locus-tag class description CLQ46_RS00005 PF01051 Initiator Replication protein CLQ46_RS00015 PF00589 Phage integrase family CLQ46_RS00020 PF00990 Diguanylate cyclase, GGDEF domain CLQ46_RS00020 PF13185 GAF domain CLQ46_RS00025 PF00563 EAL domain CLQ46_RS00025 PF00990 Diguanylate cyclase, GGDEF domain CLQ46_RS00025 PF00498 FHA domain CLQ46_RS00035 PF13737 Transposase DDE domain CLQ46_RS00045 PF00563 EAL domain CLQ46_RS00045 PF12792 CSS motif domain associated with EAL CLQ46_RS00050 PF10011 Predicted membrane protein (DUF2254) CLQ46_RS00055 PF02028 BCCT, betaine/carnitine/choline family transporter CLQ46_RS00090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS00090 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS00090 PF00672 HAMP domain CLQ46_RS00095 PF00486 Transcriptional regulatory protein, C terminal CLQ46_RS00095 PF00072 Response regulator receiver domain CLQ46_RS00100 PF02321 Outer membrane efflux protein CLQ46_RS00105 PF11604 Copper binding periplasmic protein CusF CLQ46_RS00110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ46_RS00115 PF00873 AcrB/AcrD/AcrF family CLQ46_RS00125 PF04945 YHS domain CLQ46_RS00135 PF08525 Opacity-associated protein A N-terminal motif CLQ46_RS00135 PF01476 LysM domain CLQ46_RS00135 PF01551 Peptidase family M23 CLQ46_RS00145 PF07731 Multicopper oxidase CLQ46_RS00145 PF07732 Multicopper oxidase CLQ46_RS00145 PF00394 Multicopper oxidase CLQ46_RS00150 PF05275 Copper resistance protein B precursor (CopB) CLQ46_RS00155 PF04234 CopC domain CLQ46_RS00160 PF05425 Copper resistance protein D CLQ46_RS00165 PF00486 Transcriptional regulatory protein, C terminal CLQ46_RS00165 PF00072 Response regulator receiver domain CLQ46_RS00170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS00170 PF00672 HAMP domain CLQ46_RS00170 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS00190 PF00230 Major intrinsic protein CLQ46_RS00205 PF03358 NADPH-dependent FMN reductase CLQ46_RS00230 PF03960 ArsC family CLQ46_RS00235 PF02040 Arsenical pump membrane protein CLQ46_RS00240 PF02374 Anion-transporting ATPase CLQ46_RS00245 PF06953 Arsenical resistance operon trans-acting repressor ArsD CLQ46_RS00250 PF01022 Bacterial regulatory protein, arsR family CLQ46_RS00275 PF05321 Haemolysin expression modulating protein CLQ46_RS00310 PF01435 Peptidase family M48 CLQ46_RS00330 PF10431 C-terminal, D2-small domain, of ClpB protein CLQ46_RS00330 PF02861 Clp amino terminal domain, pathogenicity island component CLQ46_RS00330 PF17871 AAA lid domain CLQ46_RS00330 PF07724 AAA domain (Cdc48 subfamily) CLQ46_RS00330 PF00004 ATPase family associated with various cellular activities (AAA) CLQ46_RS00335 PF00011 Hsp20/alpha crystallin family CLQ46_RS00340 PF12728 Helix-turn-helix domain CLQ46_RS00360 PF05598 Transposase domain (DUF772) CLQ46_RS00360 PF01609 Transposase DDE domain CLQ46_RS00380 PF00005 ABC transporter CLQ46_RS00390 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS00395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLQ46_RS00395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLQ46_RS00400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS00400 PF03466 LysR substrate binding domain CLQ46_RS00410 PF13610 DDE domain CLQ46_RS00420 PF02371 Transposase IS116/IS110/IS902 family CLQ46_RS00420 PF01548 Transposase CLQ46_RS00425 PF13610 DDE domain CLQ46_RS00450 PF02522 Aminoglycoside 3-N-acetyltransferase CLQ46_RS00470 PF13610 DDE domain CLQ46_RS00480 PF13495 Phage integrase, N-terminal SAM-like domain CLQ46_RS00480 PF00589 Phage integrase family CLQ46_RS00485 PF00186 Dihydrofolate reductase CLQ46_RS00495 PF13427 Domain of unknown function (DUF4111) CLQ46_RS00500 PF00893 Small Multidrug Resistance protein CLQ46_RS00505 PF00809 Pterin binding enzyme CLQ46_RS00525 PF13610 DDE domain CLQ46_RS00540 PF00239 Resolvase, N terminal domain CLQ46_RS00540 PF02796 Helix-turn-helix domain of resolvase CLQ46_RS00545 PF13610 DDE domain CLQ46_RS00550 PF12729 Four helix bundle sensory module for signal transduction CLQ46_RS00550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CLQ46_RS00550 PF00672 HAMP domain CLQ46_RS00580 PF02387 IncFII RepA protein family CLQ46_RS00590 PF10723 Replication regulatory protein RepB CLQ46_RS00600 PF01320 Colicin immunity protein / pyocin immunity protein CLQ46_RS00605 PF06958 S-type Pyocin CLQ46_RS00620 PF12602 Fertility inhibition protein N terminal CLQ46_RS00620 PF04352 ProQ/FINO family CLQ46_RS00625 PF05857 TraX protein CLQ46_RS00630 PF18340 DNA relaxase TraI 2B/2B-like domain CLQ46_RS00630 PF08751 TrwC relaxase CLQ46_RS00630 PF18272 single-stranded DNA binding TraI N-terminal subdomain CLQ46_RS00630 PF07057 DNA helicase TraI CLQ46_RS00635 PF10412 Type IV secretion-system coupling protein DNA-binding domain CLQ46_RS00635 PF12615 F sex factor protein N terminal CLQ46_RS00640 PF05818 Enterobacterial TraT complement resistance protein CLQ46_RS00650 PF07916 TraG-like protein, N-terminal region CLQ46_RS00655 PF06122 Conjugative relaxosome accessory transposon protein CLQ46_RS00665 PF13728 F plasmid transfer operon protein CLQ46_RS00670 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) CLQ46_RS00675 PF13728 F plasmid transfer operon protein CLQ46_RS00690 PF11100 Conjugal transfer protein TrbE CLQ46_RS00695 PF06986 Type-1V conjugative transfer system mating pair stabilisation CLQ46_RS00700 PF09673 Type-F conjugative transfer system pilin assembly protein CLQ46_RS00705 PF06834 TraU protein CLQ46_RS00710 PF12477 Sex factor F TraW protein N terminal CLQ46_RS00715 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) CLQ46_RS00720 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer CLQ46_RS00760 PF09676 Type IV conjugative transfer system lipoprotein (TraV) CLQ46_RS00770 PF03743 Bacterial conjugation TrbI-like protein CLQ46_RS00775 PF06586 TraK protein CLQ46_RS00780 PF05309 TraE protein CLQ46_RS00785 PF07178 TraL protein CLQ46_RS00790 PF05513 TraA CLQ46_RS00795 PF05509 TraY domain CLQ46_RS00805 PF05261 TraM protein, DNA-binding CLQ46_RS00810 PF01464 Transglycosylase SLT domain CLQ46_RS00820 PF06067 Domain of unknown function (DUF932) CLQ46_RS00840 PF01381 Helix-turn-helix CLQ46_RS00885 PF03230 Antirestriction protein CLQ46_RS00905 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLQ46_RS00915 PF00717 Peptidase S24-like CLQ46_RS00920 PF13438 Domain of unknown function (DUF4113) CLQ46_RS00920 PF11799 impB/mucB/samB family C-terminal domain CLQ46_RS00920 PF00817 impB/mucB/samB family CLQ46_RS00945 PF02195 ParB-like nuclease domain CLQ46_RS00945 PF18090 Centromere-binding protein HTH domain CLQ46_RS00950 PF13614 AAA domain CLQ46_RS00955 PF01051 Initiator Replication protein CLQ46_RS00975 PF00154 recA bacterial DNA recombination protein CLQ46_RS00985 PF01367 5'-3' exonuclease, C-terminal SAM fold CLQ46_RS00985 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CLQ46_RS01015 PF02811 PHP domain CLQ46_RS01015 PF14579 Helix-hairpin-helix motif CLQ46_RS01015 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CLQ46_RS01015 PF07733 Bacterial DNA polymerase III alpha NTPase domain CLQ46_RS01025 PF07733 Bacterial DNA polymerase III alpha NTPase domain CLQ46_RS01025 PF02811 PHP domain CLQ46_RS01025 PF14579 Helix-hairpin-helix motif CLQ46_RS01025 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CLQ46_RS01040 PF06213 Cobalamin biosynthesis protein CobT CLQ46_RS01040 PF11775 Cobalamin biosynthesis protein CobT VWA domain CLQ46_RS01065 PF00462 Glutaredoxin CLQ46_RS01075 PF02562 PhoH-like protein CLQ46_RS01285 PF09383 NIL domain CLQ46_RS01285 PF00005 ABC transporter CLQ46_RS01290 PF17762 HTH domain found in ParB protein CLQ46_RS01290 PF02195 ParB-like nuclease domain CLQ46_RS01295 PF17762 HTH domain found in ParB protein CLQ46_RS01295 PF02195 ParB-like nuclease domain CLQ46_RS01300 PF00270 DEAD/DEAH box helicase CLQ46_RS01300 PF00271 Helicase conserved C-terminal domain CLQ46_RS01300 PF17191 RecG wedge domain CLQ46_RS01390 PF12161 HsdM N-terminal domain CLQ46_RS01390 PF02384 N-6 DNA Methylase CLQ46_RS01395 PF01420 Type I restriction modification DNA specificity domain CLQ46_RS01400 PF12008 Type I restriction and modification enzyme - subunit R C terminal CLQ46_RS01400 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CLQ46_RS01400 PF18766 SWI2/SNF2 ATPase CLQ46_RS01435 PF00075 RNase H CLQ46_RS01470 PF01121 Dephospho-CoA kinase CLQ46_RS01475 PF00186 Dihydrofolate reductase CLQ46_RS01485 PF00303 Thymidylate synthase CLQ46_RS01495 PF00268 Ribonucleotide reductase, small chain CLQ46_RS01500 PF03477 ATP cone domain CLQ46_RS01500 PF00317 Ribonucleotide reductase, all-alpha domain CLQ46_RS01500 PF02867 Ribonucleotide reductase, barrel domain CLQ46_RS01530 PF01381 Helix-turn-helix CLQ46_RS01570 PF01815 Rop protein CLQ46_RS01595 PF02402 Lysis protein CLQ46_RS01600 PF03513 Cloacin immunity protein CLQ46_RS01605 PF09000 Cytotoxic CLQ46_RS01605 PF03515 Colicin-like bacteriocin tRNase domain CLQ46_RS01605 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 CLQ46_RS01615 PF06519 TolA C-terminal CLQ46_RS01630 PF05713 Bacterial mobilisation protein (MobC) CLQ46_RS01665 PF08048 Tap RepA1 leader peptide CLQ46_RS01680 PF02517 CPBP intramembrane metalloprotease CLQ46_RS01685 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CLQ46_RS01710 PF13610 DDE domain CLQ46_RS01725 PF13610 DDE domain CLQ46_RS01740 PF13610 DDE domain CLQ46_RS01750 PF02796 Helix-turn-helix domain of resolvase CLQ46_RS01750 PF00239 Resolvase, N terminal domain CLQ46_RS01760 PF07091 Ribosomal RNA methyltransferase (FmrO) CLQ46_RS01770 PF13610 DDE domain CLQ46_RS01785 PF00589 Phage integrase family CLQ46_RS01820 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CLQ46_RS01825 PF01850 PIN domain CLQ46_RS01830 PF02463 RecF/RecN/SMC N terminal domain CLQ46_RS01875 PF02796 Helix-turn-helix domain of resolvase CLQ46_RS01875 PF00239 Resolvase, N terminal domain CLQ46_RS01880 PF01526 Tn3 transposase DDE domain CLQ46_RS01880 PF13700 Domain of unknown function (DUF4158) CLQ46_RS01895 PF08220 DeoR-like helix-turn-helix domain CLQ46_RS01895 PF00455 DeoR C terminal sensor domain CLQ46_RS01905 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CLQ46_RS01905 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CLQ46_RS01920 PF13610 DDE domain CLQ46_RS01925 PF01609 Transposase DDE domain CLQ46_RS01925 PF05598 Transposase domain (DUF772) CLQ46_RS01945 PF04754 Putative transposase, YhgA-like CLQ46_RS01955 PF02796 Helix-turn-helix domain of resolvase CLQ46_RS01955 PF00239 Resolvase, N terminal domain CLQ46_RS01960 PF13614 AAA domain CLQ46_RS01960 PF18607 ParA helix turn helix domain CLQ46_RS01965 PF08775 ParB family CLQ46_RS01965 PF02195 ParB-like nuclease domain CLQ46_RS01975 PF13438 Domain of unknown function (DUF4113) CLQ46_RS01975 PF11799 impB/mucB/samB family C-terminal domain CLQ46_RS01975 PF00817 impB/mucB/samB family CLQ46_RS01980 PF00717 Peptidase S24-like CLQ46_RS01985 PF02586 SOS response associated peptidase (SRAP) CLQ46_RS01990 PF01555 DNA methylase CLQ46_RS02000 PF07128 Protein of unknown function (DUF1380) CLQ46_RS02020 PF06440 DNA polymerase III, theta subunit CLQ46_RS02030 PF06006 Bacterial protein of unknown function (DUF905) CLQ46_RS02040 PF06290 Plasmid SOS inhibition protein (PsiB) CLQ46_RS02045 PF06952 PsiA protein CLQ46_RS02060 PF13610 DDE domain CLQ46_RS02075 PF13610 DDE domain CLQ46_RS02080 PF00302 Chloramphenicol acetyltransferase CLQ46_RS02090 PF13610 DDE domain CLQ46_RS02100 PF02796 Helix-turn-helix domain of resolvase CLQ46_RS02100 PF00239 Resolvase, N terminal domain CLQ46_RS02115 PF02371 Transposase IS116/IS110/IS902 family CLQ46_RS02115 PF01548 Transposase CLQ46_RS02120 PF13700 Domain of unknown function (DUF4158) CLQ46_RS02120 PF01526 Tn3 transposase DDE domain CLQ46_RS02130 PF13610 DDE domain CLQ46_RS02140 PF05857 TraX protein CLQ46_RS02145 PF04352 ProQ/FINO family CLQ46_RS02145 PF12602 Fertility inhibition protein N terminal CLQ46_RS02170 PF01848 Hok/gef family CLQ46_RS02175 PF10723 Replication regulatory protein RepB CLQ46_RS02185 PF11638 DnaA N-terminal domain CLQ46_RS02185 PF08299 Bacterial dnaA protein helix-turn-helix CLQ46_RS02185 PF00308 Bacterial dnaA protein CLQ46_RS02190 PF02768 DNA polymerase III beta subunit, C-terminal domain CLQ46_RS02190 PF00712 DNA polymerase III beta subunit, N-terminal domain CLQ46_RS02190 PF02767 DNA polymerase III beta subunit, central domain CLQ46_RS02195 PF02463 RecF/RecN/SMC N terminal domain CLQ46_RS02200 PF00986 DNA gyrase B subunit, carboxyl terminus CLQ46_RS02200 PF00204 DNA gyrase B CLQ46_RS02200 PF18053 DNA gyrase B subunit insert domain CLQ46_RS02200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS02200 PF01751 Toprim domain CLQ46_RS02220 PF07729 FCD domain CLQ46_RS02220 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS02225 PF05035 2-keto-3-deoxy-galactonokinase CLQ46_RS02230 PF01081 KDPG and KHG aldolase CLQ46_RS02240 PF01609 Transposase DDE domain CLQ46_RS02240 PF05598 Transposase domain (DUF772) CLQ46_RS02250 PF01609 Transposase DDE domain CLQ46_RS02250 PF05598 Transposase domain (DUF772) CLQ46_RS02260 PF07690 Major Facilitator Superfamily CLQ46_RS02265 PF12566 Protein of unknown function (DUF3748) CLQ46_RS02265 PF07676 WD40-like Beta Propeller Repeat CLQ46_RS02270 PF07119 Protein of unknown function (DUF1375) CLQ46_RS02275 PF00011 Hsp20/alpha crystallin family CLQ46_RS02280 PF00011 Hsp20/alpha crystallin family CLQ46_RS02290 PF06826 Predicted Permease Membrane Region CLQ46_RS02290 PF02080 TrkA-C domain CLQ46_RS02295 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS02295 PF07702 UTRA domain CLQ46_RS02300 PF02378 Phosphotransferase system, EIIC CLQ46_RS02300 PF00367 phosphotransferase system, EIIB CLQ46_RS02305 PF11975 Family 4 glycosyl hydrolase C-terminal domain CLQ46_RS02305 PF02056 Family 4 glycosyl hydrolase CLQ46_RS02310 PF02656 Domain of unknown function (DUF202) CLQ46_RS02315 PF02656 Domain of unknown function (DUF202) CLQ46_RS02325 PF00291 Pyridoxal-phosphate dependent enzyme CLQ46_RS02330 PF02447 GntP family permease CLQ46_RS02335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS02335 PF03466 LysR substrate binding domain CLQ46_RS02340 PF07690 Major Facilitator Superfamily CLQ46_RS02365 PF00205 Thiamine pyrophosphate enzyme, central domain CLQ46_RS02365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ46_RS02365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLQ46_RS02370 PF01842 ACT domain CLQ46_RS02375 PF00196 Bacterial regulatory proteins, luxR family CLQ46_RS02375 PF00072 Response regulator receiver domain CLQ46_RS02380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS02380 PF07730 Histidine kinase CLQ46_RS02380 PF05231 MASE1 CLQ46_RS02385 PF07690 Major Facilitator Superfamily CLQ46_RS02390 PF07690 Major Facilitator Superfamily CLQ46_RS02395 PF06711 Protein of unknown function (DUF1198) CLQ46_RS02410 PF07690 Major Facilitator Superfamily CLQ46_RS02420 PF00266 Aminotransferase class-V CLQ46_RS02430 PF07702 UTRA domain CLQ46_RS02430 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS02435 PF01547 Bacterial extracellular solute-binding protein CLQ46_RS02440 PF00005 ABC transporter CLQ46_RS02440 PF08402 TOBE domain CLQ46_RS02445 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS02460 PF02264 LamB porin CLQ46_RS02465 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CLQ46_RS02470 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ46_RS02470 PF02378 Phosphotransferase system, EIIC CLQ46_RS02475 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ46_RS02480 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS02485 PF07690 Major Facilitator Superfamily CLQ46_RS02490 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit CLQ46_RS02490 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CLQ46_RS02495 PF03466 LysR substrate binding domain CLQ46_RS02495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS02500 PF02585 GlcNAc-PI de-N-acetylase CLQ46_RS02505 PF03737 Aldolase/RraA CLQ46_RS02510 PF04303 PrpF protein CLQ46_RS02525 PF00892 EamA-like transporter family CLQ46_RS02530 PF00367 phosphotransferase system, EIIB CLQ46_RS02530 PF02378 Phosphotransferase system, EIIC CLQ46_RS02535 PF13580 SIS domain CLQ46_RS02540 PF07690 Major Facilitator Superfamily CLQ46_RS02545 PF02321 Outer membrane efflux protein CLQ46_RS02550 PF00873 AcrB/AcrD/AcrF family CLQ46_RS02555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ46_RS02555 PF00529 HlyD membrane-fusion protein of T1SS CLQ46_RS02565 PF00583 Acetyltransferase (GNAT) family CLQ46_RS02575 PF00440 Bacterial regulatory proteins, tetR family CLQ46_RS02580 PF07690 Major Facilitator Superfamily CLQ46_RS02585 PF03466 LysR substrate binding domain CLQ46_RS02585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS02605 PF12833 Helix-turn-helix domain CLQ46_RS02610 PF03180 NLPA lipoprotein CLQ46_RS02620 PF00293 NUDIX domain CLQ46_RS02625 PF12706 Beta-lactamase superfamily domain CLQ46_RS02630 PF01965 DJ-1/PfpI family CLQ46_RS02635 PF00107 Zinc-binding dehydrogenase CLQ46_RS02635 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS02650 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS02650 PF00107 Zinc-binding dehydrogenase CLQ46_RS02675 PF13802 Galactose mutarotase-like CLQ46_RS02675 PF01055 Glycosyl hydrolases family 31 CLQ46_RS02685 PF11975 Family 4 glycosyl hydrolase C-terminal domain CLQ46_RS02685 PF02056 Family 4 glycosyl hydrolase CLQ46_RS02690 PF02378 Phosphotransferase system, EIIC CLQ46_RS02690 PF00367 phosphotransferase system, EIIB CLQ46_RS02695 PF05170 AsmA family CLQ46_RS02700 PF00860 Permease family CLQ46_RS02705 PF03616 Sodium/glutamate symporter CLQ46_RS02710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ46_RS02710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ46_RS02715 PF00230 Major intrinsic protein CLQ46_RS02720 PF06005 Cell division protein ZapB CLQ46_RS02730 PF02611 CDP-diacylglycerol pyrophosphatase CLQ46_RS02740 PF00121 Triosephosphate isomerase CLQ46_RS02745 PF07305 Protein of unknown function (DUF1454) CLQ46_RS02750 PF05656 Protein of unknown function (DUF805) CLQ46_RS02755 PF00175 Oxidoreductase NAD-binding domain CLQ46_RS02755 PF00970 Oxidoreductase FAD-binding domain CLQ46_RS02760 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CLQ46_RS02765 PF17191 RecG wedge domain CLQ46_RS02765 PF00270 DEAD/DEAH box helicase CLQ46_RS02765 PF00271 Helicase conserved C-terminal domain CLQ46_RS02770 PF12105 SpoU, rRNA methylase, C-terminal CLQ46_RS02770 PF00588 SpoU rRNA Methylase family CLQ46_RS02775 PF04607 Region found in RelA / SpoT proteins CLQ46_RS02775 PF13291 ACT domain CLQ46_RS02775 PF02824 TGS domain CLQ46_RS02780 PF01192 RNA polymerase Rpb6 CLQ46_RS02785 PF00625 Guanylate kinase CLQ46_RS02790 PF03120 NAD-dependent DNA ligase OB-fold domain CLQ46_RS02790 PF01653 NAD-dependent DNA ligase adenylation domain CLQ46_RS02795 PF03458 UPF0126 domain CLQ46_RS02805 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CLQ46_RS02805 PF12833 Helix-turn-helix domain CLQ46_RS02805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CLQ46_RS02805 PF02805 Metal binding domain of Ada CLQ46_RS02815 PF08340 Domain of unknown function (DUF1732) CLQ46_RS02815 PF03755 YicC-like family, N-terminal region CLQ46_RS02825 PF05598 Transposase domain (DUF772) CLQ46_RS02825 PF01609 Transposase DDE domain CLQ46_RS02840 PF00005 ABC transporter CLQ46_RS02850 PF01138 3' exoribonuclease family, domain 1 CLQ46_RS02850 PF03725 3' exoribonuclease family, domain 2 CLQ46_RS02855 PF00156 Phosphoribosyl transferase domain CLQ46_RS02860 PF00440 Bacterial regulatory proteins, tetR family CLQ46_RS02865 PF00692 dUTPase CLQ46_RS02870 PF02441 Flavoprotein CLQ46_RS02870 PF04127 DNA / pantothenate metabolism flavoprotein CLQ46_RS02875 PF04002 RadC-like JAB domain CLQ46_RS02880 PF00830 Ribosomal L28 family CLQ46_RS02885 PF00471 Ribosomal protein L33 CLQ46_RS02890 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CLQ46_RS02890 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CLQ46_RS02890 PF06827 Zinc finger found in FPG and IleRS CLQ46_RS02895 PF01467 Cytidylyltransferase-like CLQ46_RS02900 PF00535 Glycosyl transferase family 2 CLQ46_RS02905 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CLQ46_RS02910 PF00535 Glycosyl transferase family 2 CLQ46_RS02915 PF00534 Glycosyl transferases group 1 CLQ46_RS02915 PF13439 Glycosyltransferase Family 4 CLQ46_RS02920 PF13439 Glycosyltransferase Family 4 CLQ46_RS02920 PF00534 Glycosyl transferases group 1 CLQ46_RS02925 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CLQ46_RS02940 PF04932 O-Antigen ligase CLQ46_RS02950 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CLQ46_RS02955 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CLQ46_RS02960 PF01370 NAD dependent epimerase/dehydratase family CLQ46_RS02965 PF00155 Aminotransferase class I and II CLQ46_RS02970 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS02970 PF00107 Zinc-binding dehydrogenase CLQ46_RS02975 PF00535 Glycosyl transferase family 2 CLQ46_RS02980 PF04748 Divergent polysaccharide deacetylase CLQ46_RS02985 PF01551 Peptidase family M23 CLQ46_RS02990 PF01676 Metalloenzyme superfamily CLQ46_RS02990 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CLQ46_RS02995 PF00581 Rhodanese-like domain CLQ46_RS03000 PF00462 Glutaredoxin CLQ46_RS03005 PF02556 Preprotein translocase subunit SecB CLQ46_RS03010 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CLQ46_RS03010 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CLQ46_RS03015 PF00132 Bacterial transferase hexapeptide (six repeats) CLQ46_RS03015 PF06426 Serine acetyltransferase, N-terminal CLQ46_RS03020 PF00588 SpoU rRNA Methylase family CLQ46_RS03025 PF01070 FMN-dependent dehydrogenase CLQ46_RS03030 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS03030 PF07729 FCD domain CLQ46_RS03035 PF02652 L-lactate permease CLQ46_RS03040 PF10928 Protein of unknown function (DUF2810) CLQ46_RS03050 PF05068 Mannitol repressor CLQ46_RS03055 PF01232 Mannitol dehydrogenase Rossmann domain CLQ46_RS03055 PF08125 Mannitol dehydrogenase C-terminal domain CLQ46_RS03060 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ46_RS03060 PF02378 Phosphotransferase system, EIIC CLQ46_RS03060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ46_RS03065 PF11742 Protein of unknown function (DUF3302) CLQ46_RS03070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ46_RS03070 PF00529 HlyD membrane-fusion protein of T1SS CLQ46_RS03075 PF13417 Glutathione S-transferase, N-terminal domain CLQ46_RS03075 PF00043 Glutathione S-transferase, C-terminal domain CLQ46_RS03080 PF12390 Selenocysteine synthase N terminal CLQ46_RS03080 PF03841 L-seryl-tRNA selenium transferase CLQ46_RS03085 PF00009 Elongation factor Tu GTP binding domain CLQ46_RS03085 PF03144 Elongation factor Tu domain 2 CLQ46_RS03085 PF09106 Elongation factor SelB, winged helix CLQ46_RS03085 PF09107 Elongation factor SelB, winged helix CLQ46_RS03090 PF01614 Bacterial transcriptional regulator CLQ46_RS03090 PF09339 IclR helix-turn-helix domain CLQ46_RS03095 PF12800 4Fe-4S binding domain CLQ46_RS03095 PF13247 4Fe-4S dicluster domain CLQ46_RS03100 PF00155 Aminotransferase class I and II CLQ46_RS03105 PF00128 Alpha amylase, catalytic domain CLQ46_RS03115 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CLQ46_RS03120 PF12833 Helix-turn-helix domain CLQ46_RS03125 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS03130 PF00005 ABC transporter CLQ46_RS03135 PF13407 Periplasmic binding protein domain CLQ46_RS03150 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ46_RS03150 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ46_RS03155 PF05360 yiaA/B two helix domain CLQ46_RS03160 PF05360 yiaA/B two helix domain CLQ46_RS03165 PF01757 Acyltransferase family CLQ46_RS03170 PF13983 YsaB-like lipoprotein CLQ46_RS03180 PF02091 Glycyl-tRNA synthetase alpha subunit CLQ46_RS03185 PF05746 DALR anticodon binding domain CLQ46_RS03185 PF02092 Glycyl-tRNA synthetase beta subunit CLQ46_RS03195 PF01848 Hok/gef family CLQ46_RS03200 PF12848 ABC transporter CLQ46_RS03200 PF00005 ABC transporter CLQ46_RS03205 PF00313 'Cold-shock' DNA-binding domain CLQ46_RS03210 PF01381 Helix-turn-helix CLQ46_RS03215 PF07690 Major Facilitator Superfamily CLQ46_RS03225 PF11254 Protein of unknown function (DUF3053) CLQ46_RS03230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLQ46_RS03230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLQ46_RS03235 PF07690 Major Facilitator Superfamily CLQ46_RS03240 PF00294 pfkB family carbohydrate kinase CLQ46_RS03250 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS03255 PF13488 Glycine zipper CLQ46_RS03255 PF00691 OmpA family CLQ46_RS03260 PF01568 Molydopterin dinucleotide binding domain CLQ46_RS03260 PF18364 Molybdopterin oxidoreductase N-terminal domain CLQ46_RS03260 PF00384 Molybdopterin oxidoreductase CLQ46_RS03265 PF00583 Acetyltransferase (GNAT) family CLQ46_RS03270 PF03352 Methyladenine glycosylase CLQ46_RS03275 PF03797 Autotransporter beta-domain CLQ46_RS03280 PF07690 Major Facilitator Superfamily CLQ46_RS03285 PF08019 Phosphoethanolamine transferase EptA/EptB CLQ46_RS03285 PF00884 Sulfatase CLQ46_RS03320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ46_RS03325 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS03330 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS03330 PF12911 N-terminal TM domain of oligopeptide transport permease C CLQ46_RS03335 PF00005 ABC transporter CLQ46_RS03335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ46_RS03340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ46_RS03340 PF00005 ABC transporter CLQ46_RS03360 PF03552 Cellulose synthase CLQ46_RS03360 PF00535 Glycosyl transferase family 2 CLQ46_RS03360 PF07238 PilZ domain CLQ46_RS03360 PF03170 Bacterial cellulose synthase subunit CLQ46_RS03365 PF03170 Bacterial cellulose synthase subunit CLQ46_RS03370 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CLQ46_RS03380 PF01270 Glycosyl hydrolases family 8 CLQ46_RS03385 PF11658 Cellulose biosynthesis protein BcsG CLQ46_RS03390 PF11120 Cellulose biosynthesis protein BcsF CLQ46_RS03395 PF10995 Cellulose biosynthesis GIL CLQ46_RS03400 PF10945 Cellulose biosynthesis protein BcsR CLQ46_RS03405 PF06564 Cellulose biosynthesis protein BcsQ CLQ46_RS03410 PF00535 Glycosyl transferase family 2 CLQ46_RS03410 PF07238 PilZ domain CLQ46_RS03415 PF03170 Bacterial cellulose synthase subunit CLQ46_RS03420 PF01270 Glycosyl hydrolases family 8 CLQ46_RS03425 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CLQ46_RS03430 PF00672 HAMP domain CLQ46_RS03430 PF00990 Diguanylate cyclase, GGDEF domain CLQ46_RS03430 PF17154 Gammaproteobacterial periplasmic sensor domain CLQ46_RS03430 PF00563 EAL domain CLQ46_RS03440 PF00375 Sodium:dicarboxylate symporter family CLQ46_RS03445 PF00675 Insulinase (Peptidase family M16) CLQ46_RS03445 PF05193 Peptidase M16 inactive domain CLQ46_RS03450 PF00294 pfkB family carbohydrate kinase CLQ46_RS03460 PF05170 AsmA family CLQ46_RS03465 PF07690 Major Facilitator Superfamily CLQ46_RS03465 PF00083 Sugar (and other) transporter CLQ46_RS03470 PF03631 Virulence factor BrkB CLQ46_RS03475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS03475 PF03466 LysR substrate binding domain CLQ46_RS03485 PF13302 Acetyltransferase (GNAT) domain CLQ46_RS03490 PF01204 Trehalase CLQ46_RS03495 PF00465 Iron-containing alcohol dehydrogenase CLQ46_RS03505 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ46_RS03505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLQ46_RS03510 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CLQ46_RS03515 PF01569 PAP2 superfamily CLQ46_RS03520 PF01432 Peptidase family M3 CLQ46_RS03525 PF04445 Putative SAM-dependent methyltransferase CLQ46_RS03530 PF00854 POT family CLQ46_RS03535 PF00582 Universal stress protein family CLQ46_RS03540 PF10625 Universal stress protein B (UspB) CLQ46_RS03545 PF01384 Phosphate transporter family CLQ46_RS03555 PF01769 Divalent cation transporter CLQ46_RS03555 PF03448 MgtE intracellular N domain CLQ46_RS03555 PF00571 CBS domain CLQ46_RS03560 PF01402 Ribbon-helix-helix protein, copG family CLQ46_RS03560 PF08753 NikR C terminal nickel binding domain CLQ46_RS03565 PF00005 ABC transporter CLQ46_RS03570 PF00005 ABC transporter CLQ46_RS03575 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS03580 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS03585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ46_RS03595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS03595 PF03466 LysR substrate binding domain CLQ46_RS03600 PF05870 Phenolic acid decarboxylase (PAD) CLQ46_RS03605 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLQ46_RS03610 PF00535 Glycosyl transferase family 2 CLQ46_RS03615 PF02911 Formyl transferase, C-terminal domain CLQ46_RS03615 PF01370 NAD dependent epimerase/dehydratase family CLQ46_RS03615 PF00551 Formyl transferase CLQ46_RS03620 PF01522 Polysaccharide deacetylase CLQ46_RS03625 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CLQ46_RS03630 PF00892 EamA-like transporter family CLQ46_RS03640 PF01594 AI-2E family transporter CLQ46_RS03645 PF07690 Major Facilitator Superfamily CLQ46_RS03650 PF08786 DcrB CLQ46_RS03655 PF02592 Putative vitamin uptake transporter CLQ46_RS03660 PF01206 Sulfurtransferase TusA CLQ46_RS03665 PF00403 Heavy-metal-associated domain CLQ46_RS03670 PF07947 YhhN family CLQ46_RS03675 PF10694 Protein of unknown function (DUF2500) CLQ46_RS03680 PF06611 Protein of unknown function (DUF1145) CLQ46_RS03690 PF00448 SRP54-type protein, GTPase domain CLQ46_RS03690 PF02881 SRP54-type protein, helical bundle domain CLQ46_RS03695 PF00005 ABC transporter CLQ46_RS03700 PF18075 FtsX extracellular domain CLQ46_RS03700 PF02687 FtsX-like permease family CLQ46_RS03705 PF04542 Sigma-70 region 2 CLQ46_RS03705 PF04545 Sigma-70, region 4 CLQ46_RS03710 PF00155 Aminotransferase class I and II CLQ46_RS03710 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS03715 PF00202 Aminotransferase class-III CLQ46_RS03725 PF13458 Periplasmic binding protein CLQ46_RS03730 PF12568 Acetyltransferase (GNAT) domain, PanZ CLQ46_RS03740 PF13458 Periplasmic binding protein CLQ46_RS03745 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS03750 PF11862 Domain of unknown function (DUF3382) CLQ46_RS03750 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS03755 PF00005 ABC transporter CLQ46_RS03755 PF12399 Branched-chain amino acid ATP-binding cassette transporter CLQ46_RS03760 PF00005 ABC transporter CLQ46_RS03765 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CLQ46_RS03775 PF13416 Bacterial extracellular solute-binding protein CLQ46_RS03780 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS03785 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS03790 PF00005 ABC transporter CLQ46_RS03790 PF17912 MalK OB fold domain CLQ46_RS03795 PF03009 Glycerophosphoryl diester phosphodiesterase family CLQ46_RS03800 PF10956 Protein of unknown function (DUF2756) CLQ46_RS03810 PF00583 Acetyltransferase (GNAT) family CLQ46_RS03820 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLQ46_RS03820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ46_RS03825 PF17954 Quercetinase C-terminal cupin domain CLQ46_RS03825 PF02678 Pirin CLQ46_RS03830 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CLQ46_RS03830 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS03835 PF01202 Shikimate kinase CLQ46_RS03840 PF02447 GntP family permease CLQ46_RS03850 PF02774 Semialdehyde dehydrogenase, dimerisation domain CLQ46_RS03850 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLQ46_RS03855 PF02806 Alpha amylase, C-terminal all-beta domain CLQ46_RS03855 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CLQ46_RS03855 PF00128 Alpha amylase, catalytic domain CLQ46_RS03860 PF18390 Glycogen debranching enzyme C-terminal domain CLQ46_RS03860 PF00128 Alpha amylase, catalytic domain CLQ46_RS03860 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CLQ46_RS03865 PF00483 Nucleotidyl transferase CLQ46_RS03870 PF00534 Glycosyl transferases group 1 CLQ46_RS03870 PF08323 Starch synthase catalytic domain CLQ46_RS03875 PF00343 Carbohydrate phosphorylase CLQ46_RS03890 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CLQ46_RS03890 PF01266 FAD dependent oxidoreductase CLQ46_RS03895 PF00581 Rhodanese-like domain CLQ46_RS03900 PF01694 Rhomboid family CLQ46_RS03900 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CLQ46_RS03905 PF08220 DeoR-like helix-turn-helix domain CLQ46_RS03905 PF00455 DeoR C terminal sensor domain CLQ46_RS03910 PF17874 MalT-like TPR region CLQ46_RS03910 PF00196 Bacterial regulatory proteins, luxR family CLQ46_RS03920 PF00343 Carbohydrate phosphorylase CLQ46_RS03925 PF02446 4-alpha-glucanotransferase CLQ46_RS03930 PF02447 GntP family permease CLQ46_RS03935 PF01521 Iron-sulphur cluster biosynthesis CLQ46_RS03935 PF01106 NifU-like domain CLQ46_RS03940 PF00156 Phosphoribosyl transferase domain CLQ46_RS03945 PF00561 alpha/beta hydrolase fold CLQ46_RS03955 PF09012 FeoC like transcriptional regulator CLQ46_RS03960 PF07670 Nucleoside recognition CLQ46_RS03960 PF17910 FeoB cytosolic helical domain CLQ46_RS03960 PF07664 Ferrous iron transport protein B C terminus CLQ46_RS03960 PF02421 Ferrous iron transport protein B CLQ46_RS03965 PF04023 FeoA domain CLQ46_RS03970 PF17674 HHH domain CLQ46_RS03970 PF00575 S1 RNA binding domain CLQ46_RS03970 PF09371 Tex-like protein N-terminal domain CLQ46_RS03970 PF16921 Tex protein YqgF-like domain CLQ46_RS03975 PF03449 Transcription elongation factor, N-terminal CLQ46_RS03975 PF01272 Transcription elongation factor, GreA/GreB, C-term CLQ46_RS03980 PF00072 Response regulator receiver domain CLQ46_RS03980 PF00486 Transcriptional regulatory protein, C terminal CLQ46_RS03985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS03985 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS03985 PF00672 HAMP domain CLQ46_RS03990 PF01293 Phosphoenolpyruvate carboxykinase CLQ46_RS03995 PF01430 Hsp33 protein CLQ46_RS04000 PF01479 S4 domain CLQ46_RS04005 PF13419 Haloacid dehalogenase-like hydrolase CLQ46_RS04010 PF07095 Intracellular growth attenuator protein IgaA CLQ46_RS04015 PF00293 NUDIX domain CLQ46_RS04020 PF00905 Penicillin binding protein transpeptidase domain CLQ46_RS04020 PF00912 Transglycosylase CLQ46_RS04020 PF17092 Penicillin-binding protein OB-like domain CLQ46_RS04045 PF03958 Bacterial type II/III secretion system short domain CLQ46_RS04045 PF00263 Bacterial type II and III secretion system protein CLQ46_RS04055 PF01202 Shikimate kinase CLQ46_RS04060 PF01761 3-dehydroquinate synthase CLQ46_RS04065 PF05036 Sporulation related domain CLQ46_RS04070 PF02086 D12 class N6 adenine-specific DNA methyltransferase CLQ46_RS04075 PF00834 Ribulose-phosphate 3 epimerase family CLQ46_RS04080 PF13419 Haloacid dehalogenase-like hydrolase CLQ46_RS04085 PF00579 tRNA synthetases class I (W and Y) CLQ46_RS04090 PF14824 Sirohaem biosynthesis protein central CLQ46_RS04090 PF10414 Sirohaem synthase dimerisation region CLQ46_RS04090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLQ46_RS04095 PF13806 Rieske-like [2Fe-2S] domain CLQ46_RS04100 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ46_RS04100 PF04324 BFD-like [2Fe-2S] binding domain CLQ46_RS04100 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CLQ46_RS04100 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CLQ46_RS04100 PF18267 Rubredoxin NAD+ reductase C-terminal domain CLQ46_RS04105 PF07969 Amidohydrolase family CLQ46_RS04110 PF07690 Major Facilitator Superfamily CLQ46_RS04115 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CLQ46_RS04120 PF10832 Protein of unknown function (DUF2559) CLQ46_RS04125 PF02661 Fic/DOC family CLQ46_RS04130 PF00117 Glutamine amidotransferase class-I CLQ46_RS04135 PF00202 Aminotransferase class-III CLQ46_RS04140 PF12805 FUSC-like inner membrane protein yccS CLQ46_RS04145 PF00027 Cyclic nucleotide-binding domain CLQ46_RS04145 PF13545 Crp-like helix-turn-helix domain CLQ46_RS04155 PF02566 OsmC-like protein CLQ46_RS04160 PF00485 Phosphoribulokinase / Uridine kinase family CLQ46_RS04165 PF06794 Uncharacterised protein family (UPF0270) CLQ46_RS04170 PF00561 alpha/beta hydrolase fold CLQ46_RS04180 PF12848 ABC transporter CLQ46_RS04180 PF00005 ABC transporter CLQ46_RS04190 PF02525 Flavodoxin-like fold CLQ46_RS04195 PF02254 TrkA-N domain CLQ46_RS04195 PF00999 Sodium/hydrogen exchanger family CLQ46_RS04200 PF09526 Probable metal-binding protein (DUF2387) CLQ46_RS04205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CLQ46_RS04210 PF04102 SlyX CLQ46_RS04215 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CLQ46_RS04215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CLQ46_RS04220 PF08348 YheO-like PAS domain CLQ46_RS04220 PF13309 HTH domain CLQ46_RS04225 PF02635 DsrE/DsrF-like family CLQ46_RS04230 PF02635 DsrE/DsrF-like family CLQ46_RS04235 PF04077 DsrH like protein CLQ46_RS04240 PF00164 Ribosomal protein S12/S23 CLQ46_RS04245 PF00177 Ribosomal protein S7p/S5e CLQ46_RS04250 PF03144 Elongation factor Tu domain 2 CLQ46_RS04250 PF00009 Elongation factor Tu GTP binding domain CLQ46_RS04250 PF03764 Elongation factor G, domain IV CLQ46_RS04250 PF14492 Elongation Factor G, domain II CLQ46_RS04250 PF00679 Elongation factor G C-terminus CLQ46_RS04255 PF03143 Elongation factor Tu C-terminal domain CLQ46_RS04255 PF00009 Elongation factor Tu GTP binding domain CLQ46_RS04255 PF03144 Elongation factor Tu domain 2 CLQ46_RS04265 PF04324 BFD-like [2Fe-2S] binding domain CLQ46_RS04270 PF00210 Ferritin-like domain CLQ46_RS04275 PF01478 Type IV leader peptidase family CLQ46_RS04280 PF00338 Ribosomal protein S10p/S20e CLQ46_RS04285 PF00297 Ribosomal protein L3 CLQ46_RS04290 PF00573 Ribosomal protein L4/L1 family CLQ46_RS04295 PF00276 Ribosomal protein L23 CLQ46_RS04300 PF00181 Ribosomal Proteins L2, RNA binding domain CLQ46_RS04300 PF03947 Ribosomal Proteins L2, C-terminal domain CLQ46_RS04305 PF00203 Ribosomal protein S19 CLQ46_RS04310 PF00237 Ribosomal protein L22p/L17e CLQ46_RS04315 PF00189 Ribosomal protein S3, C-terminal domain CLQ46_RS04315 PF07650 KH domain CLQ46_RS04320 PF00252 Ribosomal protein L16p/L10e CLQ46_RS04325 PF00831 Ribosomal L29 protein CLQ46_RS04330 PF00366 Ribosomal protein S17 CLQ46_RS04335 PF00238 Ribosomal protein L14p/L23e CLQ46_RS04340 PF00467 KOW motif CLQ46_RS04340 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CLQ46_RS04345 PF00673 ribosomal L5P family C-terminus CLQ46_RS04345 PF00281 Ribosomal protein L5 CLQ46_RS04350 PF00253 Ribosomal protein S14p/S29e CLQ46_RS04355 PF00410 Ribosomal protein S8 CLQ46_RS04360 PF00347 Ribosomal protein L6 CLQ46_RS04365 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CLQ46_RS04370 PF03719 Ribosomal protein S5, C-terminal domain CLQ46_RS04370 PF00333 Ribosomal protein S5, N-terminal domain CLQ46_RS04375 PF00327 Ribosomal protein L30p/L7e CLQ46_RS04380 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CLQ46_RS04385 PF00344 SecY translocase CLQ46_RS04390 PF00444 Ribosomal protein L36 CLQ46_RS04395 PF00416 Ribosomal protein S13/S18 CLQ46_RS04400 PF00411 Ribosomal protein S11 CLQ46_RS04405 PF00163 Ribosomal protein S4/S9 N-terminal domain CLQ46_RS04405 PF01479 S4 domain CLQ46_RS04410 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CLQ46_RS04410 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CLQ46_RS04410 PF01000 RNA polymerase Rpb3/RpoA insert domain CLQ46_RS04415 PF01196 Ribosomal protein L17 CLQ46_RS04420 PF09350 Domain of unknown function (DUF1992) CLQ46_RS04425 PF13411 MerR HTH family regulatory protein CLQ46_RS04430 PF03889 Alternative ribosome-rescue factor A CLQ46_RS04435 PF01741 Large-conductance mechanosensitive channel, MscL CLQ46_RS04440 PF02080 TrkA-C domain CLQ46_RS04440 PF02254 TrkA-N domain CLQ46_RS04445 PF01189 16S rRNA methyltransferase RsmB/F CLQ46_RS04445 PF01029 NusB family CLQ46_RS04450 PF02911 Formyl transferase, C-terminal domain CLQ46_RS04450 PF00551 Formyl transferase CLQ46_RS04455 PF01327 Polypeptide deformylase CLQ46_RS04460 PF02481 DNA recombination-mediator protein A CLQ46_RS04460 PF17782 DprA winged helix domain CLQ46_RS04465 PF04361 Protein of unknown function (DUF494) CLQ46_RS04470 PF01396 Topoisomerase DNA binding C4 zinc finger CLQ46_RS04475 PF01300 Telomere recombination CLQ46_RS04480 PF08501 Shikimate dehydrogenase substrate binding domain CLQ46_RS04480 PF01488 Shikimate / quinate 5-dehydrogenase CLQ46_RS04480 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CLQ46_RS04485 PF07369 Protein of unknown function (DUF1488) CLQ46_RS04490 PF00132 Bacterial transferase hexapeptide (six repeats) CLQ46_RS04530 PF00873 AcrB/AcrD/AcrF