locus-tag	class	description
CLQ68_RS00025	COG3039	Transposase
CLQ68_RS00030	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CLQ68_RS00040	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CLQ68_RS00090	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLQ68_RS00120	COG0739	heme binding
CLQ68_RS00130	COG2132	Multicopper oxidase
CLQ68_RS00135	COG3667	copper resistance
CLQ68_RS00140	COG2372	response to copper ion
CLQ68_RS00145	COG1276	copper resistance
CLQ68_RS00150	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS00155	COG2205	protein histidine kinase activity
CLQ68_RS00175	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CLQ68_RS00190	COG0431	NADPH-dependent FMN reductase
CLQ68_RS00220	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CLQ68_RS00295	COG2801	Transposase and inactivated derivatives
CLQ68_RS00305	COG2801	Transposase and inactivated derivatives
CLQ68_RS00315	COG2801	Transposase and inactivated derivatives
CLQ68_RS00365	COG0789	Transcriptional regulator
CLQ68_RS00390	COG3429	Glucose-6-phosphate dehydrogenase subunit
CLQ68_RS00390	COG3409	Peptidoglycan-binding domain 1 protein
CLQ68_RS00400	COG3436	PFAM IS66 Orf2 family protein
CLQ68_RS00415	COG4172	Belongs to the ABC transporter superfamily
CLQ68_RS00430	COG0601	transmembrane transport
CLQ68_RS00435	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLQ68_RS00460	COG1595	DNA-templated transcription, initiation
CLQ68_RS00465	COG3712	iron ion homeostasis
CLQ68_RS00470	COG4772	TonB-dependent receptor
CLQ68_RS00475	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CLQ68_RS00480	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS00485	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS00490	COG1120	ATPase activity
CLQ68_RS00495	COG3436	PFAM IS66 Orf2 family protein
CLQ68_RS00525	COG1609	Transcriptional regulator
CLQ68_RS00535	COG2223	nitrite transmembrane transporter activity
CLQ68_RS00835	COG5499	transcription regulator containing HTH domain
CLQ68_RS00915	COG1475	DNA binding
CLQ68_RS00990	COG3344	reverse transcriptase
CLQ68_RS01075	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CLQ68_RS01135	COG3039	Transposase
CLQ68_RS01160	COG0673	inositol 2-dehydrogenase activity
CLQ68_RS01165	COG1324	tolerance protein
CLQ68_RS01210	COG1349	DNA-binding transcription factor activity
CLQ68_RS01255	COG1192	Involved in chromosome partitioning
CLQ68_RS01295	COG0484	heat shock protein binding
CLQ68_RS01400	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
CLQ68_RS01430	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CLQ68_RS01450	COG0187	DNA topoisomerase II activity
CLQ68_RS01455	COG0561	phosphatase activity
CLQ68_RS01470	COG2186	Transcriptional regulator
CLQ68_RS01475	COG3734	2-keto-3-deoxy-galactonokinase
CLQ68_RS01480	COG0800	Aldolase
CLQ68_RS01490	COG2271	Major facilitator Superfamily
CLQ68_RS01495	COG0823	Involved in the tonB-independent uptake of proteins
CLQ68_RS01500	COG5645	(Lipo)protein
CLQ68_RS01525	COG2188	Transcriptional regulator
CLQ68_RS01540	COG2149	membrane
CLQ68_RS01560	COG2610	gluconate transmembrane transporter activity
CLQ68_RS01565	COG0583	DNA-binding transcription factor activity
CLQ68_RS01570	COG2814	Major facilitator Superfamily
CLQ68_RS01595	COG0028	Belongs to the TPP enzyme family
CLQ68_RS01600	COG0440	acetolactate synthase activity
CLQ68_RS01605	COG2197	response regulator
CLQ68_RS01615	COG2271	Major facilitator Superfamily
CLQ68_RS01660	COG2188	Transcriptional regulator
CLQ68_RS01685	COG4580	involved in the transport of maltose and maltodextrins
CLQ68_RS01690	COG1447	Phosphotransferase system cellobiose-specific component IIA
CLQ68_RS01695	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS01695	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS01705	COG1609	Transcriptional regulator
CLQ68_RS01715	COG3384	dioxygenase
CLQ68_RS01720	COG0583	DNA-binding transcription factor activity
CLQ68_RS01725	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
CLQ68_RS01730	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
CLQ68_RS01735	COG2828	Protein conserved in bacteria
CLQ68_RS01750	COG0697	spore germination
CLQ68_RS01755	COG1263	PTS System
CLQ68_RS01755	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CLQ68_RS01765	COG2814	Major facilitator Superfamily
CLQ68_RS01775	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLQ68_RS01810	COG0583	DNA-binding transcription factor activity
CLQ68_RS01835	COG1464	Belongs to the NlpA lipoprotein family
CLQ68_RS01850	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
CLQ68_RS01860	COG1064	alcohol dehydrogenase
CLQ68_RS01890	COG2211	Major facilitator Superfamily
CLQ68_RS01895	COG1501	Belongs to the glycosyl hydrolase 31 family
CLQ68_RS01905	COG1486	melibiose metabolic process
CLQ68_RS01910	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CLQ68_RS01910	COG1263	PTS System
CLQ68_RS01915	COG2982	Protein involved in outer membrane biogenesis
CLQ68_RS01920	COG2233	PERMEase
CLQ68_RS01925	COG0786	glutamate:sodium symporter activity
CLQ68_RS01945	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CLQ68_RS01970	COG3152	Membrane
CLQ68_RS01980	COG1494	fructose-1,6-bisphosphatase
CLQ68_RS01985	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CLQ68_RS01990	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CLQ68_RS01995	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CLQ68_RS02015	COG2860	membrane
CLQ68_RS02025	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CLQ68_RS02025	COG2169	Transcriptional regulator
CLQ68_RS02035	COG1561	YicC-like family, N-terminal region
CLQ68_RS02050	COG1131	(ABC) transporter
CLQ68_RS02055	COG0842	Transport permease protein
CLQ68_RS02080	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CLQ68_RS02115	COG1519	Transferase
CLQ68_RS02120	COG1216	Glycosyl transferase, family 2
CLQ68_RS02125	COG0438	transferase activity, transferring glycosyl groups
CLQ68_RS02135	COG0859	PFAM glycosyl transferase family 9
CLQ68_RS02145	COG1216	Glycosyl transferase, family 2
CLQ68_RS02145	COG1442	glycosyl transferase family 8
CLQ68_RS02150	COG3307	-O-antigen
CLQ68_RS02155	COG0438	transferase activity, transferring glycosyl groups
CLQ68_RS02160	COG0859	PFAM glycosyl transferase family 9
CLQ68_RS02175	COG0156	8-amino-7-oxononanoate synthase activity
CLQ68_RS02185	COG0463	Glycosyl transferase, family 2
CLQ68_RS02190	COG2861	carbohydrate metabolic process
CLQ68_RS02195	COG4942	peptidase
CLQ68_RS02205	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CLQ68_RS02210	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CLQ68_RS02230	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CLQ68_RS02240	COG2186	Transcriptional regulator
CLQ68_RS02260	COG3722	fumarate hydratase activity
CLQ68_RS02280	COG1566	PFAM secretion protein HlyD family protein
CLQ68_RS02285	COG0625	glutathione transferase activity
CLQ68_RS02295	COG3276	selenocysteine insertion sequence binding
CLQ68_RS02300	COG1414	Transcriptional regulator
CLQ68_RS02305	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CLQ68_RS02310	COG3977	Valine--pyruvate aminotransferase
CLQ68_RS02315	COG0366	Alpha amylase catalytic
CLQ68_RS02325	COG2992	FlgJ-related protein
CLQ68_RS02330	COG2207	Transcriptional regulator
CLQ68_RS02330	COG1609	Transcriptional regulator
CLQ68_RS02335	COG4214	carbohydrate transport
CLQ68_RS02345	COG4213	ABC transporter substrate-binding protein
CLQ68_RS02365	COG4682	membrane
CLQ68_RS02370	COG4682	membrane
CLQ68_RS02375	COG3274	enterobacterial common antigen metabolic process
CLQ68_RS02410	COG1278	Cold shock
CLQ68_RS02415	COG2944	sequence-specific DNA binding
CLQ68_RS02420	COG2814	Major facilitator Superfamily
CLQ68_RS02445	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CLQ68_RS02455	COG1609	Transcriptional regulator
CLQ68_RS02460	COG2885	chlorophyll binding
CLQ68_RS02465	COG0243	molybdopterin cofactor binding
CLQ68_RS02470	COG0456	acetyltransferase
CLQ68_RS02475	COG2818	Glycosylase
CLQ68_RS02480	COG5571	outer membrane autotransporter
CLQ68_RS02485	COG2223	nitrite transmembrane transporter activity
CLQ68_RS02520	COG0747	negative chemotaxis
CLQ68_RS02525	COG0601	transmembrane transport
CLQ68_RS02530	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLQ68_RS02535	COG0444	Belongs to the ABC transporter superfamily
CLQ68_RS02540	COG4608	Belongs to the ABC transporter superfamily
CLQ68_RS02555	COG2894	cell division
CLQ68_RS02565	COG1215	transferase activity, transferring glycosyl groups
CLQ68_RS02570	COG0457	Tetratricopeptide repeat
CLQ68_RS02585	COG2194	sulfuric ester hydrolase activity
CLQ68_RS02615	COG1215	transferase activity, transferring glycosyl groups
CLQ68_RS02620	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CLQ68_RS02625	COG0457	Tetratricopeptide repeat
CLQ68_RS02625	COG3118	belongs to the thioredoxin family
CLQ68_RS02630	COG2200	EAL domain
CLQ68_RS02630	COG2199	diguanylate cyclase activity
CLQ68_RS02640	COG0612	Peptidase, M16
CLQ68_RS02655	COG2982	Protein involved in outer membrane biogenesis
CLQ68_RS02660	COG0477	Major facilitator Superfamily
CLQ68_RS02670	COG1295	ribonuclease BN
CLQ68_RS02675	COG0583	DNA-binding transcription factor activity
CLQ68_RS02680	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS02685	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CLQ68_RS02695	COG1454	alcohol dehydrogenase
CLQ68_RS02705	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CLQ68_RS02710	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CLQ68_RS02715	COG0671	phosphoesterase, PA-phosphatase related
CLQ68_RS02735	COG0589	response to stress
CLQ68_RS02745	COG0306	phosphate transporter
CLQ68_RS02750	COG2081	HI0933 family
CLQ68_RS02755	COG2239	Acts as a magnesium transporter
CLQ68_RS02765	COG1124	(ABC) transporter
CLQ68_RS02775	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLQ68_RS02780	COG0601	transmembrane transport
CLQ68_RS02785	COG0747	negative chemotaxis
CLQ68_RS02800	COG3479	Phenolic acid decarboxylase
CLQ68_RS02840	COG0628	permease
CLQ68_RS02845	COG0477	Major facilitator Superfamily
CLQ68_RS02855	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CLQ68_RS02870	COG3714	YhhN family
CLQ68_RS02880	COG3776	membrane
CLQ68_RS02885	COG0742	ribosomal rna small subunit methyltransferase
CLQ68_RS02890	COG0552	protein localization to endoplasmic reticulum
CLQ68_RS02895	COG2884	Cell division ATP-binding protein ftsE
CLQ68_RS02900	COG2177	Part of the ABC transporter FtsEX involved in
CLQ68_RS02915	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CLQ68_RS02925	COG0683	leucine binding
CLQ68_RS02940	COG0683	leucine binding
CLQ68_RS02945	COG0559	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS02995	COG0584	glycerophosphoryl diester phosphodiesterase
CLQ68_RS03005	COG0405	Gamma-glutamyltransferase
CLQ68_RS03010	COG1247	-acetyltransferase
CLQ68_RS03020	COG0673	inositol 2-dehydrogenase activity
CLQ68_RS03025	COG1741	Belongs to the pirin family
CLQ68_RS03030	COG1609	Transcriptional regulator
CLQ68_RS03035	COG3265	gluconokinase activity
CLQ68_RS03040	COG2610	gluconate transmembrane transporter activity
CLQ68_RS03050	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CLQ68_RS03075	COG0058	SHG alpha-glucan phosphorylase activity
CLQ68_RS03080	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CLQ68_RS03095	COG1349	DNA-binding transcription factor activity
CLQ68_RS03110	COG0058	SHG alpha-glucan phosphorylase activity
CLQ68_RS03115	COG1640	4-alpha-glucanotransferase
CLQ68_RS03120	COG2610	gluconate transmembrane transporter activity
CLQ68_RS03130	COG1040	competence protein
CLQ68_RS03155	COG1918	ferrous iron import across plasma membrane
CLQ68_RS03160	COG2183	response to ionizing radiation
CLQ68_RS03165	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CLQ68_RS03190	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CLQ68_RS03195	COG1011	Hydrolase
CLQ68_RS03205	COG0494	nUDIX hydrolase
CLQ68_RS03210	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CLQ68_RS03235	COG4796	Type ii and iii secretion system protein
CLQ68_RS03255	COG3266	domain, Protein
CLQ68_RS03260	COG0338	D12 class N6 adenine-specific DNA methyltransferase
CLQ68_RS03265	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CLQ68_RS03290	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CLQ68_RS03295	COG0402	S-adenosylhomocysteine deaminase activity
CLQ68_RS03300	COG0738	Major facilitator superfamily
CLQ68_RS03325	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CLQ68_RS03330	COG1289	transmembrane transporter activity
CLQ68_RS03345	COG1765	OsmC-like protein
CLQ68_RS03350	COG3954	Phosphoribulokinase
CLQ68_RS03360	COG0429	hydrolase of the alpha beta-hydrolase fold
CLQ68_RS03370	COG0488	(ABC) transporter
CLQ68_RS03385	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
CLQ68_RS03390	COG1047	Peptidyl-prolyl cis-trans
CLQ68_RS03400	COG0545	Peptidyl-prolyl cis-trans isomerase
CLQ68_RS03405	COG2964	Protein conserved in bacteria
CLQ68_RS03460	COG0051	transcription antitermination factor activity, RNA binding
CLQ68_RS03485	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CLQ68_RS03500	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CLQ68_RS03565	COG0201	protein transport
CLQ68_RS03580	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CLQ68_RS03590	COG0202	RNA polymerase activity
CLQ68_RS03605	COG0789	Transcriptional regulator
CLQ68_RS03610	COG3036	rescue of stalled ribosome
CLQ68_RS03640	COG0758	DNA mediated transformation
CLQ68_RS03650	COG0551	DNA topoisomerase type I activity
CLQ68_RS03670	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CLQ68_RS03705	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLQ68_RS03710	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLQ68_RS03715	COG1309	transcriptional regulator
CLQ68_RS03740	COG4145	pantothenate transmembrane transporter activity
CLQ68_RS03745	COG3924	membrane
CLQ68_RS03750	COG0439	Biotin carboxylase
CLQ68_RS03755	COG0511	ligase activity, forming carbon-carbon bonds
CLQ68_RS03780	COG2200	EAL domain
CLQ68_RS03780	COG2199	diguanylate cyclase activity
CLQ68_RS03785	COG1077	Cell shape determining protein MreB Mrl
CLQ68_RS03790	COG1792	Involved in formation and maintenance of cell shape
CLQ68_RS03795	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
CLQ68_RS03805	COG1530	ribonuclease E activity
CLQ68_RS03810	COG3164	Protein of unknown function
CLQ68_RS03815	COG0312	modulator of DNA gyrase
CLQ68_RS03820	COG0583	DNA-binding transcription factor activity
CLQ68_RS03835	COG1289	transmembrane transporter activity
CLQ68_RS03840	COG2732	(Barnase) inhibitor
CLQ68_RS03865	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CLQ68_RS03870	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CLQ68_RS03875	COG3105	Protein conserved in bacteria
CLQ68_RS03880	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CLQ68_RS03900	COG0625	glutathione transferase activity
CLQ68_RS03905	COG2969	positive regulation of protein catabolic process
CLQ68_RS03915	COG0493	'glutamate synthase
CLQ68_RS03920	COG0067	glutamate synthase
CLQ68_RS03920	COG0069	glutamate synthase activity
CLQ68_RS03920	COG0070	glutamate synthase
CLQ68_RS03925	COG1242	4 iron, 4 sulfur cluster binding
CLQ68_RS03930	COG2271	Major facilitator Superfamily
CLQ68_RS03935	COG1063	alcohol dehydrogenase
CLQ68_RS03940	COG1312	Catalyzes the dehydration of D-mannonate
CLQ68_RS03945	COG5002	protein histidine kinase activity
CLQ68_RS03945	COG2198	Histidine kinase
CLQ68_RS03945	COG0784	Response regulator, receiver
CLQ68_RS03950	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
CLQ68_RS03955	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CLQ68_RS03960	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS03970	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS03975	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CLQ68_RS03980	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CLQ68_RS03985	COG1137	ATPase activity
CLQ68_RS03990	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
CLQ68_RS03995	COG3117	lipopolysaccharide transmembrane transporter activity
CLQ68_RS04000	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CLQ68_RS04010	COG0530	calcium, potassium:sodium antiporter activity
CLQ68_RS04020	COG1127	ABC transporter
CLQ68_RS04025	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CLQ68_RS04030	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CLQ68_RS04035	COG2854	intermembrane phospholipid transfer
CLQ68_RS04040	COG3113	response to antibiotic
CLQ68_RS04045	COG5007	Belongs to the BolA IbaG family
CLQ68_RS04055	COG3423	Transcriptional regulator
CLQ68_RS04060	COG0142	geranyltranstransferase activity
CLQ68_RS04075	COG0697	spore germination
