CI103_RS00005	SM00382	ATPases associated with a variety of cellular activities
CI103_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CI103_RS00010	SM00480	DNA polymerase III beta subunit
CI103_RS00020	SM00387	Histidine kinase-like ATPases
CI103_RS00020	SM00433	TopoisomeraseII
CI103_RS00040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS00040	SM00895	CI103_RS00040
CI103_RS00055	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CI103_RS00095	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS00095	SM00866	CI103_RS00095
CI103_RS00175	SM00421	helix_turn_helix, Lux Regulon
CI103_RS00175	SM00448	cheY-homologous receiver domain
CI103_RS00180	SM00387	Histidine kinase-like ATPases
CI103_RS00200	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS00230	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS00230	SM00866	CI103_RS00230
CI103_RS00240	SM00382	ATPases associated with a variety of cellular activities
CI103_RS00275	SM00354	helix_turn _helix lactose operon repressor
CI103_RS00400	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS00420	SM00849	Metallo-beta-lactamase superfamily
CI103_RS00425	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS00430	SM00829	Enoylreductase
CI103_RS00445	SM00829	Enoylreductase
CI103_RS00560	SM00487	DEAD-like helicases superfamily
CI103_RS00560	SM00490	helicase superfamily c-terminal domain
CI103_RS00570	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CI103_RS00570	SM00954	Region found in RelA / SpoT proteins
CI103_RS00575	SM01409	CI103_RS00575
CI103_RS00580	SM00072	Guanylate kinase homologues.
CI103_RS00585	SM00532	Ligase N family
CI103_RS00600	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS00630	SM00382	ATPases associated with a variety of cellular activities
CI103_RS00680	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CI103_RS00680	SM01232	CI103_RS00680
CI103_RS00760	SM00829	Enoylreductase
CI103_RS00785	SM00450	Rhodanese Homology Domain
CI103_RS00805	SM00971	Serine acetyltransferase, N-terminal
CI103_RS00820	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS00820	SM00895	CI103_RS00820
CI103_RS00895	SM00642	Alpha-amylase domain
CI103_RS00905	SM00047	Lysozyme subfamily 2
CI103_RS00910	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS00920	SM00382	ATPases associated with a variety of cellular activities
CI103_RS00990	SM00382	ATPases associated with a variety of cellular activities
CI103_RS00995	SM00357	Cold shock protein domain
CI103_RS01000	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS01035	SM00354	helix_turn _helix lactose operon repressor
CI103_RS01075	SM00248	ankyrin repeats
CI103_RS01115	SM00382	ATPases associated with a variety of cellular activities
CI103_RS01120	SM00382	ATPases associated with a variety of cellular activities
CI103_RS01150	SM00028	Tetratricopeptide repeats
CI103_RS01205	SM00028	Tetratricopeptide repeats
CI103_RS01210	SM00052	Putative diguanylate phosphodiesterase
CI103_RS01210	SM00267	diguanylate cyclase
CI103_RS01210	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CI103_RS01255	SM00822	CI103_RS01255
CI103_RS01290	SM00014	Acid phosphatase homologues
CI103_RS01340	SM00382	ATPases associated with a variety of cellular activities
CI103_RS01345	SM00382	ATPases associated with a variety of cellular activities
CI103_RS01460	SM00382	ATPases associated with a variety of cellular activities
CI103_RS01460	SM00962	SRP54-type protein, GTPase domain
CI103_RS01460	SM00963	SRP54-type protein, helical bundle domain
CI103_RS01465	SM00382	ATPases associated with a variety of cellular activities
CI103_RS01480	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS01520	SM00382	ATPases associated with a variety of cellular activities
CI103_RS01525	SM00382	ATPases associated with a variety of cellular activities
CI103_RS01555	SM00382	ATPases associated with a variety of cellular activities
CI103_RS01600	SM00354	helix_turn _helix lactose operon repressor
CI103_RS01620	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CI103_RS01625	SM00642	Alpha-amylase domain
CI103_RS01630	SM00642	Alpha-amylase domain
CI103_RS01655	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS01665	SM00450	Rhodanese Homology Domain
CI103_RS01675	SM00420	helix_turn_helix, Deoxyribose operon repressor
CI103_RS01675	SM01134	CI103_RS01675
CI103_RS01680	SM00421	helix_turn_helix, Lux Regulon
CI103_RS01735	SM00899	CI103_RS01735
CI103_RS01740	SM00316	Ribosomal protein S1-like RNA-binding domain
CI103_RS01740	SM00732	Likely ribonuclease with RNase H fold.
CI103_RS01750	SM00448	cheY-homologous receiver domain
CI103_RS01750	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS01755	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CI103_RS01755	SM00387	Histidine kinase-like ATPases
CI103_RS01755	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS01770	SM00363	S4 RNA-binding domain
CI103_RS01915	SM00100	Cyclic nucleotide-monophosphate binding domain
CI103_RS01915	SM00419	helix_turn_helix, cAMP Regulatory protein
CI103_RS01950	SM00382	ATPases associated with a variety of cellular activities
CI103_RS02015	SM00838	Elongation factor G C-terminus
CI103_RS02015	SM00889	Elongation factor G, domain IV
CI103_RS02040	SM01403	CI103_RS02040
CI103_RS02060	SM01382	CI103_RS02060
CI103_RS02060	SM01383	CI103_RS02060
CI103_RS02075	SM00322	K homology RNA-binding domain
CI103_RS02095	SM01374	CI103_RS02095
CI103_RS02100	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CI103_RS02165	SM00363	S4 RNA-binding domain
CI103_RS02165	SM01390	CI103_RS02165
CI103_RS02170	SM00662	RNA polymerases D
CI103_RS02185	SM00422	helix_turn_helix, mercury resistance
CI103_RS02390	SM00507	HNH nucleases
CI103_RS02445	SM00878	Biotin carboxylase C-terminal domain
CI103_RS02480	SM00052	Putative diguanylate phosphodiesterase
CI103_RS02480	SM00267	diguanylate cyclase
CI103_RS02510	SM00316	Ribosomal protein S1-like RNA-binding domain
CI103_RS02570	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CI103_RS02575	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CI103_RS02635	SM00729	Elongator protein 3, MiaB family, Radical SAM
CI103_RS02645	SM00829	Enoylreductase
CI103_RS02655	SM00073	Histidine Phosphotransfer domain
CI103_RS02655	SM00091	PAS domain
CI103_RS02655	SM00387	Histidine kinase-like ATPases
CI103_RS02655	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS02655	SM00448	cheY-homologous receiver domain
CI103_RS02695	SM00382	ATPases associated with a variety of cellular activities
CI103_RS02730	SM00382	ATPases associated with a variety of cellular activities
CI103_RS02805	SM01103	CI103_RS02805
CI103_RS02820	SM00382	ATPases associated with a variety of cellular activities
CI103_RS02875	SM00316	Ribosomal protein S1-like RNA-binding domain
CI103_RS02895	SM01387	CI103_RS02895
CI103_RS02905	SM00316	Ribosomal protein S1-like RNA-binding domain
CI103_RS02905	SM00322	K homology RNA-binding domain
CI103_RS02910	SM00028	Tetratricopeptide repeats
CI103_RS02920	SM00487	DEAD-like helicases superfamily
CI103_RS02920	SM00490	helicase superfamily c-terminal domain
CI103_RS02970	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CI103_RS02980	SM00749	bacterial OsmY and nodulation domain
CI103_RS03010	SM00420	helix_turn_helix, Deoxyribose operon repressor
CI103_RS03010	SM01134	CI103_RS03010
CI103_RS03015	SM00829	Enoylreductase
CI103_RS03060	SM00420	helix_turn_helix, Deoxyribose operon repressor
CI103_RS03060	SM01134	CI103_RS03060
CI103_RS03070	SM00858	CI103_RS03070
CI103_RS03165	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS03165	SM00895	CI103_RS03165
CI103_RS03180	SM00858	CI103_RS03180
CI103_RS03210	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS03215	SM00873	B3/4 domain
CI103_RS03240	SM00382	ATPases associated with a variety of cellular activities
CI103_RS03260	SM01133	CI103_RS03260
CI103_RS03290	SM01120	CI103_RS03290
CI103_RS03300	SM01120	CI103_RS03300
CI103_RS03330	SM00091	PAS domain
CI103_RS03330	SM00382	ATPases associated with a variety of cellular activities
CI103_RS03395	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS03395	SM00073	Histidine Phosphotransfer domain
CI103_RS03395	SM00387	Histidine kinase-like ATPases
CI103_RS03395	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS03395	SM00448	cheY-homologous receiver domain
CI103_RS03400	SM00421	helix_turn_helix, Lux Regulon
CI103_RS03400	SM00448	cheY-homologous receiver domain
CI103_RS03420	SM00986	Uracil DNA glycosylase superfamily
CI103_RS03420	SM00987	UreE urease accessory protein, C-terminal domain 
CI103_RS03430	SM00400	zinc finger
CI103_RS03430	SM00493	CI103_RS03430
CI103_RS03430	SM00766	DNA primase DnaG DnaB-binding
CI103_RS03465	SM00988	UreE urease accessory protein, N-terminal domain
CI103_RS03495	SM01207	CI103_RS03495
CI103_RS03500	SM00905	Dihydroneopterin aldolase
CI103_RS03515	SM00287	Bacterial SH3 domain homologues
CI103_RS03520	SM01118	CI103_RS03520
CI103_RS03595	SM00387	Histidine kinase-like ATPases
CI103_RS03595	SM00433	TopoisomeraseII
CI103_RS03610	SM00387	Histidine kinase-like ATPases
CI103_RS03610	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS03615	SM00448	cheY-homologous receiver domain
CI103_RS03615	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS03625	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS03625	SM00871	Bacterial transcription activator, effector binding domain
CI103_RS03630	SM00434	DNA Topoisomerase IV
CI103_RS03635	SM00563	Phosphate acyltransferases
CI103_RS03645	SM00729	Elongator protein 3, MiaB family, Radical SAM
CI103_RS03665	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS03765	SM00116	Domain in cystathionine beta-synthase and other proteins.