family CLQ46_RS04535 PF00529 HlyD membrane-fusion protein of T1SS CLQ46_RS04535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ46_RS04540 PF08361 MAATS-type transcriptional repressor, C-terminal region CLQ46_RS04540 PF00440 Bacterial regulatory proteins, tetR family CLQ46_RS04545 PF13356 Arm DNA-binding domain CLQ46_RS04545 PF00589 Phage integrase family CLQ46_RS04545 PF14659 Phage integrase, N-terminal SAM-like domain CLQ46_RS04560 PF08346 AntA/AntB antirepressor CLQ46_RS04560 PF10548 P22AR C-terminal domain CLQ46_RS04650 PF03354 Phage Terminase CLQ46_RS04660 PF02954 Bacterial regulatory protein, Fis family CLQ46_RS04665 PF01207 Dihydrouridine synthase (Dus) CLQ46_RS04680 PF00474 Sodium:solute symporter family CLQ46_RS04685 PF06196 Protein of unknown function (DUF997) CLQ46_RS04690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLQ46_RS04690 PF00289 Biotin carboxylase, N-terminal domain CLQ46_RS04690 PF02785 Biotin carboxylase C-terminal domain CLQ46_RS04695 PF00364 Biotin-requiring enzyme CLQ46_RS04705 PF01220 Dehydroquinase class II CLQ46_RS04710 PF01794 Ferric reductase like transmembrane component CLQ46_RS04715 PF00174 Oxidoreductase molybdopterin binding domain CLQ46_RS04725 PF00990 Diguanylate cyclase, GGDEF domain CLQ46_RS04725 PF00563 EAL domain CLQ46_RS04725 PF17157 Gammaproteobacterial periplasmic sensor domain CLQ46_RS04740 PF04085 rod shape-determining protein MreC CLQ46_RS04745 PF04093 rod shape-determining protein MreD CLQ46_RS04750 PF02545 Maf-like protein CLQ46_RS04755 PF10150 Ribonuclease E/G family CLQ46_RS04755 PF00575 S1 RNA binding domain CLQ46_RS04760 PF13502 AsmA-like C-terminal region CLQ46_RS04760 PF13116 Protein of unknown function CLQ46_RS04765 PF01523 Putative modulator of DNA gyrase CLQ46_RS04770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS04770 PF03466 LysR substrate binding domain CLQ46_RS04775 PF07869 Protein of unknown function (DUF1656) CLQ46_RS04780 PF13533 Biotin-lipoyl like CLQ46_RS04785 PF04632 Fusaric acid resistance protein family CLQ46_RS04790 PF01337 Barstar (barnase inhibitor) CLQ46_RS04795 PF07338 Protein of unknown function (DUF1471) CLQ46_RS04800 PF07338 Protein of unknown function (DUF1471) CLQ46_RS04805 PF02863 Arginine repressor, C-terminal domain CLQ46_RS04805 PF01316 Arginine repressor, DNA binding domain CLQ46_RS04810 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CLQ46_RS04810 PF00056 lactate/malate dehydrogenase, NAD binding domain CLQ46_RS04815 PF13180 PDZ domain CLQ46_RS04820 PF00595 PDZ domain CLQ46_RS04820 PF13180 PDZ domain CLQ46_RS04825 PF06295 Protein of unknown function (DUF1043) CLQ46_RS04830 PF03969 AFG1-like ATPase CLQ46_RS04835 PF00572 Ribosomal protein L13 CLQ46_RS04840 PF00380 Ribosomal protein S9/S16 CLQ46_RS04850 PF02798 Glutathione S-transferase, N-terminal domain CLQ46_RS04850 PF00043 Glutathione S-transferase, C-terminal domain CLQ46_RS04855 PF04386 Stringent starvation protein B CLQ46_RS04860 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CLQ46_RS04865 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ46_RS04865 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLQ46_RS04870 PF00310 Glutamine amidotransferases class-II CLQ46_RS04870 PF04898 Glutamate synthase central domain CLQ46_RS04870 PF01645 Conserved region in glutamate synthase CLQ46_RS04870 PF01493 GXGXG motif CLQ46_RS04880 PF16199 Radical_SAM C-terminal domain CLQ46_RS04880 PF04055 Radical SAM superfamily CLQ46_RS04885 PF07690 Major Facilitator Superfamily CLQ46_RS04890 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS04890 PF00107 Zinc-binding dehydrogenase CLQ46_RS04895 PF03786 D-mannonate dehydratase (UxuA) CLQ46_RS04900 PF00989 PAS fold CLQ46_RS04900 PF18415 Histidine kinase receptor ArcB trans-membrane domain CLQ46_RS04900 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS04900 PF00072 Response regulator receiver domain CLQ46_RS04900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS04900 PF01627 Hpt domain CLQ46_RS04910 PF00912 Transglycosylase CLQ46_RS04915 PF00381 PTS HPr component phosphorylation site CLQ46_RS04920 PF03668 P-loop ATPase protein family CLQ46_RS04925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ46_RS04930 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CLQ46_RS04935 PF00309 Sigma-54 factor, Activator interacting domain (AID) CLQ46_RS04935 PF04552 Sigma-54, DNA binding domain CLQ46_RS04935 PF04963 Sigma-54 factor, core binding domain CLQ46_RS04940 PF00005 ABC transporter CLQ46_RS04940 PF12399 Branched-chain amino acid ATP-binding cassette transporter CLQ46_RS04945 PF03968 OstA-like protein CLQ46_RS04950 PF06835 Lipopolysaccharide-assembly, LptC-related CLQ46_RS04960 PF01380 SIS domain CLQ46_RS04960 PF00571 CBS domain CLQ46_RS04965 PF01699 Sodium/calcium exchanger protein CLQ46_RS04975 PF00005 ABC transporter CLQ46_RS04980 PF02405 Permease MlaE CLQ46_RS04985 PF02470 MlaD protein CLQ46_RS04990 PF05494 MlaC protein CLQ46_RS04995 PF13466 STAS domain CLQ46_RS05000 PF01722 BolA-like protein CLQ46_RS05005 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLQ46_RS05010 PF13693 Winged helix-turn-helix DNA-binding CLQ46_RS05015 PF00348 Polyprenyl synthetase CLQ46_RS05020 PF00829 Ribosomal prokaryotic L21 protein CLQ46_RS05025 PF01016 Ribosomal L27 protein CLQ46_RS05030 PF00892 EamA-like transporter family CLQ46_RS05035 PF01926 50S ribosome-binding GTPase CLQ46_RS05035 PF01018 GTP1/OBG CLQ46_RS05040 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CLQ46_RS05045 PF03449 Transcription elongation factor, N-terminal CLQ46_RS05045 PF01272 Transcription elongation factor, GreA/GreB, C-term CLQ46_RS05050 PF01985 CRS1 / YhbY (CRM) domain CLQ46_RS05055 PF01728 FtsJ-like methyltransferase CLQ46_RS05060 PF00004 ATPase family associated with various cellular activities (AAA) CLQ46_RS05060 PF01434 Peptidase family M41 CLQ46_RS05060 PF17862 AAA+ lid domain CLQ46_RS05060 PF06480 FtsH Extracellular CLQ46_RS05065 PF00809 Pterin binding enzyme CLQ46_RS05070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CLQ46_RS05070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CLQ46_RS05070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CLQ46_RS05070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CLQ46_RS05075 PF03840 Preprotein translocase SecG subunit CLQ46_RS05090 PF07437 YfaZ precursor CLQ46_RS05095 PF15977 Winged helix-turn-helix DNA binding CLQ46_RS05100 PF00764 Arginosuccinate synthase CLQ46_RS05110 PF02576 RimP N-terminal domain CLQ46_RS05110 PF17384 RimP C-terminal SH3 domain CLQ46_RS05115 PF00575 S1 RNA binding domain CLQ46_RS05115 PF08529 NusA N-terminal domain CLQ46_RS05115 PF13184 NusA-like KH domain CLQ46_RS05120 PF04760 Translation initiation factor IF-2, N-terminal region CLQ46_RS05120 PF08364 Bacterial translation initiation factor IF-2 associated region CLQ46_RS05120 PF11987 Translation-initiation factor 2 CLQ46_RS05120 PF00009 Elongation factor Tu GTP binding domain CLQ46_RS05125 PF02033 Ribosome-binding factor A CLQ46_RS05130 PF16198 tRNA pseudouridylate synthase B C-terminal domain CLQ46_RS05130 PF09157 Pseudouridine synthase II TruB, C-terminal CLQ46_RS05130 PF01509 TruB family pseudouridylate synthase (N terminal domain) CLQ46_RS05135 PF00312 Ribosomal protein S15 CLQ46_RS05145 PF00013 KH domain CLQ46_RS05145 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CLQ46_RS05145 PF00575 S1 RNA binding domain CLQ46_RS05145 PF01138 3' exoribonuclease family, domain 1 CLQ46_RS05145 PF03725 3' exoribonuclease family, domain 2 CLQ46_RS05150 PF07719 Tetratricopeptide repeat CLQ46_RS05150 PF13181 Tetratricopeptide repeat CLQ46_RS05160 PF00271 Helicase conserved C-terminal domain CLQ46_RS05160 PF12343 Cold shock protein DEAD box A CLQ46_RS05160 PF00270 DEAD/DEAH box helicase CLQ46_RS05160 PF03880 DbpA RNA binding domain CLQ46_RS05165 PF03222 Tryptophan/tyrosine permease family CLQ46_RS05170 PF00296 Luciferase-like monooxygenase CLQ46_RS05175 PF01136 Peptidase family U32 CLQ46_RS05180 PF01136 Peptidase family U32 CLQ46_RS05185 PF02036 SCP-2 sterol transfer family CLQ46_RS05190 PF13508 Acetyltransferase (GNAT) domain CLQ46_RS05195 PF01541 GIY-YIG catalytic domain CLQ46_RS05205 PF01965 DJ-1/PfpI family CLQ46_RS05210 PF13460 NAD(P)H-binding CLQ46_RS05215 PF03773 Predicted permease CLQ46_RS05220 PF04972 BON domain CLQ46_RS05225 PF13580 SIS domain CLQ46_RS05230 PF02021 Uncharacterised protein family UPF0102 CLQ46_RS05235 PF04348 LppC putative lipoprotein CLQ46_RS05240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLQ46_RS05245 PF02661 Fic/DOC family CLQ46_RS05245 PF13784 Fic/DOC family N-terminal CLQ46_RS05250 PF08220 DeoR-like helix-turn-helix domain CLQ46_RS05255 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS05255 PF00107 Zinc-binding dehydrogenase CLQ46_RS05260 PF03611 PTS system sugar-specific permease component CLQ46_RS05265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ46_RS05270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ46_RS05275 PF08013 Tagatose 6 phosphate kinase CLQ46_RS05280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ46_RS05280 PF00381 PTS HPr component phosphorylation site CLQ46_RS05285 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ46_RS05285 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ46_RS05290 PF00294 pfkB family carbohydrate kinase CLQ46_RS05295 PF01116 Fructose-bisphosphate aldolase class-II CLQ46_RS05300 PF08220 DeoR-like helix-turn-helix domain CLQ46_RS05300 PF00455 DeoR C terminal sensor domain CLQ46_RS05305 PF00294 pfkB family carbohydrate kinase CLQ46_RS05310 PF08666 SAF domain CLQ46_RS05310 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CLQ46_RS05315 PF07690 Major Facilitator Superfamily CLQ46_RS05320 PF03328 HpcH/HpaI aldolase/citrate lyase family CLQ46_RS05325 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CLQ46_RS05325 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CLQ46_RS05330 PF02595 Glycerate kinase family CLQ46_RS05350 PF17954 Quercetinase C-terminal cupin domain CLQ46_RS05350 PF02678 Pirin CLQ46_RS05355 PF03466 LysR substrate binding domain CLQ46_RS05355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS05360 PF05656 Protein of unknown function (DUF805) CLQ46_RS05365 PF13409 Glutathione S-transferase, N-terminal domain CLQ46_RS05370 PF07681 DoxX CLQ46_RS05375 PF13997 YqjK-like protein CLQ46_RS05380 PF07332 Putative Actinobacterial Holin-X, holin superfamily III CLQ46_RS05385 PF05957 Bacterial protein of unknown function (DUF883) CLQ46_RS05390 PF06476 Protein of unknown function (DUF1090) CLQ46_RS05395 PF13721 SecD export protein N-terminal TM region CLQ46_RS05400 PF09335 SNARE associated Golgi protein CLQ46_RS05405 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS05405 PF07729 FCD domain CLQ46_RS05410 PF07690 Major Facilitator Superfamily CLQ46_RS05415 PF02614 Glucuronate isomerase CLQ46_RS05420 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CLQ46_RS05420 PF08666 SAF domain CLQ46_RS05425 PF10688 Bacterial inner membrane protein CLQ46_RS05430 PF00375 Sodium:dicarboxylate symporter family CLQ46_RS05435 PF03741 Integral membrane protein TerC family CLQ46_RS05440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ46_RS05445 PF01863 Protein of unknown function DUF45 CLQ46_RS05460 PF05175 Methyltransferase small domain CLQ46_RS05465 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ46_RS05465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLQ46_RS05470 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ46_RS05470 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ46_RS05475 PF04198 Putative sugar-binding domain CLQ46_RS05480 PF00005 ABC transporter CLQ46_RS05485 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS05490 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS05495 PF13407 Periplasmic binding protein domain CLQ46_RS05500 PF01791 DeoC/LacD family aldolase CLQ46_RS05505 PF03992 Antibiotic biosynthesis monooxygenase CLQ46_RS05510 PF00202 Aminotransferase class-III CLQ46_RS05520 PF03551 Transcriptional regulator PadR-like family CLQ46_RS05525 PF08021 Siderophore-interacting FAD-binding domain CLQ46_RS05525 PF04954 Siderophore-interacting protein CLQ46_RS05530 PF02733 Dak1 domain CLQ46_RS05530 PF02734 DAK2 domain CLQ46_RS05535 PF03610 PTS system fructose IIA component CLQ46_RS05535 PF05524 PEP-utilising enzyme, N-terminal CLQ46_RS05535 PF00391 PEP-utilising enzyme, mobile domain CLQ46_RS05535 PF00381 PTS HPr component phosphorylation site CLQ46_RS05540 PF02734 DAK2 domain CLQ46_RS05545 PF02733 Dak1 domain CLQ46_RS05565 PF00465 Iron-containing alcohol dehydrogenase CLQ46_RS05570 PF02954 Bacterial regulatory protein, Fis family CLQ46_RS05570 PF00989 PAS fold CLQ46_RS05570 PF00158 Sigma-54 interaction domain CLQ46_RS05575 PF01923 Cobalamin adenosyltransferase CLQ46_RS05580 PF02288 Dehydratase medium subunit CLQ46_RS05585 PF00465 Iron-containing alcohol dehydrogenase CLQ46_RS05590 PF03928 Haem-degrading CLQ46_RS05595 PF02286 Dehydratase large subunit CLQ46_RS05600 PF02288 Dehydratase medium subunit CLQ46_RS05605 PF02287 Dehydratase small subunit CLQ46_RS05610 PF18427 DD-reactivating factor swiveling domain CLQ46_RS05610 PF08841 Diol dehydratase reactivase ATPase-like domain CLQ46_RS05615 PF00230 Major intrinsic protein CLQ46_RS05620 PF06411 HdeA/HdeB family CLQ46_RS05625 PF03729 Short repeat of unknown function (DUF308) CLQ46_RS05630 PF10938 YfdX protein CLQ46_RS05635 PF00072 Response regulator receiver domain CLQ46_RS05635 PF01627 Hpt domain CLQ46_RS05635 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ46_RS05635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS05635 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS05640 PF00196 Bacterial regulatory proteins, luxR family CLQ46_RS05640 PF00072 Response regulator receiver domain CLQ46_RS05660 PF03167 Uracil DNA glycosylase superfamily CLQ46_RS05665 PF04545 Sigma-70, region 4 CLQ46_RS05665 PF04542 Sigma-70 region 2 CLQ46_RS05665 PF00140 Sigma-70 factor, region 1.2 CLQ46_RS05665 PF03979 Sigma-70 factor, region 1.1 CLQ46_RS05665 PF04539 Sigma-70 region 3 CLQ46_RS05665 PF04546 Sigma-70, non-essential region CLQ46_RS05670 PF01807 CHC2 zinc finger CLQ46_RS05670 PF08278 DNA primase DnaG DnaB-binding CLQ46_RS05670 PF10410 DnaB-helicase binding domain of primase CLQ46_RS05670 PF08275 DNA primase catalytic core, N-terminal domain CLQ46_RS05675 PF01165 Ribosomal protein S21 CLQ46_RS05685 PF00814 Glycoprotease family CLQ46_RS05695 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLQ46_RS05700 PF01730 UreF CLQ46_RS05705 PF02814 UreE urease accessory protein, N-terminal domain CLQ46_RS05705 PF05194 UreE urease accessory protein, C-terminal domain CLQ46_RS05710 PF02371 Transposase IS116/IS110/IS902 family CLQ46_RS05710 PF01548 Transposase CLQ46_RS05720 PF00699 Urease beta subunit CLQ46_RS05725 PF00547 Urease, gamma subunit CLQ46_RS05730 PF01774 UreD urease accessory protein CLQ46_RS05740 PF02660 Glycerol-3-phosphate acyltransferase CLQ46_RS05745 PF02152 Dihydroneopterin aldolase CLQ46_RS05750 PF02673 Bacitracin resistance protein BacA CLQ46_RS05755 PF01966 HD domain CLQ46_RS05755 PF12627 Probable RNA and SrmB- binding site of polymerase A CLQ46_RS05755 PF01743 Poly A polymerase head domain CLQ46_RS05760 PF08239 Bacterial SH3 domain CLQ46_RS05765 PF01928 CYTH domain CLQ46_RS05770 PF08335 GlnD PII-uridylyltransferase CLQ46_RS05770 PF03710 Glutamate-ammonia ligase adenylyltransferase CLQ46_RS05775 PF00294 pfkB family carbohydrate kinase CLQ46_RS05775 PF01467 Cytidylyltransferase-like CLQ46_RS05780 PF08971 Glycogen synthesis protein CLQ46_RS05785 PF04380 Membrane fusogenic activity CLQ46_RS05790 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CLQ46_RS05795 PF02535 ZIP Zinc transporter CLQ46_RS05800 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CLQ46_RS05805 PF03738 Glutathionylspermidine synthase preATP-grasp CLQ46_RS05810 PF06693 Protein of unknown function (DUF1190) CLQ46_RS05815 PF02321 Outer membrane efflux protein CLQ46_RS05820 PF00293 NUDIX domain CLQ46_RS05825 PF06853 Protein of unknown function (DUF1249) CLQ46_RS05830 PF00149 Calcineurin-like phosphoesterase CLQ46_RS05835 PF05728 Uncharacterised protein family (UPF0227) CLQ46_RS05840 PF00986 DNA gyrase B subunit, carboxyl terminus CLQ46_RS05840 PF01751 Toprim domain CLQ46_RS05840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS05840 PF00204 DNA gyrase B CLQ46_RS05845 PF03992 Antibiotic biosynthesis monooxygenase CLQ46_RS05850 PF02525 Flavodoxin-like fold CLQ46_RS05855 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS05855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS05855 PF08521 Two-component sensor kinase N-terminal CLQ46_RS05860 PF00072 Response regulator receiver domain CLQ46_RS05860 PF00486 Transcriptional regulatory protein, C terminal CLQ46_RS05865 PF04076 Bacterial OB fold (BOF) protein CLQ46_RS05870 PF06445 GyrI-like small molecule binding domain CLQ46_RS05875 PF03989 DNA gyrase C-terminal domain, beta-propeller CLQ46_RS05875 PF00521 DNA gyrase/topoisomerase IV, subunit A CLQ46_RS05880 PF01553 Acyltransferase CLQ46_RS05885 PF00394 Multicopper oxidase CLQ46_RS05885 PF07732 Multicopper oxidase CLQ46_RS05885 PF07731 Multicopper oxidase CLQ46_RS05890 PF04055 Radical SAM superfamily CLQ46_RS05890 PF08497 Radical SAM N-terminal CLQ46_RS05890 PF11842 Domain of unknown function (DUF3362) CLQ46_RS05900 PF00248 Aldo/keto reductase family CLQ46_RS05905 PF00465 Iron-containing alcohol dehydrogenase CLQ46_RS05910 PF06719 AraC-type transcriptional regulator N-terminus CLQ46_RS05910 PF12833 Helix-turn-helix domain CLQ46_RS05915 PF09335 SNARE associated Golgi protein CLQ46_RS05920 PF01053 Cys/Met metabolism PLP-dependent enzyme CLQ46_RS05930 PF01618 MotA/TolQ/ExbB proton channel family CLQ46_RS05935 PF02472 Biopolymer transport protein ExbD/TolR CLQ46_RS05945 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CLQ46_RS05945 PF04616 Glycosyl hydrolases family 43 CLQ46_RS05950 PF03350 Uncharacterized protein family, UPF0114 CLQ46_RS05955 PF01738 Dienelactone hydrolase family CLQ46_RS05960 PF11115 Protein of unknown function (DUF2623) CLQ46_RS05965 PF02798 Glutathione S-transferase, N-terminal domain CLQ46_RS05975 PF05257 CHAP domain CLQ46_RS05975 PF03738 Glutathionylspermidine synthase preATP-grasp CLQ46_RS05980 PF00155 Aminotransferase class I and II CLQ46_RS06000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS06000 PF03466 LysR substrate binding domain CLQ46_RS06005 PF01053 Cys/Met metabolism PLP-dependent enzyme CLQ46_RS06010 PF00571 CBS domain CLQ46_RS06010 PF00291 Pyridoxal-phosphate dependent enzyme CLQ46_RS06045 PF13614 AAA domain CLQ46_RS06055 PF03796 DnaB-like helicase C terminal domain CLQ46_RS06055 PF00772 DnaB-like helicase N terminal domain CLQ46_RS06270 PF13693 Winged helix-turn-helix DNA-binding CLQ46_RS06280 PF00313 'Cold-shock' DNA-binding domain CLQ46_RS06285 PF13693 Winged helix-turn-helix DNA-binding CLQ46_RS06295 PF01609 Transposase DDE domain CLQ46_RS06295 PF05598 Transposase domain (DUF772) CLQ46_RS06335 PF03230 Antirestriction protein CLQ46_RS06350 PF13362 Toprim domain CLQ46_RS06350 PF18818 Metallopeptidase superfamily domain CLQ46_RS06350 PF08401 Domain of unknown function (DUF1738) CLQ46_RS06360 PF00589 Phage integrase family CLQ46_RS06370 PF04474 Protein of unknown function (DUF554) CLQ46_RS06380 PF01276 Orn/Lys/Arg decarboxylase, major domain CLQ46_RS06380 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CLQ46_RS06380 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CLQ46_RS06385 PF03825 Nucleoside H+ symporter CLQ46_RS06390 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CLQ46_RS06390 PF01464 Transglycosylase SLT domain CLQ46_RS06395 PF04362 Bacterial Fe(2+) trafficking CLQ46_RS06400 PF00730 HhH-GPD superfamily base excision DNA repair protein CLQ46_RS06400 PF10576 Iron-sulfur binding domain of endonuclease III CLQ46_RS06400 PF00633 Helix-hairpin-helix motif CLQ46_RS06400 PF14815 NUDIX domain CLQ46_RS06405 PF02390 Putative methyltransferase CLQ46_RS06410 PF04320 Protein with unknown function (DUF469) CLQ46_RS06415 PF11101 Protein of unknown function (DUF2884) CLQ46_RS06420 PF06969 HemN C-terminal domain CLQ46_RS06420 PF04055 Radical SAM superfamily CLQ46_RS06425 PF01725 Ham1 family CLQ46_RS06430 PF02594 Uncharacterised ACR, YggU family COG1872 CLQ46_RS06435 PF02325 YGGT family CLQ46_RS06440 PF01168 Alanine racemase, N-terminal domain CLQ46_RS06445 PF00437 Type II/IV secretion system protein CLQ46_RS06450 PF00196 Bacterial regulatory proteins, luxR family CLQ46_RS06455 PF03652 Holliday junction resolvase CLQ46_RS06460 PF02622 Uncharacterized ACR, COG1678 CLQ46_RS06465 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CLQ46_RS06465 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CLQ46_RS06470 PF04452 RNA methyltransferase CLQ46_RS06475 PF04231 Endonuclease I CLQ46_RS06480 PF17283 SprT-like zinc ribbon domain CLQ46_RS06480 PF10263 SprT-like family CLQ46_RS06485 PF00083 Sugar (and other) transporter CLQ46_RS06490 PF02773 S-adenosylmethionine synthetase, C-terminal domain CLQ46_RS06490 PF02772 S-adenosylmethionine synthetase, central domain CLQ46_RS06490 PF00438 S-adenosylmethionine synthetase, N-terminal domain CLQ46_RS06505 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CLQ46_RS06505 PF17944 Arginine decarboxylase C-terminal helical extension CLQ46_RS06505 PF17810 Arginine decarboxylase helical bundle domain CLQ46_RS06510 PF00491 Arginase family CLQ46_RS06525 PF00355 Rieske [2Fe-2S] domain CLQ46_RS06535 PF00355 Rieske [2Fe-2S] domain CLQ46_RS06545 PF01614 Bacterial transcriptional regulator CLQ46_RS06545 PF09339 IclR helix-turn-helix domain CLQ46_RS06555 PF14759 Reductase C-terminal CLQ46_RS06555 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ46_RS06570 PF12697 Alpha/beta hydrolase family CLQ46_RS06580 PF03447 Homoserine dehydrogenase, NAD binding domain CLQ46_RS06580 PF01958 Domain of unknown function DUF108 CLQ46_RS06585 PF00171 Aldehyde dehydrogenase family CLQ46_RS06590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLQ46_RS06590 PF00205 Thiamine pyrophosphate enzyme, central domain CLQ46_RS06590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ46_RS06595 PF03573 outer membrane porin, OprD family CLQ46_RS06605 PF05598 Transposase domain (DUF772) CLQ46_RS06605 PF01609 Transposase DDE domain CLQ46_RS06610 PF01435 Peptidase family M48 CLQ46_RS06615 PF02779 Transketolase, pyrimidine binding domain CLQ46_RS06615 PF00456 Transketolase, thiamine diphosphate binding domain CLQ46_RS06615 PF02780 Transketolase, C-terminal domain CLQ46_RS06620 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLQ46_RS06620 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CLQ46_RS06625 PF00162 Phosphoglycerate kinase CLQ46_RS06630 PF01116 Fructose-bisphosphate aldolase class-II CLQ46_RS06635 PF05552 Conserved TM helix CLQ46_RS06635 PF00924 Mechanosensitive ion channel CLQ46_RS06640 PF01810 LysE type translocator CLQ46_RS06645 PF04402 Protein of unknown function (DUF541) CLQ46_RS06650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS06650 PF03466 LysR substrate binding domain CLQ46_RS06655 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CLQ46_RS06660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLQ46_RS06660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLQ46_RS06660 PF01842 ACT domain CLQ46_RS06665 PF01812 5-formyltetrahydrofolate cyclo-ligase family CLQ46_RS06675 PF05164 Cell division protein ZapA CLQ46_RS06680 PF03695 Uncharacterised protein family (UPF0149) CLQ46_RS06685 PF05195 Aminopeptidase P, N-terminal domain CLQ46_RS06685 PF00557 Metallopeptidase family M24 CLQ46_RS06690 PF01494 FAD binding domain CLQ46_RS06695 PF01494 FAD binding domain CLQ46_RS06700 PF08669 Glycine cleavage T-protein C-terminal barrel domain CLQ46_RS06700 PF01571 Aminomethyltransferase folate-binding domain CLQ46_RS06705 PF01597 Glycine cleavage H-protein CLQ46_RS06710 PF02347 Glycine cleavage system P-protein CLQ46_RS06720 PF00578 AhpC/TSA family CLQ46_RS06740 PF00232 Glycosyl hydrolase family 1 CLQ46_RS06745 PF01418 Helix-turn-helix domain, rpiR family CLQ46_RS06745 PF01380 SIS domain CLQ46_RS06750 PF04266 ASCH domain CLQ46_RS06755 PF03006 Haemolysin-III related CLQ46_RS06760 PF01571 Aminomethyltransferase folate-binding domain CLQ46_RS06765 PF03937 Flavinator of succinate dehydrogenase CLQ46_RS06770 PF07254 Membrane-bound toxin component of toxin-antitoxin system CLQ46_RS06775 PF00258 Flavodoxin CLQ46_RS06780 PF00589 Phage integrase family CLQ46_RS06780 PF02899 Phage integrase, N-terminal SAM-like domain CLQ46_RS06785 PF10411 Disulfide bond isomerase protein N-terminus CLQ46_RS06785 PF13098 Thioredoxin-like domain CLQ46_RS06790 PF02272 DHHA1 domain CLQ46_RS06790 PF01368 DHH family CLQ46_RS06790 PF17768 RecJ OB domain CLQ46_RS06800 PF01336 OB-fold nucleic acid binding domain CLQ46_RS06800 PF00152 tRNA synthetases class II (D, K and N) CLQ46_RS06805 PF00293 NUDIX domain CLQ46_RS06815 PF01476 LysM domain CLQ46_RS06815 PF01551 Peptidase family M23 CLQ46_RS06825 PF07690 Major Facilitator Superfamily CLQ46_RS06830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS06830 PF03466 LysR substrate binding domain CLQ46_RS06840 PF00248 Aldo/keto reductase family CLQ46_RS06845 PF02525 Flavodoxin-like fold CLQ46_RS06855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS06855 PF03466 LysR substrate binding domain CLQ46_RS06870 PF01022 Bacterial regulatory protein, arsR family CLQ46_RS06875 PF02040 Arsenical pump membrane protein CLQ46_RS06880 PF03960 ArsC family CLQ46_RS06885 PF00854 POT family CLQ46_RS06890 PF08986 Domain of unknown function (DUF1889) CLQ46_RS06895 PF02321 Outer membrane efflux protein CLQ46_RS06900 PF04632 Fusaric acid resistance protein family CLQ46_RS06905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ46_RS06905 PF00529 HlyD membrane-fusion protein of T1SS CLQ46_RS06910 PF17090 Uncharacterised protein family CLQ46_RS06915 PF06902 Divergent 4Fe-4S mono-cluster CLQ46_RS06920 PF14542 GCN5-related N-acetyl-transferase CLQ46_RS06930 PF09160 FimH, mannose binding CLQ46_RS06930 PF00419 Fimbrial protein CLQ46_RS06940 PF00419 Fimbrial protein CLQ46_RS06945 PF00577 Outer membrane usher protein CLQ46_RS06945 PF13954 PapC N-terminal domain CLQ46_RS06945 PF13953 PapC C-terminal domain CLQ46_RS06950 PF02753 Pili assembly chaperone PapD, C-terminal domain CLQ46_RS06950 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CLQ46_RS06955 PF00419 Fimbrial protein CLQ46_RS06960 PF00419 Fimbrial protein CLQ46_RS06965 PF00589 Phage integrase family CLQ46_RS06970 PF00589 Phage integrase family CLQ46_RS06980 PF03824 High-affinity nickel-transport protein CLQ46_RS06985 PF01047 MarR family CLQ46_RS06990 PF00892 EamA-like transporter family CLQ46_RS07000 PF00419 Fimbrial protein CLQ46_RS07005 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CLQ46_RS07005 PF02753 Pili assembly chaperone PapD, C-terminal domain CLQ46_RS07010 PF00577 Outer membrane usher protein CLQ46_RS07010 PF13954 PapC N-terminal domain CLQ46_RS07010 PF13953 PapC C-terminal domain CLQ46_RS07015 PF00419 Fimbrial protein CLQ46_RS07030 PF00072 Response regulator receiver domain CLQ46_RS07030 PF00196 Bacterial regulatory proteins, luxR family CLQ46_RS07040 PF00248 Aldo/keto reductase family CLQ46_RS07045 PF03222 Tryptophan/tyrosine permease family CLQ46_RS07055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS07055 PF03466 LysR substrate binding domain CLQ46_RS07060 PF02803 Thiolase, C-terminal domain CLQ46_RS07060 PF00108 Thiolase, N-terminal domain CLQ46_RS07065 PF06178 Oligogalacturonate-specific porin protein (KdgM) CLQ46_RS07070 PF14583 Oligogalacturonate lyase CLQ46_RS07080 PF00083 Sugar (and other) transporter CLQ46_RS07085 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CLQ46_RS07085 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS07090 PF01306 LacY proton/sugar symporter CLQ46_RS07095 PF08244 Glycosyl hydrolases family 32 C terminal CLQ46_RS07095 PF00251 Glycosyl hydrolases family 32 N-terminal domain CLQ46_RS07110 PF00005 ABC transporter CLQ46_RS07110 PF17912 MalK OB fold domain CLQ46_RS07115 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS07120 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS07125 PF16867 Dimethlysulfonioproprionate lyase CLQ46_RS07130 PF01177 Asp/Glu/Hydantoin racemase CLQ46_RS07135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS07135 PF03466 LysR substrate binding domain CLQ46_RS07140 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CLQ46_RS07140 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CLQ46_RS07145 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS07150 PF02378 Phosphotransferase system, EIIC CLQ46_RS07155 PF00232 Glycosyl hydrolase family 1 CLQ46_RS07160 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS07160 PF07729 FCD domain CLQ46_RS07170 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS07185 PF01553 Acyltransferase CLQ46_RS07185 PF00501 AMP-binding enzyme CLQ46_RS07190 PF07690 Major Facilitator Superfamily CLQ46_RS07195 PF00248 Aldo/keto reductase family CLQ46_RS07200 PF06004 Bacterial protein of unknown function (DUF903) CLQ46_RS07205 PF03741 Integral membrane protein TerC family CLQ46_RS07210 PF02976 DNA mismatch repair enzyme MutH CLQ46_RS07215 PF00293 NUDIX domain CLQ46_RS07220 PF05524 PEP-utilising enzyme, N-terminal CLQ46_RS07220 PF00391 PEP-utilising enzyme, mobile domain CLQ46_RS07220 PF02896 PEP-utilising enzyme, TIM barrel domain CLQ46_RS07220 PF01590 GAF domain CLQ46_RS07225 PF01790 Prolipoprotein diacylglyceryl transferase CLQ46_RS07230 PF00303 Thymidylate synthase CLQ46_RS07235 PF07963 Prokaryotic N-terminal methylation motif CLQ46_RS07240 PF07963 Prokaryotic N-terminal methylation motif CLQ46_RS07245 PF10713 Protein of unknown function (DUF2509) CLQ46_RS07250 PF07963 Prokaryotic N-terminal methylation motif CLQ46_RS07250 PF12528 Type II secretion prepilin peptidase dependent protein C CLQ46_RS07255 PF17946 RecC C-terminal domain CLQ46_RS07260 PF16187 Middle or third domain of peptidase_M16 CLQ46_RS07260 PF00675 Insulinase (Peptidase family M16) CLQ46_RS07260 PF05193 Peptidase M16 inactive domain CLQ46_RS07265 PF13361 UvrD-like helicase C-terminal domain CLQ46_RS07265 PF00580 UvrD/REP helicase N-terminal domain CLQ46_RS07265 PF12705 PD-(D/E)XK nuclease superfamily CLQ46_RS07270 PF13538 UvrD-like helicase C-terminal domain CLQ46_RS07280 PF00583 Acetyltransferase (GNAT) family CLQ46_RS07280 PF00696 Amino acid kinase family CLQ46_RS07285 PF01520 N-acetylmuramoyl-L-alanine amidase CLQ46_RS07285 PF11741 AMIN domain CLQ46_RS07290 PF00155 Aminotransferase class I and II CLQ46_RS07295 PF00288 GHMP kinases N terminal domain CLQ46_RS07300 PF00871 Acetokinase family CLQ46_RS07305 PF10662 Ethanolamine utilisation - propanediol utilisation CLQ46_RS07310 PF00936 BMC domain CLQ46_RS07320 PF13237 4Fe-4S dicluster domain CLQ46_RS07320 PF10531 SLBB domain CLQ46_RS07320 PF13375 RnfC Barrel sandwich hybrid domain CLQ46_RS07320 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLQ46_RS07325 PF00465 Iron-containing alcohol dehydrogenase CLQ46_RS07325 PF00171 Aldehyde dehydrogenase family CLQ46_RS07330 PF00171 Aldehyde dehydrogenase family CLQ46_RS07335 PF01923 Cobalamin adenosyltransferase CLQ46_RS07340 PF03319 Ethanolamine utilisation protein EutN/carboxysome CLQ46_RS07350 PF06130 Phosphate propanoyltransferase CLQ46_RS07355 PF00936 BMC domain CLQ46_RS07360 PF00936 BMC domain CLQ46_RS07370 PF18427 DD-reactivating factor swiveling domain CLQ46_RS07370 PF08841 Diol dehydratase reactivase ATPase-like domain CLQ46_RS07375 PF02287 Dehydratase small subunit CLQ46_RS07380 PF02288 Dehydratase medium subunit CLQ46_RS07385 PF02286 Dehydratase large subunit CLQ46_RS07390 PF00936 BMC domain CLQ46_RS07395 PF00936 BMC domain CLQ46_RS07400 PF00230 Major intrinsic protein CLQ46_RS07405 PF12833 Helix-turn-helix domain CLQ46_RS07405 PF10114 Sensory domain found in PocR CLQ46_RS07410 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CLQ46_RS07410 PF07685 CobB/CobQ-like glutamine amidotransferase domain CLQ46_RS07415 PF03186 CobD/Cbib protein CLQ46_RS07420 PF02570 Precorrin-8X methylmutase CLQ46_RS07425 PF01888 CbiD CLQ46_RS07430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLQ46_RS07435 PF05175 Methyltransferase small domain CLQ46_RS07440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLQ46_RS07445 PF11760 Cobalamin synthesis G N-terminal CLQ46_RS07445 PF11761 Cobalamin biosynthesis central region CLQ46_RS07445 PF01890 Cobalamin synthesis G C-terminus CLQ46_RS07450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLQ46_RS07455 PF02571 Precorrin-6x reductase CbiJ/CobK CLQ46_RS07460 PF06180 Cobalt chelatase (CbiK) CLQ46_RS07465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLQ46_RS07470 PF01891 Cobalt uptake substrate-specific transmembrane region CLQ46_RS07475 PF02553 Cobalt transport protein component CbiN CLQ46_RS07480 PF02361 Cobalt transport protein CLQ46_RS07485 PF00005 ABC transporter CLQ46_RS07490 PF07685 CobB/CobQ-like glutamine amidotransferase domain CLQ46_RS07495 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CLQ46_RS07500 PF02277 Phosphoribosyltransferase CLQ46_RS07520 PF06725 3D domain CLQ46_RS07520 PF03562 MltA specific insert domain CLQ46_RS07525 PF00899 ThiF family CLQ46_RS07530 PF02657 Fe-S metabolism associated domain CLQ46_RS07535 PF00266 Aminotransferase class-V CLQ46_RS07540 PF06004 Bacterial protein of unknown function (DUF903) CLQ46_RS07545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS07545 PF03466 LysR substrate binding domain CLQ46_RS07550 PF04241 Protein of unknown function (DUF423) CLQ46_RS07555 PF18125 RlmM ferredoxin-like domain CLQ46_RS07555 PF01728 FtsJ-like methyltransferase CLQ46_RS07560 PF08220 DeoR-like helix-turn-helix domain CLQ46_RS07560 PF00455 DeoR C terminal sensor domain CLQ46_RS07565 PF05025 RbsD / FucU transport protein family CLQ46_RS07570 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ46_RS07570 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ46_RS07575 PF07881 L-fucose isomerase, first N-terminal domain CLQ46_RS07575 PF02952 L-fucose isomerase, C-terminal domain CLQ46_RS07575 PF07882 L-fucose isomerase, second N-terminal domain CLQ46_RS07580 PF07690 Major Facilitator Superfamily CLQ46_RS07585 PF00596 Class II Aldolase and Adducin N-terminal domain CLQ46_RS07590 PF00465 Iron-containing alcohol dehydrogenase CLQ46_RS07595 PF01367 5'-3' exonuclease, C-terminal SAM fold CLQ46_RS07595 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CLQ46_RS07600 PF00158 Sigma-54 interaction domain CLQ46_RS07605 PF00296 Luciferase-like monooxygenase CLQ46_RS07615 PF00296 Luciferase-like monooxygenase CLQ46_RS07620 PF00005 ABC transporter CLQ46_RS07625 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS07630 PF03180 NLPA lipoprotein CLQ46_RS07640 PF07690 Major Facilitator Superfamily CLQ46_RS07650 PF09084 NMT1/THI5 like CLQ46_RS07655 PF03313 Serine dehydratase alpha chain CLQ46_RS07655 PF03315 Serine dehydratase beta chain CLQ46_RS07665 PF11892 Domain of unknown function (DUF3412) CLQ46_RS07665 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CLQ46_RS07665 PF03641 Possible lysine decarboxylase CLQ46_RS07670 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CLQ46_RS07670 PF14489 QueF-like protein CLQ46_RS07675 PF07348 Syd protein (SUKH-2) CLQ46_RS07680 PF04287 tRNA pseudouridine synthase C CLQ46_RS07685 PF00849 RNA pseudouridylate synthase CLQ46_RS07690 PF00258 Flavodoxin CLQ46_RS07695 PF07690 Major Facilitator Superfamily CLQ46_RS07700 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CLQ46_RS07700 PF13378 Enolase C-terminal domain-like CLQ46_RS07705 PF13378 Enolase C-terminal domain-like CLQ46_RS07710 PF02595 Glycerate kinase family CLQ46_RS07715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS07715 PF00672 HAMP domain CLQ46_RS07715 PF00072 Response regulator receiver domain CLQ46_RS07715 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS07715 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CLQ46_RS07715 PF01627 Hpt domain CLQ46_RS07720 PF01938 TRAM domain CLQ46_RS07720 PF05958 tRNA (Uracil-5-)-methyltransferase CLQ46_RS07725 PF02824 TGS domain CLQ46_RS07725 PF13291 ACT domain CLQ46_RS07725 PF04607 Region found in RelA / SpoT proteins CLQ46_RS07730 PF03819 MazG nucleotide pyrophosphohydrolase domain CLQ46_RS07735 PF00117 Glutamine amidotransferase class-I CLQ46_RS07735 PF06418 CTP synthase N-terminus CLQ46_RS07740 PF03952 Enolase, N-terminal domain CLQ46_RS07740 PF00113 Enolase, C-terminal TIM barrel domain CLQ46_RS07750 PF04055 Radical SAM superfamily CLQ46_RS07755 PF01242 6-pyruvoyl tetrahydropterin synthase CLQ46_RS07760 PF00667 FAD binding domain CLQ46_RS07760 PF00258 Flavodoxin CLQ46_RS07760 PF00175 Oxidoreductase NAD-binding domain CLQ46_RS07765 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CLQ46_RS07765 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CLQ46_RS07770 PF01507 Phosphoadenosine phosphosulfate reductase family CLQ46_RS07775 PF04389 Peptidase family M28 CLQ46_RS07780 PF10414 Sirohaem synthase dimerisation region CLQ46_RS07780 PF14824 Sirohaem biosynthesis protein central CLQ46_RS07780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLQ46_RS07785 PF01507 Phosphoadenosine phosphosulfate reductase family CLQ46_RS07790 PF00009 Elongation factor Tu GTP binding domain CLQ46_RS07800 PF12084 Protein of unknown function (DUF3561) CLQ46_RS07805 PF04977 Septum formation initiator CLQ46_RS07810 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CLQ46_RS07815 PF02542 YgbB family CLQ46_RS07820 PF01142 tRNA pseudouridine synthase D (TruD) CLQ46_RS07825 PF01975 Survival protein SurE CLQ46_RS07835 PF01551 Peptidase family M23 CLQ46_RS07835 PF01476 LysM domain CLQ46_RS07840 PF00140 Sigma-70 factor, region 1.2 CLQ46_RS07840 PF04542 Sigma-70 region 2 CLQ46_RS07840 PF04539 Sigma-70 region 3 CLQ46_RS07840 PF04545 Sigma-70, region 4 CLQ46_RS07850 PF07690 Major Facilitator Superfamily CLQ46_RS07855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS07855 PF03466 LysR substrate binding domain CLQ46_RS07860 PF01047 MarR family CLQ46_RS07865 PF02441 Flavoprotein CLQ46_RS07870 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CLQ46_RS07885 PF01848 Hok/gef family CLQ46_RS07890 PF05190 MutS family domain IV CLQ46_RS07890 PF01624 MutS domain I CLQ46_RS07890 PF05188 MutS domain II CLQ46_RS07890 PF05192 MutS domain III CLQ46_RS07890 PF00488 MutS domain V CLQ46_RS07910 PF00005 ABC transporter CLQ46_RS07915 PF01032 FecCD transport family CLQ46_RS07920 PF01497 Periplasmic binding protein CLQ46_RS07925 PF05171 Haemin-degrading HemS.ChuX domain CLQ46_RS07930 PF07715 TonB-dependent Receptor Plug Domain CLQ46_RS07930 PF00593 TonB dependent receptor CLQ46_RS07940 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ46_RS07940 PF00205 Thiamine pyrophosphate enzyme, central domain CLQ46_RS07940 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLQ46_RS07945 PF03547 Membrane transport protein CLQ46_RS07955 PF11756 Nitrous oxide-stimulated promoter CLQ46_RS07960 PF00950 ABC 3 transport family CLQ46_RS07965 PF00950 ABC 3 transport family CLQ46_RS07970 PF00005 ABC transporter CLQ46_RS07975 PF01297 Zinc-uptake complex component A periplasmic CLQ46_RS07980 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS07985 PF00480 ROK family CLQ46_RS07990 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CLQ46_RS07995 PF02378 Phosphotransferase system, EIIC CLQ46_RS08000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ46_RS08005 PF02378 Phosphotransferase system, EIIC CLQ46_RS08015 PF02264 LamB porin CLQ46_RS08025 PF00232 Glycosyl hydrolase family 1 CLQ46_RS08030 PF01590 GAF domain CLQ46_RS08030 PF02954 Bacterial regulatory protein, Fis family CLQ46_RS08030 PF00158 Sigma-54 interaction domain CLQ46_RS08035 PF02769 AIR synthase related protein, C-terminal domain CLQ46_RS08035 PF00586 AIR synthase related protein, N-terminal domain CLQ46_RS08040 PF01924 Hydrogenase formation hypA family CLQ46_RS08045 PF01455 HupF/HypC family CLQ46_RS08050 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLQ46_RS08055 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CLQ46_RS08060 PF11046 Transcriptional repressor of hyc and hyp operons CLQ46_RS08070 PF13247 4Fe-4S dicluster domain CLQ46_RS08075 PF00361 Proton-conducting membrane transporter CLQ46_RS08080 PF00146 NADH dehydrogenase CLQ46_RS08085 PF00374 Nickel-dependent hydrogenase CLQ46_RS08085 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CLQ46_RS08085 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CLQ46_RS08090 PF12838 4Fe-4S dicluster