putrescine ABC transporter permease PotH;protein_id=WP_002896371.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3465831 3466964 . - . ID=gene-NLI98_RS16810;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=NLI98_RS16810;old_locus_tag=NLI98_16805 NZ_CP100601.1 Protein Homology CDS 3465831 3466964 . - 0 ID=cds-WP_002896370.1;Parent=gene-NLI98_RS16810;Dbxref=Genbank:WP_002896370.1;Name=WP_002896370.1;Ontology_term=GO:0015846,GO:0055085,GO:0005524,GO:0015417,GO:0022857,GO:0043190;gbkey=CDS;gene=potG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type polyamine transporter activity|0015417||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000996010.1;locus_tag=NLI98_RS16810;product=putrescine ABC transporter ATP-binding subunit PotG;protein_id=WP_002896370.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3467128 3468240 . - . ID=gene-NLI98_RS16815;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=NLI98_RS16815;old_locus_tag=NLI98_16810 NZ_CP100601.1 Protein Homology CDS 3467128 3468240 . - 0 ID=cds-WP_002896368.1;Parent=gene-NLI98_RS16815;Dbxref=Genbank:WP_002896368.1;Name=WP_002896368.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potF;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226062.1;locus_tag=NLI98_RS16815;product=spermidine/putrescine ABC transporter substrate-binding protein PotF;protein_id=WP_002896368.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3468589 3469068 . - . ID=gene-NLI98_RS16820;Name=NLI98_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16820;old_locus_tag=NLI98_16815 NZ_CP100601.1 Protein Homology CDS 3468589 3469068 . - 0 ID=cds-WP_002896365.1;Parent=gene-NLI98_RS16820;Dbxref=Genbank:WP_002896365.1;Name=WP_002896365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226061.1;locus_tag=NLI98_RS16820;product=YbjN domain-containing protein;protein_id=WP_002896365.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3469157 3470059 . - . ID=gene-NLI98_RS16825;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=NLI98_RS16825;old_locus_tag=NLI98_16820 NZ_CP100601.1 Protein Homology CDS 3469157 3470059 . - 0 ID=cds-WP_002896363.1;Parent=gene-NLI98_RS16825;Dbxref=Genbank:WP_002896363.1;Name=WP_002896363.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226060.1;locus_tag=NLI98_RS16825;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_002896363.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3470174 3470896 . - . ID=gene-NLI98_RS16830;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=NLI98_RS16830;old_locus_tag=NLI98_16825 NZ_CP100601.1 Protein Homology CDS 3470174 3470896 . - 0 ID=cds-WP_088498095.1;Parent=gene-NLI98_RS16830;Dbxref=Genbank:WP_088498095.1;Name=WP_088498095.1;gbkey=CDS;gene=nfsA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308958.1;locus_tag=NLI98_RS16830;product=nitroreductase NfsA;protein_id=WP_088498095.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3470880 3471167 . - . ID=gene-NLI98_RS16835;Name=NLI98_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16835;old_locus_tag=NLI98_16830 NZ_CP100601.1 Protein Homology CDS 3470880 3471167 . - 0 ID=cds-WP_008805812.1;Parent=gene-NLI98_RS16835;Dbxref=Genbank:WP_008805812.1;Name=WP_008805812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133107.1;locus_tag=NLI98_RS16835;product=YbjC family protein;protein_id=WP_008805812.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3471370 3471633 . + . ID=gene-NLI98_RS16840;Name=NLI98_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16840;old_locus_tag=NLI98_16835 NZ_CP100601.1 Protein Homology CDS 3471370 3471633 . + 0 ID=cds-WP_002896352.1;Parent=gene-NLI98_RS16840;Dbxref=Genbank:WP_002896352.1;Name=WP_002896352.1;Ontology_term=GO:0097573;gbkey=CDS;go_function=glutathione oxidoreductase activity|0097573||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226056.1;locus_tag=NLI98_RS16840;product=GrxA family glutaredoxin;protein_id=WP_002896352.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3471640 3472023 . - . ID=gene-NLI98_RS16845;Name=NLI98_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16845;old_locus_tag=NLI98_16840 NZ_CP100601.1 Protein Homology CDS 3471640 3472023 . - 0 ID=cds-WP_002896351.1;Parent=gene-NLI98_RS16845;Dbxref=Genbank:WP_002896351.1;Name=WP_002896351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226055.1;locus_tag=NLI98_RS16845;product=inner membrane protein YbjM;protein_id=WP_002896351.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3472290 3473975 . + . ID=gene-NLI98_RS16850;Name=NLI98_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16850;old_locus_tag=NLI98_16845 NZ_CP100601.1 Protein Homology CDS 3472290 3473975 . + 0 ID=cds-WP_004179131.1;Parent=gene-NLI98_RS16850;Dbxref=Genbank:WP_004179131.1;Name=WP_004179131.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004179131.1;locus_tag=NLI98_RS16850;product=aspartate:alanine antiporter;protein_id=WP_004179131.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3474214 3474471 . - . ID=gene-NLI98_RS16855;Name=NLI98_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16855;old_locus_tag=NLI98_16850 NZ_CP100601.1 GeneMarkS-2+ CDS 3474214 3474471 . - 0 ID=cds-WP_123806901.1;Parent=gene-NLI98_RS16855;Dbxref=Genbank:WP_123806901.1;Name=WP_123806901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS16855;product=hypothetical protein;protein_id=WP_123806901.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3474547 3475173 . + . ID=gene-NLI98_RS16860;Name=NLI98_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16860;old_locus_tag=NLI98_16855 NZ_CP100601.1 Protein Homology CDS 3474547 3475173 . + 0 ID=cds-WP_223271217.1;Parent=gene-NLI98_RS16860;Dbxref=Genbank:WP_223271217.1;Name=WP_223271217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014831221.1;locus_tag=NLI98_RS16860;product=hypothetical protein;protein_id=WP_223271217.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3475418 3475687 . + . ID=gene-NLI98_RS16865;Name=NLI98_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16865;old_locus_tag=NLI98_16860 NZ_CP100601.1 Protein Homology CDS 3475418 3475687 . + 0 ID=cds-WP_004223848.1;Parent=gene-NLI98_RS16865;Dbxref=Genbank:WP_004223848.1;Name=WP_004223848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004223848.1;locus_tag=NLI98_RS16865;product=hypothetical protein;protein_id=WP_004223848.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3475857 3476420 . - . ID=gene-NLI98_RS16870;Name=NLI98_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16870;old_locus_tag=NLI98_16865 NZ_CP100601.1 Protein Homology CDS 3475857 3476420 . - 0 ID=cds-WP_004223846.1;Parent=gene-NLI98_RS16870;Dbxref=Genbank:WP_004223846.1;Name=WP_004223846.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226012.1;locus_tag=NLI98_RS16870;product=TetR family transcriptional regulator;protein_id=WP_004223846.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3476503 3477705 . + . ID=gene-NLI98_RS16875;Name=NLI98_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16875;old_locus_tag=NLI98_16870 NZ_CP100601.1 Protein Homology CDS 3476503 3477705 . + 0 ID=cds-WP_004151719.1;Parent=gene-NLI98_RS16875;Dbxref=Genbank:WP_004151719.1;Name=WP_004151719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226011.1;locus_tag=NLI98_RS16875;product=MFS transporter;protein_id=WP_004151719.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3477705 3478517 . + . ID=gene-NLI98_RS16880;Name=NLI98_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16880;old_locus_tag=NLI98_16875 NZ_CP100601.1 Protein Homology CDS 3477705 3478517 . + 0 ID=cds-WP_004141971.1;Parent=gene-NLI98_RS16880;Dbxref=Genbank:WP_004141971.1;Name=WP_004141971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226010.1;locus_tag=NLI98_RS16880;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_004141971.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3478555 3479787 . - . ID=gene-NLI98_RS16885;Name=kdeA;gbkey=Gene;gene=kdeA;gene_biotype=protein_coding;locus_tag=NLI98_RS16885;old_locus_tag=NLI98_16880 NZ_CP100601.1 Protein Homology CDS 3478555 3479787 . - 0 ID=cds-WP_004151718.1;Parent=gene-NLI98_RS16885;Dbxref=Genbank:WP_004151718.1;Name=WP_004151718.1;gbkey=CDS;gene=kdeA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226009.1;locus_tag=NLI98_RS16885;product=multidrug efflux MFS transporter KdeA;protein_id=WP_004151718.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3480115 3480708 . + . ID=gene-NLI98_RS16890;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=NLI98_RS16890;old_locus_tag=NLI98_16885 NZ_CP100601.1 Protein Homology CDS 3480115 3480708 . + 0 ID=cds-WP_004141974.1;Parent=gene-NLI98_RS16890;Dbxref=Genbank:WP_004141974.1;Name=WP_004141974.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226008.1;locus_tag=NLI98_RS16890;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_004141974.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3480810 3481568 . + . ID=gene-NLI98_RS16895;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=NLI98_RS16895;old_locus_tag=NLI98_16890 NZ_CP100601.1 Protein Homology CDS 3480810 3481568 . + 0 ID=cds-WP_004151717.1;Parent=gene-NLI98_RS16895;Dbxref=Genbank:WP_004151717.1;Name=WP_004151717.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226007.1;locus_tag=NLI98_RS16895;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_004151717.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3481607 3482809 . - . ID=gene-NLI98_RS16900;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=NLI98_RS16900;old_locus_tag=NLI98_16895 NZ_CP100601.1 Protein Homology CDS 3481607 3482809 . - 0 ID=cds-WP_004191175.1;Parent=gene-NLI98_RS16900;Dbxref=Genbank:WP_004191175.1;Name=WP_004191175.1;gbkey=CDS;gene=dacC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226006.1;locus_tag=NLI98_RS16900;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_004191175.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3483462 3483590 . - . ID=gene-NLI98_RS16905;Name=NLI98_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16905;old_locus_tag=NLI98_16900 NZ_CP100601.1 Protein Homology CDS 3483462 3483590 . - 0 ID=cds-WP_032416918.1;Parent=gene-NLI98_RS16905;Dbxref=Genbank:WP_032416918.1;Name=WP_032416918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226005.1;locus_tag=NLI98_RS16905;product=hypothetical protein;protein_id=WP_032416918.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3485124 3485750 . + . ID=gene-NLI98_RS16910;Name=NLI98_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16910;old_locus_tag=NLI98_16905 NZ_CP100601.1 Protein Homology CDS 3485124 3485750 . + 0 ID=cds-WP_004176727.1;Parent=gene-NLI98_RS16910;Dbxref=Genbank:WP_004176727.1;Name=WP_004176727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226004.1;locus_tag=NLI98_RS16910;product=glutathione S-transferase family protein;protein_id=WP_004176727.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3485753 3486862 . - . ID=gene-NLI98_RS16915;Name=NLI98_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16915;old_locus_tag=NLI98_16910 NZ_CP100601.1 Protein Homology CDS 3485753 3486862 . - 0 ID=cds-WP_009485546.1;Parent=gene-NLI98_RS16915;Dbxref=Genbank:WP_009485546.1;Name=WP_009485546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226003.1;locus_tag=NLI98_RS16915;product=PQQ-dependent sugar dehydrogenase;protein_id=WP_009485546.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3486978 3487361 . - . ID=gene-NLI98_RS16920;Name=bssR;gbkey=Gene;gene=bssR;gene_biotype=protein_coding;locus_tag=NLI98_RS16920;old_locus_tag=NLI98_16915 NZ_CP100601.1 Protein Homology CDS 3486978 3487361 . - 0 ID=cds-WP_264452375.1;Parent=gene-NLI98_RS16920;Dbxref=Genbank:WP_264452375.1;Name=WP_264452375.1;gbkey=CDS;gene=bssR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226002.1;locus_tag=NLI98_RS16920;product=biofilm formation regulator BssR;protein_id=WP_264452375.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3487740 3488981 . + . ID=gene-NLI98_RS16925;Name=NLI98_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16925;old_locus_tag=NLI98_16920 NZ_CP100601.1 Protein Homology CDS 3487740 3488981 . + 0 ID=cds-WP_004176729.1;Parent=gene-NLI98_RS16925;Dbxref=Genbank:WP_004176729.1;Name=WP_004176729.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226001.1;locus_tag=NLI98_RS16925;product=oligosaccharide MFS transporter;protein_id=WP_004176729.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3489214 3490539 . + . ID=gene-NLI98_RS16930;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=NLI98_RS16930;old_locus_tag=NLI98_16925 NZ_CP100601.1 Protein Homology CDS 3489214 3490539 . + 0 ID=cds-WP_087829781.1;Parent=gene-NLI98_RS16930;Dbxref=Genbank:WP_087829781.1;Name=WP_087829781.1;Ontology_term=GO:0018339,GO:0008172,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=rimO;go_function=S-methyltransferase activity|0008172||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226000.1;locus_tag=NLI98_RS16930;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_087829781.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3491220 3492131 . - . ID=gene-NLI98_RS16935;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=NLI98_RS16935;old_locus_tag=NLI98_16930 NZ_CP100601.1 Protein Homology CDS 3491220 3492131 . - 0 ID=cds-WP_004147729.1;Parent=gene-NLI98_RS16935;Dbxref=Genbank:WP_004147729.1;Name=WP_004147729.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225999.1;locus_tag=NLI98_RS16935;product=glutathione ABC transporter permease GsiD;protein_id=WP_004147729.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3492133 3493053 . - . ID=gene-NLI98_RS16940;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=NLI98_RS16940;old_locus_tag=NLI98_16935 NZ_CP100601.1 Protein Homology CDS 3492133 3493053 . - 0 ID=cds-WP_002892997.1;Parent=gene-NLI98_RS16940;Dbxref=Genbank:WP_002892997.1;Name=WP_002892997.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225998.1;locus_tag=NLI98_RS16940;product=glutathione ABC transporter permease GsiC;protein_id=WP_002892997.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3493100 3494641 . - . ID=gene-NLI98_RS16945;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=NLI98_RS16945;old_locus_tag=NLI98_16940 NZ_CP100601.1 Protein Homology CDS 3493100 3494641 . - 0 ID=cds-WP_002892991.1;Parent=gene-NLI98_RS16945;Dbxref=Genbank:WP_002892991.1;Name=WP_002892991.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225997.1;locus_tag=NLI98_RS16945;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_002892991.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3494674 3496533 . - . ID=gene-NLI98_RS16950;Name=gsiA;gbkey=Gene;gene=gsiA;gene_biotype=protein_coding;locus_tag=NLI98_RS16950;old_locus_tag=NLI98_16945 NZ_CP100601.1 Protein Homology CDS 3494674 3496533 . - 0 ID=cds-WP_088498093.1;Parent=gene-NLI98_RS16950;Dbxref=Genbank:WP_088498093.1;Name=WP_088498093.1;Ontology_term=GO:0006810,GO:0000166,GO:0005524;gbkey=CDS;gene=gsiA;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225996.1;locus_tag=NLI98_RS16950;product=glutathione ABC transporter ATP-binding protein GsiA;protein_id=WP_088498093.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3496551 3497492 . - . ID=gene-NLI98_RS16955;Name=iaaA;gbkey=Gene;gene=iaaA;gene_biotype=protein_coding;locus_tag=NLI98_RS16955;old_locus_tag=NLI98_16950 NZ_CP100601.1 Protein Homology CDS 3496551 3497492 . - 0 ID=cds-WP_004147725.1;Parent=gene-NLI98_RS16955;Dbxref=Genbank:WP_004147725.1;Name=WP_004147725.1;gbkey=CDS;gene=iaaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225995.1;locus_tag=NLI98_RS16955;product=beta-aspartyl-peptidase;protein_id=WP_004147725.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3497728 3498963 . + . ID=gene-NLI98_RS16960;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=NLI98_RS16960;old_locus_tag=NLI98_16955 NZ_CP100601.1 Protein Homology CDS 3497728 3498963 . + 0 ID=cds-WP_020317029.1;Parent=gene-NLI98_RS16960;Dbxref=Genbank:WP_020317029.1;Name=WP_020317029.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225994.1;locus_tag=NLI98_RS16960;product=molybdopterin molybdotransferase MoeA;protein_id=WP_020317029.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3498963 3499718 . + . ID=gene-NLI98_RS16965;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=NLI98_RS16965;old_locus_tag=NLI98_16960 NZ_CP100601.1 Protein Homology CDS 3498963 3499718 . + 0 ID=cds-WP_004141998.1;Parent=gene-NLI98_RS16965;Dbxref=Genbank:WP_004141998.1;Name=WP_004141998.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225993.1;locus_tag=NLI98_RS16965;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_004141998.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3499873 3500772 . + . ID=gene-NLI98_RS16970;Name=NLI98_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16970;old_locus_tag=NLI98_16965 NZ_CP100601.1 Protein Homology CDS 3499873 3500772 . + 0 ID=cds-WP_004183492.1;Parent=gene-NLI98_RS16970;Dbxref=Genbank:WP_004183492.1;Name=WP_004183492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225992.1;locus_tag=NLI98_RS16970;product=glycyl-radical enzyme activating protein;protein_id=WP_004183492.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3500777 3503209 . + . ID=gene-NLI98_RS16975;Name=NLI98_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16975;old_locus_tag=NLI98_16970 NZ_CP100601.1 Protein Homology CDS 3500777 3503209 . + 0 ID=cds-WP_004893251.1;Parent=gene-NLI98_RS16975;Dbxref=Genbank:WP_004893251.1;Name=WP_004893251.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225991.1;locus_tag=NLI98_RS16975;product=formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme;protein_id=WP_004893251.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3503386 3504201 . + . ID=gene-NLI98_RS16980;Name=NLI98_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16980;old_locus_tag=NLI98_16975 NZ_CP100601.1 Protein Homology CDS 3503386 3504201 . + 0 ID=cds-WP_004212174.1;Parent=gene-NLI98_RS16980;Dbxref=Genbank:WP_004212174.1;Name=WP_004212174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225990.1;locus_tag=NLI98_RS16980;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_004212174.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3504341 3505606 . + . ID=gene-NLI98_RS16985;Name=NLI98_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16985;old_locus_tag=NLI98_16980 NZ_CP100601.1 Protein Homology CDS 3504341 3505606 . + 0 ID=cds-WP_004176744.1;Parent=gene-NLI98_RS16985;Dbxref=Genbank:WP_004176744.1;Name=WP_004176744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225989.1;locus_tag=NLI98_RS16985;product=DUF1479 domain-containing protein;protein_id=WP_004176744.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3505603 3506733 . - . ID=gene-NLI98_RS16990;Name=NLI98_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16990;old_locus_tag=NLI98_16985 NZ_CP100601.1 Protein Homology CDS 3505603 3506733 . - 0 ID=cds-WP_004219745.1;Parent=gene-NLI98_RS16990;Dbxref=Genbank:WP_004219745.1;Name=WP_004219745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225988.1;locus_tag=NLI98_RS16990;product=LacI family transcriptional regulator;protein_id=WP_004219745.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3506977 3508278 . + . ID=gene-NLI98_RS16995;Name=NLI98_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS16995;old_locus_tag=NLI98_16990 NZ_CP100601.1 Protein Homology CDS 3506977 3508278 . + 0 ID=cds-WP_004893256.1;Parent=gene-NLI98_RS16995;Dbxref=Genbank:WP_004893256.1;Name=WP_004893256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225987.1;locus_tag=NLI98_RS16995;product=MFS transporter;protein_id=WP_004893256.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3508294 3510657 . + . ID=gene-NLI98_RS17000;Name=NLI98_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17000;old_locus_tag=NLI98_16995 NZ_CP100601.1 Protein Homology CDS 3508294 3510657 . + 0 ID=cds-WP_017880318.1;Parent=gene-NLI98_RS17000;Dbxref=Genbank:WP_017880318.1;Name=WP_017880318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225986.1;locus_tag=NLI98_RS17000;product=glycoside hydrolase family 31 protein;protein_id=WP_017880318.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3510791 3512383 . - . ID=gene-NLI98_RS17005;Name=NLI98_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17005;old_locus_tag=NLI98_17000 NZ_CP100601.1 Protein Homology CDS 3510791 3512383 . - 0 ID=cds-WP_002895876.1;Parent=gene-NLI98_RS17005;Dbxref=Genbank:WP_002895876.1;Name=WP_002895876.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308924.1;locus_tag=NLI98_RS17005;product=ABC-F family ATPase;protein_id=WP_002895876.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 3512432 3513347 . + . ID=gene-NLI98_RS17010;Name=NLI98_RS17010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS17010;old_locus_tag=NLI98_17005;pseudo=true NZ_CP100601.1 Protein Homology CDS 3512432 3513347 . + 0 ID=cds-NLI98_RS17010;Parent=gene-NLI98_RS17010;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225984.1;locus_tag=NLI98_RS17010;product=tyrosine-protein phosphatase;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 3513548 3514462 . + . ID=gene-NLI98_RS17015;Name=ldtB;gbkey=Gene;gene=ldtB;gene_biotype=protein_coding;locus_tag=NLI98_RS17015;old_locus_tag=NLI98_17010 NZ_CP100601.1 Protein Homology CDS 3513548 3514462 . + 0 ID=cds-WP_002895871.1;Parent=gene-NLI98_RS17015;Dbxref=Genbank:WP_002895871.1;Name=WP_002895871.1;gbkey=CDS;gene=ldtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001369247.1;locus_tag=NLI98_RS17015;product=L%2CD-transpeptidase;protein_id=WP_002895871.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3514608 3515324 . - . ID=gene-NLI98_RS17020;Name=NLI98_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17020;old_locus_tag=NLI98_17015 NZ_CP100601.1 Protein Homology CDS 3514608 3515324 . - 0 ID=cds-WP_004151705.1;Parent=gene-NLI98_RS17020;Dbxref=Genbank:WP_004151705.1;Name=WP_004151705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225982.1;locus_tag=NLI98_RS17020;product=GntR family transcriptional regulator;protein_id=WP_004151705.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3515393 3516769 . - . ID=gene-NLI98_RS17025;Name=NLI98_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17025;old_locus_tag=NLI98_17020 NZ_CP100601.1 Protein Homology CDS 3515393 3516769 . - 0 ID=cds-WP_020324614.1;Parent=gene-NLI98_RS17025;Dbxref=Genbank:WP_020324614.1;Name=WP_020324614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225981.1;locus_tag=NLI98_RS17025;product=glycoside hydrolase family 1 protein;protein_id=WP_020324614.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3516939 3518051 . - . ID=gene-NLI98_RS17030;Name=NLI98_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17030;old_locus_tag=NLI98_17025 NZ_CP100601.1 Protein Homology CDS 3516939 3518051 . - 0 ID=cds-WP_004176763.1;Parent=gene-NLI98_RS17030;Dbxref=Genbank:WP_004176763.1;Name=WP_004176763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225980.1;locus_tag=NLI98_RS17030;product=anion transporter;protein_id=WP_004176763.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3518048 3518521 . - . ID=gene-NLI98_RS17035;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=NLI98_RS17035;old_locus_tag=NLI98_17030 NZ_CP100601.1 Protein Homology CDS 3518048 3518521 . - 0 ID=cds-WP_004176765.1;Parent=gene-NLI98_RS17035;Dbxref=Genbank:WP_004176765.1;Name=WP_004176765.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225979.1;locus_tag=NLI98_RS17035;product=manganese-binding transcriptional regulator MntR;protein_id=WP_004176765.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3518707 3518832 . + . ID=gene-NLI98_RS17040;Name=mntS;gbkey=Gene;gene=mntS;gene_biotype=protein_coding;locus_tag=NLI98_RS17040;old_locus_tag=NLI98_17035 NZ_CP100601.1 Protein Homology CDS 3518707 3518832 . + 0 ID=cds-WP_002895851.1;Parent=gene-NLI98_RS17040;Dbxref=Genbank:WP_002895851.1;Name=WP_002895851.1;gbkey=CDS;gene=mntS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225978.1;locus_tag=NLI98_RS17040;product=manganase accumulation protein MntS;protein_id=WP_002895851.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3519101 3520681 . + . ID=gene-NLI98_RS17045;Name=NLI98_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17045;old_locus_tag=NLI98_17040 NZ_CP100601.1 Protein Homology CDS 3519101 3520681 . + 0 ID=cds-WP_002895847.1;Parent=gene-NLI98_RS17045;Dbxref=Genbank:WP_002895847.1;Name=WP_002895847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225977.1;locus_tag=NLI98_RS17045;product=phosphoethanolamine transferase;protein_id=WP_002895847.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3520772 3521284 . - . ID=gene-NLI98_RS17050;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=NLI98_RS17050;old_locus_tag=NLI98_17045 NZ_CP100601.1 Protein Homology CDS 3520772 3521284 . - 0 ID=cds-WP_088498091.1;Parent=gene-NLI98_RS17050;Dbxref=Genbank:WP_088498091.1;Name=WP_088498091.1;gbkey=CDS;gene=ompX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225976.1;locus_tag=NLI98_RS17050;product=outer membrane protein OmpX;protein_id=WP_088498091.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3521636 3522523 . + . ID=gene-NLI98_RS17055;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=NLI98_RS17055;old_locus_tag=NLI98_17050 NZ_CP100601.1 Protein Homology CDS 3521636 3522523 . + 0 ID=cds-WP_021312999.1;Parent=gene-NLI98_RS17055;Dbxref=Genbank:WP_021312999.1;Name=WP_021312999.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225974.1;locus_tag=NLI98_RS17055;product=threonine/homoserine exporter RhtA;protein_id=WP_021312999.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3522761 3523264 . + . ID=gene-NLI98_RS17060;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=NLI98_RS17060;old_locus_tag=NLI98_17055 NZ_CP100601.1 Protein Homology CDS 3522761 3523264 . + 0 ID=cds-WP_002895841.1;Parent=gene-NLI98_RS17060;Dbxref=Genbank:WP_002895841.1;Name=WP_002895841.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225973.1;locus_tag=NLI98_RS17060;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_002895841.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3523672 3524418 . + . ID=gene-NLI98_RS17065;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=NLI98_RS17065;old_locus_tag=NLI98_17060 NZ_CP100601.1 Protein Homology CDS 3523672 3524418 . + 0 ID=cds-WP_002895839.1;Parent=gene-NLI98_RS17065;Dbxref=Genbank:WP_002895839.1;Name=WP_002895839.1;Ontology_term=GO:0015276,GO:0016020;gbkey=CDS;gene=glnH;go_component=membrane|0016020||IEA;go_function=ligand-gated ion channel activity|0015276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123681.1;locus_tag=NLI98_RS17065;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_002895839.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3524544 3525203 . + . ID=gene-NLI98_RS17070;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=NLI98_RS17070;old_locus_tag=NLI98_17065 NZ_CP100601.1 Protein Homology CDS 3524544 3525203 . + 0 ID=cds-WP_002895837.1;Parent=gene-NLI98_RS17070;Dbxref=Genbank:WP_002895837.1;Name=WP_002895837.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1;locus_tag=NLI98_RS17070;product=glutamine ABC transporter permease GlnP;protein_id=WP_002895837.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3525200 3525922 . + . ID=gene-NLI98_RS17075;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=NLI98_RS17075;old_locus_tag=NLI98_17070 NZ_CP100601.1 Protein Homology CDS 3525200 3525922 . + 0 ID=cds-WP_004142040.1;Parent=gene-NLI98_RS17075;Dbxref=Genbank:WP_004142040.1;Name=WP_004142040.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000569103.1;locus_tag=NLI98_RS17075;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_004142040.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 3526034 3528230 . + . ID=gene-NLI98_RS17080;Name=ybiO;gbkey=Gene;gene=ybiO;gene_biotype=pseudogene;locus_tag=NLI98_RS17080;old_locus_tag=NLI98_17075;pseudo=true NZ_CP100601.1 Protein Homology CDS 3526034 3528230 . + 0 ID=cds-NLI98_RS17080;Parent=gene-NLI98_RS17080;Note=frameshifted;Ontology_term=GO:0055085;gbkey=CDS;gene=ybiO;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225969.1;locus_tag=NLI98_RS17080;product=mechanosensitive channel protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 3528233 3529147 . - . ID=gene-NLI98_RS17085;Name=rlmF;gbkey=Gene;gene=rlmF;gene_biotype=protein_coding;locus_tag=NLI98_RS17085;old_locus_tag=NLI98_17080 NZ_CP100601.1 Protein Homology CDS 3528233 3529147 . - 0 ID=cds-WP_002895831.1;Parent=gene-NLI98_RS17085;Dbxref=Genbank:WP_002895831.1;Name=WP_002895831.1;Ontology_term=GO:0006364,GO:0008988;gbkey=CDS;gene=rlmF;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183486.1;locus_tag=NLI98_RS17085;product=23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF;protein_id=WP_002895831.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3529244 3529858 . + . ID=gene-NLI98_RS17090;Name=NLI98_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17090;old_locus_tag=NLI98_17085 NZ_CP100601.1 Protein Homology CDS 3529244 3529858 . + 0 ID=cds-WP_002895828.1;Parent=gene-NLI98_RS17090;Dbxref=Genbank:WP_002895828.1;Name=WP_002895828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225966.1;locus_tag=NLI98_RS17090;product=flavin reductase family protein;protein_id=WP_002895828.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3529998 3530258 . + . ID=gene-NLI98_RS17095;Name=NLI98_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17095;old_locus_tag=NLI98_17090 NZ_CP100601.1 Protein Homology CDS 3529998 3530258 . + 0 ID=cds-WP_004176771.1;Parent=gene-NLI98_RS17095;Dbxref=Genbank:WP_004176771.1;Name=WP_004176771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225965.1;locus_tag=NLI98_RS17095;product=DUF1471 domain-containing protein;protein_id=WP_004176771.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3530279 3530545 . + . ID=gene-NLI98_RS17100;Name=NLI98_RS17100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17100;old_locus_tag=NLI98_17095 NZ_CP100601.1 Protein Homology CDS 3530279 3530545 . + 0 ID=cds-WP_002895824.1;Parent=gene-NLI98_RS17100;Dbxref=Genbank:WP_002895824.1;Name=WP_002895824.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225964.1;locus_tag=NLI98_RS17100;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_002895824.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3530831 3531091 . + . ID=gene-NLI98_RS17105;Name=ybiJ;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=NLI98_RS17105;old_locus_tag=NLI98_17100 NZ_CP100601.1 Protein Homology CDS 3530831 3531091 . + 0 ID=cds-WP_004176772.1;Parent=gene-NLI98_RS17105;Dbxref=Genbank:WP_004176772.1;Name=WP_004176772.1;gbkey=CDS;gene=ybiJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225963.1;locus_tag=NLI98_RS17105;product=DUF1471 family protein YbiJ;protein_id=WP_004176772.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3531201 3532169 . - . ID=gene-NLI98_RS17110;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=NLI98_RS17110;old_locus_tag=NLI98_17105 NZ_CP100601.1 Protein Homology CDS 3531201 3532169 . - 0 ID=cds-WP_004179105.1;Parent=gene-NLI98_RS17110;Dbxref=Genbank:WP_004179105.1;Name=WP_004179105.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225962.1;locus_tag=NLI98_RS17110;product=DNA-binding protein YbiB;protein_id=WP_004179105.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3532199 3534367 . - . ID=gene-NLI98_RS17115;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=NLI98_RS17115;old_locus_tag=NLI98_17110 NZ_CP100601.1 Protein Homology CDS 3532199 3534367 . - 0 ID=cds-WP_088498089.1;Parent=gene-NLI98_RS17115;Dbxref=Genbank:WP_088498089.1;Name=WP_088498089.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225961.1;locus_tag=NLI98_RS17115;product=ATP-dependent DNA helicase DinG;protein_id=WP_088498089.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3534555 3535910 . - . ID=gene-NLI98_RS17120;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=NLI98_RS17120;old_locus_tag=NLI98_17115 NZ_CP100601.1 Protein Homology CDS 3534555 3535910 . - 0 ID=cds-WP_004151702.1;Parent=gene-NLI98_RS17120;Dbxref=Genbank:WP_004151702.1;Name=WP_004151702.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225960.1;locus_tag=NLI98_RS17120;product=ATP-dependent RNA helicase RhlE;protein_id=WP_004151702.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3536125 3537117 . - . ID=gene-NLI98_RS17125;Name=NLI98_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17125;old_locus_tag=NLI98_17120 NZ_CP100601.1 Protein Homology CDS 3536125 3537117 . - 0 ID=cds-WP_002895757.1;Parent=gene-NLI98_RS17125;Dbxref=Genbank:WP_002895757.1;Name=WP_002895757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183482.1;locus_tag=NLI98_RS17125;product=transketolase family protein;protein_id=WP_002895757.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3537117 3537962 . - . ID=gene-NLI98_RS17130;Name=NLI98_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17130;old_locus_tag=NLI98_17125 NZ_CP100601.1 Protein Homology CDS 3537117 3537962 . - 0 ID=cds-WP_002895753.1;Parent=gene-NLI98_RS17130;Dbxref=Genbank:WP_002895753.1;Name=WP_002895753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225957.1;locus_tag=NLI98_RS17130;product=transketolase;protein_id=WP_002895753.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3537976 3538725 . - . ID=gene-NLI98_RS17135;Name=NLI98_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17135;old_locus_tag=NLI98_17130 NZ_CP100601.1 Protein Homology CDS 3537976 3538725 . - 0 ID=cds-WP_002895750.1;Parent=gene-NLI98_RS17135;Dbxref=Genbank:WP_002895750.1;Name=WP_002895750.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225956.1;locus_tag=NLI98_RS17135;product=glucose 1-dehydrogenase;protein_id=WP_002895750.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3538776 3540107 . - . ID=gene-NLI98_RS17140;Name=NLI98_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17140;old_locus_tag=NLI98_17135 NZ_CP100601.1 Protein Homology CDS 3538776 3540107 . - 0 ID=cds-WP_019705008.1;Parent=gene-NLI98_RS17140;Dbxref=Genbank:WP_019705008.1;Name=WP_019705008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225955.1;locus_tag=NLI98_RS17140;product=MFS transporter;protein_id=WP_019705008.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3540395 3540532 . - . ID=gene-NLI98_RS17145;Name=NLI98_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17145;old_locus_tag=NLI98_17140 NZ_CP100601.1 Protein Homology CDS 3540395 3540532 . - 0 ID=cds-WP_004142057.1;Parent=gene-NLI98_RS17145;Dbxref=Genbank:WP_004142057.1;Name=WP_004142057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225954.1;locus_tag=NLI98_RS17145;product=hypothetical protein;protein_id=WP_004142057.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3540524 3541447 . + . ID=gene-NLI98_RS17150;Name=NLI98_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17150;old_locus_tag=NLI98_17145 NZ_CP100601.1 Protein Homology CDS 3540524 3541447 . + 0 ID=cds-WP_048270525.1;Parent=gene-NLI98_RS17150;Dbxref=Genbank:WP_048270525.1;Name=WP_048270525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225953.1;locus_tag=NLI98_RS17150;product=LysR substrate-binding domain-containing protein;protein_id=WP_048270525.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3541521 3542180 . + . ID=gene-NLI98_RS17155;Name=cecR;gbkey=Gene;gene=cecR;gene_biotype=protein_coding;locus_tag=NLI98_RS17155;old_locus_tag=NLI98_17150 NZ_CP100601.1 Protein Homology CDS 3541521 3542180 . + 0 ID=cds-WP_002895746.1;Parent=gene-NLI98_RS17155;Dbxref=Genbank:WP_002895746.1;Name=WP_002895746.1;gbkey=CDS;gene=cecR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015584847.1;locus_tag=NLI98_RS17155;product=transcriptional regulator CecR;protein_id=WP_002895746.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3542180 3543175 . + . ID=gene-NLI98_RS17160;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=NLI98_RS17160;old_locus_tag=NLI98_17155 NZ_CP100601.1 Protein Homology CDS 3542180 3543175 . + 0 ID=cds-WP_002895745.1;Parent=gene-NLI98_RS17160;Dbxref=Genbank:WP_002895745.1;Name=WP_002895745.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225950.1;locus_tag=NLI98_RS17160;product=secretion protein HlyD;protein_id=WP_002895745.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3543168 3544907 . + . ID=gene-NLI98_RS17165;Name=NLI98_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17165;old_locus_tag=NLI98_17160 NZ_CP100601.1 Protein Homology CDS 3543168 3544907 . + 0 ID=cds-WP_065518610.1;Parent=gene-NLI98_RS17165;Dbxref=Genbank:WP_065518610.1;Name=WP_065518610.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225949.1;locus_tag=NLI98_RS17165;product=ATP-binding cassette domain-containing protein;protein_id=WP_065518610.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3544897 3546030 . + . ID=gene-NLI98_RS17170;Name=NLI98_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17170;old_locus_tag=NLI98_17165 NZ_CP100601.1 Protein Homology CDS 3544897 3546030 . + 0 ID=cds-WP_002895739.1;Parent=gene-NLI98_RS17170;Dbxref=Genbank:WP_002895739.1;Name=WP_002895739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225948.1;locus_tag=NLI98_RS17170;product=ABC transporter permease;protein_id=WP_002895739.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3546160 3547266 . + . ID=gene-NLI98_RS17175;Name=NLI98_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17175;old_locus_tag=NLI98_17170 NZ_CP100601.1 Protein Homology CDS 3546160 3547266 . + 0 ID=cds-WP_004142068.1;Parent=gene-NLI98_RS17175;Dbxref=Genbank:WP_004142068.1;Name=WP_004142068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225947.1;locus_tag=NLI98_RS17175;product=ABC transporter permease;protein_id=WP_004142068.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3547327 3547764 . - . ID=gene-NLI98_RS17180;Name=NLI98_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17180;old_locus_tag=NLI98_17175 NZ_CP100601.1 Protein Homology CDS 3547327 3547764 . - 0 ID=cds-WP_004176793.1;Parent=gene-NLI98_RS17180;Dbxref=Genbank:WP_004176793.1;Name=WP_004176793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004130686.1;locus_tag=NLI98_RS17180;product=YbhQ family protein;protein_id=WP_004176793.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3547896 3548657 . + . ID=gene-NLI98_RS17185;Name=NLI98_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17185;old_locus_tag=NLI98_17180 NZ_CP100601.1 Protein Homology CDS 3547896 3548657 . + 0 ID=cds-WP_004212206.1;Parent=gene-NLI98_RS17185;Dbxref=Genbank:WP_004212206.1;Name=WP_004212206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225945.1;locus_tag=NLI98_RS17185;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_004212206.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3548654 3549898 . + . ID=gene-NLI98_RS17190;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=NLI98_RS17190;old_locus_tag=NLI98_17185 NZ_CP100601.1 Protein Homology CDS 3548654 3549898 . + 0 ID=cds-WP_002895730.1;Parent=gene-NLI98_RS17190;Dbxref=Genbank:WP_002895730.1;Name=WP_002895730.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225944.1;locus_tag=NLI98_RS17190;product=cardiolipin synthase ClsB;protein_id=WP_002895730.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3549895 3550860 . + . ID=gene-NLI98_RS17195;Name=NLI98_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17195;old_locus_tag=NLI98_17190 NZ_CP100601.1 Protein Homology CDS 3549895 3550860 . + 0 ID=cds-WP_002895728.1;Parent=gene-NLI98_RS17195;Dbxref=Genbank:WP_002895728.1;Name=WP_002895728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225943.1;locus_tag=NLI98_RS17195;product=lysylphosphatidylglycerol synthase domain-containing protein;protein_id=WP_002895728.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3551031 3552394 . - . ID=gene-NLI98_RS17200;Name=NLI98_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17200;old_locus_tag=NLI98_17195 NZ_CP100601.1 Protein Homology CDS 3551926 3552394 . - 0 ID=cds-WP_102024253.1;Parent=gene-NLI98_RS17200;Dbxref=Genbank:WP_102024253.1;Name=WP_102024253.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1;locus_tag=NLI98_RS17200;product=IS3-like element ISKpn1 family transposase;protein_id=WP_102024253.1;transl_table=11 NZ_CP100601.1 Protein Homology CDS 3551031 3551926 . - 2 ID=cds-WP_102024253.1;Parent=gene-NLI98_RS17200;Dbxref=Genbank:WP_102024253.1;Name=WP_102024253.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1;locus_tag=NLI98_RS17200;product=IS3-like element ISKpn1 family transposase;protein_id=WP_102024253.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3552733 3553437 . - . ID=gene-NLI98_RS17205;Name=NLI98_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17205;old_locus_tag=NLI98_17200 NZ_CP100601.1 Protein Homology CDS 3552733 3553437 . - 0 ID=cds-WP_088498565.1;Parent=gene-NLI98_RS17205;Dbxref=Genbank:WP_088498565.1;Name=WP_088498565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225942.1;locus_tag=NLI98_RS17205;product=Bax inhibitor-1/YccA family protein;protein_id=WP_088498565.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3553483 3553935 . - . ID=gene-NLI98_RS17210;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=NLI98_RS17210;old_locus_tag=NLI98_17205 NZ_CP100601.1 Protein Homology CDS 3553483 3553935 . - 0 ID=cds-WP_002895674.1;Parent=gene-NLI98_RS17210;Dbxref=Genbank:WP_002895674.1;Name=WP_002895674.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225941.1;locus_tag=NLI98_RS17210;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_002895674.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3553937 3554185 . - . ID=gene-NLI98_RS17215;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=NLI98_RS17215;old_locus_tag=NLI98_17210 NZ_CP100601.1 Protein Homology CDS 3553937 3554185 . - 0 ID=cds-WP_002895672.1;Parent=gene-NLI98_RS17215;Dbxref=Genbank:WP_002895672.1;Name=WP_002895672.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225940.1;locus_tag=NLI98_RS17215;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_002895672.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3554178 3554666 . - . ID=gene-NLI98_RS17220;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=NLI98_RS17220;old_locus_tag=NLI98_17215 NZ_CP100601.1 Protein Homology CDS 3554178 3554666 . - 0 ID=cds-WP_002895670.1;Parent=gene-NLI98_RS17220;Dbxref=Genbank:WP_002895670.1;Name=WP_002895670.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225939.1;locus_tag=NLI98_RS17220;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_002895670.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3554670 3555182 . - . ID=gene-NLI98_RS17225;Name=moaB;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=NLI98_RS17225;old_locus_tag=NLI98_17220 NZ_CP100601.1 Protein Homology CDS 3554670 3555182 . - 0 ID=cds-WP_002895668.1;Parent=gene-NLI98_RS17225;Dbxref=Genbank:WP_002895668.1;Name=WP_002895668.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaB;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123739.1;locus_tag=NLI98_RS17225;product=molybdenum cofactor biosynthesis protein B;protein_id=WP_002895668.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3555206 3556195 . - . ID=gene-NLI98_RS17230;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=NLI98_RS17230;old_locus_tag=NLI98_17225 NZ_CP100601.1 Protein Homology CDS 3555206 3556195 . - 0 ID=cds-WP_032424176.1;Parent=gene-NLI98_RS17230;Dbxref=Genbank:WP_032424176.1;Name=WP_032424176.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225937.1;locus_tag=NLI98_RS17230;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_032424176.1;transl_table=11 NZ_CP100601.1 cmsearch riboswitch 3556183 3556321 . - . ID=id-NZ_CP100601.1:3556183..3556321;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100601.1 RefSeq gene 3556530 3557435 . + . ID=gene-NLI98_RS17235;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=NLI98_RS17235;old_locus_tag=NLI98_17230 NZ_CP100601.1 Protein Homology CDS 3556530 3557435 . + 0 ID=cds-WP_004142092.1;Parent=gene-NLI98_RS17235;Dbxref=Genbank:WP_004142092.1;Name=WP_004142092.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225936.1;locus_tag=NLI98_RS17235;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_004142092.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3557540 3559180 . + . ID=gene-NLI98_RS17240;Name=eptA;gbkey=Gene;gene=eptA;gene_biotype=protein_coding;locus_tag=NLI98_RS17240;old_locus_tag=NLI98_17235 NZ_CP100601.1 Protein Homology CDS 3557540 3559180 . + 0 ID=cds-WP_004176801.1;Parent=gene-NLI98_RS17240;Dbxref=Genbank:WP_004176801.1;Name=WP_004176801.1;Ontology_term=GO:0016772;gbkey=CDS;gene=eptA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225935.1;locus_tag=NLI98_RS17240;product=phosphoethanolamine transferase EptA;protein_id=WP_004176801.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3559180 3559851 . + . ID=gene-NLI98_RS17245;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=NLI98_RS17245;old_locus_tag=NLI98_17240 NZ_CP100601.1 Protein Homology CDS 3559180 3559851 . + 0 ID=cds-WP_002895659.1;Parent=gene-NLI98_RS17245;Dbxref=Genbank:WP_002895659.1;Name=WP_002895659.1;gbkey=CDS;gene=pmrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225934.1;locus_tag=NLI98_RS17245;product=two-component system response regulator PmrA;protein_id=WP_002895659.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3559855 3560952 . + . ID=gene-NLI98_RS17250;Name=pmrB;gbkey=Gene;gene=pmrB;gene_biotype=protein_coding;locus_tag=NLI98_RS17250;old_locus_tag=NLI98_17245 NZ_CP100601.1 Protein Homology CDS 3559855 3560952 . + 0 ID=cds-WP_032445761.1;Parent=gene-NLI98_RS17250;Dbxref=Genbank:WP_032445761.1;Name=WP_032445761.1;gbkey=CDS;gene=pmrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004111547.1;locus_tag=NLI98_RS17250;product=two-component system sensor histidine kinase PmrB;protein_id=WP_032445761.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3561201 3563222 . - . ID=gene-NLI98_RS17255;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=NLI98_RS17255;old_locus_tag=NLI98_17250 NZ_CP100601.1 Protein Homology CDS 3561201 3563222 . - 0 ID=cds-WP_002895655.1;Parent=gene-NLI98_RS17255;Dbxref=Genbank:WP_002895655.1;Name=WP_002895655.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123745.1;locus_tag=NLI98_RS17255;product=excinuclease ABC subunit UvrB;protein_id=WP_002895655.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3563634 3563846 . + . ID=gene-NLI98_RS17260;Name=NLI98_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17260;old_locus_tag=NLI98_17255 NZ_CP100601.1 Protein Homology CDS 3563634 3563846 . + 0 ID=cds-WP_016831283.1;Parent=gene-NLI98_RS17260;Dbxref=Genbank:WP_016831283.1;Name=WP_016831283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225931.1;locus_tag=NLI98_RS17260;product=hypothetical protein;protein_id=WP_016831283.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3563933 3564655 . + . ID=gene-NLI98_RS17265;Name=NLI98_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17265;old_locus_tag=NLI98_17260 NZ_CP100601.1 Protein Homology CDS 3563933 3564655 . + 0 ID=cds-WP_088498566.1;Parent=gene-NLI98_RS17265;Dbxref=Genbank:WP_088498566.1;Name=WP_088498566.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900923.1;locus_tag=NLI98_RS17265;product=ATP-binding cassette domain-containing protein;protein_id=WP_088498566.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3564597 3565319 . - . ID=gene-NLI98_RS17270;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=NLI98_RS17270;old_locus_tag=NLI98_17265 NZ_CP100601.1 Protein Homology CDS 3564597 3565319 . - 0 ID=cds-WP_002895648.1;Parent=gene-NLI98_RS17270;Dbxref=Genbank:WP_002895648.1;Name=WP_002895648.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225930.1;locus_tag=NLI98_RS17270;product=dethiobiotin synthase;protein_id=WP_002895648.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3565312 3566067 . - . ID=gene-NLI98_RS17275;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=NLI98_RS17275;old_locus_tag=NLI98_17270 NZ_CP100601.1 Protein Homology CDS 3565312 3566067 . - 0 ID=cds-WP_004893301.1;Parent=gene-NLI98_RS17275;Dbxref=Genbank:WP_004893301.1;Name=WP_004893301.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225929.1;locus_tag=NLI98_RS17275;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_004893301.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3566051 3567208 . - . ID=gene-NLI98_RS17280;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=NLI98_RS17280;old_locus_tag=NLI98_17275 NZ_CP100601.1 Protein Homology CDS 3566051 3567208 . - 0 ID=cds-WP_048264444.1;Parent=gene-NLI98_RS17280;Dbxref=Genbank:WP_048264444.1;Name=WP_048264444.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225928.1;locus_tag=NLI98_RS17280;product=8-amino-7-oxononanoate synthase;protein_id=WP_048264444.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3567205 3568245 . - . ID=gene-NLI98_RS17285;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=NLI98_RS17285;old_locus_tag=NLI98_17280 NZ_CP100601.1 Protein Homology CDS 3567205 3568245 . - 0 ID=cds-WP_071003357.1;Parent=gene-NLI98_RS17285;Dbxref=Genbank:WP_071003357.1;Name=WP_071003357.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415296.1;locus_tag=NLI98_RS17285;product=biotin synthase BioB;protein_id=WP_071003357.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3568459 3569748 . + . ID=gene-NLI98_RS17290;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=NLI98_RS17290;old_locus_tag=NLI98_17285 NZ_CP100601.1 Protein Homology CDS 3568459 3569748 . + 0 ID=cds-WP_032105415.1;Parent=gene-NLI98_RS17290;Dbxref=Genbank:WP_032105415.1;Name=WP_032105415.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225926.1;locus_tag=NLI98_RS17290;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_032105415.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3569819 3570295 . + . ID=gene-NLI98_RS17295;Name=NLI98_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17295;old_locus_tag=NLI98_17290 NZ_CP100601.1 Protein Homology CDS 3569819 3570295 . + 0 ID=cds-WP_002895575.1;Parent=gene-NLI98_RS17295;Dbxref=Genbank:WP_002895575.1;Name=WP_002895575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225925.1;locus_tag=NLI98_RS17295;product=kinase inhibitor;protein_id=WP_002895575.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3570535 3571917 . - . ID=gene-NLI98_RS17300;Name=NLI98_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17300;old_locus_tag=NLI98_17295 NZ_CP100601.1 Protein Homology CDS 3570535 3571917 . - 0 ID=cds-WP_004142109.1;Parent=gene-NLI98_RS17300;Dbxref=Genbank:WP_004142109.1;Name=WP_004142109.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225924.1;locus_tag=NLI98_RS17300;product=amino acid permease;protein_id=WP_004142109.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3572016 3573542 . - . ID=gene-NLI98_RS17305;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=NLI98_RS17305;old_locus_tag=NLI98_17300 NZ_CP100601.1 Protein Homology CDS 3572016 3573542 . - 0 ID=cds-WP_088498567.1;Parent=gene-NLI98_RS17305;Dbxref=Genbank:WP_088498567.1;Name=WP_088498567.1;Ontology_term=GO:0006548,GO:0004397;gbkey=CDS;gene=hutH;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225923.1;locus_tag=NLI98_RS17305;product=histidine ammonia-lyase;protein_id=WP_088498567.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3573539 3575227 . - . ID=gene-NLI98_RS17310;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=NLI98_RS17310;old_locus_tag=NLI98_17305 NZ_CP100601.1 Protein Homology CDS 3573539 3575227 . - 0 ID=cds-WP_088498568.1;Parent=gene-NLI98_RS17310;Dbxref=Genbank:WP_088498568.1;Name=WP_088498568.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367623.1;locus_tag=NLI98_RS17310;product=urocanate hydratase;protein_id=WP_088498568.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3575370 3576095 . - . ID=gene-NLI98_RS17315;Name=NLI98_RS17315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17315;old_locus_tag=NLI98_17310 NZ_CP100601.1 Protein Homology CDS 3575370 3576095 . - 0 ID=cds-WP_002895358.1;Parent=gene-NLI98_RS17315;Dbxref=Genbank:WP_002895358.1;Name=WP_002895358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225920.1;locus_tag=NLI98_RS17315;product=histidine utilization repressor;protein_id=WP_002895358.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3576157 3577113 . - . ID=gene-NLI98_RS17320;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=NLI98_RS17320;old_locus_tag=NLI98_17315 NZ_CP100601.1 Protein Homology CDS 3576157 3577113 . - 0 ID=cds-WP_023159388.1;Parent=gene-NLI98_RS17320;Dbxref=Genbank:WP_023159388.1;Name=WP_023159388.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225919.1;locus_tag=NLI98_RS17320;product=formimidoylglutamase;protein_id=WP_023159388.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3577110 3578429 . - . ID=gene-NLI98_RS17325;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=NLI98_RS17325;old_locus_tag=NLI98_17320 NZ_CP100601.1 Protein Homology CDS 3577110 3578429 . - 0 ID=cds-WP_172676894.1;Parent=gene-NLI98_RS17325;Dbxref=Genbank:WP_172676894.1;Name=WP_172676894.1;Ontology_term=GO:0006548,GO:0050480;gbkey=CDS;gene=hutI;go_function=imidazolonepropionase activity|0050480||IEA;go_process=histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225918.1;locus_tag=NLI98_RS17325;product=imidazolonepropionase;protein_id=WP_172676894.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3578584 3579867 . + . ID=gene-NLI98_RS17330;Name=NLI98_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17330;old_locus_tag=NLI98_17325 NZ_CP100601.1 Protein Homology CDS 3578584 3579867 . + 0 ID=cds-WP_088498570.1;Parent=gene-NLI98_RS17330;Dbxref=Genbank:WP_088498570.1;Name=WP_088498570.1;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225917.1;locus_tag=NLI98_RS17330;product=putative acyl-CoA thioester hydrolase;protein_id=WP_088498570.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3580141 3582828 . - . ID=gene-NLI98_RS17335;Name=NLI98_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17335;old_locus_tag=NLI98_17330 NZ_CP100601.1 Protein Homology CDS 3580141 3582828 . - 0 ID=cds-WP_088498571.1;Parent=gene-NLI98_RS17335;Dbxref=Genbank:WP_088498571.1;Name=WP_088498571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004122206.1;locus_tag=NLI98_RS17335;product=cation-transporting P-type ATPase;protein_id=WP_088498571.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3582880 3583311 . - . ID=gene-NLI98_RS17340;Name=NLI98_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17340;old_locus_tag=NLI98_17335 NZ_CP100601.1 Protein Homology CDS 3582880 3583311 . - 0 ID=cds-WP_004183465.1;Parent=gene-NLI98_RS17340;Dbxref=Genbank:WP_004183465.1;Name=WP_004183465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705952.1;locus_tag=NLI98_RS17340;product=universal stress protein;protein_id=WP_004183465.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3583845 3584930 . + . ID=gene-NLI98_RS17345;Name=NLI98_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17345;old_locus_tag=NLI98_17340 NZ_CP100601.1 Protein Homology CDS 3583845 3584930 . + 0 ID=cds-WP_023283453.1;Parent=gene-NLI98_RS17345;Dbxref=Genbank:WP_023283453.1;Name=WP_023283453.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004223727.1;locus_tag=NLI98_RS17345;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_023283453.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3584931 3587996 . + . ID=gene-NLI98_RS17350;Name=NLI98_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17350;old_locus_tag=NLI98_17345 NZ_CP100601.1 Protein Homology CDS 3584931 3587996 . + 0 ID=cds-WP_023283452.1;Parent=gene-NLI98_RS17350;Dbxref=Genbank:WP_023283452.1;Name=WP_023283452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705951.1;locus_tag=NLI98_RS17350;product=efflux RND transporter permease subunit;protein_id=WP_023283452.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3588035 3588958 . + . ID=gene-NLI98_RS17355;Name=NLI98_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17355;old_locus_tag=NLI98_17350 NZ_CP100601.1 Protein Homology CDS 3588035 3588958 . + 0 ID=cds-WP_002895284.1;Parent=gene-NLI98_RS17355;Dbxref=Genbank:WP_002895284.1;Name=WP_002895284.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225915.1;locus_tag=NLI98_RS17355;product=acyltransferase family protein;protein_id=WP_002895284.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3588975 3589481 . - . ID=gene-NLI98_RS17360;Name=NLI98_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17360;old_locus_tag=NLI98_17355 NZ_CP100601.1 Protein Homology CDS 3588975 3589481 . - 0 ID=cds-WP_002895283.1;Parent=gene-NLI98_RS17360;Dbxref=Genbank:WP_002895283.1;Name=WP_002895283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225914.1;locus_tag=NLI98_RS17360;product=hypothetical protein;protein_id=WP_002895283.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3589685 3589831 . - . ID=gene-NLI98_RS17365;Name=NLI98_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17365;old_locus_tag=NLI98_17360 NZ_CP100601.1 Protein Homology CDS 3589685 3589831 . - 0 ID=cds-WP_009483834.1;Parent=gene-NLI98_RS17365;Dbxref=Genbank:WP_009483834.1;Name=WP_009483834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225913.1;locus_tag=NLI98_RS17365;product=hypothetical protein;protein_id=WP_009483834.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3590216 3590428 . + . ID=gene-NLI98_RS17370;Name=NLI98_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17370;old_locus_tag=NLI98_17365 NZ_CP100601.1 Protein Homology CDS 3590216 3590428 . + 0 ID=cds-WP_002895280.1;Parent=gene-NLI98_RS17370;Dbxref=Genbank:WP_002895280.1;Name=WP_002895280.1;Ontology_term=GO:0071468;gbkey=CDS;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225912.1;locus_tag=NLI98_RS17370;product=biofilm development regulator YmgB/AriR family protein;protein_id=WP_002895280.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3590510 3591064 . + . ID=gene-NLI98_RS17375;Name=NLI98_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17375;old_locus_tag=NLI98_17370 NZ_CP100601.1 Protein Homology CDS 3590510 3591064 . + 0 ID=cds-WP_004151695.1;Parent=gene-NLI98_RS17375;Dbxref=Genbank:WP_004151695.1;Name=WP_004151695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225911.1;locus_tag=NLI98_RS17375;product=helix-turn-helix transcriptional regulator;protein_id=WP_004151695.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3591106 3591840 . - . ID=gene-NLI98_RS17380;Name=NLI98_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17380;old_locus_tag=NLI98_17375 NZ_CP100601.1 Protein Homology CDS 3591106 3591840 . - 0 ID=cds-WP_004176830.1;Parent=gene-NLI98_RS17380;Dbxref=Genbank:WP_004176830.1;Name=WP_004176830.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225910.1;locus_tag=NLI98_RS17380;product=MerR family transcriptional regulator;protein_id=WP_004176830.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3591996 3593207 . - . ID=gene-NLI98_RS17385;Name=NLI98_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17385;old_locus_tag=NLI98_17380 NZ_CP100601.1 Protein Homology CDS 3591996 3593207 . - 0 ID=cds-WP_088498572.1;Parent=gene-NLI98_RS17385;Dbxref=Genbank:WP_088498572.1;Name=WP_088498572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225909.1;locus_tag=NLI98_RS17385;product=diguanylate phosphodiesterase;protein_id=WP_088498572.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3593536 3593781 . + . ID=gene-NLI98_RS17390;Name=ycgZ;gbkey=Gene;gene=ycgZ;gene_biotype=protein_coding;locus_tag=NLI98_RS17390;old_locus_tag=NLI98_17385 NZ_CP100601.1 Protein Homology CDS 3593536 3593781 . + 0 ID=cds-WP_004151693.1;Parent=gene-NLI98_RS17390;Dbxref=Genbank:WP_004151693.1;Name=WP_004151693.1;gbkey=CDS;gene=ycgZ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225908.1;locus_tag=NLI98_RS17390;product=regulatory protein YcgZ;protein_id=WP_004151693.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3593909 3594214 . + . ID=gene-NLI98_RS17395;Name=NLI98_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17395;old_locus_tag=NLI98_17390 NZ_CP100601.1 Protein Homology CDS 3593909 3594214 . + 0 ID=cds-WP_004147654.1;Parent=gene-NLI98_RS17395;Dbxref=Genbank:WP_004147654.1;Name=WP_004147654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004147654.1;locus_tag=NLI98_RS17395;product=hypothetical protein;protein_id=WP_004147654.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3594266 3594532 . + . ID=gene-NLI98_RS17400;Name=NLI98_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17400;old_locus_tag=NLI98_17395 NZ_CP100601.1 Protein Homology CDS 3594266 3594532 . + 0 ID=cds-WP_002895168.1;Parent=gene-NLI98_RS17400;Dbxref=Genbank:WP_002895168.1;Name=WP_002895168.1;Ontology_term=GO:0071468;gbkey=CDS;go_process=cellular response to acidic pH|0071468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225906.1;locus_tag=NLI98_RS17400;product=biofilm development regulator YmgB/AriR family protein;protein_id=WP_002895168.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3594643 3595638 . - . ID=gene-NLI98_RS17405;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=NLI98_RS17405;old_locus_tag=NLI98_17400 NZ_CP100601.1 Protein Homology CDS 3594643 3595638 . - 0 ID=cds-WP_004183458.1;Parent=gene-NLI98_RS17405;Dbxref=Genbank:WP_004183458.1;Name=WP_004183458.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225905.1;locus_tag=NLI98_RS17405;product=6-phosphogluconolactonase;protein_id=WP_004183458.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3595867 3596685 . + . ID=gene-NLI98_RS17410;Name=NLI98_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17410;old_locus_tag=NLI98_17405 NZ_CP100601.1 Protein Homology CDS 3595867 3596685 . + 0 ID=cds-WP_002895164.1;Parent=gene-NLI98_RS17410;Dbxref=Genbank:WP_002895164.1;Name=WP_002895164.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225904.1;locus_tag=NLI98_RS17410;product=pyridoxal phosphatase;protein_id=WP_002895164.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3596686 3597744 . - . ID=gene-NLI98_RS17415;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=NLI98_RS17415;old_locus_tag=NLI98_17410 NZ_CP100601.1 Protein Homology CDS 3596686 3597744 . - 0 ID=cds-WP_004176832.1;Parent=gene-NLI98_RS17415;Dbxref=Genbank:WP_004176832.1;Name=WP_004176832.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225903.1;locus_tag=NLI98_RS17415;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_004176832.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3597747 3598436 . - . ID=gene-NLI98_RS17420;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=NLI98_RS17420;old_locus_tag=NLI98_17415 NZ_CP100601.1 Protein Homology CDS 3597747 3598436 . - 0 ID=cds-WP_002895159.1;Parent=gene-NLI98_RS17420;Dbxref=Genbank:WP_002895159.1;Name=WP_002895159.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225902.1;locus_tag=NLI98_RS17420;product=molybdate ABC transporter permease subunit;protein_id=WP_002895159.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3598436 3599209 . - . ID=gene-NLI98_RS17425;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=NLI98_RS17425;old_locus_tag=NLI98_17420 NZ_CP100601.1 Protein Homology CDS 3598436 3599209 . - 0 ID=cds-WP_023312865.1;Parent=gene-NLI98_RS17425;Dbxref=Genbank:WP_023312865.1;Name=WP_023312865.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225901.1;locus_tag=NLI98_RS17425;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_023312865.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3599352 3599501 . - . ID=gene-NLI98_RS17430;Name=NLI98_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17430;old_locus_tag=NLI98_17425 NZ_CP100601.1 Protein Homology CDS 3599352 3599501 . - 0 ID=cds-WP_002895156.1;Parent=gene-NLI98_RS17430;Dbxref=Genbank:WP_002895156.1;Name=WP_002895156.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225900.1;locus_tag=NLI98_RS17430;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_002895156.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3599654 3600442 . + . ID=gene-NLI98_RS17435;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=NLI98_RS17435;old_locus_tag=NLI98_17430 NZ_CP100601.1 Protein Homology CDS 3599654 3600442 . + 0 ID=cds-WP_002895154.1;Parent=gene-NLI98_RS17435;Dbxref=Genbank:WP_002895154.1;Name=WP_002895154.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225899.1;locus_tag=NLI98_RS17435;product=molybdenum-dependent transcriptional regulator;protein_id=WP_002895154.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3600510 3601982 . + . ID=gene-NLI98_RS17440;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=NLI98_RS17440;old_locus_tag=NLI98_17435 NZ_CP100601.1 Protein Homology CDS 3600510 3601982 . + 0 ID=cds-WP_088498573.1;Parent=gene-NLI98_RS17440;Dbxref=Genbank:WP_088498573.1;Name=WP_088498573.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542418.1;locus_tag=NLI98_RS17440;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_088498573.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3602192 3603208 . + . ID=gene-NLI98_RS17445;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=NLI98_RS17445;old_locus_tag=NLI98_17440 NZ_CP100601.1 Protein Homology CDS 3602192 3603208 . + 0 ID=cds-WP_002895150.1;Parent=gene-NLI98_RS17445;Dbxref=Genbank:WP_002895150.1;Name=WP_002895150.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225895.1;locus_tag=NLI98_RS17445;product=UDP-glucose 4-epimerase GalE;protein_id=WP_002895150.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3603218 3604264 . + . ID=gene-NLI98_RS17450;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=NLI98_RS17450;old_locus_tag=NLI98_17445 NZ_CP100601.1 Protein Homology CDS 3603218 3604264 . + 0 ID=cds-WP_004142166.1;Parent=gene-NLI98_RS17450;Dbxref=Genbank:WP_004142166.1;Name=WP_004142166.1;Ontology_term=GO:0006012,GO:0008108;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225894.1;locus_tag=NLI98_RS17450;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_004142166.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3604267 3605415 . + . ID=gene-NLI98_RS17455;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=NLI98_RS17455;old_locus_tag=NLI98_17450 NZ_CP100601.1 Protein Homology CDS 3604267 3605415 . + 0 ID=cds-WP_040168856.1;Parent=gene-NLI98_RS17455;Dbxref=Genbank:WP_040168856.1;Name=WP_040168856.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001713229.1;locus_tag=NLI98_RS17455;product=galactokinase;protein_id=WP_040168856.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3605409 3606452 . + . ID=gene-NLI98_RS17460;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=NLI98_RS17460;old_locus_tag=NLI98_17455 NZ_CP100601.1 Protein Homology CDS 3605409 3606452 . + 0 ID=cds-WP_040223535.1;Parent=gene-NLI98_RS17460;Dbxref=Genbank:WP_040223535.1;Name=WP_040223535.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225892.1;locus_tag=NLI98_RS17460;product=galactose-1-epimerase;protein_id=WP_040223535.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3606744 3607496 . + . ID=gene-NLI98_RS17465;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=NLI98_RS17465;old_locus_tag=NLI98_17460 NZ_CP100601.1 Protein Homology CDS 3606744 3607496 . + 0 ID=cds-WP_002895089.1;Parent=gene-NLI98_RS17465;Dbxref=Genbank:WP_002895089.1;Name=WP_002895089.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=NLI98_RS17465;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_002895089.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3607570 3608622 . - . ID=gene-NLI98_RS17470;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=NLI98_RS17470;old_locus_tag=NLI98_17465 NZ_CP100601.1 Protein Homology CDS 3607570 3608622 . - 0 ID=cds-WP_023159399.1;Parent=gene-NLI98_RS17470;Dbxref=Genbank:WP_023159399.1;Name=WP_023159399.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001109196.1;locus_tag=NLI98_RS17470;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_023159399.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3608937 3609302 . + . ID=gene-NLI98_RS17475;Name=NLI98_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17475;old_locus_tag=NLI98_17470 NZ_CP100601.1 Protein Homology CDS 3608937 3609302 . + 0 ID=cds-WP_002895084.1;Parent=gene-NLI98_RS17475;Dbxref=Genbank:WP_002895084.1;Name=WP_002895084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225889.1;locus_tag=NLI98_RS17475;product=protein YbgS;protein_id=WP_002895084.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3609420 3610364 . + . ID=gene-NLI98_RS17480;Name=zitB;gbkey=Gene;gene=zitB;gene_biotype=protein_coding;locus_tag=NLI98_RS17480;old_locus_tag=NLI98_17475 NZ_CP100601.1 Protein Homology CDS 3609420 3610364 . + 0 ID=cds-WP_032419747.1;Parent=gene-NLI98_RS17480;Dbxref=Genbank:WP_032419747.1;Name=WP_032419747.1;Ontology_term=GO:0006829,GO:0055085,GO:0005385,GO:0016020;gbkey=CDS;gene=zitB;go_component=membrane|0016020||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transport|0006829||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225888.1;locus_tag=NLI98_RS17480;product=CDF family zinc transporter ZitB;protein_id=WP_032419747.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3610361 3611080 . - . ID=gene-NLI98_RS17485;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=NLI98_RS17485;old_locus_tag=NLI98_17480 NZ_CP100601.1 Protein Homology CDS 3610361 3611080 . - 0 ID=cds-WP_004151689.1;Parent=gene-NLI98_RS17485;Dbxref=Genbank:WP_004151689.1;Name=WP_004151689.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004223702.1;locus_tag=NLI98_RS17485;product=nicotinamide riboside transporter PnuC;protein_id=WP_004151689.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3611116 3612159 . - . ID=gene-NLI98_RS17490;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=NLI98_RS17490;old_locus_tag=NLI98_17485 NZ_CP100601.1 Protein Homology CDS 3611116 3612159 . - 0 ID=cds-WP_002895074.1;Parent=gene-NLI98_RS17490;Dbxref=Genbank:WP_002895074.1;Name=WP_002895074.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004176847.1;locus_tag=NLI98_RS17490;product=quinolinate synthase NadA;protein_id=WP_002895074.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3612229 3612378 . + . ID=gene-NLI98_RS17495;Name=NLI98_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17495;old_locus_tag=NLI98_17490 NZ_CP100601.1 Protein Homology CDS 3612229 3612378 . + 0 ID=cds-WP_032409073.1;Parent=gene-NLI98_RS17495;Dbxref=Genbank:WP_032409073.1;Name=WP_032409073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225885.1;locus_tag=NLI98_RS17495;product=hypothetical protein;protein_id=WP_032409073.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3612723 3612798 . - . ID=gene-NLI98_RS17500;Name=NLI98_RS17500;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS17500;old_locus_tag=NLI98_17495 NZ_CP100601.1 tRNAscan-SE tRNA 3612723 3612798 . - . ID=rna-NLI98_RS17500;Parent=gene-NLI98_RS17500;anticodon=(pos:complement(3612763..3612765));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17500;product=tRNA-Lys NZ_CP100601.1 tRNAscan-SE exon 3612723 3612798 . - . ID=exon-NLI98_RS17500-1;Parent=rna-NLI98_RS17500;anticodon=(pos:complement(3612763..3612765));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17500;product=tRNA-Lys NZ_CP100601.1 RefSeq gene 3612932 3613007 . - . ID=gene-NLI98_RS17505;Name=NLI98_RS17505;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS17505;old_locus_tag=NLI98_17500 NZ_CP100601.1 tRNAscan-SE tRNA 3612932 3613007 . - . ID=rna-NLI98_RS17505;Parent=gene-NLI98_RS17505;anticodon=(pos:complement(3612972..3612974));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17505;product=tRNA-Lys NZ_CP100601.1 tRNAscan-SE exon 3612932 3613007 . - . ID=exon-NLI98_RS17505-1;Parent=rna-NLI98_RS17505;anticodon=(pos:complement(3612972..3612974));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17505;product=tRNA-Lys NZ_CP100601.1 RefSeq gene 3613154 3613229 . - . ID=gene-NLI98_RS17510;Name=NLI98_RS17510;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS17510;old_locus_tag=NLI98_17505 NZ_CP100601.1 tRNAscan-SE tRNA 3613154 3613229 . - . ID=rna-NLI98_RS17510;Parent=gene-NLI98_RS17510;anticodon=(pos:complement(3613194..3613196));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17510;product=tRNA-Lys NZ_CP100601.1 tRNAscan-SE exon 3613154 3613229 . - . ID=exon-NLI98_RS17510-1;Parent=rna-NLI98_RS17510;anticodon=(pos:complement(3613194..3613196));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17510;product=tRNA-Lys NZ_CP100601.1 RefSeq gene 3613233 3613308 . - . ID=gene-NLI98_RS17515;Name=NLI98_RS17515;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS17515;old_locus_tag=NLI98_17510 NZ_CP100601.1 tRNAscan-SE tRNA 3613233 3613308 . - . ID=rna-NLI98_RS17515;Parent=gene-NLI98_RS17515;anticodon=(pos:complement(3613273..3613275));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17515;product=tRNA-Val NZ_CP100601.1 tRNAscan-SE exon 3613233 3613308 . - . ID=exon-NLI98_RS17515-1;Parent=rna-NLI98_RS17515;anticodon=(pos:complement(3613273..3613275));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17515;product=tRNA-Val NZ_CP100601.1 RefSeq gene 3613458 3613533 . - . ID=gene-NLI98_RS17520;Name=NLI98_RS17520;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS17520;old_locus_tag=NLI98_17515 NZ_CP100601.1 tRNAscan-SE tRNA 3613458 3613533 . - . ID=rna-NLI98_RS17520;Parent=gene-NLI98_RS17520;anticodon=(pos:complement(3613498..3613500));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17520;product=tRNA-Lys NZ_CP100601.1 tRNAscan-SE exon 3613458 3613533 . - . ID=exon-NLI98_RS17520-1;Parent=rna-NLI98_RS17520;anticodon=(pos:complement(3613498..3613500));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17520;product=tRNA-Lys NZ_CP100601.1 RefSeq gene 3613536 3613611 . - . ID=gene-NLI98_RS17525;Name=NLI98_RS17525;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS17525;old_locus_tag=NLI98_17520 NZ_CP100601.1 tRNAscan-SE tRNA 3613536 3613611 . - . ID=rna-NLI98_RS17525;Parent=gene-NLI98_RS17525;anticodon=(pos:complement(3613576..3613578));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17525;product=tRNA-Val NZ_CP100601.1 tRNAscan-SE exon 3613536 3613611 . - . ID=exon-NLI98_RS17525-1;Parent=rna-NLI98_RS17525;anticodon=(pos:complement(3613576..3613578));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17525;product=tRNA-Val NZ_CP100601.1 RefSeq gene 3613737 3613812 . - . ID=gene-NLI98_RS17530;Name=NLI98_RS17530;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS17530;old_locus_tag=NLI98_17525 NZ_CP100601.1 tRNAscan-SE tRNA 3613737 3613812 . - . ID=rna-NLI98_RS17530;Parent=gene-NLI98_RS17530;anticodon=(pos:complement(3613777..3613779));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17530;product=tRNA-Lys NZ_CP100601.1 tRNAscan-SE exon 3613737 3613812 . - . ID=exon-NLI98_RS17530-1;Parent=rna-NLI98_RS17530;anticodon=(pos:complement(3613777..3613779));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17530;product=tRNA-Lys NZ_CP100601.1 RefSeq gene 3613974 3614768 . - . ID=gene-NLI98_RS17535;Name=cpoB;gbkey=Gene;gene=cpoB;gene_biotype=protein_coding;locus_tag=NLI98_RS17535;old_locus_tag=NLI98_17530 NZ_CP100601.1 Protein Homology CDS 3613974 3614768 . - 0 ID=cds-WP_002895071.1;Parent=gene-NLI98_RS17535;Dbxref=Genbank:WP_002895071.1;Name=WP_002895071.1;Ontology_term=GO:0051301,GO:0070206,GO:0005515;gbkey=CDS;gene=cpoB;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA,protein trimerization|0070206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225884.1;locus_tag=NLI98_RS17535;product=cell division protein CpoB;protein_id=WP_002895071.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3614778 3615302 . - . ID=gene-NLI98_RS17540;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=NLI98_RS17540;old_locus_tag=NLI98_17535 NZ_CP100601.1 Protein Homology CDS 3614778 3615302 . - 0 ID=cds-WP_002895068.1;Parent=gene-NLI98_RS17540;Dbxref=Genbank:WP_002895068.1;Name=WP_002895068.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225883.1;locus_tag=NLI98_RS17540;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_002895068.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3615337 3616629 . - . ID=gene-NLI98_RS17545;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=NLI98_RS17545;old_locus_tag=NLI98_17540 NZ_CP100601.1 Protein Homology CDS 3615337 3616629 . - 0 ID=cds-WP_023283446.1;Parent=gene-NLI98_RS17545;Dbxref=Genbank:WP_023283446.1;Name=WP_023283446.1;Ontology_term=GO:0006810,GO:0005215,GO:0030288;gbkey=CDS;gene=tolB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001646851.1;locus_tag=NLI98_RS17545;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_023283446.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3616759 3618084 . - . ID=gene-NLI98_RS17550;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=NLI98_RS17550;old_locus_tag=NLI98_17545 NZ_CP100601.1 Protein Homology CDS 3616759 3618084 . - 0 ID=cds-WP_004179068.1;Parent=gene-NLI98_RS17550;Dbxref=Genbank:WP_004179068.1;Name=WP_004179068.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225881.1;locus_tag=NLI98_RS17550;product=cell envelope integrity protein TolA;protein_id=WP_004179068.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3618184 3618612 . - . ID=gene-NLI98_RS17555;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=NLI98_RS17555;old_locus_tag=NLI98_17550 NZ_CP100601.1 Protein Homology CDS 3618184 3618612 . - 0 ID=cds-WP_002895061.1;Parent=gene-NLI98_RS17555;Dbxref=Genbank:WP_002895061.1;Name=WP_002895061.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965300.1;locus_tag=NLI98_RS17555;product=colicin uptake protein TolR;protein_id=WP_002895061.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3618616 3619308 . - . ID=gene-NLI98_RS17560;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=NLI98_RS17560;old_locus_tag=NLI98_17555 NZ_CP100601.1 Protein Homology CDS 3618616 3619308 . - 0 ID=cds-WP_004152221.1;Parent=gene-NLI98_RS17560;Dbxref=Genbank:WP_004152221.1;Name=WP_004152221.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225879.1;locus_tag=NLI98_RS17560;product=Tol-Pal system protein TolQ;protein_id=WP_004152221.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3619305 3619709 . - . ID=gene-NLI98_RS17565;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=NLI98_RS17565;old_locus_tag=NLI98_17560 NZ_CP100601.1 Protein Homology CDS 3619305 3619709 . - 0 ID=cds-WP_002895056.1;Parent=gene-NLI98_RS17565;Dbxref=Genbank:WP_002895056.1;Name=WP_002895056.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308798.1;locus_tag=NLI98_RS17565;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_002895056.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3619859 3620149 . - . ID=gene-NLI98_RS17570;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=NLI98_RS17570;old_locus_tag=NLI98_17565 NZ_CP100601.1 Protein Homology CDS 3619859 3620149 . - 0 ID=cds-WP_002895053.1;Parent=gene-NLI98_RS17570;Dbxref=Genbank:WP_002895053.1;Name=WP_002895053.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225877.1;locus_tag=NLI98_RS17570;product=cyd operon protein YbgE;protein_id=WP_002895053.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3620149 3620265 . - . ID=gene-NLI98_RS17575;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=NLI98_RS17575;old_locus_tag=NLI98_17570 NZ_CP100601.1 Protein Homology CDS 3620149 3620265 . - 0 ID=cds-WP_002895051.1;Parent=gene-NLI98_RS17575;Dbxref=Genbank:WP_002895051.1;Name=WP_002895051.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225876.1;locus_tag=NLI98_RS17575;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_002895051.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3620281 3621420 . - . ID=gene-NLI98_RS17580;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=NLI98_RS17580;old_locus_tag=NLI98_17575 NZ_CP100601.1 Protein Homology CDS 3620281 3621420 . - 0 ID=cds-WP_002895049.1;Parent=gene-NLI98_RS17580;Dbxref=Genbank:WP_002895049.1;Name=WP_002895049.1;Ontology_term=GO:0016020;gbkey=CDS;gene=cydB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000568269.1;locus_tag=NLI98_RS17580;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_002895049.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3621436 3623004 . - . ID=gene-NLI98_RS17585;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=NLI98_RS17585;old_locus_tag=NLI98_17580 NZ_CP100601.1 Protein Homology CDS 3621436 3623004 . - 0 ID=cds-WP_002895047.1;Parent=gene-NLI98_RS17585;Dbxref=Genbank:WP_002895047.1;Name=WP_002895047.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225874.1;locus_tag=NLI98_RS17585;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_002895047.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3623829 3624698 . - . ID=gene-NLI98_RS17590;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=NLI98_RS17590;old_locus_tag=NLI98_17585 NZ_CP100601.1 Protein Homology CDS 3623829 3624698 . - 0 ID=cds-WP_002895043.1;Parent=gene-NLI98_RS17590;Dbxref=Genbank:WP_002895043.1;Name=WP_002895043.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225872.1;locus_tag=NLI98_RS17590;product=succinate--CoA ligase subunit alpha;protein_id=WP_002895043.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3624698 3625864 . - . ID=gene-NLI98_RS17595;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=NLI98_RS17595;old_locus_tag=NLI98_17590 NZ_CP100601.1 Protein Homology CDS 3624698 3625864 . - 0 ID=cds-WP_002895039.1;Parent=gene-NLI98_RS17595;Dbxref=Genbank:WP_002895039.1;Name=WP_002895039.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=NLI98_RS17595;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_002895039.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3625968 3627194 . - . ID=gene-NLI98_RS17600;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=NLI98_RS17600;old_locus_tag=NLI98_17595 NZ_CP100601.1 Protein Homology CDS 3625968 3627194 . - 0 ID=cds-WP_004142209.1;Parent=gene-NLI98_RS17600;Dbxref=Genbank:WP_004142209.1;Name=WP_004142209.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225870.1;locus_tag=NLI98_RS17600;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_004142209.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3627209 3630016 . - . ID=gene-NLI98_RS17605;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=NLI98_RS17605;old_locus_tag=NLI98_17600 NZ_CP100601.1 Protein Homology CDS 3627209 3630016 . - 0 ID=cds-WP_004147623.1;Parent=gene-NLI98_RS17605;Dbxref=Genbank:WP_004147623.1;Name=WP_004147623.1;Ontology_term=GO:0006099,GO:0006554,GO:0006568,GO:0004591,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,lysine catabolic process|0006554||IEA,tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225869.1;locus_tag=NLI98_RS17605;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_004147623.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3630398 3631114 . - . ID=gene-NLI98_RS17610;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=NLI98_RS17610;old_locus_tag=NLI98_17605 NZ_CP100601.1 Protein Homology CDS 3630398 3631114 . - 0 ID=cds-WP_002894954.1;Parent=gene-NLI98_RS17610;Dbxref=Genbank:WP_002894954.1;Name=WP_002894954.1;gbkey=CDS;gene=sdhB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=NLI98_RS17610;product=succinate dehydrogenase iron-sulfur subunit SdhB;protein_id=WP_002894954.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3631130 3632896 . - . ID=gene-NLI98_RS17615;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=NLI98_RS17615;old_locus_tag=NLI98_17610 NZ_CP100601.1 Protein Homology CDS 3631130 3632896 . - 0 ID=cds-WP_004179067.1;Parent=gene-NLI98_RS17615;Dbxref=Genbank:WP_004179067.1;Name=WP_004179067.1;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122549.1;locus_tag=NLI98_RS17615;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_004179067.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3632896 3633243 . - . ID=gene-NLI98_RS17620;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=NLI98_RS17620;old_locus_tag=NLI98_17615 NZ_CP100601.1 Protein Homology CDS 3632896 3633243 . - 0 ID=cds-WP_002894949.1;Parent=gene-NLI98_RS17620;Dbxref=Genbank:WP_002894949.1;Name=WP_002894949.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455938.1;locus_tag=NLI98_RS17620;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_002894949.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3633237 3633641 . - . ID=gene-NLI98_RS17625;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=NLI98_RS17625;old_locus_tag=NLI98_17620 NZ_CP100601.1 Protein Homology CDS 3633237 3633641 . - 0 ID=cds-WP_004142216.1;Parent=gene-NLI98_RS17625;Dbxref=Genbank:WP_004142216.1;Name=WP_004142216.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045281;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,succinate dehydrogenase complex|0045281||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000263334.1;locus_tag=NLI98_RS17625;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_004142216.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3634282 3635565 . + . ID=gene-NLI98_RS17630;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=NLI98_RS17630;old_locus_tag=NLI98_17625 NZ_CP100601.1 Protein Homology CDS 3634282 3635565 . + 0 ID=cds-WP_004183439.1;Parent=gene-NLI98_RS17630;Dbxref=Genbank:WP_004183439.1;Name=WP_004183439.1;Ontology_term=GO:0006099,GO:0004108;gbkey=CDS;gene=gltA;go_function=citrate (Si)-synthase activity|0004108||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225863.1;locus_tag=NLI98_RS17630;product=citrate synthase;protein_id=WP_004183439.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3635656 3636447 . - . ID=gene-NLI98_RS17635;Name=nei;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=NLI98_RS17635;old_locus_tag=NLI98_17630 NZ_CP100601.1 Protein Homology CDS 3635656 3636447 . - 0 ID=cds-WP_065888896.1;Parent=gene-NLI98_RS17635;Dbxref=Genbank:WP_065888896.1;Name=WP_065888896.1;Ontology_term=GO:0006281,GO:0000703,GO:0003677,GO:0008270,GO:0140078;gbkey=CDS;gene=nei;go_function=oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity|0000703||IEA,DNA binding|0003677||IEA,zinc ion binding|0008270||IEA,class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225861.1;locus_tag=NLI98_RS17635;product=endonuclease VIII;protein_id=WP_065888896.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3636463 3637107 . - . ID=gene-NLI98_RS17640;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=NLI98_RS17640;old_locus_tag=NLI98_17635 NZ_CP100601.1 Protein Homology CDS 3636463 3637107 . - 0 ID=cds-WP_040215844.1;Parent=gene-NLI98_RS17640;Dbxref=Genbank:WP_040215844.1;Name=WP_040215844.1;Ontology_term=GO:0030163;gbkey=CDS;gene=pcp;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225860.1;locus_tag=NLI98_RS17640;product=pyroglutamyl-peptidase I;protein_id=WP_040215844.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3637117 3638112 . - . ID=gene-NLI98_RS17645;Name=NLI98_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17645;old_locus_tag=NLI98_17640 NZ_CP100601.1 Protein Homology CDS 3637117 3638112 . - 0 ID=cds-WP_004176855.1;Parent=gene-NLI98_RS17645;Dbxref=Genbank:WP_004176855.1;Name=WP_004176855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225859.1;locus_tag=NLI98_RS17645;product=DUF979 domain-containing protein;protein_id=WP_004176855.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3638109 3638834 . - . ID=gene-NLI98_RS17650;Name=NLI98_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17650;old_locus_tag=NLI98_17645 NZ_CP100601.1 Protein Homology CDS 3638109 3638834 . - 0 ID=cds-WP_002894928.1;Parent=gene-NLI98_RS17650;Dbxref=Genbank:WP_002894928.1;Name=WP_002894928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225858.1;locus_tag=NLI98_RS17650;product=DUF969 domain-containing protein;protein_id=WP_002894928.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3638916 3639659 . - . ID=gene-NLI98_RS17655;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=NLI98_RS17655;old_locus_tag=NLI98_17650 NZ_CP100601.1 Protein Homology CDS 3638916 3639659 . - 0 ID=cds-WP_004176856.1;Parent=gene-NLI98_RS17655;Dbxref=Genbank:WP_004176856.1;Name=WP_004176856.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225857.1;locus_tag=NLI98_RS17655;product=5-oxoprolinase subunit PxpA;protein_id=WP_004176856.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3639649 3640581 . - . ID=gene-NLI98_RS17660;Name=NLI98_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17660;old_locus_tag=NLI98_17655 NZ_CP100601.1 Protein Homology CDS 3639649 3640581 . - 0 ID=cds-WP_004147614.1;Parent=gene-NLI98_RS17660;Dbxref=Genbank:WP_004147614.1;Name=WP_004147614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225856.1;locus_tag=NLI98_RS17660;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_004147614.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3640575 3641231 . - . ID=gene-NLI98_RS17665;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=NLI98_RS17665;old_locus_tag=NLI98_17660 NZ_CP100601.1 Protein Homology CDS 3640575 3641231 . - 0 ID=cds-WP_004176857.1;Parent=gene-NLI98_RS17665;Dbxref=Genbank:WP_004176857.1;Name=WP_004176857.1;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225855.1;locus_tag=NLI98_RS17665;product=5-oxoprolinase subunit PxpB;protein_id=WP_004176857.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3641246 3641989 . - . ID=gene-NLI98_RS17670;Name=NLI98_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17670;old_locus_tag=NLI98_17665 NZ_CP100601.1 Protein Homology CDS 3641246 3641989 . - 0 ID=cds-WP_004176858.1;Parent=gene-NLI98_RS17670;Dbxref=Genbank:WP_004176858.1;Name=WP_004176858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000798886.1;locus_tag=NLI98_RS17670;product=type 2 GTP cyclohydrolase I;protein_id=WP_004176858.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3642257 3643735 . + . ID=gene-NLI98_RS17675;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=NLI98_RS17675;old_locus_tag=NLI98_17670 NZ_CP100601.1 Protein Homology CDS 3642257 3643735 . + 0 ID=cds-WP_004199663.1;Parent=gene-NLI98_RS17675;Dbxref=Genbank:WP_004199663.1;Name=WP_004199663.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225853.1;locus_tag=NLI98_RS17675;product=dipeptide permease DtpD;protein_id=WP_004199663.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3643707 3645149 . - . ID=gene-NLI98_RS17680;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=NLI98_RS17680;old_locus_tag=NLI98_17675 NZ_CP100601.1 Protein Homology CDS 3643707 3645149 . - 0 ID=cds-WP_004147610.1;Parent=gene-NLI98_RS17680;Dbxref=Genbank:WP_004147610.1;Name=WP_004147610.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225852.1;locus_tag=NLI98_RS17680;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_004147610.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3645333 3645542 . - . ID=gene-NLI98_RS17685;Name=NLI98_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17685;old_locus_tag=NLI98_17680 NZ_CP100601.1 Protein Homology CDS 3645333 3645542 . - 0 ID=cds-WP_004142243.1;Parent=gene-NLI98_RS17685;Dbxref=Genbank:WP_004142243.1;Name=WP_004142243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225851.1;locus_tag=NLI98_RS17685;product=DUF2517 family protein;protein_id=WP_004142243.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3645849 3645938 . + . ID=gene-NLI98_RS17690;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=NLI98_RS17690;old_locus_tag=NLI98_17685 NZ_CP100601.1 Protein Homology CDS 3645849 3645938 . + 0 ID=cds-WP_020323459.1;Parent=gene-NLI98_RS17690;Dbxref=Genbank:WP_020323459.1;Name=WP_020323459.1;gbkey=CDS;gene=kdpF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_588443.1;locus_tag=NLI98_RS17690;product=K(+)-transporting ATPase subunit F;protein_id=WP_020323459.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3645938 3647617 . + . ID=gene-NLI98_RS17695;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=NLI98_RS17695;old_locus_tag=NLI98_17690 NZ_CP100601.1 Protein Homology CDS 3645938 3647617 . + 0 ID=cds-WP_004142245.1;Parent=gene-NLI98_RS17695;Dbxref=Genbank:WP_004142245.1;Name=WP_004142245.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225850.1;locus_tag=NLI98_RS17695;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_004142245.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3647638 3649686 . + . ID=gene-NLI98_RS17700;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=NLI98_RS17700;old_locus_tag=NLI98_17695 NZ_CP100601.1 Protein Homology CDS 3647638 3649686 . + 0 ID=cds-WP_040215845.1;Parent=gene-NLI98_RS17700;Dbxref=Genbank:WP_040215845.1;Name=WP_040215845.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpB;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225849.1;locus_tag=NLI98_RS17700;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_040215845.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3649697 3650272 . + . ID=gene-NLI98_RS17705;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=NLI98_RS17705;old_locus_tag=NLI98_17700 NZ_CP100601.1 Protein Homology CDS 3649697 3650272 . + 0 ID=cds-WP_032419213.1;Parent=gene-NLI98_RS17705;Dbxref=Genbank:WP_032419213.1;Name=WP_032419213.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225848.1;locus_tag=NLI98_RS17705;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_032419213.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3650273 3652960 . + . ID=gene-NLI98_RS17710;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=NLI98_RS17710;old_locus_tag=NLI98_17705 NZ_CP100601.1 Protein Homology CDS 3650273 3652960 . + 0 ID=cds-WP_087831721.1;Parent=gene-NLI98_RS17710;Dbxref=Genbank:WP_087831721.1;Name=WP_087831721.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225847.1;locus_tag=NLI98_RS17710;product=two-component system sensor histidine kinase KdpD;protein_id=WP_087831721.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3652957 3653634 . + . ID=gene-NLI98_RS17715;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=NLI98_RS17715;old_locus_tag=NLI98_17710 NZ_CP100601.1 Protein Homology CDS 3652957 3653634 . + 0 ID=cds-WP_002894776.1;Parent=gene-NLI98_RS17715;Dbxref=Genbank:WP_002894776.1;Name=WP_002894776.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225846.1;locus_tag=NLI98_RS17715;product=two-component system response regulator KdpE;protein_id=WP_002894776.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3653616 3654053 . - . ID=gene-NLI98_RS17720;Name=NLI98_RS17720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17720;old_locus_tag=NLI98_17715 NZ_CP100601.1 Protein Homology CDS 3653616 3654053 . - 0 ID=cds-WP_004179052.1;Parent=gene-NLI98_RS17720;Dbxref=Genbank:WP_004179052.1;Name=WP_004179052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225845.1;locus_tag=NLI98_RS17720;product=hypothetical protein;protein_id=WP_004179052.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3654108 3655748 . - . ID=gene-NLI98_RS17725;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=NLI98_RS17725;old_locus_tag=NLI98_17720 NZ_CP100601.1 Protein Homology CDS 3654108 3655748 . - 0 ID=cds-WP_002894773.1;Parent=gene-NLI98_RS17725;Dbxref=Genbank:WP_002894773.1;Name=WP_002894773.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225844.1;locus_tag=NLI98_RS17725;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_002894773.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3655781 3656329 . - . ID=gene-NLI98_RS17730;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=NLI98_RS17730;old_locus_tag=NLI98_17725 NZ_CP100601.1 Protein Homology CDS 3655781 3656329 . - 0 ID=cds-WP_002894771.1;Parent=gene-NLI98_RS17730;Dbxref=Genbank:WP_002894771.1;Name=WP_002894771.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225843.1;locus_tag=NLI98_RS17730;product=replication initiation negative regulator SeqA;protein_id=WP_002894771.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3656513 3657286 . + . ID=gene-NLI98_RS17735;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=NLI98_RS17735;old_locus_tag=NLI98_17730 NZ_CP100601.1 Protein Homology CDS 3656513 3657286 . + 0 ID=cds-WP_004152229.1;Parent=gene-NLI98_RS17735;Dbxref=Genbank:WP_004152229.1;Name=WP_004152229.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004223669.1;locus_tag=NLI98_RS17735;product=esterase;protein_id=WP_004152229.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3657420 3657713 . + . ID=gene-NLI98_RS17740;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=NLI98_RS17740;old_locus_tag=NLI98_17735 NZ_CP100601.1 Protein Homology CDS 3657420 3657713 . + 0 ID=cds-WP_002894767.1;Parent=gene-NLI98_RS17740;Dbxref=Genbank:WP_002894767.1;Name=WP_002894767.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225840.1;locus_tag=NLI98_RS17740;product=LexA regulated protein;protein_id=WP_002894767.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3657865 3658395 . + . ID=gene-NLI98_RS17745;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=NLI98_RS17745;old_locus_tag=NLI98_17740 NZ_CP100601.1 Protein Homology CDS 3657865 3658395 . + 0 ID=cds-WP_002894765.1;Parent=gene-NLI98_RS17745;Dbxref=Genbank:WP_002894765.1;Name=WP_002894765.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225839.1;locus_tag=NLI98_RS17745;product=flavodoxin FldA;protein_id=WP_002894765.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3658687 3659139 . + . ID=gene-NLI98_RS17750;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=NLI98_RS17750;old_locus_tag=NLI98_17745 NZ_CP100601.1 Protein Homology CDS 3658687 3659139 . + 0 ID=cds-WP_002894761.1;Parent=gene-NLI98_RS17750;Dbxref=Genbank:WP_002894761.1;Name=WP_002894761.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225838.1;locus_tag=NLI98_RS17750;product=ferric iron uptake transcriptional regulator;protein_id=WP_002894761.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 3659282 3659704 . + . ID=gene-NLI98_RS17755;Name=NLI98_RS17755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS17755;old_locus_tag=NLI98_17750;partial=true;pseudo=true;start_range=.,3659282 NZ_CP100601.1 Protein Homology CDS 3659282 3659704 . + 0 ID=cds-NLI98_RS17755;Parent=gene-NLI98_RS17755;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848845.1;locus_tag=NLI98_RS17755;partial=true;product=MFS transporter;pseudo=true;start_range=.,3659282;transl_table=11 NZ_CP100601.1 RefSeq gene 3659756 3660088 . - . ID=gene-NLI98_RS17760;Name=chiQ;gbkey=Gene;gene=chiQ;gene_biotype=protein_coding;locus_tag=NLI98_RS17760;old_locus_tag=NLI98_17755 NZ_CP100601.1 Protein Homology CDS 3659756 3660088 . - 0 ID=cds-WP_002894759.1;Parent=gene-NLI98_RS17760;Dbxref=Genbank:WP_002894759.1;Name=WP_002894759.1;gbkey=CDS;gene=chiQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225837.1;locus_tag=NLI98_RS17760;product=ChiQ/YbfN family lipoprotein;protein_id=WP_002894759.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3660136 3661539 . - . ID=gene-NLI98_RS17765;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=NLI98_RS17765;old_locus_tag=NLI98_17760 NZ_CP100601.1 Protein Homology CDS 3660136 3661539 . - 0 ID=cds-WP_004152230.1;Parent=gene-NLI98_RS17765;Dbxref=Genbank:WP_004152230.1;Name=WP_004152230.1;gbkey=CDS;gene=chiP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225836.1;locus_tag=NLI98_RS17765;product=chitoporin;protein_id=WP_004152230.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3661613 3661921 . + . ID=gene-NLI98_RS17770;Name=NLI98_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17770;old_locus_tag=NLI98_17765 NZ_CP100601.1 Protein Homology CDS 3661613 3661921 . + 0 ID=cds-WP_004142270.1;Parent=gene-NLI98_RS17770;Dbxref=Genbank:WP_004142270.1;Name=WP_004142270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225835.1;locus_tag=NLI98_RS17770;product=methionine synthase;protein_id=WP_004142270.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3661975 3663642 . - . ID=gene-NLI98_RS17775;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=NLI98_RS17775;old_locus_tag=NLI98_17770 NZ_CP100601.1 Protein Homology CDS 3661975 3663642 . - 0 ID=cds-WP_002894753.1;Parent=gene-NLI98_RS17775;Dbxref=Genbank:WP_002894753.1;Name=WP_002894753.1;Ontology_term=GO:0006425,GO:0004819,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=glutamine-tRNA ligase activity|0004819||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225834.1;locus_tag=NLI98_RS17775;product=glutamine--tRNA ligase;protein_id=WP_002894753.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3663821 3665776 . - . ID=gene-NLI98_RS17780;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=NLI98_RS17780;old_locus_tag=NLI98_17775 NZ_CP100601.1 Protein Homology CDS 3663821 3665776 . - 0 ID=cds-WP_004147599.1;Parent=gene-NLI98_RS17780;Dbxref=Genbank:WP_004147599.1;Name=WP_004147599.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225833.1;locus_tag=NLI98_RS17780;product=PTS N-acetyl glucosamine transporter subunit IIABC;protein_id=WP_004147599.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3666091 3666891 . + . ID=gene-NLI98_RS17785;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=NLI98_RS17785;old_locus_tag=NLI98_17780 NZ_CP100601.1 Protein Homology CDS 3666091 3666891 . + 0 ID=cds-WP_002894749.1;Parent=gene-NLI98_RS17785;Dbxref=Genbank:WP_002894749.1;Name=WP_002894749.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805656.1;locus_tag=NLI98_RS17785;product=glucosamine-6-phosphate deaminase;protein_id=WP_002894749.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3667005 3668153 . + . ID=gene-NLI98_RS17790;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=NLI98_RS17790;old_locus_tag=NLI98_17785 NZ_CP100601.1 Protein Homology CDS 3667005 3668153 . + 0 ID=cds-WP_002894747.1;Parent=gene-NLI98_RS17790;Dbxref=Genbank:WP_002894747.1;Name=WP_002894747.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225831.1;locus_tag=NLI98_RS17790;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_002894747.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3668162 3669382 . + . ID=gene-NLI98_RS17795;Name=NLI98_RS17795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17795;old_locus_tag=NLI98_17790 NZ_CP100601.1 Protein Homology CDS 3668162 3669382 . + 0 ID=cds-WP_029602342.1;Parent=gene-NLI98_RS17795;Dbxref=Genbank:WP_029602342.1;Name=WP_029602342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225830.1;locus_tag=NLI98_RS17795;product=ROK family transcriptional regulator;protein_id=WP_029602342.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3669499 3670251 . + . ID=gene-NLI98_RS17800;Name=NLI98_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17800;old_locus_tag=NLI98_17795 NZ_CP100601.1 Protein Homology CDS 3669499 3670251 . + 0 ID=cds-WP_002894738.1;Parent=gene-NLI98_RS17800;Dbxref=Genbank:WP_002894738.1;Name=WP_002894738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225829.1;locus_tag=NLI98_RS17800;product=HAD-IIA family hydrolase;protein_id=WP_002894738.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3670530 3672194 . + . ID=gene-NLI98_RS17805;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=NLI98_RS17805;old_locus_tag=NLI98_17800 NZ_CP100601.1 Protein Homology CDS 3670530 3672194 . + 0 ID=cds-WP_002894734.1;Parent=gene-NLI98_RS17805;Dbxref=Genbank:WP_002894734.1;Name=WP_002894734.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001724523.1;locus_tag=NLI98_RS17805;product=asparagine synthase B;protein_id=WP_002894734.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3672432 3672508 . + . ID=gene-NLI98_RS17810;Name=NLI98_RS17810;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS17810;old_locus_tag=NLI98_17805 NZ_CP100601.1 tRNAscan-SE tRNA 3672432 3672508 . + . ID=rna-NLI98_RS17810;Parent=gene-NLI98_RS17810;anticodon=(pos:3672466..3672468);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17810;product=tRNA-Met NZ_CP100601.1 tRNAscan-SE exon 3672432 3672508 . + . ID=exon-NLI98_RS17810-1;Parent=rna-NLI98_RS17810;anticodon=(pos:3672466..3672468);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17810;product=tRNA-Met NZ_CP100601.1 RefSeq gene 3672517 3672601 . + . ID=gene-NLI98_RS17815;Name=NLI98_RS17815;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS17815;old_locus_tag=NLI98_17810 NZ_CP100601.1 tRNAscan-SE tRNA 3672517 3672601 . + . ID=rna-NLI98_RS17815;Parent=gene-NLI98_RS17815;anticodon=(pos:3672551..3672553);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17815;product=tRNA-Leu NZ_CP100601.1 tRNAscan-SE exon 3672517 3672601 . + . ID=exon-NLI98_RS17815-1;Parent=rna-NLI98_RS17815;anticodon=(pos:3672551..3672553);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17815;product=tRNA-Leu NZ_CP100601.1 RefSeq gene 3672625 3672699 . + . ID=gene-NLI98_RS17820;Name=NLI98_RS17820;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS17820;old_locus_tag=NLI98_17815 NZ_CP100601.1 tRNAscan-SE tRNA 3672625 3672699 . + . ID=rna-NLI98_RS17820;Parent=gene-NLI98_RS17820;anticodon=(pos:3672657..3672659);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17820;product=tRNA-Gln NZ_CP100601.1 tRNAscan-SE exon 3672625 3672699 . + . ID=exon-NLI98_RS17820-1;Parent=rna-NLI98_RS17820;anticodon=(pos:3672657..3672659);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17820;product=tRNA-Gln NZ_CP100601.1 RefSeq gene 3672736 3672810 . + . ID=gene-NLI98_RS17825;Name=NLI98_RS17825;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS17825;old_locus_tag=NLI98_17820 NZ_CP100601.1 tRNAscan-SE tRNA 3672736 3672810 . + . ID=rna-NLI98_RS17825;Parent=gene-NLI98_RS17825;anticodon=(pos:3672768..3672770);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17825;product=tRNA-Gln NZ_CP100601.1 tRNAscan-SE exon 3672736 3672810 . + . ID=exon-NLI98_RS17825-1;Parent=rna-NLI98_RS17825;anticodon=(pos:3672768..3672770);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17825;product=tRNA-Gln NZ_CP100601.1 RefSeq gene 3672834 3672910 . + . ID=gene-NLI98_RS17830;Name=NLI98_RS17830;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS17830;old_locus_tag=NLI98_17825 NZ_CP100601.1 tRNAscan-SE tRNA 3672834 3672910 . + . ID=rna-NLI98_RS17830;Parent=gene-NLI98_RS17830;anticodon=(pos:3672868..3672870);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17830;product=tRNA-Met NZ_CP100601.1 tRNAscan-SE exon 3672834 3672910 . + . ID=exon-NLI98_RS17830-1;Parent=rna-NLI98_RS17830;anticodon=(pos:3672868..3672870);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17830;product=tRNA-Met NZ_CP100601.1 RefSeq gene 3672958 3673032 . + . ID=gene-NLI98_RS17835;Name=NLI98_RS17835;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS17835;old_locus_tag=NLI98_17830 NZ_CP100601.1 tRNAscan-SE tRNA 3672958 3673032 . + . ID=rna-NLI98_RS17835;Parent=gene-NLI98_RS17835;anticodon=(pos:3672990..3672992);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17835;product=tRNA-Gln NZ_CP100601.1 tRNAscan-SE exon 3672958 3673032 . + . ID=exon-NLI98_RS17835-1;Parent=rna-NLI98_RS17835;anticodon=(pos:3672990..3672992);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17835;product=tRNA-Gln NZ_CP100601.1 RefSeq gene 3673108 3673182 . + . ID=gene-NLI98_RS17840;Name=NLI98_RS17840;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS17840;old_locus_tag=NLI98_17835 NZ_CP100601.1 tRNAscan-SE tRNA 3673108 3673182 . + . ID=rna-NLI98_RS17840;Parent=gene-NLI98_RS17840;anticodon=(pos:3673140..3673142);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17840;product=tRNA-Gln NZ_CP100601.1 tRNAscan-SE exon 3673108 3673182 . + . ID=exon-NLI98_RS17840-1;Parent=rna-NLI98_RS17840;anticodon=(pos:3673140..3673142);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS17840;product=tRNA-Gln NZ_CP100601.1 RefSeq gene 3673302 3674477 . - . ID=gene-NLI98_RS17845;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=NLI98_RS17845;old_locus_tag=NLI98_17840 NZ_CP100601.1 Protein Homology CDS 3673302 3674477 . - 0 ID=cds-WP_049000943.1;Parent=gene-NLI98_RS17845;Dbxref=Genbank:WP_049000943.1;Name=WP_049000943.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225827.1;locus_tag=NLI98_RS17845;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_049000943.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3674657 3676081 . + . ID=gene-NLI98_RS17850;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=NLI98_RS17850;old_locus_tag=NLI98_17845 NZ_CP100601.1 Protein Homology CDS 3674657 3676081 . + 0 ID=cds-WP_049000939.1;Parent=gene-NLI98_RS17850;Dbxref=Genbank:WP_049000939.1;Name=WP_049000939.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225826.1;locus_tag=NLI98_RS17850;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_049000939.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3676235 3677281 . + . ID=gene-NLI98_RS17855;Name=NLI98_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17855;old_locus_tag=NLI98_17850 NZ_CP100601.1 Protein Homology CDS 3676235 3677281 . + 0 ID=cds-WP_004176871.1;Parent=gene-NLI98_RS17855;Dbxref=Genbank:WP_004176871.1;Name=WP_004176871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225825.1;locus_tag=NLI98_RS17855;product=PhoH family protein;protein_id=WP_004176871.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3677278 3677751 . + . ID=gene-NLI98_RS17860;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=NLI98_RS17860;old_locus_tag=NLI98_17855 NZ_CP100601.1 Protein Homology CDS 3677278 3677751 . + 0 ID=cds-WP_002894722.1;Parent=gene-NLI98_RS17860;Dbxref=Genbank:WP_002894722.1;Name=WP_002894722.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225824.1;locus_tag=NLI98_RS17860;product=rRNA maturation RNase YbeY;protein_id=WP_002894722.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3677899 3678777 . + . ID=gene-NLI98_RS17865;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=NLI98_RS17865;old_locus_tag=NLI98_17860 NZ_CP100601.1 Protein Homology CDS 3677899 3678777 . + 0 ID=cds-WP_004197606.1;Parent=gene-NLI98_RS17865;Dbxref=Genbank:WP_004197606.1;Name=WP_004197606.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459659.1;locus_tag=NLI98_RS17865;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_004197606.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3678903 3680441 . + . ID=gene-NLI98_RS17870;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=NLI98_RS17870;old_locus_tag=NLI98_17865 NZ_CP100601.1 Protein Homology CDS 3678903 3680441 . + 0 ID=cds-WP_004142312.1;Parent=gene-NLI98_RS17870;Dbxref=Genbank:WP_004142312.1;Name=WP_004142312.1;Ontology_term=GO:0006497,GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=protein lipidation|0006497||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225822.1;locus_tag=NLI98_RS17870;product=apolipoprotein N-acyltransferase;protein_id=WP_004142312.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3680796 3681707 . + . ID=gene-NLI98_RS17875;Name=NLI98_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17875;old_locus_tag=NLI98_17870 NZ_CP100601.1 Protein Homology CDS 3680796 3681707 . + 0 ID=cds-WP_002894712.1;Parent=gene-NLI98_RS17875;Dbxref=Genbank:WP_002894712.1;Name=WP_002894712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225821.1;locus_tag=NLI98_RS17875;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_002894712.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3681872 3682612 . + . ID=gene-NLI98_RS17880;Name=NLI98_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17880;old_locus_tag=NLI98_17875 NZ_CP100601.1 Protein Homology CDS 3681872 3682612 . + 0 ID=cds-WP_002894709.1;Parent=gene-NLI98_RS17880;Dbxref=Genbank:WP_002894709.1;Name=WP_002894709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225820.1;locus_tag=NLI98_RS17880;product=amino acid ABC transporter permease;protein_id=WP_002894709.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3682612 3683286 . + . ID=gene-NLI98_RS17885;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=NLI98_RS17885;old_locus_tag=NLI98_17880 NZ_CP100601.1 Protein Homology CDS 3682612 3683286 . + 0 ID=cds-WP_002894707.1;Parent=gene-NLI98_RS17885;Dbxref=Genbank:WP_002894707.1;Name=WP_002894707.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225819.1;locus_tag=NLI98_RS17885;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_002894707.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3683286 3684011 . + . ID=gene-NLI98_RS17890;Name=NLI98_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17890;old_locus_tag=NLI98_17885 NZ_CP100601.1 Protein Homology CDS 3683286 3684011 . + 0 ID=cds-WP_002894706.1;Parent=gene-NLI98_RS17890;Dbxref=Genbank:WP_002894706.1;Name=WP_002894706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=NLI98_RS17890;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_002894706.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3684385 3686055 . + . ID=gene-NLI98_RS17895;Name=NLI98_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17895;old_locus_tag=NLI98_17890 NZ_CP100601.1 Protein Homology CDS 3684385 3686055 . + 0 ID=cds-WP_088498575.1;Parent=gene-NLI98_RS17895;Dbxref=Genbank:WP_088498575.1;Name=WP_088498575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225816.1;locus_tag=NLI98_RS17895;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_088498575.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3686120 3687913 . + . ID=gene-NLI98_RS17900;Name=NLI98_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17900;old_locus_tag=NLI98_17895 NZ_CP100601.1 Protein Homology CDS 3686120 3687913 . + 0 ID=cds-WP_064278469.1;Parent=gene-NLI98_RS17900;Dbxref=Genbank:WP_064278469.1;Name=WP_064278469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225815.1;locus_tag=NLI98_RS17900;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=WP_064278469.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3687959 3688441 . - . ID=gene-NLI98_RS17905;Name=NLI98_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17905;old_locus_tag=NLI98_17900 NZ_CP100601.1 Protein Homology CDS 3687959 3688441 . - 0 ID=cds-WP_002894699.1;Parent=gene-NLI98_RS17905;Dbxref=Genbank:WP_002894699.1;Name=WP_002894699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308708.1;locus_tag=NLI98_RS17905;product=zinc ribbon-containing protein;protein_id=WP_002894699.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3688668 3691250 . + . ID=gene-NLI98_RS17910;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=NLI98_RS17910;old_locus_tag=NLI98_17905 NZ_CP100601.1 Protein Homology CDS 3688668 3691250 . + 0 ID=cds-WP_004179029.1;Parent=gene-NLI98_RS17910;Dbxref=Genbank:WP_004179029.1;Name=WP_004179029.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=NLI98_RS17910;product=leucine--tRNA ligase;protein_id=WP_004179029.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3691265 3691855 . + . ID=gene-NLI98_RS17915;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=NLI98_RS17915;old_locus_tag=NLI98_17910 NZ_CP100601.1 Protein Homology CDS 3691265 3691855 . + 0 ID=cds-WP_002894693.1;Parent=gene-NLI98_RS17915;Dbxref=Genbank:WP_002894693.1;Name=WP_002894693.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002894693.1;locus_tag=NLI98_RS17915;product=LPS assembly lipoprotein LptE;protein_id=WP_002894693.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3691855 3692886 . + . ID=gene-NLI98_RS17920;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=NLI98_RS17920;old_locus_tag=NLI98_17915 NZ_CP100601.1 Protein Homology CDS 3691855 3692886 . + 0 ID=cds-WP_002894692.1;Parent=gene-NLI98_RS17920;Dbxref=Genbank:WP_002894692.1;Name=WP_002894692.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415173.1;locus_tag=NLI98_RS17920;product=DNA polymerase III subunit delta;protein_id=WP_002894692.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3692879 3693529 . + . ID=gene-NLI98_RS17925;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=NLI98_RS17925;old_locus_tag=NLI98_17920 NZ_CP100601.1 Protein Homology CDS 3692879 3693529 . + 0 ID=cds-WP_004176879.1;Parent=gene-NLI98_RS17925;Dbxref=Genbank:WP_004176879.1;Name=WP_004176879.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225810.1;locus_tag=NLI98_RS17925;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_004176879.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3693602 3694231 . + . ID=gene-NLI98_RS17930;Name=NLI98_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17930;old_locus_tag=NLI98_17925 NZ_CP100601.1 Protein Homology CDS 3693602 3694231 . + 0 ID=cds-WP_012737645.1;Parent=gene-NLI98_RS17930;Dbxref=Genbank:WP_012737645.1;Name=WP_012737645.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225809.1;locus_tag=NLI98_RS17930;product=adenosylcobalamin/alpha-ribazole phosphatase;protein_id=WP_012737645.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3694454 3694771 . + . ID=gene-NLI98_RS17935;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=NLI98_RS17935;old_locus_tag=NLI98_17930 NZ_CP100601.1 Protein Homology CDS 3694454 3694771 . + 0 ID=cds-WP_002894623.1;Parent=gene-NLI98_RS17935;Dbxref=Genbank:WP_002894623.1;Name=WP_002894623.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373852.1;locus_tag=NLI98_RS17935;product=ribosome silencing factor;protein_id=WP_002894623.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3694775 3695242 . + . ID=gene-NLI98_RS17940;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=NLI98_RS17940;old_locus_tag=NLI98_17935 NZ_CP100601.1 Protein Homology CDS 3694775 3695242 . + 0 ID=cds-WP_064188213.1;Parent=gene-NLI98_RS17940;Dbxref=Genbank:WP_064188213.1;Name=WP_064188213.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=NLI98_RS17940;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_064188213.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3695270 3697171 . + . ID=gene-NLI98_RS17945;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=NLI98_RS17945;old_locus_tag=NLI98_17940 NZ_CP100601.1 Protein Homology CDS 3695270 3697171 . + 0 ID=cds-WP_002894617.1;Parent=gene-NLI98_RS17945;Dbxref=Genbank:WP_002894617.1;Name=WP_002894617.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225806.1;locus_tag=NLI98_RS17945;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_002894617.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3697171 3698283 . + . ID=gene-NLI98_RS17950;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=NLI98_RS17950;old_locus_tag=NLI98_17945 NZ_CP100601.1 Protein Homology CDS 3697171 3698283 . + 0 ID=cds-WP_002894613.1;Parent=gene-NLI98_RS17950;Dbxref=Genbank:WP_002894613.1;Name=WP_002894613.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885876.1;locus_tag=NLI98_RS17950;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_002894613.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3698295 3699443 . + . ID=gene-NLI98_RS17955;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=NLI98_RS17955;old_locus_tag=NLI98_17950 NZ_CP100601.1 Protein Homology CDS 3698295 3699443 . + 0 ID=cds-WP_088498576.1;Parent=gene-NLI98_RS17955;Dbxref=Genbank:WP_088498576.1;Name=WP_088498576.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225804.1;locus_tag=NLI98_RS17955;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_088498576.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3699582 3700781 . + . ID=gene-NLI98_RS17960;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=NLI98_RS17960;old_locus_tag=NLI98_17955 NZ_CP100601.1 Protein Homology CDS 3699582 3700781 . + 0 ID=cds-WP_002894539.1;Parent=gene-NLI98_RS17960;Dbxref=Genbank:WP_002894539.1;Name=WP_002894539.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415165.1;locus_tag=NLI98_RS17960;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_002894539.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3700894 3701157 . + . ID=gene-NLI98_RS17965;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=NLI98_RS17965;old_locus_tag=NLI98_17960 NZ_CP100601.1 Protein Homology CDS 3700894 3701157 . + 0 ID=cds-WP_002894474.1;Parent=gene-NLI98_RS17965;Dbxref=Genbank:WP_002894474.1;Name=WP_002894474.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225802.1;locus_tag=NLI98_RS17965;product=DUF493 family protein YbeD;protein_id=WP_002894474.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3701262 3701906 . + . ID=gene-NLI98_RS17970;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=NLI98_RS17970;old_locus_tag=NLI98_17965 NZ_CP100601.1 Protein Homology CDS 3701262 3701906 . + 0 ID=cds-WP_002894472.1;Parent=gene-NLI98_RS17970;Dbxref=Genbank:WP_002894472.1;Name=WP_002894472.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225801.1;locus_tag=NLI98_RS17970;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_002894472.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3702037 3702996 . + . ID=gene-NLI98_RS17975;Name=NLI98_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17975;old_locus_tag=NLI98_17970 NZ_CP100601.1 Protein Homology CDS 3702037 3702996 . + 0 ID=cds-WP_004220154.1;Parent=gene-NLI98_RS17975;Dbxref=Genbank:WP_004220154.1;Name=WP_004220154.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968702.1;locus_tag=NLI98_RS17975;product=YbeF family transcriptional regulator;protein_id=WP_004220154.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3703177 3704142 . + . ID=gene-NLI98_RS17980;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=NLI98_RS17980;old_locus_tag=NLI98_17975 NZ_CP100601.1 Protein Homology CDS 3703177 3704142 . + 0 ID=cds-WP_002894467.1;Parent=gene-NLI98_RS17980;Dbxref=Genbank:WP_002894467.1;Name=WP_002894467.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=NLI98_RS17980;product=lipoyl synthase;protein_id=WP_002894467.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3704333 3704539 . - . ID=gene-NLI98_RS17985;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=NLI98_RS17985;old_locus_tag=NLI98_17980 NZ_CP100601.1 Protein Homology CDS 3704333 3704539 . - 0 ID=cds-WP_002894464.1;Parent=gene-NLI98_RS17985;Dbxref=Genbank:WP_002894464.1;Name=WP_002894464.1;gbkey=CDS;gene=tatE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225798.1;locus_tag=NLI98_RS17985;product=twin-arginine translocase subunit TatE;protein_id=WP_002894464.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3704782 3705570 . - . ID=gene-NLI98_RS17990;Name=NLI98_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS17990;old_locus_tag=NLI98_17985 NZ_CP100601.1 Protein Homology CDS 3704782 3705570 . - 0 ID=cds-WP_020803596.1;Parent=gene-NLI98_RS17990;Dbxref=Genbank:WP_020803596.1;Name=WP_020803596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225797.1;locus_tag=NLI98_RS17990;product=deaminated glutathione amidase;protein_id=WP_020803596.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3705660 3706043 . + . ID=gene-NLI98_RS17995;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=NLI98_RS17995;old_locus_tag=NLI98_17990 NZ_CP100601.1 Protein Homology CDS 3705660 3706043 . + 0 ID=cds-WP_002894459.1;Parent=gene-NLI98_RS17995;Dbxref=Genbank:WP_002894459.1;Name=WP_002894459.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225796.1;locus_tag=NLI98_RS17995;product=fluoride efflux transporter CrcB;protein_id=WP_002894459.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3706111 3706320 . - . ID=gene-NLI98_RS18000;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=NLI98_RS18000;old_locus_tag=NLI98_17995 NZ_CP100601.1 Protein Homology CDS 3706111 3706320 . - 0 ID=cds-WP_002439184.1;Parent=gene-NLI98_RS18000;Dbxref=Genbank:WP_002439184.1;Name=WP_002439184.1;gbkey=CDS;gene=cspE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225795.1;locus_tag=NLI98_RS18000;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_002439184.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3706515 3707033 . - . ID=gene-NLI98_RS18005;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=NLI98_RS18005;old_locus_tag=NLI98_18000 NZ_CP100601.1 Protein Homology CDS 3706515 3707033 . - 0 ID=cds-WP_004183399.1;Parent=gene-NLI98_RS18005;Dbxref=Genbank:WP_004183399.1;Name=WP_004183399.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004848766.1;locus_tag=NLI98_RS18005;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_004183399.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3707372 3708745 . + . ID=gene-NLI98_RS18010;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=NLI98_RS18010;old_locus_tag=NLI98_18005 NZ_CP100601.1 Protein Homology CDS 3707372 3708745 . + 0 ID=cds-WP_004142371.1;Parent=gene-NLI98_RS18010;Dbxref=Genbank:WP_004142371.1;Name=WP_004142371.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225793.1;locus_tag=NLI98_RS18010;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_004142371.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3708838 3709635 . + . ID=gene-NLI98_RS18015;Name=rna;gbkey=Gene;gene=rna;gene_biotype=protein_coding;locus_tag=NLI98_RS18015;old_locus_tag=NLI98_18010 NZ_CP100601.1 Protein Homology CDS 3708838 3709635 . + 0 ID=cds-WP_004176884.1;Parent=gene-NLI98_RS18015;Dbxref=Genbank:WP_004176884.1;Name=WP_004176884.1;gbkey=CDS;gene=rna;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225792.1;locus_tag=NLI98_RS18015;product=ribonuclease I;protein_id=WP_004176884.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3709814 3710224 . + . ID=gene-NLI98_RS18020;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=NLI98_RS18020;old_locus_tag=NLI98_18015 NZ_CP100601.1 Protein Homology CDS 3709814 3710224 . + 0 ID=cds-WP_002894404.1;Parent=gene-NLI98_RS18020;Dbxref=Genbank:WP_002894404.1;Name=WP_002894404.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225791.1;locus_tag=NLI98_RS18020;product=nucleoside diphosphate kinase regulator;protein_id=WP_002894404.