CI103_RS03810	SM00382	ATPases associated with a variety of cellular activities
CI103_RS04030	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS04035	SM00357	Cold shock protein domain
CI103_RS04045	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS04140	SM00478	endonuclease III
CI103_RS04140	SM00525	CI103_RS04140
CI103_RS04160	SM00729	Elongator protein 3, MiaB family, Radical SAM
CI103_RS04170	SM01152	CI103_RS04170
CI103_RS04185	SM00382	ATPases associated with a variety of cellular activities
CI103_RS04190	SM00421	helix_turn_helix, Lux Regulon
CI103_RS04195	SM00732	Likely ribonuclease with RNase H fold.
CI103_RS04220	SM00731	SprT homologues.
CI103_RS04290	SM00346	helix_turn_helix isocitrate lyase regulation
CI103_RS04350	SM00861	Transketolase, pyrimidine binding domain
CI103_RS04355	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CI103_RS04420	SM01011	Aminopeptidase P, N-terminal domain
CI103_RS04485	SM01022	CI103_RS04485
CI103_RS04550	SM00257	Lysin motif
CI103_RS04605	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CI103_RS04660	SM00052	Putative diguanylate phosphodiesterase
CI103_RS04720	SM00347	helix_turn_helix multiple antibiotic resistance protein
CI103_RS04760	SM00052	Putative diguanylate phosphodiesterase
CI103_RS04765	SM00421	helix_turn_helix, Lux Regulon
CI103_RS04835	SM00354	helix_turn _helix lactose operon repressor
CI103_RS04845	SM00640	Glycosyl hydrolases family 32
CI103_RS04860	SM00382	ATPases associated with a variety of cellular activities
CI103_RS04895	SM00354	helix_turn _helix lactose operon repressor
CI103_RS04910	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS04910	SM00895	CI103_RS04910
CI103_RS04920	SM00354	helix_turn _helix lactose operon repressor
CI103_RS04935	SM00563	Phosphate acyltransferases
CI103_RS04960	SM00927	DNA mismatch repair enzyme MutH
CI103_RS04970	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CI103_RS05020	SM00382	ATPases associated with a variety of cellular activities
CI103_RS05035	SM00646	CI103_RS05035
CI103_RS05060	SM00877	CI103_RS05060
CI103_RS05065	SM00877	CI103_RS05065
CI103_RS05105	SM00877	CI103_RS05105
CI103_RS05110	SM00877	CI103_RS05110
CI103_RS05140	SM00877	CI103_RS05140
CI103_RS05145	SM00877	CI103_RS05145
CI103_RS05155	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS05235	SM00382	ATPases associated with a variety of cellular activities
CI103_RS05270	SM00925	MltA specific insert domain
CI103_RS05310	SM00420	helix_turn_helix, Deoxyribose operon repressor
CI103_RS05310	SM01134	CI103_RS05310
CI103_RS05335	SM01007	Class II Aldolase and Adducin N-terminal domain
CI103_RS05345	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CI103_RS05345	SM00475	5'-3' exonuclease
CI103_RS05350	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS05350	SM00382	ATPases associated with a variety of cellular activities
CI103_RS05370	SM00382	ATPases associated with a variety of cellular activities
CI103_RS05400	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS05450	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CI103_RS05455	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CI103_RS05465	SM00073	Histidine Phosphotransfer domain
CI103_RS05465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CI103_RS05465	SM00387	Histidine kinase-like ATPases
CI103_RS05465	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS05465	SM00448	cheY-homologous receiver domain
CI103_RS05475	SM00954	Region found in RelA / SpoT proteins
CI103_RS05490	SM01192	CI103_RS05490
CI103_RS05490	SM01193	CI103_RS05490
CI103_RS05585	SM00257	Lysin motif
CI103_RS05610	SM00347	helix_turn_helix multiple antibiotic resistance protein
CI103_RS05635	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CI103_RS05635	SM00534	ATPase domain of DNA mismatch repair MUTS family
CI103_RS05655	SM00382	ATPases associated with a variety of cellular activities
CI103_RS05715	SM00382	ATPases associated with a variety of cellular activities
CI103_RS05725	SM00354	helix_turn _helix lactose operon repressor
CI103_RS05770	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CI103_RS05770	SM00382	ATPases associated with a variety of cellular activities
CI103_RS05865	SM00354	helix_turn _helix lactose operon repressor
CI103_RS05890	SM00849	Metallo-beta-lactamase superfamily
CI103_RS05900	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CI103_RS05900	SM00382	ATPases associated with a variety of cellular activities
CI103_RS05905	SM00116	Domain in cystathionine beta-synthase and other proteins.
CI103_RS05910	SM00420	helix_turn_helix, Deoxyribose operon repressor
CI103_RS05910	SM01134	CI103_RS05910
CI103_RS05950	SM00382	ATPases associated with a variety of cellular activities
CI103_RS05970	SM00382	ATPases associated with a variety of cellular activities
CI103_RS05980	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CI103_RS06020	SM00749	bacterial OsmY and nodulation domain
CI103_RS06045	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS06050	SM00917	LeuA allosteric (dimerisation) domain
CI103_RS06065	SM00347	helix_turn_helix multiple antibiotic resistance protein
CI103_RS06090	SM00382	ATPases associated with a variety of cellular activities
CI103_RS06120	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS06150	SM00528	Domain in histone-like proteins of HNS family
CI103_RS06165	SM00450	Rhodanese Homology Domain
CI103_RS06170	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CI103_RS06185	SM00382	ATPases associated with a variety of cellular activities
CI103_RS06235	SM00421	helix_turn_helix, Lux Regulon
CI103_RS06240	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS06260	SM01007	Class II Aldolase and Adducin N-terminal domain
CI103_RS06265	SM00382	ATPases associated with a variety of cellular activities
CI103_RS06270	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS06310	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS06315	SM00903	Flavin reductase like domain
CI103_RS06375	SM01091	Transporter associated domain
CI103_RS06385	SM00382	ATPases associated with a variety of cellular activities
CI103_RS06385	SM00962	SRP54-type protein, GTPase domain
CI103_RS06385	SM00963	SRP54-type protein, helical bundle domain
CI103_RS06425	SM00267	diguanylate cyclase
CI103_RS06440	SM00830	Chorismate mutase type II
CI103_RS06450	SM00830	Chorismate mutase type II
CI103_RS06465	SM00363	S4 RNA-binding domain
CI103_RS06475	SM00382	ATPases associated with a variety of cellular activities
CI103_RS06475	SM01086	C-terminal, D2-small domain, of ClpB protein
CI103_RS06510	SM00155	Phospholipase D. Active site motifs.
CI103_RS06515	SM00881	CoA binding domain
CI103_RS06520	SM01144	CI103_RS06520
CI103_RS06535	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CI103_RS06540	SM00986	Uracil DNA glycosylase superfamily
CI103_RS06540	SM00987	UreE urease accessory protein, C-terminal domain 
CI103_RS06550	SM00487	DEAD-like helicases superfamily
CI103_RS06550	SM00490	helicase superfamily c-terminal domain
CI103_RS06595	SM00358	Double-stranded RNA binding motif
CI103_RS06595	SM00535	Ribonuclease III family
CI103_RS06640	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS06645	SM01211	CI103_RS06645
CI103_RS06650	SM00387	Histidine kinase-like ATPases
CI103_RS06650	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS06660	SM00382	ATPases associated with a variety of cellular activities
CI103_RS06660	SM00448	cheY-homologous receiver domain
CI103_RS06665	SM00938	Nitrogen regulatory protein P-II
CI103_RS06695	SM00028	Tetratricopeptide repeats
CI103_RS06765	SM00271	DnaJ molecular chaperone homology domain
CI103_RS06800	SM00450	Rhodanese Homology Domain
CI103_RS06805	SM01359	CI103_RS06805
CI103_RS06805	SM01360	CI103_RS06805
CI103_RS06815	SM00562	CI103_RS06815
CI103_RS06825	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS06845	SM00564	beta-propeller repeat
CI103_RS06870	SM00116	Domain in cystathionine beta-synthase and other proteins.