domain CLQ46_RS08095 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CLQ46_RS08100 PF07450 Formate hydrogenlyase maturation protein HycH CLQ46_RS08105 PF01750 Hydrogenase maturation protease CLQ46_RS08110 PF08845 Toxin SymE, type I toxin-antitoxin system CLQ46_RS08115 PF00232 Glycosyl hydrolase family 1 CLQ46_RS08120 PF00367 phosphotransferase system, EIIB CLQ46_RS08120 PF02378 Phosphotransferase system, EIIC CLQ46_RS08125 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS08130 PF12800 4Fe-4S binding domain CLQ46_RS08130 PF13247 4Fe-4S dicluster domain CLQ46_RS08135 PF01300 Telomere recombination CLQ46_RS08135 PF07503 HypF finger CLQ46_RS08135 PF17788 HypF Kae1-like domain CLQ46_RS08135 PF00708 Acylphosphatase CLQ46_RS08140 PF03824 High-affinity nickel-transport protein CLQ46_RS08145 PF18113 Rubredoxin binding C-terminal domain CLQ46_RS08145 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ46_RS08150 PF00301 Rubredoxin CLQ46_RS08150 PF00753 Metallo-beta-lactamase superfamily CLQ46_RS08150 PF00258 Flavodoxin CLQ46_RS08160 PF00158 Sigma-54 interaction domain CLQ46_RS08160 PF01590 GAF domain CLQ46_RS08165 PF01380 SIS domain CLQ46_RS08165 PF00571 CBS domain CLQ46_RS08170 PF00455 DeoR C terminal sensor domain CLQ46_RS08170 PF08220 DeoR-like helix-turn-helix domain CLQ46_RS08175 PF06923 Glucitol operon activator protein (GutM) CLQ46_RS08180 PF00106 short chain dehydrogenase CLQ46_RS08185 PF03829 PTS system glucitol/sorbitol-specific IIA component CLQ46_RS08190 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CLQ46_RS08190 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CLQ46_RS08195 PF03608 PTS system enzyme II sorbitol-specific factor CLQ46_RS08200 PF13406 Transglycosylase SLT domain CLQ46_RS08210 PF00005 ABC transporter CLQ46_RS08215 PF00950 ABC 3 transport family CLQ46_RS08220 PF01297 Zinc-uptake complex component A periplasmic CLQ46_RS08225 PF02464 Competence-damaged protein CLQ46_RS08230 PF00154 recA bacterial DNA recombination protein CLQ46_RS08235 PF02631 RecX family CLQ46_RS08240 PF01411 tRNA synthetases class II (A) CLQ46_RS08240 PF02272 DHHA1 domain CLQ46_RS08240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLQ46_RS08250 PF02599 Global regulator protein family CLQ46_RS08280 PF04972 BON domain CLQ46_RS08285 PF13419 Haloacid dehalogenase-like hydrolase CLQ46_RS08290 PF09335 SNARE associated Golgi protein CLQ46_RS08295 PF04262 Glutamate-cysteine ligase CLQ46_RS08300 PF02664 S-Ribosylhomocysteinase (LuxS) CLQ46_RS08305 PF12852 Cupin CLQ46_RS08305 PF12833 Helix-turn-helix domain CLQ46_RS08310 PF08502 LeuA allosteric (dimerisation) domain CLQ46_RS08310 PF00682 HMGL-like CLQ46_RS08315 PF07690 Major Facilitator Superfamily CLQ46_RS08320 PF00529 HlyD membrane-fusion protein of T1SS CLQ46_RS08320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ46_RS08325 PF01047 MarR family CLQ46_RS08330 PF05437 Branched-chain amino acid transport protein (AzlD) CLQ46_RS08335 PF03591 AzlC protein CLQ46_RS08340 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CLQ46_RS08345 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS08350 PF00571 CBS domain CLQ46_RS08350 PF00005 ABC transporter CLQ46_RS08355 PF00268 Ribonucleotide reductase, small chain CLQ46_RS08360 PF02867 Ribonucleotide reductase, barrel domain CLQ46_RS08360 PF00317 Ribonucleotide reductase, all-alpha domain CLQ46_RS08360 PF08343 Ribonucleotide reductase N-terminal CLQ46_RS08365 PF07972 NrdI Flavodoxin like CLQ46_RS08370 PF00462 Glutaredoxin CLQ46_RS08375 PF02627 Carboxymuconolactone decarboxylase family CLQ46_RS08380 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS08380 PF00155 Aminotransferase class I and II CLQ46_RS08385 PF05957 Bacterial protein of unknown function (DUF883) CLQ46_RS08390 PF09400 Protein of unknown function (DUF2002) CLQ46_RS08400 PF05598 Transposase domain (DUF772) CLQ46_RS08400 PF01609 Transposase DDE domain CLQ46_RS08410 PF06610 L-alanine exporter CLQ46_RS08425 PF00816 H-NS histone family CLQ46_RS08440 PF11127 Protein of unknown function (DUF2892) CLQ46_RS08440 PF00581 Rhodanese-like domain CLQ46_RS08445 PF01022 Bacterial regulatory protein, arsR family CLQ46_RS08450 PF02525 Flavodoxin-like fold CLQ46_RS08455 PF03466 LysR substrate binding domain CLQ46_RS08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS08460 PF02954 Bacterial regulatory protein, Fis family CLQ46_RS08460 PF00158 Sigma-54 interaction domain CLQ46_RS08460 PF01590 GAF domain CLQ46_RS08465 PF00171 Aldehyde dehydrogenase family CLQ46_RS08470 PF16970 Type-1 fimbrial protein, A CLQ46_RS08475 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CLQ46_RS08475 PF02753 Pili assembly chaperone PapD, C-terminal domain CLQ46_RS08480 PF13953 PapC C-terminal domain CLQ46_RS08480 PF00577 Outer membrane usher protein CLQ46_RS08480 PF13954 PapC N-terminal domain CLQ46_RS08495 PF13954 PapC N-terminal domain CLQ46_RS08495 PF13953 PapC C-terminal domain CLQ46_RS08495 PF00577 Outer membrane usher protein CLQ46_RS08500 PF02753 Pili assembly chaperone PapD, C-terminal domain CLQ46_RS08500 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CLQ46_RS08505 PF00419 Fimbrial protein CLQ46_RS08510 PF00196 Bacterial regulatory proteins, luxR family CLQ46_RS08510 PF00072 Response regulator receiver domain CLQ46_RS08525 PF00106 short chain dehydrogenase CLQ46_RS08530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLQ46_RS08535 PF00596 Class II Aldolase and Adducin N-terminal domain CLQ46_RS08540 PF00005 ABC transporter CLQ46_RS08540 PF03459 TOBE domain CLQ46_RS08545 PF01609 Transposase DDE domain CLQ46_RS08545 PF05598 Transposase domain (DUF772) CLQ46_RS08550 PF00589 Phage integrase family CLQ46_RS08550 PF02899 Phage integrase, N-terminal SAM-like domain CLQ46_RS08555 PF07022 Bacteriophage CI repressor helix-turn-helix domain CLQ46_RS08555 PF16452 Bacteriophage CI repressor C-terminal domain CLQ46_RS08565 PF06892 Phage regulatory protein CII (CP76) CLQ46_RS08575 PF17282 Family of unknown function (DUF5347) CLQ46_RS08585 PF01258 Prokaryotic dksA/traR C4-type zinc finger CLQ46_RS08590 PF02086 D12 class N6 adenine-specific DNA methyltransferase CLQ46_RS08595 PF05840 Bacteriophage replication gene A protein (GPA) CLQ46_RS08605 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLQ46_RS08615 PF06183 DinI-like family CLQ46_RS08750 PF04984 Phage tail sheath protein subtilisin-like domain CLQ46_RS08750 PF17482 Phage tail sheath C-terminal domain CLQ46_RS08775 PF01609 Transposase DDE domain CLQ46_RS08775 PF05598 Transposase domain (DUF772) CLQ46_RS08800 PF04606 Ogr/Delta-like zinc finger CLQ46_RS08815 PF01668 SmpB protein CLQ46_RS08820 PF03364 Polyketide cyclase / dehydrase and lipid transport CLQ46_RS08825 PF03658 RnfH family Ubiquitin CLQ46_RS08830 PF04355 SmpA / OmlA family CLQ46_RS08835 PF02463 RecF/RecN/SMC N terminal domain CLQ46_RS08840 PF01513 ATP-NAD kinase CLQ46_RS08850 PF01025 GrpE CLQ46_RS08855 PF01595 Cyclin M transmembrane N-terminal domain CLQ46_RS08855 PF00571 CBS domain CLQ46_RS08855 PF03471 Transporter associated domain CLQ46_RS08860 PF01578 Cytochrome C assembly protein CLQ46_RS08865 PF02978 Signal peptide binding domain CLQ46_RS08865 PF02881 SRP54-type protein, helical bundle domain CLQ46_RS08865 PF00448 SRP54-type protein, GTPase domain CLQ46_RS08870 PF00886 Ribosomal protein S16 CLQ46_RS08875 PF01782 RimM N-terminal domain CLQ46_RS08875 PF05239 PRC-barrel domain CLQ46_RS08880 PF01746 tRNA (Guanine-1)-methyltransferase CLQ46_RS08885 PF01245 Ribosomal protein L19 CLQ46_RS08900 PF00691 OmpA family CLQ46_RS08905 PF17152 Periplasmic sensor domain CLQ46_RS08905 PF00990 Diguanylate cyclase, GGDEF domain CLQ46_RS08910 PF13689 YfiR/HmsC-like CLQ46_RS08915 PF00793 DAHP synthetase I family CLQ46_RS08920 PF01817 Chorismate mutase type II CLQ46_RS08920 PF02153 Prephenate dehydrogenase CLQ46_RS08925 PF08450 SMP-30/Gluconolactonase/LRE-like region CLQ46_RS08930 PF00800 Prephenate dehydratase CLQ46_RS08930 PF01817 Chorismate mutase type II CLQ46_RS08940 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CLQ46_RS08945 PF13525 Outer membrane lipoprotein CLQ46_RS08950 PF01479 S4 domain CLQ46_RS08950 PF00849 RNA pseudouridylate synthase CLQ46_RS08955 PF02578 Multi-copper polyphenol oxidoreductase laccase CLQ46_RS08960 PF17871 AAA lid domain CLQ46_RS08960 PF10431 C-terminal, D2-small domain, of ClpB protein CLQ46_RS08960 PF07724 AAA domain (Cdc48 subfamily) CLQ46_RS08960 PF00004 ATPase family associated with various cellular activities (AAA) CLQ46_RS08960 PF02861 Clp amino terminal domain, pathogenicity island component CLQ46_RS08985 PF00083 Sugar (and other) transporter CLQ46_RS08990 PF10043 Predicted periplasmic lipoprotein (DUF2279) CLQ46_RS08995 PF13091 PLD-like domain CLQ46_RS09000 PF13607 Succinyl-CoA ligase like flavodoxin domain CLQ46_RS09000 PF13380 CoA binding domain CLQ46_RS09000 PF00583 Acetyltransferase (GNAT) family CLQ46_RS09005 PF03942 DTW domain CLQ46_RS09010 PF00085 Thioredoxin CLQ46_RS09015 PF00588 SpoU rRNA Methylase family CLQ46_RS09015 PF08032 RNA 2'-O ribose methyltransferase substrate binding CLQ46_RS09020 PF03167 Uracil DNA glycosylase superfamily CLQ46_RS09025 PF01228 Glycine radical CLQ46_RS09030 PF00271 Helicase conserved C-terminal domain CLQ46_RS09030 PF00270 DEAD/DEAH box helicase CLQ46_RS09035 PF05175 Methyltransferase small domain CLQ46_RS09040 PF00890 FAD binding domain CLQ46_RS09040 PF02910 Fumarate reductase flavoprotein C-term CLQ46_RS09045 PF08281 Sigma-70, region 4 CLQ46_RS09045 PF04542 Sigma-70 region 2 CLQ46_RS09050 PF03873 Anti sigma-E protein RseA, C-terminal domain CLQ46_RS09050 PF03872 Anti sigma-E protein RseA, N-terminal domain CLQ46_RS09055 PF17188 MucB/RseB C-terminal domain CLQ46_RS09055 PF03888 MucB/RseB N-terminal domain CLQ46_RS09065 PF00009 Elongation factor Tu GTP binding domain CLQ46_RS09065 PF03144 Elongation factor Tu domain 2 CLQ46_RS09065 PF00679 Elongation factor G C-terminus CLQ46_RS09065 PF06421 GTP-binding protein LepA C-terminus CLQ46_RS09070 PF10502 Signal peptidase, peptidase S26 CLQ46_RS09075 PF00035 Double-stranded RNA binding motif CLQ46_RS09075 PF14622 Ribonuclease-III-like CLQ46_RS09080 PF07650 KH domain CLQ46_RS09080 PF01926 50S ribosome-binding GTPase CLQ46_RS09085 PF11967 Recombination protein O N terminal CLQ46_RS09085 PF02565 Recombination protein O C terminal CLQ46_RS09090 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CLQ46_RS09095 PF01648 4'-phosphopantetheinyl transferase superfamily CLQ46_RS09100 PF12838 4Fe-4S dicluster domain CLQ46_RS09105 PF01418 Helix-turn-helix domain, rpiR family CLQ46_RS09105 PF01380 SIS domain CLQ46_RS09115 PF14437 MafB19-like deaminase CLQ46_RS09120 PF01464 Transglycosylase SLT domain CLQ46_RS09120 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ46_RS09125 PF02769 AIR synthase related protein, C-terminal domain CLQ46_RS09125 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CLQ46_RS09125 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CLQ46_RS09130 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS09130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS09135 PF13942 YfhG lipoprotein CLQ46_RS09140 PF00158 Sigma-54 interaction domain CLQ46_RS09140 PF00072 Response regulator receiver domain CLQ46_RS09145 PF00543 Nitrogen regulatory protein P-II CLQ46_RS09150 PF00970 Oxidoreductase FAD-binding domain CLQ46_RS09150 PF00175 Oxidoreductase NAD-binding domain CLQ46_RS09150 PF00042 Globin CLQ46_RS09160 PF00464 Serine hydroxymethyltransferase CLQ46_RS09165 PF07681 DoxX CLQ46_RS09170 PF00480 ROK family CLQ46_RS09175 PF13181 Tetratricopeptide repeat CLQ46_RS09175 PF17128 Domain of unknown function (DUF5107) CLQ46_RS09180 PF00083 Sugar (and other) transporter CLQ46_RS09185 PF01263 Aldose 1-epimerase CLQ46_RS09190 PF12832 MFS_1 like family CLQ46_RS09195 PF00874 PRD domain CLQ46_RS09200 PF06226 Protein of unknown function (DUF1007) CLQ46_RS09205 PF03824 High-affinity nickel-transport protein CLQ46_RS09215 PF00459 Inositol monophosphatase family CLQ46_RS09220 PF00588 SpoU rRNA Methylase family CLQ46_RS09225 PF02082 Transcriptional regulator CLQ46_RS09230 PF00266 Aminotransferase class-V CLQ46_RS09235 PF01592 NifU-like N terminal domain CLQ46_RS09240 PF01521 Iron-sulphur cluster biosynthesis CLQ46_RS09245 PF00226 DnaJ domain CLQ46_RS09245 PF07743 HSCB C-terminal oligomerisation domain CLQ46_RS09250 PF00012 Hsp70 protein CLQ46_RS09255 PF00111 2Fe-2S iron-sulfur cluster binding domain CLQ46_RS09260 PF04384 Iron-sulphur cluster assembly CLQ46_RS09265 PF00883 Cytosol aminopeptidase family, catalytic domain CLQ46_RS09265 PF12404 Peptidase CLQ46_RS09270 PF14581 SseB protein C-terminal domain CLQ46_RS09270 PF07179 SseB protein N-terminal domain CLQ46_RS09280 PF00581 Rhodanese-like domain CLQ46_RS09285 PF07678 A-macroglobulin TED domain CLQ46_RS09285 PF00207 Alpha-2-macroglobulin family CLQ46_RS09285 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CLQ46_RS09285 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CLQ46_RS09285 PF01835 MG2 domain CLQ46_RS09285 PF07703 Alpha-2-macroglobulin bait region domain CLQ46_RS09285 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CLQ46_RS09285 PF17962 Bacterial macroglobulin domain 6 CLQ46_RS09285 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CLQ46_RS09290 PF00905 Penicillin binding protein transpeptidase domain CLQ46_RS09290 PF06832 Penicillin-Binding Protein C-terminus Family CLQ46_RS09290 PF00912 Transglycosylase CLQ46_RS09295 PF00334 Nucleoside diphosphate kinase CLQ46_RS09305 PF04055 Radical SAM superfamily CLQ46_RS09310 PF13464 Domain of unknown function (DUF4115) CLQ46_RS09315 PF04551 GcpE protein CLQ46_RS09320 PF03129 Anticodon binding domain CLQ46_RS09320 PF13393 Histidyl-tRNA synthetase CLQ46_RS09325 PF09976 Tetratricopeptide repeat-like domain CLQ46_RS09330 PF13360 PQQ-like domain CLQ46_RS09335 PF01926 50S ribosome-binding GTPase CLQ46_RS09335 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CLQ46_RS09345 PF07191 zinc-ribbons CLQ46_RS09350 PF13742 OB-fold nucleic acid binding domain CLQ46_RS09350 PF02601 Exonuclease VII, large subunit CLQ46_RS09355 PF00478 IMP dehydrogenase / GMP reductase domain CLQ46_RS09355 PF00571 CBS domain CLQ46_RS09360 PF00117 Glutamine amidotransferase class-I CLQ46_RS09360 PF00958 GMP synthase C terminal domain CLQ46_RS09360 PF02540 NAD synthase CLQ46_RS09405 PF12684 PDDEXK-like domain of unknown function (DUF3799) CLQ46_RS09405 PF06630 Enterobacterial exodeoxyribonuclease VIII CLQ46_RS09485 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLQ46_RS09500 PF03592 Terminase small subunit CLQ46_RS09500 PF10668 Phage terminase small subunit CLQ46_RS09630 PF05598 Transposase domain (DUF772) CLQ46_RS09630 PF01609 Transposase DDE domain CLQ46_RS09670 PF00182 Chitinase class I CLQ46_RS09680 PF00884 Sulfatase CLQ46_RS09695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS09695 PF03466 LysR substrate binding domain CLQ46_RS09700 PF11119 Protein of unknown function (DUF2633) CLQ46_RS09705 PF05231 MASE1 CLQ46_RS09705 PF00563 EAL domain CLQ46_RS09710 PF02541 Ppx/GppA phosphatase family CLQ46_RS09715 PF13089 Polyphosphate kinase N-terminal domain CLQ46_RS09715 PF17941 Polyphosphate kinase C-terminal domain 1 CLQ46_RS09715 PF13090 Polyphosphate kinase C-terminal domain 2 CLQ46_RS09715 PF02503 Polyphosphate kinase middle domain CLQ46_RS09720 PF00551 Formyl transferase CLQ46_RS09725 PF00586 AIR synthase related protein, N-terminal domain CLQ46_RS09725 PF02769 AIR synthase related protein, C-terminal domain CLQ46_RS09730 PF00480 ROK family CLQ46_RS09735 PF00232 Glycosyl hydrolase family 1 CLQ46_RS09745 PF00860 Permease family CLQ46_RS09750 PF00308 Bacterial dnaA protein CLQ46_RS09755 PF04754 Putative transposase, YhgA-like CLQ46_RS09760 PF03960 ArsC family CLQ46_RS09765 PF01435 Peptidase family M48 CLQ46_RS09770 PF01594 AI-2E family transporter CLQ46_RS09775 PF00578 AhpC/TSA family CLQ46_RS09780 PF01842 ACT domain CLQ46_RS09785 PF00701 Dihydrodipicolinate synthetase family CLQ46_RS09790 PF06804 NlpB/DapX lipoprotein CLQ46_RS09795 PF01259 SAICAR synthetase CLQ46_RS09800 PF04228 Putative neutral zinc metallopeptidase CLQ46_RS09805 PF05127 Helicase CLQ46_RS09805 PF08351 Domain of unknown function (DUF1726) CLQ46_RS09805 PF13718 GNAT acetyltransferase 2 CLQ46_RS09805 PF17176 tRNA-binding domain CLQ46_RS09810 PF02230 Phospholipase/Carboxylesterase CLQ46_RS09815 PF13980 Uncharacterised protein family (UPF0370) CLQ46_RS09820 PF07687 Peptidase dimerisation domain CLQ46_RS09820 PF01546 Peptidase family M20/M25/M40 CLQ46_RS09825 PF03960 ArsC family CLQ46_RS09835 PF00873 AcrB/AcrD/AcrF family CLQ46_RS09845 PF13247 4Fe-4S dicluster domain CLQ46_RS09845 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLQ46_RS09845 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ46_RS09850 PF00293 NUDIX domain CLQ46_RS09855 PF06674 Protein of unknown function (DUF1176) CLQ46_RS09860 PF02780 Transketolase, C-terminal domain CLQ46_RS09860 PF02779 Transketolase, pyrimidine binding domain CLQ46_RS09860 PF00456 Transketolase, thiamine diphosphate binding domain CLQ46_RS09865 PF00923 Transaldolase/Fructose-6-phosphate aldolase CLQ46_RS09870 PF01515 Phosphate acetyl/butaryl transferase CLQ46_RS09870 PF03949 Malic enzyme, NAD binding domain CLQ46_RS09870 PF00390 Malic enzyme, N-terminal domain CLQ46_RS09875 PF00936 BMC domain CLQ46_RS09880 PF10662 Ethanolamine utilisation - propanediol utilisation CLQ46_RS09885 PF06249 Ethanolamine utilisation protein EutQ CLQ46_RS09890 PF01923 Cobalamin adenosyltransferase CLQ46_RS09895 PF01515 Phosphate acetyl/butaryl transferase CLQ46_RS09900 PF00936 BMC domain CLQ46_RS09905 PF03319 Ethanolamine utilisation protein EutN/carboxysome CLQ46_RS09910 PF00171 Aldehyde dehydrogenase family CLQ46_RS09920 PF00465 Iron-containing alcohol dehydrogenase CLQ46_RS09925 PF04346 Ethanolamine utilisation protein, EutH CLQ46_RS09930 PF06277 Ethanolamine utilisation protein EutA CLQ46_RS09935 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CLQ46_RS09940 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CLQ46_RS09945 PF00936 BMC domain CLQ46_RS09950 PF16365 Ethanolamine utilization protein EutK C-terminus CLQ46_RS09950 PF00936 BMC domain CLQ46_RS09955 PF12833 Helix-turn-helix domain CLQ46_RS09960 PF01218 Coproporphyrinogen III oxidase CLQ46_RS09965 PF01520 N-acetylmuramoyl-L-alanine amidase CLQ46_RS09970 PF00583 Acetyltransferase (GNAT) family CLQ46_RS09975 PF11143 Protein of unknown function (DUF2919) CLQ46_RS09980 PF06572 Protein of unknown function (DUF1131) CLQ46_RS09985 PF04261 Dyp-type peroxidase family CLQ46_RS10000 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS10005 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS10010 PF00005 ABC transporter CLQ46_RS10015 PF00291 Pyridoxal-phosphate dependent enzyme CLQ46_RS10020 PF13474 SnoaL-like domain CLQ46_RS10025 PF00155 Aminotransferase class I and II CLQ46_RS10025 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS10030 PF08543 Phosphomethylpyrimidine kinase CLQ46_RS10040 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CLQ46_RS10045 PF05524 PEP-utilising enzyme, N-terminal CLQ46_RS10045 PF00391 PEP-utilising enzyme, mobile domain CLQ46_RS10045 PF02896 PEP-utilising enzyme, TIM barrel domain CLQ46_RS10050 PF00381 PTS HPr component phosphorylation site CLQ46_RS10055 PF00291 Pyridoxal-phosphate dependent enzyme CLQ46_RS10065 PF04354 ZipA, C-terminal FtsZ-binding domain CLQ46_RS10070 PF12826 Helix-hairpin-helix motif CLQ46_RS10070 PF01653 NAD-dependent DNA ligase adenylation domain CLQ46_RS10070 PF03120 NAD-dependent DNA ligase OB-fold domain CLQ46_RS10070 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CLQ46_RS10070 PF00533 BRCA1 C Terminus (BRCT) domain CLQ46_RS10075 PF12843 Putative quorum-sensing-regulated virulence factor CLQ46_RS10080 PF13593 SBF-like CPA transporter family (DUF4137) CLQ46_RS10085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS10085 PF03466 LysR substrate binding domain CLQ46_RS10115 PF00749 tRNA synthetases class I (E and Q), catalytic domain CLQ46_RS10120 PF07037 Putative transcription regulator (DUF1323) CLQ46_RS10125 PF07037 Putative transcription regulator (DUF1323) CLQ46_RS10140 PF05231 MASE1 CLQ46_RS10140 PF00563 EAL domain CLQ46_RS10145 PF07662 Na+ dependent nucleoside transporter C-terminus CLQ46_RS10145 PF07670 Nucleoside recognition CLQ46_RS10145 PF01773 Na+ dependent nucleoside transporter N-terminus CLQ46_RS10150 PF01566 Natural resistance-associated macrophage protein CLQ46_RS10155 PF10697 Protein of unknown function (DUF2502) CLQ46_RS10160 PF00248 Aldo/keto reductase family CLQ46_RS10165 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ46_RS10165 PF00205 Thiamine pyrophosphate enzyme, central domain CLQ46_RS10165 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLQ46_RS10170 PF00654 Voltage gated chloride channel CLQ46_RS10175 PF02685 Glucokinase CLQ46_RS10180 PF00072 Response regulator receiver domain CLQ46_RS10180 PF04397 LytTr DNA-binding domain CLQ46_RS10185 PF06580 Histidine kinase CLQ46_RS10185 PF07694 5TMR of 5TMR-LYT CLQ46_RS10185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS10195 PF00155 Aminotransferase class I and II CLQ46_RS10205 PF07690 Major Facilitator Superfamily CLQ46_RS10210 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLQ46_RS10215 PF03466 LysR substrate binding domain CLQ46_RS10215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS10235 PF01226 Formate/nitrite transporter CLQ46_RS10240 PF04333 MlaA lipoprotein CLQ46_RS10245 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CLQ46_RS10255 PF04175 Protein of unknown function (DUF406) CLQ46_RS10260 PF00108 Thiolase, N-terminal domain CLQ46_RS10260 PF02803 Thiolase, C-terminal domain CLQ46_RS10265 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CLQ46_RS10265 PF00378 Enoyl-CoA hydratase/isomerase CLQ46_RS10265 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CLQ46_RS10270 PF00300 Histidine phosphatase superfamily (branch 1) CLQ46_RS10275 PF01713 Smr domain CLQ46_RS10280 PF05175 Methyltransferase small domain CLQ46_RS10285 PF01264 Chorismate synthase CLQ46_RS10290 PF03411 Penicillin-insensitive murein endopeptidase CLQ46_RS10295 PF01925 Sulfite exporter TauE/SafE CLQ46_RS10300 PF04315 Elongation factor P hydroxylase CLQ46_RS10305 PF08891 YfcL protein CLQ46_RS10310 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CLQ46_RS10310 PF01266 FAD dependent oxidoreductase CLQ46_RS10315 PF00109 Beta-ketoacyl synthase, N-terminal domain CLQ46_RS10315 PF02801 Beta-ketoacyl synthase, C-terminal domain CLQ46_RS10320 PF07690 Major Facilitator Superfamily CLQ46_RS10330 PF11890 Domain of unknown function (DUF3410) CLQ46_RS10330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLQ46_RS10330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLQ46_RS10335 PF02774 Semialdehyde dehydrogenase, dimerisation domain CLQ46_RS10335 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLQ46_RS10340 PF01416 tRNA pseudouridine synthase CLQ46_RS10345 PF09335 SNARE associated Golgi protein CLQ46_RS10350 PF17848 Acetyl-coA carboxylase zinc finger domain CLQ46_RS10350 PF01039 Carboxyl transferase domain CLQ46_RS10355 PF02875 Mur ligase family, glutamate ligase domain CLQ46_RS10355 PF08245 Mur ligase middle domain CLQ46_RS10360 PF05036 Sporulation related domain CLQ46_RS10365 PF02674 Colicin V production protein CLQ46_RS10370 PF00156 Phosphoribosyl transferase domain CLQ46_RS10375 PF02441 Flavoprotein CLQ46_RS10380 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ46_RS10385 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ46_RS10390 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS10395 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS10400 PF00005 ABC transporter CLQ46_RS10405 PF13302 Acetyltransferase (GNAT) domain CLQ46_RS10410 PF08338 Domain of unknown function (DUF1731) CLQ46_RS10410 PF01370 NAD dependent epimerase/dehydratase family CLQ46_RS10415 PF02152 Dihydroneopterin aldolase CLQ46_RS10420 PF00043 Glutathione S-transferase, C-terminal domain CLQ46_RS10420 PF02798 Glutathione S-transferase, N-terminal domain CLQ46_RS10425 PF02798 Glutathione S-transferase, N-terminal domain CLQ46_RS10425 PF14834 Glutathione S-transferase, C-terminal domain CLQ46_RS10430 PF12850 Calcineurin-like phosphoesterase superfamily domain CLQ46_RS10435 PF00293 NUDIX domain CLQ46_RS10440 PF01515 Phosphate acetyl/butaryl transferase CLQ46_RS10440 PF07085 DRTGG domain CLQ46_RS10445 PF00871 Acetokinase family CLQ46_RS10450 PF04217 Protein of unknown function, DUF412 CLQ46_RS10455 PF03887 YfbU domain CLQ46_RS10460 PF13419 Haloacid dehalogenase-like hydrolase CLQ46_RS10465 PF02080 TrkA-C domain CLQ46_RS10465 PF03600 Citrate transporter CLQ46_RS10475 PF00155 Aminotransferase class I and II CLQ46_RS10480 PF03466 LysR substrate binding domain CLQ46_RS10480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS10495 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CLQ46_RS10500 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CLQ46_RS10505 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CLQ46_RS10505 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CLQ46_RS10515 PF10531 SLBB domain CLQ46_RS10515 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLQ46_RS10515 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLQ46_RS10520 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLQ46_RS10520 PF00384 Molybdopterin oxidoreductase CLQ46_RS10520 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLQ46_RS10520 PF01568 Molydopterin dinucleotide binding domain CLQ46_RS10525 PF00146 NADH dehydrogenase CLQ46_RS10530 PF12838 4Fe-4S dicluster domain CLQ46_RS10535 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CLQ46_RS10540 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CLQ46_RS10545 PF00361 Proton-conducting membrane transporter CLQ46_RS10545 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CLQ46_RS10550 PF00361 Proton-conducting membrane transporter CLQ46_RS10555 PF00361 Proton-conducting membrane transporter CLQ46_RS10560 PF12706 Beta-lactamase superfamily domain CLQ46_RS10565 PF13673 Acetyltransferase (GNAT) domain CLQ46_RS10570 PF00425 chorismate binding enzyme CLQ46_RS10575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ46_RS10575 PF16582 Middle domain of thiamine pyrophosphate CLQ46_RS10575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLQ46_RS10580 PF12697 Alpha/beta hydrolase family CLQ46_RS10585 PF00378 Enoyl-CoA hydratase/isomerase CLQ46_RS10590 PF13378 Enolase C-terminal domain-like CLQ46_RS10595 PF13193 AMP-binding enzyme C-terminal domain CLQ46_RS10595 PF00501 AMP-binding enzyme CLQ46_RS10600 PF00293 NUDIX domain CLQ46_RS10605 PF04754 Putative transposase, YhgA-like CLQ46_RS10610 PF07437 YfaZ precursor CLQ46_RS10615 PF00994 Probable molybdopterin binding domain CLQ46_RS10620 PF01614 Bacterial transcriptional regulator CLQ46_RS10620 PF09339 IclR helix-turn-helix domain CLQ46_RS10625 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CLQ46_RS10625 PF13378 Enolase C-terminal domain-like CLQ46_RS10630 PF07690 Major Facilitator Superfamily CLQ46_RS10635 PF03328 HpcH/HpaI aldolase/citrate lyase family CLQ46_RS10640 PF02754 Cysteine-rich domain CLQ46_RS10640 PF13183 4Fe-4S dicluster domain CLQ46_RS10645 PF00890 FAD binding domain CLQ46_RS10650 PF01266 FAD dependent oxidoreductase CLQ46_RS10650 PF04324 BFD-like [2Fe-2S] binding domain CLQ46_RS10655 PF07690 Major Facilitator Superfamily CLQ46_RS10660 PF03009 Glycerophosphoryl diester phosphodiesterase family CLQ46_RS10670 PF00111 2Fe-2S iron-sulfur cluster binding domain CLQ46_RS10675 PF00268 Ribonucleotide reductase, small chain CLQ46_RS10680 PF02867 Ribonucleotide reductase, barrel domain CLQ46_RS10680 PF00317 Ribonucleotide reductase, all-alpha domain CLQ46_RS10680 PF03477 ATP cone domain CLQ46_RS10695 PF03989 DNA gyrase C-terminal domain, beta-propeller CLQ46_RS10695 PF00521 DNA gyrase/topoisomerase IV, subunit A CLQ46_RS10700 PF09456 RcsC Alpha-Beta-Loop (ABL) CLQ46_RS10700 PF00072 Response regulator receiver domain CLQ46_RS10700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS10700 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS10705 PF00072 Response regulator receiver domain CLQ46_RS10705 PF00196 Bacterial regulatory proteins, luxR family CLQ46_RS10710 PF01627 Hpt domain CLQ46_RS10710 PF16359 RcsD-ABL domain CLQ46_RS10710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS10715 PF00267 Gram-negative porin CLQ46_RS10720 PF02424 ApbE family CLQ46_RS10725 PF02805 Metal binding domain of Ada CLQ46_RS10725 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CLQ46_RS10725 PF12833 Helix-turn-helix domain CLQ46_RS10725 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CLQ46_RS10730 PF13532 2OG-Fe(II) oxygenase superfamily CLQ46_RS10735 PF00005 ABC transporter CLQ46_RS10740 PF00571 CBS domain CLQ46_RS10740 PF01769 Divalent cation transporter CLQ46_RS10740 PF03448 MgtE intracellular N domain CLQ46_RS10745 PF00916 Sulfate permease family CLQ46_RS10745 PF01740 STAS domain CLQ46_RS10750 PF06039 Malate:quinone oxidoreductase (Mqo) CLQ46_RS10755 PF03974 Ecotin CLQ46_RS10760 PF01594 AI-2E family transporter CLQ46_RS10770 PF11893 Domain of unknown function (DUF3413) CLQ46_RS10770 PF00884 Sulfatase CLQ46_RS10775 PF07208 Protein of unknown function (DUF1414) CLQ46_RS10780 PF04245 37-kD nucleoid-associated bacterial protein CLQ46_RS10785 PF00455 DeoR C terminal sensor domain CLQ46_RS10785 PF08220 DeoR-like helix-turn-helix domain CLQ46_RS10790 PF00293 NUDIX domain CLQ46_RS10795 PF00144 Beta-lactamase CLQ46_RS10805 PF01386 Ribosomal L25p family CLQ46_RS10810 PF04851 Type III restriction enzyme, res subunit CLQ46_RS10810 PF00271 Helicase conserved C-terminal domain CLQ46_RS10815 PF00849 RNA pseudouridylate synthase CLQ46_RS10815 PF01479 S4 domain CLQ46_RS10820 PF07690 Major Facilitator Superfamily CLQ46_RS10825 PF13989 YejG-like protein CLQ46_RS10830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ46_RS10830 PF00005 ABC transporter CLQ46_RS10835 PF12911 N-terminal TM domain of oligopeptide transport permease C CLQ46_RS10835 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS10840 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS10845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ46_RS10850 PF12792 CSS motif domain associated with EAL CLQ46_RS10850 PF00563 EAL domain CLQ46_RS10855 PF00877 NlpC/P60 family CLQ46_RS10860 PF01569 PAP2 superfamily CLQ46_RS10865 PF07683 Cobalamin synthesis protein cobW C-terminal domain CLQ46_RS10865 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLQ46_RS10870 PF08125 Mannitol dehydrogenase C-terminal domain CLQ46_RS10870 PF01232 Mannitol dehydrogenase Rossmann domain CLQ46_RS10875 PF03786 D-mannonate dehydratase (UxuA) CLQ46_RS10880 PF09285 Elongation factor P, C-terminal CLQ46_RS10880 PF08207 Elongation factor P (EF-P) KOW-like domain CLQ46_RS10880 PF01132 Elongation factor P (EF-P) OB domain CLQ46_RS10885 PF03692 Putative zinc- or iron-chelating domain CLQ46_RS10895 PF07690 Major Facilitator Superfamily CLQ46_RS10905 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ46_RS10905 PF00381 PTS HPr component phosphorylation site CLQ46_RS10910 PF00294 pfkB family carbohydrate kinase CLQ46_RS10915 PF02378 Phosphotransferase system, EIIC CLQ46_RS10915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ46_RS10920 PF01261 Xylose isomerase-like TIM barrel CLQ46_RS10925 PF03601 Conserved hypothetical protein 698 CLQ46_RS10935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS10935 PF03466 LysR substrate binding domain CLQ46_RS10940 PF00324 Amino acid permease CLQ46_RS10955 PF00593 TonB dependent receptor CLQ46_RS10955 PF07715 TonB-dependent Receptor Plug Domain CLQ46_RS10960 PF00756 Putative esterase CLQ46_RS10965 PF01227 GTP cyclohydrolase I CLQ46_RS10970 PF04235 Protein of unknown function (DUF418) CLQ46_RS10975 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS10980 PF13407 Periplasmic binding protein domain CLQ46_RS10985 PF00005 ABC transporter CLQ46_RS10990 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS10995 PF02698 DUF218 domain CLQ46_RS11005 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLQ46_RS11005 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CLQ46_RS11010 PF04172 LrgB-like family CLQ46_RS11015 PF03788 LrgA family CLQ46_RS11020 PF01207 Dihydrouridine synthase (Dus) CLQ46_RS11025 PF04966 Carbohydrate-selective porin, OprB family CLQ46_RS11030 PF03123 CAT RNA binding domain CLQ46_RS11030 PF00874 PRD domain CLQ46_RS11035 PF00367 phosphotransferase system, EIIB CLQ46_RS11035 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CLQ46_RS11035 PF02378 Phosphotransferase system, EIIC CLQ46_RS11040 PF00232 Glycosyl hydrolase family 1 CLQ46_RS11045 PF02321 Outer membrane efflux protein CLQ46_RS11050 PF09335 SNARE associated Golgi protein CLQ46_RS11055 PF04893 Yip1 domain CLQ46_RS11060 PF00768 D-alanyl-D-alanine carboxypeptidase CLQ46_RS11070 PF09330 D-lactate dehydrogenase, membrane binding CLQ46_RS11070 PF01565 FAD binding domain CLQ46_RS11075 PF01915 Glycosyl hydrolase family 3 C-terminal domain CLQ46_RS11075 PF14310 Fibronectin type III-like domain CLQ46_RS11075 PF00933 Glycosyl hydrolase family 3 N terminal domain CLQ46_RS11080 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CLQ46_RS11085 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS11090 PF00005 ABC transporter CLQ46_RS11095 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS11105 PF07694 5TMR of 5TMR-LYT CLQ46_RS11105 PF06580 Histidine kinase CLQ46_RS11110 PF04397 LytTr DNA-binding domain CLQ46_RS11110 PF00072 Response regulator receiver domain CLQ46_RS11115 PF07308 Protein of unknown function (DUF1456) CLQ46_RS11120 PF01588 Putative tRNA binding domain CLQ46_RS11120 PF09334 tRNA synthetases class I (M) CLQ46_RS11125 PF10609 NUBPL iron-transfer P-loop NTPase CLQ46_RS11135 PF11776 Nickel/cobalt transporter regulator CLQ46_RS11140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS11140 PF03466 LysR substrate binding domain CLQ46_RS11145 PF00860 Permease family CLQ46_RS11150 PF01979 Amidohydrolase family CLQ46_RS11150 PF13382 Adenine deaminase C-terminal domain CLQ46_RS11155 PF03466 LysR substrate binding domain CLQ46_RS11155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS11165 PF02110 Hydroxyethylthiazole kinase family CLQ46_RS11170 PF08543 Phosphomethylpyrimidine kinase CLQ46_RS11175 PF01791 DeoC/LacD family aldolase CLQ46_RS11180 PF07690 Major Facilitator Superfamily CLQ46_RS11190 PF00106 short chain dehydrogenase CLQ46_RS11195 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS11200 PF04198 Putative sugar-binding domain CLQ46_RS11205 PF08125 Mannitol dehydrogenase C-terminal domain CLQ46_RS11205 PF01232 Mannitol dehydrogenase Rossmann domain CLQ46_RS11210 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ46_RS11210 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ46_RS11215 PF07690 Major Facilitator Superfamily CLQ46_RS11220 PF13419 Haloacid dehalogenase-like hydrolase CLQ46_RS11225 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CLQ46_RS11225 PF13378 Enolase C-terminal domain-like CLQ46_RS11230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ46_RS11235 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS11240 PF12911 N-terminal TM domain of oligopeptide transport permease C CLQ46_RS11240 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS11245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ46_RS11245 PF00005 ABC transporter CLQ46_RS11250 PF00005 ABC transporter CLQ46_RS11250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ46_RS11255 PF00781 Diacylglycerol kinase catalytic domain CLQ46_RS11260 PF16325 Peptidase family U32 C-terminal domain CLQ46_RS11260 PF01136 Peptidase family U32 CLQ46_RS11265 PF00072 Response regulator receiver domain CLQ46_RS11265 PF00486 Transcriptional regulatory protein, C terminal CLQ46_RS11270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS11270 PF00672 HAMP domain CLQ46_RS11270 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS11275 PF07690 Major Facilitator Superfamily CLQ46_RS11280 PF00873 AcrB/AcrD/AcrF family CLQ46_RS11285 PF00873 AcrB/AcrD/AcrF family CLQ46_RS11290 PF13533 Biotin-lipoyl like CLQ46_RS11295 PF00375 Sodium:dicarboxylate symporter family CLQ46_RS11305 PF00072 Response regulator receiver domain CLQ46_RS11305 PF00486 Transcriptional regulatory protein, C terminal CLQ46_RS11310 PF13426 PAS domain CLQ46_RS11310 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS11310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS11310 PF00672 HAMP domain CLQ46_RS11315 PF00012 Hsp70 protein CLQ46_RS11325 PF00730 HhH-GPD superfamily base excision DNA repair protein CLQ46_RS11325 PF06029 AlkA N-terminal domain CLQ46_RS11330 PF00485 Phosphoribulokinase / Uridine kinase family CLQ46_RS11335 PF00692 dUTPase CLQ46_RS11340 PF05170 AsmA family CLQ46_RS11345 PF00571 CBS domain CLQ46_RS11345 PF03741 Integral membrane protein TerC family CLQ46_RS11345 PF03471 Transporter associated domain CLQ46_RS11350 PF00483 Nucleotidyl transferase CLQ46_RS11355 PF01569 PAP2 superfamily CLQ46_RS11360 PF14052 Capsule assembly protein Wzi CLQ46_RS11365 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CLQ46_RS11365 PF10531 SLBB domain CLQ46_RS11365 PF02563 Polysaccharide biosynthesis/export protein CLQ46_RS11370 PF01451 Low molecular weight phosphotyrosine protein phosphatase CLQ46_RS11375 PF02706 Chain length determinant protein CLQ46_RS11375 PF13614 AAA domain CLQ46_RS11375 PF13807 G-rich domain on putative tyrosine kinase CLQ46_RS11380 PF02397 Bacterial sugar transferase CLQ46_RS11385 PF00535 Glycosyl transferase family 2 CLQ46_RS11395 PF00535 Glycosyl transferase family 2 CLQ46_RS11410 PF14667 Polysaccharide biosynthesis C-terminal domain CLQ46_RS11410 PF01943 Polysaccharide biosynthesis protein CLQ46_RS11415 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CLQ46_RS11415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CLQ46_RS11420 PF16363 GDP-mannose 4,6 dehydratase CLQ46_RS11425 PF00483 Nucleotidyl transferase CLQ46_RS11430 PF04321 RmlD substrate binding domain CLQ46_RS11435 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CLQ46_RS11440 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CLQ46_RS11440 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CLQ46_RS11440 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CLQ46_RS11445 PF01370 NAD dependent epimerase/dehydratase family CLQ46_RS11455 PF16363 GDP-mannose 4,6 dehydratase CLQ46_RS11460 PF00483 Nucleotidyl transferase CLQ46_RS11465 PF04321 RmlD substrate binding domain CLQ46_RS11470 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CLQ46_RS11485 PF00005 ABC transporter CLQ46_RS11505 PF01502 Phosphoribosyl-AMP cyclohydrolase CLQ46_RS11505 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CLQ46_RS11510 PF00977 Histidine biosynthesis protein CLQ46_RS11515 PF00977 Histidine biosynthesis protein CLQ46_RS11520 PF00117 Glutamine amidotransferase class-I CLQ46_RS11525 PF00475 Imidazoleglycerol-phosphate dehydratase CLQ46_RS11525 PF08645 Polynucleotide kinase 3 phosphatase CLQ46_RS11530 PF00155 Aminotransferase class I and II CLQ46_RS11535 PF00815 Histidinol dehydrogenase CLQ46_RS11540 PF08029 HisG, C-terminal domain CLQ46_RS11540 PF01634 ATP phosphoribosyltransferase CLQ46_RS11550 PF01370 NAD dependent epimerase/dehydratase family CLQ46_RS11555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS11555 PF03466 LysR substrate binding domain CLQ46_RS11565 PF13520 Amino acid permease CLQ46_RS11570 PF01022 Bacterial regulatory protein, arsR family CLQ46_RS11575 PF00009 Elongation factor Tu GTP binding domain CLQ46_RS11575 PF00679 Elongation factor G C-terminus CLQ46_RS11575 PF14492 Elongation Factor G, domain II CLQ46_RS11575 PF03144 Elongation factor Tu domain 2 CLQ46_RS11575 PF03764 Elongation factor G, domain IV CLQ46_RS11580 PF08411 Exonuclease C-terminal CLQ46_RS11580 PF00929 Exonuclease CLQ46_RS11585 PF00768 D-alanyl-D-alanine carboxypeptidase CLQ46_RS11585 PF07943 Penicillin-binding protein 5, C-terminal domain CLQ46_RS11595 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLQ46_RS11600 PF06445 GyrI-like small molecule binding domain CLQ46_RS11605 PF04632 Fusaric acid resistance protein family CLQ46_RS11610 PF04363 Protein of unknown function (DUF496) CLQ46_RS11615 PF02654 Cobalamin-5-phosphate synthase CLQ46_RS11620 PF02277 Phosphoribosyltransferase CLQ46_RS11625 PF05221 S-adenosyl-L-homocysteine hydrolase CLQ46_RS11625 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CLQ46_RS11635 PF14552 Tautomerase enzyme CLQ46_RS11640 