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3710411 3710839 . + . ID=gene-NLI98_RS18025;Name=uspG;gbkey=Gene;gene=uspG;gene_biotype=protein_coding;locus_tag=NLI98_RS18025;old_locus_tag=NLI98_18020 NZ_CP100601.1 Protein Homology CDS 3710411 3710839 . + 0 ID=cds-WP_088498577.1;Parent=gene-NLI98_RS18025;Dbxref=Genbank:WP_088498577.1;Name=WP_088498577.1;gbkey=CDS;gene=uspG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225790.1;locus_tag=NLI98_RS18025;product=universal stress protein UspG;protein_id=WP_088498577.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3710916 3712481 . - . ID=gene-NLI98_RS18030;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=NLI98_RS18030;old_locus_tag=NLI98_18025 NZ_CP100601.1 Protein Homology CDS 3710916 3712481 . - 0 ID=cds-WP_004893443.1;Parent=gene-NLI98_RS18030;Dbxref=Genbank:WP_004893443.1;Name=WP_004893443.1;Ontology_term=GO:0006805,GO:0009398,GO:0016668;gbkey=CDS;gene=ahpF;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA;go_process=xenobiotic metabolic process|0006805||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455864.1;locus_tag=NLI98_RS18030;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_004893443.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3712669 3713232 . - . ID=gene-NLI98_RS18035;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=NLI98_RS18035;old_locus_tag=NLI98_18030 NZ_CP100601.1 Protein Homology CDS 3712669 3713232 . - 0 ID=cds-WP_002894394.1;Parent=gene-NLI98_RS18035;Dbxref=Genbank:WP_002894394.1;Name=WP_002894394.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=NLI98_RS18035;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_002894394.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3713644 3714393 . + . ID=gene-NLI98_RS18040;Name=dsbG;gbkey=Gene;gene=dsbG;gene_biotype=protein_coding;locus_tag=NLI98_RS18040;old_locus_tag=NLI98_18035 NZ_CP100601.1 Protein Homology CDS 3713644 3714393 . + 0 ID=cds-WP_002894375.1;Parent=gene-NLI98_RS18040;Dbxref=Genbank:WP_002894375.1;Name=WP_002894375.1;gbkey=CDS;gene=dsbG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225787.1;locus_tag=NLI98_RS18040;product=thiol:disulfide interchange protein DsbG;protein_id=WP_002894375.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3714574 3715506 . + . ID=gene-NLI98_RS18045;Name=NLI98_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18045;old_locus_tag=NLI98_18040 NZ_CP100601.1 Protein Homology CDS 3714574 3715506 . + 0 ID=cds-WP_002894372.1;Parent=gene-NLI98_RS18045;Dbxref=Genbank:WP_002894372.1;Name=WP_002894372.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225786.1;locus_tag=NLI98_RS18045;product=LysR family transcriptional regulator;protein_id=WP_002894372.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3715617 3716840 . + . ID=gene-NLI98_RS18050;Name=NLI98_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18050;old_locus_tag=NLI98_18045 NZ_CP100601.1 Protein Homology CDS 3715617 3716840 . + 0 ID=cds-WP_002894369.1;Parent=gene-NLI98_RS18050;Dbxref=Genbank:WP_002894369.1;Name=WP_002894369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225785.1;locus_tag=NLI98_RS18050;product=DUF3440 domain-containing protein;protein_id=WP_002894369.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3716825 3717451 . + . ID=gene-NLI98_RS18055;Name=NLI98_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18055;old_locus_tag=NLI98_18050 NZ_CP100601.1 Protein Homology CDS 3716825 3717451 . + 0 ID=cds-WP_004151651.1;Parent=gene-NLI98_RS18055;Dbxref=Genbank:WP_004151651.1;Name=WP_004151651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225784.1;locus_tag=NLI98_RS18055;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_004151651.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3717452 3718597 . - . ID=gene-NLI98_RS18060;Name=NLI98_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18060;old_locus_tag=NLI98_18055 NZ_CP100601.1 Protein Homology CDS 3717452 3718597 . - 0 ID=cds-WP_072158507.1;Parent=gene-NLI98_RS18060;Dbxref=Genbank:WP_072158507.1;Name=WP_072158507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225783.1;locus_tag=NLI98_RS18060;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_072158507.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3718739 3719428 . + . ID=gene-NLI98_RS18065;Name=mtnC;gbkey=Gene;gene=mtnC;gene_biotype=protein_coding;locus_tag=NLI98_RS18065;old_locus_tag=NLI98_18060 NZ_CP100601.1 Protein Homology CDS 3718739 3719428 . + 0 ID=cds-WP_004142397.1;Parent=gene-NLI98_RS18065;Dbxref=Genbank:WP_004142397.1;Name=WP_004142397.1;Ontology_term=GO:0019509,GO:0016791,GO:0016862;gbkey=CDS;gene=mtnC;go_function=phosphatase activity|0016791||IEA,intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225782.1;locus_tag=NLI98_RS18065;product=acireductone synthase;protein_id=WP_004142397.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3719425 3719967 . + . ID=gene-NLI98_RS18070;Name=NLI98_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18070;old_locus_tag=NLI98_18065 NZ_CP100601.1 Protein Homology CDS 3719425 3719967 . + 0 ID=cds-WP_002894357.1;Parent=gene-NLI98_RS18070;Dbxref=Genbank:WP_002894357.1;Name=WP_002894357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225781.1;locus_tag=NLI98_RS18070;product=1%2C2-dihydroxy-3-keto-5-methylthiopentene dioxygenase;protein_id=WP_002894357.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3720075 3722384 . - . ID=gene-NLI98_RS18075;Name=NLI98_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18075;old_locus_tag=NLI98_18070 NZ_CP100601.1 Protein Homology CDS 3720075 3722384 . - 0 ID=cds-WP_004179014.1;Parent=gene-NLI98_RS18075;Dbxref=Genbank:WP_004179014.1;Name=WP_004179014.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225780.1;locus_tag=NLI98_RS18075;product=molybdopterin-dependent oxidoreductase;protein_id=WP_004179014.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3722792 3723772 . + . ID=gene-NLI98_RS18080;Name=NLI98_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18080;old_locus_tag=NLI98_18075 NZ_CP100601.1 Protein Homology CDS 3722792 3723772 . + 0 ID=cds-WP_002894353.1;Parent=gene-NLI98_RS18080;Dbxref=Genbank:WP_002894353.1;Name=WP_002894353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225779.1;locus_tag=NLI98_RS18080;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002894353.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3723817 3725319 . + . ID=gene-NLI98_RS18085;Name=NLI98_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18085;old_locus_tag=NLI98_18080 NZ_CP100601.1 Protein Homology CDS 3723817 3725319 . + 0 ID=cds-WP_023158362.1;Parent=gene-NLI98_RS18085;Dbxref=Genbank:WP_023158362.1;Name=WP_023158362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225778.1;locus_tag=NLI98_RS18085;product=sugar ABC transporter ATP-binding protein;protein_id=WP_023158362.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3725316 3726305 . + . ID=gene-NLI98_RS18090;Name=NLI98_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18090;old_locus_tag=NLI98_18085 NZ_CP100601.1 Protein Homology CDS 3725316 3726305 . + 0 ID=cds-WP_004147555.1;Parent=gene-NLI98_RS18090;Dbxref=Genbank:WP_004147555.1;Name=WP_004147555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009485204.1;locus_tag=NLI98_RS18090;product=ABC transporter permease;protein_id=WP_004147555.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3726302 3727306 . + . ID=gene-NLI98_RS18095;Name=NLI98_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18095;old_locus_tag=NLI98_18090 NZ_CP100601.1 Protein Homology CDS 3726302 3727306 . + 0 ID=cds-WP_004147554.1;Parent=gene-NLI98_RS18095;Dbxref=Genbank:WP_004147554.1;Name=WP_004147554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225776.1;locus_tag=NLI98_RS18095;product=ABC transporter permease;protein_id=WP_004147554.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3727318 3728259 . + . ID=gene-NLI98_RS18100;Name=NLI98_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18100;old_locus_tag=NLI98_18095 NZ_CP100601.1 Protein Homology CDS 3727318 3728259 . + 0 ID=cds-WP_004147553.1;Parent=gene-NLI98_RS18100;Dbxref=Genbank:WP_004147553.1;Name=WP_004147553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225775.1;locus_tag=NLI98_RS18100;product=sugar kinase;protein_id=WP_004147553.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3728302 3729330 . - . ID=gene-NLI98_RS18105;Name=NLI98_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18105;old_locus_tag=NLI98_18100 NZ_CP100601.1 Protein Homology CDS 3728302 3729330 . - 0 ID=cds-WP_088498578.1;Parent=gene-NLI98_RS18105;Dbxref=Genbank:WP_088498578.1;Name=WP_088498578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225774.1;locus_tag=NLI98_RS18105;product=2-hydroxyacid dehydrogenase;protein_id=WP_088498578.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3729327 3730823 . - . ID=gene-NLI98_RS18110;Name=NLI98_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18110;old_locus_tag=NLI98_18105 NZ_CP100601.1 Protein Homology CDS 3729327 3730823 . - 0 ID=cds-WP_094645056.1;Parent=gene-NLI98_RS18110;Dbxref=Genbank:WP_094645056.1;Name=WP_094645056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225773.1;locus_tag=NLI98_RS18110;product=carbohydrate kinase;protein_id=WP_094645056.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3730836 3731444 . - . ID=gene-NLI98_RS18115;Name=NLI98_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18115;old_locus_tag=NLI98_18110 NZ_CP100601.1 Protein Homology CDS 3730836 3731444 . - 0 ID=cds-WP_002894164.1;Parent=gene-NLI98_RS18115;Dbxref=Genbank:WP_002894164.1;Name=WP_002894164.1;Ontology_term=GO:0019509,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225772.1;locus_tag=NLI98_RS18115;product=methylthioribulose 1-phosphate dehydratase;protein_id=WP_002894164.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3731896 3733158 . + . ID=gene-NLI98_RS18120;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=NLI98_RS18120;old_locus_tag=NLI98_18115 NZ_CP100601.1 Protein Homology CDS 3731896 3733158 . + 0 ID=cds-WP_009485210.1;Parent=gene-NLI98_RS18120;Dbxref=Genbank:WP_009485210.1;Name=WP_009485210.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225771.1;locus_tag=NLI98_RS18120;product=cytosine permease;protein_id=WP_009485210.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3733155 3734390 . + . ID=gene-NLI98_RS18125;Name=NLI98_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18125;old_locus_tag=NLI98_18120 NZ_CP100601.1 Protein Homology CDS 3733155 3734390 . + 0 ID=cds-WP_004197605.1;Parent=gene-NLI98_RS18125;Dbxref=Genbank:WP_004197605.1;Name=WP_004197605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225770.1;locus_tag=NLI98_RS18125;product=PucR family transcriptional regulator ligand-binding domain-containing protein;protein_id=WP_004197605.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3734387 3735625 . + . ID=gene-NLI98_RS18130;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=NLI98_RS18130;old_locus_tag=NLI98_18125 NZ_CP100601.1 Protein Homology CDS 3734387 3735625 . + 0 ID=cds-WP_004178999.1;Parent=gene-NLI98_RS18130;Dbxref=Genbank:WP_004178999.1;Name=WP_004178999.1;Ontology_term=GO:0016810;gbkey=CDS;gene=codA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019705372.1;locus_tag=NLI98_RS18130;product=cytosine deaminase;protein_id=WP_004178999.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3735771 3736721 . + . ID=gene-NLI98_RS18135;Name=NLI98_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18135;old_locus_tag=NLI98_18130 NZ_CP100601.1 Protein Homology CDS 3735771 3736721 . + 0 ID=cds-WP_072157843.1;Parent=gene-NLI98_RS18135;Dbxref=Genbank:WP_072157843.1;Name=WP_072157843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225768.1;locus_tag=NLI98_RS18135;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_072157843.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3736843 3737652 . + . ID=gene-NLI98_RS18140;Name=NLI98_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18140;old_locus_tag=NLI98_18135 NZ_CP100601.1 Protein Homology CDS 3736843 3737652 . + 0 ID=cds-WP_004178995.1;Parent=gene-NLI98_RS18140;Dbxref=Genbank:WP_004178995.1;Name=WP_004178995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225767.1;locus_tag=NLI98_RS18140;product=inositol monophosphatase;protein_id=WP_004178995.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3737763 3739121 . + . ID=gene-NLI98_RS18145;Name=NLI98_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18145;old_locus_tag=NLI98_18140 NZ_CP100601.1 Protein Homology CDS 3737763 3739121 . + 0 ID=cds-WP_002894151.1;Parent=gene-NLI98_RS18145;Dbxref=Genbank:WP_002894151.1;Name=WP_002894151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225766.1;locus_tag=NLI98_RS18145;product=MFS transporter;protein_id=WP_002894151.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3739147 3740415 . + . ID=gene-NLI98_RS18150;Name=NLI98_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18150;old_locus_tag=NLI98_18145 NZ_CP100601.1 Protein Homology CDS 3739147 3740415 . + 0 ID=cds-WP_004176900.1;Parent=gene-NLI98_RS18150;Dbxref=Genbank:WP_004176900.1;Name=WP_004176900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225765.1;locus_tag=NLI98_RS18150;product=histidine phosphatase family protein;protein_id=WP_004176900.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3740476 3741504 . - . ID=gene-NLI98_RS18155;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=NLI98_RS18155;old_locus_tag=NLI98_18150 NZ_CP100601.1 Protein Homology CDS 3740476 3741504 . - 0 ID=cds-WP_088498235.1;Parent=gene-NLI98_RS18155;Dbxref=Genbank:WP_088498235.1;Name=WP_088498235.1;Ontology_term=GO:0019509,GO:0046523;gbkey=CDS;gene=mtnA;go_function=S-methyl-5-thioribose-1-phosphate isomerase activity|0046523||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225764.1;locus_tag=NLI98_RS18155;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=WP_088498235.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3741606 3742805 . + . ID=gene-NLI98_RS18160;Name=mtnK;gbkey=Gene;gene=mtnK;gene_biotype=protein_coding;locus_tag=NLI98_RS18160;old_locus_tag=NLI98_18155 NZ_CP100601.1 Protein Homology CDS 3741606 3742805 . + 0 ID=cds-WP_004151657.1;Parent=gene-NLI98_RS18160;Dbxref=Genbank:WP_004151657.1;Name=WP_004151657.1;Ontology_term=GO:0019509,GO:0046522;gbkey=CDS;gene=mtnK;go_function=S-methyl-5-thioribose kinase activity|0046522||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225763.1;locus_tag=NLI98_RS18160;product=S-methyl-5-thioribose kinase;protein_id=WP_004151657.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3743019 3744260 . - . ID=gene-NLI98_RS18165;Name=NLI98_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18165;old_locus_tag=NLI98_18160 NZ_CP100601.1 Protein Homology CDS 3743019 3744260 . - 0 ID=cds-WP_088498236.1;Parent=gene-NLI98_RS18165;Dbxref=Genbank:WP_088498236.1;Name=WP_088498236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225760.1;locus_tag=NLI98_RS18165;product=LVIVD repeat-containing protein;protein_id=WP_088498236.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3744362 3745426 . - . ID=gene-NLI98_RS18170;Name=NLI98_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18170;old_locus_tag=NLI98_18165 NZ_CP100601.1 Protein Homology CDS 3744362 3745426 . - 0 ID=cds-WP_002894036.1;Parent=gene-NLI98_RS18170;Dbxref=Genbank:WP_002894036.1;Name=WP_002894036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225759.1;locus_tag=NLI98_RS18170;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002894036.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3745447 3746445 . - . ID=gene-NLI98_RS18175;Name=NLI98_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18175;old_locus_tag=NLI98_18170 NZ_CP100601.1 Protein Homology CDS 3745447 3746445 . - 0 ID=cds-WP_004176906.1;Parent=gene-NLI98_RS18175;Dbxref=Genbank:WP_004176906.1;Name=WP_004176906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225758.1;locus_tag=NLI98_RS18175;product=ABC transporter permease;protein_id=WP_004176906.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3746442 3747944 . - . ID=gene-NLI98_RS18180;Name=NLI98_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18180;old_locus_tag=NLI98_18175 NZ_CP100601.1 Protein Homology CDS 3746442 3747944 . - 0 ID=cds-WP_023316315.1;Parent=gene-NLI98_RS18180;Dbxref=Genbank:WP_023316315.1;Name=WP_023316315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225757.1;locus_tag=NLI98_RS18180;product=sugar ABC transporter ATP-binding protein;protein_id=WP_023316315.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3748108 3749196 . + . ID=gene-NLI98_RS18185;Name=NLI98_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18185;old_locus_tag=NLI98_18180 NZ_CP100601.1 Protein Homology CDS 3748108 3749196 . + 0 ID=cds-WP_040181818.1;Parent=gene-NLI98_RS18185;Dbxref=Genbank:WP_040181818.1;Name=WP_040181818.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225756.1;locus_tag=NLI98_RS18185;product=oxidoreductase;protein_id=WP_040181818.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3749254 3749997 . + . ID=gene-NLI98_RS18190;Name=NLI98_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18190;old_locus_tag=NLI98_18185 NZ_CP100601.1 Protein Homology CDS 3749254 3749997 . + 0 ID=cds-WP_002893908.1;Parent=gene-NLI98_RS18190;Dbxref=Genbank:WP_002893908.1;Name=WP_002893908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225755.1;locus_tag=NLI98_RS18190;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_002893908.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3750181 3750483 . + . ID=gene-NLI98_RS18195;Name=NLI98_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18195;old_locus_tag=NLI98_18190 NZ_CP100601.1 Protein Homology CDS 3750181 3750483 . + 0 ID=cds-WP_004147534.1;Parent=gene-NLI98_RS18195;Dbxref=Genbank:WP_004147534.1;Name=WP_004147534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225754.1;locus_tag=NLI98_RS18195;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_004147534.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3750458 3750862 . + . ID=gene-NLI98_RS18200;Name=NLI98_RS18200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18200;old_locus_tag=NLI98_18195 NZ_CP100601.1 Protein Homology CDS 3750458 3750862 . + 0 ID=cds-WP_004176911.1;Parent=gene-NLI98_RS18200;Dbxref=Genbank:WP_004176911.1;Name=WP_004176911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225753.1;locus_tag=NLI98_RS18200;product=helix-turn-helix domain-containing protein;protein_id=WP_004176911.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3750859 3751056 . - . ID=gene-NLI98_RS18205;Name=NLI98_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18205;old_locus_tag=NLI98_18200 NZ_CP100601.1 Protein Homology CDS 3750859 3751056 . - 0 ID=cds-WP_002893903.1;Parent=gene-NLI98_RS18205;Dbxref=Genbank:WP_002893903.1;Name=WP_002893903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904950.1;locus_tag=NLI98_RS18205;product=YbdD/YjiX family protein;protein_id=WP_002893903.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3751161 3753266 . - . ID=gene-NLI98_RS18210;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=NLI98_RS18210;old_locus_tag=NLI98_18205 NZ_CP100601.1 Protein Homology CDS 3751161 3753266 . - 0 ID=cds-WP_002893896.1;Parent=gene-NLI98_RS18210;Dbxref=Genbank:WP_002893896.1;Name=WP_002893896.1;Ontology_term=GO:0009267;gbkey=CDS;gene=cstA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225751.1;locus_tag=NLI98_RS18210;product=pyruvate/proton symporter CstA;protein_id=WP_002893896.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3753622 3754035 . - . ID=gene-NLI98_RS18215;Name=entH;gbkey=Gene;gene=entH;gene_biotype=protein_coding;locus_tag=NLI98_RS18215;old_locus_tag=NLI98_18210 NZ_CP100601.1 Protein Homology CDS 3753622 3754035 . - 0 ID=cds-WP_020801570.1;Parent=gene-NLI98_RS18215;Dbxref=Genbank:WP_020801570.1;Name=WP_020801570.1;gbkey=CDS;gene=entH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225750.1;locus_tag=NLI98_RS18215;product=proofreading thioesterase EntH;protein_id=WP_020801570.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3754036 3754782 . - . ID=gene-NLI98_RS18220;Name=entA;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=NLI98_RS18220;old_locus_tag=NLI98_18215 NZ_CP100601.1 Protein Homology CDS 3754036 3754782 . - 0 ID=cds-WP_024622880.1;Parent=gene-NLI98_RS18220;Dbxref=Genbank:WP_024622880.1;Name=WP_024622880.1;gbkey=CDS;gene=entA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308662.1;locus_tag=NLI98_RS18220;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate dehydrogenase EntA;protein_id=WP_024622880.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3754791 3755642 . - . ID=gene-NLI98_RS18225;Name=entB;gbkey=Gene;gene=entB;gene_biotype=protein_coding;locus_tag=NLI98_RS18225;old_locus_tag=NLI98_18220 NZ_CP100601.1 Protein Homology CDS 3754791 3755642 . - 0 ID=cds-WP_020324582.1;Parent=gene-NLI98_RS18225;Dbxref=Genbank:WP_020324582.1;Name=WP_020324582.1;gbkey=CDS;gene=entB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324582.1;locus_tag=NLI98_RS18225;product=enterobactin biosynthesis bifunctional isochorismatase/aryl carrier protein EntB;protein_id=WP_020324582.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3755656 3757263 . - . ID=gene-NLI98_RS18230;Name=entE;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=NLI98_RS18230;old_locus_tag=NLI98_18225 NZ_CP100601.1 Protein Homology CDS 3755656 3757263 . - 0 ID=cds-WP_088498237.1;Parent=gene-NLI98_RS18230;Dbxref=Genbank:WP_088498237.1;Name=WP_088498237.1;gbkey=CDS;gene=entE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225747.1;locus_tag=NLI98_RS18230;product=(2%2C3-dihydroxybenzoyl)adenylate synthase EntE;protein_id=WP_088498237.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3757273 3758448 . - . ID=gene-NLI98_RS18235;Name=entC;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=NLI98_RS18235;old_locus_tag=NLI98_18230 NZ_CP100601.1 Protein Homology CDS 3757273 3758448 . - 0 ID=cds-WP_088498238.1;Parent=gene-NLI98_RS18235;Dbxref=Genbank:WP_088498238.1;Name=WP_088498238.1;Ontology_term=GO:0008909;gbkey=CDS;gene=entC;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225746.1;locus_tag=NLI98_RS18235;product=isochorismate synthase EntC;protein_id=WP_088498238.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3758637 3759596 . + . ID=gene-NLI98_RS18240;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=NLI98_RS18240;old_locus_tag=NLI98_18235 NZ_CP100601.1 Protein Homology CDS 3758637 3759596 . + 0 ID=cds-WP_004147526.1;Parent=gene-NLI98_RS18240;Dbxref=Genbank:WP_004147526.1;Name=WP_004147526.1;gbkey=CDS;gene=fepB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225745.1;locus_tag=NLI98_RS18240;product=Fe2+-enterobactin ABC transporter substrate-binding protein;protein_id=WP_004147526.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3759854 3761095 . - . ID=gene-NLI98_RS18245;Name=entS;gbkey=Gene;gene=entS;gene_biotype=protein_coding;locus_tag=NLI98_RS18245;old_locus_tag=NLI98_18240 NZ_CP100601.1 Protein Homology CDS 3759854 3761095 . - 0 ID=cds-WP_032421968.1;Parent=gene-NLI98_RS18245;Dbxref=Genbank:WP_032421968.1;Name=WP_032421968.1;Ontology_term=GO:0042930,GO:0042931;gbkey=CDS;gene=entS;go_function=enterobactin transmembrane transporter activity|0042931||IEA;go_process=enterobactin transport|0042930||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225744.1;locus_tag=NLI98_RS18245;product=enterobactin transporter EntS;protein_id=WP_032421968.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3761208 3762215 . + . ID=gene-NLI98_RS18250;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=NLI98_RS18250;old_locus_tag=NLI98_18245 NZ_CP100601.1 Protein Homology CDS 3761208 3762215 . + 0 ID=cds-WP_004176917.1;Parent=gene-NLI98_RS18250;Dbxref=Genbank:WP_004176917.1;Name=WP_004176917.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fepD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225743.1;locus_tag=NLI98_RS18250;product=Fe(3+)-siderophore ABC transporter permease;protein_id=WP_004176917.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3762212 3763204 . + . ID=gene-NLI98_RS18255;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=NLI98_RS18255;old_locus_tag=NLI98_18250 NZ_CP100601.1 Protein Homology CDS 3762212 3763204 . + 0 ID=cds-WP_004147521.1;Parent=gene-NLI98_RS18255;Dbxref=Genbank:WP_004147521.1;Name=WP_004147521.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fepG;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225742.1;locus_tag=NLI98_RS18255;product=iron-enterobactin ABC transporter permease;protein_id=WP_004147521.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3763201 3763995 . + . ID=gene-NLI98_RS18260;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=NLI98_RS18260;old_locus_tag=NLI98_18255 NZ_CP100601.1 Protein Homology CDS 3763201 3763995 . + 0 ID=cds-WP_002893737.1;Parent=gene-NLI98_RS18260;Dbxref=Genbank:WP_002893737.1;Name=WP_002893737.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fepC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225741.1;locus_tag=NLI98_RS18260;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=WP_002893737.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3764060 3767941 . - . ID=gene-NLI98_RS18265;Name=entF;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=NLI98_RS18265;old_locus_tag=NLI98_18260 NZ_CP100601.1 Protein Homology CDS 3764060 3767941 . - 0 ID=cds-WP_088498239.1;Parent=gene-NLI98_RS18265;Dbxref=Genbank:WP_088498239.1;Name=WP_088498239.1;Ontology_term=GO:0009058,GO:0003824,GO:0031177;gbkey=CDS;gene=entF;go_function=catalytic activity|0003824||IEA,phosphopantetheine binding|0031177||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225740.1;locus_tag=NLI98_RS18265;product=enterobactin non-ribosomal peptide synthetase EntF;protein_id=WP_088498239.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3767952 3768155 . - . ID=gene-NLI98_RS18270;Name=NLI98_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18270;old_locus_tag=NLI98_18265 NZ_CP100601.1 Protein Homology CDS 3767952 3768155 . - 0 ID=cds-WP_004176919.1;Parent=gene-NLI98_RS18270;Dbxref=Genbank:WP_004176919.1;Name=WP_004176919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225739.1;locus_tag=NLI98_RS18270;product=MbtH family NRPS accessory protein;protein_id=WP_004176919.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3768183 3769391 . - . ID=gene-NLI98_RS18275;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=NLI98_RS18275;old_locus_tag=NLI98_18270 NZ_CP100601.1 Protein Homology CDS 3768183 3769391 . - 0 ID=cds-WP_004176920.1;Parent=gene-NLI98_RS18275;Dbxref=Genbank:WP_004176920.1;Name=WP_004176920.1;Ontology_term=GO:0005506,GO:0008849;gbkey=CDS;gene=fes;go_function=iron ion binding|0005506||IEA,enterochelin esterase activity|0008849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225738.1;locus_tag=NLI98_RS18275;product=enterochelin esterase;protein_id=WP_004176920.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3769651 3771879 . + . ID=gene-NLI98_RS18280;Name=fepA;gbkey=Gene;gene=fepA;gene_biotype=protein_coding;locus_tag=NLI98_RS18280;old_locus_tag=NLI98_18275 NZ_CP100601.1 Protein Homology CDS 3769651 3771879 . + 0 ID=cds-WP_088498240.1;Parent=gene-NLI98_RS18280;Dbxref=Genbank:WP_088498240.1;Name=WP_088498240.1;gbkey=CDS;gene=fepA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225737.1;locus_tag=NLI98_RS18280;product=siderophore enterobactin receptor FepA;protein_id=WP_088498240.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3771946 3772605 . + . ID=gene-NLI98_RS18285;Name=entD;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=NLI98_RS18285;old_locus_tag=NLI98_18280 NZ_CP100601.1 Protein Homology CDS 3771946 3772605 . + 0 ID=cds-WP_064147068.1;Parent=gene-NLI98_RS18285;Dbxref=Genbank:WP_064147068.1;Name=WP_064147068.1;Ontology_term=GO:0009239,GO:0000287,GO:0008897,GO:0009366;gbkey=CDS;gene=entD;go_component=enterobactin synthetase complex|0009366||IEA;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=enterobactin biosynthetic process|0009239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004893531.1;locus_tag=NLI98_RS18285;product=enterobactin synthase subunit EntD;protein_id=WP_064147068.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3772723 3773664 . + . ID=gene-NLI98_RS18290;Name=NLI98_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18290;old_locus_tag=NLI98_18285 NZ_CP100601.1 Protein Homology CDS 3772723 3773664 . + 0 ID=cds-WP_004178959.1;Parent=gene-NLI98_RS18290;Dbxref=Genbank:WP_004178959.1;Name=WP_004178959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178959.1;locus_tag=NLI98_RS18290;product=D-ribose ABC transporter substrate-binding protein;protein_id=WP_004178959.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3773675 3774283 . + . ID=gene-NLI98_RS18295;Name=NLI98_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18295;old_locus_tag=NLI98_18290 NZ_CP100601.1 Protein Homology CDS 3773675 3774283 . + 0 ID=cds-WP_040224357.1;Parent=gene-NLI98_RS18295;Dbxref=Genbank:WP_040224357.1;Name=WP_040224357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004893534.1;locus_tag=NLI98_RS18295;product=DUF2291 family protein;protein_id=WP_040224357.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3774283 3775809 . + . ID=gene-NLI98_RS18300;Name=NLI98_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18300;old_locus_tag=NLI98_18295 NZ_CP100601.1 Protein Homology CDS 3774283 3775809 . + 0 ID=cds-WP_012068418.1;Parent=gene-NLI98_RS18300;Dbxref=Genbank:WP_012068418.1;Name=WP_012068418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160460.1;locus_tag=NLI98_RS18300;product=sugar ABC transporter ATP-binding protein;protein_id=WP_012068418.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3775811 3776899 . + . ID=gene-NLI98_RS18305;Name=NLI98_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18305;old_locus_tag=NLI98_18300 NZ_CP100601.1 Protein Homology CDS 3775811 3776899 . + 0 ID=cds-WP_004885708.1;Parent=gene-NLI98_RS18305;Dbxref=Genbank:WP_004885708.1;Name=WP_004885708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004885708.1;locus_tag=NLI98_RS18305;product=ABC transporter permease;protein_id=WP_004885708.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3777055 3778026 . + . ID=gene-NLI98_RS18310;Name=NLI98_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18310;old_locus_tag=NLI98_18305 NZ_CP100601.1 Protein Homology CDS 3777055 3778026 . + 0 ID=cds-WP_038806934.1;Parent=gene-NLI98_RS18310;Dbxref=Genbank:WP_038806934.1;Name=WP_038806934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178955.1;locus_tag=NLI98_RS18310;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_038806934.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3778016 3778966 . - . ID=gene-NLI98_RS18315;Name=NLI98_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18315;old_locus_tag=NLI98_18310 NZ_CP100601.1 Protein Homology CDS 3778016 3778966 . - 0 ID=cds-WP_004178954.1;Parent=gene-NLI98_RS18315;Dbxref=Genbank:WP_004178954.1;Name=WP_004178954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178954.1;locus_tag=NLI98_RS18315;product=sugar-binding transcriptional regulator;protein_id=WP_004178954.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3779278 3780108 . + . ID=gene-NLI98_RS18320;Name=NLI98_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18320;old_locus_tag=NLI98_18315 NZ_CP100601.1 Protein Homology CDS 3779278 3780108 . + 0 ID=cds-WP_004178953.1;Parent=gene-NLI98_RS18320;Dbxref=Genbank:WP_004178953.1;Name=WP_004178953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225734.1;locus_tag=NLI98_RS18320;product=transketolase;protein_id=WP_004178953.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3780101 3781051 . + . ID=gene-NLI98_RS18325;Name=NLI98_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18325;old_locus_tag=NLI98_18320 NZ_CP100601.1 Protein Homology CDS 3780101 3781051 . + 0 ID=cds-WP_042939194.1;Parent=gene-NLI98_RS18325;Dbxref=Genbank:WP_042939194.1;Name=WP_042939194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178952.1;locus_tag=NLI98_RS18325;product=transketolase;protein_id=WP_042939194.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3781086 3782504 . + . ID=gene-NLI98_RS18330;Name=NLI98_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18330;old_locus_tag=NLI98_18325 NZ_CP100601.1 Protein Homology CDS 3781086 3782504 . + 0 ID=cds-WP_023287353.1;Parent=gene-NLI98_RS18330;Dbxref=Genbank:WP_023287353.1;Name=WP_023287353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020803780.1;locus_tag=NLI98_RS18330;product=L-fucose/L-arabinose isomerase family protein;protein_id=WP_023287353.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3782519 3784018 . + . ID=gene-NLI98_RS18335;Name=NLI98_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18335;old_locus_tag=NLI98_18330 NZ_CP100601.1 Protein Homology CDS 3782519 3784018 . + 0 ID=cds-WP_088498241.1;Parent=gene-NLI98_RS18335;Dbxref=Genbank:WP_088498241.1;Name=WP_088498241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178950.1;locus_tag=NLI98_RS18335;product=FGGY-family carbohydrate kinase;protein_id=WP_088498241.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3784077 3784682 . - . ID=gene-NLI98_RS18340;Name=NLI98_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18340;old_locus_tag=NLI98_18335 NZ_CP100601.1 Protein Homology CDS 3784077 3784682 . - 0 ID=cds-WP_088498242.1;Parent=gene-NLI98_RS18340;Dbxref=Genbank:WP_088498242.1;Name=WP_088498242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968736.1;locus_tag=NLI98_RS18340;product=glutathione S-transferase;protein_id=WP_088498242.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3784936 3785829 . + . ID=gene-NLI98_RS18345;Name=NLI98_RS18345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18345;old_locus_tag=NLI98_18340 NZ_CP100601.1 Protein Homology CDS 3784936 3785829 . + 0 ID=cds-WP_088498243.1;Parent=gene-NLI98_RS18345;Dbxref=Genbank:WP_088498243.1;Name=WP_088498243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004142467.1;locus_tag=NLI98_RS18345;product=LysR substrate-binding domain-containing protein;protein_id=WP_088498243.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3785826 3786614 . - . ID=gene-NLI98_RS18350;Name=NLI98_RS18350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18350;old_locus_tag=NLI98_18345 NZ_CP100601.1 Protein Homology CDS 3785826 3786614 . - 0 ID=cds-WP_231539212.1;Parent=gene-NLI98_RS18350;Dbxref=Genbank:WP_231539212.1;Name=WP_231539212.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013117.2;locus_tag=NLI98_RS18350;product=mechanosensitive ion channel;protein_id=WP_231539212.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 3786662 3787082 . - . ID=gene-NLI98_RS18355;Name=NLI98_RS18355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS18355;old_locus_tag=NLI98_18350;pseudo=true NZ_CP100601.1 Protein Homology CDS 3786662 3787082 . - 0 ID=cds-NLI98_RS18355;Parent=gene-NLI98_RS18355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225720.1;locus_tag=NLI98_RS18355;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 3787307 3787753 . + . ID=gene-NLI98_RS18360;Name=ivy;gbkey=Gene;gene=ivy;gene_biotype=protein_coding;locus_tag=NLI98_RS18360;old_locus_tag=NLI98_18355 NZ_CP100601.1 Protein Homology CDS 3787307 3787753 . + 0 ID=cds-WP_004178946.1;Parent=gene-NLI98_RS18360;Dbxref=Genbank:WP_004178946.1;Name=WP_004178946.1;gbkey=CDS;gene=ivy;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225719.1;locus_tag=NLI98_RS18360;product=Ivy family C-type lysozyme inhibitor;protein_id=WP_004178946.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3787799 3789832 . - . ID=gene-NLI98_RS18365;Name=betT;gbkey=Gene;gene=betT;gene_biotype=protein_coding;locus_tag=NLI98_RS18365;old_locus_tag=NLI98_18360 NZ_CP100601.1 Protein Homology CDS 3787799 3789832 . - 0 ID=cds-WP_004142478.1;Parent=gene-NLI98_RS18365;Dbxref=Genbank:WP_004142478.1;Name=WP_004142478.1;gbkey=CDS;gene=betT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225718.1;locus_tag=NLI98_RS18365;product=choline BCCT transporter BetT;protein_id=WP_004142478.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3789961 3790548 . + . ID=gene-NLI98_RS18370;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=NLI98_RS18370;old_locus_tag=NLI98_18365 NZ_CP100601.1 Protein Homology CDS 3789961 3790548 . + 0 ID=cds-WP_004151671.1;Parent=gene-NLI98_RS18370;Dbxref=Genbank:WP_004151671.1;Name=WP_004151671.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225717.1;locus_tag=NLI98_RS18370;product=transcriptional regulator BetI;protein_id=WP_004151671.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3790562 3792034 . + . ID=gene-NLI98_RS18375;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=NLI98_RS18375;old_locus_tag=NLI98_18370 NZ_CP100601.1 Protein Homology CDS 3790562 3792034 . + 0 ID=cds-WP_004147503.1;Parent=gene-NLI98_RS18375;Dbxref=Genbank:WP_004147503.1;Name=WP_004147503.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225716.1;locus_tag=NLI98_RS18375;product=betaine-aldehyde dehydrogenase;protein_id=WP_004147503.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3792048 3793712 . + . ID=gene-NLI98_RS18380;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=NLI98_RS18380;old_locus_tag=NLI98_18375 NZ_CP100601.1 Protein Homology CDS 3792048 3793712 . + 0 ID=cds-WP_088498244.1;Parent=gene-NLI98_RS18380;Dbxref=Genbank:WP_088498244.1;Name=WP_088498244.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225715.1;locus_tag=NLI98_RS18380;product=choline dehydrogenase;protein_id=WP_088498244.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3793833 3794528 . - . ID=gene-NLI98_RS18385;Name=NLI98_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18385;old_locus_tag=NLI98_18380 NZ_CP100601.1 Protein Homology CDS 3793833 3794528 . - 0 ID=cds-WP_002893466.1;Parent=gene-NLI98_RS18385;Dbxref=Genbank:WP_002893466.1;Name=WP_002893466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225714.1;locus_tag=NLI98_RS18385;product=GNAT family N-acetyltransferase;protein_id=WP_002893466.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3794734 3796302 . + . ID=gene-NLI98_RS18390;Name=NLI98_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18390;old_locus_tag=NLI98_18385 NZ_CP100601.1 Protein Homology CDS 3794734 3796302 . + 0 ID=cds-WP_088498245.1;Parent=gene-NLI98_RS18390;Dbxref=Genbank:WP_088498245.1;Name=WP_088498245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225713.1;locus_tag=NLI98_RS18390;product=ABC transporter substrate-binding protein;protein_id=WP_088498245.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3796422 3797444 . + . ID=gene-NLI98_RS18395;Name=NLI98_RS18395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18395;old_locus_tag=NLI98_18390 NZ_CP100601.1 Protein Homology CDS 3796422 3797444 . + 0 ID=cds-WP_088498246.1;Parent=gene-NLI98_RS18395;Dbxref=Genbank:WP_088498246.1;Name=WP_088498246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225712.1;locus_tag=NLI98_RS18395;product=ABC transporter permease;protein_id=WP_088498246.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3797444 3798277 . + . ID=gene-NLI98_RS18400;Name=NLI98_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18400;old_locus_tag=NLI98_18395 NZ_CP100601.1 Protein Homology CDS 3797444 3798277 . + 0 ID=cds-WP_004142505.1;Parent=gene-NLI98_RS18400;Dbxref=Genbank:WP_004142505.1;Name=WP_004142505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225711.1;locus_tag=NLI98_RS18400;product=ABC transporter permease;protein_id=WP_004142505.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3798270 3799106 . + . ID=gene-NLI98_RS18405;Name=NLI98_RS18405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18405;old_locus_tag=NLI98_18400 NZ_CP100601.1 Protein Homology CDS 3798270 3799106 . + 0 ID=cds-WP_004176938.1;Parent=gene-NLI98_RS18405;Dbxref=Genbank:WP_004176938.1;Name=WP_004176938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225710.1;locus_tag=NLI98_RS18405;product=ABC transporter ATP-binding protein;protein_id=WP_004176938.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3799093 3799797 . + . ID=gene-NLI98_RS18410;Name=NLI98_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18410;old_locus_tag=NLI98_18405 NZ_CP100601.1 Protein Homology CDS 3799093 3799797 . + 0 ID=cds-WP_004178936.1;Parent=gene-NLI98_RS18410;Dbxref=Genbank:WP_004178936.1;Name=WP_004178936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225709.1;locus_tag=NLI98_RS18410;product=ABC transporter ATP-binding protein;protein_id=WP_004178936.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3799943 3800080 . + . ID=gene-NLI98_RS18415;Name=NLI98_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18415;old_locus_tag=NLI98_18410 NZ_CP100601.1 GeneMarkS-2+ CDS 3799943 3800080 . + 0 ID=cds-WP_021228915.1;Parent=gene-NLI98_RS18415;Dbxref=Genbank:WP_021228915.1;Name=WP_021228915.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS18415;product=hypothetical protein;protein_id=WP_021228915.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3800650 3801987 . - . ID=gene-NLI98_RS18420;Name=NLI98_RS18420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18420;old_locus_tag=NLI98_18415 NZ_CP100601.1 Protein Homology CDS 3800650 3801987 . - 0 ID=cds-WP_064114758.1;Parent=gene-NLI98_RS18420;Dbxref=Genbank:WP_064114758.1;Name=WP_064114758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225707.1;locus_tag=NLI98_RS18420;product=aspartate aminotransferase family protein;protein_id=WP_064114758.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3802168 3802932 . + . ID=gene-NLI98_RS18425;Name=NLI98_RS18425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18425;old_locus_tag=NLI98_18420 NZ_CP100601.1 Protein Homology CDS 3802168 3802932 . + 0 ID=cds-WP_088498338.1;Parent=gene-NLI98_RS18425;Dbxref=Genbank:WP_088498338.1;Name=WP_088498338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225706.1;locus_tag=NLI98_RS18425;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_088498338.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3802986 3803747 . - . ID=gene-NLI98_RS18430;Name=NLI98_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18430;old_locus_tag=NLI98_18425 NZ_CP100601.1 Protein Homology CDS 3802986 3803747 . - 0 ID=cds-WP_004151676.1;Parent=gene-NLI98_RS18430;Dbxref=Genbank:WP_004151676.1;Name=WP_004151676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225705.1;locus_tag=NLI98_RS18430;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_004151676.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3803740 3804405 . - . ID=gene-NLI98_RS18435;Name=NLI98_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18435;old_locus_tag=NLI98_18430 NZ_CP100601.1 Protein Homology CDS 3803740 3804405 . - 0 ID=cds-WP_012968744.1;Parent=gene-NLI98_RS18435;Dbxref=Genbank:WP_012968744.1;Name=WP_012968744.1;Note=The N-terminal region of this protein%2C as described by TIGR01726%2C is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits%2C which specificities that include histidine%2C arginine%2C glutamine%2C glutamate%2C L-cystine (sic)%2C the opines (in Agrobacterium) octopine and nopaline%2C etc.;Ontology_term=GO:0015837,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225704.1;locus_tag=NLI98_RS18435;product=ABC transporter permease subunit;protein_id=WP_012968744.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3804420 3805061 . - . ID=gene-NLI98_RS18440;Name=NLI98_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18440;old_locus_tag=NLI98_18435 NZ_CP100601.1 Protein Homology CDS 3804420 3805061 . - 0 ID=cds-WP_002893187.1;Parent=gene-NLI98_RS18440;Dbxref=Genbank:WP_002893187.1;Name=WP_002893187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225703.1;locus_tag=NLI98_RS18440;product=amino acid ABC transporter permease;protein_id=WP_002893187.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3805109 3805960 . - . ID=gene-NLI98_RS18445;Name=NLI98_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18445;old_locus_tag=NLI98_18440 NZ_CP100601.1 Protein Homology CDS 3805109 3805960 . - 0 ID=cds-WP_088498339.1;Parent=gene-NLI98_RS18445;Dbxref=Genbank:WP_088498339.1;Name=WP_088498339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225702.1;locus_tag=NLI98_RS18445;product=transporter substrate-binding domain-containing protein;protein_id=WP_088498339.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3806202 3807665 . + . ID=gene-NLI98_RS18450;Name=NLI98_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18450;old_locus_tag=NLI98_18445 NZ_CP100601.1 Protein Homology CDS 3806202 3807665 . + 0 ID=cds-WP_088498340.1;Parent=gene-NLI98_RS18450;Dbxref=Genbank:WP_088498340.1;Name=WP_088498340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225701.1;locus_tag=NLI98_RS18450;product=PLP-dependent aminotransferase family protein;protein_id=WP_088498340.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3807662 3808996 . - . ID=gene-NLI98_RS18455;Name=NLI98_RS18455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18455;old_locus_tag=NLI98_18450 NZ_CP100601.1 Protein Homology CDS 3807662 3808996 . - 0 ID=cds-WP_012068408.1;Parent=gene-NLI98_RS18455;Dbxref=Genbank:WP_012068408.1;Name=WP_012068408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225700.1;locus_tag=NLI98_RS18455;product=PLP-dependent aminotransferase family protein;protein_id=WP_012068408.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3809121 3810029 . + . ID=gene-NLI98_RS18460;Name=NLI98_RS18460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18460;old_locus_tag=NLI98_18455 NZ_CP100601.1 Protein Homology CDS 3809121 3810029 . + 0 ID=cds-WP_019704902.1;Parent=gene-NLI98_RS18460;Dbxref=Genbank:WP_019704902.1;Name=WP_019704902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704902.1;locus_tag=NLI98_RS18460;product=DMT family transporter;protein_id=WP_019704902.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3810133 3811401 . - . ID=gene-NLI98_RS18465;Name=NLI98_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18465;old_locus_tag=NLI98_18460 NZ_CP100601.1 Protein Homology CDS 3810133 3811401 . - 0 ID=cds-WP_019704901.1;Parent=gene-NLI98_RS18465;Dbxref=Genbank:WP_019704901.1;Name=WP_019704901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012737600.1;locus_tag=NLI98_RS18465;product=Zn-dependent hydrolase;protein_id=WP_019704901.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3811499 3812509 . - . ID=gene-NLI98_RS18470;Name=NLI98_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18470;old_locus_tag=NLI98_18465 NZ_CP100601.1 Protein Homology CDS 3811499 3812509 . - 0 ID=cds-WP_004191439.1;Parent=gene-NLI98_RS18470;Dbxref=Genbank:WP_004191439.1;Name=WP_004191439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017899022.1;locus_tag=NLI98_RS18470;product=ABC transporter ATP-binding protein;protein_id=WP_004191439.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3812499 3813536 . - . ID=gene-NLI98_RS18475;Name=NLI98_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18475;old_locus_tag=NLI98_18470 NZ_CP100601.1 Protein Homology CDS 3812499 3813536 . - 0 ID=cds-WP_009308109.1;Parent=gene-NLI98_RS18475;Dbxref=Genbank:WP_009308109.1;Name=WP_009308109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017899021.1;locus_tag=NLI98_RS18475;product=ABC transporter ATP-binding protein;protein_id=WP_009308109.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3813540 3814433 . - . ID=gene-NLI98_RS18480;Name=NLI98_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18480;old_locus_tag=NLI98_18475 NZ_CP100601.1 Protein Homology CDS 3813540 3814433 . - 0 ID=cds-WP_019704899.1;Parent=gene-NLI98_RS18480;Dbxref=Genbank:WP_019704899.1;Name=WP_019704899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805546.1;locus_tag=NLI98_RS18480;product=ABC transporter permease;protein_id=WP_019704899.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3814436 3815389 . - . ID=gene-NLI98_RS18485;Name=NLI98_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18485;old_locus_tag=NLI98_18480 NZ_CP100601.1 Protein Homology CDS 3814436 3815389 . - 0 ID=cds-WP_004178910.1;Parent=gene-NLI98_RS18485;Dbxref=Genbank:WP_004178910.1;Name=WP_004178910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012968749.1;locus_tag=NLI98_RS18485;product=ABC transporter permease;protein_id=WP_004178910.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3815408 3817075 . - . ID=gene-NLI98_RS18490;Name=NLI98_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18490;old_locus_tag=NLI98_18485 NZ_CP100601.1 Protein Homology CDS 3815408 3817075 . - 0 ID=cds-WP_019704898.1;Parent=gene-NLI98_RS18490;Dbxref=Genbank:WP_019704898.1;Name=WP_019704898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178908.1;locus_tag=NLI98_RS18490;product=ABC transporter substrate-binding protein;protein_id=WP_019704898.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3817402 3818517 . + . ID=gene-NLI98_RS18495;Name=NLI98_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18495;old_locus_tag=NLI98_18490 NZ_CP100601.1 Protein Homology CDS 3817402 3818517 . + 0 ID=cds-WP_004176954.1;Parent=gene-NLI98_RS18495;Dbxref=Genbank:WP_004176954.1;Name=WP_004176954.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=cellular modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225698.1;locus_tag=NLI98_RS18495;product=YbdK family carboxylate-amine ligase;protein_id=WP_004176954.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3818565 3819284 . + . ID=gene-NLI98_RS18500;Name=NLI98_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18500;old_locus_tag=NLI98_18495 NZ_CP100601.1 Protein Homology CDS 3818565 3819284 . + 0 ID=cds-WP_004176956.1;Parent=gene-NLI98_RS18500;Dbxref=Genbank:WP_004176956.1;Name=WP_004176956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225697.1;locus_tag=NLI98_RS18500;product=phosphodiester glycosidase family protein;protein_id=WP_004176956.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3819633 3822725 . - . ID=gene-NLI98_RS18505;Name=NLI98_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18505;old_locus_tag=NLI98_18500 NZ_CP100601.1 Protein Homology CDS 3819633 3822725 . - 0 ID=cds-WP_088498341.1;Parent=gene-NLI98_RS18505;Dbxref=Genbank:WP_088498341.1;Name=WP_088498341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225694.1;locus_tag=NLI98_RS18505;product=efflux RND transporter permease subunit;protein_id=WP_088498341.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3822739 3823818 . - . ID=gene-NLI98_RS18510;Name=NLI98_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18510;old_locus_tag=NLI98_18505 NZ_CP100601.1 Protein Homology CDS 3822739 3823818 . - 0 ID=cds-WP_088498342.1;Parent=gene-NLI98_RS18510;Dbxref=Genbank:WP_088498342.1;Name=WP_088498342.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225693.1;locus_tag=NLI98_RS18510;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_088498342.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3823871 3826594 . - . ID=gene-NLI98_RS18515;Name=NLI98_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18515;old_locus_tag=NLI98_18510 NZ_CP100601.1 Protein Homology CDS 3823871 3826594 . - 0 ID=cds-WP_172676896.1;Parent=gene-NLI98_RS18515;Dbxref=Genbank:WP_172676896.1;Name=WP_172676896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225692.1;locus_tag=NLI98_RS18515;product=cation-transporting P-type ATPase;protein_id=WP_172676896.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3827096 3827344 . + . ID=gene-NLI98_RS18520;Name=NLI98_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18520;old_locus_tag=NLI98_18515 NZ_CP100601.1 Protein Homology CDS 3827096 3827344 . + 0 ID=cds-WP_002893037.1;Parent=gene-NLI98_RS18520;Dbxref=Genbank:WP_002893037.1;Name=WP_002893037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225690.1;locus_tag=NLI98_RS18520;product=DUF1158 domain-containing protein;protein_id=WP_002893037.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3827362 3827703 . - . ID=gene-NLI98_RS18525;Name=NLI98_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18525;old_locus_tag=NLI98_18520 NZ_CP100601.1 Protein Homology CDS 3827362 3827703 . - 0 ID=cds-WP_002893035.1;Parent=gene-NLI98_RS18525;Dbxref=Genbank:WP_002893035.1;Name=WP_002893035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225689.1;locus_tag=NLI98_RS18525;product=RamA family antibiotic efflux transcriptional regulator;protein_id=WP_002893035.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3827734 3828849 . - . ID=gene-NLI98_RS18530;Name=NLI98_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18530;old_locus_tag=NLI98_18525 NZ_CP100601.1 Protein Homology CDS 3827734 3828849 . - 0 ID=cds-WP_172676897.1;Parent=gene-NLI98_RS18530;Dbxref=Genbank:WP_172676897.1;Name=WP_172676897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225688.1;locus_tag=NLI98_RS18530;product=MBL fold metallo-hydrolase;protein_id=WP_172676897.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3829028 3829609 . + . ID=gene-NLI98_RS18535;Name=NLI98_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18535;old_locus_tag=NLI98_18530 NZ_CP100601.1 Protein Homology CDS 3829028 3829609 . + 0 ID=cds-WP_004176968.1;Parent=gene-NLI98_RS18535;Dbxref=Genbank:WP_004176968.1;Name=WP_004176968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004176968.1;locus_tag=NLI98_RS18535;product=TetR/AcrR family transcriptional regulator;protein_id=WP_004176968.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3829609 3829977 . + . ID=gene-NLI98_RS18540;Name=NLI98_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18540;old_locus_tag=NLI98_18535 NZ_CP100601.1 Protein Homology CDS 3829609 3829977 . + 0 ID=cds-WP_004142557.1;Parent=gene-NLI98_RS18540;Dbxref=Genbank:WP_004142557.1;Name=WP_004142557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225686.1;locus_tag=NLI98_RS18540;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_004142557.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3830097 3830750 . + . ID=gene-NLI98_RS18545;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=NLI98_RS18545;old_locus_tag=NLI98_18540 NZ_CP100601.1 Protein Homology CDS 3830097 3830750 . + 0 ID=cds-WP_004178896.1;Parent=gene-NLI98_RS18545;Dbxref=Genbank:WP_004178896.1;Name=WP_004178896.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225685.1;locus_tag=NLI98_RS18545;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_004178896.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3831015 3831302 . - . ID=gene-NLI98_RS18550;Name=NLI98_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18550;old_locus_tag=NLI98_18545 NZ_CP100601.1 Protein Homology CDS 3831015 3831302 . - 0 ID=cds-WP_004142561.1;Parent=gene-NLI98_RS18550;Dbxref=Genbank:WP_004142561.1;Name=WP_004142561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858885.1;locus_tag=NLI98_RS18550;product=helix-turn-helix transcriptional regulator;protein_id=WP_004142561.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3831295 3831612 . - . ID=gene-NLI98_RS18555;Name=NLI98_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18555;old_locus_tag=NLI98_18550 NZ_CP100601.1 Protein Homology CDS 3831295 3831612 . - 0 ID=cds-WP_004142563.1;Parent=gene-NLI98_RS18555;Dbxref=Genbank:WP_004142563.1;Name=WP_004142563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004142563.1;locus_tag=NLI98_RS18555;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_004142563.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3831797 3832840 . - . ID=gene-NLI98_RS18560;Name=NLI98_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18560;old_locus_tag=NLI98_18555 NZ_CP100601.1 Protein Homology CDS 3831797 3832840 . - 0 ID=cds-WP_088498345.1;Parent=gene-NLI98_RS18560;Dbxref=Genbank:WP_088498345.1;Name=WP_088498345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012542527.1;locus_tag=NLI98_RS18560;product=DUF2157 domain-containing protein;protein_id=WP_088498345.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3833510 3834376 . - . ID=gene-NLI98_RS18565;Name=NLI98_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18565;old_locus_tag=NLI98_18560 NZ_CP100601.1 Protein Homology CDS 3833510 3834376 . - 0 ID=cds-WP_004151823.1;Parent=gene-NLI98_RS18565;Dbxref=Genbank:WP_004151823.1;Name=WP_004151823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225675.1;locus_tag=NLI98_RS18565;product=helix-turn-helix transcriptional regulator;protein_id=WP_004151823.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3834485 3835912 . + . ID=gene-NLI98_RS18570;Name=NLI98_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18570;old_locus_tag=NLI98_18565 NZ_CP100601.1 Protein Homology CDS 3834485 3835912 . + 0 ID=cds-WP_009308097.1;Parent=gene-NLI98_RS18570;Dbxref=Genbank:WP_009308097.1;Name=WP_009308097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225674.1;locus_tag=NLI98_RS18570;product=MFS transporter;protein_id=WP_009308097.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3835983 3837227 . + . ID=gene-NLI98_RS18575;Name=NLI98_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18575;old_locus_tag=NLI98_18570 NZ_CP100601.1 Protein Homology CDS 3835983 3837227 . + 0 ID=cds-WP_004142570.1;Parent=gene-NLI98_RS18575;Dbxref=Genbank:WP_004142570.1;Name=WP_004142570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225673.1;locus_tag=NLI98_RS18575;product=mechanosensitive ion channel family protein;protein_id=WP_004142570.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3837231 3838211 . - . ID=gene-NLI98_RS18580;Name=NLI98_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18580;old_locus_tag=NLI98_18575 NZ_CP100601.1 Protein Homology CDS 3837231 3838211 . - 0 ID=cds-WP_004176981.1;Parent=gene-NLI98_RS18580;Dbxref=Genbank:WP_004176981.1;Name=WP_004176981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225672.1;locus_tag=NLI98_RS18580;product=LacI family transcriptional regulator;protein_id=WP_004176981.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3838460 3838876 . + . ID=gene-NLI98_RS18585;Name=NLI98_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18585;old_locus_tag=NLI98_18580 NZ_CP100601.1 Protein Homology CDS 3838460 3838876 . + 0 ID=cds-WP_023307443.1;Parent=gene-NLI98_RS18585;Dbxref=Genbank:WP_023307443.1;Name=WP_023307443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225661.1;locus_tag=NLI98_RS18585;product=Exc2 family lipoprotein;protein_id=WP_023307443.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3838896 3840047 . - . ID=gene-NLI98_RS18590;Name=NLI98_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18590;old_locus_tag=NLI98_18585 NZ_CP100601.1 Protein Homology CDS 3838896 3840047 . - 0 ID=cds-WP_004183287.1;Parent=gene-NLI98_RS18590;Dbxref=Genbank:WP_004183287.1;Name=WP_004183287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225660.1;locus_tag=NLI98_RS18590;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_004183287.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3840049 3841071 . - . ID=gene-NLI98_RS18595;Name=NLI98_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18595;old_locus_tag=NLI98_18590 NZ_CP100601.1 Protein Homology CDS 3840049 3841071 . - 0 ID=cds-WP_004191458.1;Parent=gene-NLI98_RS18595;Dbxref=Genbank:WP_004191458.1;Name=WP_004191458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225659.1;locus_tag=NLI98_RS18595;product=sugar phosphate isomerase/epimerase;protein_id=WP_004191458.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3841088 3842293 . - . ID=gene-NLI98_RS18600;Name=NLI98_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18600;old_locus_tag=NLI98_18595 NZ_CP100601.1 Protein Homology CDS 3841088 3842293 . - 0 ID=cds-WP_004198867.1;Parent=gene-NLI98_RS18600;Dbxref=Genbank:WP_004198867.1;Name=WP_004198867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225658.1;locus_tag=NLI98_RS18600;product=MFS transporter;protein_id=WP_004198867.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3842481 3843857 . - . ID=gene-NLI98_RS18605;Name=pheP;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=NLI98_RS18605;old_locus_tag=NLI98_18600 NZ_CP100601.1 Protein Homology CDS 3842481 3843857 . - 0 ID=cds-WP_004151811.1;Parent=gene-NLI98_RS18605;Dbxref=Genbank:WP_004151811.1;Name=WP_004151811.1;Ontology_term=GO:0006865;gbkey=CDS;gene=pheP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225657.1;locus_tag=NLI98_RS18605;product=phenylalanine transporter;protein_id=WP_004151811.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3843965 3846163 . - . ID=gene-NLI98_RS18610;Name=NLI98_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18610;old_locus_tag=NLI98_18605 NZ_CP100601.1 Protein Homology CDS 3843965 3846163 . - 0 ID=cds-WP_004191460.1;Parent=gene-NLI98_RS18610;Dbxref=Genbank:WP_004191460.1;Name=WP_004191460.1;Ontology_term=GO:0015891,GO:0015343,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225656.1;locus_tag=NLI98_RS18610;product=TonB-dependent siderophore receptor;protein_id=WP_004191460.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3846223 3847305 . - . ID=gene-NLI98_RS18615;Name=NLI98_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18615;old_locus_tag=NLI98_18610 NZ_CP100601.1 Protein Homology CDS 3846223 3847305 . - 0 ID=cds-WP_004147457.1;Parent=gene-NLI98_RS18615;Dbxref=Genbank:WP_004147457.1;Name=WP_004147457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225655.1;locus_tag=NLI98_RS18615;product=YncE family protein;protein_id=WP_004147457.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3847701 3849185 . - . ID=gene-NLI98_RS18620;Name=NLI98_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18620;old_locus_tag=NLI98_18615 NZ_CP100601.1 Protein Homology CDS 3847701 3849185 . - 0 ID=cds-WP_004191461.1;Parent=gene-NLI98_RS18620;Dbxref=Genbank:WP_004191461.1;Name=WP_004191461.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462044.1;locus_tag=NLI98_RS18620;product=aldehyde dehydrogenase family protein;protein_id=WP_004191461.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3849344 3850645 . + . ID=gene-NLI98_RS18625;Name=NLI98_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18625;old_locus_tag=NLI98_18620 NZ_CP100601.1 Protein Homology CDS 3849344 3850645 . + 0 ID=cds-WP_088498346.1;Parent=gene-NLI98_RS18625;Dbxref=Genbank:WP_088498346.1;Name=WP_088498346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225653.1;locus_tag=NLI98_RS18625;product=FAD-binding oxidoreductase;protein_id=WP_088498346.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3850659 3851024 . + . ID=gene-NLI98_RS18630;Name=NLI98_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18630;old_locus_tag=NLI98_18625 NZ_CP100601.1 Protein Homology CDS 3850659 3851024 . + 0 ID=cds-WP_002892824.1;Parent=gene-NLI98_RS18630;Dbxref=Genbank:WP_002892824.1;Name=WP_002892824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225652.1;locus_tag=NLI98_RS18630;product=cupin domain-containing protein;protein_id=WP_002892824.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3851428 3852927 . + . ID=gene-NLI98_RS18635;Name=NLI98_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18635;old_locus_tag=NLI98_18630 NZ_CP100601.1 Protein Homology CDS 3851428 3852927 . + 0 ID=cds-WP_002892820.1;Parent=gene-NLI98_RS18635;Dbxref=Genbank:WP_002892820.1;Name=WP_002892820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225651.1;locus_tag=NLI98_RS18635;product=APC family permease;protein_id=WP_002892820.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3852905 3853447 . + . ID=gene-NLI98_RS18640;Name=NLI98_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18640;old_locus_tag=NLI98_18635 NZ_CP100601.1 Protein Homology CDS 3852905 3853447 . + 0 ID=cds-WP_004178886.1;Parent=gene-NLI98_RS18640;Dbxref=Genbank:WP_004178886.1;Name=WP_004178886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004211618.1;locus_tag=NLI98_RS18640;product=DUF3156 family protein;protein_id=WP_004178886.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3853465 3853827 . - . ID=gene-NLI98_RS18645;Name=NLI98_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18645;old_locus_tag=NLI98_18640 NZ_CP100601.1 Protein Homology CDS 3853465 3853827 . - 0 ID=cds-WP_004178885.1;Parent=gene-NLI98_RS18645;Dbxref=Genbank:WP_004178885.1;Name=WP_004178885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178885.1;locus_tag=NLI98_RS18645;product=helix-turn-helix domain-containing protein;protein_id=WP_004178885.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3853828 3854130 . - . ID=gene-NLI98_RS18650;Name=NLI98_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18650;old_locus_tag=NLI98_18645 NZ_CP100601.1 Protein Homology CDS 3853828 3854130 . - 0 ID=cds-WP_004178884.1;Parent=gene-NLI98_RS18650;Dbxref=Genbank:WP_004178884.1;Name=WP_004178884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004142601.1;locus_tag=NLI98_RS18650;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_004178884.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3854214 3855329 . - . ID=gene-NLI98_RS18655;Name=NLI98_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18655;old_locus_tag=NLI98_18650 NZ_CP100601.1 Protein Homology CDS 3854214 3855329 . - 0 ID=cds-WP_004178883.1;Parent=gene-NLI98_RS18655;Dbxref=Genbank:WP_004178883.1;Name=WP_004178883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946862.1;locus_tag=NLI98_RS18655;product=class II histone deacetylase;protein_id=WP_004178883.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3855346 3856518 . - . ID=gene-NLI98_RS18660;Name=NLI98_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18660;old_locus_tag=NLI98_18655 NZ_CP100601.1 Protein Homology CDS 3855346 3856518 . - 0 ID=cds-WP_004178882.1;Parent=gene-NLI98_RS18660;Dbxref=Genbank:WP_004178882.1;Name=WP_004178882.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225648.1;locus_tag=NLI98_RS18660;product=MFS transporter;protein_id=WP_004178882.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3856636 3857319 . - . ID=gene-NLI98_RS18665;Name=NLI98_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18665;old_locus_tag=NLI98_18660 NZ_CP100601.1 Protein Homology CDS 3856636 3857319 . - 0 ID=cds-WP_002892774.1;Parent=gene-NLI98_RS18665;Dbxref=Genbank:WP_002892774.1;Name=WP_002892774.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225647.1;locus_tag=NLI98_RS18665;product=LuxR family transcriptional regulator;protein_id=WP_002892774.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3857745 3858932 . + . ID=gene-NLI98_RS18670;Name=NLI98_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18670;old_locus_tag=NLI98_18665 NZ_CP100601.1 Protein Homology CDS 3857745 3858932 . + 0 ID=cds-WP_004176995.1;Parent=gene-NLI98_RS18670;Dbxref=Genbank:WP_004176995.1;Name=WP_004176995.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225646.1;locus_tag=NLI98_RS18670;product=anaerobic sulfatase maturase;protein_id=WP_004176995.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3858977 3860710 . + . ID=gene-NLI98_RS18675;Name=NLI98_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18675;old_locus_tag=NLI98_18670 NZ_CP100601.1 Protein Homology CDS 3858977 3860710 . + 0 ID=cds-WP_004178881.1;Parent=gene-NLI98_RS18675;Dbxref=Genbank:WP_004178881.1;Name=WP_004178881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225645.1;locus_tag=NLI98_RS18675;product=arylsulfatase;protein_id=WP_004178881.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3860798 3861574 . + . ID=gene-NLI98_RS18680;Name=NLI98_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18680;old_locus_tag=NLI98_18675 NZ_CP100601.1 Protein Homology CDS 3860798 3861574 . + 0 ID=cds-WP_004178880.1;Parent=gene-NLI98_RS18680;Dbxref=Genbank:WP_004178880.1;Name=WP_004178880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225644.1;locus_tag=NLI98_RS18680;product=SDR family oxidoreductase;protein_id=WP_004178880.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3861600 3862607 . + . ID=gene-NLI98_RS18685;Name=NLI98_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18685;old_locus_tag=NLI98_18680 NZ_CP100601.1 Protein Homology CDS 3861600 3862607 . + 0 ID=cds-WP_254918179.1;Parent=gene-NLI98_RS18685;Dbxref=Genbank:WP_254918179.1;Name=WP_254918179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225643.1;locus_tag=NLI98_RS18685;product=MoaF N-terminal domain-containing protein;protein_id=WP_254918179.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3862961 3863914 . - . ID=gene-NLI98_RS18690;Name=NLI98_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18690;old_locus_tag=NLI98_18685 NZ_CP100601.1 Protein Homology CDS 3862961 3863914 . - 0 ID=cds-WP_004147443.1;Parent=gene-NLI98_RS18690;Dbxref=Genbank:WP_004147443.1;Name=WP_004147443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225642.1;locus_tag=NLI98_RS18690;product=aldo/keto reductase;protein_id=WP_004147443.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3864043 3864819 . - . ID=gene-NLI98_RS18695;Name=NLI98_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18695;old_locus_tag=NLI98_18690 NZ_CP100601.1 Protein Homology CDS 3864043 3864819 . - 0 ID=cds-WP_002892707.1;Parent=gene-NLI98_RS18695;Dbxref=Genbank:WP_002892707.1;Name=WP_002892707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225641.1;locus_tag=NLI98_RS18695;product=ABC transporter substrate-binding protein;protein_id=WP_002892707.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3864839 3866017 . - . ID=gene-NLI98_RS18700;Name=NLI98_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18700;old_locus_tag=NLI98_18695 NZ_CP100601.1 Protein Homology CDS 3864839 3866017 . - 0 ID=cds-WP_029602943.1;Parent=gene-NLI98_RS18700;Dbxref=Genbank:WP_029602943.1;Name=WP_029602943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225640.1;locus_tag=NLI98_RS18700;product=M20 family metallopeptidase;protein_id=WP_029602943.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3866233 3866370 . - . ID=gene-NLI98_RS18705;Name=NLI98_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18705;old_locus_tag=NLI98_18700 NZ_CP100601.1 Protein Homology CDS 3866233 3866370 . - 0 ID=cds-WP_032409074.1;Parent=gene-NLI98_RS18705;Dbxref=Genbank:WP_032409074.1;Name=WP_032409074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225639.1;locus_tag=NLI98_RS18705;product=hypothetical protein;protein_id=WP_032409074.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3866333 3866458 . + . ID=gene-NLI98_RS18710;Name=NLI98_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18710;old_locus_tag=NLI98_18705 NZ_CP100601.1 Protein Homology CDS 3866333 3866458 . + 0 ID=cds-WP_019705351.1;Parent=gene-NLI98_RS18710;Dbxref=Genbank:WP_019705351.1;Name=WP_019705351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225638.1;locus_tag=NLI98_RS18710;product=hypothetical protein;protein_id=WP_019705351.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3866523 3866978 . - . ID=gene-NLI98_RS18715;Name=NLI98_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18715;old_locus_tag=NLI98_18710 NZ_CP100601.1 Protein Homology CDS 3866523 3866978 . - 0 ID=cds-WP_002892701.1;Parent=gene-NLI98_RS18715;Dbxref=Genbank:WP_002892701.1;Name=WP_002892701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225637.1;locus_tag=NLI98_RS18715;product=RcnB family protein;protein_id=WP_002892701.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3867158 3867547 . - . ID=gene-NLI98_RS18720;Name=NLI98_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18720;old_locus_tag=NLI98_18715 NZ_CP100601.1 Protein Homology CDS 3867158 3867547 . - 0 ID=cds-WP_002892699.1;Parent=gene-NLI98_RS18720;Dbxref=Genbank:WP_002892699.1;Name=WP_002892699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225636.1;locus_tag=NLI98_RS18720;product=hypothetical protein;protein_id=WP_002892699.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3867819 3868937 . + . ID=gene-NLI98_RS18725;Name=NLI98_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18725;old_locus_tag=NLI98_18720 NZ_CP100601.1 Protein Homology CDS 3867819 3868937 . + 0 ID=cds-WP_048291951.1;Parent=gene-NLI98_RS18725;Dbxref=Genbank:WP_048291951.1;Name=WP_048291951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225634.1;locus_tag=NLI98_RS18725;product=ABC transporter substrate-binding protein;protein_id=WP_048291951.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3868998 3870026 . + . ID=gene-NLI98_RS18730;Name=NLI98_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18730;old_locus_tag=NLI98_18725 NZ_CP100601.1 Protein Homology CDS 3868998 3870026 . + 0 ID=cds-WP_074187751.1;Parent=gene-NLI98_RS18730;Dbxref=Genbank:WP_074187751.1;Name=WP_074187751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225633.1;locus_tag=NLI98_RS18730;product=iron ABC transporter permease;protein_id=WP_074187751.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3870023 3870820 . + . ID=gene-NLI98_RS18735;Name=NLI98_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18735;old_locus_tag=NLI98_18730 NZ_CP100601.1 Protein Homology CDS 3870023 3870820 . + 0 ID=cds-WP_002892698.1;Parent=gene-NLI98_RS18735;Dbxref=Genbank:WP_002892698.1;Name=WP_002892698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225632.1;locus_tag=NLI98_RS18735;product=ABC transporter ATP-binding protein;protein_id=WP_002892698.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3870864 3872006 . - . ID=gene-NLI98_RS18740;Name=NLI98_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18740;old_locus_tag=NLI98_18735 NZ_CP100601.1 Protein Homology CDS 3870864 3872006 . - 0 ID=cds-WP_004223411.1;Parent=gene-NLI98_RS18740;Dbxref=Genbank:WP_004223411.1;Name=WP_004223411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225631.1;locus_tag=NLI98_RS18740;product=HlyD family secretion protein;protein_id=WP_004223411.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3872006 3872350 . - . ID=gene-NLI98_RS18745;Name=NLI98_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18745;old_locus_tag=NLI98_18740 NZ_CP100601.1 Protein Homology CDS 3872006 3872350 . - 0 ID=cds-WP_004178874.1;Parent=gene-NLI98_RS18745;Dbxref=Genbank:WP_004178874.1;Name=WP_004178874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225630.1;locus_tag=NLI98_RS18745;product=DUF3302 domain-containing protein;protein_id=WP_004178874.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3872486 3873127 . - . ID=gene-NLI98_RS18750;Name=NLI98_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18750;old_locus_tag=NLI98_18745 NZ_CP100601.1 Protein Homology CDS 3872486 3873127 . - 0 ID=cds-WP_004151802.1;Parent=gene-NLI98_RS18750;Dbxref=Genbank:WP_004151802.1;Name=WP_004151802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225629.1;locus_tag=NLI98_RS18750;product=helix-turn-helix domain-containing protein;protein_id=WP_004151802.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3873366 3874289 . + . ID=gene-NLI98_RS18755;Name=NLI98_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18755;old_locus_tag=NLI98_18750 NZ_CP100601.1 Protein Homology CDS 3873366 3874289 . + 0 ID=cds-WP_004142652.1;Parent=gene-NLI98_RS18755;Dbxref=Genbank:WP_004142652.1;Name=WP_004142652.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225627.1;locus_tag=NLI98_RS18755;product=aminoimidazole riboside kinase;protein_id=WP_004142652.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3874454 3875971 . + . ID=gene-NLI98_RS18760;Name=NLI98_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18760;old_locus_tag=NLI98_18755 NZ_CP100601.1 Protein Homology CDS 3874454 3875971 . + 0 ID=cds-WP_004147437.1;Parent=gene-NLI98_RS18760;Dbxref=Genbank:WP_004147437.1;Name=WP_004147437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225626.1;locus_tag=NLI98_RS18760;product=carbohydrate porin;protein_id=WP_004147437.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3876076 3877446 . + . ID=gene-NLI98_RS18765;Name=NLI98_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18765;old_locus_tag=NLI98_18760 NZ_CP100601.1 Protein Homology CDS 3876076 3877446 . + 0 ID=cds-WP_002892640.1;Parent=gene-NLI98_RS18765;Dbxref=Genbank:WP_002892640.1;Name=WP_002892640.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225625.1;locus_tag=NLI98_RS18765;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_002892640.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3877446 3878846 . + . ID=gene-NLI98_RS18770;Name=NLI98_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18770;old_locus_tag=NLI98_18765 NZ_CP100601.1 Protein Homology CDS 3877446 3878846 . + 0 ID=cds-WP_049108841.1;Parent=gene-NLI98_RS18770;Dbxref=Genbank:WP_049108841.1;Name=WP_049108841.1;Ontology_term=GO:0005975,GO:0004564;gbkey=CDS;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225624.1;locus_tag=NLI98_RS18770;product=sucrose-6-phosphate hydrolase;protein_id=WP_049108841.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3878870 3879880 . + . ID=gene-NLI98_RS18775;Name=NLI98_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18775;old_locus_tag=NLI98_18770 NZ_CP100601.1 Protein Homology CDS 3878870 3879880 . + 0 ID=cds-WP_014907957.1;Parent=gene-NLI98_RS18775;Dbxref=Genbank:WP_014907957.1;Name=WP_014907957.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225623.1;locus_tag=NLI98_RS18775;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_014907957.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 3879928 3880537 . - . ID=gene-NLI98_RS18780;Name=NLI98_RS18780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS18780;old_locus_tag=NLI98_18775;pseudo=true NZ_CP100601.1 Protein Homology CDS 3879928 3880537 . - 0 ID=cds-NLI98_RS18780;Parent=gene-NLI98_RS18780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225622.1;locus_tag=NLI98_RS18780;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 3880721 3881743 . - . ID=gene-NLI98_RS18785;Name=NLI98_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18785;old_locus_tag=NLI98_18780 NZ_CP100601.1 Protein Homology CDS 3880721 3881743 . - 0 ID=cds-WP_004152946.1;Parent=gene-NLI98_RS18785;Dbxref=Genbank:WP_004152946.1;Name=WP_004152946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225620.1;locus_tag=NLI98_RS18785;product=ABC transporter permease;protein_id=WP_004152946.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3881763 3883247 . - . ID=gene-NLI98_RS18790;Name=NLI98_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18790;old_locus_tag=NLI98_18785 NZ_CP100601.1 Protein Homology CDS 3881763 3883247 . - 0 ID=cds-WP_102024206.1;Parent=gene-NLI98_RS18790;Dbxref=Genbank:WP_102024206.1;Name=WP_102024206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225619.1;locus_tag=NLI98_RS18790;product=sugar ABC transporter ATP-binding protein;protein_id=WP_102024206.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3883280 3884203 . - . ID=gene-NLI98_RS18795;Name=NLI98_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18795;old_locus_tag=NLI98_18790 NZ_CP100601.1 Protein Homology CDS 3883280 3884203 . - 0 ID=cds-WP_002892597.1;Parent=gene-NLI98_RS18795;Dbxref=Genbank:WP_002892597.1;Name=WP_002892597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225618.1;locus_tag=NLI98_RS18795;product=sugar ABC transporter substrate-binding protein;protein_id=WP_002892597.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3884633 3885652 . - . ID=gene-NLI98_RS18800;Name=NLI98_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18800;old_locus_tag=NLI98_18795 NZ_CP100601.1 Protein Homology CDS 3884633 3885652 . - 0 ID=cds-WP_004191476.1;Parent=gene-NLI98_RS18800;Dbxref=Genbank:WP_004191476.1;Name=WP_004191476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225617.1;locus_tag=NLI98_RS18800;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_004191476.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3885754 3886761 . + . ID=gene-NLI98_RS18805;Name=NLI98_RS18805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18805;old_locus_tag=NLI98_18800 NZ_CP100601.1 Protein Homology CDS 3885754 3886761 . + 0 ID=cds-WP_004183249.1;Parent=gene-NLI98_RS18805;Dbxref=Genbank:WP_004183249.1;Name=WP_004183249.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225616.1;locus_tag=NLI98_RS18805;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_004183249.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3887709 3888740 . - . ID=gene-NLI98_RS18810;Name=NLI98_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18810;old_locus_tag=NLI98_18805 NZ_CP100601.1 Protein Homology CDS 3887709 3888740 . - 0 ID=cds-WP_004177013.1;Parent=gene-NLI98_RS18810;Dbxref=Genbank:WP_004177013.1;Name=WP_004177013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225615.1;locus_tag=NLI98_RS18810;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_004177013.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3888750 3889922 . - . ID=gene-NLI98_RS18815;Name=NLI98_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18815;old_locus_tag=NLI98_18810 NZ_CP100601.1 Protein Homology CDS 3888750 3889922 . - 0 ID=cds-WP_088498350.1;Parent=gene-NLI98_RS18815;Dbxref=Genbank:WP_088498350.1;Name=WP_088498350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225614.1;locus_tag=NLI98_RS18815;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_088498350.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3889919 3890839 . - . ID=gene-NLI98_RS18820;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=NLI98_RS18820;old_locus_tag=NLI98_18815 NZ_CP100601.1 Protein Homology CDS 3889919 3890839 . - 0 ID=cds-WP_004178867.1;Parent=gene-NLI98_RS18820;Dbxref=Genbank:WP_004178867.1;Name=WP_004178867.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225613.1;locus_tag=NLI98_RS18820;product=myo-inosose-2 dehydratase;protein_id=WP_004178867.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3891411 3891836 . + . ID=gene-NLI98_RS18825;Name=NLI98_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18825;old_locus_tag=NLI98_18820 NZ_CP100601.1 Protein Homology CDS 3891411 3891836 . + 0 ID=cds-WP_004893732.1;Parent=gene-NLI98_RS18825;Dbxref=Genbank:WP_004893732.1;Name=WP_004893732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225612.1;locus_tag=NLI98_RS18825;product=hypothetical protein;protein_id=WP_004893732.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3891913 3893430 . - . ID=gene-NLI98_RS18830;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=NLI98_RS18830;old_locus_tag=NLI98_18825 NZ_CP100601.1 Protein Homology CDS 3891913 3893430 . - 0 ID=cds-WP_002892491.1;Parent=gene-NLI98_RS18830;Dbxref=Genbank:WP_002892491.1;Name=WP_002892491.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001740376.1;locus_tag=NLI98_RS18830;product=lysine--tRNA ligase;protein_id=WP_002892491.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3893762 3895237 . - . ID=gene-NLI98_RS18835;Name=dtpD;gbkey=Gene;gene=dtpD;gene_biotype=protein_coding;locus_tag=NLI98_RS18835;old_locus_tag=NLI98_18830 NZ_CP100601.1 Protein Homology CDS 3893762 3895237 . - 0 ID=cds-WP_004147424.1;Parent=gene-NLI98_RS18835;Dbxref=Genbank:WP_004147424.1;Name=WP_004147424.1;Ontology_term=GO:0006857,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpD;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=oligopeptide transport|0006857||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225610.1;locus_tag=NLI98_RS18835;product=dipeptide permease DtpD;protein_id=WP_004147424.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3895297 3897444 . - . ID=gene-NLI98_RS18840;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=NLI98_RS18840;old_locus_tag=NLI98_18835 NZ_CP100601.1 Protein Homology CDS 3895297 3897444 . - 0 ID=cds-WP_002892486.1;Parent=gene-NLI98_RS18840;Dbxref=Genbank:WP_002892486.1;Name=WP_002892486.1;gbkey=CDS;gene=cadA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225609.1;locus_tag=NLI98_RS18840;product=lysine decarboxylase CadA;protein_id=WP_002892486.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3897527 3898861 . - . ID=gene-NLI98_RS18845;Name=cadB;gbkey=Gene;gene=cadB;gene_biotype=protein_coding;locus_tag=NLI98_RS18845;old_locus_tag=NLI98_18840 NZ_CP100601.1 Protein Homology CDS 3897527 3898861 . - 0 ID=cds-WP_002892484.1;Parent=gene-NLI98_RS18845;Dbxref=Genbank:WP_002892484.1;Name=WP_002892484.1;Ontology_term=GO:0043872;gbkey=CDS;gene=cadB;go_function=lysine:cadaverine antiporter activity|0043872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225608.1;locus_tag=NLI98_RS18845;product=cadaverine/lysine antiporter;protein_id=WP_002892484.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3899227 3900816 . - . ID=gene-NLI98_RS18850;Name=cadC;gbkey=Gene;gene=cadC;gene_biotype=protein_coding;locus_tag=NLI98_RS18850;old_locus_tag=NLI98_18845 NZ_CP100601.1 Protein Homology CDS 3899227 3900816 . - 0 ID=cds-WP_032432743.1;Parent=gene-NLI98_RS18850;Dbxref=Genbank:WP_032432743.1;Name=WP_032432743.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=cadC;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225607.1;locus_tag=NLI98_RS18850;product=lysine decarboxylation/transport transcriptional activator CadC;protein_id=WP_032432743.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3901109 3901381 . - . ID=gene-NLI98_RS18855;Name=NLI98_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18855;old_locus_tag=NLI98_18850 NZ_CP100601.1 Protein Homology CDS 3901109 3901381 . - 0 ID=cds-WP_002892402.1;Parent=gene-NLI98_RS18855;Dbxref=Genbank:WP_002892402.1;Name=WP_002892402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225606.1;locus_tag=NLI98_RS18855;product=DUF1471 domain-containing protein;protein_id=WP_002892402.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3901482 3902402 . - . ID=gene-NLI98_RS18860;Name=NLI98_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18860;old_locus_tag=NLI98_18855 NZ_CP100601.1 Protein Homology CDS 3901482 3902402 . - 0 ID=cds-WP_002892400.1;Parent=gene-NLI98_RS18860;Dbxref=Genbank:WP_002892400.1;Name=WP_002892400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225605.1;locus_tag=NLI98_RS18860;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee;protein_id=WP_002892400.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3902913 3903779 . + . ID=gene-NLI98_RS18865;Name=NLI98_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18865;old_locus_tag=NLI98_18860 NZ_CP100601.1 Protein Homology CDS 3902913 3903779 . + 0 ID=cds-WP_040245540.1;Parent=gene-NLI98_RS18865;Dbxref=Genbank:WP_040245540.1;Name=WP_040245540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225604.1;locus_tag=NLI98_RS18865;product=GNAT family N-acetyltransferase;protein_id=WP_040245540.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3903852 3905156 . - . ID=gene-NLI98_RS18870;Name=NLI98_RS18870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18870;old_locus_tag=NLI98_18865 NZ_CP100601.1 Protein Homology CDS 3903852 3905156 . - 0 ID=cds-WP_004178865.1;Parent=gene-NLI98_RS18870;Dbxref=Genbank:WP_004178865.1;Name=WP_004178865.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225597.1;locus_tag=NLI98_RS18870;product=citrate synthase;protein_id=WP_004178865.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3905202 3905342 . - . ID=gene-NLI98_RS18875;Name=NLI98_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18875;old_locus_tag=NLI98_18870 NZ_CP100601.1 Protein Homology CDS 3905202 3905342 . - 0 ID=cds-WP_004142684.1;Parent=gene-NLI98_RS18875;Dbxref=Genbank:WP_004142684.1;Name=WP_004142684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225596.1;locus_tag=NLI98_RS18875;product=hypothetical protein;protein_id=WP_004142684.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3905667 3905837 . + . ID=gene-NLI98_RS18880;Name=NLI98_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18880;old_locus_tag=NLI98_18875 NZ_CP100601.1 Protein Homology CDS 3905667 3905837 . + 0 ID=cds-WP_002892370.1;Parent=gene-NLI98_RS18880;Dbxref=Genbank:WP_002892370.1;Name=WP_002892370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225595.1;locus_tag=NLI98_RS18880;product=hypothetical protein;protein_id=WP_002892370.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3905916 3906317 . - . ID=gene-NLI98_RS18885;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=protein_coding;locus_tag=NLI98_RS18885;old_locus_tag=NLI98_18880 NZ_CP100601.1 Protein Homology CDS 3905916 3906317 . - 0 ID=cds-WP_002892366.1;Parent=gene-NLI98_RS18885;Dbxref=Genbank:WP_002892366.1;Name=WP_002892366.1;Ontology_term=GO:0019628;gbkey=CDS;gene=uraH;go_process=urate catabolic process|0019628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225594.1;locus_tag=NLI98_RS18885;product=hydroxyisourate hydrolase;protein_id=WP_002892366.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3906713 3907006 . - . ID=gene-NLI98_RS18890;Name=NLI98_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18890;old_locus_tag=NLI98_18885 NZ_CP100601.1 Protein Homology CDS 3906713 3907006 . - 0 ID=cds-WP_002892360.1;Parent=gene-NLI98_RS18890;Dbxref=Genbank:WP_002892360.1;Name=WP_002892360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002892360.1;locus_tag=NLI98_RS18890;product=hypothetical protein;protein_id=WP_002892360.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 3907284 3907449 . + . ID=gene-NLI98_RS18895;Name=NLI98_RS18895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS18895;old_locus_tag=NLI98_18890;partial=true;pseudo=true;start_range=.,3907284 NZ_CP100601.1 Protein Homology CDS 3907284 3907449 . + 0 ID=cds-NLI98_RS18895;Parent=gene-NLI98_RS18895;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007847479.1;locus_tag=NLI98_RS18895;partial=true;product=hypothetical protein;pseudo=true;start_range=.,3907284;transl_table=11 NZ_CP100601.1 RefSeq gene 3907857 3908051 . + . ID=gene-NLI98_RS18900;Name=NLI98_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18900;old_locus_tag=NLI98_18895 NZ_CP100601.1 Protein Homology CDS 3907857 3908051 . + 0 ID=cds-WP_004202379.1;Parent=gene-NLI98_RS18900;Dbxref=Genbank:WP_004202379.1;Name=WP_004202379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375050.1;locus_tag=NLI98_RS18900;product=AlpA family transcriptional regulator;protein_id=WP_004202379.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3908278 3908715 . - . ID=gene-NLI98_RS18905;Name=NLI98_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18905;old_locus_tag=NLI98_18900 NZ_CP100601.1 GeneMarkS-2+ CDS 3908278 3908715 . - 0 ID=cds-WP_004202377.1;Parent=gene-NLI98_RS18905;Dbxref=Genbank:WP_004202377.1;Name=WP_004202377.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS18905;product=hypothetical protein;protein_id=WP_004202377.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3908718 3909176 . - . ID=gene-NLI98_RS18910;Name=NLI98_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18910;old_locus_tag=NLI98_18905 NZ_CP100601.1 Protein Homology CDS 3908718 3909176 . - 0 ID=cds-WP_004202375.1;Parent=gene-NLI98_RS18910;Dbxref=Genbank:WP_004202375.1;Name=WP_004202375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001371753.1;locus_tag=NLI98_RS18910;product=DUF4065 domain-containing protein;protein_id=WP_004202375.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3909541 3911358 . - . ID=gene-NLI98_RS18915;Name=NLI98_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18915;old_locus_tag=NLI98_18910 NZ_CP100601.1 Protein Homology CDS 3909541 3911358 . - 0 ID=cds-WP_022065132.1;Parent=gene-NLI98_RS18915;Dbxref=Genbank:WP_022065132.1;Name=WP_022065132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202373.1;locus_tag=NLI98_RS18915;product=hypothetical protein;protein_id=WP_022065132.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3911390 3911584 . - . ID=gene-NLI98_RS18920;Name=NLI98_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18920;old_locus_tag=NLI98_18915 NZ_CP100601.1 Protein Homology CDS 3911390 3911584 . - 0 ID=cds-WP_088498351.1;Parent=gene-NLI98_RS18920;Dbxref=Genbank:WP_088498351.1;Name=WP_088498351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202372.1;locus_tag=NLI98_RS18920;product=hypothetical protein;protein_id=WP_088498351.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3911783 3912328 . + . ID=gene-NLI98_RS18925;Name=NLI98_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18925;old_locus_tag=NLI98_18920 NZ_CP100601.1 Protein Homology CDS 3911783 3912328 . + 0 ID=cds-WP_088498352.1;Parent=gene-NLI98_RS18925;Dbxref=Genbank:WP_088498352.1;Name=WP_088498352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202371.1;locus_tag=NLI98_RS18925;product=hypothetical protein;protein_id=WP_088498352.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3912485 3912718 . - . ID=gene-NLI98_RS18930;Name=NLI98_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18930;old_locus_tag=NLI98_18925 NZ_CP100601.1 GeneMarkS-2+ CDS 3912485 3912718 . - 0 ID=cds-WP_022065758.1;Parent=gene-NLI98_RS18930;Dbxref=Genbank:WP_022065758.1;Name=WP_022065758.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS18930;product=hypothetical protein;protein_id=WP_022065758.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3912784 3913923 . - . ID=gene-NLI98_RS18935;Name=NLI98_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18935;old_locus_tag=NLI98_18930 NZ_CP100601.1 Protein Homology CDS 3912784 3913923 . - 0 ID=cds-WP_022065757.1;Parent=gene-NLI98_RS18935;Dbxref=Genbank:WP_022065757.1;Name=WP_022065757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831733.1;locus_tag=NLI98_RS18935;product=hypothetical protein;protein_id=WP_022065757.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3914421 3914780 . + . ID=gene-NLI98_RS18940;Name=NLI98_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18940;old_locus_tag=NLI98_18935 NZ_CP100601.1 Protein Homology CDS 3914421 3914780 . + 0 ID=cds-WP_004202368.1;Parent=gene-NLI98_RS18940;Dbxref=Genbank:WP_004202368.1;Name=WP_004202368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001405000.1;locus_tag=NLI98_RS18940;product=hypothetical protein;protein_id=WP_004202368.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3914773 3915315 . - . ID=gene-NLI98_RS18945;Name=NLI98_RS18945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18945;old_locus_tag=NLI98_18940 NZ_CP100601.1 Protein Homology CDS 3914773 3915315 . - 0 ID=cds-WP_004202366.1;Parent=gene-NLI98_RS18945;Dbxref=Genbank:WP_004202366.1;Name=WP_004202366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016244020.1;locus_tag=NLI98_RS18945;product=plasmid pRiA4b ORF-3 family protein;protein_id=WP_004202366.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3915436 3915621 . - . ID=gene-NLI98_RS18950;Name=NLI98_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18950;old_locus_tag=NLI98_18945 NZ_CP100601.1 Protein Homology CDS 3915436 3915621 . - 0 ID=cds-WP_004202362.1;Parent=gene-NLI98_RS18950;Dbxref=Genbank:WP_004202362.1;Name=WP_004202362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436675.1;locus_tag=NLI98_RS18950;product=hypothetical protein;protein_id=WP_004202362.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3915687 3916061 . - . ID=gene-NLI98_RS18955;Name=NLI98_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18955;old_locus_tag=NLI98_18950 NZ_CP100601.1 GeneMarkS-2+ CDS 3915687 3916061 . - 0 ID=cds-WP_048994692.1;Parent=gene-NLI98_RS18955;Dbxref=Genbank:WP_048994692.1;Name=WP_048994692.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS18955;product=hypothetical protein;protein_id=WP_048994692.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3916414 3916791 . - . ID=gene-NLI98_RS18960;Name=NLI98_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18960;old_locus_tag=NLI98_18955 NZ_CP100601.1 Protein Homology CDS 3916414 3916791 . - 0 ID=cds-WP_024191441.1;Parent=gene-NLI98_RS18960;Dbxref=Genbank:WP_024191441.1;Name=WP_024191441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014914986.1;locus_tag=NLI98_RS18960;product=hypothetical protein;protein_id=WP_024191441.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3917217 3917498 . - . ID=gene-NLI98_RS18965;Name=NLI98_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18965;old_locus_tag=NLI98_18960 NZ_CP100601.1 Protein Homology CDS 3917217 3917498 . - 0 ID=cds-WP_064177553.1;Parent=gene-NLI98_RS18965;Dbxref=Genbank:WP_064177553.1;Name=WP_064177553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000617443.1;locus_tag=NLI98_RS18965;product=PerC family transcriptional regulator;protein_id=WP_064177553.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3917510 3917896 . - . ID=gene-NLI98_RS18970;Name=NLI98_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18970;old_locus_tag=NLI98_18965 NZ_CP100601.1 Protein Homology CDS 3917510 3917896 . - 0 ID=cds-WP_088498353.1;Parent=gene-NLI98_RS18970;Dbxref=Genbank:WP_088498353.1;Name=WP_088498353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005009086.1;locus_tag=NLI98_RS18970;product=single-stranded DNA-binding protein;protein_id=WP_088498353.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3918180 3919409 . - . ID=gene-NLI98_RS18975;Name=NLI98_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18975;old_locus_tag=NLI98_18970 NZ_CP100601.1 Protein Homology CDS 3918180 3919409 . - 0 ID=cds-WP_088498357.1;Parent=gene-NLI98_RS18975;Dbxref=Genbank:WP_088498357.1;Name=WP_088498357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202356.1;locus_tag=NLI98_RS18975;product=GIY-YIG nuclease family protein;protein_id=WP_088498357.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3919716 3921830 . - . ID=gene-NLI98_RS18980;Name=NLI98_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18980;old_locus_tag=NLI98_18975 NZ_CP100601.1 Protein Homology CDS 3919716 3921830 . - 0 ID=cds-WP_088498354.1;Parent=gene-NLI98_RS18980;Dbxref=Genbank:WP_088498354.1;Name=WP_088498354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177029.1;locus_tag=NLI98_RS18980;product=DUF927 domain-containing protein;protein_id=WP_088498354.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3921827 3922042 . - . ID=gene-NLI98_RS18985;Name=NLI98_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18985;old_locus_tag=NLI98_18980 NZ_CP100601.1 Protein Homology CDS 3921827 3922042 . - 0 ID=cds-WP_088498355.1;Parent=gene-NLI98_RS18985;Dbxref=Genbank:WP_088498355.1;Name=WP_088498355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177030.1;locus_tag=NLI98_RS18985;product=hypothetical protein;protein_id=WP_088498355.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3922039 3922302 . - . ID=gene-NLI98_RS18990;Name=NLI98_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18990;old_locus_tag=NLI98_18985 NZ_CP100601.1 Protein Homology CDS 3922039 3922302 . - 0 ID=cds-WP_004202353.1;Parent=gene-NLI98_RS18990;Dbxref=Genbank:WP_004202353.1;Name=WP_004202353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202353.1;locus_tag=NLI98_RS18990;product=hypothetical protein;protein_id=WP_004202353.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3922299 3922616 . - . ID=gene-NLI98_RS18995;Name=NLI98_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS18995;old_locus_tag=NLI98_18990 NZ_CP100601.1 Protein Homology CDS 3922299 3922616 . - 0 ID=cds-WP_004202352.1;Parent=gene-NLI98_RS18995;Dbxref=Genbank:WP_004202352.1;Name=WP_004202352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177032.1;locus_tag=NLI98_RS18995;product=hypothetical protein;protein_id=WP_004202352.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3922613 3922792 . - . ID=gene-NLI98_RS19000;Name=NLI98_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19000;old_locus_tag=NLI98_18995 NZ_CP100601.1 Protein Homology CDS 3922613 3922792 . - 0 ID=cds-WP_022064556.1;Parent=gene-NLI98_RS19000;Dbxref=Genbank:WP_022064556.1;Name=WP_022064556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177033.1;locus_tag=NLI98_RS19000;product=hypothetical protein;protein_id=WP_022064556.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3922785 3923579 . - . ID=gene-NLI98_RS19005;Name=NLI98_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19005;old_locus_tag=NLI98_19000 NZ_CP100601.1 Protein Homology CDS 3922785 3923579 . - 0 ID=cds-WP_022064555.1;Parent=gene-NLI98_RS19005;Dbxref=Genbank:WP_022064555.1;Name=WP_022064555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177034.1;locus_tag=NLI98_RS19005;product=host cell division inhibitor Icd-like protein;protein_id=WP_022064555.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3923576 3923755 . - . ID=gene-NLI98_RS19010;Name=NLI98_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19010;old_locus_tag=NLI98_19005 NZ_CP100601.1 Protein Homology CDS 3923576 3923755 . - 0 ID=cds-WP_004202343.1;Parent=gene-NLI98_RS19010;Dbxref=Genbank:WP_004202343.1;Name=WP_004202343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014837681.1;locus_tag=NLI98_RS19010;product=DUF4222 domain-containing protein;protein_id=WP_004202343.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3923748 3924557 . - . ID=gene-NLI98_RS19015;Name=NLI98_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19015;old_locus_tag=NLI98_19010 NZ_CP100601.1 Protein Homology CDS 3923748 3924557 . - 0 ID=cds-WP_004202342.1;Parent=gene-NLI98_RS19015;Dbxref=Genbank:WP_004202342.1;Name=WP_004202342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177036.1;locus_tag=NLI98_RS19015;product=antA/AntB antirepressor family protein;protein_id=WP_004202342.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3924571 3925005 . - . ID=gene-NLI98_RS19020;Name=NLI98_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19020;old_locus_tag=NLI98_19015 NZ_CP100601.1 Protein Homology CDS 3924571 3925005 . - 0 ID=cds-WP_004202341.1;Parent=gene-NLI98_RS19020;Dbxref=Genbank:WP_004202341.1;Name=WP_004202341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535037.1;locus_tag=NLI98_RS19020;product=hypothetical protein;protein_id=WP_004202341.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3925005 3925202 . - . ID=gene-NLI98_RS19025;Name=NLI98_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19025;old_locus_tag=NLI98_19020 NZ_CP100601.1 Protein Homology CDS 3925005 3925202 . - 0 ID=cds-WP_022064554.1;Parent=gene-NLI98_RS19025;Dbxref=Genbank:WP_022064554.1;Name=WP_022064554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015462155.1;locus_tag=NLI98_RS19025;product=AlpA family transcriptional regulator;protein_id=WP_022064554.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3925430 3926155 . - . ID=gene-NLI98_RS19030;Name=NLI98_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19030;old_locus_tag=NLI98_19025 NZ_CP100601.1 Protein Homology CDS 3925430 3926155 . - 0 ID=cds-WP_022064553.1;Parent=gene-NLI98_RS19030;Dbxref=Genbank:WP_022064553.1;Name=WP_022064553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526646.1;locus_tag=NLI98_RS19030;product=hypothetical protein;protein_id=WP_022064553.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3926299 3927513 . - . ID=gene-NLI98_RS19035;Name=NLI98_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19035;old_locus_tag=NLI98_19030 NZ_CP100601.1 Protein Homology CDS 3926299 3927513 . - 0 ID=cds-WP_004202336.1;Parent=gene-NLI98_RS19035;Dbxref=Genbank:WP_004202336.1;Name=WP_004202336.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146471.1;locus_tag=NLI98_RS19035;product=tyrosine-type recombinase/integrase;protein_id=WP_004202336.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3927679 3927755 . - . ID=gene-NLI98_RS19040;Name=NLI98_RS19040;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS19040;old_locus_tag=NLI98_19035 NZ_CP100601.1 tRNAscan-SE tRNA 3927679 3927755 . - . ID=rna-NLI98_RS19040;Parent=gene-NLI98_RS19040;anticodon=(pos:complement(3927719..3927721));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS19040;product=tRNA-Arg NZ_CP100601.1 tRNAscan-SE exon 3927679 3927755 . - . ID=exon-NLI98_RS19040-1;Parent=rna-NLI98_RS19040;anticodon=(pos:complement(3927719..3927721));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS19040;product=tRNA-Arg NZ_CP100601.1 RefSeq gene 3928095 3928961 . + . ID=gene-NLI98_RS19045;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=NLI98_RS19045;old_locus_tag=NLI98_19040 NZ_CP100601.1 Protein Homology CDS 3928095 3928961 . + 0 ID=cds-WP_004143017.1;Parent=gene-NLI98_RS19045;Dbxref=Genbank:WP_004143017.1;Name=WP_004143017.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225533.1;locus_tag=NLI98_RS19045;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_004143017.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3928963 3929175 . + . ID=gene-NLI98_RS19050;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=NLI98_RS19050;old_locus_tag=NLI98_19045 NZ_CP100601.1 Protein Homology CDS 3928963 3929175 . + 0 ID=cds-WP_004143016.1;Parent=gene-NLI98_RS19050;Dbxref=Genbank:WP_004143016.1;Name=WP_004143016.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225532.1;locus_tag=NLI98_RS19050;product=ribosome-associated protein YbcJ;protein_id=WP_004143016.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3929221 3930606 . - . ID=gene-NLI98_RS19055;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=NLI98_RS19055;old_locus_tag=NLI98_19050 NZ_CP100601.1 Protein Homology CDS 3929221 3930606 . - 0 ID=cds-WP_004143010.1;Parent=gene-NLI98_RS19055;Dbxref=Genbank:WP_004143010.1;Name=WP_004143010.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125243.1;locus_tag=NLI98_RS19055;product=cysteine--tRNA ligase;protein_id=WP_004143010.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3930782 3931276 . + . ID=gene-NLI98_RS19060;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=NLI98_RS19060;old_locus_tag=NLI98_19055 NZ_CP100601.1 Protein Homology CDS 3930782 3931276 . + 0 ID=cds-WP_004151319.1;Parent=gene-NLI98_RS19060;Dbxref=Genbank:WP_004151319.1;Name=WP_004151319.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465360.1;locus_tag=NLI98_RS19060;product=peptidylprolyl isomerase B;protein_id=WP_004151319.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3931280 3932002 . + . ID=gene-NLI98_RS19065;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=NLI98_RS19065;old_locus_tag=NLI98_19060 NZ_CP100601.1 Protein Homology CDS 3931280 3932002 . + 0 ID=cds-WP_019705339.1;Parent=gene-NLI98_RS19065;Dbxref=Genbank:WP_019705339.1;Name=WP_019705339.1;Ontology_term=GO:0009245,GO:0008758;gbkey=CDS;gene=lpxH;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225529.1;locus_tag=NLI98_RS19065;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_019705339.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3932110 3932448 . + . ID=gene-NLI98_RS19070;Name=NLI98_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19070;old_locus_tag=NLI98_19065 NZ_CP100601.1 Protein Homology CDS 3932110 3932448 . + 0 ID=cds-WP_088498358.1;Parent=gene-NLI98_RS19070;Dbxref=Genbank:WP_088498358.1;Name=WP_088498358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225528.1;locus_tag=NLI98_RS19070;product=hypothetical protein;protein_id=WP_088498358.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3932545 3933054 . + . ID=gene-NLI98_RS19075;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=NLI98_RS19075;old_locus_tag=NLI98_19070 NZ_CP100601.1 Protein Homology CDS 3932545 3933054 . + 0 ID=cds-WP_004151322.1;Parent=gene-NLI98_RS19075;Dbxref=Genbank:WP_004151322.1;Name=WP_004151322.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225527.1;locus_tag=NLI98_RS19075;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_004151322.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3933051 3934118 . + . ID=gene-NLI98_RS19080;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=NLI98_RS19080;old_locus_tag=NLI98_19075 NZ_CP100601.1 Protein Homology CDS 3933051 3934118 . + 0 ID=cds-WP_004143002.1;Parent=gene-NLI98_RS19080;Dbxref=Genbank:WP_004143002.1;Name=WP_004143002.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225526.1;locus_tag=NLI98_RS19080;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_004143002.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3934230 3935306 . + . ID=gene-NLI98_RS19085;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=NLI98_RS19085;old_locus_tag=NLI98_19080 NZ_CP100601.1 Protein Homology CDS 3934230 3935306 . + 0 ID=cds-WP_088498359.1;Parent=gene-NLI98_RS19085;Dbxref=Genbank:WP_088498359.1;Name=WP_088498359.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225525.1;locus_tag=NLI98_RS19085;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_088498359.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3935414 3936559 . - . ID=gene-NLI98_RS19090;Name=NLI98_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19090;old_locus_tag=NLI98_19085 NZ_CP100601.1 Protein Homology CDS 3935414 3936559 . - 0 ID=cds-WP_004142997.1;Parent=gene-NLI98_RS19090;Dbxref=Genbank:WP_004142997.1;Name=WP_004142997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225524.1;locus_tag=NLI98_RS19090;product=porin;protein_id=WP_004142997.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3936651 3936764 . + . ID=gene-NLI98_RS19095;Name=NLI98_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19095;old_locus_tag=NLI98_19090 NZ_CP100601.1 Protein Homology CDS 3936651 3936764 . + 0 ID=cds-WP_004219504.1;Parent=gene-NLI98_RS19095;Dbxref=Genbank:WP_004219504.1;Name=WP_004219504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225523.1;locus_tag=NLI98_RS19095;product=hypothetical protein;protein_id=WP_004219504.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3936741 3939155 . - . ID=gene-NLI98_RS19100;Name=NLI98_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19100;old_locus_tag=NLI98_19095 NZ_CP100601.1 Protein Homology CDS 3936741 3939155 . - 0 ID=cds-WP_004178779.1;Parent=gene-NLI98_RS19100;Dbxref=Genbank:WP_004178779.1;Name=WP_004178779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225522.1;locus_tag=NLI98_RS19100;product=ABC transporter permease;protein_id=WP_004178779.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3939152 3939838 . - . ID=gene-NLI98_RS19105;Name=NLI98_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19105;old_locus_tag=NLI98_19100 NZ_CP100601.1 Protein Homology CDS 3939152 3939838 . - 0 ID=cds-WP_032422188.1;Parent=gene-NLI98_RS19105;Dbxref=Genbank:WP_032422188.1;Name=WP_032422188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225521.1;locus_tag=NLI98_RS19105;product=ABC transporter ATP-binding protein;protein_id=WP_032422188.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3939809 3940432 . + . ID=gene-NLI98_RS19110;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=NLI98_RS19110;old_locus_tag=NLI98_19105 NZ_CP100601.1 Protein Homology CDS 3939809 3940432 . + 0 ID=cds-WP_004196998.1;Parent=gene-NLI98_RS19110;Dbxref=Genbank:WP_004196998.1;Name=WP_004196998.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225520.1;locus_tag=NLI98_RS19110;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_004196998.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3940422 3941231 . + . ID=gene-NLI98_RS19115;Name=NLI98_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19115;old_locus_tag=NLI98_19110 NZ_CP100601.1 Protein Homology CDS 3940422 3941231 . + 0 ID=cds-WP_072157841.1;Parent=gene-NLI98_RS19115;Dbxref=Genbank:WP_072157841.1;Name=WP_072157841.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225519.1;locus_tag=NLI98_RS19115;product=SDR family oxidoreductase;protein_id=WP_072157841.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3941290 3942144 . + . ID=gene-NLI98_RS19120;Name=NLI98_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19120;old_locus_tag=NLI98_19115 NZ_CP100601.1 Protein Homology CDS 3941290 3942144 . + 0 ID=cds-WP_002892263.1;Parent=gene-NLI98_RS19120;Dbxref=Genbank:WP_002892263.1;Name=WP_002892263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225518.1;locus_tag=NLI98_RS19120;product=co-chaperone YbbN;protein_id=WP_002892263.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3942251 3943033 . - . ID=gene-NLI98_RS19125;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=NLI98_RS19125;old_locus_tag=NLI98_19120 NZ_CP100601.1 Protein Homology CDS 3942251 3943033 . - 0 ID=cds-WP_004177223.1;Parent=gene-NLI98_RS19125;Dbxref=Genbank:WP_004177223.1;Name=WP_004177223.1;gbkey=CDS;gene=fetB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225517.1;locus_tag=NLI98_RS19125;product=iron export ABC transporter permease subunit FetB;protein_id=WP_004177223.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3943020 3943697 . - . ID=gene-NLI98_RS19130;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;locus_tag=NLI98_RS19130;old_locus_tag=NLI98_19125 NZ_CP100601.1 Protein Homology CDS 3943020 3943697 . - 0 ID=cds-WP_004177224.1;Parent=gene-NLI98_RS19130;Dbxref=Genbank:WP_004177224.1;Name=WP_004177224.1;gbkey=CDS;gene=fetA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225516.1;locus_tag=NLI98_RS19130;product=iron ABC transporter ATP-binding protein FetA;protein_id=WP_004177224.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3943838 3944755 . + . ID=gene-NLI98_RS19135;Name=NLI98_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19135;old_locus_tag=NLI98_19130 NZ_CP100601.1 Protein Homology CDS 3943838 3944755 . + 0 ID=cds-WP_088498361.1;Parent=gene-NLI98_RS19135;Dbxref=Genbank:WP_088498361.1;Name=WP_088498361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225515.1;locus_tag=NLI98_RS19135;product=SPFH/Band 7/PHB domain protein;protein_id=WP_088498361.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3944752 3945210 . + . ID=gene-NLI98_RS19140;Name=NLI98_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19140;old_locus_tag=NLI98_19135 NZ_CP100601.1 Protein Homology CDS 3944752 3945210 . + 0 ID=cds-WP_004142979.1;Parent=gene-NLI98_RS19140;Dbxref=Genbank:WP_004142979.1;Name=WP_004142979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225514.1;locus_tag=NLI98_RS19140;product=NfeD family protein;protein_id=WP_004142979.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3945207 3945617 . - . ID=gene-NLI98_RS19145;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=NLI98_RS19145;old_locus_tag=NLI98_19140 NZ_CP100601.1 Protein Homology CDS 3945207 3945617 . - 0 ID=cds-WP_004142976.1;Parent=gene-NLI98_RS19145;Dbxref=Genbank:WP_004142976.1;Name=WP_004142976.1;gbkey=CDS;gene=cueR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004142976.1;locus_tag=NLI98_RS19145;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_004142976.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3945724 3948225 . + . ID=gene-NLI98_RS19150;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=NLI98_RS19150;old_locus_tag=NLI98_19145 NZ_CP100601.1 Protein Homology CDS 3945724 3948225 . + 0 ID=cds-WP_088498363.1;Parent=gene-NLI98_RS19150;Dbxref=Genbank:WP_088498363.1;Name=WP_088498363.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled cation transmembrane transporter activity|0019829||IEA;go_process=cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151326.1;locus_tag=NLI98_RS19150;product=copper-exporting P-type ATPase CopA;protein_id=WP_088498363.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3948357 3949151 . + . ID=gene-NLI98_RS19155;Name=NLI98_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19155;old_locus_tag=NLI98_19150 NZ_CP100601.1 Protein Homology CDS 3948357 3949151 . + 0 ID=cds-WP_004151327.1;Parent=gene-NLI98_RS19155;Dbxref=Genbank:WP_004151327.1;Name=WP_004151327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225511.1;locus_tag=NLI98_RS19155;product=TraB/GumN family protein;protein_id=WP_004151327.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3949354 3949833 . + . ID=gene-NLI98_RS19160;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=NLI98_RS19160;old_locus_tag=NLI98_19155 NZ_CP100601.1 Protein Homology CDS 3949354 3949833 . + 0 ID=cds-WP_002892205.1;Parent=gene-NLI98_RS19160;Dbxref=Genbank:WP_002892205.1;Name=WP_002892205.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818871.1;locus_tag=NLI98_RS19160;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_002892205.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3949939 3951591 . - . ID=gene-NLI98_RS19165;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=NLI98_RS19165;old_locus_tag=NLI98_19160 NZ_CP100601.1 Protein Homology CDS 3949939 3951591 . - 0 ID=cds-WP_002892203.1;Parent=gene-NLI98_RS19165;Dbxref=Genbank:WP_002892203.1;Name=WP_002892203.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225509.1;locus_tag=NLI98_RS19165;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_002892203.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3951861 3953081 . + . ID=gene-NLI98_RS19170;Name=NLI98_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19170;old_locus_tag=NLI98_19165 NZ_CP100601.1 Protein Homology CDS 3951861 3953081 . + 0 ID=cds-WP_004147385.1;Parent=gene-NLI98_RS19170;Dbxref=Genbank:WP_004147385.1;Name=WP_004147385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225508.1;locus_tag=NLI98_RS19170;product=MFS transporter;protein_id=WP_004147385.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3953307 3954983 . + . ID=gene-NLI98_RS19175;Name=NLI98_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19175;old_locus_tag=NLI98_19170 NZ_CP100601.1 Protein Homology CDS 3953307 3954983 . + 0 ID=cds-WP_088498362.1;Parent=gene-NLI98_RS19175;Dbxref=Genbank:WP_088498362.1;Name=WP_088498362.1;Ontology_term=GO:0006813,GO:0008324,GO:0015299,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cation transmembrane transporter activity|0008324||IEA,solute:proton antiporter activity|0015299||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225505.1;locus_tag=NLI98_RS19175;product=Kef family K(+) transporter;protein_id=WP_088498362.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3955019 3956323 . - . ID=gene-NLI98_RS19180;Name=NLI98_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19180;old_locus_tag=NLI98_19175 NZ_CP100601.1 Protein Homology CDS 3955019 3956323 . - 0 ID=cds-WP_002892192.1;Parent=gene-NLI98_RS19180;Dbxref=Genbank:WP_002892192.1;Name=WP_002892192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225504.1;locus_tag=NLI98_RS19180;product=inosine/guanosine kinase;protein_id=WP_002892192.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3956387 3957349 . - . ID=gene-NLI98_RS19185;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=NLI98_RS19185;old_locus_tag=NLI98_19180 NZ_CP100601.1 Protein Homology CDS 3956387 3957349 . - 0 ID=cds-WP_002892189.1;Parent=gene-NLI98_RS19185;Dbxref=Genbank:WP_002892189.1;Name=WP_002892189.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225503.1;locus_tag=NLI98_RS19185;product=ferrochelatase;protein_id=WP_002892189.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3957478 3958122 . - . ID=gene-NLI98_RS19190;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=NLI98_RS19190;old_locus_tag=NLI98_19185 NZ_CP100601.1 Protein Homology CDS 3957478 3958122 . - 0 ID=cds-WP_002892184.1;Parent=gene-NLI98_RS19190;Dbxref=Genbank:WP_002892184.1;Name=WP_002892184.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007706188.1;locus_tag=NLI98_RS19190;product=adenylate kinase;protein_id=WP_002892184.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3958345 3960219 . - . ID=gene-NLI98_RS19195;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=NLI98_RS19195;old_locus_tag=NLI98_19190 NZ_CP100601.1 Protein Homology CDS 3958345 3960219 . - 0 ID=cds-WP_002892181.1;Parent=gene-NLI98_RS19195;Dbxref=Genbank:WP_002892181.1;Name=WP_002892181.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225501.1;locus_tag=NLI98_RS19195;product=molecular chaperone HtpG;protein_id=WP_002892181.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3960331 3960936 . - . ID=gene-NLI98_RS19200;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=NLI98_RS19200;old_locus_tag=NLI98_19195 NZ_CP100601.1 Protein Homology CDS 3960331 3960936 . - 0 ID=cds-WP_002892177.1;Parent=gene-NLI98_RS19200;Dbxref=Genbank:WP_002892177.1;Name=WP_002892177.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225500.1;locus_tag=NLI98_RS19200;product=recombination mediator RecR;protein_id=WP_002892177.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3960936 3961268 . - . ID=gene-NLI98_RS19205;Name=NLI98_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19205;old_locus_tag=NLI98_19200 NZ_CP100601.1 Protein Homology CDS 3960936 3961268 . - 0 ID=cds-WP_002892173.1;Parent=gene-NLI98_RS19205;Dbxref=Genbank:WP_002892173.1;Name=WP_002892173.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=NLI98_RS19205;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_002892173.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3961326 3963233 . - . ID=gene-NLI98_RS19210;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=NLI98_RS19210;old_locus_tag=NLI98_19205 NZ_CP100601.1 Protein Homology CDS 3961326 3963233 . - 0 ID=cds-WP_004177229.1;Parent=gene-NLI98_RS19210;Dbxref=Genbank:WP_004177229.1;Name=WP_004177229.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459479.1;locus_tag=NLI98_RS19210;product=DNA polymerase III subunit gamma/tau;protein_id=WP_004177229.1;transl_table=11 NZ_CP100601.1 cmsearch sequence_feature 3961929 3961993 . - . ID=id-NLI98_RS19210;Dbxref=RFAM:RF00382;Note=DnaX frameshifting element;gbkey=misc_feature;gene=dnaX;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS19210 NZ_CP100601.1 RefSeq gene 3963326 3963877 . - . ID=gene-NLI98_RS19215;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=NLI98_RS19215;old_locus_tag=NLI98_19210 NZ_CP100601.1 Protein Homology CDS 3963326 3963877 . - 0 ID=cds-WP_004177230.1;Parent=gene-NLI98_RS19215;Dbxref=Genbank:WP_004177230.1;Name=WP_004177230.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125198.1;locus_tag=NLI98_RS19215;product=adenine phosphoribosyltransferase;protein_id=WP_004177230.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3964028 3964405 . - . ID=gene-NLI98_RS19220;Name=NLI98_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19220;old_locus_tag=NLI98_19215 NZ_CP100601.1 Protein Homology CDS 3964028 3964405 . - 0 ID=cds-WP_002892144.1;Parent=gene-NLI98_RS19220;Dbxref=Genbank:WP_002892144.1;Name=WP_002892144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225495.1;locus_tag=NLI98_RS19220;product=DUF454 family protein;protein_id=WP_002892144.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3964475 3965002 . + . ID=gene-NLI98_RS19225;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=NLI98_RS19225;old_locus_tag=NLI98_19220 NZ_CP100601.1 Protein Homology CDS 3964475 3965002 . + 0 ID=cds-WP_002892142.1;Parent=gene-NLI98_RS19225;Dbxref=Genbank:WP_002892142.1;Name=WP_002892142.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225494.1;locus_tag=NLI98_RS19225;product=primosomal replication protein N'';protein_id=WP_002892142.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3965015 3965188 . + . ID=gene-NLI98_RS19230;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=NLI98_RS19230;old_locus_tag=NLI98_19225 NZ_CP100601.1 Protein Homology CDS 3965015 3965188 . + 0 ID=cds-WP_002892136.1;Parent=gene-NLI98_RS19230;Dbxref=Genbank:WP_002892136.1;Name=WP_002892136.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225493.1;locus_tag=NLI98_RS19230;product=pleiotropic regulatory protein RsmS;protein_id=WP_002892136.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3965256 3966167 . + . ID=gene-NLI98_RS19235;Name=NLI98_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19235;old_locus_tag=NLI98_19230 NZ_CP100601.1 Protein Homology CDS 3965256 3966167 . + 0 ID=cds-WP_088498525.1;Parent=gene-NLI98_RS19235;Dbxref=Genbank:WP_088498525.1;Name=WP_088498525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225492.1;locus_tag=NLI98_RS19235;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_088498525.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3966203 3969550 . - . ID=gene-NLI98_RS19240;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=NLI98_RS19240;old_locus_tag=NLI98_19235 NZ_CP100601.1 Protein Homology CDS 3966203 3969550 . - 0 ID=cds-WP_004177234.1;Parent=gene-NLI98_RS19240;Dbxref=Genbank:WP_004177234.1;Name=WP_004177234.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225491.1;locus_tag=NLI98_RS19240;product=mechanosensitive channel MscK;protein_id=WP_004177234.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3969680 3970330 . - . ID=gene-NLI98_RS19245;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=NLI98_RS19245;old_locus_tag=NLI98_19240 NZ_CP100601.1 Protein Homology CDS 3969680 3970330 . - 0 ID=cds-WP_002892080.1;Parent=gene-NLI98_RS19245;Dbxref=Genbank:WP_002892080.1;Name=WP_002892080.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225490.1;locus_tag=NLI98_RS19245;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_002892080.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3970473 3971666 . + . ID=gene-NLI98_RS19250;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=NLI98_RS19250;old_locus_tag=NLI98_19245 NZ_CP100601.1 Protein Homology CDS 3970473 3971666 . + 0 ID=cds-WP_004177236.1;Parent=gene-NLI98_RS19250;Dbxref=Genbank:WP_004177236.1;Name=WP_004177236.1;gbkey=CDS;gene=acrA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225489.1;locus_tag=NLI98_RS19250;product=multidrug efflux RND transporter periplasmic adaptor subunit AcrA;protein_id=WP_004177236.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3971689 3974835 . + . ID=gene-NLI98_RS19255;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=NLI98_RS19255;old_locus_tag=NLI98_19250 NZ_CP100601.1 Protein Homology CDS 3971689 3974835 . + 0 ID=cds-WP_002892069.1;Parent=gene-NLI98_RS19255;Dbxref=Genbank:WP_002892069.1;Name=WP_002892069.1;gbkey=CDS;gene=acrB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225488.1;locus_tag=NLI98_RS19255;product=multidrug efflux RND transporter permease subunit AcrB;protein_id=WP_002892069.