CTM43_RS26385 NONE
CTM43_RS00015 NONE
CTM43_RS27745 NONE
CTM43_RS26390    2495 ..    2509 +  -2.1  -3.01791   CGGCATGGCAGTCAC              CG-TGC AGGC GCAACG               TGTTCCCGCGGCCGT  42 86
CTM43_RS27755 NONE
CTM43_RS27760    3190 ..    3205 +    -6  -4.16681   TTTATTACCCCGCGG              GCGCGC AGCA GCGCGG               TTTTAAAGTCCTCTT  69 28
CTM43_RS27765 NONE
        mobA NONE
CTM43_RS27770 NONE
CTM43_RS00040 NONE
CTM43_RS26410 NONE
CTM43_RS26415 NONE
CTM43_RS26420 NONE
CTM43_RS27775 NONE
CTM43_RS27780 NONE
CTM43_RS26430 NONE
CTM43_RS27785 NONE
CTM43_RS26435 NONE
CTM43_RS27790    9253 ..    9273 +  -5.3  -3.60475   CAGTTTCGAATGCAG            TTCCCAGGT TGA GCCCGGGGA            TTTCACATCCGACTT  56 96
CTM43_RS26445 NONE
CTM43_RS27795 NONE
       virB9 NONE
CTM43_RS00065 NONE
CTM43_RS26455 NONE
CTM43_RS27805 NONE
CTM43_RS00070 NONE
CTM43_RS26460 NONE
      virB11 NONE
CTM43_RS27815 NONE
CTM43_RS27820 NONE
CTM43_RS26470 NONE
CTM43_RS27825   15892 ..   15906 +  -7.1  -2.61264   CCCGATGCCAAACCA               GCCGA ACAGA TCGGC               ATTATCGCTAAAGCC  56 7
CTM43_RS27830 NONE
CTM43_RS27835   16691 ..   16732 + -10.8  -4.19238   CGACCTTTTGCTGGT TGCCG-CCGGAGAGCAGGC CGATC GCCTGCTCCATGGACGGCG TTTTCACGTTAAACA  87 78
CTM43_RS27840 NONE
CTM43_RS27845 NONE
CTM43_RS27850   18515 ..   18540 +  -3.1  -3.55071   GACATCAGATTTCGA         CCTGGGTACCG AGCT CGATAACCCGG          TTTGGCGGGATCTCA  49 14
CTM43_RS27855 NONE
CTM43_RS26490 NONE
CTM43_RS26495 NONE
CTM43_RS27860 NONE
CTM43_RS26500 NONE
CTM43_RS27865 NONE
CTM43_RS26505 NONE
CTM43_RS27870 NONE
        ravA NONE
CTM43_RS27875 NONE
CTM43_RS26510 NONE
CTM43_RS26515 NONE
        viaA   23732 ..   23745 +  -9.5  -3.55444   CTTCATCGCCGGTCA               GCGCC AGCT GGCGC                TTTAGCGCCTCGGCG  74 223
        asnC NONE
        mioC NONE
CTM43_RS27900 NONE
CTM43_RS26525 NONE
CTM43_RS26530 NONE
CTM43_RS26535 NONE
CTM43_RS26540 NONE
CTM43_RS26545 NONE
        mnmG NONE
CTM43_RS26550 NONE
CTM43_RS00140 NONE
CTM43_RS26555 NONE
CTM43_RS00145 NONE
CTM43_RS26560 NONE
CTM43_RS00150 NONE
CTM43_RS00155   30775 ..   30799 +  -2.8   -2.6563   TGTAGGTCTGGGTCT          GTACGTGATG TTCGC CGTCGCGTAG          TAAGTTGTTAGAAAC  41 1
CTM43_RS00160 NONE
CTM43_RS27935 NONE
CTM43_RS00165 NONE
CTM43_RS27940 NONE
        atpA NONE
CTM43_RS27950 NONE
CTM43_RS00175   34334 ..   34344 +    -4  -3.73968   GGGGCCGCCGCGGTT                 TAAC CAG GTTA                 TTTCGTAGAGGATTT  55 23
        atpD NONE
CTM43_RS00185   36206 ..   36228 + -15.6   -5.7946   GCTTGAACGTAAAAA           GCCAGTCTGG GTT CCAGGCTGGC           TTTTTTTATTGCCCG 100 46
CTM43_RS27960 NONE
        glmU NONE
CTM43_RS27965   38404 ..   38416 +  -4.8  -3.30635   GTCAGCGACAACGCA                TGGC ATATC GCCA                TTATCAGGAAATTTA  52 132
CTM43_RS27975 NONE
        glmS   40283 ..   40301 + -13.8  -5.27938   ATCCTATCCTGCAAA             GGGCTGCC GAC GGCGGCCC             TTTTTATTTGCACCT 100 44
        pstS   41707 ..   41732 +  -5.9  -4.15222   ACGGTTCAGACTGTA         GGCCCGGGAGC CAAC GCCACCGGGCA          TTTATTCGAACAAGT  69 91
        pstC NONE
        pstA NONE
        pstB NONE
CTM43_RS26635 NONE
        phoU NONE
CTM43_RS28005 NONE
CTM43_RS28010 NONE
CTM43_RS28015 NONE
CTM43_RS26640 NONE
CTM43_RS26645 NONE
CTM43_RS00235 NONE
CTM43_RS26650 NONE
CTM43_RS26655 NONE
CTM43_RS00240 NONE
CTM43_RS26660 NONE
CTM43_RS00245 NONE
CTM43_RS26665 NONE
CTM43_RS00260   51575 ..   51594 +   -15  -5.75599   ACGCATGATGAAAAA            GCCCGGCA TCGC TGCCGGGC             TTTTTTTATGCTTTA 100 46
CTM43_RS26710   59453 ..   59463 +  -2.4  -5.06414   GATTGCGTTCATGTG                 CGCG TTT CACG                 TTTTTCTTGGCGACG  77 230
        dnaA NONE
CTM43_RS00320 NONE
CTM43_RS26740 NONE
        recF NONE
CTM43_RS26750 NONE
        gyrB NONE
CTM43_RS26755   66808 ..   66821 +  -2.4  -3.01712   GGAATCGCGTTAGCA               TGAG GGGAGA CTCA                TCTTACCCGGGGACC  42 45
CTM43_RS00335   67662 ..   67681 + -12.8  -3.38475   CGTAAACTTCTTTCC            GGCCCGGC GTTC GCCGGGTC             TGTCTTCTCTTTTTT  87 36
CTM43_RS26770 NONE
CTM43_RS00340   68867 ..   68877 +  -6.8  -4.08394   GTTTCTTTATTGCCG                 GCGA GTA TCGC                 TTTTGAGCCGACTGT  68 9
CTM43_RS00345 NONE
CTM43_RS26785 NONE
CTM43_RS00350 NONE
CTM43_RS26790 NONE
CTM43_RS00355 NONE
CTM43_RS00360 NONE
CTM43_RS26810 NONE
CTM43_RS00365   73593 ..   73641 +  -3.2   -3.5936   GATGCGTTGGCTGCA TTTTCTTA-CCCTGGTCACATAC TATT GTATGCTCCCAGGGATGCGAAAA TTTGCCGCCTTTCCC  50 65
CTM43_RS00370   75086 ..   75112 + -13.8  -2.82516   TTTTGCGATACGCTA         CCCTGATGCG TAAGTCT CGCATCAGGG         TATCGTCATGAAACA  85 43
CTM43_RS00375   76749 ..   76792 +  -3.8  -4.93296   GGCCATCCCGTGAAT GCATAGTGTTAT-TGCGCCGC ACT GTGGCGGGCATCGCACTTTGC TTTTTGTGCTCCTCC  78 428
CTM43_RS00385   77421 ..   77435 + -12.8  -2.62396   TAATTGTCCGTTTCA               GGCCGC GTG GCGGCC               TGATGTAACAACCTG  81 38
        ibpB   77974 ..   77990 + -13.7  -5.36441   CGAATAACTTATAAG              GCCCCGA TTT TCGGGGC              TTTTTTGTGTGCGAG 100 46
CTM43_RS00400   81160 ..   81171 +  -2.2  -3.78953   CTTCCGCCAGGCCGG                TCAG ATTG CTGG                 TTTCATGATGGACGT  51 508
CTM43_RS00410 NONE
CTM43_RS00415   84646 ..   84667 + -18.7  -3.79678   ATCCCCGTTGTAATA           CCGGCGCCC TGCG GGGCGCCGG            TTCTTCTCCCCGGTT 100 40
CTM43_RS00420 NONE
CTM43_RS00425 NONE
CTM43_RS00430   85981 ..   86023 +  -8.9   -3.1552   CTCTTCCGGCACCAT GCCGCCGCCGGTGGCCCAC ACCAG GTGGGTGGCCTGCTGCAGC TGTTGCTCACTCAGC  67 77
CTM43_RS26885   87367 ..   87384 +  -6.9  -2.93623   TACTTGAACGTTTCA             CTGAGGC TGGC GCCGCAG              TACTGTTTTACCAGC  55 112
CTM43_RS26895   87936 ..   87949 +  -8.1  -2.76815   CAGCGTAGCGCCGAG               CGACG GCAG CGTCG                ATTCTTCGCGAACGT  59 125
CTM43_RS26900   88191 ..   88204 +  -2.4  -3.59495   CAGCGGAATAGCCAG               CTTC AGCAGC GAAG                TATTGGTTTTTTTGG  47 44
CTM43_RS26910 NONE
        dsdC   89891 ..   89924 +  -2.9  -3.30441   GGTAGCCCGGATAAG     GCGTCAGCCGCCATCC GGG GAACGGCCGCCG-CGC     TTATACCGGCTGCTG  47 151
CTM43_RS26935   92452 ..   92480 +  -5.1  -2.71712   CGCATACCCCTACCA        GCTGGTGGTTGAC GAA GGCGCCCAGCAGC        GTTTCGCCCGGCGCG  48 147
CTM43_RS26940 NONE
        ivbL   93596 ..   93620 + -10.7   -5.4505   AACACGAATTCCAAA         CCCCGC-CGG CGCAAA CCGAGCGGGG          TTTTTTGTTGGCGAG 100 51
CTM43_RS00475 NONE
CTM43_RS00480   95718 ..   95763 +   -15  -3.53444   TGCCGGATGACGCTG CG-CTTATCCGGCCTACAGG CAGTGAAT CC-GTAGGCCGGATAAGGCG TTTACGCCGCCATCC  93 89
        uhpA NONE
        uhpB NONE
CTM43_RS26975 NONE
CTM43_RS00495   99294 ..   99327 +    -8  -4.62783   ATTTTCCCGGTTTTA     CCTGGACGCCGTCT CAGGCC AGACGGCGCGCTGG      TTTTTACAATGCCTG  81 82
CTM43_RS26980 NONE
CTM43_RS00500  100798 ..  100817 + -12.1  -5.80003   GTATTTGGTAACCTT            GCCCGGC CTTCGC GCCGGGC             TTTTTTATTTCTTGC 100 49
CTM43_RS00505  101777 ..  101797 +  -4.7  -5.10526   AGCGCTATGGATCGC            TTCGAAAGC CGG GCTTTTGTA            TTTATTTTTTGCTGT  83 439
        hisI NONE
        nepI NONE
CTM43_RS27000  104025 ..  104057 +    -7  -3.13403   CTTCAGGCCCTTGGC     GCGCAGCGTGG-CGAT GGT GTCGACCACGCCG-GC     TATTGGTGCGGAAAA  60 349
CTM43_RS00535 NONE
        phnR  106318 ..  106339 +  -2.9  -3.84772   GGCGGCATGACAGCC           TGCGGATCG AAGT CGATACCCA            TTGATTTTATTAGTT  55 0
        phnS NONE
        phnT NONE
        phnU NONE
CTM43_RS27030 NONE
        phnV NONE
CTM43_RS00565 NONE
        dksA NONE
CTM43_RS00570 NONE
CTM43_RS27040 NONE
CTM43_RS27045  112073 ..  112083 +  -2.6  -3.26298   CATGGTTATCTCGCT                 TTAA TAA TTAA                 TATATTTCAGATAAT  45 13
CTM43_RS27050  113107 ..  113127 +  -6.7  -3.53761   TGCGGCAGTACCGTG            CCAGCCGCC AGC GCCGCCTGG            TTTGCCGACAGGTTG  61 51
CTM43_RS27060 NONE
CTM43_RS00595 NONE
CTM43_RS27065 NONE
CTM43_RS00600 NONE
CTM43_RS27070 NONE
CTM43_RS00605 NONE
        hemB  119109 ..  119119 +  -2.4  -3.23708   GTCCGGCGAAATAGC                 GCCG AAT CCGC                 TCCTTTTTCCAGGAC  44 487
CTM43_RS00615 NONE
        ligK NONE
CTM43_RS00625 NONE
CTM43_RS00630  123183 ..  123193 +  -8.2  -3.96068   TCGCCAGCGTTGCTT                 CGCG GAC CGCG                 TTCTTGTTACCGTCG  71 109
        cadR  130823 ..  130845 +    -9  -2.56449   CCAGCTCTTTGGTGG           CGCGCAGGGC GAT GGCCTGGGCG           GTATTATCGTCCCCT  57 355
CTM43_RS00680  134705 ..  134719 +  -8.6   -2.8294   GTATCCCCGGGCGGT               CAGGTA CCG TACCTG               TGGTTGTGCCGGATG  62 49
CTM43_RS00695 NONE
CTM43_RS27170  137744 ..  137795 +  -7.3  -3.53012   GCATCGGCGATTCAA TGCGGATGATCGGCAGC-GCCGC CAGATCGC GCGGCCGCTGCGGCTCG-CCGTA TTTCGCCAGCAGCGC  64 98
CTM43_RS27175 NONE
CTM43_RS00705 NONE
CTM43_RS00710  139972 ..  139994 +  -7.6  -5.14563   CCGATGGTGAGATAG           GCGTTCGGCA CTT TGCCCATCGC           TTTTTTAATCCCGGC  91 485
CTM43_RS00720  141080 ..  141100 +  -6.8   -3.5393   ACACCGGGCGAGTGG           CGACGGGGC TAGC GCCTCG-CG            TTTCGCGAAGATGAT  61 14
        nlpA NONE
CTM43_RS00730  142966 ..  142994 +  -2.9  -4.08706   CCAGCGACAGCCCGT        CCGGCATCTCGCC GCG GGCGATCAGTTGG        TTTATCTCGTCGAAG  58 83
CTM43_RS00740  144380 ..  144394 +  -3.5  -3.10611   GTGAGTATCCCGCAG               GATGG AGAAA CCGTC               GTTTATTAACATGCG  46 2
CTM43_RS00745  145482 ..  145495 +  -5.9  -3.01712   GGATCAATTCGATAT               CGGCG ACGA TGCCG                TGTTCGGCGCAGAAG  48 129
CTM43_RS00755  147935 ..  147947 +  -3.3  -4.33675   ATGGCGCCGTAGTGT                TCGCC AAG GGTGG                TTTTGATAGTGTGGT  64 465
CTM43_RS27215 NONE
CTM43_RS27220 NONE
CTM43_RS00785 NONE
CTM43_RS27225 NONE
CTM43_RS27230 NONE
CTM43_RS00790  153723 ..  153745 + -15.6  -5.83226   GGTTAACAGCAGCAG           CCCTCTTCGC CAG GCGGAGAGGG           TTTTTTTATTCCATT 100 44
CTM43_RS00795 NONE
CTM43_RS27240  154998 ..  155010 + -10.5  -3.09327   CACTCCGGCATAGCC                GCCGG TGT CCGGC                TCTTCGATAAACTGG  72 194
CTM43_RS27250 NONE
CTM43_RS27255  157738 ..  157760 + -16.4  -3.31263   GGACTCGCACCCCAA           CTCTCTCCCT GAA AGGGAGAGAG           TTGTCAGAGTGGAGT 100 413
CTM43_RS27265  159109 ..  159134 + -11.1  -2.74248   TGACGCCGCCGGTGA         CGCGCTGCGCGC TGA GCGCCCAGC-CG         GTTTCCGGGCTGTTG  72 239
CTM43_RS27275  160703 ..  160715 +  -6.9  -4.08216   ATCATGGTGGGGACG                TCGGC GCC GCCGG                TTTTCAAGGCGGTAC  68 50
CTM43_RS27285 NONE
CTM43_RS27290 NONE
        gltS  162546 ..  162556 +  -3.2  -3.14132   CTGTACCTGCTGCTG                 CCGA TTT TTGG                 TTGATAAAAAACCCG  46 11
CTM43_RS27295 NONE
CTM43_RS27300 NONE
        zapB NONE
CTM43_RS00840 NONE
CTM43_RS27305 NONE
CTM43_RS27310 NONE
CTM43_RS00845 NONE
CTM43_RS27320 NONE
CTM43_RS27325 NONE
CTM43_RS00850 NONE
CTM43_RS27330  169682 ..  169696 +  -7.8  -2.60496   ACCGATGCACAGAAC               CGGGGT CAG ACCCTG               CTCTTTCAGCACCGC  58 243
CTM43_RS00865  171330 ..  171370 +  -8.2  -3.64984   GCTCCGCCGTCATAT GGCCCGGCCGGCGACGCAG ATGT TTG-GTCATCTGCCGGGTC  TCTTTTAACAGCTGT  66 52
CTM43_RS27355  174931 ..  174945 +  -2.8  -3.04461   TCCGGGGTGCTCATA               TCGC CCTGGAC GCGA               TATTCCGGGTGGATC  43 25
CTM43_RS27360 NONE
CTM43_RS27365  177107 ..  177135 +  -9.5  -3.51934   GCTGAGCGCGGATTT        GCGCGGTGGTG CTGCTTT CGCCGCCGTGC        TCTTTATAAGCCCAG  69 280
CTM43_RS27380  179002 ..  179014 + -10.5  -2.62184   TGCACTTCACCCGGA                CGCGG CGC CCGCG                TGGTATGGGAGACCG  69 62
        ligB NONE
CTM43_RS27395  181617 ..  181647 +  -5.3  -2.52896   CCAAACGTATCCATC      CG-CCGGCGC-CCGG CAG CCAGTGCGCCGGTCA      TGGCTTCCGCGGTGA  45 524
CTM43_RS00915  183615 ..  183629 +  -4.2  -4.14243   ATTTCCTGTTGCGCC               TGCCTG GTG TGGGCA               TTTTCACCTGCGATG  62 421
CTM43_RS27430  185867 ..  185880 +  -3.8  -4.41494   TGGCAGCGTTTACCA               GCTG TTTAGC CAGC                TTTTCGTTGAGGATG  68 470
CTM43_RS27440 NONE
CTM43_RS27445 NONE
CTM43_RS00940  188401 ..  188412 +  -2.2  -4.25104   AAGGGAAATGATATG                CGTA TGGA TGCG                 TTTTAATGCGAAAGC  57 98
CTM43_RS27450 NONE
CTM43_RS00945  189365 ..  189385 +  -2.7   -4.2586   ACCGTTTGATGTGGA            GATTATT GGCGATG AATAATC            TTTGTATTGATGTAA  62 7
CTM43_RS00950 NONE
CTM43_RS00955 NONE
CTM43_RS00960  192240 ..  192257 + -11.3  -5.82388   AAAATTAATGATTAA             GGCGACT GAGA AGTCGCC              TTTTTTTTGCGCTTT 100 33
CTM43_RS00965  192993 ..  193012 +   -15  -2.78934   CGTCTGATGATGCGC            CCGGCAGC CTCG GCTGCCGG             ATTTCCGCTATATCA  90 34
CTM43_RS27495  195651 ..  195669 +  -4.5  -4.67168   TTTTAGCGCCGCGAC             CCCGG CCACGATAT CCGGG             TTTTTAACCATTTTT  73 53
CTM43_RS27505 NONE
CTM43_RS00990 NONE
CTM43_RS00995 NONE
CTM43_RS27510 NONE
        rpmG  198045 ..  198072 +  -5.7  -2.68823   CACGTTATCTACAAA        GAAGCTAAAAT CAAATA ATTTTAGCCTC         CTTGTATAAAAACCC  51 8
CTM43_RS27515 NONE
CTM43_RS01005 NONE
CTM43_RS27520  199534 ..  199546 +  -5.5  -4.72986   AATGCGCTCATCAAG                GCTGA ACA TCGGC                TTTTTACTCGGGCTG  79 153
CTM43_RS27525  203176 ..  203207 + -10.8  -3.16689   CCCGATCGTCAATGT      GCAGCGTTTTTGCC AGCT GGCGCAGGCGCTGC       TCTTGCTCCGGTTTT  76 8
CTM43_RS27530 NONE
CTM43_RS27535 NONE
CTM43_RS01045 NONE
CTM43_RS27540  207460 ..  207471 +    -3  -3.53012   TGAGTTCTGGCATTA                TCAA TAAT TTGA                 TTTAGGGCAAAAACC  49 41
CTM43_RS27565  211351 ..  211391 +  -3.2  -4.36914   GGAGAACCAGGCTTT GCG-CCAGCGGCGGATCGCC ACC GG-GATCACCCGTTCGACGC TTTTATGCCAGGAGG  64 55
         kbl NONE
CTM43_RS01085  216022 ..  216037 + -11.8  -3.59293   AAATCAGCAAAAAAA              GGCGCC TGCG GGCGCC               TTAATTTAGATTTGG  83 59
CTM43_RS01090  216957 ..  216981 +  -8.5  -3.54741   CCTGAGTGGTCTAGT          TGCCGGGGTTG TCC CAGCCCTGCCA          TTTGAGGCGATAGTA  69 36
CTM43_RS27625  220412 ..  220422 +  -8.2  -3.85698   TGTACTGCTTTGCCG                 GCGG CAA CCGC                 TTTATCGACCGCGGC  73 286
CTM43_RS01110 NONE
CTM43_RS27630 NONE
CTM43_RS01115 NONE
CTM43_RS01120 NONE
CTM43_RS27635 NONE
CTM43_RS27640 NONE
CTM43_RS01125  223341 ..  223363 + -10.6  -2.83345   TGTCACCTGAATGAC           CCTGCCAG CGCAGAA CTGGCAGG           TCATTACTATATCGC  71 49
CTM43_RS01130  224281 ..  224313 + -14.9  -4.55128   TTAAGCGGCTCTCAG      AGCCTGGGTTCGGTA CTC TACCGGACTCAGGCC      TTTTAATTTCAGGCT 100 94
CTM43_RS27680  229646 ..  229662 +    -3  -4.36914   GATGATGTCGAACTG             TC-CGGT CTTC ACCGAGA              TTTTATAGACGAAGA  64 256
CTM43_RS01165  231160 ..  231174 +  -2.8  -3.97368   CGTTGAGCGCACCAT               CTGC TGGTAAC GCAG               TTTCTGCATTGCCAG  58 101
CTM43_RS27705  233278 ..  233292 +  -5.7    -4.015   CAGCTGCTCACCGGC               GAAGC GAATG GCTTC               TTCTTTGGTGGCTGC  66 247
        sopA NONE
CTM43_RS27720  235696 ..  235723 + -12.1  -4.46926   ATTAATGCGATCGGC        GGCAGGTTGAGC CGGAC GCTCA-CCTGCC        TTTTGTCCTGCCCTG  95 109
CTM43_RS01195  236452 ..  236483 +  -5.8  -2.52464   AATCGCCGCTGATTG      TTGACTCCCTCTCCC GTC GGGAGGGGG-GAAAA      TAACTTACCGCCAGG  50 77
CTM43_RS01200 NONE
        selB  239733 ..  239785 +  -8.3  -2.76815   GCGTTGTTCCGGTAA TCATTAACGTCGGCTCCCCGGCG GACTTCG TGCCGGGGAGCTGGCGAAAAGAA CTTGTTAAAACCACT  62 26
CTM43_RS01210  239929 ..  239952 +  -3.8  -2.52946   AGGATCAAAGCGCGG          GCAGGG-GATA TTC TGGCACCCTGC          GGTTTTATCCCCAGG  44 87
CTM43_RS01215  240669 ..  240679 +  -2.4  -4.57569   CCCCCGGCACCATCA                 GCAC GCC GCGC                 TTTTTCAGCCGCTGA  66 232
CTM43_RS01230  245105 ..  245126 +   -13  -5.44119   CATCTGTAATCCGGA           TGCCCGGC CTTGTC GCCGGGCA            TTTTTTTACCCTACA 100 32
CTM43_RS01255 NONE
        xylA  252174 ..  252201 + -10.5  -3.53012   AACCAGGATGCTCTG        TTCGCGCCACG CTCAGC CGTGGCGCGCG         TTTAAGGAGAGGGAG  77 74
CTM43_RS01265  253679 ..  253701 +   -17  -3.21199   ATGTCTTAGCCTCAG           TCCGTCCGGC AGC GCCGGGCGGA           TTCCCTTCCTGAATG 100 32
CTM43_RS01270 NONE
CTM43_RS01275  254693 ..  254716 +  -4.4  -3.05384   GCCTGAGACGTAAGT          CGGGCC-CCTC CGG GCGGCGGACCG          TTAGCTGACCAGCCG  47 28
CTM43_RS01285  256256 ..  256270 +  -4.9   -2.8194   TTTCGTACTGTATAT               CTCGC AGCCA GCGGG               TATACTGACTCCTTC  47 90
        glyQ NONE
CTM43_RS01300  259331 ..  259346 + -10.4  -5.28176   CGGTAATAATAAAGA              CCTGCC TCAG GGCAGG               TTTTTTATACGTGAA 100 47
CTM43_RS01305  260995 ..  261013 +    -3  -2.71144   CTCTGTACAGGGATT             CTATCAGG AAA CCTGAACG             TCGTTGGACACGCTC  41 46
CTM43_RS01310  261697 ..  261730 +  -5.3  -3.00022   TACGTGGTGGTTGTG     CTATTCTTGTAAAGC AAAT GCTATACAAGAGAGG      TGTGTATGAAATCAG  51 119
CTM43_RS01315 NONE
CTM43_RS01320  262673 ..  262695 +  -4.8   -4.0942   ATAGGGAACAAAAAA           GAGCCCATGT ATT AAATGGACTC           TTTCTCTGATGCCTC  62 223
        hokA  264160 ..  264181 + -10.1  -5.61881   ACCAAATAAATCCTT           TGCCTCCTG ATAT CAGGAGGCC            TTTTTATTTTTACAA 100 113
CTM43_RS01335  266047 ..  266066 +  -9.2  -3.47751   CGACAGATAAAAAAA            TCCCCGCC ATCA GGCAGGGA             TTCTCGATTCTTAGC  71 79
CTM43_RS01355 NONE
CTM43_RS01360  269662 ..  269693 + -14.4  -5.66684   AGGATGCAAAAAGAA      CCCGGG-GAGGGCGG TTG CCGCCGTTACCCGGG      TTTTTTTATGGCTTA 100 90
CTM43_RS01395  278456 ..  278485 +  -5.7  -3.68351   GAAGATAGACATCCC       G-TACTACCGCGAC GCT GTCGCGCCAGTAGC       TTTCGCTGATAAAAG  58 314
CTM43_RS01410  280085 ..  280097 +  -4.8  -4.57569   TCATTCCCCGCTGAT                GGCA GTTCA TGCC                TTTTTCCCCCACTGG  71 188
CTM43_RS01415  281565 ..  281581 +  -3.6  -5.06116   CCTACTGACTCGTGC              CACAGC GTCAG GCGGTG              TTTTATTCTTCTTTT  75 221
CTM43_RS01420  283346 ..  283374 + -16.8  -5.40474   CCCAGGATAAGCTAA       TCCCTCGC-CGGC TGAC GCCGCGCGAGGGA        TTTTTTTCGCACAGT 100 86
CTM43_RS01425  284917 ..  284931 +  -2.8  -5.03314   AGGCTGCTGAGTTTC               TCGC CGGTTGA GCGA               TTTTTTGAAAATAAG  74 71
CTM43_RS01430  285078 ..  285096 + -14.6   -5.1287   GACCAAATTCGAAAA             GCCTGCTC AAT GAGCAGGC             TTTTTTGCATCTGGG 100 36
CTM43_RS01445  288849 ..  288888 +  -8.5  -3.06315   GAATAATAAGCACGA  TGCCTGACCCCCTCTCCC CGCGT GGGAGAGGCGGG-GGGCG  TATTCCCGCTATTCC  63 35
        dppB NONE
        dppC NONE
CTM43_RS01460  291880 ..  291892 +  -6.9  -2.61264   ACCCACTCGATGATG                CCGGG AGG CCTGG                ATTATGAGTACGCAA  53 6
CTM43_RS01465  292916 ..  292939 +   -16  -3.48593   CACGCCTGATGGCGC          GCTCCCGGTC CCAT GGCCGGGAGC           TTCTCTCCCGCCGTG 100 32
CTM43_RS01470  293208 ..  293225 +  -4.1  -2.51547   CCTAAAAAATGGGGC             TACCCTT CTGC AAGGGAA              ATGTTAGTGTAGCGA  44 126
        bcsO NONE
        yhjQ NONE
        bcsA NONE
        bcsB NONE
CTM43_RS01495 NONE
CTM43_RS01500 NONE
CTM43_RS01505  304939 ..  304958 + -12.1  -3.47751   CGTCTCACGATGTAA            GGCCGCC AACATA GGCGGCC             TTGTCGCTTATTGCG  86 106
CTM43_RS01525  308754 ..  308765 +  -3.6  -3.25192   AGAAAAAATAAGGAA                GCCG GAGA TGGC                 TATTCTGGGATTACA  46 30
        bcsQ NONE
CTM43_RS01535 NONE
        bcsB NONE
CTM43_RS01545 NONE
        bcsC  319078 ..  319088 +  -8.2  -2.82516   AGCGCCACTCCGCGA                 CGCG CTT CGCG                 TATACTCGTGAGGCG  62 66
        hmsP NONE
CTM43_RS01560  322834 ..  322845 +  -4.4  -4.36262   ATGATTATTTTACGT                TGTC ATGC GACA                 TTTTCGTCTCCGTGT  65 130
CTM43_RS01565  324458 ..  324492 + -12.9  -3.86194   GGGCAGTAACCTAAC    GC-CTCTCCGACGCGCC AGC GGCG-GCCGGAGAGCGC    TTTGTGCGGAGAATT  93 32
CTM43_RS01580  328014 ..  328030 +  -3.5  -3.53012   ACCAGCAGCGGATTG              CCGGAGC CCA GCAGCGG              TTTAAAGGCGAACAG  49 358
CTM43_RS01600  332358 ..  332370 + -10.5  -3.55761   GCAGCTCCCCCTCCA                GCCGG AAG CCGGC                TTTGAGCAGTAACTG  71 155
CTM43_RS01620  336665 ..  336681 + -12.3  -4.91109   CTGAGCATAAAAAAA              GAAGCCC CCG GGGCTTC              TTTTTATCATCCGGC 100 37
CTM43_RS01635  340462 ..  340472 +  -4.6  -4.07568   CCGGCACGCTGCACT                 GCGT GTC GCGC                 TTTTCCGGCAACGGG  62 49
CTM43_RS01640 NONE
        rsmJ  343455 ..  343467 + -10.5  -3.30124   TATCTCCCGGATAGC                GGCGC AAC GCGCC                TTATCCGGGCTACCG  75 57
        uspB  346472 ..  346491 +   -15  -4.08767   TTCAGAATAAAAAAA            CGGGCCAG CAAG CTGGCCCG             TTTTGAACGAATAAC 100 44
CTM43_RS01670  349435 ..  349460 + -18.3   -2.9627   GAAGGGTAATCTACG         CGTCCGGGCGC CCTG GTGCCCGGACG          TATATGATCAGTTCA 100 32
CTM43_RS01680  351514 ..  351529 +  -3.2  -2.70932   ACACGTACGACAGGA              CGGC ATACCCGC GCCG               TGATTCCGGCGACGG  41 292
CTM43_RS01715  356924 ..  356947 + -10.2   -2.8805   CAATGGTGGAGAAGG          TCCAGGCGTC TCGC GGCGCCTGGC           TATCTCCGCCCTGAT  71 185
CTM43_RS01725  358358 ..  358379 +  -4.6  -3.71527   TGTTTATTAATAATT           TATTTCTT ATTCCG AAGAAATA            TTAATTTCTTAATAT  57 222
CTM43_RS01730 NONE
CTM43_RS01735 NONE
CTM43_RS01740 NONE
CTM43_RS01745 NONE
CTM43_RS01750  365201 ..  365231 +  -2.3  -2.85351   CGGGTCGTTTTCCTT       CAGTACCTGCCGC AATGA GCGTCTGGATCTG       TCTGGTGTGCGCCAG  40 8
        arnE  365534 ..  365548 +    -2  -2.83082   TCGTGGGCATTGTCA               TTCTGG GGA CCAGCG               TCTGATGGGCTTTTT  40 6
CTM43_RS01760  365933 ..  365946 +  -9.5  -4.07568   GGTGAAACGCCGCTA               GCCGG GGAG CCGGC                TTTTGGGACGGCCCG  81 25
CTM43_RS01770  368797 ..  368813 + -12.3  -4.20932   TTGCTCTCCGCTGCT              GCGCCAA CGG TTGGCGC              TTTTGAATCGCTGTT  90 489
        tusA  370272 ..  370304 + -14.9  -4.55128   TTAAGCGGCTCTCAG      AGCCTGGGTTCGGTA CTC TACCGGACTCAGGCC      TTTTAATTTCAGGCT 100 215
CTM43_RS01805  375651 ..  375663 +  -6.2  -4.20354   CCAGTTAGCCGGCAC                CGGC GGTAA GCCG                TTTTCGACTTCGCTT  69 403
        ftsY NONE
        ftsE NONE
        ftsX NONE
        rpoH  380741 ..  380762 + -10.1  -5.35224   CAGGCTCCCCGATAA           CGCCCC-GCC TCA GGTTGGGGCG           TTTTGTTTTTCTGCG 100 69
CTM43_RS01845  383707 ..  383718 +  -7.2  -3.57406   GAACAGAAACAGGAC                GCCG CAGC CGGC                 TGTTTATGCTCAGCG  64 75
CTM43_RS01850  385067 ..  385091 +  -7.8  -6.02919   AGGCTCTGTTTTGCA         CCGCGTCCGGT TCAT GCTGG-CGCGG          TTTTTTTATTTGTCA 100 43
CTM43_RS01855  386459 ..  386490 +  -8.6   -2.7976   GTCTGCGGCCCTCAA      CCCCGGTCACTTAC TGAT GTAAGCTCCCGGGG       ATTTCGGGTATTGAC  62 74
CTM43_RS01870  389116 ..  389136 + -19.7  -3.54459   AGACGAGTTATCCCT            CCGCCCGCG AAC CGCGGGCGG            TTTGAAAAAGGTTAC 100 48
        livH NONE
        livM  391349 ..  391362 +  -3.1  -2.90403   GGCGAAAGGAGAGCA               GGCATG AGT CA-GCC               ATTATTATCCGTTAG  42 19
CTM43_RS01885 NONE
        livF  392931 ..  392944 +  -8.1  -5.65177   CGAATACATTTAAAA               GAGCC TGTT GGCTC                TTTTTTTGTACATGT 100 122
CTM43_RS01895 NONE
CTM43_RS01900  393603 ..  393618 + -11.8  -3.85698   TTAACTCGTTGCAAC              CCGGCG GCTT CGCCGG               TTTGTAGCCCGGGCG  88 44
        ugpB  395230 ..  395257 +  -9.9  -2.76696   ATGTGCCCTATGTAG       GCCGGGTAAGGCG TAGC CGCC--ACCCGGC        ATTGTTCAGGAACCC  68 82
        ugpA NONE
        ugpE NONE
CTM43_RS01920 NONE
CTM43_RS01925  398964 ..  399008 +  -8.1  -3.81689   GGTTTTGCAAATGCT GC-TGCTGCGAGC-GGGTCTGA TTGT TCAGATCCTGCTT-CAGCATGC TTTGCTGCTGCTGTT  68 171
CTM43_RS01950  403774 ..  403784 +  -3.2  -2.65538   ACCCTTACCCGATAA                 GTCA AAT TGGC                 TCCTCTGCGCTTGTT  42 26
CTM43_RS01955  404619 ..  404652 + -21.2  -3.93695   CAGGTTAAATAAATT     GCGCAACCTTCCCT CATGTT AGGGAAGGTTGCGC      TTTGTCCGTGATAAA 100 54
        gntR  405822 ..  405878 +  -4.1  -2.71924   AATTAACCGATACGC CGCCTTCGCGCTGGATGAGTCAGCCCC GGC GCGGCGTACCAGTCCAGTGGGAGGACG CTTTGAGCACGACTA  44 147
CTM43_RS01965 NONE
CTM43_RS01970  407785 ..  407810 + -13.4   -3.9392   CGCGGGAAATAAAAA         GCCAGGGTAA CGCTGC TTACCCTGGC          TTCTTTGCAATAAAC  93 59
         asd  409340 ..  409356 +  -7.9  -6.11644   AGGATGAACAGAAAG              GGGGTCT TCA AGCCCCC              TTTTTTTTTGCGTAA 100 45
CTM43_RS01985 NONE
        glgX NONE
        glgC NONE
        glgA NONE
CTM43_RS02005  419012 ..  419029 + -14.1  -4.17296   GTCAATGCAACTCAA             CGGGGCC ATTT GGCCCCG              TTTCTGTCTGTGCGG 100 45
CTM43_RS02010 NONE
CTM43_RS02015  420215 ..  420230 +    -6   -4.2828   CCGCCGATATCGCCG              CCGGGG AGCA CCGCGG               TTTTGGTCCATGCCG  72 434
CTM43_RS02025 NONE
        glpG  422809 ..  422822 +  -3.8   -3.3422   GACTTACCGACAGGG               GTCG GGTAGG CGAC                ATTTTTCCAGGGATA  50 42
CTM43_RS02035  423676 ..  423690 +  -5.6  -3.96892   TACCGCGTCCTGCCG               GTGGGC GAC GCCCAG               TTTCTGATACAGGTT  64 101
CTM43_RS02045  426747 ..  426757 +  -6.8   -2.6252   AATTTTTAGCTACCG                 GAGG TAA CCTC                 TCAATTGTCATATCG  53 131
CTM43_RS02050 NONE
CTM43_RS02055  431494 ..  431520 + -16.5  -4.96848   ATGTCCGATAAAAAA         GGCCGGCCCGC TTCAC GCGGACCGGCC         TTTTTCTGTGGCGGG 100 79
        bioH NONE
CTM43_RS02080  435723 ..  435738 + -11.8  -4.76041   CCAGTCATAAGAAAA              CGGGCC TGCT GGCCCG               TTTTTCATAGCTGTC 100 42
CTM43_RS02110 NONE
        envZ  444277 ..  444292 + -11.8  -4.70879   GTTGCACAATAAAAA              GCCGGG CAAG CCCGGC               TTTTTCACCTTTGCG 100 68
        nudE  451382 ..  451395 +  -9.5  -5.60993   AGCAGCAATAAAAAA               GCGCC CGCA GGCGC                TTTTTTTGTCAGAAC 100 57
CTM43_RS02155  454861 ..  454877 +  -8.7   -3.4691   GCGCTGGGAGGCGGG              CGGCATG ACG CATGTCG              TTAATCTTCTTCCCT  69 5
CTM43_RS02160 NONE
CTM43_RS02165 NONE
CTM43_RS02170 NONE
        hofQ NONE
CTM43_RS02180 NONE
        aroK NONE
CTM43_RS02190  459318 ..  459333 + -11.8  -2.76037   CAATAAGAAGGTCTG              GCCGCG TTCG CGCGGC               GTTATCATTTCGGGT  76 35
        damX  460718 ..  460739 +  -4.4  -2.96899   AGGATGCTGTCGGAG           CTTTCTCC ACAGCC GGAGAACG            TGTAATTAGTTAGGC  47 64
CTM43_RS02200 NONE
CTM43_RS02205 NONE
CTM43_RS02210 NONE
        trpS  464050 ..  464070 + -16.9  -5.29782   ACGCAACAGCTAAAA            GGGCGGGAT GCT ATCCCGCCC            TTTTTTATGCCTGTC 100 44
CTM43_RS02235  470517 ..  470536 +  -4.8   -3.0976   CAGTTTACCGGCGTC            GCCGAGGC TCAT GCCCAGGC             TCTTCGCATATTCCG  47 484
CTM43_RS02245  472094 ..  472104 +  -8.2  -2.69151   GCTGCCCTAATCCTC                 CCGC GGC GCGG                 TGGTCTATCGCCGCG  61 31
CTM43_RS02250 NONE
CTM43_RS02255 NONE
CTM43_RS02260  473554 ..  473571 +  -2.7  -5.30686   TTGAAACGGTGATTT             TCAGTTG CTAT TGACTGA              TTTTTTATGCATATT  77 29
CTM43_RS02265  475181 ..  475199 +  -8.8  -3.37493   TTCGACGATAAACTG             GCTGTGCG TCA CCCACAGC             TTCATATCTTCCAGA  64 345
CTM43_RS02280  478354 ..  478370 + -15.1  -5.27477   TGTATCGAATCTCAA              CCCCGGC CAG GCCGGGG              TTTTTTGGTTAGCCT 100 55
CTM43_RS02300  481104 ..  481118 +  -5.7  -3.62096   ATCTTCCAGATCGCC               GTCGA ACGGC TCGAC               TTTACCATCGTGGAC  55 466
        kefG NONE
        kefB NONE
CTM43_RS02320 NONE
CTM43_RS02325  486085 ..  486098 +  -9.5  -5.42259   GAAGACGACAAAAAA               GCGGG GAAA CCCGC                TTTTTTTACGCCTCA 100 58
CTM43_RS02335  487393 ..  487418 + -18.3   -5.4505   AGTAATCAGGTTCAG         GCCGCCGTCTC GTCA GAGGCGGCGGC          TTTTTTATTGAGCGC 100 36
CTM43_RS02340 NONE
        tusD NONE
CTM43_RS02350 NONE
        tusB  489368 ..  489391 +  -4.6  -4.27007   CCGCCCTAAAATTCT          GCGTCCTCATA ATA TATGAGG-CGA          TTTATTACGTGTTTA  64 80
CTM43_RS02360 NONE
CTM43_RS02365  490399 ..  490435 + -10.8  -2.54896   TTCGGAGTCATAGTC   ACCAG-GCGGGCGCTTC AGAT GAGTCGCCCGCTCTGGA    TAACTTAACTGAACG  72 45
        fusA  492616 ..  492640 + -16.5  -2.78935   TAAAACCTAAGTCCC          GTGCTCTCTCC GAA GGGGAGAGCAC          TATAGTAAGGAATAT 100 51
         tuf  493867 ..  493882 + -11.8  -4.86133   GCTTTGAATTAAAAA              GGGCGC TTCG GCGCCC               TTTTTGCTGTCTGTC 100 48
CTM43_RS02380  494218 ..  494231 +  -3.1  -3.67188   TCAAAGAAATCGCCT               GAAGT CCAC GCTTC                TCTTTTGACATCCCT  51 24
CTM43_RS02385  494796 ..  494831 +  -7.3  -3.53712   CACCCGCACCAAAAA    CCCGCGGCCGCCAGG AATGGC CCAAACGGCAGCGGG     TTGCTTCTTCCCCAT  60 52
CTM43_RS02395 NONE
CTM43_RS02400 NONE
CTM43_RS02405 NONE
CTM43_RS02410 NONE
CTM43_RS02415 NONE
CTM43_RS02420 NONE
        rplV NONE
CTM43_RS02430 NONE
CTM43_RS02435 NONE
CTM43_RS02440 NONE
CTM43_RS02445  500600 ..  500625 + -14.9    -5.252   CATTCTCGATACGGA         TAAACGGCTCA GCGA TGAGCCGTTTA          TTTTTTCTACCCATA 100 50
CTM43_RS02450 NONE
CTM43_RS02455 NONE
CTM43_RS02460 NONE
CTM43_RS02465 NONE
CTM43_RS02470 NONE
CTM43_RS02475 NONE
CTM43_RS02480  503630 ..  503640 +  -3.2  -3.32963   ATGCTGCCCGTGAAG                 CTGG CCT TCAG                 TTCTAAGGTAGAGGT  48 9
        rpsE NONE
CTM43_RS02490 NONE
CTM43_RS02495 NONE
        secY NONE
CTM43_RS02505  506304 ..  506333 + -14.5   -4.6645   TTTCTTGCAAAGTTG       GATTGAGCTGGCTA GAT TAGCCAGC-CAATC       TTTTGTATGTCTGTA 100 55
CTM43_RS02510 NONE
CTM43_RS02515  507172 ..  507190 +  -6.6  -4.15508   CGTCCGCCGAAAAAA             CGTCGCGT ATA ACGCTGCG             TTTTCCAGGTTAGTT  71 14
CTM43_RS02520  507822 ..  507840 + -10.4  -3.14132   ACACCTGATCGTCGA             GCTTTACT CCA AGTAAAGC             TTAGTACCAAAGAGA  73 10
CTM43_RS02525 NONE
        rplQ  509292 ..  509321 + -16.7  -2.87931   TAATCTGTAGTAACG       TAAAAAAACCCGC CCTG GCGGGTTTTTTTA        TATCTACCCCATCCC 100 38
CTM43_RS02535 NONE
CTM43_RS02540  510208 ..  510218 +  -6.8  -3.95073   ACGCGCGGATCTACA                 CTCG CGC CGAG                 TTTATACATATACCG  66 49
CTM43_RS02545  510520 ..  510551 +  -5.9  -4.23104   AGAACTTCTTCTTTA     GAGGGGGCT--GGCG GTGC CGCCGGAGCCTCTTC      TTTCTTACGATTTAA  69 25
        dprA NONE
CTM43_RS02580  516929 ..  516941 +  -3.4  -3.29511   TTAATCTTTTTGCAG                CAAC ATCGA GTTG                TTATGACCAAATCAG  48 37
CTM43_RS02585 NONE
        tsaC NONE
CTM43_RS02595  518874 ..  518899 +  -5.5  -3.72576   ACGCTGCAGCAGGAA         CTGAAT-GCATG AAT CAGGCGATTCAG         TTTCCTGACCGGGAA  59 14
CTM43_RS02600  519254 ..  519267 +  -2.3  -4.30719   CCAAAGTAAAGGTAG               CCGCT TTCC AGCTG                TTTGTTCTGCGGAAC  62 140
CTM43_RS02610  521734 ..  521765 +  -8.2  -4.49756   TTGATAAATAATAAA      TTTCAAAATGTACT GCGA AGTGCATTGTGAAA       TTTTGCTCTTTAAAA  83 70
CTM43_RS02615  524821 ..  524833 +  -7.7  -3.05935   TGAGAGAATTTTCAG                CTCTG ATT CAGAG                TTGAGTACGCAATAT  60 55
         rrf NONE
CTM43_RS02625 NONE
         rrf  525250 ..  525283 + -24.1  -4.77867   CAGGCATCAAATAAA     GCAAAAGGCCCAGTC GAAA GACTGGGCCTTTTGC      TTTTGTGTTATCTGT 100 36
CTM43_RS02650  531486 ..  531511 +  -2.4  -4.52589   GCAGATAATAAAAAA         GGCGCTTCCC CATGCC GAAGAGCGCC          TTTTATATCAAGCAA  63 55
CTM43_RS02710 NONE
        csrD  542653 ..  542668 +  -4.7  -4.63542   GAACTGCACTAATTT              TCACC GCAGCA GGTGA               TTTTTGCGCCTTGTC  71 230
CTM43_RS02720  543808 ..  543839 +  -9.3  -3.72576   AGTAGTCAGCCTGAA      GGTCCGGGGCGGC ATACGA GCTGCCCCTGGTC       TTTACTGACACGAGA  74 36
        mreC NONE
        mreD  545350 ..  545363 +  -2.4  -3.06708   TTGCAGTGCAATAAG               GTTG ATATGA CAAC                TCTGTATCTCGCTTC  42 27
CTM43_RS02735 NONE
CTM43_RS02740 NONE
CTM43_RS02745  551268 ..  551285 +  -4.1  -2.85257   TTGCCAGGAATTGCC             GCAATCT CAAT AGATAGC              CTTCTGTATTTCCGC  45 49
        tldD  553187 ..  553203 +  -6.5  -4.09108   TCCAGCCAGGCATGT              CCGGC AAGGTCG GCCGG              TTTCTCTGGATTGCC  66 434
CTM43_RS02760 NONE
        aaeA  554996 ..  555009 +  -2.3  -3.96298   TCCAGAAACTGGCTA               TGCGC CTGC GCGAA                TTTGGTTAATCGCTA  52 3
        aaeB  557000 ..  557017 + -12.7  -5.65177   CAGCTAACCCATAAA             CCGACGC CCAG GCGTCGG              TTTTTTTATCGCTAT 100 34
CTM43_RS02775  557819 ..  557848 +  -6.5  -5.45652   GCGGGCTTCAATAAT       GCGGTAAGAAGAAG CCC CTTCTTCCTGC-GC       TTTTTTGTTCAGCAT  95 498
CTM43_RS02795  560243 ..  560262 + -13.6  -5.18726   CGCCCTAACAGAAGA            GCCGGAAC CGCT GTTCCGGC             TTTTTATTGTCCAGC 100 44
        zapE  564773 ..  564824 +  -9.4  -2.78596   GCCCTGACAGGTGAC TTTTTCAGGC-GGATTCAGGGCCGC AAG GCCGCCCCGGGCGCGGCCTGAAAAA TCTCATAAAGGGGTC  65 34
CTM43_RS02820 NONE
CTM43_RS02825  565903 ..  565916 +  -9.5  -5.64274   CAATTTGCGAAAAAA               CCCGC TTCG GCGGG                TTTTTTTATGGATAA 100 62
CTM43_RS02835 NONE
CTM43_RS02840  567328 ..  567345 + -12.7  -5.76633   AAATCCCTTCTCTGA             CAGGCCC TGCG GGGCCTG              TTTTTTTGTCTGTCC 100 39
CTM43_RS02845  568148 ..  568171 +  -9.6  -4.42386   ATGAGCAATAAAAAA          GCCCGATG ACGTTAAC CATCGGGC           TTTTATGCGTGAGGC  85 30
CTM43_RS02860  575695 ..  575741 + -16.6    -2.954   CCAGGCTGAGTGAGA AGTACGAGCGTGATGTCCGGAA CAA TGCCGGACATCGCGCTCCTGCC ATTTATGCCTGGCTG 100 28
        uxuA  579588 ..  579603 +    -4  -3.79678   CAACTTACAGCGCAT              TGCTCA GAAT TGAGTA               TTATTGTGCGGAGTT  57 123
        arcB  582002 ..  582040 +  -4.8  -3.98075   ACCGGGGTGCGCGAA TACTGCGC-CAAC-ACCAG GGAA CTGGTGGTTGAGC-CAGTG  TTGTTTGAGTGATGT  62 51
        elbB  582856 ..  582887 +  -7.1  -3.03771   GCGTGCTGGCGCTGA      GCGCATGAGGCTC CGCGTT GCGCCCCTTGCGC       TATTAAAACGTCTGG  59 18
CTM43_RS02890  583863 ..  583886 +  -5.8  -3.79909   TCGAACAGCTTCATC          GCCGGGCGGG CGTG CATGCCCAGC           TTATTGGTGATTTCA  61 303
        mlaF  592565 ..  592575 +  -5.4  -2.87501   TTAGGCATAGGGAGT                 TGAG CGA CTCA                 TGCTGTTTAATGCGC  49 23
        mlaE NONE
        mlaD NONE
        mlaC NONE
        mlaB  594894 ..  594918 +  -9.2  -5.04356   GAAGCTATTCCGAAA          GCCCTGGCAA TCTTT TCGCCGGGGC          TTTTTGCTTGTTTAA 100 65
CTM43_RS02980  595248 ..  595271 +  -6.6  -3.02973   ACTCAATGGCTTCTA          AGCTGTGGGG GATC CCCTGCAGCG           TATGTGAATTTTTAA  55 25
        murA  596563 ..  596616 +  -8.2  -2.61374   TGAAGGGCGAGTAAC CGCG--TCCT-GACAGCGCCCCGGGAC GTT GTTCCGGGGCGCTGTCGAGCAATCACA TCACTTGTCGATCTT  61 27
        rplU NONE
        rpmA  598938 ..  598959 + -15.9  -4.76892   CGGTAACGGATGAAA           GCCCCGCAA CACG TTGCGGGGC            TTTTTACATTCGTCT 100 54
CTM43_RS03010 NONE
CTM43_RS03015  601181 ..  601211 +   -17  -4.59414   TGACTTCTCTGGATC       AAAAAGGGCCGCAT CTG ATGCGGCCCTTTTG       TTTTAATTGTTCTGG 100 44
        greA  603407 ..  603421 + -12.8  -4.38712   TAAAGAAAGGAAAAA               GGCCGC ATA GCGGCC               TTTTATCAACGTCAG 100 73
        rlmE  604613 ..  604627 +  -2.8  -3.40899   TAGAGTATCCTGACG               CTGTTT TTA ACACAG               TTGTAATAAGAGGTT  47 80
        ftsH  606626 ..  606646 + -10.4  -5.75538   TGTTTAACCTTAAAA           CCCCGG-GC GTCC GCTCCGGGG            TTTTTCTTTTTTAAC 100 59
CTM43_RS03045 NONE
CTM43_RS03050  608889 ..  608904 + -11.8  -5.31275   CTAAGTGGTTAAAAA              GGCGGC GCTT GCCGCC               TTTTTTATGATCGAA 100 50
        secG NONE
CTM43_RS03060  609526 ..  609558 + -11.6  -4.83615   TCGGTACCAATATTC     CAGAAAAAAGACGCT GAAA AGCGTCTTTTTT-TG      TTTTTGTCCCCGCTG 100 32
CTM43_RS03065  610536 ..  610568 +  -4.7  -3.36175   TTCCCCGGCGCCAAA      GCTGGCGGACAGATT GGT AAACTCGGCGCCAGC      TTCTCCATGCAGGTT  51 496
CTM43_RS03085  613654 ..  613669 + -10.4  -5.60689   TTCAGTTATCTAAAG              CCCCGA TTTA TCGGGG               TTTTTTGTTATCTGA 100 153
CTM43_RS03090  614162 ..  614180 +    -3  -3.07487   TGAGTAACATCCAGA             AGGCGAAC CTG GTTCCCCA             CTTTTAACAGTCTGG  43 0
        nusA NONE
CTM43_RS03100  618476 ..  618490 +  -9.2  -5.61913   CAATCATTTTAAAAA               GGGGCT TTT GGCCCC               TTTTTTGTCTTTATT 100 84
        rbfA NONE
        truB  619957 ..  619983 +  -2.3  -4.88786   CGGGCGTTGCATCAG        GGGTCGCTGA ATTAGAGA TCGGC-ACCC         TTTCTTTCTTTTAAT  70 117
CTM43_RS03115  620304 ..  620319 + -11.8  -5.00616   CGAGTTTCAGAAAAA              GGGGCC TGAC GGCCCC               TTTTTTCGACCGGGC 100 46
         pnp  622672 ..  622695 + -13.8  -4.07568   AGTAAGGTTGCCGTT          AGCCCTCCGC TTTT GCGGAGGGCG           TTTTACGGGCAGGAC 100 36
        nlpI  623687 ..  623712 +  -7.5  -4.04023   CCATAGTTTTTTGCT         TGCCATCACCT TTGC GGGTGAGGGCG          TTGTTGTTCGTTAAT  71 58
        yrbN NONE
CTM43_RS03140  625799 ..  625821 +   -12  -5.83226   AAACTAAATAATACA           GCCCCGATCG TCA TGATTGGGGC           TTTTTTTATTCCCTT 100 61
CTM43_RS03145  627155 ..  627190 +  -7.4  -3.09273   GGTTTATCAGTAAAG    CTATTGCCCGGTGG-CG CGA CGTCCACCGGGCTGACG    TGTGTGTTACCCCAA  59 28
CTM43_RS03165 NONE
CTM43_RS03170  631621 ..  631639 +  -4.5  -4.10161   GCAGGTCGCCTTTGC             CGCGCAA CGCCT TTGCGCC             TTTTCCCGCCTGATG  64 176
CTM43_RS03180  632330 ..  632340 +  -8.2  -4.62069   CCTGGTCGTAAAACT                 CGCC CCC GGCG                 TTTTTCACATCCACC  83 115
CTM43_RS03190  633526 ..  633540 +    -7  -2.74371   ATAGCGGTTTGCAAA               CGCAGG CTT CCGGCG               TAGTATTCACGGCTT  56 37
CTM43_RS03195  634705 ..  634750 +  -5.9  -4.53602   GCACACAACGTACAG GGGGCGGTAGCCCGGCTAAGCG CAG CGCC-AGCCGGGAAACTGCAGC TTTATTTAATGTAGG  75 100
CTM43_RS03220  639721 ..  639744 +  -3.8  -4.83615   AGTCATACCAGCGGT          TGGCCAGCTCG GTA CGGG-TCGCCA          TTTTTATCACCGGTA  75 414
CTM43_RS03230  641492 ..  641507 +  -2.6   -3.4285   TGTGCCCGAGGAATG              TCTAAA TGAT TTTGGA               TTCTACATTAGATGA  47 81
CTM43_RS03235 NONE
CTM43_RS03240 NONE
CTM43_RS03245  644549 ..  644565 + -10.8  -3.34062   ACTCGCTAACAAGAA              GGGCGC CCTGC GCGCCC              TGTTATGCTTGCCTT  78 32
        garK NONE
        rnpB  646173 ..  646202 + -18.7  -3.05844   AGTTTCACCTTTTAC       GCAAAAGCCCCGC TCCG GCGGGGTTTTTGC        TATTCGAATAGCGGA 100 31
CTM43_RS03260  646649 ..  646668 +  -2.9  -3.73982   AGCCAAAATTAAAGG            TAAGACG TTTATC CGTTTTA             TTCTGTTCATCTCGC  52 136
CTM43_RS03270  647895 ..  647909 +  -7.8  -5.69068   TGCACCGGGGCTAAC               GGCGTT GGT GACGCC               TTTTTTCTGTTTTTC 100 226
CTM43_RS03280  649829 ..  649840 +  -5.8  -2.78384   GCAATAGCCACCAGG                CCGA ACGA TCGG                 TGTCATGCAGACGGC  47 192
CTM43_RS03340 NONE
CTM43_RS03345  660639 ..  660663 + -12.2  -5.21683   TCGGGCTCGTAACAG          CGGCGTTTCA GCCAG TGAAGCGCCG          TTTGTTTTTTTCAGT 100 103
CTM43_RS03350  661566 ..  661589 +    -3  -2.70932   TCAGCGTATGCACCG          CCGCCAGCGT CAGC ACGGTGATGG           TGATTGCCGCGCCAG  41 346
CTM43_RS03380  666963 ..  666973 +  -5.4  -3.08813   ACGCTGAGCGGCGAT                 GATC AGC GATC                 TCTCTTCAACTGGAC  51 34
        rlmG  668580 ..  668596 +    -5  -3.82097   CAGCCGGTGGTTTTG              CCGAGC CCTTC GCCCGG              TTTGCTGGCTTTGCG  59 435
        lsrA NONE
        lsrC NONE
CTM43_RS03415 NONE
CTM43_RS03420 NONE
CTM43_RS03425 NONE
CTM43_RS03430  679505 ..  679518 +  -4.5  -3.97307   GGTTTACCGGCGCAG               CCGTT GGCC AGCGG                TTGTTCTTCGATACG  62 508
CTM43_RS03470  691319 ..  691332 +  -8.1  -4.18018   CGCCTTTCTGCGCCG               CCTGC GCCG GCAGG                TTTTGCGTCAGCAGC  74 373
CTM43_RS03485  694274 ..  694284 +  -8.2  -5.26316   CCTTATCCGGGCTAC                 CGGC GGT GCCG                 TTTTTTGTCGGGTGG  95 80
CTM43_RS03520  700969 ..  700988 + -11.4  -5.38054   TTCGCGGTGGCTAAA            CCGCTGGC CCAG GTCAGCGG             TTTTTCTTTCTCCCC 100 41
        dhaR  703428 ..  703455 +  -5.5  -3.86897   GGTCTTTCTCGATGC        GGCTGCCGCCGT ACAGG GCGGTGGT-GCC        TTTATCCCCGGTGCG  61 473
        pduC NONE
        pduD NONE
        pduE NONE
CTM43_RS03565  710419 ..  710436 +  -2.5  -2.51089   GGTCAGGCGAATTAA             ACGGGCG CTCG CGCCAGC              CTCTCTCTTTAACGT  39 26
CTM43_RS03570  711283 ..  711301 + -17.4   -3.5393   ATGAGTAAAGCGGGA             CCCGCCGC AGC GCGGCGGG             TTTCCCCGGCCTGAT 100 33
CTM43_RS03585  713225 ..  713255 +    -3  -2.64803   GGCAGGCGGACTGCC       CGAGCGGAACGGCT AGC GGCCGATCAGGGCG       TCGATTTCGCCATCG  41 104
CTM43_RS03600  717811 ..  717848 +  -7.5  -4.56597   CTAAATGCGCAGTTA   GCGGCCTTCTTCTGCGC AAAG GCTCAGCAGCGGCCCGC    TTTTTGCGACAGGGC  80 71
CTM43_RS03615  719403 ..  719418 + -10.4  -4.57837   GAACGCCATAAAAAA              GCTCCC CGCA GGGAGC               TTTTTAACAGGCTGT 100 74
        tsaD  724851 ..  724869 +   -16  -2.57244   ACGCGTCCTGAAACA             GGCCGACG TCA CGTCGGCC             TGCCTTCCTGACTAC 100 40
CTM43_RS03680  731814 ..  731844 +  -7.5  -4.36595   AAGGCGGCGGATCGG      GTTGCGC-CGCGCC GCCA GCCGCCAGCGCAAC       TTTTGCCTTTCCATG  76 111
CTM43_RS03690  733217 ..  733229 +  -3.3  -3.42503   GCGGATTACGCGCGC                TCTGG CAG CCGGG                TTATGCCTGTTGAAC  48 144
CTM43_RS03695  734120 ..  734154 +  -8.5  -3.24825   TGGTCTTCTTCTAAG    GCCTGCGCCCTCAGCC TTGC GGCTGGGGGCA-ACGC     TGTTCCTTCCACTGC  64 27
CTM43_RS03710 NONE
CTM43_RS03715 NONE
CTM43_RS03720  741955 ..  741982 + -17.8  -5.34309   TGTGGTGAAACATCA        CGGCCTGCGATA GACG TATCGCGGGCCG         TTTTTATTTAATCAT 100 64
        glgS  742346 ..  742363 + -14.1  -5.19212   AAGCCAAACGCAAAA             CGGGCCC CCAG GGGCCCG              TTTTTTACTGCTGCT 100 39
        ribB  743694 ..  743719 + -17.7  -4.09551   TTCGCTATGCCCGAG         CACAGCCCACT TGTT AGTGGGCTGTG          TTGTTTCTGCGCTTT 100 48
CTM43_RS03745  745485 ..  745525 + -16.1  -3.61517   GTTGGCGCCTGATGA  TAGCGCGCTCCGGCGGC ATTTACC GTCGCCGGAGCGCGGCA  TTATTCGACGAAAAT 100 29
CTM43_RS03765 NONE
CTM43_RS03770 NONE
CTM43_RS03775 NONE
        yqiA NONE
        parE  753631 ..  753647 + -13.7  -4.74801   GCGCCAGACGTAAAA              GGGAGCC TCA GGCTCCC              TTTTTCATGGCATTA 100 52
CTM43_RS03810  757342 ..  757352 +  -6.8   -2.8937   GATCGGTCAGGAATC                 GCGA TCC TCGC                 TCTGTCAGAGTATGT  54 62
CTM43_RS03815  758274 ..  758312 + -17.5  -3.21924   GTGGCGGAATCCTCA   GCCGATCTCACGGCCTG TGACT CAGGGCGTGAGATCGGG   TATTATCGCGGGTAG 100 47
        parC  760819 ..  760829 +  -5.4  -3.81926   TTTGGGTTTTAGAGG                 TAGC TAT GCTA                 TTCATTTTTCGAGTA  61 212
CTM43_RS03825  761598 ..  761612 +  -5.7  -5.04601   GCGCGTATTGCTGGC               GGGAA ACGAA TTCCC               TTTTTCATTTGTCAG  85 62
        ftsP  763067 ..  763089 + -12.7  -3.54741   CCGTAATCTCTTTGA           CCCTGGCCG GCGCA CGGTCAGGG           TTTGAGAAAATCCTC  89 35
CTM43_RS03835  765370 ..  765398 +  -8.8  -2.87132   ATCACGCTAAGCGGC       TG-GCCCGGCGGG ATCG CTCGCCGGGAACA        TCTGTGAAAAAAGGA  62 31
CTM43_RS03840  766344 ..  766358 +    -7  -3.76402   CTATCTGATTGATCA               CCGGGG CGA CGCCGG               TTTCATCAATCAGCT  63 420
CTM43_RS03855  769708 ..  769737 +  -2.8  -3.57144   GGCGGCGGTCAGAAT       GGCGATAGTGGGC ACAAA GTCCATGA-CGCC       TTTAGCAATCAGCGC  49 516
CTM43_RS03870 NONE
        exbB NONE
        exbD  772684 ..  772698 +  -4.2   -5.9218   GTTTCTGCAAAGGCT               GGCC GCGTGCA GGCC               TTTTTTTGTTGTCTG 100 50
CTM43_RS03885  773303 ..  773324 + -11.5   -2.7386   ACTGATCCCTTCTCT           CCCGGCGGT GTTA GCCGCTGGG            CTGTTTCTCCCTGTT  75 36
CTM43_RS03895  774870 ..  774892 +  -7.6  -4.87665   CCGGGCGGTTGCCGA           CATCCTGCGC CCA GCGCAGCACG           TTTTTATAGCTCCCG  90 229
CTM43_RS03910 NONE
CTM43_RS03915  779939 ..  779950 +  -4.4  -2.92938   CCCTGTATTTTCCAC                CGTT AATT AACG                 CTTTGGCTTCTTTAA  46 339
CTM43_RS03935  782497 ..  782507 +  -2.4  -3.72576   CGAAATCATGCCGCC                 GGGC AGG GCCA                 TTTGCTGGCGCGCCA  51 290
CTM43_RS03950  787008 ..  787029 + -10.1   -4.3255   ACCATAAGGTGAATA           GGGGACGTG GCAA CGCGTTCCC            TTTATTAATTAACGA  90 40
CTM43_RS03955 NONE
CTM43_RS03960 NONE
CTM43_RS03965 NONE
CTM43_RS03970 NONE
CTM43_RS03975 NONE
CTM43_RS03980 NONE
CTM43_RS03985  795158 ..  795169 +  -5.8  -2.80994   TAGGGCATGCTAGTG                CGGT GCTC ACCG                 TCTCGTGGCCTTGAC  52 0
CTM43_RS03990  795815 ..  795834 +  -7.9  -3.77196   GGTACAAATAAAAAA            GCAGATC CGCTGA GATCTGC             TTTCCTACGTGATCC  68 160
CTM43_RS04000  797474 ..  797490 + -10.9  -2.62616   TCGAACCAAGGACAC              GGGGATT TTC AATCCCC              TGCTCTACCGACTGA  66 59
CTM43_RS04015  798694 ..  798722 +  -6.8  -4.62069   TCAGACCCGGACACA       TCGTTGGGCAAGG TTTC CCTTGCCTGA-GA        TTTTTACACTCCCGA  77 124
CTM43_RS04020  800898 ..  800920 + -14.8  -4.67038   TGAAGGGATAAAAAA           TGCCCCGCTG AAC CGGCGGGGCG           TTTTGCTTTTGACGA 100 30
        trmB NONE
CTM43_RS04050  806066 ..  806087 +  -9.3  -4.66537   GGACTAAGTTTGACA           AGGGTCGGC AATT GCCGGCCCG            TTTTGTCTTAAGGGA 100 34
CTM43_RS04055  806939 ..  806953 +  -4.2  -2.62184   TTACCGCAATCGCCA               GTACCG CGC CGGTAA               TGATATAGCGCAGCG  42 137
CTM43_RS04100  814715 ..  814734 +  -3.7  -3.29312   TGTTGTTTATTAATA            TTATTTG GTAATA CAAATAA             CTTTTGATTATAAAT  48 96
        csgD  815738 ..  815761 +  -3.7  -4.15044   TTCCAGTATGACTAC          GGCAGAGGC TGAATC GACGCTGCC           TTTATTCAGCGCCCG  62 117
CTM43_RS04150  823586 ..  823602 + -10.9  -4.52703   AACTGAACAAGGGCG              CTCTTGC CTG GCAAGAG              TTTTCTCGTGGTTTC 100 238
CTM43_RS04155 NONE
CTM43_RS04160  825926 ..  825958 + -12.7  -5.73339   GATTTATCTATCAAA      CCCTTCCTCGTCG GGCCTAA CGACGCGGAGGGG      TTTTTTTATACTTAT 100 174
        speB  826941 ..  826966 + -16.9  -3.14132   GAATAACCCCGGTAA         CCCCCTGTGCC GTAC GGTACAGGGGG          TTAATCAAGGCGCAG 100 35
         tkt  830485 ..  830516 + -14.6  -4.52589   GAGAGGGTGCAAACA      CCAAAACGGTAACC CCTG GGTTACCGTTTTGC       TTTTATCTCGCCACC 100 90
CTM43_RS04185 NONE
CTM43_RS04190  833044 ..  833063 +   -15  -4.57341   AGCAGTAATTCAGTT            CAGGCGGG GAAA CCCGCCTG             TTTTTCAGCGCGCTT 100 33
CTM43_RS04195  834238 ..  834255 + -12.7  -5.64304   GTTTCTTACCCGGAA             GCCCGCA GCAA TGCGGGC              TTTTTTATTATCTTA 100 50
        mscS  835281 ..  835297 + -15.1  -4.67353   CCTCTCAATAACTTA              GGCCGGC CAT GCCGGCC              TTTTTCAATAGCTCA 100 45
        argO  836054 ..  836064 +  -6.8  -3.81951   GCTTAACTAAGCGTT                 GTCC GAT GGAC                 TTTCCTGCTGTACGC  66 31
CTM43_RS04210  836923 ..  836941 + -13.2  -5.24129   GATAGAAACAAAAAA             GCCACTTC GCT GAAGTGGC             TTTTTTATGCCCGCA 100 43
CTM43_RS04220  838682 ..  838716 +  -5.7  -5.15634   CATCGTAAAATAGTC    TGTCCGC-AGGGAGCC GACC GGCTCCCTCGCAAATA     TTTTTTCATCAGGTG  85 28
CTM43_RS04225  840196 ..  840218 + -14.9  -5.84381   ATCATTTTTGCCTCT           CGGGCAGGT CGCGT ACCTGCCCG           TTTTTTTGTTAATAC 100 40
CTM43_RS04245 NONE
CTM43_RS04250 NONE
CTM43_RS04255 NONE
CTM43_RS04260  846007 ..  846024 +  -9.8  -4.13304   GTCACACTTCTTTCA             CCCGGC CTGGGC GCCGGG              TTTTCCCCCTCATTT  81 45
        gcvT  847480 ..  847500 + -11.9  -3.04715   AAACCTGGTTTTGTA            CGCAATGGC AAA GCCATTGTG            TGATTTCCCTTTTTT  78 2
CTM43_RS04270  848023 ..  848038 +  -5.4  -3.21593   GCCGCCTTCCTGCAA              CGCGAA TGAT TTTGCG               TATTCTGGCCCGGTA  52 131
CTM43_RS04275  851020 ..  851041 + -13.1  -5.40072   TTTTAGCTAAACTTT           TAAAGGCGC TGCG GCGCCTTTA            TTTTTTTGGAGGGAA 100 48
CTM43_RS04280  852163 ..  852195 + -20.6  -2.62184   CCGTCAGCACATTGC      CGCCGTCGGCGGCA AGCGA TGCCACCGACGGCG      TGGTATAGCGACAAA 100 385
CTM43_RS04315  858237 ..  858267 +    -2  -3.25472   GGGAACAGCTGTGAG       TTGAAATAAAAATG TAA CTTTTTGATTTTAA       TGTATTTACAAATAT  43 48
CTM43_RS04320  859273 ..  859304 +  -9.5  -3.31248   CGTCATCCAGCTGTA     C-GGCTGCCAGCACCG TAC CGGTGC-GGC-GCCAG     TTGTCGCCCATCTTC  66 261
        sdhE NONE
CTM43_RS04335  861219 ..  861229 +  -6.8  -2.64218   ACAAACTTCACGCCC                 CTGG TCG CCAG                 CTTGTCATGCAGCAT  50 222
        xerD NONE
        dsbC NONE
        recJ  865040 ..  865066 +  -3.7  -3.30903   ACAGTGTAGGAATAA        GGGCGCGAATCC GGTA GAATTC-CGCTC         TTATCACCGCATTTT  48 43
        prfB NONE
        lysS  867758 ..  867771 +  -9.5  -6.06529   GCGAAGAGCAAAAAA               CCCGG CTTG CCGGG                TTTTTTTTATGTCTG 100 50
CTM43_RS04375  869566 ..  869586 +  -4.5  -3.29511   AAAGGTTATTTTATC            GCCAGTCAG CAT CCGGCAGGC            TTGTCACAGGGTGCG  52 40
CTM43_RS04380  869724 ..  869744 +  -3.4  -4.57341   TCTCTCTTGTGGTCA           CA-CATCTT TGAT AAGATGCTG            TTTTTGAAACAAGTT  66 43
CTM43_RS04395  872760 ..  872775 +  -8.2  -5.60689   CCTTGTCTCAATTGA              CCTCGC TACG GCGGGG               TTTTTTATTGTCTAA 100 54
CTM43_RS04400  873811 ..  873827 +  -9.5  -3.14132   TAAGATCAAATACCA              TAGGGAA TCA TTCCCTA              TTAATAAGAACAAGA  70 200
CTM43_RS04405 NONE
CTM43_RS04410 NONE
CTM43_RS04415 NONE
CTM43_RS04420  876313 ..  876336 +  -9.5  -3.09516   GCATAAACAAATCAA          CGGCGTCCG AAAATC CGGACGGCG           TTAAATAATAGAACA  69 35
CTM43_RS04425 NONE
CTM43_RS04430  877045 ..  877079 +  -4.2  -2.60615   GATATAAATATTAAA     ACCTCTCAGAATGC GATACAG GCGCTCTGGGAGGC     ATATTTGAACACAAT  44 39
CTM43_RS04435  877662 ..  877681 +  -6.4  -4.96996   CTTCTTATGTTTTAA            GGCCAC TACTTTCT GTGGCC             TTTCTTTTATTTCAA  83 322
CTM43_RS04440  877929 ..  877942 +  -2.3  -2.78712   ATTAAAAATAAAGGG               GTTCC TAAT GGCAC                TAATTAAATTCCCAC  40 5
CTM43_RS04445 NONE
CTM43_RS04450  879691 ..  879715 +  -6.4   -5.4505   AATAAATCATACAAA         GCCTC-GCCCT TTAC GGGGTTGAGGC          TTTTTTATTAGGAGA  93 348
CTM43_RS04455  881547 ..  881561 + -11.4  -4.84918   TTTAGGGGAATGAAA               GGGGCT TAA AGCCCC               TTTTCTATTTCTGGA 100 28
CTM43_RS04465 NONE
CTM43_RS04470  885434 ..  885446 +  -7.7  -2.71001   GGCGCAGTTAGCACC                GCTGA CAA TCAGC                ATTCCTTTAACCGTA  58 221
CTM43_RS04475  886791 ..  886805 +  -2.8  -2.88544   TGTCGCTAGCATATC               TTCTCA AAA TGAGGG               TCTGTAACCATGAAG  42 4
CTM43_RS04480 NONE
CTM43_RS04485 NONE
CTM43_RS04490  888819 ..  888840 +  -8.7  -4.26003   GACTAACCCTATGAA           CCCTTGGAG GAGA CTCTGAGGG            TTTATTAACTGTTAT  77 35
CTM43_RS04500  892071 ..  892095 +  -3.6  -4.67556   CGTTATACCAGCGTA          TTTAACTGTC CAGAA GGCAGATAAA          TTTTTCCAGTGTTAT  69 238
CTM43_RS04515  895944 ..  895958 +  -7.2  -3.83502   TAGCTGTAACGAGCT               TAACAG CAG CTGTTA               TTTAATGTAAGCATA  69 328
CTM43_RS04535  903021 ..  903033 +  -4.8  -3.08679   TATTGTGCCCTTGGT                GCGA CGGTT TCGC                TGTTGAATAGCAAGG  49 7
CTM43_RS04540  903216 ..  903232 +    -3  -2.78216   CAAATGCCGGTAATT              CAATTG AATGG CGATTG              TCGTTAATGAAAATG  42 2
CTM43_RS04545  904790 ..  904816 +    -6  -2.69799   CTATTATTACGCTGT         GCTGATTTTG ACCTTCA TAAAATCAGC         TGGTCTGTCGGCTGC  51 245
        hdeA  905341 ..  905366 + -15.5  -5.42259   TAATGTTAGGAGTAG         CAGAGCCGCGT TATA ACGTGGCTCTG          TTTTTTTGCGACTAA 100 75
        evgA  925313 ..  925324 +  -7.2  -2.75498   GCTTGCTTCCTCTGA                CCGC GATC GCGG                 GTTCTATATCGACTA  57 193
CTM43_RS04650  927092 ..  927116 +  -8.6  -3.37796   AACAGGAGAAAAAGT          CAGTTCGACT TAACC AGTCGATCTG          TTATGAGTCATGGGC  66 89
CTM43_RS04700  935958 ..  935980 +  -6.2  -3.20991   TTAGCGTCAGTACGC           TGCCGATGGC CGG GGCATCGTCA           TTGAATTCAATTCCC  54 307
CTM43_RS04715  937122 ..  937132 +  -2.6  -3.08934   GGGCCGGGTTGCCGG                 TAAA AAA TTTA                 TCTTAACATATATGA  43 23
CTM43_RS04720 NONE
        arsC  938911 ..  938937 + -10.9  -2.50492   AATAGCGCGCAGAAT        GGC--GCCGGCTG TAG CAGCCGGCATGCC        GTGTTAATCCTCCTG  72 36
CTM43_RS04730  940936 ..  940961 + -18.3  -5.26316   GCCTGACGCAAGCCT         CAGGCCGGCCC GGTG GGGCCGGCTTG          TTTTTTGTCCAATCC 100 35
CTM43_RS04735  941444 ..  941466 + -13.5   -5.1356   GCCTCTTCAGCTTAA           TGCCTTCCC CTATT GGGAAGGCA           TTTTTGTTACTGCCC 100 59
CTM43_RS04760 NONE
CTM43_RS04765  946899 ..  946921 +  -9.9   -4.3739   CGCGCATGACGTACC          G-GCACCGGT GCTA ACCGGTGCGC           TTTTCTCGCACCCTC  85 32
CTM43_RS04825  959438 ..  959454 +  -9.4  -2.91395   CTCCGGATTGGGCAG              GCGGGT AATAA ACCCGC              GTTTCTCCAGCGCCT  62 211
CTM43_RS04835  960909 ..  960923 +  -8.6   -4.3208   AAGCGCCTTGTTCTT               TCGCAA TGG TTGCGA               TTTTCGCTTCTGCGC  81 201
CTM43_RS04845  962371 ..  962389 + -12.4  -3.15861   CGTCAGAAAATAAAA             CTGCCCCG CGA TGGGGCAG             TTAATAACAATAATA  82 44
CTM43_RS04850 NONE
CTM43_RS04855 NONE
CTM43_RS04860 NONE
CTM43_RS04865  967296 ..  967311 + -11.8  -5.47218   AAGTGACGTTAAAAA              GCCGGG AATT CCCGGC               TTTTTTTACATGGCA 100 39
CTM43_RS04900  973655 ..  973668 +  -2.4  -5.41746   AATAGCTATTTCTTT               GTGA TTGGCT TCAC                TTTTTTTAAACAATT  79 43
CTM43_RS04905  974955 ..  974972 + -12.7  -5.24531   TACCTCGATTTCCAT             GGCCTCC TGCG GGAGGCC              TTTTTTATGCGCCGT 100 46
CTM43_RS04910  975907 ..  975927 + -11.1  -5.60993   CTCATCGTTTGTTTT            CCCCGGC GCCGTCA GCCGGGG            TTTTTTTATGGGGGA 100 55
        kduD  978547 ..  978562 +  -5.4   -3.7347   GGTATAATGTTACCG              CTCTGT ATAA ACAGGG               TTATTAACTATTGGA  59 137
CTM43_RS04925  980224 ..  980243 +  -4.8  -2.82516   GCCGTGAATGATATG            CAGGGCGC TCAG GCGCCCGA             TGTCATAATGCGGCA  44 97
CTM43_RS04935 NONE
CTM43_RS04940  984099 ..  984132 +  -9.7  -3.08464   TAAGGCTGTTGTCGT     TAATAACCCGTCTTT GACG ATGGGCGGGTTATTA      TTGCCTGCATCGTCG  69 44
CTM43_RS04945  985930 ..  985944 +  -2.7  -4.78764   AAGTTAATCACTTTC               GCCGC CGCCT GCGGG               TTTTTCGTCGATTTG  70 410
CTM43_RS04975  991803 ..  991852 + -11.5  -3.34895   TGAAAATCGGCGGGG GTCAGCGTCGCCTGCGCCGCCAGC GGATG GCCGGCGG-GCAG-C-ACGCAGAC TTCATTCAGCGTCAG  73 364
CTM43_RS04985  994035 ..  994050 +    -6  -3.96148   CGTTACAGGAAAACA              GCGCGC TGAA GCGGGC               TTTCTCGTCCAGCAG  66 305
CTM43_RS04995 NONE
CTM43_RS05000  997819 ..  997831 +  -3.3   -3.4582   GATGATGAATACCGC                TAGCC GGG GGCAA                TATTTGCTAAGATAG  50 23
CTM43_RS05005 NONE
CTM43_RS05010  999408 ..  999451 +  -6.5  -3.73775   GACGGCGCTAAAGTG GCGGCCGCGGCCAAGCAGT TCGGTC ATCGCCTGTTCGCCGCCGC TTTCATCCGGCTCGG  61 295
CTM43_RS05020 NONE
CTM43_RS05025 NONE
CTM43_RS05030 NONE
        lplT 1004143 .. 1004174 + -15.9  -3.11962   ATCTGCTCTTCAGTA      GCCCGGGTAAGGC GTATAA GCCTTACCCGGGG       CTTTGCTTTCTTACG 100 86
CTM43_RS05065 NONE
        ptsP 1010858 .. 1010870 +  -4.7  -3.45768   TCTTTTACACGTTCG                GCGCG GAT CGCTC                TTGTGGCTTATGCTA  55 151
CTM43_RS05075 NONE
CTM43_RS05080 1012676 .. 1012695 + -16.4  -5.63504   TGCTGATATGACCAA            CCGGCGCC CGAT GGCGCCGG             TTTTTTTATGCCCTT 100 47
CTM43_RS05085 NONE
CTM43_RS05090 NONE
CTM43_RS05095 NONE
CTM43_RS05100 NONE
CTM43_RS05105 NONE
CTM43_RS05110 NONE
CTM43_RS05115 1024569 .. 1024587 +  -7.4  -2.72144   TTTTGCCGGAGAAAC             TCAGGAGG AGG CCTCATGA             CTTTCGAACAACTAC  56 7
CTM43_RS05120 1026665 .. 1026704 +  -4.3  -2.57132   ATAATATCGCGATGG CGGCGCCGAGCG-CGGCAT AGCC ATGCTGATGAT-GGCGCTG  GTTATCCCAGAGGAG  42 262
CTM43_RS05135 NONE
CTM43_RS05140 1031218 .. 1031243 +  -9.7  -3.05997   CTTCGCCCAGCAGCT         GCGGG-CTGCCG CAG TGGCAGGCCTGC         TGTACTTTCTCCCAC  64 301
CTM43_RS05250 1049117 .. 1049136 +  -9.3  -4.95547   CGAACCGCTCAAAAA            GTCTCCC CGGGTT GGGAGAC             TTTTGTTATTGTCAA 100 98
CTM43_RS05255 1050503 .. 1050516 +  -8.1  -2.82516   GGGTGTAAATCCCCC               GCAGC CCCC GCTGC                TGTGATGCTGACGAC  59 369
CTM43_RS05260 NONE
CTM43_RS05265 NONE
CTM43_RS05270 NONE
CTM43_RS05275 1054804 .. 1054819 +  -4.6  -3.04792   TCCCCTGGAGACGAT              TGCCCG GGAG CTGGCA               TGTTGACGGTCGTGG  49 4
CTM43_RS05280 NONE
CTM43_RS05285 NONE
CTM43_RS05290 NONE
        cbiG NONE
CTM43_RS05300 1058497 .. 1058525 +  -8.2  -2.82623   TGATCACCCCGCGAG       GCTACG-CGCTGTG AAT CACGGCGACGT-GC       TGGTTATCGGGGGCA  62 12
CTM43_RS05305 NONE
CTM43_RS05310 NONE
CTM43_RS05315 NONE
        cbiM NONE
CTM43_RS05325 NONE
CTM43_RS05330 NONE
CTM43_RS05335 NONE
CTM43_RS05340 NONE
CTM43_RS05345 1065406 .. 1065416 +  -6.8  -2.75022   GGCTGACCGGGCCAG                 CCCT GGC AGGG                 ATTCTGTATGCAAAA  54 51
        cobT 1066850 .. 1066864 +  -7.8  -5.40474   AATTGGCTTATAAAA               CGCCAC GTT GTGGTG               TTTTTTTACACAAAT  95 396
CTM43_RS05365 1068089 .. 1068139 +  -9.8  -4.78839   CCTGGCCGTGCCTGT TGACCAGGGCGCCCGGATGACGCCG CTTG CGGCGGTCTCCGGGCG-C-TG-TCA TTTTGTTCTGAGGTT 100 45
        tcdA 1069134 .. 1069157 + -12.4   -4.8622   ACAGCGCCAGCGGAT          CCTGCGCCAGG ATC CC-GGCGCGGG          TTTTTCCTTCCACGG 100 181
CTM43_RS05385 1071102 .. 1071120 + -12.4  -2.55213   AAAAGGCAAAAAAAA             GCACCGCG CGT TGCGGTGC             TACATTAAATCACTA  78 48
        gcvA NONE
CTM43_RS05395 NONE
        rlmM 1074224 .. 1074248 +  -7.8  -3.13522   ATCTGGTCGCGTTTG          GCCAGCTCCT GGCAG ATGGGCTGGC          TGTTGGTAAAGACGT  57 393
        fucA NONE
CTM43_RS05435 1082352 .. 1082393 +  -4.4   -4.1899   CCAGGCGGGCGTACA GC-CCCTCCAGGTCCTGAA ACTCG TTCAGCAGCTGGGCGGCGC TTTTGGGTCCAATGC  64 245
        ssuD NONE
CTM43_RS05455 NONE
CTM43_RS05460 NONE
CTM43_RS05465 NONE
CTM43_RS05470 NONE
CTM43_RS05475 1092001 .. 1092020 +  -7.8   -5.1244   ATTTATTTCCCTTGA            GGATGCGT GAAA GCGCGTCC             TTTTTGTGTTGGTGA  91 71
CTM43_RS05485 NONE
CTM43_RS05490 1094901 .. 1094942 +  -5.9  -3.44146   GTCGACTTTCACCGG CAGCAGGCCGATGCGCGTA AAGGTA TCCGC-CAGC-GCCTGCTG TTCGTTATACACCGC  53 122
CTM43_RS05520 1102122 .. 1102160 +  -7.8  -3.62864   CTGCCAGATCGTTTG  TGA-GA-GATCTCTTACA AAACC TGTAAGAGATCGTCATCA  TTTAAGGTAAATTTA  68 47
CTM43_RS05525 NONE
        truC NONE
CTM43_RS05535 1104510 .. 1104524 + -11.4  -4.56914   GCTGCGCTATGCGGC               GCCAGC GGC GCTGGC               TTTTCATTTCCGTGA 100 232
CTM43_RS05540 NONE
CTM43_RS05545 NONE
        gudD NONE
CTM43_RS05555 1110164 .. 1110195 + -10.8  -2.71924   GACCGTAGGGCGTAG      GCCGGAT-GAGGCGC GTA GCGCCGCTATCCGGG      GTTTACACCCCCATC  72 149
        rlmD 1114444 .. 1114469 +  -6.7  -2.52464   GACATGTAGAAAGTT         GAGGCTTGCCG ACTT CGGCAGGCCGG          TCCCTTAAGGAGAGG  52 103
CTM43_RS05575 1116705 .. 1116720 + -10.4  -2.66235   GATGTGATCGACGCG              CGCCGT CTGC ACGGCG               GTTAATTCGTCTGTA  69 5
CTM43_RS05580 1117636 .. 1117651 +  -2.5  -4.21701   ATCTCTAACGGATTT              TCGTG ATCAAG CGCGA               TTTGTGTGATTTTAT  57 33
CTM43_RS05585 1119562 .. 1119585 + -15.4  -4.08164   AAAGAGTTTGAACGG          CAATGCACCC ATCC GGGTGCATTG           TTTGTCTGGAGTTTT 100 41
CTM43_RS05590 1120949 .. 1120968 + -13.6  -6.07627   CTTGTGAAATAATCA            TGCCAGCC TTCG GGCTGGCA             TTTTTTTTTACGCCT 100 48
        queE 1123254 .. 1123276 + -11.3  -4.92314   TTGCCTGATAAAAAA          GCCCGG-CAG CGTA CTGACCGGGC           TTTTTATCGCTTACT 100 33
CTM43_RS05610 NONE
        cysI NONE
        cysH 1128349 .. 1128374 + -10.4   -4.4727   GTGATAATTCAAAAA         GAACACGCGG GCGATA CCGCGCGTTC          TTTTGTGCGTATTAG  90 61
        cobA NONE
CTM43_RS05635 NONE
        cysN NONE
        cysC NONE
CTM43_RS05650 1134501 .. 1134527 + -12.2  -4.15833   ACGCGGCATCGTCCG         CGCGCCCCGGTA GCG TACCCGGGCGAG         TTTTGGGATGATGAT  95 104
        ftsB NONE
CTM43_RS05660 NONE
CTM43_RS05665 NONE
        truD NONE
        surE NONE
CTM43_RS05680 1138500 .. 1138515 +  -4.6  -5.81412   GGAGCTGGCCTGAGA              CCCGGA TTAT TCCAGG               TTTTTTTTGCCTGAC 100 28
        nlpD 1139799 .. 1139855 + -12.1  -3.14013   GCATCAGCTAACAGG CGCCAGGGCGGTGTCTACGTTCCTCTC GCA GAGAGGGCAGGGGAAATCGTCCAGGCG TCGTTTGTTGATGTG  82 65
        rpoS 1140928 .. 1140949 +  -7.1  -5.28942   GTTTTCTGTCAAAAA           GGCCCCCTC GAAA GTCGGGGCC            TTTTTCTTTGGGCTA  91 44
CTM43_RS05705 1143986 .. 1143999 +  -2.3  -4.89393   GTCACCTCTATGATA               GCCGT TCGT ACGCC                TTTTTATACCCTTTC  70 477
CTM43_RS05715 NONE
CTM43_RS05720 NONE
CTM43_RS05725 1146399 .. 1146416 +  -9.8   -5.5762   AGCGTTAATGAAAGG             GGCCCG CTAAGT CGGGCC              TTTTTTATATTTAGT 100 33
CTM43_RS05735 1146958 .. 1146981 + -18.2  -4.67904   TTTTGTTTACTAAAA          CGGCAGCGCT TCAC AGCGCTGCCG           TTTTTCACCTTAATG 100 101
CTM43_RS05745 1151624 .. 1151642 +  -4.4  -4.62904   TGGTGCCGAAAATCA             CGGGCAGA CGT TCAGCCCC             TTTTTCCAGCTGTTT  72 524
CTM43_RS05835 1172522 .. 1172538 +  -6.5  -3.90744   TGGTGCCGCCCGCGA              CGGCG CCCCACC CGCCG              TTATTTCCGACCACG  64 298
CTM43_RS05850 NONE
CTM43_RS05855 1176870 .. 1176887 +  -8.3  -3.05463   GTCCGCCGCGCAGGC             CGCTGGC TTTA GCCTGCG              TTGGATCGAAGGCGT  57 439
CTM43_RS05905 1185613 .. 1185630 +  -6.9  -3.97401   CTCCTTCCGCTCCAC             TGCCGGC TCCC GGCGGCA              TTCTTGTAATTTTAT  68 91
CTM43_RS05915 1187127 .. 1187140 +  -4.5  -2.57132   GTTAACTTCGGCGTA               CAGGC CGAG GTCTG                GTTCTAAGGAGAGAC  46 5
CTM43_RS05920 1189361 .. 1189383 + -16.3  -5.40072   TGAGTAGTACGTTCA           GGCTGCGCC AGACG GGCGCAGCC           TTTTTTTCGAAGGAG 100 34
CTM43_RS05925 1191111 .. 1191122 +  -4.4  -4.11216   GTGAGCAATACCGCC                CGTT CGAT AACG                 TTTTCCAGCTCGCGC  64 332
        hycA 1197487 .. 1197498 +  -4.4  -3.53224   GCGCAACCTGATTTC                GTCA AAAA TGAC                 TTTCACCCGAGGATG  52 76
CTM43_RS05970 NONE
CTM43_RS05975 NONE
        hycD 1200855 .. 1200873 +  -3.7   -2.7186   CGCCTTTTTAGCTTT             CGTCTCC TTGCT GGTGGCG             TGATTAAGAGAGTTT  42 4
