locus-tag	class	description
CLQ68_RS00025	COG3039	Transposase
CLQ68_RS00030	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CLQ68_RS00040	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CLQ68_RS00090	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLQ68_RS00120	COG0739	heme binding
CLQ68_RS00130	COG2132	Multicopper oxidase
CLQ68_RS00135	COG3667	copper resistance
CLQ68_RS00140	COG2372	response to copper ion
CLQ68_RS00145	COG1276	copper resistance
CLQ68_RS00150	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS00155	COG2205	protein histidine kinase activity
CLQ68_RS00175	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CLQ68_RS00190	COG0431	NADPH-dependent FMN reductase
CLQ68_RS00220	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CLQ68_RS00300	COG2801	Transposase and inactivated derivatives
CLQ68_RS00310	COG2801	Transposase and inactivated derivatives
CLQ68_RS00320	COG2801	Transposase and inactivated derivatives
CLQ68_RS00370	COG0789	Transcriptional regulator
CLQ68_RS00400	COG3429	Glucose-6-phosphate dehydrogenase subunit
CLQ68_RS00400	COG3409	Peptidoglycan-binding domain 1 protein
CLQ68_RS00410	COG3436	PFAM IS66 Orf2 family protein
CLQ68_RS00425	COG4172	Belongs to the ABC transporter superfamily
CLQ68_RS00440	COG0601	transmembrane transport
CLQ68_RS00445	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLQ68_RS00475	COG1595	DNA-templated transcription, initiation
CLQ68_RS00480	COG3712	iron ion homeostasis
CLQ68_RS00485	COG4772	TonB-dependent receptor
CLQ68_RS00490	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CLQ68_RS00495	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS00500	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS00505	COG1120	ATPase activity
CLQ68_RS00510	COG3436	PFAM IS66 Orf2 family protein
CLQ68_RS00540	COG1609	Transcriptional regulator
CLQ68_RS00550	COG2223	nitrite transmembrane transporter activity
CLQ68_RS00850	COG5499	transcription regulator containing HTH domain
CLQ68_RS00930	COG1475	DNA binding
CLQ68_RS01005	COG3344	reverse transcriptase
CLQ68_RS01125	COG1349	DNA-binding transcription factor activity
CLQ68_RS01170	COG1192	Involved in chromosome partitioning
CLQ68_RS01210	COG0484	heat shock protein binding
CLQ68_RS01315	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
CLQ68_RS01345	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CLQ68_RS01350	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CLQ68_RS01410	COG3039	Transposase
CLQ68_RS01440	COG0673	inositol 2-dehydrogenase activity
CLQ68_RS01445	COG1324	tolerance protein
CLQ68_RS01470	COG0187	DNA topoisomerase II activity
CLQ68_RS01475	COG0561	phosphatase activity
CLQ68_RS01490	COG2186	Transcriptional regulator
CLQ68_RS01495	COG3734	2-keto-3-deoxy-galactonokinase
CLQ68_RS01500	COG0800	Aldolase
CLQ68_RS01510	COG2271	Major facilitator Superfamily
CLQ68_RS01515	COG0823	Involved in the tonB-independent uptake of proteins
CLQ68_RS01520	COG5645	(Lipo)protein
CLQ68_RS01545	COG2188	Transcriptional regulator
CLQ68_RS01560	COG2149	membrane
CLQ68_RS01580	COG2610	gluconate transmembrane transporter activity
CLQ68_RS01585	COG0583	DNA-binding transcription factor activity
CLQ68_RS01590	COG2814	Major facilitator Superfamily
CLQ68_RS01615	COG0028	Belongs to the TPP enzyme family
CLQ68_RS01620	COG0440	acetolactate synthase activity
CLQ68_RS01625	COG2197	response regulator
CLQ68_RS01635	COG2271	Major facilitator Superfamily
CLQ68_RS01680	COG2188	Transcriptional regulator
CLQ68_RS01705	COG4580	involved in the transport of maltose and maltodextrins
CLQ68_RS01710	COG1447	Phosphotransferase system cellobiose-specific component IIA
CLQ68_RS01715	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS01715	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS01725	COG1609	Transcriptional regulator
CLQ68_RS01735	COG3384	dioxygenase
CLQ68_RS01740	COG0583	DNA-binding transcription factor activity
CLQ68_RS01745	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CLQ68_RS01750	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CLQ68_RS01755	COG2828	Protein conserved in bacteria
CLQ68_RS01770	COG0697	spore germination
CLQ68_RS01775	COG1263	PTS System
CLQ68_RS01775	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CLQ68_RS01785	COG2814	Major facilitator Superfamily
CLQ68_RS01795	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLQ68_RS01830	COG0583	DNA-binding transcription factor activity
CLQ68_RS01855	COG1464	Belongs to the NlpA lipoprotein family
CLQ68_RS01870	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
CLQ68_RS01880	COG1064	alcohol dehydrogenase
CLQ68_RS01910	COG2211	Major facilitator Superfamily
CLQ68_RS01915	COG1501	Belongs to the glycosyl hydrolase 31 family
CLQ68_RS01925	COG1486	melibiose metabolic process
CLQ68_RS01930	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CLQ68_RS01930	COG1263	PTS System
CLQ68_RS01935	COG2982	Protein involved in outer membrane biogenesis
CLQ68_RS01940	COG2233	PERMEase
CLQ68_RS01945	COG0786	glutamate:sodium symporter activity
CLQ68_RS01965	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CLQ68_RS01990	COG3152	Membrane
CLQ68_RS02000	COG1494	fructose-1,6-bisphosphatase
CLQ68_RS02005	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CLQ68_RS02010	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CLQ68_RS02015	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CLQ68_RS02035	COG2860	membrane
CLQ68_RS02045	COG2169	Transcriptional regulator
CLQ68_RS02045	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CLQ68_RS02055	COG1561	YicC-like family, N-terminal region
CLQ68_RS02070	COG1131	(ABC) transporter
CLQ68_RS02075	COG0842	Transport permease protein
CLQ68_RS02100	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CLQ68_RS02135	COG1519	Transferase
CLQ68_RS02140	COG1216	Glycosyl transferase, family 2
CLQ68_RS02145	COG0438	transferase activity, transferring glycosyl groups
CLQ68_RS02155	COG0859	PFAM glycosyl transferase family 9
CLQ68_RS02165	COG1216	Glycosyl transferase, family 2
CLQ68_RS02165	COG1442	glycosyl transferase family 8
CLQ68_RS02170	COG3307	-O-antigen
CLQ68_RS02175	COG0438	transferase activity, transferring glycosyl groups
CLQ68_RS02180	COG0859	PFAM glycosyl transferase family 9
CLQ68_RS02195	COG0156	8-amino-7-oxononanoate synthase activity
CLQ68_RS02205	COG0463	Glycosyl transferase, family 2
CLQ68_RS02210	COG2861	carbohydrate metabolic process
CLQ68_RS02215	COG4942	peptidase
CLQ68_RS02225	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CLQ68_RS02230	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CLQ68_RS02250	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CLQ68_RS02260	COG2186	Transcriptional regulator
CLQ68_RS02280	COG3722	fumarate hydratase activity
CLQ68_RS02300	COG1566	PFAM secretion protein HlyD family protein
CLQ68_RS02305	COG0625	glutathione transferase activity
CLQ68_RS02315	COG3276	selenocysteine insertion sequence binding
CLQ68_RS02320	COG1414	Transcriptional regulator
CLQ68_RS02325	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CLQ68_RS02330	COG3977	Valine--pyruvate aminotransferase
CLQ68_RS02335	COG0366	Alpha amylase catalytic
CLQ68_RS02345	COG2992	FlgJ-related protein
CLQ68_RS02350	COG1609	Transcriptional regulator
CLQ68_RS02350	COG2207	Transcriptional regulator
CLQ68_RS02355	COG4214	carbohydrate transport
CLQ68_RS02365	COG4213	ABC transporter substrate-binding protein
CLQ68_RS02385	COG4682	membrane
CLQ68_RS02390	COG4682	membrane
CLQ68_RS02395	COG3274	enterobacterial common antigen metabolic process
CLQ68_RS02430	COG1278	Cold shock
CLQ68_RS02435	COG2944	sequence-specific DNA binding
CLQ68_RS02440	COG2814	Major facilitator Superfamily
CLQ68_RS02465	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CLQ68_RS02475	COG1609	Transcriptional regulator
CLQ68_RS02480	COG2885	chlorophyll binding
CLQ68_RS02485	COG0243	molybdopterin cofactor binding
CLQ68_RS02490	COG0456	acetyltransferase
CLQ68_RS02495	COG2818	Glycosylase
CLQ68_RS02500	COG5571	outer membrane autotransporter
CLQ68_RS02505	COG2223	nitrite transmembrane transporter activity
CLQ68_RS02540	COG0747	negative chemotaxis
CLQ68_RS02545	COG0601	transmembrane transport
CLQ68_RS02550	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLQ68_RS02555	COG0444	Belongs to the ABC transporter superfamily
CLQ68_RS02560	COG4608	Belongs to the ABC transporter superfamily
CLQ68_RS02575	COG2894	cell division
CLQ68_RS02585	COG1215	transferase activity, transferring glycosyl groups
CLQ68_RS02590	COG0457	Tetratricopeptide repeat
CLQ68_RS02605	COG2194	sulfuric ester hydrolase activity
CLQ68_RS02635	COG1215	transferase activity, transferring glycosyl groups
CLQ68_RS02640	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CLQ68_RS02645	COG3118	belongs to the thioredoxin family
CLQ68_RS02645	COG0457	Tetratricopeptide repeat
CLQ68_RS02650	COG2200	EAL domain
CLQ68_RS02650	COG2199	diguanylate cyclase activity
CLQ68_RS02665	COG0612	Peptidase, M16
CLQ68_RS02680	COG2982	Protein involved in outer membrane biogenesis
CLQ68_RS02685	COG0477	Major facilitator Superfamily
CLQ68_RS02695	COG1295	ribonuclease BN
CLQ68_RS02700	COG0583	DNA-binding transcription factor activity
CLQ68_RS02705	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS02710	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CLQ68_RS02720	COG1454	alcohol dehydrogenase
CLQ68_RS02730	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CLQ68_RS02735	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CLQ68_RS02740	COG0671	phosphoesterase, PA-phosphatase related
CLQ68_RS02760	COG0589	response to stress
CLQ68_RS02770	COG0306	phosphate transporter
CLQ68_RS02775	COG2081	HI0933 family
CLQ68_RS02780	COG2239	Acts as a magnesium transporter
CLQ68_RS02790	COG1124	(ABC) transporter
CLQ68_RS02800	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLQ68_RS02805	COG0601	transmembrane transport
CLQ68_RS02810	COG0747	negative chemotaxis
CLQ68_RS02825	COG3479	Phenolic acid decarboxylase
CLQ68_RS02865	COG0628	permease
CLQ68_RS02870	COG0477	Major facilitator Superfamily
CLQ68_RS02880	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CLQ68_RS02895	COG3714	YhhN family
CLQ68_RS02905	COG3776	membrane
CLQ68_RS02910	COG0742	ribosomal rna small subunit methyltransferase
CLQ68_RS02915	COG0552	protein localization to endoplasmic reticulum
CLQ68_RS02920	COG2884	Cell division ATP-binding protein ftsE
CLQ68_RS02925	COG2177	Part of the ABC transporter FtsEX involved in
CLQ68_RS02940	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CLQ68_RS02950	COG0683	leucine binding
CLQ68_RS02965	COG0683	leucine binding
CLQ68_RS02970	COG0559	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS03020	COG0584	glycerophosphoryl diester phosphodiesterase
CLQ68_RS03030	COG0405	Gamma-glutamyltransferase
CLQ68_RS03035	COG1247	-acetyltransferase
CLQ68_RS03045	COG0673	inositol 2-dehydrogenase activity
CLQ68_RS03050	COG1741	Belongs to the pirin family
CLQ68_RS03055	COG1609	Transcriptional regulator
CLQ68_RS03060	COG3265	gluconokinase activity
CLQ68_RS03065	COG2610	gluconate transmembrane transporter activity
CLQ68_RS03075	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CLQ68_RS03100	COG0058	SHG alpha-glucan phosphorylase activity
CLQ68_RS03105	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CLQ68_RS03120	COG1349	DNA-binding transcription factor activity
CLQ68_RS03135	COG0058	SHG alpha-glucan phosphorylase activity
CLQ68_RS03140	COG1640	4-alpha-glucanotransferase
CLQ68_RS03145	COG2610	gluconate transmembrane transporter activity
CLQ68_RS03155	COG1040	competence protein
CLQ68_RS03180	COG1918	ferrous iron import across plasma membrane
CLQ68_RS03185	COG2183	response to ionizing radiation
CLQ68_RS03190	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CLQ68_RS03215	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CLQ68_RS03220	COG1011	Hydrolase
CLQ68_RS03230	COG0494	nUDIX hydrolase
CLQ68_RS03235	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CLQ68_RS03260	COG4796	Type ii and iii secretion system protein
CLQ68_RS03280	COG3266	domain, Protein
CLQ68_RS03285	COG0338	D12 class N6 adenine-specific DNA methyltransferase
CLQ68_RS03290	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CLQ68_RS03315	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CLQ68_RS03320	COG0402	S-adenosylhomocysteine deaminase activity
CLQ68_RS03325	COG0738	Major facilitator superfamily
CLQ68_RS03350	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CLQ68_RS03355	COG1289	transmembrane transporter activity
CLQ68_RS03370	COG1765	OsmC-like protein
CLQ68_RS03375	COG3954	Phosphoribulokinase
CLQ68_RS03385	COG0429	hydrolase of the alpha beta-hydrolase fold
CLQ68_RS03395	COG0488	(ABC) transporter
CLQ68_RS03415	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
CLQ68_RS03420	COG1047	Peptidyl-prolyl cis-trans
CLQ68_RS03430	COG0545	Peptidyl-prolyl cis-trans isomerase
CLQ68_RS03435	COG2964	Protein conserved in bacteria
CLQ68_RS03495	COG0051	transcription antitermination factor activity, RNA binding
CLQ68_RS03520	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CLQ68_RS03535	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CLQ68_RS03600	COG0201	protein transport
CLQ68_RS03615	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CLQ68_RS03625	COG0202	RNA polymerase activity
CLQ68_RS03640	COG0789	Transcriptional regulator
CLQ68_RS03645	COG3036	rescue of stalled ribosome
CLQ68_RS03675	COG0758	DNA mediated transformation
CLQ68_RS03685	COG0551	DNA topoisomerase type I activity
CLQ68_RS03705	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CLQ68_RS03740	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLQ68_RS03745	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLQ68_RS03750	COG1309	transcriptional regulator
CLQ68_RS03775	COG4145	pantothenate transmembrane transporter activity
CLQ68_RS03780	COG3924	membrane
CLQ68_RS03785	COG0439	Biotin carboxylase
CLQ68_RS03790	COG0511	ligase activity, forming carbon-carbon bonds
CLQ68_RS03820	COG2200	EAL domain
CLQ68_RS03820	COG2199	diguanylate cyclase activity
CLQ68_RS03830	COG1077	Cell shape determining protein MreB Mrl
CLQ68_RS03835	COG1792	Involved in formation and maintenance of cell shape
CLQ68_RS03840	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
CLQ68_RS03850	COG1530	ribonuclease E activity
CLQ68_RS03855	COG3164	Protein of unknown function
CLQ68_RS03860	COG0312	modulator of DNA gyrase
CLQ68_RS03865	COG0583	DNA-binding transcription factor activity
CLQ68_RS03880	COG1289	transmembrane transporter activity
CLQ68_RS03885	COG2732	(Barnase) inhibitor
CLQ68_RS03910	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CLQ68_RS03915	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CLQ68_RS03920	COG3105	Protein conserved in bacteria
CLQ68_RS03925	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CLQ68_RS03945	COG0625	glutathione transferase activity
CLQ68_RS03950	COG2969	positive regulation of protein catabolic process
CLQ68_RS03960	COG0493	'glutamate synthase
CLQ68_RS03965	COG0070	glutamate synthase
CLQ68_RS03965	COG0069	glutamate synthase activity
CLQ68_RS03965	COG0067	glutamate synthase
CLQ68_RS03975	COG1242	4 iron, 4 sulfur cluster binding
CLQ68_RS03980	COG2271	Major facilitator Superfamily
CLQ68_RS03985	COG1063	alcohol dehydrogenase
CLQ68_RS03990	COG1312	Catalyzes the dehydration of D-mannonate
CLQ68_RS03995	COG2198	Histidine kinase
CLQ68_RS03995	COG5002	protein histidine kinase activity
CLQ68_RS03995	COG0784	Response regulator, receiver
CLQ68_RS04000	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
CLQ68_RS04005	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CLQ68_RS04010	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS04020	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS04025	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CLQ68_RS04030	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CLQ68_RS04035	COG1137	ATPase activity
CLQ68_RS04040	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
CLQ68_RS04045	COG3117	lipopolysaccharide transmembrane transporter activity
CLQ68_RS04050	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CLQ68_RS04060	COG0530	calcium, potassium:sodium antiporter activity
CLQ68_RS04070	COG1127	ABC transporter
CLQ68_RS04075	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CLQ68_RS04080	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CLQ68_RS04085	COG2854	intermembrane phospholipid transfer
CLQ68_RS04090	COG3113	response to antibiotic
CLQ68_RS04095	COG5007	Belongs to the BolA IbaG family
CLQ68_RS04105	COG3423	Transcriptional regulator
CLQ68_RS04110	COG0142	geranyltranstransferase activity