CLQ68_RS04085	COG2027	D-alanyl-D-alanine carboxypeptidase
CLQ68_RS04095	COG1534	Rna-binding protein
CLQ68_RS04110	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CLQ68_RS04115	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CLQ68_RS04125	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CLQ68_RS04165	COG0195	Participates in both transcription termination and antitermination
CLQ68_RS04215	COG0814	amino acid
CLQ68_RS04240	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
CLQ68_RS04285	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CLQ68_RS04290	COG0826	peptidase U32
CLQ68_RS04295	COG0826	peptidase U32
CLQ68_RS04300	COG3154	lipid carrier protein
CLQ68_RS04305	COG3153	acetyltransferase
CLQ68_RS04320	COG0693	protein deglycase activity
CLQ68_RS04325	COG0702	epimerase
CLQ68_RS04330	COG0701	Predicted permease
CLQ68_RS04335	COG2823	Periplasmic or secreted lipoprotein
CLQ68_RS04355	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CLQ68_RS04360	COG2721	sulfolactate sulfo-lyase activity
CLQ68_RS04365	COG2271	Major facilitator Superfamily
CLQ68_RS04375	COG2084	Dehydrogenase
CLQ68_RS04380	COG1929	Belongs to the glycerate kinase type-1 family
CLQ68_RS04400	COG1741	Belongs to the pirin family
CLQ68_RS04405	COG0583	DNA-binding transcription factor activity
CLQ68_RS04410	COG3152	Membrane
CLQ68_RS04415	COG0435	Glutathione S-transferase
CLQ68_RS04420	COG2259	Doxx family
CLQ68_RS04430	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
CLQ68_RS04435	COG4575	ribosome binding
CLQ68_RS04440	COG1422	Protein of unknown function (DUF1090)
CLQ68_RS04450	COG0586	Pfam SNARE associated Golgi protein
CLQ68_RS04460	COG2186	Transcriptional regulator
CLQ68_RS04465	COG2271	Major facilitator Superfamily
CLQ68_RS04475	COG2721	sulfolactate sulfo-lyase activity
CLQ68_RS04490	COG0861	Integral membrane protein TerC family
CLQ68_RS04495	COG0673	inositol 2-dehydrogenase activity
CLQ68_RS04500	COG1451	nucleotide metabolic process
CLQ68_RS04520	COG0446	pyridine nucleotide-disulphide oxidoreductase
CLQ68_RS04520	COG1902	pentaerythritol trinitrate reductase activity
CLQ68_RS04575	COG1695	Transcriptional regulator
CLQ68_RS04580	COG2375	cellular response to nickel ion
CLQ68_RS04595	COG1461	Dihydroxyacetone kinase
CLQ68_RS04600	COG2376	Dihydroxyacetone kinase
CLQ68_RS04675	COG3247	response to pH
CLQ68_RS04685	COG2198	Histidine kinase
CLQ68_RS04685	COG2205	protein histidine kinase activity
CLQ68_RS04685	COG0784	Response regulator, receiver
CLQ68_RS04685	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLQ68_RS04690	COG2197	response regulator
CLQ68_RS04730	COG4983	Phage plasmid primase, P4 family domain protein
CLQ68_RS04780	COG0210	DNA helicase
CLQ68_RS04800	COG3596	GTP binding
CLQ68_RS04810	COG2378	regulation of single-species biofilm formation
CLQ68_RS04815	COG3468	outer membrane autotransporter barrel domain protein
CLQ68_RS04830	COG2003	Belongs to the UPF0758 family
CLQ68_RS04865	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CLQ68_RS04870	COG0358	DNA primase activity
CLQ68_RS04875	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CLQ68_RS04935	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CLQ68_RS04950	COG4991	sh3 domain protein
CLQ68_RS04955	COG3025	triphosphatase activity
CLQ68_RS04975	COG2960	long-chain fatty acid transporting porin activity
CLQ68_RS04990	COG3384	dioxygenase
CLQ68_RS04995	COG0754	glutathionylspermidine amidase activity
CLQ68_RS05010	COG0494	nUDIX hydrolase
CLQ68_RS05015	COG3151	Protein conserved in bacteria
CLQ68_RS05020	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CLQ68_RS05025	COG3150	esterase
CLQ68_RS05035	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
CLQ68_RS05040	COG2249	NAD(P)H dehydrogenase (quinone) activity
CLQ68_RS05045	COG0642	Histidine kinase
CLQ68_RS05055	COG3111	PFAM Bacterial OB fold (BOF) protein
CLQ68_RS05060	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
CLQ68_RS05065	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CLQ68_RS05070	COG0204	Acyl-transferase
CLQ68_RS05075	COG2132	Multicopper oxidase
CLQ68_RS05080	COG1032	radical SAM domain protein
CLQ68_RS05090	COG0656	L-ascorbic acid biosynthetic process
CLQ68_RS05095	COG1979	alcohol dehydrogenase
CLQ68_RS05100	COG2207	Transcriptional regulator
CLQ68_RS05105	COG0586	Pfam SNARE associated Golgi protein
CLQ68_RS05110	COG0626	cystathionine gamma-synthase activity
CLQ68_RS05125	COG0848	biopolymer transport protein
CLQ68_RS05145	COG0625	glutathione transferase activity
CLQ68_RS05155	COG0754	glutathionylspermidine amidase activity
CLQ68_RS05160	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CLQ68_RS05180	COG0583	DNA-binding transcription factor activity
CLQ68_RS05185	COG0626	cystathionine gamma-synthase activity
CLQ68_RS05225	COG1811	Na channel or pump
CLQ68_RS05235	COG1982	Orn Lys Arg decarboxylase major
CLQ68_RS05240	COG2211	Major facilitator Superfamily
CLQ68_RS05255	COG1194	a g-specific adenine glycosylase
CLQ68_RS05265	COG3171	Protein conserved in bacteria
CLQ68_RS05275	COG4214	carbohydrate transport
CLQ68_RS05290	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CLQ68_RS05305	COG0762	integral membrane protein
CLQ68_RS05310	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CLQ68_RS05315	COG2805	Type II/IV secretion system protein
CLQ68_RS05335	COG0189	ligase activity
CLQ68_RS05340	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CLQ68_RS05345	COG2356	endonuclease I
CLQ68_RS05355	COG2814	Major facilitator Superfamily
CLQ68_RS05395	COG2146	nitrite reductase [NAD(P)H] activity
CLQ68_RS05410	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS05415	COG1414	Transcriptional regulator
CLQ68_RS05445	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS05450	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
CLQ68_RS05470	COG0501	Belongs to the peptidase M48B family
CLQ68_RS05475	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CLQ68_RS05490	COG0191	fructose-bisphosphate aldolase activity
CLQ68_RS05495	COG0668	transmembrane transport
CLQ68_RS05505	COG2968	Membrane
CLQ68_RS05520	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CLQ68_RS05525	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CLQ68_RS05545	COG0006	proline dipeptidase activity
CLQ68_RS05550	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CLQ68_RS05555	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CLQ68_RS05575	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS05580	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CLQ68_RS05600	COG2723	6-phospho-beta-galactosidase activity
CLQ68_RS05605	COG1737	Transcriptional regulator
CLQ68_RS05615	COG1272	protein, Hemolysin III
CLQ68_RS05625	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
CLQ68_RS05635	COG0716	FMN binding
CLQ68_RS05640	COG4974	Belongs to the 'phage' integrase family
CLQ68_RS05650	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CLQ68_RS05675	COG4942	peptidase
CLQ68_RS05685	COG2814	Major facilitator Superfamily
CLQ68_RS05700	COG0667	Aldo Keto reductase
CLQ68_RS05705	COG2249	NAD(P)H dehydrogenase (quinone) activity
CLQ68_RS05745	COG1393	Belongs to the ArsC family
CLQ68_RS05760	COG1538	Outer membrane efflux protein
CLQ68_RS05765	COG1289	transmembrane transporter activity
CLQ68_RS05780	COG3592	Divergent 4Fe-4S mono-cluster
CLQ68_RS05785	COG2388	GCN5-related N-acetyl-transferase
CLQ68_RS05795	COG3539	Fimbrial protein
CLQ68_RS05800	COG3539	Fimbrial protein
CLQ68_RS05805	COG3539	Fimbrial protein
CLQ68_RS05810	COG3188	usher protein
CLQ68_RS05815	COG3121	Chaperone
CLQ68_RS05820	COG3539	Fimbrial protein
CLQ68_RS05830	COG4974	Belongs to the 'phage' integrase family
CLQ68_RS05835	COG0582	viral genome integration into host DNA
CLQ68_RS05845	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
CLQ68_RS05850	COG1846	Transcriptional regulator
CLQ68_RS05855	COG0697	spore germination
CLQ68_RS05905	COG0667	Aldo Keto reductase
CLQ68_RS05910	COG0814	amino acid
CLQ68_RS05925	COG0183	Belongs to the thiolase family
CLQ68_RS05935	COG0823	Involved in the tonB-independent uptake of proteins
CLQ68_RS05940	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS05945	COG2814	Major facilitator Superfamily
CLQ68_RS05975	COG3842	ATPase activity
CLQ68_RS05980	COG0395	ABC-type sugar transport system, permease component
CLQ68_RS05985	COG1175	transmembrane transport
CLQ68_RS05990	COG1917	Cupin 2, conserved barrel domain protein
CLQ68_RS05995	COG1794	racemase activity, acting on amino acids and derivatives
CLQ68_RS06000	COG0583	DNA-binding transcription factor activity
CLQ68_RS06010	COG1609	Transcriptional regulator
CLQ68_RS06015	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS06020	COG2723	6-phospho-beta-galactosidase activity
CLQ68_RS06025	COG2186	Transcriptional regulator
CLQ68_RS06035	COG1609	Transcriptional regulator
CLQ68_RS06060	COG0667	Aldo Keto reductase
CLQ68_RS06070	COG0861	Integral membrane protein TerC family
CLQ68_RS06105	COG4795	General secretion pathway protein
CLQ68_RS06115	COG4967	type IV pilus modification protein PilV
CLQ68_RS06120	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
CLQ68_RS06125	COG1025	Belongs to the peptidase M16 family
CLQ68_RS06130	COG1074	ATP-dependent DNA helicase activity
CLQ68_RS06135	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CLQ68_RS06145	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
CLQ68_RS06145	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
CLQ68_RS06150	COG0860	N-Acetylmuramoyl-L-alanine amidase
CLQ68_RS06155	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CLQ68_RS06185	COG4656	Part of a membrane complex involved in electron transport
CLQ68_RS06190	COG1454	alcohol dehydrogenase
CLQ68_RS06190	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS06220	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
CLQ68_RS06385	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
CLQ68_RS06390	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CLQ68_RS06395	COG2166	iron-sulfur cluster assembly
CLQ68_RS06400	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CLQ68_RS06410	COG0583	DNA-binding transcription factor activity
CLQ68_RS06415	COG2363	Small membrane protein
CLQ68_RS06425	COG1349	DNA-binding transcription factor activity
CLQ68_RS06445	COG0738	Major facilitator superfamily
CLQ68_RS06450	COG0235	Class ii aldolase
CLQ68_RS06455	COG1454	alcohol dehydrogenase
CLQ68_RS06470	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CLQ68_RS06485	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CLQ68_RS06490	COG2011	ABC-type metal ion transport system permease component
CLQ68_RS06495	COG1464	Belongs to the NlpA lipoprotein family
CLQ68_RS06505	COG0477	Major facilitator Superfamily
CLQ68_RS06515	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CLQ68_RS06520	COG1760	l-serine dehydratase
CLQ68_RS06525	COG0814	amino acid
CLQ68_RS06530	COG1611	Belongs to the LOG family
CLQ68_RS06545	COG3098	single-species biofilm formation
CLQ68_RS06550	COG0564	pseudouridine synthase activity
CLQ68_RS06555	COG0716	FMN binding
CLQ68_RS06560	COG2271	Major facilitator Superfamily
CLQ68_RS06565	COG4948	Mandelate Racemase Muconate Lactonizing
CLQ68_RS06570	COG4948	Mandelate Racemase Muconate Lactonizing
CLQ68_RS06575	COG1929	Belongs to the glycerate kinase type-1 family
CLQ68_RS06585	COG3437	response regulator, receiver
CLQ68_RS06585	COG3850	Histidine kinase
CLQ68_RS06585	COG4999	Histidine kinase
CLQ68_RS06585	COG2205	protein histidine kinase activity
CLQ68_RS06595	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CLQ68_RS06600	COG3956	TIGRFAM MazG family protein
CLQ68_RS06620	COG0602	queuosine metabolic process
CLQ68_RS06625	COG0720	synthase
CLQ68_RS06645	COG2234	aminopeptidase activity
CLQ68_RS06705	COG4942	peptidase
CLQ68_RS06705	COG1388	LysM domain
CLQ68_RS06710	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CLQ68_RS06735	COG0163	prenyltransferase activity
CLQ68_RS06740	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CLQ68_RS06795	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS06800	COG4558	Periplasmic binding protein
CLQ68_RS06805	COG3720	iron ion transport
CLQ68_RS06825	COG0679	Auxin Efflux Carrier
CLQ68_RS06840	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CLQ68_RS06845	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CLQ68_RS06850	COG1121	(ABC) transporter
CLQ68_RS06860	COG1609	Transcriptional regulator
CLQ68_RS06865	COG1940	carbohydrate kinase activity
CLQ68_RS06870	COG1447	Phosphotransferase system cellobiose-specific component IIA
CLQ68_RS06875	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS06880	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS06885	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS06895	COG4580	involved in the transport of maltose and maltodextrins
CLQ68_RS06905	COG2723	6-phospho-beta-galactosidase activity
CLQ68_RS06915	COG0309	Hydrogenase expression formation protein (HypE)
CLQ68_RS06920	COG0409	Hydrogenase expression formation protein
CLQ68_RS06925	COG0298	carbon dioxide binding
CLQ68_RS06930	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
CLQ68_RS06950	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CLQ68_RS06955	COG0651	ATP synthesis coupled electron transport
CLQ68_RS06960	COG0650	Formate hydrogenlyase subunit 4
CLQ68_RS06965	COG3261	NADH dehydrogenase
CLQ68_RS06965	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
CLQ68_RS06970	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLQ68_RS06975	COG3260	NADH ubiquinone oxidoreductase 20
CLQ68_RS06985	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
CLQ68_RS06995	COG2723	6-phospho-beta-galactosidase activity
CLQ68_RS07000	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CLQ68_RS07000	COG1263	PTS System
CLQ68_RS07005	COG1609	Transcriptional regulator
CLQ68_RS07010	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CLQ68_RS07015	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
CLQ68_RS07020	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
CLQ68_RS07050	COG1349	DNA-binding transcription factor activity
CLQ68_RS07055	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS07060	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS07070	COG3732	PTS system glucitol sorbitol-specific
CLQ68_RS07075	COG3730	PTS system glucitol sorbitol-specific
CLQ68_RS07080	COG2951	lytic endotransglycosylase activity
CLQ68_RS07090	COG1121	(ABC) transporter
CLQ68_RS07095	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CLQ68_RS07105	COG1546	Belongs to the CinA family
CLQ68_RS07130	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
CLQ68_RS07160	COG2823	Periplasmic or secreted lipoprotein
CLQ68_RS07165	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CLQ68_RS07170	COG1238	metal cluster binding
CLQ68_RS07190	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CLQ68_RS07195	COG2814	Major facilitator Superfamily
CLQ68_RS07200	COG1566	PFAM secretion protein HlyD family protein
CLQ68_RS07205	COG1846	Transcriptional regulator
CLQ68_RS07215	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
CLQ68_RS07225	COG4176	ABC-type proline glycine betaine transport system permease component
CLQ68_RS07240	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CLQ68_RS07250	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CLQ68_RS07255	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CLQ68_RS07260	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CLQ68_RS07265	COG4575	ribosome binding
CLQ68_RS07290	COG2916	Histone family protein nucleoid-structuring protein H-NS
CLQ68_RS07305	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CLQ68_RS07310	COG0640	Transcriptional regulator
CLQ68_RS07320	COG0583	DNA-binding transcription factor activity
CLQ68_RS07325	COG3284	Transcriptional regulator
CLQ68_RS07335	COG3539	Fimbrial protein
CLQ68_RS07340	COG3121	Chaperone
CLQ68_RS07355	COG3121	Chaperone
CLQ68_RS07375	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS07385	COG0235	Class ii aldolase
CLQ68_RS07395	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLQ68_RS07430	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLQ68_RS07435	COG2207	Transcriptional regulator
CLQ68_RS07435	COG3708	Transcriptional regulator
CLQ68_RS07510	COG0582	viral genome integration into host DNA
CLQ68_RS07525	COG2867	negative regulation of translational initiation
CLQ68_RS07540	COG0497	DNA recombination
CLQ68_RS07560	COG4536	flavin adenine dinucleotide binding
CLQ68_RS07565	COG4137	Cytochrome C assembly protein
CLQ68_RS07570	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CLQ68_RS07605	COG2885	chlorophyll binding
CLQ68_RS07610	COG2199	diguanylate cyclase activity