CTM43_RS05985 NONE
CTM43_RS05990 NONE
        nuoB NONE
        hycH NONE
        hycI 1204987 .. 1204999 +  -6.2  -4.15833   TGGCGGGTGTAGCGC                CGCG TCTCC CGCG                TTTTGCGGTCCTCAT  69 221
CTM43_RS06025 1209582 .. 1209600 +  -5.3  -2.57931   CTTCTTACTGCTGGA             GAAATGG ATGAA CCGTTTC             ATTATCGCCGATGCG  48 155
        hydN NONE
        hypF NONE
CTM43_RS06040 1213396 .. 1213440 + -13.8  -3.53012   TCCCGGCTTGCGCTG CG-CTTAGCCGGGCTAC CAGGACAATACC GTAGCCCGGCTAAGGCG TTTACGCCGCAAGCC  91 52
CTM43_RS06060 1217816 .. 1217830 +  -3.4  -4.82128   CGTTCTCATCCACTA               CCGGCG CGG CGCTGA               TTTTGTGTTTCATCA  73 59
CTM43_RS06100 1224234 .. 1224272 +  -8.2  -5.07567   GTAAGCGCAGCGCGA  CCGGGGGATGACGC-CGG GGAGG CCGCGC-TTATCCCCCCG  TTTTTTCCCGTCTCC  93 135
CTM43_RS06105 1224480 .. 1224496 +  -2.1  -2.73364   GGTTAGCAACCTGGT              GGGCGGT GAC GCTGCCA              TGATTGAACTGGAGC  39 6
CTM43_RS06110 NONE
CTM43_RS06115 NONE
CTM43_RS06120 1226929 .. 1226958 +  -8.7  -3.91897   AAGTAACAGGTTGTC       T-GGTCGTCCTG GTTATCA CAGGACGACCCA       TTTCTGGATCCCCCC  73 35
CTM43_RS06125 1227557 .. 1227576 +    -8  -2.75382   CTACAAAACACTTGA            TACTGTAT GACC ATACAGTA             TAATTGCCTCAACTG  59 26
CTM43_RS06130 1228726 .. 1228743 + -12.7  -4.61873   TCTGCAAGACTGACA             GGGCTGC TTAG GCAGCCC              TTTTGCTTTGTGAGA 100 46
        recX 1229328 .. 1229373 +  -6.7  -3.89354   TTATTCCCACTTTAT TCCGTCGGGCCGCTGGTTGTG ACTG TGCAGGCAGCGGCCTGGGCGA TTATTCCTTTACACA  66 80
CTM43_RS06140 1232293 .. 1232320 + -14.2  -3.05384   AGTATGAGGGGTATA        GGTGCCATAACC AGAG GGTTACGGCACC         TTGCGTCAGAAACAC  83 167
        csrA 1232707 .. 1232732 + -11.1  -2.52543   AGTTACTAAGGTTTC         CGCGCCTCGCT GTGC AGTGAGGCGCA          TCACTTACCGCCGCT  72 32
CTM43_RS06155 NONE
CTM43_RS06160 1233188 .. 1233198 +  -5.4  -4.11304   GTTCGAATCCTCCCG                 GATG CAC CATC                 TTCTTTCTGAATTAA  64 17
CTM43_RS06165 1233414 .. 1233426 +  -4.1  -3.73775   GGTTCGAATCCTCCC                GGATG CAC CATTC                TTTAATAAGAATGGC  55 16
CTM43_RS06170 1233712 .. 1233722 +  -5.4   -3.6471   TCTCCTTAGTAACAG                 CAAC ATT GTTG                 TTATCTGGTTTGCGA  59 176
CTM43_RS06175 1233885 .. 1233895 +  -3.2  -4.50976   TCTCCTTAGTAACAG                 CGAC GAT GTTG                 TTTTATGGTCTGCGA  66 44
CTM43_RS06180 1234564 .. 1234579 + -11.8   -4.0162   GGCCTAATGTTTGGG              GGCGCC TGAG GGCGCC               TTTGTCGTCTGCGCC  91 53
CTM43_RS06185 1235204 .. 1235218 +  -2.8  -3.83026   GCGCGCGGGAATGGA               CGCA GTTGACG TGCG               TTTGCTGTGAGCGAC  54 1
CTM43_RS06190 1235655 .. 1235669 +    -5  -2.55551   CGTGGTGGCACTAAT               TGGACT GAC AGTTCA               TCCATTACAATTATG  46 27
        gshA 1237382 .. 1237396 +  -4.3  -5.07652   ACTGAGACTCGCGGC               TGAAC AAAGA GTTCA               TTTTATTTTAAAAAA  77 131
CTM43_RS06200 1237960 .. 1237984 + -14.2  -2.52623   CTAGTGCTTCCGCCA          CGGCCCGACG CCTGT CGCCGGGCCG          CTCTTCTGACGCCGC  87 37
CTM43_RS06205 1239218 .. 1239232 +    -7  -3.54919   GCTGAAGTCCTGCTG               CAGCCC GCG GGGCAG               TTTCAGACCATGATT  60 475
CTM43_RS06280 1254819 .. 1254836 +  -7.7  -3.83144   CCCTGCGGCCAGAGG             CGCG-CAG GGG CTGACGCG             TATTTGTTATCTTCA  70 70
CTM43_RS06290 1255819 .. 1255858 +  -9.2  -3.15579   GGCGAGGCGGGCTGG  CG-GGAAGAGGCGACTGGC AGA GCCAGTCGCTGCTAACGCG  TTGGTCAGGCCTTCG  67 67
        stpA 1257457 .. 1257492 + -17.6  -3.47349   ACGCCTTCGGGCCAG    CGCCAGGCCGGTGG TGAGAGAC CCACCGGCCTGGCC     TTATGACTTTAAGCG 100 40
        lpxO 1258962 .. 1258972 +  -6.8  -2.74144   CCAGTAAAATCAGGG                 TGCC AGC GGCA                 ATTTGCACCTGGCGC  51 185
CTM43_RS06340 1261376 .. 1261396 +  -4.5  -3.55563   GGAGGTTTTCCGACA            GCGTGCAAG CTA CCGGCGCGC            TTTACGCCATAGCCT  55 73
CTM43_RS06350 1265012 .. 1265035 + -13.2  -6.23209   CTGACCGATCCTCAG          TCCGCAATCC ATTC GGGTTGCGGA           TTTTTTTTTACTTCA 100 55
CTM43_RS06355 1266426 .. 1266439 +  -2.4  -4.21908   TCACTGCTTTATTTT               GTTG TCTGTT CAAC                TTTTACCTGATGGTA  57 187
CTM43_RS06360 NONE
CTM43_RS06365 NONE
CTM43_RS06370 1271053 .. 1271066 +  -8.1  -4.13728   GGTTATTCCCGCTCT               GCTGC CACT GCAGC                TTTTGCACCTCTCTG  74 263
CTM43_RS06385 1273401 .. 1273431 + -18.2  -2.79133   TAACCGCGGCGGCGC       GCCACCGCCGGCAG ACA CGCCCGGCGGTGGC       TATCGTCCACGATTA 100 38
CTM43_RS06435 1283083 .. 1283098 +  -4.6  -4.28254   TTCGCGCTTAGCGCG              CTGCCC GGCG GGGGAG               TTTTCCCTGTTCAAA  64 77
CTM43_RS06440 1283934 .. 1283956 + -13.5   -5.9218   GGTGACGAAAAAAAA           CCGCCTTCA AATTG TGAAGGCGG           TTTTTTTGTTATCTG 100 50
CTM43_RS06455 1289228 .. 1289242 +  -3.5  -2.64155   TGTGTTGCTGCTGAA               TGTCC GGGTA GGGCA               TCACTTTGCACACCA  40 227
CTM43_RS06465 1291009 .. 1291019 +  -3.2  -4.49556   CCCCATCCATATAAA                 CCAG TTC TTGG                 TTTATTTGCTCGAGA  66 329
CTM43_RS06475 NONE
CTM43_RS06480 1295649 .. 1295662 +  -2.3  -4.65933   TTTATTGTTGAGTGC               GGGTG CAGC CAACC                TTTCTTTTGGCAATC  63 513
CTM43_RS06485 1297065 .. 1297095 +  -5.6  -3.58329   ACATGCTGTGTCGGT       TTATGGATTAAAAC CTA GTTTTAAGTCATGA       TTTGGAACATCTTTG  56 130
CTM43_RS06495 NONE
CTM43_RS06500 1299766 .. 1299783 +    -7  -5.08011   TTATTAAAATCCTAA             GCCGTT GCCTAG AACGGC              TTTTTTCCAGATTTT  88 52
CTM43_RS06510 1302599 .. 1302611 +  -4.8  -2.83082   CAACCTCCATTAGCT                CTGG TATTC CCAG                CTTCTGTCTCTTTCC  47 44
CTM43_RS06515 1303066 .. 1303085 +  -5.8   -5.4477   AACTAGCCGTACCTG            TTTCTTTC ACGT GAAAGAAG             TTTTTTTAAGCATTT  90 204
CTM43_RS06520 NONE
CTM43_RS06525 NONE
CTM43_RS06530 NONE
CTM43_RS06535 1307801 .. 1307817 +  -4.5  -2.92246   GGTTATAACTATTGA              CATGATT AAT AATTATG              ATATTTCTTTAATTG  49 54
CTM43_RS06540 1308331 .. 1308343 +  -4.9  -5.10461   TAACTCTTTGTTGCT                GATAA TTT TTATC                TTTTTATTAAATCGA  80 74
CTM43_RS06560 1314082 .. 1314134 +  -5.8   -4.4836   GCGAAGCTATTGAAA GCAAGAGGC-AACTCATCGAAG AAAGCAAAGCG CTTCGGAGAGTTAGCC-CTTGC TTTTAAATTTTATTA  72 76
CTM43_RS06565 NONE
CTM43_RS06570 1316061 .. 1316088 + -12.2  -3.94404   TCTTGAATGAAAAGT        GGCTTGTAATTC TCTC GAATTATAAGCC         TTTGATTCAATGGTT  91 35
CTM43_RS06605 NONE
CTM43_RS06610 1323812 .. 1323826 + -11.4   -5.0925   TCAGCCATAAAAAAA               GCGCTC ATC GAGCGC               TTTTTGCTTTTCCGG 100 59
        grpE 1327695 .. 1327714 + -12.8  -5.39721   TGCTGCCTTGCTCAA            CGGCTGCC TGCG GGCGGCCG             TTTTTTGTGTCATCG 100 45
CTM43_RS06650 1331612 .. 1331644 + -10.6  -4.63218   GGGCTTTTAATATGA     C-ACCGGGCTCCGTT CCTC GATGGGGCCCGGTTG      TTTTATTCACACAAG 100 229
CTM43_RS06655 1331896 .. 1331912 +  -3.6    -3.322   GCCGCGCTGATCAAA              GCCGCT AACAA AGCAGC              TTAATCTGTCACGGT  48 5
        rimM NONE
        trmD NONE
        rplS 1333699 .. 1333720 + -11.5  -5.90231   ACATCCTGATAGAAA           GGGCTGGCC AGAT GGCTGGCCC            TTTTTTTATCTTTGT 100 55
CTM43_RS06675 1334223 .. 1334234 +  -3.6  -4.82855   AACCCGCGCCCCGCC                GCGG CTGT CTGC                 TTTTTCCCTTTAATA  69 1
CTM43_RS06680 1335728 .. 1335758 +  -5.3  -4.13561   GCGGTTTTCGGCGCG      CCCGGCCGCC-GTG TCGT TGCTGGCGATCGGG       TATTTTTTGCCAAGG  66 79
CTM43_RS06700 1339296 .. 1339312 +  -2.1  -3.53224   GGATCTCCGCGGCCA              CCTGGCG GCC CGTTTGG              TTTAAGAGGAAAGTA  47 4
CTM43_RS06705 1340473 .. 1340488 + -10.4  -5.61596   GATGTATACAATAAA              GCCAGC GACC GCTGGC               TTTTTTTATAGGGAT 100 50
CTM43_RS06710 1341835 .. 1341849 +  -7.8  -2.82987   CTTTTTCCATTGCCG               CCGAGG TGC TCTCGG               TATACTCAATCTTCC  54 477
        rluD NONE
CTM43_RS06740 1346050 .. 1346064 +  -5.7  -3.83998   TTAACCTTGAATAAT               TGAGG GATGA CCTCA               TTTAATCTCCAGTAG  64 97
        clpB 1348694 .. 1348722 + -20.5  -3.53012   TAAATCACAAAACGA        CAAAAACGAGCCC AGC GGGCTCGTTTTTG        TTTAAAAACCAGGCA 100 38
CTM43_RS06750 NONE
CTM43_RS06755 1350883 .. 1350918 +    -7  -4.00532   AGACGCGTGCCGAAC    TATCTCAAAACTCATC TTCG GGTGATGTTTGAGATA     TTTGCTCTTTAAAAA  71 61
CTM43_RS06760 NONE
         rrf 1354245 .. 1354293 +   -17  -3.53012   GGAACTGCCAGGCAT CAAATAAAGCAAAAAGCCCGGTC GAAA GACCGGGCTTTTTGCTTT-TGCG TTTAAAAAGAACCCC 100 28
CTM43_RS06775 1356389 .. 1356414 + -14.7  -4.17089   ATCAGCCGGTCAATG         CGGATCCGCCG CAGG CGGCGGATCAG          TTTTCGCACTTTCAC 100 425
CTM43_RS06805 1363026 .. 1363041 + -10.4  -5.65177   CCTGAATGCAAAAAA              GCCAGC TGAT GCTGGC               TTTTTTTATGGCTGT 100 49
        grcA 1364467 .. 1364484 + -14.1  -5.88471   CGCCAGATGTGAAAA             CGCCGGG ATAT CCCGGCG              TTTTTTTTACTCATC 100 47
CTM43_RS06825 1366961 .. 1366979 +  -3.7   -3.4252   GTAATCCCACATCAG             CAGGCGC AGTTC GTGCCAG             TTGTGCTGGATAACC  49 295
        rseD NONE
        rpoE NONE
        rseA NONE
        rseB NONE
        rseC 1371392 .. 1371423 +   -13  -4.53439   GATACGCCTTCCTCC      GACATGGGCCAGTG ATTT CACTGGCCCTTATC       TTTATTTACCTTTCC 100 11
CTM43_RS06860 1373406 .. 1373418 +  -3.4  -3.62572   ACCCTAAGGAGTTGG                CATG GCGAA CATG                TTTGCCCTGATCCTG  53 40
CTM43_RS06865 1374396 .. 1374428 + -15.7  -4.12133   ATTTCCTCTGCTGAA      TTCACGTCGCTGC TGTTATC GCAGCGGCGTGAA      TTATTTAGTATTTAA 100 40
CTM43_RS06870 NONE
         era NONE
        recO NONE
CTM43_RS06885 1377700 .. 1377710 +  -4.6   -2.6186   ATGCTGGAAGCGCGC                 GGCT AAT GGCC                 ATTCTCGGGTTGGGT  46 20
CTM43_RS06890 1378541 .. 1378559 + -13.8  -2.74192   GCTGGTGGAGGAGAT             GGCGGCGC TGC GCGTCGCC             TGCTCTTCGGCGATA  76 481
        aphA NONE
        tadA 1381163 .. 1381181 + -10.2  -2.52464   GCCGCCGTCGATACT             CTGCGCCG CAT CGGTGCGG             TCGGTTAGACCCAGG  62 505
CTM43_RS06920 1386391 .. 1386411 +   -14  -6.06529   CACGCGAACGTATCA            GCCCCCTG CCTGA CAGGGGGC            TTTTTTTTATCTGTG 100 57
CTM43_RS06930 NONE
        qseG NONE
        glrR NONE
CTM43_RS06945 1390915 .. 1390929 +    -5  -3.96841   TTATGCGGGCCGAAG               CATTCG TAA TGAATG               TTGTCTTTGTTGACC  62 125
CTM43_RS06955 1393682 .. 1393697 + -11.8   -5.1287   CGTTGACATCAAAAA              GGCCGC GTAT GCGGCC               TTTTTTGCGTCTGGA 100 48
CTM43_RS06975 NONE
CTM43_RS06980 1399767 .. 1399777 +  -2.4  -3.86015   ACAAGAGCATCTTGC                 GCCC GCC GGGG                 TTTATCGCCAGACTG  52 59
CTM43_RS06985 1401052 .. 1401074 + -14.9  -3.53761   AGCGCCGTCGCATAG           GGGGTGACG ATAAG CGTCACCCC           TTTGGGCGCACCTTC  88 125
CTM43_RS06995 1402975 .. 1402986 +  -4.4  -3.28472   GCCCAGAAGGTGACC                CTGA CATG TCAG                 TAATTTTTACTCCGC  50 11
CTM43_RS07000 1403936 .. 1403954 +  -3.8  -4.07568   CAGCGCCGTCCCTGC            CGG-CGG TGGGAT CCGTCCG             TTTTAGACAGACGCC  60 1
CTM43_RS07005 1404907 .. 1404922 +    -9  -4.62783   AATGACATAAAAAAA              GGAAGC CGCG GCTTCC               TTTTTGACATCAGTA  90 36
CTM43_RS07015 1406610 .. 1406623 +  -3.7  -3.23274   TAAGTAATCGCGTTA               ACGCC GGAT GGCGC                TTCGCTTATCCGGGC  46 34
        iscR 1407417 .. 1407436 +  -5.7  -2.81464   CTTTCAGAATCAGGC            CGGGATG CTCCGA CATTCCG             TGTACTCGGTCGTAC  52 115
CTM43_RS07025 NONE
        iscU NONE
        iscA 1409489 .. 1409516 + -15.6  -4.56914   ATCGGTACTCCTCAA        CCCCAC-CGCGGT CAC GCCGCGCGTGGGG        TTTTAATTTAGATGC 100 40
CTM43_RS07040 NONE
CTM43_RS07045 NONE
         fdx NONE
        iscX 1412496 .. 1412517 + -11.5  -3.72695   GCGAAAACATTTTAA           CGGGCTGCC ATAG GGTGGCCCG            TTTGCTAAGAAGGAT  85 52
CTM43_RS07060 1413873 .. 1413901 +  -8.8   -2.6675   GCCAGGAAAACCATA       TGCCCGCGTGGAC GAAT GGCCGC-CGGGCA        ATTCATTGTGAAGTA  61 72
        sseB 1414702 .. 1414725 + -19.6  -4.62622   AACCGCATTATCTGA          CAGCGGGGGC GGCA GCCCCCGCTG           TTTCTTTATGCTTCC 100 26
CTM43_RS07080 NONE
CTM43_RS07085 1424164 .. 1424188 +  -6.5  -4.45068   ACGGCAGCCGCCAGC          TTTACCCTG CAATAAC CAGGGTGAA          TTTGTTGTTGGCGGT  74 11
CTM43_RS07090 1424817 .. 1424848 +  -8.6  -2.73124   GGCTTCCTTCGCGCA      CCCCGGTCACATAG TTAT CTATGCTCCCGGGG       ATTTGCGAACTCGCC  61 72
CTM43_RS07095 1425165 .. 1425196 + -13.1  -4.85782   ATTTGTAGAATATAG     CGCCCCTGGACGAGC AGTC GCTC-TCC-GGGGCG      TTTCTTTTTCAACCC 100 50
        rlmN 1426425 .. 1426458 + -15.3  -3.86897   AGCGGTCTGACAAAT     GATGACCCGTGCAGC GCAG GCGGCACGGGTCATA      TTTATGGCCGATAGC 100 31
        rodZ NONE
CTM43_RS07110 1428874 .. 1428904 +  -9.1  -5.07275   CTTCCCGTGTATGAT      TGAACCTGCGGGCGC GAG GCGCC-G-GGGTTCA      TTTTTGTATATATAA 100 60
CTM43_RS07115 1430195 .. 1430215 +  -2.5  -2.82895   CGCATTTGCGCACAC            TTCTGGG TTAATCT CCCGGGA            ATTATTAGTCAGGAG  40 15
CTM43_RS07120 NONE
        bamB 1432077 .. 1432099 + -16.3   -4.5366   TGAGTGATTAAGAAA           CGGCCCCTG GCAGA CAGGGGCCG           TTTTGACTTTTTTAA 100 53
         der 1433650 .. 1433663 +  -9.5  -5.24129   CAAATAATCATTAAA               CCCGC TTCG GCGGG                TTTTTTGTGGCCGCC 100 34
CTM43_RS07135 NONE
CTM43_RS07140 1435205 .. 1435218 +  -2.3    -4.614   GTGGTGAGCAGATCG               CCGGT TTTG ACCTG                TTTTGTCTGCTTCAG  66 124
        guaB 1438112 .. 1438134 + -14.9  -4.56113   GGGCTCCTGATTTCT           TCGCCCGAC CTTGC GTCGGGCGA           TTTATTTACTCTGTT 100 31
CTM43_RS07155 1439780 .. 1439799 + -12.2  -5.64274   CTGAGTAAAACGAAA            CCCTCTGT GTTT ACAGAGGG             TTTTTTTATAGCTGC 100 54
CTM43_RS07175 1445866 .. 1445879 +  -3.1   -4.4388   AATAAGATTTATTAA               TGTTG GTGT CAGCA                TTTGTTGATTTATAT  62 504
CTM43_RS07185 1448267 .. 1448286 + -16.4  -2.56596   GCTGAGCAGCAAAAA            GCCGGGCG TAAG CGCCCGGC             TCGGTTGATAGCCAG 100 36
CTM43_RS07210 NONE
CTM43_RS07215 1456441 .. 1456458 +  -8.4  -5.76633   CACCCCGCACCCAAG             CCGGAG CCTCGC CTCCGG              TTTTTTTGTCTCTAA 100 104
CTM43_RS07220 1457224 .. 1457242 +   -11  -5.81412   TATACCGCGAAAAAA             GCCGACTT TGA GAGTCGGC             TTTTTTTTGAATAAA 100 43
CTM43_RS07225 1458600 .. 1458620 + -15.4  -3.54951   ATAACGATCGCCTGA            CCGGGCGG CGATC CCGCCCGG            TTCTCTCCTGACCTA 100 37
CTM43_RS07230 1459478 .. 1459492 +  -5.6  -3.98745   CAGCATAGCGACAGC               GATGCG CTG CGCCTC               TTCTTTCCGTCCTTC  64 115
CTM43_RS07250 1463556 .. 1463595 + -16.4  -3.65199   GGCAATGAGAATAAA  AAAAGACGCCGGGCGAGG GCTT CCTCTCCCGGCGTCTTGC   TTTGCATCAGGCGTT 100 41
CTM43_RS07265 NONE
        bamC 1466732 .. 1466751 + -11.4  -4.85129   AACAAGTAATCAAAA            GGGCTGGA GCAA TCCGGCCC             TTTTTCATGTATAGT 100 32
CTM43_RS07275 1467663 .. 1467694 + -17.4  -3.30908   TCGACTAACCCGCCC      GCCGCCAGAAGATG GCCT CATCTTCTGGCGTC       TCTTGCTGTTTCCTG 100 33
CTM43_RS07280 NONE
CTM43_RS07285 1470682 .. 1470692 +  -3.2  -2.87132   ACTCATTCAGTTAAA                 TGGC ATG GTCA                 TATCTGGCGAGCGGC  43 44
CTM43_RS07290 1471874 .. 1471896 +  -6.9  -3.89971   CGTCCGTCTGAGGTG           CCGCCGTTG GTTAA CAGCTGCGG           TTTGATCTCATTATA  66 464
CTM43_RS07310 1473694 .. 1473712 + -14.6  -4.79752   TGAACACATAAAGAA             GGCGACCA CCG TGGTCGCC             TTTTCTGTTATTACG 100 81
CTM43_RS07325 1479228 .. 1479276 + -14.6  -2.92091   TCACTGACGACAAAC CCGGCTCCGCAGCGTAGTATGA GGGCG TCCTTTTACGCTGTGGGGTCGG TATGTCACTCAATAT  90 34
        nudK NONE
CTM43_RS07335 1481396 .. 1481406 +  -3.2  -4.36914   CCGGGGTACGCGGCA                 TCTG CGC CAGG                 TTTTGTCGCGACAGG  64 437
CTM43_RS07350 1486566 .. 1486599 +    -6   -4.8622   CCGCGCGCAATATCA     GGCAGGC-CGGTG AGTAAAAAA CGCTGAGCCTGCC     TTTTTAATTCCACCG  81 76
        eutS NONE
        eutP NONE
        eutQ NONE
        eutT NONE
         pta 1490039 .. 1490056 +  -2.6  -2.57132   CGCTGGTTGAATGAA             TGGTCC CCTTCA GGACCC              CTTATGAGAGGAAAA  40 27
        eutM 1490410 .. 1490460 +  -9.6  -4.09685   CCGGATAAGACGCCA GCGCGTCGCTATCCGGCCATGA AAAGGCA TGAATGCCGGATGGCGTTGCGC TTTTCCGGCCTGCAC  81 69
        eutN NONE
CTM43_RS07390 NONE
        eutJ NONE
        eutG 1494344 .. 1494378 +  -5.6  -3.05819   CGTTCACGCCGCGGC     CCGGGAAAGTCGCC TGAGTGC GGCTAATGTCCCGG     TATTCACAGTATCTA  51 146
        eutH NONE
        eutA 1497046 .. 1497063 +  -4.1  -2.58544   GAAATCACTCGCATT             TCCTTCC TGAG GGAACGA              CTTATGAAACTAAAG  44 16
        eutB NONE
        eutC NONE
        eutL NONE
        eutK 1500527 .. 1500549 + -12.6  -3.62591   TAACCTGTCGGAGGT           GCCGGGAGCG GCT TGCCCCCGGC           TTTAACGATTATGAA  90 38
        eutR 1501877 .. 1501888 +  -7.2  -2.64651   AGTGGCGCTCGCGTT                CGCC GTAC GGCG                 TGGCTTTCCGGCGTT  50 290
CTM43_RS07450 NONE
CTM43_RS07455 NONE
CTM43_RS07460 1505191 .. 1505206 +    -9   -2.7795   ACAATGGCGCGTTAG              CAACGC GACA GCGTTG               TGGTTGCATCATTTC  65 79
CTM43_RS07465 1506193 .. 1506210 +  -4.1  -4.29738   TAAGGTGCGGCTATG             GGATCTG CGTG CGGATTC              TTTTACTCCCTCTCC  62 87
CTM43_RS07475 NONE
        cysT NONE
        cysW NONE
        cysA 1510652 .. 1510677 +  -8.9   -5.4833   TCACGCGTCTGCCAG         GCCGGGTAAGCG AAG CGCC-GCCCGGC         TTTTTTATTGAGTAA 100 98
        cysM 1511998 .. 1512010 +  -5.5  -2.98545   CCGGGTCAGGGTGAT                GCATC TCT GGTGC                TCCTTGTTGTGAGCG  48 414
CTM43_RS07510 NONE
CTM43_RS07515 1514632 .. 1514649 + -12.7  -4.82901   GCGGTATAAAAAAAA             TGGCGCC TTTC GGCGCCA              TTTTTATGCAGCAAG 100 32
        zipA 1520860 .. 1520876 + -10.8  -5.38249   TCAATTCCTTCTCAA              CCCCCG CCTGT CGGGGG              TTTTTTATCATTGAT 100 55
CTM43_RS07550 NONE
CTM43_RS07555 1523141 .. 1523153 +  -6.9  -4.25104   AGCGCGTTAGGCTTT                GGCCG CGT TGGCC                TTTTCCTCAGCGAGA  71 31
CTM43_RS07565 1525204 .. 1525220 + -11.5   -4.7629   CGCGCATAGCAAAAA              GGCGCCT TTA GGGCGCC              TTTTTACATTGGTGG 100 84
CTM43_RS07595 1527327 .. 1527344 + -12.7  -6.08563   ACGCAGCTGAAACAA             CGGCAGG TTAC CCTGCCG              TTTTTTTTGTCTGTT 100 46
CTM43_RS07610 1528406 .. 1528420 +  -3.5  -3.95584   TTAGCTCCACCAAAT               TCTGC ACCCA GCGGA               TTTGGTTCGTAAAGA  55 29
CTM43_RS07615 1528530 .. 1528547 + -10.5  -5.61881   CACCAAAATTCAGAA             CCCTCGC TTCG GCGGGGG              TTTTTGTTTTTAGCG 100 36
CTM43_RS07620 1531193 .. 1531203 +  -3.2  -3.73953   ATGGCGACGAATTCA                 TTGG AGA CCAG                 TTTGGTAGCCATAAT  52 318
CTM43_RS07630 1533762 .. 1533791 + -16.5  -3.15742   CTGATGCTGAATAAA       GTAAAGGGGAGCC GATG GGCTCCCCTTTTC        GTTTGTTAGTGATGG 100 48
CTM43_RS07645 1537557 .. 1537579 +  -2.6   -3.3422   CCCAGCAGCAGCCCG           CCGATGCCGA GGG TCAGGATTGG           ATTTTTCAACCGATG  46 467
CTM43_RS07655 1539577 .. 1539619 +  -6.9  -3.65425   GGCCAGGTGCTTTAA GCATTCTTCTCCCGGGCTAC CGTC GTAGCCCGGATGGCG-GTGC TTTCCGCTCTCTACA  63 26
CTM43_RS07675 1543702 .. 1543721 + -10.7  -5.75342   ACGGCAAAATAAAAA            CGGGAGC ATGAAG GCTCCCG             TTTTTTTTGACACCG 100 54
        cynR 1546919 .. 1546939 +  -5.4  -3.81414   GCCTTCATCGGGCTG            GGCATTCT CTATA AGCATGCC            TTCTTCCTTAAGCCT  61 98
CTM43_RS07710 1550067 .. 1550089 +  -7.2  -3.05997   CAAATGACATAAAAA           TTTTTCATTT TTT AAGTGAAAAA           TATGATTTATCGGGG  59 201
CTM43_RS07715 NONE
CTM43_RS07720 NONE
CTM43_RS07725 1553050 .. 1553060 +    -4  -2.85019   TAGAAGGAGATGTTA                 TATG ATA CATA                 TCAATTTTTCAAATT  45 95
CTM43_RS07730 1553824 .. 1553838 +  -3.6  -2.89079   TATGTTTATCAGGTG               GTTATA ATC TATAGC               TATAATAATTGTATT  43 259
CTM43_RS07735 NONE
CTM43_RS07740 NONE
CTM43_RS07745 NONE
CTM43_RS07750 1556838 .. 1556850 +  -3.4  -3.91032   ACTGTACTTTATTCA                GTTG AGGTA CAAC                TTTGTCGAGTAGTTA  55 266
CTM43_RS07760 1558106 .. 1558122 +  -2.9  -2.94099   GCACTAAGTGGAAAA              CCTCTTG GAA CAGAAGG              TCTGTAATGAGCGAG  43 254
CTM43_RS07775 1560661 .. 1560678 +  -8.3  -2.80816   ACAGCAGATTTACCA             GCGCACG GTCG CGAGCGC              TGTCATACATCAGCG  54 465
CTM43_RS07785 1562191 .. 1562204 +  -2.3  -3.02144   TATCCATGTAACGGA               GACCG GTGT CGATC                TGTTGACGCCGGTAC  42 264
CTM43_RS07800 NONE
CTM43_RS07805 NONE
CTM43_RS07810 1564785 .. 1564797 +  -3.5  -3.34716   TAAGTGTCGTCGATA                TTTTA GTG TAAAA                ATTTTTGAAAACTAA  48 211
CTM43_RS07815 NONE
CTM43_RS07820 NONE
CTM43_RS07825 NONE
CTM43_RS07830 1570113 .. 1570139 +  -3.8   -5.0133   TAAATTCGATAAGTT         TATATATAGTCA GGA TGACTATAACTA         TTTTTTGCAAGGATG  77 124
CTM43_RS07835 1570676 .. 1570686 +  -3.2  -4.29493   CATCAGCTTTCACAA                 GCTT AAC AGGC                 TTTGTCTGTTTCATA  64 115
CTM43_RS07875 1575726 .. 1575736 +  -2.6   -5.1101   CTATTTTATTTAATA                 TTAT ACT ATAA                 TTTTTTCAGTCATGA  74 417
        hxsD NONE
        hxsB NONE
        hxsC NONE
        hxsA NONE
CTM43_RS07915 1581553 .. 1581565 +  -3.3  -3.53444   TTTGTAAGTTACAGT                CCATG TAT CTTGG                TTTAGAACAAAGTGG  50 91
CTM43_RS07945 1586414 .. 1586424 +    -4  -2.99543   TATTTATAGGGGTTA                 TCTT AGG AAGA                 ATATTTTTAATGCTA  47 55
CTM43_RS07950 NONE
CTM43_RS07955 1587567 .. 1587579 +  -4.9   -3.9279   TCAAACTCTAAATAA                TGATT CGG AATCA                TTTCTACCGTTGGCT  59 26
CTM43_RS07965 NONE
CTM43_RS07970 1590856 .. 1590883 +  -3.5  -5.43414   GTGTATAAGGTTTTA        GCTAAGTTGAT TTTTTT ATTGACTTGGC         TTTTTTGTGTCTGGT  81 83
        mlaA 1594815 .. 1594835 + -14.1  -5.24129   CGAATGATAAAAAAA            GGGTGAACA TAA TGTTCACCC            TTTTTTGTGGCGCGC 100 45
CTM43_RS08000 1596852 .. 1596869 + -12.7  -4.41486   ATCCTTCCCCCTCGA             CGCCCCT GATT AGGGGCG              TTTCCTTTTCTTTTC 100 40
        fadI NONE
        fadJ 1600655 .. 1600665 +  -5.4  -2.81584   GGTTAACAAAAGCGG                 TGCA ATA TGCA                 AGTTTTTATTATGCG  49 229
        sixA 1601215 .. 1601238 +  -8.8  -4.28994   CTCAATCAATATCAG          CAGTGCGGCG TCAC CGCCGTACTC           TTTTGGTGCCTGGTG  81 94
CTM43_RS08025 NONE
CTM43_RS08030 NONE
CTM43_RS08035 NONE
CTM43_RS08040 NONE
CTM43_RS08045 NONE
CTM43_RS08050 1606452 .. 1606485 +  -6.5  -3.07113   GCCTGAGCCATGTTG     TAGCCCGGGTCAGGC GTCA GCCGTACCCGGGAAA      TTGCCTGCCCTCATG  55 35
CTM43_RS08060 1609891 .. 1609909 +   -16  -5.36965   CATGTGATGCGCAAA             GGGGAGCC ACC GGCTCCCC             TTTTTTGTCATCTTG 100 45
CTM43_RS08065 1611420 .. 1611433 +  -8.1  -2.74192   TAGCGCTCCACGTCC               GCCTG GCGA CAGGC                TCCTCTTGCGGGATG  54 189
        pdxB 1613579 .. 1613607 + -11.6  -3.33097   TTAATGTCTTCTTAA        TGCCCCTGCCGG ATACG CCGGCGGGGCCG        CTTTATTTCTGGAGT  82 37
CTM43_RS08080 NONE
        truA NONE
CTM43_RS08090 1616152 .. 1616188 + -16.7   -2.7641   AAGTAGTTCGCCCTG   CGCTGCGCGTGACCGA GCATGA TC-GTCGCGCGCAGCG    GTTTGACCACTTTTT 100 35
        accD 1617259 .. 1617282 + -13.8   -5.5112   GCCTGATAAAGCAGA          GGGCAGGGCC TGGC GGCGCTGCCC           TTTTTTATTCATACG 100 35
CTM43_RS08100 NONE
        dedD 1619362 .. 1619387 +  -9.8  -5.42975   AGGCGAAAGGCAGTC         TGGCGTTGAA TGTTTT TTCAGCGCCA          TTTTTATTTCTGTAG 100 115
CTM43_RS08110 1619966 .. 1619985 +  -9.4  -2.77899   TCGTCAAGTTTCTTG            CCTAAAGT ATAG ACTTTAGG             TCGTTGCTGAACGAG  65 14
CTM43_RS08115 1621547 .. 1621573 + -12.3  -5.41143   GTTCACGCGTCGCGG        GCCTGCCGTACC GAAA GG-ACGGCGGGC         TTTTTTTCGCCCCTC 100 44
CTM43_RS08120 1622351 .. 1622363 +  -5.5  -3.18404   GGCGCTGCGGTTTCG                CCAGT AAT GCTGG                TATCTTCCCTTTTAA  52 143
        argT 1623306 .. 1623344 + -13.1   -2.5655   GTACGGCGACTAAGA  CT-GCTGCAGGCCCGCAC AATG GGGTGGGCCTGCCGCCAG   GTTCGTATCCATGCC  81 28
        hisJ 1624360 .. 1624378 +  -2.3  -3.53444   GGCGAATAATTCTCA            CGCCTCGC CATT GCGTG-CG             TTTCGCGCGCAATGG  47 32
        hisQ NONE
        hisM NONE
        hisP 1626864 .. 1626895 +    -2  -4.60487   CCTGAGCCTGAGGCA      GCAGCGCGTAGCCG ACGT CAGCTTCGTGCGGA       TTTTTCGGACTGATG  66 291
CTM43_RS08170 NONE
CTM43_RS08175 1630724 .. 1630738 +    -5   -3.6003   ATGATAATCAGGTTA               TTGCAG AGG TTGCAA               TTTACCCGTAATTTA  55 0
        yfcD 1631409 .. 1631426 + -12.7  -4.54727   TCCTGACGACAAAAA             GGCAGCC ATTC GGCTGCC              TTTTGCTTTGACCAC 100 76
CTM43_RS08195 1635820 .. 1635844 + -15.1  -4.41616   AAAACGCATATAAAA          GAAGGCGCATG ATT TATGCGCCTTC          TTTATTTCACGCCCT 100 51
CTM43_RS08200 NONE
CTM43_RS08205 1637060 .. 1637077 +  -9.8    -5.252   TAAACCCATGATTTC             GCCCCG CGTCGT CGGGGC              TTTTTTATGCCACTA 100 38
CTM43_RS08210 1639440 .. 1639454 +  -5.6  -4.72272   TCGGCGTTGACCTGG               CCGCCA AAT TTGCGG               TTTTTAATCGCCGCC  79 509
        lrhA 1642680 .. 1642706 +  -3.1  -3.14344   TCCGGAAGAGGGAGG         GAATACCTT GGTTTTGTA AGGGTATTC         TTGCTAACAAAGATC  45 7
CTM43_RS08230 NONE
        nuoA NONE
CTM43_RS08240 NONE
CTM43_RS08245 NONE
        nuoE NONE
        nuoF NONE
        nuoG NONE
CTM43_RS08265 NONE
        nuoI NONE
CTM43_RS08275 NONE
CTM43_RS08280 1653364 .. 1653379 +  -2.5  -3.18199   TTCAGTAAGTGAGTT              GCGTG GATGAA CATGC               TTGCCTTAACCATTC  43 16
CTM43_RS08285 1655344 .. 1655357 +  -4.5  -3.53444   ATTCGTTGAAAATCG               GTCCT GAAC GGGAC                TTTAACAAGGAATAA  55 158
CTM43_RS08290 NONE
CTM43_RS08295 1658396 .. 1658410 +  -9.2  -5.60993   TGACTCAATAAAAAA               CCGCCG GGA TGGCGG               TTTTTTTATGCCCGG 100 47
CTM43_RS08305 1659965 .. 1659981 +  -4.3  -4.26903   TATTCCGTCGTCGAA              CCCCTTA TAA TGTGGGG              TTTTACTACCGTGGA  62 122
        menF NONE
CTM43_RS08315 1663025 .. 1663041 +  -2.2  -2.82516   CCTCCAGCAGCTGCT              GGCG CAGGTAAGT CGCC              TGTGATCCTCAGCGC  40 4
CTM43_RS08320 1663777 .. 1663787 +  -5.4  -3.31322   GGCGGTGATTGCCTG                 TCTG GCG CAGA                 TTCTGGCAAGTTAAC  54 1
        menB NONE
CTM43_RS08330 1665620 .. 1665630 +  -2.4  -2.65766   GCTCAACATTGATGC                 GCTG GAG CCGC                 TGCTGTGACCTTTAA  39 7
CTM43_RS08335 1667424 .. 1667450 +  -5.3  -3.45945   AACCCCGCGGTCGGC        GGCCATT-T-TGC AAA GCAGATAATGGCC        TTCATTCTCGATCAG  53 438
CTM43_RS08345 1668587 .. 1668615 +  -9.4  -2.56656   TTATTCCCTTATCCA        CCCGCGCCGCGC CGATC GTGCGGCGCCAG        CTCTCTGTTTTCGTC  63 41
CTM43_RS08355 1669393 .. 1669422 + -11.4  -4.32034   CAGCTTCTAATCTCT       TCCGGCGCGGCA TCTTCT TGCTGCGCCAGA        TTTTCCTCCTCGTCA  93 31
        cinA 1670761 .. 1670774 +  -3.8  -3.27406   TCTGAAAAAATTCTG               TGCG TTAAGT CGCA                ATTTTCTGCTGCGAA  50 100
CTM43_RS08365 NONE
CTM43_RS08370 1672896 .. 1672926 +  -2.5  -2.56271   TATCAACACTGATTG      CGTCAGGCCGCCCGG CGG CCCG-CG-CCTGAGG      ATATTATGATGAGCA  39 29
CTM43_RS08375 NONE
CTM43_RS08380 1675457 .. 1675473 +    -8  -3.22475   GGTGGCAAGCTCGAC              GCGATC GCGAA GATCGC              TGTTATCGACATCGA  59 440
CTM43_RS08400 NONE
CTM43_RS08405 NONE
CTM43_RS08410 1682475 .. 1682502 +  -9.3  -4.08216   AGGGAAGGGTGTTCA        TC-CTGACACTC AAGGC GAGTGTCAGAGA        TTTTCAGGAAGATCC  78 361
        gyrA 1689923 .. 1689939 + -13.7  -5.68023   TGATATCGCACAGAA              GGGAGGC CTG GCCTCCC              TTTTTTTCGTTCTGA 100 51
        rcsC 1700504 .. 1700542 +  -5.3  -5.00616   GCACTTCGCTCTCTT  TCGGCGACAGGCGTTTAT CGCC ATAGCCGC-TGGCGCTGA   TTTTTTCCAGCAGGC  83 262
        ompC 1705528 .. 1705542 + -12.8  -5.71712   GATGCATAACAAAAA               GGCGCC TCT GGCGCC               TTTTTTTATGTCCGG 100 48
        apbE NONE
CTM43_RS08500 NONE
        alkB 1708477 .. 1708502 +  -5.3  -4.67038   TATTCTTGATGTCAT         CGGCGAGCCGT TTAA ACTGCTGGCTG          TTTTGCTTTTGCGGA  75 50
CTM43_RS08510 1710172 .. 1710210 +  -6.6  -4.13014   CCCGTACGGCCTGAT  TCACAACGCGCGCCCGG AAAAGC CCGGGCGC-CGCTGAAA   TTTTCAGCGTCTACA  68 27
        mgtE 1712059 .. 1712069 +  -8.2  -2.76261   TTGAGAGGCGGCTGC                 GGGC CCG GCCC                 ATTTCCACGTTCACG  54 329
         mqo 1714890 .. 1714909 +   -15   -5.4756   ACGCTCTGACAAAAA            CGGCAGCC TGCG GGCTGCCG             TTTTTTATTGCCGTT 100 44
CTM43_RS08555 1720292 .. 1720336 + -20.7  -3.35798   CTGAACGGGGACGAT CTCCACGCCGCTCTGCACCAA CTG TTGGCGCAGCGCGGCGTCGGG TTCTCCATCGACAAT 100 66
CTM43_RS08565 1721916 .. 1721928 +  -4.8  -4.14392   AAGCCCTTCCTGCGG                CGTC GGCTG GACG                TTTTGCGCATTCGCC  64 230
CTM43_RS08575 1724178 .. 1724192 +  -2.8  -3.99062   GACGGTCAGAACTTC               GCTG TAAAACT CAGC               TTTGTCCTGCATGTT  58 195
        rsuA NONE
CTM43_RS08595 1728318 .. 1728333 + -11.8  -4.26202   TAGGTCACATTTTCA              GGGGCG AAAT CGCCCC               TTTCTTGATGCATGT  91 38
CTM43_RS08600 1729394 .. 1729413 +  -5.6   -3.1994   GCCGCCGTCAGCGTC            GGCTGGTG GACG CGCAAGCC             TTCCTCAATGATCTG  51 438
        uxuA 1742064 .. 1742081 + -11.3  -5.21709   TGGGGATAATAAAAA             GGACAGC CAGC GCTGTCC              TTTTTTACTGTCGAA 100 50
CTM43_RS08660 1743521 .. 1743550 +  -4.2  -3.29144   GGAATTTCCAGTCCG       GC-GGCGGTGC CCATCATCA GCCCCGCCAGC       TTCTCCGGCAGATGC  50 462
CTM43_RS08670 1744578 .. 1744589 +  -3.6  -2.84317   CGGCAATTCGTTCCC                CGTC AGAT GGCG                 CCTTTTTTCTCAAGT  43 165
CTM43_RS08675 NONE
CTM43_RS08680 NONE
CTM43_RS08685 1748441 .. 1748458 + -12.7  -5.77988   TACCGCAATAAAAAA             GGGCCGA CTGT TCGGCCC              TTTTTTTGTCTCTAT 100 44
CTM43_RS08700 NONE
CTM43_RS08705 1751635 .. 1751649 +  -3.6  -2.90615   TGGCAATTCCGCAGG               TTAGTG CTT TACTAA               TAATTTGCGGGCGAT  43 79
CTM43_RS08710 1753451 .. 1753468 + -11.3  -5.90231   TGTCATCACCCGGAA             GCCCTCT GAAC AGAGGGC              TTTTTTTATGTTTGT 100 247
        cirA 1755733 .. 1755769 + -15.1  -2.71712   GCATCCTGTAGGCCT    GAACATGCGCCGCGAAG CAG CTTCGCGGCGCATTGGC    GTTTAGCCAAAGAGA  95 57
        folE NONE
CTM43_RS08740 NONE
        galS 1760189 .. 1760206 +  -4.9  -4.49556   AGTCTGAACCACGAG             GTGATGGA TAT TCC-TCAC             TTTATTTAGTAGGAA  71 127
        mglB 1761398 .. 1761420 +   -17  -2.84693   TCGTGATGTGAGTTG           CGGGCGTGGG TTA TCCACGCCCG           ATTATTCCTGATACA 100 41
        mglA NONE
        mglC 1764066 .. 1764082 + -15.1  -5.76633   TGAACGCATCAAAAA              CCCGCGC CTG GCGCGGG              TTTTTTTATATCTGA 100 44
        dusC 1768625 .. 1768663 + -16.3  -6.15828   TGAACTCAGGCAAAA  CCTAAGCACTTT-CGTCA TTCG TGGCGCAAAGTGCTTAGG   TTTTTTTTTGGTAAA 100 148
CTM43_RS08790 1770325 .. 1770356 + -11.6  -6.02919   CTGCGGCAGGCAAAA      CCTGATCACCTGGCG TTT CGTCGGG-GGTCAGG      TTTTTTTGTTTCTGG 100 127
        bglG 1771258 .. 1771291 + -10.9  -6.28401   ATGATGCAGGCAAAA     CCTGAGCGCGACGCC CACC GGCGTGGTTCTCGGG      TTTTTTTATTTTTTA 100 71
CTM43_RS08800 NONE
CTM43_RS08805 1774649 .. 1774669 +  -6.8  -3.53012   CCCGCCCGGCCATCG            CCGGGC GGGGGGTTA GCCCGG            TTTACGCGCGCGCAG  61 47
        mdtQ 1776974 .. 1776995 + -15.1  -2.72508   AGTAACCGCCAACCA           CGGTGCGCC CGCG GGCGCGCCG            CTTAGTCTTTCTTCT  95 36
CTM43_RS08825 1778327 .. 1778370 +  -2.5  -4.18702   GGCGGCACGGGTAAA T-ATGCATTGCCGGCAAATA TGTAT TTTATGTCGGCAATGCAGCA TTTCTTCACGATTCT  57 44
CTM43_RS08830 1779452 .. 1779497 + -13.3  -2.72043   AGAACGATTAATCTG CATGTCTCCCGGATGGCGGCGC ATT GCGCC-TTATCCGGGCTACGTG ATTTGGCACCGGGTT  84 30
        bglX 1784582 .. 1784597 + -10.4  -5.27023   ACGTCACGCTTTAAA              GGCCGA TTAA TCGGCC               TTTTCTTTTTCGCAT 100 60
CTM43_RS08850 1785609 .. 1785620 +  -2.2  -2.78596   TGAAGTAAGCCACCG                GTGA CCAT TCGC                 TGTACTCACCGCGTC  40 33
CTM43_RS08855 NONE
CTM43_RS08860 NONE
CTM43_RS08865 1788591 .. 1788604 +  -4.5  -4.60924   TAATTGCGGTTTAGC               GCGCCG CGC CGG-GC               TTTTTGCCGCGTTTG  71 189
CTM43_RS08875 NONE
        yehT NONE
CTM43_RS08885 1791755 .. 1791773 + -14.6  -5.72254   CCGGGCAAAAAAAAA             GCCGGAGA TAC TCTCCGGC             TTTTTTGTTATTTCA 100 116
        apbC 1795121 .. 1795170 +  -4.2  -5.48213   TGCCCTCGGGCGACG CGCCCTGTGCTTCGATGGTC CAGCCATGAC GCTGGTAGAAGCGCAGGGCG TTTTTATTTTCCATC  87 69
CTM43_RS08910 1797372 .. 1797382 +  -6.8  -3.71848   GGGCGATTAATCTGC                 GGCA TGT TGCC                 TTCTTCATCCAGCAG  63 487
CTM43_RS08925 1801451 .. 1801474 +  -9.6   -3.1552   TGGCGGCATGCTGGA          GCAG-CGGGAC GCC GTCCTGACTGC          TGTTAATCAGTACCA  70 384
CTM43_RS08940 NONE
        thiD NONE
CTM43_RS08950 1804608 .. 1804627 +   -15  -3.35961   TGCATAAGGCAAAAA            TCCGGGCG TCAC CGCCCGGA             TTGCTCGTTGTTTGT  93 34
CTM43_RS08970 1809756 .. 1809774 +  -4.5  -4.27117   AGCCGCCTTTAAGGG            CGGCCAGG ATCG CC-GGTCG             TTTATGTTCTCCACA  67 119
CTM43_RS08980 NONE
        xylB NONE
CTM43_RS08990 1815029 .. 1815053 + -15.8  -3.16564   TCTCGTAGGTACTGC          GGCTGGCATG CGCTT CATGCCAGCC          TTAATGAGGTGAACG 100 33
CTM43_RS08995 1815860 .. 1815890 +  -9.7  -2.57013   CCAAACCGGTTTTTT      TGCCGGGT--GGCGG CTG CCGCCTGACCCGGCC      TGGGTTGACTTCCCC  66 153
CTM43_RS09040 1831483 .. 1831503 + -10.4  -3.01712   AAGCCTGATCCTGCC            GCGCCCTT TCACT GAGGGCGC            TATTCCACACGGAAA  72 33
CTM43_RS09065 NONE
CTM43_RS09070 1838847 .. 1838882 +  -3.3  -2.57132   GCAAAGAGTAGCCCT   GTTGCCCTCTCCGC-CGC GAA GCGTGCGG-GAAG-CAGC   CTTATAAGGAGAAAG  42 62
CTM43_RS09075 NONE
        asmA 1841371 .. 1841396 + -18.3  -2.86271   TGTAATTCCCACCCC         CGCGGCCCGGA AGTT TCCGGGCTGCG          TGCTTATCGTCAACG 100 36
        galF 1845006 .. 1845022 +  -2.3  -3.34233   ACGTTATGCAGAAAT              TATTCAT AAC GTGAATG              TTATAACGATTGTAA  45 94
CTM43_RS09095 1845954 .. 1845965 +  -2.2  -4.64861   CTCCACAAGCAGGCC                TGGT AATC GCCA                 TTTGTTTTACAGGGG  63 20
CTM43_RS09100 1848390 .. 1848410 +  -2.6  -4.60797   GGGAGAGCGGTGATA           GC-G-CTGCA GGA TGCAGTCAGC           TTTTCTCTCTCCGCA  65 61
CTM43_RS09105 1849618 .. 1849638 +  -2.6  -3.46088   GGAAACTGCGAAATT            TATTAAGG ATTGG CCATAATA            TGTTTAGTACAATAT  49 7
CTM43_RS09110 NONE
CTM43_RS09115 1852272 .. 1852288 +  -5.1  -5.08169   TAGGTTACTCAAGAA              GGGGA CGAAGAA TCCCC              TTTTTTAAAATATAT  82 38
CTM43_RS09120 NONE
CTM43_RS09125 NONE
CTM43_RS09130 NONE
CTM43_RS09135 NONE
CTM43_RS09140 1858467 .. 1858479 +  -4.9  -2.62263   ATCATTCAGGGGGGT                GTAAT GAA ATTAC                TCATGTCAAAAAGAT  46 53
CTM43_RS09145 NONE
CTM43_RS09150 1860940 .. 1860951 +    -3  -3.07537   TACGTTAATGAAACT                TATC GACA GATA                 TGCTTGTTTATAAAT  43 63
CTM43_RS09155 1862386 .. 1862400 +  -7.2  -3.50449   TTATTGATAAGATGC               TGCTTA AGA TAAGCA               TTGTGCATTTATAGT  64 34
        gndA 1863961 .. 1863984 + -16.8  -3.77437   AATCTTTATATGCCA          CAGTCAGGCC ATTT GGCCTGACTG           TTATCTATTGTTAGT 100 39
CTM43_RS09165 1865585 .. 1865597 +  -7.7  -2.65832   ATTATTCGTATTAAA                GACCA GTA TGGTC                GTTGCTAATTTTTTC  58 5
CTM43_RS09170 1867018 .. 1867058 +  -5.6  -3.96068   TTATCCATAATGGAA  GCCATAGGGTCAGA TTTTAATCGTATT TTTGACCTTATGGC  TTATTCTTGACATCC  61 45
CTM43_RS09175 1868343 .. 1868367 + -13.6  -4.18983   ATTCTGCCTGTCTGA          CACTGGCGGT TCCCT GCCGCCAGTG          TTCTTCTTTATCTCC 100 40
CTM43_RS09190 NONE
CTM43_RS09195 NONE
CTM43_RS09200 1874718 .. 1874728 +  -3.2  -3.42702   AAATATTATTACAAA                 GTAC GCC GTGC                 TATTCTTGGATAATA  48 2
         glf 1875886 .. 1875897 +  -2.2  -4.05033   AAAATCAGCCAATGC                CTGT GTTT ACGG                 TTTCTGTACGATGAA  55 0
CTM43_RS09210 NONE
CTM43_RS09215 1878032 .. 1878056 +  -3.7  -2.74292   TTTACTACTAATGGT          GTTTTTTTATG GCT CATGAAAAAAG          TGATATAATTGTTTC  42 113
CTM43_RS09220 NONE
CTM43_RS09285 1890556 .. 1890578 +  -4.7  -2.73483   GATCCGCTGGTGATG           CCGATGGAG TGATC CGCCAGCGG           TGATTCGCATACCGT  46 14
CTM43_RS09290 1891597 .. 1891627 + -11.3  -5.52384   CTGAAAACCAGAGAC       TAGCCGACGCTTT TTTTT AAAGTGTCGGTTA       TTTTTTTGGTCGAAA 100 126
        yoeI NONE
CTM43_RS09300 1893171 .. 1893190 +   -15  -6.02546   ATGTAAATAAGAAAA            GCCGGAGG GAAA CCTCCGGC             TTTTTTTTCGTTTGG 100 52
        fusA 1895988 .. 1896020 + -15.5  -2.66316   AAAGCTAAGCAACGT      TCCCGGGTGCGACGC GAG GCGTCTTACCCGGGC      TACTCTGGTACCAGC  95 33
        dacD 1898981 .. 1898998 +  -8.4  -5.79526   CTGTAACCACGCCAA             CCGCCT CTTTGC AGGCGG              TTTTTTTTCGCCTGT 100 35
        sbmC 1899630 .. 1899646 +  -2.9  -5.15969   GTCGTAGCGGTTTAC              CCCTGTT CCG GACAAGG              TTTTTTACATTCCCG  74 34
CTM43_RS09330 1900870 .. 1900882 +  -3.3  -3.67052   AAACATTGTCATCAG                CGGCT GCT AGCAG                TTATGTTAGCCCTAT  53 117
CTM43_RS09335 1901279 .. 1901305 + -15.8   -3.0806   GGCTAATCCCTGCCG         GTCCGGCGGCGT TAA GCGTCGCCGGGC         TGTTCCGCGTTTCCC 100 35
CTM43_RS09340 NONE
        cobT NONE
CTM43_RS09355 1905677 .. 1905692 +  -6.8  -2.62184   AAGCGCTGCTTCTGC              GCCTCGC TGC GCG-GGC              TGGTATAGACCCGCA  50 201
CTM43_RS09365 1907213 .. 1907235 +    -9  -3.29144   CAATCTTGCGCGCCG           CCTCGCCCTC CCC GCAGGCGAGG           TTATACCGGCCATCG  63 254
CTM43_RS09380 NONE
CTM43_RS09385 NONE
CTM43_RS09390 1911810 .. 1911835 + -16.3   -5.8901   ATTTTTATTCTCCCG         GGCGATTTCAG GATC CTGAAATCGCC          TTTTTTATTTTCTCT 100 59
CTM43_RS09395 NONE
CTM43_RS09400 1912952 .. 1912982 +  -7.5  -3.30124   CCCCGCATCAATATT      C-AGCGTCGGCGGT CCAT AGCGCCGACGCCAG       TTCTCCCAGCTAGGC  56 304
CTM43_RS09410 1914440 .. 1914467 +  -4.9  -3.40403   GGCCGCCGTCGGCGT       TCAG-CC-CAGGC ACGG GCCTGCGGGCTGG        TTATCCTGAAAGAGG  52 165
CTM43_RS09415 1915476 .. 1915507 + -10.8  -2.57132   CCCCTCGCAGGATAA      AACGCCGGGTTTCT CTGC GGAAACCCGGCGGA       ATTCTGCGCAAGAGA  72 172
CTM43_RS09420 1916514 .. 1916555 +  -5.7  -3.31461   CGCCGTTAATCCTTC GCGGCGGTGGCCTTCAACAG GTA CTGCTGC-GCCTGCTGCCGC TTCTGCGCATAGCTG  57 32
CTM43_RS09435 NONE
CTM43_RS09440 1918699 .. 1918710 +  -5.8  -2.80994   CACACCAACTGTGCC                GTCG CCAG CGAC                 TGTAATCACATTCGA  52 174
CTM43_RS09470 NONE
CTM43_RS09475 NONE
CTM43_RS09480 NONE
CTM43_RS09485 NONE
CTM43_RS09490 NONE
CTM43_RS09495 1937037 .. 1937064 +  -3.3  -4.24963   GTTGGCTTCCGACAA        CGGCG-GACAGG CGTAA CCCGTCACGCCA        TTTTACGTACTTATC  60 10
        clbH NONE
CTM43_RS09505 NONE
CTM43_RS09510 NONE
CTM43_RS09515 NONE
CTM43_RS09520 1959472 .. 1959492 +  -2.5   -2.8552   CGGATATCGGTGACA            GCGCC AATAAAGGTGC GGCGC            ATTTAATGAATAAGG  40 44
CTM43_RS09525 1960938 .. 1960951 +  -2.3  -2.62396   CCCAACACTTGGATA               TGGAG GTGG CACCA                TGATGTCGGGCAATC  39 9
CTM43_RS09530 NONE
CTM43_RS09535 NONE
CTM43_RS09540 NONE
CTM43_RS09545 NONE
CTM43_RS09550 NONE
CTM43_RS09555 1970923 .. 1970935 +  -4.8  -2.96695   AAAATCTATTGCCGC                GAGG CCTTT CCTC                TGATTTGGTACGAGC  49 163
CTM43_RS09730 NONE
CTM43_RS09735 NONE
CTM43_RS09740 NONE
CTM43_RS09745 2019790 .. 2019811 + -10.1  -2.90813   AAAGTCTATATAGAA           CCACCTCCT GTAG AGGTGGTGG            TAATTTGCCAGAGTG  71 165
CTM43_RS09765 2022659 .. 2022677 +  -7.4  -2.65264   TTCAGTATTACCAGA             GGGACAGT TTC ACTGTCGC             TAATGTAGGTGCTGG  56 109
CTM43_RS09770 2023736 .. 2023752 +  -3.1  -4.56367   TAATAGTGTGATGGC              TTTTAGA TAT TTTAAAA              TTTATTTATCGCCTG  65 167
CTM43_RS09785 2026101 .. 2026123 +   -12  -3.25823   GAAGAATGAATCGAA           GGCACCCG CATTTGT CGGGTGCC           TTCGTATGAAAGCGA  82 32
CTM43_RS09815 2032366 .. 2032380 +  -3.6  -3.90856   TGCAGCGGCAGTTAA               TGTTAT GTT ATAACG               TTTCATTACGCAATT  55 51
        dksA NONE
CTM43_RS09825 NONE
CTM43_RS09830 2034423 .. 2034435 +  -2.7  -3.25942   ATAACACCGTATTAT                TAACG ATT TGTTA                TTAATGTAGCAAAAT  45 66
CTM43_RS09835 2035509 .. 2035519 +  -5.4  -3.52482   TAATGACGATGCATT                 TCTG AAC CAGA                 TGTTATTGTGGTCTT  55 156
        thrS 2041830 .. 2041840 +  -2.4  -3.33696   ATGTTGCCAGCCACC                 GGAG GTT CACC                 TTGATTAAGCAAAGC  45 7
CTM43_RS09870 NONE
CTM43_RS09875 NONE
        hemB 2045108 .. 2045123 +  -7.6  -3.03159   TTAATCAACATAAAC              GGGAAT ATTG ATTCCC               TGTTGACAAAATTCC  60 15
CTM43_RS09885 NONE
CTM43_RS09890 2046979 .. 2046992 +  -4.5  -2.57344   AGGTGTGTGATGTCA               GGCTA TATC TGGCC                ATTATAGCCCGCGTA  46 172
CTM43_RS09895 2047622 .. 2047640 + -11.8  -2.62263   TAAAGCCAGAAAGTA             GATCTGCT ATC AGCAGATC             TACTATGAAAGGCGT  75 197
CTM43_RS09935 NONE
CTM43_RS09940 2057310 .. 2057327 + -11.3  -5.15526   AGCCAAATTTAAGAA             GCCTGCT TTCG AGCAGGC              TTTTTGCTTTTCTGT 100 36
CTM43_RS09955 2061462 .. 2061513 + -12.8  -3.14132   GGTTAACGACAGGAT CAGCATTGGCACCG-CGCCGAGCGC CAG GCGGATGGCGTCGGAGCCGGCGCTG TTAATCACGGCCAGA  84 302
CTM43_RS09975 2066116 .. 2066133 + -11.3  -4.81851   GCTGAAAAGCAAAAA             GCCTGCT CGAA AGCAGGC              TTTTTAAATTTGGCT 100 91
CTM43_RS09985 NONE
CTM43_RS09990 NONE
CTM43_RS09995 2069622 .. 2069639 + -11.3  -3.24245   CGTTGTTGGGAATAA             GGATCGG GAAA CCGATCC              TTAACTTATCAATAG  76 103
CTM43_RS10005 2071827 .. 2071852 + -19.1  -4.81851   CACGGAAAGCAAAAA         TCCCGCTCAGG TTTC CCTGAGCGGGA          TTTTTAAATTTGGCT 100 479
CTM43_RS10020 2073264 .. 2073280 + -10.8  -3.53811   CGGGAACATAAAAAA              GCCCGC TGAAC GCGGGC              TTTGACGGGGATCAG  79 270
CTM43_RS10035 NONE
CTM43_RS10040 NONE
CTM43_RS10045 NONE
CTM43_RS10050 2078259 .. 2078294 +  -3.8  -2.52464   TCACCGCTCAGCCAT    GAGGC-CGCCAGCAGGA CGA TCCCGGCGGCGAGCATC    TCGATTGCCCCCGCC  41 325
CTM43_RS10060 2079951 .. 2079970 +    -7  -3.23393   AGTAGCATGGCGAAA            CGCAGCGT AACG GCGCCGCG             TGTTCTACCCTGAAA  60 36
        yedQ 2081997 .. 2082018 + -14.5  -5.44119   CATTAGCAAGTTTGA           TCCCGACTC CTGC GAGTCGGGA            TTTTTTTCGCCTGCC 100 287
        dsrB 2082589 .. 2082607 + -11.7  -4.41616   TCTCGTAAAACTGAA             CTGGCGG GAGCG CCGCCAG             TTTGTTTCAGCGCAT  93 33
CTM43_RS10085 2084380 .. 2084394 +  -6.4  -3.05463   CTGACGGGCGTCGAT               CAGCTC GTG GAGTTG               TTCGATAACGGGCAT  52 361
CTM43_RS10095 2086593 .. 2086610 +  -8.4  -5.95539   ACAGCGGTGAAAAAA             GGCGCT CCTGGA AGCGCC              TTTTTTTATTTAGCG 100 44
CTM43_RS10100 NONE
CTM43_RS10105 NONE
        yecC 2089102 .. 2089133 + -14.4  -3.55071   TAAAGCATGGGCTGG      CGTGGCGGCT-CAGC TTC GCGGGAGCCGCCGCG      TTTAGCCCACTCTCG  93 38
        sdiA 2090359 .. 2090386 +  -3.4  -4.32067   AATCATCGCTTTCAG        GCAGGAGACTTCC TGC GCCAGT-TCCTGC        TTATTTTCTGCAGTG  64 255
        uvrY NONE
        uvrC 2093371 .. 2093390 +  -2.1  -3.32518   GTTGAAACATTAGGG            GCTCTGT AGCAAC ATAGGGC             TAATTTTTACTTACA  45 28
CTM43_RS10135 2093965 .. 2093977 +  -4.1  -3.65722   GCGCGGCGATTTGCT                TGATC AGT GATCG                TTTCGCCGTTATTTT  55 16
CTM43_RS10140 2094209 .. 2094228 +  -5.6   -3.1855   CGCTCCAGATTAACA            GCATCGGC AGTT GCGGGTGC             TTCAGTATTAAAGGC  52 34
CTM43_RS10145 NONE
CTM43_RS10150 2094459 .. 2094472 +  -8.1  -6.04953   AGCAGTGTCGTGAAA               CCACC TACG GGTGG                TTTTTTTGTTTCTGT 100 70
CTM43_RS10160 2095509 .. 2095528 +  -2.7  -2.90075   GTGGCGTCGGCGCTG            CGCGGCC TGGCCT GATCGCG             TATCGTTGACACCGG  42 11
CTM43_RS10165 2096295 .. 2096310 + -11.8  -5.24129   TAGCGAAATGAACAA              GGGGCC AGCA GGCCCC               TTTTTTATCCCACCG 100 30
CTM43_RS10175 2098038 .. 2098070 +  -6.9  -3.91897   TTTATCGATAAAGTA      CAGACCTTCGCCG CTTTTTC CAGCGAGGGTCAG      TTTATCGATCACCGA  66 106
CTM43_RS10190 2099535 .. 2099577 +    -9  -5.66338   CGCCAGATCGTCGCT TAACCGTCATCAGGGCCAGC GCC GCTGGCCCTTCCGTCGTTTA TTTTTTCTTCTATTT 100 23
CTM43_RS10200 2101416 .. 2101440 + -20.7  -4.12603   AACGCATTAATACCA          GGCCTCGCCGG ATA CCGGCGGGGCC          TTCTTCTTTAATGGG 100 31
CTM43_RS10210 2103562 .. 2103574 +  -4.7  -5.06451   CGGGATTGACGATCG                GCCAG CTG CCGGC                TTTTTTCAGGTAGTC  83 404
CTM43_RS10220 2104429 .. 2104442 +  -5.3  -5.43487   CCCGGTAAAATTGTA               TGACA ATTG TGTCA                TTTTTTATGTCATTT  87 394
CTM43_RS10225 2105628 .. 2105640 +  -9.1  -2.73364   AGCTGGCGAAAAAAG                GGCTG TAA CAGCC                TGATTAAACTGGCCC  63 18
CTM43_RS10230 NONE
        araH NONE
CTM43_RS10240 NONE
CTM43_RS10245 2110567 .. 2110586 + -12.2  -4.07568   CCTAGTTCAGGAAAA            GGGCTAAC CGGC GTTAGCCC             TTTTCAAGGGAAACC  95 36
CTM43_RS10255 NONE
CTM43_RS10260 2114127 .. 2114142 + -11.8  -3.54902   GCCGAATAAAACTAA              CCCGGC TTTC GCCGGG               TTGCTTGTTACATAC  83 64
CTM43_RS10270 2116698 .. 2116721 +  -5.8  -2.60212   ACGTAACAGTGTGAA          GCCGCGCGGC GTCT GCCGCGTGAA           ATTGTGACATGCTGC  51 35
        cutC 2117560 .. 2117584 +   -10  -5.72616   TGATTGCCCGTACCA          GGCCCCTG CCCATTAAA CAGGGGCC          TTTTTTTATCTCGCT 100 77
        aspS NONE
CTM43_RS10310 2123695 .. 2123713 +  -4.5  -4.61527   GAATTTGTAATTAAC            GC-CGCCT GAAA GGGCGCGC             TTTTTGGAGAGTTTT  71 17
CTM43_RS10315 NONE
        ruvC 2125038 .. 2125057 + -12.2  -5.67063   GATAATCGCAAATCA            GGCTGGAT ATCT ATCCAGCC             TTTTTTTATGATACC 100 36
        ruvA 2125694 .. 2125712 + -10.2  -3.32844   TGAAACGCTAATTCG             CGAAGCGC TGC GCGCTGCG             TTGTGAGGTAAGGGA  75 1
        ruvB 2126767 .. 2126790 + -13.9   -5.0925   GCAGTTTATGGTGAA          GCCCGGTCA GCAGCG TGACCGGGC           TTTTTCATTTTCAGC 100 55
        znuA NONE
        mepM 2130714 .. 2130735 + -15.1  -5.54907   ACCGGTCAGTGGAAA           GCCGGTGCC CCAG GGCGCCGGC            TTTTTCTTTTGTAGG 100 43
        msbB 2131794 .. 2131809 + -10.4   -5.4251   AAAGAAATAAAAAAA              GCCTCC GTCA GGAGGC               TTTTTTATCTCTACC 100 31
CTM43_RS10375 NONE
         zwf 2136178 .. 2136203 + -12.6  -5.80364   TTTTTAATCTTTTAA         GCCCCGTGAGG ATTCA CC-CACGGGGC         TTTTTTTATTACACT 100 106
         edd NONE
         eda 2138833 .. 2138857 + -13.6  -5.88197   CCTCCAGGTCAACAA         CCCGGTCTGCG GCAA CGC-GACCGGG          TTTTTTTGTCTTTAC 100 47
CTM43_RS10400 NONE
CTM43_RS10405 2141396 .. 2141424 + -10.3     -2.59   TTATAGACACGTCAT        CATTCAGGCGCCA CCC TGCGGCCTGAATG        CTCTTGTGTCACGAT  69 83
CTM43_RS10410 2143807 .. 2143825 +  -4.6  -4.03413   GTCCCGGCGGCGTAG             TCACGT TCAGCTT ACGTGA             TTTATATAACCCCAT  62 313
        yobA NONE
CTM43_RS10430 NONE
CTM43_RS10435 2146244 .. 2146272 + -13.8  -5.08824   ATAACATCAAAAAAA        CCGCCCTTGCCG GACAA CGGCAGTGGCGG        TTTTTTCGCTGGCAG 100 63
CTM43_RS10450 2149368 .. 2149383 +  -5.4  -4.31692   TCTATTTCGAACGCG              CCGATG CGGA CATTGG               TTTTACTCATCGCTT  69 525
CTM43_RS10480 2155632 .. 2155646 +  -5.6  -3.08312   ATAATGTCGCCTGTT               CATGCC TGC GGCTTG               TTGGCTACGTCCGTT  51 77
        proQ NONE
CTM43_RS10490 2158432 .. 2158453 +   -13  -5.93809   CAAATAAGTTGCTAA           CGGGCACC CTGAGA GGTGCCCG            TTTTTTTTGTGCGCG 100 34
        htpX 2159571 .. 2159592 + -11.6  -5.78622   CGCTGAAAACGACAA           TCCGCAGC CCGCAA GCTGCGGA            TTTTTTTTACCGTCC 100 53
        kdgR 2161966 .. 2161998 + -15.5  -3.18728   CGGCGGATAACGGGG      TTGGCGACCGCGGCG CTA CGTCGCGATCGCCGG      TTCGATGTTAGCCGT 100 43
        mgrB NONE
CTM43_RS10525 NONE
CTM43_RS10530 2163068 .. 2163078 +  -5.4  -4.46828   TATTGTTGGGTAACG                 TGAC ACT GTCA                 TCTTTTTTTCATTAT  69 28
CTM43_RS10540 NONE
CTM43_RS10545 2163890 .. 2163921 + -10.2  -5.06414   AGACCACTCTTCTTG      TATAAAAGCCTCGC CTGC GCGGGGCTTTTGCA       TTTTTATTGCAAAGC 100 45
        ftsI 2165820 .. 2165845 +  -8.3  -3.53012   AACAGTGGTCTGCAG         GGGCGAATAGCG CTA CACT-TTCGCCC         TTTCAGCAACACCGG  69 39
CTM43_RS10555 2166723 .. 2166737 +  -7.8  -2.90496   AATCAGCACGATACC               GCCGAG AAT TTCGGC               TCGTTTGCCCAGCAG  56 86
CTM43_RS10585 2172879 .. 2172903 + -22.9  -3.92001   AGAGTAATCGCCAGG          CTCGCCGGCCG CTG CGGCCGGCGAG          TTATTCTGTCGTCTC 100 34
CTM43_RS10610 2178669 .. 2178680 +  -7.2  -2.78935   CGGCATCGAGATTTG                CCGG CACG CCGG                 TGTAGTACAGGGTCT  51 286
CTM43_RS10620 2180869 .. 2180882 +  -5.2  -3.53811   CTTCGGGCGGCATGG               CGGC GGGTTG GCCG                TTTGCCGGAAATCAG  56 99
        tsaB NONE
CTM43_RS10630 2182277 .. 2182309 + -19.4   -4.1899   TTGTTTATGTTAGTT      CAAAGAAACAGCGG CCGGT CCGCTGTTTCTTTG      TTTTCAGTCGAATAA 100 46
        fadD 2184168 .. 2184184 + -15.1  -5.24129   GAATGAGTCGCCTGA              CGCCGGC TAC GCCGGCG              TTTTTTATGGGCGCA 100 46
CTM43_RS10640 2185374 .. 2185396 + -12.6  -5.76949   CAGAGCATTAAAAAA           CCGGCGGCGC GTG GCGTAGCCGG           TTTTTTTTCGCGATA 100 55
CTM43_RS10660 NONE
CTM43_RS10665 2188305 .. 2188317 +  -5.5  -3.37685   GCGCTCACTACCCGC                GTGCT GTA AGCGC                TATTTGCCGCCTTTT  54 17
CTM43_RS10670 2189315 .. 2189328 +  -9.5  -4.00124   GAGGCATAAAAAAAA               CGCCC CGCA GGGCG                TTTCATTGTGGGCTG  81 486
        fadR 2192566 .. 2192582 + -15.1  -4.70107   CGATATACAGAACAA              GGGGGCC AAT GGCCCCC              TTTGTTATTTTACTC 100 57
CTM43_RS10700 NONE
         alr 2196849 .. 2196870 + -13.7  -3.01712   CCCTGTAACCTATTC           CGGGGCGGA TCAC TCCGCCTCG            TCTTCCGCGACCCGC  86 33
CTM43_RS10720 2200514 .. 2200524 +  -2.4  -3.42069   GCCGGAAATATACTC                 GCGG TCG CCGA                 TATTGTTGGCGTTAA  46 154
CTM43_RS10735 NONE
CTM43_RS10740 NONE
CTM43_RS10745 NONE
CTM43_RS10750 NONE
CTM43_RS10755 2209171 .. 2209203 + -14.9  -4.55128   TTAAGCGGCTCTCAG      AGCCTGGGTTCGGTA CTC TACCGGACTCAGGCC      TTTTAATTTCAGGCT 100 330
CTM43_RS10765 NONE
CTM43_RS10770 2212963 .. 2212977 +  -3.5  -3.46107   TTGTCGTTAAATAAT               GGCGT TTATT ACGTC               TGCTTTTTATTCTTT  50 455
        tdcA 2214303 .. 2214315 +  -3.4  -3.37881   CTGTTATCAGCAGGA                TGAC GCCCG GTCA                TTGACTTTATATTAA  48 76
        tdcB NONE
        tdcC NONE
CTM43_RS10800 NONE
        pflB 2220267 .. 2220293 + -14.5  -3.52341   GTGGCCACCGGGCCA         CAGGAGAGCCT TTAAT GGGCTCTCCTG         TTATCATCTTCACAT  93 41
CTM43_RS10810 2221813 .. 2221825 +  -5.5  -4.27584   TTGGCCACGACCTGA                GGACG CTC TGTCC                TTTTGACTTGCGAAT  66 41
CTM43_RS10815 2222816 .. 2222827 +  -2.2  -3.92641   CCGCTGGTGGCCAAG                GTCT AAGG AGGC                 TTTATGGGTGAAATT  52 20
        livM NONE
CTM43_RS10825 NONE
CTM43_RS10830 2226205 .. 2226215 +  -6.8  -3.21912   TCAGGTTAAATACGG                 CGTC GTT GACG                 TTAATCGATTCAACA  56 525
        pckA 2228532 .. 2228579 + -16.2  -3.72576   GCGGTCGAAGCCTGA TCCGC-GGCCAGCAGGTCGACGC CTG GCGCCGACCTGCTGGCGAGCCGC TTTACTCCGCAAAGG 100 26
CTM43_RS10850 2230296 .. 2230308 +  -4.8   -4.0825   AATGCATTAGTGGAT                GCGT TTATT ACGC                TTATTTCGTTCCCGG  62 239
CTM43_RS10855 NONE
CTM43_RS10860 2232680 .. 2232703 +  -2.2  -3.56568   CCGCTTCCACCATCC          CCAGCATCGT GGTG ACGTGGCGGG           TTTCGCAGATACTTG  47 203
CTM43_RS10875 2235269 .. 2235281 +  -2.6  -5.92399   TAAGCTGTTTATCAC                GCTC CAGCT GGGC                TTTTTTATTTTCTTC  95 437
CTM43_RS10890 2236308 .. 2236319 +  -2.2  -3.64703   ACTCTCGCGGGCAGG                GGAG ATAT TTCC                 TTTCCCTGAAGCGGC  51 135
        tssK NONE
CTM43_RS10905 NONE
CTM43_RS10910 2240526 .. 2240537 +  -5.8  -2.68305   TTAAACAAAATTAAA                CAGG GCGT CCTG                 TGAATTGATTTTTGA  51 425
        vgrG 2243285 .. 2243309 +  -8.5  -3.21747   CTTATGTCACTAACA          GCGAATCCTCC GGA GGGGGAATTGC          TTAATGATAAAATGA  64 383
CTM43_RS10925 2246276 .. 2246290 +  -2.8  -3.09834   ACGGGGACAATGACT               GCCT GATGCAA AGGC               TTAGGTGATAAGATG  45 182
CTM43_RS10930 2247295 .. 2247313 +  -7.5  -3.28712   AGTAGTGAAATTATT             TCATCGT CATCA ACGATGA             TTGTCAACGGAAAAG  62 124
CTM43_RS10935 2247766 .. 2247778 +  -2.7  -2.93891   AAACAAAACCAACGA                TTACT GTT AGTGA                TGATATTTTCAGGCT  43 118
CTM43_RS10940 NONE
CTM43_RS10945 NONE
CTM43_RS10950 NONE
CTM43_RS10955 2253324 .. 2253338 + -11.4  -2.93382   CAACTAATCTGATCG               CGCAGC CAT GCTGCG               TGTCTCCCTGTAGAC  78 110
        tssG NONE
        tssJ NONE
        tssE NONE
CTM43_RS10980 2258504 .. 2258516 +  -3.4  -2.63102   CAATATTGCAAGAAC                CGAA CGCCC TTCG                TAGTCTGAAAATGAT  42 71
CTM43_RS10985 NONE
CTM43_RS10990 2259932 .. 2259949 + -11.3  -5.41143   CTGGGTAAAAAAAAA             TCCACGC CGCT GCGTGGA              TTTTTTTGCGCGGTG 100 49
CTM43_RS11005 2262347 .. 2262374 + -12.7  -4.64844   CCGTAGCATGATTTC        CCGCATCGGCC GCTGAA GGCCGATGCGC         TTTTCTGTGTCTCAC 100 41
CTM43_RS11010 2264058 .. 2264093 +  -4.6  -3.87994   CAGCATCACCACGAT    GTCGTCCTTCGGC-GCG TGG CGCAGCAGATTGATGAC    TTTATGCGCCTCGCT  59 485
CTM43_RS11035 NONE
        prfA NONE
        prmC 2271490 .. 2271510 +  -2.6   -2.8655   ACATGGAGAATGTTG           GCTGATGAA CTTA TTCA-CGGC            TGTCCTCTACCTGCA  42 21
CTM43_RS11050 NONE
CTM43_RS11055 NONE
CTM43_RS11060 2273619 .. 2273644 + -13.3  -5.40072   TGCATCAGTAAAAAA         GCCTGCCGG CGTCAAAA CCGGCAGGC          TTTTTTTCGCCCGGA 100 48
        chaB 2275303 .. 2275315 +  -9.1  -2.71745   CGCATTTTCGCTTGC                CAGCG CCC CGCTG                ATTGCTTATTGAAAG  63 51
CTM43_RS11075 2276270 .. 2276296 + -15.1  -3.31144   AGGTTTGTCATGAAT         CTCACGCCCGG CATGA CCGGGCGTGTG         TTCTGGCAGTGACGG 100 201
CTM43_RS11090 2278578 .. 2278609 + -10.8  -6.07627   TGTCCGTGGATAAAG      GCGTCCTGCAGTGT GTAT GCACTGTCGGGCGC       TTTTTTTTTGCGCAT 100 209
CTM43_RS11095 NONE
        ntrB NONE
CTM43_RS11105 NONE
        nirD NONE
CTM43_RS11115 2288277 .. 2288304 +  -9.9  -3.72453   CGCGCAGCGACGCCT        CCGGTTGGG CGGCACCTTA CCCAACCGG         TTTCAGCTTATTCCT  76 47
CTM43_RS11120 2290007 .. 2290033 +  -5.1  -3.28984   AGGTGGCGCGGTTGG        CGCGCAG-GCTGG CGG CCAGCACCG-GCG        TTAATGCTTCGCTTA  49 243
CTM43_RS11135 2293955 .. 2293977 + -11.3  -5.03145   GTTGGCGTATAAAAA          GGCGCGCTCC CCAC GGAG-GCGCC           TTTTTTAACCGCTTA 100 55
CTM43_RS11140 NONE
        narH NONE
        narJ NONE
        narI 2301013 .. 2301028 + -11.8  -5.75342   GCGACTGCTCACTGA              CCCCGC CGCG GCGGGG               TTTTTTTTCGCCCCA 100 48
CTM43_RS11165 2302775 .. 2302791 + -12.3  -3.55368   CCTCGCCCTTCGGGC              CGTTGCC TGC GGCAACG              TTCTCTCGCTTCGCT  77 366
        rssA NONE
        rssB NONE
        galU 2308192 .. 2308216 + -13.6  -5.71712   GGTTGAAAGTACAAA         CCGGGAG-CGC ATCT GCGACTCCCGG          TTTTTTTATATCGGC 100 48
CTM43_RS11230 2309895 .. 2309910 + -11.8  -4.85129   TCAGAAGCTCGTACA              GGCGCC TGTG GGCGCC               TTTTTAATGTCTGCT 100 46
CTM43_RS11240 2312967 .. 2312985 +  -3.8  -2.78715   TTCAGCTGGCTGCTT             TTTGACCG GTT CGATCAAG             TGTGATGGGAGGGTT  45 2
CTM43_RS11245 2313826 .. 2313864 +  -8.9  -3.61517   TGCTGAGTTAGTTCG  TCGCCAGCAGGCGGGGAGT CTC GCTTCACGCCTGC-G-CGA  TTATTAGCAAAACCT  71 30
        oppA 2316202 .. 2316230 +    -6  -3.34652   ACATTAATGGCAATA       CG-TGGAGCGGGT CTCG GTTCGCTCCATCG        TGTCTTATTTGAGAG  57 34
        oppB NONE
        oppC NONE
CTM43_RS11265 NONE
CTM43_RS11270 2320156 .. 2320173 + -11.3  -5.75945   CGTTATAATCTCAGG             GGCTGAC GCAG GTCAGCC              TTTTTTTTGCGAGGT 100 33
CTM43_RS11275 2321048 .. 2321072 + -13.6  -4.76644   GGCGACGTAAAAAAA         GCCTGCCG-GG AGTA CCGCGGCAGGC          TTTTTACTGGATGTT 100 44
CTM43_RS11290 2323241 .. 2323273 + -10.6  -4.61199   GACAGCTAAGCGAGC     AGGCAAACGGCACCG TACG CGGTGCCGTT-GTCG      TTTTCTCTCTGCGCT 100 32
CTM43_RS11300 2324808 .. 2324827 +  -3.6  -4.41844   GTATTAGTAATTCAC            TATC-ACGC GTG GCGTCGATG            TTTTGTCAGCATTTT  63 73
        tonB 2326309 .. 2326341 +  -8.5  -3.92832   ATTAACTGATAAAAC     GCT--GCGGCGGACC GGCAA GGTCCGCCGTGAAGC     TTGTTTAACGCATTT  73 32
CTM43_RS11330 2329757 .. 2329779 + -16.3  -3.81408   TAAGATGTAATATTT           CAGGCCGGG TTTTC CCCGGCCTG           TTCGTTTTGGTTTTA 100 31
CTM43_RS11335 2330551 .. 2330577 +  -8.6   -3.6422   GCAGGCGGCTGCAGG         GGGGAGCGATCG TTC CGGTCGTGCTCC         TATTTTCGCAGAGTG  71 320
        thrS NONE
CTM43_RS11345 2333181 .. 2333202 + -10.1   -4.6971   CATCAAGAAACATTT           CCGGTGGGC TTCG GCTCACTGG            TTTTGTTCGCCTTTG 100 44
CTM43_RS11350 2333456 .. 2333468 +  -4.9  -5.15969   CCGTACGCATAAGTC                GTTAA CGT TTAAC                TTTTTTAACTTAGAA  80 29
CTM43_RS11355 2333871 .. 2333889 + -10.3  -4.54727   ATAAGCCAGTTGAAA             GAGGGAG CTTGT CTCCCTC             TTTTCGTTTCAACAC 100 37
CTM43_RS11370 NONE
CTM43_RS11375 NONE
        ihfA 2337868 .. 2337894 + -13.8  -4.56961   ATAATCTGCACTAAT         TAAAAAGGCCGC ATT GCGGCCTTTTTC         TTTTCTGTCCATCTT 100 37
CTM43_RS11400 2342199 .. 2342233 + -12.8  -3.79519   GGTGTGACGAACGAC     CGCAGACGCGGAGGAG ATT TTCCTTCGCGTCGACG     TTTGGTCGTGAGGTT  93 34
        btuC 2343334 .. 2343345 +  -5.8  -3.74693   GACGGCGCCGGTTCA                GGCT TACC AGCC                 TTTGATCGCGTCGCC  61 59
CTM43_RS11415 NONE
        btuD NONE
CTM43_RS11425 2346237 .. 2346254 + -11.3    -5.252   CATTCAGAAGCAAGA             GGGAAGC GAAC GCTTCCC              TTTTTTATGCCGATA 100 44
CTM43_RS11430 2347782 .. 2347802 + -15.4  -2.63723   CGAGCTAACTTGCCT            CGCCCCGC GTTCA GCGGGGCG            CTTACTTGGTCAGAA  95 33
CTM43_RS11450 2352912 .. 2352933 + -15.9  -5.76949   CCCTGACAGGACCGA           TCCCCGGCA GCGA TGCCGGGGA            TTTTTTTTACCGGTG 100 46
CTM43_RS11465 NONE
CTM43_RS11470 2358080 .. 2358098 + -11.7  -5.44721   TATAAGCCGCATGGC             GGGAGGC GAATA GCCTCCC             TTTTTTTAAGGTAAT 100 36
CTM43_RS11475 2358558 .. 2358578 + -14.7   -5.5112   AATAAGTACATAAAA            GCTGCCGCG ATA TGCGGCAGC            TTTTTTATTGCTGAC 100 61
CTM43_RS11485 2359312 .. 2359338 +  -9.5  -3.29324   TCGGCCACCGCCTGG         AGCAACATGAG GATGG CTCATGTTGCA         TTGAATTTAAGTCGC  73 63
CTM43_RS11490 NONE
CTM43_RS11495 2361601 .. 2361627 + -10.2  -2.73875   ATCGTCGGTTCACTT        C-CAGAGCGGG CTGTTA CCCGCTCTGCG         TCATGTTGCCGCCAG  69 81
CTM43_RS11525 2367845 .. 2367879 +  -8.7  -2.82742   AGCGGATCGCAAACC     GGGGCGTTATTGTGA CCAAA TCATAATAACGTCAC     TCGTTGTCAAACGAT  62 49
CTM43_RS11530 2368536 .. 2368559 +  -4.6  -2.62983   CTCTCCCCCTGATTG          GTGACTATTG ACTT TATTAGTCAC           TAGTCTGAGAATGCG  46 29
CTM43_RS11535 2369698 .. 2369726 +  -6.6  -4.39166   ACGCGAGCATAATGC       CGCCGGGAGC-CA GCCA TGAGCGCCGGGCG        TTTTAATCTCTCCGC  74 7
CTM43_RS11540 2372884 .. 2372897 +  -8.1  -3.20307   GTAAGGATACCGGCA               CCGCA TGAG TGCGG                TATTGATCCTGTTCG  62 104
CTM43_RS11560 2375902 .. 2375932 +    -3  -4.24397   TTTTTTCTAGCGTAT       GGCCGGGGTTGCGC CCC GCGCTGGCATGGTC       TTTCTGTTACGTTGT  59 169
        sufA NONE
        sufB NONE
        sufC NONE
        sufD 2380102 .. 2380113 +  -5.8  -2.66481   GTATTGGACAGCGTT                TGCC GGGA GGCA                 TAGTATGACATTTTC  51 6
CTM43_RS11585 NONE
        sufE 2381794 .. 2381822 +  -8.1  -3.14468   GATTTCATTCTGTTA       CGTCCGGCAGGG CGCTGA CCCTGCCGC-CG        TTCAGTCTCCTGGCG  62 53
CTM43_RS11595 2382877 .. 2382895 + -14.6  -5.06414   TGAGGGCAAAAAAAA             TGGCGCAC AGA GTGCGCCA             TTTTTATTACCAGAA 100 50
CTM43_RS11610 NONE
        fumD 2385874 .. 2385885 +  -2.2  -4.59853   GATTCAGCGGCTTCA                GTTC ACCC GAGC                 TTTTTAACCACTTGC  66 306
CTM43_RS11625 2388232 .. 2388247 +    -4  -3.41878   GCAGTATTGTTAGCC              TGAATC AAAT GGTTCA               TTATGCGTTAAACAC  50 28
CTM43_RS11630 NONE
CTM43_RS11635 2390488 .. 2390515 + -12.2  -3.88787   TGACGCGACGGCAAA        CCGGGTAATATA GCGC TATATTATCCGG         TTTATAGCGATATCC  91 38
CTM43_RS11640 2391321 .. 2391356 +  -3.9  -3.66999   CGGCATGGTGGATCA    GGCGT-ACCGGCAGGC CGTAC GCTTGCCGGAGATGCG    TTTCGCTCAGTACGT  54 71
CTM43_RS11665 2396800 .. 2396816 +  -3.6  -3.40558   CGCAGAAGAGAAGGT              GGCCTG ATATG CATGCC              TATTTGCACTGTCTC  48 19
CTM43_RS11670 NONE
CTM43_RS11675 NONE
CTM43_RS11680 NONE
CTM43_RS11685 NONE
        dmpG NONE
        mhpT 2402694 .. 2402729 +  -6.7  -3.12668   ATGGTCTGATATGCA    TCCGGCGGTCTGGTA AAAAAA TGCCGGGCCGCCGCC     TTGCCTGTCCGCGTC  57 32
CTM43_RS11700 2403937 .. 2403947 +  -2.4  -3.65201   GTAAAATCGAGCACC                 ACCG TAC CGGG                 TTCTTCCAGCTGTTG  51 447
CTM43_RS11715 2406733 .. 2406752 +  -4.4  -3.08438   AGCACTATGTATTTT            TGTTTAAT GCTA ATTAAGCA             TATTAAGATATGATA  47 42
CTM43_RS11720 NONE
CTM43_RS11725 NONE
CTM43_RS11730 NONE
CTM43_RS11735 NONE
CTM43_RS11740 NONE
CTM43_RS11745 2412905 .. 2412938 + -10.1  -3.90762   CGGCGCAAGCGCAGC     GCCGCCCGGCAATGG GCAT CCGGTGCCAGGCGCC      TGTTTTTGCCCGGTG  82 91
CTM43_RS11755 NONE
CTM43_RS11760 NONE
CTM43_RS11765 2418709 .. 2418725 +  -6.5  -2.71712   TCGTTGTCTTGCTCT              GGCGTCG CCG TGATGCC              CTTTAACCAGGAAGG  53 3
CTM43_RS11770 NONE
CTM43_RS11775 2420614 .. 2420628 +  -4.2  -3.12668   AAGATAATTCACCAG               CGGGAA GGT TTCCGG               TTGCATATAAAAGTG  48 42
CTM43_RS11780 2421476 .. 2421503 + -14.2  -5.00616   ACCTTTTTCAGTGAC        CACGGCTATCGC CCAG GCGATAGCCGTA         TTTTTTAGGGAAGGA 100 44