CI103_RS06870	SM01240	CI103_RS06870
CI103_RS07125	SM01040	BRO family, N-terminal domain
CI103_RS07205	SM00052	Putative diguanylate phosphodiesterase
CI103_RS07205	SM00267	diguanylate cyclase
CI103_RS07285	SM01130	CI103_RS07285
CI103_RS07355	SM00861	Transketolase, pyrimidine binding domain
CI103_RS07365	SM00919	Malic enzyme, NAD binding domain
CI103_RS07365	SM01274	CI103_RS07365
CI103_RS07370	SM00877	CI103_RS07370
CI103_RS07395	SM00877	CI103_RS07395
CI103_RS07440	SM00877	CI103_RS07440
CI103_RS07445	SM00877	CI103_RS07445
CI103_RS07450	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS07460	SM00646	CI103_RS07460
CI103_RS07505	SM00382	ATPases associated with a variety of cellular activities
CI103_RS07520	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS07560	SM00771	ZipA, C-terminal domain (FtsZ-binding)
CI103_RS07565	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CI103_RS07565	SM00292	breast cancer carboxy-terminal domain
CI103_RS07565	SM00532	Ligase N family
CI103_RS07630	SM00052	Putative diguanylate phosphodiesterase
CI103_RS07630	SM00267	diguanylate cyclase
CI103_RS07670	SM00448	cheY-homologous receiver domain
CI103_RS07670	SM00850	LytTr DNA-binding domain
CI103_RS07675	SM00387	Histidine kinase-like ATPases
CI103_RS07755	SM00463	Small MutS-related domain
CI103_RS07795	SM00825	Beta-ketoacyl synthase
CI103_RS07815	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CI103_RS07860	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS07865	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS07880	SM00382	ATPases associated with a variety of cellular activities
CI103_RS07895	SM00905	Dihydroneopterin aldolase
CI103_RS07950	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CI103_RS07990	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CI103_RS07995	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CI103_RS07995	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CI103_RS08065	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CI103_RS08090	SM00852	Probable molybdopterin binding domain
CI103_RS08095	SM00346	helix_turn_helix isocitrate lyase regulation
CI103_RS08170	SM00434	DNA Topoisomerase IV
CI103_RS08175	SM00387	Histidine kinase-like ATPases
CI103_RS08175	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS08175	SM00448	cheY-homologous receiver domain
CI103_RS08180	SM00421	helix_turn_helix, Lux Regulon
CI103_RS08180	SM00448	cheY-homologous receiver domain
CI103_RS08200	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS08210	SM00382	ATPases associated with a variety of cellular activities
CI103_RS08215	SM00116	Domain in cystathionine beta-synthase and other proteins.
CI103_RS08215	SM00924	MgtE intracellular N domain
CI103_RS08260	SM00420	helix_turn_helix, Deoxyribose operon repressor
CI103_RS08260	SM01134	CI103_RS08260
CI103_RS08285	SM00487	DEAD-like helicases superfamily
CI103_RS08285	SM00490	helicase superfamily c-terminal domain
CI103_RS08290	SM00363	S4 RNA-binding domain
CI103_RS08305	SM00382	ATPases associated with a variety of cellular activities
CI103_RS08325	SM00052	Putative diguanylate phosphodiesterase
CI103_RS08335	SM00014	Acid phosphatase homologues
CI103_RS08340	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CI103_RS08355	SM00841	Elongation factor P, C-terminal
CI103_RS08355	SM01185	CI103_RS08355
CI103_RS08395	SM00518	AP endonuclease family 2
CI103_RS08445	SM00354	helix_turn _helix lactose operon repressor
CI103_RS08455	SM00382	ATPases associated with a variety of cellular activities
CI103_RS08495	SM01061	CAT RNA binding domain
CI103_RS08540	SM01217	CI103_RS08540
CI103_RS08555	SM00382	ATPases associated with a variety of cellular activities
CI103_RS08570	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CI103_RS08575	SM00448	cheY-homologous receiver domain
CI103_RS08575	SM00850	LytTr DNA-binding domain
CI103_RS08640	SM01133	CI103_RS08640
CI103_RS08660	SM00354	helix_turn _helix lactose operon repressor
CI103_RS08690	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CI103_RS08710	SM00382	ATPases associated with a variety of cellular activities
CI103_RS08715	SM00382	ATPases associated with a variety of cellular activities
CI103_RS08720	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CI103_RS08730	SM00448	cheY-homologous receiver domain
CI103_RS08730	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS08735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CI103_RS08735	SM00387	Histidine kinase-like ATPases
CI103_RS08735	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS08765	SM00421	helix_turn_helix, Lux Regulon
CI103_RS08770	SM00448	cheY-homologous receiver domain
CI103_RS08770	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS08775	SM00387	Histidine kinase-like ATPases
CI103_RS08775	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS08785	SM00478	endonuclease III
CI103_RS08785	SM01009	AlkA N-terminal domain
CI103_RS08805	SM01091	Transporter associated domain
CI103_RS08815	SM00014	Acid phosphatase homologues
CI103_RS08830	SM00226	Low molecular weight phosphatase family
CI103_RS08910	SM01350	CI103_RS08910
CI103_RS08920	SM00984	UDP binding domain
CI103_RS08935	SM00382	ATPases associated with a variety of cellular activities
CI103_RS09035	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CI103_RS09040	SM00838	Elongation factor G C-terminus
CI103_RS09040	SM00889	Elongation factor G, domain IV
CI103_RS09050	SM00479	CI103_RS09050
CI103_RS09055	SM00936	Penicillin-binding protein 5, C-terminal domain 
CI103_RS09075	SM00871	Bacterial transcription activator, effector binding domain
CI103_RS09100	SM00996	S-adenosyl-L-homocysteine hydrolase
CI103_RS09100	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CI103_RS09140	SM00052	Putative diguanylate phosphodiesterase
CI103_RS09140	SM00267	diguanylate cyclase
CI103_RS09175	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CI103_RS09175	SM00267	diguanylate cyclase
CI103_RS09220	SM00528	Domain in histone-like proteins of HNS family
CI103_RS09265	SM00028	Tetratricopeptide repeats
CI103_RS09370	SM00829	Enoylreductase
CI103_RS09625	SM00822	CI103_RS09625
CI103_RS09625	SM00823	Phosphopantetheine attachment site
CI103_RS09625	SM00824	Thioesterase
CI103_RS09625	SM00825	Beta-ketoacyl synthase
CI103_RS09625	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CI103_RS09630	SM00823	Phosphopantetheine attachment site
CI103_RS09635	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS09640	SM00382	ATPases associated with a variety of cellular activities
CI103_RS09645	SM00382	ATPases associated with a variety of cellular activities
CI103_RS09690	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CI103_RS09715	SM00267	diguanylate cyclase
CI103_RS09730	SM00421	helix_turn_helix, Lux Regulon
CI103_RS09740	SM00642	Alpha-amylase domain
CI103_RS09745	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS09745	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CI103_RS09760	SM00382	ATPases associated with a variety of cellular activities
CI103_RS09765	SM00421	helix_turn_helix, Lux Regulon
CI103_RS09775	SM00421	helix_turn_helix, Lux Regulon
CI103_RS09775	SM00448	cheY-homologous receiver domain
CI103_RS09780	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CI103_RS09780	SM00465	GIY-YIG type nucleases (URI domain)
CI103_RS09805	SM01130	CI103_RS09805
CI103_RS09875	SM00382	ATPases associated with a variety of cellular activities
CI103_RS09910	SM00836	DALR anticodon binding domain
CI103_RS09910	SM01016	Arginyl tRNA synthetase N terminal dom
CI103_RS09970	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CI103_RS09975	SM00382	ATPases associated with a variety of cellular activities
CI103_RS09985	SM00382	ATPases associated with a variety of cellular activities
CI103_RS09995	SM00257	Lysin motif
CI103_RS10060	SM00479	CI103_RS10060
CI103_RS10125	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CI103_RS10130	SM00945	ProQ/FINO family
CI103_RS10135	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CI103_RS10135	SM00245	tail specific protease
CI103_RS10150	SM00346	helix_turn_helix isocitrate lyase regulation
CI103_RS10185	SM00357	Cold shock protein domain
CI103_RS10230	SM01091	Transporter associated domain
CI103_RS10235	SM00052	Putative diguanylate phosphodiesterase
CI103_RS10265	SM00487	DEAD-like helicases superfamily
CI103_RS10265	SM00491	CI103_RS10265
CI103_RS10285	SM00341	Helicase and RNase D C-terminal
CI103_RS10285	SM00474	3'-5' exonuclease
CI103_RS10335	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS10350	SM01005	Alanine racemase, C-terminal domain
CI103_RS10355	SM01091	Transporter associated domain
CI103_RS10390	SM00460	Transglutaminase/protease-like homologues
CI103_RS10460	SM00382	ATPases associated with a variety of cellular activities
CI103_RS10465	SM00382	ATPases associated with a variety of cellular activities
CI103_RS10725	SM00422	helix_turn_helix, mercury resistance
CI103_RS10735	SM01400	CI103_RS10735
CI103_RS10760	SM00937	CI103_RS10760
CI103_RS10810	SM01012	CI103_RS10810
CI103_RS10825	SM00382	ATPases associated with a variety of cellular activities
CI103_RS10835	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CI103_RS10845	SM00421	helix_turn_helix, Lux Regulon
CI103_RS10845	SM00448	cheY-homologous receiver domain
CI103_RS10850	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CI103_RS10850	SM00387	Histidine kinase-like ATPases
CI103_RS10860	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CI103_RS10885	SM00344	helix_turn_helix ASNC type
CI103_RS10935	SM00448	cheY-homologous receiver domain
CI103_RS10945	SM00528	Domain in histone-like proteins of HNS family
CI103_RS10985	SM00382	ATPases associated with a variety of cellular activities
CI103_RS10990	SM00382	ATPases associated with a variety of cellular activities
CI103_RS11005	SM00155	Phospholipase D. Active site motifs.