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3975321 3975695 . + . ID=gene-NLI98_RS19260;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=NLI98_RS19260;old_locus_tag=NLI98_19255 NZ_CP100601.1 Protein Homology CDS 3975321 3975695 . + 0 ID=cds-WP_002892066.1;Parent=gene-NLI98_RS19260;Dbxref=Genbank:WP_002892066.1;Name=WP_002892066.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225487.1;locus_tag=NLI98_RS19260;product=Hha toxicity modulator TomB;protein_id=WP_002892066.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3975722 3975940 . + . ID=gene-NLI98_RS19265;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=NLI98_RS19265;old_locus_tag=NLI98_19260 NZ_CP100601.1 Protein Homology CDS 3975722 3975940 . + 0 ID=cds-WP_002892050.1;Parent=gene-NLI98_RS19265;Dbxref=Genbank:WP_002892050.1;Name=WP_002892050.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225486.1;locus_tag=NLI98_RS19265;product=hemolysin expression modulator Hha;protein_id=WP_002892050.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3976099 3976665 . + . ID=gene-NLI98_RS19270;Name=maa;gbkey=Gene;gene=maa;gene_biotype=protein_coding;locus_tag=NLI98_RS19270;old_locus_tag=NLI98_19265 NZ_CP100601.1 Protein Homology CDS 3976099 3976665 . + 0 ID=cds-WP_002892030.1;Parent=gene-NLI98_RS19270;Dbxref=Genbank:WP_002892030.1;Name=WP_002892030.1;Ontology_term=GO:0016407;gbkey=CDS;gene=maa;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225485.1;locus_tag=NLI98_RS19270;product=maltose O-acetyltransferase;protein_id=WP_002892030.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3976637 3976777 . - . ID=gene-NLI98_RS19275;Name=NLI98_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19275;old_locus_tag=NLI98_19270 NZ_CP100601.1 Protein Homology CDS 3976637 3976777 . - 0 ID=cds-WP_004147370.1;Parent=gene-NLI98_RS19275;Dbxref=Genbank:WP_004147370.1;Name=WP_004147370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225484.1;locus_tag=NLI98_RS19275;product=hypothetical protein;protein_id=WP_004147370.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3976798 3977268 . + . ID=gene-NLI98_RS19280;Name=NLI98_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19280;old_locus_tag=NLI98_19275 NZ_CP100601.1 Protein Homology CDS 3976798 3977268 . + 0 ID=cds-WP_002892026.1;Parent=gene-NLI98_RS19280;Dbxref=Genbank:WP_002892026.1;Name=WP_002892026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225483.1;locus_tag=NLI98_RS19280;product=YlaC family protein;protein_id=WP_002892026.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3977243 3978694 . - . ID=gene-NLI98_RS19285;Name=NLI98_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19285;old_locus_tag=NLI98_19280 NZ_CP100601.1 Protein Homology CDS 3977243 3978694 . - 0 ID=cds-WP_002892023.1;Parent=gene-NLI98_RS19285;Dbxref=Genbank:WP_002892023.1;Name=WP_002892023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225482.1;locus_tag=NLI98_RS19285;product=PLP-dependent aminotransferase family protein;protein_id=WP_002892023.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3978795 3979493 . + . ID=gene-NLI98_RS19290;Name=NLI98_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19290;old_locus_tag=NLI98_19285 NZ_CP100601.1 Protein Homology CDS 3978795 3979493 . + 0 ID=cds-WP_002892021.1;Parent=gene-NLI98_RS19290;Dbxref=Genbank:WP_002892021.1;Name=WP_002892021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225481.1;locus_tag=NLI98_RS19290;product=GNAT family N-acetyltransferase;protein_id=WP_002892021.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3979490 3979630 . - . ID=gene-NLI98_RS19295;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=NLI98_RS19295;old_locus_tag=NLI98_19290 NZ_CP100601.1 Protein Homology CDS 3979490 3979630 . - 0 ID=cds-WP_002892018.1;Parent=gene-NLI98_RS19295;Dbxref=Genbank:WP_002892018.1;Name=WP_002892018.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459465.1;locus_tag=NLI98_RS19295;product=type B 50S ribosomal protein L36;protein_id=WP_002892018.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3979630 3979893 . - . ID=gene-NLI98_RS19300;Name=NLI98_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19300;old_locus_tag=NLI98_19295 NZ_CP100601.1 Protein Homology CDS 3979630 3979893 . - 0 ID=cds-WP_002892011.1;Parent=gene-NLI98_RS19300;Dbxref=Genbank:WP_002892011.1;Name=WP_002892011.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225479.1;locus_tag=NLI98_RS19300;product=type B 50S ribosomal protein L31;protein_id=WP_002892011.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3980009 3981079 . - . ID=gene-NLI98_RS19305;Name=NLI98_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19305;old_locus_tag=NLI98_19300 NZ_CP100601.1 Protein Homology CDS 3980009 3981079 . - 0 ID=cds-WP_004177239.1;Parent=gene-NLI98_RS19305;Dbxref=Genbank:WP_004177239.1;Name=WP_004177239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225478.1;locus_tag=NLI98_RS19305;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_004177239.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3981350 3982621 . + . ID=gene-NLI98_RS19310;Name=NLI98_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19310;old_locus_tag=NLI98_19305 NZ_CP100601.1 Protein Homology CDS 3981350 3982621 . + 0 ID=cds-WP_004177240.1;Parent=gene-NLI98_RS19310;Dbxref=Genbank:WP_004177240.1;Name=WP_004177240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004177240.1;locus_tag=NLI98_RS19310;product=maltoporin;protein_id=WP_004177240.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3982758 3983072 . - . ID=gene-NLI98_RS19315;Name=NLI98_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19315;old_locus_tag=NLI98_19310 NZ_CP100601.1 Protein Homology CDS 3982758 3983072 . - 0 ID=cds-WP_002892003.1;Parent=gene-NLI98_RS19315;Dbxref=Genbank:WP_002892003.1;Name=WP_002892003.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225475.1;locus_tag=NLI98_RS19315;product=glucose PTS transporter subunit EIIB;protein_id=WP_002892003.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3983137 3985194 . - . ID=gene-NLI98_RS19320;Name=NLI98_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19320;old_locus_tag=NLI98_19315 NZ_CP100601.1 Protein Homology CDS 3983137 3985194 . - 0 ID=cds-WP_004183202.1;Parent=gene-NLI98_RS19320;Dbxref=Genbank:WP_004183202.1;Name=WP_004183202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225474.1;locus_tag=NLI98_RS19320;product=beta-galactosidase;protein_id=WP_004183202.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3985226 3986428 . - . ID=gene-NLI98_RS19325;Name=NLI98_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19325;old_locus_tag=NLI98_19320 NZ_CP100601.1 Protein Homology CDS 3985226 3986428 . - 0 ID=cds-WP_009307952.1;Parent=gene-NLI98_RS19325;Dbxref=Genbank:WP_009307952.1;Name=WP_009307952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225473.1;locus_tag=NLI98_RS19325;product=arabinogalactan endo-beta-1%2C4-galactanase;protein_id=WP_009307952.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3986433 3987284 . - . ID=gene-NLI98_RS19330;Name=NLI98_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19330;old_locus_tag=NLI98_19325 NZ_CP100601.1 Protein Homology CDS 3986433 3987284 . - 0 ID=cds-WP_004204761.1;Parent=gene-NLI98_RS19330;Dbxref=Genbank:WP_004204761.1;Name=WP_004204761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225472.1;locus_tag=NLI98_RS19330;product=sugar ABC transporter permease;protein_id=WP_004204761.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3987295 3988602 . - . ID=gene-NLI98_RS19335;Name=NLI98_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19335;old_locus_tag=NLI98_19330 NZ_CP100601.1 Protein Homology CDS 3987295 3988602 . - 0 ID=cds-WP_004177243.1;Parent=gene-NLI98_RS19335;Dbxref=Genbank:WP_004177243.1;Name=WP_004177243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225471.1;locus_tag=NLI98_RS19335;product=sugar ABC transporter permease;protein_id=WP_004177243.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3988665 3989897 . - . ID=gene-NLI98_RS19340;Name=NLI98_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19340;old_locus_tag=NLI98_19335 NZ_CP100601.1 Protein Homology CDS 3988665 3989897 . - 0 ID=cds-WP_004893835.1;Parent=gene-NLI98_RS19340;Dbxref=Genbank:WP_004893835.1;Name=WP_004893835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225470.1;locus_tag=NLI98_RS19340;product=maltodextrin ABC transporter substrate-binding protein;protein_id=WP_004893835.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3990254 3991363 . + . ID=gene-NLI98_RS19345;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=NLI98_RS19345;old_locus_tag=NLI98_19340 NZ_CP100601.1 Protein Homology CDS 3990254 3991363 . + 0 ID=cds-WP_004178760.1;Parent=gene-NLI98_RS19345;Dbxref=Genbank:WP_004178760.1;Name=WP_004178760.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016243364.1;locus_tag=NLI98_RS19345;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_004178760.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3991597 3993156 . + . ID=gene-NLI98_RS19350;Name=NLI98_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19350;old_locus_tag=NLI98_19345 NZ_CP100601.1 Protein Homology CDS 3991597 3993156 . + 0 ID=cds-WP_004142709.1;Parent=gene-NLI98_RS19350;Dbxref=Genbank:WP_004142709.1;Name=WP_004142709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002891987.1;locus_tag=NLI98_RS19350;product=EAL domain-containing protein;protein_id=WP_004142709.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3993191 3993463 . - . ID=gene-NLI98_RS19355;Name=NLI98_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19355;old_locus_tag=NLI98_19350 NZ_CP100601.1 Protein Homology CDS 3993191 3993463 . - 0 ID=cds-WP_029505503.1;Parent=gene-NLI98_RS19355;Dbxref=Genbank:WP_029505503.1;Name=WP_029505503.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123385.1;locus_tag=NLI98_RS19355;product=metal-sensing transcriptional repressor;protein_id=WP_029505503.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3993628 3994491 . + . ID=gene-NLI98_RS19360;Name=NLI98_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19360;old_locus_tag=NLI98_19355 NZ_CP100601.1 Protein Homology CDS 3993628 3994491 . + 0 ID=cds-WP_038432025.1;Parent=gene-NLI98_RS19360;Dbxref=Genbank:WP_038432025.1;Name=WP_038432025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225465.1;locus_tag=NLI98_RS19360;product=nickel/cobalt efflux protein RcnA;protein_id=WP_038432025.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3994536 3995150 . - . ID=gene-NLI98_RS19365;Name=NLI98_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19365;old_locus_tag=NLI98_19360 NZ_CP100601.1 Protein Homology CDS 3994536 3995150 . - 0 ID=cds-WP_004177248.1;Parent=gene-NLI98_RS19365;Dbxref=Genbank:WP_004177248.1;Name=WP_004177248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225464.1;locus_tag=NLI98_RS19365;product=membrane protein;protein_id=WP_004177248.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3995239 3996666 . + . ID=gene-NLI98_RS19370;Name=NLI98_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19370;old_locus_tag=NLI98_19365 NZ_CP100601.1 Protein Homology CDS 3995239 3996666 . + 0 ID=cds-WP_088498524.1;Parent=gene-NLI98_RS19370;Dbxref=Genbank:WP_088498524.1;Name=WP_088498524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225463.1;locus_tag=NLI98_RS19370;product=PLP-dependent aminotransferase family protein;protein_id=WP_088498524.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3996801 3997016 . - . ID=gene-NLI98_RS19375;Name=NLI98_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19375;old_locus_tag=NLI98_19370 NZ_CP100601.1 Protein Homology CDS 3996801 3997016 . - 0 ID=cds-WP_004142688.1;Parent=gene-NLI98_RS19375;Dbxref=Genbank:WP_004142688.1;Name=WP_004142688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225462.1;locus_tag=NLI98_RS19375;product=hypothetical protein;protein_id=WP_004142688.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3997013 3997270 . - . ID=gene-NLI98_RS19380;Name=NLI98_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19380;old_locus_tag=NLI98_19375 NZ_CP100601.1 Protein Homology CDS 3997013 3997270 . - 0 ID=cds-WP_002891977.1;Parent=gene-NLI98_RS19380;Dbxref=Genbank:WP_002891977.1;Name=WP_002891977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225461.1;locus_tag=NLI98_RS19380;product=hypothetical protein;protein_id=WP_002891977.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3997580 3997676 . - . ID=gene-NLI98_RS19385;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=NLI98_RS19385;old_locus_tag=NLI98_19380 NZ_CP100601.1 cmsearch SRP_RNA 3997580 3997676 . - . ID=rna-NLI98_RS19385;Parent=gene-NLI98_RS19385;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS19385;product=signal recognition particle sRNA small type NZ_CP100601.1 cmsearch exon 3997580 3997676 . - . ID=exon-NLI98_RS19385-1;Parent=rna-NLI98_RS19385;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS19385;product=signal recognition particle sRNA small type NZ_CP100601.1 RefSeq gene 3997917 3998324 . + . ID=gene-NLI98_RS19390;Name=NLI98_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19390;old_locus_tag=NLI98_19385 NZ_CP100601.1 Protein Homology CDS 3997917 3998324 . + 0 ID=cds-WP_088498523.1;Parent=gene-NLI98_RS19390;Dbxref=Genbank:WP_088498523.1;Name=WP_088498523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225460.1;locus_tag=NLI98_RS19390;product=dTDP-glucose pyrophosphorylase;protein_id=WP_088498523.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3998392 3998703 . + . ID=gene-NLI98_RS19395;Name=NLI98_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19395;old_locus_tag=NLI98_19390 NZ_CP100601.1 Protein Homology CDS 3998392 3998703 . + 0 ID=cds-WP_004142687.1;Parent=gene-NLI98_RS19395;Dbxref=Genbank:WP_004142687.1;Name=WP_004142687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225459.1;locus_tag=NLI98_RS19395;product=MGMT family protein;protein_id=WP_004142687.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3998741 3999232 . - . ID=gene-NLI98_RS19400;Name=NLI98_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19400;old_locus_tag=NLI98_19395 NZ_CP100601.1 Protein Homology CDS 3998741 3999232 . - 0 ID=cds-WP_032445629.1;Parent=gene-NLI98_RS19400;Dbxref=Genbank:WP_032445629.1;Name=WP_032445629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225458.1;locus_tag=NLI98_RS19400;product=YbaY family lipoprotein;protein_id=WP_032445629.1;transl_table=11 NZ_CP100601.1 RefSeq gene 3999449 4000312 . + . ID=gene-NLI98_RS19405;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=NLI98_RS19405;old_locus_tag=NLI98_19400 NZ_CP100601.1 Protein Homology CDS 3999449 4000312 . + 0 ID=cds-WP_002891899.1;Parent=gene-NLI98_RS19405;Dbxref=Genbank:WP_002891899.1;Name=WP_002891899.1;gbkey=CDS;gene=tesB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225457.1;locus_tag=NLI98_RS19405;product=acyl-CoA thioesterase II;protein_id=WP_002891899.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4000367 4001653 . - . ID=gene-NLI98_RS19410;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=NLI98_RS19410;old_locus_tag=NLI98_19405 NZ_CP100601.1 Protein Homology CDS 4000367 4001653 . - 0 ID=cds-WP_004152876.1;Parent=gene-NLI98_RS19410;Dbxref=Genbank:WP_004152876.1;Name=WP_004152876.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium transmembrane transporter activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225456.1;locus_tag=NLI98_RS19410;product=ammonium transporter AmtB;protein_id=WP_004152876.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4001687 4002025 . - . ID=gene-NLI98_RS19415;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=NLI98_RS19415;old_locus_tag=NLI98_19410 NZ_CP100601.1 Protein Homology CDS 4001687 4002025 . - 0 ID=cds-WP_002891893.1;Parent=gene-NLI98_RS19415;Dbxref=Genbank:WP_002891893.1;Name=WP_002891893.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225455.1;locus_tag=NLI98_RS19415;product=P-II family nitrogen regulator;protein_id=WP_002891893.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4002269 4004047 . - . ID=gene-NLI98_RS19420;Name=NLI98_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19420;old_locus_tag=NLI98_19415 NZ_CP100601.1 Protein Homology CDS 4002269 4004047 . - 0 ID=cds-WP_004147345.1;Parent=gene-NLI98_RS19420;Dbxref=Genbank:WP_004147345.1;Name=WP_004147345.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225454.1;locus_tag=NLI98_RS19420;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_004147345.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4004040 4005812 . - . ID=gene-NLI98_RS19425;Name=NLI98_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19425;old_locus_tag=NLI98_19420 NZ_CP100601.1 Protein Homology CDS 4004040 4005812 . - 0 ID=cds-WP_004147344.1;Parent=gene-NLI98_RS19425;Dbxref=Genbank:WP_004147344.1;Name=WP_004147344.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225453.1;locus_tag=NLI98_RS19425;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_004147344.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4005856 4006314 . - . ID=gene-NLI98_RS19430;Name=NLI98_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19430;old_locus_tag=NLI98_19425 NZ_CP100601.1 Protein Homology CDS 4005856 4006314 . - 0 ID=cds-WP_002891873.1;Parent=gene-NLI98_RS19430;Dbxref=Genbank:WP_002891873.1;Name=WP_002891873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225452.1;locus_tag=NLI98_RS19430;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_002891873.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4006430 4007482 . + . ID=gene-NLI98_RS19435;Name=NLI98_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19435;old_locus_tag=NLI98_19430 NZ_CP100601.1 Protein Homology CDS 4006430 4007482 . + 0 ID=cds-WP_088498522.1;Parent=gene-NLI98_RS19435;Dbxref=Genbank:WP_088498522.1;Name=WP_088498522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225451.1;locus_tag=NLI98_RS19435;product=PLP-dependent cysteine synthase family protein;protein_id=WP_088498522.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4007527 4008345 . - . ID=gene-NLI98_RS19440;Name=cof;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=NLI98_RS19440;old_locus_tag=NLI98_19435 NZ_CP100601.1 Protein Homology CDS 4007527 4008345 . - 0 ID=cds-WP_004151335.1;Parent=gene-NLI98_RS19440;Dbxref=Genbank:WP_004151335.1;Name=WP_004151335.1;Ontology_term=GO:0016818;gbkey=CDS;gene=cof;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225450.1;locus_tag=NLI98_RS19440;product=HMP-PP phosphatase;protein_id=WP_004151335.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4008473 4010173 . + . ID=gene-NLI98_RS19445;Name=NLI98_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19445;old_locus_tag=NLI98_19440 NZ_CP100601.1 Protein Homology CDS 4008473 4010173 . + 0 ID=cds-WP_088498521.1;Parent=gene-NLI98_RS19445;Dbxref=Genbank:WP_088498521.1;Name=WP_088498521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225449.1;locus_tag=NLI98_RS19445;product=SgrR family transcriptional regulator;protein_id=WP_088498521.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4010240 4010941 . + . ID=gene-NLI98_RS19450;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=NLI98_RS19450;old_locus_tag=NLI98_19445 NZ_CP100601.1 Protein Homology CDS 4010240 4010941 . + 0 ID=cds-WP_002891863.1;Parent=gene-NLI98_RS19450;Dbxref=Genbank:WP_002891863.1;Name=WP_002891863.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225448.1;locus_tag=NLI98_RS19450;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_002891863.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4011053 4011454 . - . ID=gene-NLI98_RS19455;Name=NLI98_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19455;old_locus_tag=NLI98_19450 NZ_CP100601.1 Protein Homology CDS 4011053 4011454 . - 0 ID=cds-WP_002891860.1;Parent=gene-NLI98_RS19455;Dbxref=Genbank:WP_002891860.1;Name=WP_002891860.1;Ontology_term=GO:0047617;gbkey=CDS;go_function=acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225447.1;locus_tag=NLI98_RS19455;product=YbgC/FadM family acyl-CoA thioesterase;protein_id=WP_002891860.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4011566 4011934 . - . ID=gene-NLI98_RS19460;Name=NLI98_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19460;old_locus_tag=NLI98_19455 NZ_CP100601.1 Protein Homology CDS 4011566 4011934 . - 0 ID=cds-WP_004144680.1;Parent=gene-NLI98_RS19460;Dbxref=Genbank:WP_004144680.1;Name=WP_004144680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225446.1;locus_tag=NLI98_RS19460;product=helix-hairpin-helix domain-containing protein;protein_id=WP_004144680.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4012083 4013957 . - . ID=gene-NLI98_RS19465;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=NLI98_RS19465;old_locus_tag=NLI98_19460 NZ_CP100601.1 Protein Homology CDS 4012083 4013957 . - 0 ID=cds-WP_004177252.1;Parent=gene-NLI98_RS19465;Dbxref=Genbank:WP_004177252.1;Name=WP_004177252.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225445.1;locus_tag=NLI98_RS19465;product=peptidylprolyl isomerase;protein_id=WP_004177252.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4014172 4014444 . - . ID=gene-NLI98_RS19470;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=NLI98_RS19470;old_locus_tag=NLI98_19465 NZ_CP100601.1 Protein Homology CDS 4014172 4014444 . - 0 ID=cds-WP_002444653.1;Parent=gene-NLI98_RS19470;Dbxref=Genbank:WP_002444653.1;Name=WP_002444653.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535194.1;locus_tag=NLI98_RS19470;product=DNA-binding protein HU-beta;protein_id=WP_002444653.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4014654 4017008 . - . ID=gene-NLI98_RS19475;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=NLI98_RS19475;old_locus_tag=NLI98_19470 NZ_CP100601.1 Protein Homology CDS 4014654 4017008 . - 0 ID=cds-WP_004151336.1;Parent=gene-NLI98_RS19475;Dbxref=Genbank:WP_004151336.1;Name=WP_004151336.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001469947.1;locus_tag=NLI98_RS19475;product=endopeptidase La;protein_id=WP_004151336.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4017192 4018466 . - . ID=gene-NLI98_RS19480;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=NLI98_RS19480;old_locus_tag=NLI98_19475 NZ_CP100601.1 Protein Homology CDS 4017192 4018466 . - 0 ID=cds-WP_002891807.1;Parent=gene-NLI98_RS19480;Dbxref=Genbank:WP_002891807.1;Name=WP_002891807.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0051082,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=NLI98_RS19480;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_002891807.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4018717 4019340 . - . ID=gene-NLI98_RS19485;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=NLI98_RS19485;old_locus_tag=NLI98_19480 NZ_CP100601.1 Protein Homology CDS 4018717 4019340 . - 0 ID=cds-WP_002891804.1;Parent=gene-NLI98_RS19485;Dbxref=Genbank:WP_002891804.1;Name=WP_002891804.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006809880.1;locus_tag=NLI98_RS19485;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_002891804.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4019650 4020948 . - . ID=gene-NLI98_RS19490;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=NLI98_RS19490;old_locus_tag=NLI98_19485 NZ_CP100601.1 Protein Homology CDS 4019650 4020948 . - 0 ID=cds-WP_004147333.1;Parent=gene-NLI98_RS19490;Dbxref=Genbank:WP_004147333.1;Name=WP_004147333.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001716227.1;locus_tag=NLI98_RS19490;product=trigger factor;protein_id=WP_004147333.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4021294 4021611 . - . ID=gene-NLI98_RS19495;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=NLI98_RS19495;old_locus_tag=NLI98_19490 NZ_CP100601.1 Protein Homology CDS 4021294 4021611 . - 0 ID=cds-WP_002891649.1;Parent=gene-NLI98_RS19495;Dbxref=Genbank:WP_002891649.1;Name=WP_002891649.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225437.1;locus_tag=NLI98_RS19495;product=transcriptional regulator BolA;protein_id=WP_002891649.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4021914 4022492 . + . ID=gene-NLI98_RS19500;Name=NLI98_RS19500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19500;old_locus_tag=NLI98_19495 NZ_CP100601.1 Protein Homology CDS 4021914 4022492 . + 0 ID=cds-WP_002891647.1;Parent=gene-NLI98_RS19500;Dbxref=Genbank:WP_002891647.1;Name=WP_002891647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225436.1;locus_tag=NLI98_RS19500;product=lipoprotein;protein_id=WP_002891647.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4022536 4024011 . + . ID=gene-NLI98_RS19505;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=NLI98_RS19505;old_locus_tag=NLI98_19500 NZ_CP100601.1 Protein Homology CDS 4022536 4024011 . + 0 ID=cds-WP_064278526.1;Parent=gene-NLI98_RS19505;Dbxref=Genbank:WP_064278526.1;Name=WP_064278526.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225435.1;locus_tag=NLI98_RS19505;product=muropeptide MFS transporter AmpG;protein_id=WP_064278526.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4024491 4025435 . + . ID=gene-NLI98_RS19510;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=NLI98_RS19510;old_locus_tag=NLI98_19505 NZ_CP100601.1 Protein Homology CDS 4024491 4025435 . + 0 ID=cds-WP_002891641.1;Parent=gene-NLI98_RS19510;Dbxref=Genbank:WP_002891641.1;Name=WP_002891641.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414966.1;locus_tag=NLI98_RS19510;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_002891641.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4025455 4027446 . + . ID=gene-NLI98_RS19515;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=NLI98_RS19515;old_locus_tag=NLI98_19510 NZ_CP100601.1 Protein Homology CDS 4025455 4027446 . + 0 ID=cds-WP_002891638.1;Parent=gene-NLI98_RS19515;Dbxref=Genbank:WP_002891638.1;Name=WP_002891638.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444673.1;locus_tag=NLI98_RS19515;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_002891638.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4027436 4028047 . + . ID=gene-NLI98_RS19520;Name=NLI98_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19520;old_locus_tag=NLI98_19515 NZ_CP100601.1 Protein Homology CDS 4027436 4028047 . + 0 ID=cds-WP_002891635.1;Parent=gene-NLI98_RS19520;Dbxref=Genbank:WP_002891635.1;Name=WP_002891635.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414964.1;locus_tag=NLI98_RS19520;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_002891635.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4028047 4028376 . + . ID=gene-NLI98_RS19525;Name=NLI98_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19525;old_locus_tag=NLI98_19520 NZ_CP100601.1 Protein Homology CDS 4028047 4028376 . + 0 ID=cds-WP_002891634.1;Parent=gene-NLI98_RS19525;Dbxref=Genbank:WP_002891634.1;Name=WP_002891634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225431.1;locus_tag=NLI98_RS19525;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_002891634.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4028388 4029275 . + . ID=gene-NLI98_RS19530;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=NLI98_RS19530;old_locus_tag=NLI98_19525 NZ_CP100601.1 Protein Homology CDS 4028388 4029275 . + 0 ID=cds-WP_002891629.1;Parent=gene-NLI98_RS19530;Dbxref=Genbank:WP_002891629.1;Name=WP_002891629.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225430.1;locus_tag=NLI98_RS19530;product=heme o synthase;protein_id=WP_002891629.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4029524 4029856 . + . ID=gene-NLI98_RS19535;Name=NLI98_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19535;old_locus_tag=NLI98_19530 NZ_CP100601.1 Protein Homology CDS 4029524 4029856 . + 0 ID=cds-WP_004178748.1;Parent=gene-NLI98_RS19535;Dbxref=Genbank:WP_004178748.1;Name=WP_004178748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225429.1;locus_tag=NLI98_RS19535;product=hypothetical protein;protein_id=WP_004178748.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4029896 4030654 . - . ID=gene-NLI98_RS19540;Name=NLI98_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19540;old_locus_tag=NLI98_19535 NZ_CP100601.1 Protein Homology CDS 4029896 4030654 . - 0 ID=cds-WP_002891624.1;Parent=gene-NLI98_RS19540;Dbxref=Genbank:WP_002891624.1;Name=WP_002891624.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225428.1;locus_tag=NLI98_RS19540;product=helix-turn-helix domain-containing protein;protein_id=WP_002891624.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4030807 4031628 . + . ID=gene-NLI98_RS19545;Name=NLI98_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19545;old_locus_tag=NLI98_19540 NZ_CP100601.1 Protein Homology CDS 4030807 4031628 . + 0 ID=cds-WP_023286095.1;Parent=gene-NLI98_RS19545;Dbxref=Genbank:WP_023286095.1;Name=WP_023286095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225427.1;locus_tag=NLI98_RS19545;product=shikimate 5-dehydrogenase;protein_id=WP_023286095.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4031625 4033301 . + . ID=gene-NLI98_RS19550;Name=NLI98_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19550;old_locus_tag=NLI98_19545 NZ_CP100601.1 Protein Homology CDS 4031625 4033301 . + 0 ID=cds-WP_088498519.1;Parent=gene-NLI98_RS19550;Dbxref=Genbank:WP_088498519.1;Name=WP_088498519.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225426.1;locus_tag=NLI98_RS19550;product=FAD-dependent oxidoreductase;protein_id=WP_088498519.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4033315 4033635 . + . ID=gene-NLI98_RS19555;Name=NLI98_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19555;old_locus_tag=NLI98_19550 NZ_CP100601.1 Protein Homology CDS 4033315 4033635 . + 0 ID=cds-WP_002891541.1;Parent=gene-NLI98_RS19555;Dbxref=Genbank:WP_002891541.1;Name=WP_002891541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225425.1;locus_tag=NLI98_RS19555;product=NIPSNAP family protein;protein_id=WP_002891541.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4033646 4035343 . + . ID=gene-NLI98_RS19560;Name=NLI98_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19560;old_locus_tag=NLI98_19555 NZ_CP100601.1 Protein Homology CDS 4033646 4035343 . + 0 ID=cds-WP_088498518.1;Parent=gene-NLI98_RS19560;Dbxref=Genbank:WP_088498518.1;Name=WP_088498518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225424.1;locus_tag=NLI98_RS19560;product=FAD-dependent oxidoreductase;protein_id=WP_088498518.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4035401 4036219 . + . ID=gene-NLI98_RS19565;Name=NLI98_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19565;old_locus_tag=NLI98_19560 NZ_CP100601.1 Protein Homology CDS 4035401 4036219 . + 0 ID=cds-WP_002891476.1;Parent=gene-NLI98_RS19565;Dbxref=Genbank:WP_002891476.1;Name=WP_002891476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225423.1;locus_tag=NLI98_RS19565;product=sugar phosphate isomerase/epimerase;protein_id=WP_002891476.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4036230 4037594 . + . ID=gene-NLI98_RS19570;Name=NLI98_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19570;old_locus_tag=NLI98_19565 NZ_CP100601.1 Protein Homology CDS 4036230 4037594 . + 0 ID=cds-WP_049186080.1;Parent=gene-NLI98_RS19570;Dbxref=Genbank:WP_049186080.1;Name=WP_049186080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225422.1;locus_tag=NLI98_RS19570;product=aromatic acid/H+ symport family MFS transporter;protein_id=WP_049186080.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4037926 4039104 . + . ID=gene-NLI98_RS19575;Name=NLI98_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19575;old_locus_tag=NLI98_19570 NZ_CP100601.1 Protein Homology CDS 4037926 4039104 . + 0 ID=cds-WP_004178743.1;Parent=gene-NLI98_RS19575;Dbxref=Genbank:WP_004178743.1;Name=WP_004178743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225421.1;locus_tag=NLI98_RS19575;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_004178743.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4039264 4040628 . + . ID=gene-NLI98_RS19580;Name=NLI98_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19580;old_locus_tag=NLI98_19575 NZ_CP100601.1 Protein Homology CDS 4039264 4040628 . + 0 ID=cds-WP_004144660.1;Parent=gene-NLI98_RS19580;Dbxref=Genbank:WP_004144660.1;Name=WP_004144660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225420.1;locus_tag=NLI98_RS19580;product=MFS transporter;protein_id=WP_004144660.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4040672 4041163 . - . ID=gene-NLI98_RS19585;Name=NLI98_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19585;old_locus_tag=NLI98_19580 NZ_CP100601.1 Protein Homology CDS 4040672 4041163 . - 0 ID=cds-WP_002891465.1;Parent=gene-NLI98_RS19585;Dbxref=Genbank:WP_002891465.1;Name=WP_002891465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225419.1;locus_tag=NLI98_RS19585;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_002891465.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4041355 4042266 . + . ID=gene-NLI98_RS19590;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=NLI98_RS19590;old_locus_tag=NLI98_19585 NZ_CP100601.1 Protein Homology CDS 4041355 4042266 . + 0 ID=cds-WP_004191719.1;Parent=gene-NLI98_RS19590;Dbxref=Genbank:WP_004191719.1;Name=WP_004191719.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225418.1;locus_tag=NLI98_RS19590;product=2-dehydropantoate 2-reductase;protein_id=WP_004191719.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4042229 4042822 . + . ID=gene-NLI98_RS19595;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=NLI98_RS19595;old_locus_tag=NLI98_19590 NZ_CP100601.1 Protein Homology CDS 4042229 4042822 . + 0 ID=cds-WP_020802609.1;Parent=gene-NLI98_RS19595;Dbxref=Genbank:WP_020802609.1;Name=WP_020802609.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225417.1;locus_tag=NLI98_RS19595;product=protein deglycase YajL;protein_id=WP_020802609.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4042873 4043349 . + . ID=gene-NLI98_RS19600;Name=NLI98_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19600;old_locus_tag=NLI98_19595 NZ_CP100601.1 Protein Homology CDS 4042873 4043349 . + 0 ID=cds-WP_088498517.1;Parent=gene-NLI98_RS19600;Dbxref=Genbank:WP_088498517.1;Name=WP_088498517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020316526.1;locus_tag=NLI98_RS19600;product=SRPBCC family protein;protein_id=WP_088498517.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4043416 4044864 . - . ID=gene-NLI98_RS19605;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=NLI98_RS19605;old_locus_tag=NLI98_19600 NZ_CP100601.1 Protein Homology CDS 4043416 4044864 . - 0 ID=cds-WP_004151340.1;Parent=gene-NLI98_RS19605;Dbxref=Genbank:WP_004151340.1;Name=WP_004151340.1;Ontology_term=GO:0006400,GO:0009228,GO:0003824;gbkey=CDS;gene=thiI;go_function=catalytic activity|0003824||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168857.1;locus_tag=NLI98_RS19605;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WP_004151340.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4045046 4045288 . + . ID=gene-NLI98_RS19610;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=NLI98_RS19610;old_locus_tag=NLI98_19605 NZ_CP100601.1 Protein Homology CDS 4045046 4045288 . + 0 ID=cds-WP_002891398.1;Parent=gene-NLI98_RS19610;Dbxref=Genbank:WP_002891398.1;Name=WP_002891398.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225414.1;locus_tag=NLI98_RS19610;product=exodeoxyribonuclease VII small subunit;protein_id=WP_002891398.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4045289 4046188 . + . ID=gene-NLI98_RS19615;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=NLI98_RS19615;old_locus_tag=NLI98_19610 NZ_CP100601.1 Protein Homology CDS 4045289 4046188 . + 0 ID=cds-WP_004144656.1;Parent=gene-NLI98_RS19615;Dbxref=Genbank:WP_004144656.1;Name=WP_004144656.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225413.1;locus_tag=NLI98_RS19615;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_004144656.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4046207 4048069 . + . ID=gene-NLI98_RS19620;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=NLI98_RS19620;old_locus_tag=NLI98_19615 NZ_CP100601.1 Protein Homology CDS 4046207 4048069 . + 0 ID=cds-WP_004144655.1;Parent=gene-NLI98_RS19620;Dbxref=Genbank:WP_004144655.1;Name=WP_004144655.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225412.1;locus_tag=NLI98_RS19620;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_004144655.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4048130 4049104 . + . ID=gene-NLI98_RS19625;Name=NLI98_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19625;old_locus_tag=NLI98_19620 NZ_CP100601.1 Protein Homology CDS 4048130 4049104 . + 0 ID=cds-WP_004147313.1;Parent=gene-NLI98_RS19625;Dbxref=Genbank:WP_004147313.1;Name=WP_004147313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225411.1;locus_tag=NLI98_RS19625;product=aldo/keto reductase;protein_id=WP_004147313.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4049150 4049653 . - . ID=gene-NLI98_RS19630;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=NLI98_RS19630;old_locus_tag=NLI98_19625 NZ_CP100601.1 Protein Homology CDS 4049150 4049653 . - 0 ID=cds-WP_004177266.1;Parent=gene-NLI98_RS19630;Dbxref=Genbank:WP_004177266.1;Name=WP_004177266.1;Ontology_term=GO:0006629,GO:0008962;gbkey=CDS;gene=pgpA;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019725334.1;locus_tag=NLI98_RS19630;product=phosphatidylglycerophosphatase A;protein_id=WP_004177266.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4049646 4050617 . - . ID=gene-NLI98_RS19635;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=NLI98_RS19635;old_locus_tag=NLI98_19630 NZ_CP100601.1 Protein Homology CDS 4049646 4050617 . - 0 ID=cds-WP_004178737.1;Parent=gene-NLI98_RS19635;Dbxref=Genbank:WP_004178737.1;Name=WP_004178737.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225409.1;locus_tag=NLI98_RS19635;product=thiamine-phosphate kinase;protein_id=WP_004178737.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4050689 4051108 . - . ID=gene-NLI98_RS19640;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=NLI98_RS19640;old_locus_tag=NLI98_19635 NZ_CP100601.1 Protein Homology CDS 4050689 4051108 . - 0 ID=cds-WP_002891356.1;Parent=gene-NLI98_RS19640;Dbxref=Genbank:WP_002891356.1;Name=WP_002891356.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225408.1;locus_tag=NLI98_RS19640;product=transcription antitermination factor NusB;protein_id=WP_002891356.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4051128 4051598 . - . ID=gene-NLI98_RS19645;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=NLI98_RS19645;old_locus_tag=NLI98_19640 NZ_CP100601.1 Protein Homology CDS 4051128 4051598 . - 0 ID=cds-WP_001021161.1;Parent=gene-NLI98_RS19645;Dbxref=Genbank:WP_001021161.1;Name=WP_001021161.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818760.1;locus_tag=NLI98_RS19645;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_001021161.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4051686 4052789 . - . ID=gene-NLI98_RS19650;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=NLI98_RS19650;old_locus_tag=NLI98_19645 NZ_CP100601.1 Protein Homology CDS 4051686 4052789 . - 0 ID=cds-WP_088498516.1;Parent=gene-NLI98_RS19650;Dbxref=Genbank:WP_088498516.1;Name=WP_088498516.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225406.1;locus_tag=NLI98_RS19650;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_088498516.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4052793 4053242 . - . ID=gene-NLI98_RS19655;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=NLI98_RS19655;old_locus_tag=NLI98_19650 NZ_CP100601.1 Protein Homology CDS 4052793 4053242 . - 0 ID=cds-WP_002890417.1;Parent=gene-NLI98_RS19655;Dbxref=Genbank:WP_002890417.1;Name=WP_002890417.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=NLI98_RS19655;product=transcriptional regulator NrdR;protein_id=WP_002890417.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4053390 4053929 . + . ID=gene-NLI98_RS19660;Name=NLI98_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19660;old_locus_tag=NLI98_19655 NZ_CP100601.1 Protein Homology CDS 4053390 4053929 . + 0 ID=cds-WP_002890414.1;Parent=gene-NLI98_RS19660;Dbxref=Genbank:WP_002890414.1;Name=WP_002890414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225404.1;locus_tag=NLI98_RS19660;product=DUF3251 domain-containing protein;protein_id=WP_002890414.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4054228 4055112 . + . ID=gene-NLI98_RS19665;Name=NLI98_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19665;old_locus_tag=NLI98_19660 NZ_CP100601.1 Protein Homology CDS 4054228 4055112 . + 0 ID=cds-WP_002890412.1;Parent=gene-NLI98_RS19665;Dbxref=Genbank:WP_002890412.1;Name=WP_002890412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225403.1;locus_tag=NLI98_RS19665;product=nucleoside-specific channel-forming protein Tsx;protein_id=WP_002890412.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4055167 4055862 . - . ID=gene-NLI98_RS19670;Name=NLI98_RS19670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19670;old_locus_tag=NLI98_19665 NZ_CP100601.1 Protein Homology CDS 4055167 4055862 . - 0 ID=cds-WP_004144646.1;Parent=gene-NLI98_RS19670;Dbxref=Genbank:WP_004144646.1;Name=WP_004144646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225402.1;locus_tag=NLI98_RS19670;product=YafY family transcriptional regulator;protein_id=WP_004144646.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4055887 4056252 . - . ID=gene-NLI98_RS19675;Name=NLI98_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19675;old_locus_tag=NLI98_19670 NZ_CP100601.1 Protein Homology CDS 4055887 4056252 . - 0 ID=cds-WP_002890404.1;Parent=gene-NLI98_RS19675;Dbxref=Genbank:WP_002890404.1;Name=WP_002890404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225401.1;locus_tag=NLI98_RS19675;product=VOC family protein;protein_id=WP_002890404.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4056389 4057360 . - . ID=gene-NLI98_RS19680;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=NLI98_RS19680;old_locus_tag=NLI98_19675 NZ_CP100601.1 Protein Homology CDS 4056389 4057360 . - 0 ID=cds-WP_002890403.1;Parent=gene-NLI98_RS19680;Dbxref=Genbank:WP_002890403.1;Name=WP_002890403.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225400.1;locus_tag=NLI98_RS19680;product=protein translocase subunit SecF;protein_id=WP_002890403.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4057371 4059218 . - . ID=gene-NLI98_RS19685;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=NLI98_RS19685;old_locus_tag=NLI98_19680 NZ_CP100601.1 Protein Homology CDS 4057371 4059218 . - 0 ID=cds-WP_002890400.1;Parent=gene-NLI98_RS19685;Dbxref=Genbank:WP_002890400.1;Name=WP_002890400.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=NLI98_RS19685;product=protein translocase subunit SecD;protein_id=WP_002890400.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4059245 4059577 . - . ID=gene-NLI98_RS19690;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=NLI98_RS19690;old_locus_tag=NLI98_19685 NZ_CP100601.1 Protein Homology CDS 4059245 4059577 . - 0 ID=cds-WP_002890398.1;Parent=gene-NLI98_RS19690;Dbxref=Genbank:WP_002890398.1;Name=WP_002890398.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=NLI98_RS19690;product=preprotein translocase subunit YajC;protein_id=WP_002890398.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4059600 4060727 . - . ID=gene-NLI98_RS19695;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=NLI98_RS19695;old_locus_tag=NLI98_19690 NZ_CP100601.1 Protein Homology CDS 4059600 4060727 . - 0 ID=cds-WP_002890395.1;Parent=gene-NLI98_RS19695;Dbxref=Genbank:WP_002890395.1;Name=WP_002890395.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904808.1;locus_tag=NLI98_RS19695;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_002890395.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4060836 4061900 . - . ID=gene-NLI98_RS19700;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=NLI98_RS19700;old_locus_tag=NLI98_19695 NZ_CP100601.1 Protein Homology CDS 4060836 4061900 . - 0 ID=cds-WP_002890390.1;Parent=gene-NLI98_RS19700;Dbxref=Genbank:WP_002890390.1;Name=WP_002890390.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225396.1;locus_tag=NLI98_RS19700;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_002890390.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4061965 4062081 . - . ID=gene-NLI98_RS19705;Name=NLI98_RS19705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19705;old_locus_tag=NLI98_19700 NZ_CP100601.1 Protein Homology CDS 4061965 4062081 . - 0 ID=cds-WP_004218831.1;Parent=gene-NLI98_RS19705;Dbxref=Genbank:WP_004218831.1;Name=WP_004218831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225395.1;locus_tag=NLI98_RS19705;product=hypothetical protein;protein_id=WP_004218831.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4062156 4062737 . + . ID=gene-NLI98_RS19710;Name=acpH;gbkey=Gene;gene=acpH;gene_biotype=protein_coding;locus_tag=NLI98_RS19710;old_locus_tag=NLI98_19705 NZ_CP100601.1 Protein Homology CDS 4062156 4062737 . + 0 ID=cds-WP_009307908.1;Parent=gene-NLI98_RS19710;Dbxref=Genbank:WP_009307908.1;Name=WP_009307908.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;gene=acpH;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225394.1;locus_tag=NLI98_RS19710;product=ACP phosphodiesterase;protein_id=WP_009307908.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4062865 4063467 . + . ID=gene-NLI98_RS19715;Name=NLI98_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19715;old_locus_tag=NLI98_19710 NZ_CP100601.1 Protein Homology CDS 4062865 4063467 . + 0 ID=cds-WP_004178733.1;Parent=gene-NLI98_RS19715;Dbxref=Genbank:WP_004178733.1;Name=WP_004178733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225393.1;locus_tag=NLI98_RS19715;product=peroxiredoxin;protein_id=WP_004178733.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 4063591 4063758 . - . ID=gene-NLI98_RS19720;Name=NLI98_RS19720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS19720;old_locus_tag=NLI98_19715;pseudo=true NZ_CP100601.1 Protein Homology CDS 4063591 4063758 . - 0 ID=cds-NLI98_RS19720;Parent=gene-NLI98_RS19720;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225392.1;locus_tag=NLI98_RS19720;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 4063814 4064257 . + . ID=gene-NLI98_RS19725;Name=NLI98_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19725;old_locus_tag=NLI98_19720 NZ_CP100601.1 Protein Homology CDS 4063814 4064257 . + 0 ID=cds-WP_002890380.1;Parent=gene-NLI98_RS19725;Dbxref=Genbank:WP_002890380.1;Name=WP_002890380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225391.1;locus_tag=NLI98_RS19725;product=PTS sugar transporter subunit IIA;protein_id=WP_002890380.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4064263 4064550 . + . ID=gene-NLI98_RS19730;Name=NLI98_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19730;old_locus_tag=NLI98_19725 NZ_CP100601.1 Protein Homology CDS 4064263 4064550 . + 0 ID=cds-WP_002890376.1;Parent=gene-NLI98_RS19730;Dbxref=Genbank:WP_002890376.1;Name=WP_002890376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225390.1;locus_tag=NLI98_RS19730;product=PTS sugar transporter subunit IIB;protein_id=WP_002890376.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4064571 4065962 . + . ID=gene-NLI98_RS19735;Name=NLI98_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19735;old_locus_tag=NLI98_19730 NZ_CP100601.1 Protein Homology CDS 4064571 4065962 . + 0 ID=cds-WP_004151345.1;Parent=gene-NLI98_RS19735;Dbxref=Genbank:WP_004151345.1;Name=WP_004151345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225389.1;locus_tag=NLI98_RS19735;product=PTS ascorbate transporter subunit IIC;protein_id=WP_004151345.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4066028 4066990 . + . ID=gene-NLI98_RS19740;Name=NLI98_RS19740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19740;old_locus_tag=NLI98_19735 NZ_CP100601.1 Protein Homology CDS 4066028 4066990 . + 0 ID=cds-WP_002890372.1;Parent=gene-NLI98_RS19740;Dbxref=Genbank:WP_002890372.1;Name=WP_002890372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225388.1;locus_tag=NLI98_RS19740;product=PfkB family carbohydrate kinase;protein_id=WP_002890372.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4067026 4067880 . + . ID=gene-NLI98_RS19745;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=NLI98_RS19745;old_locus_tag=NLI98_19740 NZ_CP100601.1 Protein Homology CDS 4067026 4067880 . + 0 ID=cds-WP_004218830.1;Parent=gene-NLI98_RS19745;Dbxref=Genbank:WP_004218830.1;Name=WP_004218830.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;gene=fba;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225387.1;locus_tag=NLI98_RS19745;product=class II fructose-1%2C6-bisphosphate aldolase;protein_id=WP_004218830.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4067939 4069807 . - . ID=gene-NLI98_RS19750;Name=NLI98_RS19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19750;old_locus_tag=NLI98_19745 NZ_CP100601.1 Protein Homology CDS 4067939 4069807 . - 0 ID=cds-WP_002890368.1;Parent=gene-NLI98_RS19750;Dbxref=Genbank:WP_002890368.1;Name=WP_002890368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225386.1;locus_tag=NLI98_RS19750;product=amidohydrolase;protein_id=WP_002890368.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4069832 4070377 . - . ID=gene-NLI98_RS19755;Name=NLI98_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19755;old_locus_tag=NLI98_19750 NZ_CP100601.1 Protein Homology CDS 4069832 4070377 . - 0 ID=cds-WP_002890365.1;Parent=gene-NLI98_RS19755;Dbxref=Genbank:WP_002890365.1;Name=WP_002890365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225385.1;locus_tag=NLI98_RS19755;product=antibiotic biosynthesis monooxygenase;protein_id=WP_002890365.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4070560 4071201 . - . ID=gene-NLI98_RS19760;Name=NLI98_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19760;old_locus_tag=NLI98_19755 NZ_CP100601.1 Protein Homology CDS 4070560 4071201 . - 0 ID=cds-WP_002890357.1;Parent=gene-NLI98_RS19760;Dbxref=Genbank:WP_002890357.1;Name=WP_002890357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225384.1;locus_tag=NLI98_RS19760;product=hydrolase;protein_id=WP_002890357.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4071468 4072370 . + . ID=gene-NLI98_RS19765;Name=NLI98_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19765;old_locus_tag=NLI98_19760 NZ_CP100601.1 Protein Homology CDS 4071468 4072370 . + 0 ID=cds-WP_002890353.1;Parent=gene-NLI98_RS19765;Dbxref=Genbank:WP_002890353.1;Name=WP_002890353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225383.1;locus_tag=NLI98_RS19765;product=LysR substrate-binding domain-containing protein;protein_id=WP_002890353.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4072367 4074184 . - . ID=gene-NLI98_RS19770;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=NLI98_RS19770;old_locus_tag=NLI98_19765 NZ_CP100601.1 Protein Homology CDS 4072367 4074184 . - 0 ID=cds-WP_004147293.1;Parent=gene-NLI98_RS19770;Dbxref=Genbank:WP_004147293.1;Name=WP_004147293.1;Ontology_term=GO:0005975,GO:0004558;gbkey=CDS;gene=malZ;go_function=alpha-1%2C4-glucosidase activity|0004558||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225382.1;locus_tag=NLI98_RS19770;product=maltodextrin glucosidase;protein_id=WP_004147293.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4074336 4075709 . - . ID=gene-NLI98_RS19775;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=NLI98_RS19775;old_locus_tag=NLI98_19770 NZ_CP100601.1 Protein Homology CDS 4074336 4075709 . - 0 ID=cds-WP_002890348.1;Parent=gene-NLI98_RS19775;Dbxref=Genbank:WP_002890348.1;Name=WP_002890348.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=proY;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225381.1;locus_tag=NLI98_RS19775;product=proline-specific permease ProY;protein_id=WP_002890348.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4075796 4077115 . - . ID=gene-NLI98_RS19780;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=NLI98_RS19780;old_locus_tag=NLI98_19775 NZ_CP100601.1 Protein Homology CDS 4075796 4077115 . - 0 ID=cds-WP_004144627.1;Parent=gene-NLI98_RS19780;Dbxref=Genbank:WP_004144627.1;Name=WP_004144627.1;gbkey=CDS;gene=brnQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225380.1;locus_tag=NLI98_RS19780;product=branched-chain amino acid transporter carrier protein BrnQ;protein_id=WP_004144627.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4077529 4078824 . - . ID=gene-NLI98_RS19785;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=NLI98_RS19785;old_locus_tag=NLI98_19780 NZ_CP100601.1 Protein Homology CDS 4077529 4078824 . - 0 ID=cds-WP_002890344.1;Parent=gene-NLI98_RS19785;Dbxref=Genbank:WP_002890344.1;Name=WP_002890344.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225379.1;locus_tag=NLI98_RS19785;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_002890344.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4078846 4079535 . - . ID=gene-NLI98_RS19790;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=NLI98_RS19790;old_locus_tag=NLI98_19785 NZ_CP100601.1 Protein Homology CDS 4078846 4079535 . - 0 ID=cds-WP_002890343.1;Parent=gene-NLI98_RS19790;Dbxref=Genbank:WP_002890343.1;Name=WP_002890343.1;gbkey=CDS;gene=phoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=NLI98_RS19790;product=phosphate response regulator transcription factor PhoB;protein_id=WP_002890343.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4079718 4080923 . + . ID=gene-NLI98_RS19795;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=NLI98_RS19795;old_locus_tag=NLI98_19790 NZ_CP100601.1 Protein Homology CDS 4079718 4080923 . + 0 ID=cds-WP_004191757.1;Parent=gene-NLI98_RS19795;Dbxref=Genbank:WP_004191757.1;Name=WP_004191757.1;Ontology_term=GO:0006259,GO:0008408;gbkey=CDS;gene=sbcD;go_function=3'-5' exonuclease activity|0008408||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805355.1;locus_tag=NLI98_RS19795;product=exonuclease subunit SbcD;protein_id=WP_004191757.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4080920 4084057 . + . ID=gene-NLI98_RS19800;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=NLI98_RS19800;old_locus_tag=NLI98_19795 NZ_CP100601.1 Protein Homology CDS 4080920 4084057 . + 0 ID=cds-WP_088498514.1;Parent=gene-NLI98_RS19800;Dbxref=Genbank:WP_088498514.1;Name=WP_088498514.1;gbkey=CDS;gene=sbcC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225376.1;locus_tag=NLI98_RS19800;product=exonuclease subunit SbcC;protein_id=WP_088498514.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4084131 4085045 . - . ID=gene-NLI98_RS19805;Name=mak;gbkey=Gene;gene=mak;gene_biotype=protein_coding;locus_tag=NLI98_RS19805;old_locus_tag=NLI98_19800 NZ_CP100601.1 Protein Homology CDS 4084131 4085045 . - 0 ID=cds-WP_088498513.1;Parent=gene-NLI98_RS19805;Dbxref=Genbank:WP_088498513.1;Name=WP_088498513.1;gbkey=CDS;gene=mak;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225375.1;locus_tag=NLI98_RS19805;product=fructokinase;protein_id=WP_088498513.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4085137 4086048 . + . ID=gene-NLI98_RS19810;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=NLI98_RS19810;old_locus_tag=NLI98_19805 NZ_CP100601.1 Protein Homology CDS 4085137 4086048 . + 0 ID=cds-WP_002890285.1;Parent=gene-NLI98_RS19810;Dbxref=Genbank:WP_002890285.1;Name=WP_002890285.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120935.1;locus_tag=NLI98_RS19810;product=recombination-associated protein RdgC;protein_id=WP_002890285.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4086120 4086404 . - . ID=gene-NLI98_RS19815;Name=ppnP;gbkey=Gene;gene=ppnP;gene_biotype=protein_coding;locus_tag=NLI98_RS19815;old_locus_tag=NLI98_19810 NZ_CP100601.1 Protein Homology CDS 4086120 4086404 . - 0 ID=cds-WP_002890284.1;Parent=gene-NLI98_RS19815;Dbxref=Genbank:WP_002890284.1;Name=WP_002890284.1;gbkey=CDS;gene=ppnP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225373.1;locus_tag=NLI98_RS19815;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_002890284.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4086482 4087162 . - . ID=gene-NLI98_RS19820;Name=NLI98_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19820;old_locus_tag=NLI98_19815 NZ_CP100601.1 Protein Homology CDS 4086482 4087162 . - 0 ID=cds-WP_004144619.1;Parent=gene-NLI98_RS19820;Dbxref=Genbank:WP_004144619.1;Name=WP_004144619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225372.1;locus_tag=NLI98_RS19820;product=AroM family protein;protein_id=WP_004144619.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4087413 4087604 . - . ID=gene-NLI98_RS19825;Name=NLI98_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19825;old_locus_tag=NLI98_19820 NZ_CP100601.1 Protein Homology CDS 4087413 4087604 . - 0 ID=cds-WP_002890278.1;Parent=gene-NLI98_RS19825;Dbxref=Genbank:WP_002890278.1;Name=WP_002890278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459384.1;locus_tag=NLI98_RS19825;product=YaiA family protein;protein_id=WP_002890278.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4087676 4088209 . - . ID=gene-NLI98_RS19830;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=NLI98_RS19830;old_locus_tag=NLI98_19825 NZ_CP100601.1 Protein Homology CDS 4087676 4088209 . - 0 ID=cds-WP_048264390.1;Parent=gene-NLI98_RS19830;Dbxref=Genbank:WP_048264390.1;Name=WP_048264390.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225370.1;locus_tag=NLI98_RS19830;product=shikimate kinase AroL;protein_id=WP_048264390.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4088538 4089248 . + . ID=gene-NLI98_RS19835;Name=NLI98_RS19835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19835;old_locus_tag=NLI98_19830 NZ_CP100601.1 Protein Homology CDS 4088538 4089248 . + 0 ID=cds-WP_002890273.1;Parent=gene-NLI98_RS19835;Dbxref=Genbank:WP_002890273.1;Name=WP_002890273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225369.1;locus_tag=NLI98_RS19835;product=DUF2076 domain-containing protein;protein_id=WP_002890273.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4089245 4089703 . - . ID=gene-NLI98_RS19840;Name=NLI98_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19840;old_locus_tag=NLI98_19835 NZ_CP100601.1 Protein Homology CDS 4089245 4089703 . - 0 ID=cds-WP_002890230.1;Parent=gene-NLI98_RS19840;Dbxref=Genbank:WP_002890230.1;Name=WP_002890230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225368.1;locus_tag=NLI98_RS19840;product=YaiI/YqxD family protein;protein_id=WP_002890230.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4089820 4090629 . + . ID=gene-NLI98_RS19845;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=NLI98_RS19845;old_locus_tag=NLI98_19840 NZ_CP100601.1 Protein Homology CDS 4089820 4090629 . + 0 ID=cds-WP_002890227.1;Parent=gene-NLI98_RS19845;Dbxref=Genbank:WP_002890227.1;Name=WP_002890227.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225367.1;locus_tag=NLI98_RS19845;product=pyrroline-5-carboxylate reductase;protein_id=WP_002890227.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4090697 4091014 . - . ID=gene-NLI98_RS19850;Name=NLI98_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19850;old_locus_tag=NLI98_19845 NZ_CP100601.1 Protein Homology CDS 4090697 4091014 . - 0 ID=cds-WP_002890225.1;Parent=gene-NLI98_RS19850;Dbxref=Genbank:WP_002890225.1;Name=WP_002890225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225366.1;locus_tag=NLI98_RS19850;product=PsiF family protein;protein_id=WP_002890225.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4091106 4092536 . - . ID=gene-NLI98_RS19855;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=protein_coding;locus_tag=NLI98_RS19855;old_locus_tag=NLI98_19850 NZ_CP100601.1 Protein Homology CDS 4091106 4092536 . - 0 ID=cds-WP_004222931.1;Parent=gene-NLI98_RS19855;Dbxref=Genbank:WP_004222931.1;Name=WP_004222931.1;Ontology_term=GO:0016791;gbkey=CDS;gene=phoA;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225365.1;locus_tag=NLI98_RS19855;product=alkaline phosphatase;protein_id=WP_004222931.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4092626 4092886 . - . ID=gene-NLI98_RS19860;Name=iraP;gbkey=Gene;gene=iraP;gene_biotype=protein_coding;locus_tag=NLI98_RS19860;old_locus_tag=NLI98_19855 NZ_CP100601.1 Protein Homology CDS 4092626 4092886 . - 0 ID=cds-WP_002890221.1;Parent=gene-NLI98_RS19860;Dbxref=Genbank:WP_002890221.1;Name=WP_002890221.1;gbkey=CDS;gene=iraP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225364.1;locus_tag=NLI98_RS19860;product=anti-adapter protein IraP;protein_id=WP_002890221.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4093186 4094385 . - . ID=gene-NLI98_RS19865;Name=NLI98_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19865;old_locus_tag=NLI98_19860 NZ_CP100601.1 Protein Homology CDS 4093186 4094385 . - 0 ID=cds-WP_002890219.1;Parent=gene-NLI98_RS19865;Dbxref=Genbank:WP_002890219.1;Name=WP_002890219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225363.1;locus_tag=NLI98_RS19865;product=multidrug efflux MFS transporter;protein_id=WP_002890219.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4094556 4095239 . - . ID=gene-NLI98_RS19870;Name=NLI98_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19870;old_locus_tag=NLI98_19865 NZ_CP100601.1 Protein Homology CDS 4094556 4095239 . - 0 ID=cds-WP_088498512.1;Parent=gene-NLI98_RS19870;Dbxref=Genbank:WP_088498512.1;Name=WP_088498512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225362.1;locus_tag=NLI98_RS19870;product=extensin family protein;protein_id=WP_088498512.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4095339 4096436 . + . ID=gene-NLI98_RS19875;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=NLI98_RS19875;old_locus_tag=NLI98_19870 NZ_CP100601.1 Protein Homology CDS 4095339 4096436 . + 0 ID=cds-WP_004893950.1;Parent=gene-NLI98_RS19875;Dbxref=Genbank:WP_004893950.1;Name=WP_004893950.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004099379.1;locus_tag=NLI98_RS19875;product=D-alanine--D-alanine ligase;protein_id=WP_004893950.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4096469 4096672 . - . ID=gene-NLI98_RS19880;Name=NLI98_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19880;old_locus_tag=NLI98_19875 NZ_CP100601.1 Protein Homology CDS 4096469 4096672 . - 0 ID=cds-WP_002890215.1;Parent=gene-NLI98_RS19880;Dbxref=Genbank:WP_002890215.1;Name=WP_002890215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225360.1;locus_tag=NLI98_RS19880;product=DUF2754 family protein;protein_id=WP_002890215.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4096925 4097227 . + . ID=gene-NLI98_RS19885;Name=NLI98_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19885;old_locus_tag=NLI98_19880 NZ_CP100601.1 Protein Homology CDS 4096925 4097227 . + 0 ID=cds-WP_002890210.1;Parent=gene-NLI98_RS19885;Dbxref=Genbank:WP_002890210.1;Name=WP_002890210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225359.1;locus_tag=NLI98_RS19885;product=YaiY family protein;protein_id=WP_002890210.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4097224 4098330 . - . ID=gene-NLI98_RS19890;Name=NLI98_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19890;old_locus_tag=NLI98_19885 NZ_CP100601.1 Protein Homology CDS 4097224 4098330 . - 0 ID=cds-WP_004183146.1;Parent=gene-NLI98_RS19890;Dbxref=Genbank:WP_004183146.1;Name=WP_004183146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225358.1;locus_tag=NLI98_RS19890;product=DUF1615 domain-containing protein;protein_id=WP_004183146.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4098349 4099569 . - . ID=gene-NLI98_RS19895;Name=sbmA;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=NLI98_RS19895;old_locus_tag=NLI98_19890 NZ_CP100601.1 Protein Homology CDS 4098349 4099569 . - 0 ID=cds-WP_088498511.1;Parent=gene-NLI98_RS19895;Dbxref=Genbank:WP_088498511.1;Name=WP_088498511.1;Ontology_term=GO:0015833,GO:1904680;gbkey=CDS;gene=sbmA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225357.1;locus_tag=NLI98_RS19895;product=peptide antibiotic transporter SbmA;protein_id=WP_088498511.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4099687 4100199 . - . ID=gene-NLI98_RS19900;Name=NLI98_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19900;old_locus_tag=NLI98_19895 NZ_CP100601.1 Protein Homology CDS 4099687 4100199 . - 0 ID=cds-WP_072159388.1;Parent=gene-NLI98_RS19900;Dbxref=Genbank:WP_072159388.1;Name=WP_072159388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225356.1;locus_tag=NLI98_RS19900;product=isochorismatase family protein;protein_id=WP_072159388.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4100418 4101578 . + . ID=gene-NLI98_RS19905;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=NLI98_RS19905;old_locus_tag=NLI98_19900 NZ_CP100601.1 Protein Homology CDS 4100418 4101578 . + 0 ID=cds-WP_004178722.1;Parent=gene-NLI98_RS19905;Dbxref=Genbank:WP_004178722.1;Name=WP_004178722.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225355.1;locus_tag=NLI98_RS19905;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_004178722.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4101685 4102659 . + . ID=gene-NLI98_RS19910;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=NLI98_RS19910;old_locus_tag=NLI98_19905 NZ_CP100601.1 Protein Homology CDS 4101685 4102659 . + 0 ID=cds-WP_002890201.1;Parent=gene-NLI98_RS19910;Dbxref=Genbank:WP_002890201.1;Name=WP_002890201.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225354.1;locus_tag=NLI98_RS19910;product=porphobilinogen synthase;protein_id=WP_002890201.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4102915 4103406 . + . ID=gene-NLI98_RS19915;Name=NLI98_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19915;old_locus_tag=NLI98_19910 NZ_CP100601.1 Protein Homology CDS 4102915 4103406 . + 0 ID=cds-WP_004178721.1;Parent=gene-NLI98_RS19915;Dbxref=Genbank:WP_004178721.1;Name=WP_004178721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204888.1;locus_tag=NLI98_RS19915;product=transposase;protein_id=WP_004178721.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4103587 4105305 . + . ID=gene-NLI98_RS19920;Name=NLI98_RS19920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19920;old_locus_tag=NLI98_19915 NZ_CP100601.1 Protein Homology CDS 4103587 4105305 . + 0 ID=cds-WP_004144605.1;Parent=gene-NLI98_RS19920;Dbxref=Genbank:WP_004144605.1;Name=WP_004144605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225353.1;locus_tag=NLI98_RS19920;product=lysophospholipid acyltransferase family protein;protein_id=WP_004144605.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4105480 4106331 . - . ID=gene-NLI98_RS19925;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=NLI98_RS19925;old_locus_tag=NLI98_19920 NZ_CP100601.1 Protein Homology CDS 4105480 4106331 . - 0 ID=cds-WP_004147277.1;Parent=gene-NLI98_RS19925;Dbxref=Genbank:WP_004147277.1;Name=WP_004147277.1;Ontology_term=GO:0016491;gbkey=CDS;gene=tauD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225352.1;locus_tag=NLI98_RS19925;product=taurine dioxygenase;protein_id=WP_004147277.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4106328 4107155 . - . ID=gene-NLI98_RS19930;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=NLI98_RS19930;old_locus_tag=NLI98_19925 NZ_CP100601.1 Protein Homology CDS 4106328 4107155 . - 0 ID=cds-WP_004144603.1;Parent=gene-NLI98_RS19930;Dbxref=Genbank:WP_004144603.1;Name=WP_004144603.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tauC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225351.1;locus_tag=NLI98_RS19930;product=taurine ABC transporter permease TauC;protein_id=WP_004144603.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4107152 4107919 . - . ID=gene-NLI98_RS19935;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=NLI98_RS19935;old_locus_tag=NLI98_19930 NZ_CP100601.1 Protein Homology CDS 4107152 4107919 . - 0 ID=cds-WP_048265216.1;Parent=gene-NLI98_RS19935;Dbxref=Genbank:WP_048265216.1;Name=WP_048265216.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;gene=tauB;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225350.1;locus_tag=NLI98_RS19935;product=taurine ABC transporter ATP-binding subunit;protein_id=WP_048265216.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4107931 4108893 . - . ID=gene-NLI98_RS19940;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=NLI98_RS19940;old_locus_tag=NLI98_19935 NZ_CP100601.1 Protein Homology CDS 4107931 4108893 . - 0 ID=cds-WP_032419362.1;Parent=gene-NLI98_RS19940;Dbxref=Genbank:WP_032419362.1;Name=WP_032419362.1;Ontology_term=GO:0055085,GO:0022857,GO:0042597,GO:0043190;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225349.1;locus_tag=NLI98_RS19940;product=taurine ABC transporter substrate-binding protein;protein_id=WP_032419362.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4109133 4110065 . - . ID=gene-NLI98_RS19945;Name=mmuM;gbkey=Gene;gene=mmuM;gene_biotype=protein_coding;locus_tag=NLI98_RS19945;old_locus_tag=NLI98_19940 NZ_CP100601.1 Protein Homology CDS 4109133 4110065 . - 0 ID=cds-WP_004144601.1;Parent=gene-NLI98_RS19945;Dbxref=Genbank:WP_004144601.1;Name=WP_004144601.1;Ontology_term=GO:0009086,GO:0047150;gbkey=CDS;gene=mmuM;go_function=betaine-homocysteine S-methyltransferase activity|0047150||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225348.1;locus_tag=NLI98_RS19945;product=homocysteine S-methyltransferase;protein_id=WP_004144601.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4110052 4111461 . - . ID=gene-NLI98_RS19950;Name=mmuP;gbkey=Gene;gene=mmuP;gene_biotype=protein_coding;locus_tag=NLI98_RS19950;old_locus_tag=NLI98_19945 NZ_CP100601.1 Protein Homology CDS 4110052 4111461 . - 0 ID=cds-WP_002890161.1;Parent=gene-NLI98_RS19950;Dbxref=Genbank:WP_002890161.1;Name=WP_002890161.1;Ontology_term=GO:0055085;gbkey=CDS;gene=mmuP;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225347.1;locus_tag=NLI98_RS19950;product=S-methylmethionine permease;protein_id=WP_002890161.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4111544 4111672 . - . ID=gene-NLI98_RS19955;Name=NLI98_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19955;old_locus_tag=NLI98_19950 NZ_CP100601.1 Protein Homology CDS 4111544 4111672 . - 0 ID=cds-WP_072143245.1;Parent=gene-NLI98_RS19955;Dbxref=Genbank:WP_072143245.1;Name=WP_072143245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225346.1;locus_tag=NLI98_RS19955;product=hypothetical protein;protein_id=WP_072143245.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4111735 4113114 . + . ID=gene-NLI98_RS19960;Name=eat;gbkey=Gene;gene=eat;gene_biotype=protein_coding;locus_tag=NLI98_RS19960;old_locus_tag=NLI98_19955 NZ_CP100601.1 Protein Homology CDS 4111735 4113114 . + 0 ID=cds-WP_004177284.1;Parent=gene-NLI98_RS19960;Dbxref=Genbank:WP_004177284.1;Name=WP_004177284.1;Ontology_term=GO:0006865,GO:0015171,GO:0016020;gbkey=CDS;gene=eat;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225345.1;locus_tag=NLI98_RS19960;product=ethanolamine permease;protein_id=WP_004177284.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4113124 4114512 . + . ID=gene-NLI98_RS19965;Name=NLI98_RS19965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19965;old_locus_tag=NLI98_19960 NZ_CP100601.1 Protein Homology CDS 4113124 4114512 . + 0 ID=cds-WP_004144598.1;Parent=gene-NLI98_RS19965;Dbxref=Genbank:WP_004144598.1;Name=WP_004144598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225344.1;locus_tag=NLI98_RS19965;product=ethanolamine ammonia-lyase subunit EutB;protein_id=WP_004144598.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4114509 4115285 . + . ID=gene-NLI98_RS19970;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=NLI98_RS19970;old_locus_tag=NLI98_19965 NZ_CP100601.1 Protein Homology CDS 4114509 4115285 . + 0 ID=cds-WP_004183137.1;Parent=gene-NLI98_RS19970;Dbxref=Genbank:WP_004183137.1;Name=WP_004183137.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225343.1;locus_tag=NLI98_RS19970;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_004183137.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4115726 4115869 . - . ID=gene-NLI98_RS19975;Name=NLI98_RS19975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19975;old_locus_tag=NLI98_19970 NZ_CP100601.1 Protein Homology CDS 4115726 4115869 . - 0 ID=cds-WP_004144596.1;Parent=gene-NLI98_RS19975;Dbxref=Genbank:WP_004144596.1;Name=WP_004144596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225342.1;locus_tag=NLI98_RS19975;product=hypothetical protein;protein_id=WP_004144596.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4115862 4116968 . + . ID=gene-NLI98_RS19980;Name=NLI98_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19980;old_locus_tag=NLI98_19975 NZ_CP100601.1 Protein Homology CDS 4115862 4116968 . + 0 ID=cds-WP_004147267.1;Parent=gene-NLI98_RS19980;Dbxref=Genbank:WP_004147267.1;Name=WP_004147267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225341.1;locus_tag=NLI98_RS19980;product=ABC transporter substrate-binding protein;protein_id=WP_004147267.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4116988 4117887 . + . ID=gene-NLI98_RS19985;Name=NLI98_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19985;old_locus_tag=NLI98_19980 NZ_CP100601.1 Protein Homology CDS 4116988 4117887 . + 0 ID=cds-WP_002890128.1;Parent=gene-NLI98_RS19985;Dbxref=Genbank:WP_002890128.1;Name=WP_002890128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225340.1;locus_tag=NLI98_RS19985;product=branched-chain amino acid ABC transporter permease;protein_id=WP_002890128.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4117887 4118936 . + . ID=gene-NLI98_RS19990;Name=NLI98_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19990;old_locus_tag=NLI98_19985 NZ_CP100601.1 Protein Homology CDS 4117887 4118936 . + 0 ID=cds-WP_004183134.1;Parent=gene-NLI98_RS19990;Dbxref=Genbank:WP_004183134.1;Name=WP_004183134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225339.1;locus_tag=NLI98_RS19990;product=branched-chain amino acid ABC transporter permease;protein_id=WP_004183134.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4118923 4119705 . + . ID=gene-NLI98_RS19995;Name=NLI98_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS19995;old_locus_tag=NLI98_19990 NZ_CP100601.1 Protein Homology CDS 4118923 4119705 . + 0 ID=cds-WP_004151354.1;Parent=gene-NLI98_RS19995;Dbxref=Genbank:WP_004151354.1;Name=WP_004151354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225338.1;locus_tag=NLI98_RS19995;product=ABC transporter ATP-binding protein;protein_id=WP_004151354.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4119698 4120393 . + . ID=gene-NLI98_RS20000;Name=NLI98_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20000;old_locus_tag=NLI98_19995 NZ_CP100601.1 Protein Homology CDS 4119698 4120393 . + 0 ID=cds-WP_002890126.1;Parent=gene-NLI98_RS20000;Dbxref=Genbank:WP_002890126.1;Name=WP_002890126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225337.1;locus_tag=NLI98_RS20000;product=ABC transporter ATP-binding protein;protein_id=WP_002890126.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4120510 4120680 . - . ID=gene-NLI98_RS20005;Name=NLI98_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20005;old_locus_tag=NLI98_20000 NZ_CP100601.1 Protein Homology CDS 4120510 4120680 . - 0 ID=cds-WP_048291281.1;Parent=gene-NLI98_RS20005;Dbxref=Genbank:WP_048291281.1;Name=WP_048291281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002890108.1;locus_tag=NLI98_RS20005;product=hypothetical protein;protein_id=WP_048291281.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4121014 4121823 . + . ID=gene-NLI98_RS20010;Name=NLI98_RS20010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20010;old_locus_tag=NLI98_20005 NZ_CP100601.1 Protein Homology CDS 4121014 4121823 . + 0 ID=cds-WP_002890106.1;Parent=gene-NLI98_RS20010;Dbxref=Genbank:WP_002890106.1;Name=WP_002890106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225335.1;locus_tag=NLI98_RS20010;product=ABC transporter substrate-binding protein;protein_id=WP_002890106.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4121825 4122643 . + . ID=gene-NLI98_RS20015;Name=NLI98_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20015;old_locus_tag=NLI98_20010 NZ_CP100601.1 Protein Homology CDS 4121825 4122643 . + 0 ID=cds-WP_004151355.1;Parent=gene-NLI98_RS20015;Dbxref=Genbank:WP_004151355.1;Name=WP_004151355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225334.1;locus_tag=NLI98_RS20015;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_004151355.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4122640 4123392 . + . ID=gene-NLI98_RS20020;Name=NLI98_RS20020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20020;old_locus_tag=NLI98_20015 NZ_CP100601.1 Protein Homology CDS 4122640 4123392 . + 0 ID=cds-WP_004177291.1;Parent=gene-NLI98_RS20020;Dbxref=Genbank:WP_004177291.1;Name=WP_004177291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225333.1;locus_tag=NLI98_RS20020;product=amino acid ABC transporter permease;protein_id=WP_004177291.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4123382 4124071 . + . ID=gene-NLI98_RS20025;Name=NLI98_RS20025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20025;old_locus_tag=NLI98_20020 NZ_CP100601.1 Protein Homology CDS 4123382 4124071 . + 0 ID=cds-WP_004178714.1;Parent=gene-NLI98_RS20025;Dbxref=Genbank:WP_004178714.1;Name=WP_004178714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225332.1;locus_tag=NLI98_RS20025;product=amino acid ABC transporter permease;protein_id=WP_004178714.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4124075 4124785 . - . ID=gene-NLI98_RS20030;Name=NLI98_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20030;old_locus_tag=NLI98_20025 NZ_CP100601.1 Protein Homology CDS 4124075 4124785 . - 0 ID=cds-WP_002890061.1;Parent=gene-NLI98_RS20030;Dbxref=Genbank:WP_002890061.1;Name=WP_002890061.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414823.2;locus_tag=NLI98_RS20030;product=fimbria/pilus periplasmic chaperone;protein_id=WP_002890061.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4124754 4126397 . - . ID=gene-NLI98_RS20035;Name=ecpD;gbkey=Gene;gene=ecpD;gene_biotype=protein_coding;locus_tag=NLI98_RS20035;old_locus_tag=NLI98_20030 NZ_CP100601.1 Protein Homology CDS 4124754 4126397 . - 0 ID=cds-WP_002890060.1;Parent=gene-NLI98_RS20035;Dbxref=Genbank:WP_002890060.1;Name=WP_002890060.1;gbkey=CDS;gene=ecpD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225330.1;locus_tag=NLI98_RS20035;product=fimbrial adhesin EcpD;protein_id=WP_002890060.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4126387 4128912 . - . ID=gene-NLI98_RS20040;Name=NLI98_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20040;old_locus_tag=NLI98_20035 NZ_CP100601.1 Protein Homology CDS 4126387 4128912 . - 0 ID=cds-WP_023287288.1;Parent=gene-NLI98_RS20040;Dbxref=Genbank:WP_023287288.1;Name=WP_023287288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225329.1;locus_tag=NLI98_RS20040;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_023287288.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4128938 4129606 . - . ID=gene-NLI98_RS20045;Name=NLI98_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20045;old_locus_tag=NLI98_20040 NZ_CP100601.1 Protein Homology CDS 4128938 4129606 . - 0 ID=cds-WP_004144586.1;Parent=gene-NLI98_RS20045;Dbxref=Genbank:WP_004144586.1;Name=WP_004144586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225328.1;locus_tag=NLI98_RS20045;product=fimbrial chaperone EcpB;protein_id=WP_004144586.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4129665 4130252 . - . ID=gene-NLI98_RS20050;Name=ecpA;gbkey=Gene;gene=ecpA;gene_biotype=protein_coding;gene_synonym=matB;locus_tag=NLI98_RS20050;old_locus_tag=NLI98_20045 NZ_CP100601.1 Protein Homology CDS 4129665 4130252 . - 0 ID=cds-WP_002890053.1;Parent=gene-NLI98_RS20050;Dbxref=Genbank:WP_002890053.1;Name=WP_002890053.1;gbkey=CDS;gene=ecpA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225327.1;locus_tag=NLI98_RS20050;product=common pilus major fimbrillin subunit EcpA;protein_id=WP_002890053.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4130327 4130869 . - . ID=gene-NLI98_RS20055;Name=NLI98_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20055;old_locus_tag=NLI98_20050 NZ_CP100601.1 Protein Homology CDS 4130327 4130869 . - 0 ID=cds-WP_004144585.1;Parent=gene-NLI98_RS20055;Dbxref=Genbank:WP_004144585.1;Name=WP_004144585.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225326.1;locus_tag=NLI98_RS20055;product=helix-turn-helix transcriptional regulator;protein_id=WP_004144585.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4131718 4132560 . + . ID=gene-NLI98_RS20060;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=NLI98_RS20060;old_locus_tag=NLI98_20055 NZ_CP100601.1 Protein Homology CDS 4131718 4132560 . + 0 ID=cds-WP_004177295.1;Parent=gene-NLI98_RS20060;Dbxref=Genbank:WP_004177295.1;Name=WP_004177295.1;Ontology_term=GO:0015716,GO:0005524,GO:0015416,GO:0009898,GO:0055052;gbkey=CDS;gene=phnC;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225325.1;locus_tag=NLI98_RS20060;product=phosphonate ABC transporter ATP-binding protein;protein_id=WP_004177295.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4132583 4133521 . + . ID=gene-NLI98_RS20065;Name=phnD;gbkey=Gene;gene=phnD;gene_biotype=protein_coding;locus_tag=NLI98_RS20065;old_locus_tag=NLI98_20060 NZ_CP100601.1 Protein Homology CDS 4132583 4133521 . + 0 ID=cds-WP_002890002.1;Parent=gene-NLI98_RS20065;Dbxref=Genbank:WP_002890002.1;Name=WP_002890002.1;Ontology_term=GO:0015716,GO:0043190;gbkey=CDS;gene=phnD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225324.1;locus_tag=NLI98_RS20065;product=phosphonate ABC transporter substrate-binding protein;protein_id=WP_002890002.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4133588 4134460 . + . ID=gene-NLI98_RS20070;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=NLI98_RS20070;old_locus_tag=NLI98_20065 NZ_CP100601.1 Protein Homology CDS 4133588 4134460 . + 0 ID=cds-WP_002890001.1;Parent=gene-NLI98_RS20070;Dbxref=Genbank:WP_002890001.1;Name=WP_002890001.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225323.1;locus_tag=NLI98_RS20070;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_002890001.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4134457 4135341 . + . ID=gene-NLI98_RS20075;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=NLI98_RS20075;old_locus_tag=NLI98_20070 NZ_CP100601.1 Protein Homology CDS 4134457 4135341 . + 0 ID=cds-WP_004177298.1;Parent=gene-NLI98_RS20075;Dbxref=Genbank:WP_004177298.1;Name=WP_004177298.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225322.1;locus_tag=NLI98_RS20075;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WP_004177298.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4135661 4135831 . + . ID=gene-NLI98_RS20080;Name=NLI98_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20080;old_locus_tag=NLI98_20075 NZ_CP100601.1 GeneMarkS-2+ CDS 4135661 4135831 . + 0 ID=cds-WP_077269238.1;Parent=gene-NLI98_RS20080;Dbxref=Genbank:WP_077269238.1;Name=WP_077269238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS20080;product=LysR family transcriptional regulator;protein_id=WP_077269238.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4136181 4136846 . - . ID=gene-NLI98_RS20085;Name=NLI98_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20085;old_locus_tag=NLI98_20080 NZ_CP100601.1 Protein Homology CDS 4136181 4136846 . - 0 ID=cds-WP_004177299.1;Parent=gene-NLI98_RS20085;Dbxref=Genbank:WP_004177299.1;Name=WP_004177299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225320.1;locus_tag=NLI98_RS20085;product=HAD-IB family hydrolase;protein_id=WP_004177299.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4136942 4137811 . - . ID=gene-NLI98_RS20090;Name=NLI98_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20090;old_locus_tag=NLI98_20085 NZ_CP100601.1 Protein Homology CDS 4136942 4137811 . - 0 ID=cds-WP_088498510.1;Parent=gene-NLI98_RS20090;Dbxref=Genbank:WP_088498510.1;Name=WP_088498510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225319.1;locus_tag=NLI98_RS20090;product=DMT family transporter;protein_id=WP_088498510.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4138219 4138785 . + . ID=gene-NLI98_RS20095;Name=NLI98_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20095;old_locus_tag=NLI98_20090 NZ_CP100601.1 Protein Homology CDS 4138219 4138785 . + 0 ID=cds-WP_040152243.1;Parent=gene-NLI98_RS20095;Dbxref=Genbank:WP_040152243.1;Name=WP_040152243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225318.1;locus_tag=NLI98_RS20095;product=NlpC/P60 family protein;protein_id=WP_040152243.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4138830 4139882 . - . ID=gene-NLI98_RS20100;Name=phoE;gbkey=Gene;gene=phoE;gene_biotype=protein_coding;locus_tag=NLI98_RS20100;old_locus_tag=NLI98_20095 NZ_CP100601.1 Protein Homology CDS 4138830 4139882 . - 0 ID=cds-WP_004144576.1;Parent=gene-NLI98_RS20100;Dbxref=Genbank:WP_004144576.1;Name=WP_004144576.1;Ontology_term=GO:0034220,GO:0015288,GO:0016020;gbkey=CDS;gene=phoE;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225317.1;locus_tag=NLI98_RS20100;product=phosphoporin PhoE;protein_id=WP_004144576.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4140172 4141275 . + . ID=gene-NLI98_RS20105;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=NLI98_RS20105;old_locus_tag=NLI98_20100 NZ_CP100601.1 Protein Homology CDS 4140172 4141275 . + 0 ID=cds-WP_004144574.1;Parent=gene-NLI98_RS20105;Dbxref=Genbank:WP_004144574.1;Name=WP_004144574.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225315.1;locus_tag=NLI98_RS20105;product=glutamate 5-kinase;protein_id=WP_004144574.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4141286 4142539 . + . ID=gene-NLI98_RS20110;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=NLI98_RS20110;old_locus_tag=NLI98_20105 NZ_CP100601.1 Protein Homology CDS 4141286 4142539 . + 0 ID=cds-WP_004147253.1;Parent=gene-NLI98_RS20110;Dbxref=Genbank:WP_004147253.1;Name=WP_004147253.1;Ontology_term=GO:0006561,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225314.1;locus_tag=NLI98_RS20110;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_004147253.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4142653 4142728 . + . ID=gene-NLI98_RS20115;Name=NLI98_RS20115;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS20115;old_locus_tag=NLI98_20110 NZ_CP100601.1 tRNAscan-SE tRNA 4142653 4142728 . + . ID=rna-NLI98_RS20115;Parent=gene-NLI98_RS20115;anticodon=(pos:4142686..4142688);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS20115;product=tRNA-Thr NZ_CP100601.1 tRNAscan-SE exon 4142653 4142728 . + . ID=exon-NLI98_RS20115-1;Parent=rna-NLI98_RS20115;anticodon=(pos:4142686..4142688);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS20115;product=tRNA-Thr NZ_CP100601.1 RefSeq gene 4142877 4142999 . + . ID=gene-NLI98_RS20120;Name=NLI98_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20120;old_locus_tag=NLI98_20115 NZ_CP100601.1 Protein Homology CDS 4142877 4142999 . + 0 ID=cds-WP_229302122.1;Parent=gene-NLI98_RS20120;Dbxref=Genbank:WP_229302122.1;Name=WP_229302122.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013132.2;locus_tag=NLI98_RS20120;product=hypothetical protein;protein_id=WP_229302122.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4143203 4144369 . - . ID=gene-NLI98_RS20125;Name=NLI98_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20125;old_locus_tag=NLI98_20120 NZ_CP100601.1 Protein Homology CDS 4143203 4144369 . - 0 ID=cds-WP_102024155.1;Parent=gene-NLI98_RS20125;Dbxref=Genbank:WP_102024155.1;Name=WP_102024155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011977703.1;locus_tag=NLI98_RS20125;product=hypothetical protein;protein_id=WP_102024155.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4144420 4146945 . - . ID=gene-NLI98_RS20130;Name=NLI98_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20130;old_locus_tag=NLI98_20125 NZ_CP100601.1 Protein Homology CDS 4144420 4146945 . - 0 ID=cds-WP_158414428.1;Parent=gene-NLI98_RS20130;Dbxref=Genbank:WP_158414428.1;Name=WP_158414428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145424.1;locus_tag=NLI98_RS20130;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_158414428.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4146983 4147681 . - . ID=gene-NLI98_RS20135;Name=NLI98_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20135;old_locus_tag=NLI98_20130 NZ_CP100601.1 Protein Homology CDS 4146983 4147681 . - 0 ID=cds-WP_004183108.1;Parent=gene-NLI98_RS20135;Dbxref=Genbank:WP_004183108.1;Name=WP_004183108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011977701.1;locus_tag=NLI98_RS20135;product=molecular chaperone;protein_id=WP_004183108.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4147730 4148248 . - . ID=gene-NLI98_RS20140;Name=NLI98_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20140;old_locus_tag=NLI98_20135 NZ_CP100601.1 Protein Homology CDS 4147730 4148248 . - 0 ID=cds-WP_004183106.1;Parent=gene-NLI98_RS20140;Dbxref=Genbank:WP_004183106.1;Name=WP_004183106.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183106.1;locus_tag=NLI98_RS20140;product=fimbrial protein;protein_id=WP_004183106.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4149041 4149403 . + . ID=gene-NLI98_RS20145;Name=NLI98_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20145;old_locus_tag=NLI98_20140 NZ_CP100601.1 Protein Homology CDS 4149041 4149403 . + 0 ID=cds-WP_021464581.1;Parent=gene-NLI98_RS20145;Dbxref=Genbank:WP_021464581.1;Name=WP_021464581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004115591.1;locus_tag=NLI98_RS20145;product=RidA family protein;protein_id=WP_021464581.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4149549 4149944 . - . ID=gene-NLI98_RS20150;Name=NLI98_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20150;old_locus_tag=NLI98_20145 NZ_CP100601.1 Protein Homology CDS 4149549 4149944 . - 0 ID=cds-WP_004183101.1;Parent=gene-NLI98_RS20150;Dbxref=Genbank:WP_004183101.1;Name=WP_004183101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183101.1;locus_tag=NLI98_RS20150;product=VOC family protein;protein_id=WP_004183101.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4150612 4151376 . + . ID=gene-NLI98_RS20155;Name=NLI98_RS20155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20155;old_locus_tag=NLI98_20150 NZ_CP100601.1 Protein Homology CDS 4150612 4151376 . + 0 ID=cds-WP_223362195.1;Parent=gene-NLI98_RS20155;Dbxref=Genbank:WP_223362195.1;Name=WP_223362195.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012907047.1;locus_tag=NLI98_RS20155;product=winged helix-turn-helix domain-containing protein;protein_id=WP_223362195.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4151369 4151842 . + . ID=gene-NLI98_RS20160;Name=NLI98_RS20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20160;old_locus_tag=NLI98_20155 NZ_CP100601.1 Protein Homology CDS 4151369 4151842 . + 0 ID=cds-WP_004183099.1;Parent=gene-NLI98_RS20160;Dbxref=Genbank:WP_004183099.1;Name=WP_004183099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183099.1;locus_tag=NLI98_RS20160;product=hypothetical protein;protein_id=WP_004183099.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4152099 4152455 . - . ID=gene-NLI98_RS20165;Name=NLI98_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20165;old_locus_tag=NLI98_20160 NZ_CP100601.1 Protein Homology CDS 4152099 4152455 . - 0 ID=cds-WP_072071792.1;Parent=gene-NLI98_RS20165;Dbxref=Genbank:WP_072071792.1;Name=WP_072071792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011977699.1;locus_tag=NLI98_RS20165;product=DUF4156 domain-containing protein;protein_id=WP_072071792.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4152694 4153230 . - . ID=gene-NLI98_RS20170;Name=NLI98_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20170;old_locus_tag=NLI98_20165 NZ_CP100601.1 Protein Homology CDS 4152694 4153230 . - 0 ID=cds-WP_049109950.1;Parent=gene-NLI98_RS20170;Dbxref=Genbank:WP_049109950.1;Name=WP_049109950.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001527322.1;locus_tag=NLI98_RS20170;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_049109950.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4153440 4153928 . - . ID=gene-NLI98_RS20175;Name=NLI98_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20175;old_locus_tag=NLI98_20170 NZ_CP100601.1 Protein Homology CDS 4153440 4153928 . - 0 ID=cds-WP_004183096.1;Parent=gene-NLI98_RS20175;Dbxref=Genbank:WP_004183096.1;Name=WP_004183096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000545422.1;locus_tag=NLI98_RS20175;product=hypothetical protein;protein_id=WP_004183096.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4153901 4154635 . - . ID=gene-NLI98_RS20180;Name=NLI98_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20180;old_locus_tag=NLI98_20175 NZ_CP100601.1 Protein Homology CDS 4153901 4154635 . - 0 ID=cds-WP_023282211.1;Parent=gene-NLI98_RS20180;Dbxref=Genbank:WP_023282211.1;Name=WP_023282211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000081369.1;locus_tag=NLI98_RS20180;product=hypothetical protein;protein_id=WP_023282211.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4154692 4156254 . - . ID=gene-NLI98_RS20185;Name=NLI98_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20185;old_locus_tag=NLI98_20180 NZ_CP100601.1 Protein Homology CDS 4154692 4156254 . - 0 ID=cds-WP_004183094.1;Parent=gene-NLI98_RS20185;Dbxref=Genbank:WP_004183094.1;Name=WP_004183094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004183094.1;locus_tag=NLI98_RS20185;product=EAL domain-containing protein;protein_id=WP_004183094.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4156313 4156813 . - . ID=gene-NLI98_RS20190;Name=NLI98_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20190;old_locus_tag=NLI98_20185 NZ_CP100601.1 Protein Homology CDS 4156313 4156813 . - 0 ID=cds-WP_088498508.1;Parent=gene-NLI98_RS20190;Dbxref=Genbank:WP_088498508.1;Name=WP_088498508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000291810.1;locus_tag=NLI98_RS20190;product=hypothetical protein;protein_id=WP_088498508.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4156786 4157532 . - . ID=gene-NLI98_RS20195;Name=NLI98_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20195;old_locus_tag=NLI98_20190 NZ_CP100601.1 Protein Homology CDS 4156786 4157532 . - 0 ID=cds-WP_065782602.1;Parent=gene-NLI98_RS20195;Dbxref=Genbank:WP_065782602.1;Name=WP_065782602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001005860.1;locus_tag=NLI98_RS20195;product=hypothetical protein;protein_id=WP_065782602.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4158009 4158545 . + . ID=gene-NLI98_RS20200;Name=NLI98_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20200;old_locus_tag=NLI98_20195 NZ_CP100601.1 Protein Homology CDS 4158009 4158545 . + 0 ID=cds-WP_088498506.1;Parent=gene-NLI98_RS20200;Dbxref=Genbank:WP_088498506.1;Name=WP_088498506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004105475.1;locus_tag=NLI98_RS20200;product=type 1 fimbrial protein;protein_id=WP_088498506.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4158605 4159363 . + . ID=gene-NLI98_RS20205;Name=NLI98_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20205;old_locus_tag=NLI98_20200 NZ_CP100601.1 Protein Homology CDS 4158605 4159363 . + 0 ID=cds-WP_009309770.1;Parent=gene-NLI98_RS20205;Dbxref=Genbank:WP_009309770.1;Name=WP_009309770.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011977695.1;locus_tag=NLI98_RS20205;product=fimbria/pilus periplasmic chaperone;protein_id=WP_009309770.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4159347 4161902 . + . ID=gene-NLI98_RS20210;Name=NLI98_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20210;old_locus_tag=NLI98_20205 NZ_CP100601.1 Protein Homology CDS 4159347 4161902 . + 0 ID=cds-WP_088498505.1;Parent=gene-NLI98_RS20210;Dbxref=Genbank:WP_088498505.1;Name=WP_088498505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015406088.1;locus_tag=NLI98_RS20210;product=fimbrial outer membrane usher protein;protein_id=WP_088498505.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4161907 4163241 . + . ID=gene-NLI98_RS20215;Name=stbD;gbkey=Gene;gene=stbD;gene_biotype=protein_coding;locus_tag=NLI98_RS20215;old_locus_tag=NLI98_20210 NZ_CP100601.1 Protein Homology CDS 4161907 4163241 . + 0 ID=cds-WP_088498504.1;Parent=gene-NLI98_RS20215;Dbxref=Genbank:WP_088498504.1;Name=WP_088498504.1;gbkey=CDS;gene=stbD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011977693.1;locus_tag=NLI98_RS20215;product=fimbrial usher protein StbD;protein_id=WP_088498504.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4163207 4163941 . + . ID=gene-NLI98_RS20220;Name=NLI98_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20220;old_locus_tag=NLI98_20215 NZ_CP100601.1 Protein Homology CDS 4163207 4163941 . + 0 ID=cds-WP_088498503.1;Parent=gene-NLI98_RS20220;Dbxref=Genbank:WP_088498503.1;Name=WP_088498503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009309773.1;locus_tag=NLI98_RS20220;product=fimbrial assembly chaperone;protein_id=WP_088498503.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4164132 4164596 . - . ID=gene-NLI98_RS20225;Name=NLI98_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20225;old_locus_tag=NLI98_20220 NZ_CP100601.1 Protein Homology CDS 4164132 4164596 . - 0 ID=cds-WP_009309774.1;Parent=gene-NLI98_RS20225;Dbxref=Genbank:WP_009309774.1;Name=WP_009309774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004222817.1;locus_tag=NLI98_RS20225;product=HNH endonuclease;protein_id=WP_009309774.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4164868 4165617 . - . ID=gene-NLI98_RS20230;Name=NLI98_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20230;old_locus_tag=NLI98_20225 NZ_CP100601.1 Protein Homology CDS 4164868 4165617 . - 0 ID=cds-WP_031591225.1;Parent=gene-NLI98_RS20230;Dbxref=Genbank:WP_031591225.1;Name=WP_031591225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225286.1;locus_tag=NLI98_RS20230;product=class I SAM-dependent methyltransferase;protein_id=WP_031591225.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4165675 4165932 . - . ID=gene-NLI98_RS20235;Name=NLI98_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20235;old_locus_tag=NLI98_20230 NZ_CP100601.1 Protein Homology CDS 4165675 4165932 . - 0 ID=cds-WP_002889848.1;Parent=gene-NLI98_RS20235;Dbxref=Genbank:WP_002889848.1;Name=WP_002889848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225285.1;locus_tag=NLI98_RS20235;product=YjhX family toxin;protein_id=WP_002889848.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4166394 4167371 . + . ID=gene-NLI98_RS20240;Name=glaH;gbkey=Gene;gene=glaH;gene_biotype=protein_coding;locus_tag=NLI98_RS20240;old_locus_tag=NLI98_20235 NZ_CP100601.1 Protein Homology CDS 4166394 4167371 . + 0 ID=cds-WP_002889847.1;Parent=gene-NLI98_RS20240;Dbxref=Genbank:WP_002889847.1;Name=WP_002889847.1;Ontology_term=GO:0050498;gbkey=CDS;gene=glaH;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C with 2-oxoglutarate as one donor%2C and the other dehydrogenated|0050498||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_417145.4;locus_tag=NLI98_RS20240;product=glutarate dioxygenase GlaH;protein_id=WP_002889847.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4167399 4168667 . + . ID=gene-NLI98_RS20245;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=NLI98_RS20245;old_locus_tag=NLI98_20240 NZ_CP100601.1 Protein Homology CDS 4167399 4168667 . + 0 ID=cds-WP_004178684.1;Parent=gene-NLI98_RS20245;Dbxref=Genbank:WP_004178684.1;Name=WP_004178684.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225283.1;locus_tag=NLI98_RS20245;product=L-2-hydroxyglutarate oxidase;protein_id=WP_004178684.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4168692 4170140 . + . ID=gene-NLI98_RS20250;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=NLI98_RS20250;old_locus_tag=NLI98_20245 NZ_CP100601.1 Protein Homology CDS 4168692 4170140 . + 0 ID=cds-WP_004178683.1;Parent=gene-NLI98_RS20250;Dbxref=Genbank:WP_004178683.1;Name=WP_004178683.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225282.1;locus_tag=NLI98_RS20250;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_004178683.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4170153 4171436 . + . ID=gene-NLI98_RS20255;Name=gabT;gbkey=Gene;gene=gabT;gene_biotype=protein_coding;locus_tag=NLI98_RS20255;old_locus_tag=NLI98_20250 NZ_CP100601.1 Protein Homology CDS 4170153 4171436 . + 0 ID=cds-WP_032416706.1;Parent=gene-NLI98_RS20255;Dbxref=Genbank:WP_032416706.1;Name=WP_032416706.1;Ontology_term=GO:0009448,GO:0003867,GO:0030170;gbkey=CDS;gene=gabT;go_function=4-aminobutyrate transaminase activity|0003867||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225281.1;locus_tag=NLI98_RS20255;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_032416706.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4171586 4172986 . + . ID=gene-NLI98_RS20260;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=NLI98_RS20260;old_locus_tag=NLI98_20255 NZ_CP100601.1 Protein Homology CDS 4171586 4172986 . + 0 ID=cds-WP_002889795.1;Parent=gene-NLI98_RS20260;Dbxref=Genbank:WP_002889795.1;Name=WP_002889795.1;Ontology_term=GO:0006865,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225280.1;locus_tag=NLI98_RS20260;product=GABA permease;protein_id=WP_002889795.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4173032 4173724 . + . ID=gene-NLI98_RS20265;Name=csiR;gbkey=Gene;gene=csiR;gene_biotype=protein_coding;locus_tag=NLI98_RS20265;old_locus_tag=NLI98_20260 NZ_CP100601.1 Protein Homology CDS 4173032 4173724 . + 0 ID=cds-WP_017879787.1;Parent=gene-NLI98_RS20265;Dbxref=Genbank:WP_017879787.1;Name=WP_017879787.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=csiR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079543.1;locus_tag=NLI98_RS20265;product=DNA-binding transcriptional regulator CsiR;protein_id=WP_017879787.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4173726 4174094 . - . ID=gene-NLI98_RS20270;Name=NLI98_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20270;old_locus_tag=NLI98_20265 NZ_CP100601.1 Protein Homology CDS 4173726 4174094 . - 0 ID=cds-WP_023325096.1;Parent=gene-NLI98_RS20270;Dbxref=Genbank:WP_023325096.1;Name=WP_023325096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585085.1;locus_tag=NLI98_RS20270;product=hypothetical protein;protein_id=WP_023325096.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4174203 4175096 . - . ID=gene-NLI98_RS20275;Name=NLI98_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20275;old_locus_tag=NLI98_20270 NZ_CP100601.1 Protein Homology CDS 4174203 4175096 . - 0 ID=cds-WP_264451959.1;Parent=gene-NLI98_RS20275;Dbxref=Genbank:WP_264451959.1;Name=WP_264451959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017879788.1;locus_tag=NLI98_RS20275;product=LysR substrate-binding domain-containing protein;protein_id=WP_264451959.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4175246 4176256 . + . ID=gene-NLI98_RS20280;Name=NLI98_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20280;old_locus_tag=NLI98_20275 NZ_CP100601.1 Protein Homology CDS 4175246 4176256 . + 0 ID=cds-WP_032419376.1;Parent=gene-NLI98_RS20280;Dbxref=Genbank:WP_032419376.1;Name=WP_032419376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015368058.1;locus_tag=NLI98_RS20280;product=aldo/keto reductase;protein_id=WP_032419376.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4176300 4177097 . + . ID=gene-NLI98_RS20285;Name=NLI98_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20285;old_locus_tag=NLI98_20280 NZ_CP100601.1 Protein Homology CDS 4176300 4177097 . + 0 ID=cds-WP_065782592.1;Parent=gene-NLI98_RS20285;Dbxref=Genbank:WP_065782592.1;Name=WP_065782592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000762717.1;locus_tag=NLI98_RS20285;product=SDR family oxidoreductase;protein_id=WP_065782592.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4177130 4177546 . + . ID=gene-NLI98_RS20290;Name=NLI98_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20290;old_locus_tag=NLI98_20285 NZ_CP100601.1 Protein Homology CDS 4177130 4177546 . + 0 ID=cds-WP_040215263.1;Parent=gene-NLI98_RS20290;Dbxref=Genbank:WP_040215263.1;Name=WP_040215263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001699669.1;locus_tag=NLI98_RS20290;product=SRPBCC family protein;protein_id=WP_040215263.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4177704 4177916 . + . ID=gene-NLI98_RS20295;Name=NLI98_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20295;old_locus_tag=NLI98_20290 NZ_CP100601.1 Protein Homology CDS 4177704 4177916 . + 0 ID=cds-WP_032420366.1;Parent=gene-NLI98_RS20295;Dbxref=Genbank:WP_032420366.1;Name=WP_032420366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079547.1;locus_tag=NLI98_RS20295;product=DUF1471 domain-containing protein;protein_id=WP_032420366.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4178285 4178683 . - . ID=gene-NLI98_RS20300;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=NLI98_RS20300;old_locus_tag=NLI98_20295 NZ_CP100601.1 Protein Homology CDS 4178285 4178683 . - 0 ID=cds-WP_002889793.1;Parent=gene-NLI98_RS20300;Dbxref=Genbank:WP_002889793.1;Name=WP_002889793.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225278.1;locus_tag=NLI98_RS20300;product=sigma factor-binding protein Crl;protein_id=WP_002889793.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4178741 4179985 . - . ID=gene-NLI98_RS20305;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=NLI98_RS20305;old_locus_tag=NLI98_20300 NZ_CP100601.1 Protein Homology CDS 4178741 4179985 . - 0 ID=cds-WP_088498502.1;Parent=gene-NLI98_RS20305;Dbxref=Genbank:WP_088498502.1;Name=WP_088498502.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225277.1;locus_tag=NLI98_RS20305;product=esterase FrsA;protein_id=WP_088498502.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4180091 4180549 . - . ID=gene-NLI98_RS20310;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=NLI98_RS20310;old_locus_tag=NLI98_20305 NZ_CP100601.1 Protein Homology CDS 4180091 4180549 . - 0 ID=cds-WP_002889733.1;Parent=gene-NLI98_RS20310;Dbxref=Genbank:WP_002889733.1;Name=WP_002889733.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225276.1;locus_tag=NLI98_RS20310;product=xanthine phosphoribosyltransferase;protein_id=WP_002889733.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4180807 4182264 . + . ID=gene-NLI98_RS20315;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=NLI98_RS20315;old_locus_tag=NLI98_20310 NZ_CP100601.1 Protein Homology CDS 4180807 4182264 . + 0 ID=cds-WP_004152033.1;Parent=gene-NLI98_RS20315;Dbxref=Genbank:WP_004152033.1;Name=WP_004152033.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225275.1;locus_tag=NLI98_RS20315;product=cytosol nonspecific dipeptidase;protein_id=WP_004152033.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4182307 4182759 . - . ID=gene-NLI98_RS20320;Name=NLI98_RS20320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20320;old_locus_tag=NLI98_20315 NZ_CP100601.1 Protein Homology CDS 4182307 4182759 . - 0 ID=cds-WP_002889727.1;Parent=gene-NLI98_RS20320;Dbxref=Genbank:WP_002889727.1;Name=WP_002889727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225274.1;locus_tag=NLI98_RS20320;product=GNAT family N-acetyltransferase;protein_id=WP_002889727.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4182762 4183817 . - . ID=gene-NLI98_RS20325;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=NLI98_RS20325;old_locus_tag=NLI98_20320 NZ_CP100601.1 Protein Homology CDS 4182762 4183817 . - 0 ID=cds-WP_002889726.1;Parent=gene-NLI98_RS20325;Dbxref=Genbank:WP_002889726.1;Name=WP_002889726.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225273.1;locus_tag=NLI98_RS20325;product=DNA polymerase IV;protein_id=WP_002889726.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4183977 4184837 . + . ID=gene-NLI98_RS20330;Name=NLI98_RS20330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20330;old_locus_tag=NLI98_20325 NZ_CP100601.1 Protein Homology CDS 4183977 4184837 . + 0 ID=cds-WP_088498501.1;Parent=gene-NLI98_RS20330;Dbxref=Genbank:WP_088498501.1;Name=WP_088498501.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225272.1;locus_tag=NLI98_RS20330;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_088498501.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4185150 4185365 . - . ID=gene-NLI98_RS20335;Name=nqrM;gbkey=Gene;gene=nqrM;gene_biotype=protein_coding;locus_tag=NLI98_RS20335;old_locus_tag=NLI98_20330 NZ_CP100601.1 Protein Homology CDS 4185150 4185365 . - 0 ID=cds-WP_002889722.1;Parent=gene-NLI98_RS20335;Dbxref=Genbank:WP_002889722.1;Name=WP_002889722.1;gbkey=CDS;gene=nqrM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225271.1;locus_tag=NLI98_RS20335;product=(Na+)-NQR maturation NqrM;protein_id=WP_002889722.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4185368 4186591 . - . ID=gene-NLI98_RS20340;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=protein_coding;locus_tag=NLI98_RS20340;old_locus_tag=NLI98_20335 NZ_CP100601.1 Protein Homology CDS 4185368 4186591 . - 0 ID=cds-WP_088498500.1;Parent=gene-NLI98_RS20340;Dbxref=Genbank:WP_088498500.1;Name=WP_088498500.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrF;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225270.1;locus_tag=NLI98_RS20340;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=WP_088498500.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4186604 4187200 . - . ID=gene-NLI98_RS20345;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=NLI98_RS20345;old_locus_tag=NLI98_20340 NZ_CP100601.1 Protein Homology CDS 4186604 4187200 . - 0 ID=cds-WP_004177335.1;Parent=gene-NLI98_RS20345;Dbxref=Genbank:WP_004177335.1;Name=WP_004177335.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrE;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225269.1;locus_tag=NLI98_RS20345;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=WP_004177335.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4187207 4187845 . - . ID=gene-NLI98_RS20350;Name=NLI98_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20350;old_locus_tag=NLI98_20345 NZ_CP100601.1 Protein Homology CDS 4187207 4187845 . - 0 ID=cds-WP_002889716.1;Parent=gene-NLI98_RS20350;Dbxref=Genbank:WP_002889716.1;Name=WP_002889716.1;Ontology_term=GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225268.1;locus_tag=NLI98_RS20350;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=WP_002889716.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4187838 4188632 . - . ID=gene-NLI98_RS20355;Name=NLI98_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20355;old_locus_tag=NLI98_20350 NZ_CP100601.1 Protein Homology CDS 4187838 4188632 . - 0 ID=cds-WP_004177336.1;Parent=gene-NLI98_RS20355;Dbxref=Genbank:WP_004177336.1;Name=WP_004177336.1;Ontology_term=GO:0006814,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225267.1;locus_tag=NLI98_RS20355;product=Na(+)-translocating NADH-quinone reductase subunit C;protein_id=WP_004177336.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4188625 4189863 . - . ID=gene-NLI98_RS20360;Name=NLI98_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20360;old_locus_tag=NLI98_20355 NZ_CP100601.1 Protein Homology CDS 4188625 4189863 . - 0 ID=cds-WP_004147186.1;Parent=gene-NLI98_RS20360;Dbxref=Genbank:WP_004147186.1;Name=WP_004147186.1;Ontology_term=GO:0022904,GO:0055085,GO:0010181,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=respiratory electron transport chain|0022904||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225266.1;locus_tag=NLI98_RS20360;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=WP_004147186.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4189867 4191210 . - . ID=gene-NLI98_RS20365;Name=NLI98_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20365;old_locus_tag=NLI98_20360 NZ_CP100601.1 Protein Homology CDS 4189867 4191210 . - 0 ID=cds-WP_038432073.1;Parent=gene-NLI98_RS20365;Dbxref=Genbank:WP_038432073.1;Name=WP_038432073.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225265.1;locus_tag=NLI98_RS20365;product=Na(+)-translocating NADH-quinone reductase subunit A;protein_id=WP_038432073.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4191622 4192362 . + . ID=gene-NLI98_RS20370;Name=dpaA;gbkey=Gene;gene=dpaA;gene_biotype=protein_coding;locus_tag=NLI98_RS20370;old_locus_tag=NLI98_20365 NZ_CP100601.1 Protein Homology CDS 4191622 4192362 . + 0 ID=cds-WP_002889699.1;Parent=gene-NLI98_RS20370;Dbxref=Genbank:WP_002889699.1;Name=WP_002889699.1;gbkey=CDS;gene=dpaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225264.1;locus_tag=NLI98_RS20370;product=peptidoglycan meso-diaminopimelic acid protein amidase;protein_id=WP_002889699.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4192333 4193100 . - . ID=gene-NLI98_RS20375;Name=NLI98_RS20375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20375;old_locus_tag=NLI98_20370 NZ_CP100601.1 Protein Homology CDS 4192333 4193100 . - 0 ID=cds-WP_002889696.1;Parent=gene-NLI98_RS20375;Dbxref=Genbank:WP_002889696.1;Name=WP_002889696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225263.1;locus_tag=NLI98_RS20375;product=class II glutamine amidotransferase;protein_id=WP_002889696.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4193175 4193756 . - . ID=gene-NLI98_RS20380;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=NLI98_RS20380;old_locus_tag=NLI98_20375 NZ_CP100601.1 Protein Homology CDS 4193175 4193756 . - 0 ID=cds-WP_004145825.1;Parent=gene-NLI98_RS20380;Dbxref=Genbank:WP_004145825.1;Name=WP_004145825.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225262.1;locus_tag=NLI98_RS20380;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_004145825.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4193996 4196440 . + . ID=gene-NLI98_RS20385;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=NLI98_RS20385;old_locus_tag=NLI98_20380 NZ_CP100601.1 Protein Homology CDS 4193996 4196440 . + 0 ID=cds-WP_038432074.1;Parent=gene-NLI98_RS20385;Dbxref=Genbank:WP_038432074.1;Name=WP_038432074.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225261.1;locus_tag=NLI98_RS20385;product=acyl-CoA dehydrogenase FadE;protein_id=WP_038432074.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4196619 4197389 . + . ID=gene-NLI98_RS20390;Name=NLI98_RS20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20390;old_locus_tag=NLI98_20385 NZ_CP100601.1 Protein Homology CDS 4196619 4197389 . + 0 ID=cds-WP_002889689.1;Parent=gene-NLI98_RS20390;Dbxref=Genbank:WP_002889689.1;Name=WP_002889689.1;Ontology_term=GO:0006807;gbkey=CDS;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178673.1;locus_tag=NLI98_RS20390;product=amidohydrolase;protein_id=WP_002889689.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4197420 4198010 . - . ID=gene-NLI98_RS20395;Name=eamB;gbkey=Gene;gene=eamB;gene_biotype=protein_coding;locus_tag=NLI98_RS20395;old_locus_tag=NLI98_20390 NZ_CP100601.1 Protein Homology CDS 4197420 4198010 . - 0 ID=cds-WP_004178672.1;Parent=gene-NLI98_RS20395;Dbxref=Genbank:WP_004178672.1;Name=WP_004178672.1;gbkey=CDS;gene=eamB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225259.1;locus_tag=NLI98_RS20395;product=cysteine/O-acetylserine transporter;protein_id=WP_004178672.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4198114 4198995 . + . ID=gene-NLI98_RS20400;Name=NLI98_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20400;old_locus_tag=NLI98_20395 NZ_CP100601.1 Protein Homology CDS 4198114 4198995 . + 0 ID=cds-WP_088498499.1;Parent=gene-NLI98_RS20400;Dbxref=Genbank:WP_088498499.1;Name=WP_088498499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225258.1;locus_tag=NLI98_RS20400;product=LysR family transcriptional regulator;protein_id=WP_088498499.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4199055 4199131 . - . ID=gene-NLI98_RS20405;Name=NLI98_RS20405;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS20405;old_locus_tag=NLI98_20400 NZ_CP100601.1 tRNAscan-SE tRNA 4199055 4199131 . - . ID=rna-NLI98_RS20405;Parent=gene-NLI98_RS20405;anticodon=(pos:complement(4199095..4199097));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS20405;product=tRNA-Asp NZ_CP100601.1 tRNAscan-SE exon 4199055 4199131 . - . ID=exon-NLI98_RS20405-1;Parent=rna-NLI98_RS20405;anticodon=(pos:complement(4199095..4199097));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS20405;product=tRNA-Asp NZ_CP100601.1 RefSeq gene 4199265 4199996 . - . ID=gene-NLI98_RS20410;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=NLI98_RS20410;old_locus_tag=NLI98_20405 NZ_CP100601.1 Protein Homology CDS 4199265 4199996 . - 0 ID=cds-WP_004152034.1;Parent=gene-NLI98_RS20410;Dbxref=Genbank:WP_004152034.1;Name=WP_004152034.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225257.1;locus_tag=NLI98_RS20410;product=DNA polymerase III subunit epsilon;protein_id=WP_004152034.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4200061 4200528 . + . ID=gene-NLI98_RS20415;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=NLI98_RS20415;old_locus_tag=NLI98_20410 NZ_CP100601.1 Protein Homology CDS 4200061 4200528 . + 0 ID=cds-WP_002889686.1;Parent=gene-NLI98_RS20415;Dbxref=Genbank:WP_002889686.1;Name=WP_002889686.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225256.1;locus_tag=NLI98_RS20415;product=ribonuclease HI;protein_id=WP_002889686.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4200525 4201247 . - . ID=gene-NLI98_RS20420;Name=NLI98_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20420;old_locus_tag=NLI98_20415 NZ_CP100601.1 Protein Homology CDS 4200525 4201247 . - 0 ID=cds-WP_032419379.1;Parent=gene-NLI98_RS20420;Dbxref=Genbank:WP_032419379.1;Name=WP_032419379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008805254.1;locus_tag=NLI98_RS20420;product=class I SAM-dependent methyltransferase;protein_id=WP_032419379.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4201280 4202035 . + . ID=gene-NLI98_RS20425;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=NLI98_RS20425;old_locus_tag=NLI98_20420 NZ_CP100601.1 Protein Homology CDS 4201280 4202035 . + 0 ID=cds-WP_004145833.1;Parent=gene-NLI98_RS20425;Dbxref=Genbank:WP_004145833.1;Name=WP_004145833.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225254.1;locus_tag=NLI98_RS20425;product=hydroxyacylglutathione hydrolase;protein_id=WP_004145833.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4202107 4203474 . + . ID=gene-NLI98_RS20430;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=NLI98_RS20430;old_locus_tag=NLI98_20425 NZ_CP100601.1 Protein Homology CDS 4202107 4203474 . + 0 ID=cds-WP_002889632.1;Parent=gene-NLI98_RS20430;Dbxref=Genbank:WP_002889632.1;Name=WP_002889632.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459258.1;locus_tag=NLI98_RS20430;product=murein transglycosylase D;protein_id=WP_002889632.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4203532 4204302 . - . ID=gene-NLI98_RS20435;Name=NLI98_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20435;old_locus_tag=NLI98_20430 NZ_CP100601.1 Protein Homology CDS 4203532 4204302 . - 0 ID=cds-WP_002889630.1;Parent=gene-NLI98_RS20435;Dbxref=Genbank:WP_002889630.1;Name=WP_002889630.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225252.1;locus_tag=NLI98_RS20435;product=class I SAM-dependent methyltransferase;protein_id=WP_002889630.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4204394 4205191 . - . ID=gene-NLI98_RS20440;Name=NLI98_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20440;old_locus_tag=NLI98_20435 NZ_CP100601.1 Protein Homology CDS 4204394 4205191 . - 0 ID=cds-WP_002889629.1;Parent=gene-NLI98_RS20440;Dbxref=Genbank:WP_002889629.1;Name=WP_002889629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225251.1;locus_tag=NLI98_RS20440;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_002889629.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4205294 4206484 . - . ID=gene-NLI98_RS20445;Name=NLI98_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20445;old_locus_tag=NLI98_20440 NZ_CP100601.1 Protein Homology CDS 4205294 4206484 . - 0 ID=cds-WP_049000192.1;Parent=gene-NLI98_RS20445;Dbxref=Genbank:WP_049000192.1;Name=WP_049000192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225250.1;locus_tag=NLI98_RS20445;product=MFS transporter;protein_id=WP_049000192.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4206589 4207494 . + . ID=gene-NLI98_RS20450;Name=yafC;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=NLI98_RS20450;old_locus_tag=NLI98_20445 NZ_CP100601.1 Protein Homology CDS 4206589 4207494 . + 0 ID=cds-WP_002889616.1;Parent=gene-NLI98_RS20450;Dbxref=Genbank:WP_002889616.1;Name=WP_002889616.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yafC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225249.1;locus_tag=NLI98_RS20450;product=DNA-binding transcriptional regulator YafC;protein_id=WP_002889616.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4207540 4208343 . - . ID=gene-NLI98_RS20455;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=NLI98_RS20455;old_locus_tag=NLI98_20450 NZ_CP100601.1 Protein Homology CDS 4207540 4208343 . - 0 ID=cds-WP_049000189.1;Parent=gene-NLI98_RS20455;Dbxref=Genbank:WP_049000189.1;Name=WP_049000189.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225248.1;locus_tag=NLI98_RS20455;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_049000189.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4208508 4208584 . - . ID=gene-NLI98_RS20460;Name=NLI98_RS20460;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS20460;old_locus_tag=NLI98_20455 NZ_CP100601.1 tRNAscan-SE tRNA 4208508 4208584 . - . ID=rna-NLI98_RS20460;Parent=gene-NLI98_RS20460;anticodon=(pos:complement(4208548..4208550));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS20460;product=tRNA-Asp NZ_CP100601.1 tRNAscan-SE exon 4208508 4208584 . - . ID=exon-NLI98_RS20460-1;Parent=rna-NLI98_RS20460;anticodon=(pos:complement(4208548..4208550));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS20460;product=tRNA-Asp NZ_CP100601.1 RefSeq gene 4208642 4208757 . - . ID=gene-NLI98_RS20465;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NLI98_RS20465;old_locus_tag=NLI98_20460 NZ_CP100601.1 cmsearch rRNA 4208642 4208757 . - . ID=rna-NLI98_RS20465;Parent=gene-NLI98_RS20465;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS20465;product=5S ribosomal RNA NZ_CP100601.1 cmsearch exon 4208642 4208757 . - . ID=exon-NLI98_RS20465-1;Parent=rna-NLI98_RS20465;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS20465;product=5S ribosomal RNA NZ_CP100601.1 RefSeq gene 4208859 4211760 . - . ID=gene-NLI98_RS20470;Name=NLI98_RS20470;gbkey=Gene;gene_biotype=rRNA;locus_tag=NLI98_RS20470;old_locus_tag=NLI98_20465 NZ_CP100601.1 cmsearch rRNA 4208859 4211760 . - . ID=rna-NLI98_RS20470;Parent=gene-NLI98_RS20470;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS20470;product=23S ribosomal RNA NZ_CP100601.1 cmsearch exon 4208859 4211760 . - . ID=exon-NLI98_RS20470-1;Parent=rna-NLI98_RS20470;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS20470;product=23S ribosomal RNA NZ_CP100601.1 RefSeq gene 4211930 4212005 . - . ID=gene-NLI98_RS20475;Name=NLI98_RS20475;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS20475;old_locus_tag=NLI98_20470 NZ_CP100601.1 tRNAscan-SE tRNA 4211930 4212005 . - . ID=rna-NLI98_RS20475;Parent=gene-NLI98_RS20475;anticodon=(pos:complement(4211970..4211972));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS20475;product=tRNA-Ala NZ_CP100601.1 tRNAscan-SE exon 4211930 4212005 . - . ID=exon-NLI98_RS20475-1;Parent=rna-NLI98_RS20475;anticodon=(pos:complement(4211970..4211972));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS20475;product=tRNA-Ala NZ_CP100601.1 RefSeq gene 4212042 4212118 . - . ID=gene-NLI98_RS20480;Name=NLI98_RS20480;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS20480;old_locus_tag=NLI98_20475 NZ_CP100601.1 tRNAscan-SE tRNA 4212042 4212118 . - . ID=rna-NLI98_RS20480;Parent=gene-NLI98_RS20480;anticodon=(pos:complement(4212082..4212084));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS20480;product=tRNA-Ile NZ_CP100601.1 tRNAscan-SE exon 4212042 4212118 . - . ID=exon-NLI98_RS20480-1;Parent=rna-NLI98_RS20480;anticodon=(pos:complement(4212082..4212084));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS20480;product=tRNA-Ile NZ_CP100601.1 RefSeq gene 4212188 4213727 . - . ID=gene-NLI98_RS20485;Name=NLI98_RS20485;gbkey=Gene;gene_biotype=rRNA;locus_tag=NLI98_RS20485;old_locus_tag=NLI98_20480 NZ_CP100601.1 cmsearch rRNA 4212188 4213727 . - . ID=rna-NLI98_RS20485;Parent=gene-NLI98_RS20485;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS20485;product=16S ribosomal RNA NZ_CP100601.1 cmsearch exon 4212188 4213727 . - . ID=exon-NLI98_RS20485-1;Parent=rna-NLI98_RS20485;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS20485;product=16S ribosomal RNA NZ_CP100601.1 RefSeq gene 4214096 4214662 . - . ID=gene-NLI98_RS20490;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=NLI98_RS20490;old_locus_tag=NLI98_20485 NZ_CP100601.1 Protein Homology CDS 4214096 4214662 . - 0 ID=cds-WP_002889452.1;Parent=gene-NLI98_RS20490;Dbxref=Genbank:WP_002889452.1;Name=WP_002889452.