CTM43_RS11785 NONE
CTM43_RS11790 2423218 .. 2423234 +  -8.7  -2.69601   ACGCCAAAAATCATG              GTCCGTT AAT GACGGAC              TCGGTTTCGTATGGG  61 249
CTM43_RS11795 2423897 .. 2423919 +    -7   -5.5112   TTGCCGGGAAGATAA          GCC-GCAGC GCTTGA GCTGCTGGC           TTTTTTATTCCTCGG  93 42
CTM43_RS11820 2429490 .. 2429509 +  -6.4  -3.85539   TGAGGTCAGACGTCG            GCAGCGGCT TTC AGTCGC-GC            TTTCATGTCGCTGTA  66 78
CTM43_RS11835 NONE
CTM43_RS11840 2434358 .. 2434376 + -14.6  -3.01712   AAATAATCCTCCCCT             GGGGCATC GCC GATGCCCC             TATTCACACCCGGCG  91 35
CTM43_RS11845 NONE
CTM43_RS11850 2437702 .. 2437720 +  -3.2  -5.02074   AATAGATACAAGATA             GTTAACAA CGG TTATTAAC             TTTTTTAACAGCTCA  75 473
CTM43_RS11860 NONE
CTM43_RS11865 NONE
CTM43_RS11870 2442034 .. 2442063 + -15.7  -2.70932   CGGACAGTAATCGTC       AGGGTTGCGTCGC CCGC GCGGCGCAACCCA        TACTTAGCGACGACG  95 31
        ccmA NONE
        ccmB NONE
CTM43_RS11885 NONE
        ccmD NONE
CTM43_RS11895 NONE
CTM43_RS11900 NONE
CTM43_RS11905 NONE
CTM43_RS11910 NONE
        ccmI 2448916 .. 2448945 +  -5.7  -3.86897   GGTGGAGACTATTAT       CGGTTTCCTGG TTCTCAGC CCGGGAAAGCG        TTTCTCACGCGTGAC  64 297
CTM43_RS11920 2450108 .. 2450153 + -21.4  -3.37939   GGCCTTGCTGTTCTT TTGCACTGAAGATCCGCTCT TCGTTC AGAGCGGATCTACAGTGCAG TTAACTTTTCCGATT 100 67
CTM43_RS11925 2451447 .. 2451463 +  -8.1  -3.74693   GTCCTTGGTCCTGAA              CGATAAT AAA ATTATCG              TTTCCTGCAATACCA  66 234
CTM43_RS11940 2453666 .. 2453685 +  -4.4  -2.80935   ATGTATAAGAATGGT            TTGATATT ATGC AATGTCAA             TATGATACATAACCT  45 22
CTM43_RS11950 NONE
CTM43_RS11955 2457924 .. 2457934 +  -8.2  -2.69977   ATAGACCGGGGAATA                 GCCG GAA CGGC                 TAATCTCTGCCCTGT  61 12
CTM43_RS11960 2458624 .. 2458634 +  -4.6  -3.15249   CGCGCCGTGCCAGAA                 GCGG ATC TCGC                 TTACTGCCAGGTATC  50 100
CTM43_RS11985 2464066 .. 2464101 +  -7.5  -4.56597   CAGCGCCATTTCGCC    CAGCTGCTGCGGGGTG ACAAA CTCCCCGGAG-GGCTG    TTTTTCCGCCAGCAG  79 135
CTM43_RS12020 2470752 .. 2470767 + -11.8   -3.5764   GGGCGTCAAAAAAAA              CCGGCC TGCT GGCCGG               TTTGACAATCAGATT  83 46
CTM43_RS12030 2472125 .. 2472164 +   -20  -3.88498   ATTAACGCCACTCAC  ACGTCAGGCGGGCAGCAG GGGG CTGCTGCCCGGCTGGCGA   TTTCCTCTCTCCCCA 100 36
CTM43_RS12045 2474382 .. 2474420 +   -16  -2.76046   CGCGGCGAAGCCCGG   CCCGGCGATCTGACGC AGAAGAG GGGCCAGATCGCCGGG   TAATATTGCGATTCG 100 45
CTM43_RS12050 2475744 .. 2475770 +  -5.8  -4.86862   CATCCCGCGCTTAGC        GCCTGGCCTGC CGCTGC GCAGGCC-GTC         TTTTGCTTTTTTCAG  81 27
CTM43_RS12055 NONE
        chrA 2478247 .. 2478260 +  -9.5  -3.27994   GGCTTTCGCGGGTGG               CCCGC GTCA GCGGG                TTGCTGTCGAGTTCC  66 106
CTM43_RS12110 2487046 .. 2487062 + -12.3  -4.34488   AAAATCATTCATTAG              CGCACCA TTA TGGTGCG              TTTCTTGTGGGTATG  95 58
CTM43_RS12115 2488298 .. 2488308 +  -2.4   -2.7062   CAGGTTAAACCCTGA                 GGAG CGA CGCC                 ATGTTATTAATTATT  39 26
CTM43_RS12120 2489710 .. 2489722 +  -9.1  -3.68351   GTCCGTACCCTCCAA                CAGCG CGC CGCTG                TTTAACTGATAACAG  74 8
CTM43_RS12125 2490748 .. 2490759 +  -3.6  -3.01712   GGTAAACGTACCGGC                GCGG GTCA CTGC                 TGTTCAGGAGCGGCA  45 36
CTM43_RS12145 NONE
CTM43_RS12150 2496757 .. 2496808 +  -7.4  -4.07568   GATGATTGATGATGC GCACCTGCCGCCGGCTTTCGCTGGCC GGGC GGC-AG-GATATCCGGCG-CAGG-GC TTTTCAGAGGGAAGG  71 32
CTM43_RS12160 2499423 .. 2499447 + -12.1  -3.65135   CCCGGCAACCGCCTT          TCCCGGTCTGC TCA GCGAACCGGGA          TTGTCATTGTTTCGC  88 70
CTM43_RS12165 2500097 .. 2500108 +  -3.6  -3.58343   ATTCGTCCGTACAGG                CGGT CATG GCCG                 TTTCCAGCTCATCAA  51 301
CTM43_RS12215 2509463 .. 2509478 +  -3.2  -3.11936   GGCGGTAAAAATTGA              GGCG AACACCAG CGCC               GTTTTGGGATTGCTG  43 261
CTM43_RS12225 2511014 .. 2511031 + -10.5  -3.54459   AGGGGAAAAACTAAA             GCGCCGT CCAG GCGGCGC              TTTAGGAAACGTTCA  77 293
CTM43_RS12255 2515617 .. 2515630 +  -9.5  -2.60496   GAGACATTTAGCGCC               GCCCG CTGG CGGGC                ATATTTGCCCGGCGA  60 56
CTM43_RS12265 2517654 .. 2517676 +  -9.1  -4.88786   AATCTTAAAAAGTTA           GTCTGGCCC GGTCG GGGCTGGAC           TTTCTTTATTTTACT 100 319
CTM43_RS12270 NONE
CTM43_RS12275 NONE
CTM43_RS12280 2519132 .. 2519145 +  -4.5  -3.91911   CAACTGAGCTACAGA               CGCAT TATG GTGCG                TTTAATTGGACTCGA  59 286
CTM43_RS12300 2520225 .. 2520244 +   -15  -3.92522   TCCTCCTGAAAAAAA            CCGGCGCT GTTC AGCGCCGG             TTTATCACCTTAACG 100 121
CTM43_RS12315 2523029 .. 2523050 +   -13  -2.72371   AAGCCTGAAAAAAAA           TCCCCCGC CGATAA GCGGGGGA            GTGTTATTTAACGGG  81 33
CTM43_RS12330 2527016 .. 2527044 +  -9.6  -2.78438   ATGATATCGCCGCCG       CAGAAG-ACCGCC GTCG GGCGGTGCTGCTG        GTTTAGGATCTGCTG  68 244
        ynhF 2528193 .. 2528210 +  -2.1  -3.99779   CATTATTATCAATTC             TG-CAAAA ATC TTTTGTCA             TTTCGTTCACTTTTG  55 84
CTM43_RS12345 2529497 .. 2529522 + -11.1  -4.17701   AAGGGCAAAAAAAAA         CCACAGCCGGGG AGA CCCCG-CTGCGG         TTTGTCGTTTATGCC  87 54
CTM43_RS12355 2531234 .. 2531259 + -11.1  -2.70979   GCAGTTCATCACGAT         CCACCGGACGCG CAT CGCG-CAGGTGG         TACATTTCGTTGGCC  66 192
CTM43_RS12365 2532603 .. 2532621 + -13.2  -5.64274   GCCATCAGTAAAAAA             GCGACTTC CTG GAAGTCGC             TTTTTTTATCACTCC 100 46
CTM43_RS12390 NONE
CTM43_RS12395 2536990 .. 2537043 +  -5.4  -3.21593   GTAACGGGCATTTCC CCTCCGGAAAGGC-GT-TCCTGGTTTA CAC TTAACAGGGAGACAGCCAT-CCGGAGG TGTTATGCAACGATG  52 37
CTM43_RS12400 2537589 .. 2537601 +  -6.2  -3.04144   TTCGCCAATTGTGCC                GGCC ACCGG GGCC                TGTTCCAGCTGCGAC  52 45
        slyA 2541351 .. 2541370 + -12.8  -5.03314   AGATTAATTCTTTGC            GGCCCGGG CTAA TCCGGGCC             TTTTTTCACCCTCCC 100 34
CTM43_RS12435 NONE
CTM43_RS12440 2545248 .. 2545269 +  -4.3  -3.37056   TGAGATTTCTGTCCG           GGGGGCG CACAATAA CGCCACC            TTATGACTACATCCT  50 38
CTM43_RS12445 2545971 .. 2545995 + -13.5  -4.43576   AAATTAGTTATCGAA          GCGCTGGCGCT GAA AGGGCCGGCGC          TTTATTCTATGTACT 100 47
CTM43_RS12450 2547362 .. 2547381 +   -15  -5.61881   AAAAAAATACTGCCA            GGGCGTGG GAAA CCACGCCC             TTTTTCTTTTTAGGG 100 39
        pdxY 2548273 .. 2548311 + -14.4  -3.11023   CACCCGGCTGTAACT   CCCAGGGCCTGCCCGACG GTC CGCCGGGCAGGTTCAGGC   CTTATTTTAAGCCTT  90 28
CTM43_RS12470 2551433 .. 2551455 + -12.7  -3.06815   TTTACGGCCCACGCC           GGGCAGCGC CTCCA GCGCTGCTC           TGTCTTCCGGCACCT  76 476
CTM43_RS12530 2561463 .. 2561489 + -13.6  -2.60714   GCCTGGTCTGAGGAG         GAGCCCGGCAGC ACG GCTGCCGGGCCG         GTTATCAGCCTTTGG  84 30
CTM43_RS12545 2564519 .. 2564537 +  -3.9  -3.19966   GCGTGCCGCTAAAGG            GTCATGGA ACAA TCC-TGAC             GTGTTTTTTTGCGAA  48 79
CTM43_RS12550 2564896 .. 2564909 +  -2.3  -3.85817   GGAGTCTCGCTTAGC               CGCTG GCCT CAGGG                TTTATCCAGCAGGCT  52 27
CTM43_RS12560 2566076 .. 2566093 + -12.7  -6.15259   TCTTTCACTTCCTGA             CCCCGTC CCGC GACGGGG              TTTTTTTTTGCCTTC 100 48
CTM43_RS12565 NONE
CTM43_RS12570 2567615 .. 2567630 + -11.8  -4.64844   GTCACCCATAAAAAA              GGGCCC GGAT GGGCCC               TTTTGTGTATGTCGA 100 63
CTM43_RS12595 NONE
CTM43_RS12600 2575925 .. 2575946 + -15.9  -2.70022   CCATAATGCGCAACT           GTCGCCACC GACC GGTGGCGAC            GTTATCTCACATGAC 100 44
CTM43_RS12610 NONE
CTM43_RS12615 2579790 .. 2579803 +  -2.3  -3.04398   TGCGGGTGATGTGCT               GCTGG CCGT CAAGC                GTTTTCGGGCCGCGC  41 49
        tehA NONE
        tehB 2582423 .. 2582438 +  -2.4  -2.70932   CTTCGCCACCCTGTT              GGCGCG CAAG CCTGCC               TGATTCGCCGCGGCG  39 7
CTM43_RS12635 2583376 .. 2583401 + -20.5  -4.64676   TCAGCGTTAATCGTG         CCAGCGCCGTC TGAC GACGGCGCTGG          TTTTCTTCAGCCTCC 100 31
CTM43_RS12645 2585801 .. 2585826 +    -4  -3.28924   CGGTATAGCCTGATG         C-CTGCAGGGT GGCGA ACCCTGGAGCG         TTCTGCGAGGCCATG  47 463
CTM43_RS12655 2587328 .. 2587352 +  -5.8  -3.10244   ACTCTTCGCCGTGAT          TTGAGGGAAA TATCT TTTCCGTCAA          TACTTTGTTGAAAAG  55 92
CTM43_RS12665 2589884 .. 2589920 +  -9.3  -3.40112   TTTTGGCGGCAGCTT    GCCGTTGTGCGGCGG CTGTTTA CCGTCGTGCTGCGGC    TGTTTGCCGTCTCGT  67 475
CTM43_RS12695 2594838 .. 2594848 +  -3.2  -4.98911   CGCGAACAGCTTGCC                 TGAC CCT GTCG                 TTTATTTTTCTCATC  73 23
CTM43_RS12700 NONE
CTM43_RS12705 NONE
CTM43_RS12710 NONE
CTM43_RS12715 NONE
        patD 2600738 .. 2600759 + -13.7  -5.31275   CGCGACCGAATTGCG           GCCCCTGTC TGTC GGCAGGGGC            TTTTTTGTGCTCGCA 100 266
CTM43_RS12725 2601297 .. 2601308 +    -3  -4.35091   TTTAATATTTACGGT                TATC GCAT GATA                 TTTGTTCTGAATATT  62 16
CTM43_RS12730 2601690 .. 2601724 + -15.2    -3.967   ACTCTGTTGTTCGCG     CGTAAAAAAGCAGCCT TCG GGGCTGCTTTTTTAGG     TTTCGTTGCTGAATT 100 21
CTM43_RS12740 2602250 .. 2602275 +  -4.8  -3.40522   TAGCACAAAGGATGA         GGTTACTG TATAAAAAAC CAGTAACC          TTATCATGGAGGCAT  52 69
CTM43_RS12745 2603343 .. 2603354 +  -5.8  -3.53012   CTCTTCGCTATGAAC                GCGA ATAA TCGC                 TTTCACCGGACCGAA  55 324
CTM43_RS12755 NONE
CTM43_RS12760 2607049 .. 2607069 +  -3.9  -3.60296   CGATCAGGCAGGCGA            GAGTGAGCG ACG CGTTCATGC            TTTGCCGTCCGGGTC  51 465
CTM43_RS12775 NONE
CTM43_RS12780 2609828 .. 2609846 +  -5.2  -3.36327   GAATCGCTCGATATC             GGCGGGAA GGA TTTGCGCC             TTATGGGTGACGTCA  54 424
CTM43_RS12790 2610595 .. 2610614 +  -4.9  -2.78715   TGCGGTGGCGCAAGA            TGGCGCC CGGCGC GGCGCGA             TATAATAGAAAAATT  47 1
CTM43_RS12795 2611070 .. 2611105 +  -8.2   -2.6155   TCCGCTGGAGCAGCA    CGCTGCCCGCCCGGT GACCTGA GCCGGGTGAGC-GCG    GTTAGTCTTGAAAGA  61 87
CTM43_RS12810 2616547 .. 2616562 +  -3.3  -2.71924   CCTGACAAACCAGAT              GGTTA TACACT TAACC               CTTTCCCGCCACGTG  42 136
CTM43_RS12815 2616895 .. 2616921 +  -4.5  -3.53012   CTTCCTCAGCGTCGG        CGCCGTGCTGTGA ATC TCAT-GCAC-GCG        TTTACGCACACCAAA  55 94
CTM43_RS12830 NONE
CTM43_RS12835 NONE
CTM43_RS12840 NONE
CTM43_RS12845 NONE
CTM43_RS12850 NONE
CTM43_RS12855 2625247 .. 2625258 +  -5.8  -2.66152   GCCTACAGCCACAGC                GCCT GAGG AGGC                 ATTATGCATTCATCT  51 20
CTM43_RS12860 NONE
CTM43_RS12865 2626957 .. 2626982 +  -3.9  -4.13767   GCCGTCATGAACAGA         GCGCTAATGAC CCTT GTTCTCAGCGC          TTTTGCCATGAGCGC  60 31
CTM43_RS12870 2627886 .. 2627899 +  -6.7  -3.59979   GAGCGGCAAATTTCT               GCCTA CACT TAGGC                TTTACCCTGGAGGCC  61 70
CTM43_RS12875 NONE
        pptA 2628836 .. 2628850 +  -2.8  -2.62396   GTTATAGCATGTAGT               TGCC ACTGGCG GGCA               TGATGTCCGCCAGTG  41 27
CTM43_RS12895 NONE
CTM43_RS12900 2631474 .. 2631488 +  -2.8  -2.70525   TCAGCTTCAGGAACC               GGTTGT GAA ACAAAC               ATTCCTTTCCGGCGC  41 79
CTM43_RS12905 NONE
CTM43_RS12910 2634319 .. 2634337 +  -3.1  -3.59262   CCCGACGGCGCTGCG            CCTGCGCG GGCC TGCG-AGG             TTTGAGCCTGTGAGA  49 289
CTM43_RS12945 2645050 .. 2645061 +  -2.2  -4.07568   GCGCCGTAGCGGAGC                GAGG GCCT TCTC                 TTTTAACGCCGCGGC  56 65
        catC NONE
        catA 2648487 .. 2648518 + -11.5  -3.05844   GAGTAAGCGGCATTA      TCGGCCCCGGGCA CGCTAC TGCCCGGGCCAGA       TATTGCACTCGAAAA  78 35
CTM43_RS12970 NONE
        benB NONE
CTM43_RS12980 NONE
CTM43_RS12985 2652761 .. 2652782 +  -2.8  -2.50077   CAGCAGGGCGAGAAT           CAGGCCGG GGATCA CCAGCCAG            CTGCTTTTCTGGCCG  39 523
CTM43_RS12995 NONE
        fdnG NONE
        fdxH NONE
CTM43_RS13010 2658390 .. 2658406 +  -8.1   -3.4878   TTTGCAATAAATTCA              TTCATTG CGG CAATGAA              TTCCTTGTGCTGTCG  62 459
        araJ 2661565 .. 2661580 +  -5.4  -3.53811   CTGCTCATCAAGCGC              CGCCAGA TGA TC-GGCG              TTTAACGCGGGTGGC  55 149
CTM43_RS13075 2670756 .. 2670774 + -10.4  -4.26881   GCAGGATGAAGGCGA             TGGTTGTA TTG TACAACCA             TTTCATTTTCTGGAC  85 179
CTM43_RS13080 2671838 .. 2671848 +  -2.4  -4.55826   CTTGCCACTGTGCCT                 GCAG TGA CGGC                 TTTTGATGTTTTGGC  64 112
CTM43_RS13115 2679609 .. 2679626 +  -7.7  -3.92075   TGCGGTTTTCGTTAA             TGGC-CGC CTC GCGGGCCA             TTTCTCGCTGCGCCT  68 152
CTM43_RS13130 NONE
CTM43_RS13135 2681994 .. 2682025 +  -3.8  -4.11394   AATACGCAACGCTGT      TTTCTTTTTTATGC TTAG GCAAAAGAAAGACA       TTTTCAGCGTAAGGT  60 65
CTM43_RS13140 NONE
CTM43_RS13145 NONE
CTM43_RS13150 NONE
CTM43_RS13155 2684782 .. 2684796 +    -7  -3.53224   CGCCACCGCTACCCC               GACGCC GGC GGCGAC               TTTACCCGGGAGATC  60 85
CTM43_RS13175 2687543 .. 2687564 +  -2.1  -4.42386   GTCGCCTAAGTAAGC           GGAGCACGT CGAT ATGAGCACC            TTTTCTCACTCGCAA  61 28
CTM43_RS13180 2688268 .. 2688288 + -14.7  -3.36073   AATCCGTAAGCCGTC            GTGCCCGCG TGC TGCGGGCAC            TCTTTCCGCAATATC  93 32
CTM43_RS13185 2689294 .. 2689312 +  -4.4  -3.55444   ACTGCCATCCGCCCG             CCACTCGC TAA GCGCGTCG             TTTACCGCGTGAAAA  53 84
CTM43_RS13200 2691100 .. 2691130 +  -4.7  -3.72027   AGCGGAAAAATGAAT       TGGCTCAGCGG TTATTTTTT CTTCTGAGCCA       TTATTGCTGGCGCAT  57 57
CTM43_RS13205 2692239 .. 2692253 +  -3.4   -3.6502   AATCTGACCTGAGCC               TGGCCC ACC GGGCGG               TTTCGCTGCCCGGTC  53 29
CTM43_RS13210 2694863 .. 2694915 +  -6.2  -3.33711   CTAAAAAGGTATAGC GCAGAGCGGCGTCGCGCCGTCCTGCG CCC CGCAGCACCTCGTGGTGTC-CTC-GC TTGAATTTATCGCTA  57 37
CTM43_RS13215 2695889 .. 2695905 + -11.5  -3.36327   TTTGGCTGAGGCCGG              GCCGCCG ACC TGGCGGC              TTGTCACTAAAATGC  82 32
CTM43_RS13220 2696573 .. 2696585 +  -4.7  -3.03441   AAAGCTAATTACTCC                CGGCG TGC CGGCG                TATTGCAGAATAATG  47 165
CTM43_RS13230 NONE
CTM43_RS13235 2699223 .. 2699237 +   -10  -3.33315   AAGCGGCTAGAATGG               CCTCCT TGC AGGAGG               TTATAAGAATGTTAA  73 100
        zapE 2700710 .. 2700725 +  -5.4  -3.91897   TTTCCGGGGCGGTTA              GCGTCAG CTG CTG-CGC              TTTATCGATCAGCAG  61 428
CTM43_RS13250 2703765 .. 2703778 +  -5.2  -3.37537   TAAGGCTATGCTTCC               CGGC CGTTAC GCCG                TTGGCTTTTCCAGTG  54 198
        mrdA NONE
CTM43_RS13260 2706594 .. 2706617 + -11.6  -2.92613   CTGTCGTGAATAGCA          CCTGCCAGCG GCGA CGCCGGCGGG           TCATTTCGCGTGCCA  78 45
CTM43_RS13300 2714463 .. 2714505 +  -8.3  -3.56325   GATCGTTTGTAACCC G-CGCCTTGCCGGCGGCGCG ACGT TGCGCTTCCGGCAACACGGC TTATGCTTGTGAAGA  69 29
CTM43_RS13305 NONE
CTM43_RS13310 NONE
CTM43_RS13315 2718086 .. 2718118 + -14.9  -4.55128   TTAAGCGGCTCTCAG      AGCCTGGGTTCGGTA CTC TACCGGACTCAGGCC      TTTTAATTTCAGGCT 100 192
CTM43_RS13365 2729708 .. 2729720 +  -4.7  -3.04894   ATGGGCGTTATCTTC                CAGCG GCG CGCGG                CTTTTGACGAAGCTT  47 516
CTM43_RS13390 2735385 .. 2735397 +  -3.3  -2.83677   GTAATTTCGACTTAG                CCATG CTT CAGGG                TATGATGCGTTGATT  43 91
CTM43_RS13395 NONE
CTM43_RS13400 2737977 .. 2738006 + -15.9  -2.55402   TAACCAGCCTAATCC       CCCTGAAGGATCT TTTA AGATCCTTTAGGG        CTTGGTGCTGATTTA 100 38
CTM43_RS13415 NONE
CTM43_RS13420 NONE
        puuE 2743769 .. 2743783 +  -5.6  -2.62184   TGATAAACCCCAAAA               ATCCGC TCA GCGGAA               TGCTGTGCCAGCCAA  46 278
CTM43_RS13435 2745368 .. 2745381 +  -8.1  -2.62026   CATAAGACAGATAAT               CCAGG AAGG CCTGG                CTTCGTCTTCAGGTA  58 120
CTM43_RS13440 2746007 .. 2746018 +  -4.4  -3.06183   CTCCTTCATCGAACG                GATG GCAT CATC                 TTCACTGGCGATAAC  47 332
CTM43_RS13455 2748578 .. 2748594 +  -5.8  -3.92324   CAGAAACCCTGCGAG             GGCAGGG ATAT CCC-GCC              TTTGCTGTTGAGAAA  64 95
CTM43_RS13470 2750982 .. 2751017 +  -2.5  -3.73953   GAAGATGGCCTCGAT   CCCGCCGGCCGCGCC TAACAGAT GGC-CGGT-GGCGGA    TTTCGTCGAGGTAAT  51 192
         asd 2757150 .. 2757192 + -14.8  -2.88663   AACATGTTACCGGAC CGGAAGCGGGCCGGCGGATA CCT TATTCCCCGGTCCGCTCCAG TCTATGCCACTCAGT  90 518
CTM43_RS13525 2761950 .. 2761962 +  -6.3  -4.95484   TTAGTTGCAAAAACA                GATTC AAA GAATC                TTTTGTTTCATGCTA  83 194
CTM43_RS13530 NONE
CTM43_RS13535 NONE
CTM43_RS13540 NONE
CTM43_RS13545 2764808 .. 2764820 +  -4.7  -3.09327   TGAAACAGTTTATCT                CCTCG GTG CGCGG                TCTTAACTAACGTAA  49 3
CTM43_RS13550 NONE
        hpxK 2767366 .. 2767388 +   -12  -2.71364   GGTTGCCGTGCCCCG           GCTGGCGG CTTCACA CCGCCAGC           TGGTTGACCACCTCG  78 48
CTM43_RS13565 2769424 .. 2769435 +  -7.2  -3.16177   CCTGGACTGACAATC                GGCG CTGT CGCC                 TTGACTCTATCGGCT  60 31
CTM43_RS13570 2770209 .. 2770228 + -12.2  -5.24129   ATAACATCCTGCTCA            GGGGTATC TTAC GATACCCC             TTTTTTATGCCCGCC 100 218
CTM43_RS13585 2774578 .. 2774609 + -15.9  -2.56596   CCAGCCGTTAACTTT      TGTGACCGGGCGT GGCCAG GCGCCCGGTCGCA       TACATTAGTCACGCA 100 30
CTM43_RS13595 2776810 .. 2776820 +  -2.4  -3.36878   AGCTTATCATCTCAC                 AGCG TAC CGCC                 TTCTGAGTAAATAAG  45 5
CTM43_RS13605 2778182 .. 2778200 + -10.3  -3.28712   GCGAATATCAGTGAA             GTGACGG GCGAG CCGTCAC             TTCTGCCCGGCGGAC  75 27
CTM43_RS13615 2779971 .. 2779987 +  -6.5  -2.84693   GGCATTTATTGTATG              GACTCTC GCA GAGAGAC              ATTCTTCCTGGTAGA  54 45
CTM43_RS13625 NONE
CTM43_RS13630 NONE
CTM43_RS13635 NONE
CTM43_RS13640 2784104 .. 2784116 +  -9.1  -4.56978   AAGATCTGCATCACG                CCAGC GAT GCTGG                TTTGTTATTTAACGA  90 88
CTM43_RS13645 2784636 .. 2784655 +  -4.4  -4.26953   ATGCTTAATACCAAC            TTGCTAAT ATCG ATTAGTAA             TTTATTAAATTAATT  62 33
CTM43_RS13650 NONE
CTM43_RS13655 2786199 .. 2786229 + -18.5  -2.86838   CCTGTAAGAACATCA       GCCCATGACTAAG CATTA CTTAGTCATGGGC       TACTCTTTGCATCTG 100 79
CTM43_RS13660 2786977 .. 2786994 + -12.7  -4.74103   TCGGCGGTAGTCACG             CAGGGGC GTAT GCCCCTG              TTTTTGCCTTAAAAA 100 31
CTM43_RS13670 2789258 .. 2789278 +    -9  -4.63218   ACAAGAGGCCATCTT           CAGCGC-GC CAGG GCAGCGCTG            TTTTATTCAGCCGGC  90 40
CTM43_RS13680 2791192 .. 2791215 + -12.4  -3.85698   TTATCTTGTTCGAAA          TGGCCCTGGT GATG GCCGGGGCCA           TTTCTGCGGGCAAGC  91 91
CTM43_RS13715 NONE
CTM43_RS13720 NONE
CTM43_RS13725 NONE
CTM43_RS13730 2802201 .. 2802211 +  -3.2  -3.97308   GACCGTCACTGAGCC                 TGGC ACT GTCA                 TTTGGTATGTTTCGC  58 453
CTM43_RS13740 NONE
CTM43_RS13745 2805305 .. 2805336 + -11.6  -3.38812   GTTAATACCTGCTGT      CACAGGGAGACTGC AGGT GAAGTCTCCCTCTG       TATTATTGCCGGGGA  82 36
CTM43_RS13750 2806598 .. 2806608 +  -6.8  -4.10161   CAACATGAGCTCTTG                 GCAC CGC GTGC                 TTTTCGGCAATGCTG  71 319
CTM43_RS13770 NONE
CTM43_RS13775 2809515 .. 2809531 +  -4.3  -3.72374   AATCCGTGAAGGCTT              TGAGCCT GGG GGGCGCA              TATTTGTTCGTGGGC  54 131
CTM43_RS13785 2813119 .. 2813141 +  -4.2  -3.83102   AAAAGGAATGGCGAT          CCTGAC-GA GTAATA TCGGTCAGG           TTTAGTGATGGTTTC  57 14
CTM43_RS13790 2813815 .. 2813825 +  -5.4  -3.71848   ATTCACGCAGGCGCG                 GCAT GGC ATGC                 TTGTTCGTGGGCCAA  58 87
CTM43_RS13800 2815631 .. 2815644 +  -3.7  -4.42976   GCGCAGTGCCCCGTG               GCCAC CCTT GCGGC                TTTCTTCGTTTCTGC  68 360
CTM43_RS13820 NONE
CTM43_RS13825 NONE
        fabG NONE
CTM43_RS13835 2821357 .. 2821388 +  -7.2  -2.73364   AAGGCGCTTAGCAAA      AGAC-GGCCCGAAGT GGG GCTTCGGGCCGGGCG      TCGTTCGGGTCAGCA  56 30
CTM43_RS13840 NONE
CTM43_RS13845 NONE
CTM43_RS13850 NONE
CTM43_RS13855 NONE
CTM43_RS13860 2827549 .. 2827565 + -12.3  -4.00756   CATCCGCCAGGATAA              GTGGCCA CCA TGGCCAC              TTCTTTCCTGGCGTG  95 67
CTM43_RS13875 2830336 .. 2830346 +  -5.4  -3.54743   TCTAGCGGCGGGTAA                 TGTG CTT CACA                 TTGTACTTACTGGTG  56 45
CTM43_RS13885 NONE
CTM43_RS13890 2834182 .. 2834205 +  -9.7  -4.58663   TCGTGATGGGTAAGA          TGCAGAGAA TCCCCC TTCTCTGCA           TTTTTACCCGGTGCT  91 47
CTM43_RS13895 NONE
CTM43_RS13900 2836792 .. 2836819 + -12.6  -4.09685   CCCATTAAGTATGAC        ACCGACCGGAGC TCTG GCCCCGGTCGGA         TTTTCACCCCTCGCC 100 33
CTM43_RS13905 2837589 .. 2837606 +  -2.7  -5.18371   AACTGTTGAGTCACC             TTCACGA TCGT TCCTGAA              TTTTCTTTTATGACC  77 174
CTM43_RS13910 2839092 .. 2839104 +  -4.8  -3.72374   CAGATGATGCAGAAC                GCTG AACGC CAGC                TGTTTATTGATCACA  56 389
CTM43_RS13920 2841139 .. 2841153 +  -8.5   -5.1101   AAATGCTGAATATAA               GCCCG CTGGT CGGGC               TTTTTTGCATGGTGC  93 202
CTM43_RS13925 NONE
         map 2842390 .. 2842414 +  -7.2   -3.8579   TTATGGCTGATGCGC          GCATAAACCG CACAA CGGTTTATCC          TTTACCTTCTTGCAT  69 182
CTM43_RS13940 2843781 .. 2843799 + -10.2  -3.98627   ATTGCCATTTTCCAA             GGGCAGCG TCC CCCTGCCC             TTATTCTCTTCCTCG  85 50
CTM43_RS13945 NONE
CTM43_RS13950 2847023 .. 2847036 +  -3.1  -3.42315   ACTCATCTTACAGCA               GACGT TATC ATGTC                CTTTTTAACTCTCCT  47 4
CTM43_RS13955 NONE
CTM43_RS13965 2849445 .. 2849482 +  -9.9   -2.8547   TTAACTATTTGCGCA  GCC-GCTGGGGGC-AGC CGCAGA GCTAGCCGCCAGCCGGC   TCTGCTATAGCGCCT  68 0
CTM43_RS13995 2855600 .. 2855635 +  -3.1  -3.92075   CTGCCCCTGCGGATC    GAGGATCAGGCCGAC GTCCAG GTCCGCCTGACGCAC     TTTCTGGCTGACGGT  55 483
CTM43_RS14005 NONE
CTM43_RS14010 2858211 .. 2858231 +  -8.9  -3.55444   GCGGCCCGTCACCGG            CTGGTCGGC GCG GGCGACCGG            TTTCACCCGTACGGC  66 41
CTM43_RS14020 2860835 .. 2860846 +  -5.8  -2.75074   CATCGATGGTGAAGA                TCCG CCAG CGGA                 TGATATTGCCCTGCG  47 400
CTM43_RS14040 2863291 .. 2863304 +  -2.3  -3.57792   GTTTCGCGAACGCGC               CGAGC AATT GATCG                TTTAACCATAACTAA  47 7
CTM43_RS14045 NONE
CTM43_RS14050 NONE
CTM43_RS14055 2866001 .. 2866021 +  -8.1  -2.77899   CTCCGTCCATGATGC            CCCCGGCGG CCA CCACCGGGA            TGGTTAGTCGACGCC  54 443
CTM43_RS14065 2867638 .. 2867656 +    -3  -3.05384   CAGCAGCGCCAGCGC             CGCGGC ATAGAGC GCCGGG             TTAAATGAAGCCGCG  43 76
CTM43_RS14080 2869396 .. 2869407 +  -2.2  -4.02051   GGCGGGCGTTAAGCG                CTGT AAAA GCAG                 TTATTTACATTCGTA  55 51
CTM43_RS14085 2870778 .. 2870788 +  -2.4  -3.05596   GAATCGGCAATTGAC                 GACG ATT CGGC                 TTCCGTGCCAACATC  42 90
CTM43_RS14090 2871232 .. 2871261 + -14.3  -3.66378   CAAAAACGCCGAATA       GGCTCCTGCGCCCG CCA CGGGCGCA-GAGAC       TTTCCCTGCCATGTC  95 25
CTM43_RS14095 2872299 .. 2872311 +  -4.9  -3.15544   AATCCAGAACGTTGC                GATAT TCA ATATC                TTAGTCAGCGTGCGA  50 122
CTM43_RS14100 NONE
CTM43_RS14105 2873060 .. 2873081 + -14.4   -2.7395   GGGTGAATGAGACAG           GCGGCGCC GCAAGA GGCGCCGC            GTTTCAGCACTATAT  88 31
CTM43_RS14170 2883367 .. 2883378 +  -7.2  -3.75153   CAGGGTATGGCAGTC                GCGC TGAC GCGC                 TTTCGCTTCCAGCGC  63 150
CTM43_RS14180 2885265 .. 2885307 + -11.8  -3.28924   AAGCACAATGGCGTC GCCGGCTTTCACCAGCGCTG CCG CCGCACTGGCGATAGCCTGC TTCTCAAGCGGACTG  75 523
CTM43_RS14200 NONE
CTM43_RS14205 NONE
CTM43_RS14210 NONE
CTM43_RS14215 NONE
CTM43_RS14220 NONE
CTM43_RS14225 2893912 .. 2893970 +  -6.1  -4.10855   CAGCACACGGTCGCC CTGCCA--CTGGCAGCG-CAGGTCGCCGC CGCGA GCGGAGACCTGGCGC-GCCATCATGGTGG TTTTCCCCAGCTTTT  69 156
CTM43_RS14235 2896056 .. 2896080 + -16.4  -5.71712   CCGTCGCACAAAAAA          GCCCGCCGGT ATCGC GCCGGCGGGC          TTTTTTTCTCTGCGC 100 43
        marR NONE
        marA NONE
        marB 2898152 .. 2898167 + -11.8  -5.93809   GCATAATTGTGTATA              GCCCCG TCTC CGGGGC               TTTTTTTTATCCGCG 100 52
        ydeE 2900461 .. 2900490 +  -6.5  -3.25942   CTCCGCTGGCCAACG      CCTGAC-GCCAGC TGGCAT GC-GGCTGTCAGG       TTGCTGTCGGGCCGT  57 21
CTM43_RS14270 2901310 .. 2901330 +  -9.7  -2.56596   CAATCTCTTTGATGA            CCGAGGG CTGGATC CCCTCGG            TGGGTTCATCAAGGA  60 258
        ftrA NONE
CTM43_RS14315 2909777 .. 2909804 + -12.1  -3.87815   CCCTCTGATAGCCTG        CGCCTGGTTTA CACGTT TAAGCCAGGCG         TTTCTAAGCGTCAGC  91 33
CTM43_RS14330 NONE
CTM43_RS14335 2916507 .. 2916531 + -17.1  -2.52464   GTACCGTCGGACATC          TCCGCCGCCAG CAG CGGGCGGCGGA          TCCCTTCGCGACGCA  85 327
CTM43_RS14350 2918830 .. 2918849 +  -5.6  -3.28712   CACTGGCAACGCTAA            CCCG-GCGG TGG CCGCGCGCG            TTATCCGGCCCGCAG  54 26
CTM43_RS14360 NONE
CTM43_RS14365 NONE
CTM43_RS14370 NONE
CTM43_RS14375 NONE
CTM43_RS14380 2924884 .. 2924899 + -10.4  -3.17075   TTTGATGTTAACCTG              GGTGGC TCCG GCCACC               TTAACTTCGCCCCGG  73 36
CTM43_RS14390 2926924 .. 2926945 +    -3  -3.65812   CAAAAGGATTTAATT           TAGAGTGA TAATAT TCACTCGA            TTATATTCAGGCAAG  51 202
CTM43_RS14400 2928778 .. 2928789 +  -5.8  -3.64703   TACCAGAGGACATCT                CCTG AACG CAGG                 TTTCGCTGACGGCGC  58 288
CTM43_RS14425 2931747 .. 2931760 +  -2.3  -4.12456   GCGTGGTATTTGGGC               AGGTG AAAA CACCG                TTTTGCAGCTGATCT  55 436
CTM43_RS14430 2932787 .. 2932799 +  -6.2  -3.72576   TTCTTCCAACCTGCG                CCCG TCGTC CGGG                TTTGCTGACAGCGCC  61 328
CTM43_RS14440 2933828 .. 2933844 + -10.8  -3.75378   AGATCAGACAAAAAA              CCGGGC AGCAC GCCCGG              TTATCTTGTCAGACT  81 62
        ydfG NONE
CTM43_RS14455 2937578 .. 2937610 + -10.6  -2.71681   TGAAGAATAAGAGTC     AGACGGCTGC--CGGC ATG GCCGACGCAGCCGTCC     TCATTGAAGGGATTA  69 31
CTM43_RS14480 2942273 .. 2942294 +  -9.3  -4.09822   CCGCTCCCTGACCAC           GCTGGCGCC TGCG GGCGCCGCC            TTTCTGTAATCCCTT  78 42
        speG 2943316 .. 2943343 +  -3.2  -4.77567   CCGTCGACGTAATAG        TTGGCGTCCAGC AGCA GCGTGGCGCCGG         TTTTGTTCTCCACAT  73 446
CTM43_RS14495 2943996 .. 2944024 +  -9.7  -2.80816   GTTTCAAATGAAAGA        TCTTATCCCTG CATTGAC CAGGGATAAGG        TCTACTGGCTACCCA  68 51
CTM43_RS14500 NONE
        dmsB NONE
CTM43_RS14510 2948029 .. 2948039 +  -2.4  -3.14132   ATGACCGTCGGTATG                 GCGG TTG CCGG                 TTAATGAGACGGCGC  43 11
        dmsD 2948701 .. 2948721 + -19.7  -5.08255   ATCGTTAACCCTTCG            CCGCGCCGG TAT CCGGCGCGG            TTTTATTTTGCCGCT 100 33
        clcB 2950185 .. 2950198 +  -3.7  -4.72272   GCAGCTCGCCGATCA               GCGGC GCCG GCAGC                TTTTTGCTGAGGACA  75 88
CTM43_RS14540 2954536 .. 2954553 + -12.7  -3.54424   AATAGTCGCGTGTAA             CGTGGCC TGTG GGCCACG              TTTCACCACATGCCC  89 36
CTM43_RS14545 2956358 .. 2956378 + -19.7  -2.69964   CTACCTGTAATCATA            CGCGCCGGG CTA CCCGGCGCG            TCCTGTCGTTCCCGC 100 31
CTM43_RS14550 2956968 .. 2956986 +   -16  -5.24129   AACCTTCTTAATAAT             CGGCGCTG TTT CAGCGCCG             TTTTTTCTGGAGAGC 100 57
CTM43_RS14555 NONE
CTM43_RS14560 2958813 .. 2958829 +    -3   -3.5594   TACAGCGGGGCAAGG             CGTGAAG GAAG CTTC-CG              TTTGCCGCCTGGCTT  49 21
CTM43_RS14575 2961068 .. 2961083 +  -3.2  -2.85378   TGCCCTACACTCTCT              CCGTAG ACCA CTACGC               CTTATGTATTATTGA  43 77
        mdcA NONE
CTM43_RS14585 2963741 .. 2963753 +  -4.1  -3.29461   AGTTGCCGGCTAACG                CATTC AGA GGATG                TTATGGAACAGATTA  50 28
        mdcC NONE
CTM43_RS14595 NONE
        mdcE 2965721 .. 2965764 +  -8.9  -4.08216   GAAAACCTGCCGGAA GCCGTCCC--CCGGAGCGCG TAATAAC CGCGC-CGGGTAGGGACGGC TTTTAGAAAAAATAA  78 65
CTM43_RS14605 NONE
CTM43_RS14610 NONE
        mdcH 2968388 .. 2968416 +  -8.8  -3.56643   AGACGATAGAGATCA        GCTGGCGCATCT GGTAG AGTTCCGCCAGC        TTTAGCAGCTGTACA  66 113
        dcuS NONE
        dcuR 2975280 .. 2975313 +  -6.7  -2.79183   GGCGATGAGAGAATA     ATGTCGCGATTTTTG GTAA CGAAAATCGCGTCGA      TATCCTGCCGCTGAC  49 82
CTM43_RS14665 2981159 .. 2981179 + -15.4  -5.24799   TGTTCTGATTCATAA            CCGCCGGG ACTAC CCCGGCGG            TTTTTATCTTTATGG 100 33
CTM43_RS14670 2982884 .. 2982906 + -16.3  -5.36441   TGACGCTGATATCAG           GCCGTCGCC GTTTG GGCGACGGC           TTTTTTATGTCCGCG 100 51
CTM43_RS14675 2984784 .. 2984817 +  -3.8  -3.63744   ACGTTCCCGGAAGGC    CGG--GGCAGCCCGCA TGGA TGCGGGCTGAGGGCCG     TGTTTTGCAGGGACG  55 172
CTM43_RS14690 2986365 .. 2986376 +  -7.2  -3.61398   TCTTTCAGCTCATCG                CGGG TCAC CCCG                 TTGTTAAACGACGCG  60 473
CTM43_RS14725 2992572 .. 2992600 + -10.4  -3.24232   CTGTTCCACCGGCTG       GCGCAGCAGG-GAG AGG CTCGCCTGCTG-GC       TGTATTTCCCCCGCC  68 310
CTM43_RS14740 2995312 .. 2995329 +  -3.3  -2.78463   GCGTCGCGCTTAACT             TTCCCTG GCAG CGGGGGG              TGTAATGGAAGCCAT  43 3
CTM43_RS14745 NONE
CTM43_RS14750 2998786 .. 2998826 +  -5.9   -4.4267   GGCGATCGCAGAATG  CCTCCACGGCGGATAGCCC GCC GTGCTATCTGGCGATGCGG  TTTTACCTTTTGGGA  72 385
CTM43_RS14760 2999422 .. 2999457 +  -4.1  -4.13767   GGGCTATCTGTTGCT    TTGACTGAAAATGCC TTTTCT GGAATTTTCAGGTAA     TTTTACAATCAAAAG  60 22
CTM43_RS14765 3000355 .. 3000368 +  -4.5  -3.32022   CAGCTGGCCGGGCAG               GCG-CG CAA CGTCGC               TTAATCTCTGCGCAA  52 8
        uspE 3001478 .. 3001496 +   -16  -5.65513   CGCTACCGCTCATCT             TCCCCCGC CTC GCGGGGGA             TTTTTTTGCTTGCTG 100 42
CTM43_RS14790 NONE
CTM43_RS14795 3006324 .. 3006352 + -12.5  -5.86061   TCGCTGCTGGCTGGC        TAAAAAGGCGGCG CAT TGCCGCCTTTTCA        TTTTTTTTCATCCCC 100 41
CTM43_RS14805 NONE
CTM43_RS14810 3008790 .. 3008800 +  -2.4  -3.05596   CCGAATACGATGGTC                 GCGC GCA GGGC                 TTCGATCCCCCGCTC  41 188
        rstA 3009853 .. 3009885 +  -9.2  -2.57244   GCTCATCGCGCGCTC     GCCGGCGGCAAA-GT TATC ACGTTTGCTGCCTGC      TGCGTTCGTCCCTGG  63 71
CTM43_RS14825 3010478 .. 3010492 +  -4.2  -4.16251   GAAATCACCGCATCG               AGTGAC ACT GTCACC               TTTTCACCGTTCTGT  62 91
        rstB NONE
CTM43_RS14835 3013039 .. 3013059 +  -4.6  -3.57144   GGCTTCCGTCAGGTA           GCC-CAGCG CCAG CGCCGAGGC            TTTGAGAGTCAGCCC  53 87
CTM43_RS14850 3017777 .. 3017799 + -16.3  -3.61988   GTTGGTGATAACTCA           GCCAGGCGG TCTCT CCGCCTGGC           TTCATTTATGGATAA 100 69
CTM43_RS14855 3019392 .. 3019417 + -11.9  -3.11366   TAACTTATCGGTACA         GGAGACGGC CAGCGCGC GCCGTCTCC          CTTATTTTCGCGTCA  79 38
CTM43_RS14865 NONE
CTM43_RS14870 3023515 .. 3023540 +  -5.4  -3.33696   AGACAGCGACAATCA         CCACCAGCAGG ATAAA CCCG-TGGTGG         TTGCTTGCCAGCGGG  53 104
        ydfZ 3025018 .. 3025038 + -16.9  -2.78032   CCAGGTCGTTAGTAT            CAGGCCACC TGT GGTGGCCTG            CTCTTTTCCCGGGAA 100 50
CTM43_RS14890 3026193 .. 3026205 +  -9.1  -3.23711   TTTGCCCCCTTTGGT                CGGTC ATC GACCG                TTAATACCTTCTGAG  67 86
CTM43_RS14895 NONE
        yedF 3027686 .. 3027709 + -16.7  -2.74157   GTAGCGCCGTTTTCC          CGCCGGCGG CCTTCC CCGCCGGCG           CTTGTCTCCTCGTTC 100 37
CTM43_RS14905 3028337 .. 3028350 +  -3.1  -3.73402   GTCTCAGGGGGAGGC               GGC-GA GGG TCAGCC               TTTAATCGCGGGTCT  51 45
         gap 3030279 .. 3030290 +  -7.2  -3.14132   CCCGCCACCTGGTCC                CGCG CCGC CGCG                 TTGATCAGCGGCCCC  54 513
CTM43_RS14930 3034067 .. 3034080 +  -5.2  -3.30124   GGGGGAGATCGCGCC               GCGG GGGAAA CCGC                TTATCCCAGGTCCGG  54 109
CTM43_RS14965 3043526 .. 3043546 + -11.8  -5.95539   TCAGCAACCGCATCA            GGGGTGGC CTTGC GCCGCCCC            TTTTTTTCTTTGCCG 100 47
CTM43_RS14975 3045780 .. 3045797 +  -8.5  -3.01712   TTATCCGGCATAAAA             TCGTTAG AGCT CTAACGA              TATTGACAGACGACC  63 99
CTM43_RS14980 NONE
CTM43_RS14985 NONE
CTM43_RS14990 NONE
CTM43_RS14995 NONE
CTM43_RS15000 3051495 .. 3051508 +  -5.2  -4.33153   ATGGTCATATCCACC               CGGC CTTTCA GCCG                TTTGTTGATATTGAA  69 458
CTM43_RS15010 3055828 .. 3055856 + -12.4  -4.82678   TGCAGCCTAATATTT        CACTCCTCTCGC TTCCT GCGGGAGGAGAG        TTTTACTTTTTCTCG 100 31
        paaZ 3070079 .. 3070094 +    -9   -5.0133   AGCGCACGTTCTCAA              TGCCTC TGCG GAGGCA               TTTTTTACGCCCGTC 100 344
CTM43_RS15095 3072552 .. 3072582 + -20.4  -2.72049   ACCGCCTCTTCCCGG       CTGGCCGGCGGCGG CAA TCGCCGCCCGCCAG       TCGTTCAACGCTATA 100 73
CTM43_RS15140 NONE
CTM43_RS15145 NONE
CTM43_RS15150 NONE
CTM43_RS15155 3083500 .. 3083535 + -12.4  -2.64616   CCAGCCCGGGTCAGC    CCGGGCCGTCGCTGGC CGCC GCCAGCAGCGGCACGA     TGATATCGCTGAGCG  78 48
        feaR 3087284 .. 3087297 +  -5.9  -3.35344   GCTGCTGGTAGCTTT               CGCTG CGCG CGGCG                TTAATCTGCTTTACC  53 163
CTM43_RS15190 NONE
CTM43_RS15195 NONE
        hslJ 3092729 .. 3092749 + -13.9  -3.13403   TGAGGTGCCGCTGAC            GCTGCCCCG CGA CGGGGCCGC            TGTTAGTAGCCGCAG  90 48
        nifJ 3096935 .. 3096955 + -12.6  -3.68359   CTGTCCATAAAAAAA            GCCCGAAC ACAAC GTTCGGGC            TTGTCGTTTTACCGA  90 55
CTM43_RS15220 3098424 .. 3098443 + -16.4  -3.53012   AGTTCTGATGCGCCT            GCCCGCCG GTTC CGGCGGGC             TTTCCCCCACCCGCC 100 33
CTM43_RS15225 NONE
        uspF 3099296 .. 3099313 + -14.1  -5.27938   TCCGCTAACGCCGCA             GCCCGCC GCCC GGCGGGC              TTTTTATTTCCGCAT 100 33
        ttcA 3100463 .. 3100492 + -12.1  -2.81173   AGTGAAATAACCCTC       ACGCGTCTCAGGC AGCC GCCTGAGACGCAC        TCTCCTGCCCTTACT  80 31
CTM43_RS15250 NONE
CTM43_RS15255 NONE
CTM43_RS15260 3105503 .. 3105533 + -15.5  -3.13504   AATCCGCCCTCTTCT       CCGGTTACCTGCG CGGCC CGCAGGTAACCGC       TACTTTTGCTCCACA 100 39
CTM43_RS15265 3105985 .. 3106013 + -12.4  -2.83191   TAACCCCACCTTTCT       CCGCCAGGACGCC TCGC GCCG-CCTGGCGG        CTTCTCTATTCTGCC  80 90
CTM43_RS15280 3109408 .. 3109424 +  -3.5  -4.56597   AACGCTCGCCAGGGC              ACGCTCC TCT GGTGCGA              TTTTTGCAACCAAGA  66 210
CTM43_RS15285 3110083 .. 3110099 +  -2.2   -3.6003   CCCCGGACGCTATGC              GGTGTA ATGGC TTCACC              TTTAACGGTCATTTC  47 19
CTM43_RS15290 3111815 .. 3111827 +  -4.7  -3.14881   AATGATAAACGGCAG                CGAGC GCA GCACG                TTAATCAGCGGATTC  47 513
CTM43_RS15325 3118627 .. 3118647 +  -3.9  -3.51708   GTGTTCTCATCTCCA            GGCGTTATC CCT GATACCACC            TTCCTTTGAGCAGTC  52 115
CTM43_RS15330 3119055 .. 3119089 +  -4.3  -3.08679   GTGAACGCGGGTGGG    GAAATT-CCCCC-GGTG ATT CACCCGGGGGCAACGTC    TGTTCCCTCACCCGC  47 54
CTM43_RS15360 3124231 .. 3124244 +  -8.1   -2.6462   CTATCAGATGTTTCA               GCGAG ATAC CTCGC                ATCTTTCCCTAACTC  58 267
        mpaA 3128212 .. 3128226 +  -2.7  -4.44974   CCAGAGCCAGCGCTT               CGGTC AGGCC GCCCG               TTTTATCCAGTTTGA  64 222
CTM43_RS15385 3129635 .. 3129653 +   -16  -5.06414   CATTCGATCTGCCCA             GCCCTCGC TCT GCGAGGGC             TTTTTATTGCCGCGG 100 74
CTM43_RS15405 3134911 .. 3134940 +  -4.1  -3.44146   CCGGGCAAGGCGAAG       CCGCCGCCCGG CAATGTCT CTGAGCGGAGG        TTACTTCTCCGGGCG  50 85
CTM43_RS15440 3140587 .. 3140597 +  -6.8  -3.28712   GCCGGGCGCCATAGC                 GCTG CAG CAGC                 TTCTCGCCGACCCGG  56 417
CTM43_RS15455 3145743 .. 3145758 +  -8.2  -2.66964   AAAGCGTCAAGCACC              CGCTGC AGCC GCGGCG               TCATATCATCCGTCA  53 503
CTM43_RS15465 3147141 .. 3147154 +  -2.3  -3.87373   TACGGCTAGTCGCCC               GTCGG GTCA TCGGC                TTTCTCCCCGCTATA  52 76
        sapA NONE
        sapB NONE
        sapC NONE
        sapD NONE
        sapF 3152724 .. 3152749 +   -14  -2.73364   GCTGGCAGGCGACGG         CAGGGGCGGC CCTCAC GCCGCCCTTG          TCATTCAGGTAGAAG  88 40
CTM43_RS15500 NONE
        fabI 3155919 .. 3155942 + -14.6  -3.67597   GAAATAAGTTCCTTC          CCCTCCTCGC CCCG GTGAGGAGGG           TTCTTCCCTCCCCCA  95 34
CTM43_RS15510 3157280 .. 3157313 +  -7.4  -3.63744   GAAACAGCGCTTGCT     GCGGCAGGCATATT CGCGTA AAAATGTCAGCCGC      TCTTTTAGCCACGAA  67 47
CTM43_RS15515 3159284 .. 3159309 + -13.3  -4.07595   GTCTGACGCCCCTTC         ACAGCGGTTCC TGCG GGAACCGCTGC          TTCTTTCCTCTCTAT 100 35
CTM43_RS15520 3159631 .. 3159647 +  -5.8  -3.16191   TCAGCCATGCCGCAG             CCGG-CC ATAT GGACCGG              TTGCTCGCCATATAG  55 44
CTM43_RS15525 3160461 .. 3160476 +  -7.5  -3.95073   CCATCTCCTGCCAAA              GCGCC GGAAGG GGCGC               TTTATCGCTCTGAGA  69 53
        osmB 3160991 .. 3161018 + -18.5  -3.90744   GCACGTTAAATCATT        CAAGGCCGCGG CATTTA CCGCGGCCTTG         TTATTTCAACCAGAC 100 89
        ribA 3165489 .. 3165507 +   -16  -4.41616   GGAATAACCGAAAAA             GGGCCAGC GAT GCTGGCCC             TTTGTTTCACAGCAT 100 47
CTM43_RS15590 3173577 .. 3173606 + -15.1  -3.96216   AAGACCAGTGAAAAC       AATAACGCGAGGC CCAG GCCTCGCGTTATG        TTATTTACATCAGCG 100 39
CTM43_RS15605 NONE
        cobO 3176479 .. 3176507 + -12.4  -2.81547   CCTTAGAGCTGGTTT        CCGGCGTGAGCT CCACC AGCTCGCGCAGG        TAGTTGGTCTGCGCC  70 244
CTM43_RS15625 3179591 .. 3179601 +  -6.8  -3.06915   CGATCTTTGATCTCT                 TCCG GGT CGGA                 TTCGGTAAAGTCGCT  54 195
CTM43_RS15640 NONE
        trpD NONE
        trpF NONE
        trpB NONE
CTM43_RS15660 3187767 .. 3187796 + -15.8  -3.01125   AAAACCGCCTGACCA       TCAGCCGCCTGGC ATCGC GCCAGGCGGC-GA       TAATTTCTGCAAACT 100 29
CTM43_RS15670 3189402 .. 3189419 + -12.7   -5.7946   GCTTCCAGTATTTTT             GCCCGCA CTTG TGCGGGC              TTTTTTTATTCGCGA 100 156
CTM43_RS15680 3190637 .. 3190651 +  -7.1  -3.06073   TCAGCGCAAGCCAGA               CGACG AATAA CGTCG               CTTTTGCGCGGTGTG  59 268
CTM43_RS15685 3192998 .. 3193017 + -10.7  -3.04398   TTTCTGAGTCTGCGC            GTGGGGC CGTTGC GCCCCAC             CTTTTAGAGAGAACA  74 34
CTM43_RS15690 3193768 .. 3193786 + -10.3   -3.5394   TGACGAGACAATGAA             CTGGCCA TCCGT TGGCCAG             TTTACAGAAGAATTT  77 78
CTM43_RS15700 NONE
CTM43_RS15705 3195865 .. 3195876 +  -2.2   -3.2963   TGATCTATTTATTCC                GCGT GTAT ATGC                 TTATCCGCAGCTAAT  45 0
CTM43_RS15710 3196691 .. 3196711 +  -8.5  -2.55712   CATCTCGTTACATTG            TAATGATAA TTG TTATCATTA            ATATTCTCGATCTCA  60 232
CTM43_RS15715 3198947 .. 3198964 + -14.1  -3.10474   CCTTCTGAACCACCG             CGCCCGC GCCA GCGGGCG              TATTCCCCTATTCTC  90 33
        yciA 3199441 .. 3199462 + -17.3  -2.52464   CCAGCGGAATAAGAA           GGTGCCCGG CTTG CCGGGCACC            TGACTTACAGAAAGC 100 29
        hxpB NONE
        kduD 3201824 .. 3201853 +  -6.5  -3.20322   TACACTGTATAAAAA       CCCTATACTGTATG AAT CG-ACAGTTTAGGG       TGTGTTATCATGACG  57 90
CTM43_RS15740 3202456 .. 3202470 +  -2.7   -3.9941   GAGTGGGCGATAAAG               CGGCG GAAAA CGCCA               TTTGGTTATAACCCA  56 28
CTM43_RS15745 3203999 .. 3204016 + -11.3  -6.02919   GCAAGCACAAAAAAA             CCGCTGA TCAT TCAGCGG              TTTTTTTATTTCTGC 100 44
CTM43_RS15755 3206749 .. 3206769 + -18.3  -3.43217   CCGGCGTAGTAAAAA            GCCCGGCAC GCT GTGCCGGGC            TTGATTCACTTTCCC 100 32
CTM43_RS15795 3213847 .. 3213864 + -14.1  -4.75967   TAGTCTCTCCCCCCG             CCCCGGC CTGC GCCGGGG              TTATTTTTTGTCCTT 100 38
CTM43_RS15800 3214817 .. 3214865 + -10.2  -3.25652   GCCACCAATAAAAAA CCGCCGGCCCTGCCCAACGCCTG ATGG CAT-TATTGGGCAAGACCGGCGG TCTTGATTCAGTGCG  73 44
CTM43_RS15835 3222997 .. 3223024 + -14.2  -2.83403   TAATTCACACCCTTC        TCTCGCCTCCCGC TGT GCGGGGGGC-AGA        ATTTCCTGAGCAAAA  88 38
CTM43_RS15840 NONE
CTM43_RS15845 NONE
CTM43_RS15850 NONE
CTM43_RS15855 NONE
CTM43_RS15860 NONE
CTM43_RS15865 3228476 .. 3228500 +  -4.1   -3.3692   AAAGAAATCGGCGCC          TGGCGAGCGGA GAA TACGCCCTCCA          CTTTTTACCGTCGGG  50 72
CTM43_RS15870 3229845 .. 3229855 +  -2.4  -3.85698   ACTCGCCCCGCCTCA                 GCGC GTC GCCC                 TTTGTCGGCGACGCG  52 40
CTM43_RS15885 3232945 .. 3232960 +  -3.2  -4.37092   TCCACCCCTTCATCG              TTGGTC AGCT GGCCGA               TTTTCTCGGCAAAAT  64 442
CTM43_RS15905 3237846 .. 3237884 + -12.3   -3.1355   CCGAGCCTGCTGCCA  TCGCCCGGCGGCGCTGCG CTTG CGCGGC-CAGCCGGACGG   TTCCCTCTCCCTCCG  82 173
        sppA 3240893 .. 3240917 + -18.6   -4.7173   CCGTTAATACGCAGC          GGCTGCCCCG TCTCC CGGGGCAGCC          TTTTTCCCTCTCCTG 100 34
CTM43_RS15930 NONE
CTM43_RS15935 3242702 .. 3242721 + -16.4   -3.4811   GGCCTGATCCCTCCC            CCCGGCGC CCTC GCGCCGGG             TCTTCTTCTGCCGCC 100 34
CTM43_RS15940 3244172 .. 3244184 +  -9.1  -2.87132   ACGCAGGCAGCATCG                CCTGC AAT GCAGG                TATATCGCGCCGCCC  65 81
CTM43_RS15945 3244701 .. 3244714 +  -9.5  -4.23104   CGCCGGAACGTCTCA               CCGCC GGCC GGCGG                TTTATTGCAGTTTAA  83 105
CTM43_RS15960 3246811 .. 3246828 + -11.3  -6.02914   AAAAGTAATCTGTAA             GAGCGAC TTCG GTCGCTC              TTTTTTTTGTCTGCA 100 51
CTM43_RS15965 3247748 .. 3247776 + -20.5  -5.28942   AAAAAACGCTAATAG        CAAAAGCCCCGTT GGT AACGGGGCTTTTG        TTTTTCTTTGCCGTG 100 29
CTM43_RS15980 NONE
CTM43_RS15985 3253223 .. 3253252 + -15.1  -4.25104   GCTTAATTAAATACT       CAGCCAGTGAGTC GAGT GACTTGCTGGCTG        TTTTCCTCAGACACA 100 35
CTM43_RS15995 3254532 .. 3254560 + -14.6  -3.04144   AGACGTCGCTCTCAC        GCGGCCAGCAAC CGTCT GTTGCTGGCCGA        TCTTCCACCTGCCCG  91 94
CTM43_RS16010 3257694 .. 3257710 + -11.5  -3.16191   CCCAGGAGCGCGCCA              GGCTGCG TAC CGCGGCC              TTACTGGCGCTATAG  69 291
CTM43_RS16020 3259297 .. 3259313 + -12.3  -3.26471   GCGTGGTGTAGCGCG              GCGAGAG CAT CTCTCGC              TTCATCTGCCACTGC  75 76
CTM43_RS16035 3261767 .. 3261779 +  -6.2  -4.15044   GAACGTCCTTATAGA                CCGC GATCA GCGG                TTTGTTCCACGCCGC  69 339
CTM43_RS16045 3263545 .. 3263587 +    -5  -4.70626   GCCGCATGGCGTAAA AATCCTGTTTATTC-ACGC CACGAT GCGTAGAGTAAGCGGGATA TTTTTGGCATTCTTA  73 63
CTM43_RS16050 3264352 .. 3264370 +  -3.1  -4.18094   GGATCCTCAGCCATC             ATCGTCA CCATT TGACGAA             TTTTCGGGTGGTTTG  60 307
CTM43_RS16060 3266134 .. 3266161 +  -7.6  -2.87146   AATTCACCCCTGAAG        ATGACCGGCAGC GCCC GCTGCCGGTGGA         ATTATTGTGCCGCGG  59 28
CTM43_RS16070 NONE
CTM43_RS16075 3268223 .. 3268244 + -11.5  -5.40072   TAATCAATGAGTTTT           TCCCCGTCG CCCC CGACGGGGC            TTTTTTTCCCACCGC 100 395
CTM43_RS16085 3269416 .. 3269430 +  -2.8  -3.14132   CCGCGATATCCAGTA               TCATGC AGG GCATCA               TTCGTGGGCACAGGG  45 45
CTM43_RS16090 NONE
CTM43_RS16095 3269633 .. 3269649 +  -3.6  -3.00651   GGCTGGTGGTGATCG              CCGCGG CGATA TTGCGG              ATTTATCCTATCCCA  45 29
CTM43_RS16100 3270044 .. 3270064 +  -3.1  -2.56747   AGGAAGAACATGGAC            GTCGTCCAC TCT GAGTACGGC            ATATTGTACTCGCTC  40 197
CTM43_RS16120 3272355 .. 3272365 +  -3.2   -4.2131   TTAAACGCGTCCCAC                 TGCG AAA TGCA                 TCTTTTTTAATCCGT  60 5
CTM43_RS16130 3275190 .. 3275212 +  -6.8  -2.72471   CCGCCTCTGAAGCGG           GCCGCCGTCG TGG CGGGGGCGGA           GTTCTATAATCAAAA  53 31
CTM43_RS16135 3277052 .. 3277062 +  -4.6  -3.01712   AGCTAACCGGGACTA                 TCGC TCA GCGG                 TATTAAGCAGCGAGA  49 35
CTM43_RS16145 3279574 .. 3279594 +  -9.6  -4.65895   CGCAAAATAAGCAAT            AGCCGCCG GTAAA CGGCGGCA            TTTTTCCATGCCGCG  91 31
CTM43_RS16165 3282830 .. 3282854 +  -2.8  -2.73875   GGCGGCGCAGCGGCA          TCCCACAG AGAGATATG CGGTGGGA          TAATGTTCGGCCAGA  41 277
CTM43_RS16200 3289230 .. 3289251 +  -3.7  -3.53444   GGCGGACCGATCGCG           GCATGATAT AAAC ATAGCGTGC            TTTGGCCCGCCGTCG  50 70
CTM43_RS16205 3289628 .. 3289666 +  -8.8  -3.42459   CTCTTTCGATTATCG  CCCGGCGGCGCTTCGCT AGTCCG GGCG-AGCGTTTCCGGG   TTCATATTCTGCATG  64 128
CTM43_RS16215 NONE
CTM43_RS16220 NONE
CTM43_RS16225 3291621 .. 3291642 + -17.3  -4.45544   TGAAGGCGAAAAAAA           GCGGGAGCC CATC GGCTCCCGC            TTTTACTTAATCCAC 100 253
CTM43_RS16260 3299630 .. 3299649 + -13.6   -3.3452   AACTAATAATAAAAA            CGGGAACC ACCA GGTTCCCG             TTCTGACATAATCTG  91 99
        rluE NONE
CTM43_RS16275 NONE
        mnmA NONE
        hflD NONE
CTM43_RS16290 3305531 .. 3305559 + -17.5  -4.36914   CTGAAGTAATCGCCC        AGCCCCTCTTTCC GCC GGAAAGAGGGGCG        TTTTATCGCCGGAAA 100 32
        phoP NONE
        phoQ 3309276 .. 3309295 +  -3.4  -2.61727   ATTTTTCACGGCGCC            TGCATCGC CAGG GCGCCGCA             TCCGTTATAATCCCT  42 49
CTM43_RS16315 3310542 .. 3310560 +  -5.9  -3.28712   TAGGCCGGATAAGAC             GAAGCCG CCATC CGGCATC             TTGTCCGACACGCGG  57 108
        potA NONE
        potB NONE
        potC NONE
        potD 3315898 .. 3315932 +   -13  -4.01045   GGCCGTTAAGTTTAT     TATTAGTCGGGTAAAC GTT GTTTACCCGACTAACC     TATTTTTGCTAATCT 100 32
CTM43_RS16345 NONE
CTM43_RS16350 3317500 .. 3317512 +  -4.8  -3.33261   GCGCTCGGTTTTCTC                CAGC ATAAA GCTG                TTATGCACCTTGCCC  51 244
CTM43_RS16400 3329643 .. 3329654 +  -2.2  -2.62184   ACACAGGAATTTATT                TTGC AGGC GCAG                 TAATATAAAAGGGAC  39 11
CTM43_RS16405 3331060 .. 3331108 + -18.2  -3.27525   GTGACATCCTTGTCA GCAGCGCTGCCGGCGGCTGTGGGC TGC GCCC-TGGCTACCGGCAG-GCTGC TTCAGTTTACAGCGC 100 430
CTM43_RS16440 3339818 .. 3339839 + -10.2  -2.53015   GCCTGACTGGCAGGA           GATACGGC CCCGCT GCCGTATC            TCCCTTCCCACATAT  69 35
CTM43_RS16445 3340956 .. 3340971 + -11.8   -5.4505   GCACAAAACAAAAAA              CCCGCC TGAT GGCGGG               TTTTTTGTTGGCAAG 100 50
CTM43_RS16455 3342209 .. 3342241 +  -6.1  -2.93637   GAGTCCTGATGCGCC      CTGCTTCCGGCGGTA TTC TGCCGCCGGATCCGC      TCTCCTGTTGGCTTT  53 32
CTM43_RS16460 3345058 .. 3345096 +  -4.4  -4.50627   GACGACGATGAGTCA   CCGTGACATTGCGGCATT CCT GACGCGGCGTTTTCACGG   TTTCTTTAATCGGTG  70 448
CTM43_RS16575 3364409 .. 3364432 +  -2.3  -4.08853   GAGGCAAAAAAAACG          GCGGAACTG ATTCCG CCGTTGCGC           TTATTTGCTCTTCCG  55 39
CTM43_RS16590 3369338 .. 3369352 + -12.8  -5.63504   TGCTTAATAAAAAAA               CCGGCC TTT GGCCGG               TTTTTTTATGCGCTT 100 44
CTM43_RS16600 3371624 .. 3371650 + -23.8  -4.85599   GCATCATAAAAAAAA         CCCCGCTTCGCC TGA GGCGAAGCGGGG         TTTTTCTACCCTCAC 100 32
        mdtH 3376914 .. 3376946 +  -8.2  -4.04209   TCTGCCTCCGGTATG      CTGGAGCCGCGCAC CTGAT GCGCGCGGCGGCGG      TTTCTCCTGCTTTCA  76 8
CTM43_RS16630 3377608 .. 3377631 + -12.4   -5.0133   CTTTACCAATTAATC          TCCAGGGCGC TACG GCGCCCTGAA           TTTTTTACGGAAATG 100 28
CTM43_RS16635 NONE
CTM43_RS16640 3379115 .. 3379127 +  -4.8   -3.7791   GAAGCATGGCGGGAT                CCAG TTACT CTGG                TTTGCTCCCTCATTG  57 39
CTM43_RS16645 NONE
        bssS 3379691 .. 3379712 + -10.1  -3.11023   TTAACATTAAACTTA           ACAGGCACC TGCG GGTGCCTGA            ATTATTTTCGGGCTT  73 58
CTM43_RS16655 3380937 .. 3380954 + -12.7  -3.27298   CGTTGGGTAAAGAAA             CGGCCTC TGCT GAGGCCG              TTAGTGATTGAGAGC  87 60
CTM43_RS16660 3381091 .. 3381111 +  -7.5  -3.92324   TGGTTTTTCTGACGG            CTCCGGGTC GAG GATCCCGAG            TTTGGTATTCAGCCG  69 29
        lpxL NONE
        mdtG 3384706 .. 3384732 +  -2.4  -3.79113   GTGCGTACCGCCTTC         TATAGATTGAAT CGT GTTCAATTCATA         TTCTTCTCAGGAGAT  52 70
CTM43_RS16685 3385396 .. 3385415 + -12.2  -4.42238   TTTCAGATAAAAAAA            TACCGGCA TCGC TGCCGGTA             TTTTCCTTAACGTAC  95 282
        mdoC 3390932 .. 3390954 + -15.6  -3.38272   CTAACCACTAGCCTG           TGCGGCACGC CAG GCGTGCCGTA           TTATGCCTGCTCGTC 100 37
CTM43_RS16745 3395589 .. 3395608 +   -10  -5.79526   CATATTTTAAGAAGA            GCTCGTAC GCAA GTACGGGC             TTTTTTTTCGCATGT 100 39
CTM43_RS16750 3396979 .. 3397010 +  -6.6  -3.05384   GTAAGACGAAATCCA      GGAGCCAGA-CGACA GAG TTTAGCTCTGGCTCC      TTGCATAAAAGCGCG  55 37
CTM43_RS16755 NONE
CTM43_RS16765 NONE
CTM43_RS16770 3400408 .. 3400430 + -16.3  -2.89081   AGCGCTAAAACGCCC           GCCCCGCTG AGCCG CAGCGGGGC           ATTGTTCATTGCGTG 100 33
CTM43_RS16775 3400646 .. 3400669 + -13.2  -5.26907   CCATATTCGAGATGA          GAGCCTGTAC GCAA GTACGGGCTC           TTTTCTTTTATATTC 100 38
CTM43_RS16800 3407312 .. 3407331 + -16.4  -3.73224   GTGCTGTAAAACAAA            CGGCGGGG CTGC CCCCGCCG             TTTACTCAGAACTGC 100 32
CTM43_RS16815 3413946 .. 3413963 + -12.7  -5.24129   GCTGTGTTTAATTAA             GGCTCCC GGAC GGGAGCC              TTTTTTATGGGAGCA 100 173
CTM43_RS16820 3414575 .. 3414591 +  -2.1  -4.72272   CCGCGGTCGATCCAG              CCGGAGA CTA TCGCCGA              TTTTTCGTCGACCAG  70 221
CTM43_RS16830 NONE
CTM43_RS16835 NONE
        rutC NONE
        rutD NONE
CTM43_RS16850 NONE
        rutF NONE
        rutG 3420928 .. 3420945 +  -2.7  -2.52464   GTCAGCACCGGCAGT             TTCAGCA ACAA TGGTGAA              TAAATTAACGGCAGG  40 232
CTM43_RS16875 3423413 .. 3423430 +  -4.1  -2.80074   CATGTCGCCAAACTG             GCCGT TAAACTGC ACGGC              TAATCTTCTGCAGGA  45 5
CTM43_RS16880 3423725 .. 3423740 + -10.4  -5.73672   AACCTGCTAAAAAAA              CCCGGA GTAC TCCGGG               TTTTTTTCGTTATTT 100 69
CTM43_RS16890 3425643 .. 3425696 + -15.1   -4.0896   AAGTCCTGGCAAAAT GGTTGCATTATTAAACCTAATATC TCATGCT GA-ATTTGGTTTAATAATGCAACC TTTTACGAGGCATTT 100 69
CTM43_RS16895 3426675 .. 3426732 +  -3.4  -4.79352   CTCGCCTGACGTTCA CTTTCAGCCTGACTG-GCGAAG-GCAGAC AGC GCCAACGCTACGCCCAG-CAGGCTGAGGG TTTTCTTATACATGA  73 197
CTM43_RS16905 3427195 .. 3427222 + -15.6  -3.33711   TTACCGAAGCCAAAA        CGAAAGCAGGCC TGCG GGCCTGCCTTCG         TTCAGTTTATGCCTC 100 96
CTM43_RS16925 NONE
        puuR 3431978 .. 3431996 + -13.2  -3.34522   CATTCTGATTATTTC             GCCTGAAC GAG GTTCAGGC             TTACTTCAGGCCTGT  91 33
        puuC NONE
CTM43_RS16940 3435504 .. 3435535 +  -7.2  -3.07443   AGGCGCAGAGTACGC      GGTGATTGGCCGCC AGCT GGCGGGCAATCAGA       TTCGGTGCGATATCG  54 468
CTM43_RS16950 3437403 .. 3437426 +  -2.3  -4.34737   CCCCACGATTGACAA          GTGAACCGC ATCACA GCGGTGAAC           TTTATTAATTCCTGA  61 240
CTM43_RS16955 NONE
CTM43_RS16960 NONE
CTM43_RS16965 3441887 .. 3441915 + -16.8  -5.16237   GTTGTAAATGTGCTC       TCCCGGCGATGGC GCTA GCCA-CGCCGGGA        TTTTTTAATGGAGTT 100 34
CTM43_RS16970 3442991 .. 3443005 +  -4.2  -3.21416   GACGAGGTCAGTGGC               GCGGAT ACT ATCGGC               TTCATCCTCCGCCTG  48 115
CTM43_RS16980 NONE
CTM43_RS16985 3444325 .. 3444352 + -14.3  -4.52589   GACCGGACAAAGCAA        GAAGGGGTTAC ATTTCG GTAACCCCTTC         TTTTATATGGCGGAA 100 212
        yccA 3447169 .. 3447188 + -12.8  -6.15828   CCCCTGCTTAACAGA            GGCCTCGC TTAT GCGGGGCC             TTTTTTTTTGCTACA 100 46
        tusE 3447874 .. 3447884 +  -5.4  -4.42653   GTTCACCTGTTTATC                 GCTT TAG AAGC                 TTTTATCAATGACAT  69 333
CTM43_RS17015 NONE
CTM43_RS17020 3450164 .. 3450176 +  -3.4  -2.57132   CAGATAAATTTTTAG                GTGT GCCTA ACAC                GTTCTAAGAGGGAAA  42 6
CTM43_RS17025 3451882 .. 3451906 + -12.9   -4.9725   CAGTAATGTAGTAAA          TGGCCCGAG AATAAAC CTCGGGCCA          TTTTTCTATAAAAGT 100 35
CTM43_RS17060 NONE
CTM43_RS17065 3458674 .. 3458708 +   -13  -4.32034   CCGCGCCTTCGCAAC     TAAAACAAAACCCCGC CAG GCGGGGTTTTTTGTTA     TTTTGCTAATCCTAG 100 23
        mgsA 3460166 .. 3460191 +  -2.5  -4.85599   GAAGATCGTCCAGCT         TGTCGTCG-GCT AAC AGCGTGACGGCC         TTTTTATCACCTGCC  70 459
CTM43_RS17085 NONE
        yccS 3464780 .. 3464800 +  -3.2  -4.18506   GGTAAATCCTTCAGG           CGGCCCGAC GCCC GTCGG-CAG            TTCTTTTCGCGCTGC  60 283
CTM43_RS17100 NONE
        sulA 3466025 .. 3466043 +  -3.1  -5.38321   TGGAATTTTTTTTAC             CGCTG GGAAAGGTA CAGCG             TTTTTTATGGTCTTT  80 60
CTM43_RS17110 3467433 .. 3467446 +  -9.5  -5.94713   TAACCGATAAAAAAA               CCCGC TTCG GCGGG                TTTTTTTTATGCCCT 100 45
CTM43_RS17120 3469954 .. 3469969 +  -3.2  -2.80816   GATCGGACTTGTTCA              GCTTAC ACGT GTTAGC               TATCCTGCGTCCCGA  43 39
CTM43_RS17125 3470554 .. 3470578 + -15.7  -5.00616   TAGCGATTAAAAGGC          GAAGCCCCCGC TAT GCGGAGGCTTC          TTTTTTAAAGAGACA 100 51
CTM43_RS17160 3479737 .. 3479776 + -12.2  -2.84344   TTAAACCGCCTGCCC  CAGACTGTAGCTGACCGCG CTC TGCGC-CGGCTGCAGTCTG  TCATTCATAATTTTA  80 37
CTM43_RS17175 NONE
CTM43_RS17180 NONE
        ssuD NONE
        ssuC NONE
CTM43_RS17195 3486097 .. 3486130 + -10.2  -2.57881   CACGCTAACGGGTAA     CCCGGACAG-GGCGC AAGGC GCGCCGCAATCCGGG     GTTATGGCACCGTTA  69 184
        pncB 3490530 .. 3490548 +  -5.3  -2.57564   CCGAAATCATCATCT            GTGCGACG TTGC CGTC-CAC             CTTCTCAGCCCCTAC  46 268
CTM43_RS17230 3496208 .. 3496220 +  -2.6  -3.81557   TGGGGAGCCAAAGAA                CGCC CCGGA GGTG                TATTTATTTCCGAAA  54 59
CTM43_RS17235 3497774 .. 3497791 + -12.7  -5.72616   GACATCAATCTGAAA             GGCCAGC GCAA GCTGGCC              TTTTTTTATGTCAAT 100 49
CTM43_RS17240 3499456 .. 3499473 + -11.3   -4.6955   TGATATGCCTTCAAA             GCAGGAC TTCG GTCCTGC              TTTTCTGTATTCGTG 100 60
CTM43_RS17245 3500826 .. 3500841 + -11.8  -5.47431   CGGTATAAAGAAAAA              GGCCGC GAAT GCGGCC               TTTTTTATGTGTTCG 100 52
        elyC 3512669 .. 3512704 + -17.6  -3.21747   GTAGCGCCACAGCAG    CTGTTCCGCCTGGCCG CCTT CAGCAAGGCGGAACAG     TTCATACTCGCGTGG  93 167
CTM43_RS17355 3529378 .. 3529397 + -10.7  -3.92542   CGTTAATGCTTACAA            CGGAGCC CTCAGC GGCTCCG             TTATTTAACCCTGAG  85 57
        focA 3530619 .. 3530636 +    -2   -3.1247   AGTAAATAAAAAATC             CACTTA AGAAGG TAGGTG              TTACATGTCCGAGCT  43 55
        pflB 3532956 .. 3532975 +   -15  -4.57341   AAGGCGTACAATAAA            GGCCCCAC ATCA GTGGGGCC             TTTTTAACAAGCATT 100 58
CTM43_RS17370 3533895 .. 3533923 +  -6.6  -4.02108   TATGCCGGCCTGCAA       CGGCGTGG-GAAG CTGT CTCCGCCCCGCCG        TTTCATTCTCATGAA  68 65
CTM43_RS17425 3549529 .. 3549545 +  -9.4  -4.91852   AACAAAGGTAAAGAA              GGCGAC GAAAA GTCGCC              TTTATTTTTGCTGCG 100 56
        cydD NONE
        cydC NONE
CTM43_RS17440 3553994 .. 3554008 +  -9.2  -2.87211   CGTTTGCGCCTGTCA               CGCGGC ATG GCCGTG               TGTGTCCCGGGCAAT  65 172
CTM43_RS17445 3554452 .. 3554471 + -11.4  -4.61873   GCGTCAGATGCTGAA            GGCCGGGA TAAT TCCCGGTC             TTTTCATTTCTGCCG 100 58
        cspD 3557750 .. 3557770 + -11.2  -5.38054   ATCCTGCTAATAAAA            TGCCAGTC CTTCT GACTGGCA            TTTTTATTTCTCGCC 100 62
CTM43_RS17480 3563774 .. 3563789 + -11.8  -5.38054   TTAACGCTTTTCAAA              GCCCGG GTCT CCGGGC               TTTTTCTTTCTGGCG 100 37
CTM43_RS17485 3564785 .. 3564809 + -11.4  -2.76492   CCGCCTGAGCACCCG          CTGGCGGCAG CCCTC CTGCCGCCAA          ATTTGCGCTAAATCA  76 33
CTM43_RS17490 NONE
CTM43_RS17495 NONE
CTM43_RS17500 3568205 .. 3568220 +  -3.3  -2.73067   TTTAACCATTTGATG              TGCAA CCTGTT TTGCA               TCCTGTGTACTTCCA  42 524
CTM43_RS17510 NONE
CTM43_RS17515 NONE
CTM43_RS17520 3572556 .. 3572570 +  -3.6  -3.87346   TCAGGCAGAGTCGAA               GGATAA GCG TTATTC               TTTCATGATTCTCAT  55 20
CTM43_RS17525 3573925 .. 3573935 +  -6.8  -3.01791   AGGCGCCGATCCCCT                 GCTG CGC CAGC                 TGTTGCCAGGGGAAT  53 288
CTM43_RS17540 3576319 .. 3576329 +    -4  -3.82963   AGCCATTTCCCTATT                 TTAC GGG GTAA                 TATTTCTTGTTCACG  57 452
CTM43_RS17545 3577099 .. 3577127 +  -9.7  -3.53444   ATAACCCCGGTAAAA        TGTCGGTATTC GCCCCAG GAATGCCGACA        TTTGCGCCCCCCTCA  74 71
        artP NONE
CTM43_RS17555 NONE
        artQ NONE
        artM 3580186 .. 3580212 +  -8.7  -5.61596   AAAAGCAAACAGCAA         GGCGGACAAGT CTAAC ACCTGTCCGTC         TTTTTTTATGACGAT 100 60
CTM43_RS17570 3581117 .. 3581148 +  -7.3  -3.87815   ACCGCTCTTCCACGT     TGGCCGGGTAAGGCG TAGC CGCC--ACCCGGCGA      TTTCTCAAAGTGGCA  69 76
CTM43_RS17635 3593029 .. 3593043 +  -3.4  -3.88498   CTCCGGGTTGCCGCT               GGCGCG AAA TGCCCC               TTTCATATGTAACAA  55 314
CTM43_RS17645 3595181 .. 3595217 +  -4.4   -5.4833   CCCCATTTTGTGGAG   CCCATCAACCCCGCCAC TTCG GTT-CAAGGTTGATGGG    TTTTTTGTTGCCTGG  83 124
CTM43_RS17655 NONE
CTM43_RS17660 3597133 .. 3597151 +  -8.8  -3.35679   CTGCTCCAGCGTCTG             CTGGCTGC GCC GCATCCAG             TTCTGCATCACCGCC  64 363
CTM43_RS17670 NONE
CTM43_RS17675 NONE
CTM43_RS17685 NONE
CTM43_RS17690 3601878 .. 3601899 + -11.5  -4.07568   GGTAAAATCCCGCTA           ACGCCCTGC CCCC GCAGGGCGA            TTTTAGCGCAGAGGG  91 87
        deoR 3602742 .. 3602790 +  -2.2  -3.64716   GCTGCCAAACCAGCC GTGCAGTTTCATCAGCACGAAG TCGAT CATCCGGCTGAAGAAGCCGCCC TCTTTTACCGACTCC  51 91
CTM43_RS17705 3607143 .. 3607157 +  -5.6   -4.4518   CATACAGGGGAGGTT               CGGTCC CCG GAACCG               TTTTGCCTTTTGCTT  72 312
CTM43_RS17720 3610107 .. 3610135 +    -3  -3.29263   CTGCCCGGCAGCCAC       GCCGGGCTTG-AG CCGC CTGCGCGCACGGC        TTGTCAGAAGCGTGT  47 45
        rimO 3611914 .. 3611927 +  -3.7  -3.63744   CAGGCCGCATGGATG               CGGGC TGAG GGCCG                TGTTTTGCACGGACG  53 294
CTM43_RS17760 NONE
        moeB 3620830 .. 3620855 + -14.7  -4.38154   CTCGCACTGACCCTC         ACACCGGCGAC GAGA GTCGCCGGTGG          TTTTGTGACCGCTCT 100 31
CTM43_RS17770 NONE
CTM43_RS17775 3624379 .. 3624391 +  -4.8  -4.42386   AGGCCGGAAAAGACA                TGCC CTTCC GGCA                TTTTCTGAATGCGCG  67 89
CTM43_RS17780 3625315 .. 3625333 + -13.1   -4.4595   ACGCCTGACCCTTCG             CCGGGGC ATCGC GCCCCGG             TTTTCCATTTTGTGC 100 33
CTM43_RS17785 3626829 .. 3626876 +  -6.9  -3.14132   GCCGTGCGGCGCCTC CGGGCGCAGC-AGGCGCTGCTGC AGGA GATGCACCGCCTCGCTGC-CCAG TTCATCCCGCGGCAC  54 142
CTM43_RS17795 NONE
CTM43_RS17800 3632002 .. 3632012 +  -6.8  -2.55551   TGGCCGCCAAAATCG                 CCAC TTC GTGG                 TACCTTCGACTTATC  52 266
CTM43_RS17815 NONE
CTM43_RS17820 3635986 .. 3636006 + -15.4  -5.61596   GCATGACAAGAAAAA            CGGCGGGC CTGAT GCCCGCCG            TTTTTTTATCGGCAT 100 46
        mntS 3640334 .. 3640361 +  -7.7  -5.07941   GGCAAACCCAATTCC        TAAGGCGGCGT CGCGGT ACGCCGCTTCA         TTTTTCTGTCATTTT  90 23
CTM43_RS17850 3642237 .. 3642254 +  -8.4   -4.8048   AGCAGGCAAAAAAAA             TCCGCC CCGAGA GGCGGA              TTTTTCATATCACCG  88 77
        rhtA NONE
CTM43_RS17865 3644788 .. 3644809 +  -2.1  -3.92373   TTGCCGCCGGCCCAG           CGCGGTCGGC GGC GCCT-CAGCG           TTTCTCCCTGCCCTA  52 45
        glnH 3646008 .. 3646019 +  -5.8  -2.62263   GACGGTATTTTGGCG                GAGG CTTT CCTC                 TGCTCTCGACACGGT  51 110
        glnP 3646692 .. 3646703 +  -4.4  -2.95448   GTCGTCTTGAAAGAA                GGAT GAAA ATCC                 TGTGATTGAATTTAA  47 9
        glnQ 3647434 .. 3647462 +  -5.3  -4.10161   GTCGCCTGACCCACA       ACGGCTCTC-TC CCCCAC GATGAGAGCCGC        TTTTCCAGAATCCTC  64 32
CTM43_RS17885 3650148 .. 3650162 +  -4.2  -4.56597   GATCACGCCGTGAAA               GATAGC CTG GCTCTC               TTTTTGCCGGCGCAG  70 439
CTM43_RS17895 NONE
CTM43_RS17900 NONE
CTM43_RS17905 3652031 .. 3652055 +  -4.9  -3.74347   TCGTCGCGGCTCCAA          GGATAGCCAGC TAC GTTGACTTTCC          TTTACCGTTTATGAC  57 7
CTM43_RS17910 3652658 .. 3652681 + -15.3   -5.9873   TAATACCCTTGCCTT          GCCCGTCCG AGCCAC CGGACGGGC           TTTTTTTTATCCTGC 100 88
CTM43_RS17950 3662977 .. 3662998 +  -8.9  -4.07568   CAGTCGGCGCCTAAA           GTTAATCAA TCGA TTGATTAAC            TTTTACCGAGCGCGA  78 63
CTM43_RS17955 NONE
        hlyD NONE
CTM43_RS17965 NONE
CTM43_RS17970 3667614 .. 3667625 +  -3.6  -2.75064   GCCGGGCAAACGCAG                TGCC GCCC GGCG                 TGGTTGAATGGGCCA  43 117
CTM43_RS17975 3668804 .. 3668837 +  -9.5  -3.09933   TGGCTTTCCTTACTC     ACCCCAGTCGCATAG TTAT CTATGCTTCTGGGGA      TTCGCTGCGTTGCCG  70 71
CTM43_RS17985 3670141 .. 3670153 +  -4.9  -2.70932   CTTAGCGTGGAGATA                CATTT GTG AAATG                TCGTTGGCAGGAAGG  46 17
        clsB NONE
CTM43_RS17995 3672692 .. 3672702 +  -3.2  -2.69151   CCCGGCAATACCACG                 GGTA CCG TGCC                 TGATATCTCGCCCGG  42 365
CTM43_RS18030 NONE
        yvcK 3677861 .. 3677876 +  -6.2  -3.67611   GCCCTCTTCGGCGCA              CCTTAA AATC TTAAGG               TTGTCTTAAAATAGG  61 59
        eptA NONE
CTM43_RS18045 NONE
        pmrB 3681478 .. 3681492 + -12.8  -5.55769   AGCAAACATTAAGAA               GGCCGC AAC GCGGCC               TTTTTTCTTCTCAAA 100 159
CTM43_RS18065 NONE
CTM43_RS18070 NONE
CTM43_RS18075 3684231 .. 3684241 +  -4.6  -5.40474   GGCCCGATGGTATCG                 GCGT TTA GCGC                 TTTTTTTCCGAGCGT  85 18
CTM43_RS18080 3685220 .. 3685243 +  -6.6  -3.14136   GCGGTAGTCCCGCCT          GGCGTACCGC CTGA GCGGTAAGCA           TTGCGTGGTTGATAC  57 197
CTM43_RS18105 3690163 .. 3690176 +  -2.4  -4.24342   GAATTGCGTCGTCGG               GAAG GCTACA CTTC                TTTGTTAATCAGCGC  57 47
CTM43_RS18110 3690822 .. 3690837 +  -3.2  -4.36914   CGCCGGGCGATTGCC              GCGG GCACGGAG CCGC               TTTTATGCCGGGCGG  63 159
CTM43_RS18150 3701021 .. 3701038 + -12.7  -5.34655   TTGTCGTCAGCCAGA             GAGGGGG CATG CCCCCTC              TTTTCTTTTTCGTTC 100 251
CTM43_RS18165 NONE
CTM43_RS18170 NONE
CTM43_RS18175 3710323 .. 3710343 +  -2.5  -3.23899   TGGTAAACATAGGAA            CCGGTATTC ACC GAATAGAGG            TTAAGTTCGTTCGCC  44 463
CTM43_RS18185 3711361 .. 3711409 +  -3.2  -3.00022   TCATCATTAAATAAA CCCA-CTGTGCTGG--CAGCAGG CTTCGA CCTGCTGTACCGGCGCGCCTGGG TCTCTATCGGCTAAC  45 31
CTM43_RS18190 3712003 .. 3712031 + -12.4  -2.80091   GTAACCCAGCACTCA        AGCCCTGATCCG CACCA CGGATCGGGGCG        CTTAATTTTGGCCGT  80 37
CTM43_RS18205 3714715 .. 3714759 +  -4.1  -2.52464   CCAGGAATAACGTCA TCGATCGTCGCCTGTTGCAGC GCC GCAGTAGCAGATGAGGGGCGA TCGCTTCCACAAACC  44 31
CTM43_RS18210 NONE
CTM43_RS18215 3715530 .. 3715545 + -10.4  -5.80951   TCTGAGCAAAAAAAA              CCTCGC TAAG GCGAGG               TTTTTTCTTTTACCT 100 96
CTM43_RS18225 3718085 .. 3718097 +  -3.3  -2.78463   ACCAGCACACGATCG                GCCAG ATG CTGGA                TCTCATCCAGCGAGT  41 498
CTM43_RS18250 NONE
        modF 3722917 .. 3722942 + -11.9  -4.57073   TGGCCTGACGCCCCC         TGCCGGGGATC GAAA GATCCCTGGTA          TTTTTCAGAAAAATA 100 33
        galE NONE
        galT NONE
CTM43_RS18270 NONE
        galM 3727383 .. 3727409 + -11.5  -4.25104   ATCGCCCGATAATCG         CCAGCGCCCTC CATCA GGGGGCGCTGC         TTTTCGTCCCCGCCC  91 29