PF03466 LysR substrate binding domain CLQ46_RS11640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS11650 PF07690 Major Facilitator Superfamily CLQ46_RS11650 PF00083 Sugar (and other) transporter CLQ46_RS11665 PF00990 Diguanylate cyclase, GGDEF domain CLQ46_RS11665 PF00563 EAL domain CLQ46_RS11665 PF03707 Bacterial signalling protein N terminal repeat CLQ46_RS11665 PF13188 PAS domain CLQ46_RS11675 PF09313 Domain of unknown function (DUF1971) CLQ46_RS11680 PF08956 Domain of unknown function (DUF1869) CLQ46_RS11685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS11685 PF03466 LysR substrate binding domain CLQ46_RS11695 PF00561 alpha/beta hydrolase fold CLQ46_RS11700 PF00990 Diguanylate cyclase, GGDEF domain CLQ46_RS11765 PF04002 RadC-like JAB domain CLQ46_RS11810 PF00437 Type II/IV secretion system protein CLQ46_RS11815 PF03743 Bacterial conjugation TrbI-like protein CLQ46_RS11820 PF03524 Conjugal transfer protein CLQ46_RS11840 PF04956 TrbC/VIRB2 family CLQ46_RS11885 PF00593 TonB dependent receptor CLQ46_RS11885 PF07715 TonB-dependent Receptor Plug Domain CLQ46_RS11890 PF00501 AMP-binding enzyme CLQ46_RS11890 PF13193 AMP-binding enzyme C-terminal domain CLQ46_RS11895 PF00975 Thioesterase domain CLQ46_RS11905 PF00550 Phosphopantetheine attachment site CLQ46_RS11905 PF02801 Beta-ketoacyl synthase, C-terminal domain CLQ46_RS11905 PF00109 Beta-ketoacyl synthase, N-terminal domain CLQ46_RS11905 PF16197 Ketoacyl-synthetase C-terminal extension CLQ46_RS11905 PF00668 Condensation domain CLQ46_RS11905 PF00698 Acyl transferase domain CLQ46_RS11910 PF00550 Phosphopantetheine attachment site CLQ46_RS11910 PF08242 Methyltransferase domain CLQ46_RS11910 PF00501 AMP-binding enzyme CLQ46_RS11910 PF00668 Condensation domain CLQ46_RS11920 PF08021 Siderophore-interacting FAD-binding domain CLQ46_RS11920 PF04954 Siderophore-interacting protein CLQ46_RS11920 PF00005 ABC transporter CLQ46_RS11920 PF00664 ABC transporter transmembrane region CLQ46_RS11925 PF00005 ABC transporter CLQ46_RS11925 PF00664 ABC transporter transmembrane region CLQ46_RS11930 PF07690 Major Facilitator Superfamily CLQ46_RS11935 PF00425 chorismate binding enzyme CLQ46_RS11940 PF13356 Arm DNA-binding domain CLQ46_RS11940 PF00589 Phage integrase family CLQ46_RS11950 PF01554 MatE CLQ46_RS11960 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CLQ46_RS11960 PF01048 Phosphorylase superfamily CLQ46_RS11970 PF12146 Serine aminopeptidase, S33 CLQ46_RS11980 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS11980 PF00107 Zinc-binding dehydrogenase CLQ46_RS11985 PF00440 Bacterial regulatory proteins, tetR family CLQ46_RS11985 PF16925 Tetracyclin repressor-like, C-terminal domain CLQ46_RS11990 PF00999 Sodium/hydrogen exchanger family CLQ46_RS12000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS12000 PF03466 LysR substrate binding domain CLQ46_RS12005 PF03466 LysR substrate binding domain CLQ46_RS12005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS12010 PF17969 L,D-transpeptidase C-terminal domain CLQ46_RS12010 PF03734 L,D-transpeptidase catalytic domain CLQ46_RS12015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS12015 PF03466 LysR substrate binding domain CLQ46_RS12025 PF06167 Glucose-regulated metallo-peptidase M90 CLQ46_RS12035 PF00267 Gram-negative porin CLQ46_RS12045 PF01966 HD domain CLQ46_RS12050 PF00145 C-5 cytosine-specific DNA methylase CLQ46_RS12050 PF18284 DNA methylase N-terminal domain CLQ46_RS12055 PF03852 DNA mismatch endonuclease Vsr CLQ46_RS12060 PF00892 EamA-like transporter family CLQ46_RS12065 PF05661 Protein of unknown function (DUF808) CLQ46_RS12070 PF00990 Diguanylate cyclase, GGDEF domain CLQ46_RS12070 PF17151 Periplasmic sensor domain CLQ46_RS12075 PF10733 Protein of unknown function (DUF2525) CLQ46_RS12080 PF10781 Dextransucrase DSRB CLQ46_RS12085 PF00196 Bacterial regulatory proteins, luxR family CLQ46_RS12090 PF13987 YedD-like protein CLQ46_RS12095 PF02806 Alpha amylase, C-terminal all-beta domain CLQ46_RS12095 PF00128 Alpha amylase, catalytic domain CLQ46_RS12100 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ46_RS12105 PF00291 Pyridoxal-phosphate dependent enzyme CLQ46_RS12110 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS12115 PF00005 ABC transporter CLQ46_RS12120 PF03472 Autoinducer binding domain CLQ46_RS12120 PF00196 Bacterial regulatory proteins, luxR family CLQ46_RS12125 PF10769 Protein of unknown function (DUF2594) CLQ46_RS12135 PF00072 Response regulator receiver domain CLQ46_RS12135 PF00196 Bacterial regulatory proteins, luxR family CLQ46_RS12140 PF02151 UvrB/uvrC motif CLQ46_RS12140 PF08459 UvrC Helix-hairpin-helix N-terminal CLQ46_RS12140 PF01541 GIY-YIG catalytic domain CLQ46_RS12145 PF01066 CDP-alcohol phosphatidyltransferase CLQ46_RS12170 PF00701 Dihydrodipicolinate synthetase family CLQ46_RS12175 PF02810 SEC-C motif CLQ46_RS12175 PF03695 Uncharacterised protein family (UPF0149) CLQ46_RS12180 PF03222 Tryptophan/tyrosine permease family CLQ46_RS12185 PF10678 Protein of unknown function (DUF2492) CLQ46_RS12190 PF00210 Ferritin-like domain CLQ46_RS12205 PF07690 Major Facilitator Superfamily CLQ46_RS12210 PF10964 Protein of unknown function (DUF2766) CLQ46_RS12225 PF00210 Ferritin-like domain CLQ46_RS12235 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CLQ46_RS12240 PF00005 ABC transporter CLQ46_RS12245 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS12250 PF02358 Trehalose-phosphatase CLQ46_RS12255 PF00982 Glycosyltransferase family 20 CLQ46_RS12260 PF00582 Universal stress protein family CLQ46_RS12270 PF07470 Glycosyl Hydrolase Family 88 CLQ46_RS12275 PF03485 Arginyl tRNA synthetase N terminal domain CLQ46_RS12275 PF05746 DALR anticodon binding domain CLQ46_RS12275 PF00750 tRNA synthetases class I (R) CLQ46_RS12280 PF06185 YecM protein CLQ46_RS12285 PF03932 CutC family CLQ46_RS12290 PF08003 Protein of unknown function (DUF1698) CLQ46_RS12295 PF13649 Methyltransferase domain CLQ46_RS12300 PF01124 MAPEG family CLQ46_RS12305 PF01904 Protein of unknown function DUF72 CLQ46_RS12310 PF00857 Isochorismatase family CLQ46_RS12315 PF01336 OB-fold nucleic acid binding domain CLQ46_RS12315 PF00152 tRNA synthetases class II (D, K and N) CLQ46_RS12315 PF02938 GAD domain CLQ46_RS12320 PF00293 NUDIX domain CLQ46_RS12325 PF01709 Transcriptional regulator CLQ46_RS12330 PF02075 Crossover junction endodeoxyribonuclease RuvC CLQ46_RS12335 PF07499 RuvA, C-terminal domain CLQ46_RS12335 PF01330 RuvA N terminal domain CLQ46_RS12340 PF05496 Holliday junction DNA helicase RuvB P-loop domain CLQ46_RS12340 PF17864 RuvB AAA lid domain CLQ46_RS12340 PF05491 RuvB C-terminal winged helix domain CLQ46_RS12345 PF00950 ABC 3 transport family CLQ46_RS12350 PF00005 ABC transporter CLQ46_RS12355 PF01297 Zinc-uptake complex component A periplasmic CLQ46_RS12360 PF01551 Peptidase family M23 CLQ46_RS12360 PF08525 Opacity-associated protein A N-terminal motif CLQ46_RS12360 PF01476 LysM domain CLQ46_RS12365 PF03279 Bacterial lipid A biosynthesis acyltransferase CLQ46_RS12370 PF00224 Pyruvate kinase, barrel domain CLQ46_RS12370 PF02887 Pyruvate kinase, alpha/beta domain CLQ46_RS12375 PF01418 Helix-turn-helix domain, rpiR family CLQ46_RS12375 PF01380 SIS domain CLQ46_RS12390 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CLQ46_RS12390 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CLQ46_RS12395 PF00920 Dehydratase family CLQ46_RS12400 PF01081 KDPG and KHG aldolase CLQ46_RS12405 PF02222 ATP-grasp domain CLQ46_RS12410 PF07130 YebG protein CLQ46_RS12415 PF04391 Protein of unknown function (DUF533) CLQ46_RS12420 PF00326 Prolyl oligopeptidase family CLQ46_RS12420 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CLQ46_RS12425 PF00929 Exonuclease CLQ46_RS12430 PF06440 DNA polymerase III, theta subunit CLQ46_RS12435 PF04234 CopC domain CLQ46_RS12440 PF05425 Copper resistance protein D CLQ46_RS12445 PF10709 Protein of unknown function (DUF2511) CLQ46_RS12455 PF04393 Protein of unknown function (DUF535) CLQ46_RS12460 PF00149 Calcineurin-like phosphoesterase CLQ46_RS12465 PF07358 Protein of unknown function (DUF1482) CLQ46_RS12470 PF07351 Protein of unknown function (DUF1480) CLQ46_RS12475 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CLQ46_RS12475 PF01189 16S rRNA methyltransferase RsmB/F CLQ46_RS12475 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CLQ46_RS12480 PF02470 MlaD protein CLQ46_RS12485 PF04403 Paraquat-inducible protein A CLQ46_RS12490 PF13185 GAF domain CLQ46_RS12495 PF17516 ProQ C-terminal domain CLQ46_RS12495 PF04352 ProQ/FINO family CLQ46_RS12500 PF11818 C-terminal domain of tail specific protease (DUF3340) CLQ46_RS12500 PF03572 Peptidase family S41 CLQ46_RS12500 PF17804 Tail specific protease N-terminal domain CLQ46_RS12500 PF00595 PDZ domain CLQ46_RS12505 PF01435 Peptidase family M48 CLQ46_RS12510 PF07690 Major Facilitator Superfamily CLQ46_RS12520 PF09339 IclR helix-turn-helix domain CLQ46_RS12520 PF01614 Bacterial transcriptional regulator CLQ46_RS12525 PF13996 YobH-like protein CLQ46_RS12530 PF13998 MgrB protein CLQ46_RS12535 PF13974 YebO-like protein CLQ46_RS12550 PF10736 Protein of unknown function (DUF2627) CLQ46_RS12555 PF00313 'Cold-shock' DNA-binding domain CLQ46_RS12560 PF03717 Penicillin-binding Protein dimerisation domain CLQ46_RS12560 PF00905 Penicillin binding protein transpeptidase domain CLQ46_RS12565 PF13847 Methyltransferase domain CLQ46_RS12570 PF02659 Putative manganese efflux pump CLQ46_RS12575 PF06173 Protein of unknown function (DUF986) CLQ46_RS12580 PF03613 PTS system mannose/fructose/sorbose family IID component CLQ46_RS12585 PF03609 PTS system sorbose-specific iic component CLQ46_RS12590 PF03830 PTS system sorbose subfamily IIB component CLQ46_RS12590 PF03610 PTS system fructose IIA component CLQ46_RS12595 PF03741 Integral membrane protein TerC family CLQ46_RS12595 PF03471 Transporter associated domain CLQ46_RS12600 PF00563 EAL domain CLQ46_RS12600 PF12792 CSS motif domain associated with EAL CLQ46_RS12605 PF03315 Serine dehydratase beta chain CLQ46_RS12605 PF03313 Serine dehydratase alpha chain CLQ46_RS12610 PF00293 NUDIX domain CLQ46_RS12615 PF00425 chorismate binding enzyme CLQ46_RS12615 PF04715 Anthranilate synthase component I, N terminal region CLQ46_RS12620 PF03701 Uncharacterised protein family (UPF0181) CLQ46_RS12625 PF01042 Endoribonuclease L-PSP CLQ46_RS12630 PF13307 Helicase C-terminal domain CLQ46_RS12630 PF04851 Type III restriction enzyme, res subunit CLQ46_RS12635 PF00814 Glycoprotease family CLQ46_RS12640 PF03843 Outer membrane lipoprotein Slp family CLQ46_RS12645 PF13193 AMP-binding enzyme C-terminal domain CLQ46_RS12645 PF00501 AMP-binding enzyme CLQ46_RS12650 PF01612 3'-5' exonuclease CLQ46_RS12650 PF00570 HRDC domain CLQ46_RS12655 PF03776 Septum formation topological specificity factor MinE CLQ46_RS12660 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CLQ46_RS12665 PF05209 Septum formation inhibitor MinC, N-terminal domain CLQ46_RS12665 PF03775 Septum formation inhibitor MinC, C-terminal domain CLQ46_RS12670 PF05166 YcgL domain CLQ46_RS12675 PF01557 Fumarylacetoacetate (FAA) hydrolase family CLQ46_RS12680 PF03692 Putative zinc- or iron-chelating domain CLQ46_RS12690 PF02600 Disulfide bond formation protein DsbB CLQ46_RS12695 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CLQ46_RS12700 PF07840 FadR C-terminal domain CLQ46_RS12700 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS12705 PF04293 SpoVR like protein CLQ46_RS12710 PF01266 FAD dependent oxidoreductase CLQ46_RS12715 PF00842 Alanine racemase, C-terminal domain CLQ46_RS12715 PF01168 Alanine racemase, N-terminal domain CLQ46_RS12720 PF00999 Sodium/hydrogen exchanger family CLQ46_RS12720 PF02080 TrkA-C domain CLQ46_RS12720 PF03471 Transporter associated domain CLQ46_RS12725 PF17676 LD-carboxypeptidase C-terminal domain CLQ46_RS12725 PF02016 LD-carboxypeptidase N-terminal domain CLQ46_RS12730 PF01464 Transglycosylase SLT domain CLQ46_RS12735 PF07715 TonB-dependent Receptor Plug Domain CLQ46_RS12735 PF00593 TonB dependent receptor CLQ46_RS12740 PF01204 Trehalase CLQ46_RS12750 PF14403 Circularly permuted ATP-grasp type 2 CLQ46_RS12790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS12790 PF03466 LysR substrate binding domain CLQ46_RS12795 PF00291 Pyridoxal-phosphate dependent enzyme CLQ46_RS12800 PF03222 Tryptophan/tyrosine permease family CLQ46_RS12805 PF00871 Acetokinase family CLQ46_RS12810 PF02901 Pyruvate formate lyase-like CLQ46_RS12810 PF01228 Glycine radical CLQ46_RS12815 PF13458 Periplasmic binding protein CLQ46_RS12820 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS12825 PF11862 Domain of unknown function (DUF3382) CLQ46_RS12825 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS12830 PF12399 Branched-chain amino acid ATP-binding cassette transporter CLQ46_RS12830 PF00005 ABC transporter CLQ46_RS12835 PF00005 ABC transporter CLQ46_RS12840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS12840 PF03466 LysR substrate binding domain CLQ46_RS12845 PF01293 Phosphoenolpyruvate carboxykinase CLQ46_RS12855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS12855 PF03466 LysR substrate binding domain CLQ46_RS12860 PF07690 Major Facilitator Superfamily CLQ46_RS12870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS12870 PF03466 LysR substrate binding domain CLQ46_RS12880 PF00849 RNA pseudouridylate synthase CLQ46_RS12885 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CLQ46_RS12915 PF00691 OmpA family CLQ46_RS12915 PF13488 Glycine zipper CLQ46_RS12920 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CLQ46_RS12920 PF04717 Type VI secretion system, phage-baseplate injector CLQ46_RS12920 PF13296 Putative type VI secretion system Rhs element Vgr CLQ46_RS13055 PF13407 Periplasmic binding protein domain CLQ46_RS13065 PF01926 50S ribosome-binding GTPase CLQ46_RS13065 PF06071 Protein of unknown function (DUF933) CLQ46_RS13070 PF01195 Peptidyl-tRNA hydrolase CLQ46_RS13075 PF10762 Protein of unknown function (DUF2583) CLQ46_RS13085 PF01740 STAS domain CLQ46_RS13085 PF00916 Sulfate permease family CLQ46_RS13090 PF14572 Phosphoribosyl synthetase-associated domain CLQ46_RS13090 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CLQ46_RS13100 PF08544 GHMP kinases C terminal CLQ46_RS13100 PF00288 GHMP kinases N terminal domain CLQ46_RS13105 PF03550 Outer membrane lipoprotein LolB CLQ46_RS13110 PF01488 Shikimate / quinate 5-dehydrogenase CLQ46_RS13110 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CLQ46_RS13110 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CLQ46_RS13115 PF03462 PCRF domain CLQ46_RS13115 PF00472 RF-1 domain CLQ46_RS13120 PF17827 PrmC N-terminal domain CLQ46_RS13120 PF13847 Methyltransferase domain CLQ46_RS13125 PF04247 Invasion gene expression up-regulator, SirB CLQ46_RS13130 PF13369 Transglutaminase-like superfamily CLQ46_RS13135 PF00793 DAHP synthetase I family CLQ46_RS13140 PF01699 Sodium/calcium exchanger protein CLQ46_RS13145 PF06150 ChaB CLQ46_RS13150 PF04752 ChaC-like protein CLQ46_RS13160 PF02635 DsrE/DsrF-like family CLQ46_RS13165 PF08376 Nitrate and nitrite sensing CLQ46_RS13165 PF03861 ANTAR domain CLQ46_RS13175 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS13180 PF00005 ABC transporter CLQ46_RS13185 PF18267 Rubredoxin NAD+ reductase C-terminal domain CLQ46_RS13185 PF13806 Rieske-like [2Fe-2S] domain CLQ46_RS13185 PF04324 BFD-like [2Fe-2S] binding domain CLQ46_RS13185 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CLQ46_RS13185 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CLQ46_RS13185 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ46_RS13190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLQ46_RS13190 PF04324 BFD-like [2Fe-2S] binding domain CLQ46_RS13190 PF01568 Molydopterin dinucleotide binding domain CLQ46_RS13190 PF00384 Molybdopterin oxidoreductase CLQ46_RS13195 PF11924 Inverse autotransporter, beta-domain CLQ46_RS13200 PF00196 Bacterial regulatory proteins, luxR family CLQ46_RS13200 PF00072 Response regulator receiver domain CLQ46_RS13205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS13205 PF00672 HAMP domain CLQ46_RS13205 PF07730 Histidine kinase CLQ46_RS13205 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CLQ46_RS13210 PF07690 Major Facilitator Superfamily CLQ46_RS13215 PF01568 Molydopterin dinucleotide binding domain CLQ46_RS13215 PF00384 Molybdopterin oxidoreductase CLQ46_RS13215 PF14710 Respiratory nitrate reductase alpha N-terminal CLQ46_RS13220 PF14711 Respiratory nitrate reductase beta C-terminal CLQ46_RS13220 PF13247 4Fe-4S dicluster domain CLQ46_RS13225 PF02613 Nitrate reductase delta subunit CLQ46_RS13230 PF02665 Nitrate reductase gamma subunit CLQ46_RS13240 PF01037 Lrp/AsnC ligand binding domain CLQ46_RS13275 PF00551 Formyl transferase CLQ46_RS13275 PF01842 ACT domain CLQ46_RS13280 PF02810 SEC-C motif CLQ46_RS13285 PF01734 Patatin-like phospholipase CLQ46_RS13290 PF00072 Response regulator receiver domain CLQ46_RS13295 PF00483 Nucleotidyl transferase CLQ46_RS13300 PF00816 H-NS histone family CLQ46_RS13305 PF00265 Thymidine kinase CLQ46_RS13310 PF00171 Aldehyde dehydrogenase family CLQ46_RS13310 PF00465 Iron-containing alcohol dehydrogenase CLQ46_RS13320 PF01914 MarC family integral membrane protein CLQ46_RS13325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ46_RS13330 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS13335 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS13335 PF12911 N-terminal TM domain of oligopeptide transport permease C CLQ46_RS13340 PF00005 ABC transporter CLQ46_RS13340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ46_RS13345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ46_RS13345 PF00005 ABC transporter CLQ46_RS13350 PF00520 Ion transport protein CLQ46_RS13350 PF00027 Cyclic nucleotide-binding domain CLQ46_RS13355 PF04269 Protein of unknown function, DUF440 CLQ46_RS13360 PF13091 PLD-like domain CLQ46_RS13360 PF13396 Phospholipase_D-nuclease N-terminal CLQ46_RS13370 PF04264 YceI-like domain CLQ46_RS13375 PF03795 YCII-related domain CLQ46_RS13380 PF03544 Gram-negative bacterial TonB protein C-terminal CLQ46_RS13385 PF03881 Fructosamine kinase CLQ46_RS13390 PF11080 Endoribonuclease GhoS CLQ46_RS13395 PF00294 pfkB family carbohydrate kinase CLQ46_RS13400 PF04338 Protein of unknown function, DUF481 CLQ46_RS13410 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLQ46_RS13410 PF03129 Anticodon binding domain CLQ46_RS13410 PF02824 TGS domain CLQ46_RS13410 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLQ46_RS13415 PF05198 Translation initiation factor IF-3, N-terminal domain CLQ46_RS13415 PF00707 Translation initiation factor IF-3, C-terminal domain CLQ46_RS13420 PF01632 Ribosomal protein L35 CLQ46_RS13425 PF00453 Ribosomal protein L20 CLQ46_RS13435 PF01409 tRNA synthetases class II core domain (F) CLQ46_RS13435 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CLQ46_RS13440 PF03484 tRNA synthetase B5 domain CLQ46_RS13440 PF03483 B3/4 domain CLQ46_RS13440 PF03147 Ferredoxin-fold anticodon binding domain CLQ46_RS13440 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CLQ46_RS13440 PF01588 Putative tRNA binding domain CLQ46_RS13445 PF00216 Bacterial DNA-binding protein CLQ46_RS13455 PF01266 FAD dependent oxidoreductase CLQ46_RS13460 PF03466 LysR substrate binding domain CLQ46_RS13460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS13470 PF01032 FecCD transport family CLQ46_RS13475 PF03180 NLPA lipoprotein CLQ46_RS13480 PF00255 Glutathione peroxidase CLQ46_RS13485 PF00005 ABC transporter CLQ46_RS13490 PF00877 NlpC/P60 family CLQ46_RS13495 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CLQ46_RS13500 PF10636 Hemin uptake protein hemP CLQ46_RS13505 PF00793 DAHP synthetase I family CLQ46_RS13510 PF03618 Kinase/pyrophosphorylase CLQ46_RS13515 PF02896 PEP-utilising enzyme, TIM barrel domain CLQ46_RS13515 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CLQ46_RS13515 PF00391 PEP-utilising enzyme, mobile domain CLQ46_RS13525 PF01594 AI-2E family transporter CLQ46_RS13530 PF02913 FAD linked oxidases, C-terminal domain CLQ46_RS13530 PF01565 FAD binding domain CLQ46_RS13530 PF13183 4Fe-4S dicluster domain CLQ46_RS13535 PF03061 Thioesterase superfamily CLQ46_RS13540 PF04226 Transglycosylase associated protein CLQ46_RS13560 PF08267 Cobalamin-independent synthase, N-terminal domain CLQ46_RS13560 PF01717 Cobalamin-independent synthase, Catalytic domain CLQ46_RS13565 PF07690 Major Facilitator Superfamily CLQ46_RS13570 PF00005 ABC transporter CLQ46_RS13575 PF01032 FecCD transport family CLQ46_RS13585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS13585 PF03466 LysR substrate binding domain CLQ46_RS13595 PF00440 Bacterial regulatory proteins, tetR family CLQ46_RS13605 PF00873 AcrB/AcrD/AcrF family CLQ46_RS13610 PF01070 FMN-dependent dehydrogenase CLQ46_RS13615 PF00440 Bacterial regulatory proteins, tetR family CLQ46_RS13630 PF01521 Iron-sulphur cluster biosynthesis CLQ46_RS13635 PF01458 Uncharacterized protein family (UPF0051) CLQ46_RS13640 PF00005 ABC transporter CLQ46_RS13645 PF01458 Uncharacterized protein family (UPF0051) CLQ46_RS13650 PF00266 Aminotransferase class-V CLQ46_RS13655 PF02657 Fe-S metabolism associated domain CLQ46_RS13660 PF01476 LysM domain CLQ46_RS13660 PF03734 L,D-transpeptidase catalytic domain CLQ46_RS13660 PF17969 L,D-transpeptidase C-terminal domain CLQ46_RS13665 PF04728 Lipoprotein leucine-zipper CLQ46_RS13670 PF00224 Pyruvate kinase, barrel domain CLQ46_RS13670 PF02887 Pyruvate kinase, alpha/beta domain CLQ46_RS13680 PF10965 Protein of unknown function (DUF2767) CLQ46_RS13685 PF00440 Bacterial regulatory proteins, tetR family CLQ46_RS13685 PF17926 Tetracyclin repressor-like, C-terminal domain CLQ46_RS13690 PF01261 Xylose isomerase-like TIM barrel CLQ46_RS13690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CLQ46_RS13695 PF07690 Major Facilitator Superfamily CLQ46_RS13700 PF01488 Shikimate / quinate 5-dehydrogenase CLQ46_RS13700 PF08501 Shikimate dehydrogenase substrate binding domain CLQ46_RS13700 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CLQ46_RS13710 PF00005 ABC transporter CLQ46_RS13715 PF01032 FecCD transport family CLQ46_RS13720 PF01497 Periplasmic binding protein CLQ46_RS13725 PF01614 Bacterial transcriptional regulator CLQ46_RS13725 PF09339 IclR helix-turn-helix domain CLQ46_RS13730 PF01494 FAD binding domain CLQ46_RS13735 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CLQ46_RS13740 PF12697 Alpha/beta hydrolase family CLQ46_RS13745 PF01557 Fumarylacetoacetate (FAA) hydrolase family CLQ46_RS13750 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CLQ46_RS13750 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLQ46_RS13755 PF07836 DmpG-like communication domain CLQ46_RS13755 PF00682 HMGL-like CLQ46_RS13760 PF07690 Major Facilitator Superfamily CLQ46_RS13765 PF02578 Multi-copper polyphenol oxidoreductase laccase CLQ46_RS13775 PF05995 Cysteine dioxygenase type I CLQ46_RS13780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS13780 PF03466 LysR substrate binding domain CLQ46_RS13785 PF00296 Luciferase-like monooxygenase CLQ46_RS13805 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS13810 PF00005 ABC transporter CLQ46_RS13815 PF07715 TonB-dependent Receptor Plug Domain CLQ46_RS13820 PF00005 ABC transporter CLQ46_RS13825 PF01032 FecCD transport family CLQ46_RS13830 PF01032 FecCD transport family CLQ46_RS13845 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ46_RS13850 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS13855 PF00005 ABC transporter CLQ46_RS13870 PF07690 Major Facilitator Superfamily CLQ46_RS13885 PF07687 Peptidase dimerisation domain CLQ46_RS13885 PF01546 Peptidase family M20/M25/M40 CLQ46_RS13890 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLQ46_RS13890 PF01568 Molydopterin dinucleotide binding domain CLQ46_RS13890 PF00384 Molybdopterin oxidoreductase CLQ46_RS13895 PF02615 Malate/L-lactate dehydrogenase CLQ46_RS13910 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS13915 PF00005 ABC transporter CLQ46_RS13915 PF08402 TOBE domain CLQ46_RS13925 PF13618 Gluconate 2-dehydrogenase subunit 3 CLQ46_RS13930 PF00732 GMC oxidoreductase CLQ46_RS13930 PF05199 GMC oxidoreductase CLQ46_RS13935 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CLQ46_RS13935 PF00034 Cytochrome c CLQ46_RS13940 PF00005 ABC transporter CLQ46_RS13945 PF03379 CcmB protein CLQ46_RS13950 PF01578 Cytochrome C assembly protein CLQ46_RS13960 PF03100 CcmE CLQ46_RS13965 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CLQ46_RS13965 PF01578 Cytochrome C assembly protein CLQ46_RS13970 PF08534 Redoxin CLQ46_RS13975 PF03918 Cytochrome C biogenesis protein CLQ46_RS14015 PF03544 Gram-negative bacterial TonB protein C-terminal CLQ46_RS14045 PF05598 Transposase domain (DUF772) CLQ46_RS14045 PF01609 Transposase DDE domain CLQ46_RS14060 PF00873 AcrB/AcrD/AcrF family CLQ46_RS14075 PF05598 Transposase domain (DUF772) CLQ46_RS14075 PF01609 Transposase DDE domain CLQ46_RS14090 PF00106 short chain dehydrogenase CLQ46_RS14095 PF00205 Thiamine pyrophosphate enzyme, central domain CLQ46_RS14095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLQ46_RS14095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ46_RS14100 PF03306 Alpha-acetolactate decarboxylase CLQ46_RS14105 PF03466 LysR substrate binding domain CLQ46_RS14105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS14110 PF00106 short chain dehydrogenase CLQ46_RS14120 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CLQ46_RS14120 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CLQ46_RS14130 PF01144 Coenzyme A transferase CLQ46_RS14135 PF01144 Coenzyme A transferase CLQ46_RS14140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS14140 PF03466 LysR substrate binding domain CLQ46_RS14165 PF02913 FAD linked oxidases, C-terminal domain CLQ46_RS14165 PF01565 FAD binding domain CLQ46_RS14170 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS14175 PF00005 ABC transporter CLQ46_RS14185 PF02633 Creatinine amidohydrolase CLQ46_RS14190 PF01042 Endoribonuclease L-PSP CLQ46_RS14195 PF07969 Amidohydrolase family CLQ46_RS14200 PF00111 2Fe-2S iron-sulfur cluster binding domain CLQ46_RS14210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS14210 PF03466 LysR substrate binding domain CLQ46_RS14240 PF03466 LysR substrate binding domain CLQ46_RS14240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS14245 PF16197 Ketoacyl-synthetase C-terminal extension CLQ46_RS14245 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS14245 PF14765 Polyketide synthase dehydratase CLQ46_RS14245 PF00550 Phosphopantetheine attachment site CLQ46_RS14245 PF00698 Acyl transferase domain CLQ46_RS14245 PF08659 KR domain CLQ46_RS14245 PF02801 Beta-ketoacyl synthase, C-terminal domain CLQ46_RS14245 PF00109 Beta-ketoacyl synthase, N-terminal domain CLQ46_RS14250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS14250 PF03466 LysR substrate binding domain CLQ46_RS14255 PF07690 Major Facilitator Superfamily CLQ46_RS14275 PF00005 ABC transporter CLQ46_RS14275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ46_RS14280 PF00005 ABC transporter CLQ46_RS14280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ46_RS14285 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS14290 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS14295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ46_RS14305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CLQ46_RS14310 PF08220 DeoR-like helix-turn-helix domain CLQ46_RS14310 PF00455 DeoR C terminal sensor domain CLQ46_RS14320 PF00484 Carbonic anhydrase CLQ46_RS14340 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CLQ46_RS14340 PF10996 Beta-Casp domain CLQ46_RS14340 PF00753 Metallo-beta-lactamase superfamily CLQ46_RS14350 PF03466 LysR substrate binding domain CLQ46_RS14350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS14380 PF03641 Possible lysine decarboxylase CLQ46_RS14390 PF01554 MatE CLQ46_RS14395 PF00677 Lumazine binding domain CLQ46_RS14405 PF07690 Major Facilitator Superfamily CLQ46_RS14410 PF03466 LysR substrate binding domain CLQ46_RS14410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS14415 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS14425 PF07690 Major Facilitator Superfamily CLQ46_RS14430 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CLQ46_RS14430 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CLQ46_RS14440 PF00877 NlpC/P60 family CLQ46_RS14445 PF00462 Glutaredoxin CLQ46_RS14450 PF00929 Exonuclease CLQ46_RS14455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CLQ46_RS14460 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLQ46_RS14465 PF16925 Tetracyclin repressor-like, C-terminal domain CLQ46_RS14465 PF00440 Bacterial regulatory proteins, tetR family CLQ46_RS14470 PF06945 Protein of unknown function (DUF1289) CLQ46_RS14475 PF00248 Aldo/keto reductase family CLQ46_RS14480 PF00080 Copper/zinc superoxide dismutase (SODC) CLQ46_RS14485 PF04632 Fusaric acid resistance protein family CLQ46_RS14490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ46_RS14490 PF00529 HlyD membrane-fusion protein of T1SS CLQ46_RS14495 PF07869 Protein of unknown function (DUF1656) CLQ46_RS14500 PF01047 MarR family CLQ46_RS14505 PF00990 Diguanylate cyclase, GGDEF domain CLQ46_RS14505 PF17158 Membrane-associated sensor, integral membrane domain CLQ46_RS14510 PF05433 Glycine zipper 2TM domain CLQ46_RS14515 PF03702 Anhydro-N-acetylmuramic acid kinase CLQ46_RS14520 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CLQ46_RS14525 PF01243 Pyridoxamine 5'-phosphate oxidase CLQ46_RS14525 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CLQ46_RS14530 PF00579 tRNA synthetases class I (W and Y) CLQ46_RS14535 PF08543 Phosphomethylpyrimidine kinase CLQ46_RS14540 PF00043 Glutathione S-transferase, C-terminal domain CLQ46_RS14540 PF02798 Glutathione S-transferase, N-terminal domain CLQ46_RS14545 PF00854 POT family CLQ46_RS14555 PF00730 HhH-GPD superfamily base excision DNA repair protein CLQ46_RS14555 PF10576 Iron-sulfur binding domain of endonuclease III CLQ46_RS14555 PF00633 Helix-hairpin-helix motif CLQ46_RS14560 PF02508 Rnf-Nqr subunit, membrane protein CLQ46_RS14565 PF04205 FMN-binding domain CLQ46_RS14570 PF03116 NQR2, RnfD, RnfE family CLQ46_RS14575 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLQ46_RS14575 PF12838 4Fe-4S dicluster domain CLQ46_RS14575 PF13375 RnfC Barrel sandwich hybrid domain CLQ46_RS14575 PF10531 SLBB domain CLQ46_RS14580 PF04060 Putative Fe-S cluster CLQ46_RS14585 PF02508 Rnf-Nqr subunit, membrane protein CLQ46_RS14590 PF10754 Protein of unknown function (DUF2569) CLQ46_RS14595 PF05321 Haemolysin expression modulating protein CLQ46_RS14600 PF00232 Glycosyl hydrolase family 1 CLQ46_RS14610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ46_RS14610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLQ46_RS14615 PF00962 Adenosine/AMP deaminase CLQ46_RS14620 PF07690 Major Facilitator Superfamily CLQ46_RS14625 PF01638 HxlR-like helix-turn-helix CLQ46_RS14640 PF01292 Prokaryotic cytochrome b561 CLQ46_RS14645 PF02583 Metal-sensitive transcriptional repressor CLQ46_RS14650 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS14650 PF00107 Zinc-binding dehydrogenase CLQ46_RS14655 PF01011 PQQ enzyme repeat CLQ46_RS14660 PF03466 LysR substrate binding domain CLQ46_RS14660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS14665 PF00775 Dioxygenase CLQ46_RS14670 PF00775 Dioxygenase CLQ46_RS14670 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CLQ46_RS14675 PF07063 Domain of unknown function (DUF1338) CLQ46_RS14680 PF00135 Carboxylesterase family CLQ46_RS14685 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS14685 PF00107 Zinc-binding dehydrogenase CLQ46_RS14690 PF04349 Periplasmic glucan biosynthesis protein, MdoG CLQ46_RS14695 PF13302 Acetyltransferase (GNAT) domain CLQ46_RS14700 PF18836 Beta solenoid repeat from YDCK CLQ46_RS14705 PF03595 Voltage-dependent anion channel CLQ46_RS14710 PF03848 Tellurite resistance protein TehB CLQ46_RS14715 PF11769 Protein of unknown function (DUF3313) CLQ46_RS14725 PF06445 GyrI-like small molecule binding domain CLQ46_RS14725 PF12833 Helix-turn-helix domain CLQ46_RS14730 PF03594 Benzoate membrane transport protein CLQ46_RS14735 PF01381 Helix-turn-helix CLQ46_RS14735 PF07883 Cupin domain CLQ46_RS14745 PF01136 Peptidase family U32 CLQ46_RS14745 PF12392 Collagenase CLQ46_RS14765 PF02322 Cytochrome bd terminal oxidase subunit II CLQ46_RS14770 PF01654 Cytochrome bd terminal oxidase subunit I CLQ46_RS14775 PF00155 Aminotransferase class I and II CLQ46_RS14775 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS14780 PF13416 Bacterial extracellular solute-binding protein CLQ46_RS14785 PF08402 TOBE domain CLQ46_RS14785 PF00005 ABC transporter CLQ46_RS14790 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS14795 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS14800 PF00171 Aldehyde dehydrogenase family CLQ46_RS14820 PF10753 Toxin GhoT_OrtT CLQ46_RS14825 PF00364 Biotin-requiring enzyme CLQ46_RS14825 PF00561 alpha/beta hydrolase fold CLQ46_RS14830 PF00171 Aldehyde dehydrogenase family CLQ46_RS14835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ46_RS14840 PF10735 Protein of unknown function (DUF2526) CLQ46_RS14845 PF04657 Putative inner membrane exporter, YdcZ CLQ46_RS14850 PF00583 Acetyltransferase (GNAT) family CLQ46_RS14855 PF01381 Helix-turn-helix CLQ46_RS14855 PF08671 Anti-repressor SinI CLQ46_RS14860 PF16884 N-terminal domain of oxidoreductase CLQ46_RS14860 PF00107 Zinc-binding dehydrogenase CLQ46_RS14865 PF01156 Inosine-uridine preferring nucleoside hydrolase CLQ46_RS14875 PF04175 Protein of unknown function (DUF406) CLQ46_RS14880 PF01979 Amidohydrolase family CLQ46_RS14885 PF00593 TonB dependent receptor CLQ46_RS14885 PF07715 TonB-dependent Receptor Plug Domain CLQ46_RS14900 PF00324 Amino acid permease CLQ46_RS14910 PF01202 Shikimate kinase CLQ46_RS14915 PF00296 Luciferase-like monooxygenase CLQ46_RS14920 PF07687 Peptidase dimerisation domain CLQ46_RS14920 PF01546 Peptidase family M20/M25/M40 CLQ46_RS14925 PF00296 Luciferase-like monooxygenase CLQ46_RS14930 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ46_RS14940 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS14945 PF00005 ABC transporter CLQ46_RS14955 PF13417 Glutathione S-transferase, N-terminal domain CLQ46_RS14960 PF01361 Tautomerase enzyme CLQ46_RS14980 PF02264 LamB porin CLQ46_RS14980 PF11471 Maltoporin periplasmic N-terminal extension CLQ46_RS14995 PF02311 AraC-like ligand binding domain CLQ46_RS14995 PF12833 Helix-turn-helix domain CLQ46_RS15000 PF01613 Flavin reductase like domain CLQ46_RS15005 PF00005 ABC transporter CLQ46_RS15005 PF17912 MalK OB fold domain CLQ46_RS15015 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS15020 PF00797 N-acetyltransferase CLQ46_RS15025 PF02665 Nitrate reductase gamma subunit CLQ46_RS15030 PF02613 Nitrate reductase delta subunit CLQ46_RS15035 PF13247 4Fe-4S dicluster domain CLQ46_RS15035 PF14711 Respiratory nitrate reductase beta C-terminal CLQ46_RS15040 PF14710 Respiratory nitrate reductase alpha N-terminal CLQ46_RS15040 PF01568 Molydopterin dinucleotide binding domain CLQ46_RS15040 PF00384 Molybdopterin oxidoreductase CLQ46_RS15045 PF07690 Major Facilitator Superfamily CLQ46_RS15055 PF07690 Major Facilitator Superfamily CLQ46_RS15060 PF01614 Bacterial transcriptional regulator CLQ46_RS15060 PF09339 IclR helix-turn-helix domain CLQ46_RS15065 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CLQ46_RS15065 PF13378 Enolase C-terminal domain-like CLQ46_RS15070 PF02426 Muconolactone delta-isomerase CLQ46_RS15075 PF00775 Dioxygenase CLQ46_RS15075 PF04444 Catechol dioxygenase N terminus CLQ46_RS15080 PF00355 Rieske [2Fe-2S] domain CLQ46_RS15080 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CLQ46_RS15085 PF00866 Ring hydroxylating beta subunit CLQ46_RS15090 PF00175 Oxidoreductase NAD-binding domain CLQ46_RS15090 PF00970 Oxidoreductase FAD-binding domain CLQ46_RS15090 PF00111 2Fe-2S iron-sulfur cluster binding domain CLQ46_RS15095 PF00106 short chain dehydrogenase CLQ46_RS15100 PF00892 EamA-like transporter family CLQ46_RS15105 PF01568 Molydopterin dinucleotide binding domain CLQ46_RS15105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLQ46_RS15105 PF00384 Molybdopterin oxidoreductase CLQ46_RS15110 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLQ46_RS15110 PF00384 Molybdopterin oxidoreductase CLQ46_RS15110 PF01568 Molydopterin dinucleotide binding domain CLQ46_RS15115 PF09163 Formate dehydrogenase N, transmembrane CLQ46_RS15115 PF12800 4Fe-4S binding domain CLQ46_RS15115 PF13247 4Fe-4S dicluster domain CLQ46_RS15120 PF01292 Prokaryotic cytochrome b561 CLQ46_RS15135 PF03976 Polyphosphate kinase 2 (PPK2) CLQ46_RS15145 PF07690 Major Facilitator Superfamily CLQ46_RS15155 PF00296 Luciferase-like monooxygenase CLQ46_RS15160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ46_RS15160 PF00005 ABC transporter CLQ46_RS15165 PF12911 N-terminal TM domain of oligopeptide transport permease C CLQ46_RS15165 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS15170 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS15175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ46_RS15180 PF00107 Zinc-binding dehydrogenase CLQ46_RS15180 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS15185 PF00719 Inorganic pyrophosphatase CLQ46_RS15195 PF00005 ABC transporter CLQ46_RS15195 PF12848 ABC transporter CLQ46_RS15210 PF03949 Malic enzyme, NAD binding domain CLQ46_RS15210 PF00390 Malic enzyme, N-terminal domain CLQ46_RS15215 PF08136 30S ribosomal protein subunit S22 family CLQ46_RS15225 PF03466 LysR substrate binding domain CLQ46_RS15225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS15230 PF10820 Protein of unknown function (DUF2543) CLQ46_RS15240 PF10685 Stress-induced bacterial acidophilic repeat motif CLQ46_RS15255 PF05974 Domain of unknown function (DUF892) CLQ46_RS15265 PF16657 Maltogenic Amylase, C-terminal domain CLQ46_RS15265 PF00128 Alpha amylase, catalytic domain CLQ46_RS15270 PF00106 short chain dehydrogenase CLQ46_RS15275 PF04239 Protein of unknown function (DUF421) CLQ46_RS15285 PF04076 Bacterial OB fold (BOF) protein CLQ46_RS15290 PF02566 OsmC-like protein CLQ46_RS15310 PF16916 Dimerisation domain of Zinc Transporter CLQ46_RS15310 PF01545 Cation efflux family CLQ46_RS15315 PF01062 Bestrophin, RFP-TM, chloride channel CLQ46_RS15320 PF00384 Molybdopterin oxidoreductase CLQ46_RS15325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS15325 PF03466 LysR substrate binding domain CLQ46_RS15330 PF02378 Phosphotransferase system, EIIC CLQ46_RS15355 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ46_RS15360 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CLQ46_RS15365 PF00083 Sugar (and other) transporter CLQ46_RS15375 PF02308 MgtC family CLQ46_RS15380 PF03969 AFG1-like ATPase CLQ46_RS15385 PF00141 Peroxidase CLQ46_RS15390 PF03466 LysR substrate binding domain CLQ46_RS15390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS15405 PF00905 Penicillin binding protein transpeptidase domain CLQ46_RS15405 PF03717 Penicillin-binding Protein dimerisation domain CLQ46_RS15410 PF00958 GMP synthase C terminal domain CLQ46_RS15410 PF00117 Glutamine amidotransferase class-I CLQ46_RS15410 PF02540 NAD synthase CLQ46_RS15415 PF00675 Insulinase (Peptidase family M16) CLQ46_RS15420 PF04055 Radical SAM superfamily CLQ46_RS15420 PF13186 Iron-sulfur cluster-binding domain CLQ46_RS15425 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CLQ46_RS15430 PF03070 TENA/THI-4/PQQC family CLQ46_RS15435 PF12706 Beta-lactamase superfamily domain CLQ46_RS15440 PF08042 PqqA family CLQ46_RS15445 PF01244 Membrane dipeptidase (Peptidase family M19) CLQ46_RS15450 PF00561 alpha/beta hydrolase fold CLQ46_RS15455 PF00072 Response regulator receiver domain CLQ46_RS15455 PF00486 Transcriptional regulatory protein, C terminal CLQ46_RS15460 PF00672 HAMP domain CLQ46_RS15460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS15460 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS15465 PF02683 Cytochrome C biogenesis protein transmembrane region CLQ46_RS15465 PF17991 Thioredoxin like C-terminal domain CLQ46_RS15465 PF00578 AhpC/TSA family CLQ46_RS15475 PF00282 Pyridoxal-dependent decarboxylase conserved domain CLQ46_RS15480 PF00202 Aminotransferase class-III CLQ46_RS15485 PF09084 NMT1/THI5 like CLQ46_RS15490 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS15495 PF00005 ABC transporter CLQ46_RS15500 PF03070 TENA/THI-4/PQQC family