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225247.1;locus_tag=NLI98_RS20490;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_002889452.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4214851 4215882 . + . ID=gene-NLI98_RS20495;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=NLI98_RS20495;old_locus_tag=NLI98_20490 NZ_CP100601.1 Protein Homology CDS 4214851 4215882 . + 0 ID=cds-WP_002889450.1;Parent=gene-NLI98_RS20495;Dbxref=Genbank:WP_002889450.1;Name=WP_002889450.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009898,GO:0055052;gbkey=CDS;gene=metN;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014168731.1;locus_tag=NLI98_RS20495;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_002889450.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4215875 4216528 . + . ID=gene-NLI98_RS20500;Name=NLI98_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20500;old_locus_tag=NLI98_20495 NZ_CP100601.1 Protein Homology CDS 4215875 4216528 . + 0 ID=cds-WP_002889448.1;Parent=gene-NLI98_RS20500;Dbxref=Genbank:WP_002889448.1;Name=WP_002889448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=NLI98_RS20500;product=methionine ABC transporter permease MetI;protein_id=WP_002889448.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4216572 4217387 . + . ID=gene-NLI98_RS20505;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=NLI98_RS20505;old_locus_tag=NLI98_20500 NZ_CP100601.1 Protein Homology CDS 4216572 4217387 . + 0 ID=cds-WP_002889445.1;Parent=gene-NLI98_RS20505;Dbxref=Genbank:WP_002889445.1;Name=WP_002889445.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016534993.1;locus_tag=NLI98_RS20505;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_002889445.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4217495 4217902 . + . ID=gene-NLI98_RS20510;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=NLI98_RS20510;old_locus_tag=NLI98_20505 NZ_CP100601.1 Protein Homology CDS 4217495 4217902 . + 0 ID=cds-WP_002889443.1;Parent=gene-NLI98_RS20510;Dbxref=Genbank:WP_002889443.1;Name=WP_002889443.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459248.1;locus_tag=NLI98_RS20510;product=Rcs stress response system protein RcsF;protein_id=WP_002889443.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4217899 4218606 . + . ID=gene-NLI98_RS20515;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=NLI98_RS20515;old_locus_tag=NLI98_20510 NZ_CP100601.1 Protein Homology CDS 4217899 4218606 . + 0 ID=cds-WP_002889441.1;Parent=gene-NLI98_RS20515;Dbxref=Genbank:WP_002889441.1;Name=WP_002889441.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225242.1;locus_tag=NLI98_RS20515;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_002889441.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4218718 4220436 . + . ID=gene-NLI98_RS20520;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=NLI98_RS20520;old_locus_tag=NLI98_20515 NZ_CP100601.1 Protein Homology CDS 4218718 4220436 . + 0 ID=cds-WP_004151928.1;Parent=gene-NLI98_RS20520;Dbxref=Genbank:WP_004151928.1;Name=WP_004151928.1;Ontology_term=GO:0006433,GO:0004827,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133963.1;locus_tag=NLI98_RS20520;product=proline--tRNA ligase;protein_id=WP_004151928.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4220495 4221337 . + . ID=gene-NLI98_RS20525;Name=NLI98_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20525;old_locus_tag=NLI98_20520 NZ_CP100601.1 Protein Homology CDS 4220495 4221337 . + 0 ID=cds-WP_004212714.1;Parent=gene-NLI98_RS20525;Dbxref=Genbank:WP_004212714.1;Name=WP_004212714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178659.1;locus_tag=NLI98_RS20525;product=YaeF family permuted papain-like enzyme;protein_id=WP_004212714.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4221469 4222167 . - . ID=gene-NLI98_RS20530;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=NLI98_RS20530;old_locus_tag=NLI98_20525 NZ_CP100601.1 Protein Homology CDS 4221469 4222167 . - 0 ID=cds-WP_002889435.1;Parent=gene-NLI98_RS20530;Dbxref=Genbank:WP_002889435.1;Name=WP_002889435.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002889435.1;locus_tag=NLI98_RS20530;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_002889435.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4222210 4222623 . - . ID=gene-NLI98_RS20535;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=NLI98_RS20535;old_locus_tag=NLI98_20530 NZ_CP100601.1 Protein Homology CDS 4222210 4222623 . - 0 ID=cds-WP_002889433.1;Parent=gene-NLI98_RS20535;Dbxref=Genbank:WP_002889433.1;Name=WP_002889433.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225238.1;locus_tag=NLI98_RS20535;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_002889433.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4222620 4223165 . - . ID=gene-NLI98_RS20540;Name=NLI98_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20540;old_locus_tag=NLI98_20535 NZ_CP100601.1 Protein Homology CDS 4222620 4223165 . - 0 ID=cds-WP_002889431.1;Parent=gene-NLI98_RS20540;Dbxref=Genbank:WP_002889431.1;Name=WP_002889431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225237.1;locus_tag=NLI98_RS20540;product=YaeQ family protein;protein_id=WP_002889431.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4223362 4223562 . + . ID=gene-NLI98_RS20545;Name=NLI98_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20545;old_locus_tag=NLI98_20540 NZ_CP100601.1 Protein Homology CDS 4223362 4223562 . + 0 ID=cds-WP_002889429.1;Parent=gene-NLI98_RS20545;Dbxref=Genbank:WP_002889429.1;Name=WP_002889429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133967.1;locus_tag=NLI98_RS20545;product=YaeP family protein;protein_id=WP_002889429.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4223549 4223809 . + . ID=gene-NLI98_RS20550;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=NLI98_RS20550;old_locus_tag=NLI98_20545 NZ_CP100601.1 Protein Homology CDS 4223549 4223809 . + 0 ID=cds-WP_002889424.1;Parent=gene-NLI98_RS20550;Dbxref=Genbank:WP_002889424.1;Name=WP_002889424.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225236.1;locus_tag=NLI98_RS20550;product=Rho-binding antiterminator;protein_id=WP_002889424.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4223823 4225136 . - . ID=gene-NLI98_RS20555;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=NLI98_RS20555;old_locus_tag=NLI98_20550 NZ_CP100601.1 Protein Homology CDS 4223823 4225136 . - 0 ID=cds-WP_094645110.1;Parent=gene-NLI98_RS20555;Dbxref=Genbank:WP_094645110.1;Name=WP_094645110.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225235.1;locus_tag=NLI98_RS20555;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_094645110.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4225190 4225579 . - . ID=gene-NLI98_RS20560;Name=NLI98_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20560;old_locus_tag=NLI98_20555 NZ_CP100601.1 Protein Homology CDS 4225190 4225579 . - 0 ID=cds-WP_004894112.1;Parent=gene-NLI98_RS20560;Dbxref=Genbank:WP_004894112.1;Name=WP_004894112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225234.1;locus_tag=NLI98_RS20560;product=VOC family protein;protein_id=WP_004894112.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4225626 4227779 . - . ID=gene-NLI98_RS20565;Name=NLI98_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20565;old_locus_tag=NLI98_20560 NZ_CP100601.1 Protein Homology CDS 4225626 4227779 . - 0 ID=cds-WP_088498431.1;Parent=gene-NLI98_RS20565;Dbxref=Genbank:WP_088498431.1;Name=WP_088498431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204462.1;locus_tag=NLI98_RS20565;product=lysine decarboxylase LdcC;protein_id=WP_088498431.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4227893 4228852 . - . ID=gene-NLI98_RS20570;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=NLI98_RS20570;old_locus_tag=NLI98_20565 NZ_CP100601.1 Protein Homology CDS 4227893 4228852 . - 0 ID=cds-WP_004145855.1;Parent=gene-NLI98_RS20570;Dbxref=Genbank:WP_004145855.1;Name=WP_004145855.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132091.1;locus_tag=NLI98_RS20570;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_004145855.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4228865 4232347 . - . ID=gene-NLI98_RS20575;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=NLI98_RS20575;old_locus_tag=NLI98_20570 NZ_CP100601.1 Protein Homology CDS 4228865 4232347 . - 0 ID=cds-WP_088498423.1;Parent=gene-NLI98_RS20575;Dbxref=Genbank:WP_088498423.1;Name=WP_088498423.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225231.1;locus_tag=NLI98_RS20575;product=DNA polymerase III subunit alpha;protein_id=WP_088498423.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4232365 4232964 . - . ID=gene-NLI98_RS20580;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=NLI98_RS20580;old_locus_tag=NLI98_20575 NZ_CP100601.1 Protein Homology CDS 4232365 4232964 . - 0 ID=cds-WP_088498424.1;Parent=gene-NLI98_RS20580;Dbxref=Genbank:WP_088498424.1;Name=WP_088498424.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225230.1;locus_tag=NLI98_RS20580;product=ribonuclease HII;protein_id=WP_088498424.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4232961 4234112 . - . ID=gene-NLI98_RS20585;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=NLI98_RS20585;old_locus_tag=NLI98_20580 NZ_CP100601.1 Protein Homology CDS 4232961 4234112 . - 0 ID=cds-WP_004178649.1;Parent=gene-NLI98_RS20585;Dbxref=Genbank:WP_004178649.1;Name=WP_004178649.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225229.1;locus_tag=NLI98_RS20585;product=lipid-A-disaccharide synthase;protein_id=WP_004178649.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4234112 4234900 . - . ID=gene-NLI98_RS20590;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=NLI98_RS20590;old_locus_tag=NLI98_20585 NZ_CP100601.1 Protein Homology CDS 4234112 4234900 . - 0 ID=cds-WP_004178647.1;Parent=gene-NLI98_RS20590;Dbxref=Genbank:WP_004178647.1;Name=WP_004178647.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=NLI98_RS20590;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_004178647.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4234904 4235359 . - . ID=gene-NLI98_RS20595;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=NLI98_RS20595;old_locus_tag=NLI98_20590 NZ_CP100601.1 Protein Homology CDS 4234904 4235359 . - 0 ID=cds-WP_004145858.1;Parent=gene-NLI98_RS20595;Dbxref=Genbank:WP_004145858.1;Name=WP_004145858.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000210741.1;locus_tag=NLI98_RS20595;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_004145858.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4235465 4236490 . - . ID=gene-NLI98_RS20600;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=NLI98_RS20600;old_locus_tag=NLI98_20595 NZ_CP100601.1 Protein Homology CDS 4235465 4236490 . - 0 ID=cds-WP_002889327.1;Parent=gene-NLI98_RS20600;Dbxref=Genbank:WP_002889327.1;Name=WP_002889327.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132101.1;locus_tag=NLI98_RS20600;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_002889327.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4236494 4236979 . - . ID=gene-NLI98_RS20605;Name=skp;gbkey=Gene;gene=skp;gene_biotype=protein_coding;gene_synonym=hlpA,ompH;locus_tag=NLI98_RS20605;old_locus_tag=NLI98_20600 NZ_CP100601.1 Protein Homology CDS 4236494 4236979 . - 0 ID=cds-WP_004178645.1;Parent=gene-NLI98_RS20605;Dbxref=Genbank:WP_004178645.1;Name=WP_004178645.1;gbkey=CDS;gene=skp;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225225.1;locus_tag=NLI98_RS20605;product=molecular chaperone Skp;protein_id=WP_004178645.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4237101 4239530 . - . ID=gene-NLI98_RS20610;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=NLI98_RS20610;old_locus_tag=NLI98_20605 NZ_CP100601.1 Protein Homology CDS 4237101 4239530 . - 0 ID=cds-WP_004145860.1;Parent=gene-NLI98_RS20610;Dbxref=Genbank:WP_004145860.1;Name=WP_004145860.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225224.1;locus_tag=NLI98_RS20610;product=outer membrane protein assembly factor BamA;protein_id=WP_004145860.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4239562 4240914 . - . ID=gene-NLI98_RS20615;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=NLI98_RS20615;old_locus_tag=NLI98_20610 NZ_CP100601.1 Protein Homology CDS 4239562 4240914 . - 0 ID=cds-WP_004177358.1;Parent=gene-NLI98_RS20615;Dbxref=Genbank:WP_004177358.1;Name=WP_004177358.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225223.1;locus_tag=NLI98_RS20615;product=sigma E protease regulator RseP;protein_id=WP_004177358.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4240926 4241783 . - . ID=gene-NLI98_RS20620;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=NLI98_RS20620;old_locus_tag=NLI98_20615 NZ_CP100601.1 Protein Homology CDS 4240926 4241783 . - 0 ID=cds-WP_002889318.1;Parent=gene-NLI98_RS20620;Dbxref=Genbank:WP_002889318.1;Name=WP_002889318.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225222.1;locus_tag=NLI98_RS20620;product=phosphatidate cytidylyltransferase;protein_id=WP_002889318.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4241796 4242554 . - . ID=gene-NLI98_RS20625;Name=ispU;gbkey=Gene;gene=ispU;gene_biotype=protein_coding;gene_synonym=uppS;locus_tag=NLI98_RS20625;old_locus_tag=NLI98_20620 NZ_CP100601.1 Protein Homology CDS 4241796 4242554 . - 0 ID=cds-WP_002889316.1;Parent=gene-NLI98_RS20625;Dbxref=Genbank:WP_002889316.1;Name=WP_002889316.1;Ontology_term=GO:0043164,GO:0002094,GO:0008834;gbkey=CDS;gene=ispU;go_function=polyprenyltransferase activity|0002094||IEA,di-trans%2Cpoly-cis-decaprenylcistransferase activity|0008834||IEA;go_process=Gram-negative-bacterium-type cell wall biogenesis|0043164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002889316.1;locus_tag=NLI98_RS20625;product=(2E%2C6E)-farnesyl-diphosphate-specific ditrans%2Cpolycis-undecaprenyl-diphosphate synthase;protein_id=WP_002889316.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4242792 4243994 . - . ID=gene-NLI98_RS20630;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=NLI98_RS20630;old_locus_tag=NLI98_20625 NZ_CP100601.1 Protein Homology CDS 4242792 4243994 . - 0 ID=cds-WP_004178642.1;Parent=gene-NLI98_RS20630;Dbxref=Genbank:WP_004178642.1;Name=WP_004178642.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225220.1;locus_tag=NLI98_RS20630;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_004178642.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4244223 4244780 . - . ID=gene-NLI98_RS20635;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=NLI98_RS20635;old_locus_tag=NLI98_20630 NZ_CP100601.1 Protein Homology CDS 4244223 4244780 . - 0 ID=cds-WP_002889308.1;Parent=gene-NLI98_RS20635;Dbxref=Genbank:WP_002889308.1;Name=WP_002889308.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000622421.1;locus_tag=NLI98_RS20635;product=ribosome recycling factor;protein_id=WP_002889308.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4244931 4245656 . - . ID=gene-NLI98_RS20640;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=NLI98_RS20640;old_locus_tag=NLI98_20635 NZ_CP100601.1 Protein Homology CDS 4244931 4245656 . - 0 ID=cds-WP_002889306.1;Parent=gene-NLI98_RS20640;Dbxref=Genbank:WP_002889306.1;Name=WP_002889306.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000224576.1;locus_tag=NLI98_RS20640;product=UMP kinase;protein_id=WP_002889306.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4245807 4246658 . - . ID=gene-NLI98_RS20645;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=NLI98_RS20645;old_locus_tag=NLI98_20640 NZ_CP100601.1 Protein Homology CDS 4245807 4246658 . - 0 ID=cds-WP_004151930.1;Parent=gene-NLI98_RS20645;Dbxref=Genbank:WP_004151930.1;Name=WP_004151930.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132116.1;locus_tag=NLI98_RS20645;product=translation elongation factor Ts;protein_id=WP_004151930.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4246778 4247503 . - . ID=gene-NLI98_RS20650;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=NLI98_RS20650;old_locus_tag=NLI98_20645 NZ_CP100601.1 Protein Homology CDS 4246778 4247503 . - 0 ID=cds-WP_002889299.1;Parent=gene-NLI98_RS20650;Dbxref=Genbank:WP_002889299.1;Name=WP_002889299.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=NLI98_RS20650;product=30S ribosomal protein S2;protein_id=WP_002889299.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4247826 4248620 . + . ID=gene-NLI98_RS20655;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=NLI98_RS20655;old_locus_tag=NLI98_20650 NZ_CP100601.1 Protein Homology CDS 4247826 4248620 . + 0 ID=cds-WP_004177362.1;Parent=gene-NLI98_RS20655;Dbxref=Genbank:WP_004177362.1;Name=WP_004177362.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225215.1;locus_tag=NLI98_RS20655;product=type I methionyl aminopeptidase;protein_id=WP_004177362.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4248678 4251341 . + . ID=gene-NLI98_RS20660;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=NLI98_RS20660;old_locus_tag=NLI98_20655 NZ_CP100601.1 Protein Homology CDS 4248678 4251341 . + 0 ID=cds-WP_004151931.1;Parent=gene-NLI98_RS20660;Dbxref=Genbank:WP_004151931.1;Name=WP_004151931.1;Ontology_term=GO:0006807,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017144947.1;locus_tag=NLI98_RS20660;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_004151931.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4251372 4252196 . + . ID=gene-NLI98_RS20665;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=NLI98_RS20665;old_locus_tag=NLI98_20660 NZ_CP100601.1 Protein Homology CDS 4251372 4252196 . + 0 ID=cds-WP_002889295.1;Parent=gene-NLI98_RS20665;Dbxref=Genbank:WP_002889295.1;Name=WP_002889295.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=NLI98_RS20665;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_002889295.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4252304 4252690 . + . ID=gene-NLI98_RS20670;Name=NLI98_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20670;old_locus_tag=NLI98_20665 NZ_CP100601.1 Protein Homology CDS 4252304 4252690 . + 0 ID=cds-WP_002889292.1;Parent=gene-NLI98_RS20670;Dbxref=Genbank:WP_002889292.1;Name=WP_002889292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000272186.1;locus_tag=NLI98_RS20670;product=DUF3461 family protein;protein_id=WP_002889292.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4252809 4253966 . - . ID=gene-NLI98_RS20675;Name=cdaR;gbkey=Gene;gene=cdaR;gene_biotype=protein_coding;locus_tag=NLI98_RS20675;old_locus_tag=NLI98_20670 NZ_CP100601.1 Protein Homology CDS 4252809 4253966 . - 0 ID=cds-WP_002889289.1;Parent=gene-NLI98_RS20675;Dbxref=Genbank:WP_002889289.1;Name=WP_002889289.1;gbkey=CDS;gene=cdaR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459215.1;locus_tag=NLI98_RS20675;product=DNA-binding transcriptional regulator CdaR;protein_id=WP_002889289.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4254133 4255566 . - . ID=gene-NLI98_RS20680;Name=degP;gbkey=Gene;gene=degP;gene_biotype=protein_coding;locus_tag=NLI98_RS20680;old_locus_tag=NLI98_20675 NZ_CP100601.1 Protein Homology CDS 4254133 4255566 . - 0 ID=cds-WP_004145870.1;Parent=gene-NLI98_RS20680;Dbxref=Genbank:WP_004145870.1;Name=WP_004145870.1;gbkey=CDS;gene=degP;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459214.1;locus_tag=NLI98_RS20680;product=serine endoprotease DegP;protein_id=WP_004145870.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4255701 4257215 . - . ID=gene-NLI98_RS20685;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=NLI98_RS20685;old_locus_tag=NLI98_20680 NZ_CP100601.1 Protein Homology CDS 4255701 4257215 . - 0 ID=cds-WP_004145871.1;Parent=gene-NLI98_RS20685;Dbxref=Genbank:WP_004145871.1;Name=WP_004145871.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225209.1;locus_tag=NLI98_RS20685;product=dGTPase;protein_id=WP_004145871.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4257299 4257997 . + . ID=gene-NLI98_RS20690;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=NLI98_RS20690;old_locus_tag=NLI98_20685 NZ_CP100601.1 Protein Homology CDS 4257299 4257997 . + 0 ID=cds-WP_064156183.1;Parent=gene-NLI98_RS20690;Dbxref=Genbank:WP_064156183.1;Name=WP_064156183.1;Ontology_term=GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225208.1;locus_tag=NLI98_RS20690;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_064156183.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4257990 4258790 . + . ID=gene-NLI98_RS20695;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=NLI98_RS20695;old_locus_tag=NLI98_20690 NZ_CP100601.1 Protein Homology CDS 4257990 4258790 . + 0 ID=cds-WP_002889279.1;Parent=gene-NLI98_RS20695;Dbxref=Genbank:WP_002889279.1;Name=WP_002889279.1;Ontology_term=GO:0005524;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225207.1;locus_tag=NLI98_RS20695;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_002889279.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4258827 4259450 . + . ID=gene-NLI98_RS20700;Name=NLI98_RS20700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20700;old_locus_tag=NLI98_20695 NZ_CP100601.1 Protein Homology CDS 4258827 4259450 . + 0 ID=cds-WP_048265190.1;Parent=gene-NLI98_RS20700;Dbxref=Genbank:WP_048265190.1;Name=WP_048265190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225206.1;locus_tag=NLI98_RS20700;product=TRIC cation channel family protein;protein_id=WP_048265190.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4259522 4259866 . - . ID=gene-NLI98_RS20705;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=NLI98_RS20705;old_locus_tag=NLI98_20700 NZ_CP100601.1 Protein Homology CDS 4259522 4259866 . - 0 ID=cds-WP_002889275.1;Parent=gene-NLI98_RS20705;Dbxref=Genbank:WP_002889275.1;Name=WP_002889275.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=NLI98_RS20705;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_002889275.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4259948 4261366 . - . ID=gene-NLI98_RS20710;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=NLI98_RS20710;old_locus_tag=NLI98_20705 NZ_CP100601.1 Protein Homology CDS 4259948 4261366 . - 0 ID=cds-WP_004151932.1;Parent=gene-NLI98_RS20710;Dbxref=Genbank:WP_004151932.1;Name=WP_004151932.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459208.1;locus_tag=NLI98_RS20710;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_004151932.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4261547 4262827 . + . ID=gene-NLI98_RS20715;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=NLI98_RS20715;old_locus_tag=NLI98_20710 NZ_CP100601.1 Protein Homology CDS 4261547 4262827 . + 0 ID=cds-WP_002889272.1;Parent=gene-NLI98_RS20715;Dbxref=Genbank:WP_002889272.1;Name=WP_002889272.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233394.1;locus_tag=NLI98_RS20715;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_002889272.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4262964 4264946 . - . ID=gene-NLI98_RS20720;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=NLI98_RS20720;old_locus_tag=NLI98_20715 NZ_CP100601.1 Protein Homology CDS 4262964 4264946 . - 0 ID=cds-WP_088498425.1;Parent=gene-NLI98_RS20720;Dbxref=Genbank:WP_088498425.1;Name=WP_088498425.1;Ontology_term=GO:0022857;gbkey=CDS;gene=fhuB;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225202.1;locus_tag=NLI98_RS20720;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_088498425.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4264943 4265833 . - . ID=gene-NLI98_RS20725;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=NLI98_RS20725;old_locus_tag=NLI98_20720 NZ_CP100601.1 Protein Homology CDS 4264943 4265833 . - 0 ID=cds-WP_004147133.1;Parent=gene-NLI98_RS20725;Dbxref=Genbank:WP_004147133.1;Name=WP_004147133.1;gbkey=CDS;gene=fhuD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225201.1;locus_tag=NLI98_RS20725;product=Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;protein_id=WP_004147133.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4265833 4266630 . - . ID=gene-NLI98_RS20730;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=NLI98_RS20730;old_locus_tag=NLI98_20725 NZ_CP100601.1 Protein Homology CDS 4265833 4266630 . - 0 ID=cds-WP_004145876.1;Parent=gene-NLI98_RS20730;Dbxref=Genbank:WP_004145876.1;Name=WP_004145876.1;Ontology_term=GO:0005524;gbkey=CDS;gene=fhuC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225200.1;locus_tag=NLI98_RS20730;product=Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC;protein_id=WP_004145876.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4266676 4268883 . - . ID=gene-NLI98_RS20735;Name=fhuA;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=NLI98_RS20735;old_locus_tag=NLI98_20730 NZ_CP100601.1 Protein Homology CDS 4266676 4268883 . - 0 ID=cds-WP_004178624.1;Parent=gene-NLI98_RS20735;Dbxref=Genbank:WP_004178624.1;Name=WP_004178624.1;Ontology_term=GO:0015891,GO:0015344,GO:0038023,GO:0009279;gbkey=CDS;gene=fhuA;go_component=cell outer membrane|0009279||IEA;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204430.1;locus_tag=NLI98_RS20735;product=ferrichrome porin FhuA;protein_id=WP_004178624.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4269118 4271670 . - . ID=gene-NLI98_RS20740;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=NLI98_RS20740;old_locus_tag=NLI98_20735 NZ_CP100601.1 Protein Homology CDS 4269118 4271670 . - 0 ID=cds-WP_002889208.1;Parent=gene-NLI98_RS20740;Dbxref=Genbank:WP_002889208.1;Name=WP_002889208.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225197.1;locus_tag=NLI98_RS20740;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_002889208.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4272061 4272195 . + . ID=gene-NLI98_RS20745;Name=NLI98_RS20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20745;old_locus_tag=NLI98_20740 NZ_CP100601.1 Protein Homology CDS 4272061 4272195 . + 0 ID=cds-WP_004147125.1;Parent=gene-NLI98_RS20745;Dbxref=Genbank:WP_004147125.1;Name=WP_004147125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225195.1;locus_tag=NLI98_RS20745;product=hypothetical protein;protein_id=WP_004147125.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4272258 4272632 . + . ID=gene-NLI98_RS20750;Name=gspS;gbkey=Gene;gene=gspS;gene_biotype=protein_coding;locus_tag=NLI98_RS20750;old_locus_tag=NLI98_20745 NZ_CP100601.1 Protein Homology CDS 4272258 4272632 . + 0 ID=cds-WP_032409075.1;Parent=gene-NLI98_RS20750;Dbxref=Genbank:WP_032409075.1;Name=WP_032409075.1;gbkey=CDS;gene=gspS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160317.1;locus_tag=NLI98_RS20750;product=type II secretion system pilot lipoprotein GspS;protein_id=WP_032409075.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4272671 4273228 . - . ID=gene-NLI98_RS20755;Name=gspB;gbkey=Gene;gene=gspB;gene_biotype=protein_coding;locus_tag=NLI98_RS20755;old_locus_tag=NLI98_20750 NZ_CP100601.1 Protein Homology CDS 4272671 4273228 . - 0 ID=cds-WP_088498426.1;Parent=gene-NLI98_RS20755;Dbxref=Genbank:WP_088498426.1;Name=WP_088498426.1;gbkey=CDS;gene=gspB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225193.1;locus_tag=NLI98_RS20755;product=type II secretion system assembly factor GspB;protein_id=WP_088498426.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4273485 4276793 . - . ID=gene-NLI98_RS20760;Name=pulA;gbkey=Gene;gene=pulA;gene_biotype=protein_coding;locus_tag=NLI98_RS20760;old_locus_tag=NLI98_20755 NZ_CP100601.1 Protein Homology CDS 4273485 4276793 . - 0 ID=cds-WP_088498427.1;Parent=gene-NLI98_RS20760;Dbxref=Genbank:WP_088498427.1;Name=WP_088498427.1;Ontology_term=GO:0005983,GO:0051678,GO:0051060;gbkey=CDS;gene=pulA;go_function=pullulanase activity|0051060||IEA;go_process=starch catabolic process|0005983||IEA,pullulan catabolic process|0051678||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160315.1;locus_tag=NLI98_RS20760;product=pullulanase-type alpha-1%2C6-glucosidase;protein_id=WP_088498427.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4276978 4277115 . + . ID=gene-NLI98_RS20765;Name=NLI98_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20765;old_locus_tag=NLI98_20760 NZ_CP100601.1 Protein Homology CDS 4276978 4277115 . + 0 ID=cds-WP_004219434.1;Parent=gene-NLI98_RS20765;Dbxref=Genbank:WP_004219434.1;Name=WP_004219434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225189.1;locus_tag=NLI98_RS20765;product=hypothetical protein;protein_id=WP_004219434.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4277100 4277942 . + . ID=gene-NLI98_RS20770;Name=gspC;gbkey=Gene;gene=gspC;gene_biotype=protein_coding;locus_tag=NLI98_RS20770;old_locus_tag=NLI98_20765 NZ_CP100601.1 Protein Homology CDS 4277100 4277942 . + 0 ID=cds-WP_032420895.1;Parent=gene-NLI98_RS20770;Dbxref=Genbank:WP_032420895.1;Name=WP_032420895.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspC;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225188.1;locus_tag=NLI98_RS20770;product=type II secretion system protein GspC;protein_id=WP_032420895.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4277952 4279925 . + . ID=gene-NLI98_RS20775;Name=pulD;gbkey=Gene;gene=pulD;gene_biotype=protein_coding;gene_synonym=gspD;locus_tag=NLI98_RS20775;old_locus_tag=NLI98_20770 NZ_CP100601.1 Protein Homology CDS 4277952 4279925 . + 0 ID=cds-WP_088498428.1;Parent=gene-NLI98_RS20775;Dbxref=Genbank:WP_088498428.1;Name=WP_088498428.1;gbkey=CDS;gene=pulD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225187.1;locus_tag=NLI98_RS20775;product=GspD family T2SS secretin variant PulD;protein_id=WP_088498428.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4279922 4281415 . + . ID=gene-NLI98_RS20780;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=NLI98_RS20780;old_locus_tag=NLI98_20775 NZ_CP100601.1 Protein Homology CDS 4279922 4281415 . + 0 ID=cds-WP_004145888.1;Parent=gene-NLI98_RS20780;Dbxref=Genbank:WP_004145888.1;Name=WP_004145888.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225186.1;locus_tag=NLI98_RS20780;product=type II secretion system ATPase GspE;protein_id=WP_004145888.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4281417 4282631 . + . ID=gene-NLI98_RS20785;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=NLI98_RS20785;old_locus_tag=NLI98_20780 NZ_CP100601.1 Protein Homology CDS 4281417 4282631 . + 0 ID=cds-WP_004177382.1;Parent=gene-NLI98_RS20785;Dbxref=Genbank:WP_004177382.1;Name=WP_004177382.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225185.1;locus_tag=NLI98_RS20785;product=type II secretion system inner membrane protein GspF;protein_id=WP_004177382.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4282652 4283074 . + . ID=gene-NLI98_RS20790;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=NLI98_RS20790;old_locus_tag=NLI98_20785 NZ_CP100601.1 Protein Homology CDS 4282652 4283074 . + 0 ID=cds-WP_002889054.1;Parent=gene-NLI98_RS20790;Dbxref=Genbank:WP_002889054.1;Name=WP_002889054.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225184.1;locus_tag=NLI98_RS20790;product=type II secretion system major pseudopilin GspG;protein_id=WP_002889054.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4283074 4283589 . + . ID=gene-NLI98_RS20795;Name=gspH;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;locus_tag=NLI98_RS20795;old_locus_tag=NLI98_20790 NZ_CP100601.1 Protein Homology CDS 4283074 4283589 . + 0 ID=cds-WP_004191951.1;Parent=gene-NLI98_RS20795;Dbxref=Genbank:WP_004191951.1;Name=WP_004191951.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspH;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225183.1;locus_tag=NLI98_RS20795;product=type II secretion system minor pseudopilin GspH;protein_id=WP_004191951.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4283586 4283951 . + . ID=gene-NLI98_RS20800;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=NLI98_RS20800;old_locus_tag=NLI98_20795 NZ_CP100601.1 Protein Homology CDS 4283586 4283951 . + 0 ID=cds-WP_002889025.1;Parent=gene-NLI98_RS20800;Dbxref=Genbank:WP_002889025.1;Name=WP_002889025.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225182.1;locus_tag=NLI98_RS20800;product=type II secretion system minor pseudopilin GspI;protein_id=WP_002889025.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4283948 4284544 . + . ID=gene-NLI98_RS20805;Name=gspJ;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=NLI98_RS20805;old_locus_tag=NLI98_20800 NZ_CP100601.1 Protein Homology CDS 4283948 4284544 . + 0 ID=cds-WP_023342989.1;Parent=gene-NLI98_RS20805;Dbxref=Genbank:WP_023342989.1;Name=WP_023342989.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspJ;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225181.1;locus_tag=NLI98_RS20805;product=type II secretion system minor pseudopilin GspJ;protein_id=WP_023342989.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4284541 4285527 . + . ID=gene-NLI98_RS20810;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=NLI98_RS20810;old_locus_tag=NLI98_20805 NZ_CP100601.1 Protein Homology CDS 4284541 4285527 . + 0 ID=cds-WP_077256163.1;Parent=gene-NLI98_RS20810;Dbxref=Genbank:WP_077256163.1;Name=WP_077256163.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004894165.1;locus_tag=NLI98_RS20810;product=type II secretion system minor pseudopilin GspK;protein_id=WP_077256163.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4285514 4286707 . + . ID=gene-NLI98_RS20815;Name=gspL;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=NLI98_RS20815;old_locus_tag=NLI98_20810 NZ_CP100601.1 Protein Homology CDS 4285514 4286707 . + 0 ID=cds-WP_088498429.1;Parent=gene-NLI98_RS20815;Dbxref=Genbank:WP_088498429.1;Name=WP_088498429.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspL;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225179.1;locus_tag=NLI98_RS20815;product=type II secretion system protein GspL;protein_id=WP_088498429.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4286700 4287185 . + . ID=gene-NLI98_RS20820;Name=NLI98_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20820;old_locus_tag=NLI98_20815 NZ_CP100601.1 Protein Homology CDS 4286700 4287185 . + 0 ID=cds-WP_058229142.1;Parent=gene-NLI98_RS20820;Dbxref=Genbank:WP_058229142.1;Name=WP_058229142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225178.1;locus_tag=NLI98_RS20820;product=type II secretion system protein M;protein_id=WP_058229142.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4287175 4287921 . + . ID=gene-NLI98_RS20825;Name=NLI98_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20825;old_locus_tag=NLI98_20820 NZ_CP100601.1 Protein Homology CDS 4287175 4287921 . + 0 ID=cds-WP_031588870.1;Parent=gene-NLI98_RS20825;Dbxref=Genbank:WP_031588870.1;Name=WP_031588870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225177.1;locus_tag=NLI98_RS20825;product=type II secretion system protein N;protein_id=WP_031588870.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4287918 4288718 . + . ID=gene-NLI98_RS20830;Name=NLI98_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20830;old_locus_tag=NLI98_20825 NZ_CP100601.1 Protein Homology CDS 4287918 4288718 . + 0 ID=cds-WP_004191960.1;Parent=gene-NLI98_RS20830;Dbxref=Genbank:WP_004191960.1;Name=WP_004191960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225176.1;locus_tag=NLI98_RS20830;product=A24 family peptidase;protein_id=WP_004191960.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4288766 4291195 . - . ID=gene-NLI98_RS20835;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=NLI98_RS20835;old_locus_tag=NLI98_20830 NZ_CP100601.1 Protein Homology CDS 4288766 4291195 . - 0 ID=cds-WP_004177388.1;Parent=gene-NLI98_RS20835;Dbxref=Genbank:WP_004177388.1;Name=WP_004177388.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225175.1;locus_tag=NLI98_RS20835;product=ATP-dependent helicase HrpB;protein_id=WP_004177388.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4291268 4291804 . + . ID=gene-NLI98_RS20840;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=NLI98_RS20840;old_locus_tag=NLI98_20835 NZ_CP100601.1 Protein Homology CDS 4291268 4291804 . + 0 ID=cds-WP_004177389.1;Parent=gene-NLI98_RS20840;Dbxref=Genbank:WP_004177389.1;Name=WP_004177389.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;gene=thpR;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,2'-5'-RNA ligase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225174.1;locus_tag=NLI98_RS20840;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_004177389.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4291804 4292520 . + . ID=gene-NLI98_RS20845;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=NLI98_RS20845;old_locus_tag=NLI98_20840 NZ_CP100601.1 Protein Homology CDS 4291804 4292520 . + 0 ID=cds-WP_002888848.1;Parent=gene-NLI98_RS20845;Dbxref=Genbank:WP_002888848.1;Name=WP_002888848.1;Ontology_term=GO:0000023,GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;go_process=maltose metabolic process|0000023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225173.1;locus_tag=NLI98_RS20845;product=DNA/RNA nuclease SfsA;protein_id=WP_002888848.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4292683 4293138 . + . ID=gene-NLI98_RS20850;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=NLI98_RS20850;old_locus_tag=NLI98_20845 NZ_CP100601.1 Protein Homology CDS 4292683 4293138 . + 0 ID=cds-WP_002888845.1;Parent=gene-NLI98_RS20850;Dbxref=Genbank:WP_002888845.1;Name=WP_002888845.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=NLI98_RS20850;product=RNA polymerase-binding protein DksA;protein_id=WP_002888845.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4293198 4294079 . + . ID=gene-NLI98_RS20855;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=NLI98_RS20855;old_locus_tag=NLI98_20850 NZ_CP100601.1 Protein Homology CDS 4293198 4294079 . + 0 ID=cds-WP_004145903.1;Parent=gene-NLI98_RS20855;Dbxref=Genbank:WP_004145903.1;Name=WP_004145903.1;Ontology_term=GO:0006400,GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA modification|0006400||IEA,tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225171.1;locus_tag=NLI98_RS20855;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_004145903.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4294142 4295536 . + . ID=gene-NLI98_RS20860;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=NLI98_RS20860;old_locus_tag=NLI98_20855 NZ_CP100601.1 Protein Homology CDS 4294142 4295536 . + 0 ID=cds-WP_071526609.1;Parent=gene-NLI98_RS20860;Dbxref=Genbank:WP_071526609.1;Name=WP_071526609.1;Ontology_term=GO:0006378,GO:0003723,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414685.4;locus_tag=NLI98_RS20860;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_071526609.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4295533 4296012 . + . ID=gene-NLI98_RS20865;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=NLI98_RS20865;old_locus_tag=NLI98_20860 NZ_CP100601.1 Protein Homology CDS 4295533 4296012 . + 0 ID=cds-WP_004894185.1;Parent=gene-NLI98_RS20865;Dbxref=Genbank:WP_004894185.1;Name=WP_004894185.1;gbkey=CDS;gene=folK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225169.1;locus_tag=NLI98_RS20865;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_004894185.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4296133 4296924 . + . ID=gene-NLI98_RS20870;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=NLI98_RS20870;old_locus_tag=NLI98_20865 NZ_CP100601.1 Protein Homology CDS 4296133 4296924 . + 0 ID=cds-WP_002888841.1;Parent=gene-NLI98_RS20870;Dbxref=Genbank:WP_002888841.1;Name=WP_002888841.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000805487.1;locus_tag=NLI98_RS20870;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_002888841.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4296936 4297790 . + . ID=gene-NLI98_RS20875;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=NLI98_RS20875;old_locus_tag=NLI98_20870 NZ_CP100601.1 Protein Homology CDS 4296936 4297790 . + 0 ID=cds-WP_002888835.1;Parent=gene-NLI98_RS20875;Dbxref=Genbank:WP_002888835.1;Name=WP_002888835.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225167.1;locus_tag=NLI98_RS20875;product=pantoate--beta-alanine ligase;protein_id=WP_002888835.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4297883 4298263 . + . ID=gene-NLI98_RS20880;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=NLI98_RS20880;old_locus_tag=NLI98_20875 NZ_CP100601.1 Protein Homology CDS 4297883 4298263 . + 0 ID=cds-WP_002888834.1;Parent=gene-NLI98_RS20880;Dbxref=Genbank:WP_002888834.1;Name=WP_002888834.1;Ontology_term=GO:0015940,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124704.1;locus_tag=NLI98_RS20880;product=aspartate 1-decarboxylase;protein_id=WP_002888834.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4298299 4299552 . - . ID=gene-NLI98_RS20885;Name=NLI98_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20885;old_locus_tag=NLI98_20880 NZ_CP100601.1 Protein Homology CDS 4298299 4299552 . - 0 ID=cds-WP_004145907.1;Parent=gene-NLI98_RS20885;Dbxref=Genbank:WP_004145907.1;Name=WP_004145907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225165.1;locus_tag=NLI98_RS20885;product=polysaccharide deacetylase family protein;protein_id=WP_004145907.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4299611 4300051 . - . ID=gene-NLI98_RS20890;Name=NLI98_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20890;old_locus_tag=NLI98_20885 NZ_CP100601.1 Protein Homology CDS 4299611 4300051 . - 0 ID=cds-WP_004177394.1;Parent=gene-NLI98_RS20890;Dbxref=Genbank:WP_004177394.1;Name=WP_004177394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225164.1;locus_tag=NLI98_RS20890;product=PTS sugar transporter subunit IIA;protein_id=WP_004177394.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4300174 4300944 . - . ID=gene-NLI98_RS20895;Name=NLI98_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20895;old_locus_tag=NLI98_20890 NZ_CP100601.1 Protein Homology CDS 4300174 4300944 . - 0 ID=cds-WP_002888827.1;Parent=gene-NLI98_RS20895;Dbxref=Genbank:WP_002888827.1;Name=WP_002888827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001747261.1;locus_tag=NLI98_RS20895;product=ABC transporter permease;protein_id=WP_002888827.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4300941 4301867 . - . ID=gene-NLI98_RS20900;Name=NLI98_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20900;old_locus_tag=NLI98_20895 NZ_CP100601.1 Protein Homology CDS 4300941 4301867 . - 0 ID=cds-WP_002888823.1;Parent=gene-NLI98_RS20900;Dbxref=Genbank:WP_002888823.1;Name=WP_002888823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225162.1;locus_tag=NLI98_RS20900;product=ABC transporter ATP-binding protein;protein_id=WP_002888823.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4302052 4302714 . + . ID=gene-NLI98_RS20905;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=NLI98_RS20905;old_locus_tag=NLI98_20900 NZ_CP100601.1 Protein Homology CDS 4302052 4302714 . + 0 ID=cds-WP_002888821.1;Parent=gene-NLI98_RS20905;Dbxref=Genbank:WP_002888821.1;Name=WP_002888821.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414668.1;locus_tag=NLI98_RS20905;product=carbonate dehydratase;protein_id=WP_002888821.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4302774 4303310 . - . ID=gene-NLI98_RS20910;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=NLI98_RS20910;old_locus_tag=NLI98_20905 NZ_CP100601.1 Protein Homology CDS 4302774 4303310 . - 0 ID=cds-WP_002888819.1;Parent=gene-NLI98_RS20910;Dbxref=Genbank:WP_002888819.1;Name=WP_002888819.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204384.1;locus_tag=NLI98_RS20910;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_002888819.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4303315 4303434 . - . ID=gene-NLI98_RS20915;Name=NLI98_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20915;old_locus_tag=NLI98_20910 NZ_CP100601.1 Protein Homology CDS 4303315 4303434 . - 0 ID=cds-WP_012542835.1;Parent=gene-NLI98_RS20915;Dbxref=Genbank:WP_012542835.1;Name=WP_012542835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225159.1;locus_tag=NLI98_RS20915;product=hypothetical protein;protein_id=WP_012542835.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4303515 4305905 . + . ID=gene-NLI98_RS20920;Name=NLI98_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20920;old_locus_tag=NLI98_20915 NZ_CP100601.1 Protein Homology CDS 4303515 4305905 . + 0 ID=cds-WP_002888816.1;Parent=gene-NLI98_RS20920;Dbxref=Genbank:WP_002888816.1;Name=WP_002888816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225158.1;locus_tag=NLI98_RS20920;product=glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase;protein_id=WP_002888816.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4305989 4307599 . - . ID=gene-NLI98_RS20925;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=NLI98_RS20925;old_locus_tag=NLI98_20920 NZ_CP100601.1 Protein Homology CDS 4305989 4307599 . - 0 ID=cds-WP_088498380.1;Parent=gene-NLI98_RS20925;Dbxref=Genbank:WP_088498380.1;Name=WP_088498380.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225157.1;locus_tag=NLI98_RS20925;product=multicopper oxidase CueO;protein_id=WP_088498380.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4307745 4308092 . + . ID=gene-NLI98_RS20930;Name=NLI98_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20930;old_locus_tag=NLI98_20925 NZ_CP100601.1 Protein Homology CDS 4307745 4308092 . + 0 ID=cds-WP_002888808.1;Parent=gene-NLI98_RS20930;Dbxref=Genbank:WP_002888808.1;Name=WP_002888808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414664.4;locus_tag=NLI98_RS20930;product=YacC family pilotin-like protein;protein_id=WP_002888808.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4308340 4308750 . + . ID=gene-NLI98_RS20935;Name=NLI98_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20935;old_locus_tag=NLI98_20930 NZ_CP100601.1 Protein Homology CDS 4308340 4308750 . + 0 ID=cds-WP_004145917.1;Parent=gene-NLI98_RS20935;Dbxref=Genbank:WP_004145917.1;Name=WP_004145917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225155.1;locus_tag=NLI98_RS20935;product=hypothetical protein;protein_id=WP_004145917.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4309188 4310606 . + . ID=gene-NLI98_RS20940;Name=NLI98_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20940;old_locus_tag=NLI98_20935 NZ_CP100601.1 Protein Homology CDS 4309188 4310606 . + 0 ID=cds-WP_225733963.1;Parent=gene-NLI98_RS20940;Dbxref=Genbank:WP_225733963.1;Name=WP_225733963.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194936.1;locus_tag=NLI98_RS20940;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_225733963.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4310756 4311616 . + . ID=gene-NLI98_RS20945;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=NLI98_RS20945;old_locus_tag=NLI98_20940 NZ_CP100601.1 Protein Homology CDS 4310756 4311616 . + 0 ID=cds-WP_002888741.1;Parent=gene-NLI98_RS20945;Dbxref=Genbank:WP_002888741.1;Name=WP_002888741.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225148.1;locus_tag=NLI98_RS20945;product=polyamine aminopropyltransferase;protein_id=WP_002888741.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4311641 4312435 . + . ID=gene-NLI98_RS20950;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=NLI98_RS20950;old_locus_tag=NLI98_20945 NZ_CP100601.1 Protein Homology CDS 4311641 4312435 . + 0 ID=cds-WP_002888739.1;Parent=gene-NLI98_RS20950;Dbxref=Genbank:WP_002888739.1;Name=WP_002888739.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225147.1;locus_tag=NLI98_RS20950;product=adenosylmethionine decarboxylase;protein_id=WP_002888739.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4312591 4312953 . - . ID=gene-NLI98_RS20955;Name=yacL;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=NLI98_RS20955;old_locus_tag=NLI98_20950 NZ_CP100601.1 Protein Homology CDS 4312591 4312953 . - 0 ID=cds-WP_002888737.1;Parent=gene-NLI98_RS20955;Dbxref=Genbank:WP_002888737.1;Name=WP_002888737.1;gbkey=CDS;gene=yacL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225146.1;locus_tag=NLI98_RS20955;product=protein YacL;protein_id=WP_002888737.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4313140 4315737 . - . ID=gene-NLI98_RS20960;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=NLI98_RS20960;old_locus_tag=NLI98_20955 NZ_CP100601.1 Protein Homology CDS 4313140 4315737 . - 0 ID=cds-WP_088498378.1;Parent=gene-NLI98_RS20960;Dbxref=Genbank:WP_088498378.1;Name=WP_088498378.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459163.1;locus_tag=NLI98_RS20960;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_088498378.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4316169 4317776 . + . ID=gene-NLI98_RS20965;Name=NLI98_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20965;old_locus_tag=NLI98_20960 NZ_CP100601.1 Protein Homology CDS 4316169 4317776 . + 0 ID=cds-WP_040224180.1;Parent=gene-NLI98_RS20965;Dbxref=Genbank:WP_040224180.1;Name=WP_040224180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225143.1;locus_tag=NLI98_RS20965;product=DUF3300 domain-containing protein;protein_id=WP_040224180.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4317788 4318594 . + . ID=gene-NLI98_RS20970;Name=NLI98_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20970;old_locus_tag=NLI98_20965 NZ_CP100601.1 Protein Homology CDS 4317788 4318594 . + 0 ID=cds-WP_002888733.1;Parent=gene-NLI98_RS20970;Dbxref=Genbank:WP_002888733.1;Name=WP_002888733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225142.1;locus_tag=NLI98_RS20970;product=DUF2950 family protein;protein_id=WP_002888733.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4318640 4318924 . - . ID=gene-NLI98_RS20975;Name=NLI98_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS20975;old_locus_tag=NLI98_20970 NZ_CP100601.1 Protein Homology CDS 4318640 4318924 . - 0 ID=cds-WP_002888732.1;Parent=gene-NLI98_RS20975;Dbxref=Genbank:WP_002888732.1;Name=WP_002888732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225141.1;locus_tag=NLI98_RS20975;product=hypothetical protein;protein_id=WP_002888732.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4319089 4320513 . - . ID=gene-NLI98_RS20980;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=NLI98_RS20980;old_locus_tag=NLI98_20975 NZ_CP100601.1 Protein Homology CDS 4319089 4320513 . - 0 ID=cds-WP_002888731.1;Parent=gene-NLI98_RS20980;Dbxref=Genbank:WP_002888731.1;Name=WP_002888731.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001738005.1;locus_tag=NLI98_RS20980;product=dihydrolipoyl dehydrogenase;protein_id=WP_002888731.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4320720 4322618 . - . ID=gene-NLI98_RS20985;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=NLI98_RS20985;old_locus_tag=NLI98_20980 NZ_CP100601.1 Protein Homology CDS 4320720 4322618 . - 0 ID=cds-WP_004147092.1;Parent=gene-NLI98_RS20985;Dbxref=Genbank:WP_004147092.1;Name=WP_004147092.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225139.1;locus_tag=NLI98_RS20985;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_004147092.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4322633 4325296 . - . ID=gene-NLI98_RS20990;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=NLI98_RS20990;old_locus_tag=NLI98_20985 NZ_CP100601.1 Protein Homology CDS 4322633 4325296 . - 0 ID=cds-WP_002888700.1;Parent=gene-NLI98_RS20990;Dbxref=Genbank:WP_002888700.1;Name=WP_002888700.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=NLI98_RS20990;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_002888700.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4325433 4326212 . - . ID=gene-NLI98_RS20995;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=NLI98_RS20995;old_locus_tag=NLI98_20990 NZ_CP100601.1 Protein Homology CDS 4325433 4326212 . - 0 ID=cds-WP_002888699.1;Parent=gene-NLI98_RS20995;Dbxref=Genbank:WP_002888699.1;Name=WP_002888699.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225137.1;locus_tag=NLI98_RS20995;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_002888699.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4326856 4328226 . + . ID=gene-NLI98_RS21000;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=NLI98_RS21000;old_locus_tag=NLI98_20995 NZ_CP100601.1 Protein Homology CDS 4326856 4328226 . + 0 ID=cds-WP_004147090.1;Parent=gene-NLI98_RS21000;Dbxref=Genbank:WP_004147090.1;Name=WP_004147090.1;Ontology_term=GO:0006865;gbkey=CDS;gene=aroP;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225135.1;locus_tag=NLI98_RS21000;product=aromatic amino acid transporter AroP;protein_id=WP_004147090.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4328411 4329817 . + . ID=gene-NLI98_RS21005;Name=NLI98_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21005;old_locus_tag=NLI98_21000 NZ_CP100601.1 Protein Homology CDS 4328411 4329817 . + 0 ID=cds-WP_004145929.1;Parent=gene-NLI98_RS21005;Dbxref=Genbank:WP_004145929.1;Name=WP_004145929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225134.1;locus_tag=NLI98_RS21005;product=MFS transporter;protein_id=WP_004145929.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4329817 4330767 . + . ID=gene-NLI98_RS21010;Name=NLI98_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21010;old_locus_tag=NLI98_21005 NZ_CP100601.1 Protein Homology CDS 4329817 4330767 . + 0 ID=cds-WP_048334687.1;Parent=gene-NLI98_RS21010;Dbxref=Genbank:WP_048334687.1;Name=WP_048334687.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225133.1;locus_tag=NLI98_RS21010;product=family 43 glycosylhydrolase;protein_id=WP_048334687.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4331003 4331857 . - . ID=gene-NLI98_RS21015;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=NLI98_RS21015;old_locus_tag=NLI98_21010 NZ_CP100601.1 Protein Homology CDS 4331003 4331857 . - 0 ID=cds-WP_004177406.1;Parent=gene-NLI98_RS21015;Dbxref=Genbank:WP_004177406.1;Name=WP_004177406.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225132.1;locus_tag=NLI98_RS21015;product=beta-lactamase regulator AmpE;protein_id=WP_004177406.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4331854 4332417 . - . ID=gene-NLI98_RS21020;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=NLI98_RS21020;old_locus_tag=NLI98_21015 NZ_CP100601.1 Protein Homology CDS 4331854 4332417 . - 0 ID=cds-WP_002888692.1;Parent=gene-NLI98_RS21020;Dbxref=Genbank:WP_002888692.1;Name=WP_002888692.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225131.1;locus_tag=NLI98_RS21020;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_002888692.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4332551 4333444 . + . ID=gene-NLI98_RS21025;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=NLI98_RS21025;old_locus_tag=NLI98_21020 NZ_CP100601.1 Protein Homology CDS 4332551 4333444 . + 0 ID=cds-WP_002888684.1;Parent=gene-NLI98_RS21025;Dbxref=Genbank:WP_002888684.1;Name=WP_002888684.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225130.1;locus_tag=NLI98_RS21025;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_002888684.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4333626 4334057 . + . ID=gene-NLI98_RS21030;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=NLI98_RS21030;old_locus_tag=NLI98_21025 NZ_CP100601.1 Protein Homology CDS 4333626 4334057 . + 0 ID=cds-WP_002888683.1;Parent=gene-NLI98_RS21030;Dbxref=Genbank:WP_002888683.1;Name=WP_002888683.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225129.1;locus_tag=NLI98_RS21030;product=prepilin peptidase-dependent pilin;protein_id=WP_002888683.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4334068 4335453 . + . ID=gene-NLI98_RS21035;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=NLI98_RS21035;old_locus_tag=NLI98_21030 NZ_CP100601.1 Protein Homology CDS 4334068 4335453 . + 0 ID=cds-WP_004145935.1;Parent=gene-NLI98_RS21035;Dbxref=Genbank:WP_004145935.1;Name=WP_004145935.1;gbkey=CDS;gene=gspE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225128.1;locus_tag=NLI98_RS21035;product=type II secretion system protein GspE;protein_id=WP_004145935.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4335443 4336648 . + . ID=gene-NLI98_RS21040;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=NLI98_RS21040;old_locus_tag=NLI98_21035 NZ_CP100601.1 Protein Homology CDS 4335443 4336648 . + 0 ID=cds-WP_088498377.1;Parent=gene-NLI98_RS21040;Dbxref=Genbank:WP_088498377.1;Name=WP_088498377.1;Ontology_term=GO:0004827;gbkey=CDS;gene=hofC;go_function=proline-tRNA ligase activity|0004827||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225127.1;locus_tag=NLI98_RS21040;product=protein transport protein HofC;protein_id=WP_088498377.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4336685 4337728 . - . ID=gene-NLI98_RS21045;Name=NLI98_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21045;old_locus_tag=NLI98_21040 NZ_CP100601.1 Protein Homology CDS 4336685 4337728 . - 0 ID=cds-WP_004145938.1;Parent=gene-NLI98_RS21045;Dbxref=Genbank:WP_004145938.1;Name=WP_004145938.1;Ontology_term=GO:0009117,GO:0003920;gbkey=CDS;go_function=GMP reductase activity|0003920||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008461816.1;locus_tag=NLI98_RS21045;product=GMP reductase;protein_id=WP_004145938.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4338072 4338692 . + . ID=gene-NLI98_RS21050;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=NLI98_RS21050;old_locus_tag=NLI98_21045 NZ_CP100601.1 Protein Homology CDS 4338072 4338692 . + 0 ID=cds-WP_002888649.1;Parent=gene-NLI98_RS21050;Dbxref=Genbank:WP_002888649.1;Name=WP_002888649.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204351.1;locus_tag=NLI98_RS21050;product=dephospho-CoA kinase;protein_id=WP_002888649.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4338692 4339435 . + . ID=gene-NLI98_RS21055;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=NLI98_RS21055;old_locus_tag=NLI98_21050 NZ_CP100601.1 Protein Homology CDS 4338692 4339435 . + 0 ID=cds-WP_004178596.1;Parent=gene-NLI98_RS21055;Dbxref=Genbank:WP_004178596.1;Name=WP_004178596.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225123.1;locus_tag=NLI98_RS21055;product=cell division protein ZapD;protein_id=WP_004178596.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4339445 4339639 . + . ID=gene-NLI98_RS21060;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=NLI98_RS21060;old_locus_tag=NLI98_21055 NZ_CP100601.1 Protein Homology CDS 4339445 4339639 . + 0 ID=cds-WP_002888644.1;Parent=gene-NLI98_RS21060;Dbxref=Genbank:WP_002888644.1;Name=WP_002888644.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225122.1;locus_tag=NLI98_RS21060;product=DNA gyrase inhibitor YacG;protein_id=WP_002888644.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4339652 4340083 . - . ID=gene-NLI98_RS21065;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=NLI98_RS21065;old_locus_tag=NLI98_21060 NZ_CP100601.1 Protein Homology CDS 4339652 4340083 . - 0 ID=cds-WP_064188489.1;Parent=gene-NLI98_RS21065;Dbxref=Genbank:WP_064188489.1;Name=WP_064188489.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079608.1;locus_tag=NLI98_RS21065;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_064188489.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4340142 4342847 . - . ID=gene-NLI98_RS21070;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=NLI98_RS21070;old_locus_tag=NLI98_21065 NZ_CP100601.1 Protein Homology CDS 4340142 4342847 . - 0 ID=cds-WP_002888638.1;Parent=gene-NLI98_RS21070;Dbxref=Genbank:WP_002888638.1;Name=WP_002888638.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015704405.1;locus_tag=NLI98_RS21070;product=preprotein translocase subunit SecA;protein_id=WP_002888638.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4342910 4343407 . - . ID=gene-NLI98_RS21075;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=NLI98_RS21075;old_locus_tag=NLI98_21070 NZ_CP100601.1 Protein Homology CDS 4342910 4343407 . - 0 ID=cds-WP_002888635.1;Parent=gene-NLI98_RS21075;Dbxref=Genbank:WP_002888635.1;Name=WP_002888635.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000014335.1;locus_tag=NLI98_RS21075;product=secA translation cis-regulator SecM;protein_id=WP_002888635.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4343730 4344647 . - . ID=gene-NLI98_RS21080;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=NLI98_RS21080;old_locus_tag=NLI98_21075 NZ_CP100601.1 Protein Homology CDS 4343730 4344647 . - 0 ID=cds-WP_002888632.1;Parent=gene-NLI98_RS21080;Dbxref=Genbank:WP_002888632.1;Name=WP_002888632.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308127.1;locus_tag=NLI98_RS21080;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_002888632.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4344748 4345899 . - . ID=gene-NLI98_RS21085;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=NLI98_RS21085;old_locus_tag=NLI98_21080 NZ_CP100601.1 Protein Homology CDS 4344748 4345899 . - 0 ID=cds-WP_002888628.1;Parent=gene-NLI98_RS21085;Dbxref=Genbank:WP_002888628.1;Name=WP_002888628.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=NLI98_RS21085;product=cell division protein FtsZ;protein_id=WP_002888628.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4345962 4347224 . - . ID=gene-NLI98_RS21090;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=NLI98_RS21090;old_locus_tag=NLI98_21085 NZ_CP100601.1 Protein Homology CDS 4345962 4347224 . - 0 ID=cds-WP_002888625.1;Parent=gene-NLI98_RS21090;Dbxref=Genbank:WP_002888625.1;Name=WP_002888625.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225115.1;locus_tag=NLI98_RS21090;product=cell division protein FtsA;protein_id=WP_002888625.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4347221 4348051 . - . ID=gene-NLI98_RS21095;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=NLI98_RS21095;old_locus_tag=NLI98_21090 NZ_CP100601.1 Protein Homology CDS 4347221 4348051 . - 0 ID=cds-WP_002888624.1;Parent=gene-NLI98_RS21095;Dbxref=Genbank:WP_002888624.1;Name=WP_002888624.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308124.1;locus_tag=NLI98_RS21095;product=cell division protein FtsQ;protein_id=WP_002888624.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4348053 4348973 . - . ID=gene-NLI98_RS21100;Name=NLI98_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21100;old_locus_tag=NLI98_21095 NZ_CP100601.1 Protein Homology CDS 4348053 4348973 . - 0 ID=cds-WP_002888623.1;Parent=gene-NLI98_RS21100;Dbxref=Genbank:WP_002888623.1;Name=WP_002888623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225113.1;locus_tag=NLI98_RS21100;product=D-alanine--D-alanine ligase;protein_id=WP_002888623.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4348966 4350441 . - . ID=gene-NLI98_RS21105;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=NLI98_RS21105;old_locus_tag=NLI98_21100 NZ_CP100601.1 Protein Homology CDS 4348966 4350441 . - 0 ID=cds-WP_088498376.1;Parent=gene-NLI98_RS21105;Dbxref=Genbank:WP_088498376.1;Name=WP_088498376.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459134.1;locus_tag=NLI98_RS21105;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_088498376.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4350489 4351559 . - . ID=gene-NLI98_RS21110;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=NLI98_RS21110;old_locus_tag=NLI98_21105 NZ_CP100601.1 Protein Homology CDS 4350489 4351559 . - 0 ID=cds-WP_088498375.1;Parent=gene-NLI98_RS21110;Dbxref=Genbank:WP_088498375.1;Name=WP_088498375.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225110.1;locus_tag=NLI98_RS21110;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_088498375.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4351556 4352830 . - . ID=gene-NLI98_RS21115;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=NLI98_RS21115;old_locus_tag=NLI98_21110 NZ_CP100601.1 Protein Homology CDS 4351556 4352830 . - 0 ID=cds-WP_002888565.1;Parent=gene-NLI98_RS21115;Dbxref=Genbank:WP_002888565.1;Name=WP_002888565.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225109.1;locus_tag=NLI98_RS21115;product=cell division protein FtsW;protein_id=WP_002888565.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4352830 4354146 . - . ID=gene-NLI98_RS21120;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=NLI98_RS21120;old_locus_tag=NLI98_21115 NZ_CP100601.1 Protein Homology CDS 4352830 4354146 . - 0 ID=cds-WP_004151364.1;Parent=gene-NLI98_RS21120;Dbxref=Genbank:WP_004151364.1;Name=WP_004151364.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124612.1;locus_tag=NLI98_RS21120;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_004151364.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4354149 4355231 . - . ID=gene-NLI98_RS21125;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=NLI98_RS21125;old_locus_tag=NLI98_21120 NZ_CP100601.1 Protein Homology CDS 4354149 4355231 . - 0 ID=cds-WP_002888562.1;Parent=gene-NLI98_RS21125;Dbxref=Genbank:WP_002888562.1;Name=WP_002888562.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=NLI98_RS21125;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_002888562.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4355225 4356583 . - . ID=gene-NLI98_RS21130;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=NLI98_RS21130;old_locus_tag=NLI98_21125 NZ_CP100601.1 Protein Homology CDS 4355225 4356583 . - 0 ID=cds-WP_004177411.1;Parent=gene-NLI98_RS21130;Dbxref=Genbank:WP_004177411.1;Name=WP_004177411.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225106.1;locus_tag=NLI98_RS21130;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_004177411.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4356580 4358067 . - . ID=gene-NLI98_RS21135;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=NLI98_RS21135;old_locus_tag=NLI98_21130 NZ_CP100601.1 Protein Homology CDS 4356580 4358067 . - 0 ID=cds-WP_088498374.1;Parent=gene-NLI98_RS21135;Dbxref=Genbank:WP_088498374.1;Name=WP_088498374.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225105.1;locus_tag=NLI98_RS21135;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_088498374.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4358054 4359820 . - . ID=gene-NLI98_RS21140;Name=NLI98_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21140;old_locus_tag=NLI98_21135 NZ_CP100601.1 Protein Homology CDS 4358054 4359820 . - 0 ID=cds-WP_002888559.1;Parent=gene-NLI98_RS21140;Dbxref=Genbank:WP_002888559.1;Name=WP_002888559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000642204.1;locus_tag=NLI98_RS21140;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_002888559.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4359836 4360201 . - . ID=gene-NLI98_RS21145;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=NLI98_RS21145;old_locus_tag=NLI98_21140 NZ_CP100601.1 Protein Homology CDS 4359836 4360201 . - 0 ID=cds-WP_002888550.1;Parent=gene-NLI98_RS21145;Dbxref=Genbank:WP_002888550.1;Name=WP_002888550.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000625658.1;locus_tag=NLI98_RS21145;product=cell division protein FtsL;protein_id=WP_002888550.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4360198 4361139 . - . ID=gene-NLI98_RS21150;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=NLI98_RS21150;old_locus_tag=NLI98_21145 NZ_CP100601.1 Protein Homology CDS 4360198 4361139 . - 0 ID=cds-WP_002888547.1;Parent=gene-NLI98_RS21150;Dbxref=Genbank:WP_002888547.1;Name=WP_002888547.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124563.1;locus_tag=NLI98_RS21150;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_002888547.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4361142 4361600 . - . ID=gene-NLI98_RS21155;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=NLI98_RS21155;old_locus_tag=NLI98_21150 NZ_CP100601.1 Protein Homology CDS 4361142 4361600 . - 0 ID=cds-WP_002888541.1;Parent=gene-NLI98_RS21155;Dbxref=Genbank:WP_002888541.1;Name=WP_002888541.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020325403.1;locus_tag=NLI98_RS21155;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_002888541.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4362241 4363245 . - . ID=gene-NLI98_RS21160;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=NLI98_RS21160;old_locus_tag=NLI98_21155 NZ_CP100601.1 Protein Homology CDS 4362241 4363245 . - 0 ID=cds-WP_004145952.1;Parent=gene-NLI98_RS21160;Dbxref=Genbank:WP_004145952.1;Name=WP_004145952.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225100.1;locus_tag=NLI98_RS21160;product=catabolite repressor/activator;protein_id=WP_004145952.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4363426 4363917 . - . ID=gene-NLI98_RS21165;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=NLI98_RS21165;old_locus_tag=NLI98_21160 NZ_CP100601.1 Protein Homology CDS 4363426 4363917 . - 0 ID=cds-WP_002888536.1;Parent=gene-NLI98_RS21165;Dbxref=Genbank:WP_002888536.1;Name=WP_002888536.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001563086.1;locus_tag=NLI98_RS21165;product=acetolactate synthase small subunit;protein_id=WP_002888536.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4363920 4365644 . - . ID=gene-NLI98_RS21170;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=NLI98_RS21170;old_locus_tag=NLI98_21165 NZ_CP100601.1 Protein Homology CDS 4363920 4365644 . - 0 ID=cds-WP_002888534.1;Parent=gene-NLI98_RS21170;Dbxref=Genbank:WP_002888534.1;Name=WP_002888534.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvI;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079613.1;locus_tag=NLI98_RS21170;product=acetolactate synthase 3 large subunit;protein_id=WP_002888534.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4366039 4367007 . - . ID=gene-NLI98_RS21175;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=NLI98_RS21175;old_locus_tag=NLI98_21170 NZ_CP100601.1 Protein Homology CDS 4366039 4367007 . - 0 ID=cds-WP_004192013.1;Parent=gene-NLI98_RS21175;Dbxref=Genbank:WP_004192013.1;Name=WP_004192013.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225097.1;locus_tag=NLI98_RS21175;product=transcriptional regulator LeuO;protein_id=WP_004192013.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4367621 4367707 . + . ID=gene-NLI98_RS21180;Name=leuL;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=NLI98_RS21180;old_locus_tag=NLI98_21175 NZ_CP100601.1 Protein Homology CDS 4367621 4367707 . + 0 ID=cds-WP_004222662.1;Parent=gene-NLI98_RS21180;Dbxref=Genbank:WP_004222662.1;Name=WP_004222662.1;Ontology_term=GO:0009098;gbkey=CDS;gene=leuL;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017901192.1;locus_tag=NLI98_RS21180;product=leu operon leader peptide;protein_id=WP_004222662.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4367803 4369374 . + . ID=gene-NLI98_RS21185;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=NLI98_RS21185;old_locus_tag=NLI98_21180 NZ_CP100601.1 Protein Homology CDS 4367803 4369374 . + 0 ID=cds-WP_004178594.1;Parent=gene-NLI98_RS21185;Dbxref=Genbank:WP_004178594.1;Name=WP_004178594.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831521.1;locus_tag=NLI98_RS21185;product=2-isopropylmalate synthase;protein_id=WP_004178594.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4369374 4370465 . + . ID=gene-NLI98_RS21190;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=NLI98_RS21190;old_locus_tag=NLI98_21185 NZ_CP100601.1 Protein Homology CDS 4369374 4370465 . + 0 ID=cds-WP_002888487.1;Parent=gene-NLI98_RS21190;Dbxref=Genbank:WP_002888487.1;Name=WP_002888487.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124544.1;locus_tag=NLI98_RS21190;product=3-isopropylmalate dehydrogenase;protein_id=WP_002888487.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4370468 4371868 . + . ID=gene-NLI98_RS21195;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=NLI98_RS21195;old_locus_tag=NLI98_21190 NZ_CP100601.1 Protein Homology CDS 4370468 4371868 . + 0 ID=cds-WP_004177417.1;Parent=gene-NLI98_RS21195;Dbxref=Genbank:WP_004177417.1;Name=WP_004177417.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225093.1;locus_tag=NLI98_RS21195;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_004177417.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4371879 4372484 . + . ID=gene-NLI98_RS21200;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=NLI98_RS21200;old_locus_tag=NLI98_21195 NZ_CP100601.1 Protein Homology CDS 4371879 4372484 . + 0 ID=cds-WP_002888481.1;Parent=gene-NLI98_RS21200;Dbxref=Genbank:WP_002888481.1;Name=WP_002888481.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225092.1;locus_tag=NLI98_RS21200;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_002888481.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4372880 4374913 . + . ID=gene-NLI98_RS21205;Name=NLI98_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21205;old_locus_tag=NLI98_21200 NZ_CP100601.1 Protein Homology CDS 4372880 4374913 . + 0 ID=cds-WP_004178592.1;Parent=gene-NLI98_RS21205;Dbxref=Genbank:WP_004178592.1;Name=WP_004178592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225091.1;locus_tag=NLI98_RS21205;product=FAD-dependent oxidoreductase;protein_id=WP_004178592.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4374925 4375788 . + . ID=gene-NLI98_RS21210;Name=NLI98_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21210;old_locus_tag=NLI98_21205 NZ_CP100601.1 Protein Homology CDS 4374925 4375788 . + 0 ID=cds-WP_002888460.1;Parent=gene-NLI98_RS21210;Dbxref=Genbank:WP_002888460.1;Name=WP_002888460.1;Ontology_term=GO:0019632,GO:0004764,GO:0050661;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA,NADP binding|0050661||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225090.1;locus_tag=NLI98_RS21210;product=shikimate dehydrogenase;protein_id=WP_002888460.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4375799 4377013 . + . ID=gene-NLI98_RS21215;Name=NLI98_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21215;old_locus_tag=NLI98_21210 NZ_CP100601.1 Protein Homology CDS 4375799 4377013 . + 0 ID=cds-WP_002888458.1;Parent=gene-NLI98_RS21215;Dbxref=Genbank:WP_002888458.1;Name=WP_002888458.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225089.1;locus_tag=NLI98_RS21215;product=MFS transporter;protein_id=WP_002888458.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4377044 4377799 . + . ID=gene-NLI98_RS21220;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=NLI98_RS21220;old_locus_tag=NLI98_21215 NZ_CP100601.1 Protein Homology CDS 4377044 4377799 . + 0 ID=cds-WP_004177420.1;Parent=gene-NLI98_RS21220;Dbxref=Genbank:WP_004177420.1;Name=WP_004177420.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225088.1;locus_tag=NLI98_RS21220;product=type I 3-dehydroquinate dehydratase;protein_id=WP_004177420.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4377837 4378733 . - . ID=gene-NLI98_RS21225;Name=NLI98_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21225;old_locus_tag=NLI98_21220 NZ_CP100601.1 Protein Homology CDS 4377837 4378733 . - 0 ID=cds-WP_002888455.1;Parent=gene-NLI98_RS21225;Dbxref=Genbank:WP_002888455.1;Name=WP_002888455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225087.1;locus_tag=NLI98_RS21225;product=LysR family transcriptional regulator;protein_id=WP_002888455.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4378965 4380275 . + . ID=gene-NLI98_RS21230;Name=NLI98_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21230;old_locus_tag=NLI98_21225 NZ_CP100601.1 Protein Homology CDS 4378965 4380275 . + 0 ID=cds-WP_004147047.1;Parent=gene-NLI98_RS21230;Dbxref=Genbank:WP_004147047.1;Name=WP_004147047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225086.1;locus_tag=NLI98_RS21230;product=MFS transporter;protein_id=WP_004147047.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4380309 4381493 . - . ID=gene-NLI98_RS21235;Name=NLI98_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21235;old_locus_tag=NLI98_21230 NZ_CP100601.1 Protein Homology CDS 4380309 4381493 . - 0 ID=cds-WP_088498373.1;Parent=gene-NLI98_RS21235;Dbxref=Genbank:WP_088498373.1;Name=WP_088498373.1;Ontology_term=GO:0008643,GO:0005351;gbkey=CDS;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225085.1;locus_tag=NLI98_RS21235;product=sugar efflux transporter;protein_id=WP_088498373.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4381761 4381913 . - . ID=gene-NLI98_RS21240;Name=NLI98_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21240;old_locus_tag=NLI98_21235 NZ_CP100601.1 Protein Homology CDS 4381761 4381913 . - 0 ID=cds-WP_002888448.1;Parent=gene-NLI98_RS21240;Dbxref=Genbank:WP_002888448.1;Name=WP_002888448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225083.1;locus_tag=NLI98_RS21240;product=glucose uptake inhibitor SgrT;protein_id=WP_002888448.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4382001 4383656 . + . ID=gene-NLI98_RS21245;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=NLI98_RS21245;old_locus_tag=NLI98_21240 NZ_CP100601.1 Protein Homology CDS 4382001 4383656 . + 0 ID=cds-WP_088498372.1;Parent=gene-NLI98_RS21245;Dbxref=Genbank:WP_088498372.1;Name=WP_088498372.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225082.1;locus_tag=NLI98_RS21245;product=HTH-type transcriptional regulator SgrR;protein_id=WP_088498372.1;transl_table=11 NZ_CP100601.1 cmsearch riboswitch 4383694 4383913 . + . ID=id-NZ_CP100601.1:4383694..4383913;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100601.1 RefSeq gene 4383946 4384929 . + . ID=gene-NLI98_RS21250;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=NLI98_RS21250;old_locus_tag=NLI98_21245 NZ_CP100601.1 Protein Homology CDS 4383946 4384929 . + 0 ID=cds-WP_004178584.1;Parent=gene-NLI98_RS21250;Dbxref=Genbank:WP_004178584.1;Name=WP_004178584.1;Ontology_term=GO:0015888,GO:0030974,GO:0030975,GO:0030976,GO:0048502,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,thiamine pyrophosphate binding|0030976||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA,thiamine pyrophosphate transmembrane transport|0030974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225081.1;locus_tag=NLI98_RS21250;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_004178584.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4384905 4386515 . + . ID=gene-NLI98_RS21255;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=NLI98_RS21255;old_locus_tag=NLI98_21250 NZ_CP100601.1 Protein Homology CDS 4384905 4386515 . + 0 ID=cds-WP_002888430.1;Parent=gene-NLI98_RS21255;Dbxref=Genbank:WP_002888430.1;Name=WP_002888430.1;gbkey=CDS;gene=thiP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225080.1;locus_tag=NLI98_RS21255;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_002888430.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4386499 4387200 . + . ID=gene-NLI98_RS21260;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=NLI98_RS21260;old_locus_tag=NLI98_21255 NZ_CP100601.1 Protein Homology CDS 4386499 4387200 . + 0 ID=cds-WP_004145970.1;Parent=gene-NLI98_RS21260;Dbxref=Genbank:WP_004145970.1;Name=WP_004145970.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225079.1;locus_tag=NLI98_RS21260;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_004145970.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4387187 4387954 . - . ID=gene-NLI98_RS21265;Name=NLI98_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21265;old_locus_tag=NLI98_21260 NZ_CP100601.1 Protein Homology CDS 4387187 4387954 . - 0 ID=cds-WP_004182913.1;Parent=gene-NLI98_RS21265;Dbxref=Genbank:WP_004182913.1;Name=WP_004182913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225078.1;locus_tag=NLI98_RS21265;product=DedA family protein;protein_id=WP_004182913.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 4388083 4388927 . - . ID=gene-NLI98_RS21270;Name=araC;gbkey=Gene;gene=araC;gene_biotype=pseudogene;locus_tag=NLI98_RS21270;old_locus_tag=NLI98_21265;pseudo=true NZ_CP100601.1 Protein Homology CDS 4388083 4388927 . - 0 ID=cds-NLI98_RS21270;Parent=gene-NLI98_RS21270;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225077.1;locus_tag=NLI98_RS21270;product=arabinose operon transcriptional regulator AraC;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 4389265 4390974 . + . ID=gene-NLI98_RS21275;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=NLI98_RS21275;old_locus_tag=NLI98_21270 NZ_CP100601.1 Protein Homology CDS 4389265 4390974 . + 0 ID=cds-WP_088498371.1;Parent=gene-NLI98_RS21275;Dbxref=Genbank:WP_088498371.1;Name=WP_088498371.1;Ontology_term=GO:0019568,GO:0008741;gbkey=CDS;gene=araB;go_function=ribulokinase activity|0008741||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225075.1;locus_tag=NLI98_RS21275;product=ribulokinase;protein_id=WP_088498371.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4390985 4392487 . + . ID=gene-NLI98_RS21280;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=NLI98_RS21280;old_locus_tag=NLI98_21275 NZ_CP100601.1 Protein Homology CDS 4390985 4392487 . + 0 ID=cds-WP_004177424.1;Parent=gene-NLI98_RS21280;Dbxref=Genbank:WP_004177424.1;Name=WP_004177424.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225074.1;locus_tag=NLI98_RS21280;product=L-arabinose isomerase;protein_id=WP_004177424.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4392625 4393320 . + . ID=gene-NLI98_RS21285;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=NLI98_RS21285;old_locus_tag=NLI98_21280 NZ_CP100601.1 Protein Homology CDS 4392625 4393320 . + 0 ID=cds-WP_002888353.1;Parent=gene-NLI98_RS21285;Dbxref=Genbank:WP_002888353.1;Name=WP_002888353.1;Ontology_term=GO:0019568,GO:0008742;gbkey=CDS;gene=araD;go_function=L-ribulose-phosphate 4-epimerase activity|0008742||IEA;go_process=arabinose catabolic process|0019568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225073.1;locus_tag=NLI98_RS21285;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_002888353.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4393496 4395853 . + . ID=gene-NLI98_RS21290;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;locus_tag=NLI98_RS21290;old_locus_tag=NLI98_21285 NZ_CP100601.1 Protein Homology CDS 4393496 4395853 . + 0 ID=cds-WP_088498370.1;Parent=gene-NLI98_RS21290;Dbxref=Genbank:WP_088498370.1;Name=WP_088498370.1;Ontology_term=GO:0003677,GO:0003887;gbkey=CDS;gene=polB;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225072.1;locus_tag=NLI98_RS21290;product=DNA polymerase II;protein_id=WP_088498370.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4396041 4398947 . + . ID=gene-NLI98_RS21295;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=NLI98_RS21295;old_locus_tag=NLI98_21290 NZ_CP100601.1 Protein Homology CDS 4396041 4398947 . + 0 ID=cds-WP_004178574.1;Parent=gene-NLI98_RS21295;Dbxref=Genbank:WP_004178574.1;Name=WP_004178574.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001117023.1;locus_tag=NLI98_RS21295;product=RNA polymerase-associated protein RapA;protein_id=WP_004178574.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4398960 4399619 . + . ID=gene-NLI98_RS21300;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=NLI98_RS21300;old_locus_tag=NLI98_21295 NZ_CP100601.1 Protein Homology CDS 4398960 4399619 . + 0 ID=cds-WP_004145980.1;Parent=gene-NLI98_RS21300;Dbxref=Genbank:WP_004145980.1;Name=WP_004145980.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225070.1;locus_tag=NLI98_RS21300;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_004145980.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4399694 4400233 . - . ID=gene-NLI98_RS21305;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=NLI98_RS21305;old_locus_tag=NLI98_21300 NZ_CP100601.1 Protein Homology CDS 4399694 4400233 . - 0 ID=cds-WP_002888347.1;Parent=gene-NLI98_RS21305;Dbxref=Genbank:WP_002888347.1;Name=WP_002888347.1;Ontology_term=GO:0051191,GO:0050519;gbkey=CDS;gene=citX;go_function=holo-citrate lyase synthase activity|0050519||IEA;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225069.1;locus_tag=NLI98_RS21305;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=WP_002888347.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4400413 4401777 . - . ID=gene-NLI98_RS21310;Name=NLI98_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21310;old_locus_tag=NLI98_21305 NZ_CP100601.1 Protein Homology CDS 4400413 4401777 . - 0 ID=cds-WP_088498369.1;Parent=gene-NLI98_RS21310;Dbxref=Genbank:WP_088498369.1;Name=WP_088498369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225067.1;locus_tag=NLI98_RS21310;product=2-hydroxycarboxylate transporter family protein;protein_id=WP_088498369.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4402102 4403727 . + . ID=gene-NLI98_RS21315;Name=NLI98_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21315;old_locus_tag=NLI98_21310 NZ_CP100601.1 Protein Homology CDS 4402102 4403727 . + 0 ID=cds-WP_002888340.1;Parent=gene-NLI98_RS21315;Dbxref=Genbank:WP_002888340.1;Name=WP_002888340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225066.1;locus_tag=NLI98_RS21315;product=sensor histidine kinase;protein_id=WP_002888340.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4403717 4404415 . + . ID=gene-NLI98_RS21320;Name=NLI98_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21320;old_locus_tag=NLI98_21315 NZ_CP100601.1 Protein Homology CDS 4403717 4404415 . + 0 ID=cds-WP_088498368.1;Parent=gene-NLI98_RS21320;Dbxref=Genbank:WP_088498368.1;Name=WP_088498368.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225065.1;locus_tag=NLI98_RS21320;product=response regulator;protein_id=WP_088498368.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4404448 4405275 . - . ID=gene-NLI98_RS21325;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=NLI98_RS21325;old_locus_tag=NLI98_21320 NZ_CP100601.1 Protein Homology CDS 4404448 4405275 . - 0 ID=cds-WP_002888332.1;Parent=gene-NLI98_RS21325;Dbxref=Genbank:WP_002888332.1;Name=WP_002888332.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225064.1;locus_tag=NLI98_RS21325;product=co-chaperone DjlA;protein_id=WP_002888332.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4405519 4407867 . + . ID=gene-NLI98_RS21330;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=NLI98_RS21330;old_locus_tag=NLI98_21325 NZ_CP100601.1 Protein Homology CDS 4405519 4407867 . + 0 ID=cds-WP_004147026.1;Parent=gene-NLI98_RS21330;Dbxref=Genbank:WP_004147026.1;Name=WP_004147026.1;Ontology_term=GO:0010033,GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=response to organic substance|0010033||IEA,lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414596.1;locus_tag=NLI98_RS21330;product=LPS assembly protein LptD;protein_id=WP_004147026.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4407922 4409208 . + . ID=gene-NLI98_RS21335;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=NLI98_RS21335;old_locus_tag=NLI98_21330 NZ_CP100601.1 Protein Homology CDS 4407922 4409208 . + 0 ID=cds-WP_002888329.1;Parent=gene-NLI98_RS21335;Dbxref=Genbank:WP_002888329.1;Name=WP_002888329.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0060274,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA,maintenance of stationary phase|0060274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225062.1;locus_tag=NLI98_RS21335;product=peptidylprolyl isomerase SurA;protein_id=WP_002888329.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4409214 4410203 . + . ID=gene-NLI98_RS21340;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=NLI98_RS21340;old_locus_tag=NLI98_21335 NZ_CP100601.1 Protein Homology CDS 4409214 4410203 . + 0 ID=cds-WP_002888327.1;Parent=gene-NLI98_RS21340;Dbxref=Genbank:WP_002888327.1;Name=WP_002888327.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225061.1;locus_tag=NLI98_RS21340;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_002888327.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4410200 4411021 . + . ID=gene-NLI98_RS21345;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=NLI98_RS21345;old_locus_tag=NLI98_21340 NZ_CP100601.1 Protein Homology CDS 4410200 4411021 . + 0 ID=cds-WP_002888324.1;Parent=gene-NLI98_RS21345;Dbxref=Genbank:WP_002888324.1;Name=WP_002888324.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225060.1;locus_tag=NLI98_RS21345;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_002888324.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4411024 4411401 . + . ID=gene-NLI98_RS21350;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=NLI98_RS21350;old_locus_tag=NLI98_21345 NZ_CP100601.1 Protein Homology CDS 4411024 4411401 . + 0 ID=cds-WP_002888323.1;Parent=gene-NLI98_RS21350;Dbxref=Genbank:WP_002888323.1;Name=WP_002888323.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225059.1;locus_tag=NLI98_RS21350;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_002888323.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4411406 4412254 . + . ID=gene-NLI98_RS21355;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=NLI98_RS21355;old_locus_tag=NLI98_21350 NZ_CP100601.1 Protein Homology CDS 4411406 4412254 . + 0 ID=cds-WP_002888321.1;Parent=gene-NLI98_RS21355;Dbxref=Genbank:WP_002888321.1;Name=WP_002888321.1;Ontology_term=GO:0006139,GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225058.1;locus_tag=NLI98_RS21355;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_002888321.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4412678 4413157 . - . ID=gene-NLI98_RS21360;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=NLI98_RS21360;old_locus_tag=NLI98_21355 NZ_CP100601.1 Protein Homology CDS 4412678 4413157 . - 0 ID=cds-WP_002888320.1;Parent=gene-NLI98_RS21360;Dbxref=Genbank:WP_002888320.1;Name=WP_002888320.1;Ontology_term=GO:0046654;gbkey=CDS;gene=folA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456510.1;locus_tag=NLI98_RS21360;product=type 3 dihydrofolate reductase;protein_id=WP_002888320.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4413331 4415196 . - . ID=gene-NLI98_RS21365;Name=kefC;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=NLI98_RS21365;old_locus_tag=NLI98_21360 NZ_CP100601.1 Protein Homology CDS 4413331 4415196 . - 0 ID=cds-WP_009309220.1;Parent=gene-NLI98_RS21365;Dbxref=Genbank:WP_009309220.1;Name=WP_009309220.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefC;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225056.1;locus_tag=NLI98_RS21365;product=glutathione-regulated potassium-efflux system protein KefC;protein_id=WP_009309220.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4415189 4415722 . - . ID=gene-NLI98_RS21370;Name=kefF;gbkey=Gene;gene=kefF;gene_biotype=protein_coding;locus_tag=NLI98_RS21370;old_locus_tag=NLI98_21365 NZ_CP100601.1 Protein Homology CDS 4415189 4415722 . - 0 ID=cds-WP_008807478.1;Parent=gene-NLI98_RS21370;Dbxref=Genbank:WP_008807478.1;Name=WP_008807478.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefF;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225055.1;locus_tag=NLI98_RS21370;product=glutathione-regulated potassium-efflux system oxidoreductase KefF;protein_id=WP_008807478.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4415854 4416087 . - . ID=gene-NLI98_RS21375;Name=NLI98_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21375;old_locus_tag=NLI98_21370 NZ_CP100601.1 Protein Homology CDS 4415854 4416087 . - 0 ID=cds-WP_002888059.1;Parent=gene-NLI98_RS21375;Dbxref=Genbank:WP_002888059.1;Name=WP_002888059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225054.1;locus_tag=NLI98_RS21375;product=YgdI/YgdR family lipoprotein;protein_id=WP_002888059.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4416257 4419481 . - . ID=gene-NLI98_RS21380;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=NLI98_RS21380;old_locus_tag=NLI98_21375 NZ_CP100601.1 Protein Homology CDS 4416257 4419481 . - 0 ID=cds-WP_002888056.1;Parent=gene-NLI98_RS21380;Dbxref=Genbank:WP_002888056.1;Name=WP_002888056.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225053.1;locus_tag=NLI98_RS21380;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_002888056.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4419499 4420647 . - . ID=gene-NLI98_RS21385;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=NLI98_RS21385;old_locus_tag=NLI98_21380 NZ_CP100601.1 Protein Homology CDS 4419499 4420647 . - 0 ID=cds-WP_088498366.1;Parent=gene-NLI98_RS21385;Dbxref=Genbank:WP_088498366.1;Name=WP_088498366.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225052.1;locus_tag=NLI98_RS21385;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_088498366.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4421105 4421926 . - . ID=gene-NLI98_RS21390;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=NLI98_RS21390;old_locus_tag=NLI98_21385 NZ_CP100601.1 Protein Homology CDS 4421105 4421926 . - 0 ID=cds-WP_004151369.1;Parent=gene-NLI98_RS21390;Dbxref=Genbank:WP_004151369.1;Name=WP_004151369.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225049.1;locus_tag=NLI98_RS21390;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_004151369.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4422155 4423063 . - . ID=gene-NLI98_RS21395;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=NLI98_RS21395;old_locus_tag=NLI98_21390 NZ_CP100601.1 Protein Homology CDS 4422155 4423063 . - 0 ID=cds-WP_004222628.1;Parent=gene-NLI98_RS21395;Dbxref=Genbank:WP_004222628.1;Name=WP_004222628.1;Ontology_term=GO:0019361,GO:0046917;gbkey=CDS;gene=citG;go_function=triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=2'-(5''-triphosphoribosyl)-3'-dephospho-CoA biosynthetic process|0019361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225048.1;locus_tag=NLI98_RS21395;product=triphosphoribosyl-dephospho-CoA synthase CitG;protein_id=WP_004222628.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4423082 4424608 . - . ID=gene-NLI98_RS21400;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=NLI98_RS21400;old_locus_tag=NLI98_21395 NZ_CP100601.1 Protein Homology CDS 4423082 4424608 . - 0 ID=cds-WP_088498365.1;Parent=gene-NLI98_RS21400;Dbxref=Genbank:WP_088498365.1;Name=WP_088498365.1;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225047.1;locus_tag=NLI98_RS21400;product=citrate lyase subunit alpha;protein_id=WP_088498365.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4424619 4425488 . - . ID=gene-NLI98_RS21405;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=NLI98_RS21405;old_locus_tag=NLI98_21400 NZ_CP100601.1 Protein Homology CDS 4424619 4425488 . - 0 ID=cds-WP_004151372.1;Parent=gene-NLI98_RS21405;Dbxref=Genbank:WP_004151372.1;Name=WP_004151372.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citE;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225046.1;locus_tag=NLI98_RS21405;product=citrate (pro-3S)-lyase subunit beta;protein_id=WP_004151372.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4425485 4425778 . - . ID=gene-NLI98_RS21410;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=NLI98_RS21410;old_locus_tag=NLI98_21405 NZ_CP100601.1 Protein Homology CDS 4425485 4425778 . - 0 ID=cds-WP_004151373.1;Parent=gene-NLI98_RS21410;Dbxref=Genbank:WP_004151373.1;Name=WP_004151373.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citD;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225045.1;locus_tag=NLI98_RS21410;product=citrate lyase acyl carrier protein;protein_id=WP_004151373.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4425809 4426837 . - . ID=gene-NLI98_RS21415;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=NLI98_RS21415;old_locus_tag=NLI98_21410 NZ_CP100601.1 Protein Homology CDS 4425809 4426837 . - 0 ID=cds-WP_085205923.1;Parent=gene-NLI98_RS21415;Dbxref=Genbank:WP_085205923.1;Name=WP_085205923.1;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225044.1;locus_tag=NLI98_RS21415;product=[citrate (pro-3S)-lyase] ligase;protein_id=WP_085205923.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4427094 4428434 . + . ID=gene-NLI98_RS21420;Name=citS;gbkey=Gene;gene=citS;gene_biotype=protein_coding;locus_tag=NLI98_RS21420;old_locus_tag=NLI98_21415 NZ_CP100601.1 Protein Homology CDS 4427094 4428434 . + 0 ID=cds-WP_004151375.1;Parent=gene-NLI98_RS21420;Dbxref=Genbank:WP_004151375.1;Name=WP_004151375.1;gbkey=CDS;gene=citS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225043.1;locus_tag=NLI98_RS21420;product=citrate/sodium symporter CitS;protein_id=WP_004151375.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4428590 4428841 . + . ID=gene-NLI98_RS21425;Name=NLI98_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21425;old_locus_tag=NLI98_21420 NZ_CP100601.1 Protein Homology CDS 4428590 4428841 . + 0 ID=cds-WP_088498364.1;Parent=gene-NLI98_RS21425;Dbxref=Genbank:WP_088498364.1;Name=WP_088498364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225042.1;locus_tag=NLI98_RS21425;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_088498364.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4428857 4430638 . + . ID=gene-NLI98_RS21430;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=NLI98_RS21430;old_locus_tag=NLI98_21425 NZ_CP100601.1 Protein Homology CDS 4428857 4430638 . + 0 ID=cds-WP_102024149.1;Parent=gene-NLI98_RS21430;Dbxref=Genbank:WP_102024149.1;Name=WP_102024149.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225041.1;locus_tag=NLI98_RS21430;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_102024149.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4430654 4431955 . + . ID=gene-NLI98_RS21435;Name=NLI98_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21435;old_locus_tag=NLI98_21430 NZ_CP100601.1 Protein Homology CDS 4430654 4431955 . + 0 ID=cds-WP_088497950.1;Parent=gene-NLI98_RS21435;Dbxref=Genbank:WP_088497950.1;Name=WP_088497950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225040.1;locus_tag=NLI98_RS21435;product=oxaloacetate decarboxylase subunit beta;protein_id=WP_088497950.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4432127 4433755 . + . ID=gene-NLI98_RS21440;Name=NLI98_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21440;old_locus_tag=NLI98_21435 NZ_CP100601.1 Protein Homology CDS 4432127 4433755 . + 0 ID=cds-WP_004151379.1;Parent=gene-NLI98_RS21440;Dbxref=Genbank:WP_004151379.1;Name=WP_004151379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529045.1;locus_tag=NLI98_RS21440;product=sensor histidine kinase;protein_id=WP_004151379.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4433748 4434452 . + . ID=gene-NLI98_RS21445;Name=NLI98_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21445;old_locus_tag=NLI98_21440 NZ_CP100601.1 Protein Homology CDS 4433748 4434452 . + 0 ID=cds-WP_004222618.1;Parent=gene-NLI98_RS21445;Dbxref=Genbank:WP_004222618.1;Name=WP_004222618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225038.1;locus_tag=NLI98_RS21445;product=response regulator;protein_id=WP_004222618.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4434458 4435087 . - . ID=gene-NLI98_RS21450;Name=NLI98_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21450;old_locus_tag=NLI98_21445 NZ_CP100601.1 Protein Homology CDS 4434458 4435087 . - 0 ID=cds-WP_012737385.1;Parent=gene-NLI98_RS21450;Dbxref=Genbank:WP_012737385.1;Name=WP_012737385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225037.1;locus_tag=NLI98_RS21450;product=hypothetical protein;protein_id=WP_012737385.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4435180 4436109 . + . ID=gene-NLI98_RS21455;Name=NLI98_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21455;old_locus_tag=NLI98_21450 NZ_CP100601.1 Protein Homology CDS 4435180 4436109 . + 0 ID=cds-WP_040199969.1;Parent=gene-NLI98_RS21455;Dbxref=Genbank:WP_040199969.1;Name=WP_040199969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225036.1;locus_tag=NLI98_RS21455;product=LysR family transcriptional regulator;protein_id=WP_040199969.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4436057 4436422 . - . ID=gene-NLI98_RS21460;Name=NLI98_RS21460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21460;old_locus_tag=NLI98_21455 NZ_CP100601.1 Protein Homology CDS 4436057 4436422 . - 0 ID=cds-WP_088497949.1;Parent=gene-NLI98_RS21460;Dbxref=Genbank:WP_088497949.1;Name=WP_088497949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887984.1;locus_tag=NLI98_RS21460;product=DUF805 domain-containing protein;protein_id=WP_088497949.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4436453 4437367 . - . ID=gene-NLI98_RS21465;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=NLI98_RS21465;old_locus_tag=NLI98_21460 NZ_CP100601.1 Protein Homology CDS 4436453 4437367 . - 0 ID=cds-WP_002887981.1;Parent=gene-NLI98_RS21465;Dbxref=Genbank:WP_002887981.1;Name=WP_002887981.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225035.1;locus_tag=NLI98_RS21465;product=ribonucleoside hydrolase RihC;protein_id=WP_002887981.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4437434 4438384 . - . ID=gene-NLI98_RS21470;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=NLI98_RS21470;old_locus_tag=NLI98_21465 NZ_CP100601.1 Protein Homology CDS 4437434 4438384 . - 0 ID=cds-WP_002887979.1;Parent=gene-NLI98_RS21470;Dbxref=Genbank:WP_002887979.1;Name=WP_002887979.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124087.1;locus_tag=NLI98_RS21470;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_002887979.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4438386 4438835 . - . ID=gene-NLI98_RS21475;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=NLI98_RS21475;old_locus_tag=NLI98_21470 NZ_CP100601.1 Protein Homology CDS 4438386 4438835 . - 0 ID=cds-WP_002887976.1;Parent=gene-NLI98_RS21475;Dbxref=Genbank:WP_002887976.1;Name=WP_002887976.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225033.1;locus_tag=NLI98_RS21475;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_002887976.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4438951 4439451 . - . ID=gene-NLI98_RS21480;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=NLI98_RS21480;old_locus_tag=NLI98_21475 NZ_CP100601.1 Protein Homology CDS 4438951 4439451 . - 0 ID=cds-WP_002887973.1;Parent=gene-NLI98_RS21480;Dbxref=Genbank:WP_002887973.1;Name=WP_002887973.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225032.1;locus_tag=NLI98_RS21480;product=signal peptidase II;protein_id=WP_002887973.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4439451 4442267 . - . ID=gene-NLI98_RS21485;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=NLI98_RS21485;old_locus_tag=NLI98_21480 NZ_CP100601.1 Protein Homology CDS 4439451 4442267 . - 0 ID=cds-WP_004212580.1;Parent=gene-NLI98_RS21485;Dbxref=Genbank:WP_004212580.1;Name=WP_004212580.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124083.1;locus_tag=NLI98_RS21485;product=isoleucine--tRNA ligase;protein_id=WP_004212580.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4442311 4443249 . - . ID=gene-NLI98_RS21490;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=NLI98_RS21490;old_locus_tag=NLI98_21485 NZ_CP100601.1 Protein Homology CDS 4442311 4443249 . - 0 ID=cds-WP_002887969.1;Parent=gene-NLI98_RS21490;Dbxref=Genbank:WP_002887969.1;Name=WP_002887969.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204236.1;locus_tag=NLI98_RS21490;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_002887969.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4443579 4443842 . + . ID=gene-NLI98_RS21495;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=NLI98_RS21495;old_locus_tag=NLI98_21490 NZ_CP100601.1 Protein Homology CDS 4443579 4443842 . + 0 ID=cds-WP_002887965.1;Parent=gene-NLI98_RS21495;Dbxref=Genbank:WP_002887965.1;Name=WP_002887965.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1;locus_tag=NLI98_RS21495;product=30S ribosomal protein S20;protein_id=WP_002887965.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4443962 4444858 . - . ID=gene-NLI98_RS21500;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=NLI98_RS21500;old_locus_tag=NLI98_21495 NZ_CP100601.1 Protein Homology CDS 4443962 4444858 . - 0 ID=cds-WP_002887961.1;Parent=gene-NLI98_RS21500;Dbxref=Genbank:WP_002887961.1;Name=WP_002887961.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225027.1;locus_tag=NLI98_RS21500;product=transcriptional activator NhaR;protein_id=WP_002887961.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4444913 4446088 . - . ID=gene-NLI98_RS21505;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=NLI98_RS21505;old_locus_tag=NLI98_21500 NZ_CP100601.1 Protein Homology CDS 4444913 4446088 . - 0 ID=cds-WP_004192071.1;Parent=gene-NLI98_RS21505;Dbxref=Genbank:WP_004192071.1;Name=WP_004192071.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831528.1;locus_tag=NLI98_RS21505;product=Na+/H+ antiporter NhaA;protein_id=WP_004192071.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4446266 4447399 . - . ID=gene-NLI98_RS21510;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=NLI98_RS21510;old_locus_tag=NLI98_21505 NZ_CP100601.1 Protein Homology CDS 4446266 4447399 . - 0 ID=cds-WP_002887955.1;Parent=gene-NLI98_RS21510;Dbxref=Genbank:WP_002887955.1;Name=WP_002887955.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225025.1;locus_tag=NLI98_RS21510;product=molecular chaperone DnaJ;protein_id=WP_002887955.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4447487 4449403 . - . ID=gene-NLI98_RS21515;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=NLI98_RS21515;old_locus_tag=NLI98_21510 NZ_CP100601.1 Protein Homology CDS 4447487 4449403 . - 0 ID=cds-WP_004146997.1;Parent=gene-NLI98_RS21515;Dbxref=Genbank:WP_004146997.1;Name=WP_004146997.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=NLI98_RS21515;product=molecular chaperone DnaK;protein_id=WP_004146997.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4449789 4450193 . + . ID=gene-NLI98_RS21520;Name=NLI98_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21520;old_locus_tag=NLI98_21515 NZ_CP100601.1 Protein Homology CDS 4449789 4450193 . + 0 ID=cds-WP_004222594.1;Parent=gene-NLI98_RS21520;Dbxref=Genbank:WP_004222594.1;Name=WP_004222594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225023.1;locus_tag=NLI98_RS21520;product=DUF2541 family protein;protein_id=WP_004222594.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4450221 4450970 . + . ID=gene-NLI98_RS21525;Name=msyB;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=NLI98_RS21525;old_locus_tag=NLI98_21520 NZ_CP100601.1 Protein Homology CDS 4450221 4450970 . + 0 ID=cds-WP_023316440.1;Parent=gene-NLI98_RS21525;Dbxref=Genbank:WP_023316440.1;Name=WP_023316440.1;gbkey=CDS;gene=msyB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225022.1;locus_tag=NLI98_RS21525;product=acidic protein MsyB;protein_id=WP_023316440.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4451059 4451625 . + . ID=gene-NLI98_RS21530;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=NLI98_RS21530;old_locus_tag=NLI98_21525 NZ_CP100601.1 Protein Homology CDS 4451059 4451625 . + 0 ID=cds-WP_002887905.1;Parent=gene-NLI98_RS21530;Dbxref=Genbank:WP_002887905.1;Name=WP_002887905.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225021.1;locus_tag=NLI98_RS21530;product=acetate uptake transporter;protein_id=WP_002887905.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4451688 4452992 . - . ID=gene-NLI98_RS21535;Name=NLI98_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21535;old_locus_tag=NLI98_21530 NZ_CP100601.1 Protein Homology CDS 4451688 4452992 . - 0 ID=cds-WP_088497948.1;Parent=gene-NLI98_RS21535;Dbxref=Genbank:WP_088497948.1;Name=WP_088497948.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225020.1;locus_tag=NLI98_RS21535;product=MFS transporter;protein_id=WP_088497948.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4453112 4453699 . - . ID=gene-NLI98_RS21540;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=NLI98_RS21540;old_locus_tag=NLI98_21535 NZ_CP100601.1 Protein Homology CDS 4453112 4453699 . - 0 ID=cds-WP_002887898.1;Parent=gene-NLI98_RS21540;Dbxref=Genbank:WP_002887898.1;Name=WP_002887898.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225019.1;locus_tag=NLI98_RS21540;product=molybdopterin adenylyltransferase;protein_id=WP_002887898.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4453799 4454752 . - . ID=gene-NLI98_RS21545;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=NLI98_RS21545;old_locus_tag=NLI98_21540 NZ_CP100601.1 Protein Homology CDS 4453799 4454752 . - 0 ID=cds-WP_002887897.1;Parent=gene-NLI98_RS21545;Dbxref=Genbank:WP_002887897.1;Name=WP_002887897.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;gene=tal;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225018.1;locus_tag=NLI98_RS21545;product=transaldolase;protein_id=WP_002887897.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4454955 4456385 . + . ID=gene-NLI98_RS21550;Name=NLI98_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21550;old_locus_tag=NLI98_21545 NZ_CP100601.1 Protein Homology CDS 4454955 4456385 . + 0 ID=cds-WP_002887871.1;Parent=gene-NLI98_RS21550;Dbxref=Genbank:WP_002887871.1;Name=WP_002887871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225017.1;locus_tag=NLI98_RS21550;product=sodium:alanine symporter family protein;protein_id=WP_002887871.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4456463 4457236 . + . ID=gene-NLI98_RS21555;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=NLI98_RS21555;old_locus_tag=NLI98_21550 NZ_CP100601.1 Protein Homology CDS 4456463 4457236 . + 0 ID=cds-WP_004178561.1;Parent=gene-NLI98_RS21555;Dbxref=Genbank:WP_004178561.1;Name=WP_004178561.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225016.1;locus_tag=NLI98_RS21555;product=peroxide stress protein YaaA;protein_id=WP_004178561.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4457305 4457682 . - . ID=gene-NLI98_RS21560;Name=NLI98_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21560;old_locus_tag=NLI98_21555 NZ_CP100601.1 Protein Homology CDS 4457305 4457682 . - 0 ID=cds-WP_002887866.1;Parent=gene-NLI98_RS21560;Dbxref=Genbank:WP_002887866.1;Name=WP_002887866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225015.1;locus_tag=NLI98_RS21560;product=hypothetical protein;protein_id=WP_002887866.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4457997 4459277 . - . ID=gene-NLI98_RS21565;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=NLI98_RS21565;old_locus_tag=NLI98_21560 NZ_CP100601.1 Protein Homology CDS 4457997 4459277 . - 0 ID=cds-WP_002887863.1;Parent=gene-NLI98_RS21565;Dbxref=Genbank:WP_002887863.1;Name=WP_002887863.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225014.1;locus_tag=NLI98_RS21565;product=threonine synthase;protein_id=WP_002887863.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4459281 4460210 . - . ID=gene-NLI98_RS21570;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=NLI98_RS21570;old_locus_tag=NLI98_21565 NZ_CP100601.1 Protein Homology CDS 4459281 4460210 . - 0 ID=cds-WP_002887853.1;Parent=gene-NLI98_RS21570;Dbxref=Genbank:WP_002887853.1;Name=WP_002887853.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225013.1;locus_tag=NLI98_RS21570;product=homoserine kinase;protein_id=WP_002887853.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4460212 4462674 . - . ID=gene-NLI98_RS21575;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=NLI98_RS21575;old_locus_tag=NLI98_21570 NZ_CP100601.1 Protein Homology CDS 4460212 4462674 . - 0 ID=cds-WP_002887848.1;Parent=gene-NLI98_RS21575;Dbxref=Genbank:WP_002887848.1;Name=WP_002887848.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124053.1;locus_tag=NLI98_RS21575;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_002887848.1;transl_table=11 NZ_CP100601.1 cmsearch sequence_feature 4462700 4462817 . - . ID=id-NZ_CP100601.1:4462700..4462817;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.1 NZ_CP100601.1 RefSeq gene 4462756 4462824 . - . ID=gene-NLI98_RS21580;Name=thrL;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=NLI98_RS21580;old_locus_tag=NLI98_21575 NZ_CP100601.1 Protein Homology CDS 4462756 4462824 . - 0 ID=cds-WP_004222578.1;Parent=gene-NLI98_RS21580;Dbxref=Genbank:WP_004222578.1;Name=WP_004222578.1;Ontology_term=GO:0031554,GO:0031556;gbkey=CDS;gene=thrL;go_process=regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004222578.1;locus_tag=NLI98_RS21580;product=thr operon leader peptide;protein_id=WP_004222578.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4463036 4463722 . - . ID=gene-NLI98_RS21585;Name=NLI98_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21585;old_locus_tag=NLI98_21580 NZ_CP100601.1 Protein Homology CDS 4463036 4463722 . - 0 ID=cds-WP_002887846.1;Parent=gene-NLI98_RS21585;Dbxref=Genbank:WP_002887846.1;Name=WP_002887846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225010.1;locus_tag=NLI98_RS21585;product=tRNA/rRNA methyltransferase;protein_id=WP_002887846.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4464119 4464259 . - . ID=gene-NLI98_RS21590;Name=NLI98_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21590;old_locus_tag=NLI98_21585 NZ_CP100601.1 Protein Homology CDS 4464119 4464259 . - 0 ID=cds-WP_004146984.1;Parent=gene-NLI98_RS21590;Dbxref=Genbank:WP_004146984.1;Name=WP_004146984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463455.1;locus_tag=NLI98_RS21590;product=hypothetical protein;protein_id=WP_004146984.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4464355 4465071 . + . ID=gene-NLI98_RS21595;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=NLI98_RS21595;old_locus_tag=NLI98_21590 NZ_CP100601.1 Protein Homology CDS 4464355 4465071 . + 0 ID=cds-WP_002887843.1;Parent=gene-NLI98_RS21595;Dbxref=Genbank:WP_002887843.1;Name=WP_002887843.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003621071.1;locus_tag=NLI98_RS21595;product=two-component system response regulator ArcA;protein_id=WP_002887843.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4465134 4466492 . - . ID=gene-NLI98_RS21600;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=NLI98_RS21600;old_locus_tag=NLI98_21595 NZ_CP100601.1 Protein Homology CDS 4465134 4466492 . - 0 ID=cds-WP_167876180.1;Parent=gene-NLI98_RS21600;Dbxref=Genbank:WP_167876180.1;Name=WP_167876180.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225008.1;locus_tag=NLI98_RS21600;product=cell envelope integrity protein CreD;protein_id=WP_167876180.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4466553 4467977 . - . ID=gene-NLI98_RS21605;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=NLI98_RS21605;old_locus_tag=NLI98_21600 NZ_CP100601.1 Protein Homology CDS 4466553 4467977 . - 0 ID=cds-WP_021313587.1;Parent=gene-NLI98_RS21605;Dbxref=Genbank:WP_021313587.1;Name=WP_021313587.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225007.1;locus_tag=NLI98_RS21605;product=two-component system sensor histidine kinase CreC;protein_id=WP_021313587.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4467977 4468666 . - . ID=gene-NLI98_RS21610;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=NLI98_RS21610;old_locus_tag=NLI98_21605 NZ_CP100601.1 Protein Homology CDS 4467977 4468666 . - 0 ID=cds-WP_048289761.1;Parent=gene-NLI98_RS21610;Dbxref=Genbank:WP_048289761.1;Name=WP_048289761.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225006.1;locus_tag=NLI98_RS21610;product=two-component system response regulator CreB;protein_id=WP_048289761.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4468679 4469152 . - . ID=gene-NLI98_RS21615;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=NLI98_RS21615;old_locus_tag=NLI98_21610 NZ_CP100601.1 Protein Homology CDS 4468679 4469152 . - 0 ID=cds-WP_002887814.1;Parent=gene-NLI98_RS21615;Dbxref=Genbank:WP_002887814.1;Name=WP_002887814.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225005.1;locus_tag=NLI98_RS21615;product=protein CreA;protein_id=WP_002887814.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4469362 4470231 . + . ID=gene-NLI98_RS21620;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=NLI98_RS21620;old_locus_tag=NLI98_21615 NZ_CP100601.1 Protein Homology CDS 4469362 4470231 . + 0 ID=cds-WP_002887812.1;Parent=gene-NLI98_RS21620;Dbxref=Genbank:WP_002887812.1;Name=WP_002887812.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225004.1;locus_tag=NLI98_RS21620;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_002887812.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4470228 4470875 . - . ID=gene-NLI98_RS21625;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=NLI98_RS21625;old_locus_tag=NLI98_21620 NZ_CP100601.1 Protein Homology CDS 4470228 4470875 . - 0 ID=cds-WP_002887811.1;Parent=gene-NLI98_RS21625;Dbxref=Genbank:WP_002887811.1;Name=WP_002887811.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225003.1;locus_tag=NLI98_RS21625;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_002887811.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4470989 4471504 . + . ID=gene-NLI98_RS21630;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=NLI98_RS21630;old_locus_tag=NLI98_21625 NZ_CP100601.1 Protein Homology CDS 4470989 4471504 . + 0 ID=cds-WP_024622967.1;Parent=gene-NLI98_RS21630;Dbxref=Genbank:WP_024622967.1;Name=WP_024622967.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225002.1;locus_tag=NLI98_RS21630;product=inosine/xanthosine triphosphatase;protein_id=WP_024622967.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4471491 4471820 . - . ID=gene-NLI98_RS21635;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=NLI98_RS21635;old_locus_tag=NLI98_21630 NZ_CP100601.1 Protein Homology CDS 4471491 4471820 . - 0 ID=cds-WP_002887809.1;Parent=gene-NLI98_RS21635;Dbxref=Genbank:WP_002887809.1;Name=WP_002887809.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225001.1;locus_tag=NLI98_RS21635;product=trp operon repressor;protein_id=WP_002887809.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4471909 4473846 . - . ID=gene-NLI98_RS21640;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=NLI98_RS21640;old_locus_tag=NLI98_21635 NZ_CP100601.1 Protein Homology CDS 4471909 4473846 . - 0 ID=cds-WP_088497951.1;Parent=gene-NLI98_RS21640;Dbxref=Genbank:WP_088497951.1;Name=WP_088497951.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225000.1;locus_tag=NLI98_RS21640;product=murein transglycosylase;protein_id=WP_088497951.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4474075 4475742 . + . ID=gene-NLI98_RS21645;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=NLI98_RS21645;old_locus_tag=NLI98_21640 NZ_CP100601.1 Protein Homology CDS 4474075 4475742 . + 0 ID=cds-WP_002887805.1;Parent=gene-NLI98_RS21645;Dbxref=Genbank:WP_002887805.1;Name=WP_002887805.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017145039.1;locus_tag=NLI98_RS21645;product=energy-dependent translational throttle protein EttA;protein_id=WP_002887805.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4475836 4477068 . - . ID=gene-NLI98_RS21650;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=NLI98_RS21650;old_locus_tag=NLI98_21645 NZ_CP100601.1 Protein Homology CDS 4475836 4477068 . - 0 ID=cds-WP_002887802.1;Parent=gene-NLI98_RS21650;Dbxref=Genbank:WP_002887802.1;Name=WP_002887802.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224998.1;locus_tag=NLI98_RS21650;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_002887802.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4477090 4478472 . - . ID=gene-NLI98_RS21655;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=NLI98_RS21655;old_locus_tag=NLI98_21650 NZ_CP100601.1 Protein Homology CDS 4477090 4478472 . - 0 ID=cds-WP_002887800.1;Parent=gene-NLI98_RS21655;Dbxref=Genbank:WP_002887800.1;Name=WP_002887800.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001399683.1;locus_tag=NLI98_RS21655;product=DNA repair protein RadA;protein_id=WP_002887800.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4478482 4479453 . - . ID=gene-NLI98_RS21660;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=NLI98_RS21660;old_locus_tag=NLI98_21655 NZ_CP100601.1 Protein Homology CDS 4478482 4479453 . - 0 ID=cds-WP_004177487.1;Parent=gene-NLI98_RS21660;Dbxref=Genbank:WP_004177487.1;Name=WP_004177487.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224996.1;locus_tag=NLI98_RS21660;product=phosphoserine phosphatase;protein_id=WP_004177487.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4479558 4480205 . + . ID=gene-NLI98_RS21665;Name=NLI98_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21665;old_locus_tag=NLI98_21660 NZ_CP100601.1 Protein Homology CDS 4479558 4480205 . + 0 ID=cds-WP_002887794.1;Parent=gene-NLI98_RS21665;Dbxref=Genbank:WP_002887794.1;Name=WP_002887794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224995.1;locus_tag=NLI98_RS21665;product=YtjB family periplasmic protein;protein_id=WP_002887794.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4480205 4481221 . + . ID=gene-NLI98_RS21670;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=NLI98_RS21670;old_locus_tag=NLI98_21665 NZ_CP100601.1 Protein Homology CDS 4480205 4481221 . + 0 ID=cds-WP_004146971.1;Parent=gene-NLI98_RS21670;Dbxref=Genbank:WP_004146971.1;Name=WP_004146971.1;gbkey=CDS;gene=lplA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224994.1;locus_tag=NLI98_RS21670;product=lipoate--protein ligase LplA;protein_id=WP_004146971.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4481302 4482021 . - . ID=gene-NLI98_RS21675;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=NLI98_RS21675;old_locus_tag=NLI98_21670 NZ_CP100601.1 Protein Homology CDS 4481302 4482021 . - 0 ID=cds-WP_002887789.1;Parent=gene-NLI98_RS21675;Dbxref=Genbank:WP_002887789.1;Name=WP_002887789.1;Ontology_term=GO:0043096,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=purine nucleobase salvage|0043096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224993.1;locus_tag=NLI98_RS21675;product=purine-nucleoside phosphorylase;protein_id=WP_002887789.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4482124 4483347 . - . ID=gene-NLI98_RS21680;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=NLI98_RS21680;old_locus_tag=NLI98_21675 NZ_CP100601.1 Protein Homology CDS 4482124 4483347 . - 0 ID=cds-WP_004178550.1;Parent=gene-NLI98_RS21680;Dbxref=Genbank:WP_004178550.1;Name=WP_004178550.1;Ontology_term=GO:0006139,GO:0008973;gbkey=CDS;gene=deoB;go_function=phosphopentomutase activity|0008973||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224992.1;locus_tag=NLI98_RS21680;product=phosphopentomutase;protein_id=WP_004178550.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4483400 4484722 . - . ID=gene-NLI98_RS21685;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=NLI98_RS21685;old_locus_tag=NLI98_21680 NZ_CP100601.1 Protein Homology CDS 4483400 4484722 . - 0 ID=cds-WP_002887787.1;Parent=gene-NLI98_RS21685;Dbxref=Genbank:WP_002887787.1;Name=WP_002887787.1;Ontology_term=GO:0006139,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224991.1;locus_tag=NLI98_RS21685;product=thymidine phosphorylase;protein_id=WP_002887787.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4484836 4485615 . - . ID=gene-NLI98_RS21690;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=NLI98_RS21690;old_locus_tag=NLI98_21685 NZ_CP100601.1 Protein Homology CDS 4484836 4485615 . - 0 ID=cds-WP_023325440.1;Parent=gene-NLI98_RS21690;Dbxref=Genbank:WP_023325440.1;Name=WP_023325440.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005097947.1;locus_tag=NLI98_RS21690;product=deoxyribose-phosphate aldolase;protein_id=WP_023325440.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4486032 4487309 . - . ID=gene-NLI98_RS21695;Name=NLI98_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21695;old_locus_tag=NLI98_21690 NZ_CP100601.1 Protein Homology CDS 4486032 4487309 . - 0 ID=cds-WP_004146034.1;Parent=gene-NLI98_RS21695;Dbxref=Genbank:WP_004146034.1;Name=WP_004146034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224989.1;locus_tag=NLI98_RS21695;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_004146034.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4487440 4488234 . - . ID=gene-NLI98_RS21700;Name=NLI98_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21700;old_locus_tag=NLI98_21695 NZ_CP100601.1 Protein Homology CDS 4487440 4488234 . - 0 ID=cds-WP_088497947.1;Parent=gene-NLI98_RS21700;Dbxref=Genbank:WP_088497947.1;Name=WP_088497947.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224988.1;locus_tag=NLI98_RS21700;product=TatD family hydrolase;protein_id=WP_088497947.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4488231 4489304 . - . ID=gene-NLI98_RS21705;Name=NLI98_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21705;old_locus_tag=NLI98_21700 NZ_CP100601.1 Protein Homology CDS 4488231 4489304 . - 0 ID=cds-WP_004146038.1;Parent=gene-NLI98_RS21705;Dbxref=Genbank:WP_004146038.1;Name=WP_004146038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224987.1;locus_tag=NLI98_RS21705;product=patatin family protein;protein_id=WP_004146038.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4489458 4489619 . - . ID=gene-NLI98_RS21710;Name=NLI98_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21710;old_locus_tag=NLI98_21705 NZ_CP100601.1 Protein Homology CDS 4489458 4489619 . - 0 ID=cds-WP_002887716.1;Parent=gene-NLI98_RS21710;Dbxref=Genbank:WP_002887716.1;Name=WP_002887716.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887716.1;locus_tag=NLI98_RS21710;product=DUF1328 domain-containing protein;protein_id=WP_002887716.