CTM43_RS18280 3728447 .. 3728464 + -11.3    -5.626   GGTGAGAACAAAAAA             GCGTGGA AATC TCCACGC              TTTTTTTATGACCTG 100 49
CTM43_RS18290 3730248 .. 3730282 + -21.7  -5.29782   ATGAGGTGGGCAGAT     CGAAGAAAAGGCGAG CCGGT CTCGCCTTTTCTTCG     TTTTTTATCGCTCTC 100 44
        zitB 3731336 .. 3731375 +  -4.9  -3.01924   CGCGCTGTTTATCCA  CATCCGGCTGCCGTTCA ACGCAA TGAACGTCAGCAAGAGG   TATTCCAGCGACATG  47 70
CTM43_RS18425 3746949 .. 3746966 +  -7.7  -3.74872   CTCTACCTTGCCATT             GACCG-CC ATC GGACGGTC             TTTAATGGCATGCAT  68 70
        gltA 3756426 .. 3756441 + -11.8  -5.64274   TCCGGATCATAAAAA              CGCGCC TGCT GGCGCG               TTTTTTTATGCCTGA 100 49
CTM43_RS18505 3764579 .. 3764605 + -14.4  -2.78463   GTGGAGTAATTCCTT         TTCTGGCGGCCT CCC AGGCCGCCAGCG         TCTCCTGCCGCGCCT  80 32
CTM43_RS18520 NONE
        kdpA 3768457 .. 3768469 +  -3.3   -2.5474   TTCCTTACTTTGAGC                GATGC GGA GCACC                CTGTTATGAGTCGCA  42 28
CTM43_RS18530 3770502 .. 3770515 +  -3.8  -2.62184   CATCGACCTGCTGCT               GACC CTGAGT GGTC                TGGTGTGAGGAACAA  44 4
        kdpC NONE
        kdbD NONE
        kdpE 3774473 .. 3774502 +  -5.1  -4.11484   GCTTTATGCCCTGAA      TC-CC-GCCTCTG CAGTAC CAGAGGCTGGCGA       TTTTCAGCCCTTCAG  64 27
CTM43_RS18565 3778209 .. 3778230 +  -5.1  -3.90922   GATGGCGCGCTATCT           GC-GCCGG CTAGAGC CCGGCAGC           TTGTTTCCCCGAAGT  61 111
CTM43_RS18570 3778588 .. 3778605 +  -4.1  -3.34894   CATGTAGCAGAGTGT             GCAGTCG GGCG TGATTGC              TGTTTCCGCGCCCTT  50 63
CTM43_RS18575 3779348 .. 3779382 +  -4.8  -4.56597   TGTCCTCTGATTCTA     CGAGGCACGTGACGCA GTT TGTAGCTGGTGCCTCG     TTTTTGACAGCAAAC  71 141
CTM43_RS18580 3780002 .. 3780019 + -11.3  -5.24129   CGCTGAGACTGAAAA             GCCAACC TGCC GGTTGGC              TTTTTTATGGGCGCC 100 51
CTM43_RS18600 3782775 .. 3782793 + -10.2  -3.53012   TCTGAAACAAAAAAA             GCGCCGCT GGG AGCGACGC             TTTGACAGAAAAGAA  77 42
CTM43_RS18615 3787738 .. 3787757 +   -15  -3.11568   CTGTAATGTAGTCCT            TCCCGCGC CCTG GCGCGGGA             TCATCTTTTTCTTTG  91 35
CTM43_RS18620 NONE
CTM43_RS18625 NONE
CTM43_RS18630 3791095 .. 3791112 + -11.3  -5.04601   ATTTTCTGATGCCAA             CCACGTC GCAG GACGTGG              TTTTTCATTTCTAGC 100 32
CTM43_RS18635 3793053 .. 3793080 + -12.8  -4.60924   ACGGGCGGTGAAACG        CAAAACGGACCC TCCG GGGTCCGTTTTC         TTTTTGCCGGATTTA 100 47
CTM43_RS18645 NONE
CTM43_RS18650 NONE
CTM43_RS18655 NONE
CTM43_RS18660 NONE
CTM43_RS18665 NONE
CTM43_RS18670 3793879 .. 3793899 +  -4.8  -3.05844   CAGCCAAATTTAAAA           GT-CGTTCA GCAG TGAACGCAC            TGTTGCCCTCAACCG  49 35
CTM43_RS18675 3794027 .. 3794058 + -16.8  -3.07043   CCCAGCCACTTCAAT      GCAAAAAAGCTCAC TTCG GTGGGCTTTTTTGC       TATTGGCGTCCTGAC 100 33
        miaB 3796927 .. 3796948 + -13.7  -3.55889   GCCATGATCCCTTCA           GGCCTGTCG GTTC CGGCAGGCC            TTGTAATTCCTCTCT  91 34
CTM43_RS18690 NONE
CTM43_RS18695 3798593 .. 3798627 + -10.7  -2.75876   TTGCGGAATAGCGCC    CAGCCGGATGGCGGTG CTTG CGCC-TCATCCGGCCG     CTGTTTCTGCGTTTT  74 30
        corC 3799698 .. 3799713 +  -6.8  -2.60075   CTGGCAAAAAGAATA              GCCTGT AGCA GCAGGC               GTTAATTAACGGGAC  53 109
CTM43_RS18705 3801287 .. 3801308 + -17.3  -5.08601   CCGATAAGTTTCTCC           GCCGGCGAC GCCC GTCGCCGGC            TTTTTCTTCCCATCA 100 34
CTM43_RS18710 3802670 .. 3802687 + -11.3  -5.75342   GACAACCGTCTTCGA             GGGTAGC ACTG GCTACCC              TTTTTTTTCCAGGAG 100 151
CTM43_RS18715 NONE
        gltK NONE
CTM43_RS18725 3804859 .. 3804884 + -17.7  -3.53779   ATTAATGGTTTTTCT         CTGCGCATACC GCCC GGTATGCGCAG          TTAATCTTTTCCGCC 100 36
CTM43_RS18730 NONE
CTM43_RS18735 3808761 .. 3808784 + -16.8  -4.58283   AAATAAGACAAACCA          CGATGCGCGA AGCC TCGCGCATCG           TTTTTCGCACGCTTA 100 35
        leuS NONE
        lptE 3812682 .. 3812701 +  -2.8  -3.28712   CGCGTCTCCACCACG            CTGGGTCA ATGA TGATTCGG             TTGTACCCGGAACAG  47 14
CTM43_RS18755 NONE
CTM43_RS18760 3814384 .. 3814398 +  -4.2  -2.78596   CCCAGGCTGGGCCTG               GCGC GAAAAAA GCGC               TATCGTAACGCCATC  45 42
CTM43_RS18765 3815111 .. 3815123 +  -4.7  -3.56366   GCTGCCAGGCAGCAT                CCGCC AAA GCCGG                TTTGCAGAAATTGTT  55 67
CTM43_RS18770 NONE
        rlmH NONE
CTM43_RS18780 NONE
        rodA NONE
        rlpA 3820398 .. 3820411 +  -3.1  -3.31144   CTTTTTTAACTCCAT               C-ACGG ATG CCGTTG               TTCTGACCATGAAGA  47 142
CTM43_RS18795 3821677 .. 3821707 + -15.6  -4.46212   TTCATCCAAGTAACC       TGATAACTCCCGCC CTT GGTGGGAGTTATTA       TTTTGTCGTAACACC 100 83
CTM43_RS18800 3822006 .. 3822027 +   -13  -3.54511   TGTAACCTTTTCCCT           GACCCGGC CGCCGT GCCGGGTC            TTCTCATTCCCTTCT  89 36
        lipB 3822783 .. 3822793 +  -2.4  -4.42748   CAGCGGGGCGCTAAA                 CGAG TAA CACG                 TTATTTTTGCAATCA  61 64
CTM43_RS18810 3823881 .. 3823906 +  -5.3  -4.22652   TATTTTACAATTTGC         TGGGCAGGCAG GCTG CTTTCTGCCCC          TTTTCAATGGTATAC  66 72
        lipA 3824993 .. 3825021 + -14.6  -2.92157   TAACCCACCGCTTCC        GCCGCTGCGC GCCTGTTCG GCGCAGCGGC        TCTCTCCGCTTCATC  90 38
        crcB 3826907 .. 3826922 + -10.4  -5.16133   ACAGGCAAAAAAAAA              CCCGCT TATT AGCGGG               TTTTTATATTCTACT 100 52
        dcuC 3829602 .. 3829617 + -11.8  -5.42265   CTAACCACGCGAAAA              GGCGCC AGCG GGCGCC               TTTTTTATGCTTTAA 100 45
CTM43_RS18850 3830587 .. 3830608 +  -9.4  -5.07652   ATGGTAGGACCTTAA           CCCTTGCC CCTTTC GGCGAGGG            TTTTCTTTTACGGAC 100 140
CTM43_RS18855 3831095 .. 3831114 + -10.8  -4.13711   TTCGCGCTTTATTCA            GAGGATGT CCGC ACATCCTC             TTTCTGCTGTTTTCC  87 59
        uspG 3831702 .. 3831723 + -14.5  -4.31433   AAGAGTATAAAAAAA           GAGGCTACC CCTG GGTAGCCTC            TTTGTTATGCAGGTC 100 51
        dsbG 3835294 .. 3835308 +  -2.9  -2.54801   CGACGATAAGATATA               TTAAG CAGAA CTTAA               CTGTATTTGCCAATA  40 89
CTM43_RS18880 3836434 .. 3836451 +  -3.5  -2.75669   AACGGGAATTTTCTA             CTATTAA AGGA TTAATGG              TCATGTCGTTTATTA  43 116
CTM43_RS18885 NONE
CTM43_RS18890 3838315 .. 3838336 +  -7.2  -3.53012   ACAAACGCGTCGCCG           CAGCCAGC AGAGTC GCCGGCTG            TTTGGCGAAGCACAA  60 52
        mtnC NONE
CTM43_RS18905 3840835 .. 3840870 + -12.4  -3.30124   AGTCTAAAACCGCCA    GGCGCGGGCTTTGCCG GAGG CGGCGCATACCGCGCC     TTCTCCGGGCTACCC  85 56
CTM43_RS18915 NONE
CTM43_RS18920 NONE
CTM43_RS18925 NONE
CTM43_RS18930 NONE
CTM43_RS18935 3849251 .. 3849263 +  -7.7  -3.31461   TCCGGCGATATGCGG                CGTGA TAA TCACG                TTATCGAACTCGATG  59 179
CTM43_RS18955 NONE
CTM43_RS18960 NONE
CTM43_RS18965 3856522 .. 3856545 + -13.8  -3.14132   CAGGCAGTGTGCGTG          ACCGACGCCC GCCC GGGCGTCGGC           TTCCTGGAAAACAGA  88 84
CTM43_RS18970 3857620 .. 3857635 +  -8.2  -5.40072   CCGGCCACACTCATT              CGGCCC TTCG GGGCTG               TTTTTTTCACGCAAA 100 86
CTM43_RS18975 3858501 .. 3858515 +  -2.1  -3.57651   ATTAACCCTTACGGG               TCAGG CTATT TCTGA               TTATGTACTCTACAC  47 36
CTM43_RS18980 NONE
CTM43_RS18985 3861259 .. 3861313 + -10.7  -3.45054   CCTGCCGTAGCGGCG CGGTGTTTGT-CCGGGCCCGGGAAAA CCTT TTTTTCCAGGCCCGGCACGACGTCCG TTATCCGTTGTCCGG  79 31
CTM43_RS18995 3864052 .. 3864064 +  -3.3  -2.65264   ATCACCGATAGCCCG                CCGTT GTA ATCGG                TGCTGTAGATAATGC  40 434
CTM43_RS19020 3870315 .. 3870353 +  -9.5  -3.02459   CAGCCGTGGGTTGGG  TC-GCGCCATCGCGCTGTC GCT GGC-GCGCGCCGGCGCCGA  TGTGGTTATTACGTA  69 142
CTM43_RS19030 NONE
CTM43_RS19035 3872261 .. 3872272 +  -7.2  -4.25104   TATCCTCTTTCAGCG                CCGC CAGC GCGG                 TTTTAATCGAGAACA  71 422
CTM43_RS19075 3880953 .. 3880973 + -16.1  -2.71144   GCGCCCAGCCGCTGG            CGCTGGCGG ATG CCGCCGGCG            TCATTACCGCCCCTA  86 379
CTM43_RS19085 NONE
CTM43_RS19090 NONE
CTM43_RS19095 3885249 .. 3885263 +  -9.2  -2.70932   CCTTGCCGTCAAACT               TCGCGC TAT GCGCGG               TGGTTAACAGCCGCA  61 278
CTM43_RS19115 NONE
CTM43_RS19120 3892870 .. 3892887 +  -2.6  -3.35679   ACCTGAGCGTCAACA             CCCACT TCTGAT AGCGGG              TTCTCCCTCCCCCGC  47 15
        entD 3893576 .. 3893597 + -12.9  -3.52113   CGCGCCGTAAAAAAA           CCCGCGCGG CATT CCGCACGGG            TTATCGGTTTTAGAC  89 31
CTM43_RS19145 3896878 .. 3896889 +  -7.2  -3.97636   TGATTTTTCCGGTAG                CCCG TCAC CGGG                 TTTGTGGCTTAAGGT  71 198
CTM43_RS19150 3898642 .. 3898665 +  -3.8  -3.54424   CCATAACGATATCGC          TATCCCCGAA TACA TTAGGGGAAA           TTTCAGACCGTAAAA  52 92
CTM43_RS19155 3899682 .. 3899711 +    -5  -3.81488   CTGAGTTCGGGTGGT      TGCGC-CC-CTGCG GGGG CGCAGAGGAGAGCA       TTATGTTTAAGAAAA  59 37
CTM43_RS19160 NONE
CTM43_RS19165 NONE
CTM43_RS19170 NONE
CTM43_RS19175 NONE
CTM43_RS19180 3905231 .. 3905245 +  -8.5   -2.5934   ATGCACGGGAAGCAG               CCGGC GCCCG GCCGG               ATTGGTCGTTTCGAA  57 447
CTM43_RS19190 3906747 .. 3906759 +  -2.6  -4.37067   AATGTACTCAAATAT                CGCC GACTG GGTG                TTTTCGTAGTCTTTC  62 157
CTM43_RS19200 3908548 .. 3908576 + -13.1  -3.13164   CCAGTAACGACCATC        GCCCCCGTCAG CCTTTCC CCGACGGGGGC        TTCCCTGATTAGCCA  84 34
CTM43_RS19210 NONE
CTM43_RS19215 NONE
        betA 3914915 .. 3914928 +  -4.5   -4.7497   GCCAGACCGCTTCGG               TACCC AGCG GGGTG                TTTTTCATCCGTCGC  76 442
CTM43_RS19230 3917098 .. 3917115 +  -4.7  -2.68942   AAGTAAGCGGGTTTT             GTCACCG GGTA CGGCGGC              CTTGTCTGCCCGGAT  46 35
CTM43_RS19235 NONE
CTM43_RS19240 NONE
CTM43_RS19245 3919871 .. 3919887 +  -2.1  -2.61728   CCAGGACTTTACGGA              GACAGCC CAT GGCGATC              GTTAATCTTCAGGAT  39 4
CTM43_RS19250 3920587 .. 3920600 +  -3.7  -4.32067   CGGATGAGGTGAGGT               CAGCG GATG CGCGG                TTGTTTTGTCGGGTG  63 29
CTM43_RS19270 3925383 .. 3925400 +  -6.9  -3.90112   CACCACCATGGTGTA             GCCCTCG GCGG CAAGGGC              TTTCATTACCCCCAA  66 244
CTM43_RS19295 3930370 .. 3930384 +  -7.1  -3.90922   TATTTTTTGAAAATC               CGGTG ACATA CACCG               TTCTTTCCGGCGCAT  66 498
CTM43_RS19305 3932618 .. 3932633 +  -3.9  -3.13164   TCAGCATCGAACGGC              GCCGC CGGATA GTGGC               TTACCTGCTTCAGGG  45 382
CTM43_RS19340 NONE
CTM43_RS19345 3941573 .. 3941600 +  -4.7  -2.90392   TAAATTAACGACAGG        CCGGGCAAGGT ATTGCC GCCGTGCCCGA         TGTCCTTGCCCGGTG  47 82
CTM43_RS19365 3948943 .. 3948964 +  -6.7  -2.60244   ACAAGTCTAAATTTT           TCGCAAAAT AAAA ATTTTGTGA            TAAGTTAATTCCACA  53 15
CTM43_RS19370 3949586 .. 3949607 +  -9.3  -3.04334   CGGTAAACCAGGAGA           GGCGCGCCT CAGT GGGCGCGAC            TGTGGTTCTCTTTGC  66 35
CTM43_RS19385 NONE
CTM43_RS19390 3952223 .. 3952241 + -10.4  -4.63542   TGATTTTCAGCCAAA             TGCGATAA GTG TTATCGCA             TTTTTCACCCTTATC 100 38
CTM43_RS19395 3953002 .. 3953037 +  -9.7   -4.1552   CCTTCTGCCGGGAAC   G-CCCGGGCCATGGCGC AGCA GCGTC-TCGCCCGGGAC    TTTCTTCACCCACTC  83 44
CTM43_RS19400 NONE
CTM43_RS19405 NONE
CTM43_RS19410 NONE
CTM43_RS19415 3955724 .. 3955738 +  -3.4  -3.53091   TTGGCATGGCGGCCA               GCGCGC TAG GCCTGC               TTTAAGAAGAGGAAT  50 6
CTM43_RS19420 NONE
CTM43_RS19425 3957892 .. 3957914 + -11.9  -2.53911   GCTAACCGCCTGCCA           GCCCCGGCG TAATT CTCCGGGGC           TGCGTTGAGGATTAC  75 44
CTM43_RS19450 3964890 .. 3964914 +  -8.6  -3.02043   TTTGCATAATAGCTA          TCCAGCGG TCATCATAC CCGCTGGA          TATTCAGGAGACGTT  63 56
CTM43_RS19455 3966554 .. 3966566 +  -3.3  -4.37092   TACGCCAGACCGTGC                ACGTG CAG CACGC                TTTTATAGCCGCGCT  64 405
CTM43_RS19465 3967839 .. 3967880 +  -2.1  -4.11394   TCCTGCGCCCCACCT GCGCTCAGCGTTCGACGCTG ACC CAGCG-CTGCTGCTGATGGC TTTTGACGATCGCCT  55 41
CTM43_RS19505 NONE
CTM43_RS19510 3980204 .. 3980224 + -11.1  -3.62695   ACGTGGCAAGACGGA            TGGCCCCGG TTT TCGGGGTCA            TATTGTTTATCCGCC  81 258
CTM43_RS19515 NONE
CTM43_RS19520 3982690 .. 3982708 +  -3.7  -3.44146   CAAAAAAATCCCCTT             CCGGCGT GTCCG GCGCAGG             TTCATTATCAAAAAA  49 306
CTM43_RS19550 NONE
CTM43_RS19555 NONE
CTM43_RS19560 3990561 .. 3990579 +  -2.4  -3.87815   CTGTTCAGGAGCCCC             TATGACTT CAG AAGCCGTA             TTTATCCAGGTCGGC  52 50
CTM43_RS19565 3991356 .. 3991373 +  -2.5  -3.53012   CCATCAGGAATAGTA             GGGCGCC GCCG GGCACGC              TTTCAGGCACCGCAC  47 28
CTM43_RS19570 3992110 .. 3992134 +  -9.9  -3.05596   CATGTATAGCCTTCC          CCCCTCTCCCC GCC GGGAAGAGGGA          TTGCCTCAGGCGCTG  69 447
CTM43_RS19605 NONE
CTM43_RS19610 NONE
CTM43_RS19615 3999998 .. 4000039 + -20.8  -3.21416   TGGACAGCGAGGCCT GACCGC-GGCGCGGGGCGG TTCGT CCGCCCCGCGCCCGCCGGC TTAGTGATCGAGATA 100 24
CTM43_RS19635 4003472 .. 4003490 + -11.7  -2.83522   TCGCTGTGATCCCCT             TGGGCCG GTTAA CGGCCCA             CTTTGCTGGCGACAT  76 32
CTM43_RS19640 4005210 .. 4005226 +  -5.1  -2.83908   GGCGCCTGCCACGGC              TGGCG CCGCCCA CGCCA              TATCATCATGCATTT  49 88
CTM43_RS19645 NONE
CTM43_RS19650 NONE
CTM43_RS19655 4009484 .. 4009503 +  -3.5  -3.13522   CAGCGGCCAGGTCGC            TTCCCGC TGCGGC GCCGGAA             TGTTCATCCGCCGCT  46 453
CTM43_RS19685 4016099 .. 4016114 +  -3.2  -4.36914   CGCCGGGCAAGGACA              GCGG GCGCAGAG CCGC               TTTTATGCCGGGCGG  63 189
CTM43_RS19690 4016521 .. 4016536 +  -3.2  -4.36914   CGCCGGGCAAGGACA              GCGG GCGCAGAG CCGC               TTTTATGCCGGGCGG  63 109
CTM43_RS19710 4021542 .. 4021565 +  -4.4  -3.10796   ACGTCGTTACGGCGC          GCCAGCGGAG AAAC TTCCGCCGGG           TATTCGGTGATGAAG  47 418
CTM43_RS19750 4033084 .. 4033114 +   -11   -2.6063   TTTCCTTTACTGGCG       CATGCCTGACGGCG CCG CGCCGCCAGGCAGA       TCAGTTATAAGTCAC  72 17
CTM43_RS19775 NONE
CTM43_RS19780 4039358 .. 4039370 +  -7.7  -3.19192   ACGCCGCGCGCCTCC                TGCCT GTA AGGCA                TTACCTTAGCTCAGC  62 65
CTM43_RS19790 4041388 .. 4041410 +   -12  -3.07816   GCGAGAAAAGCGTGA           CGCCTGCG GAAGCCG CGCAGGCG           TTGGCTGGATAGCGG  81 57
CTM43_RS19845 4050795 .. 4050808 +  -9.5  -4.17109   TCACCCATTAAAAAA               CCCGC CGGA GCGGG                TTTGGTTTAGTTATT  83 202
CTM43_RS19875 4055846 .. 4055861 + -10.4  -2.95717   ACTTGAAATAGAAAA              CCCACC GTTC GGTGGG               CTTCTTCTCTGTCGT  72 30
CTM43_RS19955 4064725 .. 4064736 +  -5.8    -3.551   AGCACCGGAATCTGG                CTGC AATA GCAG                 TTGTATCGGTTGCCG  59 135
CTM43_RS19985 4070237 .. 4070247 +  -4.6  -5.24129   TTTACTTTTGGATAT                 CCTC TTC GGGG                 TTTTTTATCACGCCG  83 296
CTM43_RS20075 NONE
CTM43_RS20080 NONE
CTM43_RS20085 4081824 .. 4081841 +  -9.8  -5.08601   TTTTTAACTCATCAA             CCCGGC CACCGC GCCGGG              TTTTTATTGCCCTAC 100 73
CTM43_RS20095 NONE
CTM43_RS20100 NONE
        gamL 4083039 .. 4083049 +  -2.4  -4.11692   ACTGGGATCACCGCA                 CAGG CTG CCCG                 TTTTAAGGATGCATG  55 9
CTM43_RS20110 NONE
CTM43_RS20115 NONE
CTM43_RS20120 NONE
CTM43_RS20125 NONE
CTM43_RS20130 NONE
CTM43_RS20135 NONE
CTM43_RS20140 NONE
CTM43_RS20145 NONE
CTM43_RS20150 4087859 .. 4087873 +  -7.8    -3.322   CGAACCTGTGACCTA               CGGCTT AGA AGGCCG               TTGCTCTATCCAGCT  59 75
        folD NONE
        ybcJ 4089336 .. 4089353 + -14.1  -5.66684   CAACGAAAATAAAAA             CGCCCGC TTTT GCGGGCG              TTTTTTTATGGCTTA 100 41
CTM43_RS20180 NONE
        lpxH NONE
CTM43_RS20190 4092621 .. 4092635 +  -2.1  -3.59966   AACCGTTTTCCTTGC               TGGCA GTTCA TGCTA               TTCTCTGTGGCCTCT  47 53
        purE NONE
CTM43_RS20200 4094267 .. 4094279 +  -3.3  -2.92777   CAGCTCAGCTAAGCC                CTTCG TGC CGGGG                ATTTGATCTATCCCC  45 29
        mnmH 4095499 .. 4095548 +  -3.6  -3.31322   AACGCCTTAGCCGGG CTAC-CGGTCG-GCGCGATTTGTAG CCA CGGTAAG-CGCGCGCGACCGGGGAG TTGTGACCGCTTAGA  48 73
CTM43_RS20225 NONE
CTM43_RS20230 NONE
CTM43_RS20235 4102674 .. 4102703 +  -4.9  -3.43492   ATCAGCCGCGCTGAG       GC-CATCTTCGGCG TCG CGCCGAGGCTCAGC       TTCTCCTGAATCTGC  51 410
CTM43_RS20255 NONE
CTM43_RS20260 4105723 .. 4105735 +  -3.3  -5.40474   AAACGAATCGCTTTG                CTGGT TAA GCCGG                TTTTTTTCGCCACAT  85 392
        copA 4108388 .. 4108413 + -17.6  -5.40072   CGCCGTCAGATGAAA         CGGGCGCCGA CGTTGT TCGGCGCCCG          TTTTTTTGCCGGGAC 100 42
CTM43_RS20275 4109356 .. 4109375 +  -7.8  -2.71763   CATCATTATTATTAT            CCCGGGAT TTGC ATCCCGGA             TCGTCTGATTGTCGC  58 84
        ybaK 4110364 .. 4110376 + -10.5  -3.25823   AAACTGCGGATAAGC                GCCGG AAT CCGGC                TTCATCTGCGCGACG  68 410
CTM43_RS20290 4113226 .. 4113267 + -10.9  -2.72471   ACCGGCAAAAAGCCT GATTAATCGGCGGCCAAAGT GCA ACCCTGGCCGCCG-TTAACC CTTGTGTCATCAGCC  72 24
CTM43_RS20295 4115538 .. 4115559 +  -7.9  -4.19506   AACTCCGGGATCGCC           CCCGGCAGC AGCG GATGCTGGG            TTTTCCGCTTCGCCT  74 434
CTM43_RS20345 NONE
CTM43_RS20350 4125343 .. 4125362 +    -5  -2.84634   GAAGTAGGATGTTGT            CT-CCGGCA GTG TGCTGGCAG            TCTGGTCCTCTGCGC  47 34
CTM43_RS20355 4126309 .. 4126329 + -15.4  -3.08679   CGCCCTGATACAGCA            GGGGCGGC TTTGC GCCGCCCC            TCTTCGCTCAGGACG 100 33
CTM43_RS20370 NONE
CTM43_RS20375 4134988 .. 4135005 + -14.1  -5.28176   TCACTCCTGAACAAA             GGGCCGC TACC GCGGCCC              TTTTTTATCACTGGC 100 44
        tomB NONE
CTM43_RS20385 4136171 .. 4136181 +  -2.4   -5.1471   TCAGCCAACAGCAAC                 CCTG TAA CCGG                 TTTCTTTTTTATACT  73 122
CTM43_RS20390 4136874 .. 4136907 + -27.5  -2.72379   TAGCCTTCAGGCTGA     GCCTGCCGCGCCTGG TCCG CCGGGCGCGGCAGGC      TCATTGCAGAATTCG 100 100
CTM43_RS20395 4137880 .. 4137893 +  -3.7  -4.26076   AAAACCGATACGCAA               CGCCG GAAA CAGCG                TTTTGCTGAAGGTGC  65 503
CTM43_RS20405 4139863 .. 4139878 +  -4.7  -5.63517   AATCGGGCTGCACTG              CCTTC ATTGGC GAAGG               TTTTTTGTTTGCCCG  91 223
CTM43_RS20425 4142896 .. 4142923 + -18.6  -5.18866   TCTTTGTCTTATTTT        CGGGATAACCTG TTTT CAGGTTATCCCG         TTTTATTTATTTCCG 100 128
        ugpC 4151649 .. 4151678 + -10.7  -4.56597   GAATCATCCTTCTCT       CCCGGCATCGCAG CCTG TTGTGATGCCGGC        TTTTTCCCCAAACGA 100 139
CTM43_RS20465 4153732 .. 4153745 +  -3.1   -3.7574   TATTAGCCGCTTTAT               CTACT GGGG GGTAG                TATTTTACTACTGGG  51 429
CTM43_RS20475 4155094 .. 4155108 +  -7.1  -3.55444   TGACATTGCTCACCG               TGCCG AGCCC CGGCA               TTTGCCGGATCGGGA  60 468
CTM43_RS20485 4157316 .. 4157326 +  -6.8  -4.28432   CCAGCTGAAAAGCCA                 GCTG CAG CAGC                 TTTTCCGTTGCCGTT  74 515
CTM43_RS20505 NONE
CTM43_RS20510 4158945 .. 4158970 + -11.1  -4.19678   GGACCGGAACCAGCG         TCAGGTCGGCA TGAG TGCCGCCCTGG          TTTATTACCGTCTGC  88 107
CTM43_RS20520 4160478 .. 4160495 + -12.7   -4.2349   CAACGCATAAAAAAA             GCCTCCC GGAC GGGAGGC              TTTTCGCTATCAGGA 100 31
CTM43_RS20550 4167648 .. 4167669 + -13.1  -3.14683   AAGGCGATAAAAAAA           GCCAGATAG AAGC CTATCTGGC            TTGCTGGAAGGGTCT  84 31
CTM43_RS20560 4170358 .. 4170374 +  -6.5  -4.41302   TGATGGAGGGCGTCT              GGCGCTA CCA TATCGCC              TTTATTCATTTAGTC  74 50
CTM43_RS20565 4171256 .. 4171277 +  -2.9  -4.14739   GCACGCAATTCCCCT           TCCAG-CGGC AGC GCCTTCTGGG           TTTTCAAATCGATAC  60 180
CTM43_RS20625 4182658 .. 4182687 + -15.7  -4.04318   CGCGCGTTAATGCTA       TCGCGAACCCGGC CTCC GCCGGGTTCGTGC        TTTATGCTATGTCCA 100 31
        ampG 4184182 .. 4184233 +    -9  -4.73682   TTTAAGGATCCAGCA TCATT-ATTAGCCGTTGTAATTACG AAA CGTAATTATAACGGCTTATTAACGC TTTTATATTGTCCGC 100 36
CTM43_RS20635 NONE
CTM43_RS20640 NONE
CTM43_RS20645 NONE
CTM43_RS20650 NONE
CTM43_RS20655 4189460 .. 4189477 + -12.7  -5.26907   CCAGTACGCTCTAAG             GCCCCGT TTTT ACGGGGC              TTTTCTTTTCTGTTC 100 50
CTM43_RS20660 4190032 .. 4190052 +  -9.7  -3.34398   GCGACGTCTATCTTA            GGGCAGC GCCACTG GCTGCCC            TGTTTAACCCACCAG  73 41
CTM43_RS20670 NONE
CTM43_RS20675 NONE
CTM43_RS20680 NONE
CTM43_RS20685 NONE
CTM43_RS20690 NONE
CTM43_RS20695 NONE
CTM43_RS20700 4199277 .. 4199299 + -13.5  -4.50686   TAATTTTCCCCCTCG           CCAGTGGAG TCCCC CTCCACTGG           TTTATTGATTTTTAC 100 38
CTM43_RS20705 4200793 .. 4200808 + -11.8  -4.84527   AAGGGGTGTAAAAAA              GCGGGG AATT CCCCGC               TTTTTGCTGTCTGCC 100 30
CTM43_RS20715 NONE
        yajL 4202980 .. 4203010 +   -11  -3.15027   ATTACTACGAAGCCT       GATAGCCGGTCCGC GCC GCGGGCTGGCTCCC       CTTTTCCTGAGGAGT  76 24
CTM43_RS20725 4203534 .. 4203554 + -12.6  -4.21194   TGCCAATAGTAAAAA            GGCCTTCC ATCAG GGAAGGCC            TTTTGCATCATAACA 100 51
CTM43_RS20735 NONE
CTM43_RS20740 NONE
CTM43_RS20745 4208282 .. 4208294 +  -3.3  -2.88663   TGATGAATAGCAGGA                GCGCA CTA TGCAC                TATATCCCCCTCGGT  43 79
CTM43_RS20750 4209565 .. 4209580 +  -3.2  -3.25204   CAGACGATGCTGCCG              TGGTCA TGGG TGCCCA               TATCTTTGGCCGTGC  45 327
CTM43_RS20785 4214151 .. 4214163 +  -2.7  -3.35073   CTTATCCACTTACAA                CTTTT CGC AAGAG                TTCATTAGAAATCGT  47 88
CTM43_RS20790 4215293 .. 4215321 + -21.7  -5.72622   ATACAGCAAGACAGC        GCCCGGGCCGCAG CTC CTGCTGCCCGGGC        TTTTTTATTTCTCCC 100 47
CTM43_RS20830 4222958 .. 4222983 +  -4.7  -3.17723   CTCTTTGTGTTATTG         C-CGGGCAGG CTCTATA CTTGCCCGCG         TTGCGTTCCAAATAA  50 88
CTM43_RS20835 4223647 .. 4223664 + -10.5   -5.4505   CGCGTTTTAATAAAA             GGCTCGC TCAG GCGGGCC              TTTTTTGTTAGCGGC 100 47
CTM43_RS20840 NONE
CTM43_RS20845 NONE
CTM43_RS20850 4226139 .. 4226153 +  -3.5  -3.54424   AGGTCATTTTTCCCG              GCG-GG AGGG CCACGC               TTTCCGCCGCTGACA  50 44
CTM43_RS20855 NONE
         fba 4228472 .. 4228483 +  -7.2  -4.18934   GGCAAGCTGACCGGC                GGCC AGAC GGCC                 TTTCTTGCCCTGCTC  71 459
CTM43_RS20880 4232685 .. 4232699 +  -5.7  -3.85698   GCGGTTAATCGCCAC               CAGCA CCCGC TGCTG               TTTGTAGACGCGGAC  61 178
        sbcD NONE
        sbcC 4244529 .. 4244548 +  -4.2  -4.28762   GCCGCTGTTCATAGC            GGCTCAGC GCCA GTTCAGCC             TTTTCGTCACCTTCT  65 335
        rdgC 4246201 .. 4246217 +  -9.3  -3.95584   GCTCGGCGGCGAAGC              GCAGCGC TAA GCGCCGC              TTTCCTTCCTGCCGG  76 16
CTM43_RS20950 4249491 .. 4249520 + -10.6   -2.7035   CTGCGATAAACTATC       CGGGCCGCCGGT CTGAAC GCCGCTGGCCCG        TAATGTCTCCATAAA  62 106
CTM43_RS20960 4250835 .. 4250852 + -12.7   -5.4477   TAGGTTAAAGAACAA             GGGAGCG CGTG CGCTCCC              TTTTTTTCAGGCTTT 100 69
CTM43_RS20990 4256870 .. 4256882 + -10.5  -2.89191   CGCATCTTCGCATAG                CCGCC CGC GGCGG                TCTGTAGCGATATGG  71 298
CTM43_RS21000 4257504 .. 4257519 +  -3.2  -5.24129   GCAACATCTCCCGCG              GCAGGGT TTT GCCC-GC              TTTTTTCTCGGCGAG  81 141
        ampH NONE
CTM43_RS21025 NONE
CTM43_RS21030 4264752 .. 4264785 + -10.9  -2.91467   GGCATAAACGCTTTT     TCCCGGCTTGCGGCGC GTT GCGCC-TTAGCCGGGC     TATGGTTCACCGTTT  74 34
         eat NONE
        eutB NONE
        eutC 4274803 .. 4274837 +   -10  -4.06148   TTGCCCGGCGGCGCT     TCGCTGGTACGGGT CTACGGA AGCCGTGCCAGCGG     TTTATATGGCGTATT  81 117
CTM43_RS21080 4276383 .. 4276393 +  -2.6  -2.57344   CGTTTCGTACCGTGG                 TTAA CCC TTAA                 GTTGTGACGAGGCTA  40 15
CTM43_RS21085 NONE
CTM43_RS21090 NONE
CTM43_RS21095 NONE
CTM43_RS21100 4279829 .. 4279880 + -15.1  -3.13403   GATAGGCATGGTCAA AACTGCCTG-GGCTGCGGCGGCGC CTCCT GCGAGGCCGCAACCTCAGGCAGTC TCTTGCTACACAAAG 100 36
CTM43_RS21110 NONE
CTM43_RS21115 NONE
CTM43_RS21120 NONE
CTM43_RS21125 4283937 .. 4283994 +  -6.8  -3.05384   CGCTCTCACCTGCCT G-CAGCAC-CAGCTGGCGGGGGGCGAAC AGCA GTTCGCCATCCACCGGCCGGGAGCGGAC TTCGCTGCCGCCCGG  55 466
        phnC NONE
        phnD 4292957 .. 4292991 + -14.3  -2.53263   GTTAATCCTGCCTCA    ACGCCGCCTGCTTGCC CCAG GGTAAGC-GGCGGCGC     TACGTTGAAGATCCC  87 36
        phnE NONE
        phnE 4294887 .. 4294920 + -10.3  -2.58544   GCACGGAGCTGCTTT     TATGCCGGGTGGCGGC TGC GCC-TTACCCGGCCTA     CTTGTCCGGCTCCGA  69 146
CTM43_RS21200 4297634 .. 4297654 +  -8.2  -4.74132   TAAACGTAAAGGCGG            CCTCGGCT TATTC AGCCGTGG            TTTTTAATCGGCTAT  88 48
CTM43_RS21205 4298353 .. 4298373 +  -3.9  -4.38114   ACCCAGCGCGACGAT            GTCGTCATC GTT GATGCCGAG            TTTGTTATCGCTTTT  65 103
CTM43_RS21215 4300747 .. 4300757 +    -4  -2.52676   GGCCGTCCACCGCGA                 TGAT ATG ATCA                 TCCGTTAAGGAGCTG  44 7
        proA 4302036 .. 4302090 + -12.8  -2.60823   CGTGCGTAAATGAGA ACGGGCGATGCAAAAATAGGCAGTTG ATT CCACTGGCTATTGACGCATCGCCCGC TAAGTTCTAACCTTT  81 32
CTM43_RS21225 4302554 .. 4302566 +  -3.3  -3.06501   GCACACGACATGCAG                GCTCT GCC AGCGC                TTCGCTCACGCTCTG  45 362
CTM43_RS21265 4309228 .. 4309256 + -11.7  -5.71983   CTAAGCAGAGTGAAA        TGCCTGCCTGG CGTCTGA CCCGGCAGGCA        TTTTTTTATCGTTCC 100 65
CTM43_RS21290 4313966 .. 4313988 +  -7.6  -4.25104   CTGACTCTACCTATG           GCCCCGCG CCGACAA CGCAGGGC           TTTTCATCGCCACGC  75 47
CTM43_RS21315 NONE
CTM43_RS21320 NONE
CTM43_RS21325 NONE
        lpdA 4325760 .. 4325774 +  -8.6  -4.25104   CAAGACTTGCTTATT               TGTTCG TTA CGAACA               TTTTAATACCAGGGG  77 308
CTM43_RS21340 4327313 .. 4327339 +  -7.9  -3.15544   ATTGGCCTCCAGCCA         GCGGCGCATTG TCAGC CATTTCGCCGC         TTCATAACGATCCCA  57 198
CTM43_RS21355 4328632 .. 4328651 +    -3  -2.94924   TTCGTACGCATTTTA            TAAAAATG TAGA TATTTTTA             ATTTATGGCTACGAA  43 23
        csiD NONE
CTM43_RS21365 NONE
CTM43_RS21370 NONE
CTM43_RS21375 NONE
CTM43_RS21380 4335288 .. 4335313 + -13.3  -3.03124   AAATACGCGTTAACT         CTGTTCCCGGC GCCC GCCGGGAAGAG          TATTCAGGAGTAAGA  86 28
        csiR 4336191 .. 4336212 +  -7.3  -5.08169   AGCAGCGCTGCTGCG           CGCT-CGTGA AAC TCGCGCAGCG           TTTTTTCCAGTCTCT  90 193
CTM43_RS21405 4340098 .. 4340118 + -19.7  -4.08216   AAATAAGCCCCACAA            CCGGCGGCG GCC CGCCGCCGG            TTTTACCCCGCATCA 100 35
CTM43_RS21420 4343090 .. 4343109 +   -15  -4.57569   GCCGCTGCTGACGCT            GCGCCTCG CGGG CGAGGCGC             TTTTTACGCGCGTCG 100 454
CTM43_RS21460 4349460 .. 4349480 +  -3.9  -3.10245   GTGAGCGCTCTAAAT            CCAGAAAAC TCT GATTTCGGG            TCTCTCTTGCCGTCC  48 195
CTM43_RS21465 4350287 .. 4350308 + -10.9  -3.91084   AATAACGCCCACTCG           CCTGGCATG ATCT TATGCCAGG            TTTCATTGGCCGTCA  81 36
CTM43_RS21480 4354381 .. 4354400 +   -15  -5.04385   CCACATCACACGCCG            GGCGGGGA ACTT TCCCCGCC             TTTTTTCGCCCTCTC 100 52
CTM43_RS21485 4355312 .. 4355329 +  -8.4  -5.06414   GGCTAATCACCCTTC             GGGAGC CGCTGC GCTCCC              TTTTTATTCCACCAC  93 35
CTM43_RS21495 4357192 .. 4357204 +  -4.7  -4.77173   ATCAGGCACGCCACA                GGCAG CTT CCGCC                TTTCTTTTGTACCAG  73 309
CTM43_RS21510 4358531 .. 4358542 +  -5.8  -3.53091   CGGATTGAGCGTCAG                CGGA ATGG TCCG                 TTTGCGGGCGACAAT  55 115
CTM43_RS21520 4359966 .. 4359980 +  -5.6  -3.54743   TTTAATTCTTGTCAT               CGGCCA ACT TCGCCG               TTATCCTTGGTCGTC  56 43
CTM43_RS21525 4361408 .. 4361428 +  -9.7   -5.4833   CTGGTTCGACAAAAA            GGCACCG ACTTCCC CGGTGCC            TTTTTTGTTGCCTAA 100 46
CTM43_RS21545 4365643 .. 4365657 +  -5.6  -3.81488   CATGCCAGGATAACC               TGCGCC GGA GTCGCA               TTATGTTTCGCCACG  61 261
        metN NONE
        metI NONE
CTM43_RS21600 4375491 .. 4375515 + -13.6  -3.00946   CACCGTAATATCATT          CAGGACGGGC TTCAC GCCCGTCTTG          TCATTTATGCAAGCA  86 49
        rcsF 4375974 .. 4375986 +  -6.2  -2.84878   GCGCTTAACGTCTCG                GCGC AATGA GCGC                ATTTCAGTTCGCGCA  52 17
        tsaA 4376751 .. 4376766 + -10.4   -3.0873   ACTTTTTTTGTTTCA              GGCTGG GCAA CCAGCC               TGTTCCGCTCGTTTA  72 90
        proS 4378529 .. 4378553 + -12.9  -4.56597   CTAACACCCACCTCA          GGGCCCTGA ACGGATG TCAGGGCCC          TTTTTACAAGGACAG 100 37
CTM43_RS21620 4379617 .. 4379629 +  -4.7  -3.17392   CGTTTTCATCATCTC                GCCGG TAT CCGGG                TTCGCTTCGAGAGTA  49 226
CTM43_RS21640 NONE
CTM43_RS21645 4381897 .. 4381912 +  -7.5  -4.26076   ATCCTGAATCAAAAA              CGGGC TTAATC GCCCG               TTTTCCTCCACATCA  73 34
         map 4406706 .. 4406721 + -11.8   -5.4833   GATGAATGATGAAAA              GCCGGC GCCC GCCGGC               TTTTTTATTAGATAG 100 32
        glnD NONE
        dapD 4410288 .. 4410303 + -10.4  -5.88197   TAAAGCAAATAAAAA              GCGGGA GATA TCCCGC               TTTTTTTATATTTGA 100 38
CTM43_RS21770 4410841 .. 4410869 +    -6  -5.47218   AGCATGCATCGTCCA       GGCCGGGTATGGCG CGT CGC--TACCCGGCA       TTTTTTTGCCTCCAC  90 97
        mtnN 4416065 .. 4416105 +  -4.1  -3.13403   CTGGTACAGAACCTG GCA-CGTGGCTAAGTCGCTA TCCT TCGCG-CTT-GCCGCGCTGC TGTTACTCGCCCCGG  48 14
        btuF 4416871 .. 4416888 + -11.3  -3.06183   ACCAGGTAAAATAAT             CATCCGG CACA CCGGATG              TTCAGTGGGAATCAA  74 27
CTM43_RS21800 4417541 .. 4417560 + -12.2  -4.71482   GTAATAAAAGCAAAA            CGGTAACC TTAA GGTTACCG             TTTTTAGGGTTTGCT 100 37
CTM43_RS21815 4420948 .. 4420960 + -10.5  -3.30124   GATTTTCCCGGAGGA                GGCGC ATT GCGCC                TTATCCGGGCTACCA  75 67
CTM43_RS21845 4430726 .. 4430747 +  -6.5  -4.81163   AGCGAAATATCCTCA           GCGCGC-CGG TTA TTGTGCGCGC           TTTTATTCCTCTTTC  80 40
        gspC NONE
        gspD NONE
        gspE NONE
        gspF NONE
        gspG NONE
        gspH NONE
        gspI 4442014 .. 4442054 +  -5.5  -2.71364   CCACCCTGCGCACCT GGGTGACGCCGC-CAT GATAACCAGG ATGCGCGGTTTCACCC  TGATTGAAACGCTGC  48 9
        gspJ NONE
CTM43_RS21900 NONE
        gspL NONE
CTM43_RS21910 NONE
CTM43_RS21915 NONE
CTM43_RS21920 4446880 .. 4446905 + -14.1  -2.73483   GGCGGGTCGGGGCGG         CGT-TGGCCGGA TCG TCCGGCCAGACG         TGCTTCGGATAGCGT  80 108
CTM43_RS21930 NONE
        sfsA 4450611 .. 4450635 +  -2.8  -2.62244   ATAAGTGGCTAAATA          GTGTTCGGGT CGCAA GCGCGAATAC          GCTTTTCTTCACAGG  41 37
        dksA 4451239 .. 4451257 +   -16  -2.96991   GCTGCCTCACTCTCT             GGCGGGAG TCT CTCCCGCC             TGGTTCTGTTGTCCG 100 47
CTM43_RS21945 4452141 .. 4452153 +  -4.8  -2.90392   GAGCATTCTCAAATG                GCTC CCGCT GAGC                TATGATTAGCCGCTA  47 8
CTM43_RS21950 4453600 .. 4453621 +  -3.7  -3.02626   CAAGCGCGCGCCGCG           CCAGGGT AGCGCATG ACTCTGG            TCTATATCGCTCTTG  45 10
CTM43_RS21955 4454114 .. 4454131 +  -4.1  -2.52543   TCCCTTTTTTAGCAT             TTGCGGC GATC GTCGTAA              TCGGTTGCCCAAAAT  44 48
        panB NONE
CTM43_RS21965 4455884 .. 4455901 +  -9.1  -2.52946   GACAGCGGGTAAAAA             TCGGGCA ATAC TGCCCGG              GCTTTTCTCAGGGCG  63 40
        panD 4456348 .. 4456375 +   -17  -3.04144   GGTCGCCTGATGGCC        GCGACGCTGCGC TCAG GCGCAGCGTCGG         TATTACCCCTGCGGC 100 31
CTM43_RS21995 4460798 .. 4460851 +  -7.3  -2.52516   ACCACAGATAGCCTT CAGACTTCGCCACCCTGGAGAGCGCG GCG CGCGCTGTCCAGAGTGG-GATATCCC CTTACTCGTCCAGCA  56 30
CTM43_RS22005 4463994 .. 4464011 + -11.3  -5.94597   AAATAAAACGCAAAA             CGGCAAC GAAA GTTGCCG              TTTTTTTTGGTGTTC 100 35
CTM43_RS22015 4466166 .. 4466188 + -12.7  -2.82936   GTTAAATAATTCCCT          GCGCGG-GCG GCAA CGCTCCGCGC           CTTTAGCATTTCAAT  81 32
CTM43_RS22020 NONE
CTM43_RS22025 4468852 .. 4468874 +   -17  -2.66517   ATAGCCTCATCCTCT           CCACCGCCCT TCC GGGGCGGTGG           CTGTTATTCCTGCCT 100 37
CTM43_RS22030 NONE
CTM43_RS22035 4470680 .. 4470691 +  -2.2   -4.4078   TGTAATCTATGAAAT                GC-CC GGC GGCGC                TTTTGCTTGCCGGGC  61 36
CTM43_RS22055 NONE
CTM43_RS22060 4476835 .. 4476862 + -18.5  -4.45664   GAACCTTAAAAAAAA        CGCCCGGTTGC ACTCAC GCAACCGGGCG         TTTTCATTCACTTAG 100 32
        aroP 4486484 .. 4486520 + -12.4  -3.93117   ATCAATACTTCACTT    TGCTCTGCGCCC TCCCCTGAATAAT GGGCGCAGAGCA    TTGTTATCTGCTTCA  91 49
CTM43_RS22095 NONE
CTM43_RS22100 4489017 .. 4489030 +  -9.5  -3.28791   CGGTTCGGAATGTTA               CCCGC TGGC GCGGG                TTCTCCAGGCCGGGT  73 41
CTM43_RS22115 4491682 .. 4491715 + -17.5  -2.71791   CGCTTCCGCTGAGCA     ACAGGCCTTCACGCT TCCG GGCGTGAAGGCCTGA      ATTTGCGGCCCGCCT 100 29
CTM43_RS22120 NONE
        gspE NONE
CTM43_RS22130 4495154 .. 4495176 +  -4.8  -4.10179   ATCGCCGACTCGGAG           CTCATGCCGT AGA ACAGCATGAA           TTTCTCTCCGTTCTC  64 297
CTM43_RS22140 NONE
        zapD NONE
        yacG 4498339 .. 4498356 + -12.7  -4.91046   GCGCTCCATAAAAAA             GGCGCAG AACT CTGCGCC              TTTGTTTGTTTTATC 100 491
CTM43_RS22265 4524238 .. 4524251 +  -8.1  -3.91597   TGTCATATAAAAAAA               GGAGC CGAA GCTCC                TTTGCTATCTATCGT  70 194
CTM43_RS22275 4525968 .. 4525985 + -14.1  -5.67967   AGCAAGACTATAAAA             CCCGCGC CTTG GCGCGGG              TTTTTTTATGCTCGT 100 51
CTM43_RS22280 NONE
        leuB NONE
        leuC NONE
        leuD 4530727 .. 4530746 + -11.4  -5.62288   TGAATTAACCTTTGG            GCCCGGTC ATTT GATCGGGC             TTTTTATTTTATTGC 100 33
CTM43_RS22300 NONE
CTM43_RS22305 NONE
CTM43_RS22310 NONE
CTM43_RS22315 4536031 .. 4536078 + -17.8  -2.55712   GATGGATATTCTCTC CTGATATCCGGATGGCCCGGAGG TCA CATCCGGGCCATCCGT-TAACAG ATCTTCTGGCTGTCG 100 22
CTM43_RS22325 4538508 .. 4538548 + -13.9  -2.92246   CGTATCGAACTCAAG  TAGGCCTAGTCGCCCCGGC GAT GCCGGGGCGAGTAGTCAGA  TATCCTTCACCTTGC  90 23
        sgrR 4542118 .. 4542160 +  -7.7  -2.84317   CCTGATCCGGATAAC GCCGGCGAAGGGATTTGAG GCTCA CTCAAAATCCTTTGCCACC CCTTTTTTCTGAGGT  59 252
CTM43_RS22345 NONE
        thiP NONE
        thiQ 4545863 .. 4545884 +  -7.3  -2.80077   CAGAATGGTGATCAT           GC-TGTGCTG ATG CAGCGCATGC           TCGGTTTTCTCCAGC  51 453
        araB NONE
CTM43_RS22375 4550777 .. 4550790 +  -5.2  -3.95073   AGAGGGGACCGACCG               GGCG CCATGC CGCC                TTTCTCCCTCTCCCG  61 79
        araD 4551689 .. 4551709 +  -6.1  -5.24129   GCGCCCCTCATGAAA            CCAGGCT ATAATCA GGCCTGG            TTTTTTATCGGCGAG  89 158
CTM43_RS22385 NONE
        rapA NONE
        rluA 4557865 .. 4557901 +   -16  -3.15544   TTTTAACGCTCATAC    TTCGAGTTGCATGCGG GTTGG CTGCGTGCAACTCGGA    TTAGTGAGGATACAG 100 35
CTM43_RS22405 4558823 .. 4558841 +  -4.5  -4.56597   AACAATCGCCACATC             GATCGGG TGCAT CCCTATC             TTTTTACCAACCAGG  72 228
CTM43_RS22415 NONE
CTM43_RS22420 4562827 .. 4562848 +  -4.3  -4.25104   GATAGGCGCGCTTCA           CCG-TCGCCG CGT CGTCGGTCGG           TTTTACTCCCAGCAC  62 210
        lptD 4566095 .. 4566121 +  -5.8  -3.67976   CAGAGCTCCCTGTGA         TGCGGCTGGTTT ACA ACATCATCCGCA         TTTGCGGTTAATCGA  61 26
        surA NONE
        pdxA NONE
CTM43_RS22445 NONE
        apaG NONE
        apaH 4570682 .. 4570708 + -15.1  -5.65177   TCATGCAAAAGAAAA         CCCCGGTCACG CCAGA CGCGACCGGGG         TTTTTTTATCGCTAT 100 226
CTM43_RS22525 4586465 .. 4586483 +    -6  -2.73124   GCTGGTCATCGCCAG             CATCGTGT TCG GCATGATG             ATTTAACCCATACGC  51 1
CTM43_RS22530 NONE
        oadA NONE
CTM43_RS22540 4590031 .. 4590064 + -18.1  -2.96695   GTAGGCCGACATCCT     TCCCGGAGGTGTGGC TGTC GCCCCACCTCCGGGC      TGATTTGATACCCAC 100 37
CTM43_RS22545 NONE
CTM43_RS22550 4592531 .. 4592555 +  -7.8  -3.83155   AAACGCTTACGCCAG          GGTGTAGCTG ACCAC CAGCTGCCCC          TTCTTCATCTTAATC  70 40
CTM43_RS22560 4594598 .. 4594612 +  -7.8  -2.77182   CACCTGGGCGTTCGC               CGGCTG GCC CAGTCG               TCCTTCGATATCCAC  54 450
CTM43_RS22605 4601937 .. 4601950 +  -9.5  -5.64274   ACTTTGTTAAAGAAA               CCCGC GAAA GCGGG                TTTTTTTATGCCTAC 100 56
CTM43_RS22630 NONE
        msyB 4609085 .. 4609098 +  -2.3  -4.33708   CGCCGCCAAGTCGCG               GGGTA ATGC TTCCC                TTTTAATGATAATTT  61 76
CTM43_RS22640 4609694 .. 4609725 + -15.8  -2.83271   AACCGCGCTAATCTT      CC-GCCGCCGTCCGG TCA CAGGGCGGCGGCAGG      TCATTATCAGCATCA 100 30
CTM43_RS22660 4614551 .. 4614572 + -11.5  -3.65351   ATTATCTGCGTCAGC           GGCGGCTGG GTAT CCAGCCGAC            TTTCGATGCCACTCG  85 127
        yaaA 4615520 .. 4615534 +  -7.8  -4.26019   TACGGTAATAAAAAA               GGGGAG TCA TTCCCC               TTTTCAATATAATTA  75 46
        arcA 4623366 .. 4623384 + -17.4  -5.26316   GCCATGATGCGAAAA             CGGCGCCC CAG GGGCGCCG             TTTTTTATGCCGTCA 100 57
        robA 4628818 .. 4628834 +  -7.9  -4.10566   GGTGTGCCGTTGACC              AGCTGGC GAC GCCAGCC              TTCTTCTTCTTCGCT  74 350
CTM43_RS22745 4630098 .. 4630127 + -12.1   -2.9155   ATCGCGCCACCATAT       TGAGACGGGCAGC TTAC GCTGCCCGTCGAA        TGTACTCTTCAACGA  80 357
        ettA 4634015 .. 4634030 +    -9  -5.32699   AATAAAACGCAAAAA              GGCAAC GCAA GTTGCC               TTTTTTAATGTTTGC 100 36
CTM43_RS22785 NONE
CTM43_RS22790 4639608 .. 4639646 +  -7.6  -2.83164   CCAGCGCGATTTTGA  TCA-TGTCGTTGAACGT GGTCTG ACGTTCAGCGGCAGTGG   TCTGCTCGTGGGTAC  54 150
CTM43_RS22860 4653233 .. 4653246 +  -5.2   -3.3422   GCTGGCGCTTCCCGC               GGGC AAATCC GCCC                ATTTTTGCAGCAATC  54 76
CTM43_RS22865 NONE
CTM43_RS22870 NONE
CTM43_RS22875 4654098 .. 4654116 +  -3.2  -5.43866   TATATTAAATATTTT             GCTTATTT TGC AAATAACC             TTTTTTTGCACATTG  81 450
CTM43_RS22885 NONE
        fhuF 4656159 .. 4656186 + -14.9  -3.54447   CCACTTACCTGAAAA        GTAACGGGCGG CCTTTA CCGCCCGTTGC         TATTTATGCGGTCTG  93 44
CTM43_RS22900 4658648 .. 4658665 +  -4.7  -4.23213   CAAACGCTCCTGTAG             CCCGCGT CGCG GCGCGGA              TTTATTCAGTATGCC  64 343
CTM43_RS22930 4663081 .. 4663094 +  -2.3  -2.76272   TGACCGTATGGGGGC               TGCGC GGAT GGGCA                TAATCTCATTTATTT  40 9
CTM43_RS22935 4663567 .. 4663589 + -10.5  -2.71731   TCGCGTCTAACCCCG           ACGTCGCGG TTAAT CCGCGACGC           TCCTTCCGCGATGGC  69 31
CTM43_RS22940 NONE
        dnaC 4664956 .. 4664966 +  -2.4  -3.40522   TAAGAGATTTCCGGG                 CGAC GAC GGCG                 TTATACTAAAGCGAT  45 38
CTM43_RS22950 4665723 .. 4665741 +    -6  -3.15544   AAAAGTAATCTGTTC             TGCCAG CCGATAA CTGGCA             TTAATGAGGATGAGC  55 248
CTM43_RS22955 4668056 .. 4668086 + -14.1  -2.64099   GAAGGCTAACGCAAT      C-CTGCCCGGCG-GA TTT TCGCGCCGGGCAGCG      GTTGTCGTGGCAGGA  88 32
CTM43_RS23005 4678145 .. 4678160 +  -6.1  -3.36492   GCCCGAGTCGCGCTG              CGCCA TGCGCC TGGCG               TTGTAGACTTCAGCA  57 4
CTM43_RS23010 4679586 .. 4679615 +  -4.2  -4.19678   CAGTCCGGCGAGTTG       AGCGGGATTTCG ATATAG CGAAAGCCTGCA        TTTATTAGCGTCTCA  62 512
CTM43_RS23040 4684213 .. 4684225 +  -3.5  -2.62463   TTTATATTAAAAATA                TATTT ATC AAATA                GTTATAAATGATACC  42 2
CTM43_RS23045 4685873 .. 4685890 +  -8.4  -2.62616   CGCCGTTATCCCACG             CCAGCG ATTCGG CGCTGG              TCATATCGCCAATAA  57 398
CTM43_RS23055 4687184 .. 4687194 +  -3.2  -4.21194   CCAGCAGGGAGGTCA                 GTTG CTG CAGC                 TTTTCCGTGGTGAAC  60 304
CTM43_RS23070 NONE
CTM43_RS23075 NONE
CTM43_RS23080 NONE
        hpaE NONE
        hpaD 4691553 .. 4691574 +  -2.9  -3.22113   CCGTTGCCAGCGCAG           GC-GTAAGGG GGC CCCATGCCGC           ATTTTATCGCCGAAT  45 20
CTM43_RS23095 NONE
        hpaH NONE
CTM43_RS23105 4693657 .. 4693673 +  -3.7  -2.62184   ACCGATAACAATAAA              TCCGT CTATTGA ACGGA              TAATGTGGAGCGCAA  42 14
        hpaX NONE
        hpaA 4696063 .. 4696076 +  -2.4  -2.52464   CTGAAAAGTACCCGC               CGTT GTCGCA AACG                TCCCTTCACGACAAG  39 140
        hpaB NONE
CTM43_RS23125 4698273 .. 4698313 + -16.4  -3.28416   GGCAGTCTAAAATCC GCGCCCAGGTTTACTTATC GCCC GATACGTAAACCTGG-CGC  TTAATATGCGTCATC 100 31
CTM43_RS23140 4702395 .. 4702423 +  -7.5  -4.38203   AGCGCATTAACGTAG       GCCGGATATGGCG CTAGC CGCCA--TCCGGC       TTTATTCGTTATCTG  76 82
CTM43_RS23145 4702632 .. 4702645 +  -5.9  -3.13403   GCGGCGACGGCAAAG               GCGGC GTAC GCTGC                TGTTAATGGAGGCAA  55 6
CTM43_RS23150 4703623 .. 4703652 +  -9.1  -3.58905   TTACGACGCTAACCT       GCCCGCCTGCGCC CTAA GGCGCAGGCCCCC        TTCTCTCTGAGACCT  71 29
CTM43_RS23155 4704614 .. 4704629 + -10.4  -5.60993   TTAGCCATAAAAAAA              CCTGCC GAAT GGCAGG               TTTTTTTATGGCCGG 100 83
CTM43_RS23170 4708162 .. 4708185 +  -5.2  -3.28924   AAGTAATACGCCACC          TGGCGTAGGG TGGC CTCTGCACCA           TTATCGAGGCCACTA  54 35
CTM43_RS23175 4708840 .. 4708853 +  -2.3  -2.90901   GATTTTTGCACGACC               TCGCC GTCA GGCTA                TATGCTTAAGCATAT  40 3
CTM43_RS23180 4710125 .. 4710137 +  -3.3  -3.24329   CGCAGATCCCCTCGC                TGCTG CAT CTGCA                TATTGGTTAGCAATG  46 3
        mdtM NONE
CTM43_RS23190 NONE
CTM43_RS23195 NONE
CTM43_RS23200 NONE
CTM43_RS23205 NONE
CTM43_RS23230 4718499 .. 4718539 +  -6.8  -2.64243   ATGGAGTGAATTTAA CCTGTTCTCCCCGGTG-GCG CTG CGCTTACCGGGGCTA-CGGG TGATCTAGCGTCTGC  53 32
CTM43_RS23245 4721179 .. 4721194 +  -7.5  -4.36914   CCGATCAACATGATC              GCCCG ACCCAG CGGGC               TTTTCTCCAGCAGCA  74 450
        trpS 4726782 .. 4726795 +  -2.4  -3.83205   TTTTGTTAACACGCC               GACA AGACCC TGTC                TTTCGTATGGACAAT  52 69
CTM43_RS23275 NONE
CTM43_RS23280 NONE
CTM43_RS23285 4731988 .. 4732012 +  -4.8  -2.52776   CATAAAGGCTTAAGA          AGGGCCGTCG ACTTA CGGCGGCCGA          ATGGTTTATTTATGG  46 36
CTM43_RS23320 4739656 .. 4739681 + -11.1   -4.7878   GAGAGTCGCGATACT         GCGGGCAGCCGC CTG GCG-CTGCCCGG         TTTCTTTTATGACTC 100 41
CTM43_RS23345 NONE
CTM43_RS23350 NONE
CTM43_RS23355 NONE
CTM43_RS23360 4745943 .. 4745956 +  -2.4  -2.57564   CACTAAGGAACGGAA               CCAT GATTGA ATGG                ATTATCCGCCGCTCG  39 35
CTM43_RS23365 4749087 .. 4749127 +  -3.3  -2.78715   ATCGGGGCAAGCGTA GCCAATAGCCC-G-CC-GCG TTTA CGCCGGTCCGGGAAATTGGC TATAGTGGCGCCATT  43 18
CTM43_RS23370 4749752 .. 4749805 +  -8.8   -5.0133   CGACACCTTCAGCGC CGCGGTGGTGGGGGCGCCGGTGAAA TAGGC TTTC-CCGTCGCTCTCATTCCAGCG TTTTTTGACCGGGTC 100 263
CTM43_RS23380 4751060 .. 4751087 +    -5  -4.23758   ATATTTTTCTACAAA        CTTGGACAAATA ATTT TATTTGTGTAAG         TTTTAAGTATGCCAT  64 183
CTM43_RS23385 NONE
CTM43_RS23390 NONE
CTM43_RS23395 NONE
CTM43_RS23400 NONE
CTM43_RS23405 NONE
CTM43_RS23410 NONE
CTM43_RS23415 NONE
CTM43_RS23420 NONE
CTM43_RS23425 4758456 .. 4758470 +  -4.2  -3.43961   GGTCGCACGATCGCG               CCGTAG TTT TTGCGG               TTGTCGGTGTTGTCC  49 493
CTM43_RS23440 NONE
CTM43_RS23445 4764761 .. 4764789 + -14.6  -3.91144   AGTAAGAGTGTGTGA        GCCCACGCTACC GGTAA GGTAGCGTGGGG        TTTGTGAACTGTGGG 100 36
CTM43_RS23460 NONE
CTM43_RS23465 NONE
CTM43_RS23470 NONE
CTM43_RS23475 4771057 .. 4771069 +  -3.5  -3.56325   ATCACAAGCAATTGA                TTTAA AAA TTAAA                TTATAATTATGACAC  50 129
CTM43_RS23480 NONE
CTM43_RS23485 4773699 .. 4773710 +    -3  -3.81951   GGTTAATTATTCAAA                TTGA GAAA TCAA                 TTTCATAATGTAAAA  54 487
CTM43_RS23490 4775043 .. 4775056 +  -3.1  -3.63569   ATCAAGGATATAGAT               TATGC AGAA GCGTA                TTATTGCAGGATTAA  51 49
CTM43_RS23495 NONE
CTM43_RS23500 4777642 .. 4777658 + -13.7   -5.1861   CTTTGGATCCTCATT              GGCCTGC TTT GCAGGCC              TTTTTTCATACTCAC 100 169
CTM43_RS23520 4782490 .. 4782500 +  -6.8  -3.66908   AAATGATTCAATAAA                 CGGA TTA TCCG                 TTGGTTTTCCGGGGC  63 369
CTM43_RS23530 4784046 .. 4784063 +  -2.7  -3.97026   AAAAATAAGGATAAG             GACGAAT GGCT ATTGGTC              ATTTTTTATTTAGGG  56 450
CTM43_RS23535 NONE
CTM43_RS23540 4785440 .. 4785457 +  -8.4  -4.45945   GAAATGACTGTCAAA             GGCTGG CGAGAT CCAGCC              TTTTCCTTCCTCCCT  80 34
CTM43_RS23545 NONE
CTM43_RS23550 NONE
CTM43_RS23555 4788111 .. 4788124 +  -2.3  -3.71527   TACATTGGAAGAAAA               CCAGG TTCA CCTGA                TTCCTTTCTTACTAT  51 375
CTM43_RS23570 NONE
CTM43_RS23575 NONE
CTM43_RS23580 NONE
CTM43_RS23585 NONE
CTM43_RS23590 NONE
CTM43_RS23595 4799060 .. 4799073 +  -3.1  -4.27316   AATAAACCTTCAAGG               CTCGT CGTT ATGAG                TTTTGAATTAAACGA  59 13
CTM43_RS23600 4803360 .. 4803372 +  -3.3  -4.04174   CTGGTTTATAGAGGT                GACGC AAT GAGTC                TTTACTTATCTGCAG  58 30
CTM43_RS23605 NONE
CTM43_RS23610 NONE
CTM43_RS23615 4807133 .. 4807152 +    -2  -2.76969   ACCAGGATGTATTGG            TCCACAGC TTAG GCTGTAGC             GTTTGGAATACATTC  40 109
CTM43_RS23620 4807588 .. 4807614 +    -3  -3.60048   AGAATTCACTATGAG         GTGTTGATGTGA ATA TAAAATCAGCAC         ATTTTTTGCCAGGGA  49 14
CTM43_RS23625 4809184 .. 4809207 +   -16   -3.3514   TGAGTTAAGACAAAA          GCCTCTCCCC ATTC GGGGGGAGGC           TTCTCAGCTATAAAT 100 144
CTM43_RS23645 NONE
CTM43_RS23650 NONE
CTM43_RS23655 4814682 .. 4814706 + -16.4   -4.1196   CTGATGGTTCTCTCC          CGCCGGGCGG CCCGC TCGCCCGGCG          TTTTCCCCGTCGCTT 100 37
CTM43_RS23660 NONE
CTM43_RS23665 NONE
CTM43_RS23670 NONE
CTM43_RS23675 NONE
CTM43_RS23680 4820211 .. 4820227 +  -6.5  -2.77899   TCACCGGCGGGCGGA              CGTCCTT CAG ATGGACG              TGGTTGATGCGCGGC  49 457
        iolC 4827243 .. 4827273 + -14.1  -5.28414   CCGCTGATCCCCCGA      CGCCCGTCTCCGTCA CCT TG-CGGAG-CGGGCG      TTTTTCTGTTTCTTC 100 34
CTM43_RS23710 4828362 .. 4828389 + -11.2   -2.6927   GTGTCTGCGGTGTCC        TGCCCGGCG-GCG CTG CGCTTGCCGGGCC        TGGTGTATAGGGACT  72 144
CTM43_RS23735 4833209 .. 4833226 +  -4.1  -3.04398   ACCCTCACGGTACAG             CGTGCGCG GCG CGTG-ACG             ATTTTCCCAACGCCG  47 42
CTM43_RS23740 4834800 .. 4834821 + -15.9  -3.28269   AAGCGCTAAAAAAAA           GCCCCCTCA TCGC TGAGGGGGC            TTACGTTTCAGGCTT 100 32
CTM43_RS23755 4837137 .. 4837155 +  -3.1  -4.36914   ATTAAATGACTCATC             GGTTCTG CATGT CAGGATC             TTTTCTGACGAACCC  62 32
CTM43_RS23760 4838984 .. 4839009 +  -8.9  -3.85909   AGATGCCGTTTGTAG         GCCGGGTAAGCG TAG CGCC-GCCCGGC         TTTGCATTTAAATCC  76 87
CTM43_RS23765 NONE
CTM43_RS23770 4842349 .. 4842374 + -16.1  -5.24531   GCGCTATGATCCTCC         CGCCCCTTGCC ACCC GGCATGGGGCG          TTTTTTATGAAACAT 100 32
CTM43_RS23775 4842987 .. 4843042 + -21.3  -2.87931   CGATATCGCAGGCGT CCCCGG-TAGCGCTGCGCTTA-CCGGG GCTA CACGGCTAAGCGTAGCGCGAGCCGGGG TATGTCCCGGATGGC 100 46
        argF 4845701 .. 4845728 +  -4.8   -4.2558   TCTCCATAATGAATA        GGCTGATGCTGG CTAT CCAGAATTAGCG         TTTTCATCAGGAATA  67 83
CTM43_RS23825 NONE
CTM43_RS23830 NONE
        pyrB NONE
CTM43_RS23840 4853842 .. 4853859 +  -3.4  -3.17051   ATTATGTGGTGCTGG             CCAACT AAATGC GGTTGG              TATTGGTGGTAGGCC  46 18
CTM43_RS23845 4854412 .. 4854428 + -13.7  -5.12617   GTCGGCATGAAAAAA              GGCAGCC AGT GGCTGCC              TTTTTTACGTGGTTC 100 49
        treR 4858499 .. 4858510 +  -5.8  -4.10164   CGCCCTCAATTAATC                TCGC TCGG GCGA                 TTTATGTGATCGTCG  66 28
        treB 4860057 .. 4860075 + -17.4  -2.70932   CTAACTTCTTCTTTC             GGGGCGCC TTT GGCGCCCC             TCGTTGCAGCAGGAA 100 37
        treC 4861754 .. 4861791 +  -6.1  -3.15544   GGCTGCAGGGATAAC   GCTTTTCCCCGGTG-GCG CAA CGCTCACCGGGGCTACGA   TTCGTCAGGCTGGAA  55 27
CTM43_RS23890 4865904 .. 4865926 +  -8.5   -2.8939   ATTGCCTGAATATTT          GCCCGTTTCA TGCG TGAA-CGGGC           TCGATTTTTGCTTAT  59 32
CTM43_RS23900 4868486 .. 4868498 + -10.5  -3.30124   CCGTTCCCGGATCGC                GGCGC GCA GCGCC                TTATCCGGGCTACCA  75 119
CTM43_RS23905 4869469 .. 4869482 +  -3.7  -4.09739   CCAGACTCACCTTAA               CCCCC GGCC GTGGG                TTTTCCAGCCGTTCG  60 329
CTM43_RS23980 4881215 .. 4881227 + -10.5  -3.30124   AGTCTCCCGGATGGC                GGCGC GCT GCGCC                TTATCCGGGCTACGG  75 64
CTM43_RS23985 4883434 .. 4883447 +  -2.3  -3.38046   GGGCGCGCGTCAGGA               TCTGC GCCA GCAGC                TGTTTACCATAGCCG  46 317
CTM43_RS24000 4886340 .. 4886367 +   -17  -4.16016   CCTAAGCGCCCTGCC        CGCTCCTCCCGC GCCT GCGGGAGGAGCA         TTTCTTAGCGACTCC 100 36
CTM43_RS24025 4891920 .. 4891938 + -11.7  -2.70932   AGTAATTCTGTCTCA             GGCAGGG TCATC CCCTGCC             TGATTGCGGCACGGA  75 36
CTM43_RS24030 4893236 .. 4893258 +  -3.2  -2.78816   GGCTTCCGCGATGTG           GCTGGCGAAG GAT CATCTCCCGC           TCTGGTAAGGAGTGG  43 90
CTM43_RS24035 4894801 .. 4894831 + -13.3  -3.33911   GACACTATGAGCGCC       CAGCCACTGGGCG TTGGT CATCCAGTGGCTG       TTGCCTTGTTTGCGT  83 333
        msrA 4901318 .. 4901340 +  -7.7  -5.47431   TAGCCAGTGTGACAG           CCGGTCC AGCGCCTTC GGACCGG           TTTTTTATGTATTCC  95 112
CTM43_RS24060 4902773 .. 4902792 + -13.6  -5.64274   TTTTCTCTCTCCTAA            GGGCGGAT GACC ATCCGCCC             TTTTTTTATGGCTCG 100 49
CTM43_RS24065 NONE
CTM43_RS24070 NONE
        araC 4907123 .. 4907145 + -13.4  -4.21462   AGGGCTAAAAACATC           AACGGCTCCC ATC GGGAGCCGTC           TTTTACCTACTACGT 100 33
CTM43_RS24085 4908658 .. 4908677 +  -3.4  -4.18018   CCGGCGCATAGACAA            CGCCCAGC GTCG GCTTGCCG             TTTTCAATCAGCGCG  60 419
        cpdB 4911170 .. 4911196 +  -9.4  -2.70932   CGCTTACCGGGGCTA         CAGGGAGTGATA CAT TTTCACTCCCCG         TGGTTAGCCAGCACC  63 63
CTM43_RS24105 NONE
CTM43_RS24110 NONE
CTM43_RS24115 4914481 .. 4914499 +  -4.6  -3.72742   TTCCCTCGCCAAAAA             GATGCATT TAA AATACATC             TTATATTCCTGATGA  57 61
        ytfE 4915236 .. 4915252 + -10.1  -5.24129   TTGTCCGTCTTATTT              GGCCACT CCG GGTGGCC              TTTTTTATGACGGGC 100 71
CTM43_RS24135 4918571 .. 4918599 + -14.6  -3.61517   AAAGGCGCTAAAAAG        CAAAACGCCGGC ACAAG GCCGGCGGTTTG        TTGTTACCAGAACGT  93 80
CTM43_RS24160 NONE
CTM43_RS24165 4922236 .. 4922248 +  -6.9  -3.34398   CACCGCGTTGTGTAC                CGCCT CGT GGGCG                TCTTTGCCCCAGGCA  58 239
CTM43_RS24200 4927956 .. 4927968 +  -4.7  -3.54181   TGCCTGCCGGAAATA                CCCCG CCG CAGGG                TTAGTATTTTCACAT  55 59
        ulaR 4928982 .. 4929008 +  -8.6  -2.60901   GCGGCCGCCGGGCAA         GGGACGCCAGCT GAT GGCTGACATCCC         ATTCGTTGAGGCTAT  57 222
        bsmA NONE
CTM43_RS24220 4930706 .. 4930735 +  -8.4  -3.14132   ACCTCCGCACACTCC       GCGGCCAGCAGC TCCATC GCCGCCGGCTGC        TTGCTGAGCACCCGC  60 302
CTM43_RS24255 4938177 .. 4938195 +   -16  -4.24123   CGCAGCATGAAAAAA             GGCGCCTG TTT CAGGCGCC             TTTTCGCATTATTAC 100 51
        queG 4949933 .. 4949949 + -10.9  -2.62616   TCGAACTCGCGACCC              CGACCTT GGC AAGGTCG              TGCTCTACCAACTGA  66 329
CTM43_RS24330 4951308 .. 4951335 +  -6.9  -3.61764   ACGCAGAAAAGTGTA        CCG-GGCCGCGC ACAGG GCCCGGTCGCGG        TTTACAGCTTAATGA  63 40
        rsgA 4953183 .. 4953196 +  -4.5  -3.09288   AGGAACGACATATCA               TGGCC TGGA GGCTA                CTTTGTTAAACGATC  49 170
CTM43_RS24350 NONE
        mscM 4957521 .. 4957548 + -18.4   -3.4404   AGCCTGTAAACCATC        CCCTGCCCGGCG GCAC CGCCGGGCAGGC         TCTTTAACTCTCCAT 100 32
CTM43_RS24370 NONE
CTM43_RS24375 NONE
        frdC NONE
        frdD 4963794 .. 4963819 + -14.7  -2.56596   TCTGATCCTGCAAGA         GCCCGGTCGCA TTTA TGCTACCGGGC          TCGCTTCATAGAAAA  89 36
CTM43_RS24390 4964578 .. 4964589 +  -4.4  -3.15027   ACGGCGTAGGCGGTA                CCTA CCGG TAGG                 GTTTTCATCGCCCAT  47 173
        epmB 4967032 .. 4967083 +  -5.8  -2.71712   AGGGCTGAAGCAGCG TTAATAAACTGAAGGTCTGCCAGG ACGT TCTGGCAGACCTTCGGATAGGAAG ATTTCGACAGACGGG  51 22
CTM43_RS24425 4968855 .. 4968877 +  -9.1  -4.66833   CTAATTTTTTCCGAA          GGGCACCGCT TTAC GGCGG-GCCC           TTTTTCGCATTCAGA 100 37
CTM43_RS24430 4969577 .. 4969617 +    -2   -2.9914   GGTCGCTCTATTCCT  CATCGCTGTAATAAGAAA TTTAT TTTATCATTATAGGGATG  TGTCTATGCCAAATA  42 15
CTM43_RS24435 4972141 .. 4972161 + -14.1  -2.56164   AAGCGTCTGGCATCA            GGCAAATCG AAA CGATTTGCC            GTTAGTCATTCACAG  87 0
CTM43_RS24440 4973203 .. 4973227 +  -6.6   -4.1891   AAAGGAATGATGGAA          GTTGTTATTC AGGAA GAATAATAAC          TTTGTATTGAGGGGG  71 5
CTM43_RS24445 4973777 .. 4973788 +  -2.2   -2.7497   CAAGGTTTAGTTGAT                GGCA CCTT TGTC                 GTTTGGAAATAATCT  40 2
CTM43_RS24450 4974282 .. 4974297 +    -9  -3.75897   TACTATATATTCAAA              GGCTCA TTTA TGAGCC               TTTGAATTAACCGTT  74 72
CTM43_RS24455 NONE
CTM43_RS24460 NONE
CTM43_RS24465 4978766 .. 4978797 +  -9.2  -3.53012   CGTAAATCACGTTGC      CGCCCATCGCTGCC GCCT GGTTGCGCAGGGCG       TTTGCCGCACCGCGC  69 184
CTM43_RS24485 4983082 .. 4983103 +  -8.1  -4.57569   CTCGCCCGCGGCCAT           CTTC-TGCTG CAT CAGCAGGAAG           TTTTTGAAGCCCTGG  83 371
        aspA 4985061 .. 4985082 + -13.1  -5.54079   GGTTAGTCATTCAAA           GGCATGTCA GCGA TGACATGCC            TTTTTTGCTTTTTGG 100 48
CTM43_RS24505 4986467 .. 4986489 + -17.7  -3.18274   GTAAATACCGCTGGC           GGCGGGCCC ACTAC GGGCCCGCC           TTCCGTTGCCCTCAC 100 37
        cutA NONE
        dsbD NONE
CTM43_RS24520 NONE
CTM43_RS24525 NONE
CTM43_RS24530 4991645 .. 4991661 + -10.8   -5.1417   CCACTATTTAAAGAA              CCCGCC CAAAA GGCGGG              TTTTTGCTTTTCTGC 100 38
        pgaA NONE
        pgaB NONE
        pgaC NONE
        pgaD 5001469 .. 5001488 +  -7.1  -5.14563   CTGGACAGGTAATAC            GCCGG-GG ATTAG CCGCCGGC            TTTTTTGATGGCGGC  88 63
CTM43_RS24575 NONE
CTM43_RS24580 5003179 .. 5003208 +    -7  -3.57309   AAGACTAATCTTATC       CACGGCGCCGTC TACCCC GACGGCGTCAAG        TTTCCGCCACTTTTC  64 33
CTM43_RS24585 NONE
        cbpM 5004527 .. 5004562 +  -4.6  -3.53444   CCTGGCGCGCTTCCT    CGCCCACGGATAGGGGT GCC ATCCCGGGTCGTG-GCG    TTCCTTCTTCGCGCC  55 13
        melR 5010457 .. 5010482 + -16.9  -2.72344   CGAAGGCATAAAAAA         TGCCGCC-GGGG TTT CCCCAGGCGGCA         TGATTAACAGTGAAA 100 30
CTM43_RS24630 5012506 .. 5012521 +  -3.2  -4.57073   CTCAGCCGCTGTTTA              AAGGAC CAAC GTCCTG               TTTTTCGACGACATC  66 70
CTM43_RS24635 5012892 .. 5012940 +  -6.9  -2.82635   AGAACTGATTTAATT TCGGGTAGGCGGCG-CGATTATTT TTTC ACATAACCGTCGCCGC-T-CCCGA TATCCTGGTGGCCGT  54 33
        yjdN 5013556 .. 5013572 + -15.1  -2.79183   AGGCTGACGCCCCCA              GGGCGGC CCG GCCGCCC              TGTCATCCGCCTGGC  95 34
        phnF NONE
        phnG NONE
        phnH 5015440 .. 5015454 +  -2.7  -2.82015   TGGCGATCCCGCGCA               CCACC CACGT GGAGG               TGTGCTAAATGTACG  42 3
CTM43_RS24660 NONE
CTM43_RS24665 NONE
        phnK 5018159 .. 5018170 +  -2.2  -2.82895   GCTGCGCCTTACCCG                GC-CC ACA GGTGC                GTTATTCGTAGGCCG  40 61
        phnL NONE
CTM43_RS24680 NONE
CTM43_RS24685 NONE
        phnP 5021417 .. 5021430 +  -8.1  -2.71325   ATCAGTAGCTATCAT               CCAGC CGAC GCTGG                TCGCTTTCTAACTGA  58 61
CTM43_RS24705 NONE
CTM43_RS24710 NONE
CTM43_RS24715 NONE
CTM43_RS24720 5029167 .. 5029186 +  -6.5  -4.07687   AGTAAAAAATCGACA            TCCTGTT GTGTGA AACAGGA             TTTTAACGCAGCAAT  66 331
CTM43_RS24740 5034249 .. 5034298 +  -4.3  -2.78101   CGGCGCTGCGCTTGC GCGGGCCTACGGTCAGGTAGCGC AAATCG GCCTTACCT-ACCG-ATACCCGC CATTTTCTTCTTTTT  45 373
CTM43_RS24745 5035050 .. 5035083 + -15.3  -4.64334   ATCAGTAAAGGATAA     GAAAAAGCCCGGCGC TATC GCGCCGGGCTTTGTG      TTTTATTGGGCGGTT 100 26
         acs 5038802 .. 5038838 +  -2.2  -3.64703   TACACCCTCTCCCCT    TCCGGGGAGAGG ATAAAAATAAGTC CCTCCCCCAGGA    TTTCACTCGCAGGAA  50 57
CTM43_RS24770 NONE
        actP 5040926 .. 5040955 + -15.8  -3.33969   GCATTAATCGTCCTC       TCCCTTCCCCGG CATCGT TCGGGGAAGGGA        TTCTCCCCTCAGTTA 100 34
CTM43_RS24815 5049219 .. 5049258 + -10.8  -3.82486   TTTACTGCAGTCTCG  CCAGTAGTCCGAATAAGCG TCG CGCT-ATCCGGATTACAGG  TTATTGATCTTCGAT  85 148
        soxS 5054730 .. 5054743 +  -8.1  -3.34787   CAGCTTACCTGCTCC               GGCGT CTCC ACGCC                TTCTGCAATCGTCTT  61 164
CTM43_RS24855 5056978 .. 5056994 + -12.3   -5.1417   ACCTGAGGTTAAAAA              GCTTCCC GAC GGGAAGC              TTTTTCGTTTTCTGC 100 35
CTM43_RS24880 NONE
CTM43_RS24885 5062882 .. 5062894 +  -6.2  -3.22874   TAACCTTAATTCACC                GGCG CACGT CGCC                CTTTGTTATCTGAGA  55 0
CTM43_RS24890 NONE
CTM43_RS24910 5067598 .. 5067621 +  -5.9  -2.64803   ATAGCCAAGCAGTGG          CGCCTCGCC AGGGAA GGTGAGGCA           TAGGTTTCGCCATCC  51 325
CTM43_RS24915 5069435 .. 5069463 + -18.9  -3.36492   CACTGTTCAATAAAC        CCCAGGGCTCCTC ACT GAGGAGCCCTGCG        TTATGGGATTGGCCG 100 28
CTM43_RS24920 5070058 .. 5070077 +   -10  -3.80573   TCTGAAATAAAAAAA            CCGGGTCGC GCT GC-ACCCGG            TTTACTCCTCATCAG  79 249
CTM43_RS24930 5074588 .. 5074606 + -13.1  -4.45771   AATAACAAAGAAAAA             GCCCCGG CGAAA CCGGGGC             TTTCTGTTTTCGACT 100 89
        uvrA 5078264 .. 5078288 + -15.8  -4.08945   AATTAGCGGGTAAGC          TGCTGCCGGA CCGGC TCCGGCAGCA          TTTTCACCGCCTGCT 100 39
CTM43_RS24980 5085132 .. 5085160 +  -7.4  -5.95166   CAGAAGGGGCAAAAG        TTTAGGGCTTCC ACCTG GGAAGCCCTTAC        TTTTTTTTAGTTCGG 100 46
CTM43_RS25000 5088472 .. 5088499 +  -9.8  -3.08996   ACGCGAAGAGGATGT        TCCCGGCTT-GCG CCA CGCTGAGCCGGGC        TATTGAATCGCCCTG  69 469
CTM43_RS25025 5093596 .. 5093612 +  -9.3  -3.72576   GAGCGTCACGCAGGA              CGACGCG TAA CGCGGCG              TTTGCTGCCCCCCGG  74 16
        malE 5100354 .. 5100385 +  -2.2  -2.74784   CTACGGCTCGGACCG      TAGGTCAGGTAAGCG AAG CGCC-ACCTGACAAA      TAAGTTTTCACCGCT  40 80
        malF NONE
        malG 5103035 .. 5103051 + -10.8  -6.09888   TGTGACTGTTGGTCA              GCGGCC CTGGA GGCCGC              TTTTTTTTATTCGCG 100 194
CTM43_RS25080 NONE
CTM43_RS25085 NONE
CTM43_RS25090 NONE
CTM43_RS25095 5106668 .. 5106696 +    -3  -2.74215   GCTAACCCCCAGGCT        GGAGGGAGCG CCTCCAGCC CTCTCCCACC        GATTTTTGTCGTTCC  41 36
CTM43_RS25100 NONE
CTM43_RS25105 5107746 .. 5107765 + -13.6  -3.19522   GGCTATAAATAAAAA            TGCCGACC AAAG GGTCGGCA             TTCCGTCTTAGCTGC  88 33
        lysC 5111582 .. 5111599 +  -9.8  -5.24129   TAAACAATACCTATA             GCCGGG CTCGAA CCCGGC              TTTTTTATAACAACA 100 56
CTM43_RS25130 5112620 .. 5112658 + -11.7  -3.91911   GCCGACAAGCGCTGA  GCGTG-ATACGTCCGGGC GCAG GCCCGGGCGTGTGCCTGC   TTTAGTTGCCATACA  88 26
CTM43_RS25135 5113000 .. 5113013 +  -3.7  -4.89063   ACGCCGACCCGCGGC               AGGCG TTAA CGCCC                TTTCTTTTTACGTCC  73 17
CTM43_RS25145 5115189 .. 5115220 +    -5  -3.01726   ATAACACACAGGATA      TGATTTCACGCAGC ACCC GCTGCGGGGTATCC       CTTTATCTAAAGAAA  49 37
CTM43_RS25150 NONE
CTM43_RS25155 NONE
CTM43_RS25160 NONE
CTM43_RS25165 NONE
CTM43_RS25170 NONE
CTM43_RS25175 NONE
CTM43_RS25180 5120960 .. 5120977 +  -2.7  -3.70149   TATCCCCCAGCAGCG             CCAGGTGC AAC GTAC-TGG             TTTCGATGCTCTGCA  51 214
        iclR 5127333 .. 5127347 + -11.4  -4.18494   GGGTTAAATAAAAAA               TGCCCC AGA GGGGCA               TTTTAAGTAGGCCTG  91 30
CTM43_RS25220 5134209 .. 5134242 + -13.9  -4.50627   TTTTTAAACGCAAAA     ACAAAAAGCCCGGTC TTTC GACCGGGCTTTCTGC      TTTATTTGATGCCTG 100 176
        purH NONE
        purD 5142816 .. 5142843 + -10.4  -5.00616   GTAATGCCTAACTGA        CGGGCGGCTTCG GTTT TGTTGCCGCCCG         TTTTTTCCAGCGCCG 100 64
        zraP 5146544 .. 5146565 +  -3.6  -3.07192   AAGCTCAGATCGCCC           TGCGCGTC GAAACG GGCGCGAA            TATGTTCCGGCGGTT  45 393
CTM43_RS25300 5151169 .. 5151184 +    -9  -3.97088   AATTTACGTACATTA              TCCCTC TGCG GAGGGA               TTTCATCTTGTCGGA  78 61
        thiC NONE
CTM43_RS25310 NONE
        thiF NONE
        thiS NONE
CTM43_RS25325 NONE
        thiH 5156843 .. 5156884 +  -9.5  -4.76123   CCGACGCCGTTTTTC TATTCTGCCCTGGTCAGC AGCGGAC GCTGACCAGGGC-GAACC TTTTCTTCCTCATTT 100 108
CTM43_RS25335 5158628 .. 5158643 + -10.4  -6.04324   TTCAGCGCCGCCACC              GCCCAC TTCG GTGGGC               TTTTTTATTTTTTCC 100 44
CTM43_RS25340 NONE
CTM43_RS25345 5159423 .. 5159444 + -15.1  -2.93073   ATCTCACGGATTTAA           CGGGCGTCG CTGC CGGCGCCCG            TCCTTCTTACAGAAA 100 40
CTM43_RS25425 5176874 .. 5176889 + -10.4  -5.55769   ACGTAAATAAAATAA              GGGAGC CGAA GCTCCC               TTTTTTATTCTGCAC 100 31
CTM43_RS25485 NONE
        fadB NONE
        fadA 5192487 .. 5192505 +  -9.5  -5.79595   TTAGTTGCCGTTCTT             CCCGCCT GTCAG GGGCGGG             TTTTTTATTTTCAGA 100 103
        rfaH 5195440 .. 5195455 +  -4.6  -3.57144   ACGCCAAACAGCGCC              CTGACG TTTG CGTCCG               TTTGCGCCTCCAGCC  53 56
CTM43_RS25560 5204478 .. 5204493 + -10.4  -5.18355   CTAAGCATGAAAAAA              GGAGGC AAAT GCCTCC               TTTTTGATTTTTCGC 100 46
        metR 5208072 .. 5208097 +  -5.3  -2.72344   TCATGATCCCCAGCG         TGCCGGCATCC ACCT GGGTGGCGCCA          TAGTTCCACATAAAG  48 116
CTM43_RS25590 5211473 .. 5211504 +  -4.3   -3.0407   CAGGTGAACGACGCT      TTCTCTCTGCGCG AGCCGG CGCGCAAAGTGGG       TAATTAATTTTTTTG  47 74
CTM43_RS25595 5212871 .. 5212882 +  -2.2  -4.13561   ACCTGCGGCTCCGCC                GAGG CCAC CTTC                 TCTTTTTTCAGCGCG  59 389
CTM43_RS25615 5216586 .. 5216600 +  -7.1  -2.60075   TTGCCAGCGCAACGG               CCACC TATAT GGTGG               GTTGATTGGCCAAAA  56 6
        rarD 5217570 .. 5217585 + -10.4  -5.40072   TCAGCCAGTAAAGAA              GGGAGC CGAC GCTCCC               TTTTTTTACAGCCAG 100 48
        cyaY 5224993 .. 5225005 + -10.5  -3.28791   TGTTTCCCGGATAGC                GGCGC ATC GCGCC                TTATCCGGGCCAAAT  75 46
CTM43_RS25675 NONE
CTM43_RS25680 NONE
CTM43_RS25685 NONE
        hemY 5232021 .. 5232048 + -17.8  -2.57463   GCCATAACCTGGCAT        GGCTATCGCCTC CTGC GGGGCGATAGCC         CTTCTCCCCCGCCTT 100 34
        rhlB 5251205 .. 5251220 +  -5.4  -2.64616   CAGGGCGACCTTCCT              CTG-GCG ACC CGCTCAG              TGATGTGGATCGGGC  48 78
CTM43_RS25805 NONE
CTM43_RS25810 NONE
CTM43_RS25815 5254869 .. 5254894 + -14.8  -5.06414   ATTAATTTAAATATT         TCAGGGCCTG TATATT CAGGCCCTGA          TTTTTATTAGGGAAA 100 40
CTM43_RS25820 5255627 .. 5255649 +  -2.6  -5.12707   CGCCGCCTGGCAGCA           GTTTATCGCC TGA GACGCTAAGC           TTTTTTCGCCTTTGC  74 13
CTM43_RS25830 NONE