CI103_RS11015	SM00867	YceI-like domain 
CI103_RS11055	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CI103_RS11085	SM00873	B3/4 domain
CI103_RS11085	SM00874	tRNA synthetase B5 domain
CI103_RS11085	SM00896	Ferredoxin-fold anticodon binding domain
CI103_RS11090	SM00411	bacterial (prokaryotic) histone like domain
CI103_RS11130	SM00382	ATPases associated with a variety of cellular activities
CI103_RS11225	SM00382	ATPases associated with a variety of cellular activities
CI103_RS11295	SM00382	ATPases associated with a variety of cellular activities
CI103_RS11365	SM00382	ATPases associated with a variety of cellular activities
CI103_RS11380	SM00346	helix_turn_helix isocitrate lyase regulation
CI103_RS11405	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CI103_RS11425	SM00450	Rhodanese Homology Domain
CI103_RS11450	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS11465	SM00382	ATPases associated with a variety of cellular activities
CI103_RS11475	SM00382	ATPases associated with a variety of cellular activities
CI103_RS11500	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS11500	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CI103_RS11510	SM00382	ATPases associated with a variety of cellular activities
CI103_RS11545	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CI103_RS11570	SM00382	ATPases associated with a variety of cellular activities
CI103_RS11595	SM00382	ATPases associated with a variety of cellular activities
CI103_RS11670	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CI103_RS11670	SM00387	Histidine kinase-like ATPases
CI103_RS11670	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS11675	SM00448	cheY-homologous receiver domain
CI103_RS11675	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS11710	SM00822	CI103_RS11710
CI103_RS11750	SM00882	Coenzyme A transferase
CI103_RS11755	SM00882	Coenzyme A transferase
CI103_RS11795	SM00382	ATPases associated with a variety of cellular activities
CI103_RS11875	SM00382	ATPases associated with a variety of cellular activities
CI103_RS11880	SM00382	ATPases associated with a variety of cellular activities
CI103_RS11900	SM01059	Chloramphenicol acetyltransferase
CI103_RS11910	SM00420	helix_turn_helix, Deoxyribose operon repressor
CI103_RS11910	SM01134	CI103_RS11910
CI103_RS11920	SM00947	Carbonic anhydrase
CI103_RS11940	SM00849	Metallo-beta-lactamase superfamily
CI103_RS12015	SM00354	helix_turn _helix lactose operon repressor
CI103_RS12035	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS12050	SM00479	CI103_RS12050
CI103_RS12100	SM00347	helix_turn_helix multiple antibiotic resistance protein
CI103_RS12105	SM00267	diguanylate cyclase
CI103_RS12130	SM00363	S4 RNA-binding domain
CI103_RS12155	SM00478	endonuclease III
CI103_RS12155	SM00525	CI103_RS12155
CI103_RS12165	SM00900	CI103_RS12165
CI103_RS12250	SM00829	Enoylreductase
CI103_RS12255	SM00564	beta-propeller repeat
CI103_RS12275	SM01150	CI103_RS12275
CI103_RS12285	SM00829	Enoylreductase
CI103_RS12325	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS12335	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS12375	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS12385	SM00382	ATPases associated with a variety of cellular activities
CI103_RS12460	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS12465	SM00829	Enoylreductase
CI103_RS12535	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS12550	SM00382	ATPases associated with a variety of cellular activities
CI103_RS12555	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS12585	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS12590	SM00903	Flavin reductase like domain
CI103_RS12595	SM00382	ATPases associated with a variety of cellular activities
CI103_RS12630	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CI103_RS12650	SM00346	helix_turn_helix isocitrate lyase regulation
CI103_RS12655	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CI103_RS12685	SM00822	CI103_RS12685
CI103_RS12695	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CI103_RS12750	SM00382	ATPases associated with a variety of cellular activities
CI103_RS12770	SM00829	Enoylreductase
CI103_RS12780	SM00347	helix_turn_helix multiple antibiotic resistance protein
CI103_RS12785	SM00382	ATPases associated with a variety of cellular activities
CI103_RS12805	SM00919	Malic enzyme, NAD binding domain
CI103_RS12805	SM01274	CI103_RS12805
CI103_RS12815	SM00849	Metallo-beta-lactamase superfamily
CI103_RS12865	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS12950	SM00729	Elongator protein 3, MiaB family, Radical SAM
CI103_RS12985	SM00448	cheY-homologous receiver domain
CI103_RS12985	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS12990	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CI103_RS12990	SM00387	Histidine kinase-like ATPases
CI103_RS12990	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS13025	SM00382	ATPases associated with a variety of cellular activities
CI103_RS13050	SM00354	helix_turn _helix lactose operon repressor
CI103_RS13055	SM00091	PAS domain
CI103_RS13055	SM00267	diguanylate cyclase
CI103_RS13070	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS13070	SM00895	CI103_RS13070
CI103_RS13090	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS13105	SM00855	Phosphoglycerate mutase family
CI103_RS13115	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS13140	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS13150	SM01022	CI103_RS13150
CI103_RS13170	SM00825	Beta-ketoacyl synthase
CI103_RS13190	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CI103_RS13225	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS13240	SM00382	ATPases associated with a variety of cellular activities
CI103_RS13290	SM01236	CI103_RS13290
CI103_RS13320	SM00354	helix_turn _helix lactose operon repressor
CI103_RS13385	SM00849	Metallo-beta-lactamase superfamily
CI103_RS13415	SM00382	ATPases associated with a variety of cellular activities
CI103_RS13420	SM00354	helix_turn _helix lactose operon repressor
CI103_RS13450	SM00257	Lysin motif
CI103_RS13470	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CI103_RS13470	SM00387	Histidine kinase-like ATPases
CI103_RS13470	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS13475	SM00448	cheY-homologous receiver domain
CI103_RS13525	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CI103_RS13530	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS13550	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS13555	SM00420	helix_turn_helix, Deoxyribose operon repressor
CI103_RS13555	SM01134	CI103_RS13555
CI103_RS13565	SM01133	CI103_RS13565
CI103_RS13570	SM00420	helix_turn_helix, Deoxyribose operon repressor
CI103_RS13570	SM01134	CI103_RS13570
CI103_RS13600	SM00882	Coenzyme A transferase
CI103_RS13605	SM00822	CI103_RS13605
CI103_RS13655	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS13655	SM00866	CI103_RS13655
CI103_RS13690	SM00052	Putative diguanylate phosphodiesterase
CI103_RS13690	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CI103_RS13690	SM00267	diguanylate cyclase
CI103_RS13750	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS13795	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS13825	SM00382	ATPases associated with a variety of cellular activities
CI103_RS13925	SM00267	diguanylate cyclase
CI103_RS13960	SM00420	helix_turn_helix, Deoxyribose operon repressor
CI103_RS13960	SM01134	CI103_RS13960
CI103_RS13980	SM01130	CI103_RS13980
CI103_RS14000	SM00822	CI103_RS14000
CI103_RS14020	SM00347	helix_turn_helix multiple antibiotic resistance protein
CI103_RS14025	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS14045	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS14050	SM00382	ATPases associated with a variety of cellular activities
CI103_RS14080	SM00450	Rhodanese Homology Domain
CI103_RS14085	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS14100	SM00354	helix_turn _helix lactose operon repressor
CI103_RS14105	SM01038	Beta galactosidase small chain
CI103_RS14130	SM00420	helix_turn_helix, Deoxyribose operon repressor
CI103_RS14130	SM01134	CI103_RS14130
CI103_RS14145	SM01007	Class II Aldolase and Adducin N-terminal domain
CI103_RS14160	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS14175	SM00421	helix_turn_helix, Lux Regulon
CI103_RS14185	SM00052	Putative diguanylate phosphodiesterase
CI103_RS14185	SM01034	Sensors of blue-light using FAD
CI103_RS14210	SM00421	helix_turn_helix, Lux Regulon
CI103_RS14220	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS14240	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS14240	SM00895	CI103_RS14240
CI103_RS14285	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CI103_RS14410	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CI103_RS14435	SM00387	Histidine kinase-like ATPases
CI103_RS14440	SM00448	cheY-homologous receiver domain
CI103_RS14450	SM00900	CI103_RS14450
CI103_RS14495	SM00998	Adenylosuccinate lyase C-terminus
CI103_RS14505	SM00882	Coenzyme A transferase
CI103_RS14510	SM00882	Coenzyme A transferase
CI103_RS14515	SM00346	helix_turn_helix isocitrate lyase regulation
CI103_RS14520	SM00463	Small MutS-related domain
CI103_RS14560	SM00100	Cyclic nucleotide-monophosphate binding domain
CI103_RS14560	SM00419	helix_turn_helix, cAMP Regulatory protein
CI103_RS14580	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CI103_RS14580	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CI103_RS14615	SM00448	cheY-homologous receiver domain
CI103_RS14615	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS14625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CI103_RS14625	SM00387	Histidine kinase-like ATPases
CI103_RS14625	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS14655	SM00354	helix_turn _helix lactose operon repressor
CI103_RS14710	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CI103_RS14765	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CI103_RS14780	SM00347	helix_turn_helix multiple antibiotic resistance protein