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4489749 4490369 . - . ID=gene-NLI98_RS21715;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=NLI98_RS21715;old_locus_tag=NLI98_21710 NZ_CP100601.1 Protein Homology CDS 4489749 4490369 . - 0 ID=cds-WP_004146042.1;Parent=gene-NLI98_RS21715;Dbxref=Genbank:WP_004146042.1;Name=WP_004146042.1;gbkey=CDS;gene=osmY;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224985.1;locus_tag=NLI98_RS21715;product=molecular chaperone OsmY;protein_id=WP_004146042.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4490588 4492177 . - . ID=gene-NLI98_RS21720;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=NLI98_RS21720;old_locus_tag=NLI98_21715 NZ_CP100601.1 Protein Homology CDS 4490588 4492177 . - 0 ID=cds-WP_002887711.1;Parent=gene-NLI98_RS21720;Dbxref=Genbank:WP_002887711.1;Name=WP_002887711.1;Ontology_term=GO:0006415,GO:0003747,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123889.1;locus_tag=NLI98_RS21720;product=peptide chain release factor 3;protein_id=WP_002887711.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4492268 4492945 . - . ID=gene-NLI98_RS21725;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=NLI98_RS21725;old_locus_tag=NLI98_21720 NZ_CP100601.1 Protein Homology CDS 4492268 4492945 . - 0 ID=cds-WP_004146044.1;Parent=gene-NLI98_RS21725;Dbxref=Genbank:WP_004146044.1;Name=WP_004146044.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224983.1;locus_tag=NLI98_RS21725;product=pyrimidine 5'-nucleotidase;protein_id=WP_004146044.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4492960 4493406 . - . ID=gene-NLI98_RS21730;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=NLI98_RS21730;old_locus_tag=NLI98_21725 NZ_CP100601.1 Protein Homology CDS 4492960 4493406 . - 0 ID=cds-WP_088497946.1;Parent=gene-NLI98_RS21730;Dbxref=Genbank:WP_088497946.1;Name=WP_088497946.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224982.1;locus_tag=NLI98_RS21730;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_088497946.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4493375 4493788 . - . ID=gene-NLI98_RS21735;Name=NLI98_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21735;old_locus_tag=NLI98_21730 NZ_CP100601.1 Protein Homology CDS 4493375 4493788 . - 0 ID=cds-WP_004146046.1;Parent=gene-NLI98_RS21735;Dbxref=Genbank:WP_004146046.1;Name=WP_004146046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224981.1;locus_tag=NLI98_RS21735;product=DNA polymerase III subunit psi;protein_id=WP_004146046.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4493891 4494919 . + . ID=gene-NLI98_RS21740;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=NLI98_RS21740;old_locus_tag=NLI98_21735 NZ_CP100601.1 Protein Homology CDS 4493891 4494919 . + 0 ID=cds-WP_048999870.1;Parent=gene-NLI98_RS21740;Dbxref=Genbank:WP_048999870.1;Name=WP_048999870.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224980.1;locus_tag=NLI98_RS21740;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_048999870.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4495091 4495177 . + . ID=gene-NLI98_RS21745;Name=NLI98_RS21745;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS21745;old_locus_tag=NLI98_21740 NZ_CP100601.1 tRNAscan-SE tRNA 4495091 4495177 . + . ID=rna-NLI98_RS21745;Parent=gene-NLI98_RS21745;anticodon=(pos:4495125..4495127);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS21745;product=tRNA-Leu NZ_CP100601.1 tRNAscan-SE exon 4495091 4495177 . + . ID=exon-NLI98_RS21745-1;Parent=rna-NLI98_RS21745;anticodon=(pos:4495125..4495127);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS21745;product=tRNA-Leu NZ_CP100601.1 RefSeq gene 4495206 4495292 . + . ID=gene-NLI98_RS21750;Name=NLI98_RS21750;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS21750;old_locus_tag=NLI98_21745 NZ_CP100601.1 tRNAscan-SE tRNA 4495206 4495292 . + . ID=rna-NLI98_RS21750;Parent=gene-NLI98_RS21750;anticodon=(pos:4495240..4495242);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS21750;product=tRNA-Leu NZ_CP100601.1 tRNAscan-SE exon 4495206 4495292 . + . ID=exon-NLI98_RS21750-1;Parent=rna-NLI98_RS21750;anticodon=(pos:4495240..4495242);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS21750;product=tRNA-Leu NZ_CP100601.1 RefSeq gene 4495324 4495410 . + . ID=gene-NLI98_RS21755;Name=NLI98_RS21755;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS21755;old_locus_tag=NLI98_21750 NZ_CP100601.1 tRNAscan-SE tRNA 4495324 4495410 . + . ID=rna-NLI98_RS21755;Parent=gene-NLI98_RS21755;anticodon=(pos:4495358..4495360);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS21755;product=tRNA-Leu NZ_CP100601.1 tRNAscan-SE exon 4495324 4495410 . + . ID=exon-NLI98_RS21755-1;Parent=rna-NLI98_RS21755;anticodon=(pos:4495358..4495360);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS21755;product=tRNA-Leu NZ_CP100601.1 RefSeq gene 4495432 4495671 . - . ID=gene-NLI98_RS21760;Name=NLI98_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21760;old_locus_tag=NLI98_21755 NZ_CP100601.1 Protein Homology CDS 4495432 4495671 . - 0 ID=cds-WP_002887654.1;Parent=gene-NLI98_RS21760;Dbxref=Genbank:WP_002887654.1;Name=WP_002887654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002887654.1;locus_tag=NLI98_RS21760;product=DUF1435 domain-containing protein;protein_id=WP_002887654.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4495742 4495912 . + . ID=gene-NLI98_RS21765;Name=NLI98_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21765;old_locus_tag=NLI98_21760 NZ_CP100601.1 Protein Homology CDS 4495742 4495912 . + 0 ID=cds-WP_004221147.1;Parent=gene-NLI98_RS21765;Dbxref=Genbank:WP_004221147.1;Name=WP_004221147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224978.1;locus_tag=NLI98_RS21765;product=hypothetical protein;protein_id=WP_004221147.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4495936 4496982 . + . ID=gene-NLI98_RS21770;Name=NLI98_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21770;old_locus_tag=NLI98_21765 NZ_CP100601.1 Protein Homology CDS 4495936 4496982 . + 0 ID=cds-WP_020802799.1;Parent=gene-NLI98_RS21770;Dbxref=Genbank:WP_020802799.1;Name=WP_020802799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224977.1;locus_tag=NLI98_RS21770;product=GGDEF domain-containing protein;protein_id=WP_020802799.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4497089 4497877 . + . ID=gene-NLI98_RS21775;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=NLI98_RS21775;old_locus_tag=NLI98_21770 NZ_CP100601.1 Protein Homology CDS 4497089 4497877 . + 0 ID=cds-WP_002887652.1;Parent=gene-NLI98_RS21775;Dbxref=Genbank:WP_002887652.1;Name=WP_002887652.1;Ontology_term=GO:0051537;gbkey=CDS;gene=fhuF;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224976.1;locus_tag=NLI98_RS21775;product=siderophore-iron reductase FhuF;protein_id=WP_002887652.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4497927 4499270 . - . ID=gene-NLI98_RS21780;Name=NLI98_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21780;old_locus_tag=NLI98_21775 NZ_CP100601.1 Protein Homology CDS 4497927 4499270 . - 0 ID=cds-WP_002887650.1;Parent=gene-NLI98_RS21780;Dbxref=Genbank:WP_002887650.1;Name=WP_002887650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224975.1;locus_tag=NLI98_RS21780;product=PTS cellobiose transporter subunit IIC;protein_id=WP_002887650.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4499609 4500067 . + . ID=gene-NLI98_RS21785;Name=NLI98_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21785;old_locus_tag=NLI98_21780 NZ_CP100601.1 Protein Homology CDS 4499609 4500067 . + 0 ID=cds-WP_004151383.1;Parent=gene-NLI98_RS21785;Dbxref=Genbank:WP_004151383.1;Name=WP_004151383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224974.1;locus_tag=NLI98_RS21785;product=YbaK/EbsC family protein;protein_id=WP_004151383.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4500073 4500747 . - . ID=gene-NLI98_RS21790;Name=bglJ;gbkey=Gene;gene=bglJ;gene_biotype=protein_coding;locus_tag=NLI98_RS21790;old_locus_tag=NLI98_21785 NZ_CP100601.1 Protein Homology CDS 4500073 4500747 . - 0 ID=cds-WP_002887647.1;Parent=gene-NLI98_RS21790;Dbxref=Genbank:WP_002887647.1;Name=WP_002887647.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=bglJ;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224973.1;locus_tag=NLI98_RS21790;product=DNA-binding transcriptional activator BglJ;protein_id=WP_002887647.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4500708 4501430 . - . ID=gene-NLI98_RS21795;Name=NLI98_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21795;old_locus_tag=NLI98_21790 NZ_CP100601.1 Protein Homology CDS 4500708 4501430 . - 0 ID=cds-WP_002887645.1;Parent=gene-NLI98_RS21795;Dbxref=Genbank:WP_002887645.1;Name=WP_002887645.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224972.1;locus_tag=NLI98_RS21795;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_002887645.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4501696 4502577 . - . ID=gene-NLI98_RS21800;Name=NLI98_RS21800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21800;old_locus_tag=NLI98_21795 NZ_CP100601.1 Protein Homology CDS 4501696 4502577 . - 0 ID=cds-WP_002887643.1;Parent=gene-NLI98_RS21800;Dbxref=Genbank:WP_002887643.1;Name=WP_002887643.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224971.1;locus_tag=NLI98_RS21800;product=helix-turn-helix domain-containing protein;protein_id=WP_002887643.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4502594 4503778 . - . ID=gene-NLI98_RS21805;Name=pobA;gbkey=Gene;gene=pobA;gene_biotype=protein_coding;locus_tag=NLI98_RS21805;old_locus_tag=NLI98_21800 NZ_CP100601.1 Protein Homology CDS 4502594 4503778 . - 0 ID=cds-WP_004146953.1;Parent=gene-NLI98_RS21805;Dbxref=Genbank:WP_004146953.1;Name=WP_004146953.1;Ontology_term=GO:0018874,GO:0018659;gbkey=CDS;gene=pobA;go_function=4-hydroxybenzoate 3-monooxygenase activity|0018659||IEA;go_process=benzoate metabolic process|0018874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224970.1;locus_tag=NLI98_RS21805;product=4-hydroxybenzoate 3-monooxygenase;protein_id=WP_004146953.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4504056 4504832 . + . ID=gene-NLI98_RS21810;Name=NLI98_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21810;old_locus_tag=NLI98_21805 NZ_CP100601.1 Protein Homology CDS 4504056 4504832 . + 0 ID=cds-WP_016946263.1;Parent=gene-NLI98_RS21810;Dbxref=Genbank:WP_016946263.1;Name=WP_016946263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224968.1;locus_tag=NLI98_RS21810;product=threonine/serine exporter ThrE family protein;protein_id=WP_016946263.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4504823 4505296 . + . ID=gene-NLI98_RS21815;Name=NLI98_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21815;old_locus_tag=NLI98_21810 NZ_CP100601.1 Protein Homology CDS 4504823 4505296 . + 0 ID=cds-WP_002887631.1;Parent=gene-NLI98_RS21815;Dbxref=Genbank:WP_002887631.1;Name=WP_002887631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224967.1;locus_tag=NLI98_RS21815;product=threonine/serine exporter;protein_id=WP_002887631.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4505399 4505938 . + . ID=gene-NLI98_RS21820;Name=dnaT;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=NLI98_RS21820;old_locus_tag=NLI98_21815 NZ_CP100601.1 Protein Homology CDS 4505399 4505938 . + 0 ID=cds-WP_002887624.1;Parent=gene-NLI98_RS21820;Dbxref=Genbank:WP_002887624.1;Name=WP_002887624.1;gbkey=CDS;gene=dnaT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224966.1;locus_tag=NLI98_RS21820;product=primosomal protein DnaT;protein_id=WP_002887624.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4505941 4506678 . + . ID=gene-NLI98_RS21825;Name=dnaC;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=NLI98_RS21825;old_locus_tag=NLI98_21820 NZ_CP100601.1 Protein Homology CDS 4505941 4506678 . + 0 ID=cds-WP_002887623.1;Parent=gene-NLI98_RS21825;Dbxref=Genbank:WP_002887623.1;Name=WP_002887623.1;gbkey=CDS;gene=dnaC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224965.1;locus_tag=NLI98_RS21825;product=DNA replication protein DnaC;protein_id=WP_002887623.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4506744 4507235 . + . ID=gene-NLI98_RS21830;Name=NLI98_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21830;old_locus_tag=NLI98_21825 NZ_CP100601.1 Protein Homology CDS 4506744 4507235 . + 0 ID=cds-WP_002887620.1;Parent=gene-NLI98_RS21830;Dbxref=Genbank:WP_002887620.1;Name=WP_002887620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224964.1;locus_tag=NLI98_RS21830;product=DUF2501 domain-containing protein;protein_id=WP_002887620.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4507493 4509784 . + . ID=gene-NLI98_RS21835;Name=opgB;gbkey=Gene;gene=opgB;gene_biotype=protein_coding;locus_tag=NLI98_RS21835;old_locus_tag=NLI98_21830 NZ_CP100601.1 Protein Homology CDS 4507493 4509784 . + 0 ID=cds-WP_012737368.1;Parent=gene-NLI98_RS21835;Dbxref=Genbank:WP_012737368.1;Name=WP_012737368.1;Ontology_term=GO:0008484;gbkey=CDS;gene=opgB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224963.1;locus_tag=NLI98_RS21835;product=phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase;protein_id=WP_012737368.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4509839 4510783 . - . ID=gene-NLI98_RS21840;Name=NLI98_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21840;old_locus_tag=NLI98_21835 NZ_CP100601.1 Protein Homology CDS 4509839 4510783 . - 0 ID=cds-WP_014908029.1;Parent=gene-NLI98_RS21840;Dbxref=Genbank:WP_014908029.1;Name=WP_014908029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224962.1;locus_tag=NLI98_RS21840;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_014908029.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4510917 4511927 . - . ID=gene-NLI98_RS21845;Name=NLI98_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21845;old_locus_tag=NLI98_21840 NZ_CP100601.1 Protein Homology CDS 4510917 4511927 . - 0 ID=cds-WP_004146946.1;Parent=gene-NLI98_RS21845;Dbxref=Genbank:WP_004146946.1;Name=WP_004146946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224961.1;locus_tag=NLI98_RS21845;product=SIS domain-containing protein;protein_id=WP_004146946.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4511945 4513006 . - . ID=gene-NLI98_RS21850;Name=NLI98_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21850;old_locus_tag=NLI98_21845 NZ_CP100601.1 Protein Homology CDS 4511945 4513006 . - 0 ID=cds-WP_088497945.1;Parent=gene-NLI98_RS21850;Dbxref=Genbank:WP_088497945.1;Name=WP_088497945.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224960.1;locus_tag=NLI98_RS21850;product=SIS domain-containing protein;protein_id=WP_088497945.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4513019 4513870 . - . ID=gene-NLI98_RS21855;Name=NLI98_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21855;old_locus_tag=NLI98_21850 NZ_CP100601.1 Protein Homology CDS 4513019 4513870 . - 0 ID=cds-WP_004146068.1;Parent=gene-NLI98_RS21855;Dbxref=Genbank:WP_004146068.1;Name=WP_004146068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224959.1;locus_tag=NLI98_RS21855;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_004146068.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4513848 4514627 . - . ID=gene-NLI98_RS21860;Name=NLI98_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21860;old_locus_tag=NLI98_21855 NZ_CP100601.1 Protein Homology CDS 4513848 4514627 . - 0 ID=cds-WP_002887608.1;Parent=gene-NLI98_RS21860;Dbxref=Genbank:WP_002887608.1;Name=WP_002887608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224958.1;locus_tag=NLI98_RS21860;product=PTS sugar transporter subunit IIC;protein_id=WP_002887608.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4514644 4515114 . - . ID=gene-NLI98_RS21865;Name=NLI98_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21865;old_locus_tag=NLI98_21860 NZ_CP100601.1 Protein Homology CDS 4514644 4515114 . - 0 ID=cds-WP_004177515.1;Parent=gene-NLI98_RS21865;Dbxref=Genbank:WP_004177515.1;Name=WP_004177515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224957.1;locus_tag=NLI98_RS21865;product=PTS sugar transporter subunit IIB;protein_id=WP_004177515.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4515129 4515551 . - . ID=gene-NLI98_RS21870;Name=NLI98_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21870;old_locus_tag=NLI98_21865 NZ_CP100601.1 Protein Homology CDS 4515129 4515551 . - 0 ID=cds-WP_004177518.1;Parent=gene-NLI98_RS21870;Dbxref=Genbank:WP_004177518.1;Name=WP_004177518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224956.1;locus_tag=NLI98_RS21870;product=PTS sugar transporter subunit IIA;protein_id=WP_004177518.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4515652 4518417 . - . ID=gene-NLI98_RS21875;Name=NLI98_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21875;old_locus_tag=NLI98_21870 NZ_CP100601.1 Protein Homology CDS 4515652 4518417 . - 0 ID=cds-WP_088497944.1;Parent=gene-NLI98_RS21875;Dbxref=Genbank:WP_088497944.1;Name=WP_088497944.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224955.1;locus_tag=NLI98_RS21875;product=sigma-54-dependent transcriptional regulator;protein_id=WP_088497944.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4518554 4519999 . - . ID=gene-NLI98_RS21880;Name=NLI98_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21880;old_locus_tag=NLI98_21875 NZ_CP100601.1 Protein Homology CDS 4518554 4519999 . - 0 ID=cds-WP_088497943.1;Parent=gene-NLI98_RS21880;Dbxref=Genbank:WP_088497943.1;Name=WP_088497943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224954.1;locus_tag=NLI98_RS21880;product=tagaturonate reductase;protein_id=WP_088497943.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4520011 4521033 . - . ID=gene-NLI98_RS21885;Name=NLI98_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21885;old_locus_tag=NLI98_21880 NZ_CP100601.1 Protein Homology CDS 4520011 4521033 . - 0 ID=cds-WP_004151386.1;Parent=gene-NLI98_RS21885;Dbxref=Genbank:WP_004151386.1;Name=WP_004151386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224953.1;locus_tag=NLI98_RS21885;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_004151386.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4521170 4522084 . + . ID=gene-NLI98_RS21890;Name=NLI98_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21890;old_locus_tag=NLI98_21885 NZ_CP100601.1 Protein Homology CDS 4521170 4522084 . + 0 ID=cds-WP_004182856.1;Parent=gene-NLI98_RS21890;Dbxref=Genbank:WP_004182856.1;Name=WP_004182856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224952.1;locus_tag=NLI98_RS21890;product=GntR family transcriptional regulator;protein_id=WP_004182856.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4522264 4523625 . + . ID=gene-NLI98_RS21895;Name=NLI98_RS21895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21895;old_locus_tag=NLI98_21890 NZ_CP100601.1 Protein Homology CDS 4522264 4523625 . + 0 ID=cds-WP_016946270.1;Parent=gene-NLI98_RS21895;Dbxref=Genbank:WP_016946270.1;Name=WP_016946270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224951.1;locus_tag=NLI98_RS21895;product=MFS transporter;protein_id=WP_016946270.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4523629 4524465 . - . ID=gene-NLI98_RS21900;Name=NLI98_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21900;old_locus_tag=NLI98_21895 NZ_CP100601.1 Protein Homology CDS 4523629 4524465 . - 0 ID=cds-WP_040170633.1;Parent=gene-NLI98_RS21900;Dbxref=Genbank:WP_040170633.1;Name=WP_040170633.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224950.1;locus_tag=NLI98_RS21900;product=GNAT family N-acetyltransferase;protein_id=WP_040170633.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4524498 4525031 . + . ID=gene-NLI98_RS21905;Name=NLI98_RS21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21905;old_locus_tag=NLI98_21900 NZ_CP100601.1 Protein Homology CDS 4524498 4525031 . + 0 ID=cds-WP_002887560.1;Parent=gene-NLI98_RS21905;Dbxref=Genbank:WP_002887560.1;Name=WP_002887560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146075.1;locus_tag=NLI98_RS21905;product=GNAT family N-acetyltransferase;protein_id=WP_002887560.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4525101 4525964 . + . ID=gene-NLI98_RS21910;Name=NLI98_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21910;old_locus_tag=NLI98_21905 NZ_CP100601.1 Protein Homology CDS 4525101 4525964 . + 0 ID=cds-WP_004177525.1;Parent=gene-NLI98_RS21910;Dbxref=Genbank:WP_004177525.1;Name=WP_004177525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224948.1;locus_tag=NLI98_RS21910;product=MurR/RpiR family transcriptional regulator;protein_id=WP_004177525.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4525961 4526560 . - . ID=gene-NLI98_RS21915;Name=NLI98_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21915;old_locus_tag=NLI98_21910 NZ_CP100601.1 Protein Homology CDS 4525961 4526560 . - 0 ID=cds-WP_004146077.1;Parent=gene-NLI98_RS21915;Dbxref=Genbank:WP_004146077.1;Name=WP_004146077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224947.1;locus_tag=NLI98_RS21915;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_004146077.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4526547 4527419 . - . ID=gene-NLI98_RS21920;Name=NLI98_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21920;old_locus_tag=NLI98_21915 NZ_CP100601.1 Protein Homology CDS 4526547 4527419 . - 0 ID=cds-WP_021467402.1;Parent=gene-NLI98_RS21920;Dbxref=Genbank:WP_021467402.1;Name=WP_021467402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224946.1;locus_tag=NLI98_RS21920;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_021467402.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4527429 4528916 . - . ID=gene-NLI98_RS21925;Name=NLI98_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21925;old_locus_tag=NLI98_21920 NZ_CP100601.1 Protein Homology CDS 4527429 4528916 . - 0 ID=cds-WP_004182852.1;Parent=gene-NLI98_RS21925;Dbxref=Genbank:WP_004182852.1;Name=WP_004182852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224945.1;locus_tag=NLI98_RS21925;product=sodium:solute symporter family protein;protein_id=WP_004182852.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4529102 4529494 . - . ID=gene-NLI98_RS21930;Name=NLI98_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21930;old_locus_tag=NLI98_21925 NZ_CP100601.1 Protein Homology CDS 4529102 4529494 . - 0 ID=cds-WP_002887555.1;Parent=gene-NLI98_RS21930;Dbxref=Genbank:WP_002887555.1;Name=WP_002887555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224944.1;locus_tag=NLI98_RS21930;product=RidA family protein;protein_id=WP_002887555.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4529505 4530944 . - . ID=gene-NLI98_RS21935;Name=NLI98_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21935;old_locus_tag=NLI98_21930 NZ_CP100601.1 Protein Homology CDS 4529505 4530944 . - 0 ID=cds-WP_088497942.1;Parent=gene-NLI98_RS21935;Dbxref=Genbank:WP_088497942.1;Name=WP_088497942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224943.1;locus_tag=NLI98_RS21935;product=D-aminoacylase;protein_id=WP_088497942.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4530922 4531101 . + . ID=gene-NLI98_RS21940;Name=NLI98_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21940;old_locus_tag=NLI98_21935 NZ_CP100601.1 Protein Homology CDS 4530922 4531101 . + 0 ID=cds-WP_088497941.1;Parent=gene-NLI98_RS21940;Dbxref=Genbank:WP_088497941.1;Name=WP_088497941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224942.1;locus_tag=NLI98_RS21940;product=hypothetical protein;protein_id=WP_088497941.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4531145 4532365 . + . ID=gene-NLI98_RS21945;Name=NLI98_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21945;old_locus_tag=NLI98_21940 NZ_CP100601.1 Protein Homology CDS 4531145 4532365 . + 0 ID=cds-WP_088497940.1;Parent=gene-NLI98_RS21945;Dbxref=Genbank:WP_088497940.1;Name=WP_088497940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224941.1;locus_tag=NLI98_RS21945;product=amino acid deaminase;protein_id=WP_088497940.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4532395 4533411 . - . ID=gene-NLI98_RS21950;Name=NLI98_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21950;old_locus_tag=NLI98_21945 NZ_CP100601.1 Protein Homology CDS 4532395 4533411 . - 0 ID=cds-WP_004146935.1;Parent=gene-NLI98_RS21950;Dbxref=Genbank:WP_004146935.1;Name=WP_004146935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224940.1;locus_tag=NLI98_RS21950;product=Ldh family oxidoreductase;protein_id=WP_004146935.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4533515 4533679 . + . ID=gene-NLI98_RS21955;Name=NLI98_RS21955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21955;old_locus_tag=NLI98_21950 NZ_CP100601.1 GeneMarkS-2+ CDS 4533515 4533679 . + 0 ID=cds-WP_101983589.1;Parent=gene-NLI98_RS21955;Dbxref=Genbank:WP_101983589.1;Name=WP_101983589.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS21955;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=WP_101983589.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 4533622 4533886 . + . ID=gene-NLI98_RS21960;Name=NLI98_RS21960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS21960;old_locus_tag=NLI98_21955;partial=true;pseudo=true;start_range=.,4533622 NZ_CP100601.1 Protein Homology CDS 4533622 4533886 . + 0 ID=cds-NLI98_RS21960;Parent=gene-NLI98_RS21960;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004211353.1;locus_tag=NLI98_RS21960;partial=true;product=FAD/NAD(P)-binding oxidoreductase;pseudo=true;start_range=.,4533622;transl_table=11 NZ_CP100601.1 RefSeq gene 4533890 4534330 . - . ID=gene-NLI98_RS21965;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=NLI98_RS21965;old_locus_tag=NLI98_21960 NZ_CP100601.1 Protein Homology CDS 4533890 4534330 . - 0 ID=cds-WP_002887503.1;Parent=gene-NLI98_RS21965;Dbxref=Genbank:WP_002887503.1;Name=WP_002887503.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224937.1;locus_tag=NLI98_RS21965;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_002887503.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 4534395 4534559 . + . ID=gene-NLI98_RS21970;Name=NLI98_RS21970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS21970;old_locus_tag=NLI98_21965;pseudo=true NZ_CP100601.1 Protein Homology CDS 4534395 4534559 . + 0 ID=cds-NLI98_RS21970;Parent=gene-NLI98_RS21970;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224936.1;locus_tag=NLI98_RS21970;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 4534618 4535250 . + . ID=gene-NLI98_RS21975;Name=NLI98_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21975;old_locus_tag=NLI98_21970 NZ_CP100601.1 Protein Homology CDS 4534618 4535250 . + 0 ID=cds-WP_004894500.1;Parent=gene-NLI98_RS21975;Dbxref=Genbank:WP_004894500.1;Name=WP_004894500.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224935.1;locus_tag=NLI98_RS21975;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_004894500.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4535247 4536011 . + . ID=gene-NLI98_RS21980;Name=NLI98_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21980;old_locus_tag=NLI98_21975 NZ_CP100601.1 Protein Homology CDS 4535247 4536011 . + 0 ID=cds-WP_002887498.1;Parent=gene-NLI98_RS21980;Dbxref=Genbank:WP_002887498.1;Name=WP_002887498.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:TIGR02303.1;locus_tag=NLI98_RS21980;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_002887498.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4536008 4537474 . + . ID=gene-NLI98_RS21985;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=NLI98_RS21985;old_locus_tag=NLI98_21980 NZ_CP100601.1 Protein Homology CDS 4536008 4537474 . + 0 ID=cds-WP_088497939.1;Parent=gene-NLI98_RS21985;Dbxref=Genbank:WP_088497939.1;Name=WP_088497939.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224933.1;locus_tag=NLI98_RS21985;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_088497939.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4537476 4538333 . + . ID=gene-NLI98_RS21990;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=NLI98_RS21990;old_locus_tag=NLI98_21985 NZ_CP100601.1 Protein Homology CDS 4537476 4538333 . + 0 ID=cds-WP_002887492.1;Parent=gene-NLI98_RS21990;Dbxref=Genbank:WP_002887492.1;Name=WP_002887492.1;Ontology_term=GO:0006725,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224932.1;locus_tag=NLI98_RS21990;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_002887492.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4538343 4538723 . + . ID=gene-NLI98_RS21995;Name=NLI98_RS21995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS21995;old_locus_tag=NLI98_21990 NZ_CP100601.1 Protein Homology CDS 4538343 4538723 . + 0 ID=cds-WP_004151392.1;Parent=gene-NLI98_RS21995;Dbxref=Genbank:WP_004151392.1;Name=WP_004151392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224931.1;locus_tag=NLI98_RS21995;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_004151392.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4538832 4539635 . + . ID=gene-NLI98_RS22000;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=NLI98_RS22000;old_locus_tag=NLI98_21995 NZ_CP100601.1 Protein Homology CDS 4538832 4539635 . + 0 ID=cds-WP_002887487.1;Parent=gene-NLI98_RS22000;Dbxref=Genbank:WP_002887487.1;Name=WP_002887487.1;Ontology_term=GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224930.1;locus_tag=NLI98_RS22000;product=2-oxo-hepta-3-ene-1%2C7-dioic acid hydratase;protein_id=WP_002887487.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4539646 4540443 . + . ID=gene-NLI98_RS22005;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=NLI98_RS22005;old_locus_tag=NLI98_22000 NZ_CP100601.1 Protein Homology CDS 4539646 4540443 . + 0 ID=cds-WP_032413340.1;Parent=gene-NLI98_RS22005;Dbxref=Genbank:WP_032413340.1;Name=WP_032413340.1;Ontology_term=GO:0018802;gbkey=CDS;gene=hpaI;go_function=2%2C4-dihydroxyhept-2-ene-1%2C7-dioate aldolase activity|0018802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224929.1;locus_tag=NLI98_RS22005;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_032413340.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4540465 4541823 . + . ID=gene-NLI98_RS22010;Name=hpaX;gbkey=Gene;gene=hpaX;gene_biotype=protein_coding;locus_tag=NLI98_RS22010;old_locus_tag=NLI98_22005 NZ_CP100601.1 Protein Homology CDS 4540465 4541823 . + 0 ID=cds-WP_004211337.1;Parent=gene-NLI98_RS22010;Dbxref=Genbank:WP_004211337.1;Name=WP_004211337.1;Ontology_term=GO:0055085,GO:1900754,GO:1901241;gbkey=CDS;gene=hpaX;go_function=4-hydroxyphenylacetate transmembrane transporter activity|1901241||IEA;go_process=transmembrane transport|0055085||IEA,4-hydroxyphenylacetate transport|1900754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224928.1;locus_tag=NLI98_RS22010;product=4-hydroxyphenylacetate permease;protein_id=WP_004211337.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4541833 4542723 . + . ID=gene-NLI98_RS22015;Name=hpaA;gbkey=Gene;gene=hpaA;gene_biotype=protein_coding;locus_tag=NLI98_RS22015;old_locus_tag=NLI98_22010 NZ_CP100601.1 Protein Homology CDS 4541833 4542723 . + 0 ID=cds-WP_004192167.1;Parent=gene-NLI98_RS22015;Dbxref=Genbank:WP_004192167.1;Name=WP_004192167.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=hpaA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224927.1;locus_tag=NLI98_RS22015;product=4-hydroxyphenylacetate catabolism regulatory protein HpaA;protein_id=WP_004192167.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4542949 4544511 . + . ID=gene-NLI98_RS22020;Name=hpaB;gbkey=Gene;gene=hpaB;gene_biotype=protein_coding;locus_tag=NLI98_RS22020;old_locus_tag=NLI98_22015 NZ_CP100601.1 Protein Homology CDS 4542949 4544511 . + 0 ID=cds-WP_002887473.1;Parent=gene-NLI98_RS22020;Dbxref=Genbank:WP_002887473.1;Name=WP_002887473.1;gbkey=CDS;gene=hpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801462.1;locus_tag=NLI98_RS22020;product=4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component;protein_id=WP_002887473.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4544531 4545043 . + . ID=gene-NLI98_RS22025;Name=NLI98_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22025;old_locus_tag=NLI98_22020 NZ_CP100601.1 Protein Homology CDS 4544531 4545043 . + 0 ID=cds-WP_002887467.1;Parent=gene-NLI98_RS22025;Dbxref=Genbank:WP_002887467.1;Name=WP_002887467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224925.1;locus_tag=NLI98_RS22025;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=WP_002887467.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4545118 4545828 . - . ID=gene-NLI98_RS22030;Name=NLI98_RS22030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22030;old_locus_tag=NLI98_22025 NZ_CP100601.1 Protein Homology CDS 4545118 4545828 . - 0 ID=cds-WP_002887465.1;Parent=gene-NLI98_RS22030;Dbxref=Genbank:WP_002887465.1;Name=WP_002887465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224924.1;locus_tag=NLI98_RS22030;product=ascBF operon repressor;protein_id=WP_002887465.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4545956 4546579 . - . ID=gene-NLI98_RS22035;Name=NLI98_RS22035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22035;old_locus_tag=NLI98_22030 NZ_CP100601.1 Protein Homology CDS 4545956 4546579 . - 0 ID=cds-WP_009485366.1;Parent=gene-NLI98_RS22035;Dbxref=Genbank:WP_009485366.1;Name=WP_009485366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224923.1;locus_tag=NLI98_RS22035;product=hypothetical protein;protein_id=WP_009485366.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4546964 4549114 . + . ID=gene-NLI98_RS22040;Name=NLI98_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22040;old_locus_tag=NLI98_22035 NZ_CP100601.1 Protein Homology CDS 4546964 4549114 . + 0 ID=cds-WP_002887454.1;Parent=gene-NLI98_RS22040;Dbxref=Genbank:WP_002887454.1;Name=WP_002887454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224922.1;locus_tag=NLI98_RS22040;product=carbon starvation protein;protein_id=WP_002887454.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4549224 4549427 . + . ID=gene-NLI98_RS22045;Name=NLI98_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22045;old_locus_tag=NLI98_22040 NZ_CP100601.1 Protein Homology CDS 4549224 4549427 . + 0 ID=cds-WP_002887451.1;Parent=gene-NLI98_RS22045;Dbxref=Genbank:WP_002887451.1;Name=WP_002887451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224921.1;locus_tag=NLI98_RS22045;product=YbdD/YjiX family protein;protein_id=WP_002887451.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4549439 4550395 . + . ID=gene-NLI98_RS22050;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=NLI98_RS22050;old_locus_tag=NLI98_22045 NZ_CP100601.1 Protein Homology CDS 4549439 4550395 . + 0 ID=cds-WP_002887442.1;Parent=gene-NLI98_RS22050;Dbxref=Genbank:WP_002887442.1;Name=WP_002887442.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224920.1;locus_tag=NLI98_RS22050;product=GTPase;protein_id=WP_002887442.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4550787 4551332 . + . ID=gene-NLI98_RS22055;Name=NLI98_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22055;old_locus_tag=NLI98_22050 NZ_CP100601.1 Protein Homology CDS 4550787 4551332 . + 0 ID=cds-WP_004177540.1;Parent=gene-NLI98_RS22055;Dbxref=Genbank:WP_004177540.1;Name=WP_004177540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224919.1;locus_tag=NLI98_RS22055;product=YfaZ family outer membrane protein;protein_id=WP_004177540.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4551430 4552800 . - . ID=gene-NLI98_RS22060;Name=NLI98_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22060;old_locus_tag=NLI98_22055 NZ_CP100601.1 Protein Homology CDS 4551430 4552800 . - 0 ID=cds-WP_004146105.1;Parent=gene-NLI98_RS22060;Dbxref=Genbank:WP_004146105.1;Name=WP_004146105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224918.1;locus_tag=NLI98_RS22060;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_004146105.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4552959 4553909 . - . ID=gene-NLI98_RS22065;Name=NLI98_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22065;old_locus_tag=NLI98_22060 NZ_CP100601.1 Protein Homology CDS 4552959 4553909 . - 0 ID=cds-WP_065807592.1;Parent=gene-NLI98_RS22065;Dbxref=Genbank:WP_065807592.1;Name=WP_065807592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224917.1;locus_tag=NLI98_RS22065;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_065807592.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4554125 4554940 . + . ID=gene-NLI98_RS22070;Name=NLI98_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22070;old_locus_tag=NLI98_22065 NZ_CP100601.1 Protein Homology CDS 4554125 4554940 . + 0 ID=cds-WP_019705891.1;Parent=gene-NLI98_RS22070;Dbxref=Genbank:WP_019705891.1;Name=WP_019705891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224916.1;locus_tag=NLI98_RS22070;product=AraC family transcriptional regulator;protein_id=WP_019705891.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4554988 4555650 . + . ID=gene-NLI98_RS22075;Name=NLI98_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22075;old_locus_tag=NLI98_22070 NZ_CP100601.1 Protein Homology CDS 4554988 4555650 . + 0 ID=cds-WP_019705892.1;Parent=gene-NLI98_RS22075;Dbxref=Genbank:WP_019705892.1;Name=WP_019705892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224915.1;locus_tag=NLI98_RS22075;product=LysE family translocator;protein_id=WP_019705892.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4555643 4556935 . + . ID=gene-NLI98_RS22080;Name=NLI98_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22080;old_locus_tag=NLI98_22075 NZ_CP100601.1 Protein Homology CDS 4555643 4556935 . + 0 ID=cds-WP_004146918.1;Parent=gene-NLI98_RS22080;Dbxref=Genbank:WP_004146918.1;Name=WP_004146918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224914.1;locus_tag=NLI98_RS22080;product=DUF445 domain-containing protein;protein_id=WP_004146918.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4556989 4558230 . + . ID=gene-NLI98_RS22085;Name=mdtM;gbkey=Gene;gene=mdtM;gene_biotype=protein_coding;locus_tag=NLI98_RS22085;old_locus_tag=NLI98_22080 NZ_CP100601.1 Protein Homology CDS 4556989 4558230 . + 0 ID=cds-WP_019705893.1;Parent=gene-NLI98_RS22085;Dbxref=Genbank:WP_019705893.1;Name=WP_019705893.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtM;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224913.1;locus_tag=NLI98_RS22085;product=multidrug efflux MFS transporter MdtM;protein_id=WP_019705893.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4558256 4558495 . + . ID=gene-NLI98_RS22090;Name=NLI98_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22090;old_locus_tag=NLI98_22085 NZ_CP100601.1 Protein Homology CDS 4558256 4558495 . + 0 ID=cds-WP_002887416.1;Parent=gene-NLI98_RS22090;Dbxref=Genbank:WP_002887416.1;Name=WP_002887416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224912.1;locus_tag=NLI98_RS22090;product=DUF2164 domain-containing protein;protein_id=WP_002887416.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4558593 4559744 . + . ID=gene-NLI98_RS22095;Name=NLI98_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22095;old_locus_tag=NLI98_22090 NZ_CP100601.1 Protein Homology CDS 4558593 4559744 . + 0 ID=cds-WP_002887414.1;Parent=gene-NLI98_RS22095;Dbxref=Genbank:WP_002887414.1;Name=WP_002887414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224911.1;locus_tag=NLI98_RS22095;product=double-cubane-cluster-containing anaerobic reductase;protein_id=WP_002887414.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4559754 4560521 . + . ID=gene-NLI98_RS22100;Name=yjiL;gbkey=Gene;gene=yjiL;gene_biotype=protein_coding;locus_tag=NLI98_RS22100;old_locus_tag=NLI98_22095 NZ_CP100601.1 Protein Homology CDS 4559754 4560521 . + 0 ID=cds-WP_002887413.1;Parent=gene-NLI98_RS22100;Dbxref=Genbank:WP_002887413.1;Name=WP_002887413.1;Note=YjiL%2C as found in Escherichia coli%2C is a homolog of the activator ATPases of enzymes such as lactoyl-CoA dehydratase%2C (R)-phenyllactate dehydratase%2C and 2-hydroxyisocaproyl-CoA dehydratase. The typical substrate of those enzymes is acyl-CoA with an OH at the beta-position. YjiL is the putative activator for the cognate protein YjiM%2C a putative 2-hydroxyacyl-CoA dehydratase with unknown specificity%2C encoded by the adjacent gene.;gbkey=CDS;gene=yjiL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224910.1;locus_tag=NLI98_RS22100;product=putative 2-hydroxyacyl-CoA dehydratase activator YjiL;protein_id=WP_002887413.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4560518 4560772 . + . ID=gene-NLI98_RS22105;Name=NLI98_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22105;old_locus_tag=NLI98_22100 NZ_CP100601.1 Protein Homology CDS 4560518 4560772 . + 0 ID=cds-WP_002887412.1;Parent=gene-NLI98_RS22105;Dbxref=Genbank:WP_002887412.1;Name=WP_002887412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224909.1;locus_tag=NLI98_RS22105;product=DUF3343 domain-containing protein;protein_id=WP_002887412.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4560769 4561833 . - . ID=gene-NLI98_RS22110;Name=NLI98_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22110;old_locus_tag=NLI98_22105 NZ_CP100601.1 Protein Homology CDS 4560769 4561833 . - 0 ID=cds-WP_002887411.1;Parent=gene-NLI98_RS22110;Dbxref=Genbank:WP_002887411.1;Name=WP_002887411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224908.1;locus_tag=NLI98_RS22110;product=DUF2955 domain-containing protein;protein_id=WP_002887411.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4561823 4562890 . - . ID=gene-NLI98_RS22115;Name=NLI98_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22115;old_locus_tag=NLI98_22110 NZ_CP100601.1 Protein Homology CDS 4561823 4562890 . - 0 ID=cds-WP_002887394.1;Parent=gene-NLI98_RS22115;Dbxref=Genbank:WP_002887394.1;Name=WP_002887394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224907.1;locus_tag=NLI98_RS22115;product=HlyD family secretion protein;protein_id=WP_002887394.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4562897 4563361 . - . ID=gene-NLI98_RS22120;Name=NLI98_RS22120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22120;old_locus_tag=NLI98_22115 NZ_CP100601.1 Protein Homology CDS 4562897 4563361 . - 0 ID=cds-WP_004177547.1;Parent=gene-NLI98_RS22120;Dbxref=Genbank:WP_004177547.1;Name=WP_004177547.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224906.1;locus_tag=NLI98_RS22120;product=MarR family transcriptional regulator;protein_id=WP_004177547.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4563526 4563690 . - . ID=gene-NLI98_RS22125;Name=NLI98_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22125;old_locus_tag=NLI98_22120 NZ_CP100601.1 Protein Homology CDS 4563526 4563690 . - 0 ID=cds-WP_002887388.1;Parent=gene-NLI98_RS22125;Dbxref=Genbank:WP_002887388.1;Name=WP_002887388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224905.1;locus_tag=NLI98_RS22125;product=DUF1127 domain-containing protein;protein_id=WP_002887388.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4563868 4565280 . + . ID=gene-NLI98_RS22130;Name=NLI98_RS22130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22130;old_locus_tag=NLI98_22125 NZ_CP100601.1 Protein Homology CDS 4563868 4565280 . + 0 ID=cds-WP_065807593.1;Parent=gene-NLI98_RS22130;Dbxref=Genbank:WP_065807593.1;Name=WP_065807593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224904.1;locus_tag=NLI98_RS22130;product=PLP-dependent aminotransferase family protein;protein_id=WP_065807593.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4565586 4567436 . + . ID=gene-NLI98_RS22135;Name=NLI98_RS22135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22135;old_locus_tag=NLI98_22130 NZ_CP100601.1 Protein Homology CDS 4565586 4567436 . + 0 ID=cds-WP_025368479.1;Parent=gene-NLI98_RS22135;Dbxref=Genbank:WP_025368479.1;Name=WP_025368479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004204147.1;locus_tag=NLI98_RS22135;product=AAA family ATPase;protein_id=WP_025368479.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4567447 4567866 . - . ID=gene-NLI98_RS22140;Name=fosA;gbkey=Gene;gene=fosA;gene_biotype=protein_coding;locus_tag=NLI98_RS22140;old_locus_tag=NLI98_22135 NZ_CP100601.1 Protein Homology CDS 4567447 4567866 . - 0 ID=cds-WP_088497937.1;Parent=gene-NLI98_RS22140;Dbxref=Genbank:WP_088497937.1;Name=WP_088497937.1;gbkey=CDS;gene=fosA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012579083.1;locus_tag=NLI98_RS22140;product=FosA5 family fosfomycin resistance glutathione transferase;protein_id=WP_088497937.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4567860 4568768 . - . ID=gene-NLI98_RS22145;Name=NLI98_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22145;old_locus_tag=NLI98_22140 NZ_CP100601.1 Protein Homology CDS 4567860 4568768 . - 0 ID=cds-WP_088497936.1;Parent=gene-NLI98_RS22145;Dbxref=Genbank:WP_088497936.1;Name=WP_088497936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224902.1;locus_tag=NLI98_RS22145;product=LysR family transcriptional regulator;protein_id=WP_088497936.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4568855 4569637 . + . ID=gene-NLI98_RS22150;Name=NLI98_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22150;old_locus_tag=NLI98_22145 NZ_CP100601.1 Protein Homology CDS 4568855 4569637 . + 0 ID=cds-WP_057222170.1;Parent=gene-NLI98_RS22150;Dbxref=Genbank:WP_057222170.1;Name=WP_057222170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224901.1;locus_tag=NLI98_RS22150;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_057222170.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4569674 4570630 . - . ID=gene-NLI98_RS22155;Name=NLI98_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22155;old_locus_tag=NLI98_22150 NZ_CP100601.1 Protein Homology CDS 4569674 4570630 . - 0 ID=cds-WP_088497935.1;Parent=gene-NLI98_RS22155;Dbxref=Genbank:WP_088497935.1;Name=WP_088497935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224900.1;locus_tag=NLI98_RS22155;product=ABC transporter permease;protein_id=WP_088497935.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4570627 4571598 . - . ID=gene-NLI98_RS22160;Name=NLI98_RS22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22160;old_locus_tag=NLI98_22155 NZ_CP100601.1 Protein Homology CDS 4570627 4571598 . - 0 ID=cds-WP_002887351.1;Parent=gene-NLI98_RS22160;Dbxref=Genbank:WP_002887351.1;Name=WP_002887351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224899.1;locus_tag=NLI98_RS22160;product=ABC transporter permease;protein_id=WP_002887351.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4571591 4573075 . - . ID=gene-NLI98_RS22165;Name=NLI98_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22165;old_locus_tag=NLI98_22160 NZ_CP100601.1 Protein Homology CDS 4571591 4573075 . - 0 ID=cds-WP_088497934.1;Parent=gene-NLI98_RS22165;Dbxref=Genbank:WP_088497934.1;Name=WP_088497934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224898.1;locus_tag=NLI98_RS22165;product=sugar ABC transporter ATP-binding protein;protein_id=WP_088497934.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4573126 4574109 . - . ID=gene-NLI98_RS22170;Name=NLI98_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22170;old_locus_tag=NLI98_22165 NZ_CP100601.1 Protein Homology CDS 4573126 4574109 . - 0 ID=cds-WP_002887349.1;Parent=gene-NLI98_RS22170;Dbxref=Genbank:WP_002887349.1;Name=WP_002887349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224897.1;locus_tag=NLI98_RS22170;product=autoinducer 2 ABC transporter substrate-binding protein;protein_id=WP_002887349.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4574614 4575621 . + . ID=gene-NLI98_RS22175;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=NLI98_RS22175;old_locus_tag=NLI98_22170 NZ_CP100601.1 Protein Homology CDS 4574614 4575621 . + 0 ID=cds-WP_088497933.1;Parent=gene-NLI98_RS22175;Dbxref=Genbank:WP_088497933.1;Name=WP_088497933.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224896.1;locus_tag=NLI98_RS22175;product=tryptophan--tRNA ligase;protein_id=WP_088497933.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4575928 4576995 . + . ID=gene-NLI98_RS22180;Name=NLI98_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22180;old_locus_tag=NLI98_22175 NZ_CP100601.1 Protein Homology CDS 4575928 4576995 . + 0 ID=cds-WP_004152412.1;Parent=gene-NLI98_RS22180;Dbxref=Genbank:WP_004152412.1;Name=WP_004152412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224895.1;locus_tag=NLI98_RS22180;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_004152412.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4576992 4579736 . + . ID=gene-NLI98_RS22185;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=NLI98_RS22185;old_locus_tag=NLI98_22180 NZ_CP100601.1 Protein Homology CDS 4576992 4579736 . + 0 ID=cds-WP_040226606.1;Parent=gene-NLI98_RS22185;Dbxref=Genbank:WP_040226606.1;Name=WP_040226606.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224894.1;locus_tag=NLI98_RS22185;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_040226606.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4579736 4580860 . + . ID=gene-NLI98_RS22190;Name=NLI98_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22190;old_locus_tag=NLI98_22185 NZ_CP100601.1 Protein Homology CDS 4579736 4580860 . + 0 ID=cds-WP_038432167.1;Parent=gene-NLI98_RS22190;Dbxref=Genbank:WP_038432167.1;Name=WP_038432167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224893.1;locus_tag=NLI98_RS22190;product=ABC transporter permease;protein_id=WP_038432167.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4580901 4581218 . - . ID=gene-NLI98_RS22195;Name=NLI98_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22195;old_locus_tag=NLI98_22190 NZ_CP100601.1 Protein Homology CDS 4580901 4581218 . - 0 ID=cds-WP_002887322.1;Parent=gene-NLI98_RS22195;Dbxref=Genbank:WP_002887322.1;Name=WP_002887322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224892.1;locus_tag=NLI98_RS22195;product=hypothetical protein;protein_id=WP_002887322.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4581823 4581938 . - . ID=gene-NLI98_RS22200;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NLI98_RS22200;old_locus_tag=NLI98_22195 NZ_CP100601.1 cmsearch rRNA 4581823 4581938 . - . ID=rna-NLI98_RS22200;Parent=gene-NLI98_RS22200;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS22200;product=5S ribosomal RNA NZ_CP100601.1 cmsearch exon 4581823 4581938 . - . ID=exon-NLI98_RS22200-1;Parent=rna-NLI98_RS22200;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS22200;product=5S ribosomal RNA NZ_CP100601.1 RefSeq gene 4582134 4585035 . - . ID=gene-NLI98_RS22205;Name=NLI98_RS22205;gbkey=Gene;gene_biotype=rRNA;locus_tag=NLI98_RS22205;old_locus_tag=NLI98_22200 NZ_CP100601.1 cmsearch rRNA 4582134 4585035 . - . ID=rna-NLI98_RS22205;Parent=gene-NLI98_RS22205;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS22205;product=23S ribosomal RNA NZ_CP100601.1 cmsearch exon 4582134 4585035 . - . ID=exon-NLI98_RS22205-1;Parent=rna-NLI98_RS22205;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS22205;product=23S ribosomal RNA NZ_CP100601.1 RefSeq gene 4585218 4585293 . - . ID=gene-NLI98_RS22210;Name=NLI98_RS22210;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS22210;old_locus_tag=NLI98_22205 NZ_CP100601.1 tRNAscan-SE tRNA 4585218 4585293 . - . ID=rna-NLI98_RS22210;Parent=gene-NLI98_RS22210;anticodon=(pos:complement(4585257..4585259));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS22210;product=tRNA-Glu NZ_CP100601.1 tRNAscan-SE exon 4585218 4585293 . - . ID=exon-NLI98_RS22210-1;Parent=rna-NLI98_RS22210;anticodon=(pos:complement(4585257..4585259));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS22210;product=tRNA-Glu NZ_CP100601.1 RefSeq gene 4585379 4586918 . - . ID=gene-NLI98_RS22215;Name=NLI98_RS22215;gbkey=Gene;gene_biotype=rRNA;locus_tag=NLI98_RS22215;old_locus_tag=NLI98_22210 NZ_CP100601.1 cmsearch rRNA 4585379 4586918 . - . ID=rna-NLI98_RS22215;Parent=gene-NLI98_RS22215;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS22215;product=16S ribosomal RNA NZ_CP100601.1 cmsearch exon 4585379 4586918 . - . ID=exon-NLI98_RS22215-1;Parent=rna-NLI98_RS22215;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS22215;product=16S ribosomal RNA NZ_CP100601.1 RefSeq gene 4587510 4588631 . + . ID=gene-NLI98_RS22220;Name=NLI98_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22220;old_locus_tag=NLI98_22215 NZ_CP100601.1 Protein Homology CDS 4587510 4588631 . + 0 ID=cds-WP_065807264.1;Parent=gene-NLI98_RS22220;Dbxref=Genbank:WP_065807264.1;Name=WP_065807264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224890.1;locus_tag=NLI98_RS22220;product=cupin domain-containing protein;protein_id=WP_065807264.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4588679 4589212 . - . ID=gene-NLI98_RS22225;Name=kacT;gbkey=Gene;gene=kacT;gene_biotype=protein_coding;locus_tag=NLI98_RS22225;old_locus_tag=NLI98_22220 NZ_CP100601.1 Protein Homology CDS 4588679 4589212 . - 0 ID=cds-WP_004178461.1;Parent=gene-NLI98_RS22225;Dbxref=Genbank:WP_004178461.1;Name=WP_004178461.1;gbkey=CDS;gene=kacT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224889.1;locus_tag=NLI98_RS22225;product=type II toxin-antitoxin system toxin KacT;protein_id=WP_004178461.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4589223 4589489 . - . ID=gene-NLI98_RS22230;Name=kacA;gbkey=Gene;gene=kacA;gene_biotype=protein_coding;locus_tag=NLI98_RS22230;old_locus_tag=NLI98_22225 NZ_CP100601.1 Protein Homology CDS 4589223 4589489 . - 0 ID=cds-WP_002887278.1;Parent=gene-NLI98_RS22230;Dbxref=Genbank:WP_002887278.1;Name=WP_002887278.1;gbkey=CDS;gene=kacA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224888.1;locus_tag=NLI98_RS22230;product=type II toxin-antitoxin system antitoxin KacA;protein_id=WP_002887278.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4589592 4591025 . - . ID=gene-NLI98_RS22235;Name=NLI98_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22235;old_locus_tag=NLI98_22230 NZ_CP100601.1 Protein Homology CDS 4589592 4591025 . - 0 ID=cds-WP_016946714.1;Parent=gene-NLI98_RS22235;Dbxref=Genbank:WP_016946714.1;Name=WP_016946714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224887.1;locus_tag=NLI98_RS22235;product=Cu(+)/Ag(+) sensor histidine kinase;protein_id=WP_016946714.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4591015 4591698 . - . ID=gene-NLI98_RS22240;Name=cusR;gbkey=Gene;gene=cusR;gene_biotype=protein_coding;locus_tag=NLI98_RS22240;old_locus_tag=NLI98_22235 NZ_CP100601.1 Protein Homology CDS 4591015 4591698 . - 0 ID=cds-WP_065807266.1;Parent=gene-NLI98_RS22240;Dbxref=Genbank:WP_065807266.1;Name=WP_065807266.1;gbkey=CDS;gene=cusR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224886.1;locus_tag=NLI98_RS22240;product=copper response regulator transcription factor CusR;protein_id=WP_065807266.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4591870 4593255 . + . ID=gene-NLI98_RS22245;Name=NLI98_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22245;old_locus_tag=NLI98_22240 NZ_CP100601.1 Protein Homology CDS 4591870 4593255 . + 0 ID=cds-WP_004177562.1;Parent=gene-NLI98_RS22245;Dbxref=Genbank:WP_004177562.1;Name=WP_004177562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224884.1;locus_tag=NLI98_RS22245;product=efflux transporter outer membrane subunit;protein_id=WP_004177562.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4593273 4593617 . + . ID=gene-NLI98_RS22250;Name=cusF;gbkey=Gene;gene=cusF;gene_biotype=protein_coding;locus_tag=NLI98_RS22250;old_locus_tag=NLI98_22245 NZ_CP100601.1 Protein Homology CDS 4593273 4593617 . + 0 ID=cds-WP_088498161.1;Parent=gene-NLI98_RS22250;Dbxref=Genbank:WP_088498161.1;Name=WP_088498161.1;gbkey=CDS;gene=cusF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900885.1;locus_tag=NLI98_RS22250;product=cation efflux system protein CusF;protein_id=WP_088498161.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4593662 4594924 . + . ID=gene-NLI98_RS22255;Name=NLI98_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22255;old_locus_tag=NLI98_22250 NZ_CP100601.1 Protein Homology CDS 4593662 4594924 . + 0 ID=cds-WP_065807270.1;Parent=gene-NLI98_RS22255;Dbxref=Genbank:WP_065807270.1;Name=WP_065807270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224882.1;locus_tag=NLI98_RS22255;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_065807270.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4594936 4598085 . + . ID=gene-NLI98_RS22260;Name=NLI98_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22260;old_locus_tag=NLI98_22255 NZ_CP100601.1 Protein Homology CDS 4594936 4598085 . + 0 ID=cds-WP_088498160.1;Parent=gene-NLI98_RS22260;Dbxref=Genbank:WP_088498160.1;Name=WP_088498160.1;Ontology_term=GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224881.1;locus_tag=NLI98_RS22260;product=CusA/CzcA family heavy metal efflux RND transporter;protein_id=WP_088498160.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4598158 4598505 . + . ID=gene-NLI98_RS22265;Name=NLI98_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22265;old_locus_tag=NLI98_22260 NZ_CP100601.1 Protein Homology CDS 4598158 4598505 . + 0 ID=cds-WP_004177568.1;Parent=gene-NLI98_RS22265;Dbxref=Genbank:WP_004177568.1;Name=WP_004177568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224880.1;locus_tag=NLI98_RS22265;product=DUF1294 domain-containing protein;protein_id=WP_004177568.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4598515 4599048 . - . ID=gene-NLI98_RS22270;Name=NLI98_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22270;old_locus_tag=NLI98_22265 NZ_CP100601.1 Protein Homology CDS 4598515 4599048 . - 0 ID=cds-WP_088498159.1;Parent=gene-NLI98_RS22270;Dbxref=Genbank:WP_088498159.1;Name=WP_088498159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224879.1;locus_tag=NLI98_RS22270;product=lipocalin family protein;protein_id=WP_088498159.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4599165 4599893 . + . ID=gene-NLI98_RS22275;Name=NLI98_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22275;old_locus_tag=NLI98_22270 NZ_CP100601.1 Protein Homology CDS 4599165 4599893 . + 0 ID=cds-WP_002887258.1;Parent=gene-NLI98_RS22275;Dbxref=Genbank:WP_002887258.1;Name=WP_002887258.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224878.1;locus_tag=NLI98_RS22275;product=MerR family transcriptional regulator;protein_id=WP_002887258.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4600125 4600559 . + . ID=gene-NLI98_RS22280;Name=NLI98_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22280;old_locus_tag=NLI98_22275 NZ_CP100601.1 Protein Homology CDS 4600125 4600559 . + 0 ID=cds-WP_002887256.1;Parent=gene-NLI98_RS22280;Dbxref=Genbank:WP_002887256.1;Name=WP_002887256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224877.1;locus_tag=NLI98_RS22280;product=nuclear transport factor 2 family protein;protein_id=WP_002887256.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4600556 4601275 . + . ID=gene-NLI98_RS22285;Name=NLI98_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22285;old_locus_tag=NLI98_22280 NZ_CP100601.1 Protein Homology CDS 4600556 4601275 . + 0 ID=cds-WP_004152218.1;Parent=gene-NLI98_RS22285;Dbxref=Genbank:WP_004152218.1;Name=WP_004152218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224876.1;locus_tag=NLI98_RS22285;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_004152218.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4601272 4602531 . + . ID=gene-NLI98_RS22290;Name=NLI98_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22290;old_locus_tag=NLI98_22285 NZ_CP100601.1 Protein Homology CDS 4601272 4602531 . + 0 ID=cds-WP_024623212.1;Parent=gene-NLI98_RS22290;Dbxref=Genbank:WP_024623212.1;Name=WP_024623212.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016160203.1;locus_tag=NLI98_RS22290;product=FAD-dependent oxidoreductase;protein_id=WP_024623212.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4602533 4603255 . + . ID=gene-NLI98_RS22295;Name=NLI98_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22295;old_locus_tag=NLI98_22290 NZ_CP100601.1 Protein Homology CDS 4602533 4603255 . + 0 ID=cds-WP_021462629.1;Parent=gene-NLI98_RS22295;Dbxref=Genbank:WP_021462629.1;Name=WP_021462629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224874.1;locus_tag=NLI98_RS22295;product=DUF1365 domain-containing protein;protein_id=WP_021462629.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4603252 4604472 . + . ID=gene-NLI98_RS22300;Name=NLI98_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22300;old_locus_tag=NLI98_22295 NZ_CP100601.1 Protein Homology CDS 4603252 4604472 . + 0 ID=cds-WP_088498158.1;Parent=gene-NLI98_RS22300;Dbxref=Genbank:WP_088498158.1;Name=WP_088498158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224873.1;locus_tag=NLI98_RS22300;product=cyclopropane-fatty-acyl-phospholipid synthase family protein;protein_id=WP_088498158.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4604469 4604954 . + . ID=gene-NLI98_RS22305;Name=NLI98_RS22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22305;old_locus_tag=NLI98_22300 NZ_CP100601.1 Protein Homology CDS 4604469 4604954 . + 0 ID=cds-WP_004178441.1;Parent=gene-NLI98_RS22305;Dbxref=Genbank:WP_004178441.1;Name=WP_004178441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224872.1;locus_tag=NLI98_RS22305;product=DUF2878 domain-containing protein;protein_id=WP_004178441.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4604951 4605475 . + . ID=gene-NLI98_RS22310;Name=NLI98_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22310;old_locus_tag=NLI98_22305 NZ_CP100601.1 Protein Homology CDS 4604951 4605475 . + 0 ID=cds-WP_088498157.1;Parent=gene-NLI98_RS22310;Dbxref=Genbank:WP_088498157.1;Name=WP_088498157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224871.1;locus_tag=NLI98_RS22310;product=hypothetical protein;protein_id=WP_088498157.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4605472 4606023 . + . ID=gene-NLI98_RS22315;Name=NLI98_RS22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22315;old_locus_tag=NLI98_22310 NZ_CP100601.1 Protein Homology CDS 4605472 4606023 . + 0 ID=cds-WP_004177586.1;Parent=gene-NLI98_RS22315;Dbxref=Genbank:WP_004177586.1;Name=WP_004177586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224870.1;locus_tag=NLI98_RS22315;product=DUF3833 domain-containing protein;protein_id=WP_004177586.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4606020 4606979 . + . ID=gene-NLI98_RS22320;Name=NLI98_RS22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22320;old_locus_tag=NLI98_22315 NZ_CP100601.1 Protein Homology CDS 4606020 4606979 . + 0 ID=cds-WP_004178436.1;Parent=gene-NLI98_RS22320;Dbxref=Genbank:WP_004178436.1;Name=WP_004178436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959355.1;locus_tag=NLI98_RS22320;product=DUF523 and DUF1722 domain-containing protein;protein_id=WP_004178436.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4607282 4608664 . - . ID=gene-NLI98_RS22325;Name=NLI98_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22325;old_locus_tag=NLI98_22320 NZ_CP100601.1 Protein Homology CDS 4607282 4608664 . - 0 ID=cds-WP_023316370.1;Parent=gene-NLI98_RS22325;Dbxref=Genbank:WP_023316370.1;Name=WP_023316370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224868.1;locus_tag=NLI98_RS22325;product=carbohydrate porin;protein_id=WP_023316370.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4608936 4610255 . - . ID=gene-NLI98_RS22330;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=NLI98_RS22330;old_locus_tag=NLI98_22325 NZ_CP100601.1 Protein Homology CDS 4608936 4610255 . - 0 ID=cds-WP_088498155.1;Parent=gene-NLI98_RS22330;Dbxref=Genbank:WP_088498155.1;Name=WP_088498155.1;Ontology_term=GO:0006098,GO:0042732,GO:0000287,GO:0009045;gbkey=CDS;gene=xylA;go_function=magnesium ion binding|0000287||IEA,xylose isomerase activity|0009045||IEA;go_process=pentose-phosphate shunt|0006098||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224866.1;locus_tag=NLI98_RS22330;product=xylose isomerase;protein_id=WP_088498155.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4610682 4612121 . + . ID=gene-NLI98_RS22335;Name=NLI98_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22335;old_locus_tag=NLI98_22330 NZ_CP100601.1 Protein Homology CDS 4610682 4612121 . + 0 ID=cds-WP_004153321.1;Parent=gene-NLI98_RS22335;Dbxref=Genbank:WP_004153321.1;Name=WP_004153321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224865.1;locus_tag=NLI98_RS22335;product=MFS transporter;protein_id=WP_004153321.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4612180 4613859 . + . ID=gene-NLI98_RS22340;Name=NLI98_RS22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22340;old_locus_tag=NLI98_22335 NZ_CP100601.1 Protein Homology CDS 4612180 4613859 . + 0 ID=cds-WP_032420866.1;Parent=gene-NLI98_RS22340;Dbxref=Genbank:WP_032420866.1;Name=WP_032420866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224864.1;locus_tag=NLI98_RS22340;product=glycoside hydrolase family 43 protein;protein_id=WP_032420866.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4613942 4614580 . - . ID=gene-NLI98_RS22345;Name=NLI98_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22345;old_locus_tag=NLI98_22340 NZ_CP100601.1 Protein Homology CDS 4613942 4614580 . - 0 ID=cds-WP_040165561.1;Parent=gene-NLI98_RS22345;Dbxref=Genbank:WP_040165561.1;Name=WP_040165561.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224863.1;locus_tag=NLI98_RS22345;product=HNH endonuclease;protein_id=WP_040165561.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 4614741 4615434 . + . ID=gene-NLI98_RS22350;Name=NLI98_RS22350;end_range=4615434,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS22350;old_locus_tag=NLI98_22345;partial=true;pseudo=true;start_range=.,4614741 NZ_CP100601.1 Protein Homology CDS 4614741 4615434 . + 0 ID=cds-NLI98_RS22350;Parent=gene-NLI98_RS22350;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4615434,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005054087.1;locus_tag=NLI98_RS22350;partial=true;product=transposase;pseudo=true;start_range=.,4614741;transl_table=11 NZ_CP100601.1 RefSeq gene 4615631 4616440 . - . ID=gene-NLI98_RS22355;Name=NLI98_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22355;old_locus_tag=NLI98_22350 NZ_CP100601.1 Protein Homology CDS 4615631 4616440 . - 0 ID=cds-WP_004177598.1;Parent=gene-NLI98_RS22355;Dbxref=Genbank:WP_004177598.1;Name=WP_004177598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178424.1;locus_tag=NLI98_RS22355;product=polysaccharide pyruvyl transferase family protein;protein_id=WP_004177598.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4616538 4618760 . + . ID=gene-NLI98_RS22360;Name=NLI98_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22360;old_locus_tag=NLI98_22355 NZ_CP100601.1 Protein Homology CDS 4616538 4618760 . + 0 ID=cds-WP_004178423.1;Parent=gene-NLI98_RS22360;Dbxref=Genbank:WP_004178423.1;Name=WP_004178423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020804634.1;locus_tag=NLI98_RS22360;product=glycosyltransferase;protein_id=WP_004178423.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 4618912 4620000 . - . ID=gene-NLI98_RS22365;Name=NLI98_RS22365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS22365;old_locus_tag=NLI98_22360;pseudo=true NZ_CP100601.1 Protein Homology CDS 4618912 4620000 . - 0 ID=cds-NLI98_RS22365;Parent=gene-NLI98_RS22365;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611504.1;locus_tag=NLI98_RS22365;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 4620654 4621781 . + . ID=gene-NLI98_RS22370;Name=NLI98_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22370;old_locus_tag=NLI98_22365 NZ_CP100601.1 Protein Homology CDS 4620654 4621781 . + 0 ID=cds-WP_021441102.1;Parent=gene-NLI98_RS22370;Dbxref=Genbank:WP_021441102.1;Name=WP_021441102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146856.1;locus_tag=NLI98_RS22370;product=PAAR domain-containing protein;protein_id=WP_021441102.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4621801 4622034 . + . ID=gene-NLI98_RS22375;Name=NLI98_RS22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22375;old_locus_tag=NLI98_22370 NZ_CP100601.1 Protein Homology CDS 4621801 4622034 . + 0 ID=cds-WP_014908049.1;Parent=gene-NLI98_RS22375;Dbxref=Genbank:WP_014908049.1;Name=WP_014908049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020323740.1;locus_tag=NLI98_RS22375;product=hypothetical protein;protein_id=WP_014908049.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 4622180 4622314 . + . ID=gene-NLI98_RS22380;Name=NLI98_RS22380;end_range=4622314,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS22380;old_locus_tag=NLI98_22375;partial=true;pseudo=true NZ_CP100601.1 Protein Homology CDS 4622180 4622314 . + 0 ID=cds-NLI98_RS22380;Parent=gene-NLI98_RS22380;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=4622314,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611384.1;locus_tag=NLI98_RS22380;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 4622327 4622437 . - . ID=gene-NLI98_RS22385;Name=NLI98_RS22385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS22385;old_locus_tag=NLI98_22380;partial=true;pseudo=true;start_range=.,4622327 NZ_CP100601.1 Protein Homology CDS 4622327 4622437 . - 0 ID=cds-NLI98_RS22385;Parent=gene-NLI98_RS22385;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218945.1;locus_tag=NLI98_RS22385;partial=true;product=DUF4102 domain-containing protein;pseudo=true;start_range=.,4622327;transl_table=11 NZ_CP100601.1 RefSeq gene 4623499 4624341 . - . ID=gene-NLI98_RS22390;Name=NLI98_RS22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22390;old_locus_tag=NLI98_22385 NZ_CP100601.1 GeneMarkS-2+ CDS 4623499 4624341 . - 0 ID=cds-WP_098067400.1;Parent=gene-NLI98_RS22390;Dbxref=Genbank:WP_098067400.1;Name=WP_098067400.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS22390;product=hypothetical protein;protein_id=WP_098067400.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4624344 4625915 . - . ID=gene-NLI98_RS22395;Name=NLI98_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22395;old_locus_tag=NLI98_22390 NZ_CP100601.1 Protein Homology CDS 4624344 4625915 . - 0 ID=cds-WP_088498148.1;Parent=gene-NLI98_RS22395;Dbxref=Genbank:WP_088498148.1;Name=WP_088498148.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024700.2;locus_tag=NLI98_RS22395;product=AAA family ATPase;protein_id=WP_088498148.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4626041 4626280 . - . ID=gene-NLI98_RS22400;Name=NLI98_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22400;old_locus_tag=NLI98_22395 NZ_CP100601.1 GeneMarkS-2+ CDS 4626041 4626280 . - 0 ID=cds-WP_225733977.1;Parent=gene-NLI98_RS22400;Dbxref=Genbank:WP_225733977.1;Name=WP_225733977.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS22400;product=hypothetical protein;protein_id=WP_225733977.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 4626741 4626830 . - . ID=gene-NLI98_RS22405;Name=NLI98_RS22405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS22405;old_locus_tag=NLI98_22400;partial=true;pseudo=true;start_range=.,4626741 NZ_CP100601.1 Protein Homology CDS 4626741 4626830 . - 0 ID=cds-NLI98_RS22405;Parent=gene-NLI98_RS22405;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001094400.1;locus_tag=NLI98_RS22405;partial=true;product=toxin;pseudo=true;start_range=.,4626741;transl_table=11 NZ_CP100601.1 RefSeq gene 4626851 4627192 . - . ID=gene-NLI98_RS22410;Name=NLI98_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22410;old_locus_tag=NLI98_22405 NZ_CP100601.1 Protein Homology CDS 4626851 4627192 . - 0 ID=cds-WP_088498147.1;Parent=gene-NLI98_RS22410;Dbxref=Genbank:WP_088498147.1;Name=WP_088498147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694581.1;locus_tag=NLI98_RS22410;product=type IV toxin-antitoxin system YeeU family antitoxin;protein_id=WP_088498147.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4627203 4627745 . - . ID=gene-NLI98_RS22415;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=NLI98_RS22415;old_locus_tag=NLI98_22410 NZ_CP100601.1 Protein Homology CDS 4627203 4627745 . - 0 ID=cds-WP_088498146.1;Parent=gene-NLI98_RS22415;Dbxref=Genbank:WP_088498146.1;Name=WP_088498146.1;Ontology_term=GO:0006281;gbkey=CDS;gene=radC;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017694582.1;locus_tag=NLI98_RS22415;product=DNA repair protein RadC;protein_id=WP_088498146.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4627758 4628201 . - . ID=gene-NLI98_RS22420;Name=NLI98_RS22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22420;old_locus_tag=NLI98_22415 NZ_CP100601.1 Protein Homology CDS 4627758 4628201 . - 0 ID=cds-WP_088498145.1;Parent=gene-NLI98_RS22420;Dbxref=Genbank:WP_088498145.1;Name=WP_088498145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004128347.1;locus_tag=NLI98_RS22420;product=antirestriction protein;protein_id=WP_088498145.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4628201 4629055 . - . ID=gene-NLI98_RS22425;Name=NLI98_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22425;old_locus_tag=NLI98_22420 NZ_CP100601.1 Protein Homology CDS 4628201 4629055 . - 0 ID=cds-WP_088498144.1;Parent=gene-NLI98_RS22425;Dbxref=Genbank:WP_088498144.1;Name=WP_088498144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020885360.1;locus_tag=NLI98_RS22425;product=DUF945 domain-containing protein;protein_id=WP_088498144.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4629175 4629648 . - . ID=gene-NLI98_RS22430;Name=NLI98_RS22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22430;old_locus_tag=NLI98_22425 NZ_CP100601.1 Protein Homology CDS 4629175 4629648 . - 0 ID=cds-WP_088498143.1;Parent=gene-NLI98_RS22430;Dbxref=Genbank:WP_088498143.1;Name=WP_088498143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543036.1;locus_tag=NLI98_RS22430;product=hypothetical protein;protein_id=WP_088498143.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4629720 4630172 . - . ID=gene-NLI98_RS22435;Name=NLI98_RS22435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22435;old_locus_tag=NLI98_22430 NZ_CP100601.1 Protein Homology CDS 4629720 4630172 . - 0 ID=cds-WP_088498142.1;Parent=gene-NLI98_RS22435;Dbxref=Genbank:WP_088498142.1;Name=WP_088498142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000734322.1;locus_tag=NLI98_RS22435;product=hypothetical protein;protein_id=WP_088498142.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4630208 4630924 . - . ID=gene-NLI98_RS22440;Name=NLI98_RS22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22440;old_locus_tag=NLI98_22435 NZ_CP100601.1 Protein Homology CDS 4630208 4630924 . - 0 ID=cds-WP_088498141.1;Parent=gene-NLI98_RS22440;Dbxref=Genbank:WP_088498141.1;Name=WP_088498141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543038.1;locus_tag=NLI98_RS22440;product=WYL domain-containing protein;protein_id=WP_088498141.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4631168 4632043 . - . ID=gene-NLI98_RS22445;Name=NLI98_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22445;old_locus_tag=NLI98_22440 NZ_CP100601.1 Protein Homology CDS 4631168 4632043 . - 0 ID=cds-WP_088498140.1;Parent=gene-NLI98_RS22445;Dbxref=Genbank:WP_088498140.1;Name=WP_088498140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000165430.1;locus_tag=NLI98_RS22445;product=GTPase family protein;protein_id=WP_088498140.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4632550 4633725 . + . ID=gene-NLI98_RS22450;Name=NLI98_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22450;old_locus_tag=NLI98_22445 NZ_CP100601.1 Protein Homology CDS 4632550 4633725 . + 0 ID=cds-WP_088498153.1;Parent=gene-NLI98_RS22450;Dbxref=Genbank:WP_088498153.1;Name=WP_088498153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000992191.1;locus_tag=NLI98_RS22450;product=SAVED domain-containing protein;protein_id=WP_088498153.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4633722 4634969 . + . ID=gene-NLI98_RS22455;Name=NLI98_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22455;old_locus_tag=NLI98_22450 NZ_CP100601.1 Protein Homology CDS 4633722 4634969 . + 0 ID=cds-WP_088498139.1;Parent=gene-NLI98_RS22455;Dbxref=Genbank:WP_088498139.1;Name=WP_088498139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000064266.1;locus_tag=NLI98_RS22455;product=nucleotidyltransferase;protein_id=WP_088498139.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4634971 4636734 . + . ID=gene-NLI98_RS22460;Name=NLI98_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22460;old_locus_tag=NLI98_22455 NZ_CP100601.1 Protein Homology CDS 4634971 4636734 . + 0 ID=cds-WP_088498152.1;Parent=gene-NLI98_RS22460;Dbxref=Genbank:WP_088498152.1;Name=WP_088498152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014640894.1;locus_tag=NLI98_RS22460;product=ThiF family adenylyltransferase;protein_id=WP_088498152.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4636731 4637228 . + . ID=gene-NLI98_RS22465;Name=NLI98_RS22465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22465;old_locus_tag=NLI98_22460 NZ_CP100601.1 Protein Homology CDS 4636731 4637228 . + 0 ID=cds-WP_088498138.1;Parent=gene-NLI98_RS22465;Dbxref=Genbank:WP_088498138.1;Name=WP_088498138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001002160.1;locus_tag=NLI98_RS22465;product=Mov34/MPN/PAD-1 family protein;protein_id=WP_088498138.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4637242 4637784 . - . ID=gene-NLI98_RS22470;Name=NLI98_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22470;old_locus_tag=NLI98_22465 NZ_CP100601.1 Protein Homology CDS 4637242 4637784 . - 0 ID=cds-WP_088498137.1;Parent=gene-NLI98_RS22470;Dbxref=Genbank:WP_088498137.1;Name=WP_088498137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000994210.1;locus_tag=NLI98_RS22470;product=3'-5' exonuclease;protein_id=WP_088498137.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4638221 4639423 . + . ID=gene-NLI98_RS22475;Name=NLI98_RS22475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22475;old_locus_tag=NLI98_22470 NZ_CP100601.1 Protein Homology CDS 4638221 4639423 . + 0 ID=cds-WP_159195395.1;Parent=gene-NLI98_RS22475;Dbxref=Genbank:WP_159195395.1;Name=WP_159195395.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037255.2;locus_tag=NLI98_RS22475;product=PIN domain-containing protein;protein_id=WP_159195395.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4639447 4640415 . + . ID=gene-NLI98_RS22480;Name=NLI98_RS22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22480;old_locus_tag=NLI98_22475 NZ_CP100601.1 Protein Homology CDS 4639447 4640415 . + 0 ID=cds-WP_197985802.1;Parent=gene-NLI98_RS22480;Dbxref=Genbank:WP_197985802.1;Name=WP_197985802.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017519.2;locus_tag=NLI98_RS22480;product=YiiX/YebB-like N1pC/P60 family cysteine hydrolase;protein_id=WP_197985802.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4640744 4641091 . - . ID=gene-NLI98_RS22485;Name=NLI98_RS22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22485;old_locus_tag=NLI98_22480 NZ_CP100601.1 GeneMarkS-2+ CDS 4640744 4641091 . - 0 ID=cds-WP_225733976.1;Parent=gene-NLI98_RS22485;Dbxref=Genbank:WP_225733976.1;Name=WP_225733976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS22485;product=hypothetical protein;protein_id=WP_225733976.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 4642082 4642567 . - . ID=gene-NLI98_RS22490;Name=NLI98_RS22490;end_range=4642567,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS22490;old_locus_tag=NLI98_22485;partial=true;pseudo=true NZ_CP100601.1 Protein Homology CDS 4642082 4642567 . - 0 ID=cds-NLI98_RS22490;Parent=gene-NLI98_RS22490;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=4642567,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004136916.1;locus_tag=NLI98_RS22490;partial=true;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 4642898 4643806 . + . ID=gene-NLI98_RS22495;Name=NLI98_RS22495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22495;old_locus_tag=NLI98_22490 NZ_CP100601.1 Protein Homology CDS 4642898 4643806 . + 0 ID=cds-WP_088498133.1;Parent=gene-NLI98_RS22495;Dbxref=Genbank:WP_088498133.1;Name=WP_088498133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608818.1;locus_tag=NLI98_RS22495;product=hypothetical protein;protein_id=WP_088498133.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4643808 4644614 . + . ID=gene-NLI98_RS22500;Name=NLI98_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22500;old_locus_tag=NLI98_22495 NZ_CP100601.1 Protein Homology CDS 4643808 4644614 . + 0 ID=cds-WP_088498132.1;Parent=gene-NLI98_RS22500;Dbxref=Genbank:WP_088498132.1;Name=WP_088498132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001608817.1;locus_tag=NLI98_RS22500;product=GIY-YIG nuclease family protein;protein_id=WP_088498132.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4645069 4645866 . - . ID=gene-NLI98_RS22505;Name=NLI98_RS22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22505;old_locus_tag=NLI98_22500 NZ_CP100601.1 Protein Homology CDS 4645069 4645866 . - 0 ID=cds-WP_049033254.1;Parent=gene-NLI98_RS22505;Dbxref=Genbank:WP_049033254.1;Name=WP_049033254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001335904.1;locus_tag=NLI98_RS22505;product=hypothetical protein;protein_id=WP_049033254.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4646244 4646825 . + . ID=gene-NLI98_RS22510;Name=NLI98_RS22510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22510;old_locus_tag=NLI98_22505 NZ_CP100601.1 Protein Homology CDS 4646244 4646825 . + 0 ID=cds-WP_088498131.1;Parent=gene-NLI98_RS22510;Dbxref=Genbank:WP_088498131.1;Name=WP_088498131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017880129.1;locus_tag=NLI98_RS22510;product=inovirus-type Gp2 protein;protein_id=WP_088498131.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 4646929 4647129 . + . ID=gene-NLI98_RS22515;Name=NLI98_RS22515;end_range=4647129,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS22515;old_locus_tag=NLI98_22510;partial=true;pseudo=true NZ_CP100601.1 Protein Homology CDS 4646929 4647129 . + 0 ID=cds-NLI98_RS22515;Parent=gene-NLI98_RS22515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4647129,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456342.1;locus_tag=NLI98_RS22515;partial=true;product=AlpA family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 4647431 4647682 . + . ID=gene-NLI98_RS22520;Name=NLI98_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22520;old_locus_tag=NLI98_22515 NZ_CP100601.1 GeneMarkS-2+ CDS 4647431 4647682 . + 0 ID=cds-WP_225733975.1;Parent=gene-NLI98_RS22520;Dbxref=Genbank:WP_225733975.1;Name=WP_225733975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS22520;product=hypothetical protein;protein_id=WP_225733975.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4647806 4648339 . + . ID=gene-NLI98_RS22525;Name=NLI98_RS22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22525;old_locus_tag=NLI98_22520 NZ_CP100601.1 Protein Homology CDS 4647806 4648339 . + 0 ID=cds-WP_020839065.1;Parent=gene-NLI98_RS22525;Dbxref=Genbank:WP_020839065.1;Name=WP_020839065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001089256.1;locus_tag=NLI98_RS22525;product=hypothetical protein;protein_id=WP_020839065.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4648640 4649143 . + . ID=gene-NLI98_RS22530;Name=NLI98_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22530;old_locus_tag=NLI98_22525 NZ_CP100601.1 Protein Homology CDS 4648640 4649143 . + 0 ID=cds-WP_102024243.1;Parent=gene-NLI98_RS22530;Dbxref=Genbank:WP_102024243.1;Name=WP_102024243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120574.1;locus_tag=NLI98_RS22530;product=putative zinc ribbon protein;protein_id=WP_102024243.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4649358 4652420 . - . ID=gene-NLI98_RS22535;Name=NLI98_RS22535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22535;old_locus_tag=NLI98_22530 NZ_CP100601.1 Protein Homology CDS 4649358 4652420 . - 0 ID=cds-WP_088498129.1;Parent=gene-NLI98_RS22535;Dbxref=Genbank:WP_088498129.1;Name=WP_088498129.1;Ontology_term=GO:0009307,GO:0009035,GO:0019812;gbkey=CDS;go_component=type I site-specific deoxyribonuclease complex|0019812||IEA;go_function=type I site-specific deoxyribonuclease activity|0009035||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014980776.1;locus_tag=NLI98_RS22535;product=HsdR family type I site-specific deoxyribonuclease;protein_id=WP_088498129.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4652433 4653587 . - . ID=gene-NLI98_RS22540;Name=NLI98_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22540;old_locus_tag=NLI98_22535 NZ_CP100601.1 Protein Homology CDS 4652433 4653587 . - 0 ID=cds-WP_151427854.1;Parent=gene-NLI98_RS22540;Dbxref=Genbank:WP_151427854.1;Name=WP_151427854.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=NLI98_RS22540;product=restriction endonuclease subunit S;protein_id=WP_151427854.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4653588 4655078 . - . ID=gene-NLI98_RS22545;Name=NLI98_RS22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22545;old_locus_tag=NLI98_22540 NZ_CP100601.1 Protein Homology CDS 4653588 4655078 . - 0 ID=cds-WP_088498128.1;Parent=gene-NLI98_RS22545;Dbxref=Genbank:WP_088498128.1;Name=WP_088498128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001361369.1;locus_tag=NLI98_RS22545;product=type I restriction-modification system subunit M;protein_id=WP_088498128.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4655084 4656583 . - . ID=gene-NLI98_RS22550;Name=NLI98_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22550;old_locus_tag=NLI98_22545 NZ_CP100601.1 Protein Homology CDS 4655084 4656583 . - 0 ID=cds-WP_088498127.1;Parent=gene-NLI98_RS22550;Dbxref=Genbank:WP_088498127.1;Name=WP_088498127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001965934.1;locus_tag=NLI98_RS22550;product=type I restriction-modification system subunit M;protein_id=WP_088498127.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4656583 4656810 . - . ID=gene-NLI98_RS22555;Name=NLI98_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22555;old_locus_tag=NLI98_22550 NZ_CP100601.1 Protein Homology CDS 4656583 4656810 . - 0 ID=cds-WP_001608810.1;Parent=gene-NLI98_RS22555;Dbxref=Genbank:WP_001608810.1;Name=WP_001608810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001606727.1;locus_tag=NLI98_RS22555;product=helix-turn-helix transcriptional regulator;protein_id=WP_001608810.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4657058 4658317 . - . ID=gene-NLI98_RS22560;Name=NLI98_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22560;old_locus_tag=NLI98_22555 NZ_CP100601.1 Protein Homology CDS 4657058 4658317 . - 0 ID=cds-WP_088498126.1;Parent=gene-NLI98_RS22560;Dbxref=Genbank:WP_088498126.1;Name=WP_088498126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001757853.1;locus_tag=NLI98_RS22560;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_088498126.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4658516 4658600 . - . ID=gene-NLI98_RS22565;Name=NLI98_RS22565;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS22565;old_locus_tag=NLI98_22560 NZ_CP100601.1 tRNAscan-SE tRNA 4658516 4658600 . - . ID=rna-NLI98_RS22565;Parent=gene-NLI98_RS22565;anticodon=(pos:complement(4658564..4658566));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS22565;product=tRNA-Leu NZ_CP100601.1 tRNAscan-SE exon 4658516 4658600 . - . ID=exon-NLI98_RS22565-1;Parent=rna-NLI98_RS22565;anticodon=(pos:complement(4658564..4658566));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS22565;product=tRNA-Leu NZ_CP100601.1 RefSeq gene 4658728 4658859 . - . ID=gene-NLI98_RS22570;Name=NLI98_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22570 NZ_CP100601.1 GeneMarkS-2+ CDS 4658728 4658859 . - 0 ID=cds-WP_255260416.1;Parent=gene-NLI98_RS22570;Dbxref=Genbank:WP_255260416.1;Name=WP_255260416.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS22570;product=hypothetical protein;protein_id=WP_255260416.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4659208 4659888 . + . ID=gene-NLI98_RS22575;Name=NLI98_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22575;old_locus_tag=NLI98_22565 NZ_CP100601.1 Protein Homology CDS 4659208 4659888 . + 0 ID=cds-WP_040172585.1;Parent=gene-NLI98_RS22575;Dbxref=Genbank:WP_040172585.1;Name=WP_040172585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224839.1;locus_tag=NLI98_RS22575;product=carbonic anhydrase;protein_id=WP_040172585.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4659885 4661354 . + . ID=gene-NLI98_RS22580;Name=NLI98_RS22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22580;old_locus_tag=NLI98_22570 NZ_CP100601.1 Protein Homology CDS 4659885 4661354 . + 0 ID=cds-WP_088497954.1;Parent=gene-NLI98_RS22580;Dbxref=Genbank:WP_088497954.1;Name=WP_088497954.1;Ontology_term=GO:0008272,GO:0015116,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224838.1;locus_tag=NLI98_RS22580;product=SulP family inorganic anion transporter;protein_id=WP_088497954.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4661466 4662485 . + . ID=gene-NLI98_RS22585;Name=NLI98_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22585;old_locus_tag=NLI98_22575 NZ_CP100601.1 Protein Homology CDS 4661466 4662485 . + 0 ID=cds-WP_004192328.1;Parent=gene-NLI98_RS22585;Dbxref=Genbank:WP_004192328.1;Name=WP_004192328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224837.1;locus_tag=NLI98_RS22585;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_004192328.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4662616 4663500 . + . ID=gene-NLI98_RS22590;Name=NLI98_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22590;old_locus_tag=NLI98_22580 NZ_CP100601.1 Protein Homology CDS 4662616 4663500 . + 0 ID=cds-WP_004146807.1;Parent=gene-NLI98_RS22590;Dbxref=Genbank:WP_004146807.1;Name=WP_004146807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224836.1;locus_tag=NLI98_RS22590;product=sugar ABC transporter permease;protein_id=WP_004146807.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4663490 4664377 . + . ID=gene-NLI98_RS22595;Name=NLI98_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22595;old_locus_tag=NLI98_22585 NZ_CP100601.1 Protein Homology CDS 4663490 4664377 . + 0 ID=cds-WP_004192333.1;Parent=gene-NLI98_RS22595;Dbxref=Genbank:WP_004192333.1;Name=WP_004192333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224835.1;locus_tag=NLI98_RS22595;product=carbohydrate ABC transporter permease;protein_id=WP_004192333.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4664388 4665212 . + . ID=gene-NLI98_RS22600;Name=NLI98_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22600;old_locus_tag=NLI98_22590 NZ_CP100601.1 Protein Homology CDS 4664388 4665212 . + 0 ID=cds-WP_002886979.1;Parent=gene-NLI98_RS22600;Dbxref=Genbank:WP_002886979.1;Name=WP_002886979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224834.1;locus_tag=NLI98_RS22600;product=phosphodiesterase;protein_id=WP_002886979.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4665218 4666288 . + . ID=gene-NLI98_RS22605;Name=NLI98_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22605;old_locus_tag=NLI98_22595 NZ_CP100601.1 Protein Homology CDS 4665218 4666288 . + 0 ID=cds-WP_040216121.1;Parent=gene-NLI98_RS22605;Dbxref=Genbank:WP_040216121.1;Name=WP_040216121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946339.1;locus_tag=NLI98_RS22605;product=ABC transporter ATP-binding protein;protein_id=WP_040216121.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4666428 4667738 . + . ID=gene-NLI98_RS22610;Name=NLI98_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22610;old_locus_tag=NLI98_22600 NZ_CP100601.1 Protein Homology CDS 4666428 4667738 . + 0 ID=cds-WP_023280790.1;Parent=gene-NLI98_RS22610;Dbxref=Genbank:WP_023280790.1;Name=WP_023280790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224832.1;locus_tag=NLI98_RS22610;product=ABC transporter substrate-binding protein;protein_id=WP_023280790.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4667883 4668782 . - . ID=gene-NLI98_RS22615;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=NLI98_RS22615;old_locus_tag=NLI98_22605 NZ_CP100601.1 Protein Homology CDS 4667883 4668782 . - 0 ID=cds-WP_064163828.1;Parent=gene-NLI98_RS22615;Dbxref=Genbank:WP_064163828.1;Name=WP_064163828.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224831.1;locus_tag=NLI98_RS22615;product=myo-inosose-2 dehydratase;protein_id=WP_064163828.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4668806 4669690 . - . ID=gene-NLI98_RS22620;Name=NLI98_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22620;old_locus_tag=NLI98_22610 NZ_CP100601.1 Protein Homology CDS 4668806 4669690 . - 0 ID=cds-WP_004152193.1;Parent=gene-NLI98_RS22620;Dbxref=Genbank:WP_004152193.1;Name=WP_004152193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224830.1;locus_tag=NLI98_RS22620;product=sugar phosphate isomerase/epimerase;protein_id=WP_004152193.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4669732 4670745 . - . ID=gene-NLI98_RS22625;Name=NLI98_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22625;old_locus_tag=NLI98_22615 NZ_CP100601.1 Protein Homology CDS 4669732 4670745 . - 0 ID=cds-WP_004186740.1;Parent=gene-NLI98_RS22625;Dbxref=Genbank:WP_004186740.1;Name=WP_004186740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224829.1;locus_tag=NLI98_RS22625;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_004186740.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4670792 4672732 . - . ID=gene-NLI98_RS22630;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=NLI98_RS22630;old_locus_tag=NLI98_22620 NZ_CP100601.1 Protein Homology CDS 4670792 4672732 . - 0 ID=cds-WP_004152191.1;Parent=gene-NLI98_RS22630;Dbxref=Genbank:WP_004152191.1;Name=WP_004152191.1;Ontology_term=GO:0019310,GO:0000287,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=magnesium ion binding|0000287||IEA,hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224828.1;locus_tag=NLI98_RS22630;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_004152191.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4673238 4675151 . + . ID=gene-NLI98_RS22635;Name=iolC;gbkey=Gene;gene=iolC;gene_biotype=protein_coding;locus_tag=NLI98_RS22635;old_locus_tag=NLI98_22625 NZ_CP100601.1 Protein Homology CDS 4673238 4675151 . + 0 ID=cds-WP_088497955.1;Parent=gene-NLI98_RS22635;Dbxref=Genbank:WP_088497955.1;Name=WP_088497955.1;Ontology_term=GO:0019310,GO:0047590;gbkey=CDS;gene=iolC;go_function=5-dehydro-2-deoxygluconokinase activity|0047590||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224826.1;locus_tag=NLI98_RS22635;product=5-dehydro-2-deoxygluconokinase;protein_id=WP_088497955.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4675303 4676160 . + . ID=gene-NLI98_RS22640;Name=NLI98_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22640;old_locus_tag=NLI98_22630 NZ_CP100601.1 Protein Homology CDS 4675303 4676160 . + 0 ID=cds-WP_004152190.1;Parent=gene-NLI98_RS22640;Dbxref=Genbank:WP_004152190.1;Name=WP_004152190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224825.1;locus_tag=NLI98_RS22640;product=MurR/RpiR family transcriptional regulator;protein_id=WP_004152190.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4677644 4678453 . - . ID=gene-NLI98_RS22645;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=NLI98_RS22645;old_locus_tag=NLI98_22635 NZ_CP100601.1 Protein Homology CDS 4677644 4678453 . - 0 ID=cds-WP_004177654.1;Parent=gene-NLI98_RS22645;Dbxref=Genbank:WP_004177654.1;Name=WP_004177654.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224824.1;locus_tag=NLI98_RS22645;product=5-deoxy-glucuronate isomerase;protein_id=WP_004177654.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4678472 4679977 . - . ID=gene-NLI98_RS22650;Name=NLI98_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22650;old_locus_tag=NLI98_22640 NZ_CP100601.1 Protein Homology CDS 4678472 4679977 . - 0 ID=cds-WP_004146794.1;Parent=gene-NLI98_RS22650;Dbxref=Genbank:WP_004146794.1;Name=WP_004146794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224823.1;locus_tag=NLI98_RS22650;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_004146794.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4680329 4681150 . + . ID=gene-NLI98_RS22655;Name=NLI98_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22655;old_locus_tag=NLI98_22645 NZ_CP100601.1 Protein Homology CDS 4680329 4681150 . + 0 ID=cds-WP_004178392.1;Parent=gene-NLI98_RS22655;Dbxref=Genbank:WP_004178392.1;Name=WP_004178392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224822.1;locus_tag=NLI98_RS22655;product=TIM barrel protein;protein_id=WP_004178392.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4681249 4682751 . + . ID=gene-NLI98_RS22660;Name=NLI98_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22660;old_locus_tag=NLI98_22650 NZ_CP100601.1 Protein Homology CDS 4681249 4682751 . + 0 ID=cds-WP_021464761.1;Parent=gene-NLI98_RS22660;Dbxref=Genbank:WP_021464761.1;Name=WP_021464761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224821.1;locus_tag=NLI98_RS22660;product=DUF853 domain-containing protein;protein_id=WP_021464761.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4682800 4683882 . - . ID=gene-NLI98_RS22665;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=NLI98_RS22665;old_locus_tag=NLI98_22655 NZ_CP100601.1 Protein Homology CDS 4682800 4683882 . - 0 ID=cds-WP_002886956.1;Parent=gene-NLI98_RS22665;Dbxref=Genbank:WP_002886956.1;Name=WP_002886956.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224820.1;locus_tag=NLI98_RS22665;product=LPS export ABC transporter permease LptG;protein_id=WP_002886956.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4683882 4684979 . - . ID=gene-NLI98_RS22670;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=NLI98_RS22670;old_locus_tag=NLI98_22660 NZ_CP100601.1 Protein Homology CDS 4683882 4684979 . - 0 ID=cds-WP_088497958.1;Parent=gene-NLI98_RS22670;Dbxref=Genbank:WP_088497958.1;Name=WP_088497958.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224819.1;locus_tag=NLI98_RS22670;product=LPS export ABC transporter permease LptF;protein_id=WP_088497958.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4685369 4686880 . + . ID=gene-NLI98_RS22675;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=NLI98_RS22675;old_locus_tag=NLI98_22665 NZ_CP100601.1 Protein Homology CDS 4685369 4686880 . + 0 ID=cds-WP_004206531.1;Parent=gene-NLI98_RS22675;Dbxref=Genbank:WP_004206531.1;Name=WP_004206531.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224818.1;locus_tag=NLI98_RS22675;product=leucyl aminopeptidase;protein_id=WP_004206531.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4687000 4687443 . + . ID=gene-NLI98_RS22680;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=NLI98_RS22680;old_locus_tag=NLI98_22670 NZ_CP100601.1 Protein Homology CDS 4687000 4687443 . + 0 ID=cds-WP_002886953.1;Parent=gene-NLI98_RS22680;Dbxref=Genbank:WP_002886953.1;Name=WP_002886953.1;gbkey=CDS;gene=holC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098129.1;locus_tag=NLI98_RS22680;product=DNA polymerase III subunit chi;protein_id=WP_002886953.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4687443 4690298 . + . ID=gene-NLI98_RS22685;Name=NLI98_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22685;old_locus_tag=NLI98_22675 NZ_CP100601.1 Protein Homology CDS 4687443 4690298 . + 0 ID=cds-WP_009486532.1;Parent=gene-NLI98_RS22685;Dbxref=Genbank:WP_009486532.1;Name=WP_009486532.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000416368.1;locus_tag=NLI98_RS22685;product=valine--tRNA ligase;protein_id=WP_009486532.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4690419 4690922 . + . ID=gene-NLI98_RS22690;Name=NLI98_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22690;old_locus_tag=NLI98_22680 NZ_CP100601.1 Protein Homology CDS 4690419 4690922 . + 0 ID=cds-WP_004152275.1;Parent=gene-NLI98_RS22690;Dbxref=Genbank:WP_004152275.1;Name=WP_004152275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224815.1;locus_tag=NLI98_RS22690;product=GNAT family N-acetyltransferase;protein_id=WP_004152275.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4691195 4691959 . - . ID=gene-NLI98_RS22695;Name=NLI98_RS22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22695;old_locus_tag=NLI98_22685 NZ_CP100601.1 Protein Homology CDS 4691195 4691959 . - 0 ID=cds-WP_048978320.1;Parent=gene-NLI98_RS22695;Dbxref=Genbank:WP_048978320.1;Name=WP_048978320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224814.1;locus_tag=NLI98_RS22695;product=tRNA-(ms[2]io[6]A)-hydroxylase;protein_id=WP_048978320.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4692018 4692440 . - . ID=gene-NLI98_RS22700;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=NLI98_RS22700;old_locus_tag=NLI98_22690 NZ_CP100601.1 Protein Homology CDS 4692018 4692440 . - 0 ID=cds-WP_002886947.1;Parent=gene-NLI98_RS22700;Dbxref=Genbank:WP_002886947.1;Name=WP_002886947.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224813.1;locus_tag=NLI98_RS22700;product=ribonuclease E inhibitor RraB;protein_id=WP_002886947.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4692604 4693608 . + . ID=gene-NLI98_RS22705;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=NLI98_RS22705;old_locus_tag=NLI98_22695 NZ_CP100601.1 Protein Homology CDS 4692604 4693608 . + 0 ID=cds-WP_002886946.1;Parent=gene-NLI98_RS22705;Dbxref=Genbank:WP_002886946.1;Name=WP_002886946.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224812.1;locus_tag=NLI98_RS22705;product=ornithine carbamoyltransferase;protein_id=WP_002886946.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4693611 4694336 . - . ID=gene-NLI98_RS22710;Name=NLI98_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22710;old_locus_tag=NLI98_22700 NZ_CP100601.1 Protein Homology CDS 4693611 4694336 . - 0 ID=cds-WP_002886945.1;Parent=gene-NLI98_RS22710;Dbxref=Genbank:WP_002886945.1;Name=WP_002886945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224811.1;locus_tag=NLI98_RS22710;product=GntR family transcriptional regulator;protein_id=WP_002886945.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4694421 4695839 . - . ID=gene-NLI98_RS22715;Name=NLI98_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22715;old_locus_tag=NLI98_22705 NZ_CP100601.1 Protein Homology CDS 4694421 4695839 . - 0 ID=cds-WP_004186723.1;Parent=gene-NLI98_RS22715;Dbxref=Genbank:WP_004186723.1;Name=WP_004186723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224810.1;locus_tag=NLI98_RS22715;product=YfcC family protein;protein_id=WP_004186723.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4695896 4697461 . - . ID=gene-NLI98_RS22720;Name=NLI98_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22720;old_locus_tag=NLI98_22710 NZ_CP100601.1 Protein Homology CDS 4695896 4697461 . - 0 ID=cds-WP_040190180.1;Parent=gene-NLI98_RS22720;Dbxref=Genbank:WP_040190180.1;Name=WP_040190180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224809.1;locus_tag=NLI98_RS22720;product=amidohydrolase family protein;protein_id=WP_040190180.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4697556 4698386 . - . ID=gene-NLI98_RS22725;Name=NLI98_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22725;old_locus_tag=NLI98_22715 NZ_CP100601.1 Protein Homology CDS 4697556 4698386 . - 0 ID=cds-WP_002886941.1;Parent=gene-NLI98_RS22725;Dbxref=Genbank:WP_002886941.1;Name=WP_002886941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224808.1;locus_tag=NLI98_RS22725;product=PfkB family carbohydrate kinase;protein_id=WP_002886941.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4698398 4699372 . - . ID=gene-NLI98_RS22730;Name=NLI98_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22730;old_locus_tag=NLI98_22720 NZ_CP100601.1 Protein Homology CDS 4698398 4699372 . - 0 ID=cds-WP_002886940.1;Parent=gene-NLI98_RS22730;Dbxref=Genbank:WP_002886940.1;Name=WP_002886940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224807.1;locus_tag=NLI98_RS22730;product=SIS domain-containing protein;protein_id=WP_002886940.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4699615 4700067 . - . ID=gene-NLI98_RS22735;Name=NLI98_RS22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22735;old_locus_tag=NLI98_22725 NZ_CP100601.1 Protein Homology CDS 4699615 4700067 . - 0 ID=cds-WP_064164221.1;Parent=gene-NLI98_RS22735;Dbxref=Genbank:WP_064164221.1;Name=WP_064164221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224805.1;locus_tag=NLI98_RS22735;product=YhcH/YjgK/YiaL family protein;protein_id=WP_064164221.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4700262 4700366 . + . ID=gene-NLI98_RS22740;Name=NLI98_RS22740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22740;old_locus_tag=NLI98_22730 NZ_CP100601.1 Protein Homology CDS 4700262 4700366 . + 0 ID=cds-WP_002886930.1;Parent=gene-NLI98_RS22740;Dbxref=Genbank:WP_002886930.1;Name=WP_002886930.1;Ontology_term=GO:0019856;gbkey=CDS;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002886930.1;locus_tag=NLI98_RS22740;product=pyrBI operon leader peptide;protein_id=WP_002886930.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4700341 4700400 . + . ID=gene-NLI98_RS22745;Name=NLI98_RS22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22745;old_locus_tag=NLI98_22735 NZ_CP100601.1 Protein Homology CDS 4700341 4700400 . + 0 ID=cds-WP_227650304.1;Parent=gene-NLI98_RS22745;Dbxref=Genbank:WP_227650304.1;Name=WP_227650304.1;Ontology_term=GO:0019856;gbkey=CDS;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: protein motif:HMM:NF019664.2;locus_tag=NLI98_RS22745;product=pyrBI operon leader peptide;protein_id=WP_227650304.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4700403 4701338 . + . ID=gene-NLI98_RS22750;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=NLI98_RS22750;old_locus_tag=NLI98_22740 NZ_CP100601.1 Protein Homology CDS 4700403 4701338 . + 0 ID=cds-WP_002886928.1;Parent=gene-NLI98_RS22750;Dbxref=Genbank:WP_002886928.1;Name=WP_002886928.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224804.1;locus_tag=NLI98_RS22750;product=aspartate carbamoyltransferase;protein_id=WP_002886928.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4701352 4701813 . + . ID=gene-NLI98_RS22755;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=NLI98_RS22755;old_locus_tag=NLI98_22745 NZ_CP100601.1 Protein Homology CDS 4701352 4701813 . + 0 ID=cds-WP_002886927.1;Parent=gene-NLI98_RS22755;Dbxref=Genbank:WP_002886927.1;Name=WP_002886927.1;Ontology_term=GO:0009220,GO:0004070;gbkey=CDS;gene=pyrI;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000148566.1;locus_tag=NLI98_RS22755;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_002886927.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4701966 4702352 . + . ID=gene-NLI98_RS22760;Name=ridA;gbkey=Gene;gene=ridA;gene_biotype=protein_coding;locus_tag=NLI98_RS22760;old_locus_tag=NLI98_22750 NZ_CP100601.1 Protein Homology CDS 4701966 4702352 . + 0 ID=cds-WP_002886926.1;Parent=gene-NLI98_RS22760;Dbxref=Genbank:WP_002886926.1;Name=WP_002886926.1;gbkey=CDS;gene=ridA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224802.1;locus_tag=NLI98_RS22760;product=2-iminobutanoate/2-iminopropanoate deaminase;protein_id=WP_002886926.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4702428 4705133 . - . ID=gene-NLI98_RS22765;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=NLI98_RS22765;old_locus_tag=NLI98_22755 NZ_CP100601.1 Protein Homology CDS 4702428 4705133 . - 0 ID=cds-WP_088497959.1;Parent=gene-NLI98_RS22765;Dbxref=Genbank:WP_088497959.1;Name=WP_088497959.1;Ontology_term=GO:0015693,GO:0015444;gbkey=CDS;gene=mgtA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224801.1;locus_tag=NLI98_RS22765;product=magnesium-translocating P-type ATPase;protein_id=WP_088497959.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4705513 4706460 . + . ID=gene-NLI98_RS22770;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=NLI98_RS22770;old_locus_tag=NLI98_22760 NZ_CP100601.1 Protein Homology CDS 4705513 4706460 . + 0 ID=cds-WP_004192384.1;Parent=gene-NLI98_RS22770;Dbxref=Genbank:WP_004192384.1;Name=WP_004192384.1;Ontology_term=GO:0005975,GO:0006355,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224800.1;locus_tag=NLI98_RS22770;product=trehalose operon repressor TreR;protein_id=WP_004192384.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4706592 4708010 . + . ID=gene-NLI98_RS22775;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=NLI98_RS22775;old_locus_tag=NLI98_22765 NZ_CP100601.1 Protein Homology CDS 4706592 4708010 . + 0 ID=cds-WP_004186710.1;Parent=gene-NLI98_RS22775;Dbxref=Genbank:WP_004186710.1;Name=WP_004186710.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224799.1;locus_tag=NLI98_RS22775;product=PTS trehalose transporter subunit IIBC;protein_id=WP_004186710.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4708062 4709717 . + . ID=gene-NLI98_RS22780;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=NLI98_RS22780;old_locus_tag=NLI98_22770 NZ_CP100601.1 Protein Homology CDS 4708062 4709717 . + 0 ID=cds-WP_264452002.1;Parent=gene-NLI98_RS22780;Dbxref=Genbank:WP_264452002.1;Name=WP_264452002.1;Ontology_term=GO:0005991,GO:0008788;gbkey=CDS;gene=treC;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224798.1;locus_tag=NLI98_RS22780;product=alpha%2Calpha-phosphotrehalase;protein_id=WP_264452002.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4709773 4711125 . - . ID=gene-NLI98_RS22785;Name=celB;gbkey=Gene;gene=celB;gene_biotype=protein_coding;locus_tag=NLI98_RS22785;old_locus_tag=NLI98_22775 NZ_CP100601.1 Protein Homology CDS 4709773 4711125 . - 0 ID=cds-WP_004177661.1;Parent=gene-NLI98_RS22785;Dbxref=Genbank:WP_004177661.1;Name=WP_004177661.1;Ontology_term=GO:0009401,GO:0008982,GO:0019191;gbkey=CDS;gene=celB;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,cellobiose transmembrane transporter activity|0019191||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224797.1;locus_tag=NLI98_RS22785;product=PTS cellobiose transporter subunit IIC;protein_id=WP_004177661.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4711152 4712459 . - . ID=gene-NLI98_RS22790;Name=NLI98_RS22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22790;old_locus_tag=NLI98_22780 NZ_CP100601.1 Protein Homology CDS 4711152 4712459 . - 0 ID=cds-WP_004177662.1;Parent=gene-NLI98_RS22790;Dbxref=Genbank:WP_004177662.1;Name=WP_004177662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224796.1;locus_tag=NLI98_RS22790;product=6-phospho-beta-glucosidase;protein_id=WP_004177662.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4712550 4712858 . - . ID=gene-NLI98_RS22795;Name=NLI98_RS22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22795;old_locus_tag=NLI98_22785 NZ_CP100601.1 Protein Homology CDS 4712550 4712858 . - 0 ID=cds-WP_012737232.1;Parent=gene-NLI98_RS22795;Dbxref=Genbank:WP_012737232.1;Name=WP_012737232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178377.1;locus_tag=NLI98_RS22795;product=PTS sugar transporter subunit IIB;protein_id=WP_012737232.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4712943 4713116 . + . ID=gene-NLI98_RS22800;Name=NLI98_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22800;old_locus_tag=NLI98_22790 NZ_CP100601.1 Protein Homology CDS 4712943 4713116 . + 0 ID=cds-WP_032408826.1;Parent=gene-NLI98_RS22800;Dbxref=Genbank:WP_032408826.1;Name=WP_032408826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224794.1;locus_tag=NLI98_RS22800;product=hypothetical protein;protein_id=WP_032408826.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4713119 4713862 . + . ID=gene-NLI98_RS22805;Name=NLI98_RS22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22805;old_locus_tag=NLI98_22795 NZ_CP100601.1 Protein Homology CDS 4713119 4713862 . + 0 ID=cds-WP_032103425.1;Parent=gene-NLI98_RS22805;Dbxref=Genbank:WP_032103425.1;Name=WP_032103425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224793.1;locus_tag=NLI98_RS22805;product=MurR/RpiR family transcriptional regulator;protein_id=WP_032103425.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4714219 4716357 . + . ID=gene-NLI98_RS22810;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=NLI98_RS22810;old_locus_tag=NLI98_22800 NZ_CP100601.1 Protein Homology CDS 4714219 4716357 . + 0 ID=cds-WP_040164650.1;Parent=gene-NLI98_RS22810;Dbxref=Genbank:WP_040164650.1;Name=WP_040164650.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224791.1;locus_tag=NLI98_RS22810;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_040164650.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4716679 4717143 . + . ID=gene-NLI98_RS22815;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=NLI98_RS22815;old_locus_tag=NLI98_22805 NZ_CP100601.1 Protein Homology CDS 4716679 4717143 . + 0 ID=cds-WP_088497964.1;Parent=gene-NLI98_RS22815;Dbxref=Genbank:WP_088497964.1;Name=WP_088497964.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224790.1;locus_tag=NLI98_RS22815;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_088497964.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4717161 4719071 . - . ID=gene-NLI98_RS22820;Name=NLI98_RS22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22820;old_locus_tag=NLI98_22810 NZ_CP100601.1 Protein Homology CDS 4717161 4719071 . - 0 ID=cds-WP_004152270.1;Parent=gene-NLI98_RS22820;Dbxref=Genbank:WP_004152270.1;Name=WP_004152270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224787.1;locus_tag=NLI98_RS22820;product=BglG family transcription antiterminator;protein_id=WP_004152270.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4719094 4720248 . - . ID=gene-NLI98_RS22825;Name=NLI98_RS22825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22825;old_locus_tag=NLI98_22815 NZ_CP100601.1 Protein Homology CDS 4719094 4720248 . - 0 ID=cds-WP_088497960.1;Parent=gene-NLI98_RS22825;Dbxref=Genbank:WP_088497960.1;Name=WP_088497960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224786.1;locus_tag=NLI98_RS22825;product=lactonase family protein;protein_id=WP_088497960.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4720315 4721055 . - . ID=gene-NLI98_RS22830;Name=NLI98_RS22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22830;old_locus_tag=NLI98_22820 NZ_CP100601.1 Protein Homology CDS 4720315 4721055 . - 0 ID=cds-WP_002886899.1;Parent=gene-NLI98_RS22830;Dbxref=Genbank:WP_002886899.1;Name=WP_002886899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224785.1;locus_tag=NLI98_RS22830;product=KDGP aldolase family protein;protein_id=WP_002886899.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4721052 4722170 . - . ID=gene-NLI98_RS22835;Name=NLI98_RS22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22835;old_locus_tag=NLI98_22825 NZ_CP100601.1 Protein Homology CDS 4721052 4722170 . - 0 ID=cds-WP_088497961.1;Parent=gene-NLI98_RS22835;Dbxref=Genbank:WP_088497961.1;Name=WP_088497961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224784.1;locus_tag=NLI98_RS22835;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;protein_id=WP_088497961.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4722154 4723287 . - . ID=gene-NLI98_RS22840;Name=NLI98_RS22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22840;old_locus_tag=NLI98_22830 NZ_CP100601.1 Protein Homology CDS 4722154 4723287 . - 0 ID=cds-WP_088497962.1;Parent=gene-NLI98_RS22840;Dbxref=Genbank:WP_088497962.1;Name=WP_088497962.1;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224783.1;locus_tag=NLI98_RS22840;product=amidohydrolase/deacetylase family metallohydrolase;protein_id=WP_088497962.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4723400 4724044 . - . ID=gene-NLI98_RS22845;Name=NLI98_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22845;old_locus_tag=NLI98_22835 NZ_CP100601.1 Protein Homology CDS 4723400 4724044 . - 0 ID=cds-WP_004152267.1;Parent=gene-NLI98_RS22845;Dbxref=Genbank:WP_004152267.1;Name=WP_004152267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224782.1;locus_tag=NLI98_RS22845;product=DUF4310 family protein;protein_id=WP_004152267.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4724058 4724834 . - . ID=gene-NLI98_RS22850;Name=NLI98_RS22850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22850;old_locus_tag=NLI98_22840 NZ_CP100601.1 Protein Homology CDS 4724058 4724834 . - 0 ID=cds-WP_025712307.1;Parent=gene-NLI98_RS22850;Dbxref=Genbank:WP_025712307.1;Name=WP_025712307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224781.1;locus_tag=NLI98_RS22850;product=DUF4311 domain-containing protein;protein_id=WP_025712307.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4724856 4725155 . - . ID=gene-NLI98_RS22855;Name=NLI98_RS22855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22855;old_locus_tag=NLI98_22845 NZ_CP100601.1 Protein Homology CDS 4724856 4725155 . - 0 ID=cds-WP_002886896.1;Parent=gene-NLI98_RS22855;Dbxref=Genbank:WP_002886896.1;Name=WP_002886896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224780.1;locus_tag=NLI98_RS22855;product=DUF4312 family protein;protein_id=WP_002886896.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4725158 4725520 . - . ID=gene-NLI98_RS22860;Name=NLI98_RS22860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22860;old_locus_tag=NLI98_22850 NZ_CP100601.1 Protein Homology CDS 4725158 4725520 . - 0 ID=cds-WP_002886895.1;Parent=gene-NLI98_RS22860;Dbxref=Genbank:WP_002886895.1;Name=WP_002886895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224779.1;locus_tag=NLI98_RS22860;product=SFCGS family glycine-rich protein;protein_id=WP_002886895.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4725531 4725869 . - . ID=gene-NLI98_RS22865;Name=NLI98_RS22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22865;old_locus_tag=NLI98_22855 NZ_CP100601.1 Protein Homology CDS 4725531 4725869 . - 0 ID=cds-WP_002886894.1;Parent=gene-NLI98_RS22865;Dbxref=Genbank:WP_002886894.1;Name=WP_002886894.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224778.1;locus_tag=NLI98_RS22865;product=PRD domain-containing protein;protein_id=WP_002886894.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4725973 4726104 . + . ID=gene-NLI98_RS22870;Name=NLI98_RS22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22870;old_locus_tag=NLI98_22860 NZ_CP100601.1 Protein Homology CDS 4725973 4726104 . + 0 ID=cds-WP_004146765.1;Parent=gene-NLI98_RS22870;Dbxref=Genbank:WP_004146765.1;Name=WP_004146765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224777.1;locus_tag=NLI98_RS22870;product=hypothetical protein;protein_id=WP_004146765.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4726159 4726545 . - . ID=gene-NLI98_RS22875;Name=cybC;gbkey=Gene;gene=cybC;gene_biotype=protein_coding;locus_tag=NLI98_RS22875;old_locus_tag=NLI98_22865 NZ_CP100601.1 Protein Homology CDS 4726159 4726545 . - 0 ID=cds-WP_002886893.1;Parent=gene-NLI98_RS22875;Dbxref=Genbank:WP_002886893.1;Name=WP_002886893.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0042597;gbkey=CDS;gene=cybC;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224776.1;locus_tag=NLI98_RS22875;product=cytochrome b562;protein_id=WP_002886893.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4726582 4727934 . - . ID=gene-NLI98_RS22880;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=NLI98_RS22880;old_locus_tag=NLI98_22870 NZ_CP100601.1 Protein Homology CDS 4726582 4727934 . - 0 ID=cds-WP_088497963.1;Parent=gene-NLI98_RS22880;Dbxref=Genbank:WP_088497963.1;Name=WP_088497963.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463299.1;locus_tag=NLI98_RS22880;product=metalloprotease PmbA;protein_id=WP_088497963.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4728030 4728581 . + . ID=gene-NLI98_RS22885;Name=NLI98_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22885;old_locus_tag=NLI98_22875 NZ_CP100601.1 Protein Homology CDS 4728030 4728581 . + 0 ID=cds-WP_004177664.1;Parent=gene-NLI98_RS22885;Dbxref=Genbank:WP_004177664.1;Name=WP_004177664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224774.1;locus_tag=NLI98_RS22885;product=ribosome-associated protein;protein_id=WP_004177664.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4729000 4730363 . + . ID=gene-NLI98_RS22890;Name=NLI98_RS22890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22890;old_locus_tag=NLI98_22880 NZ_CP100601.1 Protein Homology CDS 4729000 4729468 . + 0 ID=cds-WP_087661600.1;Parent=gene-NLI98_RS22890;Dbxref=Genbank:WP_087661600.1;Name=WP_087661600.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1;locus_tag=NLI98_RS22890;product=IS3-like element ISKpn1 family transposase;protein_id=WP_087661600.1;transl_table=11 NZ_CP100601.1 Protein Homology CDS 4729468 4730363 . + 2 ID=cds-WP_087661600.1;Parent=gene-NLI98_RS22890;Dbxref=Genbank:WP_087661600.1;Name=WP_087661600.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611151.1;locus_tag=NLI98_RS22890;product=IS3-like element ISKpn1 family transposase;protein_id=WP_087661600.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4730488 4730604 . - . ID=gene-NLI98_RS22895;Name=NLI98_RS22895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22895;old_locus_tag=NLI98_22885 NZ_CP100601.1 Protein Homology CDS 4730488 4730604 . - 0 ID=cds-WP_172676857.1;Parent=gene-NLI98_RS22895;Dbxref=Genbank:WP_172676857.1;Name=WP_172676857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224773.1;locus_tag=NLI98_RS22895;product=hypothetical protein;protein_id=WP_172676857.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4730789 4731997 . + . ID=gene-NLI98_RS22900;Name=NLI98_RS22900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22900;old_locus_tag=NLI98_22890 NZ_CP100601.1 Protein Homology CDS 4730789 4731997 . + 0 ID=cds-WP_002886890.1;Parent=gene-NLI98_RS22900;Dbxref=Genbank:WP_002886890.1;Name=WP_002886890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224772.1;locus_tag=NLI98_RS22900;product=aldose 1-epimerase family protein;protein_id=WP_002886890.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4732041 4732568 . - . ID=gene-NLI98_RS22905;Name=NLI98_RS22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22905;old_locus_tag=NLI98_22895 NZ_CP100601.1 Protein Homology CDS 4732041 4732568 . - 0 ID=cds-WP_002886889.1;Parent=gene-NLI98_RS22905;Dbxref=Genbank:WP_002886889.1;Name=WP_002886889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224771.1;locus_tag=NLI98_RS22905;product=GNAT family N-acetyltransferase;protein_id=WP_002886889.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4732637 4734010 . - . ID=gene-NLI98_RS22910;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=NLI98_RS22910;old_locus_tag=NLI98_22900 NZ_CP100601.1 Protein Homology CDS 4732637 4734010 . - 0 ID=cds-WP_002886886.1;Parent=gene-NLI98_RS22910;Dbxref=Genbank:WP_002886886.1;Name=WP_002886886.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224770.1;locus_tag=NLI98_RS22910;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_002886886.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4734186 4735184 . + . ID=gene-NLI98_RS22915;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=NLI98_RS22915;old_locus_tag=NLI98_22905 NZ_CP100601.1 Protein Homology CDS 4734186 4735184 . + 0 ID=cds-WP_002886827.1;Parent=gene-NLI98_RS22915;Dbxref=Genbank:WP_002886827.1;Name=WP_002886827.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016233757.1;locus_tag=NLI98_RS22915;product=class 1 fructose-bisphosphatase;protein_id=WP_002886827.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4735227 4736225 . - . ID=gene-NLI98_RS22920;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=NLI98_RS22920;old_locus_tag=NLI98_22910 NZ_CP100601.1 Protein Homology CDS 4735227 4736225 . - 0 ID=cds-WP_002886825.1;Parent=gene-NLI98_RS22920;Dbxref=Genbank:WP_002886825.1;Name=WP_002886825.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjfF;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704695.1;locus_tag=NLI98_RS22920;product=sugar ABC transporter permease YjfF;protein_id=WP_002886825.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4736212 4737237 . - . ID=gene-NLI98_RS22925;Name=NLI98_RS22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22925;old_locus_tag=NLI98_22915 NZ_CP100601.1 Protein Homology CDS 4736212 4737237 . - 0 ID=cds-WP_004152011.1;Parent=gene-NLI98_RS22925;Dbxref=Genbank:WP_004152011.1;Name=WP_004152011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224767.1;locus_tag=NLI98_RS22925;product=ABC transporter permease;protein_id=WP_004152011.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4737248 4738750 . - . ID=gene-NLI98_RS22930;Name=NLI98_RS22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22930;old_locus_tag=NLI98_22920 NZ_CP100601.1 Protein Homology CDS 4737248 4738750 . - 0 ID=cds-WP_002886772.1;Parent=gene-NLI98_RS22930;Dbxref=Genbank:WP_002886772.1;Name=WP_002886772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224766.1;locus_tag=NLI98_RS22930;product=sugar ABC transporter ATP-binding protein;protein_id=WP_002886772.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4738874 4739830 . - . ID=gene-NLI98_RS22935;Name=NLI98_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22935;old_locus_tag=NLI98_22925 NZ_CP100601.1 Protein Homology CDS 4738874 4739830 . - 0 ID=cds-WP_002886769.1;Parent=gene-NLI98_RS22935;Dbxref=Genbank:WP_002886769.1;Name=WP_002886769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313232.1;locus_tag=NLI98_RS22935;product=ABC transporter substrate-binding protein;protein_id=WP_002886769.