CTM43_RS25835 5258401 .. 5258422 + -12.3  -4.68593   GAAATAATAAAAAAA           CCCGGGGAT CTTA ATCTCCGGG            TTTTTGCCTGATGGC 100 34
        ilvY 5261136 .. 5261174 +  -6.6  -2.71263   AGGAAAAAGCGGAAT   GCCGGGTTATGCGTTTCG TCG TGGCACTCATAGCCCAGC   TCATTGAGACGAGTT  49 47
CTM43_RS25880 5269535 .. 5269546 +  -7.2  -5.52023   GATGGCGTAAAAAAA                GGGC TTAC GCCC                 TTTTTTCTTAGTCAT  93 31
        hdfR 5270912 .. 5270931 + -10.8   -3.8211   AGAGATAAAAAAAAA            TCCTTTGC CTGA GCAAAGGA             TTCTTATAAATGGCA  85 105
        trmA 5280806 .. 5280826 + -11.9  -5.42259   ATAGGCCCAAAAAAA            CCGGCAATG TCA TATTGCCGG            TTTTTTTACCGCTGG 100 37
CTM43_RS25955 5283433 .. 5283457 +  -2.2  -3.31144   GTTGCCGCGCTGAAC         GGC-TTAAACC GCCT GTTTTAACGCC          TTGTCGAAATGGCCA  45 5
CTM43_RS25975 5286189 .. 5286207 +  -7.4  -3.28001   ACGACCCAGAGCACG             TGCGGC GTCAAGG GCCGCA             TTCACTTTAACAATC  56 86
CTM43_RS25990 5289181 .. 5289194 +  -6.7  -2.78798   TCCCGGGGCGGAACG               GTGAC GATC GTCAC                ATTTCCATAAGCGAT  54 67
CTM43_RS25995 5292058 .. 5292079 + -15.1  -4.10007   CGGTTAATCTATCTC           TCCCCGGCC GCCC GGCCGGGGG            TTTTCCGCCCGTTCT 100 34
CTM43_RS26005 5293826 .. 5293837 +    -3  -2.78216   CAGCGCCGATAAATG                TGAT CTAA ATCA                 TCCTTAATCACGATG  42 97
         fsa NONE
CTM43_RS26015 5295793 .. 5295812 +   -15  -5.29782   TAAACCAGAGCAAAA            CACCCGGC GACA GCCGGGTG             TTTTTTATGCATCTC 100 38
CTM43_RS26035 5299359 .. 5299393 +  -5.8  -4.21438   TGCGGCCCACTGATC    GCTT--AAGGCCGGGC TGACT GCCCGGCCTTAAAAAC    TTATTTCTTCACATC  69 28
CTM43_RS26045 5302272 .. 5302290 +  -8.1  -3.31144   GCGCCCGGCGCCGGG            CCCGC-GG ATCA CCAGCGGG             TTATCGCGATACCAG  59 72
        metJ 5306392 .. 5306412 + -12.6  -5.63517   CTGAGACGATAAAAA            GGGCGGAA TAATC TTCCGCCC            TTTTTTCTTTCCCGC 100 37
CTM43_RS26070 5309134 .. 5309148 +  -5.7  -3.01791   GATGTCGATCCGATT               GAAGG ATAAG CCTTC               TCTTGCGAGCCGGAT  53 17
        cytR 5310326 .. 5310341 +  -6.8  -2.56271   TCAGACGATAACCAT              CAGGCT TTCG GGCCTG               CTCTTCTGGTCAAAG  52 30
        ftsN 5311399 .. 5311425 + -10.7  -3.15366   CATCTATAATTGCAT         TCGGCCCCGCG GACAG CGCGGGGCCCC         TGTTCCGCTTTTGCA  76 59
        hslV NONE
        hslU 5313362 .. 5313379 + -12.7  -5.10461   TTTCATCACTGTTGA             TGGGGGC TATC GCCCCCA              TTTTTATTGGCTAGA 100 56
CTM43_RS26095 5314332 .. 5314346 +  -5.8  -3.08032   CTTAACTGACAAATA               TCAATT AAC AATTGA               TGATTTTGCCAACAA  53 36
        rraA 5314913 .. 5314943 + -15.6  -3.86015   AAACCTTCCGCCATA       AAAAAGGCCTTCTC CAT GAGAAGGCCTTTTG       TTTATCCGGCGCGTA 100 39
        cpxR NONE
        cpxA 5319963 .. 5319981 + -10.3  -2.62263   CGGGAATACTTAATA             TGGGGGA TTATT TCCCCCA             TAATCTCCGCGAACT  69 86
        rhaT 5322977 .. 5323002 + -10.3  -3.85698   ACAAAGGGGCGGCTA         AGGCTGGCCGC CAGC GCGGCCAGCAG          TTTGTCCAGCAGCGC  77 341
CTM43_RS26155 NONE
CTM43_RS26160 NONE
        rhaA 5327511 .. 5327550 + -16.5  -3.53444   CCGGGTCGCGGCTGA  CGCCTTACCCGGGCTAC GAACCG GTAGCCCGGATAAGCCG   TTTACGGCGCAATCC 100 54
CTM43_RS26170 NONE
        rhaS 5329597 .. 5329617 +  -4.6  -3.05935   GCCCTCTGCGCGATG           CGG-CCAGC GGAC GCCGGACCG            TTCCCTCGCCCCTGT  49 92
CTM43_RS26180 NONE
CTM43_RS26185 NONE
CTM43_RS26190 5333197 .. 5333255 + -14.4  -2.72511   AGCGAAGACGATGTT AATTTCCCCCTCACCCTGGCCCCCTCCC TGC GGGAGAAGGTCGGGGTGAGGGGAAACGG ATTTCCCAAAATCAA  88 24
        fucO 5334427 .. 5334447 +  -6.1  -3.21416   CGAGCTCTATCTGGA            GGCCTTATG ATC CGTAAAGCC            TTCGTCATGCAGGTG  55 16
        rhaM 5334754 .. 5334780 +   -13  -2.52896   CTGGCGTAAAAATAA         CTGGCCTCCC TCCAGAC GGGAGGCCGG         TCGATTAAACGGTCA  81 32
CTM43_RS26225 NONE
CTM43_RS26230 5341124 .. 5341140 +  -7.9  -2.95298   TAACCGGTTCGATTT              GCAGCGG GTG CCGCTGG              TCTATCGTCAGTACA  56 105
CTM43_RS26280 NONE
        fdnG NONE
        fdxH NONE
CTM43_RS26295 NONE
        fdhE 5353179 .. 5353198 + -12.8  -4.59414   TCTGCAGTATGATTT            CGGGCGGC TCTT GTCGCCCG             TTTTCCTTCTTGTGA 100 43
CTM43_RS26315 5355084 .. 5355094 +  -4.6  -2.63616   CGCCAGGACGATAAC                 TGCC CCA GGCG                 CTTACTCTTCCTCGT  46 27
CTM43_RS26345 5361792 .. 5361809 + -11.3  -5.24129   CCGTGGAAACTTTCA             GCCCATC TCAG GATGGGC              TTTTTTCTCCACCAA 100 101
CTM43_RS26350 NONE
CTM43_RS26355 5364595 .. 5364626 + -17.4  -3.08798   GGCTGTTCAGCTAAT      TGTTCCCCCTCTCC TGCG GGAGAGGGGGAAAA       TATTAAATAACCCGT 100 248
CTM43_RS26375 5367923 .. 5367958 +    -9  -3.23538   GAGTAACCCCCGCTT    TTTCCGGATAACGGCGC GTA GCGCCCT-ATCCGGACG    TTCATACTACGTTGT   0 35
        yihI NONE
CTM43_RS26365 NONE
        hemN 5364594 .. 5364626 - -15.8  -3.05384   GGGCTGTTCAGCTAA     TTGTTCCCCCTCTCC TGCG GGAGAGGGGGAA-AA      TATTAAATAACCCGT 100 28
        typA 5358057 .. 5358083 - -12.3  -5.65513   CAGGAATGAAAAAAA         GAAACCCCGCC GGTGA GGCGGGGTTTA         GCGAACAACAAGAAG 100 47
CTM43_RS26335 NONE
CTM43_RS26330 NONE
         dtd NONE
CTM43_RS26320 5355083 .. 5355094 -  -2.2  -3.44051   TCGCCAGGACGATAA                CTGCC CCA GGC-G                CTTACTCTTCCTCGT  45 27
CTM43_RS26310 NONE
CTM43_RS26305 5352985 .. 5352999 -  -5.6  -3.53224   CAGGCGGCGGTGAAA               GCCGAA AGC TGCGGC               GACTGCGGAACCTAC  55 361
CTM43_RS26275 5346649 .. 5346669 -  -2.5  -3.20348   TTGACCAATATTTAA            CCCGCAA TTAAACG CTGCGGA            TGGGTATAAACTGTC  43 1
CTM43_RS26270 5346268 .. 5346281 -  -9.5  -6.11229   ACGAAAACAAAAAAA               GCGCC CTGA GGCGC                TCTTTCGACAGTTGC 100 48
CTM43_RS26265 NONE
CTM43_RS26260 NONE
CTM43_RS26255 NONE
CTM43_RS26250 5342404 .. 5342419 -  -7.6  -3.61517   ATGTGTCGGTAACAA              CGCTAT TTAA ATAGCG               CCATTTTTTCCATTA  66 12
CTM43_RS26245 NONE
CTM43_RS26240 NONE
CTM43_RS26235 5340538 .. 5340551 -  -2.4  -2.72511   GCCAGCGCCGGAAAC               CATC GGGCTT GATG                CGGTCTTCCCGGCGA  39 515
CTM43_RS26220 NONE
CTM43_RS26215 5338259 .. 5338281 -    -7  -3.60098   ACTGTTGATCCGAAA           CGTTTCGGAT GCC AACCAAAACG           TTTCGGATCCGTGAT  64 75
CTM43_RS26210 5336068 .. 5336084 - -15.1  -3.61715   TATTTTCCTCAAGAA              GGGCCGC AGC GCGGCCC              GATACCATCACACGC 100 33
CTM43_RS26205 5334754 .. 5334780 - -10.8  -4.40561   CTGGCGTAAAAATAA         CTGGCCTCCC TCCAGAC GGGAGGCCGG         TCGATTAAACGGTCA  91 30
CTM43_RS26150 5323555 .. 5323579 -  -9.3  -3.63627   GGCTCACACTCCAAA          CGCGGATAACG GCG CATTATTCGCG          TTTTTAGTCTGCAAT  74 59
        rhaR 5322685 .. 5322703 -    -3  -3.29144   TCATCTGCCTGACAA             CGACGC TCTTCAG GCGGCG             GCGCGACTGCGCTGC  47 16
CTM43_RS26135 5320676 .. 5320693 - -11.3  -5.77988   ACAGATATAAAAAAA             GCGAGTC ATCA GACTCGC              TTCTCTTTTAGCGCA 100 49
CTM43_RS26130 5319961 .. 5319983 - -12.1   -3.1855   CCCGGGAATACTTAA           TATGGGGGA TTATT TCCCCCATA           ATCTCCGCGAACTAT  82 12
        cpxP 5317122 .. 5317140 - -14.6  -5.82388   AAAGGGCAAAAAAAA             CCCCCACA TCA TGTGGGGG             AAGACAGGGATGGTG 100 66
CTM43_RS26110 NONE
CTM43_RS26105 5314918 .. 5314938 - -15.5  -5.24129   TTCCGCCATAAAAAA            GGCCTTCTC CAT GAGAAGGCC            TTTTGTTTATCCGGC 100 48
        rpmE 5306453 .. 5306468 - -11.8   -5.4251   GGGAGAGACAAAAAA              GCCGCC CTGA GGCGGC               TTCTTCTGGCAACTT 100 39
CTM43_RS26055 NONE
CTM43_RS26050 5302023 .. 5302048 -  -3.1  -4.60977   AAGAGAATCAGAAAA         TGGTCTGCCGG CTTG CCGGCACTGCA          GAAGAGAACGCCTTT  69 177
CTM43_RS26040 5299239 .. 5299251 -  -4.8  -3.78775   TGCCGCAGGATTAAA                CGTC GGCCT GACG                CAAGAGGAGATTACG  56 168
CTM43_RS26030 5297885 .. 5297895 -  -5.4  -3.23638   GTAAAGAGTGAGGAA                 TAGG TCA CCTA                 CTTGAAAAAAGTTCA  52 115
CTM43_RS26025 5296821 .. 5296849 - -14.7  -5.75342   TTTGGGCAAAAAAAA        GCGATGGCGAA TACCGGC TTCGCCATCGC        ACTAAACGTTAATGA 100 45
CTM43_RS26020 5295793 .. 5295812 -   -15  -4.40894   TAAACCAGAGCAAAA            CACCCGGC GACA GCCGGGTG             TTTTTTATGCATCTC 100 57
        zinT 5291996 .. 5292015 -  -4.2  -3.61398   CCGCGCGTTGAACAA            GCGCTGAT GGTC ACCATCGC             CGGCGTCGCCGCCGG  51 103
CTM43_RS25985 5286878 .. 5286890 -  -7.7  -3.95378   TCACACCTTAAATAA                GAGAC TGC GTCTC                AGCGAAGCCGAAACG  70 5
        argB 5286066 .. 5286081 -  -2.4  -2.62515   AAGCCCGGCAGACGA              CGCGCC GCCG GGCATG               AAATCTTAAGCCAGA  39 31
CTM43_RS25970 5284565 .. 5284579 -    -7  -5.24129   TTTTTGCATAAAAAA               CCCGGC GTC GCTGGG               CTTGGCCGGGTCAGG  91 60
        oxyR 5283263 .. 5283278 -    -9  -3.57144   TGTTCCATCGGGAAA              CCAAGG AGAT CCTTGG               CATTCACTGCTTTGG  66 183
        fabR NONE
CTM43_RS25945 5280806 .. 5280826 - -11.2  -5.42862   ATAGGCCCAAAAAAA            CCGGCAAT GTCAT ATTGCCGG            TTTTTTTACCGCTGG 100 45
        btuB NONE
CTM43_RS25930 5276688 .. 5276700 -  -6.9  -4.07568   CTTTTTTGTGCAAAA                CGCCC TTA GAGCG                GTAATTTTTCCAGCG  68 18
CTM43_RS25925 5274723 .. 5274736 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGGCAGGTTCTT  39 36
CTM43_RS25920 5274594 .. 5274606 -  -6.3  -3.55622   TGCAACCTCTTCAAA                TTTGC TTC GCAAA                TTTGGTAGGCCTGAG  61 28
CTM43_RS25915 5274440 .. 5274473 -  -6.7  -4.49756   TTTTAAAGAGCAAAA     CTTCGCAGTGCACCT TTTC AGGTTCACTCTGAAG      TTTTCTTGTGTTCGC  77 49
CTM43_RS25910 5271364 .. 5271374 -  -5.4  -3.18912   CGACGTATCGATTAA                 TCTG TAT CAGA                 GCTGAAAATTCTCTC  52 57
         rrf NONE
CTM43_RS25900 5271023 .. 5271069 - -11.1  -3.05046   CTACGCCCCTAAAAT TTTCTTACCACTAAGCCTGCT ATTTG AGCAGGCTTAATGTTAAATAA GTGGCGGAACGGACG  74 27
CTM43_RS25895 5270912 .. 5270931 - -10.8  -6.32216   AGAGATAAAAAAAAA            TCCTTTGC CTGA GCAAAGGA             TTCTTATAAATGGCA 100 36
CTM43_RS25885 5269535 .. 5269546 -  -7.2  -5.41143   GATGGCGTAAAAAAA                GGGC TTAC GCCC                 TTTTTTCTTAGTCAT  93 33
CTM43_RS25875 5267508 .. 5267531 - -13.8  -5.64274   TCAGTTATAAAAAAA          CCCCCGGACC TTTC GGTGCGGGGG           TCTTAGTTCGTTAAG 100 50
CTM43_RS25870 5265757 .. 5265773 -  -5.1  -2.64155   GTGCCTGTAAAGCGA              CCTGATG TTG CATCATG              ATAATTTCTCCAGCA  48 21
CTM43_RS25865 NONE
        ilvE 5264540 .. 5264561 - -11.6  -3.72576   TCTGTGTTTATTAAA           TGGGACGG TGCGTG CCGTCCCA            TTTTTAATTACTTAC  85 33
CTM43_RS25855 NONE
        ilvA 5261060 .. 5261076 -  -9.4  -5.60993   TTGCGCACAAAAAAA              GCGGCT GCATG AGCCGC              TTATTGATGCTTTCT 100 60
CTM43_RS25840 5258401 .. 5258422 - -10.1  -6.01369   GAAATAATAAAAAAA           CCCGGGGAT CTTA ATCTCCGGG            TTTTTGCCTGATGGC 100 199
CTM43_RS25825 5255345 .. 5255357 -  -7.7  -3.14344   CATTCTGCTGACCAA                GTCGA TCC TCGAC                TTTTTTACTGCCGCG  57 312
CTM43_RS25800 5251104 .. 5251115 -  -7.2  -3.05384   TGCGCGCCCAGGCAA                CGGC CCGC GCCG                 TAACGGTCCACCGCG  54 81
        trxA 5249102 .. 5249126 -  -2.2  -4.17048   CTTCGGGTAAAACAA          GATTCAAACA AGGTA TGTTTAAAAC          GAAGTCTGTGGATTA  57 115
CTM43_RS25785 NONE
         rho 5247583 .. 5247612 - -15.1  -3.14991   TACAAACCCCAAAAT       GAAAACGCCACGC AAAG GCGTGGCGTTTTT        GGCTTTTTTTACCTT 100 39
CTM43_RS25775 NONE
CTM43_RS25770 5245230 .. 5245241 -  -3.6  -2.69964   GCCGCAATCACAGGA                CACG ACGA CGCG                 ATAACGCCACGCCTG  42 6
CTM43_RS25765 NONE
CTM43_RS25760 NONE
CTM43_RS25755 NONE
        rfbA NONE
CTM43_RS25745 NONE
CTM43_RS25740 NONE
        wzxE NONE
CTM43_RS25730 NONE
CTM43_RS25725 NONE
CTM43_RS25720 5234461 .. 5234500 -  -2.7  -3.03781   TTAACTGAAACCATA  GCCTTGCCGACGCGCAGG TCTCC CCGGCGCGTATG-AAGCC  TGCGAATGGTTAATT  43 129
CTM43_RS25715 NONE
CTM43_RS25710 5232811 .. 5232828 -  -2.5  -3.13504   GCGGTATTAAAACCA             CCGCAGC TCCA GCACCGG              GTTAATGGTGCGCCC  43 31
CTM43_RS25705 NONE
CTM43_RS25700 NONE
CTM43_RS25695 5232450 .. 5232465 - -11.8  -5.86976   GCAGAAAACAAAAAA              CCCCGC CGAA GCGGGG               TTCAAAATTGGTCGG 100 34
CTM43_RS25670 5224976 .. 5224986 -  -2.4   -2.7186   AAATTCCGTTAATGA                 CGTG TTT CCCG                 GATAGCGGCGCATCG  39 60
CTM43_RS25660 NONE
CTM43_RS25655 NONE
CTM43_RS25650 NONE
        xerC NONE
        yigB 5221079 .. 5221095 - -12.3  -3.65991   ACCGCCGGAAGAGAA              GGGGTTC CAC GAACCCC              TGTTAATATATACAG  88 53
CTM43_RS25635 NONE
CTM43_RS25630 5218661 .. 5218698 -  -7.7  -3.29144   GCAGGTCGCTGACAA   CCGCTAAGGCTATCAGC ATAA GAGGATAGCCTTAGGAG    TTGTTCCTGAATGAC  64 111
        corA 5217570 .. 5217585 - -10.4    -4.015   TCAGCCAGTAAAGAA              GGGAGC CGAC GCTCCC               TTTTTTTACAGCCAG  85 31
CTM43_RS25610 5215088 .. 5215109 - -12.3  -5.07652   TGCCTGAAAAGAAAA           CAGGCGCTA TTTT CAGCGCCTG            CGAGCCAGAGTGCAA 100 44
        recQ NONE
        rhtC 5212394 .. 5212408 -   -10  -3.93619   ATAAAAGAAGGGAAA               CACCAG GCT CTGGTG               CAGGTTGCCGAAGCG  77 169
CTM43_RS25585 NONE
        yigL 5208763 .. 5208776 -  -3.1  -2.57274   GGTGATAATTAACAG               CG-CCA CAA TGGTCG               TCTCGTTGGATAAAG  40 106
CTM43_RS25575 5207791 .. 5207803 -  -4.8  -4.25104   TGGTGGTCACCAAAA                CCCT GGGTG AGGG                ATTATGGAGCCGGTT  64 91
CTM43_RS25565 5204478 .. 5204493 - -10.4   -5.2189   CTAAGCATGAAAAAA              GGAGGC AAAT GCCTCC               TTTTTGATTTTTCGC 100 48
CTM43_RS25555 5202571 .. 5202595 -  -9.9  -5.09225   AGGCGACGCAAAAAA          GAAAGGCCGGA GGA TCCGGCCTGAC          AGGGAAAGTGTTGAG 100 41
        rmuC 5200987 .. 5201013 -  -4.4  -2.62244   CTTTTCAAGAAAATG         TTCACTGAGTGT ATC AGACTCAGCGCA         TTTCCCATACGTTTC  44 39
CTM43_RS25545 NONE
CTM43_RS25540 NONE
CTM43_RS25535 NONE
        tatA NONE
        tatB NONE
        tatC NONE
        tatD 5195411 .. 5195427 -  -2.9  -3.96705   TCCAGAAAATCTAAA              CGCCG TTAATGT CGACG              CCAAACAGCGCCCTG  56 4
CTM43_RS25505 5193251 .. 5193266 -    -6    -3.816   CAATAGAGCAAAACA              GCGGCG TTAG CCCCGC               TTACTGTTGTTTAAA  64 26
CTM43_RS25500 5192417 .. 5192468 -  -8.6  -2.84878   GGGTTTAAGCGAAAG GGTATCTCAACGCCATTGCCACCAG AAC CTGGCGGCTATGGCGAAGAGAG-CA GGTTTAGTTGCCGTT  62 73
CTM43_RS25480 NONE
CTM43_RS25475 NONE
        trkH NONE
CTM43_RS25465 5184632 .. 5184657 -  -5.9  -2.85069   AATTGTTAAAGAGCA         GTGCCGCTTCG TTTT CGCTGCGGCGC          GGGGTGTGCATATTA  52 243
CTM43_RS25460 5182914 .. 5182927 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGGCAGGTTCTT  39 36
CTM43_RS25455 5182787 .. 5182799 -  -6.3  -3.55622   TGCAACCTCTTCAAA                TTTGC TTC GCAAA                TTTGGTAGGCCTGAG  61 28
CTM43_RS25450 5182633 .. 5182666 -  -6.7  -4.49756   TTTTAAAGAGCAAAA     CTTCGCAGTGCACCT TTTC AGGTTCACTCTGAAG      TTTTCTTGTGTTCGC  77 49
CTM43_RS25445 5179587 .. 5179607 -  -3.9  -2.73903   AAAATTCTCTCAAAT            CCGCCAAAA CAT CTTCGGCGT            TGTAAGGTTAAGCCT  44 17
         rrf 5179247 .. 5179296 - -24.7  -4.09117   CTCACCGACAAACAA CAGATAAAACAAAAAGCCCGGTC TTTC GACCGGGCTTTTTGCTTTATTTG ATGCCTGGCAGTTCC 100 28
CTM43_RS25435 NONE
        birA 5176874 .. 5176889 - -10.4   -4.5493   ACGTAAATAAAATAA              GGGAGC CGAA GCTCCC               TTTTTTATTCTGCAC 100 30
CTM43_RS25420 NONE
CTM43_RS25415 5175240 .. 5175261 - -10.3  -3.01712   GTTCTTTCTGTAATA           CTAAAGAGA CTGC TCTCTTTAG            TATTGAGCTGATTAG  72 83
CTM43_RS25410 NONE
CTM43_RS25405 5174981 .. 5174997 -  -6.5   -3.3071   ATATCACCACATCAA              CCAGGCA ACA TGCCCGA              CTTGTTGAATGAACA  59 76
         tuf 5173737 .. 5173759 -  -4.1  -2.72511   CGCATTGCGTCAAAT           GTTATCAGC GATTA GCCGAGAAC           TTTAGCAACCACGCC  44 14
CTM43_RS25395 5173474 .. 5173490 -  -6.6  -3.65902   GCGAGGCGATCCAAA              CCGAAA TTAAG TTTCGG              ATTATACACTTAACT  63 39
        secE NONE
        nusG 5172413 .. 5172441 - -13.2  -5.35224   CCCATAAAAACAAAA        GGCGCGGAATTG TATGC CAATTTCGCGCC        CTATGCAACGATTAA 100 65
        rplK NONE
CTM43_RS25375 5171143 .. 5171179 -  -6.6   -2.7094   TCTTATTGACAGAAT   CGTGGG-GGTAAGATTG TAGA CAAAATCACCGCCCACG    TAAAGGCATTAGTTT  53 34
CTM43_RS25370 5170271 .. 5170284 -  -3.8  -3.89695   GCTTTACAAAGATAA               CTGC GATTAA GCAG                CTTCTTTCGCATCGC  57 18
CTM43_RS25365 5169781 .. 5169806 - -15.5  -4.64766   CTTACAGCGCAAAAA         GGCTGGTGACC AAAA AGTCACCAGCC          TCAGCCTGATTTCTC 100 64
        rpoB 5165443 .. 5165474 -   -10  -2.80816   GTCGGAGTTAGCACA      TTCCGCTGCCGGGC GTTA ACCCGGCAGCAGTG       ACCTGTTTGAGCGAG  68 43
        rpoC 5161148 .. 5161170 - -19.2   -5.9218   TAGACAATAAAAAAA           GCCGGTCAGG AAA CCTGACCGGC           TTTTTAGCAGTGCAT 100 47
CTM43_RS25350 5159423 .. 5159444 - -12.9  -3.07935   ATCTCACGGATTTAA           CGGGCGTCG CTGC CGGCGCCCG            TCCTTCTTACAGAAA  83 32
CTM43_RS25295 NONE
CTM43_RS25290 NONE
CTM43_RS25285 NONE
CTM43_RS25280 NONE
CTM43_RS25275 NONE
CTM43_RS25270 5145926 .. 5145942 -  -7.9  -3.58522   ATTACTATGCGCAAA              CCAGCGC CCT GCGCCAG              CAGCTGCAGTCCAAA  62 263
        zraS NONE
        zraR 5142449 .. 5142459 -  -2.4   -4.4648   AGCTGGACGAGAAAA                 CCTC CGA GTGG                 GATGACCGCGCGTCG  64 333
CTM43_RS25240 NONE
CTM43_RS25235 5137478 .. 5137513 -    -7  -4.00532   TTTTTAAAGAGCAAA    TATCTCAAACATCACC CGAA GATGAGTTTTGAGATA     GTTCGGCACGCGTCT  71 61
CTM43_RS25230 5134442 .. 5134460 -  -7.4  -2.73903   AAAATTCTCTCAAAT             CGCCAAAA CAT CTTCGGCG             TTGTAAGGTTAAGCC  56 18
         rrf 5134210 .. 5134241 - -19.6  -4.81249   TTTTAAACGCAAAAA      CAAAAAGCCCGGTC TTTC GACCGGGCTTTCTG       CTTTATTTGATGCCT 100 37
CTM43_RS25215 5132450 .. 5132465 - -10.4  -5.63517   TTCGGAAATAAAAAA              GGCACC CGAA GGTGCC               AGAGGCAAAATGCTG 100 71
CTM43_RS25210 5130626 .. 5130640 -  -3.5  -3.84514   AGGTGAAGGACTAAA               TGGCG AACCA CACCA               TCTGGCGATTAGGCC  55 34
        aceA NONE
CTM43_RS25200 5127333 .. 5127347 - -11.4  -5.63517   GGGTTAAATAAAAAA               TGCCCC AGA GGGGCA               TTTTAAGTAGGCCTG 100 56
CTM43_RS25190 5122570 .. 5122600 - -12.6  -4.20918   GTTAACCTCAATAAA       GAGACAAGGCGCTC ACA GAGCGCCTTGTTTG       TTGTAAGGAAAGATG 100 45
CTM43_RS25185 5120767 .. 5120821 - -10.5  -3.28712   CGGCGTTTGCCAGAA GCTAGGATGTCCCTCCCGGGAAGGCG TCAG CCACGTCCCGGGAGGG-CTACCTCGC CAGAAAAGAAGCGAC  75 63
        rluF 5112797 .. 5112811 -  -3.4  -4.27584   AGCGCGAATTGAAAA               CGCTGC TTG ACCGCG               CGCGTATTGCGCATG  64 219
CTM43_RS25110 5107746 .. 5107765 - -13.6  -5.38054   GGCTATAAATAAAAA            TGCCGACC AAAG GGTCGGCA             TTCCGTCTTAGCTGC 100 48
        psiE 5102546 .. 5102571 -  -3.8  -3.61398   GGCTCGCTGGAAGAA         GCGGCGGCGC TGGATG GCGCGACCCC          ATGGCAGGCTTTCCG  51 512
CTM43_RS25055 5098761 .. 5098773 -  -4.1  -2.57132   TCCCTTCGTTACAAC                CTGTC ACT AACAG                TCACATTCAAGATGG  44 46
        malK NONE
CTM43_RS25045 5096209 .. 5096228 -   -15  -2.93817   AACCCTGAATAATCA            GGAGGGGC TGAC GCCCCTCC             CAGGTTACACCCGTC  91 53
        malM 5095157 .. 5095178 - -14.5  -5.40072   GCGCGTGCAAAAAAA           GGTGCATCC CGGA GGATGCACC            TAAAGGCTGTGCCTA 100 65
CTM43_RS25035 5094542 .. 5094552 -  -2.4  -3.40403   TTCCTCTTAGTACAA                 CGGC GAC GCAG                 GCAAAAAAAGCTCGG  45 6
CTM43_RS25030 5093490 .. 5093513 -    -3  -2.64973   ATGAAGGCTATATCA          GCGACACCGGC GAC GCCGA-GCCGG          AAGAGACCCTGAAGG  40 166
CTM43_RS25020 NONE
        lexA 5089910 .. 5089944 -  -7.8   -4.7497   CTGATTGAGGAAAAA     CGTCGCAGCGTCAC GCAACAG ATGACGCTGCGCAG     AGGCAGGCGCTACAG  85 35
        dinF 5088442 .. 5088452 -  -2.4  -2.73542   CGGAATTTTTAACCA                 TCGC ACC GCGG                 GATAACGCGAAGAGG  39 141
CTM43_RS25005 5088020 .. 5088046 -  -6.5  -4.87389   CAGCTCAAAAAGAAA        GCCCGCTG-AGC GGCT GCCGCAGCGGGA         AAAAGGGTTAACGGC  83 103
CTM43_RS24995 5086735 .. 5086749 - -11.4  -2.93326   TAAAGATACACCACA               GGCGCA TAG TGCGCC               GCGCTTCGCCCCTCA  78 51
        dusA 5085622 .. 5085645 - -13.1  -5.09259   GACTTTAAAACAAAA          CGCCCCGCG TCAGTG CGCGAGGCG           TGGTCAATTTCACCA 100 56
        pspG 5085131 .. 5085160 -  -7.2   -4.1585   GCAGAAGGGGCAAAA       GTTTAGGGCTTCC ACCTG GGAAGCCCTT-AC       TTTTTTTTAGTTCGG  73 159
        dnaB NONE
         alr 5081345 .. 5081355 -  -8.2  -2.65354   TTGAGGGGAAAGTGA                 CCGC GCA GCGG                 TATAAACCGCTTTTT  61 102
CTM43_RS24965 5080006 .. 5080054 -   -11  -2.84459   AAGAGGATGATCACA TCCGAGGGGGTTGCCCCTGCCCG TTGA CCGGCAGAGACAACCTGCT-GGA GAGCGGCTTACATTA  74 33
CTM43_RS24960 5079117 .. 5079136 -   -15  -5.60993   TTTTGCATAAAAAAA            CGGCAGCG CCGT CGCTGCCG             TTTATCGCGTTCAGG 100 47
CTM43_RS24955 NONE
CTM43_RS24950 5077740 .. 5077752 -  -4.7  -3.39936   AGGCAAACGCTATAA                CCGCG AAA CGCTG                GAGATTAAGTACAAG  51 524
CTM43_RS24935 5074588 .. 5074606 - -13.8  -5.52807   AATAACAAAGAAAAA             GCCCCGGC GAA ACCGGGGC             TTTCTGTTTTCGACT 100 68
CTM43_RS24925 5070058 .. 5070077 -   -10  -5.95539   TCTGAAATAAAAAAA            CCGGGTCGC GCT GC-ACCCGG            TTTACTCCTCATCAG 100 46
        bamA NONE
CTM43_RS24900 NONE
        iraM 5063680 .. 5063715 - -15.5  -2.90496   CTGCTGGCGAAATGA    CGTC-ACGCCGCCGGT GTCTG ACCGGCGGCGTGGACT    GGCTAACGCCAGGGT  95 28
CTM43_RS24875 NONE
CTM43_RS24870 5058730 .. 5058752 - -10.4  -2.68072   GTCAGCACAAGCAAG           CGCCCGGGAC GGC GGCCCGGGCT           GGAAAAAGGTTTAAT  69 36
CTM43_RS24865 NONE
CTM43_RS24860 5056978 .. 5056994 - -12.3  -4.62336   ACCTGAGGTTAAAAA              GCTTCCC GAC GGGAAGC              TTTTTCGTTTTCTGC 100 46
CTM43_RS24850 5056237 .. 5056248 -  -5.8  -3.18735   CGAACACGTTAGCAA                TCGC GATT GCGA                 TAGACATCAGCTGAC  55 130
CTM43_RS24845 5054581 .. 5054599 -  -5.8  -2.79302   ACTATCGCCATCAGA             TCTCCGCG TGA CGCGGCGG             CTGAGGCACGTTCGC  52 2
        soxR 5053687 .. 5053713 - -12.4   -4.2142   AAGACCGGAAAACAA         CTAAAGCGCC CAGTTGT GGCGCTTTAG         TTTTATCACTCGTCT  95 31
CTM43_RS24830 5052491 .. 5052513 -  -7.6  -3.07816   TCTCCATGTACCGAA           TCGCAGCGCC AGG GGGGCCGCAA           AAAAGCAAACGTTTA  60 303
CTM43_RS24825 5051016 .. 5051035 - -16.4  -5.26119   GGCTTAAAAATAAAA            CGGGCGGC CTGA GCCGCCCG             TGAGGAGCACGAAGG 100 43
CTM43_RS24820 5049128 .. 5049172 -   -12  -3.17075   CGTTCCGCAAGGGAA GGGGTAGCCCGGGTCAGGCGC TTGC GCCGCTG-CCCGGGTTTCCCC CGGTCGCGCTAACGC  82 112
CTM43_RS24810 NONE
CTM43_RS24805 5046953 .. 5046980 -  -4.2  -5.31855   CATCAATAACAAAAA        CAG-GGAATAGCC GAT AGCTATTCCTCTC        CTCAATATTTATTAA  80 61
CTM43_RS24800 5045901 .. 5045922 -  -8.7  -3.17901   ATATGTTTAATTTAA           GGGGAATAG CAGG CGATTCCCC            TTTCTCCATTCAACA  64 51
CTM43_RS24795 NONE
CTM43_RS24790 5042587 .. 5042603 -  -3.5  -4.33274   GGGAGAGCAGCAAAA              TGGCCAC CAG GAGGCCC              CTTGTGCTGCCGTCT  63 87
CTM43_RS24785 NONE
CTM43_RS24780 5040883 .. 5040904 -  -5.7  -3.86346   TTATCCGTTCACAAA           CCGGGATCG GTAT CGAACGCGG            CCAGGCGCATTAATC  64 85
CTM43_RS24765 5038436 .. 5038450 -    -7  -4.65895   TGTCGCACCCAAAAA               TCGCCG AAG CGGCGG               TGGTGGGGATCCCGC  79 361
CTM43_RS24755 5036420 .. 5036446 -  -2.9  -3.90291   ACTTCCTCAATGAAA         GGCACCATTCC TTTTC GTCATGGTACC         CACTGCAGGGGGTAT  54 90
        gltP 5035056 .. 5035077 - -18.7  -5.25772   AAAGGATAAGAAAAA           GCCCGGCGC TATC GCGCCGGGC            TTTGTGTTTTATTGG 100 34
CTM43_RS24735 5030731 .. 5030751 - -11.1  -3.26841   CAAATAAAGTCAACA            GCGGGTTGG CAG CAAACCCGC            CCTACGCCGCCTTCT  76 27
CTM43_RS24730 NONE
CTM43_RS24725 5028818 .. 5028830 -  -3.3  -4.08767   TCGACGGCGCCAAAA                CGCTC CCT GAGCT                ACAGGCGTTTATTCA  58 181
CTM43_RS24700 NONE
CTM43_RS24695 5021370 .. 5021385 -  -6.1  -3.41073   GACGGGATGGAAATA              GCGCT GGATTA AGCGC               TGGCCTGCGGGGGGC  57 43
        proP 5010457 .. 5010482 - -16.9  -5.31456   CGAAGGCATAAAAAA         TGCCGCC-GGGG TTT CCCCAGGCGGCA         TGATTAACAGTGAAA 100 45
CTM43_RS24615 5009301 .. 5009313 -  -3.4  -3.07113   CATCAGGTCATTGAA                CACT TGCAG AGTG                GCACGCCGCTCCCCG  45 5
CTM43_RS24610 NONE
        melB 5006370 .. 5006382 -  -5.5  -4.56597   TTTTTTGCTCAAAAA                GAGAG CAT CCCTC                CCCTCTTTCGTCAGC  73 57
CTM43_RS24600 NONE
CTM43_RS24595 5004473 .. 5004489 -  -5.8  -3.40403   CCTGCTGGATGAGAA             CGCGCGG CTGA CC-CGCG              AAAATCGCCTGCTGC  53 313
CTM43_RS24570 5001438 .. 5001454 - -15.1  -3.29947   GACGCATGAGAGCAA              GGCCGCC GTC GGCGGCC              TGGACAGGTAATACG 100 48
CTM43_RS24545 4993709 .. 4993748 - -12.3  -2.78596   GATGCTTTCACGATA  TCTCATGGTATTCCGAC GCGTGA GTCGGAATACCATGGTA   GTGTTAATTTATGAC  80 267
CTM43_RS24540 NONE
CTM43_RS24535 4991645 .. 4991661 - -11.5  -3.97674   CCACTATTTAAAGAA              CCCGCCC AAA AGGCGGG              TTTTTGCTTTTCTGC  91 247
CTM43_RS24495 4983283 .. 4983304 - -17.3  -3.14132   CGTCTCCTTCATCAA           CGGGCGCTG CGTT CAGCGCCCG            TAATCATCAATTTGC 100 140
        fxsA 4982750 .. 4982780 - -14.7  -4.41616   AGGCCTGCAAAGAAA      GCGGCCCGGTC-GC ATCT GCTGACCGGGCCGG       GGGGATGTTAATCGC 100 33
CTM43_RS24480 NONE
CTM43_RS24475 4979221 .. 4979244 - -12.4  -5.45802   GCGCCAAAAGAAAAA          CCCCCAGCCA TTGC TGGCCAGGGG           TTTCTGCTTTTTTAT 100 57
CTM43_RS24470 4978622 .. 4978657 -   -14  -2.75183   ATCCTCATCTAACGA    CCACGCCTCTCTCTGC GCTC GCGGAGAGAGGCGTCA     CGCATCAGTTCGGGC  88 30
CTM43_RS24420 4967040 .. 4967075 - -17.7   -4.1711   AGCAGCGTTAATAAA    CTGAAGGTCTGCCAG GACGTT CTGGCAGACCTTCGG     ATAGGAAGATTTCGA 100 107
         efp 4965355 .. 4965384 - -11.4  -4.25104   GTGCCTGTACGAAAA       GAGCGGCGCAGC ACGGAG GCTACGCCGGTC        ATCATGACGCGAAAT  91 40
CTM43_RS24405 4965081 .. 4965091 -  -3.2  -2.96274   TGCCCTATAAGCATA                 GACA AAC CGTC                 CAAAGATGAAGGGAT  45 128
CTM43_RS24400 4964855 .. 4964877 - -11.3  -3.76837   GAGAGAAGTGAAGAA           CGGTACGGC GCTAA ACCGTACCG           TTGACGGCGTTTATT  81 36
        sugE 4964136 .. 4964170 -    -4  -3.42197   GAATAAAGGTTATAA     CCCCGACCGCGGCATG TGG CAGAAAACGGACGGGG     TAGCGTACTTTACCG  49 282
CTM43_RS24365 4959068 .. 4959085 -  -7.7  -3.70478   ATAAATCTATCCAAA             CGT-GGGC ATC GCCCGACG             AGCGACGCCTGGCCT  68 177
        yjeM 4957486 .. 4957504 - -12.4  -4.56597   CCTCGGCCGGAAAAA             CCAGCCGC CGT ACGGCTGG             TAGCCTGTAAACCAT 100 73
CTM43_RS24340 NONE
CTM43_RS24335 4951070 .. 4951106 - -14.3  -3.91488   AAGCCGGGCAAATAA    CCGGCGTCATGGGCGAC TTC GCCACCCTCGACGCCTG    GCAGCAGGAGAACCC 100 256
CTM43_RS24325 NONE
CTM43_RS24320 4950162 .. 4950175 -  -2.4  -3.83205   ATCTGCGAGATGAAA               TCCT TTGATC AGGA                TGGTGCTTTCAAATT  52 42
CTM43_RS24315 4949994 .. 4950006 -  -3.4  -3.06302   ATCATCGTCATTCAA                GCTA CCGTC TAGC                AACCTGAAAACTGCG  45 67
CTM43_RS24310 4949848 .. 4949879 -  -2.9  -4.58773   CGGACCAAACGAAAA      TCATCCCCGGCGC TGGATT GCACTGTGGATAA       ATAAGAGATGGAAGA  65 46
CTM43_RS24300 NONE
        tsaE NONE
        amiB NONE
CTM43_RS24285 NONE
        miaA NONE
CTM43_RS24275 4941891 .. 4941903 -  -4.7   -4.4715   GGGGAACGCAGAAAA                CCTGG CTC CCCGG                CGTGGAAAAACAGCA  67 47
        hflX NONE
        hflK NONE
        hflC 4938177 .. 4938195 -   -16   -5.1861   CGCAGCATGAAAAAA             GGCGCCTG TTT CAGGCGCC             TTTTCGCATTATTAC 100 64
CTM43_RS24250 4937426 .. 4937444 -  -3.1  -2.94545   CAAAATAAGGCAAAT             CCGACCA CTTTT TGATCAG             CCAATCGATTTCCTC  43 22
CTM43_RS24245 4936007 .. 4936032 - -11.2  -4.87626   GGCGAACAGCAAAAA         CAA-GGGCGCC CGAAC GGCGCCCCTTG         AGAGTGATTACGCGT 100 33
CTM43_RS24240 NONE
CTM43_RS24235 4932973 .. 4932985 -  -6.3  -2.78384   TCCTGCGTCAGCAGA                CTTCA GGG TGAAG                GGAGGTCAATCACTC  54 35
        rlmB 4932139 .. 4932156 - -11.3  -5.24531   AGCGGTCACAAAAAA             GCCATCC CGGA GGATGGC              TTTTTTGATTCGTCG 100 51
CTM43_RS24225 4930081 .. 4930112 - -11.6  -3.28712   TTCTCCTGTGCATAA      TAACGTTCGGCCAG CCAC CTGGCAGGACGTTA       GCAACGGACTGCCCT  82 333
CTM43_RS24210 4928726 .. 4928770 - -16.5  -2.61873   ATCACCGGCAAACAG GCCGATGCCGCGATCCTCAAA CAG CTTGAGGATCAGGGCGTCAGC GTAATCCGCGTTTAA 100 37
CTM43_RS24195 NONE
CTM43_RS24190 NONE
CTM43_RS24185 4924305 .. 4924318 -  -3.1  -3.53091   AGTGTTCCTTTTAAA               CAGCCG CCG CGG-TG               GCGTTTTTGATTAAA  49 7
CTM43_RS24180 NONE
CTM43_RS24175 NONE
CTM43_RS24170 NONE
CTM43_RS24155 NONE
        priB NONE
        rpsR 4919103 .. 4919113 -  -2.4  -2.50307   CAAAGTCGTATTAAT                 GGAC CGT GACC                 GATTACTGATGACGA  39 28
CTM43_RS24140 4918576 .. 4918594 - -13.1  -4.77757   CGCTAAAAAGCAAAA             CGCCGGC ACAAG GCCGGCG             GTTTGTTGTTACCAG 100 56
CTM43_RS24130 4916849 .. 4916866 -  -5.6  -2.74263   ATTTTATGTTTAAAG             TGAGTG TTATAT CACTCA              TCTAACGCGAAATAG  48 162
CTM43_RS24125 4915198 .. 4915213 - -11.8  -5.41941   GAAAGTAAAGAAAAA              GGCGCC CGCG GGCGCC               CTCGACATTGTCCGT 100 107
CTM43_RS24100 4911058 .. 4911075 -  -5.5  -4.36903   TTTATCAAAGAGAAA             GCGCAGT ATCC AATGCGC              CAGGTGGCCACCGAT  69 137
        cysQ 4907859 .. 4907874 -  -2.5  -4.87665   GTTTAGCTATAAAAA              CTGGA ATAGCG CCCAG               CTGGCGGGAAAAGTG  74 405
CTM43_RS24080 4907125 .. 4907143 -   -16  -3.60925   GGCTAAAAACATCAA             CGGCTCCC ATC GGGAGCCG             TCTTTTACCTACTAC 100 59
CTM43_RS24050 4898661 .. 4898671 -  -4.6  -2.62316   TAAACTCATAATTCA                 GGCC CCA GACC                 GATGTAAAACTGTAA  46 5
CTM43_RS24045 NONE
CTM43_RS24040 4894501 .. 4894524 - -14.6   -5.5604   TGAAGTAATAAAAAA          CAACGCCACC CGAA GGTGGCGCTG           TCGTGGTTAATACTG 100 32
CTM43_RS24020 4890004 .. 4890021 -  -6.3  -3.09015   GGGAGAGGGATGGAA             TGAG-GGG CTC CCCACTCA             GTAGCCCATATTTTT  55 23
CTM43_RS24015 NONE
CTM43_RS24010 NONE
        yjfF 4885967 .. 4885983 -  -6.5    -3.889   GGCAACTACATCAAA              TTCCCGC AGG GCGTGAA              GAAGTACATTAAGTA  64 414
         mpl 4883742 .. 4883762 - -12.6  -5.10933   GTAGCTAAAACAAAA            CTGCCCTC ACGCG GAGGGCAG            TGACCGGAGGCGTAC 100 45
CTM43_RS23990 4883081 .. 4883099 -  -4.4  -4.46212   CCGTTGAGCAGAAAA             TCGCGCAG ATT CAGGGCGA             TAACAAAGTCGCGGA  70 112
        pmbA NONE
        cybC 4878618 .. 4878633 -    -4  -2.64987   AAACAGGCGATATGA              CGTGAT GCGC ATCACA               ACAATGAGCGAGGTT  44 146
CTM43_RS23965 NONE
CTM43_RS23960 NONE
CTM43_RS23955 4877454 .. 4877472 -    -3  -2.93073   TTTTGCTAACAATCA             GGTTTGCG TGA CGAAATCC             ACTTTATCGAGATCG  43 4
CTM43_RS23950 NONE
CTM43_RS23945 4875976 .. 4875999 -    -8  -3.30124   TTGTAGGCCCGATAA          GCGCAGCGCC ATCG GGCGCTTAGC           TAATCGCCACCGGGA  64 21
CTM43_RS23940 NONE
CTM43_RS23935 NONE
CTM43_RS23930 4872881 .. 4872911 - -12.6  -2.58544   GTTCAGTGGGATAAG       CTGCTCCTCACCCT TTG AGGGTGAGGGACAA       GGGCACTACTTAACT  81 31
CTM43_RS23925 NONE
CTM43_RS23920 NONE
CTM43_RS23915 4868961 .. 4868971 -  -6.8  -3.63627   CGCGGATATTTTAAA                 GCTG GTT CAGC                 GCGTACGCGCCGAAT  63 497
CTM43_RS23895 4865361 .. 4865403 -   -14  -2.60813   GATCTGCGTAAACAG CTGGCGCAGGCCAGCGAACG GCG CGCCAGCTGGCTTACGCCGG ACAGCGCCGCCCTGC  74 478
CTM43_RS23885 4864527 .. 4864537 -  -8.2  -2.98823   TTTTCGGCATACAGA                 GCGC CGC GCGC                 GATCGCCAGGACCGC  63 73
CTM43_RS23880 NONE
        celB 4861297 .. 4861319 - -14.2  -3.16055   CAAAGCCCGGACGAA           CTGCTGGCGA TCC TCGCCAGCAA           GTCGCGCGACAACAG  83 514
CTM43_RS23855 4857228 .. 4857244 -  -2.9  -4.25283   ACGGGCGTAGCAAAA              CCTACCT GTC AGGCATG              TTATTTTTATGGCAG  59 96
        mgtA 4854412 .. 4854428 - -13.7  -5.14563   GTCGGCATGAAAAAA              GGCAGCC AGT GGCTGCC              TTTTTTACGTGGTTC 100 58
CTM43_RS23820 4851594 .. 4851629 -  -9.3  -4.91852   GCCAGGAAAAACAAA    GAA-TAGCAATTGTCA CAATT TGACAATTGCTAGCTC    TGGGTAAAAAAAGCT 100 47
CTM43_RS23815 NONE
CTM43_RS23810 4849527 .. 4849563 -  -3.6  -3.23009   GAAAAAGCGCAGGAA    TCCCCCTTTCCGCCCG GCTAG CGGACGGAAATCAGTA    CGGAAAAATGAGAGA  46 53
CTM43_RS23805 NONE
        yfcC 4846421 .. 4846448 -  -7.7   -3.2534   AGGATTATAATCGAA        GCGCGCACATCA AACTA CGACG-GCGCGC        ATATCCTTCAGACCC  62 33
CTM43_RS23795 4845260 .. 4845286 -  -3.6  -3.53091   ACCGCGCTGGCCAAA         CAGCAGGGCG GCAACAT CACCCTGACG         GAAGATATCGCCGCA  51 385
        rraB NONE
CTM43_RS23780 4842845 .. 4842871 -  -8.6  -3.57144   GCTGCTATCTGGAAA         CCACCGCCTTCC TGA GGGAGGCGATCG         GCTTATATGAACATC  66 384
        lptF 4835917 .. 4835929 -  -9.1  -2.78015   TCAAGTACGCCAAAC                GCCTG CAT CAGGC                CGCTCCTTTATTAAA  65 20
        lptG 4834800 .. 4834821 - -15.9  -5.77853   AAGCGCTAAAAAAAA           GCCCCCTCA TCGC TGAGGGGGC            TTACGTTTCAGGCTT 100 46
        mmsA NONE
        iolB 4829633 .. 4829663 - -24.2  -3.90744   GCCGCCCTCAAACAA       GAAGGCCGGTTAGC ATC GCTAACCGGCCTTC       TTTATCCGCTTCTGC 100 49
CTM43_RS23715 4828456 .. 4828488 -  -9.7  -3.86897   GCCATCCGGCACAAA      GGCGGGAATGGCACC GGT GGTGTCCTCCCCGGC      GGCGCTGCGCTTGCC  79 134
        iolD 4822885 .. 4822898 -  -9.5  -2.77899   TCGTTTTAGTAATCA               CGCGC CTGG GCGCG                CTTTTCATTAATCAT  68 2
CTM43_RS23695 NONE
CTM43_RS23690 NONE
        iolE 4819927 .. 4819951 - -12.9  -5.65513   GAGGAAGGAAAAAAA          GCAGGCCATAC CCG GTATGGCCTGA          AAATGTCACAACGAT 100 40
CTM43_RS23635 4810687 .. 4810702 -    -9  -5.64274   TCAGGCACAAAAAAA              GACGTC CGTT GACGTC               TATTGATGTTCCGAT 100 40
CTM43_RS23630 4809184 .. 4809207 - -13.8  -4.68724   TGAGTTAAGACAAAA          GCCTCTCCCC ATTC GGGGGGAGGC           TTCTCAGCTATAAAT 100 83
CTM43_RS23560 4787700 .. 4787717 - -11.3  -3.21925   ATATGTTAGTACCAA             GTGCGGT GATC ACCGCAC              TTTCGGTATCACTGG  71 124
CTM43_RS23515 4778624 .. 4778640 -  -8.1  -2.90496   CGTGGCCTCAAATGA              CCATAAA GCT TTTATGG              CTGATCTGAAACCGG  59 402
CTM43_RS23505 4777399 .. 4777413 -  -2.1  -4.62069   TCTGCACTGTAAAAA              CAGTCC GGAC GG-CTG               GCTGTGCCCGATAGA  66 340
CTM43_RS23455 NONE
CTM43_RS23450 4764426 .. 4764448 -  -7.6  -3.82946   GTACCTGAAAGATAA           CGCCATCAAG GTG CCGGACGGCG           TGGAATACGTCTGGT  68 506
        xylA 4759797 .. 4759816 - -13.6   -3.0395   ATAGACGGCGGAATA            CATGCCCC CGCA GGGGCATG             TCAGCAAAAATTAAC  86 36
CTM43_RS23430 4757807 .. 4757820 -  -9.5  -3.07043   GCGACCAGCTGAACA               GCCGC CAGC GCGGC                GAGCTGCGGGAGGTG  64 378
CTM43_RS23375 4749314 .. 4749341 -    -4  -3.53012   CTGGCGGCGCGCAAA        GCCTGG-CGCCGG GTG CCGGAAACCACGC        TGCTGGTGCTGGGCC  51 208
CTM43_RS23340 NONE
CTM43_RS23335 NONE
CTM43_RS23330 NONE
CTM43_RS23325 4739491 .. 4739511 -  -6.1  -3.70773   GTGCATAGCGAACAA            CTCGACACC ACC GATGCCGAA            GCGCTGGATGCGCTG  61 202
CTM43_RS23315 NONE
CTM43_RS23310 4736156 .. 4736191 -    -7  -4.00532   TTTTTAAAGAGCAAA    TATCTCAAACGTCACC CGAA GATGAGTTTTGAGATA     CATCGGCACGCGTCT  71 61
CTM43_RS23305 4733119 .. 4733139 -  -3.9  -2.73903   AAAATCTTCTCAAAT            CCGCCAAAA CAT CTTCGGCGT            TGTAAGGTTAAGCCT  44 17
         rrf 4732890 .. 4732909 - -13.6  -4.85433   ACAGAAACGCAAAAA            GCCCATCC GGCA GGATGGGC             TCTTCACTTGTTTGA 100 42
CTM43_RS23295 4732457 .. 4732471 -  -5.8  -2.61126   ACAAACCAGATCAAG               TTAACA AAG TGTTAA               TGATAAAGCTCATTT  51 212
CTM43_RS23290 4731990 .. 4732010 -  -9.6  -2.79581   TAAAGGCTTAAGAAG            GGCCGTCG ACTTA CGGCGGCC            GAATGGTTTATTTAT  68 33
CTM43_RS23265 4724197 .. 4724220 -  -4.5  -2.63112   AAAGGTTCCATAGCA          TCCCCTGGCT GGTTA AGCC-GGGGC          GGCTGGCGCCCCGGA  46 48
CTM43_RS23260 NONE
CTM43_RS23255 NONE
CTM43_RS23250 4720357 .. 4720379 - -12.7  -2.78384   GCGTCGGCGAGCACA           GCGACCGCC ACTGG GGCGATCGC           TACGGGGAAGGCACT  73 437
CTM43_RS23240 NONE
        fosA 4718023 .. 4718065 -  -4.8  -3.13504   CCTTTACCAAAACCA TCGCCCCCGGGCTGCGTATC GGCTG GAT-CGCC-CCCGGGCGCTA CTACGACAAGCTGCT  47 524
CTM43_RS23225 4716674 .. 4716701 -   -12  -2.52795   AATTTCGTGAATGTA        TCCCGGCG-GCAC TTT GCGCTCACCGGGA        TAATGAAGAAGGTTT  78 62
CTM43_RS23220 NONE
CTM43_RS23215 NONE
CTM43_RS23210 4713636 .. 4713651 -    -9  -3.55444   CCCGGATGCTGGAAA              GCCATG TCGG CATGGC               GGTGACAACCCATCC  66 355
CTM43_RS23165 4706146 .. 4706184 -  -7.3  -2.84566   AATATTCCATAACGA  GGCTA-ACCGGGGCGACC GTCA GGCCGCCCCGGCGTTATC   AATGCGCCAGCGCGG  57 24
CTM43_RS23160 4704614 .. 4704629 - -10.4  -5.64274   TTAGCCATAAAAAAA              CCTGCC GAAT GGCAGG               TTTTTTTATGGCCGG 100 50
CTM43_RS23135 NONE
CTM43_RS23130 4698270 .. 4698316 - -10.3  -4.13945   AGTGGCAGTCTAAAA TCCGCGCCCAGGTTTACTTATC GCCC GATACGTAAACCTGG-CGCTTA ATATGCGTCATCTCA  85 51
        hpaR 4686796 .. 4686811 - -11.8  -3.53091   ACGCGCTGTTTGAAA              CCGCCG ACGG CGGCGG               CGTGGTTTACTGGCA  77 330
CTM43_RS23050 4685470 .. 4685486 -  -3.6  -3.45023   CGATGACGACTACAA              CGTGCT GGACG AGCTCG              ACACGCTGTTTTGAC  50 158
CTM43_RS23035 NONE
CTM43_RS23030 4682113 .. 4682134 -  -6.6  -3.38339   ATGAGTTAACAGGAA           CCATGCCT GAAAAA AGGCATAG            CGAACCCAGTGGCAC  59 128
CTM43_RS23025 NONE
CTM43_RS23020 NONE
CTM43_RS23015 4679045 .. 4679085 -   -14   -3.1505   ATTACGCCGTATTAA GCTGGCGCTCGACAGCCAC CGCG GCGGC-GTCGATCGGCAGC  CGCTGGGGGACTAAC  90 36
CTM43_RS23000 NONE
CTM43_RS22995 4673850 .. 4673870 -  -3.9  -2.55074   CTTAATTGCAACCGA            CGTGCCA GAAACAG TGGCGCG            TCGGCTAACGTAAGG  44 60
CTM43_RS22990 NONE
CTM43_RS22985 NONE
CTM43_RS22980 NONE
CTM43_RS22975 NONE
CTM43_RS22970 NONE
CTM43_RS22965 4669130 .. 4669163 - -16.1  -3.29043   AAGCGCCTCGGAGAA     TAGCATGGCGGCCAGC CCG GCTGGCCGCCAT-CAA     CACGACTTAGTAATC 100 32
CTM43_RS22960 4668055 .. 4668086 - -10.8  -3.19246   CGAAGGCTAACGCAA      TCCTGCCCGGCG-GA TTT TCGCGCCGGGCAGCG      GTTGTCGTGGCAGGA  76 43
CTM43_RS22925 NONE
        pobA 4660860 .. 4660870 -  -2.4  -2.52543   ACTCCTCTTAATTCA                 GGCG ACA CGCT                 CCATGGGCAAGCCCA  39 12
CTM43_RS22915 4659927 .. 4659943 -  -2.4  -4.25747   GAAAAGATAAAAACA              TTATTT AGCAA AAATAA              TTTCAGTACTGAACA  57 41
CTM43_RS22910 NONE
        bglJ 4658109 .. 4658124 -  -5.4  -2.90496   TTTGGCGCGAAAGCA              CGCATGC TAA GCA-GCG              ATGAAGTGGTTACCT  48 237
CTM43_RS22895 4656159 .. 4656186 - -13.4  -4.14739   CCACTTACCTGAAAA        GTAACGGGCGGC CTTT ACCGCCCGTTGC         TATTTATGCGGTCTG 100 29
CTM43_RS22880 4653331 .. 4653343 -    -2  -2.70932   CCTCCGTGGTAACGA                TACT TTCAG AGTA                TCGATGGTATGCGAA  39 377
CTM43_RS22855 NONE
CTM43_RS22850 NONE
CTM43_RS22845 4650460 .. 4650476 - -11.5  -3.90856   AATCTTCTAAGTAAA              CGCGGCC ATG GGCCACG              CATGTGGAATACGAA  88 80
        prfC 4648822 .. 4648839 - -14.1  -5.37345   CGTAACCAGAAAAAA             GCGCGGC CTGC GCCGCGC              TTCGTCAGGGATTAG 100 37
        osmY NONE
CTM43_RS22830 4647637 .. 4647655 - -14.6  -3.63968   GCTTAAACCGCGAAA             GCCAGTCC TCA GGACTGGC             TTTGTGTAAGATGAC  95 90
CTM43_RS22825 4646488 .. 4646499 -  -2.2  -2.54745   GGTATCGATAAAACG                GTGCG TCA CGC-C                AGATCCTCATGATCA  39 19
CTM43_RS22820 NONE
CTM43_RS22815 4644258 .. 4644279 -   -13  -3.20841   ACATTTACAGCAACA           CCAGCGGC ACGGTG GCCGCTGG            TTCAGGAGACAGGCT  84 40
CTM43_RS22810 4643010 .. 4643040 - -11.9  -2.57036   CAAAGAGAATAAATT      GCCGGATGACGGCG CGAG CGCCTT-ATCCGGC       CTACAGGCATCAATT  75 83
        deoA 4641625 .. 4641639 -    -5  -2.87132   CTTGTTCTCCATACA               TCTTGC GCT GCAAAA               AAGCGATCAGATCAG  47 48
        deoB 4640392 .. 4640406 -  -6.4  -3.35015   GCAATGACCTCAGAA               CATGGC TTT GCCATA               TTCCATGTCAGACGT  59 5
        deoD 4639492 .. 4639511 - -10.7  -5.60993   GCGCTGATAAAAAAA            GCCCGCT GCGCTT AGCGGGC             CTGGAAAACCGTAGG 100 78
CTM43_RS22775 NONE
        radA NONE
        nadR 4634015 .. 4634030 -    -9  -4.91084   AATAAAACGCAAAAA              GGCAAC GCAA GTTGCC               TTTTTTAATGTTTGC 100 93
CTM43_RS22755 4630097 .. 4630127 - -10.5  -2.78596   TATCGCGCCACCATA      TTGAGACGGGCAGC TTAC GCTGCCCGTCG-AA       TGTACTCTTCAACGA  71 69
CTM43_RS22750 4629402 .. 4629438 - -14.4  -3.76224   TCGGCAGCGAGGAAA   CGCGCGCTGGCG-CACG AAAT CGCGTCGCCAATGCGCG    CCTTGCCCGGCCAAA  95 340
        gpmB 4628432 .. 4628444 -  -4.7  -3.92592   ACCCTGAAGATGAAA                GCCGG GAT CAGGC                CACGCCGATTCAGTT  59 71
        creA NONE
        creB 4626211 .. 4626249 -  -5.9  -4.02119   GACGATAAGAAAATA  GCCCAGCAGCAGGCGCAT GCCG ATGCGCAT-CAGCCGCGC   CCCAGGCTGTAGCCC  66 16
        creC NONE
        creD 4623366 .. 4623384 - -17.4  -4.15565   GCCATGATGCGAAAA             CGGCGCCC CAG GGGCGCCG             TTTTTTATGCCGTCA 100 38
CTM43_RS22705 4622059 .. 4622069 -    -4  -4.06179   GTGAAAATTTACAAA                 TTTG CAA CAAA                 AATCACTAAAATTGC  60 338
CTM43_RS22700 4621289 .. 4621309 -  -2.5  -4.49311   CATAAATAAAAAATA            TGACAGAGT TTT ATTCTGGCA            TGTTTTTTTCAATAT  63 15
        thrL 4620972 .. 4620994 -   -12  -6.06723   CTTGTCAAAAAAAAA           GCCCGCAC TGTTCAG GTGCGGGC           TTTTTTCTGTGTTTC 100 44
CTM43_RS22690 4618481 .. 4618495 -  -2.8  -2.77043   TTGACCATCTTAAAC               TCCTAA CTT CCAGGA               CAGGGTGCGCAGCAG  42 5
CTM43_RS22685 NONE
CTM43_RS22680 4616206 .. 4616224 - -12.4  -5.19879   CGTTAAATATAAAAA             CCGGGCAA TAG CTGCCCGG             TTTGGTCGATCATGT 100 61
CTM43_RS22675 4615520 .. 4615534 -  -7.1  -5.46657   TACGGTAATAAAAAA               GGGGA GTCAT TCCCC               TTTTCAATATAATTA  93 59
         tal 4611826 .. 4611860 -  -7.1   -2.9914   GAGGCGGGACAGACA    GTGTAATGTGGCCGAC GGGC GTCGGCCAC-CTGCGC     GATTACAGCAGTTCG  59 28
CTM43_RS22650 NONE
CTM43_RS22645 4609650 .. 4609674 -  -9.9  -3.24032   AGTGCTGAACGAACA          GTTCGGCCGCA CCG TGCTGCCGATC          GGCGAACCGCGCTAA  70 103
        dnaK 4605487 .. 4605529 - -11.8  -3.02511   TTCAGCCCCTTAACA TGCGTGCACGGGCGGAGAGG AAA CCTCTTCGCCCGTGCCAGTG TTTTACCCGTTCAAA  78 47
        dnaJ 4604286 .. 4604308 - -13.4  -5.47399   CTAAGGCGAAAAAAA           GCCCGGGC AGCAAAG GCCCGGGC           CGGATATCAACAAAG 100 47
        nhaA 4602940 .. 4602972 - -10.6  -3.28712   TTCTCTCCCTGATAA      TGTCCAGGAGAGCC TGACG GGCTCTCCTGCAGA      AAGGTTATACCGCGA  75 30
        nhaR 4601937 .. 4601950 -  -9.5  -4.41616   ACTTTGTTAAAGAAA               CCCGC GAAA GCGGG                TTTTTTTATGCCTAC  85 101
CTM43_RS22595 NONE
CTM43_RS22590 NONE
CTM43_RS22585 4596973 .. 4597014 -  -2.9  -4.57073   TACGGGGGCCAAAAA TTCTGTAGGCCGGGTAAGCG TCA CG-TCACCCGGCATTGAGAT TTACGCCTGCTCTTT  65 26
CTM43_RS22580 NONE
CTM43_RS22575 4595450 .. 4595470 - -11.2  -5.40072   TTCTCCCTAAAAAAA            TGCCAGAC GTTAA GTCTGGCA            TCTTCTCATACTGCT 100 53
CTM43_RS22570 4594509 .. 4594520 -  -4.4  -2.74605   CTCCTTGAAAATCGA                GTGA TATA TCAC                 GGCGCCAGGGCAATC  44 22
CTM43_RS22565 4593890 .. 4593926 -  -5.2  -3.60074   CAGAAACGGTGCAAA   CCTACGGGCGGTACG CCGCCAAC CATACCGC-CGTACG    CCTCGACGCGGTCAG  56 220
CTM43_RS22555 4592265 .. 4592288 -   -11  -3.37761   CGGGAACAAACGGAA          CCCGC-CAGCG CAC CACTGCGCGGG          ATCGATGAAAGCACC  73 259
        citC NONE
CTM43_RS22515 NONE
CTM43_RS22510 4582687 .. 4582697 -  -4.6  -3.20227   CCTTAATCACGAATA                 CCGG AAG CCGA                 GAGCGCCACCACTTT  50 2
CTM43_RS22505 NONE
CTM43_RS22500 4580163 .. 4580199 - -12.9  -2.75481   CGGGAAGGCTAATGA    TGGCGCCCTCGCCCGTA CAG TGCGGGCGAAGGCGGTA    TTGCAGTGGGTTACA  81 36
CTM43_RS22495 4579087 .. 4579105 -  -9.6  -5.93252   CGCAAAAATAAAAAA             GGGCAACA AAA TATTGCCC             TCTGCATCAATAACT 100 80
CTM43_RS22490 NONE
CTM43_RS22485 4574257 .. 4574280 - -13.2  -5.75342   TGCGGCCAAAAAAAA          TAGGCTGACG ATGT CGTCAGCCCA           GGATTGTTGCTATCC 100 57
CTM43_RS22480 4573825 .. 4573842 -  -4.9  -2.91735   GCAAGAGTGTAGACA             GTTAAGCG AAC CGCTTA-C             AATGATAACTGTGAT  47 92
CTM43_RS22475 NONE
        kefC NONE
CTM43_RS22465 NONE
CTM43_RS22460 4570677 .. 4570713 - -18.1  -4.21275   GCAATTCATGCAAAA    GAAAACCCCGGTCACGC CAG ACGCGACCGGGGTTTTT    TTATCGCTATCCTGC 100 45
        djlA 4562645 .. 4562665 -    -9   -4.4267   GGTCAAAAGTTAAAA           CCCCTCGCC GGAC GG-GAGGGG            CTGGAAACGTCAGAA  83 35
CTM43_RS22410 4558581 .. 4558607 - -10.9  -2.81464   GGAGCATTTAGGATA         CAGAACGCAGA TATTT TCGGCGTTCTG         TAGCGGAAAATAGCA  74 67
        citX 4557935 .. 4557951 -  -5.8   -2.5001   ACAATCCCGATTAAT             CGCG-GG CGAA CCACGCG              TCAATCATCTGCTCA  50 4
        araC 4546209 .. 4546235 -  -2.3   -5.0133   TACCCGGTTAAAAAA        CGA-AGCC-CGGA TTC TCCGAAGCCATCG        CGCCGTCGTCAAGCC  73 108
CTM43_RS22360 4545309 .. 4545329 - -13.9  -2.64243   CCACAGCGTAGAGGA            CGCCGCGCG CAT CGCGCCGCG            CTCGATGGTGGTCGC  74 118
        sgrT 4539765 .. 4539787 - -13.5  -5.52347   AAGAAAACGAAAAAA           GCCAGCAGA GGCTT TCTGCTGGC           GGGTGATTCTATACT 100 234
CTM43_RS22330 4538510 .. 4538546 - -16.5  -2.79188   TATCGAACTCAAGTA    GGCCTAGTCGCCCCGGC GAT GCCGGGGCGAGTAGTCA    GATATCCTTCACCTT 100 23
CTM43_RS22320 4535645 .. 4535658 -  -5.9  -3.27298   CTGTTCAATGATGAA               GCGCA GATC CGCGC                GCTGGTTGACGATGC  51 439
        leuO 4524238 .. 4524251 -  -8.1  -5.71712   TGTCATATAAAAAAA               GGAGC CGAA GCTCC                TTTGCTATCTATCGT 100 48
CTM43_RS22260 NONE
        ilvN 4521616 .. 4521636 - -14.7  -6.06723   TTTCGCAAAAAAAAA            GCCCGACAG TCT CTGCCGGGC            TATTTTTACAGCAGT 100 50
CTM43_RS22250 4520256 .. 4520266 -  -2.6  -4.72631   ATGAATGTAACAAAA                 TAAT ACA ATTA                 AAGTCCGCGCAGTCA  68 235
CTM43_RS22245 NONE
CTM43_RS22240 NONE
        ftsL NONE
        ftsI NONE
CTM43_RS22225 NONE
CTM43_RS22220 NONE
CTM43_RS22215 NONE
CTM43_RS22210 NONE
        ftsW NONE
        murG NONE
CTM43_RS22195 NONE
CTM43_RS22190 NONE
        ftsQ NONE
        ftsA NONE
        ftsZ 4502912 .. 4502933 -  -5.2  -3.08312   AATTTACCTATCCAA           CCGA-AGTG TACAC CACTATCGG           GAGGCCAGTTTAGCA  51 75
CTM43_RS22170 4501903 .. 4501944 -    -8  -5.54907   GCTATAAAAGAAAAA CGACTGGCTCCCTGGT CGGAGAGAGT ACCAGGTTACCAGTCG  AATTTACTGAATGGT 100 46
        secM 4501097 .. 4501110 -  -4.5  -3.80207   TAATAAAATCTCAAA               CGC-CC CGC GGTGCG               GAGTCACAAAAAATA  59 60
CTM43_RS22160 4498339 .. 4498356 - -12.7  -5.24129   GCGCTCCATAAAAAA             GGCGCAG AACT CTGCGCC              TTTGTTTGTTTTATC 100 46
        mutT 4497890 .. 4497905 -    -6  -3.18274   TTGATGGCAAGCTAA              CCCGGC GCCT GGCGGG               TTAGCCTCGCGACCC  55 46
CTM43_RS22135 4494887 .. 4494911 - -17.2  -3.99324   CGGGAGGATGAGAAA          CACTGGCGCC GCGCA GGCGCCAGTG          CAGCCGATTACAGGC 100 33
        ampD NONE
        ampE 4488959 .. 4488969 -  -8.2  -3.01924   CAGCTGGCGGGAAGA                 CGGG ATG CCCG                 ACTTCGGTATTCCAC  57 293
        pdhR NONE
        aceE NONE
CTM43_RS22075 4478928 .. 4478945 - -14.1  -5.31275   GGTTATCAGAAAAAA             GCCGGCC GTCA GGCCGGC              TTTTTCGATTACATC 100 34
        lpdA 4477280 .. 4477296 - -13.7  -5.64274   TCAGGCATAAAAAAA              GCGGCTC CCG GAGCCGC              TTATGCTTTTTTCCT 100 52
CTM43_RS22065 4476835 .. 4476862 - -19.2  -5.81032   GAACCTTAAAAAAAA        CGCCCGGTTGCA CTCA CGCAACCGGGCG         TTTTCATTCACTTAG 100 37
CTM43_RS22050 NONE
        acnB 4471301 .. 4471328 - -12.8  -5.27335   GTTTGGAAATAAAAA        TGCCCGGTGA TGCAATGT TCACCGGGCA         TTGGAGAGTTTATCG 100 71
CTM43_RS22040 4470680 .. 4470706 -  -7.2  -2.87319   TGTAATCTATGAAAT        GCCCGGC-GGC GCTTTT GCTTGCCGGGC         CTGTAGTTCTGCGCC  57 144
        cueO 4463994 .. 4464011 - -11.3  -4.49716   AAATAAAACGCAAAA             CGGCAAC GAAA GTTGCCG              TTTTTTTTGGTGTTC 100 82
CTM43_RS22000 4460626 .. 4460643 -  -8.4  -3.10715   TCGACGATTATGCAA             TCCGCG TGGAAG CGCGGA              CAGAAGGTGACCATC  60 235
CTM43_RS21990 4459015 .. 4459027 -  -3.3  -3.11988   CGCGACCCAATAAAG                CTGCA TCA TGCTG                ATTCTCCTTTTCGCT  46 18
CTM43_RS21985 4458203 .. 4458243 -  -7.6  -2.90029   GGAGTCAAAGATAAG  CGGTTAGCGCTTCGCATA TTTAC TTCAGGAAGCGCTAACCA  TGATGAGTATCAGCT  59 35
CTM43_RS21980 4457671 .. 4457686 -  -4.6  -4.65916   GTTATTGTAACAAAA              GCGGTA TCTG TCCCGC               TGCTTAATTTCCCCA  71 29
CTM43_RS21975 4455884 .. 4455901 -  -6.9  -4.59109   GACAGCGGGTAAAAA             TCGGGCA ATAC TGCCCGG              GCTTTTCTCAGGGCG  77 502
        hrpB 4446812 .. 4446838 - -12.3  -2.52464   GCGTTTGCGAACCGA        CTGGCCGGGCAG GATG CCGCCCGGC-AG         CGGCGGCTACGAGTA  78 32
        pulA 4431340 .. 4431357 -  -4.7  -3.57783   TCACGATAACGAGAA             GGCGCCC TTAC GGATGCC              CCAGACTGCTGACAA  55 232
CTM43_RS21850 4430401 .. 4430450 -    -5  -3.63367   GCTGCCAACAAAAAC CTGCCTCAACGCTCAGCCCGGCCA TCAG CAGCCAGGCGCAGC-TCGAG-CAG CTCTCGTCCGTGGCG  53 325
CTM43_RS21840 4427152 .. 4427177 - -14.9  -5.65177   ACAGGCATAAAAAAA         CCCCTTAATAC TTTC GTATTAAGGGG          TCTGGTCGTGCGGTC 100 45
        fhuA 4424727 .. 4424746 - -16.4  -2.92653   CGATAACCTGATAGA            GGGCGCGG CGAA CCGCGCCC             GTAGGTGGTTAGAAA 100 34
        fhuC NONE
        fhuD NONE
        fhuB 4420612 .. 4420634 - -10.5  -3.22388   GACTGAACTGACTAA           CCAGCTGGC GCAAG GCCTGCTGG           ACGCGGCGCGTGACG  68 434
        clcA NONE
        erpA 4417541 .. 4417560 - -12.2  -4.78029   GTAATAAAAGCAAAA            CGGTAACC TTAA GGTTACCG             TTTTTAGGGTTTGCT 100 66
CTM43_RS21785 4413700 .. 4413712 -  -2.7  -2.82834   TACGTGACTATCAGA                GTCAT TTT ATAAC                GCTAAGTTCCGGAAT  42 93
        degP 4412165 .. 4412191 -   -18  -5.35354   CACAGAACGAAAAAA         GCCCCTGCCCTC GGC GAGGGAAGGGGC         TGGGAAGCGAGTGCT 100 46
CTM43_RS21775 4410497 .. 4410511 -   -10  -4.40003   TTTCAGAAAGACAAA               GGCGAA TTC TTCGCC               AAGAGCGTGAAGTTC  85 402
        rpsB 4404802 .. 4404820 - -10.2  -5.22039   CGTAAATTGAAAAAA             GGGGCCGA TAA TGGGCCCC             TATTCATACACGGTA 100 62
CTM43_RS21745 4403852 .. 4403873 - -13.7  -4.58685   AAATGGGCGCAAAAA           GAAGCCGCC CTCA GGCGGCTCC            TTTTTTTAAAAATTA 100 38
CTM43_RS21740 4402896 .. 4402910 - -11.4  -2.64616   GTCTCAGTCAGACCA               GACGGG GCA CCCGTC               GGAAAATGAGCTAAG  75 125
CTM43_RS21735 4402228 .. 4402247 -  -6.4  -2.59927   AATCCCGAGAATTGA            GCGTACAG TCTT CTGTACGG             CGTTTCAGATTTTAC  53 80
CTM43_RS21730 NONE
CTM43_RS21725 NONE
CTM43_RS21720 NONE
CTM43_RS21715 NONE
        rseP 4397636 .. 4397653 -  -2.7  -4.15044   GTTCTTCCTAACAAA             CTCTC TTATAACC GAGAG              AAATCATTGAAAAGT  59 13
        bamA NONE
CTM43_RS21700 NONE
        lpxD 4393481 .. 4393517 - -10.1  -3.57992   AAGGCAATAATAACA    CGGCCTGCGGCAATC TTTTAGC GAATGCAACAGGCCG    GAAATGTCATGTGAC  77 52
CTM43_RS21690 4392979 .. 4393000 -  -4.3  -2.77899   CGGTTTTATCAATCA           CGTATCAGG CCTC CCGGCTACG            CGCACACATCATCGT  45 8
CTM43_RS21685 NONE
CTM43_RS21680 NONE
CTM43_RS21675 NONE
CTM43_RS21670 NONE
        accA 4385928 .. 4385946 -   -16  -5.71712   TCGCACATAAAAAAA             GGGCCGGA AAA TCCGGCCC             TTAGTGTTAAGTCCT 100 51
CTM43_RS21660 4383683 .. 4383700 -  -3.4  -2.52464   CCTTCTGTTAAGCCA             GC-CACG TTACT CGTGCGC             GCCGTTAACGCGCAA  42 30
CTM43_RS21655 4383228 .. 4383250 - -15.6  -2.61106   CATACCGAGAAGTGA           TGGCCCGGCA CGT TACCGGGCCA           GGGTCGCGCTGGCAA  95 44
        tilS 4381897 .. 4381912 -  -7.5  -4.86621   ATCCTGAATCAAAAA              CGGGC TTAATC GCCCG               TTTTCCTCCACATCA  85 15
CTM43_RS21635 4380700 .. 4380713 -  -2.3   -2.6155   GCGGCTAATAGTAAT               CATGC CGAC GCTTG                CCAGGCGGTAAGCTG  39 11
CTM43_RS21630 NONE
        nlpE 4379148 .. 4379174 -  -7.8  -2.71712   GTGGCCTGGCTAAAG         CGCAGCTGGGCG ATG CGGCAAGCGGCG         ACAAGAAAGCGTGGT  54 399
CTM43_RS21585 4372018 .. 4372030 -  -2.6  -3.12351   CTCTTTCAGAGTCAA                CCCG TTTTT CAGG                ATTTTTCTCTGCAAC  45 171
CTM43_RS21580 NONE
CTM43_RS21575 4370071 .. 4370086 -  -7.6  -3.17075   GCGTGGTGAAGCGAA              GCATAC TGAA GTATGC               GAGCTTTGCCACAAC  62 59
CTM43_RS21570 4369881 .. 4369914 -  -6.7  -4.49756   TTTTAAAGAGCAAAA     CTTCGCAGTGCACCT TTTC AGGTTCACTCTGAAG      TTTTCTTGTGTTCGC  77 49
CTM43_RS21565 4366843 .. 4366863 -  -3.9  -2.73903   AAAATTCTCTCAAAT            CCGCCAAAA CAT CTTCGGCGT            TGTAAGGTTAAGCCT  44 17
         rrf NONE
CTM43_RS21555 4366389 .. 4366410 - -15.9  -5.69793   AGATCAAACAAAAAA           GCCCTGAGC AAAT GCTCAGGGC            TCTTAATAAGTGGCG 100 36
        dkgB 4365384 .. 4365401 - -11.3  -4.21462   AGCGACCACGTAAAA             CAGCTCC CGAA GGAGCTG              TCGTAATACCTTCTC  87 77
CTM43_RS21540 4363133 .. 4363151 -  -3.8  -4.27117   CCTCGATAACAGAAA             CCAGCC CGACGAC GACTGG             TTATTCTGTTATAGG  62 81
CTM43_RS21535 4362253 .. 4362280 -  -4.9  -4.71426   TTTTGAGTAATAAAA       GGCAGCACCATGC ATGC GCA-GGC-CTGCC        CCATGGCAGGCCTGA  73 52
CTM43_RS21530 4361408 .. 4361428 - -10.4  -4.82901   CTGGTTCGACAAAAA            GGCACCGA CTTCC CCGGTGCC            TTTTTTGTTGCCTAA 100 42
CTM43_RS21515 4358154 .. 4358174 -  -3.9  -4.14392   CTGGAAGCGTTAAAA            GAGCATTGC GAA GTAGTGCTC            AGCACTGACAGCCAG  62 289
CTM43_RS21505 4357038 .. 4357048 -  -2.4  -2.76189   TAACCGACTGAACTA                 CCGC TCC GCGT                 TGTTGTTCCGTTGGG  40 155
CTM43_RS21500 4356933 .. 4356956 -  -7.4  -3.93659   ACGAAAACGACGAAA          GCCTGAATCA TTGC TGGCTCAGGC           TTTCTGAATAGTGGC  69 37
CTM43_RS21490 4354853 .. 4354866 -  -2.3  -4.00038   CACCATTATGATAAA               CGGCA CCTG TTCCG                TATGGCCGATGAACA  56 492
CTM43_RS21475 4351036 .. 4351066 -    -6  -3.87815   CCTCACCCTCACAAA       TCACGACGGCGCCG GAG CGAGGCCACCGTCA       ACAGTACACACTCAC  64 48
CTM43_RS21470 4350166 .. 4350191 -  -9.7  -3.95787   CAGCAGACCCACAAA         CCGCCGGTC GTATCAGT GACCGACGG          CCGCTATGTGGTGAG  78 81
CTM43_RS21455 NONE
CTM43_RS21450 NONE
CTM43_RS21445 NONE
CTM43_RS21440 NONE
        nqrE NONE
        nqrF NONE
        nqrM 4342682 .. 4342695 -  -9.5    -5.055   TCAACGGCTAAAAAA               GCCGC GAAA GCGGC                CTCACATTGCTGGCA 100 394
CTM43_RS21415 NONE
CTM43_RS21410 4340098 .. 4340118 - -19.7  -3.35349   AAATAAGCCCCACAA            CCGGCGGCG GCC CGCCGCCGG            TTTTACCCCGCATCA 100 38
CTM43_RS21400 4337869 .. 4337892 - -19.6  -6.04378   AAAGGATAAAAAAAA          CCACGCCCGG CAAG CCGGGCGTGG           TAAATAGCACTGTCC 100 48
        frsA NONE
CTM43_RS21390 4336112 .. 4336127 -  -4.6  -2.81547   TCCGTAGATCAATCA              GGCCCG CAGG CGAACC               GGCTCGCTGAAATCG  47 7
CTM43_RS21350 NONE
CTM43_RS21345 4326921 .. 4326961 -  -3.1  -4.25104   GGCCCTGGAGCAAAA  GCTGGCGATTGCCGAGG CACGTCT CGCCGGCAGTCGCTATC  TGGTGGGCGATACGT  60 245
CTM43_RS21335 4325659 .. 4325672 -  -2.3  -3.78409   CTAACGCAAGGCAAA               TGGCG CTAC CGACA                AATGCGGTGATGAAG  50 172
CTM43_RS21310 NONE
CTM43_RS21305 NONE
        accC 4315328 .. 4315343 - -11.8  -4.42976   CGATAAATGAAGAAA              GCCGCC CGGA GGCGGC               TTTGGGGCTAAGTTC  93 39
CTM43_RS21295 NONE
CTM43_RS21285 NONE
        pxpB NONE
CTM43_RS21275 NONE
CTM43_RS21270 4309228 .. 4309256 - -12.4  -3.74158   CTAAGCAGAGTGAAA        TGCCTGCCTGGC GTCTG ACCCGGCAGGCA        TTTTTTTATCGTTCC  88 182
CTM43_RS21260 4306616 .. 4306626 -  -8.2  -2.63631   GCAAGGGTCAGAGCA                 CGGC TGT GCCG                 CGCGCCAGAGTAGTG  61 106
CTM43_RS21255 4306155 .. 4306165 -  -5.4  -3.29043   AAGGGGTCCTTATAA                 CTTC GCG GAAG                 CGGCATCCGTGGGCA  54 9
CTM43_RS21250 NONE
CTM43_RS21245 NONE
CTM43_RS21240 NONE
CTM43_RS21235 4302978 .. 4303000 - -14.2  -3.16859   CACGACAATACAAAG           CGCCCGATGA AAT TCATCAGGCG           TTATAAGGCTGAAAA  90 75
CTM43_RS21230 4302387 .. 4302403 -  -5.1   -3.9777   TCGAACAGGTACAAA              GCGTGAA CAG TCCACAC              GAACCGCTATCAACT  64 363
        phoE 4298282 .. 4298301 -   -15  -5.75342   CGCCGCTAAAAAAAA            GCCGCAGC CAGG GCTGCGGC             GGGTAGTTCTGCGGT 100 44
CTM43_RS21195 4296396 .. 4296423 - -11.2  -4.38774   AAGATGACAGGAAAA        TGAACCGGACGC CGCA GCGCCCGGCTCG         CCATCAGCCGGCGCG  91 29
CTM43_RS21190 4295428 .. 4295439 -  -5.8  -2.82635   AGCGCCACCAGGAGA                TGCC ATCA GGCA                 CGGAGCCGCTTTATT  52 252
CTM43_RS21185 4294959 .. 4294969 -  -8.2  -3.33815   AGGCCCGGCAAGCAA                 CGGC GCC GCCG                 GGCGATGGCATCAGG  66 310
CTM43_RS21155 4289736 .. 4289747 -  -2.2  -5.12617   GAACCATTTAAAAAA                CAGA ATTG CCTG                 GGTGTTACTGAACTA  73 30
CTM43_RS21150 4289054 .. 4289073 -   -15  -5.00616   CCGTCCGTGAAAAAA            GCAGGGGG AGAT CCCCCTGC             TGGTGCATCAGAAGG 100 42
CTM43_RS21145 NONE
CTM43_RS21140 NONE
CTM43_RS21135 NONE
CTM43_RS21130 4283231 .. 4283264 - -10.2  -3.53012   TCGCTCCCGGGCAAA     CGCTGCGCCTG-GTG CTGCT CCCGCAGGCGCTGCG     CAACGTTCAGCCGTC  71 261
CTM43_RS21105 4279831 .. 4279878 - -19.9  -4.11692   TAGGCATGGTCAAAA CTGCCTG-GGCTGCGGCGGCGC CTCCT GCGAGGCCGCAACCTCAGGCAG TCTCTTGCTACACAA 100 82
CTM43_RS21060 NONE
CTM43_RS21055 4268558 .. 4268576 -  -7.4  -4.58395   GCCACCCGGCAAAAA             CTTAGCGC TTC GCGTTAAG             CGCGGCGATGTCCTT  80 8
CTM43_RS21050 NONE
CTM43_RS21045 NONE
        tauC NONE
CTM43_RS21035 4264825 .. 4264839 -  -8.5  -4.09685   CGGTAGCCCGGAAAA               GGCGC GTCAG GCGCC               GTCTCCGGGAAGCAG  76 92
CTM43_RS21015 NONE
        sbmA NONE
CTM43_RS21005 4256969 .. 4256982 -  -6.7  -4.16251   ACACAACGGCGAAAA               CAGGA TTAT TCCTG                GACGGCAATTACCAG  71 428
CTM43_RS20995 4256099 .. 4256136 -  -6.9  -4.82855   CAGCAAAGTTAAAAA   CGAAGAGCAGTACCATC AGGC GGTGGCCCTGGCCTTCG    AATTTGACCATAAAG  84 519
CTM43_RS20985 4254723 .. 4254735 -  -5.5  -4.11216   GCTTTATGCTCAAAA                GCAGA AGC CCTGC                CCGCGCATGCCGAAA  64 7
CTM43_RS20980 4253311 .. 4253342 - -13.9  -3.63515   GCTGACGGCGAATAA      TGCTGACGGTATC GCAATA AATACCGTCAGCA       GAGGTTCAGGCGTTA  95 31
        iraP 4252760 .. 4252807 -  -3.6  -5.02502   GAGATGACAGAAAAA TGACGGCATCCTTGTCG-T-GTC ACAAA GACTAGCTACGAGGATGCCG-CA ACAGCTTCTTTAGAT  75 6
CTM43_RS20970 4251233 .. 4251264 -  -9.3  -6.06529   CAGATAGAAAAAAAA      CCAGCCGGTGACG CAATTT CGCCACCGGCAGC       GACTTATTTGAGACT 100 29
CTM43_RS20965 4250835 .. 4250852 - -12.7  -4.09628   TAGGTTAAAGAACAA             GGGAGCG CGTG CGCTCCC              TTTTTTTCAGGCTTT 100 32
CTM43_RS20955 4249136 .. 4249159 -  -4.4  -3.53012   CGGGCGCGCTGCAAA          CGGCCGCTGGC GTG GCAGGCGG-CG          TGGTGCTGGGCAATA  53 273
        aroL 4247805 .. 4247817 -  -6.2  -2.95409   GAACTATTAAGTATA                GGCG CCCCT CGCC                GCCTTAATGTAAGTA  53 46
CTM43_RS20940 4247532 .. 4247567 - -12.6  -2.96611   AAAAAATGTGAGATA    CGCCCGATATTGCCAGC ATG GCGGGCAAT-TCGGGCT    CAGGGGGTTACGACT  83 33
CTM43_RS20935 4246606 .. 4246624 -    -3  -3.09581   TAAAGGCTCAATATA             GGGGGC GCTCCTT GCCCCT             GTCACGCGAAATTAA  45 45
CTM43_RS20930 4246251 .. 4246269 - -13.1  -4.72473   GGAAGGAAAAAACAA             CCCGGCG GCAGA CGCCGGG             CGTCACGCTGGCTTA 100 38
CTM43_RS20920 4244231 .. 4244289 - -15.7  -2.71731   GTGAGGTCTGAATTA TGGCGATGTCCCCGCCCCCTAACCCTCTCC CGAG GGAGAGGGTTAGGGGGCGGGGA-A--GC-- GGTTCAGGTCCCCTG  95 29
CTM43_RS20905 NONE
        phoR 4237643 .. 4237662 - -12.2  -4.41494   GACTGCCAATGAAAA            TGACCAGC TGAA GCTGGTCA             TTGGCAAGATAAACT  95 54
        brnQ 4235911 .. 4235933 -   -12  -6.07374   ACAAAAAATAAAAAA           CCACGGAACC CGA AGTCCCGTGG           TTAAACGCTTGTCCT 100 50
        proY 4234436 .. 4234467 -  -5.6  -3.40403   TTTGGGGGAGGATAA      CGGGGGAGGACGCG GGAC CGCAAGCCGCCCCG       GCCGCGCGATGCTGA  54 56
CTM43_RS20885 4232280 .. 4232292 -  -6.2  -3.40403   TCTCCTCGACGAGAA                GCCG CAAAT CGGC                GTCGATGATTTCGCC  56 262
CTM43_RS20875 4230560 .. 4230579 -  -4.9  -3.64703   CTTGCTTCAGGGAAA            TGGCCGG TTTTCT CCTGCCA             CTCTCCATAAATGAT  57 168
CTM43_RS20870 4229972 .. 4229983 -  -5.8  -2.63079   TTGCGACATAACGCA                CTCC TTGA GGAG                 GCTGACTCAGTTTTT  51 32
CTM43_RS20865 4228059 .. 4228087 - -23.9  -3.53012   GGCCTGCGGCTGAAA        CCACCGCCCCGAC GCT GCCGGGGCGGTGG        CGTCAGGTATCAAAA 100 35
CTM43_RS20825 4220976 .. 4220989 -  -9.5  -3.29144   TTATGGCGTCTACAA               GCCGG CGTA CCGGC                CTTTTCAGGGACGCT  73 30
CTM43_RS20820 NONE
        yajC NONE
        secD NONE
        secF 4216502 .. 4216522 -   -14  -5.40072   TCGCGGGCAAAAAAA            TCCCGGCC GCAAG GGCCGGGA            TTGCTTTATCTCAAC 100 50
CTM43_RS20800 NONE
CTM43_RS20795 4215292 .. 4215322 - -18.2  -2.50035   GATACAGCAAGACAG       CGCCCGGGCCGCAG CTC CTGCTGCCCGGGCT       TTTTTATTTCTCCCG 100 29
        nrdR NONE