CLQ46_RS15510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ46_RS15510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLQ46_RS15520 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS15525 PF00990 Diguanylate cyclase, GGDEF domain CLQ46_RS15525 PF08448 PAS fold CLQ46_RS15530 PF01979 Amidohydrolase family CLQ46_RS15535 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CLQ46_RS15545 PF01177 Asp/Glu/Hydantoin racemase CLQ46_RS15570 PF00300 Histidine phosphatase superfamily (branch 1) CLQ46_RS15580 PF00857 Isochorismatase family CLQ46_RS15590 PF00106 short chain dehydrogenase CLQ46_RS15595 PF00117 Glutamine amidotransferase class-I CLQ46_RS15620 PF00109 Beta-ketoacyl synthase, N-terminal domain CLQ46_RS15620 PF02801 Beta-ketoacyl synthase, C-terminal domain CLQ46_RS15625 PF07690 Major Facilitator Superfamily CLQ46_RS15630 PF13533 Biotin-lipoyl like CLQ46_RS15640 PF02774 Semialdehyde dehydrogenase, dimerisation domain CLQ46_RS15640 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLQ46_RS15655 PF01425 Amidase CLQ46_RS15680 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS15685 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS15690 PF00005 ABC transporter CLQ46_RS15695 PF00266 Aminotransferase class-V CLQ46_RS15700 PF07687 Peptidase dimerisation domain CLQ46_RS15700 PF01546 Peptidase family M20/M25/M40 CLQ46_RS15705 PF03060 Nitronate monooxygenase CLQ46_RS15710 PF03466 LysR substrate binding domain CLQ46_RS15710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS15720 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLQ46_RS15725 PF13454 FAD-NAD(P)-binding CLQ46_RS15730 PF07690 Major Facilitator Superfamily CLQ46_RS15730 PF00083 Sugar (and other) transporter CLQ46_RS15745 PF00440 Bacterial regulatory proteins, tetR family CLQ46_RS15760 PF07690 Major Facilitator Superfamily CLQ46_RS15770 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS15775 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ46_RS15785 PF03611 PTS system sugar-specific permease component CLQ46_RS15790 PF00834 Ribulose-phosphate 3 epimerase family CLQ46_RS15800 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ46_RS15805 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ46_RS15805 PF02378 Phosphotransferase system, EIIC CLQ46_RS15810 PF01810 LysE type translocator CLQ46_RS15825 PF01609 Transposase DDE domain CLQ46_RS15825 PF05598 Transposase domain (DUF772) CLQ46_RS15835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS15835 PF03466 LysR substrate binding domain CLQ46_RS15840 PF00753 Metallo-beta-lactamase superfamily CLQ46_RS15850 PF01546 Peptidase family M20/M25/M40 CLQ46_RS15850 PF07687 Peptidase dimerisation domain CLQ46_RS15860 PF02126 Phosphotriesterase family CLQ46_RS15865 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS15870 PF00005 ABC transporter CLQ46_RS15875 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS15885 PF00294 pfkB family carbohydrate kinase CLQ46_RS15905 PF04972 BON domain CLQ46_RS15905 PF01476 LysM domain CLQ46_RS15920 PF00258 Flavodoxin CLQ46_RS15920 PF01613 Flavin reductase like domain CLQ46_RS15925 PF07690 Major Facilitator Superfamily CLQ46_RS15940 PF00672 HAMP domain CLQ46_RS15940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS15940 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS15945 PF02954 Bacterial regulatory protein, Fis family CLQ46_RS15945 PF00072 Response regulator receiver domain CLQ46_RS15945 PF14532 Sigma-54 interaction domain CLQ46_RS15950 PF04229 GrpB protein CLQ46_RS15950 PF13673 Acetyltransferase (GNAT) domain CLQ46_RS15955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS15955 PF03466 LysR substrate binding domain CLQ46_RS15960 PF00248 Aldo/keto reductase family CLQ46_RS15965 PF00248 Aldo/keto reductase family CLQ46_RS15975 PF00248 Aldo/keto reductase family CLQ46_RS15985 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CLQ46_RS15985 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLQ46_RS15990 PF12833 Helix-turn-helix domain CLQ46_RS15990 PF01965 DJ-1/PfpI family CLQ46_RS16000 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CLQ46_RS16015 PF08220 DeoR-like helix-turn-helix domain CLQ46_RS16015 PF00455 DeoR C terminal sensor domain CLQ46_RS16020 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ46_RS16020 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ46_RS16025 PF01791 DeoC/LacD family aldolase CLQ46_RS16030 PF00455 DeoR C terminal sensor domain CLQ46_RS16030 PF08220 DeoR-like helix-turn-helix domain CLQ46_RS16035 PF00834 Ribulose-phosphate 3 epimerase family CLQ46_RS16040 PF00294 pfkB family carbohydrate kinase CLQ46_RS16045 PF07690 Major Facilitator Superfamily CLQ46_RS16055 PF13193 AMP-binding enzyme C-terminal domain CLQ46_RS16055 PF00501 AMP-binding enzyme CLQ46_RS16060 PF01144 Coenzyme A transferase CLQ46_RS16070 PF00108 Thiolase, N-terminal domain CLQ46_RS16070 PF02803 Thiolase, C-terminal domain CLQ46_RS16075 PF07690 Major Facilitator Superfamily CLQ46_RS16080 PF08450 SMP-30/Gluconolactonase/LRE-like region CLQ46_RS16090 PF02595 Glycerate kinase family CLQ46_RS16095 PF13556 PucR C-terminal helix-turn-helix domain CLQ46_RS16095 PF05651 Putative sugar diacid recognition CLQ46_RS16095 PF17853 GGDEF-like domain CLQ46_RS16100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CLQ46_RS16100 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CLQ46_RS16105 PF03466 LysR substrate binding domain CLQ46_RS16105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS16115 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS16115 PF07729 FCD domain CLQ46_RS16120 PF00367 phosphotransferase system, EIIB CLQ46_RS16120 PF02378 Phosphotransferase system, EIIC CLQ46_RS16125 PF02056 Family 4 glycosyl hydrolase CLQ46_RS16125 PF11975 Family 4 glycosyl hydrolase C-terminal domain CLQ46_RS16135 PF00083 Sugar (and other) transporter CLQ46_RS16140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ46_RS16140 PF00381 PTS HPr component phosphorylation site CLQ46_RS16150 PF00756 Putative esterase CLQ46_RS16155 PF03707 Bacterial signalling protein N terminal repeat CLQ46_RS16155 PF00563 EAL domain CLQ46_RS16155 PF00990 Diguanylate cyclase, GGDEF domain CLQ46_RS16155 PF13188 PAS domain CLQ46_RS16170 PF00557 Metallopeptidase family M24 CLQ46_RS16185 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CLQ46_RS16185 PF02753 Pili assembly chaperone PapD, C-terminal domain CLQ46_RS16190 PF13953 PapC C-terminal domain CLQ46_RS16190 PF13954 PapC N-terminal domain CLQ46_RS16190 PF00577 Outer membrane usher protein CLQ46_RS16200 PF02638 Glycosyl hydrolase-like 10 CLQ46_RS16205 PF13657 HipA N-terminal domain CLQ46_RS16205 PF07804 HipA-like C-terminal domain CLQ46_RS16210 PF01381 Helix-turn-helix CLQ46_RS16215 PF00576 HIUase/Transthyretin family CLQ46_RS16220 PF01014 Uricase CLQ46_RS16220 PF09349 OHCU decarboxylase CLQ46_RS16225 PF00860 Permease family CLQ46_RS16230 PF01494 FAD binding domain CLQ46_RS16235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS16235 PF03466 LysR substrate binding domain CLQ46_RS16240 PF00355 Rieske [2Fe-2S] domain CLQ46_RS16245 PF00111 2Fe-2S iron-sulfur cluster binding domain CLQ46_RS16250 PF07690 Major Facilitator Superfamily CLQ46_RS16255 PF12833 Helix-turn-helix domain CLQ46_RS16270 PF09905 DNA-binding protein VF530 CLQ46_RS16280 PF03180 NLPA lipoprotein CLQ46_RS16285 PF09383 NIL domain CLQ46_RS16285 PF00005 ABC transporter CLQ46_RS16290 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS16295 PF03060 Nitronate monooxygenase CLQ46_RS16300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS16300 PF03466 LysR substrate binding domain CLQ46_RS16305 PF06779 Uncharacterised MFS-type transporter YbfB CLQ46_RS16320 PF07690 Major Facilitator Superfamily CLQ46_RS16330 PF13649 Methyltransferase domain CLQ46_RS16370 PF00583 Acetyltransferase (GNAT) family CLQ46_RS16375 PF01232 Mannitol dehydrogenase Rossmann domain CLQ46_RS16375 PF08125 Mannitol dehydrogenase C-terminal domain CLQ46_RS16385 PF00990 Diguanylate cyclase, GGDEF domain CLQ46_RS16390 PF13811 Domain of unknown function (DUF4186) CLQ46_RS16395 PF04960 Glutaminase CLQ46_RS16400 PF00171 Aldehyde dehydrogenase family CLQ46_RS16405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS16405 PF03466 LysR substrate binding domain CLQ46_RS16410 PF00583 Acetyltransferase (GNAT) family CLQ46_RS16415 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CLQ46_RS16415 PF00056 lactate/malate dehydrogenase, NAD binding domain CLQ46_RS16420 PF08220 DeoR-like helix-turn-helix domain CLQ46_RS16420 PF00455 DeoR C terminal sensor domain CLQ46_RS16425 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CLQ46_RS16430 PF17042 Nucleotide-binding C-terminal domain CLQ46_RS16430 PF07005 Sugar-binding N-terminal domain CLQ46_RS16435 PF00465 Iron-containing alcohol dehydrogenase CLQ46_RS16440 PF00701 Dihydrodipicolinate synthetase family CLQ46_RS16455 PF04074 YhcH/YjgK/YiaL CLQ46_RS16465 PF02567 Phenazine biosynthesis-like protein CLQ46_RS16470 PF07690 Major Facilitator Superfamily CLQ46_RS16475 PF01914 MarC family integral membrane protein CLQ46_RS16480 PF01047 MarR family CLQ46_RS16485 PF12833 Helix-turn-helix domain CLQ46_RS16490 PF13999 MarB protein CLQ46_RS16495 PF00892 EamA-like transporter family CLQ46_RS16500 PF07690 Major Facilitator Superfamily CLQ46_RS16510 PF00005 ABC transporter CLQ46_RS16515 PF00005 ABC transporter CLQ46_RS16520 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS16525 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS16530 PF13458 Periplasmic binding protein CLQ46_RS16535 PF01717 Cobalamin-independent synthase, Catalytic domain CLQ46_RS16545 PF12833 Helix-turn-helix domain CLQ46_RS16545 PF01965 DJ-1/PfpI family CLQ46_RS16560 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS16565 PF02837 Glycosyl hydrolases family 2, sugar binding domain CLQ46_RS16565 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CLQ46_RS16565 PF00703 Glycosyl hydrolases family 2 CLQ46_RS16565 PF02929 Beta galactosidase small chain CLQ46_RS16565 PF16353 Domain of unknown function(DUF4981) CLQ46_RS16570 PF01306 LacY proton/sugar symporter CLQ46_RS16575 PF02463 RecF/RecN/SMC N terminal domain CLQ46_RS16590 PF00455 DeoR C terminal sensor domain CLQ46_RS16590 PF08220 DeoR-like helix-turn-helix domain CLQ46_RS16600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CLQ46_RS16600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CLQ46_RS16605 PF17042 Nucleotide-binding C-terminal domain CLQ46_RS16605 PF07005 Sugar-binding N-terminal domain CLQ46_RS16610 PF00596 Class II Aldolase and Adducin N-terminal domain CLQ46_RS16615 PF01261 Xylose isomerase-like TIM barrel CLQ46_RS16620 PF02447 GntP family permease CLQ46_RS16625 PF12833 Helix-turn-helix domain CLQ46_RS16640 PF00563 EAL domain CLQ46_RS16640 PF04940 Sensors of blue-light using FAD CLQ46_RS16645 PF02464 Competence-damaged protein CLQ46_RS16650 PF00011 Hsp20/alpha crystallin family CLQ46_RS16660 PF00072 Response regulator receiver domain CLQ46_RS16660 PF00196 Bacterial regulatory proteins, luxR family CLQ46_RS16665 PF02586 SOS response associated peptidase (SRAP) CLQ46_RS16670 PF12833 Helix-turn-helix domain CLQ46_RS16670 PF02311 AraC-like ligand binding domain CLQ46_RS16680 PF01432 Peptidase family M3 CLQ46_RS16685 PF00106 short chain dehydrogenase CLQ46_RS16690 PF07729 FCD domain CLQ46_RS16690 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS16695 PF00582 Universal stress protein family CLQ46_RS16700 PF08125 Mannitol dehydrogenase C-terminal domain CLQ46_RS16700 PF01232 Mannitol dehydrogenase Rossmann domain CLQ46_RS16705 PF07690 Major Facilitator Superfamily CLQ46_RS16710 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CLQ46_RS16715 PF06932 Protein of unknown function (DUF1283) CLQ46_RS16720 PF13302 Acetyltransferase (GNAT) domain CLQ46_RS16725 PF06788 Uncharacterised protein family (UPF0257) CLQ46_RS16730 PF06649 Protein of unknown function (DUF1161) CLQ46_RS16735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLQ46_RS16735 PF00384 Molybdopterin oxidoreductase CLQ46_RS16735 PF01568 Molydopterin dinucleotide binding domain CLQ46_RS16740 PF13247 4Fe-4S dicluster domain CLQ46_RS16740 PF12800 4Fe-4S binding domain CLQ46_RS16745 PF04976 DMSO reductase anchor subunit (DmsC) CLQ46_RS16750 PF02613 Nitrate reductase delta subunit CLQ46_RS16755 PF00654 Voltage gated chloride channel CLQ46_RS16765 PF00480 ROK family CLQ46_RS16770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS16770 PF03466 LysR substrate binding domain CLQ46_RS16775 PF07690 Major Facilitator Superfamily CLQ46_RS16780 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CLQ46_RS16790 PF00089 Trypsin CLQ46_RS16800 PF00893 Small Multidrug Resistance protein CLQ46_RS16805 PF00893 Small Multidrug Resistance protein CLQ46_RS16810 PF01594 AI-2E family transporter CLQ46_RS16815 PF16957 Malonate decarboxylase, alpha subunit, transporter CLQ46_RS16820 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CLQ46_RS16825 PF06857 Malonate decarboxylase delta subunit (MdcD) CLQ46_RS16830 PF01039 Carboxyl transferase domain CLQ46_RS16840 PF03547 Membrane transport protein CLQ46_RS16845 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG CLQ46_RS16850 PF00698 Acyl transferase domain CLQ46_RS16855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS16855 PF03466 LysR substrate binding domain CLQ46_RS16860 PF06039 Malate:quinone oxidoreductase (Mqo) CLQ46_RS16865 PF13580 SIS domain CLQ46_RS16875 PF00989 PAS fold CLQ46_RS16875 PF17203 Single cache domain 3 CLQ46_RS16875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS16875 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CLQ46_RS16880 PF00072 Response regulator receiver domain CLQ46_RS16885 PF02424 ApbE family CLQ46_RS16890 PF14537 Cytochrome c3 CLQ46_RS16890 PF00890 FAD binding domain CLQ46_RS16900 PF00939 Sodium:sulfate symporter transmembrane region CLQ46_RS16905 PF05681 Fumarate hydratase (Fumerase) CLQ46_RS16905 PF05683 Fumarase C-terminus CLQ46_RS16925 PF02627 Carboxymuconolactone decarboxylase family CLQ46_RS16930 PF12146 Serine aminopeptidase, S33 CLQ46_RS16935 PF10397 Adenylosuccinate lyase C-terminus CLQ46_RS16935 PF00206 Lyase CLQ46_RS16940 PF02803 Thiolase, C-terminal domain CLQ46_RS16940 PF00108 Thiolase, N-terminal domain CLQ46_RS16945 PF01144 Coenzyme A transferase CLQ46_RS16950 PF01144 Coenzyme A transferase CLQ46_RS16955 PF01614 Bacterial transcriptional regulator CLQ46_RS16955 PF09339 IclR helix-turn-helix domain CLQ46_RS16960 PF01713 Smr domain CLQ46_RS16965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS16965 PF03466 LysR substrate binding domain CLQ46_RS16970 PF07687 Peptidase dimerisation domain CLQ46_RS16970 PF01546 Peptidase family M20/M25/M40 CLQ46_RS16975 PF01546 Peptidase family M20/M25/M40 CLQ46_RS16980 PF03806 AbgT putative transporter family CLQ46_RS16990 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CLQ46_RS16990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CLQ46_RS16995 PF00027 Cyclic nucleotide-binding domain CLQ46_RS16995 PF00325 Bacterial regulatory proteins, crp family CLQ46_RS17000 PF00582 Universal stress protein family CLQ46_RS17005 PF15930 Domain of unknown function CLQ46_RS17010 PF02233 NAD(P) transhydrogenase beta subunit CLQ46_RS17015 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CLQ46_RS17015 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CLQ46_RS17015 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CLQ46_RS17025 PF07338 Protein of unknown function (DUF1471) CLQ46_RS17035 PF13520 Amino acid permease CLQ46_RS17045 PF06942 GlpM protein CLQ46_RS17050 PF00072 Response regulator receiver domain CLQ46_RS17050 PF00486 Transcriptional regulatory protein, C terminal CLQ46_RS17060 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS17060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS17060 PF00672 HAMP domain CLQ46_RS17065 PF05472 DNA replication terminus site-binding protein (Ter protein) CLQ46_RS17070 PF00206 Lyase CLQ46_RS17070 PF10415 Fumarase C C-terminus CLQ46_RS17075 PF05683 Fumarase C-terminus CLQ46_RS17075 PF05681 Fumarate hydratase (Fumerase) CLQ46_RS17080 PF01238 Phosphomannose isomerase type I CLQ46_RS17085 PF06097 Bacterial protein of unknown function (DUF945) CLQ46_RS17090 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CLQ46_RS17090 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS17095 PF00367 phosphotransferase system, EIIB CLQ46_RS17095 PF02378 Phosphotransferase system, EIIC CLQ46_RS17100 PF00155 Aminotransferase class I and II CLQ46_RS17110 PF14001 YdfZ protein CLQ46_RS17125 PF04143 Sulphur transport CLQ46_RS17130 PF01206 Sulfurtransferase TusA CLQ46_RS17135 PF07166 Protein of unknown function (DUF1398) CLQ46_RS17140 PF01679 Proteolipid membrane potential modulator CLQ46_RS17145 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLQ46_RS17145 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CLQ46_RS17150 PF00171 Aldehyde dehydrogenase family CLQ46_RS17155 PF02698 DUF218 domain CLQ46_RS17160 PF00083 Sugar (and other) transporter CLQ46_RS17160 PF07690 Major Facilitator Superfamily CLQ46_RS17165 PF00324 Amino acid permease CLQ46_RS17170 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CLQ46_RS17175 PF04996 Succinylarginine dihydrolase CLQ46_RS17180 PF00171 Aldehyde dehydrogenase family CLQ46_RS17185 PF04958 Arginine N-succinyltransferase beta subunit CLQ46_RS17190 PF00202 Aminotransferase class-III CLQ46_RS17195 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CLQ46_RS17195 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CLQ46_RS17200 PF00248 Aldo/keto reductase family CLQ46_RS17205 PF03466 LysR substrate binding domain CLQ46_RS17205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS17220 PF13533 Biotin-lipoyl like CLQ46_RS17225 PF02321 Outer membrane efflux protein CLQ46_RS17230 PF01596 O-methyltransferase CLQ46_RS17235 PF04408 Helicase associated domain (HA2) CLQ46_RS17235 PF00271 Helicase conserved C-terminal domain CLQ46_RS17235 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CLQ46_RS17235 PF11898 Domain of unknown function (DUF3418) CLQ46_RS17235 PF00270 DEAD/DEAH box helicase CLQ46_RS17240 PF02525 Flavodoxin-like fold CLQ46_RS17250 PF00132 Bacterial transferase hexapeptide (six repeats) CLQ46_RS17255 PF07848 PaaX-like protein CLQ46_RS17255 PF08223 PaaX-like protein C-terminal domain CLQ46_RS17260 PF14535 AMP-binding enzyme C-terminal domain CLQ46_RS17260 PF00501 AMP-binding enzyme CLQ46_RS17265 PF00108 Thiolase, N-terminal domain CLQ46_RS17265 PF02803 Thiolase, C-terminal domain CLQ46_RS17270 PF03061 Thioesterase superfamily CLQ46_RS17275 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CLQ46_RS17275 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CLQ46_RS17275 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CLQ46_RS17280 PF00378 Enoyl-CoA hydratase/isomerase CLQ46_RS17285 PF00378 Enoyl-CoA hydratase/isomerase CLQ46_RS17290 PF00175 Oxidoreductase NAD-binding domain CLQ46_RS17290 PF00111 2Fe-2S iron-sulfur cluster binding domain CLQ46_RS17290 PF00970 Oxidoreductase FAD-binding domain CLQ46_RS17295 PF01883 Iron-sulfur cluster assembly protein CLQ46_RS17300 PF05138 Phenylacetic acid catabolic protein CLQ46_RS17305 PF06243 Phenylacetic acid degradation B CLQ46_RS17310 PF05138 Phenylacetic acid catabolic protein CLQ46_RS17315 PF00171 Aldehyde dehydrogenase family CLQ46_RS17315 PF01575 MaoC like domain CLQ46_RS17330 PF02728 Copper amine oxidase, N3 domain CLQ46_RS17330 PF01179 Copper amine oxidase, enzyme domain CLQ46_RS17330 PF07833 Copper amine oxidase N-terminal domain CLQ46_RS17330 PF02727 Copper amine oxidase, N2 domain CLQ46_RS17340 PF02558 Ketopantoate reductase PanE/ApbA CLQ46_RS17340 PF08546 Ketopantoate reductase PanE/ApbA C terminal CLQ46_RS17345 PF00171 Aldehyde dehydrogenase family CLQ46_RS17350 PF14525 AraC-binding-like domain CLQ46_RS17350 PF12833 Helix-turn-helix domain CLQ46_RS17355 PF07027 Protein of unknown function (DUF1318) CLQ46_RS17360 PF13617 YnbE-like lipoprotein CLQ46_RS17365 PF11739 Dicarboxylate transport CLQ46_RS17370 PF09335 SNARE associated Golgi protein CLQ46_RS17375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLQ46_RS17375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLQ46_RS17380 PF03724 META domain CLQ46_RS17385 PF03891 Domain of unknown function (DUF333) CLQ46_RS17395 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLQ46_RS17395 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CLQ46_RS17395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ46_RS17395 PF10371 Domain of unknown function CLQ46_RS17395 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLQ46_RS17400 PF00267 Gram-negative porin CLQ46_RS17410 PF00582 Universal stress protein family CLQ46_RS17415 PF01171 PP-loop family CLQ46_RS17420 PF03880 DbpA RNA binding domain CLQ46_RS17420 PF00270 DEAD/DEAH box helicase CLQ46_RS17420 PF00271 Helicase conserved C-terminal domain CLQ46_RS17430 PF01544 CorA-like Mg2+ transporter protein CLQ46_RS17440 PF08220 DeoR-like helix-turn-helix domain CLQ46_RS17440 PF00455 DeoR C terminal sensor domain CLQ46_RS17445 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ46_RS17445 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLQ46_RS17460 PF00324 Amino acid permease CLQ46_RS17465 PF01037 Lrp/AsnC ligand binding domain CLQ46_RS17475 PF00155 Aminotransferase class I and II CLQ46_RS17480 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS17485 PF09383 NIL domain CLQ46_RS17485 PF00005 ABC transporter CLQ46_RS17490 PF03180 NLPA lipoprotein CLQ46_RS17495 PF00155 Aminotransferase class I and II CLQ46_RS17500 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS17500 PF00107 Zinc-binding dehydrogenase CLQ46_RS17505 PF00440 Bacterial regulatory proteins, tetR family CLQ46_RS17515 PF00753 Metallo-beta-lactamase superfamily CLQ46_RS17520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS17520 PF03466 LysR substrate binding domain CLQ46_RS17525 PF03466 LysR substrate binding domain CLQ46_RS17525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS17550 PF00440 Bacterial regulatory proteins, tetR family CLQ46_RS17635 PF04717 Type VI secretion system, phage-baseplate injector CLQ46_RS17635 PF13296 Putative type VI secretion system Rhs element Vgr CLQ46_RS17635 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CLQ46_RS17640 PF00004 ATPase family associated with various cellular activities (AAA) CLQ46_RS17640 PF07724 AAA domain (Cdc48 subfamily) CLQ46_RS17640 PF10431 C-terminal, D2-small domain, of ClpB protein CLQ46_RS17640 PF17871 AAA lid domain CLQ46_RS17650 PF00691 OmpA family CLQ46_RS17650 PF13488 Glycine zipper CLQ46_RS17665 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CLQ46_RS17675 PF05598 Transposase domain (DUF772) CLQ46_RS17675 PF01609 Transposase DDE domain CLQ46_RS17685 PF00589 Phage integrase family CLQ46_RS17685 PF14659 Phage integrase, N-terminal SAM-like domain CLQ46_RS17685 PF13356 Arm DNA-binding domain CLQ46_RS17690 PF01965 DJ-1/PfpI family CLQ46_RS17695 PF01966 HD domain CLQ46_RS17705 PF03466 LysR substrate binding domain CLQ46_RS17705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS17725 PF00248 Aldo/keto reductase family CLQ46_RS17730 PF07690 Major Facilitator Superfamily CLQ46_RS17735 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CLQ46_RS17740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS17740 PF03466 LysR substrate binding domain CLQ46_RS17755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ46_RS17760 PF00246 Zinc carboxypeptidase CLQ46_RS17765 PF13378 Enolase C-terminal domain-like CLQ46_RS17765 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CLQ46_RS17770 PF08534 Redoxin CLQ46_RS17775 PF05145 Transition state regulatory protein AbrB CLQ46_RS17780 PF18024 Helix-turn-helix domain CLQ46_RS17780 PF00158 Sigma-54 interaction domain CLQ46_RS17785 PF02056 Family 4 glycosyl hydrolase CLQ46_RS17785 PF11975 Family 4 glycosyl hydrolase C-terminal domain CLQ46_RS17790 PF03466 LysR substrate binding domain CLQ46_RS17790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS17795 PF05128 Domain of unknown function (DUF697) CLQ46_RS17800 PF04317 YcjX-like family, DUF463 CLQ46_RS17805 PF09584 Phage shock protein PspD (Phageshock_PspD) CLQ46_RS17810 PF04024 PspC domain CLQ46_RS17815 PF06667 Phage shock protein B CLQ46_RS17820 PF04012 PspA/IM30 family CLQ46_RS17825 PF02954 Bacterial regulatory protein, Fis family CLQ46_RS17825 PF00158 Sigma-54 interaction domain CLQ46_RS17830 PF07690 Major Facilitator Superfamily CLQ46_RS17835 PF07687 Peptidase dimerisation domain CLQ46_RS17835 PF01546 Peptidase family M20/M25/M40 CLQ46_RS17840 PF12833 Helix-turn-helix domain CLQ46_RS17850 PF13460 NAD(P)H-binding CLQ46_RS17855 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ46_RS17860 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS17865 PF02586 SOS response associated peptidase (SRAP) CLQ46_RS17875 PF11798 IMS family HHH motif CLQ46_RS17875 PF11799 impB/mucB/samB family C-terminal domain CLQ46_RS17875 PF00817 impB/mucB/samB family CLQ46_RS17875 PF13438 Domain of unknown function (DUF4113) CLQ46_RS17880 PF00717 Peptidase S24-like CLQ46_RS17885 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLQ46_RS17910 PF13610 DDE domain CLQ46_RS17920 PF00893 Small Multidrug Resistance protein CLQ46_RS17925 PF13427 Domain of unknown function (DUF4111) CLQ46_RS17935 PF13610 DDE domain CLQ46_RS17970 PF00149 Calcineurin-like phosphoesterase CLQ46_RS18085 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS18085 PF12911 N-terminal TM domain of oligopeptide transport permease C CLQ46_RS18090 PF00005 ABC transporter CLQ46_RS18090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ46_RS18095 PF00005 ABC transporter CLQ46_RS18100 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CLQ46_RS18105 PF05962 HutD CLQ46_RS18120 PF08206 Ribonuclease B OB domain CLQ46_RS18120 PF17876 Cold shock domain CLQ46_RS18120 PF00773 RNB domain CLQ46_RS18120 PF00575 S1 RNA binding domain CLQ46_RS18130 PF00455 DeoR C terminal sensor domain CLQ46_RS18130 PF08220 DeoR-like helix-turn-helix domain CLQ46_RS18135 PF05433 Glycine zipper 2TM domain CLQ46_RS18140 PF01253 Translation initiation factor SUI1 CLQ46_RS18145 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CLQ46_RS18150 PF18073 Rubredoxin metal binding domain CLQ46_RS18155 PF06305 Lipopolysaccharide assembly protein A domain CLQ46_RS18160 PF01569 PAP2 superfamily CLQ46_RS18165 PF00925 GTP cyclohydrolase II CLQ46_RS18170 PF00330 Aconitase family (aconitate hydratase) CLQ46_RS18170 PF00694 Aconitase C-terminal domain CLQ46_RS18185 PF03466 LysR substrate binding domain CLQ46_RS18185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS18190 PF08272 Topoisomerase I zinc-ribbon-like CLQ46_RS18190 PF01751 Toprim domain CLQ46_RS18190 PF01131 DNA topoisomerase CLQ46_RS18190 PF01396 Topoisomerase DNA binding C4 zinc finger CLQ46_RS18195 PF10692 Protein of unknown function (DUF2498) CLQ46_RS18200 PF01343 Peptidase family S49 CLQ46_RS18200 PF08496 Peptidase family S49 N-terminal CLQ46_RS18210 PF00106 short chain dehydrogenase CLQ46_RS18215 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CLQ46_RS18215 PF12557 Cob(I)alamin adenosyltransferase N terminal CLQ46_RS18220 PF00849 RNA pseudouridylate synthase CLQ46_RS18220 PF01479 S4 domain CLQ46_RS18225 PF03466 LysR substrate binding domain CLQ46_RS18225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS18235 PF01300 Telomere recombination CLQ46_RS18240 PF02811 PHP domain CLQ46_RS18245 PF04715 Anthranilate synthase component I, N terminal region CLQ46_RS18245 PF00425 chorismate binding enzyme CLQ46_RS18250 PF00117 Glutamine amidotransferase class-I CLQ46_RS18250 PF00591 Glycosyl transferase family, a/b domain CLQ46_RS18250 PF02885 Glycosyl transferase family, helical bundle domain CLQ46_RS18255 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CLQ46_RS18255 PF00218 Indole-3-glycerol phosphate synthase CLQ46_RS18260 PF00291 Pyridoxal-phosphate dependent enzyme CLQ46_RS18265 PF00290 Tryptophan synthase alpha chain CLQ46_RS18270 PF05161 MOFRL family CLQ46_RS18270 PF13660 Domain of unknown function (DUF4147) CLQ46_RS18275 PF00180 Isocitrate/isopropylmalate dehydrogenase CLQ46_RS18280 PF07690 Major Facilitator Superfamily CLQ46_RS18285 PF03466 LysR substrate binding domain CLQ46_RS18285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS18305 PF00106 short chain dehydrogenase CLQ46_RS18310 PF00593 TonB dependent receptor CLQ46_RS18310 PF07715 TonB-dependent Receptor Plug Domain CLQ46_RS18315 PF18331 PKHD-type hydroxylase C-terminal domain CLQ46_RS18315 PF13640 2OG-Fe(II) oxygenase superfamily CLQ46_RS18320 PF03922 OmpW family CLQ46_RS18325 PF03692 Putative zinc- or iron-chelating domain CLQ46_RS18335 PF04279 Intracellular septation protein A CLQ46_RS18340 PF07715 TonB-dependent Receptor Plug Domain CLQ46_RS18340 PF00593 TonB dependent receptor CLQ46_RS18345 PF03061 Thioesterase superfamily CLQ46_RS18350 PF14002 YniB-like protein CLQ46_RS18355 PF13419 Haloacid dehalogenase-like hydrolase CLQ46_RS18365 PF04307 LexA-binding, inner membrane-associated putative hydrolase CLQ46_RS18370 PF00375 Sodium:dicarboxylate symporter family CLQ46_RS18375 PF10729 Cell division activator CedA CLQ46_RS18380 PF06628 Catalase-related immune-responsive CLQ46_RS18380 PF18011 C-terminal domain found in long catalases CLQ46_RS18380 PF00199 Catalase CLQ46_RS18385 PF04794 YdjC-like protein CLQ46_RS18390 PF02056 Family 4 glycosyl hydrolase CLQ46_RS18390 PF11975 Family 4 glycosyl hydrolase C-terminal domain CLQ46_RS18395 PF07883 Cupin domain CLQ46_RS18395 PF12833 Helix-turn-helix domain CLQ46_RS18400 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CLQ46_RS18405 PF02378 Phosphotransferase system, EIIC CLQ46_RS18410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ46_RS18415 PF04355 SmpA / OmlA family CLQ46_RS18420 PF02540 NAD synthase CLQ46_RS18430 PF07813 LTXXQ motif family protein CLQ46_RS18435 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CLQ46_RS18440 PF04996 Succinylarginine dihydrolase CLQ46_RS18445 PF00171 Aldehyde dehydrogenase family CLQ46_RS18450 PF04958 Arginine N-succinyltransferase beta subunit CLQ46_RS18455 PF00202 Aminotransferase class-III CLQ46_RS18460 PF03372 Endonuclease/Exonuclease/phosphatase family CLQ46_RS18465 PF09335 SNARE associated Golgi protein CLQ46_RS18470 PF09335 SNARE associated Golgi protein CLQ46_RS18475 PF02627 Carboxymuconolactone decarboxylase family CLQ46_RS18480 PF13416 Bacterial extracellular solute-binding protein CLQ46_RS18485 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS18490 PF00005 ABC transporter CLQ46_RS18495 PF00581 Rhodanese-like domain CLQ46_RS18500 PF01066 CDP-alcohol phosphatidyltransferase CLQ46_RS18505 PF00293 NUDIX domain CLQ46_RS18510 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CLQ46_RS18510 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CLQ46_RS18515 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS18515 PF00109 Beta-ketoacyl synthase, N-terminal domain CLQ46_RS18515 PF02801 Beta-ketoacyl synthase, C-terminal domain CLQ46_RS18515 PF08659 KR domain CLQ46_RS18515 PF00550 Phosphopantetheine attachment site CLQ46_RS18515 PF14765 Polyketide synthase dehydratase CLQ46_RS18515 PF16197 Ketoacyl-synthetase C-terminal extension CLQ46_RS18515 PF00698 Acyl transferase domain CLQ46_RS18520 PF01131 DNA topoisomerase CLQ46_RS18520 PF01751 Toprim domain CLQ46_RS18525 PF00586 AIR synthase related protein, N-terminal domain CLQ46_RS18525 PF02769 AIR synthase related protein, C-terminal domain CLQ46_RS18530 PF01569 PAP2 superfamily CLQ46_RS18545 PF00881 Nitroreductase family CLQ46_RS18550 PF01343 Peptidase family S49 CLQ46_RS18555 PF00710 Asparaginase, N-terminal CLQ46_RS18555 PF17763 Glutaminase/Asparaginase C-terminal domain CLQ46_RS18560 PF00857 Isochorismatase family CLQ46_RS18565 PF00083 Sugar (and other) transporter CLQ46_RS18570 PF00455 DeoR C terminal sensor domain CLQ46_RS18570 PF08220 DeoR-like helix-turn-helix domain CLQ46_RS18575 PF00248 Aldo/keto reductase family CLQ46_RS18580 PF00294 pfkB family carbohydrate kinase CLQ46_RS18585 PF01116 Fructose-bisphosphate aldolase class-II CLQ46_RS18590 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS18590 PF00107 Zinc-binding dehydrogenase CLQ46_RS18595 PF00083 Sugar (and other) transporter CLQ46_RS18600 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS18600 PF00107 Zinc-binding dehydrogenase CLQ46_RS18605 PF00704 Glycosyl hydrolases family 18 CLQ46_RS18605 PF00041 Fibronectin type III domain CLQ46_RS18610 PF01844 HNH endonuclease CLQ46_RS18615 PF07023 Protein of unknown function (DUF1315) CLQ46_RS18620 PF01641 SelR domain CLQ46_RS18625 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CLQ46_RS18625 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLQ46_RS18630 PF01263 Aldose 1-epimerase CLQ46_RS18640 PF06629 MltA-interacting protein MipA CLQ46_RS18645 PF06798 PrkA serine protein kinase C-terminal domain CLQ46_RS18645 PF08298 PrkA AAA domain CLQ46_RS18650 PF04285 Protein of unknown function (DUF444) CLQ46_RS18660 PF00255 Glutathione peroxidase CLQ46_RS18670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS18670 PF03466 LysR substrate binding domain CLQ46_RS18675 PF07690 Major Facilitator Superfamily CLQ46_RS18685 PF03466 LysR substrate binding domain CLQ46_RS18685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS18690 PF11798 IMS family HHH motif CLQ46_RS18690 PF13438 Domain of unknown function (DUF4113) CLQ46_RS18690 PF11799 impB/mucB/samB family C-terminal domain CLQ46_RS18690 PF00817 impB/mucB/samB family CLQ46_RS18695 PF00717 Peptidase S24-like CLQ46_RS18700 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLQ46_RS18710 PF06183 DinI-like family CLQ46_RS18715 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CLQ46_RS18720 PF04073 Aminoacyl-tRNA editing domain CLQ46_RS18725 PF04284 Protein of unknown function (DUF441) CLQ46_RS18730 PF02311 AraC-like ligand binding domain CLQ46_RS18730 PF12833 Helix-turn-helix domain CLQ46_RS18735 PF07690 Major Facilitator Superfamily CLQ46_RS18740 PF06418 CTP synthase N-terminus CLQ46_RS18740 PF00117 Glutamine amidotransferase class-I CLQ46_RS18745 PF04463 Protein of unknown function (DUF523) CLQ46_RS18750 PF04343 Protein of unknown function, DUF488 CLQ46_RS18755 PF03891 Domain of unknown function (DUF333) CLQ46_RS18760 PF00990 Diguanylate cyclase, GGDEF domain CLQ46_RS18760 PF13185 GAF domain CLQ46_RS18780 PF10749 Protein of unknown function (DUF2534) CLQ46_RS18785 PF01810 LysE type translocator CLQ46_RS18790 PF03279 Bacterial lipid A biosynthesis acyltransferase CLQ46_RS18800 PF17763 Glutaminase/Asparaginase C-terminal domain CLQ46_RS18800 PF00710 Asparaginase, N-terminal CLQ46_RS18805 PF01966 HD domain CLQ46_RS18810 PF00990 Diguanylate cyclase, GGDEF domain CLQ46_RS18815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS18815 PF03466 LysR substrate binding domain CLQ46_RS18820 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CLQ46_RS18845 PF02322 Cytochrome bd terminal oxidase subunit II CLQ46_RS18850 PF01654 Cytochrome bd terminal oxidase subunit I CLQ46_RS18855 PF05067 Manganese containing catalase CLQ46_RS18860 PF05974 Domain of unknown function (DUF892) CLQ46_RS18865 PF05974 Domain of unknown function (DUF892) CLQ46_RS18870 PF10685 Stress-induced bacterial acidophilic repeat motif CLQ46_RS18875 PF00107 Zinc-binding dehydrogenase CLQ46_RS18875 PF13823 Alcohol dehydrogenase GroES-associated CLQ46_RS18875 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS18880 PF06906 Protein of unknown function (DUF1272) CLQ46_RS18900 PF00180 Isocitrate/isopropylmalate dehydrogenase CLQ46_RS18990 PF01343 Peptidase family S49 CLQ46_RS19005 PF03354 Phage Terminase CLQ46_RS19045 PF00959 Phage lysozyme CLQ46_RS19050 PF04971 Bacteriophage P21 holin S CLQ46_RS19055 PF05598 Transposase domain (DUF772) CLQ46_RS19055 PF01609 Transposase DDE domain CLQ46_RS19070 PF06147 Protein of unknown function (DUF968) CLQ46_RS19080 PF01726 LexA DNA binding domain CLQ46_RS19080 PF00717 Peptidase S24-like CLQ46_RS19090 PF06183 DinI-like family CLQ46_RS19095 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLQ46_RS19105 PF13286 Phosphohydrolase-associated domain CLQ46_RS19105 PF01966 HD domain CLQ46_RS19135 PF17948 DnaT DNA-binding domain CLQ46_RS19150 PF01381 Helix-turn-helix CLQ46_RS19175 PF12684 PDDEXK-like domain of unknown function (DUF3799) CLQ46_RS19175 PF06630 Enterobacterial exodeoxyribonuclease VIII CLQ46_RS19180 PF07825 Excisionase-like protein CLQ46_RS19185 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain CLQ46_RS19185 PF00589 Phage integrase family CLQ46_RS19190 PF00180 Isocitrate/isopropylmalate dehydrogenase CLQ46_RS19195 PF00849 RNA pseudouridylate synthase CLQ46_RS19200 PF00293 NUDIX domain CLQ46_RS19210 PF04356 Protein of unknown function (DUF489) CLQ46_RS19215 PF08328 Adenylosuccinate lyase C-terminal CLQ46_RS19215 PF00206 Lyase CLQ46_RS19230 PF00072 Response regulator receiver domain CLQ46_RS19230 PF00486 Transcriptional regulatory protein, C terminal CLQ46_RS19235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS19235 PF08918 PhoQ Sensor CLQ46_RS19240 PF08007 Cupin superfamily protein CLQ46_RS19245 PF07687 Peptidase dimerisation domain CLQ46_RS19245 PF01546 Peptidase family M20/M25/M40 CLQ46_RS19250 PF08402 TOBE domain CLQ46_RS19250 PF00005 ABC transporter CLQ46_RS19255 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS19260 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS19265 PF13416 Bacterial extracellular solute-binding protein CLQ46_RS19275 PF13193 AMP-binding enzyme C-terminal domain CLQ46_RS19275 PF00501 AMP-binding enzyme CLQ46_RS19285 PF02146 Sir2 family CLQ46_RS19290 PF00480 ROK family CLQ46_RS19295 PF02687 FtsX-like permease family CLQ46_RS19295 PF12704 MacB-like periplasmic core domain CLQ46_RS19300 PF00005 ABC transporter CLQ46_RS19305 PF12704 MacB-like periplasmic core domain CLQ46_RS19305 PF02687 FtsX-like permease family CLQ46_RS19315 PF17757 UvrB interaction domain CLQ46_RS19315 PF03461 TRCF domain CLQ46_RS19315 PF00271 Helicase conserved C-terminal domain CLQ46_RS19315 PF00270 DEAD/DEAH box helicase CLQ46_RS19315 PF02559 CarD-like/TRCF domain CLQ46_RS19320 PF01476 LysM domain CLQ46_RS19320 PF03734 L,D-transpeptidase catalytic domain CLQ46_RS19320 PF17969 L,D-transpeptidase C-terminal domain CLQ46_RS19325 PF07338 Protein of unknown function (DUF1471) CLQ46_RS19330 PF00440 Bacterial regulatory proteins, tetR family CLQ46_RS19335 PF07715 TonB-dependent Receptor Plug Domain CLQ46_RS19335 PF00593 TonB dependent receptor CLQ46_RS19340 PF05433 Glycine zipper 2TM domain CLQ46_RS19345 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ46_RS19350 PF05728 Uncharacterised protein family (UPF0227) CLQ46_RS19355 PF00933 Glycosyl hydrolase family 3 N terminal domain CLQ46_RS19360 PF01636 Phosphotransferase enzyme family CLQ46_RS19365 PF13036 Peptidoglycan-synthase activator LpoB CLQ46_RS19370 PF07233 Protein of unknown function (DUF1425) CLQ46_RS19375 PF01230 HIT domain CLQ46_RS19380 PF02378 Phosphotransferase system, EIIC CLQ46_RS19380 PF00367 phosphotransferase system, EIIB CLQ46_RS19385 PF01026 TatD related DNase CLQ46_RS19390 PF09115 DNA polymerase III, delta subunit, C terminal CLQ46_RS19395 PF02223 Thymidylate kinase CLQ46_RS19400 PF02618 YceG-like family CLQ46_RS19405 PF01063 Amino-transferase class IV CLQ46_RS19410 PF00109 Beta-ketoacyl synthase, N-terminal domain CLQ46_RS19410 PF02801 Beta-ketoacyl synthase, C-terminal domain CLQ46_RS19415 PF00550 Phosphopantetheine attachment site CLQ46_RS19425 PF00698 Acyl transferase domain CLQ46_RS19430 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CLQ46_RS19430 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLQ46_RS19435 PF02504 Fatty acid synthesis protein CLQ46_RS19440 PF01783 Ribosomal L32p protein family CLQ46_RS19445 PF02620 Large ribosomal RNA subunit accumulation protein YceD CLQ46_RS19450 PF02545 Maf-like protein CLQ46_RS19455 PF00849 RNA pseudouridylate synthase CLQ46_RS19455 PF01479 S4 domain CLQ46_RS19465 PF12111 Polyribonucleotide phosphorylase C terminal CLQ46_RS19465 PF00575 S1 RNA binding domain CLQ46_RS19465 PF10150 Ribonuclease E/G family CLQ46_RS19470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS19470 PF03466 LysR substrate binding domain CLQ46_RS19475 PF07690 Major Facilitator Superfamily CLQ46_RS19480 PF03023 Lipid II flippase MurJ CLQ46_RS19485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ46_RS19490 PF04337 Protein of unknown function, DUF480 CLQ46_RS19495 PF13302 Acetyltransferase (GNAT) domain CLQ46_RS19500 PF07690 Major Facilitator