CI103_RS14805	SM00382	ATPases associated with a variety of cellular activities
CI103_RS14805	SM00487	DEAD-like helicases superfamily
CI103_RS14805	SM00490	helicase superfamily c-terminal domain
CI103_RS14805	SM00847	Helicase associated domain (HA2)  Add an annotation
CI103_RS14900	SM00829	Enoylreductase
CI103_RS14915	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS14960	SM00890	Domain of unknown function
CI103_RS14985	SM00487	DEAD-like helicases superfamily
CI103_RS14985	SM00490	helicase superfamily c-terminal domain
CI103_RS15005	SM00420	helix_turn_helix, Deoxyribose operon repressor
CI103_RS15005	SM01134	CI103_RS15005
CI103_RS15030	SM00344	helix_turn_helix ASNC type
CI103_RS15050	SM00382	ATPases associated with a variety of cellular activities
CI103_RS15050	SM00930	CI103_RS15050
CI103_RS15065	SM00829	Enoylreductase
CI103_RS15080	SM00849	Metallo-beta-lactamase superfamily
CI103_RS15105	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS15110	SM00822	CI103_RS15110
CI103_RS15120	SM00822	CI103_RS15120
CI103_RS15205	SM00382	ATPases associated with a variety of cellular activities
CI103_RS15205	SM01086	C-terminal, D2-small domain, of ClpB protein
CI103_RS15455	SM00778	Zinc-binding domain of primase-helicase
CI103_RS15460	SM00487	DEAD-like helicases superfamily
CI103_RS15460	SM00490	helicase superfamily c-terminal domain
CI103_RS15470	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS15475	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS15510	SM00244	prohibitin homologues
CI103_RS15555	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CI103_RS15625	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CI103_RS15640	SM00091	PAS domain
CI103_RS15640	SM00382	ATPases associated with a variety of cellular activities
CI103_RS15685	SM00382	ATPases associated with a variety of cellular activities
CI103_RS15700	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS15705	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS15730	SM00901	CI103_RS15730
CI103_RS15760	SM00857	Resolvase, N terminal domain
CI103_RS15860	SM00635	Bacterial Ig-like domain 2
CI103_RS16030	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS16095	SM00382	ATPases associated with a variety of cellular activities
CI103_RS16100	SM00382	ATPases associated with a variety of cellular activities
CI103_RS16125	SM00357	Cold shock protein domain
CI103_RS16125	SM00955	CI103_RS16125
CI103_RS16135	SM00420	helix_turn_helix, Deoxyribose operon repressor
CI103_RS16135	SM01134	CI103_RS16135
CI103_RS16150	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CI103_RS16155	SM00028	Tetratricopeptide repeats
CI103_RS16165	SM00014	Acid phosphatase homologues
CI103_RS16195	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CI103_RS16195	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CI103_RS16195	SM00493	CI103_RS16195
CI103_RS16215	SM00822	CI103_RS16215
CI103_RS16225	SM00363	S4 RNA-binding domain
CI103_RS16245	SM00481	DNA polymerase alpha chain like domain
CI103_RS16280	SM01329	CI103_RS16280
CI103_RS16295	SM00347	helix_turn_helix multiple antibiotic resistance protein
CI103_RS16300	SM00829	Enoylreductase
CI103_RS16320	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CI103_RS16385	SM01060	CI103_RS16385
CI103_RS16400	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS16430	SM00465	GIY-YIG type nucleases (URI domain)
CI103_RS16495	SM00382	ATPases associated with a variety of cellular activities
CI103_RS16500	SM00450	Rhodanese Homology Domain
CI103_RS16515	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CI103_RS16520	SM00829	Enoylreductase
CI103_RS16525	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CI103_RS16525	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CI103_RS16525	SM00493	CI103_RS16525
CI103_RS16535	SM00014	Acid phosphatase homologues
CI103_RS16560	SM00870	CI103_RS16560
CI103_RS16575	SM00420	helix_turn_helix, Deoxyribose operon repressor
CI103_RS16575	SM01134	CI103_RS16575
CI103_RS16595	SM00829	Enoylreductase
CI103_RS16605	SM00829	Enoylreductase
CI103_RS16610	SM00636	CI103_RS16610
CI103_RS16615	SM00507	HNH nucleases
CI103_RS16630	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CI103_RS16650	SM00763	PrkA AAA domain
CI103_RS16685	SM00822	CI103_RS16685
CI103_RS16735	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS16765	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CI103_RS16765	SM00267	diguanylate cyclase
CI103_RS16805	SM00870	CI103_RS16805
CI103_RS16810	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CI103_RS16815	SM00267	diguanylate cyclase
CI103_RS16815	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CI103_RS16830	SM00052	Putative diguanylate phosphodiesterase
CI103_RS16900	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CI103_RS16905	SM01329	CI103_RS16905
CI103_RS16940	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS16945	SM00448	cheY-homologous receiver domain
CI103_RS16945	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS16950	SM00387	Histidine kinase-like ATPases
CI103_RS16955	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CI103_RS16965	SM00382	ATPases associated with a variety of cellular activities
CI103_RS17015	SM00382	ATPases associated with a variety of cellular activities
CI103_RS17025	SM00487	DEAD-like helicases superfamily
CI103_RS17025	SM00490	helicase superfamily c-terminal domain
CI103_RS17025	SM00982	CI103_RS17025
CI103_RS17025	SM01058	CarD-like/TRCF domain
CI103_RS17030	SM00257	Lysin motif
CI103_RS17125	SM00825	Beta-ketoacyl synthase
CI103_RS17135	SM00822	CI103_RS17135
CI103_RS17140	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CI103_RS17170	SM00363	S4 RNA-binding domain
CI103_RS17175	SM00316	Ribosomal protein S1-like RNA-binding domain
CI103_RS17250	SM00450	Rhodanese Homology Domain
CI103_RS17305	SM00506	Appr-1"-p processing enzyme
CI103_RS17320	SM00481	DNA polymerase alpha chain like domain
CI103_RS17445	SM00903	Flavin reductase like domain
CI103_RS17515	SM01230	CI103_RS17515
CI103_RS17525	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS17545	SM01329	CI103_RS17545
CI103_RS17585	SM00052	Putative diguanylate phosphodiesterase
CI103_RS17615	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS17625	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CI103_RS17630	SM00992	Hemimethylated DNA-binding protein YccV like
CI103_RS17635	SM00881	CoA binding domain
CI103_RS17640	SM00851	MGS-like domain
CI103_RS17720	SM00382	ATPases associated with a variety of cellular activities
CI103_RS17725	SM00981	CI103_RS17725
CI103_RS17750	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS17765	SM00382	ATPases associated with a variety of cellular activities
CI103_RS17800	SM00344	helix_turn_helix ASNC type
CI103_RS17800	SM00419	helix_turn_helix, cAMP Regulatory protein
CI103_RS17820	SM00849	Metallo-beta-lactamase superfamily
CI103_RS17890	SM00382	ATPases associated with a variety of cellular activities
CI103_RS17895	SM00849	Metallo-beta-lactamase superfamily
CI103_RS17900	SM00411	bacterial (prokaryotic) histone like domain
CI103_RS17905	SM00316	Ribosomal protein S1-like RNA-binding domain
CI103_RS17970	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CI103_RS17980	SM00382	ATPases associated with a variety of cellular activities
CI103_RS17990	SM00843	CI103_RS17990
CI103_RS17995	SM00344	helix_turn_helix ASNC type
CI103_RS18010	SM00382	ATPases associated with a variety of cellular activities
CI103_RS18015	SM00382	ATPases associated with a variety of cellular activities
CI103_RS18025	SM00316	Ribosomal protein S1-like RNA-binding domain
CI103_RS18030	SM00382	ATPases associated with a variety of cellular activities
CI103_RS18030	SM01086	C-terminal, D2-small domain, of ClpB protein
CI103_RS18040	SM00357	Cold shock protein domain
CI103_RS18050	SM00382	ATPases associated with a variety of cellular activities
CI103_RS18115	SM00644	CI103_RS18115
CI103_RS18120	SM00267	diguanylate cyclase
CI103_RS18135	SM00382	ATPases associated with a variety of cellular activities
CI103_RS18140	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS18140	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CI103_RS18155	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS18155	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CI103_RS18160	SM00387	Histidine kinase-like ATPases
CI103_RS18160	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS18165	SM00448	cheY-homologous receiver domain
CI103_RS18165	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS18190	SM00382	ATPases associated with a variety of cellular activities
CI103_RS18510	SM00014	Acid phosphatase homologues
CI103_RS18515	SM00420	helix_turn_helix, Deoxyribose operon repressor
CI103_RS18515	SM01134	CI103_RS18515
CI103_RS18520	SM00936	Penicillin-binding protein 5, C-terminal domain 
CI103_RS18545	SM00729	Elongator protein 3, MiaB family, Radical SAM
CI103_RS18570	SM00382	ATPases associated with a variety of cellular activities
CI103_RS18580	SM00852	Probable molybdopterin binding domain
CI103_RS18610	SM00354	helix_turn _helix lactose operon repressor
CI103_RS18630	SM00382	ATPases associated with a variety of cellular activities
CI103_RS18645	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS18645	SM00866	CI103_RS18645
CI103_RS18660	SM00529	Helix-turn-helix diphteria tox regulatory element
CI103_RS18690	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS18690	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CI103_RS18700	SM00382	ATPases associated with a variety of cellular activities
CI103_RS18715	SM00903	Flavin reductase like domain
CI103_RS18740	SM00487	DEAD-like helicases superfamily
CI103_RS18740	SM00488	CI103_RS18740
CI103_RS18740	SM00491	CI103_RS18740
CI103_RS18745	SM00487	DEAD-like helicases superfamily
CI103_RS18745	SM00490	helicase superfamily c-terminal domain
CI103_RS18750	SM00861	Transketolase, pyrimidine binding domain
CI103_RS18760	SM00822	CI103_RS18760
CI103_RS18785	SM00382	ATPases associated with a variety of cellular activities
CI103_RS18810	SM00155	Phospholipase D. Active site motifs.