        ribD NONE
CTM43_RS20770 NONE
        nusB 4210806 .. 4210841 - -14.1  -4.42118   CAAAATAATAAATAA   GGCCGGGC-T-GCGAGG CGAC CCTCGCAAAACCCGGCC    TGCAGTTTACTTCTT 100 32
CTM43_RS20760 NONE
CTM43_RS20755 4209117 .. 4209156 -   -12  -3.90112   TGGCTGTTAAGCAAA  CCCGGCGTCGCCGCGCCGA TTA TCGGCCCGTCG-CGTCAGG  AACAGCTCGATGATC  83 178
        thiI 4203534 .. 4203554 - -12.6  -4.87626   TGCCAATAGTAAAAA            GGCCTTCC ATCAG GGAAGGCC            TTTTGCATCATAACA 100 46
CTM43_RS20710 4200793 .. 4200808 - -11.8  -5.01732   AAGGGGTGTAAAAAA              GCGGGG AATT CCCCGC               TTTTTGCTGTCTGCC 100 48
CTM43_RS20665 4189666 .. 4189687 -  -4.5  -3.90744   CCCTTTGGGAAATAA           TCACTACAA GGAA TTGCAATGA            AAGAGTTAACACTGA  59 394
        bolA NONE
CTM43_RS20615 4181247 .. 4181268 -  -3.6  -3.61239   GACATTCATATATAA           GACGCGGC ATTATA GCGGCATC            ACTTTTGTGAGTCGA  50 72
CTM43_RS20605 4179755 .. 4179776 - -11.5  -6.09133   TATCTTAAAAAAAAA           CCCGCCGCC TTTC GGCAACGGG            TTTTTGCTCGAACCT 100 59
        clpP 4178774 .. 4178804 -   -11  -2.54896   CCGGTAGCGAAGCCA       CCGGCCGCAAGCCT GCC AGACAAGCGGCCGA       ATAAAAGCCAACCGC  72 98
CTM43_RS20595 4177297 .. 4177325 - -11.1  -4.77157   GGAATGCAGGAAAAA        TAAAAGGGGAGAT AAA ATCCCCCCTTTTT        GTTAACTGCTTGAGT 100 52
CTM43_RS20590 4174752 .. 4174781 - -14.4  -5.72616   AGCTACACAAAAAAA       GGCTGGCAAGTC CGAAAT GACTTACCAGCC        CTATTTTTATTAGCG 100 58
CTM43_RS20585 4174276 .. 4174295 -   -10  -5.52096   AAAGGCAATAAAAAA            GGCACATC TCAC GATGCGCC             CTTGTACTTCGTCAC 100 62
CTM43_RS20580 4172180 .. 4172197 - -14.1  -3.91402   TCACAGAAATGGAAA             GGGCCGC GAAA GCGGCCC              TTGAGGATTACATCG 100 71
CTM43_RS20575 4171654 .. 4171679 -  -8.3  -3.09516   TTGTTTATGAGGTAA         GAGGTCACACC ACTT GATGCAACCTC          TTTATCCTGGCAAAA  63 72
CTM43_RS20570 4170895 .. 4170908 -  -2.3  -4.15222   ATGTGGCTGAATAAA               GCCGA GACC TGGGC                GCTCGCCGACTACTG  59 330
         cof 4167648 .. 4167669 - -13.1  -5.63504   AAGGCGATAAAAAAA           GCCAGATAG AAGC CTATCTGGC            TTGCTGGAAGGGTCT 100 43
CTM43_RS20545 NONE
CTM43_RS20540 NONE
CTM43_RS20535 4162268 .. 4162282 - -12.8  -5.42514   CCAGAAATGAAAAAA               GGCCGC AAA GCGGCC               CTTTGATGGCAAAAA 100 172
CTM43_RS20530 NONE
        amtB 4160478 .. 4160495 - -12.7  -5.66684   CAACGCATAAAAAAA             GCCTCCC GGAC GGGAGGC              TTTTCGCTATCAGGA 100 57
CTM43_RS20515 4158876 .. 4158891 - -11.8  -5.86332   TGAAGGCAAAAAAAA              GCCCCC ATCC GGGGGC               GTAGCGAGCTTACTG 100 35
         ffs 4157612 .. 4157622 -  -2.6  -3.59981   TATGACAAGTAAATA                 TTAT GGA ATAA                 AAGAAGGGGGGTTTA  49 143
CTM43_RS20495 NONE
CTM43_RS20490 4156835 .. 4156858 - -14.6  -3.02095   AATATAAGAAAATAG          CGACGGGCTG ACTT CAGCCCGTCA           AATGACCTTCATCCA  91 128
CTM43_RS20480 4154662 .. 4154684 - -14.2  -2.87319   TGTAAGCGATGAAAG           GCCCTCTCCA TGA TGAAGAGGGC           GATGGGTTAATTCAG  88 37
CTM43_RS20470 4153210 .. 4153224 -  -7.8  -3.84451   GGGTGGAAACCGAAA               GCCAGC GCG ACTGGC               TGCGCCAGCATGGCG  68 164
CTM43_RS20450 NONE
CTM43_RS20445 NONE
CTM43_RS20440 4145358 .. 4145372 -  -4.4  -3.64236   ATGTAAAGGTGCAAA               TTTATT CAT AATAAA               CTTCCTGAAAAAGAC  55 51
CTM43_RS20435 4143274 .. 4143293 - -13.6  -6.10295   TTAAGATAAAAAAAA            GCCTGCTC GTCA GAGCAGGC             GTGGAGAAGAAGAAA 100 41
CTM43_RS20430 4142728 .. 4142746 -  -5.2  -3.66803   TCCGAAGATGGTAAA             CCGTTTGA AGA CCAGACGG             CGAATAATACCTGGA  58 209
CTM43_RS20420 4140158 .. 4140173 -  -8.2  -3.37732   AGAGTAAGGTGATAA              GGCGAG TTTC CCCGCC               TTTGGCGTCAGGGTG  66 33
CTM43_RS20415 NONE
CTM43_RS20410 4139563 .. 4139575 -  -6.2  -2.87132   GTTTTCGGTGATAGA                CGGC GAATG GCCG                GAGCTGGATAACGCC  51 112
CTM43_RS20400 4136862 .. 4136917 - -15.5  -2.96141   TGCAACATAAAATAG CCTTCAGGCTGAGCCTGCCGCGCCTGG TCCG CCGGGCGCGGCAGGCTCAT--TGCAGA ATTCGAGGACCAAGA 100 517
CTM43_RS20365 4129770 .. 4129808 -  -8.9  -3.01924   CAGCGCTGGCGAATA  GCG-GCGGACG-GCGCTAA AAA TTCACGCCCATCCGCGCGC  TACCTTTAAGCTGAC  66 31
        mscK 4126309 .. 4126329 - -15.4  -2.69151   CGCCCTGATACAGCA            GGGGCGGC TTTGC GCCGCCCC            TCTTCGCTCAGGACG  95 33
CTM43_RS20340 4124123 .. 4124140 -  -2.6  -4.07568   GCCCGCGCTCGAAAA             CGCCAG AATTTA CTGGCT              GTCGGCAACAATTGC  56 59
CTM43_RS20335 4123434 .. 4123454 - -11.8  -2.79796   GGTCATGCTATCACA            GCCCCGCC CGATC GGCGAGGC            TATGTGGAGGGATTT  76 43
CTM43_RS20330 4121449 .. 4121475 - -14.6  -2.64803   TCATCGTTAAAGGTA         CTGAATGCCAGT CAG ACTGGCATTCAA         ATGGGGCGAATACTC  90 22
CTM43_RS20325 4121089 .. 4121102 -  -2.3  -2.64099   GGTTTGCATCAGAAC               GGCAT CTTG AAGCC                TGGCGGCAGTTGCAT  39 5
        recR 4120440 .. 4120479 -    -7  -2.73771   GGACAGCGGGGAAAT  TTTTCAAGCGGAGGCGGC GAAG GCCGCCTCCATTTGTTCA   GAAAGTAATCTTGTG  56 23
        htpG 4118403 .. 4118435 - -22.1  -3.67864   CAATCCAATGTGAAA      TGCCCCGCCTGAGCA CAT CGCTCAGACGGGGCA      TTTATCCCATTCCCG 100 81
CTM43_RS20310 4117586 .. 4117615 - -13.7  -2.74598   GTAGAAATGAGATGA       GTTCTCATCCTGC CGCA GCAGGATGAGAAA        AGGCTTTATCAGCCG  84 34
CTM43_RS20305 4116496 .. 4116521 -  -9.8  -3.75144   AATAACAGGGAACAA         GCGGGAAATA GTAGCA TATTCCCCGC          CCTGCGCGCGATCAG  76 37
CTM43_RS20300 4114795 .. 4114812 -  -8.3  -3.53012   TGGTGGTGGTTGAAA             CCTCGCG CACC CGCGTGG              ATGAGCTACGCGAGC  62 378
CTM43_RS20285 4109988 .. 4110020 - -12.8  -3.18788   CGATTGATAAAACGA     TCCCGGATAGCGGCG CACG CGCCT-TATCCGGGA      TACCCAACTTGTAGC  84 90
        cueR 4104896 .. 4104910 -  -4.3   -5.0538   GGCGATCGGAAAAAA               TCATG ATCGG CATGA               TCCTCACCCACCCCC  81 468
        fetA NONE
        fetB 4102039 .. 4102063 -  -8.5  -3.56643   CCGACACCCCGGAAA          TCCAGCAGCTG CAG CAGCAGGTGGA          ACAGAATCCGGAGGA  66 359
CTM43_RS20220 4099289 .. 4099312 -    -3  -2.82623   TTCGCGCCAGAACCA          GCGGGCGA TCATGCTT CCTCCCGC           AGCTGGCCATCCACC  42 10
CTM43_RS20215 4096844 .. 4096865 - -14.4  -5.07652   GCGTTTAAAATAAAA           GCGCCGCC AAAAAA GGCGGCGC            ATCATCAAAATGCAA 100 46
CTM43_RS20210 4095392 .. 4095415 -  -7.4   -5.0133   CAGTTGGGGAAAAAA          GCCGGGAAAA TTCT CTTTCGCGGC           AGCTGGCAGGAGGTC  87 169
        cysS 4089330 .. 4089359 - -15.1  -4.48987   GCCTGACAACGAAAA       TAAAAACGCCCGC TTTT GCGGGCGTTTTTT        TATGGCTTACTTCCG 100 32
CTM43_RS20155 4087499 .. 4087524 -  -7.5  -3.38072   CGGATGGAACACTAA         CGCCCGCAGTT AGAA AAATGCGGGTG          GATGACAATAACGCC  62 326
CTM43_RS20090 4081824 .. 4081841 -  -9.8  -3.21912   TTTTTAACTCATCAA             CCCGGC CACCGC GCCGGG              TTTTTATTGCCCTAC  70 37
CTM43_RS20070 4079010 .. 4079028 -  -8.8  -3.64703   TGGTGTTGATTGAAA             GGCCGC TGGTTAG GCGGCC             GGAACGCCCTTCGGA  71 16
CTM43_RS20065 4078618 .. 4078630 -  -3.4  -3.28712   TTGCTTTCGCCATAA                GTGA CATGC TCAC                GTGCTACCTCCGGAT  48 153
CTM43_RS20060 NONE
CTM43_RS20055 NONE
CTM43_RS20050 NONE
CTM43_RS20045 NONE
CTM43_RS20040 NONE
CTM43_RS20035 NONE
CTM43_RS20030 NONE
CTM43_RS20025 4074073 .. 4074086 -  -9.5  -5.89827   AATGATGAAAAAAAA               CCGCC GGTA GGCGG                TTTCTTGTAGTCGAC 100 438
CTM43_RS20020 NONE
CTM43_RS20015 4072071 .. 4072090 - -10.6  -5.44721   ATTAGGCGAAAAAAA            GCCCGCTC AGAG GGGCGGGC             AGAAGGTAGGAAATA 100 325
CTM43_RS20010 NONE
CTM43_RS20005 4071690 .. 4071707 -  -8.4  -5.79595   CCTGAAAATAAAAAA             GCCTGC GGTTAG GCAGGC              AATAAGCATGAGGGT 100 160
CTM43_RS20000 NONE
CTM43_RS19995 NONE
CTM43_RS19990 4069962 .. 4069987 -  -4.8  -3.84422   TTACATACAAAAAAG         TCTAAGCATC ATCTTA GATGATTAGA          GCCTCATGACCGCTT  59 452
CTM43_RS19980 NONE
CTM43_RS19975 NONE
CTM43_RS19970 NONE
CTM43_RS19965 NONE
CTM43_RS19960 4064473 .. 4064505 -  -5.6  -3.12351   TGGGGTCAGAGCTAA     TTTGCCCTCAGGGCA GCAT TACCCGG-GGACAAA      TTGCCGATGTTGTCG  49 136
CTM43_RS19950 NONE
CTM43_RS19945 NONE
CTM43_RS19940 4061366 .. 4061379 -  -9.5  -4.63218   TTCTCCCGAAGAAAA               GGGGC CGAA GCCCC                TTAACCCTGTGCGTT  91 26
CTM43_RS19935 NONE
CTM43_RS19930 NONE
CTM43_RS19925 NONE
CTM43_RS19920 NONE
CTM43_RS19915 NONE
CTM43_RS19910 4059336 .. 4059352 -  -7.2  -5.60689   TCAGATAATAAAAAA              GGCCGC TCCAG GCGACC              TTATGTGGTTTTATT 100 46
CTM43_RS19905 4058526 .. 4058541 - -10.4  -3.88331   TGTAAACAAAATCAA              GGGCAG GATC CTGCCC               TTTGTTTTGCTTACG  82 36
CTM43_RS19900 4057798 .. 4057817 -  -8.5  -5.24129   TTTGGGTATAAAAAA            GCCCCGG ACTATG CCGAGGC             TGGTTTATTTGTTGG  95 30
CTM43_RS19895 NONE
CTM43_RS19890 4056618 .. 4056633 -  -4.6   -4.7497   GTGAGGGAGTAAAAA              GCCCAC CGTG GTTGGC               TCATTTCTTCTTCTC  73 26
CTM43_RS19885 NONE
CTM43_RS19880 4055846 .. 4055861 - -10.4  -4.79451   ACTTGAAATAGAAAA              CCCACC GTTC GGTGGG               CTTCTTCTCTGTCGT 100 57
CTM43_RS19870 4055164 .. 4055179 -  -7.5  -4.54821   ATGGGAACGACAAAA              CCCGC AGTTAA GCGGG               TTTGGTTATCAAGGC  80 48
CTM43_RS19865 4054527 .. 4054542 -  -8.2   -5.4505   CCGGGCAATAAAAAA              CCCCGC CGGA GCGAGG               TTATATATGTGATTA 100 79
CTM43_RS19860 NONE
CTM43_RS19855 4050795 .. 4050808 -  -9.5   -5.1675   TCACCCATTAAAAAA               CCCGC CGGA GCGGG                TTTGGTTTAGTTATT 100 36
CTM43_RS19850 4050260 .. 4050275 - -10.4  -5.24129   TCCGGGCATAAAAAA              TGCCGC GGCT GCGGCA               CTGATCTTTTATCAG 100 345
CTM43_RS19840 NONE
CTM43_RS19835 NONE
CTM43_RS19830 NONE
CTM43_RS19825 4046388 .. 4046409 -  -4.4  -2.50575   AAAAGGCGCACGAAG           CCCTCAGA AGTGAA TCTGATGG            TGTGCGCGAAGGTTG  44 58
CTM43_RS19820 NONE
CTM43_RS19815 NONE
CTM43_RS19810 4043041 .. 4043054 -  -3.1  -3.12948   TTAGAAGAAAGTAGA               GCGTT AAAT AACAC                ACTGTAATCACACAT  45 171
CTM43_RS19800 4042128 .. 4042139 -  -4.4  -3.40403   CCGCCTCTACCAGAA                CAGT GCTT ACTG                 CAAATAGGCTGCAGT  50 118
        uraH 4041382 .. 4041415 -  -4.5  -4.36914   CGTGGTGCGAGAAAA     GCGTGACGCCTGCG GAAGCCG CGCAGGCGTTG-GC     TGGATAGCGGCTTGG  67 45
CTM43_RS19785 4039342 .. 4039354 -  -6.9  -3.14132   CCGCCTGGGCAGGAA                GACGC CGC GCGCC                TCCTGCCTGTAAGGC  57 42
CTM43_RS19770 4037313 .. 4037331 - -13.1  -3.85698   TGCCGGGTGGATAAA             CGGCCCC TGAGC GGGGCCG             TGGACAGGGTTTACG  93 36
CTM43_RS19765 NONE
CTM43_RS19760 NONE
CTM43_RS19755 4033044 .. 4033059 -  -4.7  -4.51174   TGACCAGAAGGAAAA              CCTGT TTAAAG ACAGG               AAGTTGATGTTTCCT  70 81
        lpxL 4030716 .. 4030729 -  -3.8  -2.71011   ATCTCCTTGGAATTA               GCCT TCAGTC AGGC                CCTTTCAGTATACAC  44 91
CTM43_RS19740 4030353 .. 4030384 -  -9.5  -5.69473   GATAGCAGAAAAAAA      TAAGCCCGGAG-GC TTAAC GCGCTCCAGGCTCA      GTGCGTTGCGCGCCG 100 63
        cadC 4028500 .. 4028533 -  -5.3  -3.39488   GAAACATAAATTTAA     CCTCACCATGCCCAA AACC TTTTACATGATGAGG      GTTTACTTATTCTGA  54 32
CTM43_RS19730 4026781 .. 4026818 -  -8.3  -3.95073   CTCCAGATGTAGAAA   GCCCCTCCCGTCGCGTG ATGA CAGGTGATGGAAGGAGC    CTCAGGAAAACGGGT  73 47
CTM43_RS19725 4024575 .. 4024596 - -14.5  -4.59773   TTGCAGCGTGAAAAA           GGGAAGTGG CAAG CCACTTCCC            TGGTGTGCGTCTATT 100 39
CTM43_RS19720 4022995 .. 4023026 -    -5  -3.05384   CCGCTGTTGAGGTAA      TGCCCCCGGT-CGCG CTG CGCTTACCGGGGCTA      CGAATCGCAGCCCGG  49 74
        lysS 4021192 .. 4021213 - -17.3  -3.38118   ATAATGCAGGGAGAA           CCTCCCGGC GCAG GCCGGGAGG            GAGTGCAATGGATTA 100 38
        iolE NONE
CTM43_RS19700 NONE
CTM43_RS19695 4016921 .. 4016931 -  -4.6  -2.71011   AGGCCCGTGCAAGCA                 CAGC GCC GCCG                 GGCAACAGACATCAG  46 116
CTM43_RS19680 4013723 .. 4013734 -  -5.8  -3.63046   ATGAGAAGCAGACAA                CGCT TTGA AGCG                 ATCCCTCCCGGCGGG  61 98
CTM43_RS19675 NONE
CTM43_RS19670 NONE
CTM43_RS19665 4009851 .. 4009885 - -25.1  -2.62396   TATTTCTGGACAGGA     CGGGCGGCAACGGCA TCCTT CGCCGTTGCCGCCCG     TTGATAAGATTAGTG 100 35
CTM43_RS19630 4001599 .. 4001611 -  -6.2  -4.56597   GGGCCGGGGGAAAAA                GCGC GCTTA GCGC                TTTCCCTGGCGGTAA  75 76
CTM43_RS19625 NONE
CTM43_RS19620 3999642 .. 3999682 -  -5.3  -4.07568   CTCCGGCGGGCAAAA GCAGCTGGTGGGTC-TCG CCCAGT CGCTGATCCGCCAGCCGC  GCCTGCTGCTGCTCG  64 383
CTM43_RS19600 3996298 .. 3996313 -  -8.2  -5.59534   AAGGACAATAAAAAA              GGCCGC TTTC GCGACC               TTTATTCAGACAGGT 100 49
CTM43_RS19595 3995302 .. 3995326 -  -2.9  -2.80522   ATCTTATTTAATAAT          TCACTCATCAC AGC GCAATGAATAA          TAAAAATAGTGCAAT  42 401
CTM43_RS19590 NONE
CTM43_RS19585 3993177 .. 3993217 -  -2.3  -4.58466   TGGATAATCAGAAAA  GGAATCTTACGGCGGGCGC TCC ACGCCCGCAGGTACACTCT  GACATTATGTCCCGG  63 30
CTM43_RS19580 3991851 .. 3991861 -  -8.2  -2.55551   GATAAGTCGAAGGCA                 CCGC GCA GCGG                 CGATGTTGCTGGCCG  60 304
CTM43_RS19545 3985558 .. 3985575 - -12.7   -4.3129   CAGGCATCAGGAAAA             CGCCGTG CTGC CACGGCG              CGCGCGGGATGCGAA 100 48
CTM43_RS19540 NONE
CTM43_RS19535 3983134 .. 3983148 -   -10  -4.62054   CTAAGTAAAGTAAAA               GTCCCA TAT TGGGAC               TTTAGGGATCAACGT  91 53
CTM43_RS19530 NONE
CTM43_RS19525 3982151 .. 3982167 - -10.1  -3.34715   TATCGGCGGCAAAGA              CAGCGAG GAA CTCGCCG              GCTATCTCAACGGTT  69 285
CTM43_RS19500 3976411 .. 3976435 -  -4.3  -4.90869   ATTACGAATGAAAAA          GAGAATGAGAA CTA TACTCATTATC          TAATATCAAACAAGT  74 238
CTM43_RS19495 3975145 .. 3975162 -  -2.5  -3.83169   GATAAATGGATCAAA             GGGCCCG TCGC CGGGCAA              GTTATTTTTATTGCT  52 33
CTM43_RS19490 NONE
CTM43_RS19485 3971393 .. 3971408 -  -8.2  -5.22006   GGATCACAATAAAAA              GGCAGG CAGC CCCGCC               GGACGGCGGGGCATC  95 45
CTM43_RS19480 NONE
CTM43_RS19475 NONE
CTM43_RS19470 3967758 .. 3967809 -  -4.3  -4.68908   GCGATGGAAAATAAA GAT-GCCGTCCTGTTCGGCAACGA GCTCT CCGGTGCCTATCTCGACGGCTATC TTGGGGTGAAATAAT  71 59
CTM43_RS19460 3966125 .. 3966136 -  -3.6    -3.767   TACGCATTCATCAAA                CGCC CACC GGCA                 ACGATATTCGCGCGC  54 67
CTM43_RS19445 3962390 .. 3962410 - -10.3   -3.1355   CGGAGGGAGAGGGAA            CCGTCCAGC AGC GCCGGCCGG            GCAATACCCGAAGAT  73 72
CTM43_RS19435 3960674 .. 3960686 -  -3.3  -4.07568   GCTCCCCTGTCAAAA                GCGTA AAA TTCGC                TTATACGACAATTCG  58 91
CTM43_RS19430 3957635 .. 3957658 -    -8   -4.7373   TTATTTTATTAAAAA          GCAGCGGCCG CACC CGCCCGCTGG           ATGATCGCGCGATCC  87 293
CTM43_RS19380 NONE
        ramA 3949438 .. 3949475 -  -7.8  -4.07885   GACGCTGGCGCAAAA   GCTGGTTGAGA-CATTC CATAT GATGGATCTCAACCAGC   TCTATACGGTGCTGT  71 144
CTM43_RS19360 3946072 .. 3946095 -  -9.5  -3.25823   TCCTTGCGACAGTAA          CGCGCGCCT GCAGCG AGGAGCGCG           AGATTGTTCAGGCCG  70 33
CTM43_RS19355 NONE
CTM43_RS19350 3941732 .. 3941746 -    -7  -3.48593   GAGGTCGGCAGATAA               GGCGGG GCT CACGCC               CAAACGCAACGTGAA  64 144
CTM43_RS19335 NONE
CTM43_RS19330 NONE
CTM43_RS19325 NONE
CTM43_RS19320 NONE
CTM43_RS19315 3933736 .. 3933752 -  -7.9  -2.78384   TTGCCGCCGATCAGA              CGGCCAG GGC CTGGGCG              TTAGCGTCAATCGCC  59 4
CTM43_RS19310 3932058 .. 3932096 - -17.3  -3.85817   ATCTTTTGGTACAAA   GGGCTGGCCGCGGGCGG GATCG CCGCCGTCGGCCAGCTC   CAGCTATTACAGCCG 100 294
CTM43_RS19300 3929717 .. 3929774 -  -6.7  -3.25823   CCCGGCGCAGATCAA CACCCAGCAGCTCACCTGGCGCGCCGCC CAC GCCGGCGTGCTGATTGAGCC-CGGGGCG CGCCATTTTCTCAGC  54 145
CTM43_RS19290 3927316 .. 3927335 - -10.6  -3.13403   TCCTTCTCAGCAACA            GGCGGCGG TTAC CCGCCGCG             GAATATTACAGTCCG  73 31
CTM43_RS19285 NONE
CTM43_RS19280 NONE
CTM43_RS19275 3925171 .. 3925216 - -16.1  -3.78329   CGGGATTAAGCGAAA CCCGAC-GCATCCCCTGTCGGC GCT GCCGGCAGGGAATGCAGGCCGG ACTAACGGCTGCTTT 100 27
CTM43_RS19265 NONE
CTM43_RS19260 NONE
CTM43_RS19255 3920932 .. 3920942 -  -8.2  -2.55551   GATAAGTCGAAGGCA                 CCGC GCA GCGG                 CGATGTTGCTGGCCG  60 285
CTM43_RS19225 3914628 .. 3914639 -  -7.2  -3.65902   TTGATGTTAGCGAAA                CGCC TCCA GGCG                 CTTAATCTGCTGACC  67 5
CTM43_RS19205 3908222 .. 3908268 -  -3.5  -3.60006   AACCAGATGGTCAAA GGCCATCAGCTGCCCGCCTG-GG TGA CCACCGGCGG-CACCGGTTCGCC CGCGCAGACGGTGAA  49 342
CTM43_RS19195 3906540 .. 3906558 -  -7.3  -3.31144   CCCGCAGGCGGAGAA             CCGGCCG GAAGT CGCCCGG             TTCATCGCCTGGCTG  56 79
CTM43_RS19185 3904679 .. 3904703 -  -7.7  -3.57144   CCCGCGAGTTTGAAA          GCCAGACGCCG ATG CAGCGGATGGC          GAAGGTGGAAGAGAT  62 184
CTM43_RS19140 3895415 .. 3895435 -  -2.6  -3.10796   TTTCAGCATGGAATA            TTTATTCC AGCAA GGACTAAA            AAAACCAGATATCCC  45 153
CTM43_RS19135 NONE
CTM43_RS19130 3893576 .. 3893597 - -15.1  -5.40072   CGCGCCGTAAAAAAA           CCCGCGCGG CATT CCGCACGGG            TTATCGGTTTTAGAC 100 50
CTM43_RS19110 NONE
CTM43_RS19105 NONE
        entF 3884780 .. 3884790 -  -4.6  -3.33261   GCTGAATCGCGAGAA                 GGGC TAT ACCC                 TGGCGGCGGTGCTGC  51 296
        entS 3880396 .. 3880421 -  -6.1  -2.57132   CTGGGCGGGGAGAAC         CTCGCGGCCGGT CTG AACGGCCA-GAG         CCTGTTCCTGTTCGC  48 459
        entC 3878259 .. 3878272 -  -2.4  -2.76261   GGCCAACGGGTAAAT               GCAA TCATCC TTGC                CTCTTAGTTCAAGCC  40 29
CTM43_RS19065 NONE
CTM43_RS19060 NONE
        dhbA NONE
        entH 3874348 .. 3874358 -  -5.4  -3.81258   TTAACAACACCGAAA                 CATC GCA GATG                 CCGTACACCCACAGA  61 292
        cstA 3872124 .. 3872159 - -10.4  -2.77043   GGGAGGATCGGAAAT    GTAGGCCGGGTAA-GGC GAA GCCGCCACCCGGCACAC    CGGTTAATGCGCCCC  71 29
CTM43_RS19040 3871663 .. 3871681 -  -4.5   -5.0065   GATGCATAAAGAAAA            CGTCAGCC TGCA GGCCG-CG             TGGCGCATCCTGCGC  80 205
CTM43_RS19015 NONE
CTM43_RS19010 NONE
CTM43_RS19005 NONE
CTM43_RS19000 3863846 .. 3863862 -  -5.8  -4.12267   AGTACAATAACGAAA              CAGGGG AGCAA CCCCTA              AAAAAGTGCCATTTT  66 184
        mtnA 3860861 .. 3860876 -  -2.5  -3.54424   CTCGATGGCGTCAAA              CCGGA GGCGGA TCCGA               ACGTACGCTGGCTGC  47 463
CTM43_RS18950 NONE
CTM43_RS18945 NONE
CTM43_RS18940 3849122 .. 3849133 -  -5.8  -3.28712   CGCGCCGCTGCAGAA                TGCG GCGG CGCA                 AGCGGCTTAACGCCA  57 32
CTM43_RS18910 3840454 .. 3840477 -  -8.1  -3.95787   CATGAGATTGATAAA          CTGGTCGCC GAAAAG GGCTACCAG           AGCTGGGACGTCATC  71 460
CTM43_RS18895 3837882 .. 3837899 -  -4.1  -3.53091   AGCGTCTGCTGCAAA             CGTCG CTGGAGGC CGACG              GCTTTACCCAGCCGG  51 415
CTM43_RS18870 3833405 .. 3833422 - -12.7  -4.63218   GGTGTTGGAATAAAA             TGGGCGC GAAA GCGCCCA              TTGATTACCGGGTGG 100 109
        ahpF 3831702 .. 3831723 - -14.5  -5.70829   AAGAGTATAAAAAAA           GAGGCTACC CCTG GGTAGCCTC            TTTGTTATGCAGGTC 100 55
CTM43_RS18840 3827181 .. 3827201 -  -2.5   -4.8048   CCTTTATATGAAAAA            TCGACAC TAATGCT GTGTCGG            GTATCAGTACACCAA  67 176
        cspE 3826907 .. 3826922 - -10.4     -6.13   ACAGGCAAAAAAAAA              CCCGCT TATT AGCGGG               TTTTTATATTCTACT 100 51
CTM43_RS18825 3825628 .. 3825641 -  -6.7  -3.83864   AAAACGTCATAATAA               TTGCG GTGG CGCAA                ATCGTCGGTTCCGCA  66 3
        tatE 3825093 .. 3825130 -   -15  -4.82901   CGGCGTCGACAAAAA   CGACAAAGGCCGCAACG ATAAA CGTCGCGGCCTCT-TCG   CCGTACCGCCAGCAT 100 66
CTM43_RS18740 3808761 .. 3808784 - -16.8  -3.15879   AAATAAGACAAACCA          CGATGCGCGA AGCC TCGCGCATCG           TTTTTCGCACGCTTA 100 38
CTM43_RS18680 3794035 .. 3794050 -  -4.6  -5.15969   CTTCAATGCAAAAAA              GCTCAC TTCG GTGGGC               TTTTTTGCTATTGGC  80 114
CTM43_RS18640 3792657 .. 3792667 -  -3.2  -4.87318   GGCAAAATGGAAAAA                 CACA TTC TGCG                 CGAATGCTTTGAATC  76 348
CTM43_RS18610 3784608 .. 3784631 - -18.2  -5.75342   TTGCTGGAAAAAAAA          GCGGCGAAGG TTTC CCTTCGCCGC           TGAGGCAAAAACTCG 100 52
        glnS 3782775 .. 3782793 - -12.4  -5.95539   TCTGAAACAAAAAAA             GCGCCGCT GGG AGCGACGC             TTTGACAGAAAAGAA 100 44
CTM43_RS18595 NONE
CTM43_RS18590 3780547 .. 3780577 - -19.1  -5.78622   TCAGCGCAAAAAAAA       CAAACGGGCGGAG ATATG CCCCGCCCGTTTG       CCGCTGTCGTCTGAT 100 41
        seqA NONE
CTM43_RS18555 3774911 .. 3774931 - -12.6  -5.40072   TCCTTGCGAAAAAAA            TCAGGCCC GCAAG GGGCCTGA            TGGTAGTGCGTCGTT 100 39
CTM43_RS18550 3773914 .. 3773970 - -13.5  -3.05384   CGTGGGCTGATTGAA GCCGCCACCCGTAAGCCCGACCTCGCG ATC CTCGATCTCGGCCTGCCGGATGGCGAC GGCATTGATTTTATT  79 508
CTM43_RS18515 3766122 .. 3766141 - -16.4  -5.75945   AGCGGCGAAAAAAAA            CCGCCGGG GCAA CCCGGCGG             TCTTGTTATTTTCTT 100 54
CTM43_RS18510 3764377 .. 3764402 - -16.9  -2.72344   GGCCATCGCCAACTA         TCTGGCCGGCG TTAT CGCCGACCAGA          CCTCGCAGGCGTCAT  87 167
CTM43_RS18500 NONE
        pxpB NONE
CTM43_RS18490 NONE
CTM43_RS18485 3759727 .. 3759739 -  -3.5  -3.07291   AATTATTTGATTTAA                TTATT ATT AATAA                CTTAGGCGGACTATT  45 39
CTM43_RS18480 NONE
CTM43_RS18475 NONE
         pcp NONE
CTM43_RS18465 3756426 .. 3756441 - -11.8  -4.91109   TCCGGATCATAAAAA              CGCGCC TGCT GGCGCG               TTTTTTTATGCCTGA 100 77
CTM43_RS18455 3754082 .. 3754095 -  -3.1  -2.78384   GCGTTGCTTACCATA               CG-AGG ACT CCTGCG               AGAAGTGAAAGCACG  42 4
CTM43_RS18450 NONE
CTM43_RS18445 NONE
CTM43_RS18440 3750896 .. 3750924 -  -3.7  -3.85817   ATTTCGCCGTAGAAA        CTACCACGCACAC CGA GTGCACGTGCCGG        GGTTCACTTGTTGCG  55 336
        sucA NONE
        odhB 3746741 .. 3746785 - -16.6  -2.75268   TAATTATCTTTAAAC CTGTAGGCCTGATAACA-GCG CTAA CGCGTGTTATCCGGCCTACGG TAGGTAATACGCTTG 100 45
CTM43_RS18420 NONE
        sucD 3744598 .. 3744615 - -12.7  -5.25803   AACGGTCACAAAAAA             GGCCACC TGAC GGTGGCC              AACCATGTCGAAATC 100 76
        cydA NONE
CTM43_RS18400 NONE
        cydX NONE
        ybgE 3740650 .. 3740677 -  -5.6   -2.7264   AAACGGGGCGTAAAT        TTTTATGGGCTT ATGC AAGCCCATAGCA         TTAACAGAGATCTCT  48 44
        ybgC NONE
        tolQ NONE
        tolR 3739028 .. 3739044 -  -2.2  -3.48105   TGAAGCGATTAAATA              GGTTTG GTCAT CAAGCC              GACCGATTTAACCCC  47 2
        tolA 3737563 .. 3737597 -  -5.1  -2.82516   CCTGTGACTACCATA    GATTGTTTTTCCCCGT TTGC ACGGGGAAAAATG-TC     ACTGAGGTTTGAAGT  49 24
        tolB NONE
CTM43_RS18360 3735598 .. 3735609 -  -2.2  -2.52896   TGATGTCTGAAGTTA                CTGC TCAT GCAA                 TTCTCTTAGTAAACC  39 31
        cpoB 3734776 .. 3734801 - -10.6  -3.33492   CGATTCAGGCGACAA         GACCAGAAAT AACGCG ATTTCTGGTC          ATGCCGTAATCAACC  75 35
CTM43_RS18350 NONE
CTM43_RS18345 3734365 .. 3734378 -  -2.3  -3.10409   TACCAACTGAGCTAA               CGACC CGGT GGTGG                GTGATGACGGGATCG  43 20
CTM43_RS18340 3734275 .. 3734285 -  -3.2  -3.04144   CCTTCACGTTTAACA                 CCGA CGT TCGA                 TGTTAAAGATGGTGG  45 35
CTM43_RS18335 NONE
CTM43_RS18330 NONE
CTM43_RS18325 NONE
CTM43_RS18320 3733534 .. 3733550 - -10.8   -4.8048   TGCGCATAGCAAAAA              GGCGCC TTTAG GGCGCC              TTTTTACATTGGTGG 100 35
CTM43_RS18315 3733369 .. 3733399 - -16.3  -3.00786   GGGAAAATGCAGATA       GCAAAAAGGCGCC TTTAG GGCGCCTTTTTAC       ATTGGTGGGTCGTGC 100 28
        nadA NONE
        pnuC 3731257 .. 3731269 -  -3.3  -2.75074   GCCATCTCAACACGA                TGCAC GCC GGGCA                CGATCATCACCACCA  43 44
CTM43_RS18285 3728447 .. 3728464 - -11.3  -5.55769   GGTGAGAACAAAAAA             GCGTGGA AATC TCCACGC              TTTTTTTATGACCTG 100 58
CTM43_RS18245 3720249 .. 3720273 - -19.3  -2.86391   AGGAGGGAAATAGCA          CAGCGCCCGGT TAA ACCGGGCGCCG          GGAAATCAGTGATTT 100 31
CTM43_RS18240 NONE
CTM43_RS18235 NONE
        modC 3717553 .. 3717564 -  -2.2  -3.06696   GCCCGCGCCAACATA                GTCA TCGG CGAC                 AATGAGTCCACGAGC  41 74
CTM43_RS18220 3715530 .. 3715545 - -10.4  -5.86061   TCTGAGCAAAAAAAA              CCTCGC TAAG GCGAGG               TTTTTTCTTTTACCT 100 50
CTM43_RS18200 3712813 .. 3712827 -  -4.2  -3.50532   ACCTAAACTAACGAA               TTCAGG CAT CCTGTA               CAACTCTATTTTCTT  52 121
CTM43_RS18195 3712004 .. 3712030 - -14.4  -3.10641   TAACCCAGCACTCAA         GCCCTGATCCGC ACC ACGGATCGGGGC         GCTTAATTTTGGCCG  90 28
CTM43_RS18180 3709496 .. 3709511 -  -5.4  -3.75665   CCACAGGTGATTAAA              GGGTCGA TTA TCG-CCC              TGCCCTTTGTCTATT  58 416
CTM43_RS18160 NONE
CTM43_RS18155 3700824 .. 3700842 - -14.6  -4.84492   TGAACCATAATAAAA             GAGAGGGC GAT GCCCTCTC             TCAAACTGCTGACAA 100 251
CTM43_RS18145 NONE
CTM43_RS18140 3697073 .. 3697087 -  -5.7  -4.38472   GCGAAACGAAAATAA               TAGCG CGGAT CGCTA               GCGCCACCAATGGGC  72 23
CTM43_RS18135 3696201 .. 3696214 -  -5.3  -3.10057   ACATAGATACATATA               CTTGT CTAT ACAAG                CATGCGCAAGCCAGG  52 109
        hutU NONE
        hutH 3692849 .. 3692859 -  -6.8  -2.87132   TTGTTGTTGCATATA                 CAGG TGT CCTG                 ATTTTTTTATATGAC  54 110
CTM43_RS18120 3691315 .. 3691366 -  -8.7  -2.55216   CAGTATCTACAATAC CCCCAGGCCCGCG-CAAGCG--CAGC GCC GCCGGACGATTGCCGCGGGCACGGAG CCGCTTTTATGCCGG  60 122
CTM43_RS18100 NONE
        bioF NONE
        bioC NONE
        bioD 3684815 .. 3684832 -  -7.7  -3.14931   CTGATCCTTGATGAA             CCCTC-GC GCG GCAGAGGG             CCGCGCTGCCTGCAA  62 183
        uvrB 3681478 .. 3681492 - -12.8  -3.86733   AGCAAACATTAAGAA               GGCCGC AAC GCGGCC               TTTTTTCTTCTCAAA  93 126
CTM43_RS18055 3680978 .. 3680993 -  -3.2  -4.24204   GACGGATATCGAAAA              CGAGAC CGTC GTCTCT               GGCGATGCGACGTTA  60 355
        moaA NONE
        moaB NONE
        moaC NONE
CTM43_RS18010 NONE
        moaE 3673847 .. 3673861 -  -2.8  -3.14132   CTCTCTCCTGATTAA               CAAAGT TTC ACCCTG               TAAGCGTATCACACT  45 39
CTM43_RS18000 3673063 .. 3673094 -  -7.8  -2.71924   TACCGTGTCTGAAAT      CTCGCCCGGC-GGCG CTG CGCTTGCCGGGCGTT      CGGAGATGCAACCCC  58 56
CTM43_RS17980 3668572 .. 3668591 -  -3.4  -4.15565   CTCACCAGTGGAAAA            CATGCCGC AGTG GCTGCAGG             ATCTGACCTGGATAA  60 253
CTM43_RS17945 NONE
CTM43_RS17940 NONE
CTM43_RS17935 NONE
CTM43_RS17930 3657573 .. 3657596 - -18.2  -3.40403   TGGCGGGCATGAGAA          GGCCGCTGAG CGCG CTCAGCGGCC           AGTGGGTCATAGCAG 100 46
        rhlE 3655977 .. 3656007 - -13.3  -5.33026   TAATGGAAAGAAAAA      GGCCCG-CCG-CCGC GTA GCGGACAGACGGGCC      TGAGCCGGGGCGCGT 100 65
        dinG NONE
        ybiB 3652182 .. 3652206 -  -2.3  -4.19947   GAAAAGAAGCAGAAA          TAATTTATTAA TAA TCAGTAAATTA          TTAATCATTCAAAAA  57 524
CTM43_RS17890 3649685 .. 3649709 -  -7.7  -2.87132   GCGCGCCGGTACAGA          CCTGGCAGCAG CTG CCGATGCCGGG          CGCCGACAGCCCGGC  59 53
        ompX 3642237 .. 3642254 -  -9.1  -5.82316   AGCAGGCAAAAAAAA             TCCGCCC CGAG AGGCGGA              TTTTTCATATCACCG 100 47
        mntR NONE
CTM43_RS17835 3638384 .. 3638403 -   -10  -5.61596   AGCCGGACAAAAAAA            GATCGCCC CGAA AGGCGATC             CTGGCGATCGATGTG 100 65
CTM43_RS17830 NONE
CTM43_RS17825 3635986 .. 3636006 - -15.4  -5.22006   GCATGACAAGAAAAA            CGGCGGGC CTGAT GCCCGCCG            TTTTTTTATCGGCAT 100 131
CTM43_RS17810 3632238 .. 3632252 -  -5.6  -5.74122   CACCAGACAAAAAAA               CGGCAC CGC GTGTCG               CCCGGGTAAGGCGTA 100 67
CTM43_RS17790 3626599 .. 3626609 -  -8.2  -4.56775   ATCGCCCTGGAAAAA                 GGCG CCT CGCC                 GGGGGATTTCCCGCG  83 125
CTM43_RS17755 NONE
        gsiA NONE
        gsiB 3614152 .. 3614194 - -11.5  -3.59946   CGCTTAATCACATAA TTCA-GCATCGCTCCCTCCCA TTC CGGGAGAGAG-GACGCATGAA GATGAACATGATCAC  83 37
        gsiC NONE
        gsiD 3611847 .. 3611858 -  -5.8  -3.53444   CCATTGTTGCTGAAA                CAGC CGAT GCTG                 GCGGCCTCAACATCG  59 493
        bssR 3608050 .. 3608069 -   -10  -3.07501   ACATAACCTTTAACA            GGGGAAGC GTTC ACTTCCCC             TGGGTTTCAGCCGAT  69 40
CTM43_RS17710 3606589 .. 3606615 -   -10  -2.57132   GGGCCTGGTGAGAAC         GCCACCGGAGCA GCG CGACCCGGCGGC         CATCGCCGCGGGGAT  62 269
CTM43_RS17700 3602678 .. 3602718 - -13.2  -3.06796   CCCTACTGTATTGAA GCGTCG-CTGCCCGCGCCC CGCA GGGCGCGGGCAGGCATCAG  GAGAACCAGCTGCCA  86 22
CTM43_RS17680 3599631 .. 3599652 - -15.9  -3.21276   GTTCGCCTGATAAGA           CCCGGATGC GAGC GCATCCGGG            TTGAAAACAACTACC 100 36
CTM43_RS17665 3596773 .. 3596810 -  -6.3  -4.56113   AACAGATCAAAGAAA   GTGGCCCATGGCG-TTTA AGG TAAGTCGCTATGGGCCAA   GTGGCGACAACGGTT  77 180
CTM43_RS17650 3595084 .. 3595098 -  -4.4  -4.31433   CAGGGCTACAATAAA               TTTTTT GCG AAAAAA               ACCGTCACAGGCAGA  65 249
CTM43_RS17640 3592296 .. 3592328 -  -6.9  -3.85698   TCTCCGGTTGATAAA     CG-CGGCGCGCCAG CCAATT CCACCGCGCCGTCG      GGCCAGTATACGGGT  66 444
CTM43_RS17630 NONE
CTM43_RS17625 3591185 .. 3591202 - -10.5  -4.08216   GCACCTCTGCGAAAA             GACCCGC TCTG GCGGGCC              TCAGCTATCGAACAC  85 104
CTM43_RS17620 3590231 .. 3590262 -  -2.2  -3.87608   CTTACGCAAAAAAAG      CGCCGCATACCA TGGCCGTC TTGCATCCGGCG       GTTAGCCGCCTATTT  52 27
CTM43_RS17615 3589655 .. 3589679 - -11.4  -3.06009   TAAAAGCGGGTAATA          CGCAGCCGCT GCGGT AGTGGCTGCG          CTAATTTTAGGCAGG  78 42
        potF 3588135 .. 3588146 -  -5.8  -3.01791   ACTTCGTGCTTAACA                GTGC ATTT GCAC                 CATCCTGGTGCTTCT  53 114
        potG NONE
        potH NONE
        potI 3585080 .. 3585100 - -18.3  -4.25104   TGTCTTCCATGAAAA            CGGCGCCAC AGG GTGGCGCCG            ACCGGAGGCTGCTGT 100 57
CTM43_RS17590 3584547 .. 3584557 -    -4  -3.41878   GTGCGCAATGCATAA                 TTGA CCT TCAA                 AAATCCAGGGGCGGG  50 54
        rlmC NONE
CTM43_RS17580 NONE
CTM43_RS17575 3580889 .. 3580902 -  -3.7  -3.67175   ATGGCTGAAAACTAA               CCCGC AGCT GGGGG                CAGCCACGCCGAAAG  54 276
CTM43_RS17535 NONE
CTM43_RS17530 3573356 .. 3573367 -  -2.2  -3.27923   GTGGAATATCAGCAA                CGGCG AAC CGC-G                CACCTTGCGGAGCAT  44 317
CTM43_RS17505 3567262 .. 3567302 -  -5.9   -4.8622   TTCTTTAAGGAAAAA  TTCTTCACCCCGGTGGCTG AGG CCGCCACCAGCGGGCTGAA  ATTTACTAAACTGCA  81 487
CTM43_RS17475 3560894 .. 3560908 -  -6.4  -3.65902   GTGATTCTATCGAAA               CCCGTT GGC AACAGG               ACACCCATTTTTCTC  63 106
        macA NONE
        macB 3557750 .. 3557770 - -11.2  -4.63486   ATCCTGCTAATAAAA            TGCCAGTC CTTCT GACTGGCA            TTTTTATTTCTCGCC 100 45
CTM43_RS17455 NONE
        clpA 3554501 .. 3554515 - -12.8  -6.15828   GTCAGCAAAAAAAAA               CCGGCC CCT GGCCGG               TTTTTTACATTGAAG 100 49
CTM43_RS17420 3547413 .. 3547449 - -15.2  -4.07568   TGCCTGCTGCTAAAA   CGGACAACAGCGCCGGG TCTC CCCGGCACTGTTG-CTG    TATGGATTAACAGGA 100 79
        ftsK 3543052 .. 3543063 -  -7.2  -2.79878   TGCACTCATTCAAAG                GGCG GCGG CGCC                 AGCACTTCGCGGTTA  57 4
        lolA NONE
CTM43_RS17405 3540900 .. 3540920 -  -9.7  -5.47846   AATTAAAAAAGAAAA            GTGGCCGCA GAC TACGACCAC            GGAAATAGTGTAATA 100 61
CTM43_RS17400 3539536 .. 3539549 -  -9.5  -5.41746   AAGGGCGTAAAAAAA               GCGCC CGCA GGCGC                TTTTAAAAGAAGGAG 100 49
CTM43_RS17395 NONE
        dmsB NONE
CTM43_RS17385 3535396 .. 3535439 -  -8.1  -2.64933   CATCTATCGACAGCA CGTTTTCATCATGCCGGTG GTTAGG CACCGGCATGATGGAGGTG GTTAACTGGCGACAG  58 27
CTM43_RS17380 3535236 .. 3535247 -  -5.8  -2.53759   AACATTGTCAATCCA                CCTG AAAT CAGG                 CGTGACGCGGTTTTG  50 61
CTM43_RS17375 3533990 .. 3534009 -   -15  -2.66634   GATTGCAGCAGATGA            CGCGCAGC ATGC GCTGCGCG             TTGCAGGGTCAGGCG  90 34
CTM43_RS17350 3526763 .. 3526781 -  -2.4  -4.67982   CTTGACGTAATAAAA             CCGACA TATTTGC TGTCAG             GTAAGCCGTTTCGCC  67 22
CTM43_RS17345 3525460 .. 3525480 - -11.8  -5.33331   CAAACAGAATAAAAA            CCCCGCAG ACAGG CCGCGGGG            AGGAAGAAAGAAACA 100 46
        aroA 3524101 .. 3524125 - -16.5  -2.90075   TTTTGCGCAATTATA          GCGGGCTGACA GGA TATCAGCCCGC          GGGATGACAAAGTTT 100 44
CTM43_RS17335 3523217 .. 3523241 -  -4.2  -2.87132   GGGTTGTTTCACATA         CCCGCTGACCA TCCA TTGCC-GCGGG          GTACTGCTATAATTC  45 70
CTM43_RS17330 3521377 .. 3521394 - -14.1  -3.96449   TAACAGCTTAAACAA             GGGCGGC CGTA GCCGCCC              TTTGTGCTTGATTAC 100 110
        ihfB 3520990 .. 3521003 -  -8.1  -5.60993   GCGGGCACAAAAAAA               GCACC CGAA GGTGC                TTTCTTTATCGTCAG 100 62
CTM43_RS17320 NONE
        msbA NONE
CTM43_RS17310 3515812 .. 3515824 -  -7.7  -3.05384   CGGCGCGTCAGTTAA                CGTTG CGC CAACG                TCGCTAAGTCCGCAA  60 9
CTM43_RS17305 3514514 .. 3514535 -  -4.3   -2.5919   TATCACAGGAAGGCA           GGCGCCG GGATCAAT CGGCGTC            GATTTCCCACCCCTG  44 14
CTM43_RS17300 3514269 .. 3514283 -  -2.8  -2.96249   GCGCAGGAATAATGA               CCACGA AAC TCATGA               GTGACTCTCTTCTAG  43 20
CTM43_RS17295 3513495 .. 3513516 -  -5.7  -4.97888   AAAAAAAGCGAAAAA           CCGACGGGG ATAT CCCCTCCAG            CAAGGAGGGGACAGA  81 44
CTM43_RS17290 3512149 .. 3512164 -  -4.6  -3.66908   GGCGGCGAAAACGAA              CCCCGT CAGC ACGGCG               GAAGCCGGGGCGAGA  56 365
        cmoM NONE
        mukF NONE
        mukE NONE
        mukB 3504319 .. 3504337 - -10.3   -4.8048   GCTGGATAGCAAAAA             GGGCAAC TTAAC GTTGCCC             TTTTCAGCGCTTACC 100 62
CTM43_RS17260 3502312 .. 3502337 - -14.7   -3.1582   TCACCCCAGGAAAAT         CGGGCGCTGCA GAGG TGCAGCGCCCT          TTTTTACCCAGTGCT  91 71
CTM43_RS17255 NONE
CTM43_RS17250 3500826 .. 3500841 - -11.8  -5.38054   CGGTATAAAGAAAAA              GGCCGC GAAT GCGGCC               TTTTTTATGTGTTCG 100 52
        dpaL NONE
CTM43_RS17220 NONE
CTM43_RS17215 NONE
CTM43_RS17210 3490294 .. 3490322 - -15.3  -4.20888   GCAAGCTAAAAAACA        TGGCCCGACGGCA TTC TGCTATCGGGCCA        ATCAATATCACTCCT 100 33
CTM43_RS17200 3485894 .. 3485919 -    -9  -3.72893   GATCGGGTGATGAAA         CGCGGCG-ACA GCGAG CGTGCGCCGCG         TTTGTTTAGTCATGG  74 249
CTM43_RS17170 3480384 .. 3480413 -  -7.1  -4.68724   TGAGGGAATATAAAA       CAACCAGGGCC GGAAATAA AGCCCTGGGTG        GGATTCAGAGGAGGA  83 46
CTM43_RS17165 3479653 .. 3479664 -  -2.2  -5.27335   TCCGTTAAAGAAAAA                CGCGG TTG CCG-G                AGATGGCACTATTCT  80 83
        rlmL NONE
CTM43_RS17150 NONE
        pqiA NONE
CTM43_RS17140 NONE
        pqiC 3470967 .. 3470996 - -19.3  -5.75945   ACCTGGCAAAAAAAA       TGCCGCGCGGCCC AGGT GAACCGCGCGGCA        GATCATTATGATGAA 100 47
CTM43_RS17130 3470552 .. 3470580 - -10.9  -3.16914   AGTAGCGATTAAAAG        GCGAAGCCCCCGC TAT GCGGAGGCTTCTT        TTTTAAAGAGACAGT  76 42
        matP 3467433 .. 3467446 -  -9.5  -5.66684   TAACCGATAAAAAAA               CCCGC TTCG GCGGG                TTTTTTTTATGCCCT 100 124
CTM43_RS17095 3464392 .. 3464417 -  -5.4  -3.57615   TGAACAGCCTGCAAA         GC-CGGATCCA TCATC TGGAACCGCGC         GCGGACAGTAAGGAA  55 144
CTM43_RS17080 3459730 .. 3459746 -  -5.2  -3.54424   GCCGATCGCCTGAAA              TAATCG AGCCG CGATTA              CGGCTTCCTGGCCAC  56 23
CTM43_RS17070 3458679 .. 3458703 - -12.9   -4.4078   CCTTCGCAACTAAAA          CAAAACCCCGC CAG GCGGGGTTTTT          TGTTATTTTGCTAAT 100 28
CTM43_RS17055 NONE
CTM43_RS17050 3455129 .. 3455152 -  -4.6  -3.92373   CAGCGTACTGAGAAA          TGGTGACAGGT TGT ACCTG-CACAA          TCGGAATCTGATTTT  59 419
CTM43_RS17030 3451882 .. 3451906 - -13.6  -3.80114   CAGTAATGTAGTAAA          TGGCCCGAGA ATAAA CCTCGGGCCA          TTTTTCTATAAAAGT  95 357
CTM43_RS17010 3447532 .. 3447555 -   -11  -4.28018   AACAGGCGACTAAAA          TCGCCGGCTT GCCG AAGCCGGTGA           AGTGCATCTAATAGA  87 33
CTM43_RS16995 3444517 .. 3444528 -    -3  -4.58283   CAACTGCCTTAAAAA                CAAA CAAT TTTG                 TGTTATTCGTCTGAA  65 64
CTM43_RS16990 3444325 .. 3444352 - -14.3  -3.61244   GACCGGACAAAGCAA        GAAGGGGTTAC ATTTCG GTAACCCCTTC         TTTTATATGGCGGAA  93 33
CTM43_RS16975 3442833 .. 3442866 -  -3.2  -4.24075   AGCGAGGAAGAGAAA     GCCAGCCAGCAGA GTATGCTGA TCTGCTG-CTCGC     GCGCCAAAGGCGGCC  60 230
CTM43_RS16945 3434738 .. 3434758 -  -6.1  -3.58343   CTGATTATGCCGAAA            CTGCTGAAA ACC TTCCCGCAG            CTGCAGCGGGTGAAG  58 325
CTM43_RS16920 3428894 .. 3428911 -  -5.5  -3.56643   GCGACATCCGGGAAA             TGGCTGG GCTC CCAGCAA              AAACGTCGGCCAGGC  56 102
CTM43_RS16915 NONE
CTM43_RS16910 3427195 .. 3427222 - -17.8  -4.28774   TTACCGAAGCCAAAA        CGAAAGCAGGCC TGCG GGCCTGCCTTCG         TTCAGTTTATGCCTC 100 46
CTM43_RS16900 3426504 .. 3426518 -  -5.6  -3.35679   CCGCGGTATCGATAA               GCGGCA CCG TGCGGC               GGGCGCTACTCCGGT  54 31
CTM43_RS16885 3423725 .. 3423740 - -10.4  -5.41746   AACCTGCTAAAAAAA              CCCGGA GTAC TCCGGG               TTTTTTTCGTTATTT 100 35
CTM43_RS16870 3422143 .. 3422162 - -16.4  -5.76633   CGACAGATAAAAAAA            CCGCCGGC AGAT GCCGGCGG             CGAGGGCGATGCGGT 100 91
CTM43_RS16865 3421009 .. 3421043 -    -7  -4.37886   CCACCCGGCATAAAA     GCGACGCCGTGC CTAGAGCCATC GCCCGGCGGCGC     TGCGCTTGCGCGGGC  76 109
        rutR 3413946 .. 3413963 - -12.7  -3.33696   GCTGTGTTTAATTAA             GGCTCCC GGAC GGGAGCC              TTTTTTATGGGAGCA  87 438
        putP 3407870 .. 3407886 - -15.1  -5.11063   ACCAGGCAATAAAAA              GCCCGCC AGC GGCGGGC              TCGTGAGCATTAGAT 100 45
CTM43_RS16805 3407308 .. 3407335 - -17.8  -4.07568   GCTGGTGCTGTAAAA        CAAACGGCGGGG CTGC CCCCGCCGTTTA         CTCAGAACTGCACGC 100 27
CTM43_RS16795 3405006 .. 3405035 -    -5  -2.57211   AGTGTCGCTTATAAG      CTCGC-AGC-GCCC GGTC AGGCAGCCCGCGAG       GCAGTGGTATTATTC  46 10
        efeO NONE
        efeB 3402525 .. 3402549 - -13.6  -4.62069   AAAAACAGCAGAAAA         CG-CCCTGCCC TTAC GGGCAGGGTCG          GTATCAGGCCTGCAG 100 29
        phoH 3401223 .. 3401240 - -14.1  -4.76802   CCCAAAAACAACAAA             GCCCGGG CTAG CCCGGGC              CTTACTCACAGTATG 100 45
CTM43_RS16760 3397716 .. 3397728 -  -7.7  -2.92667   TCAAGCGGCAAACGA                CTCAC ACA GTGAG                CAATCTTTCACGAGC  60 121
        ghrA 3394255 .. 3394270 - -11.8  -4.77438   ATTGATTAGCAAAAA              CCCCGC CGTG GCGGGG               TTCTCTCGTCTTAAT 100 36
CTM43_RS16735 NONE
CTM43_RS16730 3392768 .. 3392806 -  -7.5  -2.74523   CGATTGCGAAGAGTA  TGTTCATGGCGCGTATCC TAGC AGATACGCGCCG-GAAGA   ATGCGATCTAAAACA  56 97
CTM43_RS16725 3392253 .. 3392271 -   -11  -5.84432   GAGAAGATAAAAAAA             CAGGACCC GTA AGGTCCTG             TTTTTTAGTCGTCCC 100 46
CTM43_RS16720 3391618 .. 3391630 -  -3.3  -2.71144   TATTCTGTTGAATCA                GGGGT ATG ACGCC                AGCAGGCGGCGATAG  42 10
CTM43_RS16715 3390891 .. 3390916 -  -7.5  -4.27474   AAACCGATGAACAAA         CCGGCCAAAAC CCCA GCCTCGGCCAG          CTAACCACTAGCCTG  73 64
        mdoG NONE
        mdoH 3385396 .. 3385415 - -12.2  -5.71712   TTTCAGATAAAAAAA            TACCGGCA TCGC TGCCGGTA             TTTTCCTTAACGTAC 100 44
CTM43_RS16690 3384662 .. 3384688 -  -2.3  -3.57418   CATTCAGTAAATTAA        CGTCGAGAGGGGC TCT GTCCCT-T-GACG        CCGTGCGTACCGCCT  47 477
CTM43_RS16675 3383232 .. 3383248 -  -2.1  -4.07687   ATCGTCGCTTCAAAA              CCCGCCC CGA AGGCATG              CCCTCCCGCTACTGA  55 34
CTM43_RS16665 3380937 .. 3380954 - -12.7  -4.41348   CGTTGGGTAAAGAAA             CGGCCTC TGCT GAGGCCG              TTAGTGATTGAGAGC 100 144
CTM43_RS16620 NONE
CTM43_RS16615 NONE
CTM43_RS16610 3373238 .. 3373255 -  -8.3  -4.25848   AACCCTGGAGTAAAA             CGCCCGC AAAT GCGGTCG              CTGGAAAGTGGCGAT  77 89
        murJ 3371624 .. 3371650 - -23.8   -5.9873   GCATCATAAAAAAAA         CCCCGCTTCGCC TGA GGCGAAGCGGGG         TTTTTCTACCCTCAC 100 47
CTM43_RS16595 3369338 .. 3369352 - -12.8   -5.7946   TGCTTAATAAAAAAA               CCGGCC TTT GGCCGG               TTTTTTTATGCGCTT 100 31
CTM43_RS16585 3365561 .. 3365574 -  -3.1  -3.29613   AAAGGTGAAAGTCAA               CTTGC TATA ACAAG                GTTAGCAATGGAATA  47 69
        rluC 3364407 .. 3364426 - -13.6  -5.81412   CTGAGGCAAAAAAAA            CGGCGGAA CTGA TTCCGCCG             TTGCGCTTATTTGCT 100 32
        yceD NONE
CTM43_RS16565 3362939 .. 3362957 -    -3  -3.66178   GCCTGCAACGGGAAA             TCCTGCGA GTA TCGCGTGA             TTACTTAGCGATAAC  51 26
        plsX NONE
CTM43_RS16555 NONE
        fabD NONE
        fabG 3358902 .. 3358921 -  -7.8  -4.36914   TCTTTTCGCACAAAA            CCGCACAG AGAA CCGTGCGA             AGTGCGCGGTTCCTG  78 62
CTM43_RS16540 3358476 .. 3358502 - -13.1   -5.0432   AATAAAAAGATAAAA        CT-CAGGCGGTC GAAT GACCGCCTGGAG         ATGTTCACTTACGCC 100 34
CTM43_RS16535 3357132 .. 3357148 - -10.8   -5.4756   AAGCTGAATAAAAAA              GGCCCG ACGAA CGGGCC              TTTTGTTAAAGCAGT 100 57
CTM43_RS16530 NONE
        yceG NONE
CTM43_RS16520 NONE
CTM43_RS16515 3353582 .. 3353603 -  -4.3  -3.05531   GACTAAAAACATAAT           GTCTCACTC AGAG GTGGGAGAC            GGGTAAAACCGTCCC  47 11
CTM43_RS16510 3352708 .. 3352737 - -10.7   -5.0133   GATGTTGCTAAAAAA       CCTTCACCGCCAC TTTT GTGGCGGTGAACT        TTACTCGCTTTGGCT 100 72
CTM43_RS16505 3351014 .. 3351031 - -12.7  -5.26316   TTAGCGCATAAAAAA             GGCAGCC AGTT GGCTGCC              TTAGTCTCCCCGATA 100 48
CTM43_RS16500 NONE
CTM43_RS16495 NONE
        lpoB NONE
CTM43_RS16485 NONE
CTM43_RS16480 3347541 .. 3347554 -  -5.9   -3.9093   CTCACCAGACAACAA               CGCCC CGTA GAGCG                TTACGCGGACTTCGC  64 26
CTM43_RS16475 3346931 .. 3346954 - -10.3  -5.24989   GTAGACATGAAAAAA          CCCGCGT-GG TGAAC CCGACGCGGG          TTTGGGAACAAGGGA 100 48
CTM43_RS16470 3345381 .. 3345416 - -19.8  -3.40403   GCGGTTTCAGCAGAA    GAGCCCGGAGGCGCCCT CAG AGCGCGCCTCCGGG-TC    GCGACAGCGATTAGT 100 36
CTM43_RS16465 3344644 .. 3344670 - -10.1  -5.60993   CTTCTGATAAAAAAA         GCCCCTCAGCC TGAGC GATTGAGGGGC         TAATCACTACACAAA 100 48
CTM43_RS16450 3340949 .. 3340978 - -19.5  -4.37886   TTACGCTGCACAAAA       CAAAAAACCCGCC TGAT GGCGGGTTTTTTG        TTGGCAAGGGTCAAA 100 107
        lolC NONE
        lolD 3334147 .. 3334170 -  -2.5  -3.28984   CAATGCAATCAGTAA          CGA-TAACGG AGACG CCATTACTCG          GCCCCCATCAGGGTC  45 19
        lolE NONE
CTM43_RS16420 NONE
CTM43_RS16415 NONE
CTM43_RS16410 3330660 .. 3330705 -  -7.7  -4.06687   AGGCGCTATAAATAA GCCACGGCGCAGGCGGCGGATCA GCGT TGA-CCGCCGTC-GCGC--TGGC CTTTACCCTTCTCTT  73 0
        pdxA NONE
CTM43_RS16390 3325782 .. 3325792 -  -2.6  -3.60971   AGGGTAACTCTTAAA                 TTAA GAT TTAA                 CAGAGATAACGACGC  49 92
CTM43_RS16385 NONE
CTM43_RS16380 NONE
        rpiB NONE
         tal NONE
         tkt 3320839 .. 3320870 - -13.1  -2.92642   ATCATTACTCAGAGA      GCGTATCGCCCGAC TTCGG GCCGGGCGATA-GC      GGTGGGGATTTACAG  83 35
CTM43_RS16360 NONE
CTM43_RS16355 3317005 .. 3317016 -  -2.2  -4.15565   TGCATCATCGGAAAA                TCCC CATC AGGA                 TGATTTCCCAGGCCA  59 302
        pepT 3310545 .. 3310557 -  -6.2  -3.41745   GCCGGATAAGACGAA                GCCG CCATC CGGC                ATCTTGTCCGACACG  57 66
CTM43_RS16300 NONE
CTM43_RS16295 3305390 .. 3305401 -  -7.2  -3.53811   CTGACCCGCGGCAAA                CGCG TGGA CGCG                 GAAGGGATGAAGCAG  60 203
CTM43_RS16265 3299630 .. 3299649 - -13.6   -5.3321   AACTAATAATAAAAA            CGGGAACC ACCA GGTTCCCG             TTCTGACATAATCTG 100 50
CTM43_RS16250 3294698 .. 3294713 -  -4.8  -2.73483   ATTGCACTTCAATTA              TTGATA AACG TATCAA               TAATAACATTTTGCA  46 308
CTM43_RS16245 3293325 .. 3293358 -  -2.7  -4.56791   AGGTAAAAATAGAAA     CA-TGATTTCATTATA AAT CACAATAAAATCAATG     TGTTATTAAATACTA  65 182
CTM43_RS16240 NONE
CTM43_RS16235 3292079 .. 3292095 - -13.7  -5.95449   AAAGAAAATAAAAAA              GCCTCGG AAT CCGAGGC              TTGCATTGGAACAAG 100 69
CTM43_RS16230 3291621 .. 3291642 - -17.3  -5.47399   TGAAGGCGAAAAAAA           GCGGGAGCC CATC GGCTCCCGC            TTTTACTTAATCCAC 100 49
CTM43_RS16210 3289477 .. 3289490 -  -9.5  -3.01712   TGTGCGTCCCGAAGA               GGCGC TGCG GCGCC                ACCCCGCCTCCACCC  62 87
CTM43_RS16195 3287123 .. 3287147 - -18.7  -4.33182   GGAGTCAGAAAATAA          CTGCGAGTCTG TGA CAGACTCGCAG          GAGATACTTTCACTT 100 63
CTM43_RS16190 NONE
CTM43_RS16185 NONE
CTM43_RS16180 NONE
CTM43_RS16175 NONE
        cydB 3282493 .. 3282511 -    -6  -4.08945   ACGATTTTTTTAAAA             TCGCCA CCGAGTT TGGCGA             TATTGGCGCGAGGAT  66 208
CTM43_RS16160 NONE
CTM43_RS16155 3280654 .. 3280674 -  -5.5   -2.8541   ATCGATAAGAAACAT            TCGATAGCT AAA AACTATCAA            CATATAATTTATTGA  49 314
CTM43_RS16150 3279575 .. 3279593 - -13.1  -3.41416   GCAAAATAAGCAATA             GCCGCCG GTAAA CGGCGGC             ATTTTTCCATGCCGC  87 311
CTM43_RS16140 3276815 .. 3276838 -    -8  -3.18264   CCCGGGATTGACGAA          GCTGGGGCGC ACCA GTGCGCCAGC           GAGATCTACACCCAG  59 236
CTM43_RS16125 3272594 .. 3272622 -   -16   -3.1541   ATTGAGAAGAAAGCA        CGGCGAGGGTGT GAAAA ACGCCCTCGCCG        CAGAGGATCAGTAGG 100 33
CTM43_RS16115 3271034 .. 3271046 -  -3.3  -3.57144   GTCGGGATTTTGAAA                GCGCA GCC TGTGC                GGGAAGGTTAATAGA  50 33
        leuE 3270290 .. 3270322 - -11.2  -3.31208   GGGCAGAATAAGAGA      CGGCGGGCCGGTCA GCGGG TAACCGGCCCGTGG      GGATCAGGACTGCAG  78 29
CTM43_RS16105 3269904 .. 3269923 - -13.6  -3.18832   TAAGCCGATAAGACA            GGGCGAAC CGCG GTTCGCCC             GTTGACGCTTAATCC  88 34
CTM43_RS16080 3267727 .. 3267770 -   -18  -2.74144   CGCCCATCGCGAAAC GGGCCTGCGGCTGGCGGCGC TGGC GCAACGCCAGCCGCTGACGC TGCTGTACGCTGCGA  89 98
CTM43_RS16065 3266138 .. 3266157 -   -15  -2.74192   CACCCCTGAAGATGA            CCGGCAGC GCCC GCTGCCGG             TGGAATTATTGTGCC  90 31
CTM43_RS16055 3263876 .. 3263888 -  -4.8  -3.67976   TTTATGAACTGGAAA                TCGC TGCTG GCGA                TTGCGGTCGGGGTGT  56 191
CTM43_RS16030 NONE
        umuC 3258813 .. 3258843 -  -6.1  -4.08216   TGATCGCCCGTAAAA      TCGGCG-AGGCGAC GCTG GTCACCTGCGCCAC       CCCGGGCTATCTTCA  66 435
CTM43_RS16015 3256936 .. 3256955 -  -4.2  -3.85817   ACCGCTGCTGATAAA            TCTGCAGGG AGT CCCGGC-GA            CCGCCCTCTCCGGCC  57 495
CTM43_RS16005 3255099 .. 3255118 -  -3.4  -5.00616   CTGGCGCGGAAAAAA            TCGTGGCT CGTC AGCCTCGG             GCAGTCTTATCGATA  73 61
CTM43_RS16000 3254429 .. 3254440 -  -4.4  -4.37886   CGACGCCGGAGAAAA                TGGA AGCC TCCA                 TTGTCGCGGCCCTCA  65 170
CTM43_RS15990 3253222 .. 3253253 -  -7.2  -2.72434   AGCTTAATTAAATAC      TCAGCCAGTGAGTC GAGT GACTTGCTGGCTGT       TTTCCTCAGACACAA  56 31
CTM43_RS15975 3248690 .. 3248716 - -15.3  -2.99273   TGCACCACCATAAAG         CAAAACAGGGC GCAAG GCCCTGTTTTG         ATGCATGAAGCGCAC 100 56
CTM43_RS15970 3247747 .. 3247777 -   -17   -3.1916   GAAAAAACGCTAATA       GCAAAAGCCCCGTT GGT AACGGGGCTTTTGT       TTTTCTTTGCCGTGA 100 49
        msrB NONE
CTM43_RS15950 3244627 .. 3244638 -  -7.2   -3.3039   CAAAAAGTAAGCGAA                GCGG CTGA CCGC                 CGGACGCGGTCATTC  62 103
CTM43_RS15920 3238286 .. 3238298 -  -6.2  -3.41878   CCGGGTAAGGCATAA                GCCG CCACC CGGC                ATAACACACGCGGAC  57 41
CTM43_RS15910 3237434 .. 3237446 -  -3.3  -4.58283   CAAGCTGGCGAAAAA                CGGCT CTT ACCCG                TCCGGGCATACCTCT  69 201
        selD NONE
        topB 3233691 .. 3233726 - -18.4  -2.57564   TGACTGGCGGAGAAG    CGGTGGCCGCG-GGATA ACG CATCCTCGCGACCACCG    GCGGGTTACTGCGGC 100 31
CTM43_RS15890 3232376 .. 3232414 -  -2.5  -4.70879   TGGAAAGCGGAAAAA  GTGGATGCCC-GCCTGCAT CAC AT-CATGCTGGATATCCAC  CACGCTTGCGTGCAG  66 183
CTM43_RS15875 3229788 .. 3229817 -  -5.6  -3.33737   CAGCAACCCGCACAA       TCCGGTGGCCCGC GGAGA GCGCGGC-CCGGA       AAGCAGTCAGTAACT  54 90
CTM43_RS15830 NONE
CTM43_RS15825 NONE
        astD NONE
        astB NONE
        astE 3215689 .. 3215713 - -13.5  -4.42062   GACGCGCGAAATAAA          GCAGGCCGCCC GGC GGACGGCTTGC          CCTCAGGATAATTTC 100 28
CTM43_RS15805 3214817 .. 3214865 - -15.4   -5.5112   GCCACCAATAAAAAA CCGCCGGCCCTGCCCAAC GCCTGATGGCATT ATTGGGCAAGACCGGCGG TCTTGATTCAGTGCG 100 46
        osmE 3212337 .. 3212355 -   -16  -5.28778   ATGACTCACAAAAAA             GCCCGACC AGT GGTCGGGC             TTACGTAGAAGTCAG 100 56
CTM43_RS15785 3211715 .. 3211771 - -10.2  -4.67048   TGACGGGAAAATAAA CTCATTATTTTTTGACGTCCGGCAAC AGTCA GCCGCCAGGCGTCAAAATACACCGAG TTTTAAAAGTTAAAA 100 41
CTM43_RS15780 NONE
CTM43_RS15775 NONE
        chbR 3209004 .. 3209025 -  -7.1  -3.86015   GATTTTCGGTATAAA           CCTGGCGGC GAAC GCCGCGCGG            GTTTAATTAATACTG  69 28
CTM43_RS15765 NONE
CTM43_RS15760 3206749 .. 3206769 - -18.3  -4.72272   CCGGCGTAGTAAAAA            GCCCGGCAC GCT GTGCCGGGC            TTGATTCACTTTCCC 100 56
        cedA 3203999 .. 3204016 - -11.3  -5.71983   GCAAGCACAAAAAAA             CCGCTGA TCAT TCAGCGG              TTTTTTTATTTCTGC 100 48
CTM43_RS15725 3199441 .. 3199462 - -17.3  -3.96068   CCAGCGGAATAAGAA           GGTGCCCGG CTTG CCGGGCACC            TGACTTACAGAAAGC 100 30
        ompW 3193768 .. 3193786 - -10.3  -3.51076   TGACGAGACAATGAA             CTGGCCA TCCGT TGGCCAG             TTTACAGAAGAATTT  77 39
CTM43_RS15665 3187672 .. 3187693 -  -5.2  -4.11216   CCGCCATCGTCAAAA           TCATCGAA CGCCAC CTCGATGA            GCCGCAGACCATGCT  66 99
CTM43_RS15635 NONE
CTM43_RS15630 3179399 .. 3179441 -  -8.2  -3.04398   CGTCGGGGCGAAAAC GCGGGGTACCGGACGGCGCA TGA TGCACCGCCCGGCAGATAGC CTTAGAGAAACGGCC  63 27
        gcvA NONE
        rluB 3176284 .. 3176317 - -15.4  -2.60392   TAGCGCGGAAGGAAG     TACGCGTTCCGGCG GCAAGT CACCGGAACGCATA      ACATTAACCGTTAGT  95 29
CTM43_RS15600 NONE
        sohB 3173576 .. 3173606 - -14.9  -4.23723   TAAGACCAGTGAAAA      CAATAACGCGAGGC CCAG GCCTCGCGTTAT-G       TTATTTACATCAGCG 100 30
        topA 3170229 .. 3170264 - -14.9  -3.11218   GCAAAGAGGGGAAGA    CGACACGGCAGAGAAA TGCAC TCTCTCTGCCG-GTCG    CCTGAGCAGGAAAAG  91 69
CTM43_RS15580 3168949 .. 3168972 - -12.5  -3.14468   GTCCATCATAGTTAA          TGGCACTCC TCGCAG GGAGTGCCA           TTATTATTTTCAGGG  82 41
CTM43_RS15575 3168409 .. 3168440 -  -3.1  -5.67967   ACGAGGACAAAAAAA     GAGCTAAT--CGGCC AGCG GGCAGTGATTAGCTC      TGGTGAGTGATTTCA  85 160
CTM43_RS15570 NONE
        acnA 3165489 .. 3165507 -   -16   -4.8143   GGAATAACCGAAAAA             GGGCCAGC GAT GCTGGCCC             TTTGTTTCACAGCAT 100 32
CTM43_RS15555 3163786 .. 3163798 -  -2.7  -3.27725   CCAGTAAGAAAATGA                GTAAA TAT TTCAC                ATGACTTCCCGTTAT  47 161
CTM43_RS15550 NONE
        lapB 3162172 .. 3162189 -  -3.3  -4.05875   CGCAAAAAAGGTAAA             CGGGCAG CATT CTACCTG              TGAAGCGAACAAAAT  58 150
CTM43_RS15540 NONE
        yciH 3160994 .. 3161015 - -15.1   -3.1634   CGTTAAATCATTCAA           GGCCGCGGC ATTT ACCGCGGCC            TTGTTATTTCAACCA 100 69
CTM43_RS15495 3152368 .. 3152394 -   -10  -2.57564   GCACCCGGTCAGAAG         CAGCGTCTCGGC CTC GCCAGGGCGCTG         ATCCTGCGCCCGAAG  62 385
CTM43_RS15460 3144869 .. 3144891 -  -6.2  -4.91109   GGTTCACGATAAAAA           CCTGCTGCTG CTC CACCACCAGG           GTCACTACCAGCTGC  86 366
CTM43_RS15450 NONE
CTM43_RS15445 3140082 .. 3140111 - -13.6  -4.77036   CTCCAGCAGGAAAAA       CGCCTGCTGCAG CGGAGT CTGGAGCAGGCG        AAGTATCATCAGAAG 100 100
        pspA NONE
        pspB NONE
        pspC NONE
        pspD NONE
CTM43_RS15415 NONE
CTM43_RS15410 3134694 .. 3134706 -  -3.3  -4.08216   TGATGGGGCGTAAAA                CGCTG ATC CAGCC                GCTGCTCGATGCCGG  58 260
CTM43_RS15400 3132495 .. 3132516 - -15.9  -3.55444   CGGTCAGTGGTTAAA           TCACCGGCC AGGC GGCCGGTGA            GTCTTGGGTCAGGCG 100 34
        tyrR 3130741 .. 3130754 -  -2.3  -5.25656   AAAAGGATTAAAAAA               CCAGT ATAT ACAGG                TTTGGCCCGCTTTGC  76 82
CTM43_RS15390 3129592 .. 3129624 -  -9.7  -3.24161   GAAAGCCTGATAACA      GATTGCCCGGGCGCG TCG CGCTCGCGGACATTC      GATCTGCCCAGCCCT  70 58
CTM43_RS15380 3128023 .. 3128034 -  -5.8  -3.45839   AGGCTTAAAGATGAA                GCAC GCCG GTGC                 TGAACCGCAGCGCCG  59 3
CTM43_RS15370 3125435 .. 3125456 -   -13  -4.24413   CTTATTAATAAATAA           CTGGCGCG GCAAGA CGCGCCAG            CTCGGGGATCAGCGA 100 75
CTM43_RS15355 3121742 .. 3121772 - -17.7  -3.21276   TTCTCTCCGACAAGA      CAAAGCCGCC-CGC AGGC GCGTGGCGGCTTTG       GGGATGTCTCCGGCA 100 49
CTM43_RS15350 NONE
CTM43_RS15345 3119519 .. 3119544 -  -7.5  -3.15212   AACCAGCATACTGAA         CCCGTCGCC-GC AGC GCAGGCGAGGAG         ATGGATATCGAATCA  60 54
CTM43_RS15335 3119059 .. 3119084 -  -9.7  -3.53091   ACGCGGGTGGGGAAA         TTCCCCC-GGTG ATT CACCCGGGGGCA         ACGTCTGTTCCCTCA  74 38
CTM43_RS15320 NONE
CTM43_RS15315 NONE
CTM43_RS15310 3113887 .. 3113902 -  -3.2  -3.84961   TATTGAACGATTAAA              TCACAG CCGA CTGTGG               GTTGTAAGCCAGAAC  55 135
CTM43_RS15305 NONE
CTM43_RS15300 3112025 .. 3112039 -  -4.2  -2.74242   AATAAGATCAAACAT               GGGTGA TTT TCACTC               CTGCATCGACCAGAT  44 3
CTM43_RS15295 3111360 .. 3111377 -  -4.1  -3.20382   CGGTAGAGCGATTAA             TCG-CGAC GCA GCCGGCGA             GCCAGGCGGGTCCCC  48 4
CTM43_RS15275 3107001 .. 3107022 - -11.5  -2.64045   TCAGCGCAATAATAT           CGCCCTGCC GCCA GGTAGGGCG            TCGCAGATTAACGCT  75 33
CTM43_RS15270 3105876 .. 3105893 -  -8.3  -3.59979   GGGCTGGATGCGAAA             CGCGTCG AGAC CGCCGCG              CGCGATTATTTTACT  62 165
        zntB 3102193 .. 3102212 -  -7.8  -6.09133   GAGCGCAAAAAAAAA            GCCGACTC AACA AAGCCGGC             GTCGTACGAATCAAT 100 215
        dbpA 3100243 .. 3100269 -  -6.5  -3.64703   CTGGGCGCATTGAAA         CCATGTTCAGC GCGAT GCAGAACGTGG         TGCCTTCGCACCTGA  61 259
CTM43_RS15210 NONE
CTM43_RS15205 3092643 .. 3092656 -  -3.8   -4.1899   CGATCTGACGGAAAA               CCAG TTGACG CTGG                CGACCGCCGACCAGA  62 121
CTM43_RS15185 NONE
CTM43_RS15180 3087484 .. 3087502 -    -6  -3.28791   ATCGTCGCCTCAGAA             CAAATCGC TGC GGGATTTG             AGCAGGTTTTCCACA  57 1
CTM43_RS15175 3087017 .. 3087027 -  -6.8  -3.48924   CCAGGCGTTACAGAA                 CGTC CAT GACG                 ATGAAAAGCTGGCGG  60 145
CTM43_RS15165 3084420 .. 3084432 -  -7.7  -2.62983   TTCACCGCCAGATTA                GGCAA AGA TTGCC                TTCCACAGTAGCGAG  58 102
CTM43_RS15160 3083478 .. 3083515 - -16.1  -3.14132   TCCCCGGTGGACTAA   CCCCGCGCCAGCCCGGG TCAG CCCGGGCCGTCGCTGGC    CGCCGCCAGCAGCGG 100 5
CTM43_RS15135 3079174 .. 3079186 -  -9.1  -2.89564   GCTGCACGCCAGACA                GGCAG CAG CTGCC                CCAGTTTCGCGCAAA  65 65
CTM43_RS15130 3078035 .. 3078061 - -11.6  -5.31877   AGTGACGACAAAAAA         TAATGCCTGCCG GAT CGACAGGCGTTA         TTTCAGGCGTGAGTT 100 28
CTM43_RS15125 3076635 .. 3076655 -    -4  -2.54166   TCCTTAAGGAAAACG            GTTAACAG GACGG CTGGTAAC            GCTGGTACTGGCGCT  44 6
CTM43_RS15120 3076170 .. 3076195 -  -3.2  -3.01924   CAGCGGGCGCTAATA         GAGAGAGTCA TTCTGC TGCCTCCCCC          TGCCAGTCGTCAGGG  45 7
CTM43_RS15115 NONE
        argE NONE
CTM43_RS15105 3073480 .. 3073503 - -13.9  -3.74077   CTCCAGACAGCGAAA          GGCGGGATC ATAGCA GATCCCGCC           GCCAGTGGCTCACGC  95 35
CTM43_RS15100 3072311 .. 3072324 -  -5.9  -2.78384   GTTCCGCCCAGGATA               CCGGC CTGG GCCAG                TACGCGAAGGATGAT  47 208
CTM43_RS15090 3069623 .. 3069641 -   -11  -3.66666   CGGAAAACGGTCAAA             CATCAGCG CAG CGCCGATG             AGAAAGCCACCGGCG  78 289
CTM43_RS15080 NONE
CTM43_RS15075 NONE
        paaI NONE
        paaJ NONE
        paaK NONE
CTM43_RS15055 NONE
        paaB NONE
        paaC NONE
        paaI 3060447 .. 3060469 -  -3.2  -4.55295   CCCGTCACAAATAAA           GGCGTCGCGC ATT ACACGTCTCC           CGTGATTGTGCCGCC  66 14
        pcaF NONE
        paaF 3057863 .. 3057895 -  -5.5  -4.38171   CATAGCACAGGAAAA     CCCCGGCTTATGGC GTAAAG GCC-TCAGCCGGGT      AACCGGGGAGAGAAT  69 40
        paaX NONE
        paaY NONE
CTM43_RS15015 3055793 .. 3055807 -  -3.4  -3.60296   CAGTCTGACGCGAAA               GCGGCC ATC GACAGC               GTGGTTGCAGCCTAA  50 77
        hrpA 3051067 .. 3051101 -  -9.3  -3.36581   TAAACGCTTAAGCAA    GTAG-CCCCGGTAAGCG CAG CGC-CACCGGGGACAAC    CAGCCAGGCTATGGG  69 34
CTM43_RS14970 3043615 .. 3043627 -  -7.7  -2.71791   AGTTGTTCGGCAAAG                GTGAC AAC GTCAC                GCAAGTAATAACCAT  58 58
CTM43_RS14960 NONE
        astA NONE
        astD 3037991 .. 3038002 -  -2.2  -2.62396   TATGTCCTCACAGGA                TCCG TTAT CAGA                 ATGGCAGGCCCGGCG  39 21
        astB NONE
        astE NONE
CTM43_RS14935 3034102 .. 3034136 - -12.9  -2.71144   CAGGTCCGGTAAGCA    TGGGCCCGGTAA-GGC GCCA GCCGTCACCGGGCACA     AACAGGCGTCAAGTC  81 79
CTM43_RS14925 3031438 .. 3031473 - -12.6  -4.34263   TTCCAATAACACAAA    TTGCCCGTTTGCGATA AATC TGCCGCAAACGGGCAG     TTTTCAGCCGAGGGT 100 29
CTM43_RS14920 3029797 .. 3029822 - -17.5  -3.17075   TGCCCGCTAAGCGAA         CGGCGGGCCGC CTGA GCTGCCCGCCG          GCTCGGAGTTAAGTA 100 43
CTM43_RS14910 3028097 .. 3028111 -  -3.5  -4.56597   TGGTCTCGGTAAAAA              GC-GCC CGCG GGCTGC               TGCGCGTTCGCGCTG  69 266
CTM43_RS14885 3024899 .. 3024909 -  -4.6  -4.13945   ATGGCGAGGGGAAAA                 CCGC TGA GCAG                 CTGCGCCGGGCGGAC  64 179
CTM43_RS14875 3023283 .. 3023295 -  -6.2  -2.62184   TCGCGCGCTACAGCA                GGCG CTGAT CGCC                GAACAGAAGGTGGCG  48 180
        malI 3018921 .. 3018932 -  -3.6  -3.66178   TGGCGCAATGCCAAA                GGCG AAAG CACC                 CTCAACCTCTCGGTT  54 512
CTM43_RS14845 3014488 .. 3014505 - -10.5  -5.72616   AGCGACATAAAAAAA             GCCGCCC CGAG GGGCAGC              CCAGACCGCTGACAA 100 227
        fumC 3012915 .. 3012962 - -14.9  -3.88291   CAGTATCGCTACAAA CCGGAGGCGCAGTCGCTGAGAT TGCTT ATCCC-GCGCCTGCACCTCTGG CTGGCTAGCGAATAG 100 30
CTM43_RS14815 3008521 .. 3008533 -  -9.1  -4.25848   AATCGCTGATGAAAA                TCGCC CCT GGCGA                AAAAGAGATTAGCGA  81 116
CTM43_RS14800 3006250 .. 3006264 -  -9.2  -2.67694   AGTACTACCACATCA               CCCGCC AGT GGCAGG               AACGCGGCGGCAACA  60 47
        pntA NONE
CTM43_RS14780 3001854 .. 3001873 - -13.6  -5.36441   CCTGCATATAAAAAA            GCCGTCTC ACAG GAGACGGC             TTATAAACAAACGTT 100 60
CTM43_RS14775 3001531 .. 3001546 - -11.8  -5.64274   CCAGGCACAAAAAAA              GGGCCG TTGG CGGCCC               CTGTCACTGTCCAGC 100 50
CTM43_RS14755 NONE
CTM43_RS14735 2992883 .. 2992894 -  -2.2  -2.80816   TCGCCAGCTACTATA                GCCGC CTC GCG-C                TCCCCTCTCAACGCG  40 80
        smrA 2992257 .. 2992272 -  -2.4  -2.61004   GGAGCTGCAAAAAGC              CGCCCG CGAG CTGACG               CTGCTTCTGCGCTAA  39 37
CTM43_RS14720 NONE
CTM43_RS14715 2989930 .. 2989948 -  -2.5  -2.79915   ACGCACCGCATCACA             GATAAAT GCCTG ATTCATC             ATAGGTTCCTTACGC  40 35
        pcaF NONE
CTM43_RS14705 NONE
        pcaD NONE
        pcaC 2985846 .. 2985856 -  -8.2  -2.55551   GATAAGTCGAAGGGA                 CCGC GTA GCGG                 CGATTTTGCTGGCCG  53 416
CTM43_RS14660 2979032 .. 2979042 -  -5.4  -3.32411   TTAAAATATTAAAAG                 CTCA GAA TGAG                 GTGACGGAATCATTA  54 67
CTM43_RS14655 2976192 .. 2976210 -  -2.2  -3.53091   AGCCGGGCGGTGAAA             GCGCCAAC CCG GCAGGAGC             AAGGTTACAGGTTAT  47 37
CTM43_RS14650 2974886 .. 2974913 -  -4.7  -3.36671   AGCGCAAGCTGATAA        CCGGCCAGCCC TATTAC GAACAGGCCGA         TGTCGACCGCCTGCT  51 316
CTM43_RS14635 2972258 .. 2972269 -  -4.4  -4.08767   CGCATCTCGGCAAAA                TCAG CGGC CTGA                 TGCATATCCTTATAT  60 135
CTM43_RS14630 2971251 .. 2971284 -  -9.5  -4.20516   TTTTTAGTTAATAAA     GTTCAGGCGCGTACGA CAA TCGCGCGCGCCTGG-C     TGAGGGGTTAATGGG  83 33
         mqo 2969330 .. 2969349 - -12.2  -5.23016   AAATAACGCAAAAAA            GGGAAGAC CATG GTCTTCCC             TTTTGTTCACTGTCG 100 50
CTM43_RS14620 2967977 .. 2967996 -  -4.2  -3.85698   GCGCTGCTGGATAAA            CCCGCC-GC TGA GCTGGCGAA            AGCTTTTGCCGGCGC  57 319
CTM43_RS14570 NONE
CTM43_RS14565 2958758 .. 2958770 -  -4.8  -4.18018   TTCCGCCAGCCAAAA                GCAG TGAAC CTGC                GCAGCCCTCAGCGTC  64 116
CTM43_RS14535 NONE
CTM43_RS14530 NONE
        bioD 2949781 .. 2949803 - -10.6  -3.57971   ATATTTATCTGCAAA           CTGCTGGC GGTGCTG GCCAGCAG           CGGCTCCGGCGCGCC  71 297
CTM43_RS14490 2942858 .. 2942868 -  -2.4  -4.46212   TGGCCGAGCACAAAA                 CGTC CGG GCCG                 TCCCTGCTGAAGCCG  64 46
CTM43_RS14475 2941436 .. 2941455 -  -5.6  -2.95298   GGCAGGGATCACACA            TGACGAGC TTAG GCCCGTCC             CCACCCCGCCACGAT  51 14
CTM43_RS14470 2939816 .. 2939828 -  -6.3  -2.78547   GTAGCCCATCAACCA                TTCTC GGG GAGAA                CTCTCGAGGAGAATG  54 243
CTM43_RS14465 2938284 .. 2938311 - -15.6   -2.5304   GAAATAACTGAAGAG        CCGGTGTCGACC CCGG GACCGACACCGG         AAAAAGATTATTGCG  95 33
CTM43_RS14460 2937575 .. 2937612 -  -5.6  -3.57389   TAGTGAAGAATAAGA  GTCAGACGGCTGC--CGGC ATG GCCGACGCAGCCGTCCT-C  ATTGAAGGGATTATC  56 36
CTM43_RS14445 2933828 .. 2933844 - -11.5  -5.40625   AGATCAGACAAAAAA              CCGGGCA GCA CGCCCGG              TTATCTTGTCAGACT 100 50
CTM43_RS14435 2932448 .. 2932459 -  -2.2  -4.66833   CGGCAATGTGAAAAA                TCAG GGGC CCGA                 ATTACTTGCCCCTCT  66 101
CTM43_RS14420 2929848 .. 2929867 - -16.4  -2.52464   CCGGTGGCGAAGTTA            CCCCCGCC CGAC GGCGGGGG             CTGTGGCGCTTCTGA 100 292
CTM43_RS14410 2929162 .. 2929186 - -18.7  -2.91695   TTCAGGGGGAAAGGA          TAAAGGCCCGC AGG GCGGGCCTTTA          AGGTAACATCGTCGG 100 53
CTM43_RS14405 2928168 .. 2928185 -  -9.1  -3.55622   CGCAAGGTGCTCAAA             GCCCTGCG CGT CGC-GGGC             ATGAAGCTGGCCATC  66 376
CTM43_RS14395 2926926 .. 2926943 -  -5.6  -2.56288   AAAGGATTTAATTTA             GAGTGA TAATAT TCACTC              GATTATATTCAGGCA  48 104