Superfamily CLQ46_RS19505 PF07273 Protein of unknown function (DUF1439) CLQ46_RS19510 PF01979 Amidohydrolase family CLQ46_RS19515 PF06183 DinI-like family CLQ46_RS19525 PF13991 BssS protein family CLQ46_RS19530 PF01266 FAD dependent oxidoreductase CLQ46_RS19535 PF10968 Protein of unknown function (DUF2770) CLQ46_RS19540 PF17773 UPF0176 acylphosphatase like domain CLQ46_RS19540 PF12368 Rhodanase C-terminal CLQ46_RS19540 PF00581 Rhodanese-like domain CLQ46_RS19545 PF03279 Bacterial lipid A biosynthesis acyltransferase CLQ46_RS19555 PF07690 Major Facilitator Superfamily CLQ46_RS19560 PF13984 MsyB protein CLQ46_RS19565 PF07119 Protein of unknown function (DUF1375) CLQ46_RS19570 PF00535 Glycosyl transferase family 2 CLQ46_RS19575 PF04349 Periplasmic glucan biosynthesis protein, MdoG CLQ46_RS19585 PF01757 Acyltransferase family CLQ46_RS19590 PF00440 Bacterial regulatory proteins, tetR family CLQ46_RS19590 PF13977 BetI-type transcriptional repressor, C-terminal CLQ46_RS19595 PF01661 Macro domain CLQ46_RS19600 PF06496 Protein of unknown function (DUF1097) CLQ46_RS19605 PF02613 Nitrate reductase delta subunit CLQ46_RS19610 PF02811 PHP domain CLQ46_RS19615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLQ46_RS19630 PF03466 LysR substrate binding domain CLQ46_RS19630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS19635 PF02678 Pirin CLQ46_RS19635 PF05726 Pirin C-terminal cupin domain CLQ46_RS19640 PF00857 Isochorismatase family CLQ46_RS19650 PF01323 DSBA-like thioredoxin domain CLQ46_RS19655 PF02562 PhoH-like protein CLQ46_RS19660 PF04261 Dyp-type peroxidase family CLQ46_RS19665 PF09375 Imelysin CLQ46_RS19665 PF13473 Cupredoxin-like domain CLQ46_RS19670 PF03239 Iron permease FTR1 family CLQ46_RS19675 PF07670 Nucleoside recognition CLQ46_RS19675 PF01773 Na+ dependent nucleoside transporter N-terminus CLQ46_RS19675 PF07662 Na+ dependent nucleoside transporter C-terminus CLQ46_RS19685 PF00474 Sodium:solute symporter family CLQ46_RS19695 PF00171 Aldehyde dehydrogenase family CLQ46_RS19695 PF14850 DNA-binding domain of Proline dehydrogenase CLQ46_RS19695 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CLQ46_RS19695 PF01619 Proline dehydrogenase CLQ46_RS19705 PF00440 Bacterial regulatory proteins, tetR family CLQ46_RS19705 PF08362 YcdC-like protein, C-terminal region CLQ46_RS19710 PF00296 Luciferase-like monooxygenase CLQ46_RS19715 PF00857 Isochorismatase family CLQ46_RS19720 PF01042 Endoribonuclease L-PSP CLQ46_RS19725 PF00561 alpha/beta hydrolase fold CLQ46_RS19730 PF00881 Nitroreductase family CLQ46_RS19735 PF01613 Flavin reductase like domain CLQ46_RS19740 PF00860 Permease family CLQ46_RS19750 PF10685 Stress-induced bacterial acidophilic repeat motif CLQ46_RS19755 PF03358 NADPH-dependent FMN reductase CLQ46_RS19760 PF13993 YccJ-like protein CLQ46_RS19765 PF00328 Histidine phosphatase superfamily (branch 2) CLQ46_RS19770 PF01638 HxlR-like helix-turn-helix CLQ46_RS19790 PF00324 Amino acid permease CLQ46_RS19800 PF00120 Glutamine synthetase, catalytic domain CLQ46_RS19805 PF07722 Peptidase C26 CLQ46_RS19810 PF01381 Helix-turn-helix CLQ46_RS19810 PF07883 Cupin domain CLQ46_RS19815 PF00171 Aldehyde dehydrogenase family CLQ46_RS19820 PF01266 FAD dependent oxidoreductase CLQ46_RS19825 PF03466 LysR substrate binding domain CLQ46_RS19825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS19830 PF00180 Isocitrate/isopropylmalate dehydrogenase CLQ46_RS19840 PF02028 BCCT, betaine/carnitine/choline family transporter CLQ46_RS19845 PF00355 Rieske [2Fe-2S] domain CLQ46_RS19845 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CLQ46_RS19850 PF00171 Aldehyde dehydrogenase family CLQ46_RS19855 PF00175 Oxidoreductase NAD-binding domain CLQ46_RS19855 PF00111 2Fe-2S iron-sulfur cluster binding domain CLQ46_RS19855 PF00970 Oxidoreductase FAD-binding domain CLQ46_RS19865 PF00563 EAL domain CLQ46_RS19865 PF12792 CSS motif domain associated with EAL CLQ46_RS19870 PF00563 EAL domain CLQ46_RS19870 PF12792 CSS motif domain associated with EAL CLQ46_RS19880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ46_RS19885 PF01027 Inhibitor of apoptosis-promoting Bax1 CLQ46_RS19890 PF04358 DsrC like protein CLQ46_RS19895 PF00708 Acylphosphatase CLQ46_RS19900 PF12833 Helix-turn-helix domain CLQ46_RS19905 PF01161 Phosphatidylethanolamine-binding protein CLQ46_RS19910 PF10672 S-adenosylmethionine-dependent methyltransferase CLQ46_RS19910 PF17785 PUA-like domain CLQ46_RS19915 PF08755 Hemimethylated DNA-binding protein YccV like CLQ46_RS19920 PF13380 CoA binding domain CLQ46_RS19925 PF02142 MGS-like domain CLQ46_RS19930 PF12462 DNA helicase IV / RNA helicase N terminal CLQ46_RS19930 PF00580 UvrD/REP helicase N-terminal domain CLQ46_RS19930 PF13361 UvrD-like helicase C-terminal domain CLQ46_RS19935 PF03733 Inner membrane component domain CLQ46_RS19940 PF12805 FUSC-like inner membrane protein yccS CLQ46_RS19945 PF04994 TfoX C-terminal domain CLQ46_RS19945 PF04993 TfoX N-terminal domain CLQ46_RS19955 PF03846 Cell division inhibitor SulA CLQ46_RS19960 PF01389 OmpA-like transmembrane domain CLQ46_RS19960 PF00691 OmpA family CLQ46_RS19965 PF06303 MatP N-terminal domain CLQ46_RS19965 PF17414 MatP C-terminal ribbon-helix-helix domain CLQ46_RS19970 PF05362 Lon protease (S16) C-terminal proteolytic domain CLQ46_RS19970 PF13654 AAA domain CLQ46_RS19975 PF07977 FabA-like domain CLQ46_RS19980 PF04957 Ribosome modulation factor CLQ46_RS19990 PF03886 ABC-type transport auxiliary lipoprotein component CLQ46_RS19995 PF02470 MlaD protein CLQ46_RS20000 PF04403 Paraquat-inducible protein A CLQ46_RS20005 PF12848 ABC transporter CLQ46_RS20005 PF00005 ABC transporter CLQ46_RS20005 PF16326 ABC transporter C-terminal domain CLQ46_RS20010 PF02926 THUMP domain CLQ46_RS20010 PF10672 S-adenosylmethionine-dependent methyltransferase CLQ46_RS20010 PF01170 Putative RNA methylase family UPF0020 CLQ46_RS20015 PF00111 2Fe-2S iron-sulfur cluster binding domain CLQ46_RS20015 PF03473 MOSC domain CLQ46_RS20015 PF03476 MOSC N-terminal beta barrel domain CLQ46_RS20020 PF07126 Cell-division protein ZapC CLQ46_RS20025 PF01180 Dihydroorotate dehydrogenase CLQ46_RS20030 PF03358 NADPH-dependent FMN reductase CLQ46_RS20035 PF09084 NMT1/THI5 like CLQ46_RS20040 PF00296 Luciferase-like monooxygenase CLQ46_RS20045 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS20050 PF00005 ABC transporter CLQ46_RS20055 PF11940 Domain of unknown function (DUF3458) Ig-like fold CLQ46_RS20055 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CLQ46_RS20055 PF01433 Peptidase family M1 domain CLQ46_RS20065 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CLQ46_RS20065 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CLQ46_RS20070 PF01546 Peptidase family M20/M25/M40 CLQ46_RS20070 PF07687 Peptidase dimerisation domain CLQ46_RS20075 PF07687 Peptidase dimerisation domain CLQ46_RS20075 PF01546 Peptidase family M20/M25/M40 CLQ46_RS20085 PF00291 Pyridoxal-phosphate dependent enzyme CLQ46_RS20090 PF01037 Lrp/AsnC ligand binding domain CLQ46_RS20095 PF00152 tRNA synthetases class II (D, K and N) CLQ46_RS20095 PF01336 OB-fold nucleic acid binding domain CLQ46_RS20105 PF00155 Aminotransferase class I and II CLQ46_RS20110 PF00753 Metallo-beta-lactamase superfamily CLQ46_RS20115 PF05951 Bacterial protein of unknown function (DUF882) CLQ46_RS20125 PF03734 L,D-transpeptidase catalytic domain CLQ46_RS20125 PF01471 Putative peptidoglycan binding domain CLQ46_RS20130 PF04310 MukB N-terminal CLQ46_RS20130 PF16330 MukB hinge domain CLQ46_RS20135 PF04288 MukE-like family CLQ46_RS20140 PF17193 MukF C-terminal domain CLQ46_RS20140 PF03882 MukF winged-helix domain CLQ46_RS20140 PF17192 MukF middle domain CLQ46_RS20145 PF13847 Methyltransferase domain CLQ46_RS20150 PF02698 DUF218 domain CLQ46_RS20155 PF01636 Phosphotransferase enzyme family CLQ46_RS20160 PF02348 Cytidylyltransferase CLQ46_RS20165 PF03966 Trm112p-like protein CLQ46_RS20170 PF06224 Winged helix DNA-binding domain CLQ46_RS20175 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CLQ46_RS20180 PF00664 ABC transporter transmembrane region CLQ46_RS20180 PF00005 ABC transporter CLQ46_RS20185 PF03772 Competence protein CLQ46_RS20185 PF00753 Metallo-beta-lactamase superfamily CLQ46_RS20190 PF00216 Bacterial DNA-binding protein CLQ46_RS20195 PF00575 S1 RNA binding domain CLQ46_RS20200 PF02224 Cytidylate kinase CLQ46_RS20205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLQ46_RS20210 PF00266 Aminotransferase class-V CLQ46_RS20215 PF04239 Protein of unknown function (DUF421) CLQ46_RS20220 PF18381 YcaO cyclodehydratase C-terminal domain CLQ46_RS20220 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CLQ46_RS20225 PF01226 Formate/nitrite transporter CLQ46_RS20230 PF02901 Pyruvate formate lyase-like CLQ46_RS20230 PF01228 Glycine radical CLQ46_RS20235 PF04055 Radical SAM superfamily CLQ46_RS20240 PF07690 Major Facilitator Superfamily CLQ46_RS20250 PF04976 DMSO reductase anchor subunit (DmsC) CLQ46_RS20255 PF13247 4Fe-4S dicluster domain CLQ46_RS20255 PF12800 4Fe-4S binding domain CLQ46_RS20260 PF01568 Molydopterin dinucleotide binding domain CLQ46_RS20260 PF00384 Molybdopterin oxidoreductase CLQ46_RS20260 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLQ46_RS20265 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLQ46_RS20265 PF02403 Seryl-tRNA synthetase N-terminal domain CLQ46_RS20270 PF12002 MgsA AAA+ ATPase C terminal CLQ46_RS20270 PF16193 AAA C-terminal domain CLQ46_RS20270 PF00004 ATPase family associated with various cellular activities (AAA) CLQ46_RS20275 PF03548 Outer membrane lipoprotein carrier protein LolA CLQ46_RS20280 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CLQ46_RS20280 PF17854 FtsK alpha domain CLQ46_RS20280 PF09397 Ftsk gamma domain CLQ46_RS20280 PF01580 FtsK/SpoIIIE family CLQ46_RS20285 PF01037 Lrp/AsnC ligand binding domain CLQ46_RS20290 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ46_RS20295 PF00664 ABC transporter transmembrane region CLQ46_RS20295 PF00005 ABC transporter CLQ46_RS20300 PF00005 ABC transporter CLQ46_RS20300 PF00664 ABC transporter transmembrane region CLQ46_RS20305 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CLQ46_RS20310 PF01176 Translation initiation factor 1A / IF-1 CLQ46_RS20315 PF07724 AAA domain (Cdc48 subfamily) CLQ46_RS20315 PF10431 C-terminal, D2-small domain, of ClpB protein CLQ46_RS20315 PF17871 AAA lid domain CLQ46_RS20315 PF02861 Clp amino terminal domain, pathogenicity island component CLQ46_RS20315 PF00004 ATPase family associated with various cellular activities (AAA) CLQ46_RS20320 PF02617 ATP-dependent Clp protease adaptor protein ClpS CLQ46_RS20325 PF00313 'Cold-shock' DNA-binding domain CLQ46_RS20335 PF00005 ABC transporter CLQ46_RS20335 PF12704 MacB-like periplasmic core domain CLQ46_RS20335 PF02687 FtsX-like permease family CLQ46_RS20340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ46_RS20345 PF11398 Protein of unknown function (DUF2813) CLQ46_RS20350 PF00230 Major intrinsic protein CLQ46_RS20355 PF03956 Lysine exporter LysO CLQ46_RS20360 PF03063 Prismane/CO dehydrogenase family CLQ46_RS20365 PF00111 2Fe-2S iron-sulfur cluster binding domain CLQ46_RS20365 PF00970 Oxidoreductase FAD-binding domain CLQ46_RS20365 PF00175 Oxidoreductase NAD-binding domain CLQ46_RS20380 PF00205 Thiamine pyrophosphate enzyme, central domain CLQ46_RS20380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLQ46_RS20380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ46_RS20385 PF01212 Beta-eliminating lyase CLQ46_RS20390 PF13460 NAD(P)H-binding CLQ46_RS20390 PF11066 Protein of unknown function (DUF2867) CLQ46_RS20395 PF01370 NAD dependent epimerase/dehydratase family CLQ46_RS20400 PF01510 N-acetylmuramoyl-L-alanine amidase CLQ46_RS20405 PF01590 GAF domain CLQ46_RS20405 PF00360 Phytochrome region CLQ46_RS20405 PF00990 Diguanylate cyclase, GGDEF domain CLQ46_RS20405 PF00563 EAL domain CLQ46_RS20415 PF12883 Protein of unknown function (DUF3828) CLQ46_RS20420 PF00005 ABC transporter CLQ46_RS20425 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ46_RS20430 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS20435 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS20440 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ46_RS20445 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS20445 PF16736 Single Cache-like CLQ46_RS20445 PF00989 PAS fold CLQ46_RS20445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS20450 PF00486 Transcriptional regulatory protein, C terminal CLQ46_RS20450 PF00072 Response regulator receiver domain CLQ46_RS20455 PF05958 tRNA (Uracil-5-)-methyltransferase CLQ46_RS20460 PF10767 Protein of unknown function (DUF2593) CLQ46_RS20465 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS20470 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS20475 PF00005 ABC transporter CLQ46_RS20475 PF08402 TOBE domain CLQ46_RS20480 PF13416 Bacterial extracellular solute-binding protein CLQ46_RS20485 PF10722 Putative bacterial sensory transduction regulator CLQ46_RS20490 PF08443 RimK-like ATP-grasp domain CLQ46_RS20490 PF18030 RimK PreATP-grasp domain CLQ46_RS20500 PF07214 Protein of unknown function (DUF1418) CLQ46_RS20505 PF00462 Glutaredoxin CLQ46_RS20510 PF11045 Putative inner membrane protein of Enterobacteriaceae CLQ46_RS20515 PF02080 TrkA-C domain CLQ46_RS20515 PF06826 Predicted Permease Membrane Region CLQ46_RS20520 PF04606 Ogr/Delta-like zinc finger CLQ46_RS20555 PF17482 Phage tail sheath C-terminal domain CLQ46_RS20555 PF04984 Phage tail sheath protein subtilisin-like domain CLQ46_RS20680 PF06183 DinI-like family CLQ46_RS20690 PF05840 Bacteriophage replication gene A protein (GPA) CLQ46_RS20695 PF02086 D12 class N6 adenine-specific DNA methyltransferase CLQ46_RS20700 PF01258 Prokaryotic dksA/traR C4-type zinc finger CLQ46_RS20710 PF17282 Family of unknown function (DUF5347) CLQ46_RS20720 PF06892 Phage regulatory protein CII (CP76) CLQ46_RS20730 PF16452 Bacteriophage CI repressor C-terminal domain CLQ46_RS20730 PF07022 Bacteriophage CI repressor helix-turn-helix domain CLQ46_RS20740 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLQ46_RS20750 PF02899 Phage integrase, N-terminal SAM-like domain CLQ46_RS20750 PF00589 Phage integrase family CLQ46_RS20755 PF00440 Bacterial regulatory proteins, tetR family CLQ46_RS20760 PF07690 Major Facilitator Superfamily CLQ46_RS20770 PF07690 Major Facilitator Superfamily CLQ46_RS20780 PF01569 PAP2 superfamily CLQ46_RS20785 PF08220 DeoR-like helix-turn-helix domain CLQ46_RS20785 PF00455 DeoR C terminal sensor domain CLQ46_RS20790 PF00768 D-alanyl-D-alanine carboxypeptidase CLQ46_RS20790 PF07943 Penicillin-binding protein 5, C-terminal domain CLQ46_RS20795 PF00043 Glutathione S-transferase, C-terminal domain CLQ46_RS20795 PF13417 Glutathione S-transferase, N-terminal domain CLQ46_RS20800 PF07995 Glucose / Sorbosone dehydrogenase CLQ46_RS20805 PF10799 Biofilm formation protein (YliH/bssR) CLQ46_RS20810 PF01306 LacY proton/sugar symporter CLQ46_RS20815 PF00919 Uncharacterized protein family UPF0004 CLQ46_RS20815 PF04055 Radical SAM superfamily CLQ46_RS20815 PF18693 TRAM domain CLQ46_RS20825 PF12911 N-terminal TM domain of oligopeptide transport permease C CLQ46_RS20825 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS20830 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS20835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ46_RS20840 PF00005 ABC transporter CLQ46_RS20840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ46_RS20845 PF01112 Asparaginase CLQ46_RS20850 PF03454 MoeA C-terminal region (domain IV) CLQ46_RS20850 PF00994 Probable molybdopterin binding domain CLQ46_RS20850 PF03453 MoeA N-terminal region (domain I and II) CLQ46_RS20855 PF00899 ThiF family CLQ46_RS20860 PF04055 Radical SAM superfamily CLQ46_RS20865 PF02901 Pyruvate formate lyase-like CLQ46_RS20865 PF01228 Glycine radical CLQ46_RS20875 PF07350 Protein of unknown function (DUF1479) CLQ46_RS20880 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS20885 PF07690 Major Facilitator Superfamily CLQ46_RS20890 PF17137 Domain of unknown function (DUF5110) CLQ46_RS20890 PF13802 Galactose mutarotase-like CLQ46_RS20890 PF01055 Glycosyl hydrolases family 31 CLQ46_RS20890 PF16338 Domain of unknown function (DUF4968) CLQ46_RS20900 PF00005 ABC transporter CLQ46_RS20900 PF12848 ABC transporter CLQ46_RS20905 PF13350 Tyrosine phosphatase family CLQ46_RS20910 PF17969 L,D-transpeptidase C-terminal domain CLQ46_RS20910 PF03734 L,D-transpeptidase catalytic domain CLQ46_RS20915 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS20915 PF07702 UTRA domain CLQ46_RS20920 PF00232 Glycosyl hydrolase family 1 CLQ46_RS20925 PF03600 Citrate transporter CLQ46_RS20930 PF01325 Iron dependent repressor, N-terminal DNA binding domain CLQ46_RS20930 PF02742 Iron dependent repressor, metal binding and dimerisation domain CLQ46_RS20940 PF00884 Sulfatase CLQ46_RS20945 PF13505 Outer membrane protein beta-barrel domain CLQ46_RS20950 PF00892 EamA-like transporter family CLQ46_RS20955 PF00210 Ferritin-like domain CLQ46_RS20960 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ46_RS20965 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS20970 PF00005 ABC transporter CLQ46_RS20975 PF00924 Mechanosensitive ion channel CLQ46_RS20980 PF05971 RNA methyltransferase CLQ46_RS20985 PF01613 Flavin reductase like domain CLQ46_RS20995 PF01258 Prokaryotic dksA/traR C4-type zinc finger CLQ46_RS21000 PF07338 Protein of unknown function (DUF1471) CLQ46_RS21005 PF02885 Glycosyl transferase family, helical bundle domain CLQ46_RS21010 PF00270 DEAD/DEAH box helicase CLQ46_RS21010 PF06733 DEAD_2 CLQ46_RS21010 PF13307 Helicase C-terminal domain CLQ46_RS21015 PF00270 DEAD/DEAH box helicase CLQ46_RS21015 PF00271 Helicase conserved C-terminal domain CLQ46_RS21020 PF02780 Transketolase, C-terminal domain CLQ46_RS21020 PF02779 Transketolase, pyrimidine binding domain CLQ46_RS21025 PF00456 Transketolase, thiamine diphosphate binding domain CLQ46_RS21035 PF07690 Major Facilitator Superfamily CLQ46_RS21040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS21040 PF03466 LysR substrate binding domain CLQ46_RS21045 PF09209 Tetracyclin repressor-like, C-terminal domain CLQ46_RS21045 PF00440 Bacterial regulatory proteins, tetR family CLQ46_RS21050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ46_RS21055 PF00005 ABC transporter CLQ46_RS21075 PF11076 Putative inner membrane protein YbhQ CLQ46_RS21080 PF03372 Endonuclease/Exonuclease/phosphatase family CLQ46_RS21085 PF13091 PLD-like domain CLQ46_RS21090 PF03706 Lysylphosphatidylglycerol synthase TM region CLQ46_RS21105 PF01027 Inhibitor of apoptosis-promoting Bax1 CLQ46_RS21110 PF02391 MoaE protein CLQ46_RS21115 PF02597 ThiS family CLQ46_RS21120 PF01967 MoaC family CLQ46_RS21125 PF00994 Probable molybdopterin binding domain CLQ46_RS21130 PF04055 Radical SAM superfamily CLQ46_RS21130 PF06463 Molybdenum Cofactor Synthesis C CLQ46_RS21140 PF01933 Uncharacterised protein family UPF0052 CLQ46_RS21145 PF08019 Phosphoethanolamine transferase EptA/EptB CLQ46_RS21145 PF00884 Sulfatase CLQ46_RS21150 PF00072 Response regulator receiver domain CLQ46_RS21150 PF00486 Transcriptional regulatory protein, C terminal CLQ46_RS21155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS21155 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS21165 PF12344 Ultra-violet resistance protein B CLQ46_RS21165 PF00271 Helicase conserved C-terminal domain CLQ46_RS21165 PF04851 Type III restriction enzyme, res subunit CLQ46_RS21165 PF02151 UvrB/uvrC motif CLQ46_RS21165 PF17757 UvrB interaction domain CLQ46_RS21180 PF00005 ABC transporter CLQ46_RS21190 PF08241 Methyltransferase domain CLQ46_RS21195 PF00155 Aminotransferase class I and II CLQ46_RS21200 PF06968 Biotin and Thiamin Synthesis associated domain CLQ46_RS21200 PF04055 Radical SAM superfamily CLQ46_RS21210 PF00202 Aminotransferase class-III CLQ46_RS21215 PF01161 Phosphatidylethanolamine-binding protein CLQ46_RS21225 PF00324 Amino acid permease CLQ46_RS21230 PF00221 Aromatic amino acid lyase CLQ46_RS21235 PF17391 Urocanase N-terminal domain CLQ46_RS21235 PF01175 Urocanase Rossmann-like domain CLQ46_RS21235 PF17392 Urocanase C-terminal domain CLQ46_RS21240 PF07702 UTRA domain CLQ46_RS21240 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS21245 PF00491 Arginase family CLQ46_RS21250 PF01979 Amidohydrolase family CLQ46_RS21255 PF01095 Pectinesterase CLQ46_RS21285 PF13411 MerR HTH family regulatory protein CLQ46_RS21290 PF04940 Sensors of blue-light using FAD CLQ46_RS21290 PF00563 EAL domain CLQ46_RS21295 PF10798 Biofilm development protein YmgB/AriR CLQ46_RS21305 PF10798 Biofilm development protein YmgB/AriR CLQ46_RS21310 PF10282 Lactonase, 7-bladed beta-propeller CLQ46_RS21320 PF00005 ABC transporter CLQ46_RS21320 PF03459 TOBE domain CLQ46_RS21325 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS21335 PF10766 Multidrug efflux pump-associated protein AcrZ CLQ46_RS21340 PF03459 TOBE domain CLQ46_RS21340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS21345 PF00005 ABC transporter CLQ46_RS21350 PF16363 GDP-mannose 4,6 dehydratase CLQ46_RS21355 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CLQ46_RS21355 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CLQ46_RS21360 PF08544 GHMP kinases C terminal CLQ46_RS21360 PF10509 Galactokinase galactose-binding signature CLQ46_RS21360 PF00288 GHMP kinases N terminal domain CLQ46_RS21365 PF01263 Aldose 1-epimerase CLQ46_RS21370 PF00300 Histidine phosphatase superfamily (branch 1) CLQ46_RS21375 PF00793 DAHP synthetase I family CLQ46_RS21380 PF13985 YbgS-like protein CLQ46_RS21385 PF01545 Cation efflux family CLQ46_RS21390 PF04973 Nicotinamide mononucleotide transporter CLQ46_RS21395 PF02445 Quinolinate synthetase A protein CLQ46_RS21435 PF13174 Tetratricopeptide repeat CLQ46_RS21435 PF16331 TolA binding protein trimerisation CLQ46_RS21440 PF00691 OmpA family CLQ46_RS21445 PF07676 WD40-like Beta Propeller Repeat CLQ46_RS21445 PF04052 TolB amino-terminal domain CLQ46_RS21450 PF06519 TolA C-terminal CLQ46_RS21455 PF02472 Biopolymer transport protein ExbD/TolR CLQ46_RS21460 PF01618 MotA/TolQ/ExbB proton channel family CLQ46_RS21465 PF03061 Thioesterase superfamily CLQ46_RS21470 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CLQ46_RS21475 PF08173 Membrane bound YbgT-like protein CLQ46_RS21480 PF02322 Cytochrome bd terminal oxidase subunit II CLQ46_RS21485 PF01654 Cytochrome bd terminal oxidase subunit I CLQ46_RS21495 PF00549 CoA-ligase CLQ46_RS21495 PF02629 CoA binding domain CLQ46_RS21500 PF08442 ATP-grasp domain CLQ46_RS21500 PF00549 CoA-ligase CLQ46_RS21505 PF02817 e3 binding domain CLQ46_RS21505 PF00364 Biotin-requiring enzyme CLQ46_RS21505 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CLQ46_RS21510 PF00676 Dehydrogenase E1 component CLQ46_RS21510 PF16870 2-oxoglutarate dehydrogenase C-terminal CLQ46_RS21510 PF16078 2-oxoglutarate dehydrogenase N-terminus CLQ46_RS21510 PF02779 Transketolase, pyrimidine binding domain CLQ46_RS21515 PF13085 2Fe-2S iron-sulfur cluster binding domain CLQ46_RS21520 PF02910 Fumarate reductase flavoprotein C-term CLQ46_RS21520 PF00890 FAD binding domain CLQ46_RS21525 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CLQ46_RS21530 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CLQ46_RS21545 PF00285 Citrate synthase, C-terminal domain CLQ46_RS21550 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CLQ46_RS21550 PF06827 Zinc finger found in FPG and IleRS CLQ46_RS21550 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CLQ46_RS21555 PF01470 Pyroglutamyl peptidase CLQ46_RS21570 PF03746 LamB/YcsF family CLQ46_RS21575 PF02626 Carboxyltransferase domain, subdomain A and B CLQ46_RS21580 PF02682 Carboxyltransferase domain, subdomain C and D CLQ46_RS21585 PF01784 NIF3 (NGG1p interacting factor 3) CLQ46_RS21590 PF00854 POT family CLQ46_RS21595 PF00875 DNA photolyase CLQ46_RS21595 PF03441 FAD binding domain of DNA photolyase CLQ46_RS21600 PF10725 Protein of unknown function (DUF2517) CLQ46_RS21605 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) CLQ46_RS21610 PF03814 Potassium-transporting ATPase A subunit CLQ46_RS21620 PF02669 K+-transporting ATPase, c chain CLQ46_RS21625 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS21625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS21625 PF02702 Osmosensitive K+ channel His kinase sensor domain CLQ46_RS21625 PF13492 GAF domain CLQ46_RS21625 PF13493 Domain of unknown function (DUF4118) CLQ46_RS21630 PF00486 Transcriptional regulatory protein, C terminal CLQ46_RS21630 PF00072 Response regulator receiver domain CLQ46_RS21640 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CLQ46_RS21640 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CLQ46_RS21640 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CLQ46_RS21640 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CLQ46_RS21645 PF17206 SeqA protein N-terminal domain CLQ46_RS21645 PF03925 SeqA protein C-terminal domain CLQ46_RS21650 PF12697 Alpha/beta hydrolase family CLQ46_RS21655 PF01402 Ribbon-helix-helix protein, copG family CLQ46_RS21660 PF00258 Flavodoxin CLQ46_RS21665 PF01475 Ferric uptake regulator family CLQ46_RS21675 PF13982 YbfN-like lipoprotein CLQ46_RS21680 PF03573 outer membrane porin, OprD family CLQ46_RS21690 PF00749 tRNA synthetases class I (E and Q), catalytic domain CLQ46_RS21690 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CLQ46_RS21695 PF00367 phosphotransferase system, EIIB CLQ46_RS21695 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CLQ46_RS21695 PF02378 Phosphotransferase system, EIIC CLQ46_RS21705 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CLQ46_RS21710 PF01979 Amidohydrolase family CLQ46_RS21715 PF00480 ROK family CLQ46_RS21715 PF01047 MarR family CLQ46_RS21720 PF13344 Haloacid dehalogenase-like hydrolase CLQ46_RS21725 PF13537 Glutamine amidotransferase domain CLQ46_RS21725 PF00733 Asparagine synthase CLQ46_RS21770 PF01494 FAD binding domain CLQ46_RS21775 PF01938 TRAM domain CLQ46_RS21775 PF04055 Radical SAM superfamily CLQ46_RS21775 PF00919 Uncharacterized protein family UPF0004 CLQ46_RS21780 PF02562 PhoH-like protein CLQ46_RS21785 PF02130 Uncharacterized protein family UPF0054 CLQ46_RS21790 PF00571 CBS domain CLQ46_RS21790 PF03471 Transporter associated domain CLQ46_RS21795 PF00795 Carbon-nitrogen hydrolase CLQ46_RS21800 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ46_RS21805 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS21810 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS21815 PF00005 ABC transporter CLQ46_RS21820 PF17287 POTRA domain CLQ46_RS21820 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CLQ46_RS21820 PF08479 POTRA domain, ShlB-type CLQ46_RS21825 PF04829 Pre-toxin domain with VENN motif CLQ46_RS21825 PF14436 Bacterial EndoU nuclease CLQ46_RS21825 PF05594 Haemagluttinin repeat CLQ46_RS21825 PF13332 Hemagglutinin repeat CLQ46_RS21825 PF05860 haemagglutination activity domain CLQ46_RS21830 PF07295 Zinc-ribbon containing domain CLQ46_RS21835 PF00133 tRNA synthetases class I (I, L, M and V) CLQ46_RS21835 PF13603 Leucyl-tRNA synthetase, Domain 2 CLQ46_RS21835 PF08264 Anticodon-binding domain of tRNA CLQ46_RS21840 PF04390 Lipopolysaccharide-assembly CLQ46_RS21845 PF06144 DNA polymerase III, delta subunit CLQ46_RS21845 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CLQ46_RS21850 PF01467 Cytidylyltransferase-like CLQ46_RS21855 PF00300 Histidine phosphatase superfamily (branch 1) CLQ46_RS21870 PF02590 Predicted SPOUT methyltransferase CLQ46_RS21875 PF03717 Penicillin-binding Protein dimerisation domain CLQ46_RS21875 PF00905 Penicillin binding protein transpeptidase domain CLQ46_RS21880 PF01098 Cell cycle protein CLQ46_RS21885 PF03330 Lytic transglycolase CLQ46_RS21885 PF05036 Sporulation related domain CLQ46_RS21890 PF07943 Penicillin-binding protein 5, C-terminal domain CLQ46_RS21890 PF00768 D-alanyl-D-alanine carboxypeptidase CLQ46_RS21895 PF04359 Protein of unknown function (DUF493) CLQ46_RS21900 PF03099 Biotin/lipoate A/B protein ligase family CLQ46_RS21905 PF03466 LysR substrate binding domain CLQ46_RS21905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS21910 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CLQ46_RS21910 PF04055 Radical SAM superfamily CLQ46_RS21915 PF02416 mttA/Hcf106 family CLQ46_RS21920 PF00795 Carbon-nitrogen hydrolase CLQ46_RS21925 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CLQ46_RS21930 PF00313 'Cold-shock' DNA-binding domain CLQ46_RS21935 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CLQ46_RS21945 PF03606 C4-dicarboxylate anaerobic carrier CLQ46_RS21950 PF00445 Ribonuclease T2 family CLQ46_RS21955 PF01272 Transcription elongation factor, GreA/GreB, C-term CLQ46_RS21955 PF14760 Rnk N-terminus CLQ46_RS21960 PF00582 Universal stress protein family CLQ46_RS21965 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ46_RS21965 PF13192 Thioredoxin domain CLQ46_RS21970 PF10417 C-terminal domain of 1-Cys peroxiredoxin CLQ46_RS21970 PF00578 AhpC/TSA family CLQ46_RS21975 PF13098 Thioredoxin-like domain CLQ46_RS21980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS21980 PF03466 LysR substrate binding domain CLQ46_RS21985 PF11922 Domain of unknown function (DUF3440) CLQ46_RS21985 PF01507 Phosphoadenosine phosphosulfate reductase family CLQ46_RS21990 PF02195 ParB-like nuclease domain CLQ46_RS21995 PF00155 Aminotransferase class I and II CLQ46_RS22005 PF03079 ARD/ARD' family CLQ46_RS22010 PF00384 Molybdopterin oxidoreductase CLQ46_RS22010 PF01568 Molydopterin dinucleotide binding domain CLQ46_RS22020 PF00005 ABC transporter CLQ46_RS22025 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS22030 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS22040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLQ46_RS22040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLQ46_RS22045 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ46_RS22045 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ46_RS22050 PF00596 Class II Aldolase and Adducin N-terminal domain CLQ46_RS22055 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CLQ46_RS22065 PF07969 Amidohydrolase family CLQ46_RS22070 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS22075 PF00459 Inositol monophosphatase family CLQ46_RS22080 PF07690 Major Facilitator Superfamily CLQ46_RS22085 PF00328 Histidine phosphatase superfamily (branch 2) CLQ46_RS22090 PF01008 Initiation factor 2 subunit family CLQ46_RS22095 PF01636 Phosphotransferase enzyme family CLQ46_RS22110 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS22115 PF00005 ABC transporter CLQ46_RS22120 PF00465 Iron-containing alcohol dehydrogenase CLQ46_RS22140 PF04328 Selenoprotein, putative CLQ46_RS22160 PF03061 Thioesterase superfamily CLQ46_RS22170 PF00857 Isochorismatase family CLQ46_RS22170 PF00550 Phosphopantetheine attachment site CLQ46_RS22175 PF00501 AMP-binding enzyme CLQ46_RS22175 PF13193 AMP-binding enzyme C-terminal domain CLQ46_RS22180 PF00425 chorismate binding enzyme CLQ46_RS22185 PF01497 Periplasmic binding protein CLQ46_RS22190 PF05977 Transmembrane secretion effector CLQ46_RS22195 PF01032 FecCD transport family CLQ46_RS22200 PF01032 FecCD transport family CLQ46_RS22205 PF00005 ABC transporter CLQ46_RS22210 PF13193 AMP-binding enzyme C-terminal domain CLQ46_RS22210 PF00668 Condensation domain CLQ46_RS22210 PF00550 Phosphopantetheine attachment site CLQ46_RS22210 PF00975 Thioesterase domain CLQ46_RS22210 PF00501 AMP-binding enzyme CLQ46_RS22215 PF03621 MbtH-like protein CLQ46_RS22220 PF11806 Domain of unknown function (DUF3327) CLQ46_RS22220 PF00756 Putative esterase CLQ46_RS22225 PF07715 TonB-dependent Receptor Plug Domain CLQ46_RS22225 PF00593 TonB dependent receptor CLQ46_RS22230 PF01648 4'-phosphopantetheinyl transferase superfamily CLQ46_RS22230 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CLQ46_RS22235 PF02779 Transketolase, pyrimidine binding domain CLQ46_RS22235 PF02780 Transketolase, C-terminal domain CLQ46_RS22240 PF00456 Transketolase, thiamine diphosphate binding domain CLQ46_RS22250 PF04198 Putative sugar-binding domain CLQ46_RS22250 PF00325 Bacterial regulatory proteins, crp family CLQ46_RS22255 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ46_RS22255 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ46_RS22260 PF13407 Periplasmic binding protein domain CLQ46_RS22270 PF00005 ABC transporter CLQ46_RS22275 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS22295 PF03466 LysR substrate binding domain CLQ46_RS22295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS22300 PF00924 Mechanosensitive ion channel CLQ46_RS22310 PF02028 BCCT, betaine/carnitine/choline family transporter CLQ46_RS22320 PF13977 BetI-type transcriptional repressor, C-terminal CLQ46_RS22320 PF00440 Bacterial regulatory proteins, tetR family CLQ46_RS22325 PF00171 Aldehyde dehydrogenase family CLQ46_RS22330 PF00732 GMC oxidoreductase CLQ46_RS22330 PF05199 GMC oxidoreductase CLQ46_RS22340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ46_RS22345 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS22350 PF12911 N-terminal TM domain of oligopeptide transport permease C CLQ46_RS22350 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS22355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ46_RS22355 PF00005 ABC transporter CLQ46_RS22360 PF00005 ABC transporter CLQ46_RS22360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ46_RS22370 PF00202 Aminotransferase class-III CLQ46_RS22375 PF00106 short chain dehydrogenase CLQ46_RS22380 PF00005 ABC transporter CLQ46_RS22385 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS22390 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS22395 PF01464 Transglycosylase SLT domain CLQ46_RS22395 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ46_RS22400 PF00155 Aminotransferase class I and II CLQ46_RS22400 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS22405 PF00155 Aminotransferase class I and II CLQ46_RS22410 PF00892 EamA-like transporter family CLQ46_RS22415 PF04107 Glutamate-cysteine ligase family 2(GCS2) CLQ46_RS22420 PF09992 Phosphodiester glycosidase CLQ46_RS22430 PF00873 AcrB/AcrD/AcrF family CLQ46_RS22435 PF13533 Biotin-lipoyl like CLQ46_RS22440 PF00689 Cation transporting ATPase, C-terminus CLQ46_RS22440 PF00690 Cation transporter/ATPase, N-terminus CLQ46_RS22450 PF06643 Protein of unknown function (DUF1158) CLQ46_RS22455 PF12833 Helix-turn-helix domain CLQ46_RS22460 PF12706 Beta-lactamase superfamily domain CLQ46_RS22465 PF00440 Bacterial regulatory proteins, tetR family CLQ46_RS22470 PF04237 YjbR CLQ46_RS22475 PF00881 Nitroreductase family CLQ46_RS22485 PF03830 PTS system sorbose subfamily IIB component CLQ46_RS22495 PF03613 PTS system mannose/fructose/sorbose family IID component CLQ46_RS22500 PF01380 SIS domain CLQ46_RS22505 PF01380 SIS domain CLQ46_RS22510 PF00874 PRD domain CLQ46_RS22510 PF03610 PTS system fructose IIA component CLQ46_RS22510 PF00158 Sigma-54 interaction domain CLQ46_RS22530 PF07690 Major Facilitator Superfamily CLQ46_RS22535 PF00924 Mechanosensitive ion channel CLQ46_RS22540 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS22555 PF16449 Fimbrillin MatB CLQ46_RS22560 PF18649 EcpB C-terminal domain CLQ46_RS22565 PF16967 E-set like domain CLQ46_RS22565 PF15976 CS1-pili formation C-terminal CLQ46_RS22580 PF00196 Bacterial regulatory proteins, luxR family CLQ46_RS22590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ46_RS22590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLQ46_RS22600 PF03825 Nucleoside H+ symporter CLQ46_RS22605 PF00324 Amino acid permease CLQ46_RS22610 PF00593 TonB dependent receptor CLQ46_RS22610 PF07715 TonB-dependent Receptor Plug Domain CLQ46_RS22620 PF00171 Aldehyde dehydrogenase family CLQ46_RS22625 PF01266 FAD dependent oxidoreductase CLQ46_RS22635 PF13520 Amino acid permease CLQ46_RS22645 PF00850 Histone deacetylase domain CLQ46_RS22655 PF00196 Bacterial regulatory proteins, luxR family CLQ46_RS22660 PF04055 Radical SAM superfamily CLQ46_RS22665 PF00884 Sulfatase CLQ46_RS22675 PF10703 MoaF N-terminal domain CLQ46_RS22675 PF17409 MoaF C-terminal domain CLQ46_RS22685 PF00248 Aldo/keto reductase family CLQ46_RS22690 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ46_RS22695 PF07687 Peptidase dimerisation domain CLQ46_RS22695 PF01546 Peptidase family M20/M25/M40 CLQ46_RS22715 PF01032 FecCD transport family CLQ46_RS22720 PF00005 ABC transporter CLQ46_RS22725 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ46_RS22725 PF00529 HlyD membrane-fusion protein of T1SS CLQ46_RS22730 PF11742 Protein of unknown function (DUF3302) CLQ46_RS22740 PF00294 pfkB family carbohydrate kinase CLQ46_RS22745 PF11471 Maltoporin periplasmic N-terminal extension CLQ46_RS22745 PF02264 LamB porin CLQ46_RS22750 PF02378 Phosphotransferase system, EIIC CLQ46_RS22750 PF00367 phosphotransferase system, EIIB CLQ46_RS22755 PF08244 Glycosyl hydrolases family 32 C terminal CLQ46_RS22755 PF00251 Glycosyl hydrolases family 32 N-terminal domain CLQ46_RS22760 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS22760 PF13407 Periplasmic binding protein domain CLQ46_RS22770 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS22775 PF00005 ABC transporter CLQ46_RS22780 PF13407 Periplasmic binding protein domain CLQ46_RS22785 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS22790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ46_RS22790 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLQ46_RS22795 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLQ46_RS22795 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ46_RS22800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ46_RS22800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLQ46_RS22805 PF01261 Xylose isomerase-like TIM barrel CLQ46_RS22815 PF00152 tRNA synthetases class II (D, K and N) CLQ46_RS22815 PF01336 OB-fold nucleic acid binding domain CLQ46_RS22820 PF00854 POT family CLQ46_RS22825 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CLQ46_RS22825 PF01276 Orn/Lys/Arg decarboxylase, major domain CLQ46_RS22825 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CLQ46_RS22830 PF13520 Amino acid permease CLQ46_RS22835 PF18500 CadC C-terminal domain 1 CLQ46_RS22835 PF00486 Transcriptional regulatory protein, C terminal CLQ46_RS22845 PF03279 Bacterial lipid A biosynthesis acyltransferase CLQ46_RS22860 PF13954 PapC N-terminal domain CLQ46_RS22860 PF00577 Outer membrane usher protein CLQ46_RS22860 PF13953 PapC C-terminal domain CLQ46_RS22865 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CLQ46_RS22865 PF02753 Pili assembly chaperone PapD, C-terminal domain CLQ46_RS22870 PF16970 Type-1 fimbrial protein, A CLQ46_RS22885 PF00285 Citrate synthase, C-terminal domain CLQ46_RS22900 PF00576 HIUase/Transthyretin family CLQ46_RS22925 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CLQ46_RS22925 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CLQ46_RS22935 PF01406 tRNA synthetases class I (C) catalytic domain CLQ46_RS22935 PF09190 DALR domain CLQ46_RS22940 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CLQ46_RS22945 PF00149 Calcineurin-like phosphoesterase CLQ46_RS22960 PF00731 AIR carboxylase CLQ46_RS22965 PF02222 ATP-grasp domain CLQ46_RS22965 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CLQ46_RS22975 PF00267 Gram-negative porin CLQ46_RS22985 PF00005 ABC transporter CLQ46_RS22990 PF13472 GDSL-like Lipase/Acylhydrolase family CLQ46_RS22995 PF00106 short chain dehydrogenase CLQ46_RS23000 PF00085 Thioredoxin CLQ46_RS23010 PF03649 Uncharacterised protein family (UPF0014) CLQ46_RS23015 PF00005 ABC transporter CLQ46_RS23020 PF01145 SPFH domain / Band 7 family CLQ46_RS23020 PF16200 C-terminal region of band_7 CLQ46_RS23025 PF01957 NfeD-like C-terminal, partner-binding CLQ46_RS23030 PF13411 MerR HTH family regulatory protein CLQ46_RS23035 PF00403 Heavy-metal-associated domain CLQ46_RS23040 PF01963 TraB family CLQ46_RS23045 PF04073 Aminoacyl-tRNA editing domain CLQ46_RS23050 PF00149 Calcineurin-like phosphoesterase CLQ46_RS23050 PF02872 5'-nucleotidase, C-terminal domain CLQ46_RS23055 PF07690 Major Facilitator Superfamily CLQ46_RS23060 PF02254 TrkA-N domain CLQ46_RS23060 PF00999 Sodium/hydrogen exchanger family CLQ46_RS23065 PF00294 pfkB family carbohydrate kinase CLQ46_RS23070 PF00762 Ferrochelatase CLQ46_RS23075 PF05191 Adenylate kinase, active site lid CLQ46_RS23080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS23080 PF00183 Hsp90 protein CLQ46_RS23085 PF02132 RecR protein CLQ46_RS23085 PF13662 Toprim domain CLQ46_RS23090 PF02575 YbaB/EbfC