CI103_RS18840	SM00852	Probable molybdopterin binding domain
CI103_RS18845	SM00729	Elongator protein 3, MiaB family, Radical SAM
CI103_RS18865	SM00448	cheY-homologous receiver domain
CI103_RS18865	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS18870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CI103_RS18870	SM00387	Histidine kinase-like ATPases
CI103_RS18870	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS18880	SM00487	DEAD-like helicases superfamily
CI103_RS18880	SM00490	helicase superfamily c-terminal domain
CI103_RS18895	SM00382	ATPases associated with a variety of cellular activities
CI103_RS18915	SM00729	Elongator protein 3, MiaB family, Radical SAM
CI103_RS18915	SM00876	Biotin and Thiamin Synthesis associated domain
CI103_RS18955	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS18955	SM00866	CI103_RS18955
CI103_RS18995	SM00421	helix_turn_helix, Lux Regulon
CI103_RS19000	SM00422	helix_turn_helix, mercury resistance
CI103_RS19005	SM00052	Putative diguanylate phosphodiesterase
CI103_RS19005	SM01034	Sensors of blue-light using FAD
CI103_RS19035	SM00382	ATPases associated with a variety of cellular activities
CI103_RS19060	SM00382	ATPases associated with a variety of cellular activities
CI103_RS19085	SM00855	Phosphoglycerate mutase family
CI103_RS19215	SM00881	CoA binding domain
CI103_RS19230	SM00861	Transketolase, pyrimidine binding domain
CI103_RS19265	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CI103_RS19265	SM01232	CI103_RS19265
CI103_RS19290	SM00797	Allophanate hydrolase subunit 2
CI103_RS19295	SM00796	Allophanate hydrolase subunit 1
CI103_RS19340	SM00387	Histidine kinase-like ATPases
CI103_RS19340	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS19345	SM00448	cheY-homologous receiver domain
CI103_RS19345	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS19490	SM00729	Elongator protein 3, MiaB family, Radical SAM
CI103_RS19505	SM00116	Domain in cystathionine beta-synthase and other proteins.
CI103_RS19505	SM01091	Transporter associated domain
CI103_RS19515	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS19530	SM00382	ATPases associated with a variety of cellular activities
CI103_RS19540	SM00912	haemagglutination activity domain
CI103_RS19570	SM00855	Phosphoglycerate mutase family
CI103_RS19605	SM00936	Penicillin-binding protein 5, C-terminal domain 
CI103_RS19625	SM00729	Elongator protein 3, MiaB family, Radical SAM
CI103_RS19645	SM00357	Cold shock protein domain
CI103_RS19700	SM00470	ParB-like nuclease domain
CI103_RS19730	SM00382	ATPases associated with a variety of cellular activities
CI103_RS19760	SM01007	Class II Aldolase and Adducin N-terminal domain
CI103_RS19780	SM00354	helix_turn _helix lactose operon repressor
CI103_RS19825	SM00382	ATPases associated with a variety of cellular activities
CI103_RS19835	SM00822	CI103_RS19835
CI103_RS19845	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS19865	SM00822	CI103_RS19865
CI103_RS19905	SM00382	ATPases associated with a variety of cellular activities
CI103_RS19910	SM00823	Phosphopantetheine attachment site
CI103_RS19910	SM00824	Thioesterase
CI103_RS19915	SM00923	MbtH-like protein
CI103_RS19940	SM00861	Transketolase, pyrimidine binding domain
CI103_RS19975	SM00382	ATPases associated with a variety of cellular activities
CI103_RS20060	SM00382	ATPases associated with a variety of cellular activities
CI103_RS20065	SM00382	ATPases associated with a variety of cellular activities
CI103_RS20080	SM00822	CI103_RS20080
CI103_RS20085	SM00382	ATPases associated with a variety of cellular activities
CI103_RS20100	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS20105	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS20110	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS20145	SM00831	Cation transporter/ATPase, N-terminus
CI103_RS20160	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS20165	SM00849	Metallo-beta-lactamase superfamily
CI103_RS20215	SM00382	ATPases associated with a variety of cellular activities
CI103_RS20230	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS20245	SM00354	helix_turn _helix lactose operon repressor
CI103_RS20255	SM00421	helix_turn_helix, Lux Regulon
CI103_RS20360	SM00421	helix_turn_helix, Lux Regulon
CI103_RS20375	SM00822	CI103_RS20375
CI103_RS20395	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS20430	SM00382	ATPases associated with a variety of cellular activities
CI103_RS20465	SM00640	Glycosyl hydrolases family 32
CI103_RS20470	SM00354	helix_turn _helix lactose operon repressor
CI103_RS20485	SM00382	ATPases associated with a variety of cellular activities
CI103_RS20495	SM00354	helix_turn _helix lactose operon repressor
CI103_RS20545	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS20585	SM00421	helix_turn_helix, Lux Regulon
CI103_RS20610	SM00095	Transthyretin
CI103_RS20695	SM01040	BRO family, N-terminal domain
CI103_RS20700	SM01040	BRO family, N-terminal domain
CI103_RS20725	SM01252	CI103_RS20725
CI103_RS20735	SM00635	Bacterial Ig-like domain 2
CI103_RS20910	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS20995	SM00840	CI103_RS20995
CI103_RS21020	SM01001	AIR carboxylase
CI103_RS21030	SM00450	Rhodanese Homology Domain
CI103_RS21045	SM00382	ATPases associated with a variety of cellular activities
CI103_RS21055	SM00822	CI103_RS21055
CI103_RS21075	SM00382	ATPases associated with a variety of cellular activities
CI103_RS21080	SM00244	prohibitin homologues
CI103_RS21090	SM00422	helix_turn_helix, mercury resistance
CI103_RS21140	SM00387	Histidine kinase-like ATPases
CI103_RS21145	SM00493	CI103_RS21145
CI103_RS21155	SM00382	ATPases associated with a variety of cellular activities
CI103_RS21215	SM01266	CI103_RS21215
CI103_RS21225	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS21245	SM00354	helix_turn _helix lactose operon repressor
CI103_RS21285	SM00382	ATPases associated with a variety of cellular activities
CI103_RS21290	SM00052	Putative diguanylate phosphodiesterase
CI103_RS21310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS21355	SM00938	Nitrogen regulatory protein P-II
CI103_RS21360	SM00382	ATPases associated with a variety of cellular activities
CI103_RS21365	SM00382	ATPases associated with a variety of cellular activities
CI103_RS21370	SM00344	helix_turn_helix ASNC type
CI103_RS21400	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CI103_RS21410	SM00411	bacterial (prokaryotic) histone like domain
CI103_RS21415	SM00382	ATPases associated with a variety of cellular activities
CI103_RS21415	SM00464	Found in ATP-dependent protease La (LON)
CI103_RS21420	SM00382	ATPases associated with a variety of cellular activities
CI103_RS21420	SM00994	ClpX C4-type zinc finger
CI103_RS21420	SM01086	C-terminal, D2-small domain, of ClpB protein
CI103_RS21490	SM00346	helix_turn_helix isocitrate lyase regulation
CI103_RS21555	SM00981	CI103_RS21555
CI103_RS21570	SM00861	Transketolase, pyrimidine binding domain
CI103_RS21640	SM01323	CI103_RS21640
CI103_RS21710	SM00642	Alpha-amylase domain
CI103_RS21725	SM00091	PAS domain
CI103_RS21725	SM00387	Histidine kinase-like ATPases
CI103_RS21725	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS21730	SM00448	cheY-homologous receiver domain
CI103_RS21730	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS21795	SM00098	Alkaline phosphatase homologues
CI103_RS21850	SM01004	Delta-aminolevulinic acid dehydratase
CI103_RS21855	SM00563	Phosphate acyltransferases
CI103_RS21870	SM00382	ATPases associated with a variety of cellular activities
CI103_RS21875	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS21920	SM00382	ATPases associated with a variety of cellular activities
CI103_RS21925	SM00382	ATPases associated with a variety of cellular activities
CI103_RS21935	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS21935	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CI103_RS21940	SM00382	ATPases associated with a variety of cellular activities
CI103_RS21985	SM00382	ATPases associated with a variety of cellular activities
CI103_RS22035	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CI103_RS22100	SM00493	CI103_RS22100
CI103_RS22100	SM00778	Zinc-binding domain of primase-helicase