CLQ68_RS07620	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CLQ68_RS07625	COG0287	Prephenate dehydrogenase
CLQ68_RS07625	COG1605	Chorismate mutase
CLQ68_RS07635	COG1605	Chorismate mutase
CLQ68_RS07635	COG0077	Prephenate dehydratase
CLQ68_RS07645	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CLQ68_RS07650	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CLQ68_RS07665	COG0542	response to heat
CLQ68_RS07690	COG0477	Major facilitator Superfamily
CLQ68_RS07695	COG5544	Lipoprotein
CLQ68_RS07700	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CLQ68_RS07710	COG3148	PFAM DTW domain containing protein
CLQ68_RS07715	COG3118	belongs to the thioredoxin family
CLQ68_RS07720	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CLQ68_RS07735	COG0513	Belongs to the DEAD box helicase family
CLQ68_RS07745	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
CLQ68_RS07755	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
CLQ68_RS07760	COG3026	antisigma factor binding
CLQ68_RS07765	COG3086	response to oxidative stress
CLQ68_RS07775	COG0681	Belongs to the peptidase S26 family
CLQ68_RS07795	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
CLQ68_RS07805	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CLQ68_RS07810	COG1737	Transcriptional regulator
CLQ68_RS07815	COG0560	Phosphoserine phosphatase
CLQ68_RS07830	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CLQ68_RS07830	COG0047	phosphoribosylformylglycinamidine synthase activity
CLQ68_RS07835	COG2205	protein histidine kinase activity
CLQ68_RS07840	COG3170	Tfp pilus assembly protein FimV
CLQ68_RS07845	COG2204	response regulator
CLQ68_RS07850	COG0347	Belongs to the P(II) protein family
CLQ68_RS07855	COG1017	nitric oxide dioxygenase activity
CLQ68_RS07855	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CLQ68_RS07870	COG2259	Doxx family
CLQ68_RS07875	COG1940	carbohydrate kinase activity
CLQ68_RS07880	COG0457	Tetratricopeptide repeat
CLQ68_RS07885	COG2814	Major facilitator Superfamily
CLQ68_RS07885	COG0477	Major facilitator Superfamily
CLQ68_RS07890	COG2017	converts alpha-aldose to the beta-anomer
CLQ68_RS07895	COG2814	Major facilitator Superfamily
CLQ68_RS07900	COG3711	transcriptional antiterminator
CLQ68_RS07905	COG3683	transport system, periplasmic component
CLQ68_RS07910	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
CLQ68_RS07940	COG0822	iron-sulfur transferase activity
CLQ68_RS07960	COG0633	Ferredoxin
CLQ68_RS07965	COG2975	iron-sulfur cluster assembly
CLQ68_RS07985	COG2897	thiosulfate sulfurtransferase activity
CLQ68_RS07990	COG2373	Large extracellular alpha-helical protein
CLQ68_RS07995	COG4953	penicillin-binding protein 1C
CLQ68_RS08030	COG2976	Protein conserved in bacteria
CLQ68_RS08050	COG1645	bacterial-type flagellum-dependent swarming motility
CLQ68_RS08060	COG0516	GMP reductase activity
CLQ68_RS08060	COG0517	IMP dehydrogenase activity
CLQ68_RS08105	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CLQ68_RS08200	COG5484	DNA packaging
CLQ68_RS08200	COG3728	DNA packaging
CLQ68_RS08350	COG3179	chitinase
CLQ68_RS08360	COG3119	arylsulfatase activity
CLQ68_RS08365	COG0641	radical SAM
CLQ68_RS08400	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CLQ68_RS08415	COG2723	6-phospho-beta-galactosidase activity
CLQ68_RS08425	COG2233	PERMEase
CLQ68_RS08440	COG1393	Belongs to the ArsC family
CLQ68_RS08445	COG4783	chaperone-mediated protein folding
CLQ68_RS08450	COG0628	permease
CLQ68_RS08455	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CLQ68_RS08460	COG2716	regulation of RNA biosynthetic process
CLQ68_RS08470	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
CLQ68_RS08480	COG2321	neutral zinc metallopeptidase
CLQ68_RS08485	COG1444	tRNA N-acetyltransferase activity
CLQ68_RS08490	COG0400	carboxylic ester hydrolase activity
CLQ68_RS08505	COG1393	Belongs to the ArsC family
CLQ68_RS08515	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLQ68_RS08525	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CLQ68_RS08525	COG0493	'glutamate synthase
CLQ68_RS08535	COG5342	invasion associated locus B
CLQ68_RS08540	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CLQ68_RS08545	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CLQ68_RS08555	COG4810	utilization protein
CLQ68_RS08645	COG0860	N-Acetylmuramoyl-L-alanine amidase
CLQ68_RS08665	COG2837	iron assimilation
CLQ68_RS08675	COG4150	thiosulfate binding
CLQ68_RS08680	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CLQ68_RS08685	COG4208	sulfate ABC transporter
CLQ68_RS08690	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
CLQ68_RS08700	COG4319	ketosteroid isomerase
CLQ68_RS08735	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CLQ68_RS08755	COG3530	Putative quorum-sensing-regulated virulence factor
CLQ68_RS08760	COG0385	Bile acid
CLQ68_RS08765	COG0583	DNA-binding transcription factor activity
CLQ68_RS08800	COG3415	Transposase
CLQ68_RS08805	COG3415	Transposase
CLQ68_RS08820	COG2200	EAL domain
CLQ68_RS08820	COG2199	diguanylate cyclase activity
CLQ68_RS08825	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CLQ68_RS08840	COG0667	Aldo Keto reductase
CLQ68_RS08845	COG3961	Belongs to the TPP enzyme family
CLQ68_RS08860	COG3279	Response regulator of the LytR AlgR family
CLQ68_RS08865	COG3275	phosphorelay sensor kinase activity
CLQ68_RS08875	COG0436	Aminotransferase
CLQ68_RS08885	COG2807	transmembrane transport
CLQ68_RS08890	COG0590	tRNA wobble adenosine to inosine editing
CLQ68_RS08895	COG0583	DNA-binding transcription factor activity
CLQ68_RS08915	COG2116	formate transmembrane transporter activity
CLQ68_RS08920	COG2853	Lipoprotein
CLQ68_RS08930	COG3691	Protein conserved in bacteria
CLQ68_RS08945	COG2062	phosphohistidine phosphatase, SixA
CLQ68_RS08970	COG0730	response to heat
CLQ68_RS08975	COG3101	peptidyl-lysine hydroxylation
CLQ68_RS08990	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CLQ68_RS09010	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CLQ68_RS09020	COG0586	Pfam SNARE associated Golgi protein
CLQ68_RS09030	COG0285	dihydrofolate synthase activity
CLQ68_RS09035	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
CLQ68_RS09040	COG1286	toxin biosynthetic process
CLQ68_RS09045	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CLQ68_RS09050	COG0163	prenyltransferase activity
CLQ68_RS09070	COG4160	amino acid transport
CLQ68_RS09075	COG4598	ABC transporter
CLQ68_RS09085	COG1090	epimerase
CLQ68_RS09090	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CLQ68_RS09095	COG0625	glutathione transferase activity
CLQ68_RS09100	COG0625	glutathione transferase activity
CLQ68_RS09105	COG0622	Phosphoesterase
CLQ68_RS09110	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
CLQ68_RS09115	COG0280	phosphate acetyltransferase
CLQ68_RS09115	COG0857	belongs to the CobB CobQ family
CLQ68_RS09135	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CLQ68_RS09140	COG0490	domain, Protein
CLQ68_RS09140	COG0471	metal ion transport
CLQ68_RS09150	COG0436	Aminotransferase
CLQ68_RS09210	COG0839	Belongs to the complex I subunit 6 family
CLQ68_RS09220	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CLQ68_RS09225	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLQ68_RS09240	COG2153	protein acetylation
CLQ68_RS09245	COG1169	isochorismate synthase
CLQ68_RS09270	COG0318	PFAM AMP-dependent synthetase and ligase
CLQ68_RS09280	COG5464	transposase or invertase
CLQ68_RS09295	COG1414	Transcriptional regulator
CLQ68_RS09305	COG2271	Major facilitator Superfamily
CLQ68_RS09315	COG0247	lactate metabolic process
CLQ68_RS09325	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CLQ68_RS09330	COG2271	Major facilitator Superfamily
CLQ68_RS09335	COG0584	glycerophosphoryl diester phosphodiesterase
CLQ68_RS09345	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CLQ68_RS09375	COG0784	Response regulator, receiver
CLQ68_RS09375	COG2205	protein histidine kinase activity
CLQ68_RS09385	COG2198	Histidine kinase
CLQ68_RS09385	COG0642	Histidine kinase
CLQ68_RS09400	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CLQ68_RS09400	COG2169	Transcriptional regulator
CLQ68_RS09405	COG3145	DNA-N1-methyladenine dioxygenase activity
CLQ68_RS09410	COG4615	Cyclic peptide transporter
CLQ68_RS09415	COG2239	Acts as a magnesium transporter
CLQ68_RS09420	COG0659	secondary active sulfate transmembrane transporter activity
CLQ68_RS09435	COG0628	permease
CLQ68_RS09490	COG0582	viral genome integration into host DNA
CLQ68_RS09515	COG1349	DNA-binding transcription factor activity
CLQ68_RS09520	COG0494	nUDIX hydrolase
CLQ68_RS09540	COG1061	Type III restriction enzyme res subunit
CLQ68_RS09545	COG1187	pseudouridine synthase activity
CLQ68_RS09550	COG2814	Major facilitator Superfamily
CLQ68_RS09560	COG4172	Belongs to the ABC transporter superfamily
CLQ68_RS09565	COG4239	(ABC) transporter, permease
CLQ68_RS09570	COG4174	ABC transporter (Permease)
CLQ68_RS09575	COG4166	transmembrane transport
CLQ68_RS09580	COG2200	EAL domain
CLQ68_RS09585	COG0791	NLP P60 protein
CLQ68_RS09590	COG0671	phosphoesterase, PA-phosphatase related
CLQ68_RS09595	COG0523	cobalamin synthesis protein
CLQ68_RS09600	COG0246	Mannitol dehydrogenase
CLQ68_RS09605	COG1312	Catalyzes the dehydration of D-mannonate
CLQ68_RS09630	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS09630	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS09635	COG1105	Belongs to the carbohydrate kinase PfkB family
CLQ68_RS09640	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CLQ68_RS09640	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CLQ68_RS09640	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
CLQ68_RS09650	COG2855	membrane
CLQ68_RS09660	COG0583	DNA-binding transcription factor activity
CLQ68_RS09665	COG0833	amino acid
CLQ68_RS09675	COG4771	TonB-dependent receptor
CLQ68_RS09690	COG2311	Membrane
CLQ68_RS09705	COG1129	ABC transporter
CLQ68_RS09715	COG2949	membrane
CLQ68_RS09730	COG1346	cytolysis
CLQ68_RS09740	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CLQ68_RS09745	COG3659	wide pore channel activity
CLQ68_RS09760	COG2723	6-phospho-beta-galactosidase activity
CLQ68_RS09765	COG1538	Outer membrane efflux protein
CLQ68_RS09770	COG0586	Pfam SNARE associated Golgi protein
CLQ68_RS09780	COG1686	Belongs to the peptidase S11 family
CLQ68_RS09790	COG0277	FAD linked oxidase domain protein
CLQ68_RS09795	COG1472	Belongs to the glycosyl hydrolase 3 family
CLQ68_RS09800	COG1732	Glycine betaine
CLQ68_RS09805	COG1174	glycine betaine transport
CLQ68_RS09810	COG1125	glycine betaine transport
CLQ68_RS09815	COG1174	glycine betaine transport
CLQ68_RS09825	COG3275	phosphorelay sensor kinase activity
CLQ68_RS09835	COG4807	Protein conserved in bacteria
CLQ68_RS09855	COG5455	response to cobalt ion
CLQ68_RS09860	COG0583	DNA-binding transcription factor activity
CLQ68_RS09865	COG2252	PERMEase
CLQ68_RS09875	COG0583	DNA-binding transcription factor activity
CLQ68_RS09890	COG0351	phosphomethylpyrimidine kinase
CLQ68_RS09895	COG1830	Aldolase
CLQ68_RS09905	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CLQ68_RS09930	COG1070	Carbohydrate kinase
CLQ68_RS09940	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CLQ68_RS09945	COG4948	Mandelate Racemase Muconate Lactonizing
CLQ68_RS09950	COG0747	negative chemotaxis
CLQ68_RS09955	COG0601	transmembrane transport
CLQ68_RS09960	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLQ68_RS09965	COG0444	Belongs to the ABC transporter superfamily
CLQ68_RS09970	COG4608	Belongs to the ABC transporter superfamily
CLQ68_RS09980	COG0826	peptidase U32
CLQ68_RS09985	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS09990	COG2205	protein histidine kinase activity
CLQ68_RS10015	COG1301	dicarboxylic acid transport
CLQ68_RS10030	COG5002	protein histidine kinase activity
CLQ68_RS10035	COG0443	Heat shock 70 kDa protein
CLQ68_RS10040	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CLQ68_RS10055	COG2982	Protein involved in outer membrane biogenesis
CLQ68_RS10060	COG1253	flavin adenine dinucleotide binding
CLQ68_RS10105	COG0463	Glycosyl transferase, family 2
CLQ68_RS10130	COG1088	dTDP-glucose 4,6-dehydratase activity
CLQ68_RS10160	COG3039	Transposase
CLQ68_RS10190	COG0438	transferase activity, transferring glycosyl groups
CLQ68_RS10195	COG1216	Glycosyl transferase, family 2
CLQ68_RS10195	COG1442	glycosyl transferase family 8
CLQ68_RS10205	COG0463	Glycosyl transferase, family 2
CLQ68_RS10230	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CLQ68_RS10260	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CLQ68_RS10265	COG0583	DNA-binding transcription factor activity
CLQ68_RS10275	COG0531	amino acid
CLQ68_RS10280	COG0640	Transcriptional regulator
CLQ68_RS10285	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CLQ68_RS10290	COG2925	Exonuclease
CLQ68_RS10305	COG1289	transmembrane transporter activity
CLQ68_RS10325	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
CLQ68_RS10335	COG1942	4-Oxalocrotonate Tautomerase
CLQ68_RS10340	COG0583	DNA-binding transcription factor activity
CLQ68_RS10345	COG0095	Lipoate-protein ligase
CLQ68_RS10350	COG0477	Major facilitator Superfamily
CLQ68_RS10365	COG5001	Diguanylate cyclase
CLQ68_RS10365	COG3300	MHYT domain
CLQ68_RS10370	COG3615	Tellurite resistance protein tehB
CLQ68_RS10395	COG3706	GGDEF domain
CLQ68_RS10415	COG0534	Mate efflux family protein
CLQ68_RS10425	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CLQ68_RS10445	COG0604	alcohol dehydrogenase
CLQ68_RS10450	COG1309	transcriptional regulator
CLQ68_RS10455	COG0025	NhaP-type Na H and K H
CLQ68_RS10500	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CLQ68_RS10515	COG1418	mRNA catabolic process
CLQ68_RS10520	COG0270	DNA (cytosine-5-)-methyltransferase activity
CLQ68_RS10525	COG3727	T/G mismatch-specific endonuclease activity
CLQ68_RS10530	COG0697	spore germination
CLQ68_RS10535	COG2354	Protein conserved in bacteria
CLQ68_RS10565	COG0366	Alpha amylase catalytic
CLQ68_RS10570	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLQ68_RS10580	COG0765	amino acid transport
CLQ68_RS10585	COG1126	abc transporter atp-binding protein
CLQ68_RS10590	COG2197	response regulator
CLQ68_RS10600	COG2197	response regulator
CLQ68_RS10640	COG3012	SEC-C Motif Domain Protein
CLQ68_RS10640	COG3318	Belongs to the UPF0149 family
CLQ68_RS10645	COG0814	amino acid
CLQ68_RS10655	COG1528	Iron-storage protein
CLQ68_RS10670	COG0477	Major facilitator Superfamily
CLQ68_RS10680	COG2211	Major facilitator Superfamily
CLQ68_RS10690	COG1528	Iron-storage protein
CLQ68_RS10700	COG1879	ABC-type sugar transport system periplasmic component
CLQ68_RS10710	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS10735	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
CLQ68_RS10745	COG3102	Protein conserved in bacteria
CLQ68_RS10765	COG3788	relative of glutathione S-transferase, MAPEG superfamily
CLQ68_RS10770	COG1801	Protein of unknown function DUF72
CLQ68_RS10775	COG0582	viral genome integration into host DNA
CLQ68_RS10840	COG1846	Transcriptional regulator
CLQ68_RS10885	COG4725	Belongs to the MT-A70-like family
CLQ68_RS10900	COG3772	lysozyme
CLQ68_RS10930	COG4626	Terminase
CLQ68_RS10930	COG1802	Transcriptional regulator
CLQ68_RS10940	COG4695	Portal protein
CLQ68_RS11050	COG1335	isochorismatase
CLQ68_RS11060	COG0494	nUDIX hydrolase
CLQ68_RS11085	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CLQ68_RS11095	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
CLQ68_RS11100	COG0739	heme binding
CLQ68_RS11105	COG1560	Kdo2-lipid A biosynthetic process
CLQ68_RS11115	COG1737	Transcriptional regulator
CLQ68_RS11130	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CLQ68_RS11135	COG0129	dihydroxy-acid dehydratase activity
CLQ68_RS11140	COG0800	Aldolase
CLQ68_RS11150	COG3141	response to X-ray
CLQ68_RS11155	COG2979	Protein of unknown function (DUF533)
CLQ68_RS11160	COG1770	oligopeptidase
CLQ68_RS11165	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CLQ68_RS11175	COG2372	response to copper ion
CLQ68_RS11180	COG1276	copper resistance
CLQ68_RS11195	COG2990	Protein conserved in bacteria
CLQ68_RS11220	COG3008	intermembrane lipid transfer
CLQ68_RS11225	COG2995	paraquat-inducible protein a
CLQ68_RS11230	COG1956	GAF domain-containing protein
CLQ68_RS11250	COG2814	Major facilitator Superfamily
CLQ68_RS11260	COG1414	Transcriptional regulator
CLQ68_RS11300	COG0768	penicillin binding
CLQ68_RS11305	COG2226	methyltransferase
CLQ68_RS11320	COG3716	PTS system mannose fructose sorbose family IID component
CLQ68_RS11325	COG3715	PTS system
