locus-tag class description CLQ99_RS00005 PF11638 DnaA N-terminal domain CLQ99_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CLQ99_RS00005 PF00308 Bacterial dnaA protein CLQ99_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CLQ99_RS00010 PF02767 DNA polymerase III beta subunit, central domain CLQ99_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CLQ99_RS00015 PF02463 RecF/RecN/SMC N terminal domain CLQ99_RS00020 PF00204 DNA gyrase B CLQ99_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus CLQ99_RS00020 PF01751 Toprim domain CLQ99_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS00020 PF18053 DNA gyrase B subunit insert domain CLQ99_RS00040 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS00040 PF07729 FCD domain CLQ99_RS00045 PF05598 Transposase domain (DUF772) CLQ99_RS00045 PF01609 Transposase DDE domain CLQ99_RS00055 PF05598 Transposase domain (DUF772) CLQ99_RS00055 PF01609 Transposase DDE domain CLQ99_RS00060 PF13378 Enolase C-terminal domain-like CLQ99_RS00060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CLQ99_RS00065 PF07690 Major Facilitator Superfamily CLQ99_RS00070 PF12566 Protein of unknown function (DUF3748) CLQ99_RS00070 PF07676 WD40-like Beta Propeller Repeat CLQ99_RS00075 PF07119 Protein of unknown function (DUF1375) CLQ99_RS00080 PF00011 Hsp20/alpha crystallin family CLQ99_RS00085 PF00011 Hsp20/alpha crystallin family CLQ99_RS00095 PF02080 TrkA-C domain CLQ99_RS00095 PF06826 Predicted Permease Membrane Region CLQ99_RS00100 PF07702 UTRA domain CLQ99_RS00100 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS00105 PF00367 phosphotransferase system, EIIB CLQ99_RS00105 PF02378 Phosphotransferase system, EIIC CLQ99_RS00110 PF11975 Family 4 glycosyl hydrolase C-terminal domain CLQ99_RS00110 PF02056 Family 4 glycosyl hydrolase CLQ99_RS00115 PF02656 Domain of unknown function (DUF202) CLQ99_RS00120 PF02656 Domain of unknown function (DUF202) CLQ99_RS00130 PF00291 Pyridoxal-phosphate dependent enzyme CLQ99_RS00135 PF02447 GntP family permease CLQ99_RS00140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS00140 PF03466 LysR substrate binding domain CLQ99_RS00145 PF07690 Major Facilitator Superfamily CLQ99_RS00170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ99_RS00170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLQ99_RS00170 PF00205 Thiamine pyrophosphate enzyme, central domain CLQ99_RS00175 PF01842 ACT domain CLQ99_RS00180 PF00196 Bacterial regulatory proteins, luxR family CLQ99_RS00180 PF00072 Response regulator receiver domain CLQ99_RS00185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS00185 PF05231 MASE1 CLQ99_RS00185 PF07730 Histidine kinase CLQ99_RS00190 PF07690 Major Facilitator Superfamily CLQ99_RS00195 PF07690 Major Facilitator Superfamily CLQ99_RS00200 PF06711 Protein of unknown function (DUF1198) CLQ99_RS00215 PF07690 Major Facilitator Superfamily CLQ99_RS00225 PF00266 Aminotransferase class-V CLQ99_RS00235 PF07702 UTRA domain CLQ99_RS00235 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS00240 PF01547 Bacterial extracellular solute-binding protein CLQ99_RS00245 PF00005 ABC transporter CLQ99_RS00245 PF08402 TOBE domain CLQ99_RS00250 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS00270 PF02264 LamB porin CLQ99_RS00275 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CLQ99_RS00280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ99_RS00280 PF02378 Phosphotransferase system, EIIC CLQ99_RS00285 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ99_RS00290 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS00295 PF07690 Major Facilitator Superfamily CLQ99_RS00300 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CLQ99_RS00300 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit CLQ99_RS00305 PF03466 LysR substrate binding domain CLQ99_RS00305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS00310 PF02585 GlcNAc-PI de-N-acetylase CLQ99_RS00315 PF03737 Aldolase/RraA CLQ99_RS00320 PF04303 PrpF protein CLQ99_RS00335 PF00892 EamA-like transporter family CLQ99_RS00340 PF02378 Phosphotransferase system, EIIC CLQ99_RS00340 PF00367 phosphotransferase system, EIIB CLQ99_RS00345 