CLQ68_RS04125	COG0697	spore germination
CLQ68_RS04135	COG2027	D-alanyl-D-alanine carboxypeptidase
CLQ68_RS04145	COG1534	Rna-binding protein
CLQ68_RS04155	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CLQ68_RS04160	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CLQ68_RS04170	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CLQ68_RS04210	COG0195	Participates in both transcription termination and antitermination
CLQ68_RS04260	COG0814	amino acid
CLQ68_RS04285	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
CLQ68_RS04330	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CLQ68_RS04335	COG0826	peptidase U32
CLQ68_RS04340	COG0826	peptidase U32
CLQ68_RS04345	COG3154	lipid carrier protein
CLQ68_RS04350	COG3153	acetyltransferase
CLQ68_RS04365	COG0693	protein deglycase activity
CLQ68_RS04370	COG0702	epimerase
CLQ68_RS04375	COG0701	Predicted permease
CLQ68_RS04380	COG2823	Periplasmic or secreted lipoprotein
CLQ68_RS04400	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CLQ68_RS04405	COG2721	sulfolactate sulfo-lyase activity
CLQ68_RS04410	COG2271	Major facilitator Superfamily
CLQ68_RS04420	COG2084	Dehydrogenase
CLQ68_RS04425	COG1929	Belongs to the glycerate kinase type-1 family
CLQ68_RS04445	COG1741	Belongs to the pirin family
CLQ68_RS04450	COG0583	DNA-binding transcription factor activity
CLQ68_RS04455	COG3152	Membrane
CLQ68_RS04460	COG0435	Glutathione S-transferase
CLQ68_RS04465	COG2259	Doxx family
CLQ68_RS04475	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
CLQ68_RS04480	COG4575	ribosome binding
CLQ68_RS04485	COG1422	Protein of unknown function (DUF1090)
CLQ68_RS04495	COG0586	Pfam SNARE associated Golgi protein
CLQ68_RS04505	COG2186	Transcriptional regulator
CLQ68_RS04510	COG2271	Major facilitator Superfamily
CLQ68_RS04520	COG2721	sulfolactate sulfo-lyase activity
CLQ68_RS04535	COG0861	Integral membrane protein TerC family
CLQ68_RS04540	COG0673	inositol 2-dehydrogenase activity
CLQ68_RS04545	COG1451	nucleotide metabolic process
CLQ68_RS04565	COG1902	pentaerythritol trinitrate reductase activity
CLQ68_RS04565	COG0446	pyridine nucleotide-disulphide oxidoreductase
CLQ68_RS04620	COG1695	Transcriptional regulator
CLQ68_RS04625	COG2375	cellular response to nickel ion
CLQ68_RS04640	COG1461	Dihydroxyacetone kinase
CLQ68_RS04645	COG2376	Dihydroxyacetone kinase
CLQ68_RS04720	COG3247	response to pH
CLQ68_RS04730	COG2198	Histidine kinase
CLQ68_RS04730	COG0784	Response regulator, receiver
CLQ68_RS04730	COG2205	protein histidine kinase activity
CLQ68_RS04730	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLQ68_RS04735	COG2197	response regulator
CLQ68_RS04775	COG4983	Phage plasmid primase, P4 family domain protein
CLQ68_RS04825	COG0210	DNA helicase
CLQ68_RS04845	COG3596	GTP binding
CLQ68_RS04855	COG2378	regulation of single-species biofilm formation
CLQ68_RS04860	COG3468	outer membrane autotransporter barrel domain protein
CLQ68_RS04875	COG2003	Belongs to the UPF0758 family
CLQ68_RS04910	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CLQ68_RS04915	COG0358	DNA primase activity
CLQ68_RS04920	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CLQ68_RS04985	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CLQ68_RS05000	COG4991	sh3 domain protein
CLQ68_RS05005	COG3025	triphosphatase activity
CLQ68_RS05025	COG2960	long-chain fatty acid transporting porin activity
CLQ68_RS05040	COG3384	dioxygenase
CLQ68_RS05045	COG0754	glutathionylspermidine amidase activity
CLQ68_RS05060	COG0494	nUDIX hydrolase
CLQ68_RS05065	COG3151	Protein conserved in bacteria
CLQ68_RS05070	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CLQ68_RS05075	COG3150	esterase
CLQ68_RS05085	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
CLQ68_RS05090	COG2249	NAD(P)H dehydrogenase (quinone) activity
CLQ68_RS05095	COG0642	Histidine kinase
CLQ68_RS05105	COG3111	PFAM Bacterial OB fold (BOF) protein
CLQ68_RS05110	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
CLQ68_RS05115	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CLQ68_RS05120	COG0204	Acyl-transferase
CLQ68_RS05125	COG2132	Multicopper oxidase
CLQ68_RS05130	COG1032	radical SAM domain protein
CLQ68_RS05140	COG0656	L-ascorbic acid biosynthetic process
CLQ68_RS05145	COG1979	alcohol dehydrogenase
CLQ68_RS05150	COG2207	Transcriptional regulator
CLQ68_RS05155	COG0586	Pfam SNARE associated Golgi protein
CLQ68_RS05160	COG0626	cystathionine gamma-synthase activity
CLQ68_RS05175	COG0848	biopolymer transport protein
CLQ68_RS05195	COG0625	glutathione transferase activity
CLQ68_RS05205	COG0754	glutathionylspermidine amidase activity
CLQ68_RS05210	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CLQ68_RS05230	COG0583	DNA-binding transcription factor activity
CLQ68_RS05235	COG0626	cystathionine gamma-synthase activity
CLQ68_RS05275	COG1811	Na channel or pump
CLQ68_RS05285	COG1982	Orn Lys Arg decarboxylase major
CLQ68_RS05290	COG2211	Major facilitator Superfamily
CLQ68_RS05305	COG1194	a g-specific adenine glycosylase
CLQ68_RS05315	COG3171	Protein conserved in bacteria
CLQ68_RS05325	COG4214	carbohydrate transport
CLQ68_RS05340	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CLQ68_RS05355	COG0762	integral membrane protein
CLQ68_RS05360	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CLQ68_RS05365	COG2805	Type II/IV secretion system protein
CLQ68_RS05385	COG0189	ligase activity
CLQ68_RS05390	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CLQ68_RS05395	COG2356	endonuclease I
CLQ68_RS05405	COG2814	Major facilitator Superfamily
CLQ68_RS05445	COG2146	nitrite reductase [NAD(P)H] activity
CLQ68_RS05460	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS05465	COG1414	Transcriptional regulator
CLQ68_RS05495	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS05500	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
CLQ68_RS05520	COG0501	Belongs to the peptidase M48B family
CLQ68_RS05525	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CLQ68_RS05540	COG0191	fructose-bisphosphate aldolase activity
CLQ68_RS05545	COG0668	transmembrane transport
CLQ68_RS05555	COG2968	Membrane
CLQ68_RS05570	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CLQ68_RS05575	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CLQ68_RS05595	COG0006	proline dipeptidase activity
CLQ68_RS05600	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CLQ68_RS05605	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CLQ68_RS05625	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS05630	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CLQ68_RS05650	COG2723	6-phospho-beta-galactosidase activity
CLQ68_RS05655	COG1737	Transcriptional regulator
CLQ68_RS05665	COG1272	protein, Hemolysin III
CLQ68_RS05675	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
CLQ68_RS05685	COG0716	FMN binding
CLQ68_RS05690	COG4974	Belongs to the 'phage' integrase family
CLQ68_RS05700	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CLQ68_RS05725	COG4942	peptidase
CLQ68_RS05735	COG2814	Major facilitator Superfamily
CLQ68_RS05750	COG0667	Aldo Keto reductase
CLQ68_RS05755	COG2249	NAD(P)H dehydrogenase (quinone) activity
CLQ68_RS05795	COG1393	Belongs to the ArsC family
CLQ68_RS05810	COG1538	Outer membrane efflux protein
CLQ68_RS05815	COG1289	transmembrane transporter activity
CLQ68_RS05830	COG3592	Divergent 4Fe-4S mono-cluster
CLQ68_RS05835	COG2388	GCN5-related N-acetyl-transferase
CLQ68_RS05845	COG3539	Fimbrial protein
CLQ68_RS05850	COG3539	Fimbrial protein
CLQ68_RS05855	COG3539	Fimbrial protein
CLQ68_RS05860	COG3188	usher protein
CLQ68_RS05865	COG3121	Chaperone
CLQ68_RS05870	COG3539	Fimbrial protein
CLQ68_RS05880	COG4974	Belongs to the 'phage' integrase family
CLQ68_RS05885	COG0582	viral genome integration into host DNA
CLQ68_RS05895	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
CLQ68_RS05900	COG1846	Transcriptional regulator
CLQ68_RS05905	COG0697	spore germination
CLQ68_RS05955	COG0667	Aldo Keto reductase
CLQ68_RS05960	COG0814	amino acid
CLQ68_RS05975	COG0183	Belongs to the thiolase family
CLQ68_RS05985	COG0823	Involved in the tonB-independent uptake of proteins
CLQ68_RS05990	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS05995	COG2814	Major facilitator Superfamily
CLQ68_RS06025	COG3842	ATPase activity
CLQ68_RS06030	COG0395	ABC-type sugar transport system, permease component
CLQ68_RS06035	COG1175	transmembrane transport
CLQ68_RS06040	COG1917	Cupin 2, conserved barrel domain protein
CLQ68_RS06045	COG1794	racemase activity, acting on amino acids and derivatives
CLQ68_RS06050	COG0583	DNA-binding transcription factor activity
CLQ68_RS06060	COG1609	Transcriptional regulator
CLQ68_RS06065	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS06070	COG2723	6-phospho-beta-galactosidase activity
CLQ68_RS06075	COG2186	Transcriptional regulator
CLQ68_RS06085	COG1609	Transcriptional regulator
CLQ68_RS06110	COG0667	Aldo Keto reductase
CLQ68_RS06120	COG0861	Integral membrane protein TerC family
CLQ68_RS06155	COG4795	General secretion pathway protein
CLQ68_RS06165	COG4967	type IV pilus modification protein PilV
CLQ68_RS06170	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
CLQ68_RS06175	COG1025	Belongs to the peptidase M16 family
CLQ68_RS06180	COG1074	ATP-dependent DNA helicase activity
CLQ68_RS06185	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CLQ68_RS06195	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CLQ68_RS06195	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CLQ68_RS06200	COG0860	N-Acetylmuramoyl-L-alanine amidase
CLQ68_RS06205	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CLQ68_RS06235	COG4656	Part of a membrane complex involved in electron transport
CLQ68_RS06240	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS06240	COG1454	alcohol dehydrogenase
CLQ68_RS06270	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
CLQ68_RS06435	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
CLQ68_RS06440	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CLQ68_RS06445	COG2166	iron-sulfur cluster assembly
CLQ68_RS06450	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CLQ68_RS06460	COG0583	DNA-binding transcription factor activity
CLQ68_RS06465	COG2363	Small membrane protein
CLQ68_RS06475	COG1349	DNA-binding transcription factor activity
CLQ68_RS06495	COG0738	Major facilitator superfamily
CLQ68_RS06500	COG0235	Class ii aldolase
CLQ68_RS06505	COG1454	alcohol dehydrogenase
CLQ68_RS06520	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CLQ68_RS06535	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CLQ68_RS06540	COG2011	ABC-type metal ion transport system permease component
CLQ68_RS06545	COG1464	Belongs to the NlpA lipoprotein family
CLQ68_RS06555	COG0477	Major facilitator Superfamily
CLQ68_RS06565	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CLQ68_RS06570	COG1760	l-serine dehydratase
CLQ68_RS06575	COG0814	amino acid
CLQ68_RS06580	COG1611	Belongs to the LOG family
CLQ68_RS06595	COG3098	single-species biofilm formation
CLQ68_RS06600	COG0564	pseudouridine synthase activity
CLQ68_RS06605	COG0716	FMN binding
CLQ68_RS06610	COG2271	Major facilitator Superfamily
CLQ68_RS06615	COG4948	Mandelate Racemase Muconate Lactonizing
CLQ68_RS06620	COG4948	Mandelate Racemase Muconate Lactonizing
CLQ68_RS06625	COG1929	Belongs to the glycerate kinase type-1 family
CLQ68_RS06630	COG2205	protein histidine kinase activity
CLQ68_RS06630	COG4999	Histidine kinase
CLQ68_RS06630	COG3437	response regulator, receiver
CLQ68_RS06630	COG3850	Histidine kinase
CLQ68_RS06640	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CLQ68_RS06645	COG3956	TIGRFAM MazG family protein
CLQ68_RS06665	COG0602	queuosine metabolic process
CLQ68_RS06670	COG0720	synthase
CLQ68_RS06690	COG2234	aminopeptidase activity
CLQ68_RS06750	COG1388	LysM domain
CLQ68_RS06750	COG4942	peptidase
CLQ68_RS06755	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CLQ68_RS06780	COG0163	prenyltransferase activity
CLQ68_RS06785	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CLQ68_RS06840	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS06845	COG4558	Periplasmic binding protein
CLQ68_RS06850	COG3720	iron ion transport
CLQ68_RS06870	COG0679	Auxin Efflux Carrier
CLQ68_RS06885	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CLQ68_RS06890	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CLQ68_RS06895	COG1121	(ABC) transporter
CLQ68_RS06905	COG1609	Transcriptional regulator
CLQ68_RS06910	COG1940	carbohydrate kinase activity
CLQ68_RS06915	COG1447	Phosphotransferase system cellobiose-specific component IIA
CLQ68_RS06920	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS06925	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS06930	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS06940	COG4580	involved in the transport of maltose and maltodextrins
CLQ68_RS06950	COG2723	6-phospho-beta-galactosidase activity
CLQ68_RS06960	COG0309	Hydrogenase expression formation protein (HypE)
CLQ68_RS06965	COG0409	Hydrogenase expression formation protein
CLQ68_RS06970	COG0298	carbon dioxide binding
CLQ68_RS06975	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
CLQ68_RS06995	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CLQ68_RS07000	COG0651	ATP synthesis coupled electron transport
CLQ68_RS07005	COG0650	Formate hydrogenlyase subunit 4
CLQ68_RS07010	COG3261	NADH dehydrogenase
CLQ68_RS07010	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
CLQ68_RS07015	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLQ68_RS07020	COG3260	NADH ubiquinone oxidoreductase 20
CLQ68_RS07030	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
CLQ68_RS07040	COG2723	6-phospho-beta-galactosidase activity
CLQ68_RS07045	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CLQ68_RS07045	COG1263	PTS System
CLQ68_RS07050	COG1609	Transcriptional regulator
CLQ68_RS07055	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CLQ68_RS07060	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
CLQ68_RS07065	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
CLQ68_RS07095	COG1349	DNA-binding transcription factor activity
CLQ68_RS07100	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS07105	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS07115	COG3732	PTS system glucitol sorbitol-specific
CLQ68_RS07120	COG3730	PTS system glucitol sorbitol-specific
CLQ68_RS07125	COG2951	lytic endotransglycosylase activity
CLQ68_RS07135	COG1121	(ABC) transporter
CLQ68_RS07140	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CLQ68_RS07150	COG1546	Belongs to the CinA family
CLQ68_RS07175	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
CLQ68_RS07205	COG2823	Periplasmic or secreted lipoprotein
CLQ68_RS07210	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CLQ68_RS07215	COG1238	metal cluster binding
CLQ68_RS07235	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CLQ68_RS07240	COG2814	Major facilitator Superfamily
CLQ68_RS07245	COG1566	PFAM secretion protein HlyD family protein
CLQ68_RS07250	COG1846	Transcriptional regulator
CLQ68_RS07260	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
CLQ68_RS07270	COG4176	ABC-type proline glycine betaine transport system permease component
CLQ68_RS07285	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CLQ68_RS07295	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CLQ68_RS07300	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CLQ68_RS07305	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CLQ68_RS07310	COG4575	ribosome binding
CLQ68_RS07335	COG2916	Histone family protein nucleoid-structuring protein H-NS
CLQ68_RS07350	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CLQ68_RS07355	COG0640	Transcriptional regulator
CLQ68_RS07365	COG0583	DNA-binding transcription factor activity
CLQ68_RS07370	COG3284	Transcriptional regulator
CLQ68_RS07380	COG3539	Fimbrial protein
CLQ68_RS07385	COG3121	Chaperone
CLQ68_RS07400	COG3121	Chaperone
CLQ68_RS07420	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS07430	COG0235	Class ii aldolase
CLQ68_RS07440	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLQ68_RS07475	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLQ68_RS07480	COG2207	Transcriptional regulator
CLQ68_RS07480	COG3708	Transcriptional regulator
CLQ68_RS07555	COG0582	viral genome integration into host DNA
CLQ68_RS07570	COG2867	negative regulation of translational initiation
CLQ68_RS07585	COG0497	DNA recombination
CLQ68_RS07605	COG4536	flavin adenine dinucleotide binding
CLQ68_RS07610	COG4137	Cytochrome C assembly protein
CLQ68_RS07615	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CLQ68_RS07650	COG2885	chlorophyll binding