CLQ68_RS11330	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS11330	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CLQ68_RS11335	COG1253	flavin adenine dinucleotide binding
CLQ68_RS11340	COG2200	EAL domain
CLQ68_RS11345	COG1760	l-serine dehydratase
CLQ68_RS11365	COG0251	oxidation-reduction process
CLQ68_RS11370	COG1199	ATP-dependent helicase activity
CLQ68_RS11380	COG3065	identical protein binding
CLQ68_RS11390	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
CLQ68_RS11400	COG2894	cell division
CLQ68_RS11415	COG0179	Fumarylacetoacetate (FAA) hydrolase
CLQ68_RS11445	COG2719	SpoVR family
CLQ68_RS11465	COG1619	proteins homologs of microcin C7 resistance protein MccF
CLQ68_RS11475	COG4774	siderophore transport
CLQ68_RS11490	COG2308	Evidence 4 Homologs of previously reported genes of
CLQ68_RS11535	COG0583	DNA-binding transcription factor activity
CLQ68_RS11540	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CLQ68_RS11555	COG1882	Formate acetyltransferase
CLQ68_RS11585	COG0583	DNA-binding transcription factor activity
CLQ68_RS11615	COG0583	DNA-binding transcription factor activity
CLQ68_RS11630	COG3122	Protein conserved in bacteria
CLQ68_RS11660	COG2885	chlorophyll binding
CLQ68_RS11735	COG1262	PFAM Formylglycine-generating sulfatase enzyme
CLQ68_RS11800	COG0012	GTP binding
CLQ68_RS11820	COG0659	secondary active sulfate transmembrane transporter activity
CLQ68_RS11850	COG2890	protein-(glutamine-N5) methyltransferase activity
CLQ68_RS11870	COG0387	Pfam Sodium calcium exchanger
CLQ68_RS11875	COG4572	Cation transport regulator
CLQ68_RS11880	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
CLQ68_RS11890	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
CLQ68_RS11895	COG3707	response regulator
CLQ68_RS11900	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CLQ68_RS11910	COG1116	anion transmembrane transporter activity
CLQ68_RS11915	COG2146	nitrite reductase [NAD(P)H] activity
CLQ68_RS11915	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CLQ68_RS11920	COG0243	molybdopterin cofactor binding
CLQ68_RS11925	COG4932	domain protein
CLQ68_RS11930	COG2197	response regulator
CLQ68_RS11935	COG3850	Histidine kinase
CLQ68_RS11940	COG2223	nitrite transmembrane transporter activity
CLQ68_RS11945	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CLQ68_RS11950	COG1140	nitrate reductase beta subunit
CLQ68_RS11955	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CLQ68_RS11960	COG2181	nitrate reductase activity
CLQ68_RS11970	COG1522	sequence-specific DNA binding
CLQ68_RS11995	COG0788	formyltetrahydrofolate deformylase activity
CLQ68_RS12005	COG1752	Esterase of the alpha-beta hydrolase superfamily
CLQ68_RS12010	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS12015	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CLQ68_RS12020	COG2916	Histone family protein nucleoid-structuring protein H-NS
CLQ68_RS12025	COG1435	thymidine kinase activity
CLQ68_RS12030	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS12030	COG1454	alcohol dehydrogenase
CLQ68_RS12040	COG2095	MarC family integral membrane protein
CLQ68_RS12045	COG4166	transmembrane transport
CLQ68_RS12050	COG0601	transmembrane transport
CLQ68_RS12055	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLQ68_RS12060	COG0444	Belongs to the ABC transporter superfamily
CLQ68_RS12070	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CLQ68_RS12090	COG2353	YceI-like domain
CLQ68_RS12100	COG2350	Protein conserved in bacteria
CLQ68_RS12110	COG3001	Fructosamine kinase
CLQ68_RS12120	COG1105	Belongs to the carbohydrate kinase PfkB family
CLQ68_RS12125	COG3137	Salt-induced outer membrane protein
CLQ68_RS12170	COG0072	phenylalanine-tRNA ligase activity
CLQ68_RS12170	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CLQ68_RS12190	COG0583	DNA-binding transcription factor activity
CLQ68_RS12210	COG0386	Belongs to the glutathione peroxidase family
CLQ68_RS12220	COG0791	NLP P60 protein
CLQ68_RS12230	COG4256	Hemin uptake protein
CLQ68_RS12235	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CLQ68_RS12245	COG0574	Belongs to the PEP-utilizing enzyme family
CLQ68_RS12245	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CLQ68_RS12255	COG0628	permease
CLQ68_RS12260	COG0277	FAD linked oxidase domain protein
CLQ68_RS12260	COG0247	lactate metabolic process
CLQ68_RS12265	COG2050	protein possibly involved in aromatic compounds catabolism
CLQ68_RS12270	COG2261	transglycosylase associated protein
CLQ68_RS12310	COG1120	ATPase activity
CLQ68_RS12315	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS12325	COG0583	DNA-binding transcription factor activity
CLQ68_RS12350	COG1304	FMN binding
CLQ68_RS12355	COG1309	transcriptional regulator
CLQ68_RS12370	COG0316	Belongs to the HesB IscA family
CLQ68_RS12375	COG0719	Fe-S assembly protein
CLQ68_RS12380	COG0396	ATPase activity
CLQ68_RS12385	COG0719	Fe-S assembly protein
CLQ68_RS12400	COG1376	ErfK ybiS ycfS ynhG family protein
CLQ68_RS12425	COG1309	transcriptional regulator
CLQ68_RS12430	COG3185	4-Hydroxyphenylpyruvate dioxygenase
CLQ68_RS12430	COG1082	Xylose isomerase domain protein TIM barrel
CLQ68_RS12435	COG2271	Major facilitator Superfamily
CLQ68_RS12440	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CLQ68_RS12450	COG1120	ATPase activity
CLQ68_RS12455	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS12460	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CLQ68_RS12465	COG1414	Transcriptional regulator
CLQ68_RS12500	COG2814	Major facilitator Superfamily
CLQ68_RS12520	COG0583	DNA-binding transcription factor activity
CLQ68_RS12525	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CLQ68_RS12545	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLQ68_RS12550	COG1116	anion transmembrane transporter activity
CLQ68_RS12555	COG4774	siderophore transport
CLQ68_RS12560	COG1120	ATPase activity
CLQ68_RS12565	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS12570	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS12590	COG0765	amino acid transport
CLQ68_RS12595	COG1126	abc transporter atp-binding protein
CLQ68_RS12625	COG1473	amidohydrolase
CLQ68_RS12630	COG3383	formate dehydrogenase (NAD+) activity
CLQ68_RS12635	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CLQ68_RS12650	COG1175	transmembrane transport
CLQ68_RS12680	COG4133	protoheme IX ABC transporter activity
CLQ68_RS12685	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CLQ68_RS12690	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CLQ68_RS12705	COG1138	Cytochrome C-type biogenesis protein
CLQ68_RS12710	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CLQ68_RS12715	COG4235	cytochrome complex assembly
CLQ68_RS12715	COG3088	subunit of a heme lyase
CLQ68_RS12735	COG3850	Histidine kinase
CLQ68_RS12735	COG5002	protein histidine kinase activity
CLQ68_RS12740	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS12760	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLQ68_RS12795	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS12800	COG2610	gluconate transmembrane transporter activity
CLQ68_RS12805	COG1250	3-hydroxyacyl-CoA dehydrogenase
CLQ68_RS12815	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CLQ68_RS12825	COG0583	DNA-binding transcription factor activity
CLQ68_RS12855	COG2814	Major facilitator Superfamily
CLQ68_RS12870	COG0277	FAD linked oxidase domain protein
CLQ68_RS12875	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLQ68_RS12900	COG0402	S-adenosylhomocysteine deaminase activity
CLQ68_RS12960	COG4608	Belongs to the ABC transporter superfamily
CLQ68_RS12965	COG0444	Belongs to the ABC transporter superfamily
CLQ68_RS12990	COG0346	lactoylglutathione lyase activity
CLQ68_RS12995	COG1349	DNA-binding transcription factor activity
CLQ68_RS13025	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
CLQ68_RS13045	COG0300	oxidoreductase activity
CLQ68_RS13100	COG0307	riboflavin synthase, alpha
CLQ68_RS13105	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CLQ68_RS13110	COG2814	Major facilitator Superfamily
CLQ68_RS13115	COG0583	DNA-binding transcription factor activity
CLQ68_RS13130	COG2814	Major facilitator Superfamily
CLQ68_RS13145	COG0791	NLP P60 protein
CLQ68_RS13150	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CLQ68_RS13160	COG0346	lactoylglutathione lyase activity
CLQ68_RS13165	COG1902	pentaerythritol trinitrate reductase activity
CLQ68_RS13170	COG1309	transcriptional regulator
CLQ68_RS13175	COG3313	Fe-S protein
CLQ68_RS13180	COG4989	oxidoreductase activity
CLQ68_RS13185	COG2032	superoxide dismutase activity
CLQ68_RS13190	COG1289	transmembrane transporter activity
CLQ68_RS13195	COG1566	PFAM secretion protein HlyD family protein
CLQ68_RS13210	COG3706	GGDEF domain
CLQ68_RS13225	COG3895	Periplasmic Protein
CLQ68_RS13240	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
CLQ68_RS13245	COG0625	glutathione transferase activity
CLQ68_RS13260	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CLQ68_RS13270	COG4659	FMN binding
CLQ68_RS13305	COG2723	6-phospho-beta-galactosidase activity
CLQ68_RS13315	COG0673	inositol 2-dehydrogenase activity
CLQ68_RS13325	COG2814	Major facilitator Superfamily
CLQ68_RS13345	COG3038	cytochrome b561
CLQ68_RS13365	COG0583	DNA-binding transcription factor activity
CLQ68_RS13370	COG3485	protocatechuate 3,4-dioxygenase
CLQ68_RS13375	COG3485	protocatechuate 3,4-dioxygenase
CLQ68_RS13380	COG5383	Protein conserved in bacteria
CLQ68_RS13385	COG2272	Belongs to the type-B carboxylesterase lipase family
CLQ68_RS13400	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CLQ68_RS13405	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CLQ68_RS13410	COG1275	C4-dicarboxylate transporter malic acid transport protein
CLQ68_RS13415	COG0500	methyltransferase
CLQ68_RS13425	COG0697	spore germination
CLQ68_RS13430	COG3708	Transcriptional regulator
CLQ68_RS13430	COG2207	Transcriptional regulator
CLQ68_RS13435	COG3135	benzoate transporter
CLQ68_RS13440	COG1396	sequence-specific DNA binding
CLQ68_RS13450	COG0826	peptidase U32
CLQ68_RS13470	COG1294	oxidase, subunit
CLQ68_RS13475	COG1271	oxidase subunit
CLQ68_RS13480	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CLQ68_RS13485	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CLQ68_RS13490	COG3842	ATPase activity
CLQ68_RS13495	COG1176	ABC-type spermidine putrescine transport system, permease component I
CLQ68_RS13500	COG1177	transmembrane transport
CLQ68_RS13505	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS13535	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS13540	COG0747	negative chemotaxis
CLQ68_RS13550	COG3238	Protein conserved in bacteria
CLQ68_RS13555	COG1247	-acetyltransferase
CLQ68_RS13565	COG2130	NADP-dependent
CLQ68_RS13580	COG3691	Protein conserved in bacteria
CLQ68_RS13585	COG1228	amidohydrolase
CLQ68_RS13590	COG4772	TonB-dependent receptor
CLQ68_RS13615	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CLQ68_RS13620	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CLQ68_RS13625	COG1473	amidohydrolase
CLQ68_RS13630	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CLQ68_RS13635	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLQ68_RS13645	COG0765	amino acid transport
CLQ68_RS13650	COG1126	abc transporter atp-binding protein
CLQ68_RS13670	COG1609	Transcriptional regulator
CLQ68_RS13675	COG0625	glutathione transferase activity
CLQ68_RS13700	COG2211	Major facilitator Superfamily
CLQ68_RS13715	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CLQ68_RS13720	COG3842	ATPase activity
CLQ68_RS13725	COG1840	ABC-type Fe3 transport system, periplasmic component
CLQ68_RS13730	COG1178	ABC-type Fe3 transport system permease component
CLQ68_RS13735	COG2162	N-hydroxyarylamine O-acetyltransferase activity
CLQ68_RS13740	COG2181	nitrate reductase activity
CLQ68_RS13745	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CLQ68_RS13750	COG1140	nitrate reductase beta subunit
CLQ68_RS13755	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CLQ68_RS13775	COG1414	Transcriptional regulator
CLQ68_RS13780	COG4948	Mandelate Racemase Muconate Lactonizing
CLQ68_RS13785	COG4829	muconolactone delta-isomerase
CLQ68_RS13790	COG3485	protocatechuate 3,4-dioxygenase
CLQ68_RS13800	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
CLQ68_RS13820	COG3383	formate dehydrogenase (NAD+) activity
CLQ68_RS13820	COG0243	molybdopterin cofactor binding
CLQ68_RS13825	COG3383	formate dehydrogenase (NAD+) activity
CLQ68_RS13825	COG0243	molybdopterin cofactor binding
CLQ68_RS13830	COG0437	4 iron, 4 sulfur cluster binding
CLQ68_RS13835	COG2864	formate dehydrogenase
CLQ68_RS13850	COG2326	polyphosphate kinase activity
CLQ68_RS13860	COG2814	Major facilitator Superfamily
CLQ68_RS13870	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CLQ68_RS13880	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLQ68_RS13890	COG0747	negative chemotaxis
CLQ68_RS13895	COG1064	alcohol dehydrogenase
CLQ68_RS13910	COG0488	(ABC) transporter
CLQ68_RS13950	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS13955	COG3729	General stress protein
CLQ68_RS13975	COG3685	Protein conserved in bacteria
CLQ68_RS13985	COG0366	Alpha amylase catalytic
CLQ68_RS14005	COG3111	PFAM Bacterial OB fold (BOF) protein
CLQ68_RS14010	COG1764	response to oxidative stress
CLQ68_RS14035	COG3781	membrane
CLQ68_RS14040	COG0243	molybdopterin cofactor binding
CLQ68_RS14045	COG0583	DNA-binding transcription factor activity
CLQ68_RS14050	COG1447	Phosphotransferase system cellobiose-specific component IIA
CLQ68_RS14055	COG2814	Major facilitator Superfamily
CLQ68_RS14065	COG1285	pathogenesis
CLQ68_RS14070	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CLQ68_RS14080	COG0583	DNA-binding transcription factor activity
CLQ68_RS14100	COG0519	Catalyzes the synthesis of GMP from XMP
CLQ68_RS14100	COG0518	GMP synthase (glutamine-hydrolyzing) activity
CLQ68_RS14140	COG0596	Alpha beta hydrolase
CLQ68_RS14150	COG2205	protein histidine kinase activity
CLQ68_RS14165	COG0076	glutamate decarboxylase activity
CLQ68_RS14170	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CLQ68_RS14175	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CLQ68_RS14180	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLQ68_RS14185	COG1116	anion transmembrane transporter activity
CLQ68_RS14190	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CLQ68_RS14205	COG0673	inositol 2-dehydrogenase activity
CLQ68_RS14215	COG1609	Transcriptional regulator
CLQ68_RS14220	COG3706	GGDEF domain
CLQ68_RS14225	COG0402	S-adenosylhomocysteine deaminase activity
CLQ68_RS14230	COG1953	Uracil, thiamine, allantoin
CLQ68_RS14265	COG0596	Alpha beta hydrolase
CLQ68_RS14280	COG2207	Transcriptional regulator
CLQ68_RS14300	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CLQ68_RS14365	COG0765	amino acid transport
CLQ68_RS14375	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
CLQ68_RS14385	COG2070	2-Nitropropane dioxygenase
CLQ68_RS14390	COG0583	DNA-binding transcription factor activity
CLQ68_RS14400	COG1902	pentaerythritol trinitrate reductase activity
CLQ68_RS14405	COG4529	Protein conserved in bacteria
CLQ68_RS14410	COG0477	Major facilitator Superfamily
CLQ68_RS14455	COG2223	nitrite transmembrane transporter activity
CLQ68_RS14465	COG1609	Transcriptional regulator
CLQ68_RS14470	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS14480	COG3037	sugar-specific permease SgaT UlaA
CLQ68_RS14485	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CLQ68_RS14495	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CLQ68_RS14500	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CLQ68_RS14500	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
CLQ68_RS14500	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CLQ68_RS14510	COG1652	LysM domain
CLQ68_RS14540	COG0456	acetyltransferase
CLQ68_RS14540	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CLQ68_RS14550	COG0667	Aldo Keto reductase
CLQ68_RS14555	COG0667	Aldo Keto reductase
CLQ68_RS14560	COG3386	PFAM SMP-30 Gluconolaconase
CLQ68_RS14565	COG0667	Aldo Keto reductase
CLQ68_RS14590	COG2801	Transposase and inactivated derivatives
CLQ68_RS14600	COG4977	sequence-specific DNA binding
CLQ68_RS14620	COG4977	sequence-specific DNA binding
CLQ68_RS14640	COG1349	DNA-binding transcription factor activity
CLQ68_RS14645	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CLQ68_RS14650	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CLQ68_RS14655	COG0738	Major facilitator superfamily
CLQ68_RS14680	COG0183	Belongs to the thiolase family
CLQ68_RS14700	COG1929	Belongs to the glycerate kinase type-1 family
CLQ68_RS14705	COG3835	regulator
CLQ68_RS14725	COG2186	Transcriptional regulator
CLQ68_RS14730	COG1263	PTS System