PF13580 SIS domain CLQ99_RS00350 PF07690 Major Facilitator Superfamily CLQ99_RS00355 PF02321 Outer membrane efflux protein CLQ99_RS00370 PF13610 DDE domain CLQ99_RS00385 PF00529 HlyD membrane-fusion protein of T1SS CLQ99_RS00385 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ99_RS00395 PF00583 Acetyltransferase (GNAT) family CLQ99_RS00405 PF00440 Bacterial regulatory proteins, tetR family CLQ99_RS00410 PF07690 Major Facilitator Superfamily CLQ99_RS00415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS00415 PF03466 LysR substrate binding domain CLQ99_RS00435 PF12833 Helix-turn-helix domain CLQ99_RS00440 PF03180 NLPA lipoprotein CLQ99_RS00450 PF00293 NUDIX domain CLQ99_RS00455 PF12706 Beta-lactamase superfamily domain CLQ99_RS00460 PF01965 DJ-1/PfpI family CLQ99_RS00465 PF00107 Zinc-binding dehydrogenase CLQ99_RS00465 PF08240 Alcohol dehydrogenase GroES-like domain CLQ99_RS00480 PF00107 Zinc-binding dehydrogenase CLQ99_RS00480 PF08240 Alcohol dehydrogenase GroES-like domain CLQ99_RS00505 PF01055 Glycosyl hydrolases family 31 CLQ99_RS00505 PF13802 Galactose mutarotase-like CLQ99_RS00515 PF11975 Family 4 glycosyl hydrolase C-terminal domain CLQ99_RS00515 PF02056 Family 4 glycosyl hydrolase CLQ99_RS00520 PF02378 Phosphotransferase system, EIIC CLQ99_RS00520 PF00367 phosphotransferase system, EIIB CLQ99_RS00525 PF05170 AsmA family CLQ99_RS00530 PF00860 Permease family CLQ99_RS00535 PF03616 Sodium/glutamate symporter CLQ99_RS00540 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ99_RS00540 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ99_RS00545 PF00230 Major intrinsic protein CLQ99_RS00550 PF06005 Cell division protein ZapB CLQ99_RS00560 PF02611 CDP-diacylglycerol pyrophosphatase CLQ99_RS00570 PF00121 Triosephosphate isomerase CLQ99_RS00575 PF07305 Protein of unknown function (DUF1454) CLQ99_RS00580 PF05656 Protein of unknown function (DUF805) CLQ99_RS00585 PF00970 Oxidoreductase FAD-binding domain CLQ99_RS00585 PF00175 Oxidoreductase NAD-binding domain CLQ99_RS00590 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CLQ99_RS00595 PF17191 RecG wedge domain CLQ99_RS00595 PF00271 Helicase conserved C-terminal domain CLQ99_RS00595 PF00270 DEAD/DEAH box helicase CLQ99_RS00600 PF12105 SpoU, rRNA methylase, C-terminal CLQ99_RS00600 PF00588 SpoU rRNA Methylase family CLQ99_RS00605 PF02824 TGS domain CLQ99_RS00605 PF13291 ACT domain CLQ99_RS00605 PF04607 Region found in RelA / SpoT proteins CLQ99_RS00610 PF01192 RNA polymerase Rpb6 CLQ99_RS00615 PF00625 Guanylate kinase CLQ99_RS00620 PF01653 NAD-dependent DNA ligase adenylation domain CLQ99_RS00620 PF03120 NAD-dependent DNA ligase OB-fold domain CLQ99_RS00625 PF03458 UPF0126 domain CLQ99_RS00635 PF02805 Metal binding domain of Ada CLQ99_RS00635 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CLQ99_RS00635 PF12833 Helix-turn-helix domain CLQ99_RS00635 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CLQ99_RS00645 PF08340 Domain of unknown function (DUF1732) CLQ99_RS00645 PF03755 YicC-like family, N-terminal region CLQ99_RS00655 PF01609 Transposase DDE domain CLQ99_RS00655 PF05598 Transposase domain (DUF772) CLQ99_RS00670 PF00005 ABC transporter CLQ99_RS00680 PF01138 3' exoribonuclease family, domain 1 CLQ99_RS00680 PF03725 3' exoribonuclease family, domain 2 CLQ99_RS00685 PF00156 Phosphoribosyl transferase domain CLQ99_RS00690 PF00440 Bacterial regulatory proteins, tetR family CLQ99_RS00695 PF00692 dUTPase CLQ99_RS00700 PF04127 DNA / pantothenate metabolism flavoprotein CLQ99_RS00700 PF02441 Flavoprotein CLQ99_RS00705 PF04002 RadC-like JAB domain CLQ99_RS00710 PF00830 Ribosomal L28 family CLQ99_RS00715 PF00471 Ribosomal protein L33 CLQ99_RS00720 PF06827 Zinc finger found in FPG and IleRS CLQ99_RS00720 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CLQ99_RS00720 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CLQ99_RS00725 PF01467 Cytidylyltransferase-like CLQ99_RS00730 PF00535 Glycosyl transferase family 2 CLQ99_RS00735 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CLQ99_RS00740 PF00535 Glycosyl transferase family 2 CLQ99_RS00745 PF00534 Glycosyl transferases group 1 CLQ99_RS00745 PF13439 