CLQ68_RS07655	COG2199	diguanylate cyclase activity
CLQ68_RS07665	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CLQ68_RS07670	COG0287	Prephenate dehydrogenase
CLQ68_RS07670	COG1605	Chorismate mutase
CLQ68_RS07680	COG1605	Chorismate mutase
CLQ68_RS07680	COG0077	Prephenate dehydratase
CLQ68_RS07690	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CLQ68_RS07695	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CLQ68_RS07710	COG0542	response to heat
CLQ68_RS07735	COG0477	Major facilitator Superfamily
CLQ68_RS07740	COG5544	Lipoprotein
CLQ68_RS07745	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CLQ68_RS07755	COG3148	PFAM DTW domain containing protein
CLQ68_RS07760	COG3118	belongs to the thioredoxin family
CLQ68_RS07765	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CLQ68_RS07780	COG0513	Belongs to the DEAD box helicase family
CLQ68_RS07790	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CLQ68_RS07800	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
CLQ68_RS07805	COG3026	antisigma factor binding
CLQ68_RS07810	COG3086	response to oxidative stress
CLQ68_RS07820	COG0681	Belongs to the peptidase S26 family
CLQ68_RS07840	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CLQ68_RS07850	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CLQ68_RS07855	COG1737	Transcriptional regulator
CLQ68_RS07860	COG0560	Phosphoserine phosphatase
CLQ68_RS07875	COG0047	phosphoribosylformylglycinamidine synthase activity
CLQ68_RS07875	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CLQ68_RS07880	COG2205	protein histidine kinase activity
CLQ68_RS07885	COG3170	Tfp pilus assembly protein FimV
CLQ68_RS07890	COG2204	response regulator
CLQ68_RS07895	COG0347	Belongs to the P(II) protein family
CLQ68_RS07900	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CLQ68_RS07900	COG1017	nitric oxide dioxygenase activity
CLQ68_RS07915	COG2259	Doxx family
CLQ68_RS07920	COG1940	carbohydrate kinase activity
CLQ68_RS07925	COG0457	Tetratricopeptide repeat
CLQ68_RS07930	COG2814	Major facilitator Superfamily
CLQ68_RS07930	COG0477	Major facilitator Superfamily
CLQ68_RS07935	COG2017	converts alpha-aldose to the beta-anomer
CLQ68_RS07940	COG2814	Major facilitator Superfamily
CLQ68_RS07945	COG3711	transcriptional antiterminator
CLQ68_RS07950	COG3683	transport system, periplasmic component
CLQ68_RS07955	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
CLQ68_RS07985	COG0822	iron-sulfur transferase activity
CLQ68_RS08005	COG0633	Ferredoxin
CLQ68_RS08010	COG2975	iron-sulfur cluster assembly
CLQ68_RS08030	COG2897	thiosulfate sulfurtransferase activity
CLQ68_RS08035	COG2373	Large extracellular alpha-helical protein
CLQ68_RS08040	COG4953	penicillin-binding protein 1C
CLQ68_RS08075	COG2976	Protein conserved in bacteria
CLQ68_RS08095	COG1645	bacterial-type flagellum-dependent swarming motility
CLQ68_RS08105	COG0516	GMP reductase activity
CLQ68_RS08105	COG0517	IMP dehydrogenase activity
CLQ68_RS08150	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CLQ68_RS08245	COG5484	DNA packaging
CLQ68_RS08245	COG3728	DNA packaging
CLQ68_RS08395	COG3179	chitinase
CLQ68_RS08405	COG3119	arylsulfatase activity
CLQ68_RS08410	COG0641	radical SAM
CLQ68_RS08445	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CLQ68_RS08460	COG2723	6-phospho-beta-galactosidase activity
CLQ68_RS08470	COG2233	PERMEase
CLQ68_RS08485	COG1393	Belongs to the ArsC family
CLQ68_RS08490	COG4783	chaperone-mediated protein folding
CLQ68_RS08495	COG0628	permease
CLQ68_RS08500	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CLQ68_RS08505	COG2716	regulation of RNA biosynthetic process
CLQ68_RS08515	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
CLQ68_RS08525	COG2321	neutral zinc metallopeptidase
CLQ68_RS08530	COG1444	tRNA N-acetyltransferase activity
CLQ68_RS08535	COG0400	carboxylic ester hydrolase activity
CLQ68_RS08550	COG1393	Belongs to the ArsC family
CLQ68_RS08560	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLQ68_RS08570	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CLQ68_RS08570	COG0493	'glutamate synthase
CLQ68_RS08580	COG5342	invasion associated locus B
CLQ68_RS08585	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CLQ68_RS08590	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CLQ68_RS08600	COG4810	utilization protein
CLQ68_RS08690	COG0860	N-Acetylmuramoyl-L-alanine amidase
CLQ68_RS08710	COG2837	iron assimilation
CLQ68_RS08720	COG4150	thiosulfate binding
CLQ68_RS08725	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CLQ68_RS08730	COG4208	sulfate ABC transporter
CLQ68_RS08735	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CLQ68_RS08745	COG4319	ketosteroid isomerase
CLQ68_RS08780	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CLQ68_RS08800	COG3530	Putative quorum-sensing-regulated virulence factor
CLQ68_RS08805	COG0385	Bile acid
CLQ68_RS08810	COG0583	DNA-binding transcription factor activity
CLQ68_RS08845	COG3415	Transposase
CLQ68_RS08850	COG3415	Transposase
CLQ68_RS08865	COG2199	diguanylate cyclase activity
CLQ68_RS08865	COG2200	EAL domain
CLQ68_RS08870	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CLQ68_RS08885	COG0667	Aldo Keto reductase
CLQ68_RS08890	COG3961	Belongs to the TPP enzyme family
CLQ68_RS08905	COG3279	Response regulator of the LytR AlgR family
CLQ68_RS08910	COG3275	phosphorelay sensor kinase activity
CLQ68_RS08920	COG0436	Aminotransferase
CLQ68_RS08930	COG2807	transmembrane transport
CLQ68_RS08935	COG0590	tRNA wobble adenosine to inosine editing
CLQ68_RS08940	COG0583	DNA-binding transcription factor activity
CLQ68_RS08960	COG2116	formate transmembrane transporter activity
CLQ68_RS08965	COG2853	Lipoprotein
CLQ68_RS08980	COG3691	Protein conserved in bacteria
CLQ68_RS08995	COG2062	phosphohistidine phosphatase, SixA
CLQ68_RS09020	COG0730	response to heat
CLQ68_RS09025	COG3101	peptidyl-lysine hydroxylation
CLQ68_RS09040	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CLQ68_RS09060	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CLQ68_RS09070	COG0586	Pfam SNARE associated Golgi protein
CLQ68_RS09080	COG0285	dihydrofolate synthase activity
CLQ68_RS09085	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
CLQ68_RS09090	COG1286	toxin biosynthetic process
CLQ68_RS09095	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CLQ68_RS09100	COG0163	prenyltransferase activity
CLQ68_RS09120	COG4160	amino acid transport
CLQ68_RS09125	COG4598	ABC transporter
CLQ68_RS09135	COG1090	epimerase
CLQ68_RS09140	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CLQ68_RS09145	COG0625	glutathione transferase activity
CLQ68_RS09150	COG0625	glutathione transferase activity
CLQ68_RS09155	COG0622	Phosphoesterase
CLQ68_RS09160	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
CLQ68_RS09165	COG0280	phosphate acetyltransferase
CLQ68_RS09165	COG0857	belongs to the CobB CobQ family
CLQ68_RS09185	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CLQ68_RS09190	COG0490	domain, Protein
CLQ68_RS09190	COG0471	metal ion transport
CLQ68_RS09200	COG0436	Aminotransferase
CLQ68_RS09260	COG0839	Belongs to the complex I subunit 6 family
CLQ68_RS09270	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CLQ68_RS09275	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLQ68_RS09290	COG2153	protein acetylation
CLQ68_RS09295	COG1169	isochorismate synthase
CLQ68_RS09320	COG0318	PFAM AMP-dependent synthetase and ligase
CLQ68_RS09330	COG5464	transposase or invertase
CLQ68_RS09345	COG1414	Transcriptional regulator
CLQ68_RS09355	COG2271	Major facilitator Superfamily
CLQ68_RS09365	COG0247	lactate metabolic process
CLQ68_RS09375	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CLQ68_RS09380	COG2271	Major facilitator Superfamily
CLQ68_RS09385	COG0584	glycerophosphoryl diester phosphodiesterase
CLQ68_RS09395	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CLQ68_RS09425	COG0784	Response regulator, receiver
CLQ68_RS09425	COG2205	protein histidine kinase activity
CLQ68_RS09435	COG0642	Histidine kinase
CLQ68_RS09435	COG2198	Histidine kinase
CLQ68_RS09450	COG2169	Transcriptional regulator
CLQ68_RS09450	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CLQ68_RS09455	COG3145	DNA-N1-methyladenine dioxygenase activity
CLQ68_RS09460	COG4615	Cyclic peptide transporter
CLQ68_RS09465	COG2239	Acts as a magnesium transporter
CLQ68_RS09470	COG0659	secondary active sulfate transmembrane transporter activity
CLQ68_RS09485	COG0628	permease
CLQ68_RS09540	COG0582	viral genome integration into host DNA
CLQ68_RS09565	COG1349	DNA-binding transcription factor activity
CLQ68_RS09570	COG0494	nUDIX hydrolase
CLQ68_RS09590	COG1061	Type III restriction enzyme res subunit
CLQ68_RS09595	COG1187	pseudouridine synthase activity
CLQ68_RS09600	COG2814	Major facilitator Superfamily
CLQ68_RS09610	COG4172	Belongs to the ABC transporter superfamily
CLQ68_RS09615	COG4239	(ABC) transporter, permease
CLQ68_RS09620	COG4174	ABC transporter (Permease)
CLQ68_RS09625	COG4166	transmembrane transport
CLQ68_RS09630	COG2200	EAL domain
CLQ68_RS09635	COG0791	NLP P60 protein
CLQ68_RS09640	COG0671	phosphoesterase, PA-phosphatase related
CLQ68_RS09645	COG0523	cobalamin synthesis protein
CLQ68_RS09650	COG0246	Mannitol dehydrogenase
CLQ68_RS09655	COG1312	Catalyzes the dehydration of D-mannonate
CLQ68_RS09680	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS09680	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS09685	COG1105	Belongs to the carbohydrate kinase PfkB family
CLQ68_RS09690	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CLQ68_RS09690	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
CLQ68_RS09690	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CLQ68_RS09700	COG2855	membrane
CLQ68_RS09710	COG0583	DNA-binding transcription factor activity
CLQ68_RS09715	COG0833	amino acid
CLQ68_RS09725	COG4771	TonB-dependent receptor
CLQ68_RS09740	COG2311	Membrane
CLQ68_RS09755	COG1129	ABC transporter
CLQ68_RS09765	COG2949	membrane
CLQ68_RS09775	COG1346	cytolysis
CLQ68_RS09785	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CLQ68_RS09790	COG3659	wide pore channel activity
CLQ68_RS09805	COG2723	6-phospho-beta-galactosidase activity
CLQ68_RS09810	COG1538	Outer membrane efflux protein
CLQ68_RS09815	COG0586	Pfam SNARE associated Golgi protein
CLQ68_RS09825	COG1686	Belongs to the peptidase S11 family
CLQ68_RS09835	COG0277	FAD linked oxidase domain protein
CLQ68_RS09840	COG1472	Belongs to the glycosyl hydrolase 3 family
CLQ68_RS09845	COG1732	Glycine betaine
CLQ68_RS09850	COG1174	glycine betaine transport
CLQ68_RS09855	COG1125	glycine betaine transport
CLQ68_RS09860	COG1174	glycine betaine transport
CLQ68_RS09870	COG3275	phosphorelay sensor kinase activity
CLQ68_RS09880	COG4807	Protein conserved in bacteria
CLQ68_RS09900	COG5455	response to cobalt ion
CLQ68_RS09905	COG0583	DNA-binding transcription factor activity
CLQ68_RS09910	COG2252	PERMEase
CLQ68_RS09920	COG0583	DNA-binding transcription factor activity
CLQ68_RS09935	COG0351	phosphomethylpyrimidine kinase
CLQ68_RS09940	COG1830	Aldolase
CLQ68_RS09950	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CLQ68_RS09975	COG1070	Carbohydrate kinase
CLQ68_RS09985	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CLQ68_RS09990	COG4948	Mandelate Racemase Muconate Lactonizing
CLQ68_RS09995	COG0747	negative chemotaxis
CLQ68_RS10000	COG0601	transmembrane transport
CLQ68_RS10005	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLQ68_RS10010	COG0444	Belongs to the ABC transporter superfamily
CLQ68_RS10015	COG4608	Belongs to the ABC transporter superfamily
CLQ68_RS10025	COG0826	peptidase U32
CLQ68_RS10030	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS10035	COG2205	protein histidine kinase activity
CLQ68_RS10060	COG1301	dicarboxylic acid transport
CLQ68_RS10075	COG5002	protein histidine kinase activity
CLQ68_RS10080	COG0443	Heat shock 70 kDa protein
CLQ68_RS10090	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CLQ68_RS10105	COG2982	Protein involved in outer membrane biogenesis
CLQ68_RS10110	COG1253	flavin adenine dinucleotide binding
CLQ68_RS10155	COG0463	Glycosyl transferase, family 2
CLQ68_RS10180	COG1088	dTDP-glucose 4,6-dehydratase activity
CLQ68_RS10210	COG3039	Transposase
CLQ68_RS10245	COG0438	transferase activity, transferring glycosyl groups
CLQ68_RS10250	COG1216	Glycosyl transferase, family 2
CLQ68_RS10250	COG1442	glycosyl transferase family 8
CLQ68_RS10260	COG0463	Glycosyl transferase, family 2
CLQ68_RS10285	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CLQ68_RS10315	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CLQ68_RS10320	COG0583	DNA-binding transcription factor activity
CLQ68_RS10330	COG0531	amino acid
CLQ68_RS10335	COG0640	Transcriptional regulator
CLQ68_RS10340	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CLQ68_RS10345	COG2925	Exonuclease
CLQ68_RS10360	COG1289	transmembrane transporter activity
CLQ68_RS10380	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
CLQ68_RS10390	COG1942	4-Oxalocrotonate Tautomerase
CLQ68_RS10395	COG0583	DNA-binding transcription factor activity
CLQ68_RS10400	COG0095	Lipoate-protein ligase
CLQ68_RS10405	COG0477	Major facilitator Superfamily
CLQ68_RS10420	COG5001	Diguanylate cyclase
CLQ68_RS10420	COG3300	MHYT domain
CLQ68_RS10425	COG3615	Tellurite resistance protein tehB
CLQ68_RS10450	COG3706	GGDEF domain
CLQ68_RS10470	COG0534	Mate efflux family protein
CLQ68_RS10480	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CLQ68_RS10500	COG0604	alcohol dehydrogenase
CLQ68_RS10505	COG1309	transcriptional regulator
CLQ68_RS10510	COG0025	NhaP-type Na H and K H
CLQ68_RS10555	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CLQ68_RS10565	COG1418	mRNA catabolic process
CLQ68_RS10570	COG0270	DNA (cytosine-5-)-methyltransferase activity
CLQ68_RS10575	COG3727	T/G mismatch-specific endonuclease activity
CLQ68_RS10580	COG0697	spore germination
CLQ68_RS10585	COG2354	Protein conserved in bacteria
CLQ68_RS10615	COG0366	Alpha amylase catalytic
CLQ68_RS10620	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLQ68_RS10630	COG0765	amino acid transport
CLQ68_RS10635	COG1126	abc transporter atp-binding protein
CLQ68_RS10640	COG2197	response regulator
CLQ68_RS10650	COG2197	response regulator
CLQ68_RS10690	COG3318	Belongs to the UPF0149 family
CLQ68_RS10690	COG3012	SEC-C Motif Domain Protein
CLQ68_RS10695	COG0814	amino acid
CLQ68_RS10705	COG1528	Iron-storage protein
CLQ68_RS10720	COG0477	Major facilitator Superfamily
CLQ68_RS10730	COG2211	Major facilitator Superfamily
CLQ68_RS10740	COG1528	Iron-storage protein
CLQ68_RS10750	COG1879	ABC-type sugar transport system periplasmic component
CLQ68_RS10760	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS10785	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
CLQ68_RS10795	COG3102	Protein conserved in bacteria
CLQ68_RS10815	COG3788	relative of glutathione S-transferase, MAPEG superfamily
CLQ68_RS10820	COG1801	Protein of unknown function DUF72
CLQ68_RS10825	COG0582	viral genome integration into host DNA
CLQ68_RS10890	COG1846	Transcriptional regulator
CLQ68_RS10935	COG4725	Belongs to the MT-A70-like family
CLQ68_RS10950	COG3772	lysozyme
CLQ68_RS10980	COG1802	Transcriptional regulator
CLQ68_RS10980	COG4626	Terminase
CLQ68_RS10990	COG4695	Portal protein
CLQ68_RS11095	COG1335	isochorismatase
CLQ68_RS11105	COG0494	nUDIX hydrolase
CLQ68_RS11130	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CLQ68_RS11140	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
CLQ68_RS11145	COG0739	heme binding
CLQ68_RS11150	COG1560	Kdo2-lipid A biosynthetic process
CLQ68_RS11160	COG1737	Transcriptional regulator
CLQ68_RS11175	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CLQ68_RS11180	COG0129	dihydroxy-acid dehydratase activity
CLQ68_RS11185	COG0800	Aldolase
CLQ68_RS11195	COG3141	response to X-ray
CLQ68_RS11200	COG2979	Protein of unknown function (DUF533)
CLQ68_RS11205	COG1770	oligopeptidase
CLQ68_RS11210	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CLQ68_RS11220	COG2372	response to copper ion
CLQ68_RS11225	COG1276	copper resistance
CLQ68_RS11240	COG2990	Protein conserved in bacteria
CLQ68_RS11265	COG3008	intermembrane lipid transfer
CLQ68_RS11270	COG2995	paraquat-inducible protein a
CLQ68_RS11275	COG1956	GAF domain-containing protein
CLQ68_RS11295	COG2814	Major facilitator Superfamily
CLQ68_RS11305	COG1414	Transcriptional regulator
CLQ68_RS11345	COG0768	penicillin binding
CLQ68_RS11350	COG2226	methyltransferase
CLQ68_RS11365	COG3716	PTS system mannose fructose sorbose family IID component
CLQ68_RS11370	COG3715	PTS system