CLQ68_RS14730	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CLQ68_RS14740	COG2814	Major facilitator Superfamily
CLQ68_RS14745	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS14745	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS14755	COG2819	hydrolase of the alpha beta superfamily
CLQ68_RS14760	COG5001	Diguanylate cyclase
CLQ68_RS14760	COG3300	MHYT domain
CLQ68_RS14795	COG3188	usher protein
CLQ68_RS14810	COG1649	PFAM Uncharacterised BCR, COG1649
CLQ68_RS14815	COG3550	peptidyl-serine autophosphorylation
CLQ68_RS14820	COG1396	sequence-specific DNA binding
CLQ68_RS14825	COG2351	hydroxyisourate hydrolase activity
CLQ68_RS14830	COG3648	Uricase
CLQ68_RS14830	COG3195	allantoin biosynthetic process
CLQ68_RS14835	COG2233	PERMEase
CLQ68_RS14865	COG2207	Transcriptional regulator
CLQ68_RS14880	COG4628	conserved protein (DUF2132)
CLQ68_RS14900	COG2011	ABC-type metal ion transport system permease component
CLQ68_RS14905	COG2070	2-Nitropropane dioxygenase
CLQ68_RS14915	COG0477	Major facilitator Superfamily
CLQ68_RS14975	COG2199	diguanylate cyclase activity
CLQ68_RS14990	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS14995	COG0583	DNA-binding transcription factor activity
CLQ68_RS15005	COG0039	L-malate dehydrogenase activity
CLQ68_RS15010	COG1349	DNA-binding transcription factor activity
CLQ68_RS15015	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CLQ68_RS15020	COG3395	kinase activity
CLQ68_RS15030	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CLQ68_RS15035	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CLQ68_RS15040	COG2271	Major facilitator Superfamily
CLQ68_RS15065	COG4977	sequence-specific DNA binding
CLQ68_RS15075	COG0697	spore germination
CLQ68_RS15080	COG2814	Major facilitator Superfamily
CLQ68_RS15115	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CLQ68_RS15155	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CLQ68_RS15170	COG1349	DNA-binding transcription factor activity
CLQ68_RS15180	COG2084	Dehydrogenase
CLQ68_RS15185	COG3395	kinase activity
CLQ68_RS15190	COG0235	Class ii aldolase
CLQ68_RS15195	COG3622	Belongs to the hyi family
CLQ68_RS15200	COG2610	gluconate transmembrane transporter activity
CLQ68_RS15205	COG2207	Transcriptional regulator
CLQ68_RS15205	COG3708	Transcriptional regulator
CLQ68_RS15220	COG2200	EAL domain
CLQ68_RS15225	COG1546	Belongs to the CinA family
CLQ68_RS15230	COG0071	Belongs to the small heat shock protein (HSP20) family
CLQ68_RS15250	COG2135	peptidase activity
CLQ68_RS15255	COG2207	Transcriptional regulator
CLQ68_RS15270	COG4221	oxidoreductase activity
CLQ68_RS15275	COG1802	Transcriptional regulator
CLQ68_RS15280	COG0589	response to stress
CLQ68_RS15285	COG0246	Mannitol dehydrogenase
CLQ68_RS15290	COG2271	Major facilitator Superfamily
CLQ68_RS15305	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CLQ68_RS15320	COG0243	molybdopterin cofactor binding
CLQ68_RS15325	COG0437	4 iron, 4 sulfur cluster binding
CLQ68_RS15330	COG3302	dmso reductase anchor subunit
CLQ68_RS15345	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CLQ68_RS15350	COG1940	carbohydrate kinase activity
CLQ68_RS15355	COG0583	DNA-binding transcription factor activity
CLQ68_RS15360	COG2814	Major facilitator Superfamily
CLQ68_RS15365	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
CLQ68_RS15375	COG3591	Belongs to the peptidase S1B family
CLQ68_RS15395	COG0628	permease
CLQ68_RS15425	COG0679	Auxin Efflux Carrier
CLQ68_RS15435	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CLQ68_RS15460	COG3290	protein histidine kinase activity
CLQ68_RS15465	COG4565	transcriptional regulatory protein
CLQ68_RS15490	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CLQ68_RS15490	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CLQ68_RS15515	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CLQ68_RS15520	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CLQ68_RS15530	COG0183	Belongs to the thiolase family
CLQ68_RS15535	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
CLQ68_RS15545	COG1414	Transcriptional regulator
CLQ68_RS15550	COG2840	Smr protein MutS2
CLQ68_RS15555	COG0583	DNA-binding transcription factor activity
CLQ68_RS15565	COG1473	amidohydrolase
CLQ68_RS15570	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
CLQ68_RS15585	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CLQ68_RS15600	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CLQ68_RS15605	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CLQ68_RS15625	COG0531	amino acid
CLQ68_RS15635	COG3136	membrane protein required for alginate biosynthesis
CLQ68_RS15640	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS15650	COG2205	protein histidine kinase activity
CLQ68_RS15660	COG0114	fumarate hydratase activity
CLQ68_RS15665	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CLQ68_RS15665	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CLQ68_RS15670	COG1482	cell wall glycoprotein biosynthetic process
CLQ68_RS15675	COG5339	Protein conserved in bacteria
CLQ68_RS15680	COG1609	Transcriptional regulator
CLQ68_RS15685	COG1263	PTS System
CLQ68_RS15685	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CLQ68_RS15690	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CLQ68_RS15715	COG2391	methyltransferase activity
CLQ68_RS15720	COG0425	Belongs to the sulfur carrier protein TusA family
CLQ68_RS15725	COG5562	phage envelope protein
CLQ68_RS15730	COG0401	homolog of Blt101
CLQ68_RS15735	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CLQ68_RS15740	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS15745	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CLQ68_RS15750	COG0477	Major facilitator Superfamily
CLQ68_RS15755	COG1113	amino acid transport
CLQ68_RS15760	COG2988	succinylglutamate desuccinylase activity
CLQ68_RS15765	COG3724	N-succinylarginine dihydrolase activity
CLQ68_RS15770	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS15775	COG3138	arginine N-succinyltransferase
CLQ68_RS15780	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
CLQ68_RS15785	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CLQ68_RS15790	COG0667	Aldo Keto reductase
CLQ68_RS15795	COG0583	DNA-binding transcription factor activity
CLQ68_RS15820	COG4122	O-methyltransferase activity
CLQ68_RS15825	COG1643	Atp-dependent helicase
CLQ68_RS15840	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CLQ68_RS15845	COG3327	negative regulation of DNA-templated transcription, initiation
CLQ68_RS15850	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
CLQ68_RS15855	COG0183	Belongs to the thiolase family
CLQ68_RS15860	COG2050	protein possibly involved in aromatic compounds catabolism
CLQ68_RS15865	COG1250	3-hydroxyacyl-CoA dehydrogenase
CLQ68_RS15870	COG1024	Enoyl-CoA hydratase
CLQ68_RS15875	COG1024	Enoyl-CoA hydratase
CLQ68_RS15880	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CLQ68_RS15885	COG2151	metal-sulfur cluster biosynthetic enzyme
CLQ68_RS15890	COG3396	Phenylacetate-CoA oxygenase
CLQ68_RS15895	COG3460	Phenylacetate-CoA oxygenase
CLQ68_RS15900	COG3396	Phenylacetate-CoA oxygenase
CLQ68_RS15905	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS15905	COG2030	dehydratase
CLQ68_RS15930	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS15935	COG2207	Transcriptional regulator
CLQ68_RS15940	COG3784	Protein of unknown function (DUF1318)
CLQ68_RS15950	COG2911	Protein conserved in bacteria
CLQ68_RS15955	COG0586	Pfam SNARE associated Golgi protein
CLQ68_RS15960	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CLQ68_RS15965	COG3187	Heat shock protein
CLQ68_RS15970	COG3042	response to heat
CLQ68_RS15980	COG0674	pyruvate-flavodoxin oxidoreductase activity
CLQ68_RS15980	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CLQ68_RS15980	COG1013	pyruvate-flavodoxin oxidoreductase activity
CLQ68_RS15980	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CLQ68_RS15985	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CLQ68_RS15995	COG0589	response to stress
CLQ68_RS16005	COG0513	Belongs to the DEAD box helicase family
CLQ68_RS16020	COG1349	DNA-binding transcription factor activity
CLQ68_RS16025	COG0673	inositol 2-dehydrogenase activity
CLQ68_RS16040	COG1113	amino acid transport
CLQ68_RS16045	COG1522	sequence-specific DNA binding
CLQ68_RS16055	COG1448	Aminotransferase
CLQ68_RS16060	COG2011	ABC-type metal ion transport system permease component
CLQ68_RS16075	COG0436	Aminotransferase
CLQ68_RS16080	COG0604	alcohol dehydrogenase
CLQ68_RS16125	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS16130	COG1309	transcriptional regulator
CLQ68_RS16135	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS16215	COG2885	chlorophyll binding
CLQ68_RS16240	COG0693	protein deglycase activity
CLQ68_RS16245	COG1078	dGTPase activity
CLQ68_RS16250	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS16255	COG0583	DNA-binding transcription factor activity
CLQ68_RS16275	COG0656	L-ascorbic acid biosynthetic process
CLQ68_RS16305	COG4166	transmembrane transport
CLQ68_RS16310	COG2866	Carboxypeptidase
CLQ68_RS16315	COG4948	Mandelate Racemase Muconate Lactonizing
CLQ68_RS16320	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CLQ68_RS16325	COG3180	Ammonia monooxygenase
CLQ68_RS16335	COG1486	melibiose metabolic process
CLQ68_RS16340	COG0583	DNA-binding transcription factor activity
CLQ68_RS16350	COG3106	COG3106 Predicted ATPase
CLQ68_RS16360	COG1983	PspC domain protein
CLQ68_RS16370	COG1842	Phage shock protein A
CLQ68_RS16375	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CLQ68_RS16385	COG1473	amidohydrolase
CLQ68_RS16400	COG0702	epimerase
CLQ68_RS16415	COG4171	peptide transport system, permease
CLQ68_RS16430	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CLQ68_RS16440	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CLQ68_RS16445	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CLQ68_RS16445	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CLQ68_RS16460	COG1349	DNA-binding transcription factor activity
CLQ68_RS16470	COG0023	Translation Initiation Factor
CLQ68_RS16480	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CLQ68_RS16485	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
CLQ68_RS16490	COG0671	phosphoesterase, PA-phosphatase related
CLQ68_RS16500	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CLQ68_RS16530	COG0616	signal peptide processing
CLQ68_RS16540	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS16545	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
CLQ68_RS16620	COG0582	viral genome integration into host DNA
CLQ68_RS16645	COG0583	DNA-binding transcription factor activity
CLQ68_RS16655	COG0009	L-threonylcarbamoyladenylate synthase
CLQ68_RS16665	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CLQ68_RS16670	COG0512	Glutamine amidotransferase of anthranilate synthase
CLQ68_RS16670	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CLQ68_RS16675	COG0135	phosphoribosylanthranilate isomerase activity
CLQ68_RS16675	COG0134	indole-3-glycerol-phosphate synthase activity
CLQ68_RS16710	COG4774	siderophore transport
CLQ68_RS16720	COG3047	cAMP biosynthetic process
CLQ68_RS16725	COG0727	PFAM Uncharacterised protein family (UPF0153)
CLQ68_RS16755	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CLQ68_RS16760	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS16765	COG1988	membrane-bound metal-dependent
CLQ68_RS16770	COG1823	symporter activity
CLQ68_RS16780	COG0753	catalase activity
CLQ68_RS16790	COG1486	melibiose metabolic process
CLQ68_RS16795	COG2169	Transcriptional regulator
CLQ68_RS16795	COG1917	Cupin 2, conserved barrel domain protein
CLQ68_RS16800	COG1447	Phosphotransferase system cellobiose-specific component IIA
CLQ68_RS16805	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS16810	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS16815	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CLQ68_RS16825	COG0322	excinuclease ABC activity
CLQ68_RS16830	COG3678	ATP-independent chaperone mediated protein folding
CLQ68_RS16840	COG3724	N-succinylarginine dihydrolase activity
CLQ68_RS16850	COG3138	arginine N-succinyltransferase
CLQ68_RS16860	COG0708	Exodeoxyribonuclease III
CLQ68_RS16865	COG0398	Pfam SNARE associated Golgi protein
CLQ68_RS16870	COG0398	Pfam SNARE associated Golgi protein
CLQ68_RS16875	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CLQ68_RS16880	COG4134	Bacterial extracellular solute-binding protein
CLQ68_RS16885	COG4135	transport system, permease component
CLQ68_RS16890	COG4136	ATPase activity
CLQ68_RS16895	COG2897	thiosulfate sulfurtransferase activity
CLQ68_RS16900	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CLQ68_RS16905	COG0494	nUDIX hydrolase
CLQ68_RS16910	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CLQ68_RS16915	COG0604	alcohol dehydrogenase
CLQ68_RS16915	COG3321	synthase
CLQ68_RS16915	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS16920	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CLQ68_RS16925	COG0709	Synthesizes selenophosphate from selenide and ATP
CLQ68_RS16940	COG0778	Nitroreductase
CLQ68_RS16945	COG0616	signal peptide processing
CLQ68_RS16950	COG0252	asparaginase activity
CLQ68_RS16955	COG1335	isochorismatase
CLQ68_RS16970	COG3139	Protein of unknown function (DUF1315)
CLQ68_RS16990	COG0656	L-ascorbic acid biosynthetic process
CLQ68_RS16995	COG3713	MltA-interacting MipA family protein
CLQ68_RS17000	COG2766	serine protein kinase
CLQ68_RS17015	COG0386	Belongs to the glutathione peroxidase family
CLQ68_RS17035	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS17040	COG0583	DNA-binding transcription factor activity
CLQ68_RS17045	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CLQ68_RS17050	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CLQ68_RS17055	COG3344	reverse transcriptase
CLQ68_RS17070	COG0859	PFAM glycosyl transferase family 9
CLQ68_RS17075	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CLQ68_RS17085	COG2207	Transcriptional regulator
CLQ68_RS17090	COG2807	transmembrane transport
CLQ68_RS17095	COG0504	CTP synthase activity
CLQ68_RS17100	COG1683	Conserved Protein
CLQ68_RS17105	COG3189	MarR family transcriptional regulator
CLQ68_RS17110	COG3042	response to heat
CLQ68_RS17115	COG2203	Gaf domain
CLQ68_RS17115	COG2199	diguanylate cyclase activity
CLQ68_RS17135	COG3182	Iron-regulated membrane protein
CLQ68_RS17145	COG1560	Kdo2-lipid A biosynthetic process
CLQ68_RS17160	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
CLQ68_RS17165	COG3706	GGDEF domain
CLQ68_RS17170	COG0583	DNA-binding transcription factor activity
CLQ68_RS17175	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
CLQ68_RS17200	COG1294	oxidase, subunit
CLQ68_RS17205	COG1271	oxidase subunit
CLQ68_RS17210	COG3546	catalase activity
CLQ68_RS17215	COG3685	Protein conserved in bacteria
CLQ68_RS17220	COG3685	Protein conserved in bacteria
CLQ68_RS17225	COG3729	General stress protein
CLQ68_RS17230	COG1063	alcohol dehydrogenase
CLQ68_RS17235	COG3813	Protein conserved in bacteria
CLQ68_RS17255	COG0640	Transcriptional regulator
CLQ68_RS17260	COG0538	isocitrate dehydrogenase activity
CLQ68_RS17350	COG0616	signal peptide processing
CLQ68_RS17365	COG1802	Transcriptional regulator
CLQ68_RS17365	COG4626	Terminase
CLQ68_RS17410	COG3772	lysozyme
CLQ68_RS17425	COG1403	HNH endonuclease
CLQ68_RS17530	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CLQ68_RS17540	COG0582	viral genome integration into host DNA
CLQ68_RS17545	COG0538	isocitrate dehydrogenase activity
CLQ68_RS17550	COG1187	pseudouridine synthase activity
CLQ68_RS17570	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CLQ68_RS17595	COG2850	peptidyl-arginine hydroxylation
CLQ68_RS17615	COG1177	transmembrane transport
CLQ68_RS17630	COG0318	PFAM AMP-dependent synthetase and ligase
CLQ68_RS17635	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CLQ68_RS17640	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CLQ68_RS17645	COG0698	ribose 5-phosphate isomerase
CLQ68_RS17660	COG3395	kinase activity
CLQ68_RS17675	COG2390	Transcriptional regulator
CLQ68_RS17685	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CLQ68_RS17695	COG4591	ABC-type transport system involved in lipoprotein release permease component
CLQ68_RS17705	COG4591	ABC-type transport system involved in lipoprotein release permease component
CLQ68_RS17710	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CLQ68_RS17715	COG1376	ErfK ybiS ycfS ynhG family protein
CLQ68_RS17715	COG1388	LysM domain
CLQ68_RS17725	COG1309	transcriptional regulator
CLQ68_RS17735	COG3134	Outer membrane lipoprotein
CLQ68_RS17740	COG1252	NADH dehydrogenase
CLQ68_RS17765	COG5633	Lipoprotein