Glycosyltransferase Family 4 CLQ99_RS00750 PF00534 Glycosyl transferases group 1 CLQ99_RS00750 PF13439 Glycosyltransferase Family 4 CLQ99_RS00755 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CLQ99_RS00770 PF04932 O-Antigen ligase CLQ99_RS00780 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CLQ99_RS00785 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CLQ99_RS00790 PF01370 NAD dependent epimerase/dehydratase family CLQ99_RS00795 PF00155 Aminotransferase class I and II CLQ99_RS00800 PF08240 Alcohol dehydrogenase GroES-like domain CLQ99_RS00800 PF00107 Zinc-binding dehydrogenase CLQ99_RS00805 PF00535 Glycosyl transferase family 2 CLQ99_RS00810 PF04748 Divergent polysaccharide deacetylase CLQ99_RS00815 PF01551 Peptidase family M23 CLQ99_RS00820 PF01676 Metalloenzyme superfamily CLQ99_RS00820 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CLQ99_RS00825 PF00581 Rhodanese-like domain CLQ99_RS00830 PF00462 Glutaredoxin CLQ99_RS00835 PF02556 Preprotein translocase subunit SecB CLQ99_RS00840 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CLQ99_RS00840 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CLQ99_RS00845 PF06426 Serine acetyltransferase, N-terminal CLQ99_RS00845 PF00132 Bacterial transferase hexapeptide (six repeats) CLQ99_RS00850 PF00588 SpoU rRNA Methylase family CLQ99_RS00855 PF01070 FMN-dependent dehydrogenase CLQ99_RS00860 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS00860 PF07729 FCD domain CLQ99_RS00865 PF02652 L-lactate permease CLQ99_RS00870 PF10928 Protein of unknown function (DUF2810) CLQ99_RS00880 PF05068 Mannitol repressor CLQ99_RS00885 PF08125 Mannitol dehydrogenase C-terminal domain CLQ99_RS00885 PF01232 Mannitol dehydrogenase Rossmann domain CLQ99_RS00890 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ99_RS00890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ99_RS00890 PF02378 Phosphotransferase system, EIIC CLQ99_RS00895 PF11742 Protein of unknown function (DUF3302) CLQ99_RS00900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ99_RS00900 PF00529 HlyD membrane-fusion protein of T1SS CLQ99_RS00905 PF13417 Glutathione S-transferase, N-terminal domain CLQ99_RS00905 PF00043 Glutathione S-transferase, C-terminal domain CLQ99_RS00910 PF12390 Selenocysteine synthase N terminal CLQ99_RS00910 PF03841 L-seryl-tRNA selenium transferase CLQ99_RS00915 PF03144 Elongation factor Tu domain 2 CLQ99_RS00915 PF00009 Elongation factor Tu GTP binding domain CLQ99_RS00915 PF09107 Elongation factor SelB, winged helix CLQ99_RS00915 PF09106 Elongation factor SelB, winged helix CLQ99_RS00920 PF01614 Bacterial transcriptional regulator CLQ99_RS00920 PF09339 IclR helix-turn-helix domain CLQ99_RS00925 PF12800 4Fe-4S binding domain CLQ99_RS00925 PF13247 4Fe-4S dicluster domain CLQ99_RS00930 PF00155 Aminotransferase class I and II CLQ99_RS00935 PF00128 Alpha amylase, catalytic domain CLQ99_RS00940 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CLQ99_RS00945 PF12833 Helix-turn-helix domain CLQ99_RS00950 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS00955 PF00005 ABC transporter CLQ99_RS00960 PF13407 Periplasmic binding protein domain CLQ99_RS00975 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ99_RS00975 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ99_RS00980 PF05360 yiaA/B two helix domain CLQ99_RS00985 PF05360 yiaA/B two helix domain CLQ99_RS00990 PF01757 Acyltransferase family CLQ99_RS00995 PF13983 YsaB-like lipoprotein CLQ99_RS01005 PF02091 Glycyl-tRNA synthetase alpha subunit CLQ99_RS01010 PF05746 DALR anticodon binding domain CLQ99_RS01010 PF02092 Glycyl-tRNA synthetase beta subunit CLQ99_RS01020 PF01848 Hok/gef family CLQ99_RS01025 PF00005 ABC transporter CLQ99_RS01025 PF12848 ABC transporter CLQ99_RS01030 PF00313 'Cold-shock' DNA-binding domain CLQ99_RS01035 PF01381 Helix-turn-helix CLQ99_RS01040 PF07690 Major Facilitator Superfamily CLQ99_RS01050 PF11254 Protein of unknown function (DUF3053) CLQ99_RS01055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLQ99_RS01055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLQ99_RS01060 PF07690 Major Facilitator Superfamily CLQ99_RS01065 PF00294 pfkB family