CLQ68_RS11375	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CLQ68_RS11375	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS11380	COG1253	flavin adenine dinucleotide binding
CLQ68_RS11385	COG2200	EAL domain
CLQ68_RS11390	COG1760	l-serine dehydratase
CLQ68_RS11410	COG0251	oxidation-reduction process
CLQ68_RS11415	COG1199	ATP-dependent helicase activity
CLQ68_RS11425	COG3065	identical protein binding
CLQ68_RS11435	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
CLQ68_RS11445	COG2894	cell division
CLQ68_RS11460	COG0179	Fumarylacetoacetate (FAA) hydrolase
CLQ68_RS11490	COG2719	SpoVR family
CLQ68_RS11510	COG1619	proteins homologs of microcin C7 resistance protein MccF
CLQ68_RS11520	COG4774	siderophore transport
CLQ68_RS11535	COG2308	Evidence 4 Homologs of previously reported genes of
CLQ68_RS11580	COG0583	DNA-binding transcription factor activity
CLQ68_RS11585	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CLQ68_RS11600	COG1882	Formate acetyltransferase
CLQ68_RS11630	COG0583	DNA-binding transcription factor activity
CLQ68_RS11660	COG0583	DNA-binding transcription factor activity
CLQ68_RS11675	COG3122	Protein conserved in bacteria
CLQ68_RS11705	COG2885	chlorophyll binding
CLQ68_RS11780	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CLQ68_RS11845	COG0012	GTP binding
CLQ68_RS11865	COG0659	secondary active sulfate transmembrane transporter activity
CLQ68_RS11900	COG2890	protein-(glutamine-N5) methyltransferase activity
CLQ68_RS11920	COG0387	Pfam Sodium calcium exchanger
CLQ68_RS11925	COG4572	Cation transport regulator
CLQ68_RS11930	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
CLQ68_RS11940	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
CLQ68_RS11945	COG3707	response regulator
CLQ68_RS11950	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CLQ68_RS11960	COG1116	anion transmembrane transporter activity
CLQ68_RS11965	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CLQ68_RS11965	COG2146	nitrite reductase [NAD(P)H] activity
CLQ68_RS11970	COG0243	molybdopterin cofactor binding
CLQ68_RS11975	COG4932	domain protein
CLQ68_RS11980	COG2197	response regulator
CLQ68_RS11985	COG3850	Histidine kinase
CLQ68_RS11990	COG2223	nitrite transmembrane transporter activity
CLQ68_RS11995	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CLQ68_RS12000	COG1140	nitrate reductase beta subunit
CLQ68_RS12005	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CLQ68_RS12010	COG2181	nitrate reductase activity
CLQ68_RS12020	COG1522	sequence-specific DNA binding
CLQ68_RS12045	COG0788	formyltetrahydrofolate deformylase activity
CLQ68_RS12055	COG1752	Esterase of the alpha-beta hydrolase superfamily
CLQ68_RS12060	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS12065	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CLQ68_RS12070	COG2916	Histone family protein nucleoid-structuring protein H-NS
CLQ68_RS12075	COG1435	thymidine kinase activity
CLQ68_RS12080	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS12080	COG1454	alcohol dehydrogenase
CLQ68_RS12090	COG2095	MarC family integral membrane protein
CLQ68_RS12095	COG4166	transmembrane transport
CLQ68_RS12100	COG0601	transmembrane transport
CLQ68_RS12105	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLQ68_RS12110	COG0444	Belongs to the ABC transporter superfamily
CLQ68_RS12120	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CLQ68_RS12140	COG2353	YceI-like domain
CLQ68_RS12150	COG2350	Protein conserved in bacteria
CLQ68_RS12160	COG3001	Fructosamine kinase
CLQ68_RS12170	COG1105	Belongs to the carbohydrate kinase PfkB family
CLQ68_RS12175	COG3137	Salt-induced outer membrane protein
CLQ68_RS12215	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CLQ68_RS12215	COG0072	phenylalanine-tRNA ligase activity
CLQ68_RS12235	COG0583	DNA-binding transcription factor activity
CLQ68_RS12255	COG0386	Belongs to the glutathione peroxidase family
CLQ68_RS12265	COG0791	NLP P60 protein
CLQ68_RS12275	COG4256	Hemin uptake protein
CLQ68_RS12280	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CLQ68_RS12290	COG0574	Belongs to the PEP-utilizing enzyme family
CLQ68_RS12290	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CLQ68_RS12300	COG0628	permease
CLQ68_RS12305	COG0247	lactate metabolic process
CLQ68_RS12305	COG0277	FAD linked oxidase domain protein
CLQ68_RS12310	COG2050	protein possibly involved in aromatic compounds catabolism
CLQ68_RS12315	COG2261	transglycosylase associated protein
CLQ68_RS12360	COG1120	ATPase activity
CLQ68_RS12365	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS12375	COG0583	DNA-binding transcription factor activity
CLQ68_RS12400	COG1304	FMN binding
CLQ68_RS12405	COG1309	transcriptional regulator
CLQ68_RS12420	COG0316	Belongs to the HesB IscA family
CLQ68_RS12425	COG0719	Fe-S assembly protein
CLQ68_RS12430	COG0396	ATPase activity
CLQ68_RS12435	COG0719	Fe-S assembly protein
CLQ68_RS12450	COG1376	ErfK ybiS ycfS ynhG family protein
CLQ68_RS12475	COG1309	transcriptional regulator
CLQ68_RS12480	COG3185	4-Hydroxyphenylpyruvate dioxygenase
CLQ68_RS12480	COG1082	Xylose isomerase domain protein TIM barrel
CLQ68_RS12485	COG2271	Major facilitator Superfamily
CLQ68_RS12490	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CLQ68_RS12500	COG1120	ATPase activity
CLQ68_RS12505	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS12510	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CLQ68_RS12515	COG1414	Transcriptional regulator
CLQ68_RS12550	COG2814	Major facilitator Superfamily
CLQ68_RS12570	COG0583	DNA-binding transcription factor activity
CLQ68_RS12575	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CLQ68_RS12595	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLQ68_RS12600	COG1116	anion transmembrane transporter activity
CLQ68_RS12605	COG4774	siderophore transport
CLQ68_RS12610	COG1120	ATPase activity
CLQ68_RS12615	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS12620	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS12640	COG0765	amino acid transport
CLQ68_RS12645	COG1126	abc transporter atp-binding protein
CLQ68_RS12675	COG1473	amidohydrolase
CLQ68_RS12680	COG3383	formate dehydrogenase (NAD+) activity
CLQ68_RS12685	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CLQ68_RS12700	COG1175	transmembrane transport
CLQ68_RS12730	COG4133	protoheme IX ABC transporter activity
CLQ68_RS12735	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CLQ68_RS12740	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CLQ68_RS12755	COG1138	Cytochrome C-type biogenesis protein
CLQ68_RS12760	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CLQ68_RS12765	COG4235	cytochrome complex assembly
CLQ68_RS12765	COG3088	subunit of a heme lyase
CLQ68_RS12785	COG3850	Histidine kinase
CLQ68_RS12785	COG5002	protein histidine kinase activity
CLQ68_RS12790	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS12810	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLQ68_RS12845	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS12850	COG2610	gluconate transmembrane transporter activity
CLQ68_RS12855	COG1250	3-hydroxyacyl-CoA dehydrogenase
CLQ68_RS12865	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CLQ68_RS12875	COG0583	DNA-binding transcription factor activity
CLQ68_RS12905	COG2814	Major facilitator Superfamily
CLQ68_RS12920	COG0277	FAD linked oxidase domain protein
CLQ68_RS12925	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLQ68_RS12950	COG0402	S-adenosylhomocysteine deaminase activity
CLQ68_RS13010	COG4608	Belongs to the ABC transporter superfamily
CLQ68_RS13015	COG0444	Belongs to the ABC transporter superfamily
CLQ68_RS13040	COG0346	lactoylglutathione lyase activity
CLQ68_RS13045	COG1349	DNA-binding transcription factor activity
CLQ68_RS13075	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CLQ68_RS13095	COG0300	oxidoreductase activity
CLQ68_RS13150	COG0307	riboflavin synthase, alpha
CLQ68_RS13155	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CLQ68_RS13160	COG2814	Major facilitator Superfamily
CLQ68_RS13165	COG0583	DNA-binding transcription factor activity
CLQ68_RS13180	COG2814	Major facilitator Superfamily
CLQ68_RS13195	COG0791	NLP P60 protein
CLQ68_RS13200	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CLQ68_RS13210	COG0346	lactoylglutathione lyase activity
CLQ68_RS13215	COG1902	pentaerythritol trinitrate reductase activity
CLQ68_RS13220	COG1309	transcriptional regulator
CLQ68_RS13225	COG3313	Fe-S protein
CLQ68_RS13230	COG4989	oxidoreductase activity
CLQ68_RS13235	COG2032	superoxide dismutase activity
CLQ68_RS13240	COG1289	transmembrane transporter activity
CLQ68_RS13245	COG1566	PFAM secretion protein HlyD family protein
CLQ68_RS13260	COG3706	GGDEF domain
CLQ68_RS13275	COG3895	Periplasmic Protein
CLQ68_RS13290	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
CLQ68_RS13295	COG0625	glutathione transferase activity
CLQ68_RS13310	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CLQ68_RS13320	COG4659	FMN binding
CLQ68_RS13355	COG2723	6-phospho-beta-galactosidase activity
CLQ68_RS13365	COG0673	inositol 2-dehydrogenase activity
CLQ68_RS13375	COG2814	Major facilitator Superfamily
CLQ68_RS13395	COG3038	cytochrome b561
CLQ68_RS13415	COG0583	DNA-binding transcription factor activity
CLQ68_RS13420	COG3485	protocatechuate 3,4-dioxygenase
CLQ68_RS13425	COG3485	protocatechuate 3,4-dioxygenase
CLQ68_RS13430	COG5383	Protein conserved in bacteria
CLQ68_RS13435	COG2272	Belongs to the type-B carboxylesterase lipase family
CLQ68_RS13450	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CLQ68_RS13455	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CLQ68_RS13460	COG1275	C4-dicarboxylate transporter malic acid transport protein
CLQ68_RS13465	COG0500	methyltransferase
CLQ68_RS13475	COG0697	spore germination
CLQ68_RS13480	COG3708	Transcriptional regulator
CLQ68_RS13480	COG2207	Transcriptional regulator
CLQ68_RS13485	COG3135	benzoate transporter
CLQ68_RS13490	COG1396	sequence-specific DNA binding
CLQ68_RS13500	COG0826	peptidase U32
CLQ68_RS13520	COG1294	oxidase, subunit
CLQ68_RS13525	COG1271	oxidase subunit
CLQ68_RS13530	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CLQ68_RS13535	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CLQ68_RS13540	COG3842	ATPase activity
CLQ68_RS13545	COG1176	ABC-type spermidine putrescine transport system, permease component I
CLQ68_RS13550	COG1177	transmembrane transport
CLQ68_RS13555	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS13585	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS13590	COG0747	negative chemotaxis
CLQ68_RS13600	COG3238	Protein conserved in bacteria
CLQ68_RS13605	COG1247	-acetyltransferase
CLQ68_RS13615	COG2130	NADP-dependent
CLQ68_RS13630	COG3691	Protein conserved in bacteria
CLQ68_RS13635	COG1228	amidohydrolase
CLQ68_RS13640	COG4772	TonB-dependent receptor
CLQ68_RS13665	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CLQ68_RS13670	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CLQ68_RS13675	COG1473	amidohydrolase
CLQ68_RS13680	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CLQ68_RS13685	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLQ68_RS13695	COG0765	amino acid transport
CLQ68_RS13700	COG1126	abc transporter atp-binding protein
CLQ68_RS13720	COG1609	Transcriptional regulator
CLQ68_RS13725	COG0625	glutathione transferase activity
CLQ68_RS13750	COG2211	Major facilitator Superfamily
CLQ68_RS13765	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CLQ68_RS13770	COG3842	ATPase activity
CLQ68_RS13775	COG1840	ABC-type Fe3 transport system, periplasmic component
CLQ68_RS13780	COG1178	ABC-type Fe3 transport system permease component
CLQ68_RS13785	COG2162	N-hydroxyarylamine O-acetyltransferase activity
CLQ68_RS13790	COG2181	nitrate reductase activity
CLQ68_RS13795	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CLQ68_RS13800	COG1140	nitrate reductase beta subunit
CLQ68_RS13805	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CLQ68_RS13825	COG1414	Transcriptional regulator
CLQ68_RS13830	COG4948	Mandelate Racemase Muconate Lactonizing
CLQ68_RS13835	COG4829	muconolactone delta-isomerase
CLQ68_RS13840	COG3485	protocatechuate 3,4-dioxygenase
CLQ68_RS13850	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
CLQ68_RS13870	COG0243	molybdopterin cofactor binding
CLQ68_RS13870	COG3383	formate dehydrogenase (NAD+) activity
CLQ68_RS13875	COG3383	formate dehydrogenase (NAD+) activity
CLQ68_RS13875	COG0243	molybdopterin cofactor binding
CLQ68_RS13880	COG0437	4 iron, 4 sulfur cluster binding
CLQ68_RS13885	COG2864	formate dehydrogenase
CLQ68_RS13900	COG2326	polyphosphate kinase activity
CLQ68_RS13910	COG2814	Major facilitator Superfamily
CLQ68_RS13920	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CLQ68_RS13930	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLQ68_RS13940	COG0747	negative chemotaxis
CLQ68_RS13945	COG1064	alcohol dehydrogenase
CLQ68_RS13960	COG0488	(ABC) transporter
CLQ68_RS14000	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS14005	COG3729	General stress protein
CLQ68_RS14025	COG3685	Protein conserved in bacteria
CLQ68_RS14035	COG0366	Alpha amylase catalytic
CLQ68_RS14055	COG3111	PFAM Bacterial OB fold (BOF) protein
CLQ68_RS14060	COG1764	response to oxidative stress
CLQ68_RS14085	COG3781	membrane
CLQ68_RS14090	COG0243	molybdopterin cofactor binding
CLQ68_RS14095	COG0583	DNA-binding transcription factor activity
CLQ68_RS14100	COG1447	Phosphotransferase system cellobiose-specific component IIA
CLQ68_RS14105	COG2814	Major facilitator Superfamily
CLQ68_RS14115	COG1285	pathogenesis
CLQ68_RS14120	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CLQ68_RS14130	COG0583	DNA-binding transcription factor activity
CLQ68_RS14150	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CLQ68_RS14150	COG0519	Catalyzes the synthesis of GMP from XMP
CLQ68_RS14190	COG0596	Alpha beta hydrolase
CLQ68_RS14200	COG2205	protein histidine kinase activity
CLQ68_RS14215	COG0076	glutamate decarboxylase activity
CLQ68_RS14220	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CLQ68_RS14225	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CLQ68_RS14230	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLQ68_RS14235	COG1116	anion transmembrane transporter activity
CLQ68_RS14240	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CLQ68_RS14255	COG0673	inositol 2-dehydrogenase activity
CLQ68_RS14265	COG1609	Transcriptional regulator
CLQ68_RS14270	COG3706	GGDEF domain
CLQ68_RS14275	COG0402	S-adenosylhomocysteine deaminase activity
CLQ68_RS14280	COG1953	Uracil, thiamine, allantoin
CLQ68_RS14315	COG0596	Alpha beta hydrolase
CLQ68_RS14330	COG2207	Transcriptional regulator
CLQ68_RS14350	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CLQ68_RS14415	COG0765	amino acid transport
CLQ68_RS14425	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CLQ68_RS14435	COG2070	2-Nitropropane dioxygenase
CLQ68_RS14440	COG0583	DNA-binding transcription factor activity
CLQ68_RS14450	COG1902	pentaerythritol trinitrate reductase activity
CLQ68_RS14455	COG4529	Protein conserved in bacteria
CLQ68_RS14460	COG0477	Major facilitator Superfamily
CLQ68_RS14505	COG2223	nitrite transmembrane transporter activity
CLQ68_RS14515	COG1609	Transcriptional regulator
CLQ68_RS14520	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS14530	COG3037	sugar-specific permease SgaT UlaA
CLQ68_RS14535	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CLQ68_RS14545	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CLQ68_RS14550	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
CLQ68_RS14550	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CLQ68_RS14550	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CLQ68_RS14560	COG1652	LysM domain
CLQ68_RS14590	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CLQ68_RS14590	COG0456	acetyltransferase
CLQ68_RS14600	COG0667	Aldo Keto reductase
CLQ68_RS14605	COG0667	Aldo Keto reductase
CLQ68_RS14610	COG3386	PFAM SMP-30 Gluconolaconase
CLQ68_RS14615	COG0667	Aldo Keto reductase
CLQ68_RS14640	COG2801	Transposase and inactivated derivatives
CLQ68_RS14650	COG4977	sequence-specific DNA binding
CLQ68_RS14670	COG4977	sequence-specific DNA binding
CLQ68_RS14675	COG1349	DNA-binding transcription factor activity
CLQ68_RS14690	COG1349	DNA-binding transcription factor activity
CLQ68_RS14695	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CLQ68_RS14700	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CLQ68_RS14705	COG0738	Major facilitator superfamily
CLQ68_RS14730	COG0183	Belongs to the thiolase family
CLQ68_RS14750	COG1929	Belongs to the glycerate kinase type-1 family
CLQ68_RS14755	COG3835	regulator
CLQ68_RS14775	COG2186	Transcriptional regulator