CTM43_RS14385 2924550 .. 2924564 -  -4.2  -3.31726   GCGCTGGAGACAATA               CATCTG CCG CTGATG               CCCGCCGCTTTTCTG  47 361
CTM43_RS14355 2918786 .. 2918801 -    -6  -3.89412   AGCGAAATCAGCAAA              TCGCCG GGAT CGGCGC               GGCGCTGATCGAGCA  64 74
CTM43_RS14345 2917350 .. 2917375 -  -7.5  -3.81488   GCCCTGGAAATAGAA         GGCTGCCACAGT AGC ACAGCGGC-GCC         CGGCATACCCTCTTA  69 61
CTM43_RS14340 2915826 .. 2915842 -    -5  -2.60032   TCGGCGCCAAAAACG              CCCTGC TGACC GCGGGG              ATGATCATGTCGGTG  43 419
CTM43_RS14325 2910376 .. 2910393 -  -8.4  -6.07627   AGGGGCAAAAAAAAA             CCGCCA TATGAC TGGCGG              TAAATCAATGCTTGC 100 149
CTM43_RS14320 2909532 .. 2909542 -  -4.6  -3.83502   GACGGCCACAGTAAA                 CCGG TCG CCAG                 GAGGGTCGATGATGA  59 305
CTM43_RS14305 2908000 .. 2908016 -  -8.1   -3.3771   TCGCAAACGAGAATA              TTTCATG GTA CATGAAA              AATTTTCATTTACCG  64 31
CTM43_RS14300 2906683 .. 2906695 -  -3.3  -4.08767   GCCAGGTTGTGAAAA                CAGCA GGA TGCGG                CGCAGGTGGGCGATA  58 100
        urtA NONE
        urtB NONE
        urtC NONE
        urtD NONE
        urtE 2901086 .. 2901107 - -18.7  -3.58329   CAAATAGGCCGCAAA           CCGGCGGCG CGAC CGCCGCCGG            CCTGGTCAGATGGTC 100 31
CTM43_RS14260 2897978 .. 2898009 -  -6.6  -4.26076   CTATGCGGAGCAAAA      CACCACGCCGGT GCGTCAAA ACCAGCGTGATA       CAATGATTATCCCTT  72 190
CTM43_RS14240 2896056 .. 2896080 - -15.7  -5.24129   CCGTCGCACAAAAAA          GCCCGCCGG TATCGCG CCGGCGGGC          TTTTTTTCTCTGCGC 100 52
CTM43_RS14230 2893816 .. 2893842 -  -7.9  -2.70143   AGCGGAAGTAGATTA        CCGCTCCCCGGG GCGA CGCGGGG-GCGA         TGATTAACGCAGGTA  58 29
CTM43_RS14195 NONE
CTM43_RS14190 NONE
CTM43_RS14185 2884751 .. 2884780 -  -4.2  -3.10464   TGATCAAGGCCAATA       TCGCCCGTCTGCC CTGAC GGCAGCCTG-CGA       GTCAGTCGGCAATGA  48 27
CTM43_RS14175 2883131 .. 2883148 -  -4.8  -3.01712   GCCGCTGGCCGAAGA             GTGGCG CTGGCT CACCAC              CTGGCTGGTGTGGCG  46 73
CTM43_RS14165 2880784 .. 2880799 -  -3.2  -3.37796   TTGCATTATTGATAA              CCGTCGC CAC ACG-CGG              CTCCTTGCCCACCAT  48 100
CTM43_RS14160 2879854 .. 2879872 -  -3.9  -2.71101   CGTGCAAACAAGCGA             TCCTGAT CGACC ATCAGAA             CACCGACCTCCCCAT  44 20
CTM43_RS14155 2879318 .. 2879336 -    -3  -3.59372   TTAACGTAAATAAGA             CCAATGCA TCG CGCACGGG             TTGTTCTTCACGAAA  49 188
CTM43_RS14150 2877872 .. 2877908 - -10.4  -3.10597   GTGCGCAGTGAAAAG   GATGTGGTC-ATAAAAG CTCC CTGTTATCGACCACATC    ACTATGTTTTTAACC  73 77
CTM43_RS14145 NONE
CTM43_RS14140 2875756 .. 2875771 - -11.8   -3.3341   AAAAATCCTGCACAA              CCCGGC CGCA GCCGGG               TGTATAGATGGACTA  82 41
CTM43_RS14135 NONE
CTM43_RS14130 2874877 .. 2874908 - -11.5  -2.78018   ATGGCGGATGAATGA      GACAGGCGGCGCC GCAAGA GGCGCCGCGTTTC       AGATGATATAATTTA  76 41
CTM43_RS14115 NONE
         hcp 2873055 .. 2873086 - -11.5  -2.71011   ATGGCGGGTGAATGA      GACAGGCGGCGCC GCAAGA GGCGCCGCGTTTC       AGCACTATATCATTT  75 42
CTM43_RS14070 2867486 .. 2867496 -  -4.6  -3.05715   AACTGCCTTAGCGAA                 CCGC TGT GCGA                 GGCGACCACCCAGCT  47 113
CTM43_RS14060 2865085 .. 2865100 -  -7.5  -3.28001   GATGCCGAAACTGAA              CGCGC TGTTAG GCGCG               GTGATCAACATCGGC  56 519
CTM43_RS14035 NONE
CTM43_RS14030 2861373 .. 2861396 - -10.2  -3.73224   TGACGGGCGATGAAA          CGGCGGGCAA AGAA CCGCCCGCCA           CGGGGTCAGACCGAC  79 31
CTM43_RS14025 2860417 .. 2860436 -  -5.7  -2.64155   GGGCTTTCAAACGCA            TCACCGGC CAGCC GCCGG-GA            GCCCTGCGCGCCACG  51 59
CTM43_RS14015 2858118 .. 2858162 - -13.7  -4.59773   TCGGAGGCGGAAAAA CAGGCCGCA-GAGCAGCATA TTGCGC TGTGCTGCTCCCGCAGCCTG TCGGCCAATTTAGTT 100 35
CTM43_RS14000 2854853 .. 2854884 -  -5.8  -2.87931   GCGATGCCGGACACA      GCA-CCACCCCGG ATATTGG CCAGGGAGGCTGC      GCGGCGATGGAAGAT  48 264
CTM43_RS13990 NONE
        uraD NONE
        uraH 2851154 .. 2851171 -  -9.9  -2.76453   GGATAATGTCAAGGA             TATCCCC TGGT GGGGATA              GGAGAATAATTATCC  68 316
        hipB NONE
CTM43_RS13970 2848993 .. 2849023 -  -3.9  -4.78107   CACTACTATCAAAAA       GCTCAATCCGAAC GTCGA GTTTGGCGTGAGC       CCGGCGGGGGTGTGG  75 489
CTM43_RS13960 2847522 .. 2847542 -  -4.5  -4.26903   TTGAGCTCATTAAAA            CCGGTCCCG CGG CGACGCCGG            GCGAGCTTGAGTATC  67 516
CTM43_RS13935 2842397 .. 2842407 -  -4.6  -3.86346   TGATGCGCGCATAAA                 CCGC ACA ACGG                 TTTATCCTTTACCTT  59 78
CTM43_RS13915 2838729 .. 2838767 - -10.2  -3.21099   CTTGCGCATCAGTAA   CGCCCTTACGCCCACC AGCGGAG GGTGGGCGCATCAGCG   CCGGTCGGGCAGGTG  73 20
CTM43_RS13880 2829956 .. 2829969 -  -3.7  -3.28712   CGGCCGCGTGGAGAA               GTGGC TGTC GCCGC                TCATGGGCGGGCTGA  47 378
CTM43_RS13870 2828556 .. 2828568 -  -7.7   -4.2679   TAACGGGCATGAAAA                GTGAC ACT GTCAC                TGATATTCTCAAGGC  75 34
CTM43_RS13865 2827549 .. 2827565 - -12.3   -3.4072   CATCCGCCAGGATAA              GTGGCCA CCA TGGCCAC              TTCTTTCCTGGCGTG  85 50
CTM43_RS13810 2815490 .. 2815514 -  -8.5   -3.0752   GACAGCAGGGTAAGA          CATGCCTTCAC TCA GGGAGGGCATG          ATGTGCTGAATTCTG  63 12
CTM43_RS13805 2814926 .. 2814938 -  -5.5  -4.25256   CTGTCACTAAAACAA                TCCAG GAG CCGGA                TATGAAAAGAGAAAC  66 439
CTM43_RS13795 2813256 .. 2813285 -  -2.7  -4.34263   CCGGAAGAAGAGAAA       GGGCTGC-TGGAGA TTA TCGCCACGCTGCCT       CTCATGCCTGCACGG  62 508
CTM43_RS13780 2808983 .. 2809014 -  -7.2  -3.53012   TGGTGCTGGTTGAAA      TGGCCG-ACACCGTG TCT CACGGAGGGCAGCCA      GAAATTCTCCGTATC  60 482
CTM43_RS13765 2807696 .. 2807708 -  -3.3  -3.04144   TGGCGATCGGGAATA                CCCAG GCG CTGCG                CGGCCATCTGAGTGG  45 285
CTM43_RS13755 2806170 .. 2806185 -  -3.2  -3.66178   GGCCGTAACCTTAAA              TCGACA AGCC TGGCGA               TCCGCCCCGGGCATC  52 196
CTM43_RS13735 2801629 .. 2801639 -  -3.2  -3.86252   CCTTATTAAACACAA                 TGAC GTA GCCA                 TTCAGTACGCTTTAA  55 341
CTM43_RS13710 2794823 .. 2794840 - -11.3  -4.56607   CTATCAACGACAAAA             GAGCCAG CAAG CTGGCTC              TTTGTTCCACCGGGT 100 49
CTM43_RS13695 2792904 .. 2792921 -  -2.5  -3.05844   CGGGCGAGCTCAAGA             GTCGCGG TCAT CAGCGGC              GTTCCGTCAGCCAGT  42 18
CTM43_RS13690 2791730 .. 2791742 -  -2.7  -2.62396   TATTCCGCGATATTA                TTCAA ACG CTGAA                TTGCATGGCACGCGC  41 55
CTM43_RS13685 2791099 .. 2791116 -    -7  -5.87688   AGAATGGAAAAAAAA             CAGGCT TGCGCC AGCCTG              TTACTATTGAATCAT 100 140
CTM43_RS13665 2786919 .. 2786929 -  -2.4  -2.75712   GGATGGACCGAACGA                 CCGG CTG CCTG                 TTTCTGTTGTTTGCC  39 125
CTM43_RS13620 2779851 .. 2779863 - -10.5  -2.97171   GAGGCTACGAAATCA                CCGCC TGG GGCGG                CTGGCAAGATAAACG  64 224
        oxlT 2778182 .. 2778200 - -10.3  -3.13432   GCGAATATCAGTGAA             GTGACGG GCGAG CCGTCAC             TTCTGCCCGGCGGAC  73 43
CTM43_RS13600 2776507 .. 2776517 -  -2.4  -4.00038   CAGCATTACTACAAA                 TCGC TGG GCGT                 GATGGCGATGACCGA  56 314
CTM43_RS13590 2774175 .. 2774188 -  -6.7  -3.64822   ATTGGCCGACGCAAA               GCGAT TATG ATCGC                CGCCCTGCTGGCGCT  61 451
CTM43_RS13580 NONE
CTM43_RS13575 2769902 .. 2769915 -  -4.5  -3.88438   TCAGATCAAAGACAA               CGCCA TCGG TGACG                CCAATCAGCTCTCGG  59 360
CTM43_RS13560 2767328 .. 2767357 -  -2.6  -3.48276   CCGGGCGGTAGAGAA       GGTGGCCGACGC CTGATC GCGCCGGTTGCC        GTGCCCCGGCTGGCG  49 44
CTM43_RS13520 NONE
        hpxX NONE
CTM43_RS13510 NONE
        hpxZ 2757140 .. 2757156 -  -2.1  -2.73085   GACTCCAAATAACAT              GTTACCG GAC CGGAAGC              GGGCCGGCGGATACC  39 72
CTM43_RS13500 2756636 .. 2756654 -  -4.6  -3.59979   GCGCCGCATGTTAAA             TATCCTGC TGG GCAAAATA             TAGTTACGGTCATCC  55 66
CTM43_RS13490 NONE
CTM43_RS13485 NONE
CTM43_RS13480 NONE
        fabF 2750745 .. 2750772 -    -9  -3.57561   CCGCAACGGTGGAAA        TCCCCCGTCGGC CAGT ACCGCGGGGGGA         GTTGACGATTATTCC  66 34
CTM43_RS13465 2749902 .. 2749915 -  -3.9  -4.65895   CCTTGGATGTAAAAA               TGTTT TTTT AAACA                AATCAGAATAGTTCT  68 185
CTM43_RS13460 2748569 .. 2748584 - -10.4  -3.95787   TACCAGACGCAGAAA              CCCTGC GAGG GCAGGG               ATATCCCGCCTTTGC  82 414
CTM43_RS13450 2746720 .. 2746732 -  -2.6  -3.21099   TTCCTCCACCATCAA                CAGG CTGAT CCCG                AATTGAGCAAGCTCT  45 183
CTM43_RS13445 2745781 .. 2745819 -  -8.9  -3.54424   TTTCACGTCGGCAAA  GGGGAATGT-CCGCT-CTG AGC CAGGAGCGGAACTTACCCC  GATGAAGTAAATCCG  71 69
CTM43_RS13430 2743281 .. 2743291 -  -4.6  -3.09878   CCCAGGGATTCAACA                 CCGC GGA GCAG                 TTTTATACCTATCTG  47 339
CTM43_RS13410 NONE
        guaD 2737935 .. 2737948 -  -2.3  -3.75933   ATAGATTTTATCAAA               GGGAA GCAC TACCC                TTACGGTAACTGGTA  50 136
CTM43_RS13380 2731528 .. 2731546 - -14.6  -3.28712   CGGTCCGCCCGATAA             CCGTCTCC GCT GGAGACGG             AGCCGGAAATTTACA  93 36
CTM43_RS13375 NONE
CTM43_RS13370 2729225 .. 2729248 - -14.6  -3.64192   AAAAATAGCCGTAAA          GGCTCAGGAC GAAC GCCCTGAGCC           GGCGAGTTAGCGGAA  95 32
CTM43_RS13360 2727696 .. 2727722 -    -3  -2.86164   GCGGGAACGATCACA         GGACCTCC ATTTATTCAGG GGAGATCC         GGGCGTGCAGGGGTG  42 182
        tenA NONE
CTM43_RS13350 NONE
CTM43_RS13345 NONE
CTM43_RS13340 2724541 .. 2724566 - -17.7  -2.75844   GCCGCTACGTTAAAG         CGCTGACGGAA TGCC TTCCGTCAGCG          ATAGCAAGACTCAAT 100 36
CTM43_RS13335 NONE
CTM43_RS13330 2721319 .. 2721339 -  -9.8  -6.11392   AAAGAAATAAAAAAA            GCCGATAA GGACA TTATCGGC            TTATTGCAGGCAAGG 100 80
CTM43_RS13325 2720132 .. 2720161 -  -8.5   -2.6063   CGCAGGGAGAATGTA       GGCCCGGTAA-GGC GTA GCCGCCACCGGGCA       TTGAAGCGGGAACGG  61 171
CTM43_RS13320 2717914 .. 2717933 -  -6.4  -3.86202   CTGCAGGAGAGCAAA            GCCTG-ACC CAC GGCGCAGGC            GTCTGGCGGACGGAA  66 163
CTM43_RS13295 NONE
        pqqA 2711968 .. 2711993 -  -2.4  -2.66899   GGGTAATGAATGAAG         GTGCCCGCGCG AACGG CGGGCGGGG-C         GATTAACGGTTAGAA  39 25
CTM43_RS13285 NONE
        pqqC NONE
        pqqD NONE
CTM43_RS13270 NONE
        pqqF 2706504 .. 2706514 -  -8.2  -2.79302   ACGAGGTGCAGGAGA                 GCCC GCA GGGC                 GCGGCGATCCTTACG  54 82
        katG 2700314 .. 2700335 - -18.7  -5.18726   GCGGTATAAGAAAAA           CGCCCCGGC GGGA GCCGGGGCG            AGGGGATTACAGGTC 100 32
CTM43_RS13225 2696442 .. 2696468 - -16.6  -2.89859   CAACTGATAAAATAT         GTCGCCGCCG GCACCCT CGGCGGCGAC         CGCCATCAGATATTC 100 31
CTM43_RS13195 NONE
CTM43_RS13190 2689193 .. 2689219 - -15.8  -3.05384   CGCCTCGGTACGCAA         CGGCGCCTGGCA TTG CGCCATGCGCCG         GATGACGGAGGCGTG 100 43
CTM43_RS13170 NONE
CTM43_RS13165 2685869 .. 2685879 -  -5.4  -2.90763   GGCAGATCCTACATA                 CTTC GGC GAAG                 GCGTTCTATAATTTG  49 179
CTM43_RS13160 2684339 .. 2684371 -  -7.7  -4.07885   GATTTGCCGGTAAAA     CCGGTGGCCAGCGG GCGGTT CCGCT-ACCAACGG      ATCAATGTTGAAACG  71 373
CTM43_RS13125 2679953 .. 2679980 -   -17  -4.07568   GGTTGGCCGGGAAAA        TACCGGCGCGCG CTGG CGCGCGTCGGTA         TGCCGGGAGGCTTAG 100 37
CTM43_RS13120 2679147 .. 2679163 -  -2.9  -2.75647   CTGCAACGACATAAC              TGCCTGC TAT ACAGCCA              TTTCGCCAGCCAGCA  41 412
CTM43_RS13110 2677484 .. 2677499 -  -6.8  -3.66178   GGTTTCAAGGGCAAA              CCCGGT AACG ACCGGA               TGAAATGTAACCCAA  63 150
CTM43_RS13105 2677256 .. 2677279 - -13.2  -5.61596   ATTGCCATAAAAAAA          CACCATCCTG GCAA CAGGACGGTG           TTGTTTATCATCACT 100 52
CTM43_RS13100 2675396 .. 2675417 - -10.8   -3.7282   TGACGTTATTAATAA           CCGGGCCG CTATTT CGACCCGG            TGACAGTGATTAAAT  81 35
CTM43_RS13095 NONE
CTM43_RS13090 2673781 .. 2673804 -  -3.8  -4.42386   GCGCCAGTGACAAAA          CTGGCAGG GGCCGATA CCCACCAG           TTTTCGTGTTCAGTG  65 86
CTM43_RS13085 2671742 .. 2671773 - -19.6  -3.53224   TACCCGGTCCGGAAA      CACCGGCTAAGGGCG TGG CGC-CTTAGCCGGTG      GGGGGACATGGAGAT 100 40
        adhP 2668639 .. 2668659 -  -2.5  -3.48498   AAAGGAACCAAGGAA            TTGCGCTAA GCA TTTGCGGAA            ATTGCATTTACTTCC  47 106
CTM43_RS13065 NONE
CTM43_RS13060 NONE
CTM43_RS13055 NONE
CTM43_RS13050 NONE
CTM43_RS13045 2662524 .. 2662540 -  -2.2  -2.52623   GTTCTGCCAGAATAT              CCTGAC TCAGC GTCATG              GGGACTCCTTATCTG  39 34
CTM43_RS13040 2661237 .. 2661247 -  -8.2  -3.28712   CCTGCTGCTGCAGAA                 CGCC AAA GGCG                 GCGAGATGCTGGGGG  59 226
CTM43_RS13030 NONE
        ppk2 2658660 .. 2658687 -  -7.6   -4.1822   GGTTATGGTAATAAA        CCTGGCGCTGGC ATTA ACCAGCGCGACG         GGAAATAATCAAAAC  75 34
CTM43_RS13020 2657974 .. 2657998 - -14.3  -3.54424   CTTCACGGCGCGAAA          CCCGCTCCG GAGATGT CGGAGCGGG          TTCCCGGCAGTCAGC  93 359
CTM43_RS12990 2652023 .. 2652050 - -10.4  -3.15544   CGGTATTCGGATTAA        CGCCGTGGCCCC GGGC GGGACCGAGGCG         CCGCCGCGCCTGACG  66 235
CTM43_RS12950 2644663 .. 2644673 -  -8.2  -4.05446   GCGCCGAAGGAGAAA                 GCGG CGG CCGC                 GGGGGCGATTGAAAC  71 357
CTM43_RS12940 2642750 .. 2642768 -    -6  -6.02914   CGTAGATAAAAAAAA             CGTGCT GACAGAG AGCACG             TGGTAAGCGTAGCGG 100 69
CTM43_RS12935 NONE
CTM43_RS12930 NONE
        narH NONE
CTM43_RS12920 NONE
        narI 2634475 .. 2634501 - -13.6  -3.68244   AGGATGAATGGTAAA         CGCCGCCAGCGC TCA GCGCCGGGAGCG         TACCACCTGGTAACG  93 11
CTM43_RS12890 2628662 .. 2628676 -  -2.7   -5.5112   CTGATGAACAAAAAA               CCGCG CTGGC CGCCG               ACATTACCGAGGTGC  85 307
CTM43_RS12825 2618521 .. 2618533 -  -3.3  -2.94199   GATTTATCAATGAGA                TCAGC GTC GCAGA                GTTTCCAGTAACAGC  45 13
CTM43_RS12820 2616790 .. 2616811 - -10.1  -3.52918   TAAGCGGGAAATTAA           CAGCAGCGA TGTG TCGCAGCTG            GTTGAAGATAATTAA  77 91
CTM43_RS12805 2612964 .. 2613007 -  -9.5  -4.42639   AGACGGTAAGGAAAA GCGCTTCGCCCGCCGATCGC GAGAG GC-ATCGGCGGGGAAGGGGC GTGTTATTCGAAGCG  85 29
CTM43_RS12800 2610905 .. 2610928 -   -11  -2.79183   CGCAGGTCGATTACA          CCATCGTCGCC GCT GGCGACG-CGG          TGAAACTCGACCTCT  66 204
        rihA 2609450 .. 2609482 -   -20  -3.05384   CGGGCTTCGACTTAA      CAGGCCCCTTTCCC GCCAG GGAAAAGGGGCCTG      GCATAGAGGTCAGGC 100 35
CTM43_RS12770 NONE
CTM43_RS12765 2606406 .. 2606437 -  -5.9  -3.57462   GAGGTTATCGTCAAA      GTCGATGACACCCT GGCCG AGGGCGTTATCG-C      GCATATGAATGAGCT  55 206
CTM43_RS12750 2602795 .. 2602815 -    -4  -4.36914   GGGTTGTTTACAAAA           CAG-CG-CCC CCT GGGCCGTCTG           GCGGGCCGCCAGCAG  65 268
        yncL 2601699 .. 2601715 -  -9.4  -5.00616   TTCGCGCGTAAAAAA              GCAGCC TTCGG GGCTGC              TTTTTTAGGTTTCGT 100 56
CTM43_RS12690 NONE
        cydB NONE
CTM43_RS12680 2590169 .. 2590202 -  -3.3  -3.75479   CAAAAGTGAAGATAA    GATG--GAGAAGTCC CTTTTC GGACCTCTCTGCATC     CACCCTCAGACTTTT  53 31
CTM43_RS12675 2589798 .. 2589820 -  -8.4   -5.2189   CGAAGGATGAAAAAA           GGCCTGAC GCGGAAG GCCAGGCC           AGAGTGTTACGCTTT  95 32
CTM43_RS12670 2589355 .. 2589372 -  -4.8  -4.13282   ACCATATCCTCAAAA             TGCCGC ACCCGG GCAGCA              TTGTGGCCTCCGTCA  64 100
CTM43_RS12660 2587227 .. 2587244 - -10.5  -5.80951   ATCCAAAAGAAAAAA             CCGCGAG CGAA CCCGCGG              CCAGACAAGATGACT 100 53
        benE 2585313 .. 2585324 -  -7.2  -3.54543   AGCCATCGGGTCAAA                GCCG CCAC CGGC                 CTGACGCCCTCCCAG  60 41
CTM43_RS12640 2583290 .. 2583335 -  -6.1   -3.2302   GCGAATGAGAATACA CCG-CTGACCGTCGATACCCTG AAG CAGGTTATCGATGATATGGCGG TCGACGCCGTTAAAT  54 107
CTM43_RS12620 2579608 .. 2579629 -  -6.6  -3.72576   CGGTTTGTGATCAAA           TGCCGGGTG GCGAA CACCCG-CA           GCAACCAGGTAGCGT  61 148
CTM43_RS12605 2575916 .. 2575955 -  -8.7  -3.42197   GAATAAATCCCATAA TGCG-CAACTGTCGCCACC GACC GGTGGCGAC-GTTATCTCA  CATGACCACCACCGG  66 23
        pcaH NONE
        pcaG 2571371 .. 2571402 - -18.8  -4.07568   CCCTGTGGTTGAAAA      CACCTTCGCCCCGC AGAA ACGGGGCGAAGATG       GCGGTCACCGCGACG 100 42
CTM43_RS12580 2570081 .. 2570094 -  -3.9  -3.05596   CATGTTGCTATTGAA               TCATT TTTG AATGA                AGTGGTTTTAACCTT  47 249
CTM43_RS12575 2567615 .. 2567630 - -11.8  -5.28176   GTCACCCATAAAAAA              GGGCCC GGAT GGGCCC               TTTTGTGTATGTCGA 100 41
CTM43_RS12555 2564587 .. 2564622 -  -4.6  -3.55444   TCCGGACGCGTGAAA    GTGACCCACCGCCAACC GCA GGA-GGCGGTGCATAAC    CATTTACAATTATAT  55 307
CTM43_RS12540 2562571 .. 2562583 -  -4.9  -5.13521   AAAGCATTGAAAAAA                TGTAT GCG ATACA                AATAGCTGGCAGCAA  80 95
CTM43_RS12535 2561365 .. 2561375 -  -2.4  -4.13767   CGGCGTAGGGGAAAA                 CCCG GTC CCGG                 CCAGCGAGGCGATTC  59 144
         blr 2560016 .. 2560067 - -11.6  -4.65916   GGGAGTGTAATAAAA GCGCGAGCATACGTGCAACCGGTTT CTG AAACCGGTTGCACAGTTGCGAG-GC GGGTCACTGTTTTAA 100 48
CTM43_RS12520 2558573 .. 2558594 - -12.9  -3.10537   TATTCTAAAATCAGA           CCGGGCGCC GAAT GGCGCCCGC            AAGAGAAGATTAACG  84 35
        ydgT NONE
CTM43_RS12510 2557592 .. 2557614 -  -3.4  -3.60627   TCATGCGACCTGAAA           CGAAAAAAAG CCG CTTATTATCG           AATAAAACGATACCA  50 67
        rsxA NONE
        rsxB NONE
        rsxC NONE
        rsxD NONE
        rsxG NONE
CTM43_RS12480 NONE
CTM43_RS12475 2551092 .. 2551126 -  -5.1  -3.42257   GGTGAAATAGATGAA    TGCGGGCCATAACCCA GAGT TAAGCTATGAC-CGCA     ATAGAGACGAGACAG  54 41
        dtpA 2548978 .. 2549000 -  -9.2  -6.07627   AGGGGTAAAAAAAAA           GCCGCTAA ACTAACG TTAGCGGC           TTAAAAATAATTAGT 100 54
        gstA 2548144 .. 2548163 -  -8.6  -3.02144   CGATGCGCTGGAACA            CGT-CACCG CCG CGGTGTACG            AGATTATGCTCGCCA  60 175
CTM43_RS12430 2542924 .. 2542952 - -14.7  -4.57341   AACGTGGCTGAAAAA        TACGATGCGGC GCAACCG GCCGCATCGTA        AGGGAAATTATCGCG 100 33
CTM43_RS12425 2541000 .. 2541012 -  -9.1  -2.54896   TCTGGAGTTAACGCA                GACCC ACT GGGTC                ACGCTGCATAACATC  57 389
CTM43_RS12415 NONE
CTM43_RS12410 NONE
CTM43_RS12405 2537506 .. 2537551 - -12.4  -2.52742   AGGCGGGGATAACAT GGCCGACAGTCCGCAGCCGC TGGGCG GCGGCGGCGAACGGTTTGCC TGCGGGGTGATTAAG  78 36
CTM43_RS12385 2535046 .. 2535065 -  -6.4  -5.33405   CTGATGAAATAAAAA            CGCCTG TTATACCG CAGGCG             CTGCAATAATCTGTT  91 12
CTM43_RS12380 2533869 .. 2533886 - -12.7   -2.8001   AGAACGTTGAGTATA             GCGGCGA TACG TCGCCGC              TATCAATGGAGGGAT  81 40
CTM43_RS12375 2533358 .. 2533375 - -14.1  -4.17762   CAGGGGTGAAAACAA             CGGGCGC CGTA GCGCCCG              GGCGAGCCATGGCAT 100 65
CTM43_RS12370 2532603 .. 2532621 - -13.2   -5.1861   GCCATCAGTAAAAAA             GCGACTTC CTG GAAGTCGC             TTTTTTTATCACTCC 100 34
CTM43_RS12360 2530991 .. 2531020 - -13.5  -2.83343   AGATCGAGCAGGAGA       GGCGGTCTGCCGC CGCA GCGGCAGACCGGG        ATCAGCGAATGGTTT  76 27
        sodB 2529497 .. 2529522 - -13.3  -6.10489   AAGGGCAAAAAAAAA         CCACAGCCGGGG AGA CCCCG-CTGCGG         TTTGTCGTTTATGCC 100 34
CTM43_RS12335 2526575 .. 2526586 -  -5.8  -4.07568   GCTGGCGCTGGAAAA                TCCG TTCC CGGA                 TGCCGCCTGCTGCCT  66 163
CTM43_RS12325 2524361 .. 2524379 -  -8.8  -3.57144   CCTTCCATGGTGAAA             CGGAGGCA TCC TGCATCCG             TTAATCTGTAACTAT  69 145
CTM43_RS12320 2523029 .. 2523050 - -13.7  -5.77853   AAGCCTGAAAAAAAA           TCCCCCGCC GATA AGCGGGGGA            GTGTTATTTAACGGG 100 33
CTM43_RS12310 2520755 .. 2520773 - -17.4  -4.99435   GCGAAGAACGAAAAA             GCCCGCCG GAG CGGCGGGC             TTAGACAAGTTAGCG 100 35
         asr 2520225 .. 2520244 -   -15  -5.40072   TCCTCCTGAAAAAAA            CCGGCGCT GTTC AGCGCCGG             TTTATCACCTTAACG 100 50
CTM43_RS12295 2519213 .. 2519226 -  -3.8  -3.93583   CAACTGAGCTATAAA               CGCA TTATGG TGCG                TTCGATTGGACTCGA  57 19
CTM43_RS12290 2519132 .. 2519145 -  -3.8  -2.92389   CAACTGAGCTACAGA               CGCA TTATGG TGCG                TTTAATTGGACTCGA  47 19
CTM43_RS12285 2518966 .. 2518980 -  -2.8  -3.10164   GTATGGACTATGCAA               GGAAAA CGC TTTGCC               AATACACAACATTTT  45 103
CTM43_RS12260 2515512 .. 2515523 -  -7.2  -3.72576   TTCTGCTTGATCAAA                CCCG GCGG CGGG                 GAGGGGGAGCCAGCG  63 85
CTM43_RS12245 2513128 .. 2513156 - -17.5  -2.52946   TTCCCGGACAAAACG        CCCCGGTCGTG CTCATGC CACGACCGGGG        TTTTACTGTGGTCAT 100 56
CTM43_RS12240 2512062 .. 2512074 -  -4.9   -4.4078   TGCTGTGAATTAAAA                TATTC AAC GAATA                AACCCTGTTGCTGGC  67 65
CTM43_RS12235 2511299 .. 2511311 -  -6.2  -3.85698   TTGGTGTCTGATAAA                GGGC CTGTT GCCC                TGATGTGATAAAGAA  64 66
CTM43_RS12230 2511009 .. 2511036 - -15.7  -4.67904   CAGGAAGGGGAAAAA        CTAAAGCGCCG TCCAGG CGGCGCTTTAG         GAAACGTTCAGGGGC 100 47
CTM43_RS12220 2509172 .. 2509215 - -13.2  -2.85947   TGGAAGAGAATATCA GTCGCGAATATCGCGTTGCC TTTC AGCAGCACGATATTCGCATC TATACCGTGTAACCC  85 42
CTM43_RS12210 NONE
CTM43_RS12205 2506981 .. 2506993 -  -6.2  -3.51419   TGACGAAAGATAAGA                GGCG CACTT CGCC                CTGTCTAACACTGAA  59 299
CTM43_RS12200 2505191 .. 2505211 - -15.4  -2.62396   GACGGTCTCACATCA            GCCGCCGG TTAAC CCGGCGGC            CAGGGATTTATTTGA  95 33
CTM43_RS12195 2503739 .. 2503756 -  -3.3   -3.9009   AATCGAGCTCAGAAA             GCATCGC CCCG GCGACGA              TCAATAGCGGTAACC  55 485
CTM43_RS12185 NONE
CTM43_RS12180 2501213 .. 2501231 -  -4.5  -5.24129   GGCGTGGAGAAAAAA             TGCCCGA AGCCA TTGGGCA             AAAGAGTACAAAGAT  83 151
CTM43_RS12175 2500427 .. 2500444 - -12.7  -5.28778   ATCAGGTACAAAAAA             GCCTCGC CGAG GCGAGGC              TTTTCAATAAGCAGA 100 45
CTM43_RS12170 2499516 .. 2499528 -  -7.7  -3.59979   CTCCGGCAGCGGAAA                CTGTG ACT CACAG                GCGGCGGTAGGGCGA  66 355
CTM43_RS12155 2496523 .. 2496533 -  -8.2   -3.6422   CACTGGTTTAAAACA                 GGCG TTG CGCC                 GTTGCTTGGGGGGAT  66 304
CTM43_RS12140 NONE
CTM43_RS12135 2491599 .. 2491613 -  -4.3  -3.60296   CACGCCGAGGGCAAA               CAAAC TGGAT GTTTG               CCCTGTCGGTTAGAC  52 40
CTM43_RS12130 2490578 .. 2490609 -    -5  -3.86346   CCATCGGGTGAGAAA      TCCGCTGCCCCATGA ATA TCA-GGGGCCGCGCT      ACAGCCTGGCGTTTT  59 169
CTM43_RS12105 NONE
CTM43_RS12100 2484952 .. 2484962 -  -2.4  -4.26188   CTCACAGATCCAAAA                 CCAG AAG CGGG                 GATTTCGCCCGCGAA  57 1
CTM43_RS12095 NONE
CTM43_RS12090 NONE
CTM43_RS12085 NONE
CTM43_RS12080 NONE
CTM43_RS12075 NONE
CTM43_RS12070 NONE
CTM43_RS12065 NONE
CTM43_RS12040 2473539 .. 2473553 -  -2.7  -3.10344   TGGCTATGCAACATA               CCCGC TTGCG GCGGC               TTTCGCCAGAGGCGT  45 64
CTM43_RS12035 2471965 .. 2471976 -  -2.2  -3.85698   CGCGGCTGGTATAAA                CTGC CGGC GCAA                 GAGATCAAAAAGAGT  53 246
CTM43_RS12025 2470752 .. 2470767 - -11.8  -5.75342   GGGCGTCAAAAAAAA              CCGGCC TGCT GGCCGG               TTTGACAATCAGATT 100 34
CTM43_RS12015 NONE
CTM43_RS12010 2468344 .. 2468356 -  -6.9  -3.17075   CTCTCCTTAACTGAA                GCGCA TTT CGCGC                ACGTCGTCGGCGACG  57 4
CTM43_RS12005 NONE
CTM43_RS12000 NONE
CTM43_RS11995 NONE
CTM43_RS11990 2463609 .. 2463657 -  -5.8  -2.57132   CTGCCGCGCGATAAC CCGCTGGCGACGCAGCCGACCCTG GCC CTGGAGCAGCTGCG-CGAC-GTGG CGCCGATCCTCTTCC  46 344
        budA NONE
        alsS 2460517 .. 2460527 -  -5.4  -3.52896   TGATGACTTACAGAA                 TCTG ACT CAGA                 TGCAGCTGGCCCATC  56 7
CTM43_RS11970 2459669 .. 2459690 -   -13  -5.72207   CCCAAACCAAAAAAA           GCCCCTGC GCGAAA GCAGGGGC            AAGCCATGTCAGAGC 100 50
CTM43_RS11965 2458209 .. 2458224 -  -4.7  -4.05788   TTTGTCTAAATGAAA              CCGAT ACGTTA ATCGG               ACATCTTTTTGCGGA  62 479
CTM43_RS11935 NONE
CTM43_RS11930 2451204 .. 2451221 -  -5.5  -4.07568   TGTCTCTTGCTAAAA             CAGGTTC GATC GAGCCTG              TGTATTCATGCCCTT  64 39
CTM43_RS11855 2436915 .. 2436926 -  -3.6  -3.72324   TATGGGCAGCAATAA                CCGC CTGC ACGG                 CAAAGTGATGGCGCT  54 361
CTM43_RS11830 2431826 .. 2431852 -  -8.6  -3.14564   TGACCTCGTCACTAA         TGACGATGACGC AGA GCGCCGACGTCA         GACGCTCTGCGGGAG  64 51
CTM43_RS11825 2429420 .. 2429451 - -15.1  -3.85698   GGGCTGGTGGAGAAA      CAGCTGCCGGCGG CGTAAC CCACCGGCAGCGG       CAGAGGGAGCGCGCT 100 54
CTM43_RS11815 2426758 .. 2426778 -   -14    -5.252   GAGGGCCATAAAAAA            GGGCTGGC GCCAG GCCAGCCC            GTGAGGACTACCGTG 100 33
CTM43_RS11810 2426033 .. 2426054 - -10.9  -2.79004   TCATGGGCAAAATAG           GCGAACACT CGCC AGTGTCCGC            ATTCGATTTCAGCGC  74 207
CTM43_RS11805 2424435 .. 2424453 -  -8.9  -3.68853   GCAAAAAGGCCTAAA             CCTTCAG GCTGG CTGAAGG             AGATGTTGTTGACGG  74 10
CTM43_RS11800 2423704 .. 2423715 -  -5.8   -5.1615   TCAATACTGAAAAAA                CAGC TCAA GCTG                 AGTACGGCTGAAATC  86 319
CTM43_RS11750 2412887 .. 2412911 -  -9.9  -2.94322   ATGTCACGGAAACTA          GGCCGGCGC AAGCGCA GCGCCGCCC          GGCAATGGGCATCCG  69 375
CTM43_RS11710 NONE
CTM43_RS11705 2403306 .. 2403323 - -10.5  -3.54543   AGCGATCCGCTCAAA             GCCGCCG CACG CGGCAGC              GATAATCTGTGGTTT  71 230
        mhpR NONE
CTM43_RS11655 NONE
CTM43_RS11650 NONE
CTM43_RS11645 2390777 .. 2390790 -  -4.5  -3.14931   GGGATTTGCCAGCAA               CCAGC TGAT GCTGA                CCGCCCGGCGGTCGC  47 494
CTM43_RS11620 2385249 .. 2385263 -  -2.9  -4.60746   TGAAAAAGAGTAAAA               GAAAT GGATT ATTTC               GCCATCATGAGCCGG  69 373
        pykF 2383414 .. 2383429 -  -8.2  -6.15536   AATGAATAAAAAAAA              GCGCCC CGCG AGGCGC               TTTATTAAAAAAAAC 100 59
CTM43_RS11600 2382877 .. 2382895 - -14.6  -5.78622   TGAGGGCAAAAAAAA             TGGCGCAC AGA GTGCGCCA             TTTTTATTACCAGAA 100 44
CTM43_RS11555 NONE
CTM43_RS11550 2374259 .. 2374272 -  -3.8  -3.15008   GGGCACAATAAATCA               GCCT TACGCC AGGC                CACAGCACTGAAAAG  48 53
CTM43_RS11545 2372457 .. 2372470 -  -3.7  -3.14132   GCCGTTTGGCATCAA               TGCCC TGGT GGGCC                TGATCGCCCTGTCGG  45 416
CTM43_RS11520 NONE
CTM43_RS11515 NONE
CTM43_RS11510 NONE
CTM43_RS11505 2362856 .. 2362867 -  -3.6  -3.82117   CGCAGGGAGAAAAGA                GGCA TATC CGCC                 CAACCTAAACGATGA  55 30
CTM43_RS11500 2361546 .. 2361558 -  -6.2  -3.51232   CTGGCGGCAAAGTAA                GGCG GGGCG CGCC                CGTTATCTTCCCCAG  59 95
CTM43_RS11480 2358558 .. 2358578 -   -14   -4.6391   AATAAGTACATAAAA            GCTGCCGC GATAT GCGGCAGC            TTTTTTATTGCTGAC 100 67
        ydiK 2353248 .. 2353267 -   -15  -4.41616   ATGCGGGCAAAGAAA            CAGGCGGG TCTC CCCGCCTG             CCAGGCATTACTTGC 100 33
        rprA 2352908 .. 2352937 -  -6.3  -2.62184   TTCGCCCTGACAGGA       CCGATCCCCGGCA GCGA TGCCGGGGATTTT        TTTTACCGGTGTCAG  53 67
CTM43_RS11445 2349328 .. 2349347 -  -5.1  -3.67173   ACAAATTTTTAATAA            TGTACTA GTGTAT TAGTACA             TCCTGCGATTCAGCC  59 18
CTM43_RS11440 2348109 .. 2348132 - -15.2  -2.81072   GTCAGCGAAGAGAAT          TGCCCGCCGC AGGC GCGGCGGGCG           GAGCGGTTACAGGCG  95 32
        hemP 2347453 .. 2347477 - -11.3  -3.12803   GAGCCACAGCGAACA          GCTCAGCGCCG CAT CGCCGCTGCGC          GATGAGTTTATCGAC  69 352
CTM43_RS11410 2343016 .. 2343032 -  -2.1  -2.90496   CTGTGGCGCAAATTA              CTGGTGG TGG CGACCGG              CTGGATGGTCGGCGT  40 330
CTM43_RS11395 2339515 .. 2339547 -  -8.5  -3.28712   TGCGTTTGTTCATAA      CCCGATATATCCACC GCT GATAAATTTATCGGG      TTATGTCAAAGCATT  66 40
CTM43_RS11390 NONE
CTM43_RS11385 2337874 .. 2337888 - -12.8  -4.90266   TGCACTAATTAAAAA               GGCCGC ATT GCGGCC               TTTTTCTTTTCTGTC 100 46
CTM43_RS11325 NONE
        ghoS 2327289 .. 2327315 -  -2.9  -2.54387   TAAACCTGGAACTGA         CGCACAACTGA CGCTT TCCGTTGCGCT         AAAACGCACTTATTG  40 35
CTM43_RS11315 2326308 .. 2326340 -  -6.8  -4.48221   GATTAACTGATAAAA      CGCTGCGGCGGACC GGCAA GGTCCGCCGTGAAG      CTTGTTTAACGCATT  74 31
CTM43_RS11305 2325042 .. 2325058 -  -3.7  -3.21785   CCAGAAAAAGGAAAG              GGTATTT TCA AAAAACC              TTCTTATACGGCTTA  46 16
CTM43_RS11295 2323248 .. 2323267 -   -15  -3.69094   AAGCGAGCAGGCAAA            CGGCACCG TACG CGGTGCCG             TTGTCGTTTTCTCTC  95 478
CTM43_RS11285 NONE
CTM43_RS11280 2321048 .. 2321072 - -13.6  -5.47218   GGCGACGTAAAAAAA         GCCTGCCG-GG AGTA CCGCGGCAGGC          TTTTTACTGGATGTT 100 46
CTM43_RS11235 2309978 .. 2309997 -   -15  -5.60993   GCGGGGATAAAAAAA            GCCCCGTC AGGT GACGGGGC             TTGTCGCGATGCTAT 100 50
CTM43_RS11225 2308249 .. 2308264 - -10.4  -5.78622   TGAGGGCAAAAAAAA              TCCCGC CGCA GCGGGA               TTTTTTATAGCGATC 100 49
CTM43_RS11205 NONE
        purU 2303549 .. 2303559 -  -2.4  -4.96501   TTTGACAAAAATAAA                 CTGG TTG CCTG                 ATTTTTACGCGTAAC  70 74
CTM43_RS11195 2303348 .. 2303359 -  -4.4  -3.00525   GTCGGGGAAACCATA                TCAC TGTA GTGA                 ATAATGGTGGTGGGG  47 30
CTM43_RS11190 NONE
CTM43_RS11185 2303037 .. 2303047 -  -5.4  -3.72788   GGGCAGAATATAGAA                 TACC GTA GGTA                 GATTATGCTGGGCAT  59 53
CTM43_RS11180 NONE
CTM43_RS11175 NONE
CTM43_RS11170 2302415 .. 2302427 -  -6.9  -4.56597   GCTCGCCGGTAAAAA                GGCGG TTG CCACC                GCTGTGAGTTTTTCC  77 147
CTM43_RS11160 2300579 .. 2300591 -  -9.1  -2.59447   TGTCAAGCAGAAGAT                GGCGA TGA TCGCC                GGCGGCGCCTGCGGC  57 421
        narX NONE
        narL 2289691 .. 2289732 -  -6.5  -3.96148   GTGGTGGAGGATAAA CAGGGGCAGCGCG-TCTCCT CCA ATGAGATCGCCCTGGCGCTG ACCGAGCCGCTGGTC  66 79
CTM43_RS11085 NONE
CTM43_RS11080 2276112 .. 2276130 - -13.8  -5.07652   GCGCGCAAAAGAAAA             CGCCCGGC ATG ACCGGGCG             TCCGATTGCTGACCA 100 207
        chaA 2273619 .. 2273644 -   -14   -5.1861   TGCATCAGTAAAAAA         GCCTGCCGGC GTCAAA ACCGGCAGGC          TTTTTTTCGCCCGGA 100 64
CTM43_RS11030 NONE
CTM43_RS11025 2266465 .. 2266481 -  -6.5  -3.03159   GCAACGTCTGGAACA              GGGTGAC GTT GTCACCG              TAACTCAATTTCCCC  55 79
CTM43_RS11020 2265372 .. 2265385 -  -9.5  -6.02914   CGGAGATAAAAAAAA               CCCGC CGCA GCGGG                TTTTTGTGCTGGGCT 100 44
        dauA 2263195 .. 2263209 - -12.8  -3.07522   AGATGGTTGAACAGA               CCGGCG TCA CGCCGG               CAATCATCGCTTATA  76 415
CTM43_RS11000 2261166 .. 2261193 - -11.2  -2.94099   TTTGCCTATTATACA        CGGTGCGCGGCA AAAA TGCCGCACGCCA         ACGGCTTATTGCGCC  74 31
        ychF 2259932 .. 2259949 - -11.3  -6.06723   CTGGGTAAAAAAAAA             TCCACGC CGCT GCGTGGA              TTTTTTTGCGCGGTG 100 66
CTM43_RS10895 2236185 .. 2236197 -  -3.3  -3.16982   CCGAGAGCAATAAAG                CTACC TTG GGTTG                AATTCAGATATTATT  46 36
CTM43_RS10885 2235477 .. 2235496 -  -2.8  -3.87815   CTGCATTGGCAGAAA            CGA-CGCCA GAC TCGCGATCG            CGCTGGGCTGCTGTA  54 66
CTM43_RS10880 2234519 .. 2234577 -  -7.8  -3.60792   GCGGCAATCGCCAAA GATCCGGCCCGTTTCCCGCGCATGGCGC TCT GCGCCCGCCACGGCAAACCGGCGCGTTC GCGCTATCGGGTCAT  62 331
CTM43_RS10870 NONE
CTM43_RS10865 2232070 .. 2232103 - -10.2  -3.35679   GCCGGCTATCCACAA     CGCAGACCAGCTGCG GGCGA CGCTGCTGG-CGGCG     CCATCGGTCGCGTAC  69 399
CTM43_RS10845 2228414 .. 2228424 -  -4.6  -3.43288   TAAATGGCAGGAGAA                 GGCC GAG AGCC                 TGGCTCAGCTGTTTA  51 182
CTM43_RS10835 2225348 .. 2225388 -   -11  -2.53213   CAAGGCGCGAATGTA  CCAGCTGTTCCCCCGGCT GGAAG AGCGGCGGGGACAGCGGG  CGATGACCCTCTCCG  65 348
CTM43_RS10780 NONE
CTM43_RS10775 2212541 .. 2212571 - -11.7   -2.7814   AGCTATAGGCGAAAT       GCCCGGGCCAGCG ATCTG CGCCGGGGCGGGC       TATAGCGGCTGGTCC  76 25
CTM43_RS10760 2209034 .. 2209065 -  -6.4  -4.36914   CCGCCCGGCACAAAA      GCGACGCCGCTG TTCTTGTC CGGCGGCGCTGC       GCCTGCACCGGCCTG  74 116
CTM43_RS10730 2202566 .. 2202595 -    -5  -3.35073   ATCATCCTGAACCAA      CGCGGTCTG-GTAC TCCT GTACGCCG-CCGCG       TGAAAAACGAATCTG  52 229
CTM43_RS10725 2200323 .. 2200347 -  -5.5   -5.0133   CATGTGGTGAAAAAA          CACCCGGCACC GCA GGCGCCGCGCT          ATATCTGGAAACTCC  83 105
CTM43_RS10715 NONE
CTM43_RS10710 2196756 .. 2196792 -  -2.7  -4.46493   GCAAAGAGATTAAAA    TCGACGACGTGGCGGCC AGC AGCGGCACCGTCGGCTA    TGAGCTGATGTGCGC  64 91
CTM43_RS10695 2192566 .. 2192582 - -15.1  -3.95183   CGATATACAGAACAA              GGGGGCC AAT GGCCCCC              TTTGTTATTTTACTC 100 52
CTM43_RS10685 2189939 .. 2189956 -  -9.1  -3.43315   TAAACGAAAACCGAA             CCGACGCC AGA GGCG-CGG             CGGAAAATATTCCGT  69 85
        dsbB 2189315 .. 2189328 -  -9.5  -5.96219   GAGGCATAAAAAAAA               CGCCC CGCA GGGCG                TTTCATTGTGGGCTG 100 54
CTM43_RS10675 2188747 .. 2188761 -  -3.4  -4.08767   CTGACTGGCTCAAAA               GCGGCG ATG CACGGC               GAACGCATCTCCGTT  58 125
        minC NONE
        minD NONE
        minE 2185374 .. 2185396 - -10.4  -5.20216   CAGAGCATTAAAAAA           CCGGCGGCGC GTG GCGTAGCCGG           TTTTTTTTCGCGATA 100 51
CTM43_RS10615 2178342 .. 2178353 -  -2.2  -3.01712   CCTGGTGGCGGAAGA                GCTG CGCG CAAC                 GCATACCGGCGAGCA  40 81
CTM43_RS10605 NONE
CTM43_RS10600 2176166 .. 2176187 - -10.3  -3.16564   CCGCGATTTTACTAA           TAATGAGAG CGCC CTCTCATTA            TCAGTATAGCTAAGG  73 35
CTM43_RS10595 2174584 .. 2174601 -  -8.4  -5.51612   ATAGAAAAAAGAAAA             TGCGCC GTTGAA GGCGCA              TCAGGGAGATTTCAG 100 94
CTM43_RS10590 2172443 .. 2172476 - -11.7  -3.53012   TTGTCGTTCCGGAAA     CGCTGGAC-CCGATCA ATC TGCTCGGCGTCCTGCG     TCGGGCGCGCGGCAG  77 453
CTM43_RS10580 NONE
CTM43_RS10575 NONE
CTM43_RS10570 2168138 .. 2168157 - -16.4  -5.93809   TCCTGATAAAAAAAA            GCCGGGGG CAAG CCCCCGGC             GTACAGCCTGGAAAT 100 40
CTM43_RS10565 2167627 .. 2167642 -  -6.2  -3.68222   TGCTAACGGGAATAA              TATAGC GCTG GCTATA               TTTTTAAGTCATTGA  61 34
        mntP 2166531 .. 2166546 -  -5.4  -3.18274   CTGACGGGAAGTGAA              GC-GCAG GCC CTGCTGC              AGATGACGCCGTTCG  51 145
CTM43_RS10515 2161961 .. 2161977 -  -3.6  -3.29144   TGAGGCGGCGGATAA              CGGGGT TGGCG ACCGCG              GCGCTACGTCGCGAT  48 54
CTM43_RS10500 2159571 .. 2159592 - -12.3  -3.68359   CGCTGAAAACGACAA           TCCGCAGCC CGCA AGCTGCGGA            TTTTTTTTACCGTCC  88 42
CTM43_RS10475 NONE
CTM43_RS10470 2150986 .. 2151010 - -17.1   -3.9712   GCAGTTTAGCACAAA          CGCCCCGGCGC GTG ACACCGGGGCG          TGCGGTTTATCCTCT 100 80
        rsmF 2149490 .. 2149504 -  -7.1  -2.63208   CGCCAGTCAAAAAGT               GCGCA TTTTT TGCGC               GGCCTCACACCTTGC  56 30
CTM43_RS10460 2149126 .. 2149143 -  -8.4  -4.32678   CGGGGAAATAAATAA             CCCGTC TCAGGC GACGGG              TTCATTGGTGTCAGG  80 36
CTM43_RS10455 2148707 .. 2148728 -  -8.7  -3.05596   CATCGTCTGAGTGAA           CACC-TGGCG GGG CGCCATGGCG           CTATTGGCGGCGCAG  60 162
CTM43_RS10445 2146744 .. 2146764 -    -4  -4.58946   TGATAAATAAAATAA            GCAAAATC TAAAC GATTTGGC            AATTCATGCGATTAC  68 351
CTM43_RS10440 2146244 .. 2146272 - -11.6   -5.6473   ATAACATCAAAAAAA        CCGCCCTTGCCG GACAA CGGCAGTGGCGG        TTTTTTCGCTGGCAG 100 262
CTM43_RS10420 2144170 .. 2144193 -  -3.8  -3.14211   AGGTTTCGGTATCAA          TGACGCGCAGC ATG GCT-CGCTCCA          GAGCAAAACAATAAG  48 93
CTM43_RS10415 2143324 .. 2143334 -  -6.8  -3.04144   TTCCCAGGTGCAATA                 CTGG GAG CCAG                 CTAAATGGGTGGCGA  54 214
CTM43_RS10395 2138833 .. 2138857 - -13.6  -3.65046   CCTCCAGGTCAACAA         CCCGGTCTGCG GCAA CGC-GACCGGG          TTTTTTTGTCTTTAC  93 37
CTM43_RS10370 2134295 .. 2134316 -  -3.1  -2.86676   CTCATCAATGGAAAC           GATTTCA TTAATGGG TGAAATC            ATTGGGCGTTTTAGC  42 11
CTM43_RS10365 NONE
         pyk 2131782 .. 2131820 - -13.5  -4.56597   GCTGTTCCCGAAAAA  GAAATAAAAAAAGCCTCC GTCA GGAGGC-TTTTTTATCTC   TACCGTGCTTACTCG 100 34
        znuC NONE
        znuB 2126683 .. 2126698 -  -6.8  -2.76696   GCCGCGGGGAAGAAT              GGCGACG GTG CG-CGCC              TGGAATCATTTCGGG  51 128
CTM43_RS10300 NONE
CTM43_RS10295 NONE
CTM43_RS10290 2119362 .. 2119374 -  -3.3  -2.68667   GAAAAAACGAAAACG                GCGTA TTG TGCGC                TAACGGAGGGAGAAA  42 25
        cmoA NONE
        cmoB 2117090 .. 2117119 -  -2.7  -5.52384   CGCGGATGAAAAAAA       TAATGGCC-GCGGC CGG GCCGCTGGCGGTGA       CCTTTCATCGCGCGT  85 496
CTM43_RS10265 2114123 .. 2114145 -  -9.9  -4.63486   AGGCGCCGAATAAAA          CTAACCCGGC TTTC GCCGGGTT-G           CTTGTTACATACGCT  91 30
        uspC 2110567 .. 2110586 - -12.2  -4.26903   CCTAGTTCAGGAAAA            GGGCTAAC CGGC GTTAGCCC             TTTTCAAGGGAAACC  95 19
CTM43_RS10215 2103202 .. 2103234 -  -6.8  -4.26871   TAATGGATTAATAAA     CCGGGCGGGGCAGCG CAGA CGC-GCTCCCCCTGG      CAGAGCGATAAAGGC  71 45
CTM43_RS10205 2101416 .. 2101440 - -18.5  -2.78266   AACGCATTAATACCA          GGCCTCGCCGG ATA CCGGCGGGGCC          TTCTTCTTTAATGGG 100 33
CTM43_RS10195 2099295 .. 2099321 -  -5.8  -4.58395   TTTATCTTTGAAAAA         GCCTTTACCG GCCGCAA CGGCGAAGGC         TATCCGCCGGAGCGC  75 291
CTM43_RS10185 NONE
CTM43_RS10180 2097895 .. 2097909 -  -5.7  -5.36441   TTTTTAGAGAAAAAA               GGCAA ATTTA TTGCC               AGAGAGGAAGGTTTT  93 109
        tyrP 2096295 .. 2096310 - -11.8  -3.90425   TAGCGAAATGAACAA              GGGGCC AGCA GGCCCC               TTTTTTATCCCACCG  88 30
CTM43_RS10120 2089889 .. 2089914 -  -7.5  -2.62192   GCTGACTGAACTAAG         CTTGCTGACGC TGCT GCGTCTGGAAG          ATGAGATGGTGATGC  50 308
CTM43_RS10090 2084000 .. 2084027 -  -9.8  -3.53343   AAGGCGTGGGCCAAA        GCGCGAGCGACGG GGC CCGTCAG-CGCGC        CGGCCTCCACGCGCT  74 84
CTM43_RS10080 2082589 .. 2082607 - -11.7  -3.36823   TCTCGTAAAACTGAA             CTGGCGG GAGCG CCGCCAG             TTTGTTTCAGCGCAT  82 32
CTM43_RS10070 2081781 .. 2081798 -  -5.5  -3.64609   GAGAATTATCTTAAA             GTGATCG CAGG CGATCGC              GCTATCGAATGAAAC  59 262
        yedA 2077733 .. 2077770 - -12.7  -4.36914   TCTGGCTGGACAAAA   TCGCCGGTAACGTGGCGC GCG ACGCC-CGCGACCGGCAA   AAGCTGGCCGAAGAG  93 189
CTM43_RS10030 2074550 .. 2074564 -  -5.8   -4.5081   AAATATGTAAATAAA               TAATGT TAA ACATTA               CAAAATATTTCTAAG  75 290
        ompC 2073264 .. 2073280 - -10.8  -5.47159   CGGGAACATAAAAAA              GCCCGC TGAAC GCGGGC              TTTGACGGGGATCAG 100 37
CTM43_RS10015 2071940 .. 2071951 -  -4.4  -3.35278   TGAACTACAGAGGAA                TCGT GTGA ACGA                 GGCGCATACTACTGG  50 113
CTM43_RS10010 2071827 .. 2071852 - -19.1  -5.00138   CACGGAAAGCAAAAA         TCCCGCTCAGG TTTC CCTGAGCGGGA          TTTTTAAATTTGGCT 100 36
CTM43_RS10000 2069622 .. 2069639 - -11.3  -3.61398   CGTTGTTGGGAATAA             GGATCGG GAAA CCGATCC              TTAACTTATCAATAG  79 309
CTM43_RS09980 2066116 .. 2066133 - -11.3   -5.0925   GCTGAAAAGCAAAAA             GCCTGCT CGAA AGCAGGC              TTTTTAAATTTGGCT 100 36
CTM43_RS09970 2063136 .. 2063148 -  -3.4  -2.71268   TTTCATGACAGAGTA                TTCC TCGTC GGAA                GGGGGTTATCGGCGC  42 0
CTM43_RS09965 2062075 .. 2062085 -  -6.8  -3.40403   TTCGCGTCATCATAA                 TCCC GTG GGGA                 AGGAAATGATATGCC  59 89
CTM43_RS09960 2060728 .. 2060754 -  -7.2  -3.13403   CGGTGGTGACCAACA         CGACGGCGCACA CGC TGCAGACCGTCG         CCCGGACCACGCTGG  60 367
        pmrD NONE
CTM43_RS09945 2057310 .. 2057327 - -11.3  -3.78234   AGCCAAATTTAAGAA             GCCTGCT TTCG AGCAGGC              TTTTTGCTTTTCTGT  81 159
CTM43_RS09930 2055352 .. 2055362 -    -4  -3.23853   CCTGTTGAACCAACA                 TCAT ATA ATGA                 TTCGCAAGGATGCAT  48 54
CTM43_RS09925 2053930 .. 2053955 - -14.7  -4.57482   TTACTGATAAATAAA         GCCGTCCCCAC CTAA GCGGAGACGGC          TTCGTTATACTAACA 100 43
CTM43_RS09920 2051789 .. 2051808 - -13.6  -5.24129   TGTTGCCATAAAAAA            TGGTGCCC AAAA GGGCACCA             GATGCATCAGGTACC 100 32
CTM43_RS09915 2050781 .. 2050809 -    -9  -3.33009   CAAAAGGTGCTAGAA        CCCATTCATGAA GCCAG TTCATGAATGTG        TAGCCTCATGTTGCC  69 15
CTM43_RS09910 NONE
CTM43_RS09905 NONE
CTM43_RS09900 2047619 .. 2047643 - -15.9  -4.03204   TATTAAAGCCAGAAA          GTAGATCTGCT ATC AGCAGATCTAC          TATGAAAGGCGTTGT 100 56
CTM43_RS09860 NONE
CTM43_RS09855 2037892 .. 2037912 -  -3.9  -3.33009   CAAAAGGCTCCAGAA            GCCAGCTCA TGA TGACCTGCC            TTTATCTTCATATTC  50 11
CTM43_RS09850 NONE
CTM43_RS09845 NONE
CTM43_RS09840 2034917 .. 2034938 -  -5.1   -4.2828   CCGCAGGGAGTAAAA           GACATAACG ATAA CGTTACGGC            CGGAAAGTATTAGTG  67 482
CTM43_RS09810 NONE
CTM43_RS09805 2029185 .. 2029196 -    -3  -3.75824   TACGTTATAACATAA                CAAT TGAT ATTG                 AAATTTTTTACATCC  51 52
CTM43_RS09800 NONE
CTM43_RS09795 NONE
CTM43_RS09790 2026097 .. 2026127 - -18.4  -2.71745   GTTCGAAGAATGAAT       CGAAGGCACCCG CATTTGT CGGGTGCCTTCG       TATGAAAGCGAAAAG 100 50
CTM43_RS09775 2023679 .. 2023698 -  -3.5  -3.59233   CAATTATGAAAGCAA            CCGACAA TCCTTG TTGACGG             TTATATTTATTATAG  50 127
CTM43_RS09760 2021130 .. 2021149 -  -2.8  -3.09834   CACTCCATTATCGAA            CTAACCTG ACCC CAGATTTG             ACCACCAATTTTTCC  45 383
CTM43_RS09750 2019790 .. 2019808 -   -11  -3.60814   AAAGTCTATATAGAA             CCACCTCC TGT AGAGGTGG             TGGTAATTTGCCAGA  79 61
CTM43_RS09725 2012265 .. 2012295 - -21.3  -3.93658   AACAGGCGGAAAGAA       CAGAGGCCCGGAT GGGGT ATCCGGGCCTCTG       TCAGGGAGGAGTTTA 100 58
CTM43_RS09715 NONE
CTM43_RS09710 NONE
CTM43_RS09705 NONE
CTM43_RS09700 1992913 .. 1992925 -  -4.9  -3.70033   AATTGAAAATGATAA                CTATT TCT AATAG                TGGTGCTACCCGAAA  57 77
        fyuA 1990793 .. 1990813 - -11.2  -4.08945   ACTAGTGGTGTAAAA            GGGATACC TTTTC GGTATCCC            TTTTACAATAATCAG  87 37
CTM43_RS09685 1988986 .. 1988998 -  -4.8  -4.21676   ATAAGGGATGCAAAA                CCCT TATTT AGGG                TTGTCGGCCATTACA  64 54
CTM43_RS09680 NONE
CTM43_RS09675 NONE
CTM43_RS09670 NONE
CTM43_RS09665 1987700 .. 1987725 - -10.5  -4.34402   TGGTGCATATTAAAA         TGTGCGGAG CTATTCTC CTCCGCACA          TACAGATTTAACGTC  90 33
CTM43_RS09660 1987357 .. 1987368 -  -4.4  -4.25873   GTTGCATAAAAAACA                CAGA GTTA TCTG                 ACATATTTCCAGACA  62 19
CTM43_RS09655 1986510 .. 1986535 -  -6.1  -2.72559   TCAGTAAACAAGTGA         CATGCAGGGTC TGCT GATACTGCATG          CTGTGGGAACAGAAT  51 50
CTM43_RS09650 NONE
CTM43_RS09645 NONE
CTM43_RS09640 NONE
CTM43_RS09635 NONE
CTM43_RS09630 NONE
CTM43_RS09625 1980617 .. 1980642 -  -9.3  -3.08298   CAACTAAATTAGATA         TATGAAAATAT AATT ATATTTTCATA          TGATGATATTTCGGG  66 64
CTM43_RS09620 NONE
       virB9 1978851 .. 1978868 -  -4.3  -4.82901   TTCCTTTTATAAAAA             TATAAAA ATAT TTTTATA              GGTTAATTGGATTCC  71 28
CTM43_RS09610 NONE
CTM43_RS09605 NONE
      virB11 NONE
CTM43_RS09595 NONE
CTM43_RS09590 NONE
CTM43_RS09585 NONE
CTM43_RS09580 NONE
CTM43_RS09575 1974423 .. 1974469 - -28.4  -2.52676   GATGGGGTCAAGTCA TGGAGTCATCGCATGGAGTC GCAGCTT GACTCCATGCGATGACTCCA TCAAATGACTCCATA 100 26
CTM43_RS09570 NONE
CTM43_RS09565 1971363 .. 1971376 -  -2.3  -3.83561   CGTGGTGAAAAAAAC               GTCCC CGGT GGCAC                ATCTTCCCTTATGAA  52 516
CTM43_RS09465 NONE
CTM43_RS09460 NONE
CTM43_RS09455 1919808 .. 1919820 -  -2.7  -4.43681   GACGGAATATGAAAA                TCAAT ATT ATCGA                CGGCTCAGAAGTGTC  62 59
CTM43_RS09425 1916299 .. 1916320 - -11.5  -2.73875   TGTTCGCCAATACCA           GCCGCCACG ATGC CGCGACGGC            GATGGAGACGCTCAG  66 209
CTM43_RS09405 1912466 .. 1912478 -  -5.5  -2.71364   GGAGGCCGTTAATGA                CCTGC TGA GCAAG                TTGCCGGACGACAGG  47 226
CTM43_RS09375 NONE
CTM43_RS09370 1906726 .. 1906738 -  -5.5  -3.72027   ATTCGCCACCAATAA                CAGCG AGT CGCTA                CGTGATGCAGTGCTG  58 231
CTM43_RS09360 1905456 .. 1905494 -  -8.6  -2.52623   GTTGCTGGAGAATAT   CGAGCAGCAGGCGCGGCA GCG TATCGCGACGGCAGCCCG   CCGCTAAGGGTGTAC  60 54
CTM43_RS09350 1903428 .. 1903455 - -12.7  -4.13767   GTCCTGATGGTAAAA        CGCATCGTCCC GCGATG GGGGCGATGCG         CCGGGTTTACAGGGC 100 32
CTM43_RS09315 1895986 .. 1896023 - -10.5   -2.6652   GAAAAGCTAAGCAAC   GT-TCCCGGGTGCGACGC GAG GCGTCTTACCCGGGCTAC   TCTGGTACCAGCGCC  69 205
CTM43_RS09305 1893166 .. 1893195 - -15.1  -3.96216   GCGTGATGTAAATAA       GAAAAGCCGGAGG GAAA CCTCCGGCTTTTT        TTTCGTTTGGCTCGG 100 157
CTM43_RS09280 1889426 .. 1889452 - -19.5  -5.75342   TTGGTCCAAAAAAAA         GCCCCCGGAAG TGAAT CTTCCGGGGGC         TCTCTGCGCGTTCAT 100 65
CTM43_RS09275 NONE
        hisD NONE
CTM43_RS09265 NONE
        hisB NONE
        hisH NONE
        hisA NONE
CTM43_RS09245 NONE
CTM43_RS09240 1882298 .. 1882317 -   -10  -3.48558   AGAAAGAGTAATTAA            TGGCGGCT TTAT AACCGCCA             TGTCTTATATTACCT  74 35
CTM43_RS09235 NONE
CTM43_RS09230 NONE
CTM43_RS09225 1879282 .. 1879306 -  -7.8  -3.07222   ATGATTACTGTAATA          GCGCCCCCAT AAAAA ATGAGGGCGG          CATAGAAATTACTAA  60 37
CTM43_RS09185 1869236 .. 1869261 - -11.9  -2.58822   GGTTCCATAGAAGAG         GTGCCGCAATC TGAC GATTGCGGCAG          GGCATGGGGACTAGA  75 36
CTM43_RS09180 1868573 .. 1868587 - -11.4  -4.68908   GGGAGGTAAAACAAA               GCCTGC AAC GCAGGC               TTTTGTTATTTATGT 100 447
CTM43_RS09085 1841502 .. 1841529 -  -9.2  -2.54896   TCGCCACTTAATGTA        GGCCTGATAAGCG CAG CGCT-ATCAGGCA        GTGTGGCAGCTACGC  63 195
CTM43_RS09060 1835463 .. 1835488 - -12.5  -3.14564   CCAGCCTGCCAGGAA         CTGCGG-CCGGC AAC GCCGGACCGCCG         CGAAGATCGCAGACA  82 253
CTM43_RS09055 NONE
CTM43_RS09050 1832599 .. 1832612 -  -4.5  -3.83868   TAGCAATAAAACTAA               CCACG TTTG CATGG                CCATCGTTTTTACCC  59 267
CTM43_RS09045 1831524 .. 1831545 - -12.3  -4.19215   CACACGGAAAAAAGA           CCCCTGACA GGCA CGTCAGGGG            CAATGTGACGAAGTA  95 229
        mdtA 1828656 .. 1828666 -  -6.8  -3.08679   GGCCTGGAGGTAACA                 CCTG CAT CAGG                 AACGCGCTCCGTGTT  55 21
        mdtB 1825525 .. 1825546 -  -2.2  -2.59569   GCGGTAAATGAAGAG           GGCGAAAA ACTTCA CTTACGCC            TCCTCTTCCTGACGC  39 19
CTM43_RS09025 NONE
CTM43_RS09020 NONE
        baeS NONE
        baeR 1818845 .. 1818861 -  -6.5  -4.09685   CGCGAGCCGGGAAAA              GGCTAAC TAC GCCAGCC              GGCAGGCGTCCGCTT  68 15
CTM43_RS09005 1817007 .. 1817038 -  -9.5  -5.50499   GGAGAGGCAAAAAAA      TAAGCCCGCGTAA GGGAGA TTACGCAGGCTAA       GGAGGTGGTTCCTGG 100 158
        yegS 1815831 .. 1815851 -  -3.9  -3.54459   TTAATCCGCGGGAAA            GGTTCAGGG GGG CGCCAAACC            GGTTTTTTTGCCGGG  52 206
CTM43_RS08975 1809351 .. 1809365 -    -7  -3.59979   CCCGGCTATTCGAAA               GGCCAC GTT GAGGCC               TGTCTGCAGGAGCGG  60 345
CTM43_RS08965 NONE
CTM43_RS08960 1805970 .. 1805997 - -10.6  -2.64243   TCAGAGTGCAGATGA        GTGTCTCCGCTGC ATA GCAGCGGAG-CAT        TATTGTTATAAAATA  69 51
CTM43_RS08955 1804608 .. 1804627 -   -15  -4.78149   TGCATAAGGCAAAAA            TCCGGGCG TCAC CGCCCGGA             TTGCTCGTTGTTTGT 100 56
CTM43_RS08935 NONE
CTM43_RS08930 1800600 .. 1800613 -  -2.4  -3.30443   TCACGATCAGACCAA               CGAT GCGCTT ATCG                AGGCGCTGCAGCGCG  44 501
CTM43_RS08920 NONE
CTM43_RS08915 1796734 .. 1796744 -  -5.4  -3.86897   GGCATTGCCTATAAA                 TCGA TGC TCGA                 CGTCAGCGACGATCT  61 181
CTM43_RS08905 NONE
CTM43_RS08900 1794887 .. 1794899 -  -9.1  -2.99719   CCGAGAAATACCACA                CCCAG CTG CTGGG                CCAGCTGCCGCTGCA  59 200
CTM43_RS08890 1791755 .. 1791773 - -14.6  -6.06723   CCGGGCAAAAAAAAA             GCCGGAGA TAC TCTCCGGC             TTTTTTGTTATTTCA 100 33
CTM43_RS08870 1788173 .. 1788185 -  -3.3  -2.57344   CAGCGTCTGTATAAG                GTGGA GCT TCCGC                TGGCGGCCCCGGTGA  40 242
CTM43_RS08840 1780283 .. 1780305 -  -4.1  -2.80761   AGCGTAATACAGAAG          CGCCAGG-CT GAAT AGTCCTGCCG           TCGATTATTGCGGAT  45 30
CTM43_RS08835 1779381 .. 1779397 -  -3.5  -4.87665   GCTGAGCTATAAAAA              GCAGCGC GAA GCGCAGA              TGGCGGAGGCGATGC  76 298
CTM43_RS08820 1776974 .. 1776995 - -12.9  -2.73721   AGTAACCGCCAACCA           CGGTGCGCC CGCG GGCGCGCCG            CTTAGTCTTTCTTCT  81 27
CTM43_RS08810 1774632 .. 1774659 -   -14   -2.9587   TGAAAGCCTAAAGGA        TGCCCGCCCGGC CATC GCCGGGCGGGGG         GTTAGCCCGGTTTAC  90 27
CTM43_RS08780 NONE
CTM43_RS08775 1766106 .. 1766119 -  -5.3  -3.68256   GTTGCATTAAAAAAT               GTGAT TTAA ATCAC                TATTAACCTACCACT  59 28
CTM43_RS08770 1765062 .. 1765080 -  -2.3  -4.87786   CTAACGGTATAAAAA             GTCGGCC GGATA AGCCGAA             GACGCCGTCCGGCAA  70 55
        sanA 1764066 .. 1764082 - -15.1  -4.77157   TGAACGCATCAAAAA              CCCGCGC CTG GCGCGGG              TTTTTTTATATCTGA 100 61
        fghA 1755738 .. 1755764 - -22.4  -3.03124   CTGTAGGCCTGAACA         TGCGCCGCGAAG CAG CTTCGCGGCGCA         TTGGCGTTTAGCCAA 100 33
CTM43_RS08720 1753252 .. 1753269 - -11.3   -4.3739   GATTGTGCGATAAAA             GCCCTCT CTGA AGAGGGC              TTTATATTGCTGGCA  91 254
CTM43_RS08695 1749336 .. 1749385 -    -3    -5.626   TATTTCATAAAAAAA CTCCAGTTAAAGCCGCTGG GGGGTGGGTAATG ATAGCGGCTT-AACTGGAG AAAGATGTAGTGCTT  85 40
CTM43_RS08690 1748441 .. 1748458 - -12.7  -5.46657   TACCGCAATAAAAAA             GGGCCGA CTGT TCGGCCC              TTTTTTTGTCTCTAT 100 41
        setB 1742718 .. 1742733 -  -3.2  -2.96807   ACGAGTCAAAAATAT              CGCGTA AAAC TACTCG               CGCCCGGGCGTTCAG  45 416
        yeiP 1742064 .. 1742081 - -11.3  -5.18726   TGGGGATAATAAAAA             GGACAGC CAGC GCTGTCC              TTTTTTACTGTCGAA 100 54
CTM43_RS08645 1739126 .. 1739166 -  -6.8  -3.95836   AGGGGGAAAAGAGAA  GTCCTGAGGCGGACAGAA GAGAA TTCTGTCCGCATAAGCGC  AAATATTGTTAAGAA  66 34
CTM43_RS08640 NONE
CTM43_RS08635 1737274 .. 1737290 - -10.1  -4.87318   GGGAAAATGTAAAAA              GGGACCC AAA AGGTCCC              CTTATAGTTAATGAC 100 61
CTM43_RS08630 1736262 .. 1736278 - -12.3  -6.06723   GGTGGCAAAAAAAAA              CACTGCC TGG GGCAGTG              TTTTTTATCCCGCAG 100 77
CTM43_RS08625 NONE
CTM43_RS08620 NONE
        yejB NONE
CTM43_RS08610 NONE
        yejF 1728497 .. 1728522 -  -3.3  -5.24129   GCCGGGTATAAAAAA         TAAAGCGCT GGATTATA AGCGCTTAA          CCCTGGTCCGCCGCC  79 488
CTM43_RS08585 1724373 .. 1724400 -  -9.8  -4.12532   CTCTCTATATATAAA        GCCTGCTACAGG CGAC CCAGCAACAGGC         GGATTATCTGCTTTG  81 113
CTM43_RS08580 1724014 .. 1724040 - -19.4  -4.84311   GCGCAGATAACAAAA         CGCCCCGGAGCC TGA GACCCCGGGGCG         CTTGCCATACAACTT 100 52
CTM43_RS08570 1721390 .. 1721405 - -10.4  -3.28712   CGGGCTGTTGGATAA              CGCCTC GCCG GAGGCG               CGGATCGTTGCCGAA  68 350
CTM43_RS08560 1719837 .. 1719859 -  -5.4  -3.39668   CGCCAAAGCGCAGAA           CCGCGGCCTA CTG CAGGCGGTGG           ATGACTTCGCCGCCG  53 437
CTM43_RS08550 NONE
CTM43_RS08545 1717017 .. 1717029 -  -4.7  -3.18274   CCCAGGCGAATGCAA                GCGGG TCA CGCGC                GATTGATTCATAATT  50 47
CTM43_RS08540 1716865 .. 1716882 - -11.3  -5.65177   ACAGGCATAAAAAAA             CCAGCCT TAAA AGGCTGG              TTTCTGTGGAGTTTT 100 41
CTM43_RS08535 1715569 .. 1715591 - -14.8  -3.09785   GCAGAGCGCAACAGA           GGCGCTGGCG GGC CGCCAGCCCC           CTGCCGGGAAAGCTA  91 38
CTM43_RS08530 1714890 .. 1714909 -   -15  -4.83169   ACGCTCTGACAAAAA            CGGCAGCC TGCG GGCTGCCG             TTTTTTATTGCCGTT 100 54
CTM43_RS08520 1711404 .. 1711422 - -11.8  -2.73468   CAACACCGGCAACCA             GACGATCA CCA TGATCGTC             CGGGCGATGGCGCTG  70 321
        rcsD NONE
        rcsB 1700268 .. 1700307 -  -4.8   -3.6279   AAAGGGCGGGAATAA  TGGGGAGCTCCGTCTCGC CGGG GCGAGACGGAGAGGGCGA   AGAGATTACTCTTTG  57 31
        atoS NONE
        atoC 1694027 .. 1694041 -  -4.2  -4.09685   GCGCACTGTGCAAAA               TTCTGC ATA GCAGAT               TCTGGTACTAAAGGC  60 33
CTM43_RS08460 NONE
CTM43_RS08455 NONE
CTM43_RS08450 1691209 .. 1691223 -  -4.2  -3.06569   TTAATTCCTTAAAAG               TGAGGG GGG CCGTCA               GAACAAGGTCAAACC  47 23
CTM43_RS08445 1689923 .. 1689939 - -13.7  -3.51365   TGATATCGCACAGAA              GGGAGGC CTG GCCTCCC              TTTTTTTCGTTCTGA  91 94
CTM43_RS08435 1686336 .. 1686364 -  -9.6   -4.1822   CTTCATCGGAAGAAA        TAATCACGCGGC TTGAT GCCGCGCAATCA        TCATAAGCGGAGGTG  83 47
CTM43_RS08430 NONE
CTM43_RS08425 1683720 .. 1683747 - -10.6  -2.73529   GCCTACACAAACGTA        GGCCGGGTAA-GC GTA GCGTTACCCGGCA        AAAATACCTTAGATC  69 34
CTM43_RS08420 NONE
CTM43_RS08415 1681812 .. 1681839 -  -9.9  -4.93696   GCGAAACACTAAAAA       GCCGGGT--GGCG GCTA CGCCTTACCCGGC        CTACGGTCTGTGCGG 100 456
CTM43_RS08395 NONE
CTM43_RS08390 NONE
        glpC 1674846 .. 1674880 -  -6.4  -2.66964   TGATCGAGCAGAGCA    TCCGG-CGCATTCGC GCGGCG GGGAAAGCGGCCGGA     TTTCTGGCGGTCGAC  48 209
CTM43_RS08350 1668127 .. 1668145 - -10.2  -2.87051   CCCGGACGATGAAAT             CATGCGCC ACC GGCGCGTG             GCGATGCTGGAGCTG  64 523
        nudI 1666939 .. 1666962 -  -5.2  -5.12707   GGAAACGTTAAAAAA          CGGCGGGA TTAAGATT TCGCGCCG           GGCGCTGTGCGAGTG  86 130
         rnz 1658396 .. 1658410 -  -8.5   -5.4833   TGACTCAATAAAAAA               CCGCC GGGAT GGCGG               TTTTTTTATGCCCGG 100 44
CTM43_RS08220 1639666 .. 1639677 -  -7.2  -2.78679   CCGCCGGATGCAAAT                GCCG GCGG CGGC                 GCGATTAAAGCTGAT  57 30
CTM43_RS08215 1638961 .. 1638998 - -13.4  -3.06696   TTCCGTTTTAAGATA   TTCTGGCCGGGTAGAG CACAAC CGCCGCCCGGCCAGAA    CCTTACAGCGGCGAA  86 28
CTM43_RS08190 NONE
CTM43_RS08185 1631409 .. 1631426 - -12.7  -4.91109   TCCTGACGACAAAAA             GGCAGCC ATTC GGCTGCC              TTTTGCTTTGACCAC 100 50
CTM43_RS08165 1628666 .. 1628680 -  -2.7  -4.42721   CAATCATACAACAAA               GCGCG ACGGG CGAGC               AGGGGGTTAATAAAG  62 32
CTM43_RS08160 NONE
CTM43_RS08155 1627318 .. 1627335 -  -9.1  -2.80779   AGCAGAATGGAATCA             GAGGAGC CAAT GCTCCCC              TGTGTCAGCCATTAA  65 37
CTM43_RS08150 1626524 .. 1626539 -  -3.2  -4.02005   AAAATTGAAGAAGAA              GGGCAT CCGG ATGCGC               TGTTTGGCGCGCCGA  58 90
CTM43_RS08070 1611067 .. 1611098 -  -9.2  -3.13164   CGTGGAAGTAGTGAA      GCGCGTCCCGGCGC AGGT GCGCGGCACCGCGC       TCGGCGGCTATGCGG  64 270
        mnmC 1606080 .. 1606096 - -11.5  -3.81689   AACACTATTATCAAA              CGCCGCC ATT GACGGCG              GAACACTTTCCGTGG  81 433
        smrB 1601130 .. 1601141 -  -5.8  -3.09492   CCTGCAACCTCAAGA                TGGC CAAC GCCA                 TCTGACGGCCCCCCG  53 51
        fadL 1594815 .. 1594835 - -14.1  -5.71983   CGAATGATAAAAAAA            GGGTGAACA TAA TGTTCACCC            TTTTTTGTGGCGCGC 100 47
CTM43_RS07980 NONE
CTM43_RS07975 NONE
CTM43_RS07960 1587636 .. 1587655 -  -7.8  -3.87994   ATTCATTCTGATAAA            GCCAAGTC ACAT GGCTTGGC             TTCAGATATATTGAT  70 40
CTM43_RS07935 NONE
CTM43_RS07930 NONE
CTM43_RS07925 1581612 .. 1581638 -  -4.5  -3.05384   TGCCTTGGGAGGGAA         TAAGGGGCT GGGAAATTT AACCCCTTA         TAGAGTTGTTATGCC  49 374
CTM43_RS07890 NONE
CTM43_RS07885 1575726 .. 1575736 -  -2.6  -3.09327   CTATTTTATTTAATA                 TTAT ACT ATAA                 TTTTTTCAGTCATGA  43 31
CTM43_RS07880 1575419 .. 1575440 - -13.7  -3.59979   CCTTTTCACTGTAAA           CCCCCGTCC TAAT AGACGGGGG            ATGCCTATTTTAGTA  91 35
CTM43_RS07870 1574644 .. 1574688 - -10.2  -5.00846   CAAAGAGCAGAAAAA GCAAG-GC-AACTTAGAGAAGC GGA GCATCTCTGAGTTAGCTCTTGC TTTTTATAATTAATG 100 49
CTM43_RS07865 1573684 .. 1573703 -  -9.2   -5.1675   TTATTCATTAAAAAA            CAAGGGCC AAAA GGCCCATG             TAAAATTAGTTCCAT 100 31
CTM43_RS07860 NONE
CTM43_RS07855 1571843 .. 1571857 -  -2.2  -3.61178   TTGACTTATCCTAAA               TTTACT ACT AATAAA               ATGATATTGCTGTCA  47 63
CTM43_RS07850 NONE
CTM43_RS07845 NONE
CTM43_RS07840 1570597 .. 1570612 - -10.4  -5.12068   TATAGGCAATAAAAA              GCCCCT ATGC AGGGGC               TAAAAGAGACTTCTC 100 51
CTM43_RS07795 NONE
CTM43_RS07790 1561992 .. 1562017 -  -6.9  -3.15544   GGCTACCTGTACCAA         CGTCCGCTCCTG GCA CAA-AGCGGACA         CTCATTCCAACATAC  57 352
CTM43_RS07780 1560255 .. 1560265 -  -5.4  -2.63079   CCGGCACATAACTGA                 CGTT ATG AACG                 GTGCCCTGTGAAGCT  48 17
CTM43_RS07770 1558736 .. 1558757 -  -2.4  -3.51232   TCCTTGGCAAAGGAA           TAAGATAA CTTTCT TCATCTTA            TGATGTCCATGGTAA  47 287
CTM43_RS07765 1558106 .. 1558122 -  -2.9  -4.20696   GCACTAAGTGGAAAA              CCTCTTG GAA CAGAAGG              TCTGTAATGAGCGAG  59 48
CTM43_RS07705 1548071 .. 1548089 - -12.4  -3.85704   GCAGGAAGTATCAAA             CAGACGCC TGC GGCGCCTG             TCGAAGCTACCTGTA  91 42
CTM43_RS07700 1546707 .. 1546732 - -11.9  -3.07816   TGGCGATTGAGCTAA         GACC-TGCGCTG CTG CAGCGCACGGCC         TGTTTATTGCAGCGG  73 149
CTM43_RS07690 NONE
CTM43_RS07685 1544117 .. 1544143 -   -13  -2.92246   GGAAGGCCAACGAGA         GCGCGCGGCA TTATCTT TGCCACGCGC         CGCCGTCGGTTCAGG  83 36
        ypdK 1543702 .. 1543721 - -10.7  -5.46706   ACGGCAAAATAAAAA            CGGGAGC ATGAAG GCTCCCG             TTTTTTTTGACACCG 100 45
CTM43_RS07670 1542119 .. 1542130 -  -2.2  -5.34555   GGACATGATAAAAAA                CCTG ACGG CAGA                 AGACCAGCCGTGGAA  76 80
CTM43_RS07665 1540390 .. 1540403 -  -3.1  -3.27475   CCGCTCATGACAACA               GC-GAC TCC GTCAGC               GCCTGCGGCGTAGAG  47 1
CTM43_RS07660 1539519 .. 1539533 -  -7.1   -3.4072   GATCGTGCATGATAA               CCCAG GCCTG CTGGG               CTCCGGCGCGCATCT  58 122
CTM43_RS07650 1536718 .. 1536729 -  -7.2  -3.86897   CCTATGGCGCACAAA                CCGC GGCG GCGG                 AGCGGCGGGTGGTGC  66 408
CTM43_RS07640 1534202 .. 1534219 -  -6.2  -2.64794   GTTAACCTGATATTA             CGGGCC GGTAAA GACCCG              CCGCATCGGACGAAC  51 87
CTM43_RS07635 1533762 .. 1533791 - -16.5  -4.16842   CTGATGCTGAATAAA       GTAAAGGGGAGCC GATG GGCTCCCCTTTTC        GTTTGTTAGTGATGG 100 31
CTM43_RS07625 1530914 .. 1530930 - -15.1  -5.76949   GACGGGCAAAAAAAA              GCCGGGC ATT GCCCGGC              TCAGATGACTGACGT 100 44
CTM43_RS07605 NONE
CTM43_RS07600 1527327 .. 1527344 - -12.7  -3.94188   ACGCAGCTGAAACAA             CGGCAGG TTAC CCTGCCG              TTTTTTTTGTCTGTT  93 39
CTM43_RS07585 NONE
CTM43_RS07580 NONE
CTM43_RS07575 NONE
CTM43_RS07570 1525204 .. 1525220 - -10.8   -4.8048   CGCGCATAGCAAAAA              GGCGCC TTTAG GGCGCC              TTTTTACATTGGTGG 100 35
CTM43_RS07560 1522976 .. 1522999 -  -8.1  -3.81488   GTTCGGTAAATACAA          GGGACGTCG CTTAAT CGATGTCCC           GGAAGAGTATTTATT  68 158
        cysZ 1518738 .. 1518759 - -15.1  -3.50715   ATAAGCGCGATATAA           GGGAGCGGC CTTT GCCGCCCCC            AAGTGAAGGTGTTAC 100 43
        cysK 1517585 .. 1517600 -  -6.8  -5.24129   GTGTGCCACAAAAAA              GCACCC GAAA AGGTGC               TTTTTTACACATTAT  91 54
CTM43_RS07530 1516979 .. 1517002 -  -4.5  -4.81551   GACTGATATGAAAAA          GAACCCGTG AACTTA CTCGAGTTC           AGCCATCAGTTTAAC  73 14
        ptsI NONE
CTM43_RS07520 1514632 .. 1514649 - -12.7  -5.93809   GCGGTATAAAAAAAA             TGGCGCC TTTC GGCGCCA              TTTTTATGCAGCAAG 100 43
        ptsJ NONE
CTM43_RS07500 1511170 .. 1511181 -  -4.4  -3.53444   CCACCGGGCCGGAAA                TCTG GCAG CAGA                 CCGCGGGGCGTATCA  53 450
        amiA NONE
CTM43_RS07440 1501571 .. 1501597 -    -5  -3.85698   CTGTTTGCTGAGAAA         CCGTCGATGACG CTG CACCATCGCCTG         CGCCAGTGGGTGTGA  59 84
         tal NONE
         tkt 1480450 .. 1480479 - -13.5  -3.12668   CGGCAAAGGGGAAGA       GCCGCCGCTCAGCG TAC CGCCG-GCGCCGGC       GCTGCGCGCGGTGGC  79 520
CTM43_RS07320 NONE
        acrD 1473694 .. 1473712 - -14.6  -4.21954   TGAACACATAAAGAA             GGCGACCA CCG TGGTCGCC             TTTTCTGTTATTACG 100 64
CTM43_RS07305 NONE
CTM43_RS07300 NONE
CTM43_RS07295 1471429 .. 1471457 - -13.2  -2.81768   TGATATCATCGAAAT        GCTGTAACCCCG GAGAG CGGGGTTACAGG        CGGGCGGTACCGCGA  85 52
CTM43_RS07260 NONE
CTM43_RS07255 1463560 .. 1463591 - -21.6  -5.89921   ATGAGAATAAAAAAA      GACGCCGGGCGAGG GCTT CCTCTCCCGGCGTC       TTGCTTTGCATCAGG 100 36
CTM43_RS07245 NONE
        arsC 1460397 .. 1460416 - -16.4  -5.47218   TCCTACGTAAAAAAA            GCGCCGCG CAAG CGCGGCGC             GGGTGAGTTAGCTTA 100 33
CTM43_RS07235 1459197 .. 1459211 -   -10  -4.23674   TCGGATGAAGACAAA               CTGCAG GCG CTGCAG               CTGCGCGCCAGACTG  82 199
CTM43_RS07205 NONE
CTM43_RS07200 1452055 .. 1452079 - -12.2  -5.95166   TTTAATTAAAAAAAA         GCCCCGCGATG TGTT CAT-GCGGGGC          TGGTTGTTCATTCGT 100 33
        ppk1 NONE
         ppx 1448267 .. 1448286 - -16.4  -4.77036   GCTGAGCAGCAAAAA            GCCGGGCG TAAG CGCCCGGC             TCGGTTGATAGCCAG 100 49
CTM43_RS07180 1445389 .. 1445401 -  -5.5  -3.85698   CCGTGCGCTTATAAA                TCGCC GAC GGCAA                AATTACCGCATCAAA  61 108
CTM43_RS07170 1443112 .. 1443140 -  -2.4  -3.84271   TTATAATATGAATAA       TGCCTGCCAT-AT GGCT ATAAGGGCAGGCG        TAAATTATCAAGGGC  52 55
CTM43_RS07165 NONE
CTM43_RS07160 1439780 .. 1439799 - -12.2  -4.23781   CTGAGTAAAACGAAA            CCCTCTGT GTTT ACAGAGGG             TTTTTTTATAGCTGC  95 72
CTM43_RS07145 1434964 .. 1434975 -  -5.8  -3.57144   GCGCCCAGTGCGAAA                GGGT ATTT ACCC                 TTGAGGCCCGCTGCC  55 140
CTM43_RS07075 1415731 .. 1415748 -  -5.5  -2.63382   CTCGACAGGTACAAG             CCCTGCG GCAG CACAGAG              TAACCGGTTTAGCGA  48 118
CTM43_RS07070 1414458 .. 1414471 -  -9.5  -3.44848   GTGCTCGATTAAAGA               GCGCG CCGA CGCGC                CGGCAAACTTATTGA  67 326
CTM43_RS07010 1404907 .. 1404922 -    -9  -5.75478   AATGACATAAAAAAA              GGAAGC CGCG GCTTCC               TTTTTGACATCAGTA 100 46
        csiE 1400592 .. 1400602 -  -2.4  -4.72272   CGCGTTGAGTAAAAA                 GGTG TTC CGCC                 GCTTCAGCGCCCGCG  70 372