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4740234 4740764 . + . ID=gene-NLI98_RS22940;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=NLI98_RS22940;old_locus_tag=NLI98_22930 NZ_CP100601.1 Protein Homology CDS 4740234 4740764 . + 0 ID=cds-WP_002886766.1;Parent=gene-NLI98_RS22940;Dbxref=Genbank:WP_002886766.1;Name=WP_002886766.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1;locus_tag=NLI98_RS22940;product=inorganic diphosphatase;protein_id=WP_002886766.1;transl_table=11 NZ_CP100601.1 RefSeq pseudogene 4740839 4741009 . + . ID=gene-NLI98_RS22945;Name=NLI98_RS22945;end_range=4741009,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS22945;old_locus_tag=NLI98_22935;partial=true;pseudo=true NZ_CP100601.1 Protein Homology CDS 4740839 4741009 . + 0 ID=cds-NLI98_RS22945;Parent=gene-NLI98_RS22945;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4741009,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224762.1;locus_tag=NLI98_RS22945;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP100601.1 RefSeq gene 4741142 4741486 . - . ID=gene-NLI98_RS22950;Name=NLI98_RS22950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22950;old_locus_tag=NLI98_22940 NZ_CP100601.1 Protein Homology CDS 4741142 4741486 . - 0 ID=cds-WP_002886724.1;Parent=gene-NLI98_RS22950;Dbxref=Genbank:WP_002886724.1;Name=WP_002886724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012907370.1;locus_tag=NLI98_RS22950;product=gamma-glutamylcyclotransferase;protein_id=WP_002886724.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4741489 4745265 . - . ID=gene-NLI98_RS22955;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=NLI98_RS22955;old_locus_tag=NLI98_22945 NZ_CP100601.1 Protein Homology CDS 4741489 4745265 . - 0 ID=cds-WP_088498022.1;Parent=gene-NLI98_RS22955;Dbxref=Genbank:WP_088498022.1;Name=WP_088498022.1;gbkey=CDS;gene=tamB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224759.1;locus_tag=NLI98_RS22955;product=autotransporter assembly complex protein TamB;protein_id=WP_088498022.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4745262 4746995 . - . ID=gene-NLI98_RS22960;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=NLI98_RS22960;old_locus_tag=NLI98_22950 NZ_CP100601.1 Protein Homology CDS 4745262 4746995 . - 0 ID=cds-WP_004178361.1;Parent=gene-NLI98_RS22960;Dbxref=Genbank:WP_004178361.1;Name=WP_004178361.1;gbkey=CDS;gene=tamA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224758.1;locus_tag=NLI98_RS22960;product=autotransporter assembly complex protein TamA;protein_id=WP_004178361.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4747204 4747842 . + . ID=gene-NLI98_RS22965;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=NLI98_RS22965;old_locus_tag=NLI98_22955 NZ_CP100601.1 Protein Homology CDS 4747204 4747842 . + 0 ID=cds-WP_002886721.1;Parent=gene-NLI98_RS22965;Dbxref=Genbank:WP_002886721.1;Name=WP_002886721.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224757.1;locus_tag=NLI98_RS22965;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_002886721.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4748023 4749360 . + . ID=gene-NLI98_RS22970;Name=NLI98_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22970;old_locus_tag=NLI98_22960 NZ_CP100601.1 Protein Homology CDS 4748023 4749360 . + 0 ID=cds-WP_002886718.1;Parent=gene-NLI98_RS22970;Dbxref=Genbank:WP_002886718.1;Name=WP_002886718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224756.1;locus_tag=NLI98_RS22970;product=hemolysin family protein;protein_id=WP_002886718.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4749562 4750794 . + . ID=gene-NLI98_RS22975;Name=NLI98_RS22975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22975;old_locus_tag=NLI98_22965 NZ_CP100601.1 Protein Homology CDS 4749562 4750794 . + 0 ID=cds-WP_020324899.1;Parent=gene-NLI98_RS22975;Dbxref=Genbank:WP_020324899.1;Name=WP_020324899.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206484.1;locus_tag=NLI98_RS22975;product=oligosaccharide MFS transporter;protein_id=WP_020324899.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4750813 4752822 . + . ID=gene-NLI98_RS22980;Name=NLI98_RS22980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22980;old_locus_tag=NLI98_22970 NZ_CP100601.1 Protein Homology CDS 4750813 4752822 . + 0 ID=cds-WP_004222103.1;Parent=gene-NLI98_RS22980;Dbxref=Genbank:WP_004222103.1;Name=WP_004222103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543097.1;locus_tag=NLI98_RS22980;product=beta-galactosidase;protein_id=WP_004222103.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4752853 4753725 . + . ID=gene-NLI98_RS22985;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=NLI98_RS22985;old_locus_tag=NLI98_22975 NZ_CP100601.1 Protein Homology CDS 4752853 4753725 . + 0 ID=cds-WP_004178353.1;Parent=gene-NLI98_RS22985;Dbxref=Genbank:WP_004178353.1;Name=WP_004178353.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014227637.1;locus_tag=NLI98_RS22985;product=arabinose operon transcriptional regulator AraC;protein_id=WP_004178353.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4753787 4753993 . - . ID=gene-NLI98_RS22990;Name=NLI98_RS22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22990;old_locus_tag=NLI98_22980 NZ_CP100601.1 Protein Homology CDS 4753787 4753993 . - 0 ID=cds-WP_002886707.1;Parent=gene-NLI98_RS22990;Dbxref=Genbank:WP_002886707.1;Name=WP_002886707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966176.1;locus_tag=NLI98_RS22990;product=DUF1107 domain-containing protein;protein_id=WP_002886707.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4754317 4754874 . + . ID=gene-NLI98_RS22995;Name=NLI98_RS22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS22995;old_locus_tag=NLI98_22985 NZ_CP100601.1 Protein Homology CDS 4754317 4754874 . + 0 ID=cds-WP_002886706.1;Parent=gene-NLI98_RS22995;Dbxref=Genbank:WP_002886706.1;Name=WP_002886706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224754.1;locus_tag=NLI98_RS22995;product=YtfJ family protein;protein_id=WP_002886706.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4754864 4755607 . - . ID=gene-NLI98_RS23000;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=NLI98_RS23000;old_locus_tag=NLI98_22990 NZ_CP100601.1 Protein Homology CDS 4754864 4755607 . - 0 ID=cds-WP_002886705.1;Parent=gene-NLI98_RS23000;Dbxref=Genbank:WP_002886705.1;Name=WP_002886705.1;Ontology_term=GO:0046855,GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463265.1;locus_tag=NLI98_RS23000;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_002886705.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4755799 4757742 . + . ID=gene-NLI98_RS23005;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=NLI98_RS23005;old_locus_tag=NLI98_22995 NZ_CP100601.1 Protein Homology CDS 4755799 4757742 . + 0 ID=cds-WP_088498021.1;Parent=gene-NLI98_RS23005;Dbxref=Genbank:WP_088498021.1;Name=WP_088498021.1;Ontology_term=GO:0006139,GO:0008663,GO:0009897,GO:0030288;gbkey=CDS;gene=cpdB;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224752.1;locus_tag=NLI98_RS23005;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=WP_088498021.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4757797 4758168 . - . ID=gene-NLI98_RS23010;Name=NLI98_RS23010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23010;old_locus_tag=NLI98_23000 NZ_CP100601.1 Protein Homology CDS 4757797 4758168 . - 0 ID=cds-WP_004152015.1;Parent=gene-NLI98_RS23010;Dbxref=Genbank:WP_004152015.1;Name=WP_004152015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224751.1;locus_tag=NLI98_RS23010;product=helix-turn-helix transcriptional regulator;protein_id=WP_004152015.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4758258 4759106 . + . ID=gene-NLI98_RS23015;Name=NLI98_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23015;old_locus_tag=NLI98_23005 NZ_CP100601.1 Protein Homology CDS 4758258 4759106 . + 0 ID=cds-WP_002886702.1;Parent=gene-NLI98_RS23015;Dbxref=Genbank:WP_002886702.1;Name=WP_002886702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224750.1;locus_tag=NLI98_RS23015;product=SDR family oxidoreductase;protein_id=WP_002886702.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4759184 4760008 . + . ID=gene-NLI98_RS23020;Name=NLI98_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23020;old_locus_tag=NLI98_23010 NZ_CP100601.1 Protein Homology CDS 4759184 4760008 . + 0 ID=cds-WP_002886699.1;Parent=gene-NLI98_RS23020;Dbxref=Genbank:WP_002886699.1;Name=WP_002886699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224749.1;locus_tag=NLI98_RS23020;product=AraC family transcriptional regulator;protein_id=WP_002886699.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4760084 4761055 . + . ID=gene-NLI98_RS23025;Name=NLI98_RS23025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23025;old_locus_tag=NLI98_23015 NZ_CP100601.1 Protein Homology CDS 4760084 4761055 . + 0 ID=cds-WP_002886691.1;Parent=gene-NLI98_RS23025;Dbxref=Genbank:WP_002886691.1;Name=WP_002886691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224748.1;locus_tag=NLI98_RS23025;product=DMT family transporter;protein_id=WP_002886691.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4761138 4761800 . + . ID=gene-NLI98_RS23030;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=NLI98_RS23030;old_locus_tag=NLI98_23020 NZ_CP100601.1 Protein Homology CDS 4761138 4761800 . + 0 ID=cds-WP_004152016.1;Parent=gene-NLI98_RS23030;Dbxref=Genbank:WP_004152016.1;Name=WP_004152016.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224747.1;locus_tag=NLI98_RS23030;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_004152016.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4761905 4763308 . - . ID=gene-NLI98_RS23035;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=NLI98_RS23035;old_locus_tag=NLI98_23025 NZ_CP100601.1 Protein Homology CDS 4761905 4763308 . - 0 ID=cds-WP_002886688.1;Parent=gene-NLI98_RS23035;Dbxref=Genbank:WP_002886688.1;Name=WP_002886688.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224746.1;locus_tag=NLI98_RS23035;product=D-serine/D-alanine/glycine transporter;protein_id=WP_002886688.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4763613 4764233 . - . ID=gene-NLI98_RS23040;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=NLI98_RS23040;old_locus_tag=NLI98_23030 NZ_CP100601.1 Protein Homology CDS 4763613 4764233 . - 0 ID=cds-WP_002886687.1;Parent=gene-NLI98_RS23040;Dbxref=Genbank:WP_002886687.1;Name=WP_002886687.1;gbkey=CDS;gene=fklB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742582.1;locus_tag=NLI98_RS23040;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_002886687.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4764452 4765126 . + . ID=gene-NLI98_RS23045;Name=NLI98_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23045;old_locus_tag=NLI98_23035 NZ_CP100601.1 Protein Homology CDS 4764452 4765126 . + 0 ID=cds-WP_088498020.1;Parent=gene-NLI98_RS23045;Dbxref=Genbank:WP_088498020.1;Name=WP_088498020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224744.1;locus_tag=NLI98_RS23045;product=hypothetical protein;protein_id=WP_088498020.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4765235 4765684 . - . ID=gene-NLI98_RS23050;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=NLI98_RS23050;old_locus_tag=NLI98_23040 NZ_CP100601.1 Protein Homology CDS 4765235 4765684 . - 0 ID=cds-WP_002886682.1;Parent=gene-NLI98_RS23050;Dbxref=Genbank:WP_002886682.1;Name=WP_002886682.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=NLI98_RS23050;product=50S ribosomal protein L9;protein_id=WP_002886682.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4765726 4765953 . - . ID=gene-NLI98_RS23055;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=NLI98_RS23055;old_locus_tag=NLI98_23045 NZ_CP100601.1 Protein Homology CDS 4765726 4765953 . - 0 ID=cds-WP_000135199.1;Parent=gene-NLI98_RS23055;Dbxref=Genbank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=NLI98_RS23055;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4765958 4766272 . - . ID=gene-NLI98_RS23060;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=NLI98_RS23060;old_locus_tag=NLI98_23050 NZ_CP100601.1 Protein Homology CDS 4765958 4766272 . - 0 ID=cds-WP_002885722.1;Parent=gene-NLI98_RS23060;Dbxref=Genbank:WP_002885722.1;Name=WP_002885722.1;Ontology_term=GO:0006269,GO:0003697;gbkey=CDS;gene=priB;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313204.1;locus_tag=NLI98_RS23060;product=primosomal replication protein N;protein_id=WP_002885722.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4766278 4766673 . - . ID=gene-NLI98_RS23065;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=NLI98_RS23065;old_locus_tag=NLI98_23055 NZ_CP100601.1 Protein Homology CDS 4766278 4766673 . - 0 ID=cds-WP_264452009.1;Parent=gene-NLI98_RS23065;Dbxref=Genbank:WP_264452009.1;Name=WP_264452009.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=NLI98_RS23065;product=30S ribosomal protein S6;protein_id=WP_264452009.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4767014 4767289 . + . ID=gene-NLI98_RS23070;Name=NLI98_RS23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23070;old_locus_tag=NLI98_23060 NZ_CP100601.1 Protein Homology CDS 4767014 4767289 . + 0 ID=cds-WP_002885689.1;Parent=gene-NLI98_RS23070;Dbxref=Genbank:WP_002885689.1;Name=WP_002885689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224740.1;locus_tag=NLI98_RS23070;product=DUF1471 domain-containing protein;protein_id=WP_002885689.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4767439 4768632 . + . ID=gene-NLI98_RS23075;Name=NLI98_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23075;old_locus_tag=NLI98_23065 NZ_CP100601.1 Protein Homology CDS 4767439 4768632 . + 0 ID=cds-WP_088498019.1;Parent=gene-NLI98_RS23075;Dbxref=Genbank:WP_088498019.1;Name=WP_088498019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224739.1;locus_tag=NLI98_RS23075;product=MFS transporter;protein_id=WP_088498019.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4768695 4769381 . - . ID=gene-NLI98_RS23080;Name=NLI98_RS23080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23080;old_locus_tag=NLI98_23070 NZ_CP100601.1 Protein Homology CDS 4768695 4769381 . - 0 ID=cds-WP_038432261.1;Parent=gene-NLI98_RS23080;Dbxref=Genbank:WP_038432261.1;Name=WP_038432261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224738.1;locus_tag=NLI98_RS23080;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_038432261.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4769381 4770235 . - . ID=gene-NLI98_RS23085;Name=NLI98_RS23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23085;old_locus_tag=NLI98_23075 NZ_CP100601.1 Protein Homology CDS 4769381 4770235 . - 0 ID=cds-WP_004210671.1;Parent=gene-NLI98_RS23085;Dbxref=Genbank:WP_004210671.1;Name=WP_004210671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224737.1;locus_tag=NLI98_RS23085;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_004210671.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4770245 4770895 . - . ID=gene-NLI98_RS23090;Name=ulaD;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=NLI98_RS23090;old_locus_tag=NLI98_23080 NZ_CP100601.1 Protein Homology CDS 4770245 4770895 . - 0 ID=cds-WP_002885684.1;Parent=gene-NLI98_RS23090;Dbxref=Genbank:WP_002885684.1;Name=WP_002885684.1;gbkey=CDS;gene=ulaD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224736.1;locus_tag=NLI98_RS23090;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_002885684.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4770909 4771376 . - . ID=gene-NLI98_RS23095;Name=ulaC;gbkey=Gene;gene=ulaC;gene_biotype=protein_coding;locus_tag=NLI98_RS23095;old_locus_tag=NLI98_23085 NZ_CP100601.1 Protein Homology CDS 4770909 4771376 . - 0 ID=cds-WP_002885683.1;Parent=gene-NLI98_RS23095;Dbxref=Genbank:WP_002885683.1;Name=WP_002885683.1;gbkey=CDS;gene=ulaC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224735.1;locus_tag=NLI98_RS23095;product=PTS ascorbate transporter subunit IIA;protein_id=WP_002885683.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4771386 4771691 . - . ID=gene-NLI98_RS23100;Name=ulaB;gbkey=Gene;gene=ulaB;gene_biotype=protein_coding;locus_tag=NLI98_RS23100;old_locus_tag=NLI98_23090 NZ_CP100601.1 Protein Homology CDS 4771386 4771691 . - 0 ID=cds-WP_002885682.1;Parent=gene-NLI98_RS23100;Dbxref=Genbank:WP_002885682.1;Name=WP_002885682.1;gbkey=CDS;gene=ulaB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_710059.2;locus_tag=NLI98_RS23100;product=PTS ascorbate transporter subunit IIB;protein_id=WP_002885682.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4771704 4773104 . - . ID=gene-NLI98_RS23105;Name=ulaA;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;locus_tag=NLI98_RS23105;old_locus_tag=NLI98_23095 NZ_CP100601.1 Protein Homology CDS 4771704 4773104 . - 0 ID=cds-WP_088498018.1;Parent=gene-NLI98_RS23105;Dbxref=Genbank:WP_088498018.1;Name=WP_088498018.1;gbkey=CDS;gene=ulaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224733.1;locus_tag=NLI98_RS23105;product=PTS ascorbate transporter subunit IIC;protein_id=WP_088498018.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4773467 4774531 . + . ID=gene-NLI98_RS23110;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=NLI98_RS23110;old_locus_tag=NLI98_23100 NZ_CP100601.1 Protein Homology CDS 4773467 4774531 . + 0 ID=cds-WP_004194176.1;Parent=gene-NLI98_RS23110;Dbxref=Genbank:WP_004194176.1;Name=WP_004194176.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003856017.1;locus_tag=NLI98_RS23110;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_004194176.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4774639 4775394 . + . ID=gene-NLI98_RS23115;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=NLI98_RS23115;old_locus_tag=NLI98_23105 NZ_CP100601.1 Protein Homology CDS 4774639 4775394 . + 0 ID=cds-WP_004177697.1;Parent=gene-NLI98_RS23115;Dbxref=Genbank:WP_004177697.1;Name=WP_004177697.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224731.1;locus_tag=NLI98_RS23115;product=HTH-type transcriptional regulator UlaR;protein_id=WP_004177697.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4775391 4776107 . - . ID=gene-NLI98_RS23120;Name=yjfP;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=NLI98_RS23120;old_locus_tag=NLI98_23110 NZ_CP100601.1 Protein Homology CDS 4775391 4776107 . - 0 ID=cds-WP_004178343.1;Parent=gene-NLI98_RS23120;Dbxref=Genbank:WP_004178343.1;Name=WP_004178343.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=yjfP;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224730.1;locus_tag=NLI98_RS23120;product=esterase;protein_id=WP_004178343.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4776317 4776625 . + . ID=gene-NLI98_RS23125;Name=bsmA;gbkey=Gene;gene=bsmA;gene_biotype=protein_coding;locus_tag=NLI98_RS23125;old_locus_tag=NLI98_23115 NZ_CP100601.1 Protein Homology CDS 4776317 4776625 . + 0 ID=cds-WP_004177699.1;Parent=gene-NLI98_RS23125;Dbxref=Genbank:WP_004177699.1;Name=WP_004177699.1;gbkey=CDS;gene=bsmA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224729.1;locus_tag=NLI98_RS23125;product=biofilm peroxide resistance protein BsmA;protein_id=WP_004177699.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4776763 4777038 . + . ID=gene-NLI98_RS23130;Name=yjfN;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=NLI98_RS23130;old_locus_tag=NLI98_23120 NZ_CP100601.1 Protein Homology CDS 4776763 4777038 . + 0 ID=cds-WP_002885673.1;Parent=gene-NLI98_RS23130;Dbxref=Genbank:WP_002885673.1;Name=WP_002885673.1;gbkey=CDS;gene=yjfN;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224728.1;locus_tag=NLI98_RS23130;product=DUF1471 family protease activator YjfN;protein_id=WP_002885673.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4777029 4778666 . - . ID=gene-NLI98_RS23135;Name=NLI98_RS23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23135;old_locus_tag=NLI98_23125 NZ_CP100601.1 Protein Homology CDS 4777029 4778666 . - 0 ID=cds-WP_004178342.1;Parent=gene-NLI98_RS23135;Dbxref=Genbank:WP_004178342.1;Name=WP_004178342.1;Ontology_term=GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224727.1;locus_tag=NLI98_RS23135;product=isovaleryl-CoA dehydrogenase;protein_id=WP_004178342.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4778792 4779523 . - . ID=gene-NLI98_RS23140;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=NLI98_RS23140;old_locus_tag=NLI98_23130 NZ_CP100601.1 Protein Homology CDS 4778792 4779523 . - 0 ID=cds-WP_002885669.1;Parent=gene-NLI98_RS23140;Dbxref=Genbank:WP_002885669.1;Name=WP_002885669.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313183.1;locus_tag=NLI98_RS23140;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_002885669.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4779605 4782037 . - . ID=gene-NLI98_RS23145;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=NLI98_RS23145;old_locus_tag=NLI98_23135 NZ_CP100601.1 Protein Homology CDS 4779605 4782037 . - 0 ID=cds-WP_002885668.1;Parent=gene-NLI98_RS23145;Dbxref=Genbank:WP_002885668.1;Name=WP_002885668.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=ribonuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224725.1;locus_tag=NLI98_RS23145;product=ribonuclease R;protein_id=WP_002885668.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4782074 4782499 . - . ID=gene-NLI98_RS23150;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=NLI98_RS23150;old_locus_tag=NLI98_23140 NZ_CP100601.1 Protein Homology CDS 4782074 4782499 . - 0 ID=cds-WP_002885667.1;Parent=gene-NLI98_RS23150;Dbxref=Genbank:WP_002885667.1;Name=WP_002885667.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134424.1;locus_tag=NLI98_RS23150;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_002885667.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4782650 4783948 . - . ID=gene-NLI98_RS23155;Name=NLI98_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23155;old_locus_tag=NLI98_23145 NZ_CP100601.1 Protein Homology CDS 4782650 4783948 . - 0 ID=cds-WP_002885665.1;Parent=gene-NLI98_RS23155;Dbxref=Genbank:WP_002885665.1;Name=WP_002885665.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=NLI98_RS23155;product=adenylosuccinate synthase;protein_id=WP_002885665.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4784051 4784248 . - . ID=gene-NLI98_RS23160;Name=NLI98_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23160;old_locus_tag=NLI98_23150 NZ_CP100601.1 Protein Homology CDS 4784051 4784248 . - 0 ID=cds-WP_002885664.1;Parent=gene-NLI98_RS23160;Dbxref=Genbank:WP_002885664.1;Name=WP_002885664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224722.1;locus_tag=NLI98_RS23160;product=DUF2065 domain-containing protein;protein_id=WP_002885664.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4784472 4784762 . + . ID=gene-NLI98_RS23165;Name=NLI98_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23165;old_locus_tag=NLI98_23155 NZ_CP100601.1 Protein Homology CDS 4784472 4784762 . + 0 ID=cds-WP_004894787.1;Parent=gene-NLI98_RS23165;Dbxref=Genbank:WP_004894787.1;Name=WP_004894787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224720.1;locus_tag=NLI98_RS23165;product=hypothetical protein;protein_id=WP_004894787.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4784845 4785849 . - . ID=gene-NLI98_RS23170;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=NLI98_RS23170;old_locus_tag=NLI98_23160 NZ_CP100601.1 Protein Homology CDS 4784845 4785849 . - 0 ID=cds-WP_002885662.1;Parent=gene-NLI98_RS23170;Dbxref=Genbank:WP_002885662.1;Name=WP_002885662.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224719.1;locus_tag=NLI98_RS23170;product=protease modulator HflC;protein_id=WP_002885662.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4785852 4787114 . - . ID=gene-NLI98_RS23175;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=NLI98_RS23175;old_locus_tag=NLI98_23165 NZ_CP100601.1 Protein Homology CDS 4785852 4787114 . - 0 ID=cds-WP_004146726.1;Parent=gene-NLI98_RS23175;Dbxref=Genbank:WP_004146726.1;Name=WP_004146726.1;Ontology_term=GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224718.1;locus_tag=NLI98_RS23175;product=FtsH protease activity modulator HflK;protein_id=WP_004146726.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4787180 4788460 . - . ID=gene-NLI98_RS23180;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=NLI98_RS23180;old_locus_tag=NLI98_23170 NZ_CP100601.1 Protein Homology CDS 4787180 4788460 . - 0 ID=cds-WP_004146725.1;Parent=gene-NLI98_RS23180;Dbxref=Genbank:WP_004146725.1;Name=WP_004146725.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224717.1;locus_tag=NLI98_RS23180;product=GTPase HflX;protein_id=WP_004146725.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4788536 4788844 . - . ID=gene-NLI98_RS23185;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=NLI98_RS23185;old_locus_tag=NLI98_23175 NZ_CP100601.1 Protein Homology CDS 4788536 4788844 . - 0 ID=cds-WP_002885659.1;Parent=gene-NLI98_RS23185;Dbxref=Genbank:WP_002885659.1;Name=WP_002885659.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224716.1;locus_tag=NLI98_RS23185;product=RNA chaperone Hfq;protein_id=WP_002885659.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4788937 4789887 . - . ID=gene-NLI98_RS23190;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=NLI98_RS23190;old_locus_tag=NLI98_23180 NZ_CP100601.1 Protein Homology CDS 4788937 4789887 . - 0 ID=cds-WP_002885652.1;Parent=gene-NLI98_RS23190;Dbxref=Genbank:WP_002885652.1;Name=WP_002885652.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014599015.1;locus_tag=NLI98_RS23190;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_002885652.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4789880 4791739 . - . ID=gene-NLI98_RS23195;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=NLI98_RS23195;old_locus_tag=NLI98_23185 NZ_CP100601.1 Protein Homology CDS 4789880 4791739 . - 0 ID=cds-WP_004178337.1;Parent=gene-NLI98_RS23195;Dbxref=Genbank:WP_004178337.1;Name=WP_004178337.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192487.1;locus_tag=NLI98_RS23195;product=DNA mismatch repair endonuclease MutL;protein_id=WP_004178337.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4791750 4793102 . - . ID=gene-NLI98_RS23200;Name=amiB;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=NLI98_RS23200;old_locus_tag=NLI98_23190 NZ_CP100601.1 Protein Homology CDS 4791750 4793102 . - 0 ID=cds-WP_004178335.1;Parent=gene-NLI98_RS23200;Dbxref=Genbank:WP_004178335.1;Name=WP_004178335.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiB;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224712.1;locus_tag=NLI98_RS23200;product=N-acetylmuramoyl-L-alanine amidase AmiB;protein_id=WP_004178335.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4793119 4793580 . - . ID=gene-NLI98_RS23205;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=NLI98_RS23205;old_locus_tag=NLI98_23195 NZ_CP100601.1 Protein Homology CDS 4793119 4793580 . - 0 ID=cds-WP_002885589.1;Parent=gene-NLI98_RS23205;Dbxref=Genbank:WP_002885589.1;Name=WP_002885589.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002885589.1;locus_tag=NLI98_RS23205;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_002885589.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4793573 4795084 . - . ID=gene-NLI98_RS23210;Name=nnr;gbkey=Gene;gene=nnr;gene_biotype=protein_coding;locus_tag=NLI98_RS23210;old_locus_tag=NLI98_23200 NZ_CP100601.1 Protein Homology CDS 4793573 4795084 . - 0 ID=cds-WP_172676858.1;Parent=gene-NLI98_RS23210;Dbxref=Genbank:WP_172676858.1;Name=WP_172676858.1;Ontology_term=GO:0052855;gbkey=CDS;gene=nnr;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224710.1;locus_tag=NLI98_RS23210;product=bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase;protein_id=WP_172676858.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4795098 4796237 . + . ID=gene-NLI98_RS23215;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=NLI98_RS23215;old_locus_tag=NLI98_23205 NZ_CP100601.1 Protein Homology CDS 4795098 4796237 . + 0 ID=cds-WP_004178333.1;Parent=gene-NLI98_RS23215;Dbxref=Genbank:WP_004178333.1;Name=WP_004178333.1;Ontology_term=GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224709.1;locus_tag=NLI98_RS23215;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_004178333.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4796508 4796583 . - . ID=gene-NLI98_RS23220;Name=NLI98_RS23220;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS23220;old_locus_tag=NLI98_23210 NZ_CP100601.1 tRNAscan-SE tRNA 4796508 4796583 . - . ID=rna-NLI98_RS23220;Parent=gene-NLI98_RS23220;anticodon=(pos:complement(4796548..4796550));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS23220;product=tRNA-Gly NZ_CP100601.1 tRNAscan-SE exon 4796508 4796583 . - . ID=exon-NLI98_RS23220-1;Parent=rna-NLI98_RS23220;anticodon=(pos:complement(4796548..4796550));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS23220;product=tRNA-Gly NZ_CP100601.1 RefSeq gene 4796656 4796731 . - . ID=gene-NLI98_RS23225;Name=NLI98_RS23225;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS23225;old_locus_tag=NLI98_23215 NZ_CP100601.1 tRNAscan-SE tRNA 4796656 4796731 . - . ID=rna-NLI98_RS23225;Parent=gene-NLI98_RS23225;anticodon=(pos:complement(4796696..4796698));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS23225;product=tRNA-Gly NZ_CP100601.1 tRNAscan-SE exon 4796656 4796731 . - . ID=exon-NLI98_RS23225-1;Parent=rna-NLI98_RS23225;anticodon=(pos:complement(4796696..4796698));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS23225;product=tRNA-Gly NZ_CP100601.1 RefSeq gene 4796800 4796875 . - . ID=gene-NLI98_RS23230;Name=NLI98_RS23230;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS23230;old_locus_tag=NLI98_23220 NZ_CP100601.1 tRNAscan-SE tRNA 4796800 4796875 . - . ID=rna-NLI98_RS23230;Parent=gene-NLI98_RS23230;anticodon=(pos:complement(4796840..4796842));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS23230;product=tRNA-Gly NZ_CP100601.1 tRNAscan-SE exon 4796800 4796875 . - . ID=exon-NLI98_RS23230-1;Parent=rna-NLI98_RS23230;anticodon=(pos:complement(4796840..4796842));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS23230;product=tRNA-Gly NZ_CP100601.1 RefSeq gene 4797170 4797901 . + . ID=gene-NLI98_RS23235;Name=NLI98_RS23235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23235;old_locus_tag=NLI98_23225 NZ_CP100601.1 Protein Homology CDS 4797170 4797901 . + 0 ID=cds-WP_004177719.1;Parent=gene-NLI98_RS23235;Dbxref=Genbank:WP_004177719.1;Name=WP_004177719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224707.1;locus_tag=NLI98_RS23235;product=transporter substrate-binding domain-containing protein;protein_id=WP_004177719.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4797945 4798490 . - . ID=gene-NLI98_RS23240;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=NLI98_RS23240;old_locus_tag=NLI98_23230 NZ_CP100601.1 Protein Homology CDS 4797945 4798490 . - 0 ID=cds-WP_002885538.1;Parent=gene-NLI98_RS23240;Dbxref=Genbank:WP_002885538.1;Name=WP_002885538.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882950.1;locus_tag=NLI98_RS23240;product=oligoribonuclease;protein_id=WP_002885538.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4798585 4799646 . + . ID=gene-NLI98_RS23245;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=NLI98_RS23245;old_locus_tag=NLI98_23235 NZ_CP100601.1 Protein Homology CDS 4798585 4799646 . + 0 ID=cds-WP_002885537.1;Parent=gene-NLI98_RS23245;Dbxref=Genbank:WP_002885537.1;Name=WP_002885537.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224705.1;locus_tag=NLI98_RS23245;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_002885537.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4799807 4800769 . + . ID=gene-NLI98_RS23250;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=NLI98_RS23250;old_locus_tag=NLI98_23240 NZ_CP100601.1 Protein Homology CDS 4799807 4800769 . + 0 ID=cds-WP_002885536.1;Parent=gene-NLI98_RS23250;Dbxref=Genbank:WP_002885536.1;Name=WP_002885536.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224704.1;locus_tag=NLI98_RS23250;product=archaetidylserine decarboxylase;protein_id=WP_002885536.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4800793 4804122 . + . ID=gene-NLI98_RS23255;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=NLI98_RS23255;old_locus_tag=NLI98_23245 NZ_CP100601.1 Protein Homology CDS 4800793 4804122 . + 0 ID=cds-WP_004146716.1;Parent=gene-NLI98_RS23255;Dbxref=Genbank:WP_004146716.1;Name=WP_004146716.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224703.1;locus_tag=NLI98_RS23255;product=miniconductance mechanosensitive channel MscM;protein_id=WP_004146716.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4804160 4805662 . - . ID=gene-NLI98_RS23260;Name=yjeM;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=NLI98_RS23260;old_locus_tag=NLI98_23250 NZ_CP100601.1 Protein Homology CDS 4804160 4805662 . - 0 ID=cds-WP_048271191.1;Parent=gene-NLI98_RS23260;Dbxref=Genbank:WP_048271191.1;Name=WP_048271191.1;Ontology_term=GO:0022857;gbkey=CDS;gene=yjeM;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224702.1;locus_tag=NLI98_RS23260;product=glutamate/gamma-aminobutyrate family transporter YjeM;protein_id=WP_048271191.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4805845 4806822 . - . ID=gene-NLI98_RS23265;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=NLI98_RS23265;old_locus_tag=NLI98_23255 NZ_CP100601.1 Protein Homology CDS 4805845 4806822 . - 0 ID=cds-WP_004146714.1;Parent=gene-NLI98_RS23265;Dbxref=Genbank:WP_004146714.1;Name=WP_004146714.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000004771.1;locus_tag=NLI98_RS23265;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_004146714.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4807098 4808888 . + . ID=gene-NLI98_RS23270;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=NLI98_RS23270;old_locus_tag=NLI98_23260 NZ_CP100601.1 Protein Homology CDS 4807098 4808888 . + 0 ID=cds-WP_088498016.1;Parent=gene-NLI98_RS23270;Dbxref=Genbank:WP_088498016.1;Name=WP_088498016.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224700.1;locus_tag=NLI98_RS23270;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_088498016.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4808881 4809615 . + . ID=gene-NLI98_RS23275;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=NLI98_RS23275;old_locus_tag=NLI98_23265 NZ_CP100601.1 Protein Homology CDS 4808881 4809615 . + 0 ID=cds-WP_004177729.1;Parent=gene-NLI98_RS23275;Dbxref=Genbank:WP_004177729.1;Name=WP_004177729.1;gbkey=CDS;gene=frdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882957.1;locus_tag=NLI98_RS23275;product=fumarate reductase iron-sulfur protein;protein_id=WP_004177729.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4809626 4810021 . + . ID=gene-NLI98_RS23280;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=NLI98_RS23280;old_locus_tag=NLI98_23270 NZ_CP100601.1 Protein Homology CDS 4809626 4810021 . + 0 ID=cds-WP_048289692.1;Parent=gene-NLI98_RS23280;Dbxref=Genbank:WP_048289692.1;Name=WP_048289692.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224698.1;locus_tag=NLI98_RS23280;product=fumarate reductase subunit FrdC;protein_id=WP_048289692.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4810032 4810391 . + . ID=gene-NLI98_RS23285;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=NLI98_RS23285;old_locus_tag=NLI98_23275 NZ_CP100601.1 Protein Homology CDS 4810032 4810391 . + 0 ID=cds-WP_002885526.1;Parent=gene-NLI98_RS23285;Dbxref=Genbank:WP_002885526.1;Name=WP_002885526.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224697.1;locus_tag=NLI98_RS23285;product=fumarate reductase subunit FrdD;protein_id=WP_002885526.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4810505 4811038 . + . ID=gene-NLI98_RS23290;Name=NLI98_RS23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23290;old_locus_tag=NLI98_23280 NZ_CP100601.1 Protein Homology CDS 4810505 4811038 . + 0 ID=cds-WP_004222047.1;Parent=gene-NLI98_RS23290;Dbxref=Genbank:WP_004222047.1;Name=WP_004222047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224696.1;locus_tag=NLI98_RS23290;product=lipocalin family protein;protein_id=WP_004222047.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4811035 4811352 . - . ID=gene-NLI98_RS23295;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=NLI98_RS23295;old_locus_tag=NLI98_23285 NZ_CP100601.1 Protein Homology CDS 4811035 4811352 . - 0 ID=cds-WP_002885521.1;Parent=gene-NLI98_RS23295;Dbxref=Genbank:WP_002885521.1;Name=WP_002885521.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224695.1;locus_tag=NLI98_RS23295;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_002885521.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4811496 4811642 . - . ID=gene-NLI98_RS23300;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=NLI98_RS23300;old_locus_tag=NLI98_23290 NZ_CP100601.1 Protein Homology CDS 4811496 4811642 . - 0 ID=cds-WP_002885518.1;Parent=gene-NLI98_RS23300;Dbxref=Genbank:WP_002885518.1;Name=WP_002885518.1;gbkey=CDS;gene=ecnB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224694.1;locus_tag=NLI98_RS23300;product=lipoprotein toxin entericidin B;protein_id=WP_002885518.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4811802 4811933 . - . ID=gene-NLI98_RS23305;Name=NLI98_RS23305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23305;old_locus_tag=NLI98_23295 NZ_CP100601.1 Protein Homology CDS 4811802 4811933 . - 0 ID=cds-WP_002885511.1;Parent=gene-NLI98_RS23305;Dbxref=Genbank:WP_002885511.1;Name=WP_002885511.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224693.1;locus_tag=NLI98_RS23305;product=entericidin A/B family lipoprotein;protein_id=WP_002885511.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4812007 4812573 . - . ID=gene-NLI98_RS23310;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=NLI98_RS23310;old_locus_tag=NLI98_23300 NZ_CP100601.1 Protein Homology CDS 4812007 4812573 . - 0 ID=cds-WP_002885506.1;Parent=gene-NLI98_RS23310;Dbxref=Genbank:WP_002885506.1;Name=WP_002885506.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=NLI98_RS23310;product=elongation factor P;protein_id=WP_002885506.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4812615 4813643 . + . ID=gene-NLI98_RS23315;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=NLI98_RS23315;old_locus_tag=NLI98_23305 NZ_CP100601.1 Protein Homology CDS 4812615 4813643 . + 0 ID=cds-WP_088498015.1;Parent=gene-NLI98_RS23315;Dbxref=Genbank:WP_088498015.1;Name=WP_088498015.1;Ontology_term=GO:0072581;gbkey=CDS;gene=epmB;go_process=protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine|0072581||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313154.1;locus_tag=NLI98_RS23315;product=EF-P beta-lysylation protein EpmB;protein_id=WP_088498015.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4813765 4814409 . - . ID=gene-NLI98_RS23320;Name=NLI98_RS23320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23320;old_locus_tag=NLI98_23310 NZ_CP100601.1 Protein Homology CDS 4813765 4814409 . - 0 ID=cds-WP_088498014.1;Parent=gene-NLI98_RS23320;Dbxref=Genbank:WP_088498014.1;Name=WP_088498014.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224690.1;locus_tag=NLI98_RS23320;product=winged helix-turn-helix domain-containing protein;protein_id=WP_088498014.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4814890 4815453 . + . ID=gene-NLI98_RS23325;Name=NLI98_RS23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23325;old_locus_tag=NLI98_23315 NZ_CP100601.1 Protein Homology CDS 4814890 4815453 . + 0 ID=cds-WP_004178325.1;Parent=gene-NLI98_RS23325;Dbxref=Genbank:WP_004178325.1;Name=WP_004178325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178325.1;locus_tag=NLI98_RS23325;product=type 1 fimbrial protein;protein_id=WP_004178325.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4815512 4816198 . + . ID=gene-NLI98_RS23330;Name=NLI98_RS23330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23330;old_locus_tag=NLI98_23320 NZ_CP100601.1 Protein Homology CDS 4815512 4816198 . + 0 ID=cds-WP_004178324.1;Parent=gene-NLI98_RS23330;Dbxref=Genbank:WP_004178324.1;Name=WP_004178324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224688.1;locus_tag=NLI98_RS23330;product=molecular chaperone;protein_id=WP_004178324.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4816234 4818768 . + . ID=gene-NLI98_RS23335;Name=NLI98_RS23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23335;old_locus_tag=NLI98_23325 NZ_CP100601.1 Protein Homology CDS 4816234 4818768 . + 0 ID=cds-WP_088498012.1;Parent=gene-NLI98_RS23335;Dbxref=Genbank:WP_088498012.1;Name=WP_088498012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020324909.1;locus_tag=NLI98_RS23335;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_088498012.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4818788 4819795 . + . ID=gene-NLI98_RS23340;Name=NLI98_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23340;old_locus_tag=NLI98_23330 NZ_CP100601.1 Protein Homology CDS 4818788 4819795 . + 0 ID=cds-WP_008807213.1;Parent=gene-NLI98_RS23340;Dbxref=Genbank:WP_008807213.1;Name=WP_008807213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807213.1;locus_tag=NLI98_RS23340;product=fimbrial protein;protein_id=WP_008807213.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4820058 4820423 . + . ID=gene-NLI98_RS23345;Name=NLI98_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23345;old_locus_tag=NLI98_23335 NZ_CP100601.1 Protein Homology CDS 4820058 4820423 . + 0 ID=cds-WP_004178321.1;Parent=gene-NLI98_RS23345;Dbxref=Genbank:WP_004178321.1;Name=WP_004178321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178321.1;locus_tag=NLI98_RS23345;product=hypothetical protein;protein_id=WP_004178321.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4820486 4821772 . + . ID=gene-NLI98_RS23350;Name=NLI98_RS23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23350;old_locus_tag=NLI98_23340 NZ_CP100601.1 Protein Homology CDS 4820486 4821772 . + 0 ID=cds-WP_004178320.1;Parent=gene-NLI98_RS23350;Dbxref=Genbank:WP_004178320.1;Name=WP_004178320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224684.1;locus_tag=NLI98_RS23350;product=HlyD family secretion protein;protein_id=WP_004178320.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4821765 4823888 . + . ID=gene-NLI98_RS23355;Name=NLI98_RS23355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23355;old_locus_tag=NLI98_23345 NZ_CP100601.1 Protein Homology CDS 4821765 4823888 . + 0 ID=cds-WP_088498011.1;Parent=gene-NLI98_RS23355;Dbxref=Genbank:WP_088498011.1;Name=WP_088498011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224683.1;locus_tag=NLI98_RS23355;product=peptidase domain-containing ABC transporter;protein_id=WP_088498011.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4823902 4824765 . + . ID=gene-NLI98_RS23360;Name=NLI98_RS23360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23360;old_locus_tag=NLI98_23350 NZ_CP100601.1 Protein Homology CDS 4823902 4824765 . + 0 ID=cds-WP_088498010.1;Parent=gene-NLI98_RS23360;Dbxref=Genbank:WP_088498010.1;Name=WP_088498010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807217.1;locus_tag=NLI98_RS23360;product=YjeJ family protein;protein_id=WP_088498010.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4824820 4825173 . - . ID=gene-NLI98_RS23365;Name=NLI98_RS23365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23365;old_locus_tag=NLI98_23355 NZ_CP100601.1 Protein Homology CDS 4824820 4825173 . - 0 ID=cds-WP_004152419.1;Parent=gene-NLI98_RS23365;Dbxref=Genbank:WP_004152419.1;Name=WP_004152419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224681.1;locus_tag=NLI98_RS23365;product=DUF4156 domain-containing protein;protein_id=WP_004152419.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4825434 4827080 . - . ID=gene-NLI98_RS23370;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=NLI98_RS23370;old_locus_tag=NLI98_23360 NZ_CP100601.1 Protein Homology CDS 4825434 4827080 . - 0 ID=cds-WP_016946619.1;Parent=gene-NLI98_RS23370;Dbxref=Genbank:WP_016946619.1;Name=WP_016946619.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=NLI98_RS23370;product=chaperonin GroEL;protein_id=WP_016946619.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4827118 4827411 . - . ID=gene-NLI98_RS23375;Name=NLI98_RS23375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23375;old_locus_tag=NLI98_23365 NZ_CP100601.1 Protein Homology CDS 4827118 4827411 . - 0 ID=cds-WP_004152420.1;Parent=gene-NLI98_RS23375;Dbxref=Genbank:WP_004152420.1;Name=WP_004152420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=NLI98_RS23375;product=co-chaperone GroES;protein_id=WP_004152420.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4827644 4828894 . + . ID=gene-NLI98_RS23380;Name=yjeH;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=NLI98_RS23380;old_locus_tag=NLI98_23370 NZ_CP100601.1 Protein Homology CDS 4827644 4828894 . + 0 ID=cds-WP_009485424.1;Parent=gene-NLI98_RS23380;Dbxref=Genbank:WP_009485424.1;Name=WP_009485424.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=yjeH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224677.1;locus_tag=NLI98_RS23380;product=L-methionine/branched-chain amino acid transporter;protein_id=WP_009485424.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4828945 4829421 . - . ID=gene-NLI98_RS23385;Name=fxsA;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=NLI98_RS23385;old_locus_tag=NLI98_23375 NZ_CP100601.1 Protein Homology CDS 4828945 4829421 . - 0 ID=cds-WP_002885425.1;Parent=gene-NLI98_RS23385;Dbxref=Genbank:WP_002885425.1;Name=WP_002885425.1;gbkey=CDS;gene=fxsA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224676.1;locus_tag=NLI98_RS23385;product=membrane protein FxsA;protein_id=WP_002885425.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4829759 4831195 . + . ID=gene-NLI98_RS23390;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=NLI98_RS23390;old_locus_tag=NLI98_23380 NZ_CP100601.1 Protein Homology CDS 4829759 4831195 . + 0 ID=cds-WP_002885424.1;Parent=gene-NLI98_RS23390;Dbxref=Genbank:WP_002885424.1;Name=WP_002885424.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224674.1;locus_tag=NLI98_RS23390;product=aspartate ammonia-lyase;protein_id=WP_002885424.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4831311 4832612 . + . ID=gene-NLI98_RS23395;Name=NLI98_RS23395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23395;old_locus_tag=NLI98_23385 NZ_CP100601.1 Protein Homology CDS 4831311 4832612 . + 0 ID=cds-WP_002885423.1;Parent=gene-NLI98_RS23395;Dbxref=Genbank:WP_002885423.1;Name=WP_002885423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224673.1;locus_tag=NLI98_RS23395;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_002885423.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4832737 4833060 . + . ID=gene-NLI98_RS23400;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=NLI98_RS23400;old_locus_tag=NLI98_23390 NZ_CP100601.1 Protein Homology CDS 4832737 4833060 . + 0 ID=cds-WP_002885422.1;Parent=gene-NLI98_RS23400;Dbxref=Genbank:WP_002885422.1;Name=WP_002885422.1;gbkey=CDS;gene=cutA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224672.1;locus_tag=NLI98_RS23400;product=divalent cation tolerance protein CutA;protein_id=WP_002885422.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4833036 4834832 . + . ID=gene-NLI98_RS23405;Name=NLI98_RS23405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23405;old_locus_tag=NLI98_23395 NZ_CP100601.1 Protein Homology CDS 4833036 4834832 . + 0 ID=cds-WP_048990574.1;Parent=gene-NLI98_RS23405;Dbxref=Genbank:WP_048990574.1;Name=WP_048990574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224671.1;locus_tag=NLI98_RS23405;product=protein-disulfide reductase DsbD;protein_id=WP_048990574.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4834853 4835443 . + . ID=gene-NLI98_RS23410;Name=NLI98_RS23410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23410;old_locus_tag=NLI98_23400 NZ_CP100601.1 Protein Homology CDS 4834853 4835443 . + 0 ID=cds-WP_002885410.1;Parent=gene-NLI98_RS23410;Dbxref=Genbank:WP_002885410.1;Name=WP_002885410.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224670.1;locus_tag=NLI98_RS23410;product=transcriptional regulator;protein_id=WP_002885410.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4835511 4837598 . + . ID=gene-NLI98_RS23415;Name=NLI98_RS23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23415;old_locus_tag=NLI98_23405 NZ_CP100601.1 Protein Homology CDS 4835511 4837598 . + 0 ID=cds-WP_088498009.1;Parent=gene-NLI98_RS23415;Dbxref=Genbank:WP_088498009.1;Name=WP_088498009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224669.1;locus_tag=NLI98_RS23415;product=DUF1176 domain-containing protein;protein_id=WP_088498009.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4837714 4837789 . + . ID=gene-NLI98_RS23420;Name=NLI98_RS23420;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS23420;old_locus_tag=NLI98_23410 NZ_CP100601.1 tRNAscan-SE tRNA 4837714 4837789 . + . ID=rna-NLI98_RS23420;Parent=gene-NLI98_RS23420;anticodon=(pos:4837747..4837749);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS23420;product=tRNA-Phe NZ_CP100601.1 tRNAscan-SE exon 4837714 4837789 . + . ID=exon-NLI98_RS23420-1;Parent=rna-NLI98_RS23420;anticodon=(pos:4837747..4837749);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS23420;product=tRNA-Phe NZ_CP100601.1 RefSeq gene 4838502 4838792 . - . ID=gene-NLI98_RS23425;Name=NLI98_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23425;old_locus_tag=NLI98_23415 NZ_CP100601.1 Protein Homology CDS 4838502 4838792 . - 0 ID=cds-WP_004153693.1;Parent=gene-NLI98_RS23425;Dbxref=Genbank:WP_004153693.1;Name=WP_004153693.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017845.2;locus_tag=NLI98_RS23425;product=PerC family transcriptional regulator;protein_id=WP_004153693.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4838987 4839109 . + . ID=gene-NLI98_RS23430;Name=NLI98_RS23430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23430;old_locus_tag=NLI98_23420 NZ_CP100601.1 Protein Homology CDS 4838987 4839109 . + 0 ID=cds-WP_004146686.1;Parent=gene-NLI98_RS23430;Dbxref=Genbank:WP_004146686.1;Name=WP_004146686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224666.1;locus_tag=NLI98_RS23430;product=hypothetical protein;protein_id=WP_004146686.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4839104 4839670 . - . ID=gene-NLI98_RS23435;Name=NLI98_RS23435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23435;old_locus_tag=NLI98_23425 NZ_CP100601.1 Protein Homology CDS 4839104 4839670 . - 0 ID=cds-WP_002885396.1;Parent=gene-NLI98_RS23435;Dbxref=Genbank:WP_002885396.1;Name=WP_002885396.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224665.1;locus_tag=NLI98_RS23435;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_002885396.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4840304 4842751 . + . ID=gene-NLI98_RS23440;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=protein_coding;locus_tag=NLI98_RS23440;old_locus_tag=NLI98_23430 NZ_CP100601.1 Protein Homology CDS 4840304 4842751 . + 0 ID=cds-WP_167875542.1;Parent=gene-NLI98_RS23440;Dbxref=Genbank:WP_167875542.1;Name=WP_167875542.1;Ontology_term=GO:1901515;gbkey=CDS;gene=pgaA;go_function=poly-beta-1%2C6-N-acetyl-D-glucosamine transmembrane transporter activity|1901515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224664.1;locus_tag=NLI98_RS23440;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;protein_id=WP_167875542.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4842760 4844775 . + . ID=gene-NLI98_RS23445;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=NLI98_RS23445;old_locus_tag=NLI98_23435 NZ_CP100601.1 Protein Homology CDS 4842760 4844775 . + 0 ID=cds-WP_088498013.1;Parent=gene-NLI98_RS23445;Dbxref=Genbank:WP_088498013.1;Name=WP_088498013.1;gbkey=CDS;gene=pgaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224663.1;locus_tag=NLI98_RS23445;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;protein_id=WP_088498013.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4844768 4846096 . + . ID=gene-NLI98_RS23450;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=NLI98_RS23450;old_locus_tag=NLI98_23440 NZ_CP100601.1 Protein Homology CDS 4844768 4846096 . + 0 ID=cds-WP_002885393.1;Parent=gene-NLI98_RS23450;Dbxref=Genbank:WP_002885393.1;Name=WP_002885393.1;Ontology_term=GO:0042710,GO:0008375;gbkey=CDS;gene=pgaC;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224662.1;locus_tag=NLI98_RS23450;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=WP_002885393.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4846096 4846545 . + . ID=gene-NLI98_RS23455;Name=pgaD;gbkey=Gene;gene=pgaD;gene_biotype=protein_coding;locus_tag=NLI98_RS23455;old_locus_tag=NLI98_23445 NZ_CP100601.1 Protein Homology CDS 4846096 4846545 . + 0 ID=cds-WP_004177775.1;Parent=gene-NLI98_RS23455;Dbxref=Genbank:WP_004177775.1;Name=WP_004177775.1;gbkey=CDS;gene=pgaD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224661.1;locus_tag=NLI98_RS23455;product=poly-beta-1%2C6-N-acetyl-D-glucosamine biosynthesis protein PgaD;protein_id=WP_004177775.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4846591 4847376 . - . ID=gene-NLI98_RS23460;Name=NLI98_RS23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23460;old_locus_tag=NLI98_23450 NZ_CP100601.1 Protein Homology CDS 4846591 4847376 . - 0 ID=cds-WP_004872838.1;Parent=gene-NLI98_RS23460;Dbxref=Genbank:WP_004872838.1;Name=WP_004872838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224660.1;locus_tag=NLI98_RS23460;product=DsbA family protein;protein_id=WP_004872838.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4847602 4848285 . + . ID=gene-NLI98_RS23465;Name=NLI98_RS23465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23465;old_locus_tag=NLI98_23455 NZ_CP100601.1 Protein Homology CDS 4847602 4848285 . + 0 ID=cds-WP_004221988.1;Parent=gene-NLI98_RS23465;Dbxref=Genbank:WP_004221988.1;Name=WP_004221988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224658.1;locus_tag=NLI98_RS23465;product=TerC family protein;protein_id=WP_004221988.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4848242 4848355 . - . ID=gene-NLI98_RS23470;Name=NLI98_RS23470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23470;old_locus_tag=NLI98_23460 NZ_CP100601.1 Protein Homology CDS 4848242 4848355 . - 0 ID=cds-WP_020316611.1;Parent=gene-NLI98_RS23470;Dbxref=Genbank:WP_020316611.1;Name=WP_020316611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224657.1;locus_tag=NLI98_RS23470;product=hypothetical protein;protein_id=WP_020316611.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4848431 4849348 . + . ID=gene-NLI98_RS23475;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=NLI98_RS23475;old_locus_tag=NLI98_23465 NZ_CP100601.1 Protein Homology CDS 4848431 4849348 . + 0 ID=cds-WP_002885338.1;Parent=gene-NLI98_RS23475;Dbxref=Genbank:WP_002885338.1;Name=WP_002885338.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224656.1;locus_tag=NLI98_RS23475;product=curved DNA-binding protein;protein_id=WP_002885338.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4849348 4849653 . + . ID=gene-NLI98_RS23480;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=NLI98_RS23480;old_locus_tag=NLI98_23470 NZ_CP100601.1 Protein Homology CDS 4849348 4849653 . + 0 ID=cds-WP_002885324.1;Parent=gene-NLI98_RS23480;Dbxref=Genbank:WP_002885324.1;Name=WP_002885324.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224655.1;locus_tag=NLI98_RS23480;product=chaperone modulator CbpM;protein_id=WP_002885324.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4850027 4850398 . - . ID=gene-NLI98_RS23485;Name=NLI98_RS23485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23485;old_locus_tag=NLI98_23475 NZ_CP100601.1 Protein Homology CDS 4850027 4850398 . - 0 ID=cds-WP_004186571.1;Parent=gene-NLI98_RS23485;Dbxref=Genbank:WP_004186571.1;Name=WP_004186571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224652.1;locus_tag=NLI98_RS23485;product=plasmid stabilization protein;protein_id=WP_004186571.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4850408 4851364 . - . ID=gene-NLI98_RS23490;Name=NLI98_RS23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23490;old_locus_tag=NLI98_23480 NZ_CP100601.1 Protein Homology CDS 4850408 4851364 . - 0 ID=cds-WP_004146678.1;Parent=gene-NLI98_RS23490;Dbxref=Genbank:WP_004146678.1;Name=WP_004146678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224651.1;locus_tag=NLI98_RS23490;product=plasmid segregation protein ParM;protein_id=WP_004146678.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4851512 4851634 . - . ID=gene-NLI98_RS23495;Name=NLI98_RS23495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23495;old_locus_tag=NLI98_23485 NZ_CP100601.1 Protein Homology CDS 4851512 4851634 . - 0 ID=cds-WP_004146677.1;Parent=gene-NLI98_RS23495;Dbxref=Genbank:WP_004146677.1;Name=WP_004146677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224650.1;locus_tag=NLI98_RS23495;product=hypothetical protein;protein_id=WP_004146677.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4851640 4853055 . - . ID=gene-NLI98_RS23500;Name=melB;gbkey=Gene;gene=melB;gene_biotype=protein_coding;locus_tag=NLI98_RS23500;old_locus_tag=NLI98_23490 NZ_CP100601.1 Protein Homology CDS 4851640 4853055 . - 0 ID=cds-WP_016831375.1;Parent=gene-NLI98_RS23500;Dbxref=Genbank:WP_016831375.1;Name=WP_016831375.1;Ontology_term=GO:0006814,GO:0008643,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;gene=melB;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=sodium ion transport|0006814||IEA,carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224649.1;locus_tag=NLI98_RS23500;product=melibiose:sodium transporter MelB;protein_id=WP_016831375.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4853149 4854501 . - . ID=gene-NLI98_RS23505;Name=NLI98_RS23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23505;old_locus_tag=NLI98_23495 NZ_CP100601.1 Protein Homology CDS 4853149 4854501 . - 0 ID=cds-WP_004146675.1;Parent=gene-NLI98_RS23505;Dbxref=Genbank:WP_004146675.1;Name=WP_004146675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224648.1;locus_tag=NLI98_RS23505;product=alpha-glucosidase/alpha-galactosidase;protein_id=WP_004146675.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4854741 4855679 . + . ID=gene-NLI98_RS23510;Name=melR;gbkey=Gene;gene=melR;gene_biotype=protein_coding;locus_tag=NLI98_RS23510;old_locus_tag=NLI98_23500 NZ_CP100601.1 Protein Homology CDS 4854741 4855679 . + 0 ID=cds-WP_004177781.1;Parent=gene-NLI98_RS23510;Dbxref=Genbank:WP_004177781.1;Name=WP_004177781.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=melR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224647.1;locus_tag=NLI98_RS23510;product=transcriptional regulator MelR;protein_id=WP_004177781.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4855729 4857231 . - . ID=gene-NLI98_RS23515;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=NLI98_RS23515;old_locus_tag=NLI98_23505 NZ_CP100601.1 Protein Homology CDS 4855729 4857231 . - 0 ID=cds-WP_002885227.1;Parent=gene-NLI98_RS23515;Dbxref=Genbank:WP_002885227.1;Name=WP_002885227.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224646.1;locus_tag=NLI98_RS23515;product=glycine betaine/L-proline transporter ProP;protein_id=WP_002885227.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4857776 4858111 . + . ID=gene-NLI98_RS23520;Name=NLI98_RS23520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23520;old_locus_tag=NLI98_23510 NZ_CP100601.1 Protein Homology CDS 4857776 4858111 . + 0 ID=cds-WP_004177783.1;Parent=gene-NLI98_RS23520;Dbxref=Genbank:WP_004177783.1;Name=WP_004177783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313117.1;locus_tag=NLI98_RS23520;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_004177783.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4858340 4858774 . + . ID=gene-NLI98_RS23525;Name=yjdN;gbkey=Gene;gene=yjdN;gene_biotype=protein_coding;locus_tag=NLI98_RS23525;old_locus_tag=NLI98_23515 NZ_CP100601.1 Protein Homology CDS 4858340 4858774 . + 0 ID=cds-WP_002885221.1;Parent=gene-NLI98_RS23525;Dbxref=Genbank:WP_002885221.1;Name=WP_002885221.1;gbkey=CDS;gene=yjdN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206380.1;locus_tag=NLI98_RS23525;product=VOC family metalloprotein YjdN;protein_id=WP_002885221.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4858930 4859655 . + . ID=gene-NLI98_RS23530;Name=phnF;gbkey=Gene;gene=phnF;gene_biotype=protein_coding;locus_tag=NLI98_RS23530;old_locus_tag=NLI98_23520 NZ_CP100601.1 Protein Homology CDS 4858930 4859655 . + 0 ID=cds-WP_088498008.1;Parent=gene-NLI98_RS23530;Dbxref=Genbank:WP_088498008.1;Name=WP_088498008.1;gbkey=CDS;gene=phnF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224643.1;locus_tag=NLI98_RS23530;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=WP_088498008.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4859656 4860108 . + . ID=gene-NLI98_RS23535;Name=phnG;gbkey=Gene;gene=phnG;gene_biotype=protein_coding;locus_tag=NLI98_RS23535;old_locus_tag=NLI98_23525 NZ_CP100601.1 Protein Homology CDS 4859656 4860108 . + 0 ID=cds-WP_004210036.1;Parent=gene-NLI98_RS23535;Dbxref=Genbank:WP_004210036.1;Name=WP_004210036.1;Ontology_term=GO:0015716,GO:0019634;gbkey=CDS;gene=phnG;go_process=organic phosphonate transport|0015716||IEA,organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004137441.1;locus_tag=NLI98_RS23535;product=phosphonate C-P lyase system protein PhnG;protein_id=WP_004210036.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4860105 4860689 . + . ID=gene-NLI98_RS23540;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=NLI98_RS23540;old_locus_tag=NLI98_23530 NZ_CP100601.1 Protein Homology CDS 4860105 4860689 . + 0 ID=cds-WP_002885207.1;Parent=gene-NLI98_RS23540;Dbxref=Genbank:WP_002885207.1;Name=WP_002885207.1;Ontology_term=GO:0019634;gbkey=CDS;gene=phnH;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224641.1;locus_tag=NLI98_RS23540;product=phosphonate C-P lyase system protein PhnH;protein_id=WP_002885207.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4860690 4861754 . + . ID=gene-NLI98_RS23545;Name=NLI98_RS23545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23545;old_locus_tag=NLI98_23535 NZ_CP100601.1 Protein Homology CDS 4860690 4861754 . + 0 ID=cds-WP_004177786.1;Parent=gene-NLI98_RS23545;Dbxref=Genbank:WP_004177786.1;Name=WP_004177786.1;Ontology_term=GO:0019634;gbkey=CDS;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224640.1;locus_tag=NLI98_RS23545;product=carbon-phosphorus lyase complex subunit PhnI;protein_id=WP_004177786.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4861747 4862595 . + . ID=gene-NLI98_RS23550;Name=NLI98_RS23550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23550;old_locus_tag=NLI98_23540 NZ_CP100601.1 Protein Homology CDS 4861747 4862595 . + 0 ID=cds-WP_002885202.1;Parent=gene-NLI98_RS23550;Dbxref=Genbank:WP_002885202.1;Name=WP_002885202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224639.1;locus_tag=NLI98_RS23550;product=alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ;protein_id=WP_002885202.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4862592 4863350 . + . ID=gene-NLI98_RS23555;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=NLI98_RS23555;old_locus_tag=NLI98_23545 NZ_CP100601.1 Protein Homology CDS 4862592 4863350 . + 0 ID=cds-WP_004178305.1;Parent=gene-NLI98_RS23555;Dbxref=Genbank:WP_004178305.1;Name=WP_004178305.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnK;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224638.1;locus_tag=NLI98_RS23555;product=phosphonate C-P lyase system protein PhnK;protein_id=WP_004178305.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4863458 4864138 . + . ID=gene-NLI98_RS23560;Name=phnL;gbkey=Gene;gene=phnL;gene_biotype=protein_coding;locus_tag=NLI98_RS23560;old_locus_tag=NLI98_23550 NZ_CP100601.1 Protein Homology CDS 4863458 4864138 . + 0 ID=cds-WP_002885196.1;Parent=gene-NLI98_RS23560;Dbxref=Genbank:WP_002885196.1;Name=WP_002885196.1;Ontology_term=GO:0019634,GO:0018835;gbkey=CDS;gene=phnL;go_function=carbon phosphorus lyase activity|0018835||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224637.1;locus_tag=NLI98_RS23560;product=phosphonate C-P lyase system protein PhnL;protein_id=WP_002885196.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4864135 4865271 . + . ID=gene-NLI98_RS23565;Name=phnM;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;locus_tag=NLI98_RS23565;old_locus_tag=NLI98_23555 NZ_CP100601.1 Protein Homology CDS 4864135 4865271 . + 0 ID=cds-WP_088498007.1;Parent=gene-NLI98_RS23565;Dbxref=Genbank:WP_088498007.1;Name=WP_088498007.1;Ontology_term=GO:0019700,GO:0016810;gbkey=CDS;gene=phnM;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224636.1;locus_tag=NLI98_RS23565;product=alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase;protein_id=WP_088498007.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4865271 4865834 . + . ID=gene-NLI98_RS23570;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=NLI98_RS23570;old_locus_tag=NLI98_23560 NZ_CP100601.1 Protein Homology CDS 4865271 4865834 . + 0 ID=cds-WP_004151727.1;Parent=gene-NLI98_RS23570;Dbxref=Genbank:WP_004151727.1;Name=WP_004151727.1;Ontology_term=GO:0006015,GO:0033863;gbkey=CDS;gene=phnN;go_function=ribose 1%2C5-bisphosphate phosphokinase activity|0033863||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224635.1;locus_tag=NLI98_RS23570;product=ribose 1%2C5-bisphosphokinase;protein_id=WP_004151727.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4865850 4866608 . + . ID=gene-NLI98_RS23575;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=NLI98_RS23575;old_locus_tag=NLI98_23565 NZ_CP100601.1 Protein Homology CDS 4865850 4866608 . + 0 ID=cds-WP_009309407.1;Parent=gene-NLI98_RS23575;Dbxref=Genbank:WP_009309407.1;Name=WP_009309407.1;Ontology_term=GO:0019700,GO:0008081;gbkey=CDS;gene=phnP;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224634.1;locus_tag=NLI98_RS23575;product=phosphonate metabolism protein PhnP;protein_id=WP_009309407.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4866630 4866983 . - . ID=gene-NLI98_RS23580;Name=NLI98_RS23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23580;old_locus_tag=NLI98_23570 NZ_CP100601.1 Protein Homology CDS 4866630 4866983 . - 0 ID=cds-WP_032428474.1;Parent=gene-NLI98_RS23580;Dbxref=Genbank:WP_032428474.1;Name=WP_032428474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224633.1;locus_tag=NLI98_RS23580;product=membrane protein;protein_id=WP_032428474.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4867054 4869339 . - . ID=gene-NLI98_RS23585;Name=NLI98_RS23585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23585;old_locus_tag=NLI98_23575 NZ_CP100601.1 Protein Homology CDS 4867054 4869339 . - 0 ID=cds-WP_088498006.1;Parent=gene-NLI98_RS23585;Dbxref=Genbank:WP_088498006.1;Name=WP_088498006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224632.1;locus_tag=NLI98_RS23585;product=ATP-binding protein;protein_id=WP_088498006.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4869519 4871039 . + . ID=gene-NLI98_RS23590;Name=NLI98_RS23590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23590;old_locus_tag=NLI98_23580 NZ_CP100601.1 Protein Homology CDS 4869519 4871039 . + 0 ID=cds-WP_004210021.1;Parent=gene-NLI98_RS23590;Dbxref=Genbank:WP_004210021.1;Name=WP_004210021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224631.1;locus_tag=NLI98_RS23590;product=sugar ABC transporter ATP-binding protein;protein_id=WP_004210021.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4871036 4872034 . + . ID=gene-NLI98_RS23595;Name=NLI98_RS23595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23595;old_locus_tag=NLI98_23585 NZ_CP100601.1 Protein Homology CDS 4871036 4872034 . + 0 ID=cds-WP_002885172.1;Parent=gene-NLI98_RS23595;Dbxref=Genbank:WP_002885172.1;Name=WP_002885172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224630.1;locus_tag=NLI98_RS23595;product=ribose ABC transporter permease;protein_id=WP_002885172.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4872065 4873006 . + . ID=gene-NLI98_RS23600;Name=NLI98_RS23600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23600;old_locus_tag=NLI98_23590 NZ_CP100601.1 Protein Homology CDS 4872065 4873006 . + 0 ID=cds-WP_002885156.1;Parent=gene-NLI98_RS23600;Dbxref=Genbank:WP_002885156.1;Name=WP_002885156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224629.1;locus_tag=NLI98_RS23600;product=ABC transporter substrate-binding protein;protein_id=WP_002885156.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4873081 4874043 . + . ID=gene-NLI98_RS23605;Name=NLI98_RS23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23605;old_locus_tag=NLI98_23595 NZ_CP100601.1 Protein Homology CDS 4873081 4874043 . + 0 ID=cds-WP_088498005.1;Parent=gene-NLI98_RS23605;Dbxref=Genbank:WP_088498005.1;Name=WP_088498005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020316612.1;locus_tag=NLI98_RS23605;product=PfkB family carbohydrate kinase;protein_id=WP_088498005.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4874168 4875085 . - . ID=gene-NLI98_RS23610;Name=NLI98_RS23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23610;old_locus_tag=NLI98_23600 NZ_CP100601.1 Protein Homology CDS 4874168 4875085 . - 0 ID=cds-WP_019704723.1;Parent=gene-NLI98_RS23610;Dbxref=Genbank:WP_019704723.1;Name=WP_019704723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224627.1;locus_tag=NLI98_RS23610;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_019704723.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4875091 4875849 . - . ID=gene-NLI98_RS23615;Name=NLI98_RS23615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23615;old_locus_tag=NLI98_23605 NZ_CP100601.1 Protein Homology CDS 4875091 4875849 . - 0 ID=cds-WP_004192584.1;Parent=gene-NLI98_RS23615;Dbxref=Genbank:WP_004192584.1;Name=WP_004192584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224626.1;locus_tag=NLI98_RS23615;product=type IV toxin-antitoxin system AbiEi family antitoxin;protein_id=WP_004192584.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4875935 4876663 . - . ID=gene-NLI98_RS23620;Name=NLI98_RS23620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23620;old_locus_tag=NLI98_23610 NZ_CP100601.1 Protein Homology CDS 4875935 4876663 . - 0 ID=cds-WP_002885152.1;Parent=gene-NLI98_RS23620;Dbxref=Genbank:WP_002885152.1;Name=WP_002885152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224625.1;locus_tag=NLI98_RS23620;product=response regulator transcription factor;protein_id=WP_002885152.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4876936 4879083 . + . ID=gene-NLI98_RS23625;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=NLI98_RS23625;old_locus_tag=NLI98_23615 NZ_CP100601.1 Protein Homology CDS 4876936 4879083 . + 0 ID=cds-WP_077598981.1;Parent=gene-NLI98_RS23625;Dbxref=Genbank:WP_077598981.1;Name=WP_077598981.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463150.1;locus_tag=NLI98_RS23625;product=formate dehydrogenase subunit alpha;protein_id=WP_077598981.1;transl_except=(pos:4877353..4877355%2Caa:Sec);transl_table=11 NZ_CP100601.1 RefSeq gene 4879313 4879999 . + . ID=gene-NLI98_RS23630;Name=NLI98_RS23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23630;old_locus_tag=NLI98_23620 NZ_CP100601.1 Protein Homology CDS 4879313 4879999 . + 0 ID=cds-WP_004151733.1;Parent=gene-NLI98_RS23630;Dbxref=Genbank:WP_004151733.1;Name=WP_004151733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224621.1;locus_tag=NLI98_RS23630;product=sel1 repeat family protein;protein_id=WP_004151733.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4880036 4881349 . - . ID=gene-NLI98_RS23635;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=NLI98_RS23635;old_locus_tag=NLI98_23625 NZ_CP100601.1 Protein Homology CDS 4880036 4881349 . - 0 ID=cds-WP_004146659.1;Parent=gene-NLI98_RS23635;Dbxref=Genbank:WP_004146659.1;Name=WP_004146659.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=gltP;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224620.1;locus_tag=NLI98_RS23635;product=glutamate/aspartate:proton symporter GltP;protein_id=WP_004146659.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4881461 4881661 . - . ID=gene-NLI98_RS23640;Name=NLI98_RS23640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23640;old_locus_tag=NLI98_23630 NZ_CP100601.1 Protein Homology CDS 4881461 4881661 . - 0 ID=cds-WP_004226113.1;Parent=gene-NLI98_RS23640;Dbxref=Genbank:WP_004226113.1;Name=WP_004226113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224619.1;locus_tag=NLI98_RS23640;product=hypothetical protein;protein_id=WP_004226113.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4881762 4883720 . + . ID=gene-NLI98_RS23645;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=NLI98_RS23645;old_locus_tag=NLI98_23635 NZ_CP100601.1 Protein Homology CDS 4881762 4883720 . + 0 ID=cds-WP_064151330.1;Parent=gene-NLI98_RS23645;Dbxref=Genbank:WP_064151330.1;Name=WP_064151330.1;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224618.1;locus_tag=NLI98_RS23645;product=acetate--CoA ligase;protein_id=WP_064151330.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4883904 4884215 . + . ID=gene-NLI98_RS23650;Name=NLI98_RS23650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23650;old_locus_tag=NLI98_23640 NZ_CP100601.1 Protein Homology CDS 4883904 4884215 . + 0 ID=cds-WP_004177812.1;Parent=gene-NLI98_RS23650;Dbxref=Genbank:WP_004177812.1;Name=WP_004177812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224617.1;locus_tag=NLI98_RS23650;product=DUF485 domain-containing protein;protein_id=WP_004177812.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4884215 4885867 . + . ID=gene-NLI98_RS23655;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=NLI98_RS23655;old_locus_tag=NLI98_23645 NZ_CP100601.1 Protein Homology CDS 4884215 4885867 . + 0 ID=cds-WP_024623073.1;Parent=gene-NLI98_RS23655;Dbxref=Genbank:WP_024623073.1;Name=WP_024623073.1;Ontology_term=GO:0006814,GO:0015370,GO:0031402,GO:0005886;gbkey=CDS;gene=actP;go_component=plasma membrane|0005886||IEA;go_function=solute:sodium symporter activity|0015370||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463138.1;locus_tag=NLI98_RS23655;product=cation/acetate symporter ActP;protein_id=WP_024623073.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4885914 4887011 . - . ID=gene-NLI98_RS23660;Name=NLI98_RS23660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23660;old_locus_tag=NLI98_23650 NZ_CP100601.1 Protein Homology CDS 4885914 4887011 . - 0 ID=cds-WP_004178296.1;Parent=gene-NLI98_RS23660;Dbxref=Genbank:WP_004178296.1;Name=WP_004178296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224615.1;locus_tag=NLI98_RS23660;product=type 1 fimbrial protein;protein_id=WP_004178296.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4887031 4887582 . - . ID=gene-NLI98_RS23665;Name=NLI98_RS23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23665;old_locus_tag=NLI98_23655 NZ_CP100601.1 Protein Homology CDS 4887031 4887582 . - 0 ID=cds-WP_048337967.1;Parent=gene-NLI98_RS23665;Dbxref=Genbank:WP_048337967.1;Name=WP_048337967.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004151734.1;locus_tag=NLI98_RS23665;product=fimbrial protein;protein_id=WP_048337967.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4887618 4890197 . - . ID=gene-NLI98_RS23670;Name=NLI98_RS23670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23670;old_locus_tag=NLI98_23660 NZ_CP100601.1 Protein Homology CDS 4887618 4890197 . - 0 ID=cds-WP_023284475.1;Parent=gene-NLI98_RS23670;Dbxref=Genbank:WP_023284475.1;Name=WP_023284475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004178294.1;locus_tag=NLI98_RS23670;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_023284475.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4890151 4890840 . - . ID=gene-NLI98_RS23675;Name=NLI98_RS23675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23675;old_locus_tag=NLI98_23665 NZ_CP100601.1 Protein Homology CDS 4890151 4890840 . - 0 ID=cds-WP_064162138.1;Parent=gene-NLI98_RS23675;Dbxref=Genbank:WP_064162138.1;Name=WP_064162138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224612.1;locus_tag=NLI98_RS23675;product=fimbrial assembly chaperone;protein_id=WP_064162138.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4890901 4891458 . - . ID=gene-NLI98_RS23680;Name=NLI98_RS23680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23680;old_locus_tag=NLI98_23670 NZ_CP100601.1 Protein Homology CDS 4890901 4891458 . - 0 ID=cds-WP_004192602.1;Parent=gene-NLI98_RS23680;Dbxref=Genbank:WP_004192602.1;Name=WP_004192602.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224611.1;locus_tag=NLI98_RS23680;product=fimbrial protein;protein_id=WP_004192602.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4891969 4892658 . - . ID=gene-NLI98_RS23685;Name=NLI98_RS23685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23685;old_locus_tag=NLI98_23675 NZ_CP100601.1 Protein Homology CDS 4891969 4892658 . - 0 ID=cds-WP_002885088.1;Parent=gene-NLI98_RS23685;Dbxref=Genbank:WP_002885088.1;Name=WP_002885088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224609.1;locus_tag=NLI98_RS23685;product=LrgB family protein;protein_id=WP_002885088.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4892655 4893062 . - . ID=gene-NLI98_RS23690;Name=NLI98_RS23690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23690;old_locus_tag=NLI98_23680 NZ_CP100601.1 Protein Homology CDS 4892655 4893062 . - 0 ID=cds-WP_002885086.1;Parent=gene-NLI98_RS23690;Dbxref=Genbank:WP_002885086.1;Name=WP_002885086.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224608.1;locus_tag=NLI98_RS23690;product=CidA/LrgA family protein;protein_id=WP_002885086.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4893168 4894049 . + . ID=gene-NLI98_RS23695;Name=NLI98_RS23695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23695;old_locus_tag=NLI98_23685 NZ_CP100601.1 Protein Homology CDS 4893168 4894049 . + 0 ID=cds-WP_002885085.1;Parent=gene-NLI98_RS23695;Dbxref=Genbank:WP_002885085.1;Name=WP_002885085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224607.1;locus_tag=NLI98_RS23695;product=LysR family transcriptional regulator;protein_id=WP_002885085.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4894212 4895858 . - . ID=gene-NLI98_RS23700;Name=NLI98_RS23700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23700;old_locus_tag=NLI98_23690 NZ_CP100601.1 Protein Homology CDS 4894212 4895858 . - 0 ID=cds-WP_002885082.1;Parent=gene-NLI98_RS23700;Dbxref=Genbank:WP_002885082.1;Name=WP_002885082.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;gbkey=CDS;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224606.1;locus_tag=NLI98_RS23700;product=Na+/H+ antiporter;protein_id=WP_002885082.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4896006 4897355 . - . ID=gene-NLI98_RS23705;Name=NLI98_RS23705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23705;old_locus_tag=NLI98_23695 NZ_CP100601.1 Protein Homology CDS 4896006 4897355 . - 0 ID=cds-WP_040214799.1;Parent=gene-NLI98_RS23705;Dbxref=Genbank:WP_040214799.1;Name=WP_040214799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132609.1;locus_tag=NLI98_RS23705;product=NCS2 family permease;protein_id=WP_040214799.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4897744 4898412 . - . ID=gene-NLI98_RS23710;Name=NLI98_RS23710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23710;old_locus_tag=NLI98_23700 NZ_CP100601.1 Protein Homology CDS 4897744 4898412 . - 0 ID=cds-WP_002885078.1;Parent=gene-NLI98_RS23710;Dbxref=Genbank:WP_002885078.1;Name=WP_002885078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224604.1;locus_tag=NLI98_RS23710;product=glutathione S-transferase;protein_id=WP_002885078.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4898672 4899130 . - . ID=gene-NLI98_RS23715;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=NLI98_RS23715;old_locus_tag=NLI98_23705 NZ_CP100601.1 Protein Homology CDS 4898672 4899130 . - 0 ID=cds-WP_002885077.1;Parent=gene-NLI98_RS23715;Dbxref=Genbank:WP_002885077.1;Name=WP_002885077.1;Ontology_term=GO:0006355,GO:0006979,GO:0003677,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224603.1;locus_tag=NLI98_RS23715;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_002885077.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4899215 4899544 . + . ID=gene-NLI98_RS23720;Name=soxS;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=NLI98_RS23720;old_locus_tag=NLI98_23710 NZ_CP100601.1 Protein Homology CDS 4899215 4899544 . + 0 ID=cds-WP_004151738.1;Parent=gene-NLI98_RS23720;Dbxref=Genbank:WP_004151738.1;Name=WP_004151738.1;gbkey=CDS;gene=soxS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224602.1;locus_tag=NLI98_RS23720;product=superoxide response transcriptional regulator SoxS;protein_id=WP_004151738.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4899529 4901133 . - . ID=gene-NLI98_RS23725;Name=NLI98_RS23725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23725;old_locus_tag=NLI98_23715 NZ_CP100601.1 Protein Homology CDS 4899529 4901133 . - 0 ID=cds-WP_088498004.1;Parent=gene-NLI98_RS23725;Dbxref=Genbank:WP_088498004.1;Name=WP_088498004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224601.1;locus_tag=NLI98_RS23725;product=EAL domain-containing protein;protein_id=WP_088498004.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4901640 4901921 . + . ID=gene-NLI98_RS23730;Name=NLI98_RS23730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23730;old_locus_tag=NLI98_23720 NZ_CP100601.1 Protein Homology CDS 4901640 4901921 . + 0 ID=cds-WP_004177826.1;Parent=gene-NLI98_RS23730;Dbxref=Genbank:WP_004177826.1;Name=WP_004177826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224600.1;locus_tag=NLI98_RS23730;product=YjcB family protein;protein_id=WP_004177826.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4901968 4902825 . - . ID=gene-NLI98_RS23735;Name=NLI98_RS23735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23735;old_locus_tag=NLI98_23725 NZ_CP100601.1 Protein Homology CDS 4901968 4902825 . - 0 ID=cds-WP_025862036.1;Parent=gene-NLI98_RS23735;Dbxref=Genbank:WP_025862036.1;Name=WP_025862036.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224599.1;locus_tag=NLI98_RS23735;product=ABC transporter permease subunit;protein_id=WP_025862036.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4902822 4903655 . - . ID=gene-NLI98_RS23740;Name=NLI98_RS23740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23740;old_locus_tag=NLI98_23730 NZ_CP100601.1 Protein Homology CDS 4902822 4903655 . - 0 ID=cds-WP_004177833.1;Parent=gene-NLI98_RS23740;Dbxref=Genbank:WP_004177833.1;Name=WP_004177833.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224598.1;locus_tag=NLI98_RS23740;product=ABC transporter permease subunit;protein_id=WP_004177833.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4903716 4904855 . - . ID=gene-NLI98_RS23745;Name=NLI98_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23745;old_locus_tag=NLI98_23735 NZ_CP100601.1 Protein Homology CDS 4903716 4904855 . - 0 ID=cds-WP_004177835.1;Parent=gene-NLI98_RS23745;Dbxref=Genbank:WP_004177835.1;Name=WP_004177835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224597.1;locus_tag=NLI98_RS23745;product=extracellular solute-binding protein;protein_id=WP_004177835.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4904885 4905916 . - . ID=gene-NLI98_RS23750;Name=NLI98_RS23750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23750;old_locus_tag=NLI98_23740 NZ_CP100601.1 Protein Homology CDS 4904885 4905916 . - 0 ID=cds-WP_004177837.1;Parent=gene-NLI98_RS23750;Dbxref=Genbank:WP_004177837.1;Name=WP_004177837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012543175.1;locus_tag=NLI98_RS23750;product=ABC transporter ATP-binding protein;protein_id=WP_004177837.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4906092 4906850 . + . ID=gene-NLI98_RS23755;Name=NLI98_RS23755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23755;old_locus_tag=NLI98_23745 NZ_CP100601.1 Protein Homology CDS 4906092 4906850 . + 0 ID=cds-WP_004151742.1;Parent=gene-NLI98_RS23755;Dbxref=Genbank:WP_004151742.1;Name=WP_004151742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224595.1;locus_tag=NLI98_RS23755;product=ribonuclease Z;protein_id=WP_004151742.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4906847 4907860 . + . ID=gene-NLI98_RS23760;Name=NLI98_RS23760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23760;old_locus_tag=NLI98_23750 NZ_CP100601.1 Protein Homology CDS 4906847 4907860 . + 0 ID=cds-WP_002885046.1;Parent=gene-NLI98_RS23760;Dbxref=Genbank:WP_002885046.1;Name=WP_002885046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224594.1;locus_tag=NLI98_RS23760;product=LacI family transcriptional regulator;protein_id=WP_002885046.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4907871 4908632 . + . ID=gene-NLI98_RS23765;Name=NLI98_RS23765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23765;old_locus_tag=NLI98_23755 NZ_CP100601.1 Protein Homology CDS 4907871 4908632 . + 0 ID=cds-WP_004177841.1;Parent=gene-NLI98_RS23765;Dbxref=Genbank:WP_004177841.1;Name=WP_004177841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224593.1;locus_tag=NLI98_RS23765;product=inositol monophosphatase;protein_id=WP_004177841.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4908671 4909024 . - . ID=gene-NLI98_RS23770;Name=iraM;gbkey=Gene;gene=iraM;gene_biotype=protein_coding;locus_tag=NLI98_RS23770;old_locus_tag=NLI98_23760 NZ_CP100601.1 Protein Homology CDS 4908671 4909024 . - 0 ID=cds-WP_002885039.1;Parent=gene-NLI98_RS23770;Dbxref=Genbank:WP_002885039.1;Name=WP_002885039.1;gbkey=CDS;gene=iraM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224592.1;locus_tag=NLI98_RS23770;product=anti-adapter protein IraM;protein_id=WP_002885039.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4909574 4911997 . - . ID=gene-NLI98_RS23775;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=NLI98_RS23775;old_locus_tag=NLI98_23765 NZ_CP100601.1 Protein Homology CDS 4909574 4911997 . - 0 ID=cds-WP_004146635.1;Parent=gene-NLI98_RS23775;Dbxref=Genbank:WP_004146635.1;Name=WP_004146635.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224591.1;locus_tag=NLI98_RS23775;product=outer membrane protein assembly factor BamA;protein_id=WP_004146635.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4912019 4912249 . + . ID=gene-NLI98_RS23780;Name=NLI98_RS23780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23780;old_locus_tag=NLI98_23770 NZ_CP100601.1 GeneMarkS-2+ CDS 4912019 4912249 . + 0 ID=cds-WP_032418199.1;Parent=gene-NLI98_RS23780;Dbxref=Genbank:WP_032418199.1;Name=WP_032418199.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS23780;product=hypothetical protein;protein_id=WP_032418199.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4912623 4914383 . + . ID=gene-NLI98_RS23785;Name=NLI98_RS23785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23785;old_locus_tag=NLI98_23775 NZ_CP100601.1 Protein Homology CDS 4912623 4914383 . + 0 ID=cds-WP_088498003.1;Parent=gene-NLI98_RS23785;Dbxref=Genbank:WP_088498003.1;Name=WP_088498003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224588.1;locus_tag=NLI98_RS23785;product=tannase/feruloyl esterase family alpha/beta hydrolase;protein_id=WP_088498003.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4914417 4914785 . + . ID=gene-NLI98_RS23790;Name=NLI98_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23790;old_locus_tag=NLI98_23780 NZ_CP100601.1 Protein Homology CDS 4914417 4914785 . + 0 ID=cds-WP_002885023.1;Parent=gene-NLI98_RS23790;Dbxref=Genbank:WP_002885023.1;Name=WP_002885023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224587.1;locus_tag=NLI98_RS23790;product=helix-turn-helix transcriptional regulator;protein_id=WP_002885023.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4915049 4917307 . - . ID=gene-NLI98_RS23795;Name=NLI98_RS23795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23795;old_locus_tag=NLI98_23785 NZ_CP100601.1 Protein Homology CDS 4915049 4917307 . - 0 ID=cds-WP_064151324.1;Parent=gene-NLI98_RS23795;Dbxref=Genbank:WP_064151324.1;Name=WP_064151324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224586.1;locus_tag=NLI98_RS23795;product=TonB-dependent siderophore receptor;protein_id=WP_064151324.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4917297 4917464 . + . ID=gene-NLI98_RS23800;Name=NLI98_RS23800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23800;old_locus_tag=NLI98_23790 NZ_CP100601.1 GeneMarkS-2+ CDS 4917297 4917464 . + 0 ID=cds-WP_159110653.1;Parent=gene-NLI98_RS23800;Dbxref=Genbank:WP_159110653.1;Name=WP_159110653.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS23800;product=hypothetical protein;protein_id=WP_159110653.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4917896 4919476 . + . ID=gene-NLI98_RS23805;Name=NLI98_RS23805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23805;old_locus_tag=NLI98_23795 NZ_CP100601.1 Protein Homology CDS 4917896 4919476 . + 0 ID=cds-WP_064151323.1;Parent=gene-NLI98_RS23805;Dbxref=Genbank:WP_064151323.1;Name=WP_064151323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224584.1;locus_tag=NLI98_RS23805;product=lytic transglycosylase F;protein_id=WP_064151323.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4919601 4920125 . - . ID=gene-NLI98_RS23810;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=NLI98_RS23810;old_locus_tag=NLI98_23800 NZ_CP100601.1 Protein Homology CDS 4919601 4920125 . - 0 ID=cds-WP_004151744.1;Parent=gene-NLI98_RS23810;Dbxref=Genbank:WP_004151744.1;Name=WP_004151744.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224583.1;locus_tag=NLI98_RS23810;product=single-stranded DNA-binding protein SSB1;protein_id=WP_004151744.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4920377 4923202 . + . ID=gene-NLI98_RS23815;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=NLI98_RS23815;old_locus_tag=NLI98_23805 NZ_CP100601.1 Protein Homology CDS 4920377 4923202 . + 0 ID=cds-WP_004146620.1;Parent=gene-NLI98_RS23815;Dbxref=Genbank:WP_004146620.1;Name=WP_004146620.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224582.1;locus_tag=NLI98_RS23815;product=excinuclease ABC subunit UvrA;protein_id=WP_004146620.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4923203 4923559 . - . ID=gene-NLI98_RS23820;Name=NLI98_RS23820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23820;old_locus_tag=NLI98_23810 NZ_CP100601.1 Protein Homology CDS 4923203 4923559 . - 0 ID=cds-WP_002884953.1;Parent=gene-NLI98_RS23820;Dbxref=Genbank:WP_002884953.1;Name=WP_002884953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224581.1;locus_tag=NLI98_RS23820;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_002884953.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4923563 4923979 . - . ID=gene-NLI98_RS23825;Name=NLI98_RS23825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23825;old_locus_tag=NLI98_23815 NZ_CP100601.1 Protein Homology CDS 4923563 4923979 . - 0 ID=cds-WP_002884951.1;Parent=gene-NLI98_RS23825;Dbxref=Genbank:WP_002884951.1;Name=WP_002884951.1;Ontology_term=GO:0008150,GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224580.1;locus_tag=NLI98_RS23825;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_002884951.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4924110 4924823 . - . ID=gene-NLI98_RS23830;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=NLI98_RS23830;old_locus_tag=NLI98_23820 NZ_CP100601.1 Protein Homology CDS 4924110 4924823 . - 0 ID=cds-WP_004151745.1;Parent=gene-NLI98_RS23830;Dbxref=Genbank:WP_004151745.1;Name=WP_004151745.1;Ontology_term=GO:0003993;gbkey=CDS;gene=aphA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224579.1;locus_tag=NLI98_RS23830;product=acid phosphatase AphA;protein_id=WP_004151745.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4925015 4926208 . - . ID=gene-NLI98_RS23835;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=NLI98_RS23835;old_locus_tag=NLI98_23825 NZ_CP100601.1 Protein Homology CDS 4925015 4926208 . - 0 ID=cds-WP_088498001.1;Parent=gene-NLI98_RS23835;Dbxref=Genbank:WP_088498001.1;Name=WP_088498001.1;gbkey=CDS;gene=tyrB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224578.1;locus_tag=NLI98_RS23835;product=aromatic amino acid transaminase;protein_id=WP_088498001.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4926385 4927464 . - . ID=gene-NLI98_RS23840;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=NLI98_RS23840;old_locus_tag=NLI98_23830 NZ_CP100601.1 Protein Homology CDS 4926385 4927464 . - 0 ID=cds-WP_004894957.1;Parent=gene-NLI98_RS23840;Dbxref=Genbank:WP_004894957.1;Name=WP_004894957.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224577.1;locus_tag=NLI98_RS23840;product=alanine racemase;protein_id=WP_004894957.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4927496 4928911 . - . ID=gene-NLI98_RS23845;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=NLI98_RS23845;old_locus_tag=NLI98_23835 NZ_CP100601.1 Protein Homology CDS 4927496 4928911 . - 0 ID=cds-WP_002884942.1;Parent=gene-NLI98_RS23845;Dbxref=Genbank:WP_002884942.1;Name=WP_002884942.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224576.1;locus_tag=NLI98_RS23845;product=replicative DNA helicase;protein_id=WP_002884942.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4929081 4930064 . + . ID=gene-NLI98_RS23850;Name=NLI98_RS23850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23850;old_locus_tag=NLI98_23840 NZ_CP100601.1 Protein Homology CDS 4929081 4930064 . + 0 ID=cds-WP_002884941.1;Parent=gene-NLI98_RS23850;Dbxref=Genbank:WP_002884941.1;Name=WP_002884941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224575.1;locus_tag=NLI98_RS23850;product=quinone oxidoreductase;protein_id=WP_002884941.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4930247 4930489 . - . ID=gene-NLI98_RS23855;Name=pspG;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=NLI98_RS23855;old_locus_tag=NLI98_23845 NZ_CP100601.1 Protein Homology CDS 4930247 4930489 . - 0 ID=cds-WP_004894969.1;Parent=gene-NLI98_RS23855;Dbxref=Genbank:WP_004894969.1;Name=WP_004894969.1;gbkey=CDS;gene=pspG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224574.1;locus_tag=NLI98_RS23855;product=envelope stress response protein PspG;protein_id=WP_004894969.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4930629 4931627 . - . ID=gene-NLI98_RS23860;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=NLI98_RS23860;old_locus_tag=NLI98_23850 NZ_CP100601.1 Protein Homology CDS 4930629 4931627 . - 0 ID=cds-WP_002884937.1;Parent=gene-NLI98_RS23860;Dbxref=Genbank:WP_002884937.1;Name=WP_002884937.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224573.1;locus_tag=NLI98_RS23860;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_002884937.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4931728 4932216 . - . ID=gene-NLI98_RS23865;Name=NLI98_RS23865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23865;old_locus_tag=NLI98_23855 NZ_CP100601.1 Protein Homology CDS 4931728 4932216 . - 0 ID=cds-WP_088498000.1;Parent=gene-NLI98_RS23865;Dbxref=Genbank:WP_088498000.1;Name=WP_088498000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224572.1;locus_tag=NLI98_RS23865;product=cupin domain-containing protein;protein_id=WP_088498000.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4932466 4932981 . + . ID=gene-NLI98_RS23870;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=NLI98_RS23870;old_locus_tag=NLI98_23860 NZ_CP100601.1 Protein Homology CDS 4932466 4932981 . + 0 ID=cds-WP_002884931.1;Parent=gene-NLI98_RS23870;Dbxref=Genbank:WP_002884931.1;Name=WP_002884931.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224570.1;locus_tag=NLI98_RS23870;product=zinc uptake transcriptional repressor Zur;protein_id=WP_002884931.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4933077 4933286 . - . ID=gene-NLI98_RS23875;Name=NLI98_RS23875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23875;old_locus_tag=NLI98_23865 NZ_CP100601.1 Protein Homology CDS 4933077 4933286 . - 0 ID=cds-WP_004151747.1;Parent=gene-NLI98_RS23875;Dbxref=Genbank:WP_004151747.1;Name=WP_004151747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224569.1;locus_tag=NLI98_RS23875;product=CsbD family protein;protein_id=WP_004151747.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4933352 4933501 . + . ID=gene-NLI98_RS23880;Name=NLI98_RS23880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23880;old_locus_tag=NLI98_23870 NZ_CP100601.1 Protein Homology CDS 4933352 4933501 . + 0 ID=cds-WP_032434078.1;Parent=gene-NLI98_RS23880;Dbxref=Genbank:WP_032434078.1;Name=WP_032434078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224568.1;locus_tag=NLI98_RS23880;product=hypothetical protein;protein_id=WP_032434078.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4933521 4934837 . - . ID=gene-NLI98_RS23885;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=NLI98_RS23885;old_locus_tag=NLI98_23875 NZ_CP100601.1 Protein Homology CDS 4933521 4934837 . - 0 ID=cds-WP_004151748.1;Parent=gene-NLI98_RS23885;Dbxref=Genbank:WP_004151748.1;Name=WP_004151748.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;gene=dinF;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224567.1;locus_tag=NLI98_RS23885;product=MATE family efflux transporter DinF;protein_id=WP_004151748.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4934907 4935515 . - . ID=gene-NLI98_RS23890;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=NLI98_RS23890;old_locus_tag=NLI98_23880 NZ_CP100601.1 Protein Homology CDS 4934907 4935515 . - 0 ID=cds-WP_002884822.1;Parent=gene-NLI98_RS23890;Dbxref=Genbank:WP_002884822.1;Name=WP_002884822.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000646075.1;locus_tag=NLI98_RS23890;product=transcriptional repressor LexA;protein_id=WP_002884822.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4935638 4936006 . - . ID=gene-NLI98_RS23895;Name=NLI98_RS23895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23895;old_locus_tag=NLI98_23885 NZ_CP100601.1 Protein Homology CDS 4935638 4936006 . - 0 ID=cds-WP_002884819.1;Parent=gene-NLI98_RS23895;Dbxref=Genbank:WP_002884819.1;Name=WP_002884819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224565.1;locus_tag=NLI98_RS23895;product=diacylglycerol kinase;protein_id=WP_002884819.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4936135 4938558 . + . ID=gene-NLI98_RS23900;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=NLI98_RS23900;old_locus_tag=NLI98_23890 NZ_CP100601.1 Protein Homology CDS 4936135 4938558 . + 0 ID=cds-WP_004178269.1;Parent=gene-NLI98_RS23900;Dbxref=Genbank:WP_004178269.1;Name=WP_004178269.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224564.1;locus_tag=NLI98_RS23900;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_004178269.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4938607 4939473 . - . ID=gene-NLI98_RS23905;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=NLI98_RS23905;old_locus_tag=NLI98_23895 NZ_CP100601.1 Protein Homology CDS 4938607 4939473 . - 0 ID=cds-WP_046654777.1;Parent=gene-NLI98_RS23905;Dbxref=Genbank:WP_046654777.1;Name=WP_046654777.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224563.1;locus_tag=NLI98_RS23905;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_046654777.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4939486 4939983 . - . ID=gene-NLI98_RS23910;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=NLI98_RS23910;old_locus_tag=NLI98_23900 NZ_CP100601.1 Protein Homology CDS 4939486 4939983 . - 0 ID=cds-WP_002884807.1;Parent=gene-NLI98_RS23910;Dbxref=Genbank:WP_002884807.1;Name=WP_002884807.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224562.1;locus_tag=NLI98_RS23910;product=chorismate lyase;protein_id=WP_002884807.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4940171 4941115 . - . ID=gene-NLI98_RS23915;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=NLI98_RS23915;old_locus_tag=NLI98_23905 NZ_CP100601.1 Protein Homology CDS 4940171 4941115 . - 0 ID=cds-WP_049001600.1;Parent=gene-NLI98_RS23915;Dbxref=Genbank:WP_049001600.1;Name=WP_049001600.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224561.1;locus_tag=NLI98_RS23915;product=maltose operon protein MalM;protein_id=WP_049001600.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4941223 4942521 . - . ID=gene-NLI98_RS23920;Name=NLI98_RS23920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23920;old_locus_tag=NLI98_23910 NZ_CP100601.1 Protein Homology CDS 4941223 4942521 . - 0 ID=cds-WP_019725465.1;Parent=gene-NLI98_RS23920;Dbxref=Genbank:WP_019725465.1;Name=WP_019725465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224560.1;locus_tag=NLI98_RS23920;product=maltoporin;protein_id=WP_019725465.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4942605 4943714 . - . ID=gene-NLI98_RS23925;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=NLI98_RS23925;old_locus_tag=NLI98_23915 NZ_CP100601.1 Protein Homology CDS 4942605 4943714 . - 0 ID=cds-WP_002884743.1;Parent=gene-NLI98_RS23925;Dbxref=Genbank:WP_002884743.1;Name=WP_002884743.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011915502.1;locus_tag=NLI98_RS23925;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_002884743.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4944085 4945275 . + . ID=gene-NLI98_RS23930;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=NLI98_RS23930;old_locus_tag=NLI98_23920 NZ_CP100601.1 Protein Homology CDS 4944085 4945275 . + 0 ID=cds-WP_002884740.1;Parent=gene-NLI98_RS23930;Dbxref=Genbank:WP_002884740.1;Name=WP_002884740.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000695396.1;locus_tag=NLI98_RS23930;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_002884740.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4945393 4946937 . + . ID=gene-NLI98_RS23935;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=NLI98_RS23935;old_locus_tag=NLI98_23925 NZ_CP100601.1 Protein Homology CDS 4945393 4946937 . + 0 ID=cds-WP_002884726.1;Parent=gene-NLI98_RS23935;Dbxref=Genbank:WP_002884726.1;Name=WP_002884726.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224557.1;locus_tag=NLI98_RS23935;product=maltose ABC transporter permease MalF;protein_id=WP_002884726.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4946952 4947842 . + . ID=gene-NLI98_RS23940;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=NLI98_RS23940;old_locus_tag=NLI98_23930 NZ_CP100601.1 Protein Homology CDS 4946952 4947842 . + 0 ID=cds-WP_002884725.1;Parent=gene-NLI98_RS23940;Dbxref=Genbank:WP_002884725.1;Name=WP_002884725.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224556.1;locus_tag=NLI98_RS23940;product=maltose ABC transporter permease MalG;protein_id=WP_002884725.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4948034 4948444 . - . ID=gene-NLI98_RS23945;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=NLI98_RS23945;old_locus_tag=NLI98_23935 NZ_CP100601.1 Protein Homology CDS 4948034 4948444 . - 0 ID=cds-WP_002884721.1;Parent=gene-NLI98_RS23945;Dbxref=Genbank:WP_002884721.1;Name=WP_002884721.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224555.1;locus_tag=NLI98_RS23945;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_002884721.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4948818 4950095 . + . ID=gene-NLI98_RS23950;Name=NLI98_RS23950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23950;old_locus_tag=NLI98_23940 NZ_CP100601.1 Protein Homology CDS 4948818 4950095 . + 0 ID=cds-WP_046654778.1;Parent=gene-NLI98_RS23950;Dbxref=Genbank:WP_046654778.1;Name=WP_046654778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224554.1;locus_tag=NLI98_RS23950;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=WP_046654778.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4950179 4950919 . + . ID=gene-NLI98_RS23955;Name=NLI98_RS23955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23955;old_locus_tag=NLI98_23945 NZ_CP100601.1 Protein Homology CDS 4950179 4950919 . + 0 ID=cds-WP_004177854.1;Parent=gene-NLI98_RS23955;Dbxref=Genbank:WP_004177854.1;Name=WP_004177854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224553.1;locus_tag=NLI98_RS23955;product=AzlC family ABC transporter permease;protein_id=WP_004177854.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4950912 4951232 . + . ID=gene-NLI98_RS23960;Name=NLI98_RS23960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23960;old_locus_tag=NLI98_23950 NZ_CP100601.1 Protein Homology CDS 4950912 4951232 . + 0 ID=cds-WP_004177855.1;Parent=gene-NLI98_RS23960;Dbxref=Genbank:WP_004177855.1;Name=WP_004177855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004873013.1;locus_tag=NLI98_RS23960;product=AzlD domain-containing protein;protein_id=WP_004177855.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4951253 4951633 . + . ID=gene-NLI98_RS23965;Name=NLI98_RS23965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23965;old_locus_tag=NLI98_23955 NZ_CP100601.1 Protein Homology CDS 4951253 4951633 . + 0 ID=cds-WP_032433757.1;Parent=gene-NLI98_RS23965;Dbxref=Genbank:WP_032433757.1;Name=WP_032433757.1;Ontology_term=GO:0008152,GO:0019239;gbkey=CDS;go_function=deaminase activity|0019239||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224550.1;locus_tag=NLI98_RS23965;product=Rid family detoxifying hydrolase;protein_id=WP_032433757.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4951741 4952250 . + . ID=gene-NLI98_RS23970;Name=NLI98_RS23970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23970;old_locus_tag=NLI98_23960 NZ_CP100601.1 Protein Homology CDS 4951741 4952250 . + 0 ID=cds-WP_004177856.1;Parent=gene-NLI98_RS23970;Dbxref=Genbank:WP_004177856.1;Name=WP_004177856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224549.1;locus_tag=NLI98_RS23970;product=GNAT family N-acetyltransferase;protein_id=WP_004177856.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4952259 4952714 . + . ID=gene-NLI98_RS23975;Name=NLI98_RS23975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23975;old_locus_tag=NLI98_23965 NZ_CP100601.1 Protein Homology CDS 4952259 4952714 . + 0 ID=cds-WP_004177857.1;Parent=gene-NLI98_RS23975;Dbxref=Genbank:WP_004177857.1;Name=WP_004177857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224548.1;locus_tag=NLI98_RS23975;product=N-acetyltransferase;protein_id=WP_004177857.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4952765 4954414 . - . ID=gene-NLI98_RS23980;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=NLI98_RS23980;old_locus_tag=NLI98_23970 NZ_CP100601.1 Protein Homology CDS 4952765 4954414 . - 0 ID=cds-WP_002884631.1;Parent=gene-NLI98_RS23980;Dbxref=Genbank:WP_002884631.1;Name=WP_002884631.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224547.1;locus_tag=NLI98_RS23980;product=glucose-6-phosphate isomerase;protein_id=WP_002884631.1;transl_table=11 NZ_CP100601.1 cmsearch riboswitch 4954764 4954999 . + . ID=id-NZ_CP100601.1:4954764..4954999;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100601.1 RefSeq gene 4955179 4956528 . + . ID=gene-NLI98_RS23985;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=NLI98_RS23985;old_locus_tag=NLI98_23975 NZ_CP100601.1 Protein Homology CDS 4955179 4956528 . + 0 ID=cds-WP_004146591.1;Parent=gene-NLI98_RS23985;Dbxref=Genbank:WP_004146591.1;Name=WP_004146591.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224546.1;locus_tag=NLI98_RS23985;product=lysine-sensitive aspartokinase 3;protein_id=WP_004146591.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4956667 4957596 . + . ID=gene-NLI98_RS23990;Name=panS;gbkey=Gene;gene=panS;gene_biotype=protein_coding;locus_tag=NLI98_RS23990;old_locus_tag=NLI98_23980 NZ_CP100601.1 Protein Homology CDS 4956667 4957596 . + 0 ID=cds-WP_002884627.1;Parent=gene-NLI98_RS23990;Dbxref=Genbank:WP_002884627.1;Name=WP_002884627.1;gbkey=CDS;gene=panS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224545.1;locus_tag=NLI98_RS23990;product=ketopantoate/pantoate/pantothenate transporter PanS;protein_id=WP_002884627.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4957713 4957985 . + . ID=gene-NLI98_RS23995;Name=NLI98_RS23995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS23995;old_locus_tag=NLI98_23985 NZ_CP100601.1 Protein Homology CDS 4957713 4957985 . + 0 ID=cds-WP_002884625.1;Parent=gene-NLI98_RS23995;Dbxref=Genbank:WP_002884625.1;Name=WP_002884625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224544.1;locus_tag=NLI98_RS23995;product=DUF3811 domain-containing protein;protein_id=WP_002884625.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4957982 4958857 . - . ID=gene-NLI98_RS24000;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=NLI98_RS24000;old_locus_tag=NLI98_23990 NZ_CP100601.1 Protein Homology CDS 4957982 4958857 . - 0 ID=cds-WP_002884619.1;Parent=gene-NLI98_RS24000;Dbxref=Genbank:WP_002884619.1;Name=WP_002884619.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224543.1;locus_tag=NLI98_RS24000;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_002884619.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4959056 4959745 . + . ID=gene-NLI98_RS24005;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=NLI98_RS24005;old_locus_tag=NLI98_23995 NZ_CP100601.1 Protein Homology CDS 4959056 4959745 . + 0 ID=cds-WP_004178262.1;Parent=gene-NLI98_RS24005;Dbxref=Genbank:WP_004178262.1;Name=WP_004178262.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312966.1;locus_tag=NLI98_RS24005;product=dipeptidase PepE;protein_id=WP_004178262.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4959858 4961489 . - . ID=gene-NLI98_RS24010;Name=NLI98_RS24010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24010;old_locus_tag=NLI98_24000 NZ_CP100601.1 Protein Homology CDS 4959858 4961489 . - 0 ID=cds-WP_004177864.1;Parent=gene-NLI98_RS24010;Dbxref=Genbank:WP_004177864.1;Name=WP_004177864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224534.1;locus_tag=NLI98_RS24010;product=Na/Pi cotransporter family protein;protein_id=WP_004177864.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4961619 4965302 . - . ID=gene-NLI98_RS24015;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=NLI98_RS24015;old_locus_tag=NLI98_24005 NZ_CP100601.1 Protein Homology CDS 4961619 4965302 . - 0 ID=cds-WP_004151753.1;Parent=gene-NLI98_RS24015;Dbxref=Genbank:WP_004151753.1;Name=WP_004151753.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224533.1;locus_tag=NLI98_RS24015;product=methionine synthase;protein_id=WP_004151753.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4965497 4966327 . + . ID=gene-NLI98_RS24020;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=NLI98_RS24020;old_locus_tag=NLI98_24010 NZ_CP100601.1 Protein Homology CDS 4965497 4966327 . + 0 ID=cds-WP_002884578.1;Parent=gene-NLI98_RS24020;Dbxref=Genbank:WP_002884578.1;Name=WP_002884578.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000258962.1;locus_tag=NLI98_RS24020;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_002884578.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4966377 4968161 . - . ID=gene-NLI98_RS24025;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=NLI98_RS24025;old_locus_tag=NLI98_24015 NZ_CP100601.1 Protein Homology CDS 4966377 4968161 . - 0 ID=cds-WP_002884575.1;Parent=gene-NLI98_RS24025;Dbxref=Genbank:WP_002884575.1;Name=WP_002884575.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224531.1;locus_tag=NLI98_RS24025;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_002884575.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4968264 4969568 . - . ID=gene-NLI98_RS24030;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=NLI98_RS24030;old_locus_tag=NLI98_24020 NZ_CP100601.1 Protein Homology CDS 4968264 4969568 . - 0 ID=cds-WP_002884570.1;Parent=gene-NLI98_RS24030;Dbxref=Genbank:WP_002884570.1;Name=WP_002884570.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463049.1;locus_tag=NLI98_RS24030;product=isocitrate lyase;protein_id=WP_002884570.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4969648 4971249 . - . ID=gene-NLI98_RS24035;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=NLI98_RS24035;old_locus_tag=NLI98_24025 NZ_CP100601.1 Protein Homology CDS 4969648 4971249 . - 0 ID=cds-WP_002884559.1;Parent=gene-NLI98_RS24035;Dbxref=Genbank:WP_002884559.1;Name=WP_002884559.1;Ontology_term=GO:0006099,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224529.1;locus_tag=NLI98_RS24035;product=malate synthase A;protein_id=WP_002884559.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4971510 4972439 . - . ID=gene-NLI98_RS24040;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=NLI98_RS24040;old_locus_tag=NLI98_24030 NZ_CP100601.1 Protein Homology CDS 4971510 4972439 . - 0 ID=cds-WP_004146576.1;Parent=gene-NLI98_RS24040;Dbxref=Genbank:WP_004146576.1;Name=WP_004146576.1;Ontology_term=GO:0009086,GO:0008899;gbkey=CDS;gene=metA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132837.1;locus_tag=NLI98_RS24040;product=homoserine O-succinyltransferase;protein_id=WP_004146576.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4972596 4973057 . + . ID=gene-NLI98_RS24045;Name=NLI98_RS24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24045;old_locus_tag=NLI98_24035 NZ_CP100601.1 Protein Homology CDS 4972596 4973057 . + 0 ID=cds-WP_004178258.1;Parent=gene-NLI98_RS24045;Dbxref=Genbank:WP_004178258.1;Name=WP_004178258.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224527.1;locus_tag=NLI98_RS24045;product=acetyltransferase;protein_id=WP_004178258.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4973220 4973335 . - . ID=gene-NLI98_RS24050;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NLI98_RS24050;old_locus_tag=NLI98_24040 NZ_CP100601.1 cmsearch rRNA 4973220 4973335 . - . ID=rna-NLI98_RS24050;Parent=gene-NLI98_RS24050;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS24050;product=5S ribosomal RNA NZ_CP100601.1 cmsearch exon 4973220 4973335 . - . ID=exon-NLI98_RS24050-1;Parent=rna-NLI98_RS24050;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS24050;product=5S ribosomal RNA NZ_CP100601.1 RefSeq gene 4973433 4976334 . - . ID=gene-NLI98_RS24055;Name=NLI98_RS24055;gbkey=Gene;gene_biotype=rRNA;locus_tag=NLI98_RS24055;old_locus_tag=NLI98_24045 NZ_CP100601.1 cmsearch rRNA 4973433 4976334 . - . ID=rna-NLI98_RS24055;Parent=gene-NLI98_RS24055;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS24055;product=23S ribosomal RNA NZ_CP100601.1 cmsearch exon 4973433 4976334 . - . ID=exon-NLI98_RS24055-1;Parent=rna-NLI98_RS24055;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS24055;product=23S ribosomal RNA NZ_CP100601.1 RefSeq gene 4976517 4976592 . - . ID=gene-NLI98_RS24060;Name=NLI98_RS24060;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS24060;old_locus_tag=NLI98_24050 NZ_CP100601.1 tRNAscan-SE tRNA 4976517 4976592 . - . ID=rna-NLI98_RS24060;Parent=gene-NLI98_RS24060;anticodon=(pos:complement(4976556..4976558));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24060;product=tRNA-Glu NZ_CP100601.1 tRNAscan-SE exon 4976517 4976592 . - . ID=exon-NLI98_RS24060-1;Parent=rna-NLI98_RS24060;anticodon=(pos:complement(4976556..4976558));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24060;product=tRNA-Glu NZ_CP100601.1 RefSeq gene 4976678 4978217 . - . ID=gene-NLI98_RS24065;Name=NLI98_RS24065;gbkey=Gene;gene_biotype=rRNA;locus_tag=NLI98_RS24065;old_locus_tag=NLI98_24055 NZ_CP100601.1 cmsearch rRNA 4976678 4978217 . - . ID=rna-NLI98_RS24065;Parent=gene-NLI98_RS24065;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS24065;product=16S ribosomal RNA NZ_CP100601.1 cmsearch exon 4976678 4978217 . - . ID=exon-NLI98_RS24065-1;Parent=rna-NLI98_RS24065;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS24065;product=16S ribosomal RNA NZ_CP100601.1 RefSeq gene 4978845 4980434 . + . ID=gene-NLI98_RS24070;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=NLI98_RS24070;old_locus_tag=NLI98_24060 NZ_CP100601.1 Protein Homology CDS 4978845 4980434 . + 0 ID=cds-WP_040227268.1;Parent=gene-NLI98_RS24070;Dbxref=Genbank:WP_040227268.1;Name=WP_040227268.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132841.1;locus_tag=NLI98_RS24070;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_040227268.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4980450 4981745 . + . ID=gene-NLI98_RS24075;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=NLI98_RS24075;old_locus_tag=NLI98_24065 NZ_CP100601.1 Protein Homology CDS 4980450 4981745 . + 0 ID=cds-WP_002884357.1;Parent=gene-NLI98_RS24075;Dbxref=Genbank:WP_002884357.1;Name=WP_002884357.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224525.1;locus_tag=NLI98_RS24075;product=phosphoribosylamine--glycine ligase;protein_id=WP_002884357.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4981735 4983066 . - . ID=gene-NLI98_RS24080;Name=zraR;gbkey=Gene;gene=zraR;gene_biotype=protein_coding;locus_tag=NLI98_RS24080;old_locus_tag=NLI98_24070 NZ_CP100601.1 Protein Homology CDS 4981735 4983066 . - 0 ID=cds-WP_048991144.1;Parent=gene-NLI98_RS24080;Dbxref=Genbank:WP_048991144.1;Name=WP_048991144.1;Ontology_term=GO:0000160,GO:0006355,GO:0043565;gbkey=CDS;gene=zraR;go_function=sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224524.1;locus_tag=NLI98_RS24080;product=sigma-54-dependent response regulator transcription factor ZraR;protein_id=WP_048991144.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4983053 4984447 . - . ID=gene-NLI98_RS24085;Name=zraS;gbkey=Gene;gene=zraS;gene_biotype=protein_coding;locus_tag=NLI98_RS24085;old_locus_tag=NLI98_24075 NZ_CP100601.1 Protein Homology CDS 4983053 4984447 . - 0 ID=cds-WP_004895017.1;Parent=gene-NLI98_RS24085;Dbxref=Genbank:WP_004895017.1;Name=WP_004895017.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=zraS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224523.1;locus_tag=NLI98_RS24085;product=two-component system sensor histidine kinase ZraS;protein_id=WP_004895017.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4984707 4985144 . + . ID=gene-NLI98_RS24090;Name=zraP;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=NLI98_RS24090;old_locus_tag=NLI98_24080 NZ_CP100601.1 Protein Homology CDS 4984707 4985144 . + 0 ID=cds-WP_021469532.1;Parent=gene-NLI98_RS24090;Dbxref=Genbank:WP_021469532.1;Name=WP_021469532.1;gbkey=CDS;gene=zraP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224521.1;locus_tag=NLI98_RS24090;product=zinc resistance sensor/chaperone ZraP;protein_id=WP_021469532.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4985148 4985843 . - . ID=gene-NLI98_RS24095;Name=NLI98_RS24095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24095;old_locus_tag=NLI98_24085 NZ_CP100601.1 Protein Homology CDS 4985148 4985843 . - 0 ID=cds-WP_002884344.1;Parent=gene-NLI98_RS24095;Dbxref=Genbank:WP_002884344.1;Name=WP_002884344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224520.1;locus_tag=NLI98_RS24095;product=DUF1481 domain-containing protein;protein_id=WP_002884344.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4985856 4986128 . - . ID=gene-NLI98_RS24100;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=NLI98_RS24100;old_locus_tag=NLI98_24090 NZ_CP100601.1 Protein Homology CDS 4985856 4986128 . - 0 ID=cds-WP_002884342.1;Parent=gene-NLI98_RS24100;Dbxref=Genbank:WP_002884342.1;Name=WP_002884342.1;gbkey=CDS;gene=hupA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=NLI98_RS24100;product=DNA-binding protein HU-alpha;protein_id=WP_002884342.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4986315 4986905 . - . ID=gene-NLI98_RS24105;Name=NLI98_RS24105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24105;old_locus_tag=NLI98_24095 NZ_CP100601.1 Protein Homology CDS 4986315 4986905 . - 0 ID=cds-WP_002884331.1;Parent=gene-NLI98_RS24105;Dbxref=Genbank:WP_002884331.1;Name=WP_002884331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224518.1;locus_tag=NLI98_RS24105;product=YjaG family protein;protein_id=WP_002884331.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4986948 4987619 . - . ID=gene-NLI98_RS24110;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=NLI98_RS24110;old_locus_tag=NLI98_24100 NZ_CP100601.1 Protein Homology CDS 4986948 4987619 . - 0 ID=cds-WP_064149236.1;Parent=gene-NLI98_RS24110;Dbxref=Genbank:WP_064149236.1;Name=WP_064149236.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224517.1;locus_tag=NLI98_RS24110;product=deoxyribonuclease V;protein_id=WP_064149236.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4987632 4988696 . - . ID=gene-NLI98_RS24115;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=NLI98_RS24115;old_locus_tag=NLI98_24105 NZ_CP100601.1 Protein Homology CDS 4987632 4988696 . - 0 ID=cds-WP_031591480.1;Parent=gene-NLI98_RS24115;Dbxref=Genbank:WP_031591480.1;Name=WP_031591480.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224516.1;locus_tag=NLI98_RS24115;product=uroporphyrinogen decarboxylase;protein_id=WP_031591480.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4988737 4989510 . - . ID=gene-NLI98_RS24120;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=NLI98_RS24120;old_locus_tag=NLI98_24110 NZ_CP100601.1 Protein Homology CDS 4988737 4989510 . - 0 ID=cds-WP_002884327.1;Parent=gene-NLI98_RS24120;Dbxref=Genbank:WP_002884327.1;Name=WP_002884327.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224515.1;locus_tag=NLI98_RS24120;product=NAD(+) diphosphatase;protein_id=WP_002884327.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4989604 4990101 . + . ID=gene-NLI98_RS24125;Name=NLI98_RS24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24125;old_locus_tag=NLI98_24115 NZ_CP100601.1 Protein Homology CDS 4989604 4990101 . + 0 ID=cds-WP_002884324.1;Parent=gene-NLI98_RS24125;Dbxref=Genbank:WP_002884324.1;Name=WP_002884324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224514.1;locus_tag=NLI98_RS24125;product=Rsd/AlgQ family anti-sigma factor;protein_id=WP_002884324.1;transl_table=11 NZ_CP100601.1 cmsearch riboswitch 4990154 4990278 . + . ID=id-NZ_CP100601.1:4990154..4990278;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100601.1 RefSeq gene 4990364 4992259 . + . ID=gene-NLI98_RS24130;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=NLI98_RS24130;old_locus_tag=NLI98_24120 NZ_CP100601.1 Protein Homology CDS 4990364 4992259 . + 0 ID=cds-WP_004178230.1;Parent=gene-NLI98_RS24130;Dbxref=Genbank:WP_004178230.1;Name=WP_004178230.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224513.1;locus_tag=NLI98_RS24130;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_004178230.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4992259 4992894 . + . ID=gene-NLI98_RS24135;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=NLI98_RS24135;old_locus_tag=NLI98_24125 NZ_CP100601.1 Protein Homology CDS 4992259 4992894 . + 0 ID=cds-WP_004146300.1;Parent=gene-NLI98_RS24135;Dbxref=Genbank:WP_004146300.1;Name=WP_004146300.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224512.1;locus_tag=NLI98_RS24135;product=thiamine phosphate synthase;protein_id=WP_004146300.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4992887 4993642 . + . ID=gene-NLI98_RS24140;Name=NLI98_RS24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24140;old_locus_tag=NLI98_24130 NZ_CP100601.1 Protein Homology CDS 4992887 4993642 . + 0 ID=cds-WP_088498337.1;Parent=gene-NLI98_RS24140;Dbxref=Genbank:WP_088498337.1;Name=WP_088498337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224511.1;locus_tag=NLI98_RS24140;product=HesA/MoeB/ThiF family protein;protein_id=WP_088498337.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4993626 4993826 . + . ID=gene-NLI98_RS24145;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=NLI98_RS24145;old_locus_tag=NLI98_24135 NZ_CP100601.1 Protein Homology CDS 4993626 4993826 . + 0 ID=cds-WP_002884183.1;Parent=gene-NLI98_RS24145;Dbxref=Genbank:WP_002884183.1;Name=WP_002884183.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224510.1;locus_tag=NLI98_RS24145;product=sulfur carrier protein ThiS;protein_id=WP_002884183.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4993828 4994598 . + . ID=gene-NLI98_RS24150;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=NLI98_RS24150;old_locus_tag=NLI98_24140 NZ_CP100601.1 Protein Homology CDS 4993828 4994598 . + 0 ID=cds-WP_004146302.1;Parent=gene-NLI98_RS24150;Dbxref=Genbank:WP_004146302.1;Name=WP_004146302.1;gbkey=CDS;gene=thiG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224509.1;locus_tag=NLI98_RS24150;product=thiazole synthase;protein_id=WP_004146302.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4994595 4995728 . + . ID=gene-NLI98_RS24155;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=NLI98_RS24155;old_locus_tag=NLI98_24145 NZ_CP100601.1 Protein Homology CDS 4994595 4995728 . + 0 ID=cds-WP_004146303.1;Parent=gene-NLI98_RS24155;Dbxref=Genbank:WP_004146303.1;Name=WP_004146303.1;Ontology_term=GO:0009228,GO:0016829,GO:1904047;gbkey=CDS;gene=thiH;go_function=lyase activity|0016829||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224508.1;locus_tag=NLI98_RS24155;product=2-iminoacetate synthase ThiH;protein_id=WP_004146303.