CLQ68_RS14780	COG1263	PTS System
CLQ68_RS14780	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CLQ68_RS14790	COG2814	Major facilitator Superfamily
CLQ68_RS14795	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS14795	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS14805	COG2819	hydrolase of the alpha beta superfamily
CLQ68_RS14810	COG5001	Diguanylate cyclase
CLQ68_RS14810	COG3300	MHYT domain
CLQ68_RS14845	COG3188	usher protein
CLQ68_RS14860	COG1649	PFAM Uncharacterised BCR, COG1649
CLQ68_RS14865	COG3550	peptidyl-serine autophosphorylation
CLQ68_RS14870	COG1396	sequence-specific DNA binding
CLQ68_RS14875	COG2351	hydroxyisourate hydrolase activity
CLQ68_RS14880	COG3195	allantoin biosynthetic process
CLQ68_RS14880	COG3648	Uricase
CLQ68_RS14885	COG2233	PERMEase
CLQ68_RS14915	COG2207	Transcriptional regulator
CLQ68_RS14930	COG4628	conserved protein (DUF2132)
CLQ68_RS14950	COG2011	ABC-type metal ion transport system permease component
CLQ68_RS14955	COG2070	2-Nitropropane dioxygenase
CLQ68_RS14965	COG0477	Major facilitator Superfamily
CLQ68_RS15025	COG2199	diguanylate cyclase activity
CLQ68_RS15040	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS15045	COG0583	DNA-binding transcription factor activity
CLQ68_RS15055	COG0039	L-malate dehydrogenase activity
CLQ68_RS15060	COG1349	DNA-binding transcription factor activity
CLQ68_RS15065	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CLQ68_RS15070	COG3395	kinase activity
CLQ68_RS15080	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CLQ68_RS15085	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CLQ68_RS15090	COG2271	Major facilitator Superfamily
CLQ68_RS15115	COG4977	sequence-specific DNA binding
CLQ68_RS15125	COG0697	spore germination
CLQ68_RS15130	COG2814	Major facilitator Superfamily
CLQ68_RS15165	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CLQ68_RS15205	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CLQ68_RS15220	COG1349	DNA-binding transcription factor activity
CLQ68_RS15230	COG2084	Dehydrogenase
CLQ68_RS15235	COG3395	kinase activity
CLQ68_RS15240	COG0235	Class ii aldolase
CLQ68_RS15245	COG3622	Belongs to the hyi family
CLQ68_RS15250	COG2610	gluconate transmembrane transporter activity
CLQ68_RS15255	COG3708	Transcriptional regulator
CLQ68_RS15255	COG2207	Transcriptional regulator
CLQ68_RS15270	COG2200	EAL domain
CLQ68_RS15275	COG1546	Belongs to the CinA family
CLQ68_RS15280	COG0071	Belongs to the small heat shock protein (HSP20) family
CLQ68_RS15300	COG2135	peptidase activity
CLQ68_RS15305	COG2207	Transcriptional regulator
CLQ68_RS15320	COG4221	oxidoreductase activity
CLQ68_RS15325	COG1802	Transcriptional regulator
CLQ68_RS15330	COG0589	response to stress
CLQ68_RS15335	COG0246	Mannitol dehydrogenase
CLQ68_RS15340	COG2271	Major facilitator Superfamily
CLQ68_RS15355	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CLQ68_RS15370	COG0243	molybdopterin cofactor binding
CLQ68_RS15375	COG0437	4 iron, 4 sulfur cluster binding
CLQ68_RS15380	COG3302	dmso reductase anchor subunit
CLQ68_RS15395	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CLQ68_RS15400	COG1940	carbohydrate kinase activity
CLQ68_RS15405	COG0583	DNA-binding transcription factor activity
CLQ68_RS15410	COG2814	Major facilitator Superfamily
CLQ68_RS15415	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CLQ68_RS15425	COG3591	Belongs to the peptidase S1B family
CLQ68_RS15445	COG0628	permease
CLQ68_RS15475	COG0679	Auxin Efflux Carrier
CLQ68_RS15485	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CLQ68_RS15510	COG3290	protein histidine kinase activity
CLQ68_RS15515	COG4565	transcriptional regulatory protein
CLQ68_RS15540	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CLQ68_RS15540	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CLQ68_RS15565	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CLQ68_RS15570	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CLQ68_RS15580	COG0183	Belongs to the thiolase family
CLQ68_RS15585	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CLQ68_RS15595	COG1414	Transcriptional regulator
CLQ68_RS15600	COG2840	Smr protein MutS2
CLQ68_RS15605	COG0583	DNA-binding transcription factor activity
CLQ68_RS15615	COG1473	amidohydrolase
CLQ68_RS15620	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
CLQ68_RS15635	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CLQ68_RS15650	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CLQ68_RS15655	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CLQ68_RS15675	COG0531	amino acid
CLQ68_RS15685	COG3136	membrane protein required for alginate biosynthesis
CLQ68_RS15690	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS15700	COG2205	protein histidine kinase activity
CLQ68_RS15710	COG0114	fumarate hydratase activity
CLQ68_RS15715	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CLQ68_RS15715	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CLQ68_RS15720	COG1482	cell wall glycoprotein biosynthetic process
CLQ68_RS15725	COG5339	Protein conserved in bacteria
CLQ68_RS15730	COG1609	Transcriptional regulator
CLQ68_RS15735	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CLQ68_RS15735	COG1263	PTS System
CLQ68_RS15740	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CLQ68_RS15765	COG2391	methyltransferase activity
CLQ68_RS15770	COG0425	Belongs to the sulfur carrier protein TusA family
CLQ68_RS15775	COG5562	phage envelope protein
CLQ68_RS15780	COG0401	homolog of Blt101
CLQ68_RS15785	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CLQ68_RS15790	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS15795	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CLQ68_RS15800	COG0477	Major facilitator Superfamily
CLQ68_RS15805	COG1113	amino acid transport
CLQ68_RS15810	COG2988	succinylglutamate desuccinylase activity
CLQ68_RS15815	COG3724	N-succinylarginine dihydrolase activity
CLQ68_RS15820	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS15825	COG3138	arginine N-succinyltransferase
CLQ68_RS15830	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CLQ68_RS15835	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CLQ68_RS15840	COG0667	Aldo Keto reductase
CLQ68_RS15845	COG0583	DNA-binding transcription factor activity
CLQ68_RS15870	COG4122	O-methyltransferase activity
CLQ68_RS15875	COG1643	Atp-dependent helicase
CLQ68_RS15890	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CLQ68_RS15895	COG3327	negative regulation of DNA-templated transcription, initiation
CLQ68_RS15900	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
CLQ68_RS15905	COG0183	Belongs to the thiolase family
CLQ68_RS15910	COG2050	protein possibly involved in aromatic compounds catabolism
CLQ68_RS15915	COG1250	3-hydroxyacyl-CoA dehydrogenase
CLQ68_RS15920	COG1024	Enoyl-CoA hydratase
CLQ68_RS15925	COG1024	Enoyl-CoA hydratase
CLQ68_RS15930	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CLQ68_RS15935	COG2151	metal-sulfur cluster biosynthetic enzyme
CLQ68_RS15940	COG3396	Phenylacetate-CoA oxygenase
CLQ68_RS15945	COG3460	Phenylacetate-CoA oxygenase
CLQ68_RS15950	COG3396	Phenylacetate-CoA oxygenase
CLQ68_RS15955	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS15955	COG2030	dehydratase
CLQ68_RS15980	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS15985	COG2207	Transcriptional regulator
CLQ68_RS15990	COG3784	Protein of unknown function (DUF1318)
CLQ68_RS16000	COG2911	Protein conserved in bacteria
CLQ68_RS16005	COG0586	Pfam SNARE associated Golgi protein
CLQ68_RS16010	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CLQ68_RS16015	COG3187	Heat shock protein
CLQ68_RS16020	COG3042	response to heat
CLQ68_RS16030	COG0674	pyruvate-flavodoxin oxidoreductase activity
CLQ68_RS16030	COG1013	pyruvate-flavodoxin oxidoreductase activity
CLQ68_RS16030	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLQ68_RS16030	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CLQ68_RS16035	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CLQ68_RS16045	COG0589	response to stress
CLQ68_RS16055	COG0513	Belongs to the DEAD box helicase family
CLQ68_RS16075	COG1349	DNA-binding transcription factor activity
CLQ68_RS16080	COG0673	inositol 2-dehydrogenase activity
CLQ68_RS16095	COG1113	amino acid transport
CLQ68_RS16100	COG1522	sequence-specific DNA binding
CLQ68_RS16110	COG1448	Aminotransferase
CLQ68_RS16115	COG2011	ABC-type metal ion transport system permease component
CLQ68_RS16130	COG0436	Aminotransferase
CLQ68_RS16135	COG0604	alcohol dehydrogenase
CLQ68_RS16180	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS16185	COG1309	transcriptional regulator
CLQ68_RS16190	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS16270	COG2885	chlorophyll binding
CLQ68_RS16295	COG0693	protein deglycase activity
CLQ68_RS16300	COG1078	dGTPase activity
CLQ68_RS16305	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS16310	COG0583	DNA-binding transcription factor activity
CLQ68_RS16330	COG0656	L-ascorbic acid biosynthetic process
CLQ68_RS16360	COG4166	transmembrane transport
CLQ68_RS16365	COG2866	Carboxypeptidase
CLQ68_RS16370	COG4948	Mandelate Racemase Muconate Lactonizing
CLQ68_RS16375	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CLQ68_RS16380	COG3180	Ammonia monooxygenase
CLQ68_RS16390	COG1486	melibiose metabolic process
CLQ68_RS16395	COG0583	DNA-binding transcription factor activity
CLQ68_RS16405	COG3106	COG3106 Predicted ATPase
CLQ68_RS16415	COG1983	PspC domain protein
CLQ68_RS16425	COG1842	Phage shock protein A
CLQ68_RS16430	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CLQ68_RS16440	COG1473	amidohydrolase
CLQ68_RS16455	COG0702	epimerase
CLQ68_RS16470	COG4171	peptide transport system, permease
CLQ68_RS16485	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CLQ68_RS16495	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CLQ68_RS16500	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CLQ68_RS16500	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CLQ68_RS16515	COG1349	DNA-binding transcription factor activity
CLQ68_RS16525	COG0023	Translation Initiation Factor
CLQ68_RS16535	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CLQ68_RS16540	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
CLQ68_RS16545	COG0671	phosphoesterase, PA-phosphatase related
CLQ68_RS16555	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CLQ68_RS16585	COG0616	signal peptide processing
CLQ68_RS16595	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS16600	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
CLQ68_RS16670	COG0582	viral genome integration into host DNA
CLQ68_RS16695	COG0583	DNA-binding transcription factor activity
CLQ68_RS16705	COG0009	L-threonylcarbamoyladenylate synthase
CLQ68_RS16715	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CLQ68_RS16720	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CLQ68_RS16720	COG0512	Glutamine amidotransferase of anthranilate synthase
CLQ68_RS16725	COG0134	indole-3-glycerol-phosphate synthase activity
CLQ68_RS16725	COG0135	phosphoribosylanthranilate isomerase activity
CLQ68_RS16760	COG4774	siderophore transport
CLQ68_RS16770	COG3047	cAMP biosynthetic process
CLQ68_RS16775	COG0727	PFAM Uncharacterised protein family (UPF0153)
CLQ68_RS16805	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CLQ68_RS16810	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS16815	COG1988	membrane-bound metal-dependent
CLQ68_RS16820	COG1823	symporter activity
CLQ68_RS16830	COG0753	catalase activity
CLQ68_RS16840	COG1486	melibiose metabolic process
CLQ68_RS16845	COG2169	Transcriptional regulator
CLQ68_RS16845	COG1917	Cupin 2, conserved barrel domain protein
CLQ68_RS16850	COG1447	Phosphotransferase system cellobiose-specific component IIA
CLQ68_RS16855	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS16860	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS16865	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CLQ68_RS16875	COG0322	excinuclease ABC activity
CLQ68_RS16880	COG3678	ATP-independent chaperone mediated protein folding
CLQ68_RS16890	COG3724	N-succinylarginine dihydrolase activity
CLQ68_RS16900	COG3138	arginine N-succinyltransferase
CLQ68_RS16910	COG0708	Exodeoxyribonuclease III
CLQ68_RS16915	COG0398	Pfam SNARE associated Golgi protein
CLQ68_RS16920	COG0398	Pfam SNARE associated Golgi protein
CLQ68_RS16925	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CLQ68_RS16930	COG4134	Bacterial extracellular solute-binding protein
CLQ68_RS16935	COG4135	transport system, permease component
CLQ68_RS16940	COG4136	ATPase activity
CLQ68_RS16945	COG2897	thiosulfate sulfurtransferase activity
CLQ68_RS16950	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CLQ68_RS16955	COG0494	nUDIX hydrolase
CLQ68_RS16960	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CLQ68_RS16965	COG3321	synthase
CLQ68_RS16965	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS16965	COG0604	alcohol dehydrogenase
CLQ68_RS16970	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CLQ68_RS16975	COG0709	Synthesizes selenophosphate from selenide and ATP
CLQ68_RS16990	COG0778	Nitroreductase
CLQ68_RS16995	COG0616	signal peptide processing
CLQ68_RS17000	COG0252	asparaginase activity
CLQ68_RS17005	COG1335	isochorismatase
CLQ68_RS17020	COG3139	Protein of unknown function (DUF1315)
CLQ68_RS17040	COG0656	L-ascorbic acid biosynthetic process
CLQ68_RS17045	COG3713	MltA-interacting MipA family protein
CLQ68_RS17050	COG2766	serine protein kinase
CLQ68_RS17065	COG0386	Belongs to the glutathione peroxidase family
CLQ68_RS17085	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS17090	COG0583	DNA-binding transcription factor activity
CLQ68_RS17095	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CLQ68_RS17100	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CLQ68_RS17105	COG3344	reverse transcriptase
CLQ68_RS17120	COG0859	PFAM glycosyl transferase family 9
CLQ68_RS17125	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CLQ68_RS17135	COG2207	Transcriptional regulator
CLQ68_RS17140	COG2807	transmembrane transport
CLQ68_RS17145	COG0504	CTP synthase activity
CLQ68_RS17150	COG1683	Conserved Protein
CLQ68_RS17155	COG3189	MarR family transcriptional regulator
CLQ68_RS17160	COG3042	response to heat
CLQ68_RS17165	COG2203	Gaf domain
CLQ68_RS17165	COG2199	diguanylate cyclase activity
CLQ68_RS17185	COG3182	Iron-regulated membrane protein
CLQ68_RS17195	COG1560	Kdo2-lipid A biosynthetic process
CLQ68_RS17210	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
CLQ68_RS17215	COG3706	GGDEF domain
CLQ68_RS17220	COG0583	DNA-binding transcription factor activity
CLQ68_RS17225	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CLQ68_RS17250	COG1294	oxidase, subunit
CLQ68_RS17255	COG1271	oxidase subunit
CLQ68_RS17260	COG3546	catalase activity
CLQ68_RS17265	COG3685	Protein conserved in bacteria
CLQ68_RS17270	COG3685	Protein conserved in bacteria
CLQ68_RS17275	COG3729	General stress protein
CLQ68_RS17280	COG1063	alcohol dehydrogenase
CLQ68_RS17285	COG3813	Protein conserved in bacteria
CLQ68_RS17305	COG0640	Transcriptional regulator
CLQ68_RS17310	COG0538	isocitrate dehydrogenase activity
CLQ68_RS17400	COG0616	signal peptide processing
CLQ68_RS17415	COG4626	Terminase
CLQ68_RS17415	COG1802	Transcriptional regulator
CLQ68_RS17460	COG3772	lysozyme
CLQ68_RS17475	COG1403	HNH endonuclease
CLQ68_RS17580	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CLQ68_RS17590	COG0582	viral genome integration into host DNA
CLQ68_RS17595	COG0538	isocitrate dehydrogenase activity
CLQ68_RS17600	COG1187	pseudouridine synthase activity
CLQ68_RS17620	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CLQ68_RS17645	COG2850	peptidyl-arginine hydroxylation
CLQ68_RS17665	COG1177	transmembrane transport
CLQ68_RS17680	COG0318	PFAM AMP-dependent synthetase and ligase
CLQ68_RS17685	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CLQ68_RS17690	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CLQ68_RS17695	COG0698	ribose 5-phosphate isomerase
CLQ68_RS17710	COG3395	kinase activity
CLQ68_RS17725	COG2390	Transcriptional regulator
CLQ68_RS17735	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CLQ68_RS17745	COG4591	ABC-type transport system involved in lipoprotein release permease component
CLQ68_RS17755	COG4591	ABC-type transport system involved in lipoprotein release permease component
CLQ68_RS17760	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CLQ68_RS17765	COG1388	LysM domain
CLQ68_RS17765	COG1376	ErfK ybiS ycfS ynhG family protein
CLQ68_RS17775	COG1309	transcriptional regulator
CLQ68_RS17785	COG3134	Outer membrane lipoprotein
CLQ68_RS17790	COG1252	NADH dehydrogenase