CI103_RS22100	SM00885	D5 N terminal like
CI103_RS22110	SM00421	helix_turn_helix, Lux Regulon
CI103_RS22120	SM00861	Transketolase, pyrimidine binding domain
CI103_RS22145	SM01133	CI103_RS22145
CI103_RS22220	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS22220	SM00895	CI103_RS22220
CI103_RS22280	SM00900	CI103_RS22280
CI103_RS22340	SM00479	CI103_RS22340
CI103_RS22355	SM00849	Metallo-beta-lactamase superfamily
CI103_RS22360	SM00257	Lysin motif
CI103_RS22425	SM00382	ATPases associated with a variety of cellular activities
CI103_RS22425	SM00930	CI103_RS22425
CI103_RS22470	SM01322	CI103_RS22470
CI103_RS22485	SM00977	TilS substrate C-terminal domain
CI103_RS22505	SM00481	DNA polymerase alpha chain like domain
CI103_RS22535	SM00935	Outer membrane protein (OmpH-like)
CI103_RS22545	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CI103_RS22595	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CI103_RS22615	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CI103_RS22620	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CI103_RS22665	SM00382	ATPases associated with a variety of cellular activities
CI103_RS22695	SM00642	Alpha-amylase domain
CI103_RS22710	SM00382	ATPases associated with a variety of cellular activities
CI103_RS22765	SM00487	DEAD-like helicases superfamily
CI103_RS22765	SM00490	helicase superfamily c-terminal domain
CI103_RS22765	SM00847	Helicase associated domain (HA2)  Add an annotation
CI103_RS22830	SM00382	ATPases associated with a variety of cellular activities
CI103_RS22835	SM00947	Carbonic anhydrase
CI103_RS22845	SM00564	beta-propeller repeat
CI103_RS22930	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS22930	SM00895	CI103_RS22930
CI103_RS22955	SM00644	CI103_RS22955
CI103_RS22980	SM01240	CI103_RS22980
CI103_RS23005	SM00957	SecA DEAD-like domain
CI103_RS23005	SM00958	SecA preprotein cross-linking domain
CI103_RS23020	SM00864	Tubulin/FtsZ family, GTPase domain
CI103_RS23020	SM00865	Tubulin/FtsZ family, C-terminal domain
CI103_RS23025	SM00842	Cell division protein FtsA
CI103_RS23100	SM00354	helix_turn _helix lactose operon repressor
CI103_RS23130	SM00917	LeuA allosteric (dimerisation) domain
CI103_RS23135	SM01329	CI103_RS23135
CI103_RS23205	SM00382	ATPases associated with a variety of cellular activities
CI103_RS23215	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS23230	SM01007	Class II Aldolase and Adducin N-terminal domain
CI103_RS23235	SM00486	DNA polymerase type-B family
CI103_RS23240	SM00487	DEAD-like helicases superfamily
CI103_RS23240	SM00490	helicase superfamily c-terminal domain
CI103_RS23265	SM00091	PAS domain
CI103_RS23265	SM00387	Histidine kinase-like ATPases
CI103_RS23270	SM00448	cheY-homologous receiver domain
CI103_RS23275	SM00271	DnaJ molecular chaperone homology domain
CI103_RS23295	SM00650	Ribosomal RNA adenine dimethylases
CI103_RS23340	SM00851	MGS-like domain
CI103_RS23340	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CI103_RS23345	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CI103_RS23380	SM00764	Citrate lyase ligase C-terminal domain
CI103_RS23405	SM00387	Histidine kinase-like ATPases
CI103_RS23410	SM00448	cheY-homologous receiver domain
CI103_RS23455	SM00904	Riboflavin kinase
CI103_RS23485	SM00271	DnaJ molecular chaperone homology domain
CI103_RS23515	SM00852	Probable molybdopterin binding domain
CI103_RS23575	SM00448	cheY-homologous receiver domain
CI103_RS23575	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS23585	SM00387	Histidine kinase-like ATPases
CI103_RS23585	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS23590	SM00448	cheY-homologous receiver domain
CI103_RS23590	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS23600	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS23600	SM00871	Bacterial transcription activator, effector binding domain
CI103_RS23605	SM00855	Phosphoglycerate mutase family
CI103_RS23630	SM00382	ATPases associated with a variety of cellular activities
CI103_RS23635	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS23640	SM00382	ATPases associated with a variety of cellular activities
CI103_RS23675	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CI103_RS23680	SM01133	CI103_RS23680
CI103_RS23705	SM00749	bacterial OsmY and nodulation domain
CI103_RS23755	SM00267	diguanylate cyclase
CI103_RS23775	SM00421	helix_turn_helix, Lux Regulon
CI103_RS23780	SM00421	helix_turn_helix, Lux Regulon
CI103_RS23785	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS23815	SM00382	ATPases associated with a variety of cellular activities
CI103_RS23865	SM00382	ATPases associated with a variety of cellular activities
CI103_RS23875	SM00829	Enoylreductase
CI103_RS23880	SM00895	CI103_RS23880
CI103_RS23935	SM01119	CI103_RS23935
CI103_RS23955	SM00347	helix_turn_helix multiple antibiotic resistance protein
CI103_RS24000	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS24010	SM00903	Flavin reductase like domain
CI103_RS24035	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CI103_RS24055	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS24105	SM00347	helix_turn_helix multiple antibiotic resistance protein
CI103_RS24115	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS24145	SM00382	ATPases associated with a variety of cellular activities
CI103_RS24165	SM00382	ATPases associated with a variety of cellular activities
CI103_RS24200	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
CI103_RS24215	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CI103_RS24215	SM00387	Histidine kinase-like ATPases
CI103_RS24215	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS24220	SM00448	cheY-homologous receiver domain
CI103_RS24220	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS24260	SM00422	helix_turn_helix, mercury resistance
CI103_RS24380	SM00493	CI103_RS24380
CI103_RS24380	SM00778	Zinc-binding domain of primase-helicase
CI103_RS24380	SM00885	D5 N terminal like
CI103_RS24450	SM00947	Carbonic anhydrase
CI103_RS24460	SM00829	Enoylreductase
CI103_RS24480	SM00382	ATPases associated with a variety of cellular activities
CI103_RS24620	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS24620	SM00866	CI103_RS24620
CI103_RS24670	SM00831	Cation transporter/ATPase, N-terminus
CI103_RS24680	SM00354	helix_turn _helix lactose operon repressor
CI103_RS24690	SM00642	Alpha-amylase domain
CI103_RS24830	SM00382	ATPases associated with a variety of cellular activities
CI103_RS24875	SM01091	Transporter associated domain
CI103_RS24915	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS24975	SM01007	Class II Aldolase and Adducin N-terminal domain
CI103_RS24985	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CI103_RS25010	SM00420	helix_turn_helix, Deoxyribose operon repressor
CI103_RS25010	SM01134	CI103_RS25010
CI103_RS25035	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CI103_RS25040	SM00316	Ribosomal protein S1-like RNA-binding domain
CI103_RS25040	SM00357	Cold shock protein domain
CI103_RS25040	SM00955	CI103_RS25040
CI103_RS25050	SM00788	Adenylosuccinate synthetase
CI103_RS25065	SM00244	prohibitin homologues
CI103_RS25070	SM00244	prohibitin homologues
CI103_RS25090	SM00853	MutL C terminal dimerisation domain
CI103_RS25090	SM01340	CI103_RS25090
CI103_RS25095	SM00646	CI103_RS25095
CI103_RS25135	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS25135	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CI103_RS25140	SM00479	CI103_RS25140
CI103_RS25215	SM00841	Elongation factor P, C-terminal
CI103_RS25215	SM01185	CI103_RS25215
CI103_RS25225	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS25275	SM00382	ATPases associated with a variety of cellular activities
CI103_RS25295	SM00883	Chaperonin 10 Kd subunit
CI103_RS25360	SM00421	helix_turn_helix, Lux Regulon
CI103_RS25400	SM00271	DnaJ molecular chaperone homology domain
CI103_RS25440	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS25465	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS25465	SM00866	CI103_RS25465
CI103_RS25490	SM00382	ATPases associated with a variety of cellular activities
CI103_RS25495	SM00382	ATPases associated with a variety of cellular activities
CI103_RS25505	SM00072	Guanylate kinase homologues.