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4996045 4997577 . + . ID=gene-NLI98_RS24160;Name=NLI98_RS24160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24160;old_locus_tag=NLI98_24150 NZ_CP100601.1 Protein Homology CDS 4996045 4997577 . + 0 ID=cds-WP_004178221.1;Parent=gene-NLI98_RS24160;Dbxref=Genbank:WP_004178221.1;Name=WP_004178221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224506.1;locus_tag=NLI98_RS24160;product=sensor domain-containing diguanylate cyclase;protein_id=WP_004178221.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4997750 4998055 . + . ID=gene-NLI98_RS24165;Name=NLI98_RS24165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24165;old_locus_tag=NLI98_24155 NZ_CP100601.1 Protein Homology CDS 4997750 4998055 . + 0 ID=cds-WP_002884150.1;Parent=gene-NLI98_RS24165;Dbxref=Genbank:WP_002884150.1;Name=WP_002884150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206754.1;locus_tag=NLI98_RS24165;product=PTS sugar transporter subunit IIB;protein_id=WP_002884150.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4998059 4998376 . + . ID=gene-NLI98_RS24170;Name=NLI98_RS24170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24170;old_locus_tag=NLI98_24160 NZ_CP100601.1 Protein Homology CDS 4998059 4998376 . + 0 ID=cds-WP_004212847.1;Parent=gene-NLI98_RS24170;Dbxref=Genbank:WP_004212847.1;Name=WP_004212847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224504.1;locus_tag=NLI98_RS24170;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WP_004212847.1;transl_table=11 NZ_CP100601.1 RefSeq gene 4998419 4999759 . - . ID=gene-NLI98_RS24175;Name=dcuB;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=NLI98_RS24175;old_locus_tag=NLI98_24165 NZ_CP100601.1 Protein Homology CDS 4998419 4999759 . - 0 ID=cds-WP_004192681.1;Parent=gene-NLI98_RS24175;Dbxref=Genbank:WP_004192681.1;Name=WP_004192681.1;gbkey=CDS;gene=dcuB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224503.1;locus_tag=NLI98_RS24175;product=anaerobic C4-dicarboxylate transporter DcuB;protein_id=WP_004192681.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5000160 5004383 . - . ID=gene-NLI98_RS24180;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=NLI98_RS24180;old_locus_tag=NLI98_24170 NZ_CP100601.1 Protein Homology CDS 5000160 5004383 . - 0 ID=cds-WP_002884146.1;Parent=gene-NLI98_RS24180;Dbxref=Genbank:WP_002884146.1;Name=WP_002884146.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224502.1;locus_tag=NLI98_RS24180;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_002884146.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5004460 5008488 . - . ID=gene-NLI98_RS24185;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=NLI98_RS24185;old_locus_tag=NLI98_24175 NZ_CP100601.1 Protein Homology CDS 5004460 5008488 . - 0 ID=cds-WP_004152306.1;Parent=gene-NLI98_RS24185;Dbxref=Genbank:WP_004152306.1;Name=WP_004152306.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=NLI98_RS24185;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_004152306.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5008813 5009178 . - . ID=gene-NLI98_RS24190;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=NLI98_RS24190;old_locus_tag=NLI98_24180 NZ_CP100601.1 Protein Homology CDS 5008813 5009178 . - 0 ID=cds-WP_002884142.1;Parent=gene-NLI98_RS24190;Dbxref=Genbank:WP_002884142.1;Name=WP_002884142.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=NLI98_RS24190;product=50S ribosomal protein L7/L12;protein_id=WP_002884142.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5009245 5009742 . - . ID=gene-NLI98_RS24195;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=NLI98_RS24195;old_locus_tag=NLI98_24185 NZ_CP100601.1 Protein Homology CDS 5009245 5009742 . - 0 ID=cds-WP_001207203.1;Parent=gene-NLI98_RS24195;Dbxref=Genbank:WP_001207203.1;Name=WP_001207203.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=NLI98_RS24195;product=50S ribosomal protein L10;protein_id=WP_001207203.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5010090 5010794 . - . ID=gene-NLI98_RS24200;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=NLI98_RS24200;old_locus_tag=NLI98_24190 NZ_CP100601.1 Protein Homology CDS 5010090 5010794 . - 0 ID=cds-WP_002884036.1;Parent=gene-NLI98_RS24200;Dbxref=Genbank:WP_002884036.1;Name=WP_002884036.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224498.1;locus_tag=NLI98_RS24200;product=50S ribosomal protein L1;protein_id=WP_002884036.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5010798 5011226 . - . ID=gene-NLI98_RS24205;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=NLI98_RS24205;old_locus_tag=NLI98_24195 NZ_CP100601.1 Protein Homology CDS 5010798 5011226 . - 0 ID=cds-WP_002884034.1;Parent=gene-NLI98_RS24205;Dbxref=Genbank:WP_002884034.1;Name=WP_002884034.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=NLI98_RS24205;product=50S ribosomal protein L11;protein_id=WP_002884034.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5011383 5011928 . - . ID=gene-NLI98_RS24210;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=NLI98_RS24210;old_locus_tag=NLI98_24200 NZ_CP100601.1 Protein Homology CDS 5011383 5011928 . - 0 ID=cds-WP_001287521.1;Parent=gene-NLI98_RS24210;Dbxref=Genbank:WP_001287521.1;Name=WP_001287521.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005280494.1;locus_tag=NLI98_RS24210;product=transcription termination/antitermination protein NusG;protein_id=WP_001287521.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5011930 5012313 . - . ID=gene-NLI98_RS24215;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=NLI98_RS24215;old_locus_tag=NLI98_24205 NZ_CP100601.1 Protein Homology CDS 5011930 5012313 . - 0 ID=cds-WP_002883772.1;Parent=gene-NLI98_RS24215;Dbxref=Genbank:WP_002883772.1;Name=WP_002883772.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007665874.1;locus_tag=NLI98_RS24215;product=preprotein translocase subunit SecE;protein_id=WP_002883772.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5012650 5013834 . - . ID=gene-NLI98_RS24220;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=NLI98_RS24220;old_locus_tag=NLI98_24210 NZ_CP100601.1 Protein Homology CDS 5012650 5013834 . - 0 ID=cds-WP_004174069.1-2;Parent=gene-NLI98_RS24220;Dbxref=Genbank:WP_004174069.1;Name=WP_004174069.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224494.1;locus_tag=NLI98_RS24220;product=elongation factor Tu;protein_id=WP_004174069.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5013950 5014025 . - . ID=gene-NLI98_RS24225;Name=NLI98_RS24225;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS24225;old_locus_tag=NLI98_24215 NZ_CP100601.1 tRNAscan-SE tRNA 5013950 5014025 . - . ID=rna-NLI98_RS24225;Parent=gene-NLI98_RS24225;anticodon=(pos:complement(5013990..5013992));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24225;product=tRNA-Thr NZ_CP100601.1 tRNAscan-SE exon 5013950 5014025 . - . ID=exon-NLI98_RS24225-1;Parent=rna-NLI98_RS24225;anticodon=(pos:complement(5013990..5013992));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24225;product=tRNA-Thr NZ_CP100601.1 RefSeq gene 5014031 5014105 . - . ID=gene-NLI98_RS24230;Name=NLI98_RS24230;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS24230;old_locus_tag=NLI98_24220 NZ_CP100601.1 tRNAscan-SE tRNA 5014031 5014105 . - . ID=rna-NLI98_RS24230;Parent=gene-NLI98_RS24230;anticodon=(pos:complement(5014070..5014072));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24230;product=tRNA-Gly NZ_CP100601.1 tRNAscan-SE exon 5014031 5014105 . - . ID=exon-NLI98_RS24230-1;Parent=rna-NLI98_RS24230;anticodon=(pos:complement(5014070..5014072));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24230;product=tRNA-Gly NZ_CP100601.1 RefSeq gene 5014221 5014305 . - . ID=gene-NLI98_RS24235;Name=NLI98_RS24235;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS24235;old_locus_tag=NLI98_24225 NZ_CP100601.1 tRNAscan-SE tRNA 5014221 5014305 . - . ID=rna-NLI98_RS24235;Parent=gene-NLI98_RS24235;anticodon=(pos:complement(5014269..5014271));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24235;product=tRNA-Tyr NZ_CP100601.1 tRNAscan-SE exon 5014221 5014305 . - . ID=exon-NLI98_RS24235-1;Parent=rna-NLI98_RS24235;anticodon=(pos:complement(5014269..5014271));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24235;product=tRNA-Tyr NZ_CP100601.1 RefSeq gene 5014316 5014391 . - . ID=gene-NLI98_RS24240;Name=NLI98_RS24240;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS24240;old_locus_tag=NLI98_24230 NZ_CP100601.1 tRNAscan-SE tRNA 5014316 5014391 . - . ID=rna-NLI98_RS24240;Parent=gene-NLI98_RS24240;anticodon=(pos:complement(5014356..5014358));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24240;product=tRNA-Thr NZ_CP100601.1 tRNAscan-SE exon 5014316 5014391 . - . ID=exon-NLI98_RS24240-1;Parent=rna-NLI98_RS24240;anticodon=(pos:complement(5014356..5014358));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24240;product=tRNA-Thr NZ_CP100601.1 RefSeq gene 5014820 5015770 . + . ID=gene-NLI98_RS24245;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=NLI98_RS24245;old_locus_tag=NLI98_24235 NZ_CP100601.1 Protein Homology CDS 5014820 5015770 . + 0 ID=cds-WP_002883524.1;Parent=gene-NLI98_RS24245;Dbxref=Genbank:WP_002883524.1;Name=WP_002883524.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463013.1;locus_tag=NLI98_RS24245;product=type I pantothenate kinase;protein_id=WP_002883524.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5015796 5016758 . - . ID=gene-NLI98_RS24250;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=NLI98_RS24250;old_locus_tag=NLI98_24240 NZ_CP100601.1 Protein Homology CDS 5015796 5016758 . - 0 ID=cds-WP_002883521.1;Parent=gene-NLI98_RS24250;Dbxref=Genbank:WP_002883521.1;Name=WP_002883521.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224492.1;locus_tag=NLI98_RS24250;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_002883521.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5016755 5017783 . - . ID=gene-NLI98_RS24255;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=NLI98_RS24255;old_locus_tag=NLI98_24245 NZ_CP100601.1 Protein Homology CDS 5016755 5017783 . - 0 ID=cds-WP_032418214.1;Parent=gene-NLI98_RS24255;Dbxref=Genbank:WP_032418214.1;Name=WP_032418214.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224491.1;locus_tag=NLI98_RS24255;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_032418214.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5018033 5018148 . - . ID=gene-NLI98_RS24260;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NLI98_RS24260;old_locus_tag=NLI98_24250 NZ_CP100601.1 cmsearch rRNA 5018033 5018148 . - . ID=rna-NLI98_RS24260;Parent=gene-NLI98_RS24260;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS24260;product=5S ribosomal RNA NZ_CP100601.1 cmsearch exon 5018033 5018148 . - . ID=exon-NLI98_RS24260-1;Parent=rna-NLI98_RS24260;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS24260;product=5S ribosomal RNA NZ_CP100601.1 RefSeq gene 5018245 5021146 . - . ID=gene-NLI98_RS24265;Name=NLI98_RS24265;gbkey=Gene;gene_biotype=rRNA;locus_tag=NLI98_RS24265;old_locus_tag=NLI98_24255 NZ_CP100601.1 cmsearch rRNA 5018245 5021146 . - . ID=rna-NLI98_RS24265;Parent=gene-NLI98_RS24265;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS24265;product=23S ribosomal RNA NZ_CP100601.1 cmsearch exon 5018245 5021146 . - . ID=exon-NLI98_RS24265-1;Parent=rna-NLI98_RS24265;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS24265;product=23S ribosomal RNA NZ_CP100601.1 RefSeq gene 5021316 5021391 . - . ID=gene-NLI98_RS24270;Name=NLI98_RS24270;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS24270;old_locus_tag=NLI98_24260 NZ_CP100601.1 tRNAscan-SE tRNA 5021316 5021391 . - . ID=rna-NLI98_RS24270;Parent=gene-NLI98_RS24270;anticodon=(pos:complement(5021356..5021358));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24270;product=tRNA-Ala NZ_CP100601.1 tRNAscan-SE exon 5021316 5021391 . - . ID=exon-NLI98_RS24270-1;Parent=rna-NLI98_RS24270;anticodon=(pos:complement(5021356..5021358));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24270;product=tRNA-Ala NZ_CP100601.1 RefSeq gene 5021428 5021504 . - . ID=gene-NLI98_RS24275;Name=NLI98_RS24275;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS24275;old_locus_tag=NLI98_24265 NZ_CP100601.1 tRNAscan-SE tRNA 5021428 5021504 . - . ID=rna-NLI98_RS24275;Parent=gene-NLI98_RS24275;anticodon=(pos:complement(5021468..5021470));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24275;product=tRNA-Ile NZ_CP100601.1 tRNAscan-SE exon 5021428 5021504 . - . ID=exon-NLI98_RS24275-1;Parent=rna-NLI98_RS24275;anticodon=(pos:complement(5021468..5021470));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24275;product=tRNA-Ile NZ_CP100601.1 RefSeq gene 5021574 5023113 . - . ID=gene-NLI98_RS24280;Name=NLI98_RS24280;gbkey=Gene;gene_biotype=rRNA;locus_tag=NLI98_RS24280;old_locus_tag=NLI98_24270 NZ_CP100601.1 cmsearch rRNA 5021574 5023113 . - . ID=rna-NLI98_RS24280;Parent=gene-NLI98_RS24280;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS24280;product=16S ribosomal RNA NZ_CP100601.1 cmsearch exon 5021574 5023113 . - . ID=exon-NLI98_RS24280-1;Parent=rna-NLI98_RS24280;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS24280;product=16S ribosomal RNA NZ_CP100601.1 RefSeq gene 5023501 5024034 . - . ID=gene-NLI98_RS24285;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=NLI98_RS24285;old_locus_tag=NLI98_24275 NZ_CP100601.1 Protein Homology CDS 5023501 5024034 . - 0 ID=cds-WP_002883453.1;Parent=gene-NLI98_RS24285;Dbxref=Genbank:WP_002883453.1;Name=WP_002883453.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224490.1;locus_tag=NLI98_RS24285;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_002883453.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5024046 5025497 . - . ID=gene-NLI98_RS24290;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=NLI98_RS24290;old_locus_tag=NLI98_24280 NZ_CP100601.1 Protein Homology CDS 5024046 5025497 . - 0 ID=cds-WP_002883450.1;Parent=gene-NLI98_RS24290;Dbxref=Genbank:WP_002883450.1;Name=WP_002883450.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004146450.1;locus_tag=NLI98_RS24290;product=Trk system potassium transporter TrkH;protein_id=WP_002883450.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5025536 5026150 . - . ID=gene-NLI98_RS24295;Name=NLI98_RS24295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24295;old_locus_tag=NLI98_24285 NZ_CP100601.1 Protein Homology CDS 5025536 5026150 . - 0 ID=cds-WP_088498441.1;Parent=gene-NLI98_RS24295;Dbxref=Genbank:WP_088498441.1;Name=WP_088498441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224488.1;locus_tag=NLI98_RS24295;product=IMPACT family protein;protein_id=WP_088498441.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5026150 5027481 . - . ID=gene-NLI98_RS24300;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=NLI98_RS24300;old_locus_tag=NLI98_24290 NZ_CP100601.1 Protein Homology CDS 5026150 5027481 . - 0 ID=cds-WP_004152060.1;Parent=gene-NLI98_RS24300;Dbxref=Genbank:WP_004152060.1;Name=WP_004152060.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801804.1;locus_tag=NLI98_RS24300;product=Xaa-Pro dipeptidase;protein_id=WP_004152060.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5027673 5029862 . + . ID=gene-NLI98_RS24305;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=NLI98_RS24305;old_locus_tag=NLI98_24295 NZ_CP100601.1 Protein Homology CDS 5027673 5029862 . + 0 ID=cds-WP_032418217.1;Parent=gene-NLI98_RS24305;Dbxref=Genbank:WP_032418217.1;Name=WP_032418217.1;Ontology_term=GO:0009062,GO:0003857,GO:0004165,GO:0004300,GO:0008692;gbkey=CDS;gene=fadB;go_function=3-hydroxyacyl-CoA dehydrogenase activity|0003857||IEA,delta(3)-delta(2)-enoyl-CoA isomerase activity|0004165||IEA,enoyl-CoA hydratase activity|0004300||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224486.1;locus_tag=NLI98_RS24305;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_032418217.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5029872 5031035 . + . ID=gene-NLI98_RS24310;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=NLI98_RS24310;old_locus_tag=NLI98_24300 NZ_CP100601.1 Protein Homology CDS 5029872 5031035 . + 0 ID=cds-WP_012737138.1;Parent=gene-NLI98_RS24310;Dbxref=Genbank:WP_012737138.1;Name=WP_012737138.1;Ontology_term=GO:0009062,GO:0003988;gbkey=CDS;gene=fadA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid catabolic process|0009062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224485.1;locus_tag=NLI98_RS24310;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_012737138.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5031142 5031843 . - . ID=gene-NLI98_RS24315;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=NLI98_RS24315;old_locus_tag=NLI98_24305 NZ_CP100601.1 Protein Homology CDS 5031142 5031843 . - 0 ID=cds-WP_002883448.1;Parent=gene-NLI98_RS24315;Dbxref=Genbank:WP_002883448.1;Name=WP_002883448.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224484.1;locus_tag=NLI98_RS24315;product=NAD(P)H-flavin reductase;protein_id=WP_002883448.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5031893 5033368 . - . ID=gene-NLI98_RS24320;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=NLI98_RS24320;old_locus_tag=NLI98_24310 NZ_CP100601.1 Protein Homology CDS 5031893 5033368 . - 0 ID=cds-WP_009309755.1;Parent=gene-NLI98_RS24320;Dbxref=Genbank:WP_009309755.1;Name=WP_009309755.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224483.1;locus_tag=NLI98_RS24320;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_009309755.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5033547 5034035 . + . ID=gene-NLI98_RS24325;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=NLI98_RS24325;old_locus_tag=NLI98_24315 NZ_CP100601.1 Protein Homology CDS 5033547 5034035 . + 0 ID=cds-WP_002883430.1;Parent=gene-NLI98_RS24325;Dbxref=Genbank:WP_002883430.1;Name=WP_002883430.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224481.1;locus_tag=NLI98_RS24325;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_002883430.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5034032 5034835 . - . ID=gene-NLI98_RS24330;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;locus_tag=NLI98_RS24330;old_locus_tag=NLI98_24320 NZ_CP100601.1 Protein Homology CDS 5034032 5034835 . - 0 ID=cds-WP_015959233.1;Parent=gene-NLI98_RS24330;Dbxref=Genbank:WP_015959233.1;Name=WP_015959233.1;Ontology_term=GO:0008408;gbkey=CDS;gene=tatD;go_function=3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224480.1;locus_tag=NLI98_RS24330;product=3'-5' ssDNA/RNA exonuclease TatD;protein_id=WP_015959233.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5034868 5035647 . - . ID=gene-NLI98_RS24335;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=NLI98_RS24335;old_locus_tag=NLI98_24325 NZ_CP100601.1 Protein Homology CDS 5034868 5035647 . - 0 ID=cds-WP_088498439.1;Parent=gene-NLI98_RS24335;Dbxref=Genbank:WP_088498439.1;Name=WP_088498439.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224479.1;locus_tag=NLI98_RS24335;product=Sec-independent protein translocase subunit TatC;protein_id=WP_088498439.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5035650 5036186 . - . ID=gene-NLI98_RS24340;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=NLI98_RS24340;old_locus_tag=NLI98_24330 NZ_CP100601.1 Protein Homology CDS 5035650 5036186 . - 0 ID=cds-WP_002883426.1;Parent=gene-NLI98_RS24340;Dbxref=Genbank:WP_002883426.1;Name=WP_002883426.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224478.1;locus_tag=NLI98_RS24340;product=Sec-independent protein translocase protein TatB;protein_id=WP_002883426.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5036190 5036441 . - . ID=gene-NLI98_RS24345;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=NLI98_RS24345;old_locus_tag=NLI98_24335 NZ_CP100601.1 Protein Homology CDS 5036190 5036441 . - 0 ID=cds-WP_002883425.1;Parent=gene-NLI98_RS24345;Dbxref=Genbank:WP_002883425.1;Name=WP_002883425.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224477.1;locus_tag=NLI98_RS24345;product=Sec-independent protein translocase subunit TatA;protein_id=WP_002883425.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5036571 5038211 . - . ID=gene-NLI98_RS24350;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=NLI98_RS24350;old_locus_tag=NLI98_24340 NZ_CP100601.1 Protein Homology CDS 5036571 5038211 . - 0 ID=cds-WP_264452035.1;Parent=gene-NLI98_RS24350;Dbxref=Genbank:WP_264452035.1;Name=WP_264452035.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224476.1;locus_tag=NLI98_RS24350;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_264452035.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5038208 5038813 . - . ID=gene-NLI98_RS24355;Name=NLI98_RS24355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24355;old_locus_tag=NLI98_24345 NZ_CP100601.1 Protein Homology CDS 5038208 5038813 . - 0 ID=cds-WP_002883422.1;Parent=gene-NLI98_RS24355;Dbxref=Genbank:WP_002883422.1;Name=WP_002883422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224475.1;locus_tag=NLI98_RS24355;product=SCP2 domain-containing protein;protein_id=WP_002883422.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5038827 5039582 . - . ID=gene-NLI98_RS24360;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=NLI98_RS24360;old_locus_tag=NLI98_24350 NZ_CP100601.1 Protein Homology CDS 5038827 5039582 . - 0 ID=cds-WP_002883421.1;Parent=gene-NLI98_RS24360;Dbxref=Genbank:WP_002883421.1;Name=WP_002883421.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224474.1;locus_tag=NLI98_RS24360;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_002883421.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5039653 5041101 . - . ID=gene-NLI98_RS24365;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=NLI98_RS24365;old_locus_tag=NLI98_24355 NZ_CP100601.1 Protein Homology CDS 5039653 5041101 . - 0 ID=cds-WP_002883420.1;Parent=gene-NLI98_RS24365;Dbxref=Genbank:WP_002883420.1;Name=WP_002883420.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224473.1;locus_tag=NLI98_RS24365;product=DNA recombination protein RmuC;protein_id=WP_002883420.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5041237 5041998 . - . ID=gene-NLI98_RS24370;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=NLI98_RS24370;old_locus_tag=NLI98_24360 NZ_CP100601.1 Protein Homology CDS 5041237 5041998 . - 0 ID=cds-WP_004181652.1;Parent=gene-NLI98_RS24370;Dbxref=Genbank:WP_004181652.1;Name=WP_004181652.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224472.1;locus_tag=NLI98_RS24370;product=uridine phosphorylase;protein_id=WP_004181652.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5042271 5043083 . + . ID=gene-NLI98_RS24375;Name=NLI98_RS24375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24375;old_locus_tag=NLI98_24365 NZ_CP100601.1 Protein Homology CDS 5042271 5043083 . + 0 ID=cds-WP_002883417.1;Parent=gene-NLI98_RS24375;Dbxref=Genbank:WP_002883417.1;Name=WP_002883417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224471.1;locus_tag=NLI98_RS24375;product=dienelactone hydrolase family protein;protein_id=WP_002883417.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5043142 5045406 . - . ID=gene-NLI98_RS24380;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=NLI98_RS24380;old_locus_tag=NLI98_24370 NZ_CP100601.1 Protein Homology CDS 5043142 5045406 . - 0 ID=cds-WP_002883416.1;Parent=gene-NLI98_RS24380;Dbxref=Genbank:WP_002883416.1;Name=WP_002883416.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224470.1;locus_tag=NLI98_RS24380;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_002883416.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5045654 5046607 . + . ID=gene-NLI98_RS24385;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=NLI98_RS24385;old_locus_tag=NLI98_24375 NZ_CP100601.1 Protein Homology CDS 5045654 5046607 . + 0 ID=cds-WP_002883415.1;Parent=gene-NLI98_RS24385;Dbxref=Genbank:WP_002883415.1;Name=WP_002883415.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012969186.1;locus_tag=NLI98_RS24385;product=HTH-type transcriptional regulator MetR;protein_id=WP_002883415.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5046495 5047394 . - . ID=gene-NLI98_RS24390;Name=NLI98_RS24390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24390;old_locus_tag=NLI98_24380 NZ_CP100601.1 Protein Homology CDS 5046495 5047394 . - 0 ID=cds-WP_002883414.1;Parent=gene-NLI98_RS24390;Dbxref=Genbank:WP_002883414.1;Name=WP_002883414.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224469.1;locus_tag=NLI98_RS24390;product=carboxylate/amino acid/amine transporter;protein_id=WP_002883414.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5047483 5048283 . - . ID=gene-NLI98_RS24395;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=NLI98_RS24395;old_locus_tag=NLI98_24385 NZ_CP100601.1 Protein Homology CDS 5047483 5048283 . - 0 ID=cds-WP_004146466.1;Parent=gene-NLI98_RS24395;Dbxref=Genbank:WP_004146466.1;Name=WP_004146466.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224468.1;locus_tag=NLI98_RS24395;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_004146466.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5048328 5049320 . - . ID=gene-NLI98_RS24400;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=NLI98_RS24400;old_locus_tag=NLI98_24390 NZ_CP100601.1 Protein Homology CDS 5048328 5049320 . - 0 ID=cds-WP_002883412.1;Parent=gene-NLI98_RS24400;Dbxref=Genbank:WP_002883412.1;Name=WP_002883412.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224467.1;locus_tag=NLI98_RS24400;product=lysophospholipase L2;protein_id=WP_002883412.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5049430 5050050 . + . ID=gene-NLI98_RS24405;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=NLI98_RS24405;old_locus_tag=NLI98_24395 NZ_CP100601.1 Protein Homology CDS 5049430 5050050 . + 0 ID=cds-WP_004181651.1;Parent=gene-NLI98_RS24405;Dbxref=Genbank:WP_004181651.1;Name=WP_004181651.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=rhtB;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224466.1;locus_tag=NLI98_RS24405;product=homoserine/homoserine lactone efflux protein;protein_id=WP_004181651.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5050213 5051121 . + . ID=gene-NLI98_RS24410;Name=NLI98_RS24410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24410;old_locus_tag=NLI98_24400 NZ_CP100601.1 Protein Homology CDS 5050213 5051121 . + 0 ID=cds-WP_020804042.1;Parent=gene-NLI98_RS24410;Dbxref=Genbank:WP_020804042.1;Name=WP_020804042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224465.1;locus_tag=NLI98_RS24410;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_020804042.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5051166 5051786 . - . ID=gene-NLI98_RS24415;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=NLI98_RS24415;old_locus_tag=NLI98_24405 NZ_CP100601.1 Protein Homology CDS 5051166 5051786 . - 0 ID=cds-WP_004152056.1;Parent=gene-NLI98_RS24415;Dbxref=Genbank:WP_004152056.1;Name=WP_004152056.1;Ontology_term=GO:0006865;gbkey=CDS;gene=rhtC;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224464.1;locus_tag=NLI98_RS24415;product=threonine export protein RhtC;protein_id=WP_004152056.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5051848 5053674 . - . ID=gene-NLI98_RS24420;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=NLI98_RS24420;old_locus_tag=NLI98_24410 NZ_CP100601.1 Protein Homology CDS 5051848 5053674 . - 0 ID=cds-WP_004152055.1;Parent=gene-NLI98_RS24420;Dbxref=Genbank:WP_004152055.1;Name=WP_004152055.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224463.1;locus_tag=NLI98_RS24420;product=ATP-dependent DNA helicase RecQ;protein_id=WP_004152055.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5053742 5054602 . - . ID=gene-NLI98_RS24425;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=NLI98_RS24425;old_locus_tag=NLI98_24415 NZ_CP100601.1 Protein Homology CDS 5053742 5054602 . - 0 ID=cds-WP_064278364.1;Parent=gene-NLI98_RS24425;Dbxref=Genbank:WP_064278364.1;Name=WP_064278364.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224462.1;locus_tag=NLI98_RS24425;product=phospholipase A;protein_id=WP_064278364.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5054755 5055219 . + . ID=gene-NLI98_RS24430;Name=NLI98_RS24430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24430;old_locus_tag=NLI98_24420 NZ_CP100601.1 Protein Homology CDS 5054755 5055219 . + 0 ID=cds-WP_002883404.1;Parent=gene-NLI98_RS24430;Dbxref=Genbank:WP_002883404.1;Name=WP_002883404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224461.1;locus_tag=NLI98_RS24430;product=thioesterase family protein;protein_id=WP_002883404.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5055268 5056161 . + . ID=gene-NLI98_RS24435;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=NLI98_RS24435;old_locus_tag=NLI98_24425 NZ_CP100601.1 Protein Homology CDS 5055268 5056161 . + 0 ID=cds-WP_002883402.1;Parent=gene-NLI98_RS24435;Dbxref=Genbank:WP_002883402.1;Name=WP_002883402.1;Ontology_term=GO:0016020;gbkey=CDS;gene=rarD;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224460.1;locus_tag=NLI98_RS24435;product=EamA family transporter RarD;protein_id=WP_002883402.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5056205 5057155 . - . ID=gene-NLI98_RS24440;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=NLI98_RS24440;old_locus_tag=NLI98_24430 NZ_CP100601.1 Protein Homology CDS 5056205 5057155 . - 0 ID=cds-WP_002883400.1;Parent=gene-NLI98_RS24440;Dbxref=Genbank:WP_002883400.1;Name=WP_002883400.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095;gbkey=CDS;gene=corA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947142.1;locus_tag=NLI98_RS24440;product=magnesium/cobalt transporter CorA;protein_id=WP_002883400.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5057511 5059673 . - . ID=gene-NLI98_RS24445;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=NLI98_RS24445;old_locus_tag=NLI98_24435 NZ_CP100601.1 Protein Homology CDS 5057511 5059673 . - 0 ID=cds-WP_002883398.1;Parent=gene-NLI98_RS24445;Dbxref=Genbank:WP_002883398.1;Name=WP_002883398.1;Ontology_term=GO:0006268,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224457.1;locus_tag=NLI98_RS24445;product=DNA helicase II;protein_id=WP_002883398.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5059737 5060453 . - . ID=gene-NLI98_RS24450;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=NLI98_RS24450;old_locus_tag=NLI98_24440 NZ_CP100601.1 Protein Homology CDS 5059737 5060453 . - 0 ID=cds-WP_023280712.1;Parent=gene-NLI98_RS24450;Dbxref=Genbank:WP_023280712.1;Name=WP_023280712.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224456.1;locus_tag=NLI98_RS24450;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_023280712.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5060453 5061355 . - . ID=gene-NLI98_RS24455;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=NLI98_RS24455;old_locus_tag=NLI98_24445 NZ_CP100601.1 Protein Homology CDS 5060453 5061355 . - 0 ID=cds-WP_002883396.1;Parent=gene-NLI98_RS24455;Dbxref=Genbank:WP_002883396.1;Name=WP_002883396.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224455.1;locus_tag=NLI98_RS24455;product=tyrosine recombinase XerC;protein_id=WP_002883396.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5061352 5062059 . - . ID=gene-NLI98_RS24460;Name=NLI98_RS24460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24460;old_locus_tag=NLI98_24450 NZ_CP100601.1 Protein Homology CDS 5061352 5062059 . - 0 ID=cds-WP_002883395.1;Parent=gene-NLI98_RS24460;Dbxref=Genbank:WP_002883395.1;Name=WP_002883395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224454.1;locus_tag=NLI98_RS24460;product=DUF484 domain-containing protein;protein_id=WP_002883395.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5062056 5062880 . - . ID=gene-NLI98_RS24465;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=NLI98_RS24465;old_locus_tag=NLI98_24455 NZ_CP100601.1 Protein Homology CDS 5062056 5062880 . - 0 ID=cds-WP_002883394.1;Parent=gene-NLI98_RS24465;Dbxref=Genbank:WP_002883394.1;Name=WP_002883394.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133314.1;locus_tag=NLI98_RS24465;product=diaminopimelate epimerase;protein_id=WP_002883394.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5062916 5063119 . - . ID=gene-NLI98_RS24470;Name=NLI98_RS24470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24470;old_locus_tag=NLI98_24460 NZ_CP100601.1 Protein Homology CDS 5062916 5063119 . - 0 ID=cds-WP_002883392.1;Parent=gene-NLI98_RS24470;Dbxref=Genbank:WP_002883392.1;Name=WP_002883392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224452.1;locus_tag=NLI98_RS24470;product=lipoprotein;protein_id=WP_002883392.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5063266 5063586 . + . ID=gene-NLI98_RS24475;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=NLI98_RS24475;old_locus_tag=NLI98_24465 NZ_CP100601.1 Protein Homology CDS 5063266 5063586 . + 0 ID=cds-WP_002883389.1;Parent=gene-NLI98_RS24475;Dbxref=Genbank:WP_002883389.1;Name=WP_002883389.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000999950.1;locus_tag=NLI98_RS24475;product=iron donor protein CyaY;protein_id=WP_002883389.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5063720 5066272 . - . ID=gene-NLI98_RS24480;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=NLI98_RS24480;old_locus_tag=NLI98_24470 NZ_CP100601.1 Protein Homology CDS 5063720 5066272 . - 0 ID=cds-WP_002883383.1;Parent=gene-NLI98_RS24480;Dbxref=Genbank:WP_002883383.1;Name=WP_002883383.1;Ontology_term=GO:0006171,GO:0004016;gbkey=CDS;gene=cyaA;go_function=adenylate cyclase activity|0004016||IEA;go_process=cAMP biosynthetic process|0006171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224450.1;locus_tag=NLI98_RS24480;product=class I adenylate cyclase;protein_id=WP_002883383.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5066630 5067571 . + . ID=gene-NLI98_RS24485;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=NLI98_RS24485;old_locus_tag=NLI98_24475 NZ_CP100601.1 Protein Homology CDS 5066630 5067571 . + 0 ID=cds-WP_002883381.1;Parent=gene-NLI98_RS24485;Dbxref=Genbank:WP_002883381.1;Name=WP_002883381.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224448.1;locus_tag=NLI98_RS24485;product=hydroxymethylbilane synthase;protein_id=WP_002883381.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5067568 5068308 . + . ID=gene-NLI98_RS24490;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=NLI98_RS24490;old_locus_tag=NLI98_24480 NZ_CP100601.1 Protein Homology CDS 5067568 5068308 . + 0 ID=cds-WP_002883380.1;Parent=gene-NLI98_RS24490;Dbxref=Genbank:WP_002883380.1;Name=WP_002883380.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224447.1;locus_tag=NLI98_RS24490;product=uroporphyrinogen-III synthase;protein_id=WP_002883380.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5068330 5069511 . + . ID=gene-NLI98_RS24495;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=NLI98_RS24495;old_locus_tag=NLI98_24485 NZ_CP100601.1 Protein Homology CDS 5068330 5069511 . + 0 ID=cds-WP_004150429.1;Parent=gene-NLI98_RS24495;Dbxref=Genbank:WP_004150429.1;Name=WP_004150429.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224446.1;locus_tag=NLI98_RS24495;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_004150429.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5069515 5070711 . + . ID=gene-NLI98_RS24500;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=NLI98_RS24500;old_locus_tag=NLI98_24490 NZ_CP100601.1 Protein Homology CDS 5069515 5070711 . + 0 ID=cds-WP_004150428.1;Parent=gene-NLI98_RS24500;Dbxref=Genbank:WP_004150428.1;Name=WP_004150428.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224445.1;locus_tag=NLI98_RS24500;product=protoheme IX biogenesis protein HemY;protein_id=WP_004150428.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5071173 5071249 . - . ID=gene-NLI98_RS24505;Name=NLI98_RS24505;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS24505;old_locus_tag=NLI98_24495 NZ_CP100601.1 tRNAscan-SE tRNA 5071173 5071249 . - . ID=rna-NLI98_RS24505;Parent=gene-NLI98_RS24505;anticodon=(pos:complement(5071213..5071215));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24505;product=tRNA-Pro NZ_CP100601.1 tRNAscan-SE exon 5071173 5071249 . - . ID=exon-NLI98_RS24505-1;Parent=rna-NLI98_RS24505;anticodon=(pos:complement(5071213..5071215));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24505;product=tRNA-Pro NZ_CP100601.1 RefSeq gene 5071292 5071378 . - . ID=gene-NLI98_RS24510;Name=NLI98_RS24510;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS24510;old_locus_tag=NLI98_24500 NZ_CP100601.1 tRNAscan-SE tRNA 5071292 5071378 . - . ID=rna-NLI98_RS24510;Parent=gene-NLI98_RS24510;anticodon=(pos:complement(5071342..5071344));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24510;product=tRNA-Leu NZ_CP100601.1 tRNAscan-SE exon 5071292 5071378 . - . ID=exon-NLI98_RS24510-1;Parent=rna-NLI98_RS24510;anticodon=(pos:complement(5071342..5071344));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24510;product=tRNA-Leu NZ_CP100601.1 RefSeq gene 5071402 5071477 . - . ID=gene-NLI98_RS24515;Name=NLI98_RS24515;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS24515;old_locus_tag=NLI98_24505 NZ_CP100601.1 tRNAscan-SE tRNA 5071402 5071477 . - . ID=rna-NLI98_RS24515;Parent=gene-NLI98_RS24515;anticodon=(pos:complement(5071442..5071444));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24515;product=tRNA-His NZ_CP100601.1 tRNAscan-SE exon 5071402 5071477 . - . ID=exon-NLI98_RS24515-1;Parent=rna-NLI98_RS24515;anticodon=(pos:complement(5071442..5071444));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24515;product=tRNA-His NZ_CP100601.1 RefSeq gene 5071533 5071609 . - . ID=gene-NLI98_RS24520;Name=NLI98_RS24520;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS24520;old_locus_tag=NLI98_24510 NZ_CP100601.1 tRNAscan-SE tRNA 5071533 5071609 . - . ID=rna-NLI98_RS24520;Parent=gene-NLI98_RS24520;anticodon=(pos:complement(5071573..5071575));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24520;product=tRNA-Arg NZ_CP100601.1 tRNAscan-SE exon 5071533 5071609 . - . ID=exon-NLI98_RS24520-1;Parent=rna-NLI98_RS24520;anticodon=(pos:complement(5071573..5071575));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24520;product=tRNA-Arg NZ_CP100601.1 RefSeq gene 5071712 5073097 . - . ID=gene-NLI98_RS24525;Name=NLI98_RS24525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24525;old_locus_tag=NLI98_24515 NZ_CP100601.1 Protein Homology CDS 5071712 5073097 . - 0 ID=cds-WP_002883322.1;Parent=gene-NLI98_RS24525;Dbxref=Genbank:WP_002883322.1;Name=WP_002883322.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224443.1;locus_tag=NLI98_RS24525;product=amino acid permease;protein_id=WP_002883322.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5073303 5074043 . - . ID=gene-NLI98_RS24530;Name=rffM;gbkey=Gene;gene=rffM;gene_biotype=protein_coding;locus_tag=NLI98_RS24530;old_locus_tag=NLI98_24520 NZ_CP100601.1 Protein Homology CDS 5073303 5074043 . - 0 ID=cds-WP_004181648.1;Parent=gene-NLI98_RS24530;Dbxref=Genbank:WP_004181648.1;Name=WP_004181648.1;Ontology_term=GO:0016740;gbkey=CDS;gene=rffM;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224442.1;locus_tag=NLI98_RS24530;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_004181648.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5074055 5075401 . - . ID=gene-NLI98_RS24535;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=NLI98_RS24535;old_locus_tag=NLI98_24525 NZ_CP100601.1 Protein Homology CDS 5074055 5075401 . - 0 ID=cds-WP_004146500.1;Parent=gene-NLI98_RS24535;Dbxref=Genbank:WP_004146500.1;Name=WP_004146500.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224441.1;locus_tag=NLI98_RS24535;product=ECA oligosaccharide polymerase;protein_id=WP_004146500.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5075398 5076474 . - . ID=gene-NLI98_RS24540;Name=NLI98_RS24540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24540;old_locus_tag=NLI98_24530 NZ_CP100601.1 Protein Homology CDS 5075398 5076474 . - 0 ID=cds-WP_088498438.1;Parent=gene-NLI98_RS24540;Dbxref=Genbank:WP_088498438.1;Name=WP_088498438.1;Ontology_term=GO:0036065,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=fucosylation|0036065||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224440.1;locus_tag=NLI98_RS24540;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_088498438.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5076471 5077721 . - . ID=gene-NLI98_RS24545;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=NLI98_RS24545;old_locus_tag=NLI98_24535 NZ_CP100601.1 Protein Homology CDS 5076471 5077721 . - 0 ID=cds-WP_004177945.1;Parent=gene-NLI98_RS24545;Dbxref=Genbank:WP_004177945.1;Name=WP_004177945.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224439.1;locus_tag=NLI98_RS24545;product=lipid III flippase WzxE;protein_id=WP_004177945.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5077723 5078853 . - . ID=gene-NLI98_RS24550;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=NLI98_RS24550;old_locus_tag=NLI98_24540 NZ_CP100601.1 Protein Homology CDS 5077723 5078853 . - 0 ID=cds-WP_040165713.1;Parent=gene-NLI98_RS24550;Dbxref=Genbank:WP_040165713.1;Name=WP_040165713.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224438.1;locus_tag=NLI98_RS24550;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_040165713.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5078859 5079533 . - . ID=gene-NLI98_RS24555;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=NLI98_RS24555;old_locus_tag=NLI98_24545 NZ_CP100601.1 Protein Homology CDS 5078859 5079533 . - 0 ID=cds-WP_004146507.1;Parent=gene-NLI98_RS24555;Dbxref=Genbank:WP_004146507.1;Name=WP_004146507.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224437.1;locus_tag=NLI98_RS24555;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_004146507.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5079511 5080392 . - . ID=gene-NLI98_RS24560;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=NLI98_RS24560;old_locus_tag=NLI98_24550 NZ_CP100601.1 Protein Homology CDS 5079511 5080392 . - 0 ID=cds-WP_023301353.1;Parent=gene-NLI98_RS24560;Dbxref=Genbank:WP_023301353.1;Name=WP_023301353.1;Ontology_term=GO:0009243,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224436.1;locus_tag=NLI98_RS24560;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_023301353.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5080411 5081478 . - . ID=gene-NLI98_RS24565;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=NLI98_RS24565;old_locus_tag=NLI98_24555 NZ_CP100601.1 Protein Homology CDS 5080411 5081478 . - 0 ID=cds-WP_088498437.1;Parent=gene-NLI98_RS24565;Dbxref=Genbank:WP_088498437.1;Name=WP_088498437.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224435.1;locus_tag=NLI98_RS24565;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_088498437.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5081475 5082737 . - . ID=gene-NLI98_RS24570;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=NLI98_RS24570;old_locus_tag=NLI98_24560 NZ_CP100601.1 Protein Homology CDS 5081475 5082737 . - 0 ID=cds-WP_088498436.1;Parent=gene-NLI98_RS24570;Dbxref=Genbank:WP_088498436.1;Name=WP_088498436.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224434.1;locus_tag=NLI98_RS24570;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_088498436.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5082734 5083864 . - . ID=gene-NLI98_RS24575;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=NLI98_RS24575;old_locus_tag=NLI98_24565 NZ_CP100601.1 Protein Homology CDS 5082734 5083864 . - 0 ID=cds-WP_002883297.1;Parent=gene-NLI98_RS24575;Dbxref=Genbank:WP_002883297.1;Name=WP_002883297.1;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_026253.1;locus_tag=NLI98_RS24575;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=WP_002883297.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5083921 5084967 . - . ID=gene-NLI98_RS24580;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=NLI98_RS24580;old_locus_tag=NLI98_24570 NZ_CP100601.1 Protein Homology CDS 5083921 5084967 . - 0 ID=cds-WP_002883296.1;Parent=gene-NLI98_RS24580;Dbxref=Genbank:WP_002883296.1;Name=WP_002883296.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462809.1;locus_tag=NLI98_RS24580;product=ECA polysaccharide chain length modulation protein;protein_id=WP_002883296.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5084981 5086084 . - . ID=gene-NLI98_RS24585;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=NLI98_RS24585;old_locus_tag=NLI98_24575 NZ_CP100601.1 Protein Homology CDS 5084981 5086084 . - 0 ID=cds-WP_002883295.1;Parent=gene-NLI98_RS24585;Dbxref=Genbank:WP_002883295.1;Name=WP_002883295.1;Ontology_term=GO:0009246,GO:0016780;gbkey=CDS;gene=wecA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224431.1;locus_tag=NLI98_RS24585;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_002883295.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5086325 5087584 . - . ID=gene-NLI98_RS24590;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=NLI98_RS24590;old_locus_tag=NLI98_24580 NZ_CP100601.1 Protein Homology CDS 5086325 5087584 . - 0 ID=cds-WP_002883293.1;Parent=gene-NLI98_RS24590;Dbxref=Genbank:WP_002883293.1;Name=WP_002883293.1;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=NLI98_RS24590;product=transcription termination factor Rho;protein_id=WP_002883293.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5087915 5088244 . - . ID=gene-NLI98_RS24595;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=NLI98_RS24595;old_locus_tag=NLI98_24585 NZ_CP100601.1 Protein Homology CDS 5087915 5088244 . - 0 ID=cds-WP_002883224.1;Parent=gene-NLI98_RS24595;Dbxref=Genbank:WP_002883224.1;Name=WP_002883224.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1;locus_tag=NLI98_RS24595;product=thioredoxin TrxA;protein_id=WP_002883224.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5088586 5089851 . + . ID=gene-NLI98_RS24600;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=NLI98_RS24600;old_locus_tag=NLI98_24590 NZ_CP100601.1 Protein Homology CDS 5088586 5089851 . + 0 ID=cds-WP_088498435.1;Parent=gene-NLI98_RS24600;Dbxref=Genbank:WP_088498435.1;Name=WP_088498435.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224428.1;locus_tag=NLI98_RS24600;product=ATP-dependent RNA helicase RhlB;protein_id=WP_088498435.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5089970 5091478 . + . ID=gene-NLI98_RS24605;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=NLI98_RS24605;old_locus_tag=NLI98_24595 NZ_CP100601.1 Protein Homology CDS 5089970 5091478 . + 0 ID=cds-WP_004150419.1;Parent=gene-NLI98_RS24605;Dbxref=Genbank:WP_004150419.1;Name=WP_004150419.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224427.1;locus_tag=NLI98_RS24605;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_004150419.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5091498 5092424 . + . ID=gene-NLI98_RS24610;Name=NLI98_RS24610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24610;old_locus_tag=NLI98_24600 NZ_CP100601.1 Protein Homology CDS 5091498 5092424 . + 0 ID=cds-WP_002883211.1;Parent=gene-NLI98_RS24610;Dbxref=Genbank:WP_002883211.1;Name=WP_002883211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224426.1;locus_tag=NLI98_RS24610;product=LysR family transcriptional regulator;protein_id=WP_002883211.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5092555 5093553 . + . ID=gene-NLI98_RS24615;Name=NLI98_RS24615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24615;old_locus_tag=NLI98_24605 NZ_CP100601.1 Protein Homology CDS 5092555 5093553 . + 0 ID=cds-WP_004181642.1;Parent=gene-NLI98_RS24615;Dbxref=Genbank:WP_004181642.1;Name=WP_004181642.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224425.1;locus_tag=NLI98_RS24615;product=amidohydrolase family protein;protein_id=WP_004181642.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5093616 5094338 . + . ID=gene-NLI98_RS24620;Name=NLI98_RS24620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24620;old_locus_tag=NLI98_24610 NZ_CP100601.1 Protein Homology CDS 5093616 5094338 . + 0 ID=cds-WP_002883185.1;Parent=gene-NLI98_RS24620;Dbxref=Genbank:WP_002883185.1;Name=WP_002883185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224424.1;locus_tag=NLI98_RS24620;product=DUF554 domain-containing protein;protein_id=WP_002883185.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5094343 5096364 . - . ID=gene-NLI98_RS24625;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=NLI98_RS24625;old_locus_tag=NLI98_24615 NZ_CP100601.1 Protein Homology CDS 5094343 5096364 . - 0 ID=cds-WP_004181641.1;Parent=gene-NLI98_RS24625;Dbxref=Genbank:WP_004181641.1;Name=WP_004181641.1;Ontology_term=GO:0006268,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224423.1;locus_tag=NLI98_RS24625;product=DNA helicase Rep;protein_id=WP_004181641.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5096477 5096758 . + . ID=gene-NLI98_RS24630;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=NLI98_RS24630;old_locus_tag=NLI98_24620 NZ_CP100601.1 Protein Homology CDS 5096477 5096758 . + 0 ID=cds-WP_002883181.1;Parent=gene-NLI98_RS24630;Dbxref=Genbank:WP_002883181.1;Name=WP_002883181.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224422.1;locus_tag=NLI98_RS24630;product=peptidylprolyl isomerase PpiC;protein_id=WP_002883181.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5096810 5097091 . + . ID=gene-NLI98_RS24635;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=NLI98_RS24635;old_locus_tag=NLI98_24625 NZ_CP100601.1 Protein Homology CDS 5096810 5097091 . + 0 ID=cds-WP_002883180.1;Parent=gene-NLI98_RS24635;Dbxref=Genbank:WP_002883180.1;Name=WP_002883180.1;gbkey=CDS;gene=ppiC;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224421.1;locus_tag=NLI98_RS24635;product=peptidylprolyl isomerase PpiC;protein_id=WP_002883180.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5097295 5098770 . - . ID=gene-NLI98_RS24640;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=NLI98_RS24640;old_locus_tag=NLI98_24630 NZ_CP100601.1 Protein Homology CDS 5097295 5098770 . - 0 ID=cds-WP_088498434.1;Parent=gene-NLI98_RS24640;Dbxref=Genbank:WP_088498434.1;Name=WP_088498434.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133363.1;locus_tag=NLI98_RS24640;product=ketol-acid reductoisomerase;protein_id=WP_088498434.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5098923 5099813 . + . ID=gene-NLI98_RS24645;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=NLI98_RS24645;old_locus_tag=NLI98_24635 NZ_CP100601.1 Protein Homology CDS 5098923 5099813 . + 0 ID=cds-WP_002883176.1;Parent=gene-NLI98_RS24645;Dbxref=Genbank:WP_002883176.1;Name=WP_002883176.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224419.1;locus_tag=NLI98_RS24645;product=HTH-type transcriptional activator IlvY;protein_id=WP_002883176.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5099810 5101354 . - . ID=gene-NLI98_RS24650;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=NLI98_RS24650;old_locus_tag=NLI98_24640 NZ_CP100601.1 Protein Homology CDS 5099810 5101354 . - 0 ID=cds-WP_088498433.1;Parent=gene-NLI98_RS24650;Dbxref=Genbank:WP_088498433.1;Name=WP_088498433.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312733.1;locus_tag=NLI98_RS24650;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_088498433.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5101357 5103207 . - . ID=gene-NLI98_RS24655;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=NLI98_RS24655;old_locus_tag=NLI98_24645 NZ_CP100601.1 Protein Homology CDS 5101357 5103207 . - 0 ID=cds-WP_002883173.1;Parent=gene-NLI98_RS24655;Dbxref=Genbank:WP_002883173.1;Name=WP_002883173.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=NLI98_RS24655;product=dihydroxy-acid dehydratase;protein_id=WP_002883173.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5103268 5104197 . - . ID=gene-NLI98_RS24660;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=NLI98_RS24660;old_locus_tag=NLI98_24650 NZ_CP100601.1 Protein Homology CDS 5103268 5104197 . - 0 ID=cds-WP_002883171.1;Parent=gene-NLI98_RS24660;Dbxref=Genbank:WP_002883171.1;Name=WP_002883171.1;Ontology_term=GO:0009082,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224416.1;locus_tag=NLI98_RS24660;product=branched-chain-amino-acid transaminase;protein_id=WP_002883171.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5104214 5104471 . - . ID=gene-NLI98_RS24665;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=NLI98_RS24665;old_locus_tag=NLI98_24655 NZ_CP100601.1 Protein Homology CDS 5104214 5104471 . - 0 ID=cds-WP_002883170.1;Parent=gene-NLI98_RS24665;Dbxref=Genbank:WP_002883170.1;Name=WP_002883170.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224415.1;locus_tag=NLI98_RS24665;product=acetolactate synthase 2 small subunit;protein_id=WP_002883170.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5104468 5106114 . - . ID=gene-NLI98_RS24670;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=NLI98_RS24670;old_locus_tag=NLI98_24660 NZ_CP100601.1 Protein Homology CDS 5104468 5106114 . - 0 ID=cds-WP_002883142.1;Parent=gene-NLI98_RS24670;Dbxref=Genbank:WP_002883142.1;Name=WP_002883142.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001012636.1;locus_tag=NLI98_RS24670;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_002883142.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5106255 5106353 . - . ID=gene-NLI98_RS24675;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=NLI98_RS24675;old_locus_tag=NLI98_24665 NZ_CP100601.1 Protein Homology CDS 5106255 5106353 . - 0 ID=cds-WP_001311244.1;Parent=gene-NLI98_RS24675;Dbxref=Genbank:WP_001311244.1;Name=WP_001311244.1;gbkey=CDS;gene=ilvL;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312728.1;locus_tag=NLI98_RS24675;product=ilv operon leader peptide;protein_id=WP_001311244.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5106708 5108228 . + . ID=gene-NLI98_RS24680;Name=NLI98_RS24680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24680;old_locus_tag=NLI98_24670 NZ_CP100601.1 Protein Homology CDS 5106708 5108228 . + 0 ID=cds-WP_088498432.1;Parent=gene-NLI98_RS24680;Dbxref=Genbank:WP_088498432.1;Name=WP_088498432.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224412.1;locus_tag=NLI98_RS24680;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_088498432.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5108253 5108591 . - . ID=gene-NLI98_RS24685;Name=NLI98_RS24685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24685;old_locus_tag=NLI98_24675 NZ_CP100601.1 Protein Homology CDS 5108253 5108591 . - 0 ID=cds-WP_004146520.1;Parent=gene-NLI98_RS24685;Dbxref=Genbank:WP_004146520.1;Name=WP_004146520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224411.1;locus_tag=NLI98_RS24685;product=DUF413 domain-containing protein;protein_id=WP_004146520.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5108710 5109531 . + . ID=gene-NLI98_RS24690;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=NLI98_RS24690;old_locus_tag=NLI98_24680 NZ_CP100601.1 Protein Homology CDS 5108710 5109531 . + 0 ID=cds-WP_004181639.1;Parent=gene-NLI98_RS24690;Dbxref=Genbank:WP_004181639.1;Name=WP_004181639.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224410.1;locus_tag=NLI98_RS24690;product=HTH-type transcriptional regulator HdfR;protein_id=WP_004181639.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5109640 5109715 . - . ID=gene-NLI98_RS24695;Name=NLI98_RS24695;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS24695;old_locus_tag=NLI98_24685 NZ_CP100601.1 tRNAscan-SE tRNA 5109640 5109715 . - . ID=rna-NLI98_RS24695;Parent=gene-NLI98_RS24695;anticodon=(pos:complement(5109680..5109682));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24695;product=tRNA-Trp NZ_CP100601.1 tRNAscan-SE exon 5109640 5109715 . - . ID=exon-NLI98_RS24695-1;Parent=rna-NLI98_RS24695;anticodon=(pos:complement(5109680..5109682));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24695;product=tRNA-Trp NZ_CP100601.1 RefSeq gene 5109769 5109845 . - . ID=gene-NLI98_RS24700;Name=NLI98_RS24700;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS24700;old_locus_tag=NLI98_24690 NZ_CP100601.1 tRNAscan-SE tRNA 5109769 5109845 . - . ID=rna-NLI98_RS24700;Parent=gene-NLI98_RS24700;anticodon=(pos:complement(5109809..5109811));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24700;product=tRNA-Asp NZ_CP100601.1 tRNAscan-SE exon 5109769 5109845 . - . ID=exon-NLI98_RS24700-1;Parent=rna-NLI98_RS24700;anticodon=(pos:complement(5109809..5109811));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24700;product=tRNA-Asp NZ_CP100601.1 RefSeq gene 5109903 5110018 . - . ID=gene-NLI98_RS24705;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NLI98_RS24705;old_locus_tag=NLI98_24695 NZ_CP100601.1 cmsearch rRNA 5109903 5110018 . - . ID=rna-NLI98_RS24705;Parent=gene-NLI98_RS24705;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS24705;product=5S ribosomal RNA NZ_CP100601.1 cmsearch exon 5109903 5110018 . - . ID=exon-NLI98_RS24705-1;Parent=rna-NLI98_RS24705;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS24705;product=5S ribosomal RNA NZ_CP100601.1 RefSeq gene 5110115 5113016 . - . ID=gene-NLI98_RS24710;Name=NLI98_RS24710;gbkey=Gene;gene_biotype=rRNA;locus_tag=NLI98_RS24710;old_locus_tag=NLI98_24700 NZ_CP100601.1 cmsearch rRNA 5110115 5113016 . - . ID=rna-NLI98_RS24710;Parent=gene-NLI98_RS24710;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS24710;product=23S ribosomal RNA NZ_CP100601.1 cmsearch exon 5110115 5113016 . - . ID=exon-NLI98_RS24710-1;Parent=rna-NLI98_RS24710;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS24710;product=23S ribosomal RNA NZ_CP100601.1 RefSeq gene 5113186 5113261 . - . ID=gene-NLI98_RS24715;Name=NLI98_RS24715;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS24715;old_locus_tag=NLI98_24705 NZ_CP100601.1 tRNAscan-SE tRNA 5113186 5113261 . - . ID=rna-NLI98_RS24715;Parent=gene-NLI98_RS24715;anticodon=(pos:complement(5113226..5113228));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24715;product=tRNA-Ala NZ_CP100601.1 tRNAscan-SE exon 5113186 5113261 . - . ID=exon-NLI98_RS24715-1;Parent=rna-NLI98_RS24715;anticodon=(pos:complement(5113226..5113228));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24715;product=tRNA-Ala NZ_CP100601.1 RefSeq gene 5113367 5113443 . - . ID=gene-NLI98_RS24720;Name=NLI98_RS24720;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS24720;old_locus_tag=NLI98_24710 NZ_CP100601.1 tRNAscan-SE tRNA 5113367 5113443 . - . ID=rna-NLI98_RS24720;Parent=gene-NLI98_RS24720;anticodon=(pos:complement(5113407..5113409));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24720;product=tRNA-Ile NZ_CP100601.1 tRNAscan-SE exon 5113367 5113443 . - . ID=exon-NLI98_RS24720-1;Parent=rna-NLI98_RS24720;anticodon=(pos:complement(5113407..5113409));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS24720;product=tRNA-Ile NZ_CP100601.1 RefSeq gene 5113515 5115054 . - . ID=gene-NLI98_RS24725;Name=NLI98_RS24725;gbkey=Gene;gene_biotype=rRNA;locus_tag=NLI98_RS24725;old_locus_tag=NLI98_24715 NZ_CP100601.1 cmsearch rRNA 5113515 5115054 . - . ID=rna-NLI98_RS24725;Parent=gene-NLI98_RS24725;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS24725;product=16S ribosomal RNA NZ_CP100601.1 cmsearch exon 5113515 5115054 . - . ID=exon-NLI98_RS24725-1;Parent=rna-NLI98_RS24725;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS24725;product=16S ribosomal RNA NZ_CP100601.1 RefSeq gene 5115451 5116302 . - . ID=gene-NLI98_RS24730;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=NLI98_RS24730;old_locus_tag=NLI98_24720 NZ_CP100601.1 Protein Homology CDS 5115451 5116302 . - 0 ID=cds-WP_002883026.1;Parent=gene-NLI98_RS24730;Dbxref=Genbank:WP_002883026.1;Name=WP_002883026.1;Ontology_term=GO:0006807,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008807849.1;locus_tag=NLI98_RS24730;product=glutamate racemase;protein_id=WP_002883026.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5116247 5118085 . - . ID=gene-NLI98_RS24735;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=NLI98_RS24735;old_locus_tag=NLI98_24725 NZ_CP100601.1 Protein Homology CDS 5116247 5118085 . - 0 ID=cds-WP_004146288.1;Parent=gene-NLI98_RS24735;Dbxref=Genbank:WP_004146288.1;Name=WP_004146288.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224408.1;locus_tag=NLI98_RS24735;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_004146288.1;transl_table=11 NZ_CP100601.1 cmsearch riboswitch 5118150 5118337 . - . ID=id-NZ_CP100601.1:5118150..5118337;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP100601.1 RefSeq gene 5118452 5119552 . + . ID=gene-NLI98_RS24740;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=NLI98_RS24740;old_locus_tag=NLI98_24730 NZ_CP100601.1 Protein Homology CDS 5118452 5119552 . + 0 ID=cds-WP_002883023.1;Parent=gene-NLI98_RS24740;Dbxref=Genbank:WP_002883023.1;Name=WP_002883023.1;Ontology_term=GO:0006400,GO:0030697;gbkey=CDS;gene=trmA;go_function=S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity|0030697||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224407.1;locus_tag=NLI98_RS24740;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_002883023.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5119604 5119963 . - . ID=gene-NLI98_RS24745;Name=NLI98_RS24745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24745;old_locus_tag=NLI98_24735 NZ_CP100601.1 Protein Homology CDS 5119604 5119963 . - 0 ID=cds-WP_002883021.1;Parent=gene-NLI98_RS24745;Dbxref=Genbank:WP_002883021.1;Name=WP_002883021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224406.1;locus_tag=NLI98_RS24745;product=YijD family membrane protein;protein_id=WP_002883021.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5119979 5120614 . - . ID=gene-NLI98_RS24750;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=NLI98_RS24750;old_locus_tag=NLI98_24740 NZ_CP100601.1 Protein Homology CDS 5119979 5120614 . - 0 ID=cds-WP_004151856.1;Parent=gene-NLI98_RS24750;Dbxref=Genbank:WP_004151856.1;Name=WP_004151856.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224405.1;locus_tag=NLI98_RS24750;product=HTH-type transcriptional repressor FabR;protein_id=WP_004151856.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5120811 5122211 . + . ID=gene-NLI98_RS24755;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=NLI98_RS24755;old_locus_tag=NLI98_24745 NZ_CP100601.1 Protein Homology CDS 5120811 5122211 . + 0 ID=cds-WP_002883016.1;Parent=gene-NLI98_RS24755;Dbxref=Genbank:WP_002883016.1;Name=WP_002883016.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (B-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463005.1;locus_tag=NLI98_RS24755;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_002883016.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5122194 5123111 . - . ID=gene-NLI98_RS24760;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=NLI98_RS24760;old_locus_tag=NLI98_24750 NZ_CP100601.1 Protein Homology CDS 5122194 5123111 . - 0 ID=cds-WP_002883015.1;Parent=gene-NLI98_RS24760;Dbxref=Genbank:WP_002883015.1;Name=WP_002883015.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831323.1;locus_tag=NLI98_RS24760;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_002883015.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5123371 5124744 . - . ID=gene-NLI98_RS24765;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=NLI98_RS24765;old_locus_tag=NLI98_24755 NZ_CP100601.1 Protein Homology CDS 5123371 5124744 . - 0 ID=cds-WP_065810659.1;Parent=gene-NLI98_RS24765;Dbxref=Genbank:WP_065810659.1;Name=WP_065810659.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224402.1;locus_tag=NLI98_RS24765;product=argininosuccinate lyase;protein_id=WP_065810659.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5124844 5125620 . - . ID=gene-NLI98_RS24770;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=NLI98_RS24770;old_locus_tag=NLI98_24760 NZ_CP100601.1 Protein Homology CDS 5124844 5125620 . - 0 ID=cds-WP_004187843.1;Parent=gene-NLI98_RS24770;Dbxref=Genbank:WP_004187843.1;Name=WP_004187843.1;Ontology_term=GO:0006592,GO:0003991;gbkey=CDS;gene=argB;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418394.3;locus_tag=NLI98_RS24770;product=acetylglutamate kinase;protein_id=WP_004187843.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5125627 5126631 . - . ID=gene-NLI98_RS24775;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=NLI98_RS24775;old_locus_tag=NLI98_24765 NZ_CP100601.1 Protein Homology CDS 5125627 5126631 . - 0 ID=cds-WP_004177967.1;Parent=gene-NLI98_RS24775;Dbxref=Genbank:WP_004177967.1;Name=WP_004177967.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122770.1;locus_tag=NLI98_RS24775;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_004177967.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5126745 5127896 . + . ID=gene-NLI98_RS24780;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=NLI98_RS24780;old_locus_tag=NLI98_24770 NZ_CP100601.1 Protein Homology CDS 5126745 5127896 . + 0 ID=cds-WP_004177969.1;Parent=gene-NLI98_RS24780;Dbxref=Genbank:WP_004177969.1;Name=WP_004177969.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224399.1;locus_tag=NLI98_RS24780;product=acetylornithine deacetylase;protein_id=WP_004177969.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5128155 5130806 . + . ID=gene-NLI98_RS24785;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=NLI98_RS24785;old_locus_tag=NLI98_24775 NZ_CP100601.1 Protein Homology CDS 5128155 5130806 . + 0 ID=cds-WP_004181636.1;Parent=gene-NLI98_RS24785;Dbxref=Genbank:WP_004181636.1;Name=WP_004181636.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1;locus_tag=NLI98_RS24785;product=phosphoenolpyruvate carboxylase;protein_id=WP_004181636.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5130850 5131500 . - . ID=gene-NLI98_RS24790;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=NLI98_RS24790;old_locus_tag=NLI98_24780 NZ_CP100601.1 Protein Homology CDS 5130850 5131500 . - 0 ID=cds-WP_004177973.1;Parent=gene-NLI98_RS24790;Dbxref=Genbank:WP_004177973.1;Name=WP_004177973.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224397.1;locus_tag=NLI98_RS24790;product=metal-binding protein ZinT;protein_id=WP_004177973.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5131525 5132511 . + . ID=gene-NLI98_RS24795;Name=NLI98_RS24795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24795;old_locus_tag=NLI98_24785 NZ_CP100601.1 Protein Homology CDS 5131525 5132511 . + 0 ID=cds-WP_004220885.1;Parent=gene-NLI98_RS24795;Dbxref=Genbank:WP_004220885.1;Name=WP_004220885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224396.1;locus_tag=NLI98_RS24795;product=AraC family transcriptional regulator;protein_id=WP_004220885.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5132717 5133379 . + . ID=gene-NLI98_RS24800;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=NLI98_RS24800;old_locus_tag=NLI98_24790 NZ_CP100601.1 Protein Homology CDS 5132717 5133379 . + 0 ID=cds-WP_004177977.1;Parent=gene-NLI98_RS24800;Dbxref=Genbank:WP_004177977.1;Name=WP_004177977.1;Ontology_term=GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224395.1;locus_tag=NLI98_RS24800;product=fructose-6-phosphate aldolase;protein_id=WP_004177977.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5133434 5134537 . + . ID=gene-NLI98_RS24805;Name=NLI98_RS24805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24805;old_locus_tag=NLI98_24795 NZ_CP100601.1 Protein Homology CDS 5133434 5134537 . + 0 ID=cds-WP_004146274.1;Parent=gene-NLI98_RS24805;Dbxref=Genbank:WP_004146274.1;Name=WP_004146274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224394.1;locus_tag=NLI98_RS24805;product=glycerol dehydrogenase;protein_id=WP_004146274.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5134601 5135482 . - . ID=gene-NLI98_RS24810;Name=NLI98_RS24810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24810;old_locus_tag=NLI98_24800 NZ_CP100601.1 Protein Homology CDS 5134601 5135482 . - 0 ID=cds-WP_004177983.1;Parent=gene-NLI98_RS24810;Dbxref=Genbank:WP_004177983.1;Name=WP_004177983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224393.1;locus_tag=NLI98_RS24810;product=DMT family transporter;protein_id=WP_004177983.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5135626 5136513 . - . ID=gene-NLI98_RS24815;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=NLI98_RS24815;old_locus_tag=NLI98_24805 NZ_CP100601.1 Protein Homology CDS 5135626 5136513 . - 0 ID=cds-WP_002882952.1;Parent=gene-NLI98_RS24815;Dbxref=Genbank:WP_002882952.1;Name=WP_002882952.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224392.1;locus_tag=NLI98_RS24815;product=methylenetetrahydrofolate reductase;protein_id=WP_002882952.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5136742 5137650 . - . ID=gene-NLI98_RS24820;Name=NLI98_RS24820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24820;old_locus_tag=NLI98_24810 NZ_CP100601.1 Protein Homology CDS 5136742 5137650 . - 0 ID=cds-WP_004187294.1;Parent=gene-NLI98_RS24820;Dbxref=Genbank:WP_004187294.1;Name=WP_004187294.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224391.1;locus_tag=NLI98_RS24820;product=LysR family transcriptional regulator;protein_id=WP_004187294.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5137742 5138113 . + . ID=gene-NLI98_RS24825;Name=NLI98_RS24825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24825;old_locus_tag=NLI98_24815 NZ_CP100601.1 Protein Homology CDS 5137742 5138113 . + 0 ID=cds-WP_002882947.1;Parent=gene-NLI98_RS24825;Dbxref=Genbank:WP_002882947.1;Name=WP_002882947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224390.1;locus_tag=NLI98_RS24825;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_002882947.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5138151 5139707 . - . ID=gene-NLI98_RS24830;Name=NLI98_RS24830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24830;old_locus_tag=NLI98_24820 NZ_CP100601.1 Protein Homology CDS 5138151 5139707 . - 0 ID=cds-WP_004177990.1;Parent=gene-NLI98_RS24830;Dbxref=Genbank:WP_004177990.1;Name=WP_004177990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224389.1;locus_tag=NLI98_RS24830;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_004177990.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5139846 5140982 . + . ID=gene-NLI98_RS24835;Name=NLI98_RS24835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24835;old_locus_tag=NLI98_24825 NZ_CP100601.1 Protein Homology CDS 5139846 5140982 . + 0 ID=cds-WP_088497972.1;Parent=gene-NLI98_RS24835;Dbxref=Genbank:WP_088497972.1;Name=WP_088497972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224388.1;locus_tag=NLI98_RS24835;product=cytoplasmic protein;protein_id=WP_088497972.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5140957 5143389 . - . ID=gene-NLI98_RS24840;Name=NLI98_RS24840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24840;old_locus_tag=NLI98_24830 NZ_CP100601.1 Protein Homology CDS 5140957 5143389 . - 0 ID=cds-WP_002882944.1;Parent=gene-NLI98_RS24840;Dbxref=Genbank:WP_002882944.1;Name=WP_002882944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1;locus_tag=NLI98_RS24840;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_002882944.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5143392 5144552 . - . ID=gene-NLI98_RS24845;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=NLI98_RS24845;old_locus_tag=NLI98_24835 NZ_CP100601.1 Protein Homology CDS 5143392 5144552 . - 0 ID=cds-WP_004150388.1;Parent=gene-NLI98_RS24845;Dbxref=Genbank:WP_004150388.1;Name=WP_004150388.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224386.1;locus_tag=NLI98_RS24845;product=cystathionine gamma-synthase;protein_id=WP_004150388.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5144820 5145137 . + . ID=gene-NLI98_RS24850;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=NLI98_RS24850;old_locus_tag=NLI98_24840 NZ_CP100601.1 Protein Homology CDS 5144820 5145137 . + 0 ID=cds-WP_002882924.1;Parent=gene-NLI98_RS24850;Dbxref=Genbank:WP_002882924.1;Name=WP_002882924.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=NLI98_RS24850;product=met regulon transcriptional regulator MetJ;protein_id=WP_002882924.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5145239 5145451 . - . ID=gene-NLI98_RS24855;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=NLI98_RS24855;old_locus_tag=NLI98_24845 NZ_CP100601.1 Protein Homology CDS 5145239 5145451 . - 0 ID=cds-WP_002882922.1;Parent=gene-NLI98_RS24855;Dbxref=Genbank:WP_002882922.1;Name=WP_002882922.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmE;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312890.1;locus_tag=NLI98_RS24855;product=50S ribosomal protein L31;protein_id=WP_002882922.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5145704 5147899 . + . ID=gene-NLI98_RS24860;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=NLI98_RS24860;old_locus_tag=NLI98_24850 NZ_CP100601.1 Protein Homology CDS 5145704 5147899 . + 0 ID=cds-WP_004177997.1;Parent=gene-NLI98_RS24860;Dbxref=Genbank:WP_004177997.1;Name=WP_004177997.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224383.1;locus_tag=NLI98_RS24860;product=primosomal protein N';protein_id=WP_004177997.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5148050 5149078 . + . ID=gene-NLI98_RS24865;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=NLI98_RS24865;old_locus_tag=NLI98_24855 NZ_CP100601.1 Protein Homology CDS 5148050 5149078 . + 0 ID=cds-WP_002882921.1;Parent=gene-NLI98_RS24865;Dbxref=Genbank:WP_002882921.1;Name=WP_002882921.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224381.1;locus_tag=NLI98_RS24865;product=DNA-binding transcriptional regulator CytR;protein_id=WP_002882921.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5149172 5150140 . + . ID=gene-NLI98_RS24870;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=NLI98_RS24870;old_locus_tag=NLI98_24860 NZ_CP100601.1 Protein Homology CDS 5149172 5150140 . + 0 ID=cds-WP_002882919.1;Parent=gene-NLI98_RS24870;Dbxref=Genbank:WP_002882919.1;Name=WP_002882919.1;Ontology_term=GO:0042834;gbkey=CDS;gene=ftsN;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882919.1;locus_tag=NLI98_RS24870;product=cell division protein FtsN;protein_id=WP_002882919.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5150232 5150762 . + . ID=gene-NLI98_RS24875;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=NLI98_RS24875;old_locus_tag=NLI98_24865 NZ_CP100601.1 Protein Homology CDS 5150232 5150762 . + 0 ID=cds-WP_002882918.1;Parent=gene-NLI98_RS24875;Dbxref=Genbank:WP_002882918.1;Name=WP_002882918.1;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224379.1;locus_tag=NLI98_RS24875;product=ATP-dependent protease subunit HslV;protein_id=WP_002882918.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5150772 5152106 . + . ID=gene-NLI98_RS24880;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=NLI98_RS24880;old_locus_tag=NLI98_24870 NZ_CP100601.1 Protein Homology CDS 5150772 5152106 . + 0 ID=cds-WP_002882917.1;Parent=gene-NLI98_RS24880;Dbxref=Genbank:WP_002882917.1;Name=WP_002882917.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524;gbkey=CDS;gene=hslU;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=NLI98_RS24880;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_002882917.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5152176 5153096 . + . ID=gene-NLI98_RS24885;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=NLI98_RS24885;old_locus_tag=NLI98_24875 NZ_CP100601.1 Protein Homology CDS 5152176 5153096 . + 0 ID=cds-WP_002882914.1;Parent=gene-NLI98_RS24885;Dbxref=Genbank:WP_002882914.1;Name=WP_002882914.1;gbkey=CDS;gene=menA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224377.1;locus_tag=NLI98_RS24885;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_002882914.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5153189 5153674 . + . ID=gene-NLI98_RS24890;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=NLI98_RS24890;old_locus_tag=NLI98_24880 NZ_CP100601.1 Protein Homology CDS 5153189 5153674 . + 0 ID=cds-WP_002882913.1;Parent=gene-NLI98_RS24890;Dbxref=Genbank:WP_002882913.1;Name=WP_002882913.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1;locus_tag=NLI98_RS24890;product=ribonuclease E activity regulator RraA;protein_id=WP_002882913.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5153736 5154698 . - . ID=gene-NLI98_RS24895;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=NLI98_RS24895;old_locus_tag=NLI98_24885 NZ_CP100601.1 Protein Homology CDS 5153736 5154698 . - 0 ID=cds-WP_002882911.1;Parent=gene-NLI98_RS24895;Dbxref=Genbank:WP_002882911.1;Name=WP_002882911.1;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1;locus_tag=NLI98_RS24895;product=6-phosphofructokinase;protein_id=WP_002882911.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5154895 5155797 . - . ID=gene-NLI98_RS24900;Name=fieF;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;locus_tag=NLI98_RS24900;old_locus_tag=NLI98_24890 NZ_CP100601.1 Protein Homology CDS 5154895 5155797 . - 0 ID=cds-WP_002882907.1;Parent=gene-NLI98_RS24900;Dbxref=Genbank:WP_002882907.1;Name=WP_002882907.1;Note=FieF%2C a metal efflux transporter%2C is a member of the CDF (cation diffusion facilitator) family of transporters.;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=fieF;go_component=membrane|0016020||IEA;go_function=cation transmembrane transporter activity|0008324||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224374.1;locus_tag=NLI98_RS24900;product=CDF family cation-efflux transporter FieF;protein_id=WP_002882907.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5155956 5156459 . - . ID=gene-NLI98_RS24905;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=NLI98_RS24905;old_locus_tag=NLI98_24895 NZ_CP100601.1 Protein Homology CDS 5155956 5156459 . - 0 ID=cds-WP_002882903.1;Parent=gene-NLI98_RS24905;Dbxref=Genbank:WP_002882903.1;Name=WP_002882903.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224373.1;locus_tag=NLI98_RS24905;product=cell-envelope stress modulator CpxP;protein_id=WP_002882903.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5156609 5157307 . + . ID=gene-NLI98_RS24910;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=NLI98_RS24910;old_locus_tag=NLI98_24900 NZ_CP100601.1 Protein Homology CDS 5156609 5157307 . + 0 ID=cds-WP_002882901.1;Parent=gene-NLI98_RS24910;Dbxref=Genbank:WP_002882901.1;Name=WP_002882901.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1;locus_tag=NLI98_RS24910;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_002882901.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5157304 5158677 . + . ID=gene-NLI98_RS24915;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=NLI98_RS24915;old_locus_tag=NLI98_24905 NZ_CP100601.1 Protein Homology CDS 5157304 5158677 . + 0 ID=cds-WP_002882898.1;Parent=gene-NLI98_RS24915;Dbxref=Genbank:WP_002882898.1;Name=WP_002882898.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462939.1;locus_tag=NLI98_RS24915;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_002882898.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5158740 5159414 . - . ID=gene-NLI98_RS24920;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=NLI98_RS24920;old_locus_tag=NLI98_24910 NZ_CP100601.1 Protein Homology CDS 5158740 5159414 . - 0 ID=cds-WP_088497970.1;Parent=gene-NLI98_RS24920;Dbxref=Genbank:WP_088497970.1;Name=WP_088497970.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224370.1;locus_tag=NLI98_RS24920;product=6-hydroxyaminopurine reductase;protein_id=WP_088497970.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5159487 5160107 . - . ID=gene-NLI98_RS24925;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=NLI98_RS24925;old_locus_tag=NLI98_24915 NZ_CP100601.1 Protein Homology CDS 5159487 5160107 . - 0 ID=cds-WP_002882894.1;Parent=gene-NLI98_RS24925;Dbxref=Genbank:WP_002882894.1;Name=WP_002882894.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1;locus_tag=NLI98_RS24925;product=superoxide dismutase [Mn];protein_id=WP_002882894.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5160396 5161430 . + . ID=gene-NLI98_RS24930;Name=rhaT;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=NLI98_RS24930;old_locus_tag=NLI98_24920 NZ_CP100601.1 Protein Homology CDS 5160396 5161430 . + 0 ID=cds-WP_002882892.1;Parent=gene-NLI98_RS24930;Dbxref=Genbank:WP_002882892.1;Name=WP_002882892.1;Ontology_term=GO:0008645,GO:0015153;gbkey=CDS;gene=rhaT;go_function=rhamnose transmembrane transporter activity|0015153||IEA;go_process=hexose transmembrane transport|0008645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224368.1;locus_tag=NLI98_RS24930;product=L-rhamnose/proton symporter RhaT;protein_id=WP_002882892.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5161463 5162308 . - . ID=gene-NLI98_RS24935;Name=rhaR;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=NLI98_RS24935;old_locus_tag=NLI98_24925 NZ_CP100601.1 Protein Homology CDS 5161463 5162308 . - 0 ID=cds-WP_088497969.1;Parent=gene-NLI98_RS24935;Dbxref=Genbank:WP_088497969.1;Name=WP_088497969.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224367.1;locus_tag=NLI98_RS24935;product=HTH-type transcriptional activator RhaR;protein_id=WP_088497969.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5162382 5163218 . - . ID=gene-NLI98_RS24940;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=NLI98_RS24940;old_locus_tag=NLI98_24930 NZ_CP100601.1 Protein Homology CDS 5162382 5163218 . - 0 ID=cds-WP_002882888.1;Parent=gene-NLI98_RS24940;Dbxref=Genbank:WP_002882888.1;Name=WP_002882888.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=rhaS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224366.1;locus_tag=NLI98_RS24940;product=HTH-type transcriptional activator RhaS;protein_id=WP_002882888.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5163529 5164995 . + . ID=gene-NLI98_RS24945;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=NLI98_RS24945;old_locus_tag=NLI98_24935 NZ_CP100601.1 Protein Homology CDS 5163529 5164995 . + 0 ID=cds-WP_023285681.1;Parent=gene-NLI98_RS24945;Dbxref=Genbank:WP_023285681.1;Name=WP_023285681.1;Ontology_term=GO:0005975,GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=carbohydrate metabolic process|0005975||IEA,rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224365.1;locus_tag=NLI98_RS24945;product=rhamnulokinase;protein_id=WP_023285681.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5164992 5166251 . + . ID=gene-NLI98_RS24950;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=protein_coding;locus_tag=NLI98_RS24950;old_locus_tag=NLI98_24940 NZ_CP100601.1 Protein Homology CDS 5164992 5166251 . + 0 ID=cds-WP_088497968.1;Parent=gene-NLI98_RS24950;Dbxref=Genbank:WP_088497968.1;Name=WP_088497968.1;Ontology_term=GO:0019301,GO:0008740;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224364.1;locus_tag=NLI98_RS24950;product=L-rhamnose isomerase;protein_id=WP_088497968.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5166401 5167231 . + . ID=gene-NLI98_RS24955;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=NLI98_RS24955;old_locus_tag=NLI98_24945 NZ_CP100601.1 Protein Homology CDS 5166401 5167231 . + 0 ID=cds-WP_004187188.1;Parent=gene-NLI98_RS24955;Dbxref=Genbank:WP_004187188.1;Name=WP_004187188.1;gbkey=CDS;gene=rhaD;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224363.1;locus_tag=NLI98_RS24955;product=rhamnulose-1-phosphate aldolase;protein_id=WP_004187188.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5167313 5168299 . + . ID=gene-NLI98_RS24960;Name=rhaS;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=NLI98_RS24960;old_locus_tag=NLI98_24950 NZ_CP100601.1 Protein Homology CDS 5167313 5168299 . + 0 ID=cds-WP_002882880.1;Parent=gene-NLI98_RS24960;Dbxref=Genbank:WP_002882880.1;Name=WP_002882880.1;Ontology_term=GO:0015762,GO:0015153,GO:0033296,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=rhaS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=rhamnose transmembrane transporter activity|0015153||IEA,rhamnose binding|0033296||IEA;go_process=rhamnose transmembrane transport|0015762||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224362.1;locus_tag=NLI98_RS24960;product=rhamnose ABC transporter substrate-binding protein;protein_id=WP_002882880.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5168445 5169956 . + . ID=gene-NLI98_RS24965;Name=NLI98_RS24965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24965;old_locus_tag=NLI98_24955 NZ_CP100601.1 Protein Homology CDS 5168445 5169956 . + 0 ID=cds-WP_004150373.1;Parent=gene-NLI98_RS24965;Dbxref=Genbank:WP_004150373.1;Name=WP_004150373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224361.1;locus_tag=NLI98_RS24965;product=sugar ABC transporter ATP-binding protein;protein_id=WP_004150373.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5169953 5170960 . + . ID=gene-NLI98_RS24970;Name=NLI98_RS24970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24970;old_locus_tag=NLI98_24960 NZ_CP100601.1 Protein Homology CDS 5169953 5170960 . + 0 ID=cds-WP_004181621.1;Parent=gene-NLI98_RS24970;Dbxref=Genbank:WP_004181621.1;Name=WP_004181621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224360.1;locus_tag=NLI98_RS24970;product=ABC transporter permease;protein_id=WP_004181621.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5170957 5171961 . + . ID=gene-NLI98_RS24975;Name=NLI98_RS24975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24975;old_locus_tag=NLI98_24965 NZ_CP100601.1 Protein Homology CDS 5170957 5171961 . + 0 ID=cds-WP_004181620.1;Parent=gene-NLI98_RS24975;Dbxref=Genbank:WP_004181620.1;Name=WP_004181620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224359.1;locus_tag=NLI98_RS24975;product=ABC transporter permease;protein_id=WP_004181620.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5172050 5173198 . + . ID=gene-NLI98_RS24980;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=NLI98_RS24980;old_locus_tag=NLI98_24970 NZ_CP100601.1 Protein Homology CDS 5172050 5173198 . + 0 ID=cds-WP_002882871.1;Parent=gene-NLI98_RS24980;Dbxref=Genbank:WP_002882871.1;Name=WP_002882871.1;Ontology_term=GO:0008912;gbkey=CDS;gene=fucO;go_function=lactaldehyde reductase activity|0008912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224358.1;locus_tag=NLI98_RS24980;product=lactaldehyde reductase;protein_id=WP_002882871.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5173195 5173509 . + . ID=gene-NLI98_RS24985;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=protein_coding;locus_tag=NLI98_RS24985;old_locus_tag=NLI98_24975 NZ_CP100601.1 Protein Homology CDS 5173195 5173509 . + 0 ID=cds-WP_021440964.1;Parent=gene-NLI98_RS24985;Dbxref=Genbank:WP_021440964.1;Name=WP_021440964.1;Ontology_term=GO:0019301,GO:0016857;gbkey=CDS;gene=rhaM;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224357.1;locus_tag=NLI98_RS24985;product=L-rhamnose mutarotase;protein_id=WP_021440964.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5173547 5174812 . - . ID=gene-NLI98_RS24990;Name=NLI98_RS24990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24990;old_locus_tag=NLI98_24980 NZ_CP100601.1 Protein Homology CDS 5173547 5174812 . - 0 ID=cds-WP_044246467.1;Parent=gene-NLI98_RS24990;Dbxref=Genbank:WP_044246467.1;Name=WP_044246467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224356.1;locus_tag=NLI98_RS24990;product=MFS transporter;protein_id=WP_044246467.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5174854 5176977 . - . ID=gene-NLI98_RS24995;Name=NLI98_RS24995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS24995;old_locus_tag=NLI98_24985 NZ_CP100601.1 Protein Homology CDS 5174854 5176977 . - 0 ID=cds-WP_004151861.1;Parent=gene-NLI98_RS24995;Dbxref=Genbank:WP_004151861.1;Name=WP_004151861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224355.1;locus_tag=NLI98_RS24995;product=alpha-galactosidase;protein_id=WP_004151861.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5177093 5178088 . - . ID=gene-NLI98_RS25000;Name=NLI98_RS25000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25000;old_locus_tag=NLI98_24990 NZ_CP100601.1 Protein Homology CDS 5177093 5178088 . - 0 ID=cds-WP_002882866.1;Parent=gene-NLI98_RS25000;Dbxref=Genbank:WP_002882866.1;Name=WP_002882866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224354.1;locus_tag=NLI98_RS25000;product=substrate-binding domain-containing protein;protein_id=WP_002882866.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5178176 5178724 . - . ID=gene-NLI98_RS25005;Name=NLI98_RS25005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25005;old_locus_tag=NLI98_24995 NZ_CP100601.1 Protein Homology CDS 5178176 5178724 . - 0 ID=cds-WP_002882865.1;Parent=gene-NLI98_RS25005;Dbxref=Genbank:WP_002882865.1;Name=WP_002882865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855902.1;locus_tag=NLI98_RS25005;product=XRE family transcriptional regulator;protein_id=WP_002882865.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5178824 5179483 . + . ID=gene-NLI98_RS25010;Name=NLI98_RS25010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25010;old_locus_tag=NLI98_25000 NZ_CP100601.1 Protein Homology CDS 5178824 5179483 . + 0 ID=cds-WP_004195589.1;Parent=gene-NLI98_RS25010;Dbxref=Genbank:WP_004195589.1;Name=WP_004195589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016831326.1;locus_tag=NLI98_RS25010;product=AzlC family ABC transporter permease;protein_id=WP_004195589.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5179483 5179806 . + . ID=gene-NLI98_RS25015;Name=NLI98_RS25015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25015;old_locus_tag=NLI98_25005 NZ_CP100601.1 Protein Homology CDS 5179483 5179806 . + 0 ID=cds-WP_031590611.1;Parent=gene-NLI98_RS25015;Dbxref=Genbank:WP_031590611.1;Name=WP_031590611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462921.1;locus_tag=NLI98_RS25015;product=AzlD domain-containing protein;protein_id=WP_031590611.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5179847 5180059 . - . ID=gene-NLI98_RS25020;Name=NLI98_RS25020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25020;old_locus_tag=NLI98_25010 NZ_CP100601.1 Protein Homology CDS 5179847 5180059 . - 0 ID=cds-WP_002882830.1;Parent=gene-NLI98_RS25020;Dbxref=Genbank:WP_002882830.1;Name=WP_002882830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224343.1;locus_tag=NLI98_RS25020;product=DUF1471 domain-containing protein;protein_id=WP_002882830.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5180188 5181024 . - . ID=gene-NLI98_RS25025;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=NLI98_RS25025;old_locus_tag=NLI98_25015 NZ_CP100601.1 Protein Homology CDS 5180188 5181024 . - 0 ID=cds-WP_002882828.1;Parent=gene-NLI98_RS25025;Dbxref=Genbank:WP_002882828.1;Name=WP_002882828.1;Ontology_term=GO:0009061,GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224342.1;locus_tag=NLI98_RS25025;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_002882828.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5181181 5184231 . + . ID=gene-NLI98_RS25030;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=NLI98_RS25030;old_locus_tag=NLI98_25020 NZ_CP100601.1 Protein Homology CDS 5181181 5184231 . + 0 ID=cds-WP_085921749.1;Parent=gene-NLI98_RS25030;Dbxref=Genbank:WP_085921749.1;Name=WP_085921749.1;Ontology_term=GO:0015942,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=NLI98_RS25030;product=formate dehydrogenase-N subunit alpha;protein_id=WP_085921749.1;transl_except=(pos:5181766..5181768%2Caa:Sec);transl_table=11 NZ_CP100601.1 RefSeq gene 5184244 5185146 . + . ID=gene-NLI98_RS25035;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=NLI98_RS25035;old_locus_tag=NLI98_25025 NZ_CP100601.1 Protein Homology CDS 5184244 5185146 . + 0 ID=cds-WP_002882822.1;Parent=gene-NLI98_RS25035;Dbxref=Genbank:WP_002882822.1;Name=WP_002882822.1;Ontology_term=GO:0045333,GO:0008863;gbkey=CDS;gene=fdxH;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=cellular respiration|0045333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224339.1;locus_tag=NLI98_RS25035;product=formate dehydrogenase subunit beta;protein_id=WP_002882822.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5185143 5185778 . + . ID=gene-NLI98_RS25040;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=NLI98_RS25040;old_locus_tag=NLI98_25030 NZ_CP100601.1 Protein Homology CDS 5185143 5185778 . + 0 ID=cds-WP_002882818.1;Parent=gene-NLI98_RS25040;Dbxref=Genbank:WP_002882818.1;Name=WP_002882818.1;gbkey=CDS;gene=fdoI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224338.1;locus_tag=NLI98_RS25040;product=formate dehydrogenase cytochrome b556 subunit;protein_id=WP_002882818.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5185775 5186704 . + . ID=gene-NLI98_RS25045;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=NLI98_RS25045;old_locus_tag=NLI98_25035 NZ_CP100601.1 Protein Homology CDS 5185775 5186704 . + 0 ID=cds-WP_004150358.1;Parent=gene-NLI98_RS25045;Dbxref=Genbank:WP_004150358.1;Name=WP_004150358.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121819.1;locus_tag=NLI98_RS25045;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_004150358.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5186878 5187261 . - . ID=gene-NLI98_RS25050;Name=NLI98_RS25050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25050;old_locus_tag=NLI98_25040 NZ_CP100601.1 Protein Homology CDS 5186878 5187261 . - 0 ID=cds-WP_002882817.1;Parent=gene-NLI98_RS25050;Dbxref=Genbank:WP_002882817.1;Name=WP_002882817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224336.1;locus_tag=NLI98_RS25050;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_002882817.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5187261 5187503 . - . ID=gene-NLI98_RS25055;Name=NLI98_RS25055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25055;old_locus_tag=NLI98_25045 NZ_CP100601.1 Protein Homology CDS 5187261 5187503 . - 0 ID=cds-WP_004150355.1;Parent=gene-NLI98_RS25055;Dbxref=Genbank:WP_004150355.1;Name=WP_004150355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224335.1;locus_tag=NLI98_RS25055;product=ribbon-helix-helix domain-containing protein;protein_id=WP_004150355.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5187708 5188625 . + . ID=gene-NLI98_RS25060;Name=NLI98_RS25060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25060;old_locus_tag=NLI98_25050 NZ_CP100601.1 Protein Homology CDS 5187708 5188625 . + 0 ID=cds-WP_088497967.1;Parent=gene-NLI98_RS25060;Dbxref=Genbank:WP_088497967.1;Name=WP_088497967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224334.1;locus_tag=NLI98_RS25060;product=alpha/beta hydrolase;protein_id=WP_088497967.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5188639 5189580 . - . ID=gene-NLI98_RS25065;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=NLI98_RS25065;old_locus_tag=NLI98_25055 NZ_CP100601.1 Protein Homology CDS 5188639 5189580 . - 0 ID=cds-WP_004178031.1;Parent=gene-NLI98_RS25065;Dbxref=Genbank:WP_004178031.1;Name=WP_004178031.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666856.1;locus_tag=NLI98_RS25065;product=fatty acid biosynthesis protein FabY;protein_id=WP_004178031.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5189625 5190062 . - . ID=gene-NLI98_RS25070;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=NLI98_RS25070;old_locus_tag=NLI98_25060 NZ_CP100601.1 Protein Homology CDS 5189625 5190062 . - 0 ID=cds-WP_002882809.1;Parent=gene-NLI98_RS25070;Dbxref=Genbank:WP_002882809.1;Name=WP_002882809.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000560980.1;locus_tag=NLI98_RS25070;product=D-aminoacyl-tRNA deacylase;protein_id=WP_002882809.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5190059 5190919 . - . ID=gene-NLI98_RS25075;Name=NLI98_RS25075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25075;old_locus_tag=NLI98_25065 NZ_CP100601.1 Protein Homology CDS 5190059 5190919 . - 0 ID=cds-WP_264452046.1;Parent=gene-NLI98_RS25075;Dbxref=Genbank:WP_264452046.1;Name=WP_264452046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004855862.1;locus_tag=NLI98_RS25075;product=virulence factor BrkB family protein;protein_id=WP_264452046.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5190913 5191512 . - . ID=gene-NLI98_RS25080;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=NLI98_RS25080;old_locus_tag=NLI98_25070 NZ_CP100601.1 Protein Homology CDS 5190913 5191512 . - 0 ID=cds-WP_004151865.1;Parent=gene-NLI98_RS25080;Dbxref=Genbank:WP_004151865.1;Name=WP_004151865.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224330.1;locus_tag=NLI98_RS25080;product=glucose-1-phosphatase;protein_id=WP_004151865.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5191648 5193471 . - . ID=gene-NLI98_RS25085;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=NLI98_RS25085;old_locus_tag=NLI98_25075 NZ_CP100601.1 Protein Homology CDS 5191648 5193471 . - 0 ID=cds-WP_002882755.1;Parent=gene-NLI98_RS25085;Dbxref=Genbank:WP_002882755.1;Name=WP_002882755.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224329.1;locus_tag=NLI98_RS25085;product=ribosome-dependent GTPase TypA;protein_id=WP_002882755.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5193850 5195259 . + . ID=gene-NLI98_RS25090;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=NLI98_RS25090;old_locus_tag=NLI98_25080 NZ_CP100601.1 Protein Homology CDS 5193850 5195259 . + 0 ID=cds-WP_002882753.1;Parent=gene-NLI98_RS25090;Dbxref=Genbank:WP_002882753.1;Name=WP_002882753.1;Ontology_term=GO:0006542,GO:0006807,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020233234.1;locus_tag=NLI98_RS25090;product=glutamate--ammonia ligase;protein_id=WP_002882753.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5195448 5196497 . + . ID=gene-NLI98_RS25095;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=NLI98_RS25095;old_locus_tag=NLI98_25085 NZ_CP100601.1 Protein Homology CDS 5195448 5196497 . + 0 ID=cds-WP_004146229.1;Parent=gene-NLI98_RS25095;Dbxref=Genbank:WP_004146229.1;Name=WP_004146229.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224326.1;locus_tag=NLI98_RS25095;product=nitrogen regulation protein NR(II);protein_id=WP_004146229.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5196506 5197915 . + . ID=gene-NLI98_RS25100;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=NLI98_RS25100;old_locus_tag=NLI98_25090 NZ_CP100601.1 Protein Homology CDS 5196506 5197915 . + 0 ID=cds-WP_002882749.1;Parent=gene-NLI98_RS25100;Dbxref=Genbank:WP_002882749.1;Name=WP_002882749.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133942.1;locus_tag=NLI98_RS25100;product=nitrogen regulation protein NR(I);protein_id=WP_002882749.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5198026 5198136 . + . ID=gene-NLI98_RS25105;Name=NLI98_RS25105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25105;old_locus_tag=NLI98_25095 NZ_CP100601.1 Protein Homology CDS 5198026 5198136 . + 0 ID=cds-WP_004152951.1;Parent=gene-NLI98_RS25105;Dbxref=Genbank:WP_004152951.1;Name=WP_004152951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001578131.1;locus_tag=NLI98_RS25105;product=YshB family small membrane protein;protein_id=WP_004152951.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5198172 5199545 . - . ID=gene-NLI98_RS25110;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=NLI98_RS25110;old_locus_tag=NLI98_25100 NZ_CP100601.1 Protein Homology CDS 5198172 5199545 . - 0 ID=cds-WP_088497966.1;Parent=gene-NLI98_RS25110;Dbxref=Genbank:WP_088497966.1;Name=WP_088497966.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemN;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224324.1;locus_tag=NLI98_RS25110;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_088497966.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5199734 5200240 . - . ID=gene-NLI98_RS25115;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=NLI98_RS25115;old_locus_tag=NLI98_25105 NZ_CP100601.1 Protein Homology CDS 5199734 5200240 . - 0 ID=cds-WP_004213384.1;Parent=gene-NLI98_RS25115;Dbxref=Genbank:WP_004213384.1;Name=WP_004213384.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224323.1;locus_tag=NLI98_RS25115;product=Der GTPase-activating protein YihI;protein_id=WP_004213384.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5200824 5201456 . + . ID=gene-NLI98_RS25120;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=NLI98_RS25120;old_locus_tag=NLI98_25110 NZ_CP100601.1 Protein Homology CDS 5200824 5201456 . + 0 ID=cds-WP_002882734.1;Parent=gene-NLI98_RS25120;Dbxref=Genbank:WP_002882734.1;Name=WP_002882734.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224322.1;locus_tag=NLI98_RS25120;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_002882734.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5201804 5204596 . - . ID=gene-NLI98_RS25125;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=NLI98_RS25125;old_locus_tag=NLI98_25115 NZ_CP100601.1 Protein Homology CDS 5201804 5204596 . - 0 ID=cds-WP_002882729.1;Parent=gene-NLI98_RS25125;Dbxref=Genbank:WP_002882729.1;Name=WP_002882729.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418300.1;locus_tag=NLI98_RS25125;product=DNA polymerase I;protein_id=WP_002882729.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5204993 5205892 . + . ID=gene-NLI98_RS25130;Name=NLI98_RS25130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25130;old_locus_tag=NLI98_25120 NZ_CP100601.1 Protein Homology CDS 5204993 5205892 . + 0 ID=cds-WP_004150336.1;Parent=gene-NLI98_RS25130;Dbxref=Genbank:WP_004150336.1;Name=WP_004150336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224320.1;locus_tag=NLI98_RS25130;product=acyltransferase;protein_id=WP_004150336.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5205941 5206564 . - . ID=gene-NLI98_RS25135;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=NLI98_RS25135;old_locus_tag=NLI98_25125 NZ_CP100601.1 Protein Homology CDS 5205941 5206564 . - 0 ID=cds-WP_004146224.1;Parent=gene-NLI98_RS25135;Dbxref=Genbank:WP_004146224.1;Name=WP_004146224.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224319.1;locus_tag=NLI98_RS25135;product=thiol:disulfide interchange protein DsbA;protein_id=WP_004146224.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5206592 5207578 . - . ID=gene-NLI98_RS25140;Name=NLI98_RS25140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25140;old_locus_tag=NLI98_25130 NZ_CP100601.1 Protein Homology CDS 5206592 5207578 . - 0 ID=cds-WP_004187940.1;Parent=gene-NLI98_RS25140;Dbxref=Genbank:WP_004187940.1;Name=WP_004187940.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224318.1;locus_tag=NLI98_RS25140;product=serine/threonine protein kinase;protein_id=WP_004187940.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5207654 5207923 . - . ID=gene-NLI98_RS25145;Name=NLI98_RS25145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25145;old_locus_tag=NLI98_25135 NZ_CP100601.1 Protein Homology CDS 5207654 5207923 . - 0 ID=cds-WP_002882612.1;Parent=gene-NLI98_RS25145;Dbxref=Genbank:WP_002882612.1;Name=WP_002882612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966571.1;locus_tag=NLI98_RS25145;product=YihD family protein;protein_id=WP_002882612.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5207995 5208576 . + . ID=gene-NLI98_RS25150;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=NLI98_RS25150;old_locus_tag=NLI98_25140 NZ_CP100601.1 Protein Homology CDS 5207995 5208576 . + 0 ID=cds-WP_004178039.1;Parent=gene-NLI98_RS25150;Dbxref=Genbank:WP_004178039.1;Name=WP_004178039.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224316.1;locus_tag=NLI98_RS25150;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_004178039.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5208573 5209079 . + . ID=gene-NLI98_RS25155;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=NLI98_RS25155;old_locus_tag=NLI98_25145 NZ_CP100601.1 Protein Homology CDS 5208573 5209079 . + 0 ID=cds-WP_088497965.1;Parent=gene-NLI98_RS25155;Dbxref=Genbank:WP_088497965.1;Name=WP_088497965.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224315.1;locus_tag=NLI98_RS25155;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_088497965.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5209446 5209561 . - . ID=gene-NLI98_RS25160;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=NLI98_RS25160;old_locus_tag=NLI98_25150 NZ_CP100601.1 cmsearch rRNA 5209446 5209561 . - . ID=rna-NLI98_RS25160;Parent=gene-NLI98_RS25160;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS25160;product=5S ribosomal RNA NZ_CP100601.1 cmsearch exon 5209446 5209561 . - . ID=exon-NLI98_RS25160-1;Parent=rna-NLI98_RS25160;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS25160;product=5S ribosomal RNA NZ_CP100601.1 RefSeq gene 5209659 5212560 . - . ID=gene-NLI98_RS25165;Name=NLI98_RS25165;gbkey=Gene;gene_biotype=rRNA;locus_tag=NLI98_RS25165;old_locus_tag=NLI98_25155 NZ_CP100601.1 cmsearch rRNA 5209659 5212560 . - . ID=rna-NLI98_RS25165;Parent=gene-NLI98_RS25165;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS25165;product=23S ribosomal RNA NZ_CP100601.1 cmsearch exon 5209659 5212560 . - . ID=exon-NLI98_RS25165-1;Parent=rna-NLI98_RS25165;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS25165;product=23S ribosomal RNA NZ_CP100601.1 RefSeq gene 5212743 5212818 . - . ID=gene-NLI98_RS25170;Name=NLI98_RS25170;gbkey=Gene;gene_biotype=tRNA;locus_tag=NLI98_RS25170;old_locus_tag=NLI98_25160 NZ_CP100601.1 tRNAscan-SE tRNA 5212743 5212818 . - . ID=rna-NLI98_RS25170;Parent=gene-NLI98_RS25170;anticodon=(pos:complement(5212782..5212784));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS25170;product=tRNA-Glu NZ_CP100601.1 tRNAscan-SE exon 5212743 5212818 . - . ID=exon-NLI98_RS25170-1;Parent=rna-NLI98_RS25170;anticodon=(pos:complement(5212782..5212784));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=NLI98_RS25170;product=tRNA-Glu NZ_CP100601.1 RefSeq gene 5212904 5214443 . - . ID=gene-NLI98_RS25175;Name=NLI98_RS25175;gbkey=Gene;gene_biotype=rRNA;locus_tag=NLI98_RS25175;old_locus_tag=NLI98_25165 NZ_CP100601.1 cmsearch rRNA 5212904 5214443 . - . ID=rna-NLI98_RS25175;Parent=gene-NLI98_RS25175;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS25175;product=16S ribosomal RNA NZ_CP100601.1 cmsearch exon 5212904 5214443 . - . ID=exon-NLI98_RS25175-1;Parent=rna-NLI98_RS25175;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=NLI98_RS25175;product=16S ribosomal RNA NZ_CP100601.1 RefSeq gene 5214920 5215621 . + . ID=gene-NLI98_RS25180;Name=NLI98_RS25180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25180;old_locus_tag=NLI98_25170 NZ_CP100601.1 Protein Homology CDS 5214920 5215621 . + 0 ID=cds-WP_002882540.1;Parent=gene-NLI98_RS25180;Dbxref=Genbank:WP_002882540.1;Name=WP_002882540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224314.1;locus_tag=NLI98_RS25180;product=FadR family transcriptional regulator;protein_id=WP_002882540.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5215634 5217031 . + . ID=gene-NLI98_RS25185;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=NLI98_RS25185;old_locus_tag=NLI98_25175 NZ_CP100601.1 Protein Homology CDS 5215634 5217031 . + 0 ID=cds-WP_002882539.1;Parent=gene-NLI98_RS25185;Dbxref=Genbank:WP_002882539.1;Name=WP_002882539.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224313.1;locus_tag=NLI98_RS25185;product=multidrug transporter subunit MdtD;protein_id=WP_002882539.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5217028 5218020 . - . ID=gene-NLI98_RS25190;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=NLI98_RS25190;old_locus_tag=NLI98_25180 NZ_CP100601.1 Protein Homology CDS 5217028 5218020 . - 0 ID=cds-WP_004187944.1;Parent=gene-NLI98_RS25190;Dbxref=Genbank:WP_004187944.1;Name=WP_004187944.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312722.1;locus_tag=NLI98_RS25190;product=ribose operon transcriptional repressor RbsR;protein_id=WP_004187944.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5218024 5218956 . - . ID=gene-NLI98_RS25195;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=NLI98_RS25195;old_locus_tag=NLI98_25185 NZ_CP100601.1 Protein Homology CDS 5218024 5218956 . - 0 ID=cds-WP_004173836.1;Parent=gene-NLI98_RS25195;Dbxref=Genbank:WP_004173836.1;Name=WP_004173836.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224311.1;locus_tag=NLI98_RS25195;product=ribokinase;protein_id=WP_004173836.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5219057 5219947 . - . ID=gene-NLI98_RS25200;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=NLI98_RS25200;old_locus_tag=NLI98_25190 NZ_CP100601.1 Protein Homology CDS 5219057 5219947 . - 0 ID=cds-WP_002882536.1;Parent=gene-NLI98_RS25200;Dbxref=Genbank:WP_002882536.1;Name=WP_002882536.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224310.1;locus_tag=NLI98_RS25200;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_002882536.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5219975 5220940 . - . ID=gene-NLI98_RS25205;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=NLI98_RS25205;old_locus_tag=NLI98_25195 NZ_CP100601.1 Protein Homology CDS 5219975 5220940 . - 0 ID=cds-WP_048288973.1;Parent=gene-NLI98_RS25205;Dbxref=Genbank:WP_048288973.1;Name=WP_048288973.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002882531.1;locus_tag=NLI98_RS25205;product=ribose ABC transporter permease;protein_id=WP_048288973.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5220946 5222451 . - . ID=gene-NLI98_RS25210;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=NLI98_RS25210;old_locus_tag=NLI98_25200 NZ_CP100601.1 Protein Homology CDS 5220946 5222451 . - 0 ID=cds-WP_002882529.1;Parent=gene-NLI98_RS25210;Dbxref=Genbank:WP_002882529.1;Name=WP_002882529.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224308.1;locus_tag=NLI98_RS25210;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_002882529.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5222462 5222881 . - . ID=gene-NLI98_RS25215;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=NLI98_RS25215;old_locus_tag=NLI98_25205 NZ_CP100601.1 Protein Homology CDS 5222462 5222881 . - 0 ID=cds-WP_002882527.1;Parent=gene-NLI98_RS25215;Dbxref=Genbank:WP_002882527.1;Name=WP_002882527.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224307.1;locus_tag=NLI98_RS25215;product=D-ribose pyranase;protein_id=WP_002882527.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5223067 5224935 . - . ID=gene-NLI98_RS25220;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;locus_tag=NLI98_RS25220;old_locus_tag=NLI98_25210 NZ_CP100601.1 Protein Homology CDS 5223067 5224935 . - 0 ID=cds-WP_002882520.1;Parent=gene-NLI98_RS25220;Dbxref=Genbank:WP_002882520.1;Name=WP_002882520.1;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;gene=kup;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000102304.1;locus_tag=NLI98_RS25220;product=low affinity potassium transporter Kup;protein_id=WP_002882520.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5225153 5226652 . + . ID=gene-NLI98_RS25225;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=NLI98_RS25225;old_locus_tag=NLI98_25215 NZ_CP100601.1 Protein Homology CDS 5225153 5226652 . + 0 ID=cds-WP_004151555.1;Parent=gene-NLI98_RS25225;Dbxref=Genbank:WP_004151555.1;Name=WP_004151555.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224305.1;locus_tag=NLI98_RS25225;product=ATPase RavA;protein_id=WP_004151555.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5226649 5228097 . + . ID=gene-NLI98_RS25230;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=NLI98_RS25230;old_locus_tag=NLI98_25220 NZ_CP100601.1 Protein Homology CDS 5226649 5228097 . + 0 ID=cds-WP_088498442.1;Parent=gene-NLI98_RS25230;Dbxref=Genbank:WP_088498442.1;Name=WP_088498442.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224304.1;locus_tag=NLI98_RS25230;product=ATPase RavA stimulator ViaA;protein_id=WP_088498442.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5228101 5229093 . - . ID=gene-NLI98_RS25235;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=NLI98_RS25235;old_locus_tag=NLI98_25225 NZ_CP100601.1 Protein Homology CDS 5228101 5229093 . - 0 ID=cds-WP_002882514.1;Parent=gene-NLI98_RS25235;Dbxref=Genbank:WP_002882514.1;Name=WP_002882514.1;Ontology_term=GO:0006529,GO:0004071;gbkey=CDS;gene=asnA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224303.1;locus_tag=NLI98_RS25235;product=aspartate--ammonia ligase;protein_id=WP_002882514.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5229245 5229703 . + . ID=gene-NLI98_RS25240;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=NLI98_RS25240;old_locus_tag=NLI98_25230 NZ_CP100601.1 Protein Homology CDS 5229245 5229703 . + 0 ID=cds-WP_002882510.1;Parent=gene-NLI98_RS25240;Dbxref=Genbank:WP_002882510.1;Name=WP_002882510.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224302.1;locus_tag=NLI98_RS25240;product=transcriptional regulator AsnC;protein_id=WP_002882510.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5229803 5230243 . + . ID=gene-NLI98_RS25245;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=NLI98_RS25245;old_locus_tag=NLI98_25235 NZ_CP100601.1 Protein Homology CDS 5229803 5230243 . + 0 ID=cds-WP_004144988.1;Parent=gene-NLI98_RS25245;Dbxref=Genbank:WP_004144988.1;Name=WP_004144988.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224301.1;locus_tag=NLI98_RS25245;product=FMN-binding protein MioC;protein_id=WP_004144988.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5230625 5232514 . + . ID=gene-NLI98_RS25250;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=NLI98_RS25250;old_locus_tag=NLI98_25240 NZ_CP100601.1 Protein Homology CDS 5230625 5232514 . + 0 ID=cds-WP_065810524.1;Parent=gene-NLI98_RS25250;Dbxref=Genbank:WP_065810524.1;Name=WP_065810524.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000499793.1;locus_tag=NLI98_RS25250;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_065810524.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5232630 5233253 . + . ID=gene-NLI98_RS25255;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=NLI98_RS25255;old_locus_tag=NLI98_25245 NZ_CP100601.1 Protein Homology CDS 5232630 5233253 . + 0 ID=cds-WP_004151554.1;Parent=gene-NLI98_RS25255;Dbxref=Genbank:WP_004151554.1;Name=WP_004151554.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229615.1;locus_tag=NLI98_RS25255;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_004151554.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5233870 5234250 . + . ID=gene-NLI98_RS25260;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=NLI98_RS25260;old_locus_tag=NLI98_25250 NZ_CP100601.1 Protein Homology CDS 5233870 5234250 . + 0 ID=cds-WP_004144991.1;Parent=gene-NLI98_RS25260;Dbxref=Genbank:WP_004144991.1;Name=WP_004144991.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229614.1;locus_tag=NLI98_RS25260;product=F0F1 ATP synthase subunit I;protein_id=WP_004144991.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5234258 5235073 . + . ID=gene-NLI98_RS25265;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=NLI98_RS25265;old_locus_tag=NLI98_25255 NZ_CP100601.1 Protein Homology CDS 5234258 5235073 . + 0 ID=cds-WP_004173838.1;Parent=gene-NLI98_RS25265;Dbxref=Genbank:WP_004173838.1;Name=WP_004173838.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121454.1;locus_tag=NLI98_RS25265;product=F0F1 ATP synthase subunit A;protein_id=WP_004173838.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5235123 5235362 . + . ID=gene-NLI98_RS25270;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=NLI98_RS25270;old_locus_tag=NLI98_25260 NZ_CP100601.1 Protein Homology CDS 5235123 5235362 . + 0 ID=cds-WP_000429386.1;Parent=gene-NLI98_RS25270;Dbxref=Genbank:WP_000429386.1;Name=WP_000429386.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=NLI98_RS25270;product=F0F1 ATP synthase subunit C;protein_id=WP_000429386.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5235413 5235883 . + . ID=gene-NLI98_RS25275;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=NLI98_RS25275;old_locus_tag=NLI98_25265 NZ_CP100601.1 Protein Homology CDS 5235413 5235883 . + 0 ID=cds-WP_004107293.1;Parent=gene-NLI98_RS25275;Dbxref=Genbank:WP_004107293.1;Name=WP_004107293.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=NLI98_RS25275;product=F0F1 ATP synthase subunit B;protein_id=WP_004107293.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5235898 5236431 . + . ID=gene-NLI98_RS25280;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=NLI98_RS25280;old_locus_tag=NLI98_25270 NZ_CP100601.1 Protein Homology CDS 5235898 5236431 . + 0 ID=cds-WP_004144994.1;Parent=gene-NLI98_RS25280;Dbxref=Genbank:WP_004144994.1;Name=WP_004144994.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015966593.1;locus_tag=NLI98_RS25280;product=F0F1 ATP synthase subunit delta;protein_id=WP_004144994.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5236444 5237985 . + . ID=gene-NLI98_RS25285;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=NLI98_RS25285;old_locus_tag=NLI98_25275 NZ_CP100601.1 Protein Homology CDS 5236444 5237985 . + 0 ID=cds-WP_004144995.1;Parent=gene-NLI98_RS25285;Dbxref=Genbank:WP_004144995.1;Name=WP_004144995.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=NLI98_RS25285;product=F0F1 ATP synthase subunit alpha;protein_id=WP_004144995.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5238036 5238899 . + . ID=gene-NLI98_RS25290;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=NLI98_RS25290;old_locus_tag=NLI98_25280 NZ_CP100601.1 Protein Homology CDS 5238036 5238899 . + 0 ID=cds-WP_004144996.1;Parent=gene-NLI98_RS25290;Dbxref=Genbank:WP_004144996.1;Name=WP_004144996.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=NLI98_RS25290;product=F0F1 ATP synthase subunit gamma;protein_id=WP_004144996.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5238926 5240308 . + . ID=gene-NLI98_RS25295;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=NLI98_RS25295;old_locus_tag=NLI98_25285 NZ_CP100601.1 Protein Homology CDS 5238926 5240308 . + 0 ID=cds-WP_004144997.1;Parent=gene-NLI98_RS25295;Dbxref=Genbank:WP_004144997.1;Name=WP_004144997.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017800291.1;locus_tag=NLI98_RS25295;product=F0F1 ATP synthase subunit beta;protein_id=WP_004144997.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5240329 5240748 . + . ID=gene-NLI98_RS25300;Name=NLI98_RS25300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25300;old_locus_tag=NLI98_25290 NZ_CP100601.1 Protein Homology CDS 5240329 5240748 . + 0 ID=cds-WP_001251971.1;Parent=gene-NLI98_RS25300;Dbxref=Genbank:WP_001251971.1;Name=WP_001251971.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001251972.1;locus_tag=NLI98_RS25300;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_001251971.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5241445 5242815 . + . ID=gene-NLI98_RS25305;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=NLI98_RS25305;old_locus_tag=NLI98_25295 NZ_CP100601.1 Protein Homology CDS 5241445 5242815 . + 0 ID=cds-WP_088498443.1;Parent=gene-NLI98_RS25305;Dbxref=Genbank:WP_088498443.1;Name=WP_088498443.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229602.1;locus_tag=NLI98_RS25305;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_088498443.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5242999 5244828 . + . ID=gene-NLI98_RS25310;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=NLI98_RS25310;old_locus_tag=NLI98_25300 NZ_CP100601.1 Protein Homology CDS 5242999 5244828 . + 0 ID=cds-WP_004150309.1;Parent=gene-NLI98_RS25310;Dbxref=Genbank:WP_004150309.1;Name=WP_004150309.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=NLI98_RS25310;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_004150309.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5245165 5246205 . + . ID=gene-NLI98_RS25315;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=NLI98_RS25315;old_locus_tag=NLI98_25305 NZ_CP100601.1 Protein Homology CDS 5245165 5246205 . + 0 ID=cds-WP_004150308.1;Parent=gene-NLI98_RS25315;Dbxref=Genbank:WP_004150308.1;Name=WP_004150308.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229600.1;locus_tag=NLI98_RS25315;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_004150308.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5246334 5247293 . + . ID=gene-NLI98_RS25320;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=NLI98_RS25320;old_locus_tag=NLI98_25310 NZ_CP100601.1 Protein Homology CDS 5246334 5247293 . + 0 ID=cds-WP_004145004.1;Parent=gene-NLI98_RS25320;Dbxref=Genbank:WP_004145004.1;Name=WP_004145004.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806729.1;locus_tag=NLI98_RS25320;product=phosphate ABC transporter permease PstC;protein_id=WP_004145004.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5247293 5248183 . + . ID=gene-NLI98_RS25325;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=NLI98_RS25325;old_locus_tag=NLI98_25315 NZ_CP100601.1 Protein Homology CDS 5247293 5248183 . + 0 ID=cds-WP_004151547.1;Parent=gene-NLI98_RS25325;Dbxref=Genbank:WP_004151547.1;Name=WP_004151547.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229598.1;locus_tag=NLI98_RS25325;product=phosphate ABC transporter permease PstA;protein_id=WP_004151547.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5248231 5249004 . + . ID=gene-NLI98_RS25330;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=NLI98_RS25330;old_locus_tag=NLI98_25320 NZ_CP100601.1 Protein Homology CDS 5248231 5249004 . + 0 ID=cds-WP_004145006.1;Parent=gene-NLI98_RS25330;Dbxref=Genbank:WP_004145006.1;Name=WP_004145006.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000063125.1;locus_tag=NLI98_RS25330;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_004145006.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5249055 5249780 . + . ID=gene-NLI98_RS25335;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=NLI98_RS25335;old_locus_tag=NLI98_25325 NZ_CP100601.1 Protein Homology CDS 5249055 5249780 . + 0 ID=cds-WP_004145007.1;Parent=gene-NLI98_RS25335;Dbxref=Genbank:WP_004145007.1;Name=WP_004145007.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=cellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229596.1;locus_tag=NLI98_RS25335;product=phosphate signaling complex protein PhoU;protein_id=WP_004145007.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5250258 5251892 . + . ID=gene-NLI98_RS25340;Name=NLI98_RS25340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25340;old_locus_tag=NLI98_25330 NZ_CP100601.1 Protein Homology CDS 5250258 5251892 . + 0 ID=cds-WP_071068286.1;Parent=gene-NLI98_RS25340;Dbxref=Genbank:WP_071068286.1;Name=WP_071068286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229594.1;locus_tag=NLI98_RS25340;product=carbohydrate porin;protein_id=WP_071068286.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5251931 5253097 . + . ID=gene-NLI98_RS25345;Name=NLI98_RS25345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25345;old_locus_tag=NLI98_25335 NZ_CP100601.1 Protein Homology CDS 5251931 5253097 . + 0 ID=cds-WP_004145104.1;Parent=gene-NLI98_RS25345;Dbxref=Genbank:WP_004145104.1;Name=WP_004145104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946150.1;locus_tag=NLI98_RS25345;product=alpha/beta hydrolase-fold protein;protein_id=WP_004145104.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5253147 5253866 . + . ID=gene-NLI98_RS25350;Name=NLI98_RS25350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25350;old_locus_tag=NLI98_25340 NZ_CP100601.1 Protein Homology CDS 5253147 5253866 . + 0 ID=cds-WP_004901614.1;Parent=gene-NLI98_RS25350;Dbxref=Genbank:WP_004901614.1;Name=WP_004901614.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229591.1;locus_tag=NLI98_RS25350;product=glucosamine-6-phosphate deaminase;protein_id=WP_004901614.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5253946 5254611 . - . ID=gene-NLI98_RS25355;Name=yieH;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=NLI98_RS25355;old_locus_tag=NLI98_25345 NZ_CP100601.1 Protein Homology CDS 5253946 5254611 . - 0 ID=cds-WP_004145102.1;Parent=gene-NLI98_RS25355;Dbxref=Genbank:WP_004145102.1;Name=WP_004145102.1;gbkey=CDS;gene=yieH;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229590.1;locus_tag=NLI98_RS25355;product=6-phosphogluconate phosphatase;protein_id=WP_004145102.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5254781 5256118 . + . ID=gene-NLI98_RS25360;Name=NLI98_RS25360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25360;old_locus_tag=NLI98_25350 NZ_CP100601.1 Protein Homology CDS 5254781 5256118 . + 0 ID=cds-WP_004145100.1;Parent=gene-NLI98_RS25360;Dbxref=Genbank:WP_004145100.1;Name=WP_004145100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229588.1;locus_tag=NLI98_RS25360;product=NCS2 family permease;protein_id=WP_004145100.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5256164 5256730 . - . ID=gene-NLI98_RS25365;Name=NLI98_RS25365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25365;old_locus_tag=NLI98_25355 NZ_CP100601.1 Protein Homology CDS 5256164 5256730 . - 0 ID=cds-WP_004151543.1;Parent=gene-NLI98_RS25365;Dbxref=Genbank:WP_004151543.1;Name=WP_004151543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229587.1;locus_tag=NLI98_RS25365;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_004151543.