carbohydrate kinase CLQ99_RS01075 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS01080 PF13488 Glycine zipper CLQ99_RS01080 PF00691 OmpA family CLQ99_RS01085 PF18364 Molybdopterin oxidoreductase N-terminal domain CLQ99_RS01085 PF01568 Molydopterin dinucleotide binding domain CLQ99_RS01085 PF00384 Molybdopterin oxidoreductase CLQ99_RS01090 PF00583 Acetyltransferase (GNAT) family CLQ99_RS01095 PF03352 Methyladenine glycosylase CLQ99_RS01100 PF03797 Autotransporter beta-domain CLQ99_RS01105 PF07690 Major Facilitator Superfamily CLQ99_RS01110 PF00884 Sulfatase CLQ99_RS01110 PF08019 Phosphoethanolamine transferase EptA/EptB CLQ99_RS01135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ99_RS01140 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS01145 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS01145 PF12911 N-terminal TM domain of oligopeptide transport permease C CLQ99_RS01150 PF00005 ABC transporter CLQ99_RS01150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ99_RS01155 PF00005 ABC transporter CLQ99_RS01155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ99_RS01175 PF03170 Bacterial cellulose synthase subunit CLQ99_RS01175 PF07238 PilZ domain CLQ99_RS01175 PF03552 Cellulose synthase CLQ99_RS01175 PF00535 Glycosyl transferase family 2 CLQ99_RS01180 PF03170 Bacterial cellulose synthase subunit CLQ99_RS01185 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CLQ99_RS01195 PF01270 Glycosyl hydrolases family 8 CLQ99_RS01200 PF11658 Cellulose biosynthesis protein BcsG CLQ99_RS01205 PF11120 Cellulose biosynthesis protein BcsF CLQ99_RS01210 PF10995 Cellulose biosynthesis GIL CLQ99_RS01215 PF10945 Cellulose biosynthesis protein BcsR CLQ99_RS01220 PF06564 Cellulose biosynthesis protein BcsQ CLQ99_RS01225 PF00535 Glycosyl transferase family 2 CLQ99_RS01225 PF07238 PilZ domain CLQ99_RS01230 PF03170 Bacterial cellulose synthase subunit CLQ99_RS01235 PF01270 Glycosyl hydrolases family 8 CLQ99_RS01240 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) CLQ99_RS01245 PF00563 EAL domain CLQ99_RS01245 PF17154 Gammaproteobacterial periplasmic sensor domain CLQ99_RS01245 PF00990 Diguanylate cyclase, GGDEF domain CLQ99_RS01245 PF00672 HAMP domain CLQ99_RS01250 PF00375 Sodium:dicarboxylate symporter family CLQ99_RS01255 PF00675 Insulinase (Peptidase family M16) CLQ99_RS01255 PF05193 Peptidase M16 inactive domain CLQ99_RS01260 PF00294 pfkB family carbohydrate kinase CLQ99_RS01270 PF05170 AsmA family CLQ99_RS01275 PF07690 Major Facilitator Superfamily CLQ99_RS01275 PF00083 Sugar (and other) transporter CLQ99_RS01280 PF03631 Virulence factor BrkB CLQ99_RS01285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS01285 PF03466 LysR substrate binding domain CLQ99_RS01295 PF13302 Acetyltransferase (GNAT) domain CLQ99_RS01300 PF01204 Trehalase CLQ99_RS01305 PF00465 Iron-containing alcohol dehydrogenase CLQ99_RS01315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLQ99_RS01315 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ99_RS01320 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CLQ99_RS01325 PF01569 PAP2 superfamily CLQ99_RS01330 PF01432 Peptidase family M3 CLQ99_RS01335 PF04445 Putative SAM-dependent methyltransferase CLQ99_RS01340 PF00854 POT family CLQ99_RS01345 PF00582 Universal stress protein family CLQ99_RS01350 PF10625 Universal stress protein B (UspB) CLQ99_RS01355 PF01384 Phosphate transporter family CLQ99_RS01365 PF01769 Divalent cation transporter CLQ99_RS01365 PF03448 MgtE intracellular N domain CLQ99_RS01365 PF00571 CBS domain CLQ99_RS01370 PF08753 NikR C terminal nickel binding domain CLQ99_RS01370 PF01402 Ribbon-helix-helix protein, copG family CLQ99_RS01375 PF00005 ABC transporter CLQ99_RS01380 PF00005 ABC transporter CLQ99_RS01385 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS01390 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS01395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ99_RS01405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS01405 PF03466 LysR substrate binding domain CLQ99_RS01410 PF05870 Phenolic acid decarboxylase (PAD) CLQ99_RS01415 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLQ99_RS01420 