CLQ68_RS17770	COG0537	adenosine 5'-monophosphoramidase activity
CLQ68_RS17780	COG0084	hydrolase, TatD family'
CLQ68_RS17785	COG0470	DNA polymerase III
CLQ68_RS17795	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CLQ68_RS17800	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CLQ68_RS17805	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CLQ68_RS17820	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CLQ68_RS17840	COG1399	metal-binding, possibly nucleic acid-binding protein
CLQ68_RS17860	COG1530	ribonuclease E activity
CLQ68_RS17865	COG0583	DNA-binding transcription factor activity
CLQ68_RS17870	COG2814	Major facilitator Superfamily
CLQ68_RS17890	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CLQ68_RS17940	COG1560	Kdo2-lipid A biosynthetic process
CLQ68_RS17960	COG5645	(Lipo)protein
CLQ68_RS18000	COG3381	protein complex oligomerization
CLQ68_RS18025	COG0583	DNA-binding transcription factor activity
CLQ68_RS18035	COG1335	isochorismatase
CLQ68_RS18045	COG1702	phosphate starvation-inducible protein PhoH
CLQ68_RS18065	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CLQ68_RS18075	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CLQ68_RS18095	COG1309	transcriptional regulator
CLQ68_RS18130	COG2233	PERMEase
CLQ68_RS18145	COG3729	General stress protein
CLQ68_RS18170	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS18185	COG0531	amino acid
CLQ68_RS18195	COG0174	glutamine synthetase
CLQ68_RS18200	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CLQ68_RS18205	COG1917	Cupin 2, conserved barrel domain protein
CLQ68_RS18205	COG1396	sequence-specific DNA binding
CLQ68_RS18210	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS18215	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CLQ68_RS18220	COG0583	DNA-binding transcription factor activity
CLQ68_RS18225	COG0473	3-isopropylmalate dehydrogenase activity
CLQ68_RS18230	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CLQ68_RS18235	COG4638	Rieske (2fe-2S)
CLQ68_RS18240	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS18245	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CLQ68_RS18270	COG0670	Belongs to the BI1 family
CLQ68_RS18285	COG2207	Transcriptional regulator
CLQ68_RS18290	COG1881	PFAM PEBP family protein
CLQ68_RS18305	COG1832	CoA-binding protein
CLQ68_RS18315	COG0210	DNA helicase
CLQ68_RS18320	COG3304	Inner membrane component domain
CLQ68_RS18325	COG1289	transmembrane transporter activity
CLQ68_RS18330	COG3070	regulator of competence-specific genes
CLQ68_RS18355	COG1067	ATP-dependent peptidase activity
CLQ68_RS18365	COG3130	regulation of translation
CLQ68_RS18375	COG3009	Protein conserved in bacteria
CLQ68_RS18380	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CLQ68_RS18380	COG3008	intermembrane lipid transfer
CLQ68_RS18385	COG2995	paraquat-inducible protein a
CLQ68_RS18390	COG0488	(ABC) transporter
CLQ68_RS18400	COG3217	Mosc domain protein beta barrel domain protein
CLQ68_RS18400	COG0633	Ferredoxin
CLQ68_RS18415	COG0431	NADPH-dependent FMN reductase
CLQ68_RS18420	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CLQ68_RS18425	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CLQ68_RS18430	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLQ68_RS18440	COG0308	aminopeptidase N
CLQ68_RS18455	COG1473	amidohydrolase
CLQ68_RS18465	COG0814	amino acid
CLQ68_RS18475	COG1522	sequence-specific DNA binding
CLQ68_RS18485	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CLQ68_RS18490	COG1448	Aminotransferase
CLQ68_RS18495	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CLQ68_RS18500	COG3108	Peptidase M15
CLQ68_RS18510	COG2989	Protein conserved in bacteria
CLQ68_RS18520	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
CLQ68_RS18530	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CLQ68_RS18535	COG1434	Gram-negative-bacterium-type cell wall biogenesis
CLQ68_RS18540	COG3173	Aminoglycoside phosphotransferase
CLQ68_RS18555	COG3214	Protein conserved in bacteria
CLQ68_RS18570	COG2333	competence protein COMEC
CLQ68_RS18570	COG0658	competence protein
CLQ68_RS18580	COG0539	negative regulation of cytoplasmic translation
CLQ68_RS18600	COG2323	membrane
CLQ68_RS18605	COG1944	ATP diphosphatase activity
CLQ68_RS18610	COG2116	formate transmembrane transporter activity
CLQ68_RS18615	COG1882	Formate acetyltransferase
CLQ68_RS18620	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CLQ68_RS18625	COG0477	Major facilitator Superfamily
CLQ68_RS18635	COG3302	dmso reductase anchor subunit
CLQ68_RS18640	COG0437	4 iron, 4 sulfur cluster binding
CLQ68_RS18645	COG0243	molybdopterin cofactor binding
CLQ68_RS18655	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CLQ68_RS18665	COG1178	ABC-type Fe3 transport system permease component
CLQ68_RS18665	COG1674	ftsk spoiiie
CLQ68_RS18675	COG0492	ferredoxin-NADP+ reductase activity
CLQ68_RS18680	COG4988	ABC transporter
CLQ68_RS18685	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CLQ68_RS18700	COG0542	response to heat
CLQ68_RS18710	COG1278	Cold shock
CLQ68_RS18725	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLQ68_RS18730	COG3593	DNA synthesis involved in DNA repair
CLQ68_RS18740	COG2431	L-lysine efflux transmembrane transporter activity
CLQ68_RS18750	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CLQ68_RS18760	COG0028	Belongs to the TPP enzyme family
CLQ68_RS18765	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
CLQ68_RS18770	COG0702	epimerase
CLQ68_RS18775	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CLQ68_RS18780	COG3023	N-Acetylmuramoyl-L-alanine amidase
CLQ68_RS18785	COG2203	Gaf domain
CLQ68_RS18785	COG3706	GGDEF domain
CLQ68_RS18785	COG4251	negative regulation of phosphorylation
CLQ68_RS18785	COG5001	Diguanylate cyclase
CLQ68_RS18800	COG1126	abc transporter atp-binding protein
CLQ68_RS18805	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLQ68_RS18810	COG4215	(ABC) transporter
CLQ68_RS18815	COG4160	amino acid transport
CLQ68_RS18820	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLQ68_RS18825	COG5002	protein histidine kinase activity
CLQ68_RS18830	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS18845	COG1177	transmembrane transport
CLQ68_RS18850	COG1176	ABC-type spermidine putrescine transport system, permease component I
CLQ68_RS18855	COG3842	ATPase activity
CLQ68_RS18860	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CLQ68_RS18875	COG0778	Nitroreductase
CLQ68_RS18900	COG3226	Transcriptional regulator
CLQ68_RS18905	COG0738	Major facilitator superfamily
CLQ68_RS18910	COG0561	phosphatase activity
CLQ68_RS18915	COG2814	Major facilitator Superfamily
CLQ68_RS18925	COG0671	phosphoesterase, PA-phosphatase related
CLQ68_RS18930	COG1349	DNA-binding transcription factor activity
CLQ68_RS18935	COG1686	Belongs to the peptidase S11 family
CLQ68_RS18950	COG2133	pyrroloquinoline quinone binding
CLQ68_RS18960	COG2223	nitrite transmembrane transporter activity
CLQ68_RS18985	COG0747	negative chemotaxis
CLQ68_RS18990	COG4172	Belongs to the ABC transporter superfamily
CLQ68_RS19000	COG0303	'Molybdopterin
CLQ68_RS19005	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CLQ68_RS19010	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CLQ68_RS19015	COG1882	Formate acetyltransferase
CLQ68_RS19020	COG0561	phosphatase activity
CLQ68_RS19030	COG1609	Transcriptional regulator
CLQ68_RS19035	COG2271	Major facilitator Superfamily
CLQ68_RS19045	COG0488	(ABC) transporter
CLQ68_RS19050	COG2365	Tyrosine phosphatase family
CLQ68_RS19055	COG1376	ErfK ybiS ycfS ynhG family protein
CLQ68_RS19060	COG2188	Transcriptional regulator
CLQ68_RS19065	COG2723	6-phospho-beta-galactosidase activity
CLQ68_RS19070	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CLQ68_RS19085	COG2194	sulfuric ester hydrolase activity
CLQ68_RS19090	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
CLQ68_RS19105	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLQ68_RS19110	COG0765	amino acid transport
CLQ68_RS19115	COG1126	abc transporter atp-binding protein
CLQ68_RS19120	COG0668	transmembrane transport
CLQ68_RS19130	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CLQ68_RS19140	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CLQ68_RS19150	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CLQ68_RS19155	COG1199	ATP-dependent helicase activity
CLQ68_RS19160	COG0513	Belongs to the DEAD box helicase family
CLQ68_RS19165	COG3958	Transketolase
CLQ68_RS19170	COG3959	Transketolase, thiamine diphosphate binding domain
CLQ68_RS19175	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS19180	COG2271	Major facilitator Superfamily
CLQ68_RS19185	COG0583	DNA-binding transcription factor activity
CLQ68_RS19190	COG1309	transcriptional regulator
CLQ68_RS19195	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLQ68_RS19200	COG1131	(ABC) transporter
CLQ68_RS19205	COG0842	Transport permease protein
CLQ68_RS19210	COG0842	Transport permease protein
CLQ68_RS19225	COG3568	Endonuclease Exonuclease Phosphatase
CLQ68_RS19230	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CLQ68_RS19235	COG0392	lysyltransferase activity
CLQ68_RS19250	COG0670	Belongs to the BI1 family
CLQ68_RS19255	COG0314	molybdopterin synthase activity
CLQ68_RS19260	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CLQ68_RS19270	COG0521	Mo-molybdopterin cofactor biosynthetic process
CLQ68_RS19295	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS19300	COG0642	Histidine kinase
CLQ68_RS19335	COG2226	methyltransferase
CLQ68_RS19355	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CLQ68_RS19360	COG1881	PFAM PEBP family protein
CLQ68_RS19400	COG4677	pectinesterase activity
CLQ68_RS19410	COG0589	response to stress
CLQ68_RS19415	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLQ68_RS19445	COG0789	Transcriptional regulator
CLQ68_RS19450	COG2200	EAL domain
CLQ68_RS19475	COG0561	phosphatase activity
CLQ68_RS19480	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
CLQ68_RS19485	COG4149	molybdate abc transporter
CLQ68_RS19490	COG0725	ABC transporter, periplasmic molybdate-binding protein
CLQ68_RS19500	COG3585	molybdate ion transport
CLQ68_RS19500	COG2005	Transcriptional regulator
CLQ68_RS19505	COG1119	ATPase activity
CLQ68_RS19515	COG1085	galactose-1-phosphate uridylyltransferase
CLQ68_RS19525	COG2017	converts alpha-aldose to the beta-anomer
CLQ68_RS19535	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CLQ68_RS19550	COG3201	nicotinamide mononucleotide transporter
CLQ68_RS19555	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
CLQ68_RS19600	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
CLQ68_RS19605	COG2885	chlorophyll binding
CLQ68_RS19615	COG3064	Membrane
CLQ68_RS19620	COG0848	biopolymer transport protein
CLQ68_RS19625	COG0811	peptide transport
CLQ68_RS19630	COG0824	Thioesterase
CLQ68_RS19635	COG3790	cyd operon protein YbgE
CLQ68_RS19640	COG4890	Cyd operon protein YbgT
CLQ68_RS19645	COG1294	oxidase, subunit
CLQ68_RS19650	COG1271	oxidase subunit
CLQ68_RS19655	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CLQ68_RS19665	COG0508	dehydrogenase complex catalyzes the overall conversion of
CLQ68_RS19670	COG0567	Dehydrogenase, E1 component
CLQ68_RS19675	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CLQ68_RS19680	COG1053	succinate dehydrogenase
CLQ68_RS19685	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
CLQ68_RS19690	COG2009	succinate dehydrogenase
CLQ68_RS19725	COG1984	allophanate hydrolase subunit 2
CLQ68_RS19730	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CLQ68_RS19745	COG0415	Belongs to the DNA photolyase family
CLQ68_RS19775	COG2205	protein histidine kinase activity
CLQ68_RS19780	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS19790	COG0033	Phosphoglucomutase
CLQ68_RS19800	COG0596	Alpha beta hydrolase
CLQ68_RS19815	COG0735	belongs to the Fur family
CLQ68_RS19855	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CLQ68_RS19860	COG1940	carbohydrate kinase activity
CLQ68_RS19860	COG1846	Transcriptional regulator
CLQ68_RS19865	COG0647	UMP catabolic process
CLQ68_RS19870	COG0367	asparagine synthase
CLQ68_RS19915	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CLQ68_RS19925	COG1702	phosphate starvation-inducible protein PhoH
CLQ68_RS19950	COG0765	amino acid transport
CLQ68_RS19955	COG0765	amino acid transport
CLQ68_RS19960	COG1126	abc transporter atp-binding protein
CLQ68_RS19975	COG2888	peptidyl-tyrosine sulfation
CLQ68_RS19990	COG1466	dna polymerase III delta subunit
CLQ68_RS20010	COG0799	negative regulation of ribosome biogenesis
CLQ68_RS20020	COG0768	penicillin binding
CLQ68_RS20025	COG0772	Belongs to the SEDS family
CLQ68_RS20030	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CLQ68_RS20035	COG1686	Belongs to the peptidase S11 family
CLQ68_RS20050	COG0583	DNA-binding transcription factor activity
CLQ68_RS20060	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CLQ68_RS20065	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CLQ68_RS20085	COG3069	C4-dicarboxylate transmembrane transporter activity
CLQ68_RS20090	COG3719	Belongs to the RNase T2 family
CLQ68_RS20095	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CLQ68_RS20115	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CLQ68_RS20120	COG0583	DNA-binding transcription factor activity
CLQ68_RS20125	COG3969	phosphoadenosine phosphosulfate
CLQ68_RS20130	COG1475	DNA binding
CLQ68_RS20135	COG0436	Aminotransferase
CLQ68_RS20160	COG1129	ABC transporter
CLQ68_RS20165	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS20170	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS20180	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CLQ68_RS20195	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
CLQ68_RS20205	COG0402	S-adenosylhomocysteine deaminase activity
CLQ68_RS20215	COG0483	inositol monophosphate 1-phosphatase activity
CLQ68_RS20220	COG2271	Major facilitator Superfamily
CLQ68_RS20250	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS20255	COG1129	ABC transporter
CLQ68_RS20260	COG0371	Dehydrogenase
CLQ68_RS20265	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS20280	COG2879	small protein
CLQ68_RS20285	COG1966	Carbon starvation protein
CLQ68_RS20295	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS20300	COG1535	isochorismatase
CLQ68_RS20300	COG3433	isochorismatase activity
CLQ68_RS20305	COG1021	2,3-dihydroxybenzoate-AMP ligase
CLQ68_RS20310	COG1169	isochorismate synthase
CLQ68_RS20315	COG4592	Periplasmic binding protein
CLQ68_RS20325	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS20330	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS20335	COG1120	ATPase activity
CLQ68_RS20340	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
CLQ68_RS20340	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
CLQ68_RS20345	COG3251	PFAM MbtH domain protein
CLQ68_RS20350	COG2382	esterase
CLQ68_RS20355	COG4771	TonB-dependent receptor
CLQ68_RS20360	COG2977	Belongs to the P-Pant transferase superfamily
CLQ68_RS20365	COG3958	Transketolase
CLQ68_RS20370	COG3959	Transketolase, thiamine diphosphate binding domain
CLQ68_RS20380	COG2390	Transcriptional regulator
CLQ68_RS20385	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CLQ68_RS20390	COG1879	ABC-type sugar transport system periplasmic component
CLQ68_RS20400	COG1129	ABC transporter
CLQ68_RS20405	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS20415	COG1028	Short-chain dehydrogenase reductase Sdr
CLQ68_RS20425	COG0583	DNA-binding transcription factor activity
CLQ68_RS20430	COG0668	transmembrane transport
CLQ68_RS20440	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CLQ68_RS20465	COG0747	negative chemotaxis
CLQ68_RS20470	COG0601	transmembrane transport
CLQ68_RS20475	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLQ68_RS20480	COG0444	Belongs to the ABC transporter superfamily
CLQ68_RS20485	COG4608	Belongs to the ABC transporter superfamily
CLQ68_RS20490	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CLQ68_RS20495	COG4221	oxidoreductase activity
CLQ68_RS20505	COG4215	(ABC) transporter
CLQ68_RS20510	COG0765	amino acid transport
CLQ68_RS20515	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
CLQ68_RS20530	COG0697	spore germination
CLQ68_RS20545	COG4608	Belongs to the ABC transporter superfamily
CLQ68_RS20550	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLQ68_RS20560	COG4166	transmembrane transport
CLQ68_RS20570	COG3698	Phosphodiester glycosidase
CLQ68_RS20615	COG2315	Protein conserved in bacteria
CLQ68_RS20620	COG0778	Nitroreductase
CLQ68_RS20630	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CLQ68_RS20640	COG3716	PTS system mannose fructose sorbose family IID component