DNA-binding family CLQ46_RS23095 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CLQ46_RS23095 PF12170 DNA polymerase III tau subunit V interacting with alpha CLQ46_RS23095 PF12169 DNA polymerase III subunits gamma and tau domain III CLQ46_RS23100 PF00156 Phosphoribosyl transferase domain CLQ46_RS23110 PF04304 Protein of unknown function (DUF454) CLQ46_RS23115 PF07445 Primosomal replication protein priC CLQ46_RS23120 PF10689 Protein of unknown function (DUF2496) CLQ46_RS23125 PF04754 Putative transposase, YhgA-like CLQ46_RS23130 PF00924 Mechanosensitive ion channel CLQ46_RS23130 PF12795 Mechanosensitive ion channel porin domain CLQ46_RS23130 PF12794 Mechanosensitive ion channel inner membrane domain 1 CLQ46_RS23150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ46_RS23150 PF00529 HlyD membrane-fusion protein of T1SS CLQ46_RS23155 PF00873 AcrB/AcrD/AcrF family CLQ46_RS23160 PF10757 Biofilm formation regulator YbaJ CLQ46_RS23165 PF05321 Haemolysin expression modulating protein CLQ46_RS23170 PF14602 Hexapeptide repeat of succinyl-transferase CLQ46_RS23170 PF12464 Maltose acetyltransferase CLQ46_RS23175 PF10777 Inner membrane protein YlaC CLQ46_RS23180 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS23180 PF00155 Aminotransferase class I and II CLQ46_RS23190 PF00444 Ribosomal protein L36 CLQ46_RS23195 PF01197 Ribosomal protein L31 CLQ46_RS23200 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS23205 PF02264 LamB porin CLQ46_RS23210 PF00367 phosphotransferase system, EIIB CLQ46_RS23210 PF02378 Phosphotransferase system, EIIC CLQ46_RS23215 PF08532 Beta-galactosidase trimerisation domain CLQ46_RS23215 PF02449 Beta-galactosidase CLQ46_RS23215 PF08533 Beta-galactosidase C-terminal domain CLQ46_RS23220 PF07745 Glycosyl hydrolase family 53 CLQ46_RS23225 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS23230 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS23235 PF13416 Bacterial extracellular solute-binding protein CLQ46_RS23240 PF00005 ABC transporter CLQ46_RS23240 PF17912 MalK OB fold domain CLQ46_RS23245 PF00563 EAL domain CLQ46_RS23245 PF12792 CSS motif domain associated with EAL CLQ46_RS23250 PF02583 Metal-sensitive transcriptional repressor CLQ46_RS23255 PF03824 High-affinity nickel-transport protein CLQ46_RS23290 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CLQ46_RS23295 PF09619 Type III secretion system lipoprotein chaperone (YscW) CLQ46_RS23305 PF00909 Ammonium Transporter Family CLQ46_RS23310 PF00543 Nitrogen regulatory protein P-II CLQ46_RS23315 PF00664 ABC transporter transmembrane region CLQ46_RS23315 PF00005 ABC transporter CLQ46_RS23320 PF00005 ABC transporter CLQ46_RS23320 PF00664 ABC transporter transmembrane region CLQ46_RS23325 PF13404 AsnC-type helix-turn-helix domain CLQ46_RS23325 PF01037 Lrp/AsnC ligand binding domain CLQ46_RS23330 PF00291 Pyridoxal-phosphate dependent enzyme CLQ46_RS23340 PF12793 Sugar transport-related sRNA regulator N-term CLQ46_RS23340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ46_RS23345 PF06508 Queuosine biosynthesis protein QueC CLQ46_RS23360 PF13145 PPIC-type PPIASE domain CLQ46_RS23365 PF00216 Bacterial DNA-binding protein CLQ46_RS23370 PF00004 ATPase family associated with various cellular activities (AAA) CLQ46_RS23370 PF02190 ATP-dependent protease La (LON) substrate-binding domain CLQ46_RS23370 PF05362 Lon protease (S16) C-terminal proteolytic domain CLQ46_RS23375 PF06689 ClpX C4-type zinc finger CLQ46_RS23375 PF10431 C-terminal, D2-small domain, of ClpB protein CLQ46_RS23375 PF07724 AAA domain (Cdc48 subfamily) CLQ46_RS23380 PF00574 Clp protease CLQ46_RS23385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CLQ46_RS23385 PF05698 Bacterial trigger factor protein (TF) C-terminus CLQ46_RS23385 PF05697 Bacterial trigger factor protein (TF) CLQ46_RS23400 PF01722 BolA-like protein CLQ46_RS23405 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CLQ46_RS23405 PF03923 Uncharacterized lipoprotein CLQ46_RS23410 PF07690 Major Facilitator Superfamily CLQ46_RS23415 PF06481 COX Aromatic Rich Motif CLQ46_RS23415 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CLQ46_RS23420 PF00115 Cytochrome C and Quinol oxidase polypeptide I CLQ46_RS23425 PF00510 Cytochrome c oxidase subunit III CLQ46_RS23430 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CLQ46_RS23435 PF01040 UbiA prenyltransferase family CLQ46_RS23445 PF01614 Bacterial transcriptional regulator CLQ46_RS23445 PF09339 IclR helix-turn-helix domain CLQ46_RS23450 PF01488 Shikimate / quinate 5-dehydrogenase CLQ46_RS23450 PF08501 Shikimate dehydrogenase substrate binding domain CLQ46_RS23450 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CLQ46_RS23455 PF00890 FAD binding domain CLQ46_RS23465 PF00890 FAD binding domain CLQ46_RS23475 PF07690 Major Facilitator Superfamily CLQ46_RS23480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ46_RS23480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLQ46_RS23485 PF07690 Major Facilitator Superfamily CLQ46_RS23490 PF04461 Protein of unknown function (DUF520) CLQ46_RS23495 PF08546 Ketopantoate reductase PanE/ApbA C terminal CLQ46_RS23495 PF02558 Ketopantoate reductase PanE/ApbA CLQ46_RS23500 PF01965 DJ-1/PfpI family CLQ46_RS23510 PF02568 Thiamine biosynthesis protein (ThiI) CLQ46_RS23510 PF02926 THUMP domain CLQ46_RS23515 PF02609 Exonuclease VII small subunit CLQ46_RS23520 PF00348 Polyprenyl synthetase CLQ46_RS23525 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CLQ46_RS23525 PF02780 Transketolase, C-terminal domain CLQ46_RS23525 PF02779 Transketolase, pyrimidine binding domain CLQ46_RS23530 PF00248 Aldo/keto reductase family CLQ46_RS23535 PF04608 Phosphatidylglycerophosphatase A CLQ46_RS23540 PF00586 AIR synthase related protein, N-terminal domain CLQ46_RS23540 PF02769 AIR synthase related protein, C-terminal domain CLQ46_RS23545 PF01029 NusB family CLQ46_RS23550 PF00885 6,7-dimethyl-8-ribityllumazine synthase CLQ46_RS23555 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLQ46_RS23555 PF01872 RibD C-terminal domain CLQ46_RS23560 PF03477 ATP cone domain CLQ46_RS23565 PF11622 Protein of unknown function (DUF3251) CLQ46_RS23570 PF03502 Nucleoside-specific channel-forming protein, Tsx CLQ46_RS23585 PF07549 SecD/SecF GG Motif CLQ46_RS23585 PF02355 Protein export membrane protein CLQ46_RS23590 PF13721 SecD export protein N-terminal TM region CLQ46_RS23590 PF07549 SecD/SecF GG Motif CLQ46_RS23590 PF02355 Protein export membrane protein CLQ46_RS23595 PF02699 Preprotein translocase subunit CLQ46_RS23600 PF01702 Queuine tRNA-ribosyltransferase CLQ46_RS23605 PF02547 Queuosine biosynthesis protein CLQ46_RS23610 PF04336 Acyl carrier protein phosphodiesterase CLQ46_RS23615 PF10417 C-terminal domain of 1-Cys peroxiredoxin CLQ46_RS23615 PF00578 AhpC/TSA family CLQ46_RS23620 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ46_RS23630 PF03611 PTS system sugar-specific permease component CLQ46_RS23635 PF00294 pfkB family carbohydrate kinase CLQ46_RS23640 PF01116 Fructose-bisphosphate aldolase class-II CLQ46_RS23645 PF01979 Amidohydrolase family CLQ46_RS23655 PF00857 Isochorismatase family CLQ46_RS23660 PF03466 LysR substrate binding domain CLQ46_RS23660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS23665 PF02903 Alpha amylase, N-terminal ig-like domain CLQ46_RS23665 PF00128 Alpha amylase, catalytic domain CLQ46_RS23670 PF00324 Amino acid permease CLQ46_RS23675 PF05525 Branched-chain amino acid transport protein CLQ46_RS23680 PF11808 Phosphate regulon sensor protein PhoR CLQ46_RS23680 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS23680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS23680 PF00989 PAS fold CLQ46_RS23685 PF00486 Transcriptional regulatory protein, C terminal CLQ46_RS23685 PF00072 Response regulator receiver domain CLQ46_RS23690 PF00149 Calcineurin-like phosphoesterase CLQ46_RS23690 PF12320 Type 5 capsule protein repressor C-terminal domain CLQ46_RS23695 PF13476 AAA domain CLQ46_RS23700 PF00480 ROK family CLQ46_RS23705 PF04381 Putative exonuclease, RdgC CLQ46_RS23710 PF06865 Pyrimidine/purine nucleoside phosphorylase CLQ46_RS23715 PF07302 AroM protein CLQ46_RS23720 PF16362 YaiA protein CLQ46_RS23725 PF01202 Shikimate kinase CLQ46_RS23730 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) CLQ46_RS23735 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CLQ46_RS23740 PF03807 NADP oxidoreductase coenzyme F420-dependent CLQ46_RS23740 PF14748 Pyrroline-5-carboxylate reductase dimerisation CLQ46_RS23745 PF07769 psiF repeat CLQ46_RS23750 PF00245 Alkaline phosphatase CLQ46_RS23755 PF10796 Sigma-S stabilisation anti-adaptor protein CLQ46_RS23760 PF07690 Major Facilitator Superfamily CLQ46_RS23770 PF07478 D-ala D-ala ligase C-terminus CLQ46_RS23770 PF01820 D-ala D-ala ligase N-terminus CLQ46_RS23775 PF10953 Protein of unknown function (DUF2754) CLQ46_RS23780 PF10954 Protein of unknown function (DUF2755) CLQ46_RS23785 PF07759 Protein of unknown function (DUF1615) CLQ46_RS23790 PF05992 SbmA/BacA-like family CLQ46_RS23795 PF00857 Isochorismatase family CLQ46_RS23800 PF00144 Beta-lactamase CLQ46_RS23805 PF00490 Delta-aminolevulinic acid dehydratase CLQ46_RS23815 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CLQ46_RS23820 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS23825 PF00005 ABC transporter CLQ46_RS23830 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CLQ46_RS23835 PF02574 Homocysteine S-methyltransferase CLQ46_RS23840 PF00324 Amino acid permease CLQ46_RS23845 PF00324 Amino acid permease CLQ46_RS23850 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CLQ46_RS23855 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CLQ46_RS23860 PF13458 Periplasmic binding protein CLQ46_RS23865 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS23870 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS23870 PF11862 Domain of unknown function (DUF3382) CLQ46_RS23875 PF00005 ABC transporter CLQ46_RS23875 PF12399 Branched-chain amino acid ATP-binding cassette transporter CLQ46_RS23880 PF00005 ABC transporter CLQ46_RS23890 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ46_RS23895 PF00005 ABC transporter CLQ46_RS23900 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS23905 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS23920 PF15976 CS1-pili formation C-terminal CLQ46_RS23920 PF16967 E-set like domain CLQ46_RS23925 PF18649 EcpB C-terminal domain CLQ46_RS23930 PF16449 Fimbrillin MatB CLQ46_RS23935 PF00196 Bacterial regulatory proteins, luxR family CLQ46_RS23940 PF00005 ABC transporter CLQ46_RS23950 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS23955 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS23985 PF00877 NlpC/P60 family CLQ46_RS23990 PF00267 Gram-negative porin CLQ46_RS23995 PF00696 Amino acid kinase family CLQ46_RS23995 PF01472 PUA domain CLQ46_RS24000 PF00171 Aldehyde dehydrogenase family CLQ46_RS24010 PF13356 Arm DNA-binding domain CLQ46_RS24010 PF14659 Phage integrase, N-terminal SAM-like domain CLQ46_RS24010 PF00589 Phage integrase family CLQ46_RS24015 PF13614 AAA domain CLQ46_RS24030 PF04606 Ogr/Delta-like zinc finger CLQ46_RS24055 PF17345 Family of unknown function (DUF5375) CLQ46_RS24070 PF13191 AAA ATPase domain CLQ46_RS24070 PF00069 Protein kinase domain CLQ46_RS24075 PF00676 Dehydrogenase E1 component CLQ46_RS24080 PF02779 Transketolase, pyrimidine binding domain CLQ46_RS24080 PF02780 Transketolase, C-terminal domain CLQ46_RS24085 PF00364 Biotin-requiring enzyme CLQ46_RS24085 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CLQ46_RS24085 PF02817 e3 binding domain CLQ46_RS24090 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ46_RS24090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLQ46_RS24105 PF01791 DeoC/LacD family aldolase CLQ46_RS24115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ46_RS24115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ46_RS24125 PF01842 ACT domain CLQ46_RS24125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLQ46_RS24125 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLQ46_RS24130 PF03611 PTS system sugar-specific permease component CLQ46_RS24135 PF00043 Glutathione S-transferase, C-terminal domain CLQ46_RS24135 PF13417 Glutathione S-transferase, N-terminal domain CLQ46_RS24140 PF13847 Methyltransferase domain CLQ46_RS24145 PF09857 Putative toxin of bacterial toxin-antitoxin pair CLQ46_RS24155 PF08943 CsiD CLQ46_RS24160 PF01266 FAD dependent oxidoreductase CLQ46_RS24165 PF00171 Aldehyde dehydrogenase family CLQ46_RS24170 PF00202 Aminotransferase class-III CLQ46_RS24175 PF00324 Amino acid permease CLQ46_RS24180 PF07729 FCD domain CLQ46_RS24180 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS24185 PF07417 Sigma factor-binding transcriptional regulator Crl CLQ46_RS24190 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) CLQ46_RS24195 PF00156 Phosphoribosyl transferase domain CLQ46_RS24200 PF07687 Peptidase dimerisation domain CLQ46_RS24200 PF01546 Peptidase family M20/M25/M40 CLQ46_RS24205 PF13673 Acetyltransferase (GNAT) domain CLQ46_RS24210 PF00817 impB/mucB/samB family CLQ46_RS24210 PF11799 impB/mucB/samB family C-terminal domain CLQ46_RS24210 PF11798 IMS family HHH motif CLQ46_RS24215 PF03009 Glycerophosphoryl diester phosphodiesterase family CLQ46_RS24220 PF04400 (Na+)-NQR maturation NqrM CLQ46_RS24225 PF00111 2Fe-2S iron-sulfur cluster binding domain CLQ46_RS24225 PF00175 Oxidoreductase NAD-binding domain CLQ46_RS24225 PF00970 Oxidoreductase FAD-binding domain CLQ46_RS24230 PF02508 Rnf-Nqr subunit, membrane protein CLQ46_RS24235 PF02508 Rnf-Nqr subunit, membrane protein CLQ46_RS24240 PF04205 FMN-binding domain CLQ46_RS24245 PF03116 NQR2, RnfD, RnfE family CLQ46_RS24250 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CLQ46_RS24250 PF11973 NQRA C-terminal domain CLQ46_RS24260 PF03734 L,D-transpeptidase catalytic domain CLQ46_RS24265 PF13230 Glutamine amidotransferases class-II CLQ46_RS24270 PF13580 SIS domain CLQ46_RS24275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CLQ46_RS24275 PF09317 Domain of unknown function (DUF1974) CLQ46_RS24275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CLQ46_RS24275 PF02770 Acyl-CoA dehydrogenase, middle domain CLQ46_RS24280 PF00795 Carbon-nitrogen hydrolase CLQ46_RS24285 PF01810 LysE type translocator CLQ46_RS24290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS24290 PF03466 LysR substrate binding domain CLQ46_RS24305 PF00929 Exonuclease CLQ46_RS24310 PF00075 RNase H CLQ46_RS24315 PF08241 Methyltransferase domain CLQ46_RS24320 PF16123 Hydroxyacylglutathione hydrolase C-terminus CLQ46_RS24320 PF00753 Metallo-beta-lactamase superfamily CLQ46_RS24325 PF01464 Transglycosylase SLT domain CLQ46_RS24325 PF01476 LysM domain CLQ46_RS24330 PF08241 Methyltransferase domain CLQ46_RS24335 PF03372 Endonuclease/Exonuclease/phosphatase family CLQ46_RS24340 PF07690 Major Facilitator Superfamily CLQ46_RS24345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS24345 PF03466 LysR substrate binding domain CLQ46_RS24350 PF00248 Aldo/keto reductase family CLQ46_RS24395 PF00005 ABC transporter CLQ46_RS24395 PF09383 NIL domain CLQ46_RS24400 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS24405 PF03180 NLPA lipoprotein CLQ46_RS24410 PF16358 RcsF lipoprotein CLQ46_RS24415 PF01980 tRNA-methyltransferase O CLQ46_RS24415 PF18389 TrmO C-terminal domain CLQ46_RS24420 PF04073 Aminoacyl-tRNA editing domain CLQ46_RS24420 PF03129 Anticodon binding domain CLQ46_RS24420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLQ46_RS24425 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CLQ46_RS24430 PF17185 NlpE C-terminal OB domain CLQ46_RS24430 PF04170 NlpE N-terminal domain CLQ46_RS24435 PF00472 RF-1 domain CLQ46_RS24440 PF07152 YaeQ protein CLQ46_RS24445 PF06786 Uncharacterised protein family (UPF0253) CLQ46_RS24450 PF07073 Modulator of Rho-dependent transcription termination (ROF) CLQ46_RS24455 PF09179 TilS substrate binding domain CLQ46_RS24455 PF11734 TilS substrate C-terminal domain CLQ46_RS24455 PF01171 PP-loop family CLQ46_RS24460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CLQ46_RS24465 PF01276 Orn/Lys/Arg decarboxylase, major domain CLQ46_RS24465 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CLQ46_RS24465 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CLQ46_RS24470 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CLQ46_RS24475 PF01336 OB-fold nucleic acid binding domain CLQ46_RS24475 PF07733 Bacterial DNA polymerase III alpha NTPase domain CLQ46_RS24475 PF02811 PHP domain CLQ46_RS24475 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CLQ46_RS24475 PF14579 Helix-hairpin-helix motif CLQ46_RS24480 PF01351 Ribonuclease HII CLQ46_RS24485 PF02684 Lipid-A-disaccharide synthetase CLQ46_RS24490 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CLQ46_RS24490 PF00132 Bacterial transferase hexapeptide (six repeats) CLQ46_RS24495 PF07977 FabA-like domain CLQ46_RS24500 PF00132 Bacterial transferase hexapeptide (six repeats) CLQ46_RS24500 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CLQ46_RS24505 PF03938 Outer membrane protein (OmpH-like) CLQ46_RS24510 PF07244 Surface antigen variable number repeat CLQ46_RS24510 PF01103 Surface antigen CLQ46_RS24515 PF17820 PDZ domain CLQ46_RS24515 PF02163 Peptidase family M50 CLQ46_RS24525 PF01255 Putative undecaprenyl diphosphate synthase CLQ46_RS24535 PF13288 DXP reductoisomerase C-terminal domain CLQ46_RS24535 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CLQ46_RS24535 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CLQ46_RS24540 PF01765 Ribosome recycling factor CLQ46_RS24545 PF00696 Amino acid kinase family CLQ46_RS24550 PF00889 Elongation factor TS CLQ46_RS24555 PF00318 Ribosomal protein S2 CLQ46_RS24560 PF00557 Metallopeptidase family M24 CLQ46_RS24565 PF08335 GlnD PII-uridylyltransferase CLQ46_RS24565 PF01842 ACT domain CLQ46_RS24565 PF01909 Nucleotidyltransferase domain CLQ46_RS24565 PF01966 HD domain CLQ46_RS24570 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CLQ46_RS24570 PF14602 Hexapeptide repeat of succinyl-transferase CLQ46_RS24570 PF00132 Bacterial transferase hexapeptide (six repeats) CLQ46_RS24575 PF11944 Protein of unknown function (DUF3461) CLQ46_RS24580 PF13556 PucR C-terminal helix-turn-helix domain CLQ46_RS24580 PF05651 Putative sugar diacid recognition CLQ46_RS24580 PF17853 GGDEF-like domain CLQ46_RS24585 PF00595 PDZ domain CLQ46_RS24590 PF01966 HD domain CLQ46_RS24590 PF13286 Phosphohydrolase-associated domain CLQ46_RS24595 PF01048 Phosphorylase superfamily CLQ46_RS24600 PF01497 Periplasmic binding protein CLQ46_RS24605 PF03458 UPF0126 domain CLQ46_RS24610 PF01521 Iron-sulphur cluster biosynthesis CLQ46_RS24615 PF00654 Voltage gated chloride channel CLQ46_RS24620 PF00202 Aminotransferase class-III CLQ46_RS24625 PF01032 FecCD transport family CLQ46_RS24630 PF01497 Periplasmic binding protein CLQ46_RS24635 PF00005 ABC transporter CLQ46_RS24645 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal CLQ46_RS24645 PF14814 Bifunctional transglycosylase second domain CLQ46_RS24645 PF00912 Transglycosylase CLQ46_RS24645 PF00905 Penicillin binding protein transpeptidase domain CLQ46_RS24655 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CLQ46_RS24660 PF16537 Type II secretion system protein B CLQ46_RS24665 PF17967 Pullulanase N2 domain CLQ46_RS24665 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CLQ46_RS24665 PF18494 Pullulanase Ins domain CLQ46_RS24665 PF11852 Domain of unknown function (DUF3372) CLQ46_RS24665 PF03714 Bacterial pullanase-associated domain CLQ46_RS24670 PF11356 Type II secretion system protein C CLQ46_RS24675 PF03958 Bacterial type II/III secretion system short domain CLQ46_RS24675 PF00263 Bacterial type II and III secretion system protein CLQ46_RS24680 PF00437 Type II/IV secretion system protein CLQ46_RS24685 PF00482 Type II secretion system (T2SS), protein F CLQ46_RS24690 PF07963 Prokaryotic N-terminal methylation motif CLQ46_RS24690 PF08334 Type II secretion system (T2SS), protein G CLQ46_RS24695 PF07963 Prokaryotic N-terminal methylation motif CLQ46_RS24700 PF02501 Type II secretion system (T2SS), protein I CLQ46_RS24700 PF07963 Prokaryotic N-terminal methylation motif CLQ46_RS24705 PF11612 Type II secretion system (T2SS), protein J CLQ46_RS24705 PF07963 Prokaryotic N-terminal methylation motif CLQ46_RS24710 PF03934 Type II secretion system (T2SS), protein K CLQ46_RS24715 PF12693 GspL periplasmic domain CLQ46_RS24715 PF05134 Type II secretion system (T2SS), protein L CLQ46_RS24720 PF04612 Type II secretion system (T2SS), protein M CLQ46_RS24725 PF01203 Type II secretion system (T2SS), protein N CLQ46_RS24730 PF01478 Type IV leader peptidase family CLQ46_RS24730 PF06750 Bacterial Peptidase A24 N-terminal domain CLQ46_RS24735 PF00271 Helicase conserved C-terminal domain CLQ46_RS24735 PF00270 DEAD/DEAH box helicase CLQ46_RS24735 PF08482 ATP-dependent helicase C-terminal CLQ46_RS24735 PF04408 Helicase associated domain (HA2) CLQ46_RS24740 PF02834 LigT like Phosphoesterase CLQ46_RS24745 PF17746 SfsA N-terminal OB domain CLQ46_RS24745 PF03749 Sugar fermentation stimulation protein RE domain CLQ46_RS24750 PF01258 Prokaryotic dksA/traR C4-type zinc finger CLQ46_RS24755 PF00749 tRNA synthetases class I (E and Q), catalytic domain CLQ46_RS24760 PF12627 Probable RNA and SrmB- binding site of polymerase A CLQ46_RS24760 PF01743 Poly A polymerase head domain CLQ46_RS24760 PF12626 Polymerase A arginine-rich C-terminus CLQ46_RS24765 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CLQ46_RS24770 PF02548 Ketopantoate hydroxymethyltransferase CLQ46_RS24775 PF02569 Pantoate-beta-alanine ligase CLQ46_RS24780 PF02261 Aspartate decarboxylase CLQ46_RS24785 PF01522 Polysaccharide deacetylase CLQ46_RS24790 PF03610 PTS system fructose IIA component CLQ46_RS24795 PF01061 ABC-2 type transporter CLQ46_RS24800 PF00005 ABC transporter CLQ46_RS24805 PF00484 Carbonic anhydrase CLQ46_RS24810 PF00156 Phosphoribosyl transferase domain CLQ46_RS24815 PF01011 PQQ enzyme repeat CLQ46_RS24820 PF00394 Multicopper oxidase CLQ46_RS24820 PF07731 Multicopper oxidase CLQ46_RS24820 PF07732 Multicopper oxidase CLQ46_RS24825 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CLQ46_RS24850 PF17284 Spermidine synthase tetramerisation domain CLQ46_RS24855 PF02675 S-adenosylmethionine decarboxylase CLQ46_RS24860 PF06062 Uncharacterised protein family (UPF0231) CLQ46_RS24865 PF11791 Aconitate B N-terminal domain CLQ46_RS24865 PF06434 Aconitate hydratase 2 N-terminus CLQ46_RS24865 PF00330 Aconitase family (aconitate hydratase) CLQ46_RS24875 PF11737 Protein of unknown function (DUF3300) CLQ46_RS24890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLQ46_RS24890 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ46_RS24895 PF02817 e3 binding domain CLQ46_RS24895 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CLQ46_RS24895 PF00364 Biotin-requiring enzyme CLQ46_RS24900 PF17831 Pyruvate dehydrogenase E1 component middle domain CLQ46_RS24900 PF00456 Transketolase, thiamine diphosphate binding domain CLQ46_RS24905 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS24905 PF07729 FCD domain CLQ46_RS24910 PF00324 Amino acid permease CLQ46_RS24920 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain CLQ46_RS24920 PF04616 Glycosyl hydrolases family 43 CLQ46_RS24925 PF17113 Regulatory signalling modulator protein AmpE CLQ46_RS24930 PF01510 N-acetylmuramoyl-L-alanine amidase CLQ46_RS24935 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CLQ46_RS24935 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CLQ46_RS24940 PF07963 Prokaryotic N-terminal methylation motif CLQ46_RS24945 PF00437 Type II/IV secretion system protein CLQ46_RS24945 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CLQ46_RS24950 PF00482 Type II secretion system (T2SS), protein F CLQ46_RS24955 PF00478 IMP dehydrogenase / GMP reductase domain CLQ46_RS24960 PF01121 Dephospho-CoA kinase CLQ46_RS24965 PF07072 Cell division protein CLQ46_RS24970 PF03884 DNA gyrase inhibitor YacG CLQ46_RS24975 PF00293 NUDIX domain CLQ46_RS24980 PF07516 SecA Wing and Scaffold domain CLQ46_RS24980 PF01043 SecA preprotein cross-linking domain CLQ46_RS24980 PF07517 SecA DEAD-like domain CLQ46_RS24980 PF02810 SEC-C motif CLQ46_RS24985 PF06558 Secretion monitor precursor protein (SecM) CLQ46_RS24990 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CLQ46_RS24995 PF12327 FtsZ family, C-terminal domain CLQ46_RS24995 PF00091 Tubulin/FtsZ family, GTPase domain CLQ46_RS25000 PF02491 SHS2 domain inserted in FTSA CLQ46_RS25005 PF03799 Cell division protein FtsQ CLQ46_RS25005 PF08478 POTRA domain, FtsQ-type CLQ46_RS25010 PF07478 D-ala D-ala ligase C-terminus CLQ46_RS25010 PF01820 D-ala D-ala ligase N-terminus CLQ46_RS25015 PF08245 Mur ligase middle domain CLQ46_RS25015 PF01225 Mur ligase family, catalytic domain CLQ46_RS25015 PF02875 Mur ligase family, glutamate ligase domain CLQ46_RS25020 PF03033 Glycosyltransferase family 28 N-terminal domain CLQ46_RS25020 PF04101 Glycosyltransferase family 28 C-terminal domain CLQ46_RS25025 PF01098 Cell cycle protein CLQ46_RS25030 PF02875 Mur ligase family, glutamate ligase domain CLQ46_RS25030 PF08245 Mur ligase middle domain CLQ46_RS25035 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CLQ46_RS25035 PF00953 Glycosyl transferase family 4 CLQ46_RS25040 PF02875 Mur ligase family, glutamate ligase domain CLQ46_RS25040 PF01225 Mur ligase family, catalytic domain CLQ46_RS25040 PF08245 Mur ligase middle domain CLQ46_RS25045 PF01225 Mur ligase family, catalytic domain CLQ46_RS25045 PF02875 Mur ligase family, glutamate ligase domain CLQ46_RS25045 PF08245 Mur ligase middle domain CLQ46_RS25050 PF03717 Penicillin-binding Protein dimerisation domain CLQ46_RS25050 PF00905 Penicillin binding protein transpeptidase domain CLQ46_RS25055 PF04999 Cell division protein FtsL CLQ46_RS25060 PF01795 MraW methylase family CLQ46_RS25065 PF02381 MraZ protein, putative antitoxin-like CLQ46_RS25075 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CLQ46_RS25075 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS25080 PF10369 Small subunit of acetolactate synthase CLQ46_RS25085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ46_RS25085 PF00205 Thiamine pyrophosphate enzyme, central domain CLQ46_RS25085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLQ46_RS25095 PF03466 LysR substrate binding domain CLQ46_RS25095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS25105 PF00682 HMGL-like CLQ46_RS25105 PF08502 LeuA allosteric (dimerisation) domain CLQ46_RS25110 PF00180 Isocitrate/isopropylmalate dehydrogenase CLQ46_RS25115 PF00330 Aconitase family (aconitate hydratase) CLQ46_RS25120 PF00694 Aconitase C-terminal domain CLQ46_RS25125 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ46_RS25125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLQ46_RS25130 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CLQ46_RS25130 PF08501 Shikimate dehydrogenase substrate binding domain CLQ46_RS25135 PF07690 Major Facilitator Superfamily CLQ46_RS25140 PF01487 Type I 3-dehydroquinase CLQ46_RS25145 PF03466 LysR substrate binding domain CLQ46_RS25145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS25150 PF07690 Major Facilitator Superfamily CLQ46_RS25155 PF07690 Major Facilitator Superfamily CLQ46_RS25165 PF12793 Sugar transport-related sRNA regulator N-term CLQ46_RS25165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ46_RS25175 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS25180 PF00005 ABC transporter CLQ46_RS25185 PF09335 SNARE associated Golgi protein CLQ46_RS25190 PF02311 AraC-like ligand binding domain CLQ46_RS25190 PF12833 Helix-turn-helix domain CLQ46_RS25195 PF13610 DDE domain CLQ46_RS25210 PF13610 DDE domain CLQ46_RS25220 PF03104 DNA polymerase family B, exonuclease domain CLQ46_RS25220 PF00136 DNA polymerase family B CLQ46_RS25225 PF00596 Class II Aldolase and Adducin N-terminal domain CLQ46_RS25230 PF02610 L-arabinose isomerase CLQ46_RS25230 PF11762 L-arabinose isomerase C-terminal domain CLQ46_RS25235 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ46_RS25245 PF13610 DDE domain CLQ46_RS25255 PF00849 RNA pseudouridylate synthase CLQ46_RS25260 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CLQ46_RS25270 PF03390 2-hydroxycarboxylate transporter family CLQ46_RS25275 PF17203 Single cache domain 3 CLQ46_RS25275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS25280 PF00072 Response regulator receiver domain CLQ46_RS25280 PF12431 Transcriptional regulator CLQ46_RS25285 PF05099 Tellurite resistance protein TerB CLQ46_RS25285 PF00226 DnaJ domain CLQ46_RS25290 PF04453 LPS transport system D CLQ46_RS25290 PF03968 OstA-like protein CLQ46_RS25295 PF00639 PPIC-type PPIASE domain CLQ46_RS25295 PF09312 SurA N-terminal domain CLQ46_RS25300 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CLQ46_RS25305 PF00398 Ribosomal RNA adenine dimethylase CLQ46_RS25310 PF04379 ApaG domain CLQ46_RS25315 PF00149 Calcineurin-like phosphoesterase CLQ46_RS25325 PF00186 Dihydrofolate reductase CLQ46_RS25335 PF02254 TrkA-N domain CLQ46_RS25335 PF00999 Sodium/hydrogen exchanger family CLQ46_RS25340 PF02525 Flavodoxin-like fold CLQ46_RS25345 PF06004 Bacterial protein of unknown function (DUF903) CLQ46_RS25350 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CLQ46_RS25350 PF02142 MGS-like domain CLQ46_RS25350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLQ46_RS25355 PF00117 Glutamine amidotransferase class-I CLQ46_RS25355 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CLQ46_RS25365 PF01113 Dihydrodipicolinate reductase, N-terminus CLQ46_RS25365 PF05173 Dihydrodipicolinate reductase, C-terminus CLQ46_RS25370 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CLQ46_RS25375 PF04223 Citrate lyase, alpha subunit (CitF) CLQ46_RS25380 PF03328 HpcH/HpaI aldolase/citrate lyase family CLQ46_RS25385 PF06857 Malonate decarboxylase delta subunit (MdcD) CLQ46_RS25390 PF00583 Acetyltransferase (GNAT) family CLQ46_RS25390 PF08218 Citrate lyase ligase C-terminal domain CLQ46_RS25395 PF03390 2-hydroxycarboxylate transporter family CLQ46_RS25400 PF04277 Oxaloacetate decarboxylase, gamma chain CLQ46_RS25405 PF02436 Conserved carboxylase domain CLQ46_RS25405 PF00682 HMGL-like CLQ46_RS25405 PF00364 Biotin-requiring enzyme CLQ46_RS25410 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CLQ46_RS25415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS25415 PF17203 Single cache domain 3 CLQ46_RS25420 PF12431 Transcriptional regulator CLQ46_RS25420 PF00072 Response regulator receiver domain CLQ46_RS25425 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLQ46_RS25425 PF01411 tRNA synthetases class II (A) CLQ46_RS25425 PF02272 DHHA1 domain CLQ46_RS25430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS25430 PF03466 LysR substrate binding domain CLQ46_RS25440 PF01156 Inosine-uridine preferring nucleoside hydrolase CLQ46_RS25445 PF02401 LytB protein CLQ46_RS25450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CLQ46_RS25455 PF01252 Signal peptidase (SPase) II CLQ46_RS25460 PF08264 Anticodon-binding domain of tRNA CLQ46_RS25460 PF00133 tRNA synthetases class I (I, L, M and V) CLQ46_RS25460 PF06827 Zinc finger found in FPG and IleRS CLQ46_RS25465 PF06574 FAD synthetase CLQ46_RS25465 PF01687 Riboflavin kinase CLQ46_RS25470 PF10837 Protein of unknown function (DUF2575) CLQ46_RS25480 PF01649 Ribosomal protein S20 CLQ46_RS25485 PF03466 LysR substrate binding domain CLQ46_RS25485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS25490 PF06965 Na+/H+ antiporter 1 CLQ46_RS25495 PF00684 DnaJ central domain CLQ46_RS25495 PF01556 DnaJ C terminal domain CLQ46_RS25495 PF00226 DnaJ domain CLQ46_RS25500 PF00012 Hsp70 protein CLQ46_RS25505 PF10807 Protein of unknown function (DUF2541) CLQ46_RS25510 PF03981 Ubiquinol-cytochrome C chaperone CLQ46_RS25510 PF13099 Domain of unknown function (DUF3944) CLQ46_RS25515 PF01184 GPR1/FUN34/yaaH family CLQ46_RS25520 PF07690 Major Facilitator Superfamily CLQ46_RS25525 PF00994 Probable molybdopterin binding domain CLQ46_RS25530 PF00923 Transaldolase/Fructose-6-phosphate aldolase CLQ46_RS25535 PF01235 Sodium:alanine symporter family CLQ46_RS25540 PF03883 Peroxide stress protein YaaA CLQ46_RS25550 PF00291 Pyridoxal-phosphate dependent enzyme CLQ46_RS25550 PF14821 Threonine synthase N terminus CLQ46_RS25555 PF08544 GHMP kinases C terminal CLQ46_RS25555 PF00288 GHMP kinases N terminal domain CLQ46_RS25560 PF03447 Homoserine dehydrogenase, NAD binding domain CLQ46_RS25560 PF00742 Homoserine dehydrogenase CLQ46_RS25560 PF00696 Amino acid kinase family CLQ46_RS25560 PF01842 ACT domain CLQ46_RS25560 PF13840 ACT domain CLQ46_RS25565 PF08254 Threonine leader peptide CLQ46_RS25570 PF00588 SpoU rRNA Methylase family CLQ46_RS25585 PF00072 Response regulator receiver domain CLQ46_RS25585 PF00486 Transcriptional regulatory protein, C terminal CLQ46_RS25590 PF06123 Inner membrane protein CreD CLQ46_RS25595 PF00672 HAMP domain CLQ46_RS25595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS25595 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS25600 PF00072 Response regulator receiver domain CLQ46_RS25600 PF00486 Transcriptional regulatory protein, C terminal CLQ46_RS25605 PF05981 CreA protein CLQ46_RS25610 PF06445 GyrI-like small molecule binding domain CLQ46_RS25610 PF12833 Helix-turn-helix domain CLQ46_RS25615 PF00300 Histidine phosphatase superfamily (branch 1) CLQ46_RS25620 PF01931 Protein of unknown function DUF84 CLQ46_RS25625 PF01371 Trp repressor protein CLQ46_RS25630 PF14718 Soluble lytic murein transglycosylase L domain CLQ46_RS25630 PF01464 Transglycosylase SLT domain CLQ46_RS25640 PF12848 ABC transporter CLQ46_RS25640 PF00005 ABC transporter CLQ46_RS25645 PF01381 Helix-turn-helix CLQ46_RS25645 PF13521 AAA domain CLQ46_RS25650 PF18073 Rubredoxin metal binding domain CLQ46_RS25655 PF18429 Domain of unknown function (DUF5609) CLQ46_RS25665 PF10144 Bacterial virulence factor haemolysin CLQ46_RS25670 PF10437 Bacterial lipoate protein ligase C-terminus CLQ46_RS25670 PF03099 Biotin/lipoate A/B protein ligase family CLQ46_RS25675 PF01048 Phosphorylase superfamily CLQ46_RS25680 PF01676 Metalloenzyme superfamily CLQ46_RS25685 PF02885 Glycosyl transferase family, helical bundle domain CLQ46_RS25685 PF00591 Glycosyl transferase family, a/b domain CLQ46_RS25685 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CLQ46_RS25690 PF01791 DeoC/LacD family aldolase CLQ46_RS25695 PF01773 Na+ dependent nucleoside transporter N-terminus CLQ46_RS25695 PF07662 Na+ dependent nucleoside transporter C-terminus CLQ46_RS25695 PF07670 Nucleoside recognition CLQ46_RS25700 PF01026 TatD related DNase CLQ46_RS25705 PF01734 Patatin-like phospholipase CLQ46_RS25710 PF07043 Protein of unknown function (DUF1328) CLQ46_RS25715 PF04972 BON domain CLQ46_RS25720 PF16658 Class II release factor RF3, C-terminal domain CLQ46_RS25720 PF03144 Elongation factor Tu domain 2 CLQ46_RS25720 PF00009 Elongation factor Tu GTP binding domain CLQ46_RS25725 PF13419 Haloacid dehalogenase-like hydrolase CLQ46_RS25730 PF00583 Acetyltransferase (GNAT) family CLQ46_RS25735 PF03603 DNA polymerase III psi subunit CLQ46_RS25740 PF05175 Methyltransferase small domain CLQ46_RS25740 PF08468 Methyltransferase small domain N-terminal CLQ46_RS25760 PF07256 Protein of unknown function (DUF1435) CLQ46_RS25765 PF00990 Diguanylate cyclase, GGDEF domain CLQ46_RS25770 PF11575 FhuF 2Fe-2S C-terminal domain CLQ46_RS25770 PF06276 Ferric iron reductase FhuF-like transporter CLQ46_RS25775 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ46_RS25775 PF02378 Phosphotransferase system, EIIC CLQ46_RS25780 PF04073 Aminoacyl-tRNA editing domain CLQ46_RS25785 PF00196 Bacterial regulatory proteins, luxR family CLQ46_RS25790 PF00196 Bacterial regulatory proteins, luxR family CLQ46_RS25800 PF01494 FAD binding domain CLQ46_RS25810 PF06738 Putative threonine/serine exporter CLQ46_RS25815 PF12821 Threonine/Serine exporter, ThrE CLQ46_RS25820 PF17948 DnaT DNA-binding domain CLQ46_RS25825 PF01695 IstB-like ATP binding protein CLQ46_RS25830 PF10696 Protein of unknown function (DUF2501) CLQ46_RS25835 PF00884 Sulfatase CLQ46_RS25840 PF04754 Putative transposase, YhgA-like CLQ46_RS25845 PF01380 SIS domain CLQ46_RS25850 PF01380 SIS domain CLQ46_RS25855 PF03613 PTS system mannose/fructose/sorbose family IID component CLQ46_RS25860 PF03609 PTS system sorbose-specific iic component CLQ46_RS25865 PF03830 PTS system sorbose subfamily IIB component CLQ46_RS25870 PF03830 PTS system sorbose subfamily IIB component CLQ46_RS25870 PF03610 PTS system fructose IIA component CLQ46_RS25875 PF00158 Sigma-54 interaction domain CLQ46_RS25875 PF00874 PRD domain CLQ46_RS25875 PF03610 PTS system fructose IIA component CLQ46_RS25880 PF08125 Mannitol dehydrogenase C-terminal domain CLQ46_RS25880 PF01232 Mannitol dehydrogenase Rossmann domain CLQ46_RS25885 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS25885 PF00107 Zinc-binding dehydrogenase CLQ46_RS25890 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS25890 PF07729 FCD domain CLQ46_RS25895 PF07690 Major Facilitator Superfamily CLQ46_RS25900 PF00814 Glycoprotease family CLQ46_RS25900 PF00583 Acetyltransferase (GNAT) family CLQ46_RS25905 PF00583 Acetyltransferase (GNAT) family CLQ46_RS25910 PF01418 Helix-turn-helix domain, rpiR family CLQ46_RS25910 PF01380 SIS domain CLQ46_RS25915 PF01081 KDPG and KHG aldolase CLQ46_RS25920 PF05035 2-keto-3-deoxy-galactonokinase CLQ46_RS25935 PF07969 Amidohydrolase family CLQ46_RS25950 PF02615 Malate/L-lactate dehydrogenase CLQ46_RS25965 PF01047 MarR family CLQ46_RS25975 PF01557 Fumarylacetoacetate (FAA) hydrolase family CLQ46_RS25980 PF01557 Fumarylacetoacetate (FAA) hydrolase family CLQ46_RS25985 PF00171 Aldehyde dehydrogenase family CLQ46_RS25990 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CLQ46_RS25995 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase CLQ46_RS26000 PF01557 Fumarylacetoacetate (FAA) hydrolase family CLQ46_RS26005 PF03328 HpcH/HpaI aldolase/citrate lyase family CLQ46_RS26010 PF07690 Major Facilitator Superfamily CLQ46_RS26015 PF12833 Helix-turn-helix domain CLQ46_RS26020 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CLQ46_RS26020 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CLQ46_RS26025 PF01613 Flavin reductase like domain CLQ46_RS26040 PF02554 Carbon starvation protein CstA CLQ46_RS26040 PF13722 5TM C-terminal transporter carbon starvation CstA CLQ46_RS26045 PF04328 Selenoprotein, putative CLQ46_RS26050 PF07683 Cobalamin synthesis protein cobW C-terminal domain CLQ46_RS26050 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLQ46_RS26060 PF00171 Aldehyde dehydrogenase family CLQ46_RS26065 PF04754 Putative transposase, YhgA-like CLQ46_RS26070 PF12833 Helix-turn-helix domain CLQ46_RS26070 PF02311 AraC-like ligand binding domain CLQ46_RS26080 PF04286 Protein of unknown function (DUF445) CLQ46_RS26085 PF07690 Major Facilitator Superfamily CLQ46_RS26095 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CLQ46_RS26100 PF01869 BadF/BadG/BcrA/BcrD ATPase family CLQ46_RS26105 PF11823 Protein of unknown function (DUF3343) CLQ46_RS26115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ46_RS26115 PF00529 HlyD membrane-fusion protein of T1SS CLQ46_RS26125 PF06568 Domain of unknown function (DUF1127) CLQ46_RS26130 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS26130 PF00155 Aminotransferase class I and II CLQ46_RS26135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CLQ46_RS26140 PF03466 LysR substrate binding domain CLQ46_RS26140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS26145 PF02525 Flavodoxin-like fold CLQ46_RS26150 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS26155 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS26160 PF00005 ABC transporter CLQ46_RS26165 PF13407 Periplasmic binding protein domain CLQ46_RS26170 PF00579 tRNA synthetases class I (W and Y) CLQ46_RS26175 PF13533 Biotin-lipoyl like CLQ46_RS26180 PF00005 ABC transporter CLQ46_RS26220 PF08007 Cupin superfamily protein CLQ46_RS26235 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS26235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS26235 PF00672 HAMP domain CLQ46_RS26240 PF00486 Transcriptional regulatory protein, C terminal CLQ46_RS26240 PF00072 Response regulator receiver domain CLQ46_RS26250 PF02321 Outer membrane efflux protein CLQ46_RS26255 PF11604 Copper binding periplasmic protein CusF CLQ46_RS26260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ46_RS26260 PF00529 HlyD membrane-fusion protein of T1SS CLQ46_RS26265 