PF00535 Glycosyl transferase family 2 CLQ99_RS01425 PF02911 Formyl transferase, C-terminal domain CLQ99_RS01425 PF01370 NAD dependent epimerase/dehydratase family CLQ99_RS01425 PF00551 Formyl transferase CLQ99_RS01430 PF01522 Polysaccharide deacetylase CLQ99_RS01435 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CLQ99_RS01440 PF00892 EamA-like transporter family CLQ99_RS01450 PF01594 AI-2E family transporter CLQ99_RS01455 PF07690 Major Facilitator Superfamily CLQ99_RS01460 PF08786 DcrB CLQ99_RS01465 PF02592 Putative vitamin uptake transporter CLQ99_RS01470 PF01206 Sulfurtransferase TusA CLQ99_RS01475 PF00403 Heavy-metal-associated domain CLQ99_RS01480 PF07947 YhhN family CLQ99_RS01485 PF10694 Protein of unknown function (DUF2500) CLQ99_RS01490 PF06611 Protein of unknown function (DUF1145) CLQ99_RS01500 PF02881 SRP54-type protein, helical bundle domain CLQ99_RS01500 PF00448 SRP54-type protein, GTPase domain CLQ99_RS01505 PF00005 ABC transporter CLQ99_RS01510 PF18075 FtsX extracellular domain CLQ99_RS01510 PF02687 FtsX-like permease family CLQ99_RS01515 PF04545 Sigma-70, region 4 CLQ99_RS01515 PF04542 Sigma-70 region 2 CLQ99_RS01520 PF00155 Aminotransferase class I and II CLQ99_RS01520 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS01525 PF00202 Aminotransferase class-III CLQ99_RS01535 PF13458 Periplasmic binding protein CLQ99_RS01540 PF12568 Acetyltransferase (GNAT) domain, PanZ CLQ99_RS01550 PF13458 Periplasmic binding protein CLQ99_RS01555 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS01560 PF11862 Domain of unknown function (DUF3382) CLQ99_RS01560 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS01565 PF00005 ABC transporter CLQ99_RS01565 PF12399 Branched-chain amino acid ATP-binding cassette transporter CLQ99_RS01570 PF00005 ABC transporter CLQ99_RS01575 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CLQ99_RS01585 PF13416 Bacterial extracellular solute-binding protein CLQ99_RS01590 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS01595 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS01600 PF17912 MalK OB fold domain CLQ99_RS01600 PF00005 ABC transporter CLQ99_RS01605 PF03009 Glycerophosphoryl diester phosphodiesterase family CLQ99_RS01610 PF10956 Protein of unknown function (DUF2756) CLQ99_RS01620 PF00583 Acetyltransferase (GNAT) family CLQ99_RS01630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ99_RS01630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLQ99_RS01635 PF02678 Pirin CLQ99_RS01635 PF17954 Quercetinase C-terminal cupin domain CLQ99_RS01640 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CLQ99_RS01640 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS01645 PF01202 Shikimate kinase CLQ99_RS01650 PF02447 GntP family permease CLQ99_RS01660 PF02774 Semialdehyde dehydrogenase, dimerisation domain CLQ99_RS01660 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLQ99_RS01665 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CLQ99_RS01665 PF00128 Alpha amylase, catalytic domain CLQ99_RS01665 PF02806 Alpha amylase, C-terminal all-beta domain CLQ99_RS01670 PF00128 Alpha amylase, catalytic domain CLQ99_RS01670 PF18390 Glycogen debranching enzyme C-terminal domain CLQ99_RS01670 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CLQ99_RS01675 PF00483 Nucleotidyl transferase CLQ99_RS01680 PF00534 Glycosyl transferases group 1 CLQ99_RS01680 PF08323 Starch synthase catalytic domain CLQ99_RS01685 PF00343 Carbohydrate phosphorylase CLQ99_RS01700 PF01266 FAD dependent oxidoreductase CLQ99_RS01700 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CLQ99_RS01705 PF00581 Rhodanese-like domain CLQ99_RS01710 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease CLQ99_RS01710 PF01694 Rhomboid family CLQ99_RS01715 PF00455 DeoR C terminal sensor domain CLQ99_RS01715 PF08220 DeoR-like helix-turn-helix domain CLQ99_RS01720 PF17874 MalT-like TPR region CLQ99_RS01720 PF00196 Bacterial regulatory proteins, luxR family CLQ99_RS01730 PF00343 Carbohydrate phosphorylase CLQ99_RS01735 PF02446 4-alpha-glucanotransferase CLQ99_RS01740 PF02447 GntP family permease CLQ99_RS01745 PF01521 Iron-sulphur cluster biosynthesis CLQ99_RS01745 