CLQ68_RS20645	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CLQ68_RS20650	COG2222	sugar isomerase
CLQ68_RS20655	COG3933	PFAM sigma-54 factor interaction domain-containing protein
CLQ68_RS20655	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CLQ68_RS20675	COG0477	Major facilitator Superfamily
CLQ68_RS20680	COG0668	transmembrane transport
CLQ68_RS20685	COG1609	Transcriptional regulator
CLQ68_RS20695	COG0673	inositol 2-dehydrogenase activity
CLQ68_RS20705	COG2211	Major facilitator Superfamily
CLQ68_RS20710	COG1113	amino acid transport
CLQ68_RS20725	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS20730	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CLQ68_RS20740	COG0531	amino acid
CLQ68_RS20790	COG0667	Aldo Keto reductase
CLQ68_RS20795	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLQ68_RS20800	COG1473	amidohydrolase
CLQ68_RS20820	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS20825	COG1120	ATPase activity
CLQ68_RS20830	COG1566	PFAM secretion protein HlyD family protein
CLQ68_RS20875	COG4211	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS20880	COG1129	ABC transporter
CLQ68_RS20895	COG0673	inositol 2-dehydrogenase activity
CLQ68_RS20925	COG3104	oligopeptide transport
CLQ68_RS20930	COG1982	Orn Lys Arg decarboxylase major
CLQ68_RS20935	COG0531	amino acid
CLQ68_RS20940	COG3710	Transcriptional regulator
CLQ68_RS20950	COG1560	Kdo2-lipid A biosynthetic process
CLQ68_RS20965	COG3188	usher protein
CLQ68_RS20970	COG3121	Chaperone
CLQ68_RS20975	COG3539	Fimbrial protein
CLQ68_RS21030	COG2501	S4 domain
CLQ68_RS21040	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CLQ68_RS21055	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CLQ68_RS21060	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CLQ68_RS21075	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
CLQ68_RS21080	COG4181	ATPase activity
CLQ68_RS21085	COG2755	lipolytic protein G-D-S-L family
CLQ68_RS21090	COG0300	oxidoreductase activity
CLQ68_RS21095	COG3118	belongs to the thioredoxin family
CLQ68_RS21105	COG0390	transport system, permease component
CLQ68_RS21110	COG4619	ABC transporter
CLQ68_RS21115	COG0330	HflC and HflK could
CLQ68_RS21120	COG1585	Membrane protein implicated in regulation of membrane protease activity
CLQ68_RS21135	COG3735	TraB family
CLQ68_RS21140	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CLQ68_RS21150	COG2223	nitrite transmembrane transporter activity
CLQ68_RS21155	COG4651	solute:proton antiporter activity
CLQ68_RS21155	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CLQ68_RS21160	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CLQ68_RS21200	COG2832	Protein of unknown function (DUF454)
CLQ68_RS21205	COG3923	Primosomal replication protein n
CLQ68_RS21220	COG1196	nuclear chromosome segregation
CLQ68_RS21220	COG3264	Mechanosensitive ion channel
CLQ68_RS21230	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLQ68_RS21235	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLQ68_RS21250	COG0110	maltose O-acetyltransferase activity
CLQ68_RS21295	COG1874	Beta-galactosidase
CLQ68_RS21300	COG3867	Arabinogalactan endo-beta-1,4-galactanase
CLQ68_RS21305	COG3833	ABC-type maltose transport systems, permease component
CLQ68_RS21310	COG1175	transmembrane transport
CLQ68_RS21315	COG2182	Extracellular solute-binding protein
CLQ68_RS21325	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CLQ68_RS21340	COG2364	Membrane
CLQ68_RS21370	COG3695	enzyme binding
CLQ68_RS21375	COG3126	Type III secretion system lipoprotein chaperone (YscW)
CLQ68_RS21380	COG1946	Acyl-CoA thioesterase
CLQ68_RS21385	COG0004	ammonium transporteR
CLQ68_RS21390	COG0347	Belongs to the P(II) protein family
CLQ68_RS21395	COG1132	(ABC) transporter
CLQ68_RS21400	COG1132	(ABC) transporter
CLQ68_RS21405	COG1522	sequence-specific DNA binding
CLQ68_RS21420	COG4533	DNA binding
CLQ68_RS21430	COG0824	Thioesterase
CLQ68_RS21435	COG1555	photosystem II stabilization
CLQ68_RS21440	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CLQ68_RS21445	COG0776	regulation of translation
CLQ68_RS21450	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CLQ68_RS21480	COG0271	Belongs to the BolA IbaG family
CLQ68_RS21485	COG3056	Lipoprotein
CLQ68_RS21490	COG2223	nitrite transmembrane transporter activity
CLQ68_RS21495	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
CLQ68_RS21500	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
CLQ68_RS21505	COG1845	cytochrome c oxidase, subunit III
CLQ68_RS21510	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CLQ68_RS21525	COG1414	Transcriptional regulator
CLQ68_RS21530	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
CLQ68_RS21535	COG1053	succinate dehydrogenase
CLQ68_RS21545	COG1053	succinate dehydrogenase
CLQ68_RS21560	COG0673	inositol 2-dehydrogenase activity
CLQ68_RS21565	COG2814	Major facilitator Superfamily
CLQ68_RS21575	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CLQ68_RS21580	COG0693	protein deglycase activity
CLQ68_RS21600	COG0142	geranyltranstransferase activity
CLQ68_RS21610	COG0667	Aldo Keto reductase
CLQ68_RS21615	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CLQ68_RS21635	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CLQ68_RS21635	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CLQ68_RS21645	COG4238	major outer membrane lipoprotein
CLQ68_RS21665	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CLQ68_RS21670	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CLQ68_RS21675	COG1862	Preprotein translocase
CLQ68_RS21695	COG0450	alkyl hydroperoxide reductase
CLQ68_RS21700	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS21715	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CLQ68_RS21725	COG1228	amidohydrolase
CLQ68_RS21735	COG1335	isochorismatase
CLQ68_RS21740	COG0583	DNA-binding transcription factor activity
CLQ68_RS21745	COG0366	Alpha amylase catalytic
CLQ68_RS21770	COG0420	3'-5' exonuclease activity
CLQ68_RS21775	COG0419	ATPase involved in DNA repair
CLQ68_RS21780	COG1940	carbohydrate kinase activity
CLQ68_RS21795	COG4126	flavin adenine dinucleotide binding
CLQ68_RS21805	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
CLQ68_RS21810	COG3416	Protein conserved in bacteria
CLQ68_RS21820	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CLQ68_RS21830	COG1785	Belongs to the alkaline phosphatase family
CLQ68_RS21870	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
CLQ68_RS21875	COG1335	isochorismatase
CLQ68_RS21880	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CLQ68_RS21885	COG0113	porphobilinogen synthase activity
CLQ68_RS21890	COG1943	Transposase
CLQ68_RS21900	COG2175	clavaminate synthase activity
CLQ68_RS21905	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CLQ68_RS21910	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
CLQ68_RS21915	COG4521	taurine ABC transporter
CLQ68_RS21920	COG2040	homocysteine
CLQ68_RS21925	COG0833	amino acid
CLQ68_RS21935	COG4303	Ethanolamine ammonia lyase large subunit
CLQ68_RS21940	COG4302	ethanolamine ammonia-lyase activity
CLQ68_RS21980	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLQ68_RS21985	COG1126	abc transporter atp-binding protein
CLQ68_RS21990	COG4597	amino acid ABC transporter
CLQ68_RS21995	COG0765	amino acid transport
CLQ68_RS22010	COG3188	usher protein
CLQ68_RS22035	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
CLQ68_RS22045	COG3639	organic phosphonate transmembrane transporter activity
CLQ68_RS22075	COG0791	NLP P60 protein
CLQ68_RS22125	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CLQ68_RS22130	COG0022	dehydrogenase e1 component
CLQ68_RS22135	COG0508	dehydrogenase complex catalyzes the overall conversion of
CLQ68_RS22140	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CLQ68_RS22150	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CLQ68_RS22170	COG0579	oxidoreductase
CLQ68_RS22175	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS22180	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CLQ68_RS22185	COG1113	amino acid transport
CLQ68_RS22190	COG1802	Transcriptional regulator
CLQ68_RS22210	COG2195	Cleaves the N-terminal amino acid of tripeptides
CLQ68_RS22215	COG0454	-acetyltransferase
CLQ68_RS22230	COG2991	Protein conserved in bacteria
CLQ68_RS22245	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
CLQ68_RS22250	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
CLQ68_RS22270	COG3034	peptidoglycan biosynthetic process
CLQ68_RS22275	COG0121	glutamine amidotransferase
CLQ68_RS22285	COG1960	acyl-CoA dehydrogenase activity
CLQ68_RS22290	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CLQ68_RS22300	COG0583	DNA-binding transcription factor activity
CLQ68_RS22310	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CLQ68_RS22320	COG2226	methyltransferase
CLQ68_RS22330	COG1388	LysM domain
CLQ68_RS22330	COG0741	lytic transglycosylase activity
CLQ68_RS22335	COG2226	methyltransferase
CLQ68_RS22345	COG2814	Major facilitator Superfamily
CLQ68_RS22350	COG0583	DNA-binding transcription factor activity
CLQ68_RS22355	COG0656	L-ascorbic acid biosynthetic process
CLQ68_RS22390	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CLQ68_RS22400	COG2011	ABC-type metal ion transport system permease component
CLQ68_RS22405	COG1464	Belongs to the NlpA lipoprotein family
CLQ68_RS22415	COG1720	tRNA m6t6A37 methyltransferase activity
CLQ68_RS22425	COG0791	NLP P60 protein
CLQ68_RS22430	COG3015	lipoprotein NlpE involved in copper resistance
CLQ68_RS22435	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CLQ68_RS22450	COG4568	rho-dependent transcription termination
CLQ68_RS22460	COG0346	lactoylglutathione lyase activity
CLQ68_RS22465	COG1982	Orn Lys Arg decarboxylase major
CLQ68_RS22475	COG0587	DNA-directed DNA polymerase activity
CLQ68_RS22505	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
CLQ68_RS22515	COG0750	zinc metalloprotease
CLQ68_RS22520	COG0575	Belongs to the CDS family
CLQ68_RS22535	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
CLQ68_RS22560	COG0024	Methionine aminopeptidase
CLQ68_RS22565	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
CLQ68_RS22580	COG3835	regulator
CLQ68_RS22585	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CLQ68_RS22605	COG2860	membrane
CLQ68_RS22625	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CLQ68_RS22630	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CLQ68_RS22635	COG1120	ATPase activity
CLQ68_RS22640	COG4774	siderophore transport
CLQ68_RS22645	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CLQ68_RS22730	COG1643	Atp-dependent helicase
CLQ68_RS22735	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
CLQ68_RS22755	COG0617	tRNA 3'-terminal CCA addition
CLQ68_RS22760	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CLQ68_RS22780	COG0726	polysaccharide deacetylase
CLQ68_RS22785	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS22790	COG0842	Transport permease protein
CLQ68_RS22795	COG1131	(ABC) transporter
CLQ68_RS22800	COG0288	reversible hydration of carbon dioxide
CLQ68_RS22810	COG4993	Dehydrogenase
CLQ68_RS22815	COG2132	Multicopper oxidase
CLQ68_RS22855	COG3064	Membrane
CLQ68_RS22870	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CLQ68_RS22875	COG0508	dehydrogenase complex catalyzes the overall conversion of
CLQ68_RS22880	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
CLQ68_RS22885	COG2186	Transcriptional regulator
CLQ68_RS22890	COG1113	amino acid transport
CLQ68_RS22895	COG2211	Major facilitator Superfamily
CLQ68_RS22900	COG3940	Belongs to the glycosyl hydrolase 43 family
CLQ68_RS22905	COG3725	Membrane protein required for beta-lactamase induction
CLQ68_RS22910	COG3023	N-Acetylmuramoyl-L-alanine amidase
CLQ68_RS22920	COG4969	Belongs to the N-Me-Phe pilin family
CLQ68_RS22925	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CLQ68_RS22930	COG1459	type II secretion system
CLQ68_RS22955	COG0494	nUDIX hydrolase
CLQ68_RS22975	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CLQ68_RS22980	COG0849	cell division
CLQ68_RS23005	COG0772	Belongs to the SEDS family
CLQ68_RS23020	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CLQ68_RS23025	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CLQ68_RS23030	COG0768	penicillin binding
CLQ68_RS23050	COG1609	Transcriptional regulator
CLQ68_RS23060	COG0028	Belongs to the TPP enzyme family
CLQ68_RS23110	COG0738	Major facilitator superfamily
CLQ68_RS23120	COG0583	DNA-binding transcription factor activity
CLQ68_RS23125	COG2271	Major facilitator Superfamily
CLQ68_RS23130	COG2814	Major facilitator Superfamily
CLQ68_RS23150	COG1178	ABC-type Fe3 transport system permease component
CLQ68_RS23160	COG0586	Pfam SNARE associated Golgi protein
CLQ68_RS23180	COG0235	Class ii aldolase
CLQ68_RS23185	COG0417	DNA replication proofreading
CLQ68_RS23195	COG0564	pseudouridine synthase activity
CLQ68_RS23210	COG3493	citrate carrier protein
CLQ68_RS23225	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CLQ68_RS23230	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CLQ68_RS23240	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
CLQ68_RS23290	COG0505	Belongs to the CarA family
CLQ68_RS23380	COG1047	Peptidyl-prolyl cis-trans
CLQ68_RS23395	COG0196	riboflavin kinase activity
CLQ68_RS23410	COG0583	DNA-binding transcription factor activity
CLQ68_RS23435	COG4735	regulation of single-species biofilm formation
CLQ68_RS23440	COG1584	GPR1 FUN34 yaaH family protein
CLQ68_RS23445	COG0477	Major facilitator Superfamily
CLQ68_RS23450	COG0521	Mo-molybdopterin cofactor biosynthetic process
CLQ68_RS23455	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CLQ68_RS23460	COG1115	amino acid carrier protein
CLQ68_RS23475	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
CLQ68_RS23485	COG0460	homoserine dehydrogenase
CLQ68_RS23485	COG0527	aspartate kinase activity
CLQ68_RS23495	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
CLQ68_RS23510	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS23515	COG4452	Inner membrane protein CreD
CLQ68_RS23520	COG2205	protein histidine kinase activity
CLQ68_RS23525	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS23530	COG3045	CreA protein
CLQ68_RS23535	COG2207	Transcriptional regulator
CLQ68_RS23535	COG3708	Transcriptional regulator
CLQ68_RS23555	COG0741	lytic transglycosylase activity
CLQ68_RS23560	COG0488	(ABC) transporter
CLQ68_RS23570	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CLQ68_RS23575	COG0560	Phosphoserine phosphatase
CLQ68_RS23585	COG3726	membrane protein affecting hemolysin expression
CLQ68_RS23615	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CLQ68_RS23620	COG0084	hydrolase, TatD family'
CLQ68_RS23625	COG4667	esterase of the alpha-beta hydrolase superfamily
CLQ68_RS23635	COG2823	Periplasmic or secreted lipoprotein
CLQ68_RS23645	COG1011	Hydrolase
CLQ68_RS23650	COG0456	acetyltransferase
CLQ68_RS23655	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
CLQ68_RS23685	COG3706	GGDEF domain
CLQ68_RS23690	COG4114	ferric iron reductase
CLQ68_RS23695	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS23695	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS23700	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CLQ68_RS23705	COG2197	response regulator
CLQ68_RS23710	COG2197	response regulator
CLQ68_RS23730	COG2966	Psort location CytoplasmicMembrane, score
CLQ68_RS23745	COG1484	DNA-dependent DNA replication
CLQ68_RS23760	COG5464	transposase or invertase
CLQ68_RS23770	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CLQ68_RS23775	COG3716	PTS system mannose fructose sorbose family IID component
CLQ68_RS23780	COG3715	PTS system
CLQ68_RS23795	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CLQ68_RS23795	COG3933	PFAM sigma-54 factor interaction domain-containing protein
CLQ68_RS23800	COG1214	PFAM Peptidase M22, glycoprotease
CLQ68_RS23800	COG0456	acetyltransferase
CLQ68_RS23810	COG1737	Transcriptional regulator
CLQ68_RS23815	COG0800	Aldolase
CLQ68_RS23820	COG3734	2-keto-3-deoxy-galactonokinase
CLQ68_RS23835	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
CLQ68_RS23865	COG1846	Transcriptional regulator
CLQ68_RS23870	COG0179	Fumarylacetoacetate (FAA) hydrolase
CLQ68_RS23880	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS23885	COG3384	dioxygenase
CLQ68_RS23895	COG3971	2-oxopent-4-enoate hydratase activity
CLQ68_RS23915	COG2368	4-hydroxyphenylacetate
CLQ68_RS23920	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CLQ68_RS23925	COG1966	Carbon starvation protein
CLQ68_RS23930	COG2879	small protein
CLQ68_RS23935	COG0523	cobalamin synthesis protein
CLQ68_RS23945	COG1012	belongs to the aldehyde dehydrogenase family