CI103_RS25520	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CI103_RS25520	SM00387	Histidine kinase-like ATPases
CI103_RS25520	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS25520	SM00448	cheY-homologous receiver domain
CI103_RS25525	SM00382	ATPases associated with a variety of cellular activities
CI103_RS25555	SM00448	cheY-homologous receiver domain
CI103_RS25555	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS25565	SM00671	Sel1-like repeats.
CI103_RS25660	SM00422	helix_turn_helix, mercury resistance
CI103_RS25665	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS25670	SM00052	Putative diguanylate phosphodiesterase
CI103_RS25700	SM00382	ATPases associated with a variety of cellular activities
CI103_RS25710	SM00354	helix_turn _helix lactose operon repressor
CI103_RS25745	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS25755	SM00062	Bacterial periplasmic substrate-binding proteins
CI103_RS25790	SM01005	Alanine racemase, C-terminal domain
CI103_RS25795	SM00382	ATPases associated with a variety of cellular activities
CI103_RS25800	SM00829	Enoylreductase
CI103_RS25845	SM00563	Phosphate acyltransferases
CI103_RS25870	SM00382	ATPases associated with a variety of cellular activities
CI103_RS25965	SM00363	S4 RNA-binding domain
CI103_RS26015	SM01018	B12 binding domain
CI103_RS26020	SM00346	helix_turn_helix isocitrate lyase regulation
CI103_RS26080	SM00798	AICARFT/IMPCHase bienzyme
CI103_RS26080	SM00851	MGS-like domain
CI103_RS26085	SM01209	CI103_RS26085
CI103_RS26085	SM01210	CI103_RS26085
CI103_RS26090	SM00382	ATPases associated with a variety of cellular activities
CI103_RS26090	SM00448	cheY-homologous receiver domain
CI103_RS26095	SM00387	Histidine kinase-like ATPases
CI103_RS26095	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS26110	SM00411	bacterial (prokaryotic) histone like domain
CI103_RS26165	SM00876	Biotin and Thiamin Synthesis associated domain
CI103_RS26175	SM00267	diguanylate cyclase
CI103_RS26195	SM00663	RNA polymerase I subunit A N-terminus
CI103_RS26225	SM00649	Ribosomal protein L11/L12
CI103_RS26230	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CI103_RS26230	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CI103_RS26355	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CI103_RS26450	SM00341	Helicase and RNase D C-terminal
CI103_RS26450	SM00487	DEAD-like helicases superfamily
CI103_RS26450	SM00490	helicase superfamily c-terminal domain
CI103_RS26450	SM00956	CI103_RS26450
CI103_RS26510	SM01219	CI103_RS26510
CI103_RS26605	SM00984	UDP binding domain
CI103_RS26625	SM00357	Cold shock protein domain
CI103_RS26625	SM00382	ATPases associated with a variety of cellular activities
CI103_RS26625	SM00959	Rho termination factor, N-terminal domain
CI103_RS26640	SM00487	DEAD-like helicases superfamily
CI103_RS26640	SM00490	helicase superfamily c-terminal domain
CI103_RS26730	SM00382	ATPases associated with a variety of cellular activities
CI103_RS26835	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CI103_RS26855	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS26920	SM00487	DEAD-like helicases superfamily
CI103_RS26920	SM00490	helicase superfamily c-terminal domain
CI103_RS26925	SM00354	helix_turn _helix lactose operon repressor
CI103_RS26940	SM00382	ATPases associated with a variety of cellular activities
CI103_RS26940	SM01086	C-terminal, D2-small domain, of ClpB protein
CI103_RS26970	SM00448	cheY-homologous receiver domain
CI103_RS26970	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS26975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CI103_RS26975	SM00387	Histidine kinase-like ATPases
CI103_RS26975	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS26995	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS27000	SM00342	helix_turn_helix, arabinose operon control protein
CI103_RS27020	SM01007	Class II Aldolase and Adducin N-terminal domain
CI103_RS27030	SM00382	ATPases associated with a variety of cellular activities
CI103_RS27065	SM00354	helix_turn _helix lactose operon repressor
CI103_RS27070	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS27135	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CI103_RS27205	SM01230	CI103_RS27205
CI103_RS27210	SM00091	PAS domain
CI103_RS27210	SM00387	Histidine kinase-like ATPases
CI103_RS27210	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS27215	SM00382	ATPases associated with a variety of cellular activities
CI103_RS27215	SM00448	cheY-homologous receiver domain
CI103_RS27225	SM00729	Elongator protein 3, MiaB family, Radical SAM
CI103_RS27245	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CI103_RS27245	SM00474	3'-5' exonuclease
CI103_RS27245	SM00475	5'-3' exonuclease
CI103_RS27245	SM00482	DNA polymerase A domain
CI103_RS27250	SM00563	Phosphate acyltransferases
CI103_RS27300	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CI103_RS27300	SM00895	CI103_RS27300
CI103_RS27310	SM00354	helix_turn _helix lactose operon repressor
CI103_RS27330	SM00382	ATPases associated with a variety of cellular activities
CI103_RS27345	SM00382	ATPases associated with a variety of cellular activities
CI103_RS27350	SM00327	von Willebrand factor (vWF) type A domain
CI103_RS27360	SM00344	helix_turn_helix ASNC type
CI103_RS27370	SM01228	CI103_RS27370
CI103_RS27415	SM00382	ATPases associated with a variety of cellular activities
CI103_RS27450	SM00382	ATPases associated with a variety of cellular activities
CI103_RS27530	SM01234	CI103_RS27530
CI103_RS27565	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CI103_RS27565	SM00267	diguanylate cyclase
CI103_RS27570	SM00052	Putative diguanylate phosphodiesterase
CI103_RS27585	SM00052	Putative diguanylate phosphodiesterase
CI103_RS27630	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CI103_RS27630	SM00387	Histidine kinase-like ATPases
CI103_RS27630	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS27635	SM00448	cheY-homologous receiver domain
CI103_RS27635	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS27665	SM00746	metallochaperone-like domain
CI103_RS27705	SM00448	cheY-homologous receiver domain
CI103_RS27705	SM00862	Transcriptional regulatory protein, C terminal
CI103_RS27710	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CI103_RS27710	SM00387	Histidine kinase-like ATPases
CI103_RS27710	SM00388	His Kinase A (phosphoacceptor) domain
CI103_RS27740	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CI103_RS27790	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CI103_RS27870	SM00382	ATPases associated with a variety of cellular activities
CI103_RS27870	SM01086	C-terminal, D2-small domain, of ClpB protein
CI103_RS27940	SM00382	ATPases associated with a variety of cellular activities
CI103_RS28065	SM00857	Resolvase, N terminal domain
CI103_RS28080	SM01059	Chloramphenicol acetyltransferase
CI103_RS28150	SM00382	ATPases associated with a variety of cellular activities
CI103_RS28175	SM01012	CI103_RS28175
CI103_RS28205	SM00965	Secretin and TonB N terminus short domain
CI103_RS28225	SM00382	ATPases associated with a variety of cellular activities
CI103_RS28240	SM00829	Enoylreductase
CI103_RS28250	SM00354	helix_turn _helix lactose operon repressor
CI103_RS28255	SM01038	Beta galactosidase small chain
CI103_RS28280	SM00487	DEAD-like helicases superfamily
CI103_RS28280	SM00490	helicase superfamily c-terminal domain
CI103_RS28315	SM00155	Phospholipase D. Active site motifs.
CI103_RS28340	SM00945	ProQ/FINO family
CI103_RS28570	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS28575	SM00530	Helix-turn-helix XRE-family like proteins 
CI103_RS28655	SM00470	ParB-like nuclease domain
CI103_RS28775	SM00470	ParB-like nuclease domain
CI103_RS28795	SM00470	ParB-like nuclease domain
CI103_RS28825	SM00487	DEAD-like helicases superfamily
CI103_RS28880	SM00966	SpoVT / AbrB like domain 
CI103_RS28915	SM00422	helix_turn_helix, mercury resistance
CI103_RS28925	SM00052	Putative diguanylate phosphodiesterase
CI103_RS28970	SM00857	Resolvase, N terminal domain
CI103_RS29010	SM00382	ATPases associated with a variety of cellular activities
CI103_RS29040	SM00945	ProQ/FINO family
CI103_RS29075	SM00155	Phospholipase D. Active site motifs.
CI103_RS29100	SM00945	ProQ/FINO family
CI103_RS29380	SM00470	ParB-like nuclease domain
CI103_RS29550	SM00857	Resolvase, N terminal domain
CI103_RS29585	SM00420	helix_turn_helix, Deoxyribose operon repressor
CI103_RS29585	SM01134	CI103_RS29585
CI103_RS29650	SM00528	Domain in histone-like proteins of HNS family
CI103_RS29655	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CI103_RS29655	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CI103_RS29655	SM00493	CI103_RS29655
CI103_RS29660	SM00382	ATPases associated with a variety of cellular activities
CI103_RS29665	SM00318	Staphylococcal nuclease homologues
CI103_RS29750	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CI103_RS29795	SM00271	DnaJ molecular chaperone homology domain