PF01106 NifU-like domain CLQ99_RS01750 PF00156 Phosphoribosyl transferase domain CLQ99_RS01755 PF00561 alpha/beta hydrolase fold CLQ99_RS01765 PF09012 FeoC like transcriptional regulator CLQ99_RS01770 PF07664 Ferrous iron transport protein B C terminus CLQ99_RS01770 PF17910 FeoB cytosolic helical domain CLQ99_RS01770 PF02421 Ferrous iron transport protein B CLQ99_RS01770 PF07670 Nucleoside recognition CLQ99_RS01775 PF04023 FeoA domain CLQ99_RS01780 PF16921 Tex protein YqgF-like domain CLQ99_RS01780 PF09371 Tex-like protein N-terminal domain CLQ99_RS01780 PF00575 S1 RNA binding domain CLQ99_RS01780 PF17674 HHH domain CLQ99_RS01785 PF01272 Transcription elongation factor, GreA/GreB, C-term CLQ99_RS01785 PF03449 Transcription elongation factor, N-terminal CLQ99_RS01790 PF00072 Response regulator receiver domain CLQ99_RS01790 PF00486 Transcriptional regulatory protein, C terminal CLQ99_RS01795 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS01795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS01795 PF00672 HAMP domain CLQ99_RS01800 PF01293 Phosphoenolpyruvate carboxykinase CLQ99_RS01805 PF01430 Hsp33 protein CLQ99_RS01810 PF01479 S4 domain CLQ99_RS01815 PF13419 Haloacid dehalogenase-like hydrolase CLQ99_RS01820 PF07095 Intracellular growth attenuator protein IgaA CLQ99_RS01825 PF00293 NUDIX domain CLQ99_RS01830 PF17092 Penicillin-binding protein OB-like domain CLQ99_RS01830 PF00912 Transglycosylase CLQ99_RS01830 PF00905 Penicillin binding protein transpeptidase domain CLQ99_RS01855 PF00263 Bacterial type II and III secretion system protein CLQ99_RS01855 PF03958 Bacterial type II/III secretion system short domain CLQ99_RS01865 PF01202 Shikimate kinase CLQ99_RS01870 PF01761 3-dehydroquinate synthase CLQ99_RS01875 PF05036 Sporulation related domain CLQ99_RS01880 PF02086 D12 class N6 adenine-specific DNA methyltransferase CLQ99_RS01885 PF00834 Ribulose-phosphate 3 epimerase family CLQ99_RS01890 PF13419 Haloacid dehalogenase-like hydrolase CLQ99_RS01895 PF00579 tRNA synthetases class I (W and Y) CLQ99_RS01900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLQ99_RS01900 PF14824 Sirohaem biosynthesis protein central CLQ99_RS01900 PF10414 Sirohaem synthase dimerisation region CLQ99_RS01905 PF13806 Rieske-like [2Fe-2S] domain CLQ99_RS01910 PF18267 Rubredoxin NAD+ reductase C-terminal domain CLQ99_RS01910 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ99_RS01910 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CLQ99_RS01910 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CLQ99_RS01910 PF04324 BFD-like [2Fe-2S] binding domain CLQ99_RS01915 PF07969 Amidohydrolase family CLQ99_RS01920 PF07690 Major Facilitator Superfamily CLQ99_RS01925 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CLQ99_RS01930 PF10832 Protein of unknown function (DUF2559) CLQ99_RS01935 PF02661 Fic/DOC family CLQ99_RS01940 PF00117 Glutamine amidotransferase class-I CLQ99_RS01945 PF00202 Aminotransferase class-III CLQ99_RS01950 PF12805 FUSC-like inner membrane protein yccS CLQ99_RS01955 PF13545 Crp-like helix-turn-helix domain CLQ99_RS01955 PF00027 Cyclic nucleotide-binding domain CLQ99_RS01960 PF02566 OsmC-like protein CLQ99_RS01965 PF00485 Phosphoribulokinase / Uridine kinase family CLQ99_RS01970 PF06794 Uncharacterised protein family (UPF0270) CLQ99_RS01975 PF00561 alpha/beta hydrolase fold CLQ99_RS01985 PF12848 ABC transporter CLQ99_RS01985 PF00005 ABC transporter CLQ99_RS01990 PF02525 Flavodoxin-like fold CLQ99_RS01995 PF02254 TrkA-N domain CLQ99_RS01995 PF00999 Sodium/hydrogen exchanger family CLQ99_RS02000 PF09526 Probable metal-binding protein (DUF2387) CLQ99_RS02005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CLQ99_RS02010 PF04102 SlyX CLQ99_RS02015 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CLQ99_RS02015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CLQ99_RS02020 PF13309 HTH domain CLQ99_RS02020 PF08348 YheO-like PAS domain CLQ99_RS02025 PF02635 DsrE/DsrF-like family CLQ99_RS02030 PF02635 DsrE/DsrF-like family CLQ99_RS02035 PF04077 DsrH like protein CLQ99_RS02040 PF00164 Ribosomal protein S12/S23 CLQ99_RS02045 PF00177 Ribosomal protein S7p/S5e CLQ99_RS02050 