CTM43_RS06960 1393682 .. 1393697 - -11.8   -4.8048   CGTTGACATCAAAAA              GGCCGC GTAT GCGGCC               TTTTTTGCGTCTGGA 100 43
CTM43_RS06950 1390800 .. 1390828 -  -8.2  -3.39288   TACCGGCGAAGAAGA       CGACGCGGCGA TTTAACGC TCGCCGC-TCG        CTGCAGTATTGCCGG  66 87
CTM43_RS06925 1386166 .. 1386199 -    -6  -3.70076   GCAAAGTGACCGAAA     CCTATCCGGCGAACC CGAAC GGTTCCCCGAAC-GG     TATCACCGCGGTGAC  61 328
        mltF 1380505 .. 1380517 - -10.5  -3.06492   CCAGGGATGCCAAGA                CCGGC GCC GCCGG                CTCGCTGATGGATGT  66 188
CTM43_RS06900 1378387 .. 1378405 -  -4.5  -3.79177   GAAACAACACAAACA             GGGCG GGCATTATA CGCCC             ATTTTCTGCTCAGAC  59 35
CTM43_RS06895 1377759 .. 1377782 -  -8.1  -2.75064   GCCCGCATCGAAGCA          GTGATCGCC CGCAGC GGCGATCGC           CTTGCCCGCCGGGTG  54 341
CTM43_RS06830 1366217 .. 1366238 -  -2.8  -4.08216   TCAGGCGCGGGAAAA           CGCCCTCG CGTCGC CGTGGGCT            TCGCGGATTGAGGTC  58 463
        srmB 1364467 .. 1364484 - -14.1  -4.16943   CGCCAGATGTGAAAA             CGCCGGG ATAT CCCGGCG              TTTTTTTTACTCATC 100 32
CTM43_RS06810 1363026 .. 1363041 - -10.4  -5.15969   CCTGAATGCAAAAAA              GCCAGC TGAT GCTGGC               TTTTTTTATGGCTGT 100 44
        trxC 1361261 .. 1361281 -   -14  -4.16943   TCGCAGAGGTGAAAA            CGGGGCAC AAGCG GTGCCCCG            GAAGGGTTATTGTTG 100 32
CTM43_RS06795 NONE
CTM43_RS06790 1357772 .. 1357798 - -12.4  -3.11812   ATGCAGACGACGTAA         GCGGGCAATAAT ACC ATTACTACCCGC         TAATGTGGTCAACAA  82 61
CTM43_RS06785 1356334 .. 1356351 -  -9.8  -5.24129   CGCTTCCAGAAAAAA             GCCCCG TCGAGG CGGGGC              TGATAGTCAGAGAAT 100 32
CTM43_RS06780 1355774 .. 1355790 -  -4.3  -3.57263   AGCGGCATCCTGAAA              GCAGAGA TGT TCCCGGC              TCAGGTTCGCGCGCT  51 228
CTM43_RS06770 1354249 .. 1354290 - -23.3  -3.76224   CTGCCAGGCATCAAA TAAAGCAAAAAGCCCGGTC GAAA GACCGGGCTTTTTGCTTTT  GCGTTTAAAAAGAAC 100 163
        bamD 1343361 .. 1343379 -   -16  -5.68039   AAACGTATAAAAAAA             CGGCAGCC AGT GGCTGCCG             TTTGCGATCGATGAG 100 47
        raiA 1342753 .. 1342768 - -11.8   -5.4505   TCTGTCAATAAAAAA              CGCGCC CGAA GGCGCG               TGGCATGACACAACT 100 52
CTM43_RS06720 1342573 .. 1342592 -   -15  -5.68438   TTATCAAATAAAAAA            GGCCTCCC GGGT GGGAGGCC             TTATTGTTCGTCTTC 100 49
CTM43_RS06715 1341385 .. 1341397 -  -6.2  -3.66178   TCCGCGAATGTTAAA                CCGG ATCCA CCGG                GACCACGTTTTCGCT  61 8
CTM43_RS06695 NONE
CTM43_RS06690 NONE
CTM43_RS06685 1335229 .. 1335246 -  -4.8  -2.90723   GGACGGTGAATGAGA             TCGACC GTCGCT GGCCGA              CGCAGGTGGACGCGG  46 462
CTM43_RS06645 NONE
CTM43_RS06640 1327331 .. 1327346 -  -3.9  -3.95787   CAGGATATCGAGAAA              GCGCA CAAATT CGCGC               TGGAAAAATTCGTCA  60 462
CTM43_RS06625 1326022 .. 1326041 -  -2.2  -3.84901   TGTATGAAAAACCAA            TACTGT GTTTTCGT ACAGTA             TAGACTGGTTTTTTA  52 66
        recN 1324252 .. 1324287 -  -3.8  -3.48378   ATGCCGATAATAATA    GACCTTCGCGCCGTTGG AAA CCTCCGGCT-GCAGGTC    AGCAGGCAATTTGCT  52 72
        bamE 1323812 .. 1323826 - -11.4  -5.64274   TCAGCCATAAAAAAA               GCGCTC ATC GAGCGC               TTTTTGCTTTTCCGG 100 44
        smpB 1322389 .. 1322420 -  -6.4  -3.06573   ATCAACAAGGATATA      GCGTAAGGGCCAGC GAGA GCTGGCCCTCGGGG       AGGGGAAATTAACGT  55 34
        ssrA 1321860 .. 1321885 - -14.7  -5.15381   AATAGACGTAAAAAA         GCCCGCAGAGC TTGT GCTGTGCGGGC          TTAGTAGACTTCATT 100 62
CTM43_RS06590 1320360 .. 1320375 -    -4    -4.946   ATCAAACACTAAAAA              CATATG GAAG CATACG               TATCAAAGTTTAGTT  74 178
CTM43_RS06585 1319126 .. 1319136 -  -3.2  -2.91383   ATTTTCATTTATAGA                 CTGA CTC CCAG                 TTTTGAAGCCATCCT  43 4
CTM43_RS06580 NONE
CTM43_RS06575 1316684 .. 1316705 -  -2.4  -3.24289   ATTCGAAACATGCAA           TACTCATT TGTATC AATGAATA            GTGATGCAGGCTTCA  43 172
CTM43_RS06555 NONE
CTM43_RS06550 1309100 .. 1309120 -  -3.3  -4.90079   ATTGGAATAAGAAAA            TAGACTAGT TAA ATCAGTCTA            TTAGATGAATACTTG  73 196
CTM43_RS06545 1308293 .. 1308315 -    -7  -4.21194   TGTGATTATTCAAAA           GCCCGTAA TAGGAAC CTACGGGC           TAACTCTTTGTTGCT  73 49
CTM43_RS06505 1299760 .. 1299779 -    -5   -4.2679   GAAGTTTTATTAAAA            TCCTAAGC CGTT GCCTAGAA             CGGCTTTTTTCCAGA  64 263
CTM43_RS06460 1288800 .. 1288815 -  -2.5  -3.34652   TCTTCAAAGAACATA              CCG-GG CAGCC CCTCGG              AGAATATATTCGGGC  46 247
        oqxA 1287127 .. 1287139 -  -3.4  -3.11445   AAAAAGCGGGAAAAG                TCCA TGTCT TGGA                TTCTCTGATTAGGGA  46 41
CTM43_RS06445 1283934 .. 1283956 - -13.5  -5.86061   GGTGACGAAAAAAAA           CCGCCTTCA AATTG TGAAGGCGG           TTTTTTTGTTATCTG 100 48
        speB NONE
CTM43_RS06425 NONE
CTM43_RS06420 NONE
CTM43_RS06415 NONE
CTM43_RS06410 NONE
CTM43_RS06405 NONE
CTM43_RS06400 1275067 .. 1275086 -  -3.5   -2.8805   AGCAGCGGCGATATA            GCCGG GGATCAGTAA CCGGC             GTGCTTATTGACCAG  43 14
CTM43_RS06395 NONE
CTM43_RS06390 1273378 .. 1273395 -  -2.5  -4.20354   AACGGAAGTGGAAAA             TTCGCGG TTAA CCGCGGC              GGCGCGCCACCGCCG  57 74
CTM43_RS06380 NONE
CTM43_RS06375 1270689 .. 1270713 - -12.2  -3.06515   GCCGATCCTGAAAAG         GGTGACCGGCG CCAG CGCCGGT-ACC          GCCGAGGCGATCAAT  81 42
CTM43_RS06345 1261344 .. 1261359 - -10.4  -4.18674   CGCAGAGAGAAATAA              CCGCCA TCTA TGGCGG               CGGAGGTTTTCCGAC  85 77
CTM43_RS06335 1259680 .. 1259694 -  -3.4  -3.86397   CTCTAAAATAAAAAG               GCCGCC AGC GCCAGC               ACAATTTCTCCACGA  55 42
CTM43_RS06330 NONE
CTM43_RS06325 1258283 .. 1258302 -   -10  -2.71712   GCTCTGTCCGCAAAC            TACCGCGC TGCT GCGCGATA             TCCCGTCGGTGAAAG  63 506
CTM43_RS06315 1257360 .. 1257374 -  -2.8  -4.52589   CTGGCGCAGAGAAAA               CCTG GACCGGA CAGG               GAAGAATGCCGAAGC  66 166
CTM43_RS06305 1256430 .. 1256451 -  -4.5  -2.75229   TAAAAGTGGCAACTA           GCTATAAAT TTTT ATTTATCGC            CTTTTTGTCGATAAA  47 5
CTM43_RS06295 1255827 .. 1255849 - -13.4  -3.01712   GGGCTGGCGGGAAGA           GGCGACTGGC AGA GCCAGTCGCT           GCTAACGCGTTGGTC  86 39
CTM43_RS06285 1254803 .. 1254828 - -16.9  -4.98255   GGGGAAGCAGAAAAA         CCCCTGCG-GCC AGA GGCGCGCAGGGG         CTGACGCGTATTTGT 100 115
CTM43_RS06275 1252854 .. 1252883 -  -8.5  -2.52464   GTTTTTGGCAAGCGA       GTCCCCCGCCG GGATAGAT CGGCGGAGGAG        GGGGGAGGCTGTGCG  60 44
        nrdH 1252464 .. 1252479 -  -2.6  -2.96274   GGCTGGAGAAGTAGA              CG-ATGA GGC TCATGCG              CTGGCCGCCGTAAAG  43 19
        nrdI NONE
        nrdE NONE
        nrdF 1248938 .. 1248970 - -12.2  -3.51411   ATTTTGTGAAATTAA     TCACCAGGAAT-CCG CCTG CGATATTCCTGGTGA      AAGTACGGTTAAAAG  86 34
        proV NONE
        proW NONE
        proX 1245170 .. 1245180 -  -8.2  -3.08813   CTCCACCTTAACAGA                 GCGC GAT GCGC                 CTTAACACTATGGAA  63 128
CTM43_RS06235 NONE
        ygaH NONE
        mprA 1243344 .. 1243365 - -15.9  -3.96148   CCTGTTTATCAGAAA           GGCCAGCAG AGAT CTGCTGGCC            TGGCTGTTTTCCTTG 100 72
        emrA 1242117 .. 1242132 -  -4.6  -2.72463   ACTCACCCCGAATTA              TCCGGC GTTG GCCTGA               ATGATCTCGTCTATC  46 7
        emrB 1240532 .. 1240547 - -10.4  -5.02074   TGACGCCGTAAAAAA              GGGACC CGGA GGTCCC               TTTATGTGAGGCTTA 100 38
        leuA 1238628 .. 1238639 -  -7.2  -3.20991   GCGAAGCTAATGGAA                GCGC TGGT GCGC                 CTGGCGCAGGGCCAC  56 133
CTM43_RS06145 1231756 .. 1231770 -  -4.2  -4.59773   CGTCAGCTGGAAAAA               GAGCTG CAG CAGCTG               AAAGAGCAGGCTGCG  70 478
        srlA NONE
        srlE NONE
CTM43_RS06085 NONE
CTM43_RS06080 1219931 .. 1219963 - -10.6  -3.01791   AGGGGGGCGGTAACA     GCCCAGGTCACGGCG CAAG CGCC-TAACCCGAGC      GACCCGCGGTGCCGT  72 122
        gutM NONE
CTM43_RS06070 NONE
        gutQ 1217668 .. 1217696 -    -3  -2.73364   GCTGGAGGCGAACCA       GGGCAACTGGGCGG CGA CCGCCC-GA-GCGC       TGGAACTGGACGTCG  41 74
CTM43_RS06055 1216098 .. 1216110 -  -3.4  -3.25942   ACTGGCTTATATCAA                GTTG CGTGC CAAC                TTTTTAATTCATTGA  46 34
CTM43_RS06050 NONE
        norW 1213422 .. 1213438 -  -6.5  -3.29273   GCTACCAGGACAATA              CCGTAGC CCG GCTAAGG              CGTTTACGCCGCAAG  59 53
CTM43_RS06020 NONE
CTM43_RS06015 1205223 .. 1205263 -    -9  -3.11072   TGGATGCAACAGATA GCCGACGTCCGTCCCCCG GTTATCG CGGGGAACGGGCG-CG-C GTGGGCGAAGGTGCT  67 40
CTM43_RS06010 1204455 .. 1204467 -  -3.3  -4.07885   CAGCGCGCCGGAAAA                CGACA TCG TGGCG                ATCCGCGAATTACGC  58 346
CTM43_RS05955 NONE
        hypB NONE
CTM43_RS05945 NONE
        hypD NONE
        hypE 1193004 .. 1193017 -  -5.2  -4.18934   TAGTATGTTAATAAA               GCGG TTATTG CCGC                TTTAACCCATCCATG  66 175
        flhA 1190804 .. 1190822 - -10.2  -3.55824   TACCAGCGATAAATA             GCGCGCTG CGC CAGCGCTC             CCTCTCACCGGCGCG  77 61
CTM43_RS05910 1185522 .. 1185548 -  -8.6  -2.51966   TCAAAGTGTACGAAC         GTCAGCTCGCGG AAA CCGAACGCTGAC         CCCCTCGCCGTCGGC  60 119
CTM43_RS05900 NONE
CTM43_RS05895 NONE
CTM43_RS05890 1182082 .. 1182108 - -15.1  -2.71144   GACCTCGGGGAATCA         GGCCCGGCCAG CGCGT CTGGCCGGGCA         AGGCGCTAGGCGTGA  95 31
CTM43_RS05885 NONE
CTM43_RS05880 1180140 .. 1180150 -  -6.8  -3.14978   GAAGATCAAGAGATA                 TCGG CGA CCGA                 CTGGCGCGGGATCAG  57 5
CTM43_RS05875 NONE
CTM43_RS05870 NONE
CTM43_RS05865 NONE
CTM43_RS05860 1176274 .. 1176313 -  -8.6  -4.30719   TTTGGCGAGAATAAA  CCGGCCTGCAAGCAGTG TCCGGTG CACTGCTACCA-GCCGG  CGAAGCGCGAGGAGA  81 235
CTM43_RS05845 NONE
CTM43_RS05840 1172253 .. 1172283 -  -8.9  -3.31799   CAGAAGGGGTGACAA       CCCCCTCCGGACG ACAAG CGCCCGGAGGATA       AACCGTTAGCGGGCT  69 31
CTM43_RS05830 1169334 .. 1169352 - -17.4  -2.50016   CTCGACGATGAATAT             CCCCGGCC GCG GGCCGGGG             GCAGGTGCGTTATTA 100 50
CTM43_RS05825 1168270 .. 1168282 -  -3.3  -2.81702   CAAGAGCAGTAACCA                GCGCA TCA TGCGG                GCTGCCCTTCACGGG  43 18
CTM43_RS05820 NONE
CTM43_RS05815 NONE
CTM43_RS05810 1165652 .. 1165689 - -15.5  -3.82097   GGGAAACCGACGAAA   GCGCGCGGCGCGATCCGG ATT CCAGTT-GCGCCGCGCGG   GGGTTACGGCGCCAG 100 29
CTM43_RS05805 1164662 .. 1164680 -  -8.8  -3.21726   TCTGAGAAGATCGAA             GCTTCGCT TGA AGCGACGC             GCAAAAAGTTCGCCC  64 57
CTM43_RS05800 NONE
CTM43_RS05795 1160586 .. 1160623 - -11.3  -3.39138   TAAAAATGATATTAA   TGCGAACCAACTTCTCA GTTA TGTGGAGTAGGTTCGCA    TATTGTTGTCGAGGT  78 97
CTM43_RS05790 1159440 .. 1159456 -  -2.9  -3.06696   TTCTTGCGTAACAGA              GCGCTTA GGA CAAGGGC              ATGCTTTAGTGTCTG  43 145
CTM43_RS05785 1158179 .. 1158193 -  -8.6  -3.79113   ACTGTTTTAGAATAA               GAACCT AGC AGGTTC               ACTTAATTGAATGGC  73 112
CTM43_RS05780 NONE
CTM43_RS05775 NONE
CTM43_RS05770 1155382 .. 1155395 -  -2.5  -3.04461   TATGTATCCTTAATA               TTTAA TGTA TTAAA                ATTATAAACGAATTA  42 27
CTM43_RS05765 1154245 .. 1154255 -  -5.4  -4.00934   ACTGGAAATATCAAA                 GAAG CTT CTTC                 CAGCTATCAGGGGGT  64 10
CTM43_RS05760 NONE
CTM43_RS05755 1152931 .. 1152968 -  -8.6  -3.01712   CCTTTGCCTTCAATA   CAGCTAAGGTGAAC TTACCGCTTT GCTCACCTTAACTG    GCAGTACTTACTCTT  63 48
CTM43_RS05750 1150878 .. 1150899 -  -5.9  -3.33434   AGCAAAAATATTTAA           CTGAAAACGC ATG GCGTCTTC-G           AAAAGAGGGTTTGAT  53 394
        mutS 1146958 .. 1146981 - -18.2  -4.25104   TTTTGTTTACTAAAA          CGGCAGCGCT TCAC AGCGCTGCCG           TTTTTCACCTTAATG 100 46
CTM43_RS05710 1143393 .. 1143433 -  -3.7  -4.65895   GCTGGTAGCCAAAAA  GGTGGCGCAGCGGGAGCTG GTG CCGCTCCTGCCGGAATACC  ATTTCCCACAGCAGG  70 135
CTM43_RS05700 NONE
CTM43_RS05695 1140928 .. 1140949 -  -7.1  -4.56597   GTTTTCTGTCAAAAA           GGCCCCCTC GAAA GTCGGGGCC            TTTTTCTTTGGGCTA  80 38
CTM43_RS05625 1128349 .. 1128374 - -12.6  -4.78149   GTGATAATTCAAAAA         GAACACGCGG GCGATA CCGCGCGTTC          TTTTGTGCGTATTAG 100 37
        queD 1123254 .. 1123276 - -11.3  -5.24129   TTGCCTGATAAAAAA          GCCCGG-CAG CGTA CTGACCGGGC           TTTTTATCGCTTACT 100 36
CTM43_RS05595 1120949 .. 1120968 - -13.6  -3.02371   CTTGTGAAATAATCA            TGCCAGCC TTCG GGCTGGCA             TTTTTTTTTACGCCT  86 48
        barA 1110076 .. 1110088 -  -9.1  -3.30124   TTGTAGTCCGGATAA                GGTGC GTA GCACC                GCGATCCGGGAACCA  69 135
        queF 1100600 .. 1100625 -  -9.7  -2.57132   CGGCGTTTCCACAAC         CTTGCGCGCGC CTAA ACGCACGCAAA          TTGTGAAATTGTTTA  66 41
CTM43_RS05510 1099113 .. 1099129 - -11.5  -3.16338   AGTCAGAGGAAGAGA              GCCCGCC GGG GGCAGGC              GTCAGGCGATGCCCC  79 58
CTM43_RS05505 1097322 .. 1097343 - -15.1  -2.71712   CGTGCTGTCGGAAAG           CGCGCCGCC GTAA AGCGGCGCG            GGGGGAGGCGTTGAA  95 45
CTM43_RS05500 NONE
CTM43_RS05495 NONE
CTM43_RS05480 1091903 .. 1091920 -  -3.3  -4.57837   AGACGTGGTTAAAAA             CCACCGA TGAC CCGCTGG              TAAAAGACGTATTAG  69 37
CTM43_RS05445 1083043 .. 1083055 -  -3.3  -2.83565   AATCAGGAAGATAAC                GCGCA AAT TTCGC                TAACTGACCGCCATC  43 25
CTM43_RS05440 1081802 .. 1081817 - -10.4  -3.28712   CGGCGCTTTTTACAA              CACGCC GCAC GGCGTG               GCGAATGCCATCCTG  68 411
CTM43_RS05425 NONE
        fucI 1076537 .. 1076564 -  -6.2  -2.72371   CTCCCGAAACAACAT        TGCCGGAT-GGCG CAG CGCTTATCCGGCC        TACAGACCGCGCGCG  51 85
CTM43_RS05415 NONE
CTM43_RS05410 NONE
CTM43_RS05405 1073797 .. 1073808 -  -4.4  -3.63991   CACGATCGTGAAGAA                GTGA CCGT TCAC                 GTGCGCCGCCTGTGG  56 122
        csdA NONE
        csdE 1068947 .. 1068963 - -13.7  -2.72263   AGATGCTGGCGAAAG              CGCAGCG TGA CGCTGCG              GCTGCCGGAAAGTAG  84 83
CTM43_RS05360 NONE
CTM43_RS05355 1066551 .. 1066564 -  -8.1  -6.02919   GCAGAAACAAAAAAA               CACCC TTGA GGGTG                TTTGTAATGTTGGTT 100 36
CTM43_RS05245 NONE
        pduB NONE
CTM43_RS05235 NONE
CTM43_RS05230 1044239 .. 1044249 -  -8.2  -3.53563   ATATCCTTTGTTAAA                 GCGC CAC GCGC                 AGTTCCTGCGGGTTT  69 10
        pduE 1043677 .. 1043690 -  -2.3   -2.9176   AATGCCAGCGATATA               GCGCA TGCT TGCCC                CCTGTTAATCGTCGC  40 30
CTM43_RS05220 NONE
CTM43_RS05215 NONE
CTM43_RS05210 NONE
CTM43_RS05205 NONE
        pduL NONE
        pduM NONE
CTM43_RS05190 NONE
CTM43_RS05185 NONE
CTM43_RS05180 1036920 .. 1036936 -  -3.5  -4.52589   CGTTTGCAGAGAAAA              GGTGTGC ATG GCGCCCC              CGGTTAGCGAATGGA  66 29
CTM43_RS05175 NONE
CTM43_RS05170 NONE
CTM43_RS05165 NONE
CTM43_RS05160 NONE
CTM43_RS05155 NONE
CTM43_RS05150 NONE
CTM43_RS05145 1030903 .. 1030918 -  -5.4  -4.07885   CAGCGCGGGTGAAAA              CGACCAG CTG CTGG-CG              GCGCTGGGCCGGGCG  64 53
CTM43_RS05130 1026987 .. 1027000 -  -3.8  -3.85698   CCGGCCGGGGATAAA               GCGA TAAGCG TCGC                GCTATCCCGGGCCGT  57 61
CTM43_RS05125 1026486 .. 1026496 -  -5.4  -4.56597   GGGCTGGCGGAAAAA                 TCAG TAA CTGA                 AGAACAGAGGGATAA  73 15
CTM43_RS05060 1007288 .. 1007302 -  -5.6  -2.83903   TTGGTTAAAAAGTGA               GCGCTA ATT TTGCGC               GTTGTGGATAGAGTT  49 163
        mutH NONE
CTM43_RS05050 1005754 .. 1005779 - -11.9   -2.6212   AAAGTCTGAAAAAGG         GTTGCAGCCTG TGAC CAGGCTGCAAT          TTTGTGGTTTACAGC  75 34
CTM43_RS05045 1005251 .. 1005267 -  -5.8  -2.61264   CTTTTTATTTATAAG              GTCAGG CATTC CCCGAC              AAAGGAGTATCAACA  51 204
CTM43_RS05040 1003932 .. 1003942 -  -3.2  -3.48593   CATTGCGGTACAGAA                 CCTC GGT GAGA                 ACGTGGCGATGCTGC  49 268
        galR  998780 ..  998807 -  -4.1  -2.78816   GCATCGTGCAGCATA        GCCAGACGGCGG AGGCG CTGCCGT-TGAC        CTTTATTGCCGTGGA  43 317
CTM43_RS04990  993653 ..  993665 -  -4.8  -3.50853   GTCGTCCAACTATAA                CAGC CGTCC GCTG                CTGCCGGAGGTGCTG  53 108
CTM43_RS04980  991295 ..  991321 -  -5.8  -2.63102   ATTATCTGCAGACGA        TCGCCGCCCTG GCGGAG CAGGG-GGCGG         AAGGGGTTATTTTCG  46 134
CTM43_RS04970  989988 ..  990000 -  -9.1  -3.09516   TGGTCTAGCAGGTAA                GGGCT GTC AGCCC                TTTTTTTATGCTGAA  66 310
CTM43_RS04965 NONE
CTM43_RS04960 NONE
CTM43_RS04955 NONE
CTM43_RS04950  985232 ..  985247 -  -3.9  -3.72695   ACGCGGCGGACGAAA              CCGAC TTCAGC GCCGG               GATCAACGCCCTTTG  54 383
CTM43_RS04930  979904 ..  979919 -  -6.1  -4.09864   ATCCAGCCGCTAAAA              TGCCG CGACTT CGGCA               TCACCTGCTCGACCA  66 255
CTM43_RS04915  975962 ..  975980 - -11.7  -5.66684   GAAGGGACAAAAAAA             GCCCTCC ATGAA GGAGGGC             AAGGCCAGTTACAGA 100 58
CTM43_RS04895  972208 ..  972228 - -10.4  -3.14132   CCGCGCCGGGATTAA           CCGCGCGCC GTCT GGCGCG-GG            CGGCGGTGACGAATA  73 1
CTM43_RS04890  970810 ..  970843 -   -14  -3.33583   AGAATATTGTCAGAA     TGTGCGACAGCAGCT CAGGC AGCCGCTGTCGC-CA     GAGGGGATTAGCCGA  93 33
CTM43_RS04885  969672 ..  969702 -  -9.1  -4.91109   TGGTCATGACAAAAA      CGACAACGGCCTCCA AGC TGGAGACCG--GTCG      AAGGATAAAAACTTA 100 177
CTM43_RS04880 NONE
CTM43_RS04875  968121 ..  968165 - -12.5  -2.73159   GGAATGGCGGGAAAT GTAAATCAACAGCGAATAA GTACGCT TTATCCGCTACTGATTTAC CGGGAGAACATTTAG  78 37
CTM43_RS04870  967296 ..  967311 - -11.8  -4.63184   AAGTGACGTTAAAAA              GCCGGG AATT CCCGGC               TTTTTTTACATGGCA 100 31
CTM43_RS04840  960725 ..  960739 -  -9.2  -5.54079   GCAAAAACGAAAAAA               GCCCCA TAA CGGGGC               TCGACATTGCTGCGT 100 115
CTM43_RS04830  958812 ..  958848 -  -2.2  -4.07568   CTGTGGCCGGCAAAA   CA-GGTGATTCGCCGTC TGAC GCCAGCGCATCAGCATG    ACGCCTCGTGCGGCT  56 426
CTM43_RS04820 NONE
CTM43_RS04815  956453 ..  956466 -  -8.1  -3.48276   CCGCTCGCGATACAA               CGCCA TCCA TGGCG                TCAAGGCTATTGGAT  66 32
CTM43_RS04810  954957 ..  954970 -  -2.3  -2.76509   GTCGAAATAACGAAC               CGGAT TGGC AGCCG                TTGTGCCTTCCAGGC  40 455
        fimA  954330 ..  954346 - -10.8  -2.55585   GTTGAAAATAGAGAG              CGGGCC CTCCT GGCCCG              AATAGCTTCCCTGCC  72 52
CTM43_RS04800 NONE
CTM43_RS04795 NONE
        fimD NONE
CTM43_RS04785 NONE
CTM43_RS04780 NONE
CTM43_RS04775 NONE
CTM43_RS04770  946801 ..  946813 -  -3.3  -5.05782   AGGTAGTGGAAAAAA                TGCGC CAG GAGCA                GCGGAAGATTATCCC  78 147
CTM43_RS04755 NONE
        mdtN  944858 ..  944872 -  -5.6  -2.58959   CGAGAGGAAACATAG               CGTCGC CCG GCTACG               GCTGCAGCACGGCGC  48 21
        mdtO NONE
CTM43_RS04740  941229 ..  941243 -  -2.1  -3.14279   AATATTTAAAAGAAC              TGGGCG TACC CGCC-A               CCCCGGCCGACGTCG  41 255
CTM43_RS04710 NONE
CTM43_RS04705  935379 ..  935401 -  -9.8  -2.72344   GCTGATCCTCAATGA           CCACGGCGAG CAG CTCACCGTCG           AGATGCCCGGACAGT  61 304
CTM43_RS04695 NONE
CTM43_RS04690 NONE
CTM43_RS04685  932630 ..  932645 -  -6.8  -3.50893   AATCAGACAGCACAA              GCGACA AGGC TGCCGC               GGCAATCACGTTTTT  61 77
CTM43_RS04675  931070 ..  931104 -  -2.9  -3.61715   CATCTCTGTTAATAA    TTAGCCAGACGCAC TTCAGTTG GTGCA-CTGGCAAA     AAGGTCCGTGTTGTT  51 99
CTM43_RS04670  929401 ..  929430 -  -2.9  -2.64155   TGTGGTTCAAACGCA       GAGCGCAGTTT GTTGGCCG AAACTATGCTC        TCTCTTTATCCACTA  41 96
CTM43_RS04665 NONE
CTM43_RS04660  927090 ..  927100 -  -3.2  -4.98436   GCAACAGGAGAAAAA                 GTCA GTT CGAC                 TTAACCAGTCGATCT  73 451
CTM43_RS04640 NONE
CTM43_RS04635  921271 ..  921292 - -15.9  -3.02263   ACAGGTGGGGGAATA           TCAGGCCCG TTGC CGGGCCTGA            TAGATGACAAGCATT 100 39
CTM43_RS04630 NONE
        hdeB  918813 ..  918850 - -11.5  -5.09895   CAGGCACGTAAAAAA   GCGAAAAACAG-CAATCT GTA AGATAGGCTGTTTTCCGC   TGGTGGTTTATCAGG 100 70
         amt NONE
CTM43_RS04615 NONE
CTM43_RS04610 NONE
CTM43_RS04605 NONE
        ureE NONE
CTM43_RS04595 NONE
        ureG NONE
CTM43_RS04585  911445 ..  911459 -  -8.5  -3.08679   TTGTCTGACGGAAGA               GGGCC GTTAA GGCCC               TTTTCCTGAAGGCAA  63 57
         yut NONE
CTM43_RS04575 NONE
CTM43_RS04570 NONE
CTM43_RS04565 NONE
CTM43_RS04560  906080 ..  906094 -  -5.6  -3.03085   AAACAGAAAACATTA               CACGCC CCC GGCCTG               GACAGGCATTTCCTC  51 8
CTM43_RS04555  905190 ..  905200 -  -3.2  -4.65895   TCTGGGATTGAAAAA                 GTCA CCC CGAC                 AATCGTTCAGGCTTG  69 309
CTM43_RS04530 NONE
CTM43_RS04525  897246 ..  897263 -  -7.7  -3.51934   TGTGTTTCACAAATA             GCCT-GCC TAC GGCCAGGC             AGAAGATAAATACCC  66 132
CTM43_RS04520  895781 ..  895791 -  -3.2  -4.11216   GTGCCAGGCGTAAAA                 GCAA TGT CTGC                 CCGCGTGGAGAGGTG  58 458
CTM43_RS04510  892462 ..  892478 -  -3.6  -2.51187   AAATATTCCAGGAAT              GCCCTG TGGAT CAGGGT              TTATCTTTCAATCCC  42 19
CTM43_RS04495  889324 ..  889334 -  -6.8  -3.06796   TGTTAGTCTATTGAA                 CTCC GGC GGAG                 GACTCCACTTTGGTT  55 102
CTM43_RS04460  881547 ..  881561 - -11.4  -3.91911   TTTAGGGGAATGAAA               GGGGCT TAA AGCCCC               TTTTCTATTTCTGGA  88 16
CTM43_RS04390  871193 ..  871219 - -11.7  -3.96486   AAGCAGTTAAAAAGA         CAATGAGAGGG GATTT CCCTCTCATTA         CATTTGTTAGATAGC  91 32
CTM43_RS04385  870872 ..  870930 - -18.2  -2.97475   TTTTCTACGATAAAT CATCCATACGCTGGGCCTGTGCGGATAA CGT TTATCCTCACAGGCACAGCGCCACGATG TCAAACTTTTACTCG 100 26
CTM43_RS04370  867758 ..  867771 -  -9.5  -5.27779   GCGAAGAGCAAAAAA               CCCGG CTTG CCGGG                TTTTTTTTATGTCTG 100 223
        fldB  861008 ..  861032 -  -2.7  -4.56597   CTGGTGCTGCAAAAA          CCGGCGCAG GAGTAAG CCGCGTCAG          GAAAAGTGTTCGGCC  65 22
        ygfZ  858618 ..  858643 -  -8.3  -3.54741   CATCAGCGGGCGAAA         CAGTGGCTGAA GAAA TTCGACCACTG          CGCCATCTATTTGCT  62 518
CTM43_RS04310  857057 ..  857067 -  -5.4  -3.87149   TCTAGCAAAGTGAAA                 GTGA ATG TCAC                 GATATAACAAATTCC  61 83
CTM43_RS04305  855543 ..  855566 -   -16  -2.87274   GCGGATAAGCAATTA          GCCCTCCCCC GGCC GGGAGAGGGC           GGTTAGTTACAGGTT 100 32
CTM43_RS04300  855067 ..  855080 -  -6.7  -3.41581   TAAGTGATGAATTAA               CCTGA ACTG TCAGG                AGAATCAATCACTCA  59 34
CTM43_RS04295 NONE
CTM43_RS04290 NONE
CTM43_RS04285  851431 ..  851452 -  -5.9  -3.55444   CCGTGAGGCGGTAAA           GCGCATGTCA CAT CGACATG-GC           GGTAAGGGCGGGGCG  55 497
        zapA NONE
        ssrS  840960 ..  840976 -  -5.1  -3.04468   TGCGAAGTAAAGAAG              GGAATCT CCG AGATGCC              GCCGCAGGCTGTAAC  51 9
CTM43_RS04230  840018 ..  840032 -  -4.2  -4.00348   CCGCAATCAACCAAA               TCTTCG CCG CGCAGA               GCATCAACATTGCCG  60 258
CTM43_RS04215  836923 ..  836941 - -13.2  -5.76237   GATAGAAACAAAAAA             GCCACTTC GCT GAAGTGGC             TTTTTTATGCCCGCA 100 43
CTM43_RS04175 NONE
CTM43_RS04170  826932 ..  826976 - -12.2  -3.68445   AAAAAGGGCGAATAA CCCCG-GTAACCCCCTGTGCC GTAC GGTACAGGGGGTTAATCAAGG CGCAGGCCGCTGGGC  88 16
CTM43_RS04145  821764 ..  821782 - -11.7  -5.27938   AGGCGTAAATAAAAA             GGCCAGC GCGAG GCTGGCC             TTGAAGAGAGGAAGC 100 48
CTM43_RS04140  819993 ..  820017 - -15.8  -3.40907   GGAGAGCAAGAGGAA          GCTTCCTCCC GGGAT GGGAGGAAGC          TCAGGAAGGTTAATC 100 35
CTM43_RS04135 NONE
CTM43_RS04130 NONE
CTM43_RS04125 NONE
CTM43_RS04120  816829 ..  816844 - -10.4  -4.07568   CTCGCTGCGCCAAAA              GCGGAC GTTG GTCCGC               CGTCGTGCTTATTTA  85 34
CTM43_RS04115 NONE
        ruvX  815656 ..  815688 - -16.9  -3.58037   CACTAAGCGGGTAAA      CGTGCGCCGTCAGCG GTC CGCCGGCGGCGCAGG      AGGGCAGAGTTTAAA 100 36
CTM43_RS04095 NONE
CTM43_RS04090 NONE
CTM43_RS04085 NONE
CTM43_RS04080 NONE
        hemW  810305 ..  810329 - -11.4   -3.4149   ATGTAAGGGGAAAGA          TACGGGCGAC GACGT GCCGCCCGCA          GGGATTACTCTTCGC  82 30
CTM43_RS04070  808963 ..  808984 - -15.1  -2.77947   CAATAATGGCGAAAT           CGCGCCCGC CGCG GCGGGCGCA            GGGGCAAAAGTTACT  95 36
CTM43_RS04065 NONE
CTM43_RS04060  806400 ..  806411 -  -2.2   -5.0538   CGCGAGTCGAAAAAA                GCCGC AAG GCG-C                TGGATAAAATCATTA  77 488
CTM43_RS04040  803820 ..  803835 -  -2.4  -2.84617   TAGCCGAAAAATTTA              TACCGG CGCT CCGGCT               TTTAGCTGTTGCAAC  40 7
CTM43_RS04035  803500 ..  803511 -  -7.2  -3.53012   GTTTGTTTTTTTAAA                GGCC GCAG GGCC                 CTTACTGTTTTTCCG  64 27
CTM43_RS04030  802339 ..  802366 - -13.5  -2.87325   ATGGCGGAGAATAAG        CGCGGCCTCAGC GCGGG GCTGAGGCCG-G        AGTCGGGAGGAGGGC  85 40
CTM43_RS04025  800898 ..  800920 - -10.4  -5.31456   TGAAGGGATAAAAAA           TGCCCCGCTG AAC CGGCGGGGCG           TTTTGCTTTTGACGA 100 41
CTM43_RS04010  797612 ..  797641 -  -2.2  -4.09243   CACATTGCGCTAAAA       GCACGC-GTTTTC AGGCA AAAAACAGCGTCC       AGGCCGCGGAAATCG  55 6
CTM43_RS04005  797412 ..  797428 - -10.8  -5.15526   ACAGAAAAGCAAAAA              CCCGCC TTTTG GGCGGG              TTCTTTAAATAGTGG 100 38
CTM43_RS03945 NONE
CTM43_RS03940  782195 ..  782229 -  -4.9  -3.09635   ACCTTCAGCAGGGAA    TGGCCGACGCGCTGAC AACG ACCCGCGCGTCGGA-A     TAATCACTCCGCCCG  50 29
CTM43_RS03930  780594 ..  780617 - -17.4  -3.05596   GACGGCCTGATGTAA          GCGCCGGCCC CGGC GGGCCGGCAC           AGGCTAGTAGCCGAC 100 29
CTM43_RS03920  779483 ..  779497 -  -2.7    -4.731   AATGGATGAAGAAAA               CGCTG GAAAA CGGCG               TGGTGTACGTCCCGG  70 330
CTM43_RS03905 NONE
CTM43_RS03900  774668 ..  774697 - -14.3  -3.84451   GGCTGGAAAGCTAAA       CAGGACGGCTTCG CAGG CGGAACCGTCCTG        TGGTGGGAACCCTTT 100 67
CTM43_RS03865  770008 ..  770034 - -12.3  -4.63218   CCGGGCGCAACAAAA         GCGGCCGCTTT GCTAA AAAGCGTCCGC         TATTGTTGCCACTGA 100 49
CTM43_RS03860  769228 ..  769254 -  -6.4   -3.6106   TGTAATACCGGGAAA         GGGCGGCCGG GCGGGCG CAGGCCCCCC         GGCAGATAAGCGTCA  61 38
CTM43_RS03850  766903 ..  766940 -  -7.8  -4.75404   AAACGGTAGTAAAAA   CACCTCTCCCCGGCGTT TGTTT AACGT-AAGGAGAGGTG   AATCAGGCGGGGAGC  85 43
        dkgA  765486 ..  765513 -  -7.1  -3.66378   TAGACCGCAGCGAAA        TTATCGATACG CTCTAC CGTCTCGATAA         CGGTCAGCTGCGGGC  63 497
        qseB NONE
        qseC  754724 ..  754742 -  -2.5  -4.42667   GTAAAATGAGCAAAA            TGTGCAAA GTCT TTTGC-CA             AATGAGCAATAATCT  61 43
CTM43_RS03795 NONE
CTM43_RS03790  753631 ..  753647 - -13.7   -4.2349   GCGCCAGACGTAAAA              GGGAGCC TCA GGCTCCC              TTTTTCATGGCATTA 100 55
        tolC  747488 ..  747510 - -17.8  -2.53263   CTTACGTTTAACGCA           TCGCCTGTCC GAC GGACAGGCGA           TGCGCATCACAGTAT 100 46
CTM43_RS03755 NONE
CTM43_RS03750  745487 ..  745523 - -17.2  -2.78384   TGGCGCCTGATGATA    GCGCGCTCCGGCGGCA TTTAC CGTCGCCGGAGCGCGG    CATTATTCGACGAAA 100 28
        zupT  743280 ..  743298 - -12.4  -3.52874   TGGTAGAGAACAACA             CCAGCGCC TAC GGCACTGG             CTTCACCGTGACCAT  77 460
CTM43_RS03730  742346 ..  742363 - -14.1  -4.37198   AAGCCAAACGCAAAA             CGGGCCC CCAG GGGCCCG              TTTTTTACTGCTGCT 100 30
CTM43_RS03705  735427 ..  735442 -    -4  -3.48772   AAGTCTGGCAGAGAA              GACGAA TTAG TTCATC               CACCGGTCTTTACGT  52 16
CTM43_RS03700  733723 ..  733738 -  -2.4  -3.66178   GTGCTGAAGCCGAAA              CAGCCG CGCG CGGTCG               GGATTGACGATATGA  51 417
        plsY  731801 ..  731829 -  -9.4  -4.07568   GGGCGCGGCGGAAAA        GGCGGCGGATCG GGTTG CGCCGCGCCGCC        AGCCGCCAGCGCAAC  78 186
CTM43_RS03675 NONE
CTM43_RS03670 NONE
CTM43_RS03665 NONE
        ureC NONE
        ureE NONE
CTM43_RS03650 NONE
        ureG  726597 ..  726638 - -18.7  -2.93326   TAAAGAGAGAGCAGA GGCTGCACCATCCGGACGC GCTT GCGCCCGGCTGGTGCAACA  GGCCTATTTGCCAAG 100 29
CTM43_RS03640  724849 ..  724871 - -19.2  -3.53761   TAACGCGTCCTGAAA           CAGGCCGACG TCA CGTCGGCCTG           CCTTCCTGACTACTC 100 35
CTM43_RS03630  723296 ..  723322 - -10.9  -4.40882   TATAAACGAAAATAA        GCCGCGCATTCC TTTC GGAA-GCACGGC         CTTACAACTACAACT  91 73
CTM43_RS03625 NONE
        rpoD  719403 ..  719418 - -10.4  -5.27923   GAACGCCATAAAAAA              GCTCCC CGCA GGGAGC               TTTTTAACAGGCTGT 100 60
CTM43_RS03610  718602 ..  718619 - -11.3   -5.5112   TTCAGGAACAAAAAA             GCCACTC TTTC GAGTGGC              TTAATTATATGATTT 100 54
        evgA NONE
CTM43_RS03590  712910 ..  712932 -  -7.7  -3.06501   GAGAGCGCTATCCAA           TCCGCCAAC GAAAA GCTGGCGAA           AGGCGATCAGAAAGG  57 330
CTM43_RS03580 NONE
        hdeB  711277 ..  711307 - -12.4  -3.79747   GTATCGATGAGTAAA       GCGGGACCCGCCGC AGC GCGGCGGGTTTCCC       CGGCCTGATGCCGGG  91 45
CTM43_RS03545 NONE
CTM43_RS03540 NONE
CTM43_RS03535 NONE
CTM43_RS03530  702701 ..  702720 -  -2.8  -3.35996   TAGCGTCATTGAGAA            TATCGCCA TCAG CAGCGACA             ACGGCCACATTCGCC  47 263
CTM43_RS03515  699382 ..  699396 -  -5.6   -2.6795   ACGAAAAAAAGAATG               CCCCGA CGA TCGGGT               TTCATTACGAAACAT  48 30
        dhaK NONE
CTM43_RS03500 NONE
        dhaM  696052 ..  696084 - -12.8  -3.17928   AGAGTAAGCGAAAAC     TCACC-CTCCGGAGG CAGG CCCCCGGAGCGGTAA      CGGTCAACGTGAATT  84 41
        dhaK  694238 ..  694269 - -15.2  -4.08767   GCCATCGTGGTAAAA      CCCGGATAGCGGCGC GTC GCGCCT-TATCCGGG      CTACCGGCGGTGCCG 100 131
CTM43_RS03480  692397 ..  692413 -  -2.1  -3.05522   TAACCTGTTCAAAAT              GTGCTCC TGG GGCGGAC              GTATCACACGATACT  42 263
CTM43_RS03475  690980 ..  691004 - -20.1  -4.21936   TGTATAACGTGAAAA          GACCCTCTCCC GAC GGGAGAGGGTC          GGGTGTGAATTATGT 100 35
        ebgR  689389 ..  689430 - -10.8  -2.68823   CCCGGCCTACAGAAT GGCGTTCCGGCCAGGACCGG TAGC CCGG-CCAGGC-GAAGCGCC GCCGGGATGTGGTTG  72 43
CTM43_RS03460 NONE
CTM43_RS03455  685655 ..  685678 - -14.6  -3.75153   GGGCTGGAACCGAAA          GGCCAACGGG CGTA CCCGTTGACC           TCCCTTGTCGCTTAA  95 48
CTM43_RS03450  684133 ..  684161 - -13.9  -5.64274   CGAGGGATAAAAAAA        TCCCGCCAGCC GATGAGG GGCTGACGGGA        CGACAGGAACGTTAT 100 37
CTM43_RS03445 NONE
CTM43_RS03440 NONE
CTM43_RS03435  678926 ..  678950 -  -2.8  -3.78934   GCTGGCGCATAAGAA         GACGCCGCACT ATTT AGC-CTGCGTC          GAAAAGCTGGAGGAG  52 144
        lsrR  672087 ..  672113 -  -6.4  -2.83112   AGGTAACTCATGACA         TGCGCCTCGC TGTTGTC GCGCGGCGCC         AGGCCGTCAGGAGGC  54 32
CTM43_RS03395  670465 ..  670475 -  -2.4  -3.56643   GGGAGAGGGGGGAAA                 GGCG GAG CGGC                 ACCGGTAGTTAGGGT  47 34
CTM43_RS03390  668008 ..  668040 -  -7.5  -2.72991   GCAGATGTTTAACGA      TGCCCGCCGCAGCCT GAA ATACGGCGGCGAGCT      GTACGTCGTCGGCAA  51 264
CTM43_RS03375 NONE
CTM43_RS03370  665074 ..  665087 -  -6.7  -2.51535   TCATGACAAAACCAG               TGCGT CACT ACGCA                GAACGATTTAACGAA  52 19
CTM43_RS03365  663773 ..  663798 - -14.7  -5.38839   TACATAAAAACAAAA         CGGCTGACGTC GGAA GACGGCAGCCG          CTGCGCTTTTATGCA 100 245
CTM43_RS03360  662697 ..  662725 -  -8.1   -2.6381   ATAATTGTGACATGA        GCAGGTATTCTCG TTA CGAGAACGTCTGC        TATAGCTGATTACCG  58 75
        sstT  661229 ..  661254 - -12.5  -3.16785   CAGTACAGGAAGAGA         GCCCCTCCGCC CGAT AGCGGAGGGGA          AAGGCGTTATCCGCG  82 32
CTM43_RS03335  655815 ..  655832 - -12.7   -4.7497   GGCAGGCATGAAAAA             GCCGCCT GAGA AGGCGGC              TTGATCGGCGATTAC 100 54
        exuR  654923 ..  654942 - -12.1  -2.88544   CCTCACTGTCAGACA            GGCGCGC AGGGGG GCGCGCC             GGAGGGATAAGGCCT  80 40
CTM43_RS03325 NONE
        mzrA  653530 ..  653562 - -17.1  -3.60475   AACAAATGCGGGAAA      CCACCAGACTGGGTT AAA AACGCAGTCTGGCGG      CAGCTTACCCGAGGC 100 30
CTM43_RS03315 NONE
CTM43_RS03310 NONE
CTM43_RS03305 NONE
CTM43_RS03300  651961 ..  652000 - -11.3  -2.83071   AAGGGACAGGGAAAT  GGCAGAGCGTGGGCGCC AGGGAA AGCGCCCACGCTCAGGG   CCGCTAGCGAACTGC  74 29
CTM43_RS03295  651219 ..  651238 - -13.6  -4.41353   CTACAGATAGCAAAA            GCGAGGAG TGGT CTCCTCGC             TTTTTTCATTCATTC 100 53
CTM43_RS03290  650171 ..  650194 - -12.4  -2.70932   CTGTTTTCTGAATTA          TTGGGCGCCA TCAC TGGCGCCCGA           CAGATCAACGGAAGC  78 30
CTM43_RS03285  649672 ..  649697 - -16.9   -3.1676   AGATAGTGATGAAGA         CGCTCCTCCCG CTAG CGGGAGGAGCA          GGAAGATTAGTAGGA 100 32
CTM43_RS03275  647696 ..  647723 - -13.4  -2.80344   CGCTGAGTGAATAAT        GCCATCGGCCCC TCGC GGGGCCGATATC         TTCTTCAGGCCATTA  85 262
CTM43_RS03265  646412 ..  646427 - -11.8  -4.13767   CTTTTTATGTCAAAA              CCCCGC TTCG GCGGGG               TTTTTGCTATCTGAA  90 110
        garD  639486 ..  639503 - -12.7  -3.81414   ATCCCTAACCAACAA             GCCCGGA TAGA TCCGGGC              TAAAAGTGGTTAAAT  93 55
CTM43_RS03215 NONE
CTM43_RS03210 NONE
        diaA NONE
        yraP NONE
CTM43_RS03185  632014 ..  632032 -    -3  -4.66163   ACGGCCAGCCAAAAA             CCGTGG CCCTGAT CCGCGG             CGTGCAGTTCAAAGG  69 195
CTM43_RS03175  631011 ..  631025 -  -3.5  -2.53263   TGCACCGGGAATCGA              CG-CGC TGCT GCGTCG               TACCTTCGGCCGCGA  39 457
CTM43_RS03160 NONE
CTM43_RS03155  628243 ..  628290 -  -4.3  -3.14468   CGTCATCAGATTGAA GGTCTTCTTCCAGCCTGGCGCATC CTG GACGCGCCAG-CCAGAA-AAG-CT GCATCTTTAATAATG  48 83
CTM43_RS03150  627158 ..  627187 -  -9.9  -2.68775   TTATCAGTAAAGCTA       TTGCCCGGTGG-CG CGA CGTCCACCGGGCTG       ACGTGTGTGTTACCC  66 35
CTM43_RS03120  620304 ..  620319 - -11.8  -4.84359   CGAGTTTCAGAAAAA              GGGGCC TGAC GGCCCC               TTTTTTCGACCGGGC 100 61
CTM43_RS03080  611757 ..  611776 - -16.4  -5.48213   CATTCAAAATAAAAA            GCCGGCGG TGAG CCGCCGGC             GGAAAGCAACATTGT 100 48
CTM43_RS03075  610685 ..  610697 -  -6.2  -6.02914   TTCAGATAAAAAAAA                GCCC GATAT GGGC                GTTCGGGCATAATTA 100 328
CTM43_RS03070  610074 ..  610099 - -15.5  -4.00124   CAGCTGAGAATGAAA         CAGGGACTGCC GACC GGCAATCCCTG          TGAAGAGTTAAAAGC 100 33
        yhbY  603407 ..  603421 - -12.8  -5.13137   TAAAGAAAGGAAAAA               GGCCGC ATA GCGGCC               TTTTATCAACGTCAG 100 116
CTM43_RS03020  601186 ..  601206 - -16.9  -4.72272   TCTCTGGATCAAAAA            GGGCCGCAT CTG ATGCGGCCC            TTTTGTTTTAATTGT 100 33
CTM43_RS02995  596910 ..  596940 -  -2.5  -2.71712   CTCCTGGTGTTAAAG      GTCCAGATCGTCCC ACAT GGG-CGATAGAGAC       ACTATACCCGCGTAC  39 173
        sfsB  596562 ..  596611 -   -13  -3.16742   GTGAAGGGCGAGTAA CCGCGTCCTGACAGCGCCCCGGGAC GTT GTTCCGGGGCGCTGTC-G-A-GCAA TCACATCACTTGTCG  84 31
CTM43_RS02950 NONE
CTM43_RS02945 NONE
        kdsD NONE
        kdsC NONE
        lptC NONE
        lptA NONE
CTM43_RS02920 NONE
CTM43_RS02915 NONE
CTM43_RS02910 NONE
        ptsN NONE
CTM43_RS02900 NONE
CTM43_RS02895  583409 ..  583431 -  -5.5  -3.87815   CGCTATTTTCATAAA          CCCGCCAGTC AGCT GAC-GCCGGG           GGAAGCGGCTCTGCT  61 243
CTM43_RS02870  577061 ..  577091 -  -8.3  -2.65442   ATATTATTTATATCA      GGCGCGGCGGATAC GCAG ATATCCGTCG-GCC       GTTATTCTATACGAT  61 47
CTM43_RS02865  575696 ..  575740 - -15.7  -3.35996   CAGGCTGAGTGAGAA GTACGAGCGTGATGTCCGGAA CAA TGCCGGACATCGCGCTCCTGC CATTTATGCCTGGCT 100 29
CTM43_RS02855 NONE
CTM43_RS02850  568148 ..  568171 -   -11  -5.52023   ATGAGCAATAAAAAA          GCCCGATGAC GTTA ACCATCGGGC           TTTTATGCGTGAGGC 100 52
CTM43_RS02830  565903 ..  565916 -  -9.5  -5.03145   CAATTTGCGAAAAAA               CCCGC TTCG GCGGG                TTTTTTTATGGATAA 100 85
CTM43_RS02810  563001 ..  563023 - -11.9  -2.71681   GAAGTGGGGGAAGGA           GCGGGCGCG ACGGG CGCGCCCGG           AGAATATTTTAATCG  75 50
        degQ NONE
        degS  560243 ..  560262 - -13.6  -3.41024   CGCCCTAACAGAAGA            GCCGGAAC CGCT GTTCCGGC             TTTTTATTGTCCAGC  91 124
        argR  558365 ..  558400 -  -4.6  -3.65475   GAGGCAAAAGAAAAG    GGAGTCGCCCTCTGAC GGTA GCCAGAGGGGAATTAC     TCAGAGTTCCTGCTC  57 26
CTM43_RS02785 NONE
CTM43_RS02780  557351 ..  557369 - -13.1  -5.39755   GACAAGCATAAAAAA             GCCCCCG GCAGG CGGGGGC             AAGTCGTCGAAATAA 100 53
        aaeR  552341 ..  552372 -  -2.9  -3.98661   TATATGCAGGATAAA      CTCAACGCG-CGCC TGATG GGCGTCGCACCGAC      CGGCAATGGCCGACG  58 467
        msrP NONE
CTM43_RS02700  538338 ..  538375 -  -9.4  -3.10796   TCTTATCAGGGAAGA   TTATCAACCGCTA-TCT GAAAA AGAGTCGCGGTTGATAA   AGGATCTGCGGGAAA  67 48
        aroQ NONE
CTM43_RS02690 NONE
        accC  535836 ..  535852 - -10.8  -5.98675   GAGAAAAAGAAAAAA              GGCCGG TTTAC CCGGCC              TTTTGCTGAGAGAGC 100 45
CTM43_RS02680 NONE
CTM43_RS02675 NONE
CTM43_RS02670 NONE
CTM43_RS02665 NONE
        dusB NONE
CTM43_RS02655  531486 ..  531511 -  -6.1  -5.60689   GCAGATAATAAAAAA         GGCGCTTCCCCA TGC CGAAG-AGCGCC         TTTTATATCAAGCAA 100 55
CTM43_RS02645 NONE
CTM43_RS02640  526127 ..  526143 - -10.8  -5.44119   TGCATGCGAAAAAAA              GCGCCC GCAAG GGGCGC              CTTCAAGACATAGCC 100 44
CTM43_RS02635  525250 ..  525283 - -24.1  -4.50627   CAGGCATCAAATAAA     GCAAAAGGCCCAGTC GAAA GACTGGGCCTTTTGC      TTTTGTGTTATCTGT 100 390
CTM43_RS02605  518874 ..  518899 -  -5.5  -3.21218   ACGCTGCAGCAGGAA         CTGAAT-GCATG AAT CAGGCGATTCAG         TTTCCTGACCGGGAA  51 241
CTM43_RS02570 NONE
CTM43_RS02565  513713 ..  513731 -  -7.3  -5.61881   GCGCAAAAATAAAAA             TGCCCGG CGAAC CCGGGCT             TCAGAAGAGACGACC 100 42
        rsmB NONE
        trkA  510986 ..  511002 - -10.8  -5.21236   AAGGGATAATAAAAA              GGCGCC TGTTC GGCGCC              CTGGGAATTACAGGA 100 33
        mscL  510063 ..  510092 -  -9.2  -2.96638   TTAAAGAGCTACAGA       CGATGCGCCGCT CTCTGC AGCGGCTCAACG        ATGCCTGTTGCGGCA  62 389
CTM43_RS02390  494394 ..  494414 -  -2.5  -4.63542   GAGAATGTTTAAAAA            TTGGGGC CTGATGC GCCTCAA            CGATATTGAGTACCA  66 364
CTM43_RS02330  486085 ..  486098 -  -9.5  -5.36965   GAAGACGACAAAAAA               GCGGG GAAA CCCGC                TTTTTTTACGCCTCA 100 38
CTM43_RS02305  480676 ..  480715 -   -10  -3.92602   TGAAGAGGGCAGAAA  CCCACCCTGCCAGCG-GCA GCG TACGCGCAGGCAGGATGAA  GAGGAAGAGTTTAGC  79 36
CTM43_RS02295  479505 ..  479517 -  -3.3  -3.02459   CAGGGAATAATCATA                CGGGA ACC TCCAG                CCAGCGGTTTAACCA  45 8
CTM43_RS02290 NONE
CTM43_RS02285  478094 ..  478106 -  -3.3  -4.58395   TCCATTCTGCAAAAA                GGTCG TCA CGACG                TGACCAATTGCGAAG  69 298
CTM43_RS02275  476946 ..  476971 - -15.5  -5.63236   AGGGAAAAACAAAAA         CGGCGTACTGC GGGA GCAATACGCCG          CTTAGCAACTTAACG 100 35
CTM43_RS02270  474406 ..  474434 -  -7.3  -3.58343   CTGACCAGCGCCAAA        GCGCTGGGCGG CGGCTTC CCGGTCAGCGC        CATGCTGACCACCCA  60 442
        tsgA  470022 ..  470049 - -15.6  -3.21099   TTCTTTTATGAGGAA        CAGCCCCCTTGC GGAT GCAAAGGGGCCG         AAGGCTTAGTGAGAC 100 31
CTM43_RS02230 NONE
        nirD  465485 ..  465500 -    -4   -3.8969   TGATCCACAGAATAA              CCTCAT AAAA ATAAGG               GGTAGAAAACGAGTG  57 156
        cobA  464050 ..  464070 - -16.9  -4.28656   ACGCAACAGCTAAAA            GGGCGGGAT GCT ATCCCGCCC            TTTTTTATGCCTGTC 100 59
CTM43_RS02150  451382 ..  451395 -  -9.5  -5.52023   AGCAGCAATAAAAAA               GCGCC CGCA GGCGC                TTTTTTTGTCAGAAC 100 34
CTM43_RS02140  448305 ..  448333 - -15.3  -3.08522   CAGCGAGCGGAAAAT        GGGCGACAGGGTA TCA CACCCTGTCGCCG        GGAAAATTAATCTTG 100 32
CTM43_RS02135 NONE
CTM43_RS02130 NONE
        hslO  446238 ..  446281 - -12.5  -4.67942   GCGAATAAATTAAAA GTCAGGCACAACGCGACAA ACAACA TTGCCGCCCTGTGCCTGAG AAAGATGCGGGGATT 100 39
        pckA  444277 ..  444292 - -11.8  -5.18726   GTTGCACAATAAAAA              GCCGGG CAAG CCCGGC               TTTTTCACCTTTGCG 100 45
        greB  441427 ..  441439 -  -6.9  -3.91506   TGACGGCTAAAAATA                CCAGC CGC GCCGG                GCGTCTCTCGGAAAG  66 48
CTM43_RS02100  439003 ..  439023 -  -9.7  -5.86061   GGTCATGAAAAAAAA            CTGCCCC AGAAAAA GGGGCAG            GGAGAGTTTAGCGTT 100 33
CTM43_RS02095 NONE
        feoB NONE
CTM43_RS02085  435723 ..  435738 - -11.8  -4.79352   CCAGTCATAAGAAAA              CGGGCC TGCT GGCCCG               TTTTTCATAGCTGTC 100 82
        gntX  433813 ..  433824 -  -3.6  -3.21593   TACTGGGTTATAATA                CGCC CATC AGCG                 GGGGTCTACAAGGTA  46 31
CTM43_RS02065  433153 ..  433167 -  -2.7   -4.2074   GCGGTAACACAGAAA               GGGCC AGGGA GGACC               GGCGGCAGGGTGCCG  59 54
CTM43_RS02060  431494 ..  431520 - -18.7  -5.24531   ATGTCCGATAAAAAA         GGCCGGCCCGC TTCAC GCGGACCGGCC         TTTTTCTGTGGCGGG 100 48
CTM43_RS02040  423603 ..  423630 - -11.2  -2.72144   GGAGCTGTGCTAAAC        GGCAACGGCGTC GTCA GACGCCGTATCC         CATCATCTTAAGTAA  72 11
CTM43_RS02020  419455 ..  419481 -  -3.7   -3.3353   GTTTTTACAAAGAGA         TGATTACTCTG GCTGA CAGAGAATTCA         GCCAACACCTGACTA  49 413
CTM43_RS01975  407544 ..  407556 -  -4.7  -2.74012   TGAGCAGCTGAATTA                CAGCG GCG CGCAG                ATGGCGGCATTGTCT  44 217
CTM43_RS01945 NONE
CTM43_RS01940  400692 ..  400715 -  -5.2  -4.21827   TGAAAGACGGCAAAA          CCTGGCTG GTGACCGG CAGCCCGG           GCGGCAGTCGGATCA  66 411
CTM43_RS01930  398729 ..  398760 - -14.4  -4.17556   TACACGGTCAATAAA      CCCCAGCGC-GCCGC CGA ACTGCTGCGCTGGGG      CGTAGACTGCATCTG 100 107
CTM43_RS01865 NONE
        panM NONE
CTM43_RS01840  380267 ..  380281 -  -8.6  -4.09739   TTAACCTGCGTAAAA               CCAAAC AGC GTTTGG               GTTGGTTCAACCAGG  75 494
CTM43_RS01815 NONE
CTM43_RS01810  375237 ..  375277 - -13.2  -3.36175   AATGTTGAGTTATAA GGGCACAGCGTTCGTGGCG TTTA CGCC-CGATCCCTGAGCCC  TTTTCAGGACTATTT  91 35
CTM43_RS01800  374114 ..  374133 - -12.2  -2.94416   TAGCCGTAGGATACA            CTCTGGAG TCGA CTCCAGAG             TCAAGGACTAAATTA  81 38
CTM43_RS01795 NONE
CTM43_RS01790  369922 ..  369933 -  -2.2  -4.08216   TGATGGTGCGTAAAA                CCGT GCGG ACGA                 TGCCGGTGGGCGAGA  56 349
CTM43_RS01780  368914 ..  368927 -  -2.3  -2.91276   TTCCTTTCGATAAAC               GGCCA CTAA TGGCT                CATCCGGCTATCTTA  40 63
CTM43_RS01775  368289 ..  368316 - -15.6  -5.40072   TGGCGGCTAAAAAAA        CGGCCCCCGGTT AGCG AACCGGAGGCCA         GCGCACCAGGCCAGT 100 43
CTM43_RS01765  365925 ..  365939 -  -2.7  -3.53012   TTCTGGCCGGTGAAA               CGCCG CTAGC CGGGG               AGCCGGCTTTTGGGA  49 16
CTM43_RS01720  356583 ..  356610 -  -3.5    -3.889   CTCAACGACAGGAAA        GTATGACGATT TTAGTG ATTCATCATAC         TTTGGGAGTAACCTG  55 112
        nikA NONE
        nikB NONE
        nikC NONE
CTM43_RS01695  352455 ..  352468 -  -2.3  -2.67803   CGCTGAGTAAATTCA               TGGTG TTTT CTCCA                GACCGTATAACGCCA  39 9
        nikE NONE
        nikR  350904 ..  350927 -  -5.2  -4.37711   TGATCAAACCTAAAA          CGCCAAACTC AATG GAGATTGCCG           GCCAGCCTGCCGTTA  69 373
CTM43_RS01675  349433 ..  349462 - -11.3  -2.55074   TGGAAGGGTAATCTA       CGCGTCCGGGCGC CCTG GTGCCCGGACGTA        TATGATCAGTTCAAC  72 31
CTM43_RS01665  346472 ..  346491 -   -15  -5.88565   TTCAGAATAAAAAAA            CGGGCCAG CAAG CTGGCCCG             TTTTGAACGAATAAC 100 43
        uspA  345256 ..  345273 - -14.1  -5.80951   AGCGAAAATAAAAAA             CGCCCGC ATCG GCGGGCG              TATTGCGCGGATAAA 100 50
        dtpB  343485 ..  343521 -  -6.6  -3.05463   ATCCGGGCTACCGAA   TTGTCGCCCGGCTCAGCG TAG CGC-AAGCCGGG-AACCA   CAATATCTGAACAAA  55 73
        rlmJ NONE
CTM43_RS01625  336665 ..  336681 - -12.3  -5.67063   CTGAGCATAAAAAAA              GAAGCCC CCG GGGCTTC              TTTTTATCATCCGGC 100 50
CTM43_RS01615  334517 ..  334538 -  -4.3  -3.06696   TTCTGGCTGAACATA           GCGATACGG ACCT CCGGATAGC            GTGAGTTCGGGGCCG  47 242
        treF  332845 ..  332865 -  -2.4  -2.99987   CATAGCAGGAGAAAG            CCGCCGGG AACAG CCCGACTA            GGTTGGCTCACCGTA  42 23
CTM43_RS01605  331769 ..  331801 -  -6.2  -3.06796   CGGGATCGGACTCAA     CGC-GCCCTTCGCCG AGAC CAGCGAAGCGCAGTG      TGACGAGCTGATGAA  52 487
CTM43_RS01595  330397 ..  330410 -  -2.3  -3.65714   AAAGTATACCTTAAA               TGCCG TATC CTGCA                GGAATGCCTCTCTCC  50 66
        yhjD  329153 ..  329170 -  -5.7  -3.44553   GCAAAAAGCGGATAA             TTTTTAC ACCA GTAAAAA              TAGTTCTATGAAATG  59 168
CTM43_RS01585  327688 ..  327712 - -21.5  -2.92398   AAAAAGTAGAGGAGA          GCCCTGACGCC GGG GGCGTCAGGGC          GAAGGATCACAACGA 100 32
CTM43_RS01575 NONE
CTM43_RS01570  324457 ..  324491 - -15.1  -3.20723   GGGGCAGTAACCTAA    CGCCTCTCCGACGCGCC AGC GGCG-GCCGGAGAG-CG    CTTTGTGCGGAGAAT 100 40
        bcsE NONE
        bcsF NONE
        bcsG  304939 ..  304958 - -12.1  -3.09516   CGTCTCACGATGTAA            GGCCGCC AACATA GGCGGCC             TTGTCGCTTATTGCG  81 33
CTM43_RS01435  285078 ..  285096 - -14.6  -4.25074   GACCAAATTCGAAAA             GCCTGCTC AAT GAGCAGGC             TTTTTTGCATCTGGG 100 141
CTM43_RS01405 NONE
CTM43_RS01400  277620 ..  277651 -    -8  -4.09739   CCAACCCGCTGAAAA      CGGCGAGCGG TAAAATAGAGAT CCACTCGCCG       ACCATCGCCGCTTTT  71 510
CTM43_RS01390  274963 ..  274997 - -14.3  -2.57294   AATAGCGATATCAAG     CATTTTGCCCGGCAG AGCGG CTGCCGGGCGACATG     AGGTTGCGCTTACTG  87 35
CTM43_RS01385  273865 ..  273876 -    -3  -2.53581   GAGATGTTTAATTTA                TGAT CGGC ATCA                 CGAAGGATCGTTAAC  40 36
CTM43_RS01380 NONE
CTM43_RS01375  272012 ..  272029 - -11.3  -3.04157   CAATGAGGAGACATA             CGTCCGT CGAA ACGGACG              CTGCTGTGCCGCGCT  74 83
CTM43_RS01370 NONE
        ghrB  269659 ..  269696 - -10.5  -4.69664   GACAGGATGCAAAAA   GAACCCGGG-GAGGGCGG TTG CCGCCGTTACCCGGGTTT   TTTTATGGCTTATTT 100 35
CTM43_RS01350  267064 ..  267082 - -17.4   -3.7046   GAAAAAAGCGGCAAA             GCCGGCGC GGG GCGCCGGC             TTATAGGGTTAGGCT 100 34
CTM43_RS01345 NONE
CTM43_RS01340  266047 ..  266066 - -11.4  -5.76633   CGACAGATAAAAAAA            TCCCCGCC ATCA GGCAGGGA             TTCTCGATTCTTAGC 100 50
CTM43_RS01325  262673 ..  262695 -    -7  -5.49234   ATAGGGAACAAAAAA           GAGCCCATGT ATT AAATGGACTC           TTTCTCTGATGCCTC  93 130
CTM43_RS01290  255970 ..  255980 -  -8.2  -4.65895   CCGCCGACGCAAAAA                 GCGC AGC GCGC                 TCGTATTACGCCGCA  83 146
CTM43_RS01280  254213 ..  254229 -  -9.3  -3.87569   CAAAAAACGGAATAA              GCGCCGC CCC GAGGCGC              GTAAAAGGTAAAAAG  76 513
CTM43_RS01250  249286 ..  249308 - -19.2  -4.25104   CCGGCGGGATGAAAA           TGACGCCCCG CAG CGGGGCGTCA           GCCATTACAGTTCAC 100 30
CTM43_RS01245 NONE
CTM43_RS01240  246460 ..  246473 -  -3.7  -2.69151   GTTGGGTATACACTA               CCGGC TAAT GCCCG                AGATATTTCAAGCGC  42 100
CTM43_RS01235  245074 ..  245088 -  -8.5  -2.87243   GTATCAGGACAATCA               GCGGC TCATC GCCGC               CCATCTGTAATCCGG  62 74
CTM43_RS01225  241805 ..  241818 -  -8.1  -3.51032   AGTGGCTAACCATAA               CGCCA GCGC TGGCG                TGGTGCAAATCGGCG  66 139
CTM43_RS01220  240439 ..  240459 -   -14  -4.57569   CTATGCGCGCAAAAA            CGCCAGCG GCTGG CGCTGGCG            TGAATGGGGTCGCTG 100 71
CTM43_RS27735  236657 ..  236681 -  -9.3  -3.72695   AGGCGCGGGAGCAAA          TCCGCCAGTAT CAG ACACTGCCGGA          CTGGAGCCATGACTG  74 205
CTM43_RS27710 NONE
CTM43_RS01180 NONE
CTM43_RS27700 NONE
CTM43_RS01175 NONE
CTM43_RS01170  230672 ..  230693 -  -2.9   -4.7497   GCTATTTATCAAAAA           TTCGCCG TTTGTCGC CGGCGGA            ATGCAATATCATTTA  68 405
CTM43_RS01160  230198 ..  230217 - -13.6  -2.64695   GTGAAGACAGAATAG            CCCTCTCC GTAC GGAGAGGG             TTGGGGATCAAAATT  84 33
CTM43_RS01155 NONE
        lldR NONE
CTM43_RS01145  226239 ..  226263 -   -10  -2.79302   ACGATGTTCAGCATA          CTGCCCCC TTAATTGCG GGGGGCAG          AATAGCAGATATTTG  68 92
        trmL NONE
CTM43_RS27660 NONE
CTM43_RS01135  224271 ..  224285 -  -5.6   -2.5547   ATGGTTCATATTAAG               CGGCTC TCA GAGCCT               GGGTTCGGTACTCTA  48 6
CTM43_RS01105 NONE
CTM43_RS27620 NONE
        envC NONE
CTM43_RS27610 NONE
CTM43_RS01095  216910 ..  216946 -  -9.4  -3.71284   CGCCCACGAAGATAA   CCAGGCGCCCGTCGCGC AAAA GCG-AACGGACCCCTGA    GTGGTCTAGTTGCCG  74 31
CTM43_RS27605 NONE
CTM43_RS27600  215843 ..  215853 -  -3.2   -3.5936   GCGAAATGTTCGAAA                 CCTG GTA CAAG                 ATGGCGGCGCTGATC  50 30
CTM43_RS27595 NONE
CTM43_RS27590  214486 ..  214524 -  -6.4  -3.53811   GGCACGCTGGGTAAA   GCGCTGGGCGGCGCCTCC GGC GGCTACACCGCCGCACGC   AAAGAGGTGGTCGAG  61 7
CTM43_RS27585  213866 ..  213878 -  -5.5  -2.63102   AGCAGGCGGACATTA                CCGTC GGC GACAG                CCACGTGATTAACTT  48 84
CTM43_RS01075 NONE
        rfaF NONE
        rfaC NONE
CTM43_RS27560 NONE
CTM43_RS01060 NONE
CTM43_RS27550 NONE
CTM43_RS01055 NONE
CTM43_RS27545 NONE
CTM43_RS01050  206816 ..  206846 - -11.1  -3.13504   CCTCGATGAAAATGA       CATCAGCCGCGAG GGCCA CTCGCCGCTGCTG       GAAGTGCCGATGAGC  69 374
        rfaQ NONE
CTM43_RS01035  203937 ..  203947 -  -3.2  -2.53263   CGCATCGTTAATTCA                 CCAG ATC CTGA                 TAAAGAGAAAGCAGC  42 7
CTM43_RS01030  202827 ..  202855 -  -3.7  -3.33815   ATCCTGGTTAACTAA        CGGCGTCAGGTGC GCT GCAGCTGACGGTA        CTGCTGACAAATGGA  49 2
CTM43_RS01025  201800 ..  201821 -  -2.9  -3.34398   TCTTTGGCGGAAACA           GCGGGTT TTTGGTCT ATCCCGC            GTGGCGATAACGCTT  47 17
CTM43_RS01020  200454 ..  200467 -  -3.1  -2.81547   GTTCGACATTAATGA               CT-CCG CTG CGGCAG               GTAAGGTTGCAGTAA  42 5
CTM43_RS01015 NONE
CTM43_RS01010  198966 ..  198976 -  -8.2  -2.66695   GTCGGGACCAAACAT                 GCCC AGC GGGC                 GACCTTTTATTGCCG  61 244
       coaBC NONE
CTM43_RS00980 NONE
CTM43_RS27490 NONE
        slmA  194183 ..  194204 - -14.5  -2.64416   GATTGCGAGGAGAAT           CATGCAGCC TGGC GGCTGCATG            TGCGGATTTACTGCA  90 33
CTM43_RS00970 NONE
CTM43_RS27480  191478 ..  191489 -  -2.2  -3.35327   ATGAAATTCGTATAA                TGCG CCCT CACA                 TTCGTTTCAAGCCGG  45 44
CTM43_RS27475  191152 ..  191174 -  -2.6  -4.46212   TGGCTTAGCACAAAA           CCAGCTGCAG GCG CTGCAAATGT           CCTCTTTTTACTTTA  64 129
CTM43_RS27470  190505 ..  190529 -  -4.3  -3.05463   ATCTTTGTGACGGAA          GCGCAAAATAC CGG GTATTTTTCGA          TGATTCCTGTCGATT  47 408
CTM43_RS27460 NONE
CTM43_RS27455  188904 ..  188920 -  -3.6  -3.81428   ATTAATCAACTCAAA              GCACGG CAACT CCCTGC              CCGGCAGGATGAGAT  57 405
CTM43_RS00935  186157 ..  186175 -    -3  -2.71745   TTCGTAATAATGAAT             GCAAGGAT TAT AGCCGTGC             GGGCGGTGACTTAAC  41 343
CTM43_RS27435 NONE
CTM43_RS00930  185210 ..  185229 - -12.2   -5.4433   AGAGATAAATAAAAA            GGCCATGA TTTA TCATGGCC             CTGGATACCGAAATA 100 61
CTM43_RS00925 NONE
CTM43_RS27420 NONE
CTM43_RS00920 NONE
CTM43_RS27415  182757 ..  182770 -  -3.7  -3.33815   ACGCGCGCGAAGTAA               CTGGC AGAT GCCGG                TGTTCTGTCTGCTGG  49 153
CTM43_RS27410 NONE
CTM43_RS27405  181877 ..  181890 -  -3.1  -3.19246   GTAATGCTAAGTGAA               GCGAT GGGT ATCAC                TATCGAAAACACTAT  45 13
CTM43_RS27400 NONE
CTM43_RS00910  180561 ..  180576 -  -8.2  -3.87815   GCCGAGCGCCATAAA              CCGACG CCGC CGCCGG               CGAAATTTAATGCGC  73 525
CTM43_RS27390 NONE
CTM43_RS27385 NONE
CTM43_RS00900  178500 ..  178515 -  -3.3  -2.78816   TGACTGGGCATGATA              CTGAA TGTGGG TTCAG               TCTGCCAATAGTTTG  43 22
CTM43_RS00895 NONE
CTM43_RS27375 NONE
CTM43_RS27370 NONE
CTM43_RS00890 NONE
        trmH NONE
        recG  173235 ..  173252 -  -6.3  -4.82901   CGTTGTGTAGAAAAA             TTGCCCGC AGC GCG-GCAA             AAGCGCGCGCTACGC  80 35
        glpX  172158 ..  172181 - -14.6  -2.71736   ATAAACGAAGAACAG          GGCAACCGCC TGCG GACGGTTGCC           TGGGAGAGAAAAAGC  90 45
CTM43_RS00870  171272 ..  171304 -  -4.8  -2.90194   AGTTCGGCAAGGAGA     CCCAGGACGTGCGCT GGAA AGCGGACG-CCTGAT      TACCAGTAGTGCTCC  47 25
CTM43_RS27340 NONE
CTM43_RS00860 NONE
CTM43_RS27335 NONE
CTM43_RS00855  169199 ..  169234 - -14.1  -4.19506   ACTGTAACGGCAAAA    GAAAGCCCGGCTT-GC GCTGT GCTAAGCCGGGCTCCC    ACGTTTTGTCAGTCA 100 74
CTM43_RS00830 NONE
        glpK  162568 ..  162597 -  -8.5  -5.24129   TTGGTTGATAAAAAA       CCCGGAGGCGGTGC TGC GCACCTG-TCCGGG       CTACAAGATCGTGCT 100 103
CTM43_RS27280 NONE
CTM43_RS00815 NONE
CTM43_RS27270 NONE
CTM43_RS00810 NONE
CTM43_RS27260 NONE
CTM43_RS00805 NONE
CTM43_RS00800  154425 ..  154440 -  -8.2  -3.78775   CCGGCGACTACCAAA              GCCCGC TGGC GCAGGC               CGCGGATACGGCGTT  66 214
CTM43_RS27235  152130 ..  152144 -  -7.1  -3.57144   GGCCCGACGCCGAAA               GCGGT GCTTA ACCGC               TATACGCAGTTCACC  64 191
CTM43_RS00780 NONE
CTM43_RS00770  148880 ..  148891 -  -4.4   -4.4078   TCGGGTGAATGAAAA                GATG GAGC CATC                 GTAGACCGCTGCCGG  67 92
CTM43_RS00765 NONE
CTM43_RS00760 NONE
CTM43_RS27210 NONE
CTM43_RS27205  146579 ..  146591 -  -6.3  -4.00756   CAGCGCAGTAAATAA                TAAGG TGG CCTTA                TCTTTATCGCCGCTA  68 67
CTM43_RS00750 NONE
CTM43_RS27200 NONE
CTM43_RS00735 NONE
CTM43_RS27195 NONE
CTM43_RS27190  141539 ..  141556 -  -2.6  -3.01712   TGGCGGTCGGGAATA             CCTTCG TCTTCC CGATGG              CCGGCTATTCGCGCA  43 12
CTM43_RS00715 NONE
CTM43_RS27185  138921 ..  138942 -  -7.2  -2.66316   GCCCGCAGCACATTA           CGCCGCGC TACAGC GCGCAGCA            GGTGGCGGAGTACAG  56 52
CTM43_RS27180  138498 ..  138533 -  -9.7  -3.53091   ACTCGCTGTGGCAAA   CGCCG-CGCAGTC-GCC GCCA GGCCGACCGCTTCGGCG    ACAGCGAAGCGGGGA  74 223
CTM43_RS00700  137379 ..  137402 -  -5.8  -2.90615   ATGGCTGTTAAAGGA          GGCGCCGCTG AAGA CCGCGACGCA           TTAAGCGGCCCCGGC  52 26
CTM43_RS00690 NONE
CTM43_RS27165  135169 ..  135183 -  -2.8   -4.4648   ATCCGGACTACAAAA               GCGT CAAAACC ACGC               CTTAACCTCCAACGC  62 13
CTM43_RS27160 NONE
CTM43_RS00675 NONE
CTM43_RS27155 NONE
CTM43_RS27150 NONE
CTM43_RS00670 NONE
CTM43_RS27145 NONE
CTM43_RS27140 NONE
CTM43_RS00665 NONE
CTM43_RS00660 NONE
CTM43_RS27130 NONE
CTM43_RS00655 NONE
        lspA NONE
        murQ NONE
CTM43_RS27120 NONE
CTM43_RS00645 NONE
CTM43_RS00640 NONE
CTM43_RS00635 NONE
CTM43_RS27115  122786 ..  122811 -  -2.5  -2.72471   CGCTTACCACAGAAT         GCC-TGTTCGCG GCT CGTGAATACGGC         GTTGAGGAGGAGGTG  39 50
CTM43_RS27110 NONE
CTM43_RS27105 NONE
CTM43_RS27100 NONE
CTM43_RS27095  121331 ..  121348 -  -4.7  -3.78775   CCGCTGACCAGCAAA             GTGGCGA TTAT CCGCCGC              TCCGCACGACCTGAC  57 8
CTM43_RS27090  120356 ..  120369 -  -5.2  -2.51888   GGCCAAACGCAATAT               CGGC ATCACG GCCG                CGCGCGATATCGTTC  45 517
CTM43_RS00610  118303 ..  118336 -  -2.3  -3.72695   AGGCGTTTCAGCAAA     CGCGCAACC-AGCAGG TAA CCTATTCGGTGGCGGG     TAAACGTTAAACGGC  51 32
CTM43_RS00590 NONE
CTM43_RS27055 NONE
CTM43_RS00585  112613 ..  112627 -  -2.8  -3.10343   AGAGGGATTAGCTAA               CGGT TTCTGCT ACCG               GAACGCTATTTTTGG  45 3
CTM43_RS00580  112101 ..  112141 -  -4.1  -3.88946   TATTTCAGATAATAA  CCATCCCATTCTGGCTA GAATAAA TAGCCAAAATAAGCTGA  TTTGTTTTTTAGGGT  57 89
CTM43_RS00575  110545 ..  110574 -  -7.8  -3.30124   CGCCATCCGGCACAA       CCGCGGGTACGGT GCCTG ACCGC-CCGGCGG       CGCTGCGCTTGCGCG  64 132
CTM43_RS27025  107900 ..  107910 -  -8.2  -3.08032   GCGGGCGCAAAAGCA                 GCCC AGG GGGC                 TTATCGCCGAGCGGG  63 409
CTM43_RS27015  105630 ..  105643 -  -4.5  -4.02719   TGAGTAAACATGAAA               TCACC CTCT GGCGA                GATGCCGCAATACCT  62 14
CTM43_RS00530 NONE
CTM43_RS27010 NONE
CTM43_RS27005 NONE
CTM43_RS00525  103214 ..  103255 - -14.3  -3.04517   AGCGTTCGGTAAAAG CGGCGCTGGCGATC-GCGCC GCT GGTGCTGACCGCCTGCGCGG TGGCGCTGGTGCTGT  90 330
CTM43_RS00515 NONE
CTM43_RS00510 NONE
CTM43_RS26990  101211 ..  101226 -  -3.2  -4.65895   CGCCTGATGCAAAAA              GCGC GTTTAGCG GCGC               CGATTACCGACGCGC  69 197
CTM43_RS26965 NONE
CTM43_RS26960 NONE
CTM43_RS26955   93706 ..   93724 -  -3.1  -3.88438   CCACATCAAACACAA             TGCGC TTTACCGGC GCGCA             GCTGGTTGTTCATTT  55 496
        tisB   92652 ..   92681 -  -4.1  -2.56596   TCCTCCATCAAGTCA       TCCCG-GGACGCCC GGC GGGCGCCTGCAGGG       GGGCGGTTTCCCGCC  44 67
CTM43_RS00460   92104 ..   92122 -  -3.8  -3.53184   CAGCAAAATGCAGAA             TACGGTGA GGG TCATCGCA             GACAGGTTCAACAGT  52 89
CTM43_RS00455   91260 ..   91277 -  -7.7  -3.47029   TTATGTAAACAGGAA             CGGCAAC TAAT GTTGCCA              TCTCAGGCTACGCCA  66 33
CTM43_RS26930 NONE
CTM43_RS26925 NONE
CTM43_RS26920 NONE
CTM43_RS00450   89835 ..   89863 -  -6.6  -4.09685   CGCCACCCGGCAAAA       TGACGGCACTGCG CATG CGCGG-GCCGGCA        GACGACCAGTCCGGT  68 87
        dsdX NONE
        dsdA   85934 ..   85949 -  -2.5  -2.60496   TGCTGCGCTAAAGAT              TAGCG CCCCTT CGCCA               GGTACTGCGCCATTT  39 9
CTM43_RS26880 NONE
CTM43_RS26875 NONE
CTM43_RS26870 NONE
CTM43_RS00405 NONE
CTM43_RS26865 NONE
CTM43_RS26860   77447 ..   77469 -  -6.3  -3.67597   GGCCTGATGTAACAA          CCTGCTCGCC GTCA GG-GAGCAGA           TGCGAATTTACAGAA  63 511
CTM43_RS26855 NONE
CTM43_RS26850 NONE
CTM43_RS00380 NONE
CTM43_RS26845   75899 ..   75913 - -12.8  -2.70774   TACCGCAACCACAAT               GCCGGC GCC GCCGGC               GGGCGTCAGCCAGCG  81 72
CTM43_RS26840   75551 ..   75573 -  -3.2  -3.35996   CAGTTTTACCTACAA           CGATCACGTG CTG CACGAGCGCG           ATCCGGCGCTGGATC  48 53
CTM43_RS26835 NONE
CTM43_RS26830 NONE
CTM43_RS26825 NONE
CTM43_RS26820   73495 ..   73507 -  -6.2   -2.7067   AGTTAAGTAAAAACG                CGCC GGACT GGCG                AAATCCGTTGTGGCG  51 99
CTM43_RS26780 NONE
CTM43_RS26775   68244 ..   68254 -  -3.2  -3.22909   GGAAAGCAGCAAAAC                 CGAG ACG CTCA                 AGCTGGATGCCTGGC  46 335
CTM43_RS26765   67726 ..   67743 -  -4.9  -2.79175   AATCCGCATTTAAAT             CCCT-CAA TCC TTGCAGGG             GATTCTATAAGCTAC  47 8
CTM43_RS26760   66687 ..   66711 - -13.5  -3.39482   CAACAGGATGTATAA          GCCCGGTCGCA TCG CGCGATCGGGC          TTTTCTTTTGCCGCT  91 151
CTM43_RS26745   63230 ..   63241 -  -5.8  -4.11394   ACGGCAGCGGCAAAA                CCAG CGTG CTGG                 AAGCTATCTACACGC  66 177
CTM43_RS26725   60845 ..   60876 -  -5.7  -3.30781   CGAAGGTAAATCTAA      CCAGCTGGCCCGC GCGGCG GCGCGTCAGGTGG       CGGATAACCCGGGCG  57 152
        rpmH NONE
CTM43_RS26715 NONE
CTM43_RS00305 NONE
        yidD NONE
CTM43_RS26705 NONE
        yidC NONE
        mnmE NONE
CTM43_RS00285 NONE
CTM43_RS26700 NONE
CTM43_RS00280 NONE
        yidZ NONE
CTM43_RS26690 NONE
CTM43_RS00270 NONE
CTM43_RS00265   51575 ..   51594 -   -15  -4.77438   ACGCATGATGAAAAA            GCCCGGCA TCGC TGCCGGGC             TTTTTTTATGCTTTA 100 31
CTM43_RS26670   50233 ..   50252 -  -7.8  -4.46854   TGAGTCAACAACAAA            CCAGCCAG TCTT CTGGCCAG             GGTCTGCTGGAGCGC  78 328
CTM43_RS00255 NONE
CTM43_RS00250   49276 ..   49286 -  -2.4  -3.87075   ATTATTGCCGATAAA                 GCGG CGG CGGC                 GGAATTGCAGCAATA  53 121
CTM43_RS28025   46708 ..   46728 -  -3.2  -3.54741   TATTATCCGTGGAAA            GATACCTG GATGG CTGGTACC            TCGTTAACGCAGAAA  50 7
CTM43_RS28020   45866 ..   45884 -  -3.8  -5.34309   ACCAGGAAAGAAAAA             GAGACC AGATTTG GGCCTC             ATGGTCTCCTCCTGC  87 481
CTM43_RS26630   42934 ..   42960 - -11.5  -2.94144   TGTTCACCGAAATGA        CGCCG-CCGCCG AATA CGGCGGGCGGTG         GACTGGCTAACGCCC  78 34
CTM43_RS27995 NONE
CTM43_RS27990 NONE
CTM43_RS26625 NONE
CTM43_RS27985 NONE
CTM43_RS26620 NONE
CTM43_RS26615 NONE
CTM43_RS26610 NONE
CTM43_RS26605   37780 ..   37796 -  -4.3  -4.72272   CTGCGTGATCAAAAA              CAGCACC ATC GGCGATG              ACTGCGAAATTAGCC  75 7
CTM43_RS26600   36830 ..   36842 -  -4.9  -4.02468   AAAAATATGTAGAAA                TTTCA ACG TGAAA                GGCTTTTACTTTTCG  62 500
CTM43_RS00190 NONE
CTM43_RS26595   36178 ..   36190 -  -5.5  -3.68658   AGTTGACCAAAAAAG                CGATG TAA CACCG                GCTTGAACGTAAAAA  59 34
CTM43_RS26590 NONE
CTM43_RS26585 NONE
CTM43_RS26580 NONE
CTM43_RS26575   32023 ..   32047 -  -5.6  -2.52464   GCCTTGCCGAATGTA          TGCAGGGCGA GATGA TCTCCCTGCC          GGGTAACCGTTACGC  48 6
CTM43_RS26570 NONE
CTM43_RS27930   29511 ..   29522 -  -7.2  -4.34345   CATACACCAGCAAAA                GGCC GTGT GGCC                 TGGACCTTCGCCTTC  76 3
CTM43_RS27915   27924 ..   27937 -  -3.8  -4.56597   GGTTTGGCTGAAAAA               GCAG GGGATG CTGC                GCCGCAGCGCCTGAT  70 128
CTM43_RS27905   25932 ..   25949 -  -4.9  -3.46859   GATCACAATAGAACA             GATCTCT ATAT AAAGATC              TTCTTTTTAATACTC  55 380
CTM43_RS27895 NONE
CTM43_RS27890 NONE
CTM43_RS00120 NONE
CTM43_RS27885 NONE
CTM43_RS27880   21917 ..   21938 -  -9.4  -3.27951   CAGCGCAGGAGAATA           TGCCGGCG GAAATT CGCCAGCA            GCTGGAAGCGCTGGA  69 198
CTM43_RS00105   18474 ..   18493 -  -9.3  -5.38958   AGTGAGAAACAAAAA            GCCCTTC GCAATG GAAGGGC             TTTTTTGACATCAGA 100 36
CTM43_RS00100 NONE
CTM43_RS26485 NONE
CTM43_RS26480 NONE
        rbsA NONE
CTM43_RS26475 NONE
CTM43_RS00090 NONE
        rbsB   14410 ..   14436 - -15.8  -3.53012   TCTGTTCCCGGGAAA         GCGCGCCACCGG GAT CCGGTGGCGCAT         GCCCTGCTTTTCTTT 100 83
CTM43_RS00080 NONE
CTM43_RS26465 NONE
        rbsR   12232 ..   12257 -  -9.7  -2.65298   CTGACCGATGATAAT         GCCAGCA-GCGG CAA CAGCCTGCTGGC         CGTCACCCAGCAGCT  66 233
CTM43_RS26440 NONE
CTM43_RS00060 NONE
CTM43_RS00055    8109 ..    8144 -  -4.8  -4.00532   TTTTTAAAGAGCAAA    TATCTCAAACGCCACC CGAA GATGAGTTTTGAGATA     CATCGGCACGCGTCT  62 61
CTM43_RS00050    5072 ..    5092 -  -3.9  -2.79518   TGAAAATTCTCAAAT            CCGCCAAAA CAT CTTCGGCGT            TGTAAGGTTAAGCCT  45 17
         rrf    4756 ..    4775 - -13.6  -4.85433   ACAGAAACGCAAAAA            GCCCATCC GGCA GGATGGGC             TCTTCACTTATTTGA 100 42
CTM43_RS00030 NONE
CTM43_RS26400 NONE
CTM43_RS00025 NONE
CTM43_RS27750 NONE
        dsbA    1431 ..    1449 -   -16  -3.69992   AAACAGATAAAGTAA             CGCCGGTC AGT GACCGGCG             TTTTTTTATTTCTTC 100 31