CLQ68_RS17815	COG5633	Lipoprotein
CLQ68_RS17820	COG0537	adenosine 5'-monophosphoramidase activity
CLQ68_RS17830	COG0084	hydrolase, TatD family'
CLQ68_RS17835	COG0470	DNA polymerase III
CLQ68_RS17845	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CLQ68_RS17850	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CLQ68_RS17855	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CLQ68_RS17870	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CLQ68_RS17890	COG1399	metal-binding, possibly nucleic acid-binding protein
CLQ68_RS17910	COG1530	ribonuclease E activity
CLQ68_RS17915	COG0583	DNA-binding transcription factor activity
CLQ68_RS17920	COG2814	Major facilitator Superfamily
CLQ68_RS17940	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CLQ68_RS17990	COG1560	Kdo2-lipid A biosynthetic process
CLQ68_RS18010	COG5645	(Lipo)protein
CLQ68_RS18050	COG3381	protein complex oligomerization
CLQ68_RS18075	COG0583	DNA-binding transcription factor activity
CLQ68_RS18085	COG1335	isochorismatase
CLQ68_RS18095	COG1702	phosphate starvation-inducible protein PhoH
CLQ68_RS18115	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CLQ68_RS18125	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CLQ68_RS18145	COG1309	transcriptional regulator
CLQ68_RS18180	COG2233	PERMEase
CLQ68_RS18190	COG3729	General stress protein
CLQ68_RS18215	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS18230	COG0531	amino acid
CLQ68_RS18240	COG0174	glutamine synthetase
CLQ68_RS18245	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CLQ68_RS18250	COG1396	sequence-specific DNA binding
CLQ68_RS18250	COG1917	Cupin 2, conserved barrel domain protein
CLQ68_RS18255	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS18260	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CLQ68_RS18265	COG0583	DNA-binding transcription factor activity
CLQ68_RS18270	COG0473	3-isopropylmalate dehydrogenase activity
CLQ68_RS18275	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CLQ68_RS18280	COG4638	Rieske (2fe-2S)
CLQ68_RS18285	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS18290	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CLQ68_RS18315	COG0670	Belongs to the BI1 family
CLQ68_RS18330	COG2207	Transcriptional regulator
CLQ68_RS18335	COG1881	PFAM PEBP family protein
CLQ68_RS18350	COG1832	CoA-binding protein
CLQ68_RS18360	COG0210	DNA helicase
CLQ68_RS18365	COG3304	Inner membrane component domain
CLQ68_RS18370	COG1289	transmembrane transporter activity
CLQ68_RS18375	COG3070	regulator of competence-specific genes
CLQ68_RS18400	COG1067	ATP-dependent peptidase activity
CLQ68_RS18410	COG3130	regulation of translation
CLQ68_RS18420	COG3009	Protein conserved in bacteria
CLQ68_RS18425	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CLQ68_RS18425	COG3008	intermembrane lipid transfer
CLQ68_RS18430	COG2995	paraquat-inducible protein a
CLQ68_RS18435	COG0488	(ABC) transporter
CLQ68_RS18445	COG3217	Mosc domain protein beta barrel domain protein
CLQ68_RS18445	COG0633	Ferredoxin
CLQ68_RS18460	COG0431	NADPH-dependent FMN reductase
CLQ68_RS18465	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CLQ68_RS18470	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CLQ68_RS18475	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLQ68_RS18485	COG0308	aminopeptidase N
CLQ68_RS18500	COG1473	amidohydrolase
CLQ68_RS18510	COG0814	amino acid
CLQ68_RS18520	COG1522	sequence-specific DNA binding
CLQ68_RS18530	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CLQ68_RS18535	COG1448	Aminotransferase
CLQ68_RS18540	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CLQ68_RS18545	COG3108	Peptidase M15
CLQ68_RS18555	COG2989	Protein conserved in bacteria
CLQ68_RS18565	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
CLQ68_RS18575	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CLQ68_RS18580	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CLQ68_RS18585	COG3173	Aminoglycoside phosphotransferase
CLQ68_RS18600	COG3214	Protein conserved in bacteria
CLQ68_RS18615	COG0658	competence protein
CLQ68_RS18615	COG2333	competence protein COMEC
CLQ68_RS18625	COG0539	negative regulation of cytoplasmic translation
CLQ68_RS18645	COG2323	membrane
CLQ68_RS18650	COG1944	ATP diphosphatase activity
CLQ68_RS18655	COG2116	formate transmembrane transporter activity
CLQ68_RS18660	COG1882	Formate acetyltransferase
CLQ68_RS18665	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CLQ68_RS18670	COG0477	Major facilitator Superfamily
CLQ68_RS18680	COG3302	dmso reductase anchor subunit
CLQ68_RS18685	COG0437	4 iron, 4 sulfur cluster binding
CLQ68_RS18690	COG0243	molybdopterin cofactor binding
CLQ68_RS18700	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CLQ68_RS18710	COG1674	ftsk spoiiie
CLQ68_RS18710	COG1178	ABC-type Fe3 transport system permease component
CLQ68_RS18720	COG0492	ferredoxin-NADP+ reductase activity
CLQ68_RS18725	COG4988	ABC transporter
CLQ68_RS18730	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CLQ68_RS18745	COG0542	response to heat
CLQ68_RS18755	COG1278	Cold shock
CLQ68_RS18770	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLQ68_RS18775	COG3593	DNA synthesis involved in DNA repair
CLQ68_RS18785	COG2431	L-lysine efflux transmembrane transporter activity
CLQ68_RS18795	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CLQ68_RS18805	COG0028	Belongs to the TPP enzyme family
CLQ68_RS18810	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
CLQ68_RS18815	COG0702	epimerase
CLQ68_RS18820	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CLQ68_RS18825	COG3023	N-Acetylmuramoyl-L-alanine amidase
CLQ68_RS18830	COG2203	Gaf domain
CLQ68_RS18830	COG3706	GGDEF domain
CLQ68_RS18830	COG4251	negative regulation of phosphorylation
CLQ68_RS18830	COG5001	Diguanylate cyclase
CLQ68_RS18845	COG1126	abc transporter atp-binding protein
CLQ68_RS18850	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLQ68_RS18855	COG4215	(ABC) transporter
CLQ68_RS18860	COG4160	amino acid transport
CLQ68_RS18865	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLQ68_RS18870	COG5002	protein histidine kinase activity
CLQ68_RS18875	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS18890	COG1177	transmembrane transport
CLQ68_RS18895	COG1176	ABC-type spermidine putrescine transport system, permease component I
CLQ68_RS18900	COG3842	ATPase activity
CLQ68_RS18905	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CLQ68_RS18920	COG0778	Nitroreductase
CLQ68_RS18945	COG3226	Transcriptional regulator
CLQ68_RS18950	COG0738	Major facilitator superfamily
CLQ68_RS18955	COG0561	phosphatase activity
CLQ68_RS18960	COG2814	Major facilitator Superfamily
CLQ68_RS18970	COG0671	phosphoesterase, PA-phosphatase related
CLQ68_RS18975	COG1349	DNA-binding transcription factor activity
CLQ68_RS18980	COG1686	Belongs to the peptidase S11 family
CLQ68_RS19000	COG2133	pyrroloquinoline quinone binding
CLQ68_RS19010	COG2223	nitrite transmembrane transporter activity
CLQ68_RS19035	COG0747	negative chemotaxis
CLQ68_RS19040	COG4172	Belongs to the ABC transporter superfamily
CLQ68_RS19050	COG0303	'Molybdopterin
CLQ68_RS19055	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CLQ68_RS19060	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CLQ68_RS19065	COG1882	Formate acetyltransferase
CLQ68_RS19070	COG0561	phosphatase activity
CLQ68_RS19080	COG1609	Transcriptional regulator
CLQ68_RS19085	COG2271	Major facilitator Superfamily
CLQ68_RS19095	COG0488	(ABC) transporter
CLQ68_RS19100	COG2365	Tyrosine phosphatase family
CLQ68_RS19105	COG1376	ErfK ybiS ycfS ynhG family protein
CLQ68_RS19110	COG2188	Transcriptional regulator
CLQ68_RS19115	COG2723	6-phospho-beta-galactosidase activity
CLQ68_RS19120	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CLQ68_RS19135	COG2194	sulfuric ester hydrolase activity
CLQ68_RS19140	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
CLQ68_RS19155	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLQ68_RS19160	COG0765	amino acid transport
CLQ68_RS19165	COG1126	abc transporter atp-binding protein
CLQ68_RS19170	COG0668	transmembrane transport
CLQ68_RS19180	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CLQ68_RS19190	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CLQ68_RS19200	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CLQ68_RS19205	COG1199	ATP-dependent helicase activity
CLQ68_RS19210	COG0513	Belongs to the DEAD box helicase family
CLQ68_RS19215	COG3958	Transketolase
CLQ68_RS19220	COG3959	Transketolase, thiamine diphosphate binding domain
CLQ68_RS19225	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS19230	COG2271	Major facilitator Superfamily
CLQ68_RS19235	COG0583	DNA-binding transcription factor activity
CLQ68_RS19240	COG1309	transcriptional regulator
CLQ68_RS19245	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLQ68_RS19250	COG1131	(ABC) transporter
CLQ68_RS19255	COG0842	Transport permease protein
CLQ68_RS19260	COG0842	Transport permease protein
CLQ68_RS19275	COG3568	Endonuclease Exonuclease Phosphatase
CLQ68_RS19280	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CLQ68_RS19285	COG0392	lysyltransferase activity
CLQ68_RS19300	COG0670	Belongs to the BI1 family
CLQ68_RS19305	COG0314	molybdopterin synthase activity
CLQ68_RS19310	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CLQ68_RS19320	COG0521	Mo-molybdopterin cofactor biosynthetic process
CLQ68_RS19345	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS19350	COG0642	Histidine kinase
CLQ68_RS19385	COG2226	methyltransferase
CLQ68_RS19405	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CLQ68_RS19410	COG1881	PFAM PEBP family protein
CLQ68_RS19450	COG4677	pectinesterase activity
CLQ68_RS19460	COG0589	response to stress
CLQ68_RS19465	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLQ68_RS19495	COG0789	Transcriptional regulator
CLQ68_RS19500	COG2200	EAL domain
CLQ68_RS19525	COG0561	phosphatase activity
CLQ68_RS19530	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
CLQ68_RS19535	COG4149	molybdate abc transporter
CLQ68_RS19540	COG0725	ABC transporter, periplasmic molybdate-binding protein
CLQ68_RS19550	COG3585	molybdate ion transport
CLQ68_RS19550	COG2005	Transcriptional regulator
CLQ68_RS19555	COG1119	ATPase activity
CLQ68_RS19565	COG1085	galactose-1-phosphate uridylyltransferase
CLQ68_RS19575	COG2017	converts alpha-aldose to the beta-anomer
CLQ68_RS19585	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CLQ68_RS19600	COG3201	nicotinamide mononucleotide transporter
CLQ68_RS19605	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
CLQ68_RS19650	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
CLQ68_RS19655	COG2885	chlorophyll binding
CLQ68_RS19665	COG3064	Membrane
CLQ68_RS19670	COG0848	biopolymer transport protein
CLQ68_RS19675	COG0811	peptide transport
CLQ68_RS19680	COG0824	Thioesterase
CLQ68_RS19685	COG3790	cyd operon protein YbgE
CLQ68_RS19690	COG4890	Cyd operon protein YbgT
CLQ68_RS19695	COG1294	oxidase, subunit
CLQ68_RS19700	COG1271	oxidase subunit
CLQ68_RS19705	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CLQ68_RS19715	COG0508	dehydrogenase complex catalyzes the overall conversion of
CLQ68_RS19720	COG0567	Dehydrogenase, E1 component
CLQ68_RS19725	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CLQ68_RS19730	COG1053	succinate dehydrogenase
CLQ68_RS19735	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
CLQ68_RS19740	COG2009	succinate dehydrogenase
CLQ68_RS19785	COG1984	allophanate hydrolase subunit 2
CLQ68_RS19790	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CLQ68_RS19805	COG0415	Belongs to the DNA photolyase family
CLQ68_RS19835	COG2205	protein histidine kinase activity
CLQ68_RS19840	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS19850	COG0033	Phosphoglucomutase
CLQ68_RS19860	COG0596	Alpha beta hydrolase
CLQ68_RS19875	COG0735	belongs to the Fur family
CLQ68_RS19920	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CLQ68_RS19925	COG1940	carbohydrate kinase activity
CLQ68_RS19925	COG1846	Transcriptional regulator
CLQ68_RS19930	COG0647	UMP catabolic process
CLQ68_RS19935	COG0367	asparagine synthase
CLQ68_RS19980	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CLQ68_RS19990	COG1702	phosphate starvation-inducible protein PhoH
CLQ68_RS20015	COG0765	amino acid transport
CLQ68_RS20020	COG0765	amino acid transport
CLQ68_RS20025	COG1126	abc transporter atp-binding protein
CLQ68_RS20040	COG2888	peptidyl-tyrosine sulfation
CLQ68_RS20055	COG1466	dna polymerase III delta subunit
CLQ68_RS20075	COG0799	negative regulation of ribosome biogenesis
CLQ68_RS20085	COG0768	penicillin binding
CLQ68_RS20090	COG0772	Belongs to the SEDS family
CLQ68_RS20095	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CLQ68_RS20100	COG1686	Belongs to the peptidase S11 family
CLQ68_RS20115	COG0583	DNA-binding transcription factor activity
CLQ68_RS20125	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CLQ68_RS20130	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CLQ68_RS20150	COG3069	C4-dicarboxylate transmembrane transporter activity
CLQ68_RS20155	COG3719	Belongs to the RNase T2 family
CLQ68_RS20160	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CLQ68_RS20180	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CLQ68_RS20185	COG0583	DNA-binding transcription factor activity
CLQ68_RS20190	COG3969	phosphoadenosine phosphosulfate
CLQ68_RS20195	COG1475	DNA binding
CLQ68_RS20200	COG0436	Aminotransferase
CLQ68_RS20225	COG1129	ABC transporter
CLQ68_RS20230	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS20235	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS20245	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CLQ68_RS20260	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CLQ68_RS20270	COG0402	S-adenosylhomocysteine deaminase activity
CLQ68_RS20280	COG0483	inositol monophosphate 1-phosphatase activity
CLQ68_RS20285	COG2271	Major facilitator Superfamily
CLQ68_RS20315	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS20320	COG1129	ABC transporter
CLQ68_RS20325	COG0371	Dehydrogenase
CLQ68_RS20330	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS20345	COG2879	small protein
CLQ68_RS20350	COG1966	Carbon starvation protein
CLQ68_RS20360	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS20365	COG1535	isochorismatase
CLQ68_RS20365	COG3433	isochorismatase activity
CLQ68_RS20370	COG1021	2,3-dihydroxybenzoate-AMP ligase
CLQ68_RS20375	COG1169	isochorismate synthase
CLQ68_RS20380	COG4592	Periplasmic binding protein
CLQ68_RS20390	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS20395	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS20400	COG1120	ATPase activity
CLQ68_RS20405	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CLQ68_RS20405	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
CLQ68_RS20410	COG3251	PFAM MbtH domain protein
CLQ68_RS20415	COG2382	esterase
CLQ68_RS20420	COG4771	TonB-dependent receptor
CLQ68_RS20425	COG2977	Belongs to the P-Pant transferase superfamily
CLQ68_RS20430	COG3958	Transketolase
CLQ68_RS20435	COG3959	Transketolase, thiamine diphosphate binding domain
CLQ68_RS20445	COG2390	Transcriptional regulator
CLQ68_RS20450	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CLQ68_RS20455	COG1879	ABC-type sugar transport system periplasmic component
CLQ68_RS20465	COG1129	ABC transporter
CLQ68_RS20470	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS20480	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS20490	COG0583	DNA-binding transcription factor activity
CLQ68_RS20495	COG0668	transmembrane transport
CLQ68_RS20505	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CLQ68_RS20535	COG0747	negative chemotaxis
CLQ68_RS20540	COG0601	transmembrane transport
CLQ68_RS20545	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLQ68_RS20550	COG0444	Belongs to the ABC transporter superfamily
CLQ68_RS20555	COG4608	Belongs to the ABC transporter superfamily
CLQ68_RS20560	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CLQ68_RS20565	COG4221	oxidoreductase activity
CLQ68_RS20575	COG4215	(ABC) transporter
CLQ68_RS20580	COG0765	amino acid transport
CLQ68_RS20585	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
CLQ68_RS20600	COG0697	spore germination
CLQ68_RS20615	COG4608	Belongs to the ABC transporter superfamily
CLQ68_RS20620	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLQ68_RS20630	COG4166	transmembrane transport
CLQ68_RS20640	COG3698	Phosphodiester glycosidase
CLQ68_RS20685	COG2315	Protein conserved in bacteria
CLQ68_RS20690	COG0778	Nitroreductase
CLQ68_RS20700	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CLQ68_RS20710	COG3716	PTS system mannose fructose sorbose family IID component