PF00873 AcrB/AcrD/AcrF family CLQ46_RS26275 PF08212 Lipocalin-like domain CLQ46_RS26280 PF13411 MerR HTH family regulatory protein CLQ46_RS26290 PF00106 short chain dehydrogenase CLQ46_RS26325 PF08349 Protein of unknown function (DUF1722) CLQ46_RS26330 PF02264 LamB porin CLQ46_RS26345 PF04616 Glycosyl hydrolases family 43 CLQ46_RS26345 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CLQ46_RS26375 PF01609 Transposase DDE domain CLQ46_RS26375 PF05598 Transposase domain (DUF772) CLQ46_RS26385 PF13356 Arm DNA-binding domain CLQ46_RS26385 PF00589 Phage integrase family CLQ46_RS26400 PF00484 Carbonic anhydrase CLQ46_RS26405 PF01740 STAS domain CLQ46_RS26405 PF00916 Sulfate permease family CLQ46_RS26410 PF00107 Zinc-binding dehydrogenase CLQ46_RS26410 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS26415 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS26420 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS26425 PF00149 Calcineurin-like phosphoesterase CLQ46_RS26430 PF00005 ABC transporter CLQ46_RS26430 PF17912 MalK OB fold domain CLQ46_RS26435 PF13416 Bacterial extracellular solute-binding protein CLQ46_RS26440 PF01261 Xylose isomerase-like TIM barrel CLQ46_RS26445 PF01261 Xylose isomerase-like TIM barrel CLQ46_RS26450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLQ46_RS26450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ46_RS26455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ46_RS26455 PF00205 Thiamine pyrophosphate enzyme, central domain CLQ46_RS26455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLQ46_RS26460 PF00294 pfkB family carbohydrate kinase CLQ46_RS26465 PF01418 Helix-turn-helix domain, rpiR family CLQ46_RS26465 PF01380 SIS domain CLQ46_RS26465 PF02685 Glucokinase CLQ46_RS26500 PF04962 KduI/IolB family CLQ46_RS26505 PF00171 Aldehyde dehydrogenase family CLQ46_RS26515 PF05872 Bacterial protein of unknown function (DUF853) CLQ46_RS26520 PF03739 Lipopolysaccharide export system permease LptF/LptG CLQ46_RS26525 PF03739 Lipopolysaccharide export system permease LptF/LptG CLQ46_RS26535 PF02789 Cytosol aminopeptidase family, N-terminal domain CLQ46_RS26535 PF00883 Cytosol aminopeptidase family, catalytic domain CLQ46_RS26540 PF04364 DNA polymerase III chi subunit, HolC CLQ46_RS26545 PF10458 Valyl tRNA synthetase tRNA binding arm CLQ46_RS26545 PF00133 tRNA synthetases class I (I, L, M and V) CLQ46_RS26545 PF08264 Anticodon-binding domain of tRNA CLQ46_RS26550 PF00583 Acetyltransferase (GNAT) family CLQ46_RS26555 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CLQ46_RS26560 PF06877 Regulator of ribonuclease activity B CLQ46_RS26565 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLQ46_RS26565 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLQ46_RS26570 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS26570 PF07702 UTRA domain CLQ46_RS26575 PF03606 C4-dicarboxylate anaerobic carrier CLQ46_RS26580 PF01979 Amidohydrolase family CLQ46_RS26600 PF01380 SIS domain CLQ46_RS26605 PF04074 YhcH/YjgK/YiaL CLQ46_RS26620 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLQ46_RS26620 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLQ46_RS26625 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CLQ46_RS26625 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CLQ46_RS26630 PF01042 Endoribonuclease L-PSP CLQ46_RS26635 PF00690 Cation transporter/ATPase, N-terminus CLQ46_RS26635 PF00689 Cation transporting ATPase, C-terminus CLQ46_RS26645 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS26650 PF02378 Phosphotransferase system, EIIC CLQ46_RS26650 PF00367 phosphotransferase system, EIIB CLQ46_RS26655 PF00128 Alpha amylase, catalytic domain CLQ46_RS26655 PF11941 Domain of unknown function (DUF3459) CLQ46_RS26660 PF02378 Phosphotransferase system, EIIC CLQ46_RS26665 PF02056 Family 4 glycosyl hydrolase CLQ46_RS26665 PF11975 Family 4 glycosyl hydrolase C-terminal domain CLQ46_RS26670 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ46_RS26680 PF03477 ATP cone domain CLQ46_RS26680 PF13597 Anaerobic ribonucleoside-triphosphate reductase CLQ46_RS26690 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CLQ46_RS26695 PF04221 RelB antitoxin CLQ46_RS26700 PF08279 HTH domain CLQ46_RS26700 PF00874 PRD domain CLQ46_RS26700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ46_RS26700 PF05043 Mga helix-turn-helix domain CLQ46_RS26705 PF10282 Lactonase, 7-bladed beta-propeller CLQ46_RS26710 PF07071 KDGP aldolase CLQ46_RS26715 PF03841 L-seryl-tRNA selenium transferase CLQ46_RS26720 PF01979 Amidohydrolase family CLQ46_RS26750 PF07361 Cytochrome b562 CLQ46_RS26755 PF01523 Putative modulator of DNA gyrase CLQ46_RS26760 PF04751 Protein of unknown function (DUF615) CLQ46_RS26775 PF01225 Mur ligase family, catalytic domain CLQ46_RS26775 PF02875 Mur ligase family, glutamate ligase domain CLQ46_RS26775 PF08245 Mur ligase middle domain CLQ46_RS26780 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CLQ46_RS26785 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS26790 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS26795 PF00005 ABC transporter CLQ46_RS26800 PF13407 Periplasmic binding protein domain CLQ46_RS26805 PF00719 Inorganic pyrophosphatase CLQ46_RS26820 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CLQ46_RS26825 PF04357 TamB, inner membrane protein subunit of TAM complex CLQ46_RS26830 PF01103 Surface antigen CLQ46_RS26830 PF07244 Surface antigen variable number repeat CLQ46_RS26830 PF17243 POTRA domain TamA domain 1 CLQ46_RS26835 PF01625 Peptide methionine sulfoxide reductase CLQ46_RS26840 PF03471 Transporter associated domain CLQ46_RS26840 PF00571 CBS domain CLQ46_RS26840 PF01595 Cyclin M transmembrane N-terminal domain CLQ46_RS26850 PF06526 Protein of unknown function (DUF1107) CLQ46_RS26855 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CLQ46_RS26860 PF00459 Inositol monophosphatase family CLQ46_RS26865 PF00149 Calcineurin-like phosphoesterase CLQ46_RS26865 PF02872 5'-nucleotidase, C-terminal domain CLQ46_RS26870 PF01638 HxlR-like helix-turn-helix CLQ46_RS26875 PF05368 NmrA-like family CLQ46_RS26880 PF12833 Helix-turn-helix domain CLQ46_RS26885 PF00892 EamA-like transporter family CLQ46_RS26890 PF01814 Hemerythrin HHE cation binding domain CLQ46_RS26890 PF04405 Domain of Unknown function (DUF542) CLQ46_RS26895 PF00324 Amino acid permease CLQ46_RS26900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CLQ46_RS26900 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CLQ46_RS26905 PF08525 Opacity-associated protein A N-terminal motif CLQ46_RS26905 PF04225 Opacity-associated protein A LysM-like domain CLQ46_RS26910 PF01281 Ribosomal protein L9, N-terminal domain CLQ46_RS26910 PF03948 Ribosomal protein L9, C-terminal domain CLQ46_RS26915 PF01084 Ribosomal protein S18 CLQ46_RS26920 PF00436 Single-strand binding protein family CLQ46_RS26925 PF01250 Ribosomal protein S6 CLQ46_RS26930 PF07338 Protein of unknown function (DUF1471) CLQ46_RS26935 PF07690 Major Facilitator Superfamily CLQ46_RS26940 PF00596 Class II Aldolase and Adducin N-terminal domain CLQ46_RS26945 PF01261 Xylose isomerase-like TIM barrel CLQ46_RS26950 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CLQ46_RS26955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ46_RS26960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ46_RS26965 PF03611 PTS system sugar-specific permease component CLQ46_RS26975 PF08220 DeoR-like helix-turn-helix domain CLQ46_RS26975 PF00455 DeoR C terminal sensor domain CLQ46_RS26980 PF00326 Prolyl oligopeptidase family CLQ46_RS26985 PF07338 Protein of unknown function (DUF1471) CLQ46_RS26990 PF07338 Protein of unknown function (DUF1471) CLQ46_RS26995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CLQ46_RS26995 PF18158 Adaptive response protein AidB N-terminal domain CLQ46_RS26995 PF02770 Acyl-CoA dehydrogenase, middle domain CLQ46_RS27000 PF00588 SpoU rRNA Methylase family CLQ46_RS27000 PF08032 RNA 2'-O ribose methyltransferase substrate binding CLQ46_RS27005 PF17876 Cold shock domain CLQ46_RS27005 PF00773 RNB domain CLQ46_RS27005 PF00575 S1 RNA binding domain CLQ46_RS27005 PF08461 Ribonuclease R winged-helix domain CLQ46_RS27005 PF08206 Ribonuclease B OB domain CLQ46_RS27010 PF02082 Transcriptional regulator CLQ46_RS27015 PF00709 Adenylosuccinate synthetase CLQ46_RS27020 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CLQ46_RS27030 PF01145 SPFH domain / Band 7 family CLQ46_RS27035 PF12221 Bacterial membrane protein N terminal CLQ46_RS27035 PF01145 SPFH domain / Band 7 family CLQ46_RS27040 PF01926 50S ribosome-binding GTPase CLQ46_RS27040 PF13167 GTP-binding GTPase N-terminal CLQ46_RS27040 PF16360 GTP-binding GTPase Middle Region CLQ46_RS27045 PF17209 Hfq protein CLQ46_RS27055 PF08676 MutL C terminal dimerisation domain CLQ46_RS27055 PF01119 DNA mismatch repair protein, C-terminal domain CLQ46_RS27060 PF01520 N-acetylmuramoyl-L-alanine amidase CLQ46_RS27065 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CLQ46_RS27070 PF03853 YjeF-related protein N-terminus CLQ46_RS27070 PF01256 Carbohydrate kinase CLQ46_RS27075 PF08331 Domain of unknown function (DUF1730) CLQ46_RS27090 PF13614 AAA domain CLQ46_RS27125 PF00436 Single-strand binding protein family CLQ46_RS27130 PF01131 DNA topoisomerase CLQ46_RS27130 PF01751 Toprim domain CLQ46_RS27135 PF00145 C-5 cytosine-specific DNA methylase CLQ46_RS27325 PF04002 RadC-like JAB domain CLQ46_RS27355 PF01526 Tn3 transposase DDE domain CLQ46_RS27355 PF13700 Domain of unknown function (DUF4158) CLQ46_RS27365 PF13610 DDE domain CLQ46_RS27385 PF00809 Pterin binding enzyme CLQ46_RS27390 PF00893 Small Multidrug Resistance protein CLQ46_RS27395 PF13427 Domain of unknown function (DUF4111) CLQ46_RS27400 PF07690 Major Facilitator Superfamily CLQ46_RS27405 PF10706 Aminoglycoside-2''-adenylyltransferase CLQ46_RS27410 PF00893 Small Multidrug Resistance protein CLQ46_RS27415 PF00589 Phage integrase family CLQ46_RS27415 PF13495 Phage integrase, N-terminal SAM-like domain CLQ46_RS27420 PF13610 DDE domain CLQ46_RS27430 PF01636 Phosphotransferase enzyme family CLQ46_RS27435 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase CLQ46_RS27465 PF17755 UvrA DNA-binding domain CLQ46_RS27470 PF13462 Thioredoxin CLQ46_RS27470 PF06965 Na+/H+ antiporter 1 CLQ46_RS27475 PF00004 ATPase family associated with various cellular activities (AAA) CLQ46_RS27475 PF16193 AAA C-terminal domain CLQ46_RS27475 PF12002 MgsA AAA+ ATPase C terminal CLQ46_RS27480 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ46_RS27485 PF00756 Putative esterase CLQ46_RS27500 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS27500 PF00107 Zinc-binding dehydrogenase CLQ46_RS27505 PF02583 Metal-sensitive transcriptional repressor CLQ46_RS27530 PF02151 UvrB/uvrC motif CLQ46_RS27530 PF17757 UvrB interaction domain CLQ46_RS27530 PF04851 Type III restriction enzyme, res subunit CLQ46_RS27530 PF12344 Ultra-violet resistance protein B CLQ46_RS27530 PF00271 Helicase conserved C-terminal domain CLQ46_RS27550 PF03050 Transposase IS66 family CLQ46_RS27550 PF13817 IS66 C-terminal element CLQ46_RS27550 PF13007 Transposase C of IS166 homeodomain CLQ46_RS27550 PF13005 zinc-finger binding domain of transposase IS66 CLQ46_RS27575 PF03466 LysR substrate binding domain CLQ46_RS27575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS27580 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS27590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS27590 PF03466 LysR substrate binding domain CLQ46_RS27605 PF04261 Dyp-type peroxidase family CLQ46_RS27610 PF00589 Phage integrase family CLQ46_RS27610 PF13356 Arm DNA-binding domain CLQ46_RS27635 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ46_RS27640 PF00929 Exonuclease CLQ46_RS27650 PF03193 RsgA GTPase CLQ46_RS27655 PF02666 Phosphatidylserine decarboxylase CLQ46_RS27660 PF12795 Mechanosensitive ion channel porin domain CLQ46_RS27660 PF00924 Mechanosensitive ion channel CLQ46_RS27660 PF12794 Mechanosensitive ion channel inner membrane domain 1 CLQ46_RS27665 PF13520 Amino acid permease CLQ46_RS27670 PF00152 tRNA synthetases class II (D, K and N) CLQ46_RS27675 PF00890 FAD binding domain CLQ46_RS27675 PF02910 Fumarate reductase flavoprotein C-term CLQ46_RS27680 PF13183 4Fe-4S dicluster domain CLQ46_RS27680 PF13085 2Fe-2S iron-sulfur cluster binding domain CLQ46_RS27685 PF02300 Fumarate reductase subunit C CLQ46_RS27690 PF02313 Fumarate reductase subunit D CLQ46_RS27695 PF08212 Lipocalin-like domain CLQ46_RS27700 PF00893 Small Multidrug Resistance protein CLQ46_RS27705 PF08085 Entericidin EcnA/B family CLQ46_RS27715 PF09285 Elongation factor P, C-terminal CLQ46_RS27715 PF08207 Elongation factor P (EF-P) KOW-like domain CLQ46_RS27715 PF01132 Elongation factor P (EF-P) OB domain CLQ46_RS27720 PF04055 Radical SAM superfamily CLQ46_RS27735 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CLQ46_RS27735 PF02753 Pili assembly chaperone PapD, C-terminal domain CLQ46_RS27740 PF13953 PapC C-terminal domain CLQ46_RS27740 PF13954 PapC N-terminal domain CLQ46_RS27740 PF00577 Outer membrane usher protein CLQ46_RS27760 PF00529 HlyD membrane-fusion protein of T1SS CLQ46_RS27760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ46_RS27765 PF00005 ABC transporter CLQ46_RS27765 PF00664 ABC transporter transmembrane region CLQ46_RS27765 PF03412 Peptidase C39 family CLQ46_RS27775 PF13698 Domain of unknown function (DUF4156) CLQ46_RS27780 PF00118 TCP-1/cpn60 chaperonin family CLQ46_RS27785 PF00166 Chaperonin 10 Kd subunit CLQ46_RS27790 PF13520 Amino acid permease CLQ46_RS27795 PF04186 FxsA cytoplasmic membrane protein CLQ46_RS27805 PF10415 Fumarase C C-terminus CLQ46_RS27805 PF00206 Lyase CLQ46_RS27810 PF03605 Anaerobic c4-dicarboxylate membrane transporter CLQ46_RS27815 PF03091 CutA1 divalent ion tolerance protein CLQ46_RS27820 PF02683 Cytochrome C biogenesis protein transmembrane region CLQ46_RS27820 PF11412 Disulphide bond corrector protein DsbC CLQ46_RS27860 PF01522 Polysaccharide deacetylase CLQ46_RS27860 PF14883 Hypothetical glycosyl hydrolase family 13 CLQ46_RS27865 PF00535 Glycosyl transferase family 2 CLQ46_RS27885 PF03741 Integral membrane protein TerC family CLQ46_RS27890 PF01556 DnaJ C terminal domain CLQ46_RS27890 PF00226 DnaJ domain CLQ46_RS27910 PF06406 StbA protein CLQ46_RS27920 PF11975 Family 4 glycosyl hydrolase C-terminal domain CLQ46_RS27920 PF02056 Family 4 glycosyl hydrolase CLQ46_RS27930 PF12833 Helix-turn-helix domain CLQ46_RS27935 PF00083 Sugar (and other) transporter CLQ46_RS27935 PF08946 Osmosensory transporter coiled coil CLQ46_RS27945 PF08274 PhnA Zinc-Ribbon CLQ46_RS27945 PF03831 PhnA domain CLQ46_RS27950 PF06983 3-demethylubiquinone-9 3-methyltransferase CLQ46_RS27955 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS27955 PF07702 UTRA domain CLQ46_RS27960 PF06754 Phosphonate metabolism protein PhnG CLQ46_RS27965 PF05845 Bacterial phosphonate metabolism protein (PhnH) CLQ46_RS27970 PF05861 Bacterial phosphonate metabolism protein (PhnI) CLQ46_RS27975 PF06007 Phosphonate metabolism protein PhnJ CLQ46_RS27980 PF00005 ABC transporter CLQ46_RS27985 PF00005 ABC transporter CLQ46_RS27990 PF07969 Amidohydrolase family CLQ46_RS28000 PF12706 Beta-lactamase superfamily domain CLQ46_RS28010 PF00072 Response regulator receiver domain CLQ46_RS28010 PF13426 PAS domain CLQ46_RS28010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS28015 PF00005 ABC transporter CLQ46_RS28020 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS28025 PF13407 Periplasmic binding protein domain CLQ46_RS28045 PF00072 Response regulator receiver domain CLQ46_RS28045 PF00486 Transcriptional regulatory protein, C terminal CLQ46_RS28055 PF08238 Sel1 repeat CLQ46_RS28060 PF00375 Sodium:dicarboxylate symporter family CLQ46_RS28070 PF16177 Acetyl-coenzyme A synthetase N-terminus CLQ46_RS28070 PF13193 AMP-binding enzyme C-terminal domain CLQ46_RS28070 PF00501 AMP-binding enzyme CLQ46_RS28080 PF04341 Protein of unknown function, DUF485 CLQ46_RS28085 PF00474 Sodium:solute symporter family CLQ46_RS28100 PF13953 PapC C-terminal domain CLQ46_RS28100 PF13954 PapC N-terminal domain CLQ46_RS28100 PF00577 Outer membrane usher protein CLQ46_RS28105 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CLQ46_RS28105 PF02753 Pili assembly chaperone PapD, C-terminal domain CLQ46_RS28110 PF00419 Fimbrial protein CLQ46_RS28115 PF04172 LrgB-like family CLQ46_RS28120 PF03788 LrgA family CLQ46_RS28125 PF03466 LysR substrate binding domain CLQ46_RS28125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS28130 PF00999 Sodium/hydrogen exchanger family CLQ46_RS28135 PF00860 Permease family CLQ46_RS28140 PF02798 Glutathione S-transferase, N-terminal domain CLQ46_RS28140 PF00043 Glutathione S-transferase, C-terminal domain CLQ46_RS28145 PF09278 MerR, DNA binding CLQ46_RS28145 PF00376 MerR family regulatory protein CLQ46_RS28150 PF12833 Helix-turn-helix domain CLQ46_RS28155 PF12792 CSS motif domain associated with EAL CLQ46_RS28155 PF00563 EAL domain CLQ46_RS28165 PF15940 Family of unknown function CLQ46_RS28170 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS28185 PF00005 ABC transporter CLQ46_RS28185 PF08402 TOBE domain CLQ46_RS28190 PF12706 Beta-lactamase superfamily domain CLQ46_RS28190 PF00753 Metallo-beta-lactamase superfamily CLQ46_RS28195 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS28200 PF00459 Inositol monophosphatase family CLQ46_RS28215 PF07244 Surface antigen variable number repeat CLQ46_RS28215 PF01103 Surface antigen CLQ46_RS28225 PF07519 Tannase and feruloyl esterase CLQ46_RS28230 PF12833 Helix-turn-helix domain CLQ46_RS28235 PF00593 TonB dependent receptor CLQ46_RS28235 PF07715 TonB-dependent Receptor Plug Domain CLQ46_RS28240 PF01464 Transglycosylase SLT domain CLQ46_RS28245 PF00436 Single-strand binding protein family CLQ46_RS28255 PF17755 UvrA DNA-binding domain CLQ46_RS28255 PF00005 ABC transporter CLQ46_RS28255 PF17760 UvrA interaction domain CLQ46_RS28260 PF04237 YjbR CLQ46_RS28265 PF01894 Uncharacterised protein family UPF0047 CLQ46_RS28270 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CLQ46_RS28275 PF00155 Aminotransferase class I and II CLQ46_RS28280 PF00842 Alanine racemase, C-terminal domain CLQ46_RS28280 PF01168 Alanine racemase, N-terminal domain CLQ46_RS28285 PF00772 DnaB-like helicase N terminal domain CLQ46_RS28285 PF03796 DnaB-like helicase C terminal domain CLQ46_RS28290 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS28290 PF00107 Zinc-binding dehydrogenase CLQ46_RS28295 PF09583 Phage shock protein G (Phageshock_PspG) CLQ46_RS28300 PF01207 Dihydrouridine synthase (Dus) CLQ46_RS28310 PF01475 Ferric uptake regulator family CLQ46_RS28315 PF05532 CsbD-like CLQ46_RS28320 PF01554 MatE CLQ46_RS28325 PF01726 LexA DNA binding domain CLQ46_RS28325 PF00717 Peptidase S24-like CLQ46_RS28330 PF01219 Prokaryotic diacylglycerol kinase CLQ46_RS28335 PF01553 Acyltransferase CLQ46_RS28340 PF01040 UbiA prenyltransferase family CLQ46_RS28345 PF04345 Chorismate lyase CLQ46_RS28350 PF07148 Maltose operon periplasmic protein precursor (MalM) CLQ46_RS28355 PF02264 LamB porin CLQ46_RS28360 PF17912 MalK OB fold domain CLQ46_RS28360 PF00005 ABC transporter CLQ46_RS28370 PF01547 Bacterial extracellular solute-binding protein CLQ46_RS28375 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS28375 PF14785 Maltose transport system permease protein MalF P2 domain CLQ46_RS28380 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS28385 PF06146 Phosphate-starvation-inducible E CLQ46_RS28390 PF03313 Serine dehydratase alpha chain CLQ46_RS28405 PF01042 Endoribonuclease L-PSP CLQ46_RS28415 PF00132 Bacterial transferase hexapeptide (six repeats) CLQ46_RS28415 PF14602 Hexapeptide repeat of succinyl-transferase CLQ46_RS28415 PF12804 MobA-like NTP transferase domain CLQ46_RS28420 PF00342 Phosphoglucose isomerase CLQ46_RS28435 PF00696 Amino acid kinase family CLQ46_RS28435 PF01842 ACT domain CLQ46_RS28440 PF01758 Sodium Bile acid symporter family CLQ46_RS28445 PF11656 YjbD family (DUF3811) CLQ46_RS28450 PF01479 S4 domain CLQ46_RS28450 PF00849 RNA pseudouridylate synthase CLQ46_RS28455 PF04198 Putative sugar-binding domain CLQ46_RS28455 PF13936 Helix-turn-helix domain CLQ46_RS28460 PF00106 short chain dehydrogenase CLQ46_RS28465 PF03610 PTS system fructose IIA component CLQ46_RS28470 PF03830 PTS system sorbose subfamily IIB component CLQ46_RS28475 PF03609 PTS system sorbose-specific iic component CLQ46_RS28480 PF03613 PTS system mannose/fructose/sorbose family IID component CLQ46_RS28485 PF08240 Alcohol dehydrogenase GroES-like domain CLQ46_RS28485 PF00107 Zinc-binding dehydrogenase CLQ46_RS28490 PF08501 Shikimate dehydrogenase substrate binding domain CLQ46_RS28495 PF02690 Na+/Pi-cotransporter CLQ46_RS28500 PF02310 B12 binding domain CLQ46_RS28500 PF02607 B12 binding domain CLQ46_RS28500 PF02965 Vitamin B12 dependent methionine synthase, activation domain CLQ46_RS28500 PF00809 Pterin binding enzyme CLQ46_RS28500 PF02574 Homocysteine S-methyltransferase CLQ46_RS28505 PF09339 IclR helix-turn-helix domain CLQ46_RS28505 PF01614 Bacterial transcriptional regulator CLQ46_RS28510 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CLQ46_RS28515 PF00463 Isocitrate lyase family CLQ46_RS28520 PF01274 Malate synthase CLQ46_RS28525 PF04204 Homoserine O-succinyltransferase CLQ46_RS28530 PF13673 Acetyltransferase (GNAT) domain CLQ46_RS28565 PF01808 AICARFT/IMPCHase bienzyme CLQ46_RS28565 PF02142 MGS-like domain CLQ46_RS28570 PF02844 Phosphoribosylglycinamide synthetase, N domain CLQ46_RS28570 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CLQ46_RS28570 PF02843 Phosphoribosylglycinamide synthetase, C domain CLQ46_RS28575 PF02954 Bacterial regulatory protein, Fis family CLQ46_RS28575 PF00072 Response regulator receiver domain CLQ46_RS28575 PF00158 Sigma-54 interaction domain CLQ46_RS28580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS28580 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS28585 PF13801 Heavy-metal resistance CLQ46_RS28590 PF07356 Protein of unknown function (DUF1481) CLQ46_RS28595 PF00216 Bacterial DNA-binding protein CLQ46_RS28600 PF04222 Protein of unknown function (DUF416) CLQ46_RS28605 PF04493 Endonuclease V CLQ46_RS28610 PF01208 Uroporphyrinogen decarboxylase (URO-D) CLQ46_RS28615 PF09297 NADH pyrophosphatase zinc ribbon domain CLQ46_RS28615 PF00293 NUDIX domain CLQ46_RS28620 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CLQ46_RS28625 PF13667 ThiC-associated domain CLQ46_RS28625 PF01964 Radical SAM ThiC family CLQ46_RS28630 PF02581 Thiamine monophosphate synthase CLQ46_RS28635 PF00899 ThiF family CLQ46_RS28640 PF02597 ThiS family CLQ46_RS28645 PF05690 Thiazole biosynthesis protein ThiG CLQ46_RS28650 PF06968 Biotin and Thiamin Synthesis associated domain CLQ46_RS28650 PF04055 Radical SAM superfamily CLQ46_RS28660 PF00990 Diguanylate cyclase, GGDEF domain CLQ46_RS28665 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ46_RS28670 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CLQ46_RS28675 PF03605 Anaerobic c4-dicarboxylate membrane transporter CLQ46_RS28680 PF04998 RNA polymerase Rpb1, domain 5 CLQ46_RS28680 PF04997 RNA polymerase Rpb1, domain 1 CLQ46_RS28680 PF04983 RNA polymerase Rpb1, domain 3 CLQ46_RS28680 PF05000 RNA polymerase Rpb1, domain 4 CLQ46_RS28680 PF00623 RNA polymerase Rpb1, domain 2 CLQ46_RS28685 PF04561 RNA polymerase Rpb2, domain 2 CLQ46_RS28685 PF04560 RNA polymerase Rpb2, domain 7 CLQ46_RS28685 PF04563 RNA polymerase beta subunit CLQ46_RS28685 PF00562 RNA polymerase Rpb2, domain 6 CLQ46_RS28685 PF04565 RNA polymerase Rpb2, domain 3 CLQ46_RS28685 PF10385 RNA polymerase beta subunit external 1 domain CLQ46_RS28690 PF00542 Ribosomal protein L7/L12 C-terminal domain CLQ46_RS28690 PF16320 Ribosomal protein L7/L12 dimerisation domain CLQ46_RS28695 PF00466 Ribosomal protein L10 CLQ46_RS28705 PF00687 Ribosomal protein L1p/L10e family CLQ46_RS28710 PF00298 Ribosomal protein L11, RNA binding domain CLQ46_RS28710 PF03946 Ribosomal protein L11, N-terminal domain CLQ46_RS28715 PF02357 Transcription termination factor nusG CLQ46_RS28715 PF00467 KOW motif CLQ46_RS28720 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CLQ46_RS28730 PF03143 Elongation factor Tu C-terminal domain CLQ46_RS28730 PF00009 Elongation factor Tu GTP binding domain CLQ46_RS28730 PF03144 Elongation factor Tu domain 2 CLQ46_RS28755 PF00485 Phosphoribulokinase / Uridine kinase family CLQ46_RS28760 PF08279 HTH domain CLQ46_RS28760 PF03099 Biotin/lipoate A/B protein ligase family CLQ46_RS28760 PF02237 Biotin protein ligase C terminal domain CLQ46_RS28765 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CLQ46_RS28765 PF01565 FAD binding domain CLQ46_RS28800 PF12724 Flavodoxin domain CLQ46_RS28805 PF02386 Cation transport protein CLQ46_RS28810 PF01205 Uncharacterized protein family UPF0029 CLQ46_RS28810 PF09186 Domain of unknown function (DUF1949) CLQ46_RS28815 PF00557 Metallopeptidase family M24 CLQ46_RS28825 PF00378 Enoyl-CoA hydratase/isomerase CLQ46_RS28825 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CLQ46_RS28825 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CLQ46_RS28830 PF02803 Thiolase, C-terminal domain CLQ46_RS28830 PF00108 Thiolase, N-terminal domain CLQ46_RS28835 PF00175 Oxidoreductase NAD-binding domain CLQ46_RS28835 PF00970 Oxidoreductase FAD-binding domain CLQ46_RS28840 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CLQ46_RS28845 PF02357 Transcription termination factor nusG CLQ46_RS28850 PF01026 TatD related DNase CLQ46_RS28855 PF00902 Sec-independent protein translocase protein (TatC) CLQ46_RS28865 PF02416 mttA/Hcf106 family CLQ46_RS28870 PF03109 ABC1 family CLQ46_RS28875 PF02036 SCP-2 sterol transfer family CLQ46_RS28880 PF01209 ubiE/COQ5 methyltransferase family CLQ46_RS28885 PF02646 RmuC family CLQ46_RS28890 PF01048 Phosphorylase superfamily CLQ46_RS28895 PF01738 Dienelactone hydrolase family CLQ46_RS28900 PF01717 Cobalamin-independent synthase, Catalytic domain CLQ46_RS28900 PF08267 Cobalamin-independent synthase, N-terminal domain CLQ46_RS28905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS28905 PF03466 LysR substrate binding domain CLQ46_RS28910 PF00892 EamA-like transporter family CLQ46_RS28920 PF12146 Serine aminopeptidase, S33 CLQ46_RS28925 PF01810 LysE type translocator CLQ46_RS28930 PF04754 Putative transposase, YhgA-like CLQ46_RS28935 PF01810 LysE type translocator CLQ46_RS28940 PF00271 Helicase conserved C-terminal domain CLQ46_RS28940 PF00570 HRDC domain CLQ46_RS28940 PF16124 RecQ zinc-binding CLQ46_RS28940 PF00270 DEAD/DEAH box helicase CLQ46_RS28940 PF09382 RQC domain CLQ46_RS28945 PF02253 Phospholipase A1 CLQ46_RS28950 PF03061 Thioesterase superfamily CLQ46_RS28955 PF00892 EamA-like transporter family CLQ46_RS28960 PF01544 CorA-like Mg2+ transporter protein CLQ46_RS28970 PF13361 UvrD-like helicase C-terminal domain CLQ46_RS28970 PF00580 UvrD/REP helicase N-terminal domain CLQ46_RS28975 PF13419 Haloacid dehalogenase-like hydrolase CLQ46_RS28980 PF00589 Phage integrase family CLQ46_RS28980 PF02899 Phage integrase, N-terminal SAM-like domain CLQ46_RS28985 PF04340 Protein of unknown function, DUF484 CLQ46_RS28990 PF01678 Diaminopimelate epimerase CLQ46_RS28995 PF13627 Prokaryotic lipoprotein-attachment site CLQ46_RS29000 PF01491 Frataxin-like domain CLQ46_RS29005 PF01295 Adenylate cyclase, class-I CLQ46_RS29005 PF12633 Adenylate cyclase NT domain CLQ46_RS29010 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CLQ46_RS29010 PF03900 Porphobilinogen deaminase, C-terminal domain CLQ46_RS29015 PF02602 Uroporphyrinogen-III synthase HemD CLQ46_RS29020 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CLQ46_RS29025 PF07219 HemY protein N-terminus CLQ46_RS29025 PF07719 Tetratricopeptide repeat CLQ46_RS29050 PF00324 Amino acid permease CLQ46_RS29055 PF03808 Glycosyl transferase WecB/TagA/CpsF family CLQ46_RS29060 PF06899 WzyE protein, O-antigen assembly polymerase CLQ46_RS29065 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CLQ46_RS29070 PF01943 Polysaccharide biosynthesis protein CLQ46_RS29075 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLQ46_RS29085 PF00483 Nucleotidyl transferase CLQ46_RS29090 PF16363 GDP-mannose 4,6 dehydratase CLQ46_RS29095 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CLQ46_RS29095 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CLQ46_RS29095 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CLQ46_RS29100 PF02350 UDP-N-acetylglucosamine 2-epimerase CLQ46_RS29105 PF02706 Chain length determinant protein CLQ46_RS29110 PF00953 Glycosyl transferase family 4 CLQ46_RS29115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLQ46_RS29115 PF07497 Rho termination factor, RNA-binding domain CLQ46_RS29115 PF07498 Rho termination factor, N-terminal domain CLQ46_RS29125 PF00085 Thioredoxin CLQ46_RS29130 PF00270 DEAD/DEAH box helicase CLQ46_RS29130 PF00271 Helicase conserved C-terminal domain CLQ46_RS29140 PF02541 Ppx/GppA phosphatase family CLQ46_RS29145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS29145 PF03466 LysR substrate binding domain CLQ46_RS29155 PF04474 Protein of unknown function (DUF554) CLQ46_RS29160 PF00580 UvrD/REP helicase N-terminal domain CLQ46_RS29160 PF13361 UvrD-like helicase C-terminal domain CLQ46_RS29175 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CLQ46_RS29175 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CLQ46_RS29180 PF03466 LysR substrate binding domain CLQ46_RS29180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS29185 PF00585 C-terminal regulatory domain of Threonine dehydratase CLQ46_RS29185 PF00291 Pyridoxal-phosphate dependent enzyme CLQ46_RS29190 PF00920 Dehydratase family CLQ46_RS29195 PF01063 Amino-transferase class IV CLQ46_RS29205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ46_RS29205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLQ46_RS29205 PF00205 Thiamine pyrophosphate enzyme, central domain CLQ46_RS29210 PF08046 IlvGEDA operon leader peptide CLQ46_RS29215 PF01078 Magnesium chelatase, subunit ChlI CLQ46_RS29215 PF13335 Magnesium chelatase, subunit ChlI C-terminal CLQ46_RS29220 PF04219 Protein of unknown function, DUF CLQ46_RS29225 PF03466 LysR substrate binding domain CLQ46_RS29225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS29265 PF01177 Asp/Glu/Hydantoin racemase CLQ46_RS29270 PF00593 TonB dependent receptor CLQ46_RS29270 PF07715 TonB-dependent Receptor Plug Domain CLQ46_RS29275 PF05958 tRNA (Uracil-5-)-methyltransferase CLQ46_RS29280 PF07226 Protein of unknown function (DUF1422) CLQ46_RS29285 PF00440 Bacterial regulatory proteins, tetR family CLQ46_RS29290 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ46_RS29290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLQ46_RS29295 PF03466 LysR substrate binding domain CLQ46_RS29295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS29305 PF00206 Lyase CLQ46_RS29305 PF14698 Argininosuccinate lyase C-terminal CLQ46_RS29315 PF00696 Amino acid kinase family CLQ46_RS29320 PF02774 Semialdehyde dehydrogenase, dimerisation domain CLQ46_RS29320 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLQ46_RS29325 PF01546 Peptidase family M20/M25/M40 CLQ46_RS29325 PF07687 Peptidase dimerisation domain CLQ46_RS29330 PF00311 Phosphoenolpyruvate carboxylase CLQ46_RS29335 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CLQ46_RS29340 PF12833 Helix-turn-helix domain CLQ46_RS29345 PF00923 Transaldolase/Fructose-6-phosphate aldolase CLQ46_RS29350 PF00465 Iron-containing alcohol dehydrogenase CLQ46_RS29355 PF00892 EamA-like transporter family CLQ46_RS29360 PF02219 Methylenetetrahydrofolate reductase CLQ46_RS29365 PF03466 LysR substrate binding domain CLQ46_RS29365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS29370 PF02627 Carboxymuconolactone decarboxylase family CLQ46_RS29375 PF00149 Calcineurin-like phosphoesterase CLQ46_RS29375 PF02872 5'-nucleotidase, C-terminal domain CLQ46_RS29385 PF00742 Homoserine dehydrogenase CLQ46_RS29385 PF00696 Amino acid kinase family CLQ46_RS29385 PF03447 Homoserine dehydrogenase, NAD binding domain CLQ46_RS29390 PF01053 Cys/Met metabolism PLP-dependent enzyme CLQ46_RS29395 PF01340 Met Apo-repressor, MetJ CLQ46_RS29400 PF01197 Ribosomal protein L31 CLQ46_RS29405 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CLQ46_RS29405 PF17764 3′ DNA-binding domain (3′BD) CLQ46_RS29405 PF18074 Primosomal protein N C-terminal domain CLQ46_RS29405 PF00271 Helicase conserved C-terminal domain CLQ46_RS29405 PF00270 DEAD/DEAH box helicase CLQ46_RS29410 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS29415 PF05036 Sporulation related domain CLQ46_RS29420 PF00227 Proteasome subunit CLQ46_RS29425 PF10431 C-terminal, D2-small domain, of ClpB protein CLQ46_RS29425 PF07724 AAA domain (Cdc48 subfamily) CLQ46_RS29425 PF00004 ATPase family associated with various cellular activities (AAA) CLQ46_RS29430 PF01040 UbiA prenyltransferase family CLQ46_RS29435 PF03737 Aldolase/RraA CLQ46_RS29440 PF00365 Phosphofructokinase CLQ46_RS29445 PF01545 Cation efflux family CLQ46_RS29445 PF16916 Dimerisation domain of Zinc Transporter CLQ46_RS29450 PF07813 LTXXQ motif family protein CLQ46_RS29455 PF00486 Transcriptional regulatory protein, C terminal CLQ46_RS29455 PF00072 Response regulator receiver domain CLQ46_RS29460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS29460 PF00672 HAMP domain CLQ46_RS29460 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS29460 PF16527 Two-component sensor protein CpxA, periplasmic domain CLQ46_RS29465 PF03475 3-alpha domain CLQ46_RS29465 PF03473 MOSC domain CLQ46_RS29470 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CLQ46_RS29470 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CLQ46_RS29475 PF06379 L-rhamnose-proton symport protein (RhaT) CLQ46_RS29480 PF12833 Helix-turn-helix domain CLQ46_RS29480 PF02311 AraC-like ligand binding domain CLQ46_RS29485 PF02311 AraC-like ligand binding domain CLQ46_RS29485 PF12833 Helix-turn-helix domain CLQ46_RS29495 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ46_RS29495 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ46_RS29500 PF06134 L-rhamnose isomerase (RhaA) CLQ46_RS29505 PF00596 Class II Aldolase and Adducin N-terminal domain CLQ46_RS29510 PF13407 Periplasmic binding protein domain CLQ46_RS29515 PF00005 ABC transporter CLQ46_RS29520 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS29525 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS29530 PF00465 Iron-containing alcohol dehydrogenase CLQ46_RS29535 PF05336 L-rhamnose mutarotase CLQ46_RS29540 PF01306 LacY proton/sugar symporter CLQ46_RS29545 PF16875 Glycosyl hydrolase family 36 N-terminal domain CLQ46_RS29545 PF16874 Glycosyl hydrolase family 36 C-terminal domain CLQ46_RS29550 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS29550 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CLQ46_RS29575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ46_RS29585 PF01116 Fructose-bisphosphate aldolase class-II CLQ46_RS29590 PF03611 PTS system sugar-specific permease component CLQ46_RS29600 PF00365 Phosphofructokinase CLQ46_RS29610 PF02634 FdhD/NarQ family CLQ46_RS29620 PF01568 Molydopterin dinucleotide binding domain CLQ46_RS29620 PF00384 Molybdopterin oxidoreductase CLQ46_RS29620 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLQ46_RS29625 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLQ46_RS29625 PF00384 Molybdopterin oxidoreductase CLQ46_RS29625 PF01568 Molydopterin dinucleotide binding domain CLQ46_RS29630 PF09163 Formate dehydrogenase N, transmembrane CLQ46_RS29630 PF13247 4Fe-4S dicluster domain CLQ46_RS29635 PF01292 Prokaryotic cytochrome b561 CLQ46_RS29640 PF04216 Protein involved in formate dehydrogenase formation CLQ46_RS29655 PF07859 alpha/beta hydrolase fold CLQ46_RS29660 PF00583 Acetyltransferase (GNAT) family CLQ46_RS29660 PF09500 Putative thioesterase (yiiD_Cterm) CLQ46_RS29665 PF02580 D-Tyr-tRNA(Tyr) deacylase CLQ46_RS29670 PF03631 Virulence factor BrkB CLQ46_RS29675 PF13419 Haloacid dehalogenase-like hydrolase CLQ46_RS29680 PF00679 Elongation factor G C-terminus CLQ46_RS29680 PF00009 Elongation factor Tu GTP binding domain CLQ46_RS29680 PF03144 Elongation factor Tu domain 2 CLQ46_RS29690 PF00120 Glutamine synthetase, catalytic domain CLQ46_RS29690 PF03951 Glutamine synthetase, beta-Grasp domain CLQ46_RS29695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ46_RS29695 PF00989 PAS fold CLQ46_RS29695 PF00512 His Kinase A (phospho-acceptor) domain CLQ46_RS29700 PF00072 Response regulator receiver domain CLQ46_RS29700 PF00158 Sigma-54 interaction domain CLQ46_RS29700 PF02954 Bacterial regulatory protein, Fis family CLQ46_RS29705 PF04055 Radical SAM superfamily CLQ46_RS29705 PF06969 HemN C-terminal domain CLQ46_RS29715 PF04220 Der GTPase activator (YihI) CLQ46_RS29720 PF01926 50S ribosome-binding GTPase CLQ46_RS29725 PF00476 DNA polymerase family A CLQ46_RS29725 PF01612 3'-5' exonuclease CLQ46_RS29725 PF01367 5'-3' exonuclease, C-terminal SAM fold CLQ46_RS29725 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CLQ46_RS29735 PF01553 Acyltransferase CLQ46_RS29740 PF01323 DSBA-like thioredoxin domain CLQ46_RS29745 PF01636 Phosphotransferase enzyme family CLQ46_RS29750 PF06288 Protein of unknown function (DUF1040) CLQ46_RS29755 PF12804 MobA-like NTP transferase domain CLQ46_RS29760 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CLQ46_RS29790 PF00392 Bacterial regulatory proteins, gntR family CLQ46_RS29790 PF07729 FCD domain CLQ46_RS29795 PF07690 Major Facilitator Superfamily CLQ46_RS29800 PF00356 Bacterial regulatory proteins, lacI family CLQ46_RS29805 PF00294 pfkB family carbohydrate kinase CLQ46_RS29810 PF13407 Periplasmic binding protein domain CLQ46_RS29815 PF02653 Branched-chain amino acid transport system / permease component CLQ46_RS29820 PF00005 ABC transporter CLQ46_RS29825 PF05025 RbsD / FucU transport protein family CLQ46_RS29830 PF02705 K+ potassium transporter CLQ46_RS29835 PF17868 AAA lid domain CLQ46_RS29835 PF12592 Protein of unknown function (DUF3763) CLQ46_RS29835 PF07728 AAA domain (dynein-related subfamily) CLQ46_RS29840 PF05762 VWA domain containing CoxE-like protein CLQ46_RS29845 PF03590 Aspartate-ammonia ligase CLQ46_RS29850 PF01037 Lrp/AsnC ligand binding domain CLQ46_RS29855 PF00258 Flavodoxin CLQ46_RS29860 PF01134 Glucose inhibited division protein A CLQ46_RS29860 PF13932 GidA associated domain CLQ46_RS29865 PF02527 rRNA small subunit methyltransferase G CLQ46_RS29870 PF03899 ATP synthase I chain CLQ46_RS29875 PF00119 ATP synthase A chain CLQ46_RS29880 PF00137 ATP synthase subunit C CLQ46_RS29885 PF00430 ATP synthase B/B' CF(0) CLQ46_RS29890 PF00213 ATP synthase delta (OSCP) subunit CLQ46_RS29895 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLQ46_RS29895 PF00306 ATP synthase alpha/beta chain, C terminal domain CLQ46_RS29895 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLQ46_RS29900 PF00231 ATP synthase CLQ46_RS29905 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLQ46_RS29905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLQ46_RS29910 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CLQ46_RS29910 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CLQ46_RS29915 PF12804 MobA-like NTP transferase domain CLQ46_RS29915 PF00132 Bacterial transferase hexapeptide (six repeats) CLQ46_RS29920 PF01380 SIS domain CLQ46_RS29925 PF12849 PBP superfamily domain CLQ46_RS29930 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS29935 PF00528 Binding-protein-dependent transport system inner membrane component CLQ46_RS29940 PF00005 ABC transporter CLQ46_RS29945 PF01895 PhoU domain CLQ46_RS29955 PF02264 LamB porin CLQ46_RS29955 PF11471 Maltoporin periplasmic N-terminal extension CLQ46_RS29960 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CLQ46_RS29960 PF00756 Putative esterase CLQ46_RS29965 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CLQ46_RS29970 PF13419 Haloacid dehalogenase-like hydrolase CLQ46_RS29980 PF00860 Permease family CLQ46_RS29985 PF03358 NADPH-dependent FMN reductase CLQ46_RS29995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ46_RS29995 PF03466 LysR substrate binding domain CLQ46_RS30000 PF07690 Major Facilitator Superfamily CLQ46_RS30010 PF10396 GTP-binding protein TrmE N-terminus CLQ46_RS30010 PF12631 MnmE helical domain CLQ46_RS30010 PF01926 50S ribosome-binding GTPase CLQ46_RS30020 PF14849 YidC periplasmic domain CLQ46_RS30020 PF02096 60Kd inner membrane protein CLQ46_RS30025 PF01809 Putative membrane protein insertion efficiency factor CLQ46_RS30030 PF00825 Ribonuclease P CLQ46_RS30035 PF00468 Ribosomal protein L34