PF00009 Elongation factor Tu GTP binding domain CLQ99_RS02050 PF00679 Elongation factor G C-terminus CLQ99_RS02050 PF14492 Elongation Factor G, domain II CLQ99_RS02050 PF03764 Elongation factor G, domain IV CLQ99_RS02050 PF03144 Elongation factor Tu domain 2 CLQ99_RS02055 PF03143 Elongation factor Tu C-terminal domain CLQ99_RS02055 PF00009 Elongation factor Tu GTP binding domain CLQ99_RS02055 PF03144 Elongation factor Tu domain 2 CLQ99_RS02060 PF04324 BFD-like [2Fe-2S] binding domain CLQ99_RS02065 PF00210 Ferritin-like domain CLQ99_RS02070 PF01478 Type IV leader peptidase family CLQ99_RS02075 PF00338 Ribosomal protein S10p/S20e CLQ99_RS02080 PF00297 Ribosomal protein L3 CLQ99_RS02085 PF00573 Ribosomal protein L4/L1 family CLQ99_RS02090 PF00276 Ribosomal protein L23 CLQ99_RS02095 PF03947 Ribosomal Proteins L2, C-terminal domain CLQ99_RS02095 PF00181 Ribosomal Proteins L2, RNA binding domain CLQ99_RS02100 PF00203 Ribosomal protein S19 CLQ99_RS02105 PF00237 Ribosomal protein L22p/L17e CLQ99_RS02110 PF00189 Ribosomal protein S3, C-terminal domain CLQ99_RS02110 PF07650 KH domain CLQ99_RS02115 PF00252 Ribosomal protein L16p/L10e CLQ99_RS02120 PF00831 Ribosomal L29 protein CLQ99_RS02125 PF00366 Ribosomal protein S17 CLQ99_RS02130 PF00238 Ribosomal protein L14p/L23e CLQ99_RS02135 PF00467 KOW motif CLQ99_RS02135 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CLQ99_RS02140 PF00281 Ribosomal protein L5 CLQ99_RS02140 PF00673 ribosomal L5P family C-terminus CLQ99_RS02145 PF00253 Ribosomal protein S14p/S29e CLQ99_RS02150 PF00410 Ribosomal protein S8 CLQ99_RS02155 PF00347 Ribosomal protein L6 CLQ99_RS02160 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CLQ99_RS02165 PF03719 Ribosomal protein S5, C-terminal domain CLQ99_RS02165 PF00333 Ribosomal protein S5, N-terminal domain CLQ99_RS02170 PF00327 Ribosomal protein L30p/L7e CLQ99_RS02175 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CLQ99_RS02180 PF00344 SecY translocase CLQ99_RS02185 PF00444 Ribosomal protein L36 CLQ99_RS02190 PF00416 Ribosomal protein S13/S18 CLQ99_RS02195 PF00411 Ribosomal protein S11 CLQ99_RS02200 PF01479 S4 domain CLQ99_RS02200 PF00163 Ribosomal protein S4/S9 N-terminal domain CLQ99_RS02205 PF01000 RNA polymerase Rpb3/RpoA insert domain CLQ99_RS02205 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CLQ99_RS02205 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CLQ99_RS02210 PF01196 Ribosomal protein L17 CLQ99_RS02215 PF09350 Domain of unknown function (DUF1992) CLQ99_RS02220 PF13411 MerR HTH family regulatory protein CLQ99_RS02225 PF03889 Alternative ribosome-rescue factor A CLQ99_RS02230 PF01741 Large-conductance mechanosensitive channel, MscL CLQ99_RS02235 PF02080 TrkA-C domain CLQ99_RS02235 PF02254 TrkA-N domain CLQ99_RS02240 PF01029 NusB family CLQ99_RS02240 PF01189 16S rRNA methyltransferase RsmB/F CLQ99_RS02245 PF02911 Formyl transferase, C-terminal domain CLQ99_RS02245 PF00551 Formyl transferase CLQ99_RS02250 PF01327 Polypeptide deformylase CLQ99_RS02255 PF17782 DprA winged helix domain CLQ99_RS02255 PF02481 DNA recombination-mediator protein A CLQ99_RS02260 PF04361 Protein of unknown function (DUF494) CLQ99_RS02265 PF01396 Topoisomerase DNA binding C4 zinc finger CLQ99_RS02270 PF01300 Telomere recombination CLQ99_RS02275 PF01488 Shikimate / quinate 5-dehydrogenase CLQ99_RS02275 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CLQ99_RS02275 PF08501 Shikimate dehydrogenase substrate binding domain CLQ99_RS02280 PF07369 Protein of unknown function (DUF1488) CLQ99_RS02285 PF00132 Bacterial transferase hexapeptide (six repeats) CLQ99_RS02320 PF00873 AcrB/AcrD/AcrF family CLQ99_RS02325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ99_RS02325 PF00529 HlyD membrane-fusion protein of T1SS CLQ99_RS02330 PF00440 Bacterial regulatory proteins, tetR family CLQ99_RS02330 PF08361 MAATS-type transcriptional repressor, C-terminal region CLQ99_RS02335 PF14659 Phage integrase, N-terminal SAM-like domain CLQ99_RS02335 PF00589 Phage integrase family CLQ99_RS02335 PF13356 Arm DNA-binding domain CLQ99_RS02350 PF08346 AntA/AntB antirepressor CLQ99_RS02350 PF10548 P22AR C-terminal domain CLQ99_RS02440 