CLQ68_RS20715	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CLQ68_RS20720	COG2222	sugar isomerase
CLQ68_RS20725	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CLQ68_RS20725	COG3933	PFAM sigma-54 factor interaction domain-containing protein
CLQ68_RS20745	COG0477	Major facilitator Superfamily
CLQ68_RS20750	COG0668	transmembrane transport
CLQ68_RS20755	COG1609	Transcriptional regulator
CLQ68_RS20765	COG0673	inositol 2-dehydrogenase activity
CLQ68_RS20775	COG2211	Major facilitator Superfamily
CLQ68_RS20780	COG1113	amino acid transport
CLQ68_RS20795	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS20800	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CLQ68_RS20815	COG0531	amino acid
CLQ68_RS20870	COG0667	Aldo Keto reductase
CLQ68_RS20875	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLQ68_RS20880	COG1473	amidohydrolase
CLQ68_RS20900	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS20905	COG1120	ATPase activity
CLQ68_RS20910	COG1566	PFAM secretion protein HlyD family protein
CLQ68_RS20955	COG4211	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS20960	COG1129	ABC transporter
CLQ68_RS20975	COG0673	inositol 2-dehydrogenase activity
CLQ68_RS21005	COG3104	oligopeptide transport
CLQ68_RS21010	COG1982	Orn Lys Arg decarboxylase major
CLQ68_RS21015	COG0531	amino acid
CLQ68_RS21020	COG3710	Transcriptional regulator
CLQ68_RS21030	COG1560	Kdo2-lipid A biosynthetic process
CLQ68_RS21045	COG3188	usher protein
CLQ68_RS21050	COG3121	Chaperone
CLQ68_RS21055	COG3539	Fimbrial protein
CLQ68_RS21110	COG2501	S4 domain
CLQ68_RS21120	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CLQ68_RS21140	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CLQ68_RS21145	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CLQ68_RS21160	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
CLQ68_RS21165	COG4181	ATPase activity
CLQ68_RS21170	COG2755	lipolytic protein G-D-S-L family
CLQ68_RS21175	COG0300	oxidoreductase activity
CLQ68_RS21180	COG3118	belongs to the thioredoxin family
CLQ68_RS21190	COG0390	transport system, permease component
CLQ68_RS21195	COG4619	ABC transporter
CLQ68_RS21200	COG0330	HflC and HflK could
CLQ68_RS21205	COG1585	Membrane protein implicated in regulation of membrane protease activity
CLQ68_RS21220	COG3735	TraB family
CLQ68_RS21225	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CLQ68_RS21235	COG2223	nitrite transmembrane transporter activity
CLQ68_RS21240	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CLQ68_RS21240	COG4651	solute:proton antiporter activity
CLQ68_RS21245	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CLQ68_RS21290	COG2832	Protein of unknown function (DUF454)
CLQ68_RS21295	COG3923	Primosomal replication protein n
CLQ68_RS21310	COG3264	Mechanosensitive ion channel
CLQ68_RS21310	COG1196	nuclear chromosome segregation
CLQ68_RS21320	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLQ68_RS21325	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLQ68_RS21340	COG0110	maltose O-acetyltransferase activity
CLQ68_RS21385	COG1874	Beta-galactosidase
CLQ68_RS21390	COG3867	Arabinogalactan endo-beta-1,4-galactanase
CLQ68_RS21395	COG3833	ABC-type maltose transport systems, permease component
CLQ68_RS21400	COG1175	transmembrane transport
CLQ68_RS21405	COG2182	Extracellular solute-binding protein
CLQ68_RS21415	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CLQ68_RS21430	COG2364	Membrane
CLQ68_RS21460	COG3695	enzyme binding
CLQ68_RS21465	COG3126	Type III secretion system lipoprotein chaperone (YscW)
CLQ68_RS21470	COG1946	Acyl-CoA thioesterase
CLQ68_RS21475	COG0004	ammonium transporteR
CLQ68_RS21480	COG0347	Belongs to the P(II) protein family
CLQ68_RS21485	COG1132	(ABC) transporter
CLQ68_RS21490	COG1132	(ABC) transporter
CLQ68_RS21495	COG1522	sequence-specific DNA binding
CLQ68_RS21510	COG4533	DNA binding
CLQ68_RS21520	COG0824	Thioesterase
CLQ68_RS21525	COG1555	photosystem II stabilization
CLQ68_RS21530	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CLQ68_RS21535	COG0776	regulation of translation
CLQ68_RS21540	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CLQ68_RS21570	COG0271	Belongs to the BolA IbaG family
CLQ68_RS21575	COG3056	Lipoprotein
CLQ68_RS21580	COG2223	nitrite transmembrane transporter activity
CLQ68_RS21585	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CLQ68_RS21590	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CLQ68_RS21595	COG1845	cytochrome c oxidase, subunit III
CLQ68_RS21600	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CLQ68_RS21615	COG1414	Transcriptional regulator
CLQ68_RS21620	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CLQ68_RS21625	COG1053	succinate dehydrogenase
CLQ68_RS21635	COG1053	succinate dehydrogenase
CLQ68_RS21650	COG0673	inositol 2-dehydrogenase activity
CLQ68_RS21655	COG2814	Major facilitator Superfamily
CLQ68_RS21665	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CLQ68_RS21670	COG0693	protein deglycase activity
CLQ68_RS21690	COG0142	geranyltranstransferase activity
CLQ68_RS21700	COG0667	Aldo Keto reductase
CLQ68_RS21705	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CLQ68_RS21725	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CLQ68_RS21725	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CLQ68_RS21735	COG4238	major outer membrane lipoprotein
CLQ68_RS21755	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CLQ68_RS21760	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CLQ68_RS21765	COG1862	Preprotein translocase
CLQ68_RS21785	COG0450	alkyl hydroperoxide reductase
CLQ68_RS21790	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS21805	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CLQ68_RS21815	COG1228	amidohydrolase
CLQ68_RS21825	COG1335	isochorismatase
CLQ68_RS21830	COG0583	DNA-binding transcription factor activity
CLQ68_RS21835	COG0366	Alpha amylase catalytic
CLQ68_RS21860	COG0420	3'-5' exonuclease activity
CLQ68_RS21865	COG0419	ATPase involved in DNA repair
CLQ68_RS21870	COG1940	carbohydrate kinase activity
CLQ68_RS21885	COG4126	flavin adenine dinucleotide binding
CLQ68_RS21895	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CLQ68_RS21900	COG3416	Protein conserved in bacteria
CLQ68_RS21910	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CLQ68_RS21920	COG1785	Belongs to the alkaline phosphatase family
CLQ68_RS21960	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
CLQ68_RS21965	COG1335	isochorismatase
CLQ68_RS21970	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CLQ68_RS21975	COG0113	porphobilinogen synthase activity
CLQ68_RS21980	COG1943	Transposase
CLQ68_RS21990	COG2175	clavaminate synthase activity
CLQ68_RS21995	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLQ68_RS22000	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
CLQ68_RS22005	COG4521	taurine ABC transporter
CLQ68_RS22010	COG2040	homocysteine
CLQ68_RS22015	COG0833	amino acid
CLQ68_RS22025	COG4303	Ethanolamine ammonia lyase large subunit
CLQ68_RS22030	COG4302	ethanolamine ammonia-lyase activity
CLQ68_RS22065	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLQ68_RS22070	COG1126	abc transporter atp-binding protein
CLQ68_RS22075	COG4597	amino acid ABC transporter
CLQ68_RS22080	COG0765	amino acid transport
CLQ68_RS22095	COG3188	usher protein
CLQ68_RS22120	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
CLQ68_RS22130	COG3639	organic phosphonate transmembrane transporter activity
CLQ68_RS22155	COG0791	NLP P60 protein
CLQ68_RS22205	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CLQ68_RS22210	COG0022	dehydrogenase e1 component
CLQ68_RS22215	COG0508	dehydrogenase complex catalyzes the overall conversion of
CLQ68_RS22220	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CLQ68_RS22230	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CLQ68_RS22250	COG0579	oxidoreductase
CLQ68_RS22255	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS22260	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CLQ68_RS22265	COG1113	amino acid transport
CLQ68_RS22270	COG1802	Transcriptional regulator
CLQ68_RS22290	COG2195	Cleaves the N-terminal amino acid of tripeptides
CLQ68_RS22295	COG0454	-acetyltransferase
CLQ68_RS22310	COG2991	Protein conserved in bacteria
CLQ68_RS22325	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
CLQ68_RS22330	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
CLQ68_RS22350	COG3034	peptidoglycan biosynthetic process
CLQ68_RS22355	COG0121	glutamine amidotransferase
CLQ68_RS22365	COG1960	acyl-CoA dehydrogenase activity
CLQ68_RS22370	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CLQ68_RS22380	COG0583	DNA-binding transcription factor activity
CLQ68_RS22395	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CLQ68_RS22405	COG2226	methyltransferase
CLQ68_RS22415	COG0741	lytic transglycosylase activity
CLQ68_RS22415	COG1388	LysM domain
CLQ68_RS22420	COG2226	methyltransferase
CLQ68_RS22430	COG2814	Major facilitator Superfamily
CLQ68_RS22435	COG0583	DNA-binding transcription factor activity
CLQ68_RS22440	COG0656	L-ascorbic acid biosynthetic process
CLQ68_RS22480	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CLQ68_RS22490	COG2011	ABC-type metal ion transport system permease component
CLQ68_RS22495	COG1464	Belongs to the NlpA lipoprotein family
CLQ68_RS22505	COG1720	tRNA m6t6A37 methyltransferase activity
CLQ68_RS22515	COG0791	NLP P60 protein
CLQ68_RS22520	COG3015	lipoprotein NlpE involved in copper resistance
CLQ68_RS22525	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CLQ68_RS22540	COG4568	rho-dependent transcription termination
CLQ68_RS22550	COG0346	lactoylglutathione lyase activity
CLQ68_RS22555	COG1982	Orn Lys Arg decarboxylase major
CLQ68_RS22565	COG0587	DNA-directed DNA polymerase activity
CLQ68_RS22595	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
CLQ68_RS22605	COG0750	zinc metalloprotease
CLQ68_RS22610	COG0575	Belongs to the CDS family
CLQ68_RS22625	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CLQ68_RS22650	COG0024	Methionine aminopeptidase
CLQ68_RS22655	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
CLQ68_RS22670	COG3835	regulator
CLQ68_RS22675	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CLQ68_RS22695	COG2860	membrane
CLQ68_RS22715	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS22720	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CLQ68_RS22725	COG1120	ATPase activity
CLQ68_RS22730	COG4774	siderophore transport
CLQ68_RS22735	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CLQ68_RS22825	COG1643	Atp-dependent helicase
CLQ68_RS22830	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
CLQ68_RS22850	COG0617	tRNA 3'-terminal CCA addition
CLQ68_RS22855	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CLQ68_RS22875	COG0726	polysaccharide deacetylase
CLQ68_RS22880	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS22885	COG0842	Transport permease protein
CLQ68_RS22890	COG1131	(ABC) transporter
CLQ68_RS22895	COG0288	reversible hydration of carbon dioxide
CLQ68_RS22905	COG4993	Dehydrogenase
CLQ68_RS22910	COG2132	Multicopper oxidase
CLQ68_RS22955	COG3064	Membrane
CLQ68_RS22970	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CLQ68_RS22975	COG0508	dehydrogenase complex catalyzes the overall conversion of
CLQ68_RS22980	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
CLQ68_RS22985	COG2186	Transcriptional regulator
CLQ68_RS22990	COG1113	amino acid transport
CLQ68_RS22995	COG2211	Major facilitator Superfamily
CLQ68_RS23000	COG3940	Belongs to the glycosyl hydrolase 43 family
CLQ68_RS23005	COG3725	Membrane protein required for beta-lactamase induction
CLQ68_RS23010	COG3023	N-Acetylmuramoyl-L-alanine amidase
CLQ68_RS23020	COG4969	Belongs to the N-Me-Phe pilin family
CLQ68_RS23025	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CLQ68_RS23030	COG1459	type II secretion system
CLQ68_RS23055	COG0494	nUDIX hydrolase
CLQ68_RS23075	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CLQ68_RS23080	COG0849	cell division
CLQ68_RS23105	COG0772	Belongs to the SEDS family
CLQ68_RS23120	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CLQ68_RS23125	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CLQ68_RS23130	COG0768	penicillin binding
CLQ68_RS23155	COG1609	Transcriptional regulator
CLQ68_RS23165	COG0028	Belongs to the TPP enzyme family
CLQ68_RS23215	COG0738	Major facilitator superfamily
CLQ68_RS23225	COG0583	DNA-binding transcription factor activity
CLQ68_RS23230	COG2271	Major facilitator Superfamily
CLQ68_RS23235	COG2814	Major facilitator Superfamily
CLQ68_RS23255	COG1178	ABC-type Fe3 transport system permease component
CLQ68_RS23265	COG0586	Pfam SNARE associated Golgi protein
CLQ68_RS23285	COG0235	Class ii aldolase
CLQ68_RS23290	COG0417	DNA replication proofreading
CLQ68_RS23300	COG0564	pseudouridine synthase activity
CLQ68_RS23315	COG3493	citrate carrier protein
CLQ68_RS23330	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CLQ68_RS23335	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CLQ68_RS23345	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CLQ68_RS23395	COG0505	Belongs to the CarA family
CLQ68_RS23490	COG1047	Peptidyl-prolyl cis-trans
CLQ68_RS23505	COG0196	riboflavin kinase activity
CLQ68_RS23525	COG0583	DNA-binding transcription factor activity
CLQ68_RS23550	COG4735	regulation of single-species biofilm formation
CLQ68_RS23555	COG1584	GPR1 FUN34 yaaH family protein
CLQ68_RS23560	COG0477	Major facilitator Superfamily
CLQ68_RS23565	COG0521	Mo-molybdopterin cofactor biosynthetic process
CLQ68_RS23570	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CLQ68_RS23575	COG1115	amino acid carrier protein
CLQ68_RS23590	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
CLQ68_RS23600	COG0527	aspartate kinase activity
CLQ68_RS23600	COG0460	homoserine dehydrogenase
CLQ68_RS23610	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
CLQ68_RS23625	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS23630	COG4452	Inner membrane protein CreD
CLQ68_RS23635	COG2205	protein histidine kinase activity
CLQ68_RS23640	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS23645	COG3045	CreA protein
CLQ68_RS23650	COG3708	Transcriptional regulator
CLQ68_RS23650	COG2207	Transcriptional regulator
CLQ68_RS23670	COG0741	lytic transglycosylase activity
CLQ68_RS23680	COG0488	(ABC) transporter
CLQ68_RS23690	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CLQ68_RS23695	COG0560	Phosphoserine phosphatase
CLQ68_RS23705	COG3726	membrane protein affecting hemolysin expression
CLQ68_RS23735	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CLQ68_RS23740	COG0084	hydrolase, TatD family'
CLQ68_RS23745	COG4667	esterase of the alpha-beta hydrolase superfamily
CLQ68_RS23755	COG2823	Periplasmic or secreted lipoprotein
CLQ68_RS23765	COG1011	Hydrolase
CLQ68_RS23770	COG0456	acetyltransferase
CLQ68_RS23775	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
CLQ68_RS23805	COG3706	GGDEF domain
CLQ68_RS23810	COG4114	ferric iron reductase
CLQ68_RS23815	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS23815	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS23820	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CLQ68_RS23825	COG2197	response regulator
CLQ68_RS23830	COG2197	response regulator
CLQ68_RS23850	COG2966	Psort location CytoplasmicMembrane, score
CLQ68_RS23865	COG1484	DNA-dependent DNA replication
CLQ68_RS23880	COG5464	transposase or invertase
CLQ68_RS23890	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CLQ68_RS23895	COG3716	PTS system mannose fructose sorbose family IID component
CLQ68_RS23900	COG3715	PTS system
CLQ68_RS23915	COG3933	PFAM sigma-54 factor interaction domain-containing protein
CLQ68_RS23915	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CLQ68_RS23920	COG0456	acetyltransferase
CLQ68_RS23920	COG1214	PFAM Peptidase M22, glycoprotease
CLQ68_RS23930	COG1737	Transcriptional regulator
CLQ68_RS23935	COG0800	Aldolase
CLQ68_RS23940	COG3734	2-keto-3-deoxy-galactonokinase
CLQ68_RS23955	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
CLQ68_RS23985	COG1846	Transcriptional regulator
CLQ68_RS23990	COG0179	Fumarylacetoacetate (FAA) hydrolase
CLQ68_RS24000	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS24005	COG3384	dioxygenase
CLQ68_RS24015	COG3971	2-oxopent-4-enoate hydratase activity
CLQ68_RS24035	COG2368	4-hydroxyphenylacetate
CLQ68_RS24040	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CLQ68_RS24045	COG1966	Carbon starvation protein
CLQ68_RS24050	COG2879	small protein
CLQ68_RS24055	COG0523	cobalamin synthesis protein