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5256767 5257342 . - . ID=gene-NLI98_RS25370;Name=NLI98_RS25370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25370;old_locus_tag=NLI98_25360 NZ_CP100601.1 Protein Homology CDS 5256767 5257342 . - 0 ID=cds-WP_004145098.1;Parent=gene-NLI98_RS25370;Dbxref=Genbank:WP_004145098.1;Name=WP_004145098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229586.1;locus_tag=NLI98_RS25370;product=hypothetical protein;protein_id=WP_004145098.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5257652 5258611 . - . ID=gene-NLI98_RS25375;Name=yidZ;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=NLI98_RS25375;old_locus_tag=NLI98_25365 NZ_CP100601.1 Protein Homology CDS 5257652 5258611 . - 0 ID=cds-WP_004181599.1;Parent=gene-NLI98_RS25375;Dbxref=Genbank:WP_004181599.1;Name=WP_004181599.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yidZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229585.1;locus_tag=NLI98_RS25375;product=HTH-type transcriptional regulator YidZ;protein_id=WP_004181599.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5258586 5259764 . - . ID=gene-NLI98_RS25380;Name=NLI98_RS25380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25380;old_locus_tag=NLI98_25370 NZ_CP100601.1 Protein Homology CDS 5258586 5259764 . - 0 ID=cds-WP_004151540.1;Parent=gene-NLI98_RS25380;Dbxref=Genbank:WP_004151540.1;Name=WP_004151540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229584.1;locus_tag=NLI98_RS25380;product=MFS transporter;protein_id=WP_004151540.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5259864 5260283 . - . ID=gene-NLI98_RS25385;Name=NLI98_RS25385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25385;old_locus_tag=NLI98_25375 NZ_CP100601.1 Protein Homology CDS 5259864 5260283 . - 0 ID=cds-WP_004151539.1;Parent=gene-NLI98_RS25385;Dbxref=Genbank:WP_004151539.1;Name=WP_004151539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229583.1;locus_tag=NLI98_RS25385;product=GNAT family N-acetyltransferase;protein_id=WP_004151539.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5260403 5261767 . - . ID=gene-NLI98_RS25390;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=NLI98_RS25390;old_locus_tag=NLI98_25380 NZ_CP100601.1 Protein Homology CDS 5260403 5261767 . - 0 ID=cds-WP_004151538.1;Parent=gene-NLI98_RS25390;Dbxref=Genbank:WP_004151538.1;Name=WP_004151538.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462743.1;locus_tag=NLI98_RS25390;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_004151538.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5261962 5263608 . - . ID=gene-NLI98_RS25395;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=NLI98_RS25395;old_locus_tag=NLI98_25385 NZ_CP100601.1 Protein Homology CDS 5261962 5263608 . - 0 ID=cds-WP_004150295.1;Parent=gene-NLI98_RS25395;Dbxref=Genbank:WP_004150295.1;Name=WP_004150295.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462742.1;locus_tag=NLI98_RS25395;product=membrane protein insertase YidC;protein_id=WP_004150295.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5263611 5263868 . - . ID=gene-NLI98_RS25400;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=NLI98_RS25400;old_locus_tag=NLI98_25390 NZ_CP100601.1 Protein Homology CDS 5263611 5263868 . - 0 ID=cds-WP_004151536.1;Parent=gene-NLI98_RS25400;Dbxref=Genbank:WP_004151536.1;Name=WP_004151536.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462741.1;locus_tag=NLI98_RS25400;product=membrane protein insertion efficiency factor YidD;protein_id=WP_004151536.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5263832 5264191 . - . ID=gene-NLI98_RS25405;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=NLI98_RS25405;old_locus_tag=NLI98_25395 NZ_CP100601.1 Protein Homology CDS 5263832 5264191 . - 0 ID=cds-WP_004151535.1;Parent=gene-NLI98_RS25405;Dbxref=Genbank:WP_004151535.1;Name=WP_004151535.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014172301.1;locus_tag=NLI98_RS25405;product=ribonuclease P protein component;protein_id=WP_004151535.1;transl_table=11 NZ_CP100601.1 RefSeq gene 5264207 5264347 . - . ID=gene-NLI98_RS25410;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=NLI98_RS25410;old_locus_tag=NLI98_25400 NZ_CP100601.1 Protein Homology CDS 5264207 5264347 . - 0 ID=cds-WP_000831330.1;Parent=gene-NLI98_RS25410;Dbxref=Genbank:WP_000831330.1;Name=WP_000831330.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1;locus_tag=NLI98_RS25410;product=50S ribosomal protein L34;protein_id=WP_000831330.1;transl_table=11 ##sequence-region NZ_CP100602.1 1 222562 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=573 NZ_CP100602.1 RefSeq region 1 222562 . + . ID=NZ_CP100602.1:1..222562;Dbxref=taxon:573;Is_circular=true;Name=pwx17388plas;collected-by=hu renjing;collection-date=2017-12-21;country=China:jiangsu;gbkey=Src;genome=plasmid;genotype=K16;isolation-source=Pus;lat-lon=31.57 N 120.30 E;mol_type=genomic DNA;nat-host=Homo sapiens;plasmid-name=pwx17388plas;strain=WX17388 NZ_CP100602.1 RefSeq gene 1 1011 . + . ID=gene-NLI98_RS25415;Name=NLI98_RS25415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25415;old_locus_tag=NLI98_25405 NZ_CP100602.1 Protein Homology CDS 1 1011 . + 0 ID=cds-WP_004211839.1;Parent=gene-NLI98_RS25415;Dbxref=Genbank:WP_004211839.1;Name=WP_004211839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900946.1;locus_tag=NLI98_RS25415;product=replication initiation protein;protein_id=WP_004211839.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 1833 2573 . - . ID=gene-NLI98_RS25420;Name=NLI98_RS25420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS25420;old_locus_tag=NLI98_25410;pseudo=true NZ_CP100602.1 Protein Homology CDS 1833 2573 . - 0 ID=cds-NLI98_RS25420;Parent=gene-NLI98_RS25420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540156.1;locus_tag=NLI98_RS25420;product=site-specific integrase;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 2921 3194 . + . ID=gene-NLI98_RS25425;Name=NLI98_RS25425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS25425;old_locus_tag=NLI98_25415;partial=true;pseudo=true;start_range=.,2921 NZ_CP100602.1 Protein Homology CDS 2921 3194 . + 0 ID=cds-NLI98_RS25425;Parent=gene-NLI98_RS25425;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611340.1;locus_tag=NLI98_RS25425;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,2921;transl_table=11 NZ_CP100602.1 RefSeq gene 3331 3867 . - . ID=gene-NLI98_RS25430;Name=NLI98_RS25430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25430;old_locus_tag=NLI98_25420 NZ_CP100602.1 Protein Homology CDS 3331 3867 . - 0 ID=cds-WP_004211835.1;Parent=gene-NLI98_RS25430;Dbxref=Genbank:WP_004211835.1;Name=WP_004211835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004117808.1;locus_tag=NLI98_RS25430;product=hypothetical protein;protein_id=WP_004211835.1;transl_table=11 NZ_CP100602.1 RefSeq gene 4078 5146 . - . ID=gene-NLI98_RS25435;Name=NLI98_RS25435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25435;old_locus_tag=NLI98_25425 NZ_CP100602.1 Protein Homology CDS 4923 5146 . - 0 ID=cds-WP_223271235.1;Parent=gene-NLI98_RS25435;Dbxref=Genbank:WP_223271235.1;Name=WP_223271235.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=NLI98_RS25435;product=IS3 family transposase;protein_id=WP_223271235.1;transl_table=11 NZ_CP100602.1 Protein Homology CDS 4078 4924 . - 1 ID=cds-WP_223271235.1;Parent=gene-NLI98_RS25435;Dbxref=Genbank:WP_223271235.1;Name=WP_223271235.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1;locus_tag=NLI98_RS25435;product=IS3 family transposase;protein_id=WP_223271235.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 5599 6621 . + . ID=gene-NLI98_RS25440;Name=istA;gbkey=Gene;gene=istA;gene_biotype=pseudogene;locus_tag=NLI98_RS25440;old_locus_tag=NLI98_25430;pseudo=true NZ_CP100602.1 Protein Homology CDS 5599 6621 . + 0 ID=cds-NLI98_RS25440;Parent=gene-NLI98_RS25440;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=istA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000627495.1;locus_tag=NLI98_RS25440;product=IS21 family transposase;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq gene 6618 7400 . + . ID=gene-NLI98_RS25445;Name=istB;gbkey=Gene;gene=istB;gene_biotype=protein_coding;locus_tag=NLI98_RS25445;old_locus_tag=NLI98_25435 NZ_CP100602.1 Protein Homology CDS 6618 7400 . + 0 ID=cds-WP_004214667.1;Parent=gene-NLI98_RS25445;Dbxref=Genbank:WP_004214667.1;Name=WP_004214667.1;gbkey=CDS;gene=istB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001531258.1;locus_tag=NLI98_RS25445;product=IS21-like element ISSen3 family helper ATPase IstB;protein_id=WP_004214667.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 7466 8115 . - . ID=gene-NLI98_RS25450;Name=NLI98_RS25450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS25450;old_locus_tag=NLI98_25440;partial=true;pseudo=true;start_range=.,7466 NZ_CP100602.1 Protein Homology CDS 7466 8115 . - 0 ID=cds-NLI98_RS25450;Parent=gene-NLI98_RS25450;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611474.1;locus_tag=NLI98_RS25450;partial=true;product=transposase;pseudo=true;start_range=.,7466;transl_table=11 NZ_CP100602.1 RefSeq gene 8184 8690 . - . ID=gene-NLI98_RS25455;Name=NLI98_RS25455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25455;old_locus_tag=NLI98_25445 NZ_CP100602.1 Protein Homology CDS 8184 8690 . - 0 ID=cds-WP_011154530.1;Parent=gene-NLI98_RS25455;Dbxref=Genbank:WP_011154530.1;Name=WP_011154530.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020387.2;locus_tag=NLI98_RS25455;product=RES domain-containing protein;protein_id=WP_011154530.1;transl_table=11 NZ_CP100602.1 RefSeq gene 8671 8793 . - . ID=gene-NLI98_RS25460;Name=NLI98_RS25460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25460;old_locus_tag=NLI98_25450 NZ_CP100602.1 Protein Homology CDS 8671 8793 . - 0 ID=cds-WP_226323909.1;Parent=gene-NLI98_RS25460;Dbxref=Genbank:WP_226323909.1;Name=WP_226323909.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020387.2;locus_tag=NLI98_RS25460;product=RES domain-containing protein;protein_id=WP_226323909.1;transl_table=11 NZ_CP100602.1 RefSeq gene 8754 9254 . - . ID=gene-NLI98_RS25465;Name=NLI98_RS25465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25465;old_locus_tag=NLI98_25455 NZ_CP100602.1 Protein Homology CDS 8754 9254 . - 0 ID=cds-WP_004214674.1;Parent=gene-NLI98_RS25465;Dbxref=Genbank:WP_004214674.1;Name=WP_004214674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902335.1;locus_tag=NLI98_RS25465;product=hypothetical protein;protein_id=WP_004214674.1;transl_table=11 NZ_CP100602.1 RefSeq gene 9427 9750 . - . ID=gene-NLI98_RS25470;Name=NLI98_RS25470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25470;old_locus_tag=NLI98_25460 NZ_CP100602.1 Protein Homology CDS 9427 9750 . - 0 ID=cds-WP_004902338.1;Parent=gene-NLI98_RS25470;Dbxref=Genbank:WP_004902338.1;Name=WP_004902338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902338.1;locus_tag=NLI98_RS25470;product=hypothetical protein;protein_id=WP_004902338.1;transl_table=11 NZ_CP100602.1 RefSeq gene 9747 10184 . - . ID=gene-NLI98_RS25475;Name=NLI98_RS25475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25475;old_locus_tag=NLI98_25465 NZ_CP100602.1 Protein Homology CDS 9747 10184 . - 0 ID=cds-WP_088498386.1;Parent=gene-NLI98_RS25475;Dbxref=Genbank:WP_088498386.1;Name=WP_088498386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000843282.1;locus_tag=NLI98_RS25475;product=hypothetical protein;protein_id=WP_088498386.1;transl_table=11 NZ_CP100602.1 RefSeq gene 10184 11215 . - . ID=gene-NLI98_RS25480;Name=NLI98_RS25480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25480;old_locus_tag=NLI98_25470 NZ_CP100602.1 Protein Homology CDS 10184 11215 . - 0 ID=cds-WP_004902347.1;Parent=gene-NLI98_RS25480;Dbxref=Genbank:WP_004902347.1;Name=WP_004902347.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902347.1;locus_tag=NLI98_RS25480;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_004902347.1;transl_table=11 NZ_CP100602.1 RefSeq gene 11215 12081 . - . ID=gene-NLI98_RS25485;Name=NLI98_RS25485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25485;old_locus_tag=NLI98_25475 NZ_CP100602.1 Protein Homology CDS 11215 12081 . - 0 ID=cds-WP_011251296.1;Parent=gene-NLI98_RS25485;Dbxref=Genbank:WP_011251296.1;Name=WP_011251296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016247547.1;locus_tag=NLI98_RS25485;product=AAA family ATPase;protein_id=WP_011251296.1;transl_table=11 NZ_CP100602.1 RefSeq gene 12605 12850 . - . ID=gene-NLI98_RS25490;Name=NLI98_RS25490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25490;old_locus_tag=NLI98_25480 NZ_CP100602.1 Protein Homology CDS 12605 12850 . - 0 ID=cds-WP_011251294.1;Parent=gene-NLI98_RS25490;Dbxref=Genbank:WP_011251294.1;Name=WP_011251294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902354.1;locus_tag=NLI98_RS25490;product=molecular chaperone DnaJ;protein_id=WP_011251294.1;transl_table=11 NZ_CP100602.1 RefSeq gene 13039 14364 . + . ID=gene-NLI98_RS25495;Name=NLI98_RS25495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25495;old_locus_tag=NLI98_25485 NZ_CP100602.1 GeneMarkS-2+ CDS 13039 14364 . + 0 ID=cds-WP_011154534.1;Parent=gene-NLI98_RS25495;Dbxref=Genbank:WP_011154534.1;Name=WP_011154534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS25495;product=hypothetical protein;protein_id=WP_011154534.1;transl_table=11 NZ_CP100602.1 RefSeq gene 14436 14729 . + . ID=gene-NLI98_RS25500;Name=NLI98_RS25500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25500;old_locus_tag=NLI98_25490 NZ_CP100602.1 GeneMarkS-2+ CDS 14436 14729 . + 0 ID=cds-WP_225367826.1;Parent=gene-NLI98_RS25500;Dbxref=Genbank:WP_225367826.1;Name=WP_225367826.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS25500;product=hypothetical protein;protein_id=WP_225367826.1;transl_table=11 NZ_CP100602.1 RefSeq gene 14747 15715 . + . ID=gene-NLI98_RS25505;Name=NLI98_RS25505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25505;old_locus_tag=NLI98_25495 NZ_CP100602.1 Protein Homology CDS 14747 15715 . + 0 ID=cds-WP_004225014.1;Parent=gene-NLI98_RS25505;Dbxref=Genbank:WP_004225014.1;Name=WP_004225014.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=NLI98_RS25505;product=IS5 family transposase;protein_id=WP_004225014.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 15773 15922 . + . ID=gene-NLI98_RS25510;Name=NLI98_RS25510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS25510;old_locus_tag=NLI98_25500;partial=true;pseudo=true;start_range=.,15773 NZ_CP100602.1 Protein Homology CDS 15773 15922 . + 0 ID=cds-NLI98_RS25510;Parent=gene-NLI98_RS25510;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=NLI98_RS25510;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,15773;transl_table=11 NZ_CP100602.1 RefSeq gene 16154 16564 . + . ID=gene-NLI98_RS25515;Name=NLI98_RS25515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25515;old_locus_tag=NLI98_25505 NZ_CP100602.1 Protein Homology CDS 16154 16564 . + 0 ID=cds-WP_004026379.1;Parent=gene-NLI98_RS25515;Dbxref=Genbank:WP_004026379.1;Name=WP_004026379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026379.1;locus_tag=NLI98_RS25515;product=hypothetical protein;protein_id=WP_004026379.1;transl_table=11 NZ_CP100602.1 RefSeq gene 16616 17104 . + . ID=gene-NLI98_RS25520;Name=NLI98_RS25520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25520;old_locus_tag=NLI98_25510 NZ_CP100602.1 Protein Homology CDS 16616 17104 . + 0 ID=cds-WP_004902361.1;Parent=gene-NLI98_RS25520;Dbxref=Genbank:WP_004902361.1;Name=WP_004902361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902361.1;locus_tag=NLI98_RS25520;product=hypothetical protein;protein_id=WP_004902361.1;transl_table=11 NZ_CP100602.1 RefSeq gene 17189 17602 . + . ID=gene-NLI98_RS25525;Name=NLI98_RS25525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25525;old_locus_tag=NLI98_25515 NZ_CP100602.1 Protein Homology CDS 17189 17602 . + 0 ID=cds-WP_004902363.1;Parent=gene-NLI98_RS25525;Dbxref=Genbank:WP_004902363.1;Name=WP_004902363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197660.1;locus_tag=NLI98_RS25525;product=hypothetical protein;protein_id=WP_004902363.1;transl_table=11 NZ_CP100602.1 RefSeq gene 17665 18456 . + . ID=gene-NLI98_RS25530;Name=NLI98_RS25530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25530;old_locus_tag=NLI98_25520 NZ_CP100602.1 Protein Homology CDS 17665 18456 . + 0 ID=cds-WP_029884223.1;Parent=gene-NLI98_RS25530;Dbxref=Genbank:WP_029884223.1;Name=WP_029884223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197663.1;locus_tag=NLI98_RS25530;product=hypothetical protein;protein_id=WP_029884223.1;transl_table=11 NZ_CP100602.1 RefSeq gene 18459 19025 . + . ID=gene-NLI98_RS25535;Name=NLI98_RS25535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25535;old_locus_tag=NLI98_25525 NZ_CP100602.1 Protein Homology CDS 18459 19025 . + 0 ID=cds-WP_004902370.1;Parent=gene-NLI98_RS25535;Dbxref=Genbank:WP_004902370.1;Name=WP_004902370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026372.1;locus_tag=NLI98_RS25535;product=type I-E CRISPR-associated protein Cas6/Cse3/CasE;protein_id=WP_004902370.1;transl_table=11 NZ_CP100602.1 RefSeq gene 19028 19990 . + . ID=gene-NLI98_RS25540;Name=NLI98_RS25540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25540;old_locus_tag=NLI98_25530 NZ_CP100602.1 Protein Homology CDS 19028 19990 . + 0 ID=cds-WP_004902373.1;Parent=gene-NLI98_RS25540;Dbxref=Genbank:WP_004902373.1;Name=WP_004902373.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902373.1;locus_tag=NLI98_RS25540;product=DEAD/DEAH box helicase;protein_id=WP_004902373.1;transl_table=11 NZ_CP100602.1 RefSeq gene 20134 20457 . + . ID=gene-NLI98_RS25545;Name=NLI98_RS25545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25545;old_locus_tag=NLI98_25535 NZ_CP100602.1 Protein Homology CDS 20134 20457 . + 0 ID=cds-WP_004902375.1;Parent=gene-NLI98_RS25545;Dbxref=Genbank:WP_004902375.1;Name=WP_004902375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902375.1;locus_tag=NLI98_RS25545;product=hypothetical protein;protein_id=WP_004902375.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 20606 21294 . + . ID=gene-NLI98_RS25550;Name=NLI98_RS25550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS25550;old_locus_tag=NLI98_25540;pseudo=true NZ_CP100602.1 Protein Homology CDS 20606 21294 . + 0 ID=cds-NLI98_RS25550;Parent=gene-NLI98_RS25550;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012477181.1;locus_tag=NLI98_RS25550;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 21305 21571 . + . ID=gene-NLI98_RS25555;Name=NLI98_RS25555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS25555;old_locus_tag=NLI98_25545;partial=true;pseudo=true;start_range=.,21305 NZ_CP100602.1 Protein Homology CDS 21305 21571 . + 0 ID=cds-NLI98_RS25555;Parent=gene-NLI98_RS25555;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012767745.1;locus_tag=NLI98_RS25555;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,21305;transl_table=11 NZ_CP100602.1 RefSeq gene 21641 22294 . - . ID=gene-NLI98_RS25560;Name=NLI98_RS25560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25560;old_locus_tag=NLI98_25550 NZ_CP100602.1 Protein Homology CDS 21641 22294 . - 0 ID=cds-WP_023302796.1;Parent=gene-NLI98_RS25560;Dbxref=Genbank:WP_023302796.1;Name=WP_023302796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011251259.1;locus_tag=NLI98_RS25560;product=class I SAM-dependent methyltransferase;protein_id=WP_023302796.1;transl_table=11 NZ_CP100602.1 RefSeq gene 22836 23468 . + . ID=gene-NLI98_RS25565;Name=rmpA;gbkey=Gene;gene=rmpA;gene_biotype=protein_coding;locus_tag=NLI98_RS25565;old_locus_tag=NLI98_25555 NZ_CP100602.1 Protein Homology CDS 22836 23468 . + 0 ID=cds-WP_004213609.1;Parent=gene-NLI98_RS25565;Dbxref=Genbank:WP_004213609.1;Name=WP_004213609.1;gbkey=CDS;gene=rmpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213609.1;locus_tag=NLI98_RS25565;product=mucoid phenotype regulator RmpA;protein_id=WP_004213609.1;transl_table=11 NZ_CP100602.1 RefSeq gene 23524 23646 . + . ID=gene-NLI98_RS25570;Name=rmpD;gbkey=Gene;gene=rmpD;gene_biotype=protein_coding;locus_tag=NLI98_RS25570;old_locus_tag=NLI98_25560 NZ_CP100602.1 Protein Homology CDS 23524 23646 . + 0 ID=cds-WP_242461985.1;Parent=gene-NLI98_RS25570;Dbxref=Genbank:WP_242461985.1;Name=WP_242461985.1;gbkey=CDS;gene=rmpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_213034833.1;locus_tag=NLI98_RS25570;product=mucoid phenotype synthesis protein RmpD;protein_id=WP_242461985.1;transl_table=11 NZ_CP100602.1 RefSeq gene 23999 24400 . + . ID=gene-NLI98_RS25575;Name=rmpC;gbkey=Gene;gene=rmpC;gene_biotype=protein_coding;locus_tag=NLI98_RS25575;old_locus_tag=NLI98_25565 NZ_CP100602.1 Protein Homology CDS 23999 24400 . + 0 ID=cds-WP_214588034.1;Parent=gene-NLI98_RS25575;Dbxref=Genbank:WP_214588034.1;Name=WP_214588034.1;gbkey=CDS;gene=rmpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_213034832.1;locus_tag=NLI98_RS25575;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_214588034.1;transl_table=11 NZ_CP100602.1 RefSeq gene 24473 25375 . + . ID=gene-NLI98_RS25580;Name=NLI98_RS25580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25580;old_locus_tag=NLI98_25570 NZ_CP100602.1 Protein Homology CDS 24473 25375 . + 0 ID=cds-WP_004213613.1;Parent=gene-NLI98_RS25580;Dbxref=Genbank:WP_004213613.1;Name=WP_004213613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529495.1;locus_tag=NLI98_RS25580;product=DMT family transporter;protein_id=WP_004213613.1;transl_table=11 NZ_CP100602.1 RefSeq gene 25518 25739 . - . ID=gene-NLI98_RS25585;Name=NLI98_RS25585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25585;old_locus_tag=NLI98_25575 NZ_CP100602.1 Protein Homology CDS 25518 25739 . - 0 ID=cds-WP_004213615.1;Parent=gene-NLI98_RS25585;Dbxref=Genbank:WP_004213615.1;Name=WP_004213615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144043.1;locus_tag=NLI98_RS25585;product=hypothetical protein;protein_id=WP_004213615.1;transl_table=11 NZ_CP100602.1 RefSeq gene 25801 27975 . - . ID=gene-NLI98_RS25590;Name=iroN;gbkey=Gene;gene=iroN;gene_biotype=protein_coding;locus_tag=NLI98_RS25590;old_locus_tag=NLI98_25580 NZ_CP100602.1 Protein Homology CDS 25801 27975 . - 0 ID=cds-WP_004213617.1;Parent=gene-NLI98_RS25590;Dbxref=Genbank:WP_004213617.1;Name=WP_004213617.1;gbkey=CDS;gene=iroN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902397.1;locus_tag=NLI98_RS25590;product=siderophore salmochelin receptor IroN;protein_id=WP_004213617.1;transl_table=11 NZ_CP100602.1 RefSeq gene 28435 29664 . - . ID=gene-NLI98_RS25595;Name=iroD;gbkey=Gene;gene=iroD;gene_biotype=protein_coding;locus_tag=NLI98_RS25595;old_locus_tag=NLI98_25585 NZ_CP100602.1 Protein Homology CDS 28435 29664 . - 0 ID=cds-WP_004902400.1;Parent=gene-NLI98_RS25595;Dbxref=Genbank:WP_004902400.1;Name=WP_004902400.1;gbkey=CDS;gene=iroD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015874982.1;locus_tag=NLI98_RS25595;product=catecholate siderophore esterase IroD;protein_id=WP_004902400.1;transl_table=11 NZ_CP100602.1 RefSeq gene 29769 33413 . - . ID=gene-NLI98_RS25600;Name=iroC;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=NLI98_RS25600;old_locus_tag=NLI98_25590 NZ_CP100602.1 Protein Homology CDS 29769 33413 . - 0 ID=cds-WP_029884226.1;Parent=gene-NLI98_RS25600;Dbxref=Genbank:WP_029884226.1;Name=WP_029884226.1;gbkey=CDS;gene=iroC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011251260.1;locus_tag=NLI98_RS25600;product=salmochelin/enterobactin export ABC transporter IroC;protein_id=WP_029884226.1;transl_table=11 NZ_CP100602.1 RefSeq gene 33556 34671 . - . ID=gene-NLI98_RS25605;Name=iroB;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=NLI98_RS25605;old_locus_tag=NLI98_25595 NZ_CP100602.1 Protein Homology CDS 33556 34671 . - 0 ID=cds-WP_004213623.1;Parent=gene-NLI98_RS25605;Dbxref=Genbank:WP_004213623.1;Name=WP_004213623.1;gbkey=CDS;gene=iroB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461700.1;locus_tag=NLI98_RS25605;product=salmochelin biosynthesis C-glycosyltransferase IroB;protein_id=WP_004213623.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 34768 34979 . - . ID=gene-NLI98_RS25610;Name=NLI98_RS25610;end_range=34979,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS25610;old_locus_tag=NLI98_25600;partial=true;pseudo=true;start_range=.,34768 NZ_CP100602.1 Protein Homology CDS 34768 34979 . - 0 ID=cds-NLI98_RS25610;Parent=gene-NLI98_RS25610;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=34979,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000219087.1;locus_tag=NLI98_RS25610;partial=true;product=IS110 family transposase;pseudo=true;start_range=.,34768;transl_table=11 NZ_CP100602.1 RefSeq gene 35021 35665 . - . ID=gene-NLI98_RS25615;Name=NLI98_RS25615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25615;old_locus_tag=NLI98_25605 NZ_CP100602.1 Protein Homology CDS 35021 35665 . - 0 ID=cds-WP_004213626.1;Parent=gene-NLI98_RS25615;Dbxref=Genbank:WP_004213626.1;Name=WP_004213626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309414.1;locus_tag=NLI98_RS25615;product=ParB N-terminal domain-containing protein;protein_id=WP_004213626.1;transl_table=11 NZ_CP100602.1 RefSeq gene 35650 36882 . - . ID=gene-NLI98_RS25620;Name=NLI98_RS25620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25620;old_locus_tag=NLI98_25610 NZ_CP100602.1 Protein Homology CDS 35650 36882 . - 0 ID=cds-WP_004213628.1;Parent=gene-NLI98_RS25620;Dbxref=Genbank:WP_004213628.1;Name=WP_004213628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001083460.1;locus_tag=NLI98_RS25620;product=phosphoadenosine phosphosulfate reductase;protein_id=WP_004213628.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 37025 37231 . - . ID=gene-NLI98_RS25625;Name=NLI98_RS25625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS25625;old_locus_tag=NLI98_25615;partial=true;pseudo=true;start_range=.,37025 NZ_CP100602.1 Protein Homology CDS 37025 37231 . - 0 ID=cds-NLI98_RS25625;Parent=gene-NLI98_RS25625;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000080195.1;locus_tag=NLI98_RS25625;partial=true;product=IS66 family transposase;pseudo=true;start_range=.,37025;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 37339 37545 . - . ID=gene-NLI98_RS25630;Name=NLI98_RS25630;end_range=37545,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS25630;old_locus_tag=NLI98_25620;partial=true;pseudo=true NZ_CP100602.1 Protein Homology CDS 37339 37545 . - 0 ID=cds-NLI98_RS25630;Parent=gene-NLI98_RS25630;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=37545,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558235.1;locus_tag=NLI98_RS25630;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq gene 37769 38290 . + . ID=gene-NLI98_RS25635;Name=NLI98_RS25635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25635;old_locus_tag=NLI98_25625 NZ_CP100602.1 Protein Homology CDS 37769 38290 . + 0 ID=cds-WP_004213635.1;Parent=gene-NLI98_RS25635;Dbxref=Genbank:WP_004213635.1;Name=WP_004213635.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418713.1;locus_tag=NLI98_RS25635;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_004213635.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 38287 39240 . + . ID=gene-NLI98_RS25640;Name=fecR;gbkey=Gene;gene=fecR;gene_biotype=pseudogene;locus_tag=NLI98_RS25640;old_locus_tag=NLI98_25630;pseudo=true NZ_CP100602.1 Protein Homology CDS 38287 39240 . + 0 ID=cds-NLI98_RS25640;Parent=gene-NLI98_RS25640;Note=internal stop;gbkey=CDS;gene=fecR;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418712.1;locus_tag=NLI98_RS25640;product=fec operon regulator FecR;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq gene 39327 41453 . + . ID=gene-NLI98_RS25645;Name=NLI98_RS25645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25645;old_locus_tag=NLI98_25635 NZ_CP100602.1 Protein Homology CDS 39327 41453 . + 0 ID=cds-WP_004213640.1;Parent=gene-NLI98_RS25645;Dbxref=Genbank:WP_004213640.1;Name=WP_004213640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418711.1;locus_tag=NLI98_RS25645;product=TonB-dependent receptor family protein;protein_id=WP_004213640.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 41528 41647 . + . ID=gene-NLI98_RS25650;Name=NLI98_RS25650;end_range=41647,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS25650;old_locus_tag=NLI98_25640;partial=true;pseudo=true NZ_CP100602.1 Protein Homology CDS 41528 41647 . + 0 ID=cds-NLI98_RS25650;Parent=gene-NLI98_RS25650;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=41647,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000879155.1;locus_tag=NLI98_RS25650;partial=true;product=Fe3+-citrate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq gene 41828 42049 . + . ID=gene-NLI98_RS25655;Name=NLI98_RS25655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25655;old_locus_tag=NLI98_25645 NZ_CP100602.1 Protein Homology CDS 41828 42049 . + 0 ID=cds-WP_004213643.1;Parent=gene-NLI98_RS25655;Dbxref=Genbank:WP_004213643.1;Name=WP_004213643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213643.1;locus_tag=NLI98_RS25655;product=DUF2188 domain-containing protein;protein_id=WP_004213643.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 42147 42650 . + . ID=gene-NLI98_RS25660;Name=NLI98_RS25660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS25660;old_locus_tag=NLI98_25650;partial=true;pseudo=true;start_range=.,42147 NZ_CP100602.1 Protein Homology CDS 42147 42650 . + 0 ID=cds-NLI98_RS25660;Parent=gene-NLI98_RS25660;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181894.1;locus_tag=NLI98_RS25660;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,42147;transl_table=11 NZ_CP100602.1 RefSeq gene 42751 43194 . + . ID=gene-NLI98_RS25665;Name=NLI98_RS25665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25665;old_locus_tag=NLI98_25655 NZ_CP100602.1 Protein Homology CDS 42751 43194 . + 0 ID=cds-WP_004026357.1;Parent=gene-NLI98_RS25665;Dbxref=Genbank:WP_004026357.1;Name=WP_004026357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181895.1;locus_tag=NLI98_RS25665;product=DUF2384 domain-containing protein;protein_id=WP_004026357.1;transl_table=11 NZ_CP100602.1 RefSeq gene 43191 43661 . + . ID=gene-NLI98_RS25670;Name=NLI98_RS25670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25670;old_locus_tag=NLI98_25660 NZ_CP100602.1 Protein Homology CDS 43191 43661 . + 0 ID=cds-WP_004026354.1;Parent=gene-NLI98_RS25670;Dbxref=Genbank:WP_004026354.1;Name=WP_004026354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144067.1;locus_tag=NLI98_RS25670;product=RES family NAD+ phosphorylase;protein_id=WP_004026354.1;transl_table=11 NZ_CP100602.1 RefSeq gene 44175 44872 . + . ID=gene-NLI98_RS25675;Name=NLI98_RS25675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25675;old_locus_tag=NLI98_25665 NZ_CP100602.1 Protein Homology CDS 44175 44424 . + 0 ID=cds-WP_223175001.1;Parent=gene-NLI98_RS25675;Dbxref=Genbank:WP_223175001.1;Name=WP_223175001.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=NLI98_RS25675;product=IS1-like element IS1A family transposase;protein_id=WP_223175001.1;transl_table=11 NZ_CP100602.1 Protein Homology CDS 44424 44872 . + 2 ID=cds-WP_223175001.1;Parent=gene-NLI98_RS25675;Dbxref=Genbank:WP_223175001.1;Name=WP_223175001.1;Note=programmed frameshift;exception=ribosomal slippage;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001743396.1;locus_tag=NLI98_RS25675;product=IS1-like element IS1A family transposase;protein_id=WP_223175001.1;transl_table=11 NZ_CP100602.1 RefSeq gene 46258 46908 . - . ID=gene-NLI98_RS25680;Name=NLI98_RS25680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25680;old_locus_tag=NLI98_25670 NZ_CP100602.1 Protein Homology CDS 46258 46908 . - 0 ID=cds-WP_068893702.1;Parent=gene-NLI98_RS25680;Dbxref=Genbank:WP_068893702.1;Name=WP_068893702.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018381.2;locus_tag=NLI98_RS25680;product=DUF1173 family protein;protein_id=WP_068893702.1;transl_table=11 NZ_CP100602.1 RefSeq gene 46941 47207 . - . ID=gene-NLI98_RS25685;Name=NLI98_RS25685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25685;old_locus_tag=NLI98_25675 NZ_CP100602.1 Protein Homology CDS 46941 47207 . - 0 ID=cds-WP_223175074.1;Parent=gene-NLI98_RS25685;Dbxref=Genbank:WP_223175074.1;Name=WP_223175074.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018381.2;locus_tag=NLI98_RS25685;product=DUF1173 family protein;protein_id=WP_223175074.1;transl_table=11 NZ_CP100602.1 RefSeq gene 47385 47879 . + . ID=gene-NLI98_RS25690;Name=NLI98_RS25690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25690;old_locus_tag=NLI98_25680 NZ_CP100602.1 Protein Homology CDS 47385 47879 . + 0 ID=cds-WP_004212794.1;Parent=gene-NLI98_RS25690;Dbxref=Genbank:WP_004212794.1;Name=WP_004212794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212794.1;locus_tag=NLI98_RS25690;product=thermonuclease family protein;protein_id=WP_004212794.1;transl_table=11 NZ_CP100602.1 RefSeq gene 48216 48614 . + . ID=gene-NLI98_RS25695;Name=NLI98_RS25695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25695;old_locus_tag=NLI98_25685 NZ_CP100602.1 Protein Homology CDS 48216 48614 . + 0 ID=cds-WP_004212796.1;Parent=gene-NLI98_RS25695;Dbxref=Genbank:WP_004212796.1;Name=WP_004212796.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910103.1;locus_tag=NLI98_RS25695;product=H-NS histone family protein;protein_id=WP_004212796.1;transl_table=11 NZ_CP100602.1 RefSeq gene 48932 49771 . - . ID=gene-NLI98_RS25700;Name=NLI98_RS25700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25700;old_locus_tag=NLI98_25690 NZ_CP100602.1 Protein Homology CDS 48932 49771 . - 0 ID=cds-WP_004212797.1;Parent=gene-NLI98_RS25700;Dbxref=Genbank:WP_004212797.1;Name=WP_004212797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212797.1;locus_tag=NLI98_RS25700;product=aldo/keto reductase;protein_id=WP_004212797.1;transl_table=11 NZ_CP100602.1 RefSeq gene 49768 50247 . - . ID=gene-NLI98_RS25705;Name=NLI98_RS25705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25705;old_locus_tag=NLI98_25695 NZ_CP100602.1 Protein Homology CDS 49768 50247 . - 0 ID=cds-WP_004212799.1;Parent=gene-NLI98_RS25705;Dbxref=Genbank:WP_004212799.1;Name=WP_004212799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212799.1;locus_tag=NLI98_RS25705;product=cyclophilin-like fold protein;protein_id=WP_004212799.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 50385 50549 . + . ID=gene-NLI98_RS25710;Name=NLI98_RS25710;end_range=50549,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS25710;old_locus_tag=NLI98_25700;partial=true;pseudo=true;start_range=.,50385 NZ_CP100602.1 Protein Homology CDS 50385 50549 . + 0 ID=cds-NLI98_RS25710;Parent=gene-NLI98_RS25710;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=50549,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611683.1;locus_tag=NLI98_RS25710;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,50385;transl_table=11 NZ_CP100602.1 RefSeq gene 50832 51062 . - . ID=gene-NLI98_RS25715;Name=NLI98_RS25715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25715;old_locus_tag=NLI98_25705 NZ_CP100602.1 Protein Homology CDS 50832 51062 . - 0 ID=cds-WP_011154571.1;Parent=gene-NLI98_RS25715;Dbxref=Genbank:WP_011154571.1;Name=WP_011154571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144492.1;locus_tag=NLI98_RS25715;product=hypothetical protein;protein_id=WP_011154571.1;transl_table=11 NZ_CP100602.1 RefSeq gene 51248 53023 . - . ID=gene-NLI98_RS25720;Name=NLI98_RS25720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25720;old_locus_tag=NLI98_25710 NZ_CP100602.1 Protein Homology CDS 51248 53023 . - 0 ID=cds-WP_004212803.1;Parent=gene-NLI98_RS25720;Dbxref=Genbank:WP_004212803.1;Name=WP_004212803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212803.1;locus_tag=NLI98_RS25720;product=ABC transporter permease subunit;protein_id=WP_004212803.1;transl_table=11 NZ_CP100602.1 RefSeq gene 53042 54568 . - . ID=gene-NLI98_RS25725;Name=NLI98_RS25725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25725;old_locus_tag=NLI98_25715 NZ_CP100602.1 Protein Homology CDS 53042 54568 . - 0 ID=cds-WP_004212804.1;Parent=gene-NLI98_RS25725;Dbxref=Genbank:WP_004212804.1;Name=WP_004212804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212804.1;locus_tag=NLI98_RS25725;product=ABC transporter substrate-binding protein;protein_id=WP_004212804.1;transl_table=11 NZ_CP100602.1 RefSeq gene 54579 55823 . - . ID=gene-NLI98_RS25730;Name=NLI98_RS25730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25730;old_locus_tag=NLI98_25720 NZ_CP100602.1 Protein Homology CDS 54579 55823 . - 0 ID=cds-WP_004212807.1;Parent=gene-NLI98_RS25730;Dbxref=Genbank:WP_004212807.1;Name=WP_004212807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212807.1;locus_tag=NLI98_RS25730;product=MFS transporter;protein_id=WP_004212807.1;transl_table=11 NZ_CP100602.1 RefSeq gene 55850 56683 . - . ID=gene-NLI98_RS25735;Name=NLI98_RS25735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25735;old_locus_tag=NLI98_25725 NZ_CP100602.1 Protein Homology CDS 55850 56683 . - 0 ID=cds-WP_088498162.1;Parent=gene-NLI98_RS25735;Dbxref=Genbank:WP_088498162.1;Name=WP_088498162.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212808.1;locus_tag=NLI98_RS25735;product=ABC transporter ATP-binding protein;protein_id=WP_088498162.1;transl_table=11 NZ_CP100602.1 RefSeq gene 56680 57489 . - . ID=gene-NLI98_RS25740;Name=NLI98_RS25740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25740;old_locus_tag=NLI98_25730 NZ_CP100602.1 Protein Homology CDS 56680 57489 . - 0 ID=cds-WP_011154569.1;Parent=gene-NLI98_RS25740;Dbxref=Genbank:WP_011154569.1;Name=WP_011154569.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144485.1;locus_tag=NLI98_RS25740;product=ATP-binding cassette domain-containing protein;protein_id=WP_011154569.1;transl_table=11 NZ_CP100602.1 RefSeq gene 57675 58643 . - . ID=gene-NLI98_RS25745;Name=NLI98_RS25745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25745;old_locus_tag=NLI98_25735 NZ_CP100602.1 Protein Homology CDS 57675 58643 . - 0 ID=cds-WP_004225014.1-2;Parent=gene-NLI98_RS25745;Dbxref=Genbank:WP_004225014.1;Name=WP_004225014.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=NLI98_RS25745;product=IS5 family transposase;protein_id=WP_004225014.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 58678 59136 . + . ID=gene-NLI98_RS25750;Name=NLI98_RS25750;end_range=59136,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS25750;old_locus_tag=NLI98_25740;partial=true;pseudo=true;start_range=.,58678 NZ_CP100602.1 Protein Homology CDS 58678 59136 . + 0 ID=cds-NLI98_RS25750;Parent=gene-NLI98_RS25750;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016787;end_range=59136,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003156117.1;locus_tag=NLI98_RS25750;partial=true;product=M20/M25/M40 family metallo-hydrolase;pseudo=true;start_range=.,58678;transl_table=11 NZ_CP100602.1 RefSeq gene 59483 60451 . + . ID=gene-NLI98_RS25755;Name=NLI98_RS25755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25755;old_locus_tag=NLI98_25745 NZ_CP100602.1 Protein Homology CDS 59483 60451 . + 0 ID=cds-WP_004225014.1-3;Parent=gene-NLI98_RS25755;Dbxref=Genbank:WP_004225014.1;Name=WP_004225014.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=NLI98_RS25755;product=IS5 family transposase;protein_id=WP_004225014.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 60566 60733 . - . ID=gene-NLI98_RS25760;Name=NLI98_RS25760;end_range=60733,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS25760;old_locus_tag=NLI98_25750;partial=true;pseudo=true NZ_CP100602.1 Protein Homology CDS 60566 60733 . - 0 ID=cds-NLI98_RS25760;Parent=gene-NLI98_RS25760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=60733,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558263.1;locus_tag=NLI98_RS25760;partial=true;product=IS1 family transposase;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq gene 61037 61966 . + . ID=gene-NLI98_RS25765;Name=NLI98_RS25765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25765;old_locus_tag=NLI98_25755 NZ_CP100602.1 Protein Homology CDS 61037 61966 . + 0 ID=cds-WP_004213558.1;Parent=gene-NLI98_RS25765;Dbxref=Genbank:WP_004213558.1;Name=WP_004213558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_490541.1;locus_tag=NLI98_RS25765;product=Rpn family recombination-promoting nuclease/putative transposase;protein_id=WP_004213558.1;transl_table=11 NZ_CP100602.1 RefSeq gene 62111 62890 . - . ID=gene-NLI98_RS25770;Name=NLI98_RS25770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25770;old_locus_tag=NLI98_25760 NZ_CP100602.1 Protein Homology CDS 62111 62890 . - 0 ID=cds-WP_004213560.1;Parent=gene-NLI98_RS25770;Dbxref=Genbank:WP_004213560.1;Name=WP_004213560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229620.1;locus_tag=NLI98_RS25770;product=site-specific integrase;protein_id=WP_004213560.1;transl_table=11 NZ_CP100602.1 RefSeq gene 62887 63708 . - . ID=gene-NLI98_RS25775;Name=NLI98_RS25775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25775;old_locus_tag=NLI98_25765 NZ_CP100602.1 Protein Homology CDS 62887 63708 . - 0 ID=cds-WP_004213562.1;Parent=gene-NLI98_RS25775;Dbxref=Genbank:WP_004213562.1;Name=WP_004213562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020805487.1;locus_tag=NLI98_RS25775;product=hypothetical protein;protein_id=WP_004213562.1;transl_table=11 NZ_CP100602.1 RefSeq gene 64632 65606 . - . ID=gene-NLI98_RS25780;Name=NLI98_RS25780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25780;old_locus_tag=NLI98_25770 NZ_CP100602.1 Protein Homology CDS 64632 65606 . - 0 ID=cds-WP_004213565.1;Parent=gene-NLI98_RS25780;Dbxref=Genbank:WP_004213565.1;Name=WP_004213565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213565.1;locus_tag=NLI98_RS25780;product=sensor domain-containing diguanylate cyclase;protein_id=WP_004213565.1;transl_table=11 NZ_CP100602.1 RefSeq gene 66243 67151 . + . ID=gene-NLI98_RS25785;Name=NLI98_RS25785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25785;old_locus_tag=NLI98_25775 NZ_CP100602.1 Protein Homology CDS 66243 67151 . + 0 ID=cds-WP_023302803.1;Parent=gene-NLI98_RS25785;Dbxref=Genbank:WP_023302803.1;Name=WP_023302803.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001372261.1;locus_tag=NLI98_RS25785;product=HNH endonuclease;protein_id=WP_023302803.1;transl_table=11 NZ_CP100602.1 RefSeq gene 67538 67888 . - . ID=gene-NLI98_RS25790;Name=NLI98_RS25790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25790;old_locus_tag=NLI98_25780 NZ_CP100602.1 Protein Homology CDS 67538 67888 . - 0 ID=cds-WP_004213569.1;Parent=gene-NLI98_RS25790;Dbxref=Genbank:WP_004213569.1;Name=WP_004213569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000647571.1;locus_tag=NLI98_RS25790;product=DUF305 domain-containing protein;protein_id=WP_004213569.1;transl_table=11 NZ_CP100602.1 RefSeq gene 68032 68463 . - . ID=gene-NLI98_RS25795;Name=silE;gbkey=Gene;gene=silE;gene_biotype=protein_coding;locus_tag=NLI98_RS25795;old_locus_tag=NLI98_25785 NZ_CP100602.1 Protein Homology CDS 68032 68463 . - 0 ID=cds-WP_023302802.1;Parent=gene-NLI98_RS25795;Dbxref=Genbank:WP_023302802.1;Name=WP_023302802.1;gbkey=CDS;gene=silE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000790485.1;locus_tag=NLI98_RS25795;product=silver-binding protein SilE;protein_id=WP_023302802.1;transl_table=11 NZ_CP100602.1 RefSeq gene 68714 70189 . - . ID=gene-NLI98_RS25800;Name=silS;gbkey=Gene;gene=silS;gene_biotype=protein_coding;locus_tag=NLI98_RS25800;old_locus_tag=NLI98_25790 NZ_CP100602.1 Protein Homology CDS 68714 70189 . - 0 ID=cds-WP_000555737.1;Parent=gene-NLI98_RS25800;Dbxref=Genbank:WP_000555737.1;Name=WP_000555737.1;gbkey=CDS;gene=silS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032875.1;locus_tag=NLI98_RS25800;product=copper/silver sensor histidine kinase SilS;protein_id=WP_000555737.1;transl_table=11 NZ_CP100602.1 RefSeq gene 70182 70862 . - . ID=gene-NLI98_RS25805;Name=silR;gbkey=Gene;gene=silR;gene_biotype=protein_coding;locus_tag=NLI98_RS25805;old_locus_tag=NLI98_25795 NZ_CP100602.1 Protein Homology CDS 70182 70862 . - 0 ID=cds-WP_004213574.1;Parent=gene-NLI98_RS25805;Dbxref=Genbank:WP_004213574.1;Name=WP_004213574.1;gbkey=CDS;gene=silR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572351.1;locus_tag=NLI98_RS25805;product=copper/silver response regulator transcription factor SilR;protein_id=WP_004213574.1;transl_table=11 NZ_CP100602.1 RefSeq gene 71052 72437 . + . ID=gene-NLI98_RS25810;Name=silC;gbkey=Gene;gene=silC;gene_biotype=protein_coding;locus_tag=NLI98_RS25810;old_locus_tag=NLI98_25800 NZ_CP100602.1 Protein Homology CDS 71052 72437 . + 0 ID=cds-WP_004213577.1;Parent=gene-NLI98_RS25810;Dbxref=Genbank:WP_004213577.1;Name=WP_004213577.1;gbkey=CDS;gene=silC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001572989.1;locus_tag=NLI98_RS25810;product=Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC;protein_id=WP_004213577.1;transl_table=11 NZ_CP100602.1 RefSeq gene 72466 72828 . + . ID=gene-NLI98_RS25815;Name=cusF;gbkey=Gene;gene=cusF;gene_biotype=protein_coding;locus_tag=NLI98_RS25815;old_locus_tag=NLI98_25805 NZ_CP100602.1 Protein Homology CDS 72466 72828 . + 0 ID=cds-WP_004213578.1;Parent=gene-NLI98_RS25815;Dbxref=Genbank:WP_004213578.1;Name=WP_004213578.1;gbkey=CDS;gene=cusF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009654303.1;locus_tag=NLI98_RS25815;product=cation efflux system protein CusF;protein_id=WP_004213578.1;transl_table=11 NZ_CP100602.1 RefSeq gene 72942 74234 . + . ID=gene-NLI98_RS25820;Name=silB;gbkey=Gene;gene=silB;gene_biotype=protein_coding;locus_tag=NLI98_RS25820;old_locus_tag=NLI98_25810 NZ_CP100602.1 Protein Homology CDS 72942 74234 . + 0 ID=cds-WP_004213579.1;Parent=gene-NLI98_RS25820;Dbxref=Genbank:WP_004213579.1;Name=WP_004213579.1;gbkey=CDS;gene=silB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017146627.1;locus_tag=NLI98_RS25820;product=Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB;protein_id=WP_004213579.1;transl_table=11 NZ_CP100602.1 RefSeq gene 74245 77391 . + . ID=gene-NLI98_RS25825;Name=silA;gbkey=Gene;gene=silA;gene_biotype=protein_coding;locus_tag=NLI98_RS25825;old_locus_tag=NLI98_25815 NZ_CP100602.1 Protein Homology CDS 74245 77391 . + 0 ID=cds-WP_004098958.1;Parent=gene-NLI98_RS25825;Dbxref=Genbank:WP_004098958.1;Name=WP_004098958.1;gbkey=CDS;gene=silA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011711636.1;locus_tag=NLI98_RS25825;product=Cu(+)/Ag(+) efflux RND transporter permease subunit SilA;protein_id=WP_004098958.1;transl_table=11 NZ_CP100602.1 RefSeq gene 77478 77918 . + . ID=gene-NLI98_RS25830;Name=NLI98_RS25830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25830;old_locus_tag=NLI98_25820 NZ_CP100602.1 Protein Homology CDS 77478 77918 . + 0 ID=cds-WP_000758228.1;Parent=gene-NLI98_RS25830;Dbxref=Genbank:WP_000758228.1;Name=WP_000758228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436620.1;locus_tag=NLI98_RS25830;product=hypothetical protein;protein_id=WP_000758228.1;transl_table=11 NZ_CP100602.1 RefSeq gene 78045 80492 . + . ID=gene-NLI98_RS25835;Name=silP;gbkey=Gene;gene=silP;gene_biotype=protein_coding;locus_tag=NLI98_RS25835;old_locus_tag=NLI98_25825 NZ_CP100602.1 Protein Homology CDS 78045 80492 . + 0 ID=cds-WP_004098955.1;Parent=gene-NLI98_RS25835;Dbxref=Genbank:WP_004098955.1;Name=WP_004098955.1;gbkey=CDS;gene=silP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008322814.1;locus_tag=NLI98_RS25835;product=Ag(+)-translocating P-type ATPase SilP;protein_id=WP_004098955.1;transl_table=11 NZ_CP100602.1 RefSeq gene 80533 80730 . + . ID=gene-NLI98_RS25840;Name=NLI98_RS25840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25840;old_locus_tag=NLI98_25830 NZ_CP100602.1 Protein Homology CDS 80533 80730 . + 0 ID=cds-WP_000843497.1;Parent=gene-NLI98_RS25840;Dbxref=Genbank:WP_000843497.1;Name=WP_000843497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000843499.1;locus_tag=NLI98_RS25840;product=DUF2933 domain-containing protein;protein_id=WP_000843497.1;transl_table=11 NZ_CP100602.1 RefSeq gene 80764 81501 . - . ID=gene-NLI98_RS25845;Name=NLI98_RS25845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25845;old_locus_tag=NLI98_25835 NZ_CP100602.1 Protein Homology CDS 80764 81501 . - 0 ID=cds-WP_004118669.1;Parent=gene-NLI98_RS25845;Dbxref=Genbank:WP_004118669.1;Name=WP_004118669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436617.1;locus_tag=NLI98_RS25845;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_004118669.1;transl_table=11 NZ_CP100602.1 RefSeq gene 81790 82239 . - . ID=gene-NLI98_RS25850;Name=NLI98_RS25850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25850;old_locus_tag=NLI98_25840 NZ_CP100602.1 Protein Homology CDS 81790 82239 . - 0 ID=cds-WP_001023257.1;Parent=gene-NLI98_RS25850;Dbxref=Genbank:WP_001023257.1;Name=WP_001023257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388333.1;locus_tag=NLI98_RS25850;product=copper resistance protein;protein_id=WP_001023257.1;transl_table=11 NZ_CP100602.1 RefSeq gene 82473 84290 . + . ID=gene-NLI98_RS25855;Name=pcoA;gbkey=Gene;gene=pcoA;gene_biotype=protein_coding;locus_tag=NLI98_RS25855;old_locus_tag=NLI98_25845 NZ_CP100602.1 Protein Homology CDS 82473 84290 . + 0 ID=cds-WP_004213580.1;Parent=gene-NLI98_RS25855;Dbxref=Genbank:WP_004213580.1;Name=WP_004213580.1;gbkey=CDS;gene=pcoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001480786.1;locus_tag=NLI98_RS25855;product=multicopper oxidase PcoA;protein_id=WP_004213580.1;transl_table=11 NZ_CP100602.1 RefSeq gene 84296 85186 . + . ID=gene-NLI98_RS25860;Name=pcoB;gbkey=Gene;gene=pcoB;gene_biotype=protein_coding;locus_tag=NLI98_RS25860;old_locus_tag=NLI98_25850 NZ_CP100602.1 Protein Homology CDS 84296 85186 . + 0 ID=cds-WP_029884201.1;Parent=gene-NLI98_RS25860;Dbxref=Genbank:WP_029884201.1;Name=WP_029884201.1;gbkey=CDS;gene=pcoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001378118.1;locus_tag=NLI98_RS25860;product=copper resistance outer membrane transporter PcoB;protein_id=WP_029884201.1;transl_table=11 NZ_CP100602.1 RefSeq gene 85226 85606 . + . ID=gene-NLI98_RS25865;Name=pcoC;gbkey=Gene;gene=pcoC;gene_biotype=protein_coding;locus_tag=NLI98_RS25865;old_locus_tag=NLI98_25855 NZ_CP100602.1 Protein Homology CDS 85226 85606 . + 0 ID=cds-WP_000025662.1;Parent=gene-NLI98_RS25865;Dbxref=Genbank:WP_000025662.1;Name=WP_000025662.1;gbkey=CDS;gene=pcoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098941.1;locus_tag=NLI98_RS25865;product=copper resistance system metallochaperone PcoC;protein_id=WP_000025662.1;transl_table=11 NZ_CP100602.1 RefSeq gene 85611 86540 . + . ID=gene-NLI98_RS25870;Name=pcoD;gbkey=Gene;gene=pcoD;gene_biotype=protein_coding;locus_tag=NLI98_RS25870;old_locus_tag=NLI98_25860 NZ_CP100602.1 Protein Homology CDS 85611 86540 . + 0 ID=cds-WP_004213583.1;Parent=gene-NLI98_RS25870;Dbxref=Genbank:WP_004213583.1;Name=WP_004213583.1;gbkey=CDS;gene=pcoD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004098940.1;locus_tag=NLI98_RS25870;product=copper resistance inner membrane protein PcoD;protein_id=WP_004213583.1;transl_table=11 NZ_CP100602.1 RefSeq gene 86595 87275 . + . ID=gene-NLI98_RS25875;Name=pcoR;gbkey=Gene;gene=pcoR;gene_biotype=protein_coding;locus_tag=NLI98_RS25875;old_locus_tag=NLI98_25865 NZ_CP100602.1 Protein Homology CDS 86595 87275 . + 0 ID=cds-WP_001188930.1;Parent=gene-NLI98_RS25875;Dbxref=Genbank:WP_001188930.1;Name=WP_001188930.1;gbkey=CDS;gene=pcoR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020239536.1;locus_tag=NLI98_RS25875;product=copper response regulator transcription factor PcoR;protein_id=WP_001188930.1;transl_table=11 NZ_CP100602.1 RefSeq gene 87272 88672 . + . ID=gene-NLI98_RS25880;Name=pcoS;gbkey=Gene;gene=pcoS;gene_biotype=protein_coding;locus_tag=NLI98_RS25880;old_locus_tag=NLI98_25870 NZ_CP100602.1 Protein Homology CDS 87272 88672 . + 0 ID=cds-WP_004152084.1;Parent=gene-NLI98_RS25880;Dbxref=Genbank:WP_004152084.1;Name=WP_004152084.1;gbkey=CDS;gene=pcoS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001211179.1;locus_tag=NLI98_RS25880;product=copper resistance membrane spanning protein PcoS;protein_id=WP_004152084.1;transl_table=11 NZ_CP100602.1 RefSeq gene 88968 89402 . - . ID=gene-NLI98_RS25885;Name=cadR;gbkey=Gene;gene=cadR;gene_biotype=protein_coding;locus_tag=NLI98_RS25885;old_locus_tag=NLI98_25875 NZ_CP100602.1 Protein Homology CDS 88968 89402 . - 0 ID=cds-WP_000405672.1;Parent=gene-NLI98_RS25885;Dbxref=Genbank:WP_000405672.1;Name=WP_000405672.1;Ontology_term=GO:0045893,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;gene=cadR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008063281.1;locus_tag=NLI98_RS25885;product=Cd(II)/Pb(II)-responsive transcriptional regulator;protein_id=WP_000405672.1;transl_table=11 NZ_CP100602.1 RefSeq gene 89488 91893 . + . ID=gene-NLI98_RS25890;Name=NLI98_RS25890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25890;old_locus_tag=NLI98_25880 NZ_CP100602.1 Protein Homology CDS 89488 91893 . + 0 ID=cds-WP_004213585.1;Parent=gene-NLI98_RS25890;Dbxref=Genbank:WP_004213585.1;Name=WP_004213585.1;Ontology_term=GO:0042625;gbkey=CDS;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008434970.1;locus_tag=NLI98_RS25890;product=heavy metal translocating P-type ATPase;protein_id=WP_004213585.1;transl_table=11 NZ_CP100602.1 RefSeq gene 91890 92966 . + . ID=gene-NLI98_RS25895;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=NLI98_RS25895;old_locus_tag=NLI98_25885 NZ_CP100602.1 Protein Homology CDS 91890 92966 . + 0 ID=cds-WP_000118563.1;Parent=gene-NLI98_RS25895;Dbxref=Genbank:WP_000118563.1;Name=WP_000118563.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000118563.1;locus_tag=NLI98_RS25895;product=signal peptidase II;protein_id=WP_000118563.1;transl_table=11 NZ_CP100602.1 RefSeq gene 93096 93653 . + . ID=gene-NLI98_RS25900;Name=NLI98_RS25900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25900;old_locus_tag=NLI98_25890 NZ_CP100602.1 Protein Homology CDS 93096 93653 . + 0 ID=cds-WP_004213590.1;Parent=gene-NLI98_RS25900;Dbxref=Genbank:WP_004213590.1;Name=WP_004213590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016236504.1;locus_tag=NLI98_RS25900;product=recombinase family protein;protein_id=WP_004213590.1;transl_table=11 NZ_CP100602.1 RefSeq gene 93656 96625 . + . ID=gene-NLI98_RS25905;Name=NLI98_RS25905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25905;old_locus_tag=NLI98_25895 NZ_CP100602.1 Protein Homology CDS 93656 96625 . + 0 ID=cds-WP_004213592.1;Parent=gene-NLI98_RS25905;Dbxref=Genbank:WP_004213592.1;Name=WP_004213592.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_021138877.1;locus_tag=NLI98_RS25905;product=Tn3 family transposase;protein_id=WP_004213592.1;transl_table=11 NZ_CP100602.1 RefSeq gene 96667 97161 . + . ID=gene-NLI98_RS25910;Name=NLI98_RS25910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25910;old_locus_tag=NLI98_25900 NZ_CP100602.1 Protein Homology CDS 96667 97161 . + 0 ID=cds-WP_004213594.1;Parent=gene-NLI98_RS25910;Dbxref=Genbank:WP_004213594.1;Name=WP_004213594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020805591.1;locus_tag=NLI98_RS25910;product=hypothetical protein;protein_id=WP_004213594.1;transl_table=11 NZ_CP100602.1 RefSeq gene 97222 97425 . + . ID=gene-NLI98_RS25915;Name=hha;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=NLI98_RS25915;old_locus_tag=NLI98_25905 NZ_CP100602.1 Protein Homology CDS 97222 97425 . + 0 ID=cds-WP_004213596.1;Parent=gene-NLI98_RS25915;Dbxref=Genbank:WP_004213596.1;Name=WP_004213596.1;gbkey=CDS;gene=hha;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208622.1;locus_tag=NLI98_RS25915;product=hemolysin expression modulator Hha;protein_id=WP_004213596.1;transl_table=11 NZ_CP100602.1 RefSeq gene 97439 97669 . + . ID=gene-NLI98_RS25920;Name=NLI98_RS25920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25920;old_locus_tag=NLI98_25910 NZ_CP100602.1 Protein Homology CDS 97439 97669 . + 0 ID=cds-WP_004213598.1;Parent=gene-NLI98_RS25920;Dbxref=Genbank:WP_004213598.1;Name=WP_004213598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019725034.1;locus_tag=NLI98_RS25920;product=hypothetical protein;protein_id=WP_004213598.1;transl_table=11 NZ_CP100602.1 RefSeq gene 97864 98130 . + . ID=gene-NLI98_RS25925;Name=NLI98_RS25925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25925;old_locus_tag=NLI98_25915 NZ_CP100602.1 Protein Homology CDS 97864 98130 . + 0 ID=cds-WP_004213599.1;Parent=gene-NLI98_RS25925;Dbxref=Genbank:WP_004213599.1;Name=WP_004213599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213599.1;locus_tag=NLI98_RS25925;product=DUF1778 domain-containing protein;protein_id=WP_004213599.1;transl_table=11 NZ_CP100602.1 RefSeq gene 98118 98600 . + . ID=gene-NLI98_RS25930;Name=NLI98_RS25930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25930;old_locus_tag=NLI98_25920 NZ_CP100602.1 Protein Homology CDS 98118 98600 . + 0 ID=cds-WP_004098919.1;Parent=gene-NLI98_RS25930;Dbxref=Genbank:WP_004098919.1;Name=WP_004098919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540079.1;locus_tag=NLI98_RS25930;product=GNAT family N-acetyltransferase;protein_id=WP_004098919.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 99021 100248 . + . ID=gene-NLI98_RS25935;Name=NLI98_RS25935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS25935;old_locus_tag=NLI98_25925;pseudo=true NZ_CP100602.1 Protein Homology CDS 99021 100248 . + 0 ID=cds-NLI98_RS25935;Parent=gene-NLI98_RS25935;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558215.1;locus_tag=NLI98_RS25935;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 100244 100639 . - . ID=gene-NLI98_RS25940;Name=NLI98_RS25940;end_range=100639,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS25940;old_locus_tag=NLI98_25930;partial=true;pseudo=true;start_range=.,100244 NZ_CP100602.1 Protein Homology CDS 100244 100639 . - 0 ID=cds-NLI98_RS25940;Parent=gene-NLI98_RS25940;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=100639,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010972061.1;locus_tag=NLI98_RS25940;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,100244;transl_table=11 NZ_CP100602.1 RefSeq gene 100814 101836 . - . ID=gene-NLI98_RS25945;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=NLI98_RS25945;old_locus_tag=NLI98_25935 NZ_CP100602.1 Protein Homology CDS 100814 101836 . - 0 ID=cds-WP_004214536.1;Parent=gene-NLI98_RS25945;Dbxref=Genbank:WP_004214536.1;Name=WP_004214536.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000022378.1;locus_tag=NLI98_RS25945;product=porphobilinogen synthase;protein_id=WP_004214536.1;transl_table=11 NZ_CP100602.1 RefSeq gene 101900 103246 . - . ID=gene-NLI98_RS25950;Name=NLI98_RS25950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25950;old_locus_tag=NLI98_25940 NZ_CP100602.1 Protein Homology CDS 101900 103246 . - 0 ID=cds-WP_011154555.1;Parent=gene-NLI98_RS25950;Dbxref=Genbank:WP_011154555.1;Name=WP_011154555.1;Ontology_term=GO:0016812;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011154555.1;locus_tag=NLI98_RS25950;product=dihydroorotase;protein_id=WP_011154555.1;transl_table=11 NZ_CP100602.1 RefSeq gene 103243 104094 . - . ID=gene-NLI98_RS25955;Name=NLI98_RS25955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25955;old_locus_tag=NLI98_25945 NZ_CP100602.1 Protein Homology CDS 103243 104094 . - 0 ID=cds-WP_004214538.1;Parent=gene-NLI98_RS25955;Dbxref=Genbank:WP_004214538.1;Name=WP_004214538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004214538.1;locus_tag=NLI98_RS25955;product=M14 family metallocarboxypeptidase;protein_id=WP_004214538.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 104087 104848 . - . ID=gene-NLI98_RS25960;Name=NLI98_RS25960;end_range=104848,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS25960;old_locus_tag=NLI98_25950;partial=true;pseudo=true NZ_CP100602.1 Protein Homology CDS 104087 104848 . - 0 ID=cds-NLI98_RS25960;Parent=gene-NLI98_RS25960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=104848,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001181760.1;locus_tag=NLI98_RS25960;partial=true;product=His/Gly/Thr/Pro-type tRNA ligase C-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 104888 105088 . - . ID=gene-NLI98_RS25965;Name=NLI98_RS25965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS25965;old_locus_tag=NLI98_25955;partial=true;pseudo=true;start_range=.,104888 NZ_CP100602.1 Protein Homology CDS 104888 105088 . - 0 ID=cds-NLI98_RS25965;Parent=gene-NLI98_RS25965;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014839.2;locus_tag=NLI98_RS25965;partial=true;product=TGS domain-containing protein;pseudo=true;start_range=.,104888;transl_table=11 NZ_CP100602.1 RefSeq gene 105518 106342 . + . ID=gene-NLI98_RS25970;Name=NLI98_RS25970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25970;old_locus_tag=NLI98_25960 NZ_CP100602.1 Protein Homology CDS 105518 106342 . + 0 ID=cds-WP_004214540.1;Parent=gene-NLI98_RS25970;Dbxref=Genbank:WP_004214540.1;Name=WP_004214540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000709111.1;locus_tag=NLI98_RS25970;product=DUF1460 domain-containing protein;protein_id=WP_004214540.1;transl_table=11 NZ_CP100602.1 RefSeq gene 106359 107225 . - . ID=gene-NLI98_RS25975;Name=NLI98_RS25975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25975;old_locus_tag=NLI98_25965 NZ_CP100602.1 Protein Homology CDS 106359 107225 . - 0 ID=cds-WP_011251271.1;Parent=gene-NLI98_RS25975;Dbxref=Genbank:WP_011251271.1;Name=WP_011251271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001419903.1;locus_tag=NLI98_RS25975;product=hypothetical protein;protein_id=WP_011251271.1;transl_table=11 NZ_CP100602.1 RefSeq gene 107355 107915 . - . ID=gene-NLI98_RS25980;Name=NLI98_RS25980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25980;old_locus_tag=NLI98_25970 NZ_CP100602.1 Protein Homology CDS 107355 107915 . - 0 ID=cds-WP_004214543.1;Parent=gene-NLI98_RS25980;Dbxref=Genbank:WP_004214543.1;Name=WP_004214543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007193149.1;locus_tag=NLI98_RS25980;product=carbonate dehydratase;protein_id=WP_004214543.1;transl_table=11 NZ_CP100602.1 RefSeq gene 107905 108840 . - . ID=gene-NLI98_RS25985;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=NLI98_RS25985;old_locus_tag=NLI98_25975 NZ_CP100602.1 Protein Homology CDS 107905 108840 . - 0 ID=cds-WP_004214545.1;Parent=gene-NLI98_RS25985;Dbxref=Genbank:WP_004214545.1;Name=WP_004214545.1;Ontology_term=GO:0035998,GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;go_process=7%2C8-dihydroneopterin 3'-triphosphate biosynthetic process|0035998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016531967.1;locus_tag=NLI98_RS25985;product=GTP cyclohydrolase FolE2;protein_id=WP_004214545.1;transl_table=11 NZ_CP100602.1 RefSeq gene 108904 109326 . - . ID=gene-NLI98_RS25990;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=NLI98_RS25990;old_locus_tag=NLI98_25980 NZ_CP100602.1 Protein Homology CDS 108904 109326 . - 0 ID=cds-WP_004214547.1;Parent=gene-NLI98_RS25990;Dbxref=Genbank:WP_004214547.1;Name=WP_004214547.1;Ontology_term=GO:0006355,GO:0019899;gbkey=CDS;gene=dksA;go_function=enzyme binding|0019899||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004150576.1;locus_tag=NLI98_RS25990;product=RNA polymerase-binding protein DksA;protein_id=WP_004214547.1;transl_table=11 NZ_CP100602.1 RefSeq gene 109397 110596 . - . ID=gene-NLI98_RS25995;Name=NLI98_RS25995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS25995;old_locus_tag=NLI98_25985 NZ_CP100602.1 Protein Homology CDS 109397 110596 . - 0 ID=cds-WP_014599314.1;Parent=gene-NLI98_RS25995;Dbxref=Genbank:WP_014599314.1;Name=WP_014599314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902162.1;locus_tag=NLI98_RS25995;product=GTP-binding protein;protein_id=WP_014599314.1;transl_table=11 NZ_CP100602.1 RefSeq gene 110694 111146 . + . ID=gene-NLI98_RS26000;Name=NLI98_RS26000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26000;old_locus_tag=NLI98_25990 NZ_CP100602.1 Protein Homology CDS 110694 111146 . + 0 ID=cds-WP_011251268.1;Parent=gene-NLI98_RS26000;Dbxref=Genbank:WP_011251268.1;Name=WP_011251268.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211298.1;locus_tag=NLI98_RS26000;product=transcriptional repressor;protein_id=WP_011251268.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 111226 112607 . + . ID=gene-NLI98_RS26005;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=pseudogene;locus_tag=NLI98_RS26005;old_locus_tag=NLI98_25995;pseudo=true NZ_CP100602.1 Protein Homology CDS 111226 112607 . + 0 ID=cds-NLI98_RS26005;Parent=gene-NLI98_RS26005;Note=frameshifted%3B internal stop;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094674.1;locus_tag=NLI98_RS26005;product=cysteine--tRNA ligase;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq gene 112678 113808 . + . ID=gene-NLI98_RS26010;Name=NLI98_RS26010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26010;old_locus_tag=NLI98_26000 NZ_CP100602.1 Protein Homology CDS 112678 113808 . + 0 ID=cds-WP_004212832.1;Parent=gene-NLI98_RS26010;Dbxref=Genbank:WP_004212832.1;Name=WP_004212832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212832.1;locus_tag=NLI98_RS26010;product=NAD(P)-binding domain-containing protein;protein_id=WP_004212832.1;transl_table=11 NZ_CP100602.1 RefSeq gene 113819 115468 . + . ID=gene-NLI98_RS26015;Name=NLI98_RS26015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26015;old_locus_tag=NLI98_26005 NZ_CP100602.1 Protein Homology CDS 113819 115468 . + 0 ID=cds-WP_004212831.1;Parent=gene-NLI98_RS26015;Dbxref=Genbank:WP_004212831.1;Name=WP_004212831.1;Ontology_term=GO:0005525;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014907277.1;locus_tag=NLI98_RS26015;product=50S ribosome-binding GTPase;protein_id=WP_004212831.1;transl_table=11 NZ_CP100602.1 RefSeq gene 115737 116957 . - . ID=gene-NLI98_RS26020;Name=zigA;gbkey=Gene;gene=zigA;gene_biotype=protein_coding;locus_tag=NLI98_RS26020;old_locus_tag=NLI98_26010 NZ_CP100602.1 Protein Homology CDS 115737 116957 . - 0 ID=cds-WP_004212827.1;Parent=gene-NLI98_RS26020;Dbxref=Genbank:WP_004212827.1;Name=WP_004212827.1;gbkey=CDS;gene=zigA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212827.1;locus_tag=NLI98_RS26020;product=zinc metallochaperone GTPase ZigA;protein_id=WP_004212827.1;transl_table=11 NZ_CP100602.1 RefSeq gene 116994 117395 . - . ID=gene-NLI98_RS26025;Name=hisI;gbkey=Gene;gene=hisI;gene_biotype=protein_coding;locus_tag=NLI98_RS26025;old_locus_tag=NLI98_26015 NZ_CP100602.1 Protein Homology CDS 116994 117395 . - 0 ID=cds-WP_004212825.1;Parent=gene-NLI98_RS26025;Dbxref=Genbank:WP_004212825.1;Name=WP_004212825.1;Ontology_term=GO:0000105,GO:0004635;gbkey=CDS;gene=hisI;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212825.1;locus_tag=NLI98_RS26025;product=phosphoribosyl-AMP cyclohydrolase;protein_id=WP_004212825.1;transl_table=11 NZ_CP100602.1 RefSeq gene 117540 118040 . + . ID=gene-NLI98_RS26030;Name=NLI98_RS26030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26030;old_locus_tag=NLI98_26020 NZ_CP100602.1 Protein Homology CDS 117540 118040 . + 0 ID=cds-WP_004212823.1;Parent=gene-NLI98_RS26030;Dbxref=Genbank:WP_004212823.1;Name=WP_004212823.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212823.1;locus_tag=NLI98_RS26030;product=transcriptional repressor;protein_id=WP_004212823.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 118416 119402 . - . ID=gene-NLI98_RS26035;Name=NLI98_RS26035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS26035;old_locus_tag=NLI98_26025;pseudo=true NZ_CP100602.1 Protein Homology CDS 118416 119402 . - 0 ID=cds-NLI98_RS26035;Parent=gene-NLI98_RS26035;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1;locus_tag=NLI98_RS26035;product=IS630 family transposase;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq gene 119499 119984 . - . ID=gene-NLI98_RS26040;Name=NLI98_RS26040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26040;old_locus_tag=NLI98_26030 NZ_CP100602.1 GeneMarkS-2+ CDS 119499 119984 . - 0 ID=cds-WP_011154565.1;Parent=gene-NLI98_RS26040;Dbxref=Genbank:WP_011154565.1;Name=WP_011154565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS26040;product=hypothetical protein;protein_id=WP_011154565.1;transl_table=11 NZ_CP100602.1 RefSeq gene 119988 120113 . - . ID=gene-NLI98_RS26045;Name=NLI98_RS26045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26045 NZ_CP100602.1 GeneMarkS-2+ CDS 119988 120113 . - 0 ID=cds-WP_011251267.1;Parent=gene-NLI98_RS26045;Dbxref=Genbank:WP_011251267.1;Name=WP_011251267.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS26045;product=hypothetical protein;protein_id=WP_011251267.1;transl_table=11 NZ_CP100602.1 RefSeq gene 120147 120293 . - . ID=gene-NLI98_RS26050;Name=NLI98_RS26050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26050;old_locus_tag=NLI98_26035 NZ_CP100602.1 Protein Homology CDS 120147 120293 . - 0 ID=cds-WP_004212816.1;Parent=gene-NLI98_RS26050;Dbxref=Genbank:WP_004212816.1;Name=WP_004212816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004212816.1;locus_tag=NLI98_RS26050;product=hypothetical protein;protein_id=WP_004212816.1;transl_table=11 NZ_CP100602.1 RefSeq gene 120766 121734 . - . ID=gene-NLI98_RS26055;Name=NLI98_RS26055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26055;old_locus_tag=NLI98_26040 NZ_CP100602.1 Protein Homology CDS 120766 121734 . - 0 ID=cds-WP_004225014.1-4;Parent=gene-NLI98_RS26055;Dbxref=Genbank:WP_004225014.1;Name=WP_004225014.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=NLI98_RS26055;product=IS5 family transposase;protein_id=WP_004225014.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 121998 122235 . + . ID=gene-NLI98_RS26060;Name=NLI98_RS26060;end_range=122235,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS26060;old_locus_tag=NLI98_26045;partial=true;pseudo=true NZ_CP100602.1 Protein Homology CDS 121998 122235 . + 0 ID=cds-NLI98_RS26060;Parent=gene-NLI98_RS26060;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=122235,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015768659.1;locus_tag=NLI98_RS26060;partial=true;product=GTP-binding protein;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq gene 122434 123261 . + . ID=gene-NLI98_RS26065;Name=NLI98_RS26065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26065;old_locus_tag=NLI98_26050 NZ_CP100602.1 Protein Homology CDS 122434 123261 . + 0 ID=cds-WP_004213252.1;Parent=gene-NLI98_RS26065;Dbxref=Genbank:WP_004213252.1;Name=WP_004213252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213252.1;locus_tag=NLI98_RS26065;product=ABC transporter ATP-binding protein;protein_id=WP_004213252.1;transl_table=11 NZ_CP100602.1 RefSeq gene 123283 124239 . + . ID=gene-NLI98_RS26070;Name=NLI98_RS26070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26070;old_locus_tag=NLI98_26055 NZ_CP100602.1 Protein Homology CDS 123283 124239 . + 0 ID=cds-WP_004213250.1;Parent=gene-NLI98_RS26070;Dbxref=Genbank:WP_004213250.1;Name=WP_004213250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004175358.1;locus_tag=NLI98_RS26070;product=ABC transporter substrate-binding protein;protein_id=WP_004213250.1;transl_table=11 NZ_CP100602.1 RefSeq gene 124239 125243 . + . ID=gene-NLI98_RS26075;Name=NLI98_RS26075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26075;old_locus_tag=NLI98_26060 NZ_CP100602.1 Protein Homology CDS 124239 125243 . + 0 ID=cds-WP_004902166.1;Parent=gene-NLI98_RS26075;Dbxref=Genbank:WP_004902166.1;Name=WP_004902166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902166.1;locus_tag=NLI98_RS26075;product=iron ABC transporter permease;protein_id=WP_004902166.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 125412 125618 . + . ID=gene-NLI98_RS26080;Name=NLI98_RS26080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS26080;old_locus_tag=NLI98_26065;partial=true;pseudo=true;start_range=.,125412 NZ_CP100602.1 Protein Homology CDS 125412 125618 . + 0 ID=cds-NLI98_RS26080;Parent=gene-NLI98_RS26080;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015637550.1;locus_tag=NLI98_RS26080;partial=true;product=hypothetical protein;pseudo=true;start_range=.,125412;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 125567 125986 . + . ID=gene-NLI98_RS26085;Name=NLI98_RS26085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS26085;old_locus_tag=NLI98_26070;partial=true;pseudo=true;start_range=.,125567 NZ_CP100602.1 Protein Homology CDS 125567 125986 . + 0 ID=cds-NLI98_RS26085;Parent=gene-NLI98_RS26085;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000005768.1;locus_tag=NLI98_RS26085;partial=true;product=GTP-binding protein;pseudo=true;start_range=.,125567;transl_table=11 NZ_CP100602.1 RefSeq gene 125906 126613 . - . ID=gene-NLI98_RS26090;Name=NLI98_RS26090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26090;old_locus_tag=NLI98_26075 NZ_CP100602.1 Protein Homology CDS 125906 126613 . - 0 ID=cds-WP_004213424.1;Parent=gene-NLI98_RS26090;Dbxref=Genbank:WP_004213424.1;Name=WP_004213424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000856367.1;locus_tag=NLI98_RS26090;product=class I SAM-dependent methyltransferase;protein_id=WP_004213424.1;transl_table=11 NZ_CP100602.1 RefSeq gene 126855 127022 . + . ID=gene-NLI98_RS26095;Name=NLI98_RS26095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26095;old_locus_tag=NLI98_26080 NZ_CP100602.1 GeneMarkS-2+ CDS 126855 127022 . + 0 ID=cds-WP_159174225.1;Parent=gene-NLI98_RS26095;Dbxref=Genbank:WP_159174225.1;Name=WP_159174225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS26095;product=hypothetical protein;protein_id=WP_159174225.1;transl_table=11 NZ_CP100602.1 RefSeq gene 127124 128323 . - . ID=gene-NLI98_RS26100;Name=NLI98_RS26100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26100;old_locus_tag=NLI98_26085 NZ_CP100602.1 Protein Homology CDS 127124 128323 . - 0 ID=cds-WP_004902162.1;Parent=gene-NLI98_RS26100;Dbxref=Genbank:WP_004902162.1;Name=WP_004902162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902162.1;locus_tag=NLI98_RS26100;product=GTP-binding protein;protein_id=WP_004902162.1;transl_table=11 NZ_CP100602.1 RefSeq gene 128421 128807 . + . ID=gene-NLI98_RS26105;Name=NLI98_RS26105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26105;old_locus_tag=NLI98_26090 NZ_CP100602.1 Protein Homology CDS 128421 128807 . + 0 ID=cds-WP_004902159.1;Parent=gene-NLI98_RS26105;Dbxref=Genbank:WP_004902159.1;Name=WP_004902159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902159.1;locus_tag=NLI98_RS26105;product=hypothetical protein;protein_id=WP_004902159.1;transl_table=11 NZ_CP100602.1 RefSeq gene 129044 129361 . + . ID=gene-NLI98_RS26110;Name=NLI98_RS26110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26110;old_locus_tag=NLI98_26095 NZ_CP100602.1 Protein Homology CDS 129044 129361 . + 0 ID=cds-WP_004213915.1;Parent=gene-NLI98_RS26110;Dbxref=Genbank:WP_004213915.1;Name=WP_004213915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145289.1;locus_tag=NLI98_RS26110;product=c-type lysozyme inhibitor;protein_id=WP_004213915.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 129712 129861 . - . ID=gene-NLI98_RS26115;Name=NLI98_RS26115;end_range=129861,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS26115;old_locus_tag=NLI98_26100;partial=true;pseudo=true;start_range=.,129712 NZ_CP100602.1 Protein Homology CDS 129712 129861 . - 0 ID=cds-NLI98_RS26115;Parent=gene-NLI98_RS26115;Note=with FecA forms the FecAR signal transduction system%3B ferric citrate binds FecA and transmits a signal across the outer membrane to FecR. FecR transmits a signal across the cytoplasmic membrane and activates the sigma 70 protein FecI that directs the RNA polymerase to express the fecABCDE operon%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=129861,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526836.1;locus_tag=NLI98_RS26115;partial=true;product=iron dicitrate transport regulator FecR;pseudo=true;start_range=.,129712;transl_table=11 NZ_CP100602.1 RefSeq gene 129911 130420 . - . ID=gene-NLI98_RS26120;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=NLI98_RS26120;old_locus_tag=NLI98_26105 NZ_CP100602.1 Protein Homology CDS 129911 130420 . - 0 ID=cds-WP_004145290.1;Parent=gene-NLI98_RS26120;Dbxref=Genbank:WP_004145290.1;Name=WP_004145290.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312179.1;locus_tag=NLI98_RS26120;product=peptide deformylase;protein_id=WP_004145290.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 130658 131145 . - . ID=gene-NLI98_RS26125;Name=NLI98_RS26125;end_range=131145,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS26125;old_locus_tag=NLI98_26110;partial=true;pseudo=true;start_range=.,130658 NZ_CP100602.1 Protein Homology CDS 130658 131145 . - 0 ID=cds-NLI98_RS26125;Parent=gene-NLI98_RS26125;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=131145,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001395480.1%2CRefSeq:WP_086558296.1;locus_tag=NLI98_RS26125;partial=true;product=IS630 family transposase;pseudo=true;start_range=.,130658;transl_table=11 NZ_CP100602.1 RefSeq gene 131281 131445 . - . ID=gene-NLI98_RS26130;Name=NLI98_RS26130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26130;old_locus_tag=NLI98_26115 NZ_CP100602.1 Protein Homology CDS 131281 131445 . - 0 ID=cds-WP_223174999.1;Parent=gene-NLI98_RS26130;Dbxref=Genbank:WP_223174999.1;Name=WP_223174999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213918.1;locus_tag=NLI98_RS26130;product=hypothetical protein;protein_id=WP_223174999.1;transl_table=11 NZ_CP100602.1 RefSeq gene 131881 132120 . - . ID=gene-NLI98_RS26135;Name=NLI98_RS26135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26135;old_locus_tag=NLI98_26120 NZ_CP100602.1 GeneMarkS-2+ CDS 131881 132120 . - 0 ID=cds-WP_004145299.1;Parent=gene-NLI98_RS26135;Dbxref=Genbank:WP_004145299.1;Name=WP_004145299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS26135;product=hypothetical protein;protein_id=WP_004145299.1;transl_table=11 NZ_CP100602.1 RefSeq gene 132173 133372 . - . ID=gene-NLI98_RS26140;Name=NLI98_RS26140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26140;old_locus_tag=NLI98_26125 NZ_CP100602.1 Protein Homology CDS 132173 133372 . - 0 ID=cds-WP_023302795.1;Parent=gene-NLI98_RS26140;Dbxref=Genbank:WP_023302795.1;Name=WP_023302795.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213919.1;locus_tag=NLI98_RS26140;product=MFS transporter;protein_id=WP_023302795.1;transl_table=11 NZ_CP100602.1 RefSeq gene 133529 135253 . + . ID=gene-NLI98_RS26145;Name=iucA;gbkey=Gene;gene=iucA;gene_biotype=protein_coding;locus_tag=NLI98_RS26145;old_locus_tag=NLI98_26130 NZ_CP100602.1 Protein Homology CDS 133529 135253 . + 0 ID=cds-WP_004213920.1;Parent=gene-NLI98_RS26145;Dbxref=Genbank:WP_004213920.1;Name=WP_004213920.1;gbkey=CDS;gene=iucA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008453426.1;locus_tag=NLI98_RS26145;product=NIS family aerobactin synthetase IucA;protein_id=WP_004213920.1;transl_table=11 NZ_CP100602.1 RefSeq gene 135254 136201 . + . ID=gene-NLI98_RS26150;Name=iucB;gbkey=Gene;gene=iucB;gene_biotype=protein_coding;locus_tag=NLI98_RS26150;old_locus_tag=NLI98_26135 NZ_CP100602.1 Protein Homology CDS 135254 136201 . + 0 ID=cds-WP_004213921.1;Parent=gene-NLI98_RS26150;Dbxref=Genbank:WP_004213921.1;Name=WP_004213921.1;gbkey=CDS;gene=iucB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709455.1;locus_tag=NLI98_RS26150;product=N(6)-hydroxylysine O-acetyltransferase IucB;protein_id=WP_004213921.1;transl_table=11 NZ_CP100602.1 RefSeq gene 136201 137934 . + . ID=gene-NLI98_RS26155;Name=iucC;gbkey=Gene;gene=iucC;gene_biotype=protein_coding;locus_tag=NLI98_RS26155;old_locus_tag=NLI98_26140 NZ_CP100602.1 Protein Homology CDS 136201 137934 . + 0 ID=cds-WP_004213922.1;Parent=gene-NLI98_RS26155;Dbxref=Genbank:WP_004213922.1;Name=WP_004213922.1;gbkey=CDS;gene=iucC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105632.1;locus_tag=NLI98_RS26155;product=NIS family aerobactin synthetase IucC;protein_id=WP_004213922.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 137938 139271 . + . ID=gene-NLI98_RS26160;Name=iucD;gbkey=Gene;gene=iucD;gene_biotype=pseudogene;locus_tag=NLI98_RS26160;old_locus_tag=NLI98_26145;pseudo=true NZ_CP100602.1 Protein Homology CDS 137938 139271 . + 0 ID=cds-NLI98_RS26160;Parent=gene-NLI98_RS26160;Note=frameshifted;gbkey=CDS;gene=iucD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016528830.1;locus_tag=NLI98_RS26160;product=NADPH-dependent L-lysine N(6)-monooxygenase;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq gene 139297 141498 . + . ID=gene-NLI98_RS26165;Name=iutA;gbkey=Gene;gene=iutA;gene_biotype=protein_coding;locus_tag=NLI98_RS26165;old_locus_tag=NLI98_26150 NZ_CP100602.1 Protein Homology CDS 139297 141498 . + 0 ID=cds-WP_088498203.1;Parent=gene-NLI98_RS26165;Dbxref=Genbank:WP_088498203.1;Name=WP_088498203.1;gbkey=CDS;gene=iutA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213924.1;locus_tag=NLI98_RS26165;product=ferric aerobactin receptor IutA;protein_id=WP_088498203.1;transl_table=11 NZ_CP100602.1 RefSeq gene 142165 142425 . + . ID=gene-NLI98_RS26170;Name=NLI98_RS26170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26170;old_locus_tag=NLI98_26155 NZ_CP100602.1 Protein Homology CDS 142165 142425 . + 0 ID=cds-WP_004213925.1;Parent=gene-NLI98_RS26170;Dbxref=Genbank:WP_004213925.1;Name=WP_004213925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145307.1;locus_tag=NLI98_RS26170;product=DUF1471 domain-containing protein;protein_id=WP_004213925.1;transl_table=11 NZ_CP100602.1 RefSeq gene 142467 143027 . + . ID=gene-NLI98_RS26175;Name=NLI98_RS26175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26175;old_locus_tag=NLI98_26160 NZ_CP100602.1 Protein Homology CDS 142467 143027 . + 0 ID=cds-WP_004213927.1;Parent=gene-NLI98_RS26175;Dbxref=Genbank:WP_004213927.1;Name=WP_004213927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145308.1;locus_tag=NLI98_RS26175;product=TetR/AcrR family transcriptional regulator;protein_id=WP_004213927.1;transl_table=11 NZ_CP100602.1 RefSeq gene 143065 143493 . + . ID=gene-NLI98_RS26180;Name=NLI98_RS26180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26180;old_locus_tag=NLI98_26165 NZ_CP100602.1 Protein Homology CDS 143065 143493 . + 0 ID=cds-WP_004902152.1;Parent=gene-NLI98_RS26180;Dbxref=Genbank:WP_004902152.1;Name=WP_004902152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902152.1;locus_tag=NLI98_RS26180;product=DUF417 family protein;protein_id=WP_004902152.1;transl_table=11 NZ_CP100602.1 RefSeq gene 143577 143852 . + . ID=gene-NLI98_RS26185;Name=NLI98_RS26185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26185;old_locus_tag=NLI98_26170 NZ_CP100602.1 Protein Homology CDS 143577 143852 . + 0 ID=cds-WP_004213932.1;Parent=gene-NLI98_RS26185;Dbxref=Genbank:WP_004213932.1;Name=WP_004213932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145310.1;locus_tag=NLI98_RS26185;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_004213932.1;transl_table=11 NZ_CP100602.1 RefSeq gene 143915 144406 . + . ID=gene-NLI98_RS26190;Name=NLI98_RS26190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26190;old_locus_tag=NLI98_26175 NZ_CP100602.1 Protein Homology CDS 143915 144406 . + 0 ID=cds-WP_011251327.1;Parent=gene-NLI98_RS26190;Dbxref=Genbank:WP_011251327.1;Name=WP_011251327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145311.1;locus_tag=NLI98_RS26190;product=DM13 domain-containing protein;protein_id=WP_011251327.1;transl_table=11 NZ_CP100602.1 RefSeq gene 144455 145375 . + . ID=gene-NLI98_RS26195;Name=NLI98_RS26195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26195;old_locus_tag=NLI98_26180 NZ_CP100602.1 Protein Homology CDS 144455 145375 . + 0 ID=cds-WP_004213934.1;Parent=gene-NLI98_RS26195;Dbxref=Genbank:WP_004213934.1;Name=WP_004213934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529250.1;locus_tag=NLI98_RS26195;product=DUF1471 domain-containing protein;protein_id=WP_004213934.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 145466 145869 . + . ID=gene-NLI98_RS26200;Name=NLI98_RS26200;end_range=145869,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS26200;old_locus_tag=NLI98_26185;partial=true;pseudo=true NZ_CP100602.1 Protein Homology CDS 145466 145869 . + 0 ID=cds-NLI98_RS26200;Parent=gene-NLI98_RS26200;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=145869,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456962.1;locus_tag=NLI98_RS26200;partial=true;product=GAF domain-containing protein;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 146387 147023 . - . ID=gene-NLI98_RS26205;Name=rmpA2;gbkey=Gene;gene=rmpA2;gene_biotype=pseudogene;locus_tag=NLI98_RS26205;old_locus_tag=NLI98_26190;pseudo=true NZ_CP100602.1 Protein Homology CDS 146387 147023 . - 0 ID=cds-NLI98_RS26205;Parent=gene-NLI98_RS26205;Note=frameshifted;gbkey=CDS;gene=rmpA2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011154608.1;locus_tag=NLI98_RS26205;product=mucoid phenotype regulator RmpA2;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 147440 147744 . + . ID=gene-NLI98_RS26210;Name=NLI98_RS26210;end_range=147744,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS26210;old_locus_tag=NLI98_26195;partial=true;pseudo=true NZ_CP100602.1 Protein Homology CDS 147440 147744 . + 0 ID=cds-NLI98_RS26210;Parent=gene-NLI98_RS26210;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=147744,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612091.1;locus_tag=NLI98_RS26210;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq gene 147767 148018 . - . ID=gene-NLI98_RS26215;Name=NLI98_RS26215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26215;old_locus_tag=NLI98_26200 NZ_CP100602.1 GeneMarkS-2+ CDS 147767 148018 . - 0 ID=cds-WP_186987481.1;Parent=gene-NLI98_RS26215;Dbxref=Genbank:WP_186987481.1;Name=WP_186987481.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS26215;product=hypothetical protein;protein_id=WP_186987481.1;transl_table=11 NZ_CP100602.1 RefSeq gene 148167 148610 . - . ID=gene-NLI98_RS26220;Name=NLI98_RS26220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26220;old_locus_tag=NLI98_26205 NZ_CP100602.1 Protein Homology CDS 148167 148610 . - 0 ID=cds-WP_004213072.1;Parent=gene-NLI98_RS26220;Dbxref=Genbank:WP_004213072.1;Name=WP_004213072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213072.1;locus_tag=NLI98_RS26220;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_004213072.1;transl_table=11 NZ_CP100602.1 RefSeq gene 148607 148837 . - . ID=gene-NLI98_RS26225;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=NLI98_RS26225;old_locus_tag=NLI98_26210 NZ_CP100602.1 Protein Homology CDS 148607 148837 . - 0 ID=cds-WP_004213073.1;Parent=gene-NLI98_RS26225;Dbxref=Genbank:WP_004213073.1;Name=WP_004213073.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213073.1;locus_tag=NLI98_RS26225;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_004213073.1;transl_table=11 NZ_CP100602.1 RefSeq gene 149445 150578 . + . ID=gene-NLI98_RS26230;Name=NLI98_RS26230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26230;old_locus_tag=NLI98_26215 NZ_CP100602.1 Protein Homology CDS 149445 150578 . + 0 ID=cds-WP_004213075.1;Parent=gene-NLI98_RS26230;Dbxref=Genbank:WP_004213075.1;Name=WP_004213075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213075.1;locus_tag=NLI98_RS26230;product=DUF3800 domain-containing protein;protein_id=WP_004213075.1;transl_table=11 NZ_CP100602.1 RefSeq gene 150594 150887 . + . ID=gene-NLI98_RS26235;Name=NLI98_RS26235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26235;old_locus_tag=NLI98_26220 NZ_CP100602.1 Protein Homology CDS 150594 150887 . + 0 ID=cds-WP_004213076.1;Parent=gene-NLI98_RS26235;Dbxref=Genbank:WP_004213076.1;Name=WP_004213076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213076.1;locus_tag=NLI98_RS26235;product=hypothetical protein;protein_id=WP_004213076.1;transl_table=11 NZ_CP100602.1 RefSeq gene 150877 151083 . - . ID=gene-NLI98_RS26240;Name=NLI98_RS26240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26240;old_locus_tag=NLI98_26225 NZ_CP100602.1 Protein Homology CDS 150877 151083 . - 0 ID=cds-WP_004213077.1;Parent=gene-NLI98_RS26240;Dbxref=Genbank:WP_004213077.1;Name=WP_004213077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213077.1;locus_tag=NLI98_RS26240;product=hypothetical protein;protein_id=WP_004213077.1;transl_table=11 NZ_CP100602.1 RefSeq gene 151435 151725 . + . ID=gene-NLI98_RS26245;Name=NLI98_RS26245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26245;old_locus_tag=NLI98_26230 NZ_CP100602.1 Protein Homology CDS 151435 151725 . + 0 ID=cds-WP_004213078.1;Parent=gene-NLI98_RS26245;Dbxref=Genbank:WP_004213078.1;Name=WP_004213078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213078.1;locus_tag=NLI98_RS26245;product=hypothetical protein;protein_id=WP_004213078.1;transl_table=11 NZ_CP100602.1 RefSeq gene 151715 152614 . + . ID=gene-NLI98_RS26250;Name=NLI98_RS26250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26250;old_locus_tag=NLI98_26235 NZ_CP100602.1 Protein Homology CDS 151715 152614 . + 0 ID=cds-WP_004225022.1;Parent=gene-NLI98_RS26250;Dbxref=Genbank:WP_004225022.1;Name=WP_004225022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004225022.1;locus_tag=NLI98_RS26250;product=nucleotide-binding protein;protein_id=WP_004225022.1;transl_table=11 NZ_CP100602.1 RefSeq gene 152663 154888 . - . ID=gene-NLI98_RS26255;Name=NLI98_RS26255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26255;old_locus_tag=NLI98_26240 NZ_CP100602.1 Protein Homology CDS 152663 154888 . - 0 ID=cds-WP_004215174.1;Parent=gene-NLI98_RS26255;Dbxref=Genbank:WP_004215174.1;Name=WP_004215174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001723877.1;locus_tag=NLI98_RS26255;product=P-loop NTPase fold protein;protein_id=WP_004215174.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 154890 155805 . - . ID=gene-NLI98_RS26260;Name=NLI98_RS26260;end_range=155805,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS26260;old_locus_tag=NLI98_26245;partial=true;pseudo=true NZ_CP100602.1 Protein Homology CDS 154890 155805 . - 0 ID=cds-NLI98_RS26260;Parent=gene-NLI98_RS26260;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=155805,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000952217.1;locus_tag=NLI98_RS26260;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq gene 156077 156538 . - . ID=gene-NLI98_RS26265;Name=NLI98_RS26265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26265;old_locus_tag=NLI98_26250 NZ_CP100602.1 Protein Homology CDS 156077 156538 . - 0 ID=cds-WP_004215188.1;Parent=gene-NLI98_RS26265;Dbxref=Genbank:WP_004215188.1;Name=WP_004215188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004215188.1;locus_tag=NLI98_RS26265;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_004215188.1;transl_table=11 NZ_CP100602.1 RefSeq gene 156654 157601 . + . ID=gene-NLI98_RS26270;Name=NLI98_RS26270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26270;old_locus_tag=NLI98_26255 NZ_CP100602.1 Protein Homology CDS 156654 157601 . + 0 ID=cds-WP_004215186.1;Parent=gene-NLI98_RS26270;Dbxref=Genbank:WP_004215186.1;Name=WP_004215186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004215186.1;locus_tag=NLI98_RS26270;product=DMT family transporter;protein_id=WP_004215186.1;transl_table=11 NZ_CP100602.1 RefSeq gene 157937 158932 . + . ID=gene-NLI98_RS26275;Name=NLI98_RS26275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26275;old_locus_tag=NLI98_26260 NZ_CP100602.1 Protein Homology CDS 157937 158932 . + 0 ID=cds-WP_029884700.1;Parent=gene-NLI98_RS26275;Dbxref=Genbank:WP_029884700.1;Name=WP_029884700.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000484486.1;locus_tag=NLI98_RS26275;product=IS110 family transposase;protein_id=WP_029884700.1;transl_table=11 NZ_CP100602.1 RefSeq gene 159138 160151 . - . ID=gene-NLI98_RS26280;Name=NLI98_RS26280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26280;old_locus_tag=NLI98_26265 NZ_CP100602.1 Protein Homology CDS 159138 160151 . - 0 ID=cds-WP_004210218.1;Parent=gene-NLI98_RS26280;Dbxref=Genbank:WP_004210218.1;Name=WP_004210218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004210218.1;locus_tag=NLI98_RS26280;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_004210218.1;transl_table=11 NZ_CP100602.1 RefSeq gene 160264 160791 . + . ID=gene-NLI98_RS26285;Name=NLI98_RS26285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26285;old_locus_tag=NLI98_26270 NZ_CP100602.1 Protein Homology CDS 160264 160791 . + 0 ID=cds-WP_004210220.1;Parent=gene-NLI98_RS26285;Dbxref=Genbank:WP_004210220.1;Name=WP_004210220.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024260.2;locus_tag=NLI98_RS26285;product=cupin domain-containing protein;protein_id=WP_004210220.1;transl_table=11 NZ_CP100602.1 RefSeq gene 160805 163762 . + . ID=gene-NLI98_RS26290;Name=NLI98_RS26290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26290;old_locus_tag=NLI98_26275 NZ_CP100602.1 Protein Homology CDS 160805 163762 . + 0 ID=cds-WP_077250518.1;Parent=gene-NLI98_RS26290;Dbxref=Genbank:WP_077250518.1;Name=WP_077250518.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012606384.1;locus_tag=NLI98_RS26290;product=Tn3 family transposase;protein_id=WP_077250518.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 163881 164497 . + . ID=gene-NLI98_RS26295;Name=NLI98_RS26295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS26295;old_locus_tag=NLI98_26280;pseudo=true NZ_CP100602.1 Protein Homology CDS 163881 164497 . + 0 ID=cds-NLI98_RS26295;Parent=gene-NLI98_RS26295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004144374.1;locus_tag=NLI98_RS26295;product=recombinase family protein;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq gene 164604 165464 . + . ID=gene-NLI98_RS26300;Name=NLI98_RS26300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26300;old_locus_tag=NLI98_26285 NZ_CP100602.1 Protein Homology CDS 164604 165464 . + 0 ID=cds-WP_004144375.1;Parent=gene-NLI98_RS26300;Dbxref=Genbank:WP_004144375.1;Name=WP_004144375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001483142.1;locus_tag=NLI98_RS26300;product=alpha/beta hydrolase;protein_id=WP_004144375.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 165554 165759 . - . ID=gene-NLI98_RS26305;Name=NLI98_RS26305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS26305;old_locus_tag=NLI98_26290;partial=true;pseudo=true;start_range=.,165554 NZ_CP100602.1 Protein Homology CDS 165554 165759 . - 0 ID=cds-NLI98_RS26305;Parent=gene-NLI98_RS26305;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016189490.1;locus_tag=NLI98_RS26305;partial=true;product=recombinase family protein;pseudo=true;start_range=.,165554;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 165756 166739 . - . ID=gene-NLI98_RS26310;Name=NLI98_RS26310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS26310;old_locus_tag=NLI98_26295;pseudo=true NZ_CP100602.1 Protein Homology CDS 165756 166739 . - 0 ID=cds-NLI98_RS26310;Parent=gene-NLI98_RS26310;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=NLI98_RS26310;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq gene 167196 167831 . + . ID=gene-NLI98_RS26315;Name=NLI98_RS26315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26315;old_locus_tag=NLI98_26300 NZ_CP100602.1 Protein Homology CDS 167196 167831 . + 0 ID=cds-WP_011251321.1;Parent=gene-NLI98_RS26315;Dbxref=Genbank:WP_011251321.1;Name=WP_011251321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004210231.1;locus_tag=NLI98_RS26315;product=HAD-IB family hydrolase;protein_id=WP_011251321.1;transl_table=11 NZ_CP100602.1 RefSeq gene 168168 169409 . - . ID=gene-NLI98_RS26320;Name=NLI98_RS26320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26320;old_locus_tag=NLI98_26305 NZ_CP100602.1 Protein Homology CDS 168168 169409 . - 0 ID=cds-WP_029884674.1;Parent=gene-NLI98_RS26320;Dbxref=Genbank:WP_029884674.1;Name=WP_029884674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176934.1;locus_tag=NLI98_RS26320;product=VWA domain-containing protein;protein_id=WP_029884674.1;transl_table=11 NZ_CP100602.1 RefSeq gene 169494 170069 . - . ID=gene-NLI98_RS26325;Name=terE;gbkey=Gene;gene=terE;gene_biotype=protein_coding;locus_tag=NLI98_RS26325;old_locus_tag=NLI98_26310 NZ_CP100602.1 Protein Homology CDS 169494 170069 . - 0 ID=cds-WP_004026611.1;Parent=gene-NLI98_RS26325;Dbxref=Genbank:WP_004026611.1;Name=WP_004026611.1;gbkey=CDS;gene=terE;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309383.1;locus_tag=NLI98_RS26325;product=tellurium resistance cAMP binding protein TerE;protein_id=WP_004026611.1;transl_table=11 NZ_CP100602.1 RefSeq gene 170156 170734 . - . ID=gene-NLI98_RS26330;Name=terD;gbkey=Gene;gene=terD;gene_biotype=protein_coding;locus_tag=NLI98_RS26330;old_locus_tag=NLI98_26315 NZ_CP100602.1 Protein Homology CDS 170156 170734 . - 0 ID=cds-WP_004026609.1;Parent=gene-NLI98_RS26330;Dbxref=Genbank:WP_004026609.1;Name=WP_004026609.1;gbkey=CDS;gene=terD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309382.1;locus_tag=NLI98_RS26330;product=tellurium resistance membrane protein TerD;protein_id=WP_004026609.1;transl_table=11 NZ_CP100602.1 RefSeq gene 170773 171813 . - . ID=gene-NLI98_RS26335;Name=terC;gbkey=Gene;gene=terC;gene_biotype=protein_coding;locus_tag=NLI98_RS26335;old_locus_tag=NLI98_26320 NZ_CP100602.1 Protein Homology CDS 170773 171813 . - 0 ID=cds-WP_004026607.1;Parent=gene-NLI98_RS26335;Dbxref=Genbank:WP_004026607.1;Name=WP_004026607.1;gbkey=CDS;gene=terC;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309381.1;locus_tag=NLI98_RS26335;product=tellurium resistance membrane protein TerC;protein_id=WP_004026607.1;transl_table=11 NZ_CP100602.1 RefSeq gene 171837 172292 . - . ID=gene-NLI98_RS26340;Name=terB;gbkey=Gene;gene=terB;gene_biotype=protein_coding;locus_tag=NLI98_RS26340;old_locus_tag=NLI98_26325 NZ_CP100602.1 Protein Homology CDS 171837 172292 . - 0 ID=cds-WP_004026604.1;Parent=gene-NLI98_RS26340;Dbxref=Genbank:WP_004026604.1;Name=WP_004026604.1;gbkey=CDS;gene=terB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309380.1;locus_tag=NLI98_RS26340;product=tellurium resistance membrane protein TerB;protein_id=WP_004026604.1;transl_table=11 NZ_CP100602.1 RefSeq gene 172315 173466 . - . ID=gene-NLI98_RS26345;Name=terA;gbkey=Gene;gene=terA;gene_biotype=protein_coding;locus_tag=NLI98_RS26345;old_locus_tag=NLI98_26330 NZ_CP100602.1 Protein Homology CDS 172315 173466 . - 0 ID=cds-WP_023287201.1;Parent=gene-NLI98_RS26345;Dbxref=Genbank:WP_023287201.1;Name=WP_023287201.1;gbkey=CDS;gene=terA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309379.2;locus_tag=NLI98_RS26345;product=tellurium resistance system protein TerA;protein_id=WP_023287201.1;transl_table=11 NZ_CP100602.1 RefSeq gene 173463 174047 . - . ID=gene-NLI98_RS26350;Name=NLI98_RS26350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26350;old_locus_tag=NLI98_26335 NZ_CP100602.1 Protein Homology CDS 173463 174047 . - 0 ID=cds-WP_004210240.1;Parent=gene-NLI98_RS26350;Dbxref=Genbank:WP_004210240.1;Name=WP_004210240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540223.1;locus_tag=NLI98_RS26350;product=tellurium resistance TerZ family protein;protein_id=WP_004210240.1;transl_table=11 NZ_CP100602.1 RefSeq gene 174359 175417 . + . ID=gene-NLI98_RS26355;Name=NLI98_RS26355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26355;old_locus_tag=NLI98_26340 NZ_CP100602.1 Protein Homology CDS 174359 175417 . + 0 ID=cds-WP_023302789.1;Parent=gene-NLI98_RS26355;Dbxref=Genbank:WP_023302789.1;Name=WP_023302789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026600.1;locus_tag=NLI98_RS26355;product=ATP-grasp domain-containing protein;protein_id=WP_023302789.1;transl_table=11 NZ_CP100602.1 RefSeq gene 175429 176571 . + . ID=gene-NLI98_RS26360;Name=NLI98_RS26360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26360;old_locus_tag=NLI98_26345 NZ_CP100602.1 Protein Homology CDS 175429 176571 . + 0 ID=cds-WP_023287198.1;Parent=gene-NLI98_RS26360;Dbxref=Genbank:WP_023287198.1;Name=WP_023287198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001280121.1;locus_tag=NLI98_RS26360;product=phosphoribosyltransferase domain-containing protein;protein_id=WP_023287198.1;transl_table=11 NZ_CP100602.1 RefSeq gene 176564 177337 . + . ID=gene-NLI98_RS26365;Name=NLI98_RS26365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26365;old_locus_tag=NLI98_26350 NZ_CP100602.1 Protein Homology CDS 176564 177337 . + 0 ID=cds-WP_029884673.1;Parent=gene-NLI98_RS26365;Dbxref=Genbank:WP_029884673.1;Name=WP_029884673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839883.1;locus_tag=NLI98_RS26365;product=hypothetical protein;protein_id=WP_029884673.1;transl_table=11 NZ_CP100602.1 RefSeq gene 177339 178418 . + . ID=gene-NLI98_RS26370;Name=NLI98_RS26370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26370;old_locus_tag=NLI98_26355 NZ_CP100602.1 Protein Homology CDS 177339 178418 . + 0 ID=cds-WP_004210251.1;Parent=gene-NLI98_RS26370;Dbxref=Genbank:WP_004210251.1;Name=WP_004210251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181734.1;locus_tag=NLI98_RS26370;product=cysteine protease StiP family protein;protein_id=WP_004210251.1;transl_table=11 NZ_CP100602.1 RefSeq gene 178418 179374 . + . ID=gene-NLI98_RS26375;Name=NLI98_RS26375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26375;old_locus_tag=NLI98_26360 NZ_CP100602.1 Protein Homology CDS 178418 179374 . + 0 ID=cds-WP_014386544.1;Parent=gene-NLI98_RS26375;Dbxref=Genbank:WP_014386544.1;Name=WP_014386544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026594.1;locus_tag=NLI98_RS26375;product=HpcH/HpaI aldolase/citrate lyase family protein;protein_id=WP_014386544.1;transl_table=11 NZ_CP100602.1 RefSeq gene 179385 180608 . + . ID=gene-NLI98_RS26380;Name=NLI98_RS26380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26380;old_locus_tag=NLI98_26365 NZ_CP100602.1 Protein Homology CDS 179385 180608 . + 0 ID=cds-WP_029884672.1;Parent=gene-NLI98_RS26380;Dbxref=Genbank:WP_029884672.1;Name=WP_029884672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004210256.1;locus_tag=NLI98_RS26380;product=DUF4236 domain-containing protein;protein_id=WP_029884672.1;transl_table=11 NZ_CP100602.1 RefSeq gene 180611 181069 . + . ID=gene-NLI98_RS26385;Name=NLI98_RS26385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26385;old_locus_tag=NLI98_26370 NZ_CP100602.1 Protein Homology CDS 180611 181069 . + 0 ID=cds-WP_004026591.1;Parent=gene-NLI98_RS26385;Dbxref=Genbank:WP_004026591.1;Name=WP_004026591.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196888.1;locus_tag=NLI98_RS26385;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_004026591.1;transl_table=11 NZ_CP100602.1 RefSeq gene 181549 182187 . + . ID=gene-NLI98_RS26390;Name=NLI98_RS26390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26390;old_locus_tag=NLI98_26375 NZ_CP100602.1 Protein Homology CDS 181549 182187 . + 0 ID=cds-WP_004210261.1;Parent=gene-NLI98_RS26390;Dbxref=Genbank:WP_004210261.1;Name=WP_004210261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015731191.1;locus_tag=NLI98_RS26390;product=VWA domain-containing protein;protein_id=WP_004210261.1;transl_table=11 NZ_CP100602.1 RefSeq gene 182212 182853 . + . ID=gene-NLI98_RS26395;Name=NLI98_RS26395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26395;old_locus_tag=NLI98_26380 NZ_CP100602.1 Protein Homology CDS 182212 182853 . + 0 ID=cds-WP_004026586.1;Parent=gene-NLI98_RS26395;Dbxref=Genbank:WP_004026586.1;Name=WP_004026586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210396.1;locus_tag=NLI98_RS26395;product=TerD family protein;protein_id=WP_004026586.1;transl_table=11 NZ_CP100602.1 RefSeq gene 182854 183492 . + . ID=gene-NLI98_RS26400;Name=NLI98_RS26400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26400;old_locus_tag=NLI98_26385 NZ_CP100602.1 Protein Homology CDS 182854 183492 . + 0 ID=cds-WP_004210266.1;Parent=gene-NLI98_RS26400;Dbxref=Genbank:WP_004210266.1;Name=WP_004210266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013087240.1;locus_tag=NLI98_RS26400;product=VWA domain-containing protein;protein_id=WP_004210266.1;transl_table=11 NZ_CP100602.1 RefSeq gene 183585 184625 . + . ID=gene-NLI98_RS26405;Name=NLI98_RS26405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26405;old_locus_tag=NLI98_26390 NZ_CP100602.1 Protein Homology CDS 183585 184625 . + 0 ID=cds-WP_004210269.1;Parent=gene-NLI98_RS26405;Dbxref=Genbank:WP_004210269.1;Name=WP_004210269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026583.1;locus_tag=NLI98_RS26405;product=VWA domain-containing protein;protein_id=WP_004210269.1;transl_table=11 NZ_CP100602.1 RefSeq gene 184625 186358 . + . ID=gene-NLI98_RS26410;Name=NLI98_RS26410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26410;old_locus_tag=NLI98_26395 NZ_CP100602.1 Protein Homology CDS 184625 186358 . + 0 ID=cds-WP_029884671.1;Parent=gene-NLI98_RS26410;Dbxref=Genbank:WP_029884671.1;Name=WP_029884671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011251311.1;locus_tag=NLI98_RS26410;product=protein phosphatase 2C domain-containing protein;protein_id=WP_029884671.1;transl_table=11 NZ_CP100602.1 RefSeq gene 186386 187885 . + . ID=gene-NLI98_RS26415;Name=NLI98_RS26415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26415;old_locus_tag=NLI98_26400 NZ_CP100602.1 Protein Homology CDS 186386 187885 . + 0 ID=cds-WP_029884670.1;Parent=gene-NLI98_RS26415;Dbxref=Genbank:WP_029884670.1;Name=WP_029884670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303502.1;locus_tag=NLI98_RS26415;product=kinase;protein_id=WP_029884670.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 188020 188193 . - . ID=gene-NLI98_RS26420;Name=NLI98_RS26420;end_range=188193,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS26420;old_locus_tag=NLI98_26405;partial=true;pseudo=true NZ_CP100602.1 Protein Homology CDS 188020 188193 . - 0 ID=cds-NLI98_RS26420;Parent=gene-NLI98_RS26420;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=188193,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014386537.1;locus_tag=NLI98_RS26420;partial=true;product=EcsC family protein;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq gene 188277 189005 . - . ID=gene-NLI98_RS26425;Name=NLI98_RS26425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26425;old_locus_tag=NLI98_26410 NZ_CP100602.1 Protein Homology CDS 188277 189005 . - 0 ID=cds-WP_029884669.1;Parent=gene-NLI98_RS26425;Dbxref=Genbank:WP_029884669.1;Name=WP_029884669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540055.1;locus_tag=NLI98_RS26425;product=hypothetical protein;protein_id=WP_029884669.1;transl_table=11 NZ_CP100602.1 RefSeq gene 189022 189855 . - . ID=gene-NLI98_RS26430;Name=NLI98_RS26430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26430;old_locus_tag=NLI98_26415 NZ_CP100602.1 Protein Homology CDS 189022 189855 . - 0 ID=cds-WP_029884668.1;Parent=gene-NLI98_RS26430;Dbxref=Genbank:WP_029884668.1;Name=WP_029884668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012540133.1;locus_tag=NLI98_RS26430;product=GIY-YIG nuclease family protein;protein_id=WP_029884668.1;transl_table=11 NZ_CP100602.1 RefSeq gene 190192 190596 . - . ID=gene-NLI98_RS26435;Name=NLI98_RS26435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26435;old_locus_tag=NLI98_26420 NZ_CP100602.1 Protein Homology CDS 190192 190596 . - 0 ID=cds-WP_029884667.1;Parent=gene-NLI98_RS26435;Dbxref=Genbank:WP_029884667.1;Name=WP_029884667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016529521.1;locus_tag=NLI98_RS26435;product=DUF2251 domain-containing protein;protein_id=WP_029884667.1;transl_table=11 NZ_CP100602.1 RefSeq gene 190655 190933 . - . ID=gene-NLI98_RS26440;Name=NLI98_RS26440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26440;old_locus_tag=NLI98_26425 NZ_CP100602.1 Protein Homology CDS 190655 190933 . - 0 ID=cds-WP_004210285.1;Parent=gene-NLI98_RS26440;Dbxref=Genbank:WP_004210285.1;Name=WP_004210285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000801915.1;locus_tag=NLI98_RS26440;product=DUF1778 domain-containing protein;protein_id=WP_004210285.1;transl_table=11 NZ_CP100602.1 RefSeq gene 191027 191239 . - . ID=gene-NLI98_RS26445;Name=NLI98_RS26445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26445;old_locus_tag=NLI98_26430 NZ_CP100602.1 Protein Homology CDS 191027 191239 . - 0 ID=cds-WP_004210286.1;Parent=gene-NLI98_RS26445;Dbxref=Genbank:WP_004210286.1;Name=WP_004210286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004210286.1;locus_tag=NLI98_RS26445;product=hypothetical protein;protein_id=WP_004210286.1;transl_table=11 NZ_CP100602.1 RefSeq gene 191771 192040 . - . ID=gene-NLI98_RS26450;Name=NLI98_RS26450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26450;old_locus_tag=NLI98_26435 NZ_CP100602.1 GeneMarkS-2+ CDS 191771 192040 . - 0 ID=cds-WP_071591895.1;Parent=gene-NLI98_RS26450;Dbxref=Genbank:WP_071591895.1;Name=WP_071591895.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS26450;product=hypothetical protein;protein_id=WP_071591895.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 192084 192194 . + . ID=gene-NLI98_RS26455;Name=NLI98_RS26455;end_range=192194,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS26455;old_locus_tag=NLI98_26440;partial=true;pseudo=true NZ_CP100602.1 Protein Homology CDS 192084 192194 . + 0 ID=cds-NLI98_RS26455;Parent=gene-NLI98_RS26455;Note=with GsiABD is involved in the transport of glutathione into the cell%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=192194,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118837.1;locus_tag=NLI98_RS26455;partial=true;product=glutathione ABC transporter permease GsiC;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq gene 192278 193948 . - . ID=gene-NLI98_RS26460;Name=NLI98_RS26460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26460;old_locus_tag=NLI98_26445 NZ_CP100602.1 Protein Homology CDS 192278 193948 . - 0 ID=cds-WP_004902261.1;Parent=gene-NLI98_RS26460;Dbxref=Genbank:WP_004902261.1;Name=WP_004902261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902261.1;locus_tag=NLI98_RS26460;product=AMP-binding protein;protein_id=WP_004902261.1;transl_table=11 NZ_CP100602.1 RefSeq gene 193929 195194 . - . ID=gene-NLI98_RS26465;Name=NLI98_RS26465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26465;old_locus_tag=NLI98_26450 NZ_CP100602.1 Protein Homology CDS 193929 195194 . - 0 ID=cds-WP_004210292.1;Parent=gene-NLI98_RS26465;Dbxref=Genbank:WP_004210292.1;Name=WP_004210292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004210292.1;locus_tag=NLI98_RS26465;product=MSMEG_0569 family flavin-dependent oxidoreductase;protein_id=WP_004210292.1;transl_table=11 NZ_CP100602.1 RefSeq gene 195212 195502 . - . ID=gene-NLI98_RS26470;Name=NLI98_RS26470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26470;old_locus_tag=NLI98_26455 NZ_CP100602.1 Protein Homology CDS 195212 195502 . - 0 ID=cds-WP_011154627.1;Parent=gene-NLI98_RS26470;Dbxref=Genbank:WP_011154627.1;Name=WP_011154627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013512578.1;locus_tag=NLI98_RS26470;product=MSMEG_0570 family nitrogen starvation response protein;protein_id=WP_011154627.1;transl_table=11 NZ_CP100602.1 RefSeq gene 195514 196476 . - . ID=gene-NLI98_RS26475;Name=NLI98_RS26475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26475;old_locus_tag=NLI98_26460 NZ_CP100602.1 Protein Homology CDS 195514 196476 . - 0 ID=cds-WP_004210297.1;Parent=gene-NLI98_RS26475;Dbxref=Genbank:WP_004210297.1;Name=WP_004210297.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004210297.1;locus_tag=NLI98_RS26475;product=sll0787 family AIR synthase-like protein;protein_id=WP_004210297.1;transl_table=11 NZ_CP100602.1 RefSeq gene 196473 197036 . - . ID=gene-NLI98_RS26480;Name=NLI98_RS26480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26480;old_locus_tag=NLI98_26465 NZ_CP100602.1 Protein Homology CDS 196473 197036 . - 0 ID=cds-WP_004210298.1;Parent=gene-NLI98_RS26480;Dbxref=Genbank:WP_004210298.1;Name=WP_004210298.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902268.1;locus_tag=NLI98_RS26480;product=GNAT family N-acetyltransferase;protein_id=WP_004210298.1;transl_table=11 NZ_CP100602.1 RefSeq gene 197047 198156 . - . ID=gene-NLI98_RS26485;Name=NLI98_RS26485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26485;old_locus_tag=NLI98_26470 NZ_CP100602.1 Protein Homology CDS 197047 198156 . - 0 ID=cds-WP_004210300.1;Parent=gene-NLI98_RS26485;Dbxref=Genbank:WP_004210300.1;Name=WP_004210300.1;Ontology_term=GO:0009058,GO:0046500,GO:0051539;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=biosynthetic process|0009058||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004210300.1;locus_tag=NLI98_RS26485;product=MSMEG_0568 family radical SAM protein;protein_id=WP_004210300.1;transl_table=11 NZ_CP100602.1 RefSeq gene 198116 199117 . - . ID=gene-NLI98_RS26490;Name=NLI98_RS26490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26490;old_locus_tag=NLI98_26475 NZ_CP100602.1 Protein Homology CDS 198116 199117 . - 0 ID=cds-WP_004902273.1;Parent=gene-NLI98_RS26490;Dbxref=Genbank:WP_004902273.1;Name=WP_004902273.1;Ontology_term=GO:0009058,GO:0000257;gbkey=CDS;go_function=nitrilase activity|0000257||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902273.1;locus_tag=NLI98_RS26490;product=Nit6803 family nitriliase;protein_id=WP_004902273.1;transl_table=11 NZ_CP100602.1 RefSeq gene 199131 199613 . - . ID=gene-NLI98_RS26495;Name=NLI98_RS26495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26495;old_locus_tag=NLI98_26480 NZ_CP100602.1 Protein Homology CDS 199131 199613 . - 0 ID=cds-WP_004210304.1;Parent=gene-NLI98_RS26495;Dbxref=Genbank:WP_004210304.1;Name=WP_004210304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008920862.1;locus_tag=NLI98_RS26495;product=MSMEG_0572 family nitrogen starvation response protein;protein_id=WP_004210304.1;transl_table=11 NZ_CP100602.1 RefSeq gene 199980 201380 . + . ID=gene-NLI98_RS26500;Name=NLI98_RS26500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26500;old_locus_tag=NLI98_26485 NZ_CP100602.1 Protein Homology CDS 199980 201380 . + 0 ID=cds-WP_004210305.1;Parent=gene-NLI98_RS26500;Dbxref=Genbank:WP_004210305.1;Name=WP_004210305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004210305.1;locus_tag=NLI98_RS26500;product=PLP-dependent aminotransferase family protein;protein_id=WP_004210305.1;transl_table=11 NZ_CP100602.1 RefSeq gene 201989 202303 . + . ID=gene-NLI98_RS26505;Name=NLI98_RS26505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26505;old_locus_tag=NLI98_26490 NZ_CP100602.1 Protein Homology CDS 201989 202303 . + 0 ID=cds-WP_004186895.1;Parent=gene-NLI98_RS26505;Dbxref=Genbank:WP_004186895.1;Name=WP_004186895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118069.1;locus_tag=NLI98_RS26505;product=hypothetical protein;protein_id=WP_004186895.1;transl_table=11 NZ_CP100602.1 RefSeq gene 202546 203028 . - . ID=gene-NLI98_RS26510;Name=NLI98_RS26510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26510;old_locus_tag=NLI98_26495 NZ_CP100602.1 Protein Homology CDS 202546 203028 . - 0 ID=cds-WP_004210306.1;Parent=gene-NLI98_RS26510;Dbxref=Genbank:WP_004210306.1;Name=WP_004210306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118072.1;locus_tag=NLI98_RS26510;product=hypothetical protein;protein_id=WP_004210306.1;transl_table=11 NZ_CP100602.1 RefSeq gene 204244 205128 . + . ID=gene-NLI98_RS26515;Name=NLI98_RS26515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26515;old_locus_tag=NLI98_26500 NZ_CP100602.1 Protein Homology CDS 204244 205128 . + 0 ID=cds-WP_004210308.1;Parent=gene-NLI98_RS26515;Dbxref=Genbank:WP_004210308.1;Name=WP_004210308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004210308.1;locus_tag=NLI98_RS26515;product=RepB family plasmid replication initiator protein;protein_id=WP_004210308.1;transl_table=11 NZ_CP100602.1 RefSeq gene 205899 206732 . - . ID=gene-NLI98_RS26520;Name=NLI98_RS26520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26520;old_locus_tag=NLI98_26505 NZ_CP100602.1 Protein Homology CDS 205899 206732 . - 0 ID=cds-WP_004902281.1;Parent=gene-NLI98_RS26520;Dbxref=Genbank:WP_004902281.1;Name=WP_004902281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004902281.1;locus_tag=NLI98_RS26520;product=hypothetical protein;protein_id=WP_004902281.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 206995 207963 . + . ID=gene-NLI98_RS26525;Name=NLI98_RS26525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS26525;old_locus_tag=NLI98_26510;pseudo=true NZ_CP100602.1 Protein Homology CDS 206995 207963 . + 0 ID=cds-NLI98_RS26525;Parent=gene-NLI98_RS26525;Note=internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1;locus_tag=NLI98_RS26525;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq gene 208118 208372 . - . ID=gene-NLI98_RS26530;Name=NLI98_RS26530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26530;old_locus_tag=NLI98_26515 NZ_CP100602.1 Protein Homology CDS 208118 208372 . - 0 ID=cds-WP_004213836.1;Parent=gene-NLI98_RS26530;Dbxref=Genbank:WP_004213836.1;Name=WP_004213836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186931.1;locus_tag=NLI98_RS26530;product=Hha/YmoA family nucleoid-associated regulatory protein;protein_id=WP_004213836.1;transl_table=11 NZ_CP100602.1 RefSeq gene 208550 209686 . + . ID=gene-NLI98_RS26535;Name=NLI98_RS26535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26535;old_locus_tag=NLI98_26520 NZ_CP100602.1 Protein Homology CDS 208550 209686 . + 0 ID=cds-WP_004213833.1;Parent=gene-NLI98_RS26535;Dbxref=Genbank:WP_004213833.1;Name=WP_004213833.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004117850.1;locus_tag=NLI98_RS26535;product=tyrosine-type recombinase/integrase;protein_id=WP_004213833.1;transl_table=11 NZ_CP100602.1 RefSeq gene 209752 210069 . - . ID=gene-NLI98_RS26540;Name=NLI98_RS26540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26540;old_locus_tag=NLI98_26525 NZ_CP100602.1 Protein Homology CDS 209752 210069 . - 0 ID=cds-WP_004213829.1;Parent=gene-NLI98_RS26540;Dbxref=Genbank:WP_004213829.1;Name=WP_004213829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004026552.1;locus_tag=NLI98_RS26540;product=hypothetical protein;protein_id=WP_004213829.1;transl_table=11 NZ_CP100602.1 RefSeq gene 210221 210544 . - . ID=gene-NLI98_RS26545;Name=NLI98_RS26545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26545;old_locus_tag=NLI98_26530 NZ_CP100602.1 Protein Homology CDS 210221 210544 . - 0 ID=cds-WP_004197568.1;Parent=gene-NLI98_RS26545;Dbxref=Genbank:WP_004197568.1;Name=WP_004197568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004117846.1;locus_tag=NLI98_RS26545;product=hypothetical protein;protein_id=WP_004197568.1;transl_table=11 NZ_CP100602.1 RefSeq gene 210829 211299 . - . ID=gene-NLI98_RS26550;Name=NLI98_RS26550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26550;old_locus_tag=NLI98_26535 NZ_CP100602.1 GeneMarkS-2+ CDS 210829 211299 . - 0 ID=cds-WP_004902291.1;Parent=gene-NLI98_RS26550;Dbxref=Genbank:WP_004902291.1;Name=WP_004902291.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=NLI98_RS26550;product=hypothetical protein;protein_id=WP_004902291.1;transl_table=11 NZ_CP100602.1 RefSeq gene 211296 212255 . - . ID=gene-NLI98_RS26555;Name=NLI98_RS26555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26555;old_locus_tag=NLI98_26540 NZ_CP100602.1 Protein Homology CDS 211296 212255 . - 0 ID=cds-WP_011154511.1;Parent=gene-NLI98_RS26555;Dbxref=Genbank:WP_011154511.1;Name=WP_011154511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011251302.1;locus_tag=NLI98_RS26555;product=hypothetical protein;protein_id=WP_011154511.1;transl_table=11 NZ_CP100602.1 RefSeq gene 212298 212705 . - . ID=gene-NLI98_RS26560;Name=NLI98_RS26560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26560;old_locus_tag=NLI98_26545 NZ_CP100602.1 Protein Homology CDS 212298 212705 . - 0 ID=cds-WP_004186937.1;Parent=gene-NLI98_RS26560;Dbxref=Genbank:WP_004186937.1;Name=WP_004186937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004181761.1;locus_tag=NLI98_RS26560;product=hypothetical protein;protein_id=WP_004186937.1;transl_table=11 NZ_CP100602.1 RefSeq gene 212715 213158 . - . ID=gene-NLI98_RS26565;Name=NLI98_RS26565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26565;old_locus_tag=NLI98_26550 NZ_CP100602.1 Protein Homology CDS 212715 213158 . - 0 ID=cds-WP_004213821.1;Parent=gene-NLI98_RS26565;Dbxref=Genbank:WP_004213821.1;Name=WP_004213821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004213821.1;locus_tag=NLI98_RS26565;product=hypothetical protein;protein_id=WP_004213821.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 213179 214254 . - . ID=gene-NLI98_RS26570;Name=NLI98_RS26570;end_range=214254,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS26570;old_locus_tag=NLI98_26555;partial=true;pseudo=true NZ_CP100602.1 Protein Homology CDS 213179 214254 . - 0 ID=cds-NLI98_RS26570;Parent=gene-NLI98_RS26570;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=214254,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611434.1;locus_tag=NLI98_RS26570;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq gene 214422 215390 . + . ID=gene-NLI98_RS26575;Name=NLI98_RS26575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26575;old_locus_tag=NLI98_26560 NZ_CP100602.1 Protein Homology CDS 214422 215390 . + 0 ID=cds-WP_004213807.1;Parent=gene-NLI98_RS26575;Dbxref=Genbank:WP_004213807.1;Name=WP_004213807.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031967.1;locus_tag=NLI98_RS26575;product=IS110 family transposase;protein_id=WP_004213807.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 215409 215573 . - . ID=gene-NLI98_RS26580;Name=NLI98_RS26580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS26580;old_locus_tag=NLI98_26565;partial=true;pseudo=true;start_range=.,215409 NZ_CP100602.1 Protein Homology CDS 215409 215573 . - 0 ID=cds-NLI98_RS26580;Parent=gene-NLI98_RS26580;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612175.1;locus_tag=NLI98_RS26580;partial=true;product=transposase;pseudo=true;start_range=.,215409;transl_table=11 NZ_CP100602.1 RefSeq gene 215659 217251 . - . ID=gene-NLI98_RS26585;Name=NLI98_RS26585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26585;old_locus_tag=NLI98_26570 NZ_CP100602.1 Protein Homology CDS 215659 217251 . - 0 ID=cds-WP_004902302.1;Parent=gene-NLI98_RS26585;Dbxref=Genbank:WP_004902302.1;Name=WP_004902302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839879.1;locus_tag=NLI98_RS26585;product=IS66-like element ISKox1 family transposase;protein_id=WP_004902302.1;transl_table=11 NZ_CP100602.1 RefSeq gene 217282 217632 . - . ID=gene-NLI98_RS26590;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=NLI98_RS26590;old_locus_tag=NLI98_26575 NZ_CP100602.1 Protein Homology CDS 217282 217632 . - 0 ID=cds-WP_004189161.1;Parent=gene-NLI98_RS26590;Dbxref=Genbank:WP_004189161.1;Name=WP_004189161.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309365.1;locus_tag=NLI98_RS26590;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_004189161.1;transl_table=11 NZ_CP100602.1 RefSeq gene 217629 218069 . - . ID=gene-NLI98_RS26595;Name=NLI98_RS26595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26595;old_locus_tag=NLI98_26580 NZ_CP100602.1 Protein Homology CDS 217629 218069 . - 0 ID=cds-WP_004215130.1;Parent=gene-NLI98_RS26595;Dbxref=Genbank:WP_004215130.1;Name=WP_004215130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026046.1;locus_tag=NLI98_RS26595;product=transposase;protein_id=WP_004215130.1;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 218154 218448 . + . ID=gene-NLI98_RS26600;Name=NLI98_RS26600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS26600;old_locus_tag=NLI98_26585;partial=true;pseudo=true;start_range=.,218154 NZ_CP100602.1 Protein Homology CDS 218154 218448 . + 0 ID=cds-NLI98_RS26600;Parent=gene-NLI98_RS26600;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152715.1;locus_tag=NLI98_RS26600;partial=true;product=DUF4113 domain-containing protein;pseudo=true;start_range=.,218154;transl_table=11 NZ_CP100602.1 RefSeq pseudogene 218527 218755 . + . ID=gene-NLI98_RS26605;Name=NLI98_RS26605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=NLI98_RS26605;old_locus_tag=NLI98_26590;pseudo=true NZ_CP100602.1 Protein Homology CDS 218527 218755 . + 0 ID=cds-NLI98_RS26605;Parent=gene-NLI98_RS26605;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004118081.1;locus_tag=NLI98_RS26605;product=type II toxin-antitoxin system Phd/YefM family antitoxin;pseudo=true;transl_table=11 NZ_CP100602.1 RefSeq gene 219697 220668 . - . ID=gene-NLI98_RS26610;Name=NLI98_RS26610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=NLI98_RS26610;old_locus_tag=NLI98_26595 NZ_CP100602.1 Protein Homology CDS 219697 220668 . - 0 ID=cds-WP_004117790.1;Parent=gene-NLI98_RS26610;Dbxref=Genbank:WP_004117790.1;Name=WP_004117790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000817038.1;locus_tag=NLI98_RS26610;product=ParB/RepB/Spo0J family plasmid partition protein;protein_id=WP_004117790.1;transl_table=11 NZ_CP100602.1 RefSeq gene 220668 221834 . - . ID=gene-NLI98_RS26615;Name=sopA;gbkey=Gene;gene=sopA;gene_biotype=protein_coding;locus_tag=NLI98_RS26615;old_locus_tag=NLI98_26600 NZ_CP100602.1 Protein Homology CDS 220668 221834 . - 0 ID=cds-WP_004211841.1;Parent=gene-NLI98_RS26615;Dbxref=Genbank:WP_004211841.1;Name=WP_004211841.1;gbkey=CDS;gene=sopA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_052640.1;locus_tag=NLI98_RS26615;product=plasmid-partitioning protein SopA;protein_id=WP_004211841.1;transl_table=11 ###