CLQ68_RS23950	COG5464	transposase or invertase
CLQ68_RS23955	COG1917	Cupin 2, conserved barrel domain protein
CLQ68_RS23955	COG2207	Transcriptional regulator
CLQ68_RS23965	COG2733	membrane
CLQ68_RS23980	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
CLQ68_RS23985	COG1924	4 iron, 4 sulfur cluster binding
CLQ68_RS24000	COG1566	PFAM secretion protein HlyD family protein
CLQ68_RS24010	COG5457	Domain of unknown function (DUF1127)
CLQ68_RS24015	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CLQ68_RS24030	COG0583	DNA-binding transcription factor activity
CLQ68_RS24035	COG2249	NAD(P)H dehydrogenase (quinone) activity
CLQ68_RS24045	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS24050	COG1129	ABC transporter
CLQ68_RS24055	COG1879	ABC-type sugar transport system periplasmic component
CLQ68_RS24065	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLQ68_RS24070	COG0842	Transport permease protein
CLQ68_RS24070	COG1129	ABC transporter
CLQ68_RS24075	COG0842	Transport permease protein
CLQ68_RS24110	COG2850	peptidyl-arginine hydroxylation
CLQ68_RS24125	COG5002	protein histidine kinase activity
CLQ68_RS24130	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS24135	COG1538	Outer membrane efflux protein
CLQ68_RS24140	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLQ68_RS24145	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CLQ68_RS24150	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CLQ68_RS24160	COG3040	lipid binding
CLQ68_RS24165	COG0789	Transcriptional regulator
CLQ68_RS24170	COG3631	Ketosteroid isomerase-related protein
CLQ68_RS24175	COG0300	oxidoreductase activity
CLQ68_RS24190	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CLQ68_RS24210	COG3272	Protein of unknown function (DUF1722)
CLQ68_RS24215	COG4580	involved in the transport of maltose and maltodextrins
CLQ68_RS24220	COG2115	Belongs to the xylose isomerase family
CLQ68_RS24225	COG2211	Major facilitator Superfamily
CLQ68_RS24230	COG3507	Belongs to the glycosyl hydrolase 43 family
CLQ68_RS24250	COG1216	Glycosyl transferase, family 2
CLQ68_RS24310	COG1401	restriction endodeoxyribonuclease activity
CLQ68_RS24340	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
CLQ68_RS24345	COG3039	Transposase
CLQ68_RS24350	COG0732	type I restriction modification DNA specificity domain
CLQ68_RS24355	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
CLQ68_RS24385	COG0582	viral genome integration into host DNA
CLQ68_RS24440	COG0582	viral genome integration into host DNA
CLQ68_RS24455	COG0288	reversible hydration of carbon dioxide
CLQ68_RS24460	COG0659	secondary active sulfate transmembrane transporter activity
CLQ68_RS24465	COG1064	alcohol dehydrogenase
CLQ68_RS24470	COG1175	transmembrane transport
CLQ68_RS24475	COG0395	ABC-type sugar transport system, permease component
CLQ68_RS24480	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CLQ68_RS24485	COG3842	ATPase activity
CLQ68_RS24500	COG1082	Xylose isomerase domain protein TIM barrel
CLQ68_RS24510	COG3962	Belongs to the TPP enzyme family
CLQ68_RS24515	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CLQ68_RS24520	COG1737	Transcriptional regulator
CLQ68_RS24520	COG0837	glucose binding
CLQ68_RS24535	COG3718	enzyme involved in inositol metabolism
CLQ68_RS24550	COG0433	COG0433 Predicted ATPase
CLQ68_RS24555	COG0795	lipopolysaccharide-transporting ATPase activity
CLQ68_RS24560	COG0795	lipopolysaccharide-transporting ATPase activity
CLQ68_RS24575	COG2927	DNA polymerase III (CHI subunit)
CLQ68_RS24580	COG0525	valine-tRNA ligase activity
CLQ68_RS24605	COG2188	Transcriptional regulator
CLQ68_RS24610	COG1288	antiporter activity
CLQ68_RS24615	COG1228	amidohydrolase
CLQ68_RS24620	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CLQ68_RS24625	COG2222	sugar isomerase
CLQ68_RS24630	COG2731	YhcH YjgK YiaL family protein
CLQ68_RS24675	COG1263	PTS System
CLQ68_RS24675	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CLQ68_RS24680	COG0366	Alpha amylase catalytic
CLQ68_RS24685	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLQ68_RS24690	COG1486	melibiose metabolic process
CLQ68_RS24710	COG0602	queuosine metabolic process
CLQ68_RS24715	COG2026	Addiction module toxin, RelE StbE family
CLQ68_RS24720	COG3077	Addiction module antitoxin, RelB DinJ family
CLQ68_RS24725	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CLQ68_RS24725	COG3711	transcriptional antiterminator
CLQ68_RS24730	COG2706	6-phosphogluconolactonase activity
CLQ68_RS24745	COG3964	amidohydrolase
CLQ68_RS24780	COG0312	modulator of DNA gyrase
CLQ68_RS24800	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CLQ68_RS24810	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS24815	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS24820	COG1129	ABC transporter
CLQ68_RS24825	COG1879	ABC-type sugar transport system periplasmic component
CLQ68_RS24845	COG2105	PFAM AIG2 family protein
CLQ68_RS24850	COG2911	Protein conserved in bacteria
CLQ68_RS24855	COG0729	surface antigen
CLQ68_RS24865	COG1253	flavin adenine dinucleotide binding
CLQ68_RS24880	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
CLQ68_RS24895	COG1733	regulation of RNA biosynthetic process
CLQ68_RS24900	COG0702	epimerase
CLQ68_RS24910	COG0697	spore germination
CLQ68_RS24920	COG1113	amino acid transport
CLQ68_RS24925	COG0545	Peptidyl-prolyl cis-trans isomerase
CLQ68_RS24930	COG3061	Opacity-associated protein A
CLQ68_RS24940	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CLQ68_RS24945	COG2965	DNA replication, synthesis of RNA primer
CLQ68_RS25005	COG1073	alpha beta
CLQ68_RS25010	COG3650	response to hydrogen peroxide
CLQ68_RS25020	COG1960	acyl-CoA dehydrogenase activity
CLQ68_RS25025	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CLQ68_RS25030	COG0557	exoribonuclease II activity
CLQ68_RS25045	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
CLQ68_RS25055	COG0330	HflC and HflK could
CLQ68_RS25060	COG0330	HflC and HflK could
CLQ68_RS25065	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CLQ68_RS25085	COG0860	N-Acetylmuramoyl-L-alanine amidase
CLQ68_RS25090	COG0802	atpase or kinase
CLQ68_RS25095	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CLQ68_RS25095	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CLQ68_RS25100	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CLQ68_RS25125	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CLQ68_RS25150	COG1511	domain protein
CLQ68_RS25150	COG3264	Mechanosensitive ion channel
CLQ68_RS25165	COG1053	succinate dehydrogenase
CLQ68_RS25170	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CLQ68_RS25190	COG2076	Multidrug Resistance protein
CLQ68_RS25195	COG5510	response to toxic substance
CLQ68_RS25210	COG1509	lysine 2,3-aminomutase activity
CLQ68_RS25215	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS25250	COG3188	usher protein
CLQ68_RS25285	COG0531	amino acid
CLQ68_RS25290	COG3030	protein affecting phage T7 exclusion by the F plasmid
CLQ68_RS25300	COG1027	Aspartate ammonia-lyase
CLQ68_RS25305	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CLQ68_RS25320	COG1309	transcriptional regulator
CLQ68_RS25355	COG0726	polysaccharide deacetylase
CLQ68_RS25355	COG1649	PFAM Uncharacterised BCR, COG1649
CLQ68_RS25360	COG1215	transferase activity, transferring glycosyl groups
CLQ68_RS25380	COG0861	Integral membrane protein TerC family
CLQ68_RS25410	COG1486	melibiose metabolic process
CLQ68_RS25420	COG2169	Transcriptional regulator
CLQ68_RS25435	COG2824	Alkylphosphonate utilization operon protein PhnA
CLQ68_RS25440	COG2764	glyoxalase bleomycin resistance protein dioxygenase
CLQ68_RS25445	COG2188	Transcriptional regulator
CLQ68_RS25450	COG3624	Phosphonate C-P lyase system protein PhnG
CLQ68_RS25455	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
CLQ68_RS25460	COG3626	phosphonate metabolism
CLQ68_RS25465	COG3627	carbon phosphorus lyase activity
CLQ68_RS25470	COG4107	phosphonate C-P lyase system protein PhnK
CLQ68_RS25475	COG4778	phosphonate C-P lyase system protein PhnL
CLQ68_RS25480	COG3454	Phosphonate metabolism
CLQ68_RS25490	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CLQ68_RS25500	COG0784	Response regulator, receiver
CLQ68_RS25500	COG4191	Histidine kinase
CLQ68_RS25505	COG1129	ABC transporter
CLQ68_RS25510	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS25545	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
CLQ68_RS25550	COG1301	dicarboxylic acid transport
CLQ68_RS25570	COG3162	membrane
CLQ68_RS25600	COG3539	Fimbrial protein
CLQ68_RS25605	COG1346	cytolysis
CLQ68_RS25610	COG1380	Effector of murein hydrolase LrgA
CLQ68_RS25615	COG0583	DNA-binding transcription factor activity
CLQ68_RS25620	COG0025	NhaP-type Na H and K H
CLQ68_RS25625	COG2252	PERMEase
CLQ68_RS25630	COG0625	glutathione transferase activity
CLQ68_RS25635	COG0789	Transcriptional regulator
CLQ68_RS25645	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CLQ68_RS25680	COG1234	tRNA 3'-trailer cleavage
CLQ68_RS25685	COG1609	Transcriptional regulator
CLQ68_RS25690	COG0483	inositol monophosphate 1-phosphatase activity
CLQ68_RS25705	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CLQ68_RS25725	COG4771	TonB-dependent receptor
CLQ68_RS25730	COG0741	lytic transglycosylase activity
CLQ68_RS25750	COG2315	Protein conserved in bacteria
CLQ68_RS25755	COG0432	Pfam Uncharacterised protein family UPF0047
CLQ68_RS25770	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CLQ68_RS25775	COG0305	Participates in initiation and elongation during chromosome replication
CLQ68_RS25790	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CLQ68_RS25800	COG0735	belongs to the Fur family
CLQ68_RS25805	COG3237	CsbD-like
CLQ68_RS25810	COG0534	Mate efflux family protein
CLQ68_RS25820	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CLQ68_RS25895	COG0251	oxidation-reduction process
CLQ68_RS25905	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CLQ68_RS25925	COG0527	aspartate kinase activity
CLQ68_RS25975	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
CLQ68_RS25985	COG0456	acetyltransferase
CLQ68_RS26025	COG0151	Belongs to the GarS family
CLQ68_RS26035	COG4191	Histidine kinase
CLQ68_RS26040	COG3678	ATP-independent chaperone mediated protein folding
CLQ68_RS26075	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
CLQ68_RS26090	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CLQ68_RS26095	COG2104	thiamine diphosphate biosynthetic process
CLQ68_RS26115	COG3706	GGDEF domain
CLQ68_RS26125	COG1447	Phosphotransferase system cellobiose-specific component IIA
CLQ68_RS26130	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CLQ68_RS26170	COG0250	Participates in transcription elongation, termination and antitermination
CLQ68_RS26250	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
CLQ68_RS26260	COG1739	Uncharacterized protein family UPF0029
CLQ68_RS26305	COG0805	protein transport
CLQ68_RS26325	COG3165	ubiquinone biosynthetic process from chorismate
CLQ68_RS26355	COG0583	DNA-binding transcription factor activity
CLQ68_RS26370	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CLQ68_RS26380	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CLQ68_RS26385	COG0473	3-isopropylmalate dehydrogenase activity
CLQ68_RS26390	COG1049	propionate catabolic process, 2-methylcitrate cycle
CLQ68_RS26400	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
CLQ68_RS26410	COG2301	Belongs to the HpcH HpaI aldolase family
CLQ68_RS26415	COG3051	citrate lyase alpha subunit
CLQ68_RS26450	COG0641	radical SAM
CLQ68_RS26460	COG2149	membrane
CLQ68_RS26465	COG2188	Transcriptional regulator
CLQ68_RS26485	COG0583	DNA-binding transcription factor activity
CLQ68_RS26490	COG0697	spore germination
CLQ68_RS26495	COG0561	phosphatase activity
CLQ68_RS26500	COG2267	carboxylic ester hydrolase activity
CLQ68_RS26505	COG1280	lysine exporter protein (LysE YggA)
CLQ68_RS26515	COG1280	lysine exporter protein (LysE YggA)
CLQ68_RS26550	COG0210	DNA helicase
CLQ68_RS26555	COG1011	Hydrolase
CLQ68_RS26585	COG3072	Adenylate cyclase
CLQ68_RS26600	COG2959	enzyme of heme biosynthesis
CLQ68_RS26605	COG3071	HemY protein
CLQ68_RS26650	COG2244	polysaccharide biosynthetic process
CLQ68_RS26655	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CLQ68_RS26660	COG0456	acetyltransferase
CLQ68_RS26665	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CLQ68_RS26670	COG1088	dTDP-glucose 4,6-dehydratase activity
CLQ68_RS26675	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CLQ68_RS26680	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CLQ68_RS26690	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CLQ68_RS26695	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CLQ68_RS26705	COG3118	belongs to the thioredoxin family
CLQ68_RS26735	COG1811	Na channel or pump
CLQ68_RS26745	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CLQ68_RS26750	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CLQ68_RS26760	COG0583	DNA-binding transcription factor activity
CLQ68_RS26765	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CLQ68_RS26780	COG3978	acetolactate synthase activity
CLQ68_RS26800	COG3085	chromosome segregation
CLQ68_RS26875	COG0583	DNA-binding transcription factor activity
CLQ68_RS26900	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CLQ68_RS26915	COG3443	Belongs to the bacterial solute-binding protein 9 family
CLQ68_RS26920	COG2207	Transcriptional regulator
CLQ68_RS26930	COG0371	Dehydrogenase
CLQ68_RS26940	COG0583	DNA-binding transcription factor activity
CLQ68_RS26950	COG0737	Belongs to the 5'-nucleotidase family
CLQ68_RS26960	COG0527	aspartate kinase activity
CLQ68_RS26960	COG0460	homoserine dehydrogenase
CLQ68_RS26965	COG0626	cystathionine gamma-synthase activity
CLQ68_RS26980	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CLQ68_RS26985	COG1609	Transcriptional regulator
CLQ68_RS26990	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CLQ68_RS27005	COG1575	Belongs to the MenA family. Type 1 subfamily
CLQ68_RS27025	COG3678	ATP-independent chaperone mediated protein folding
CLQ68_RS27030	COG0745	RESPONSE REGULATOR receiver
CLQ68_RS27035	COG2205	protein histidine kinase activity
CLQ68_RS27040	COG2258	MOSC domain
CLQ68_RS27045	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CLQ68_RS27090	COG1129	ABC transporter
CLQ68_RS27095	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS27100	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS27105	COG1454	alcohol dehydrogenase
CLQ68_RS27115	COG2211	Major facilitator Superfamily
CLQ68_RS27155	COG0243	molybdopterin cofactor binding
CLQ68_RS27155	COG3383	formate dehydrogenase (NAD+) activity
CLQ68_RS27160	COG0243	molybdopterin cofactor binding
CLQ68_RS27160	COG3383	formate dehydrogenase (NAD+) activity
CLQ68_RS27165	COG0437	4 iron, 4 sulfur cluster binding
CLQ68_RS27170	COG2864	formate dehydrogenase
CLQ68_RS27185	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CLQ68_RS27195	COG0456	acetyltransferase
CLQ68_RS27210	COG1011	Hydrolase
CLQ68_RS27230	COG3852	Histidine kinase
CLQ68_RS27240	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CLQ68_RS27270	COG0204	Acyl-transferase
CLQ68_RS27280	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
CLQ68_RS27285	COG3084	Protein conserved in bacteria
CLQ68_RS27295	COG1763	Mo-molybdopterin cofactor biosynthetic process
CLQ68_RS27330	COG2186	Transcriptional regulator
CLQ68_RS27335	COG0477	Major facilitator Superfamily
CLQ68_RS27340	COG1609	Transcriptional regulator
CLQ68_RS27345	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CLQ68_RS27355	COG1172	Belongs to the binding-protein-dependent transport system permease family
CLQ68_RS27360	COG1129	ABC transporter
CLQ68_RS27390	COG1522	sequence-specific DNA binding
CLQ68_RS27395	COG0716	FMN binding
CLQ68_RS27410	COG3312	ion transport
CLQ68_RS27460	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CLQ68_RS27465	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CLQ68_RS27470	COG0573	inorganic phosphate transmembrane transporter activity
CLQ68_RS27475	COG0581	inorganic phosphate transmembrane transporter activity
CLQ68_RS27480	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CLQ68_RS27485	COG0704	Plays a role in the regulation of phosphate uptake
CLQ68_RS27500	COG2382	esterase
CLQ68_RS27505	COG0363	glucosamine-6-phosphate deaminase activity
CLQ68_RS27510	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CLQ68_RS27520	COG2252	PERMEase
CLQ68_RS27525	COG0431	NADPH-dependent FMN reductase
CLQ68_RS27530	COG2091	lysine biosynthetic process via aminoadipic acid
CLQ68_RS27560	COG0759	Could be involved in insertion of integral membrane proteins into the membrane