CLQ68_RS24065	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS24070	COG5464	transposase or invertase
CLQ68_RS24075	COG1917	Cupin 2, conserved barrel domain protein
CLQ68_RS24075	COG2207	Transcriptional regulator
CLQ68_RS24085	COG2733	membrane
CLQ68_RS24100	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
CLQ68_RS24105	COG1924	4 iron, 4 sulfur cluster binding
CLQ68_RS24120	COG1566	PFAM secretion protein HlyD family protein
CLQ68_RS24130	COG5457	Domain of unknown function (DUF1127)
CLQ68_RS24135	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CLQ68_RS24150	COG0583	DNA-binding transcription factor activity
CLQ68_RS24155	COG2249	NAD(P)H dehydrogenase (quinone) activity
CLQ68_RS24165	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS24170	COG1129	ABC transporter
CLQ68_RS24175	COG1879	ABC-type sugar transport system periplasmic component
CLQ68_RS24185	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLQ68_RS24190	COG1129	ABC transporter
CLQ68_RS24190	COG0842	Transport permease protein
CLQ68_RS24195	COG0842	Transport permease protein
CLQ68_RS24235	COG2850	peptidyl-arginine hydroxylation
CLQ68_RS24250	COG5002	protein histidine kinase activity
CLQ68_RS24255	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS24260	COG1538	Outer membrane efflux protein
CLQ68_RS24265	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLQ68_RS24270	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLQ68_RS24275	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLQ68_RS24285	COG3040	lipid binding
CLQ68_RS24290	COG0789	Transcriptional regulator
CLQ68_RS24295	COG3631	Ketosteroid isomerase-related protein
CLQ68_RS24300	COG0300	oxidoreductase activity
CLQ68_RS24315	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CLQ68_RS24335	COG3272	Protein of unknown function (DUF1722)
CLQ68_RS24340	COG4580	involved in the transport of maltose and maltodextrins
CLQ68_RS24345	COG2115	Belongs to the xylose isomerase family
CLQ68_RS24350	COG2211	Major facilitator Superfamily
CLQ68_RS24355	COG3507	Belongs to the glycosyl hydrolase 43 family
CLQ68_RS24375	COG1216	Glycosyl transferase, family 2
CLQ68_RS24435	COG1401	restriction endodeoxyribonuclease activity
CLQ68_RS24465	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
CLQ68_RS24475	COG3039	Transposase
CLQ68_RS24480	COG0732	type I restriction modification DNA specificity domain
CLQ68_RS24485	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
CLQ68_RS24510	COG0582	viral genome integration into host DNA
CLQ68_RS24565	COG0582	viral genome integration into host DNA
CLQ68_RS24580	COG0288	reversible hydration of carbon dioxide
CLQ68_RS24585	COG0659	secondary active sulfate transmembrane transporter activity
CLQ68_RS24590	COG1064	alcohol dehydrogenase
CLQ68_RS24595	COG1175	transmembrane transport
CLQ68_RS24600	COG0395	ABC-type sugar transport system, permease component
CLQ68_RS24605	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CLQ68_RS24610	COG3842	ATPase activity
CLQ68_RS24625	COG1082	Xylose isomerase domain protein TIM barrel
CLQ68_RS24635	COG3962	Belongs to the TPP enzyme family
CLQ68_RS24640	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CLQ68_RS24645	COG0837	glucose binding
CLQ68_RS24645	COG1737	Transcriptional regulator
CLQ68_RS24660	COG3718	enzyme involved in inositol metabolism
CLQ68_RS24675	COG0433	COG0433 Predicted ATPase
CLQ68_RS24680	COG0795	lipopolysaccharide-transporting ATPase activity
CLQ68_RS24685	COG0795	lipopolysaccharide-transporting ATPase activity
CLQ68_RS24700	COG2927	DNA polymerase III (CHI subunit)
CLQ68_RS24705	COG0525	valine-tRNA ligase activity
CLQ68_RS24730	COG2188	Transcriptional regulator
CLQ68_RS24735	COG1288	antiporter activity
CLQ68_RS24740	COG1228	amidohydrolase
CLQ68_RS24745	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CLQ68_RS24750	COG2222	sugar isomerase
CLQ68_RS24755	COG2731	YhcH YjgK YiaL family protein
CLQ68_RS24800	COG1263	PTS System
CLQ68_RS24800	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CLQ68_RS24805	COG0366	Alpha amylase catalytic
CLQ68_RS24810	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS24815	COG1486	melibiose metabolic process
CLQ68_RS24835	COG0602	queuosine metabolic process
CLQ68_RS24840	COG2026	Addiction module toxin, RelE StbE family
CLQ68_RS24845	COG3077	Addiction module antitoxin, RelB DinJ family
CLQ68_RS24850	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS24850	COG3711	transcriptional antiterminator
CLQ68_RS24855	COG2706	6-phosphogluconolactonase activity
CLQ68_RS24870	COG3964	amidohydrolase
CLQ68_RS24905	COG0312	modulator of DNA gyrase
CLQ68_RS24925	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CLQ68_RS24935	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS24940	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS24945	COG1129	ABC transporter
CLQ68_RS24950	COG1879	ABC-type sugar transport system periplasmic component
CLQ68_RS24970	COG2105	PFAM AIG2 family protein
CLQ68_RS24975	COG2911	Protein conserved in bacteria
CLQ68_RS24980	COG0729	surface antigen
CLQ68_RS24990	COG1253	flavin adenine dinucleotide binding
CLQ68_RS25005	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
CLQ68_RS25020	COG1733	regulation of RNA biosynthetic process
CLQ68_RS25025	COG0702	epimerase
CLQ68_RS25035	COG0697	spore germination
CLQ68_RS25045	COG1113	amino acid transport
CLQ68_RS25050	COG0545	Peptidyl-prolyl cis-trans isomerase
CLQ68_RS25055	COG3061	Opacity-associated protein A
CLQ68_RS25065	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CLQ68_RS25070	COG2965	DNA replication, synthesis of RNA primer
CLQ68_RS25130	COG1073	alpha beta
CLQ68_RS25135	COG3650	response to hydrogen peroxide
CLQ68_RS25145	COG1960	acyl-CoA dehydrogenase activity
CLQ68_RS25150	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CLQ68_RS25155	COG0557	exoribonuclease II activity
CLQ68_RS25170	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
CLQ68_RS25180	COG0330	HflC and HflK could
CLQ68_RS25185	COG0330	HflC and HflK could
CLQ68_RS25190	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CLQ68_RS25210	COG0860	N-Acetylmuramoyl-L-alanine amidase
CLQ68_RS25215	COG0802	atpase or kinase
CLQ68_RS25220	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CLQ68_RS25220	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CLQ68_RS25225	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CLQ68_RS25250	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLQ68_RS25275	COG3264	Mechanosensitive ion channel
CLQ68_RS25275	COG1511	domain protein
CLQ68_RS25290	COG1053	succinate dehydrogenase
CLQ68_RS25295	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CLQ68_RS25315	COG2076	Multidrug Resistance protein
CLQ68_RS25320	COG5510	response to toxic substance
CLQ68_RS25335	COG1509	lysine 2,3-aminomutase activity
CLQ68_RS25340	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS25375	COG3188	usher protein
CLQ68_RS25410	COG0531	amino acid
CLQ68_RS25415	COG3030	protein affecting phage T7 exclusion by the F plasmid
CLQ68_RS25425	COG1027	Aspartate ammonia-lyase
CLQ68_RS25430	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CLQ68_RS25445	COG1309	transcriptional regulator
CLQ68_RS25480	COG1649	PFAM Uncharacterised BCR, COG1649
CLQ68_RS25480	COG0726	polysaccharide deacetylase
CLQ68_RS25485	COG1215	transferase activity, transferring glycosyl groups
CLQ68_RS25505	COG0861	Integral membrane protein TerC family
CLQ68_RS25535	COG1486	melibiose metabolic process
CLQ68_RS25545	COG2169	Transcriptional regulator
CLQ68_RS25560	COG2824	Alkylphosphonate utilization operon protein PhnA
CLQ68_RS25565	COG2764	glyoxalase bleomycin resistance protein dioxygenase
CLQ68_RS25570	COG2188	Transcriptional regulator
CLQ68_RS25575	COG3624	Phosphonate C-P lyase system protein PhnG
CLQ68_RS25580	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
CLQ68_RS25585	COG3626	phosphonate metabolism
CLQ68_RS25590	COG3627	carbon phosphorus lyase activity
CLQ68_RS25595	COG4107	phosphonate C-P lyase system protein PhnK
CLQ68_RS25600	COG4778	phosphonate C-P lyase system protein PhnL
CLQ68_RS25605	COG3454	Phosphonate metabolism
CLQ68_RS25615	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CLQ68_RS25625	COG4191	Histidine kinase
CLQ68_RS25625	COG0784	Response regulator, receiver
CLQ68_RS25630	COG1129	ABC transporter
CLQ68_RS25635	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS25670	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
CLQ68_RS25675	COG1301	dicarboxylic acid transport
CLQ68_RS25695	COG3162	membrane
CLQ68_RS25725	COG3539	Fimbrial protein
CLQ68_RS25730	COG1346	cytolysis
CLQ68_RS25735	COG1380	Effector of murein hydrolase LrgA
CLQ68_RS25740	COG0583	DNA-binding transcription factor activity
CLQ68_RS25745	COG0025	NhaP-type Na H and K H
CLQ68_RS25750	COG2252	PERMEase
CLQ68_RS25755	COG0625	glutathione transferase activity
CLQ68_RS25760	COG0789	Transcriptional regulator
CLQ68_RS25770	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CLQ68_RS25805	COG1234	tRNA 3'-trailer cleavage
CLQ68_RS25810	COG1609	Transcriptional regulator
CLQ68_RS25815	COG0483	inositol monophosphate 1-phosphatase activity
CLQ68_RS25830	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CLQ68_RS25850	COG4771	TonB-dependent receptor
CLQ68_RS25855	COG0741	lytic transglycosylase activity
CLQ68_RS25875	COG2315	Protein conserved in bacteria
CLQ68_RS25880	COG0432	Pfam Uncharacterised protein family UPF0047
CLQ68_RS25895	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CLQ68_RS25900	COG0305	Participates in initiation and elongation during chromosome replication
CLQ68_RS25915	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CLQ68_RS25925	COG0735	belongs to the Fur family
CLQ68_RS25930	COG3237	CsbD-like
CLQ68_RS25935	COG0534	Mate efflux family protein
CLQ68_RS25945	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CLQ68_RS26020	COG0251	oxidation-reduction process
CLQ68_RS26030	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CLQ68_RS26050	COG0527	aspartate kinase activity
CLQ68_RS26100	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CLQ68_RS26110	COG0456	acetyltransferase
CLQ68_RS26155	COG0151	Belongs to the GarS family
CLQ68_RS26165	COG4191	Histidine kinase
CLQ68_RS26170	COG3678	ATP-independent chaperone mediated protein folding
CLQ68_RS26205	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
CLQ68_RS26220	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CLQ68_RS26225	COG2104	thiamine diphosphate biosynthetic process
CLQ68_RS26245	COG3706	GGDEF domain
CLQ68_RS26255	COG1447	Phosphotransferase system cellobiose-specific component IIA
CLQ68_RS26260	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CLQ68_RS26300	COG0250	Participates in transcription elongation, termination and antitermination
CLQ68_RS26385	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
CLQ68_RS26395	COG1739	Uncharacterized protein family UPF0029
CLQ68_RS26440	COG0805	protein transport
CLQ68_RS26460	COG3165	ubiquinone biosynthetic process from chorismate
CLQ68_RS26490	COG0583	DNA-binding transcription factor activity
CLQ68_RS26505	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CLQ68_RS26515	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CLQ68_RS26520	COG0473	3-isopropylmalate dehydrogenase activity
CLQ68_RS26525	COG1049	propionate catabolic process, 2-methylcitrate cycle
CLQ68_RS26535	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
CLQ68_RS26545	COG2301	Belongs to the HpcH HpaI aldolase family
CLQ68_RS26550	COG3051	citrate lyase alpha subunit
CLQ68_RS26585	COG0641	radical SAM
CLQ68_RS26595	COG2149	membrane
CLQ68_RS26600	COG2188	Transcriptional regulator
CLQ68_RS26620	COG0583	DNA-binding transcription factor activity
CLQ68_RS26625	COG0697	spore germination
CLQ68_RS26630	COG0561	phosphatase activity
CLQ68_RS26635	COG2267	carboxylic ester hydrolase activity
CLQ68_RS26640	COG1280	lysine exporter protein (LysE YggA)
CLQ68_RS26650	COG1280	lysine exporter protein (LysE YggA)
CLQ68_RS26685	COG0210	DNA helicase
CLQ68_RS26690	COG1011	Hydrolase
CLQ68_RS26720	COG3072	Adenylate cyclase
CLQ68_RS26735	COG2959	enzyme of heme biosynthesis
CLQ68_RS26740	COG3071	HemY protein
CLQ68_RS26785	COG2244	polysaccharide biosynthetic process
CLQ68_RS26790	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CLQ68_RS26795	COG0456	acetyltransferase
CLQ68_RS26800	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CLQ68_RS26805	COG1088	dTDP-glucose 4,6-dehydratase activity
CLQ68_RS26810	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CLQ68_RS26815	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CLQ68_RS26825	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CLQ68_RS26830	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CLQ68_RS26840	COG3118	belongs to the thioredoxin family
CLQ68_RS26870	COG1811	Na channel or pump
CLQ68_RS26880	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CLQ68_RS26885	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CLQ68_RS26895	COG0583	DNA-binding transcription factor activity
CLQ68_RS26900	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CLQ68_RS26915	COG3978	acetolactate synthase activity
CLQ68_RS26935	COG3085	chromosome segregation
CLQ68_RS27010	COG0583	DNA-binding transcription factor activity
CLQ68_RS27035	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CLQ68_RS27050	COG3443	Belongs to the bacterial solute-binding protein 9 family
CLQ68_RS27055	COG2207	Transcriptional regulator
CLQ68_RS27065	COG0371	Dehydrogenase
CLQ68_RS27075	COG0583	DNA-binding transcription factor activity
CLQ68_RS27085	COG0737	Belongs to the 5'-nucleotidase family
CLQ68_RS27095	COG0527	aspartate kinase activity
CLQ68_RS27095	COG0460	homoserine dehydrogenase
CLQ68_RS27100	COG0626	cystathionine gamma-synthase activity
CLQ68_RS27115	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CLQ68_RS27120	COG1609	Transcriptional regulator
CLQ68_RS27125	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CLQ68_RS27140	COG1575	Belongs to the MenA family. Type 1 subfamily
CLQ68_RS27160	COG3678	ATP-independent chaperone mediated protein folding
CLQ68_RS27165	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS27170	COG2205	protein histidine kinase activity
CLQ68_RS27175	COG2258	MOSC domain
CLQ68_RS27180	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CLQ68_RS27225	COG1129	ABC transporter
CLQ68_RS27230	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS27235	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS27240	COG1454	alcohol dehydrogenase
CLQ68_RS27250	COG2211	Major facilitator Superfamily
CLQ68_RS27295	COG0243	molybdopterin cofactor binding
CLQ68_RS27295	COG3383	formate dehydrogenase (NAD+) activity
CLQ68_RS27300	COG0243	molybdopterin cofactor binding
CLQ68_RS27300	COG3383	formate dehydrogenase (NAD+) activity
CLQ68_RS27305	COG0437	4 iron, 4 sulfur cluster binding
CLQ68_RS27310	COG2864	formate dehydrogenase
CLQ68_RS27325	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CLQ68_RS27335	COG0456	acetyltransferase
CLQ68_RS27350	COG1011	Hydrolase
CLQ68_RS27370	COG3852	Histidine kinase
CLQ68_RS27380	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CLQ68_RS27410	COG0204	Acyl-transferase
CLQ68_RS27420	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CLQ68_RS27425	COG3084	Protein conserved in bacteria
CLQ68_RS27435	COG1763	Mo-molybdopterin cofactor biosynthetic process
CLQ68_RS27470	COG2186	Transcriptional regulator
CLQ68_RS27475	COG0477	Major facilitator Superfamily
CLQ68_RS27480	COG1609	Transcriptional regulator
CLQ68_RS27485	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CLQ68_RS27495	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS27500	COG1129	ABC transporter
CLQ68_RS27530	COG1522	sequence-specific DNA binding
CLQ68_RS27535	COG0716	FMN binding
CLQ68_RS27550	COG3312	ion transport
CLQ68_RS27600	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CLQ68_RS27605	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CLQ68_RS27610	COG0573	inorganic phosphate transmembrane transporter activity
CLQ68_RS27615	COG0581	inorganic phosphate transmembrane transporter activity
CLQ68_RS27620	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CLQ68_RS27625	COG0704	Plays a role in the regulation of phosphate uptake
CLQ68_RS27640	COG2382	esterase
CLQ68_RS27645	COG0363	glucosamine-6-phosphate deaminase activity
CLQ68_RS27650	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CLQ68_RS27660	COG2252	PERMEase
CLQ68_RS27665	COG0431	NADPH-dependent FMN reductase
CLQ68_RS27670	COG2091	lysine biosynthetic process via aminoadipic acid
CLQ68_RS27705	COG0759	Could be involved in insertion of integral membrane proteins into the membrane