PF03354 Phage Terminase CLQ99_RS02450 PF02954 Bacterial regulatory protein, Fis family CLQ99_RS02455 PF01207 Dihydrouridine synthase (Dus) CLQ99_RS02470 PF00474 Sodium:solute symporter family CLQ99_RS02475 PF06196 Protein of unknown function (DUF997) CLQ99_RS02480 PF00289 Biotin carboxylase, N-terminal domain CLQ99_RS02480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLQ99_RS02480 PF02785 Biotin carboxylase C-terminal domain CLQ99_RS02485 PF00364 Biotin-requiring enzyme CLQ99_RS02490 PF01220 Dehydroquinase class II CLQ99_RS02495 PF01794 Ferric reductase like transmembrane component CLQ99_RS02500 PF00174 Oxidoreductase molybdopterin binding domain CLQ99_RS02510 PF00990 Diguanylate cyclase, GGDEF domain CLQ99_RS02510 PF00563 EAL domain CLQ99_RS02510 PF17157 Gammaproteobacterial periplasmic sensor domain CLQ99_RS02520 PF04085 rod shape-determining protein MreC CLQ99_RS02525 PF04093 rod shape-determining protein MreD CLQ99_RS02530 PF02545 Maf-like protein CLQ99_RS02535 PF00575 S1 RNA binding domain CLQ99_RS02535 PF10150 Ribonuclease E/G family CLQ99_RS02540 PF13502 AsmA-like C-terminal region CLQ99_RS02540 PF13116 Protein of unknown function CLQ99_RS02545 PF01523 Putative modulator of DNA gyrase CLQ99_RS02550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS02550 PF03466 LysR substrate binding domain CLQ99_RS02555 PF07869 Protein of unknown function (DUF1656) CLQ99_RS02560 PF13533 Biotin-lipoyl like CLQ99_RS02565 PF04632 Fusaric acid resistance protein family CLQ99_RS02570 PF01337 Barstar (barnase inhibitor) CLQ99_RS02575 PF07338 Protein of unknown function (DUF1471) CLQ99_RS02580 PF07338 Protein of unknown function (DUF1471) CLQ99_RS02585 PF02863 Arginine repressor, C-terminal domain CLQ99_RS02585 PF01316 Arginine repressor, DNA binding domain CLQ99_RS02590 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CLQ99_RS02590 PF00056 lactate/malate dehydrogenase, NAD binding domain CLQ99_RS02595 PF13180 PDZ domain CLQ99_RS02600 PF00595 PDZ domain CLQ99_RS02600 PF13180 PDZ domain CLQ99_RS02605 PF06295 Protein of unknown function (DUF1043) CLQ99_RS02610 PF03969 AFG1-like ATPase CLQ99_RS02615 PF00572 Ribosomal protein L13 CLQ99_RS02620 PF00380 Ribosomal protein S9/S16 CLQ99_RS02630 PF00043 Glutathione S-transferase, C-terminal domain CLQ99_RS02630 PF02798 Glutathione S-transferase, N-terminal domain CLQ99_RS02635 PF04386 Stringent starvation protein B CLQ99_RS02640 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CLQ99_RS02645 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLQ99_RS02645 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ99_RS02650 PF01493 GXGXG motif CLQ99_RS02650 PF00310 Glutamine amidotransferases class-II CLQ99_RS02650 PF04898 Glutamate synthase central domain CLQ99_RS02650 PF01645 Conserved region in glutamate synthase CLQ99_RS02655 PF16199 Radical_SAM C-terminal domain CLQ99_RS02655 PF04055 Radical SAM superfamily CLQ99_RS02660 PF07690 Major Facilitator Superfamily CLQ99_RS02665 PF08240 Alcohol dehydrogenase GroES-like domain CLQ99_RS02665 PF00107 Zinc-binding dehydrogenase CLQ99_RS02670 PF03786 D-mannonate dehydratase (UxuA) CLQ99_RS02675 PF00989 PAS fold CLQ99_RS02675 PF00072 Response regulator receiver domain CLQ99_RS02675 PF01627 Hpt domain CLQ99_RS02675 PF18415 Histidine kinase receptor ArcB trans-membrane domain CLQ99_RS02675 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS02675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS02685 PF00912 Transglycosylase CLQ99_RS02690 PF00381 PTS HPr component phosphorylation site CLQ99_RS02695 PF03668 P-loop ATPase protein family CLQ99_RS02700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ99_RS02705 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CLQ99_RS02710 PF04963 Sigma-54 factor, core binding domain CLQ99_RS02710 PF00309 Sigma-54 factor, Activator interacting domain (AID) CLQ99_RS02710 PF04552 Sigma-54, DNA binding domain CLQ99_RS02715 PF00005 ABC transporter CLQ99_RS02715 PF12399 Branched-chain amino acid ATP-binding cassette transporter CLQ99_RS02720 PF03968 OstA-like protein CLQ99_RS02725 PF06835 Lipopolysaccharide-assembly, LptC-related CLQ99_RS02735 PF00571 CBS domain CLQ99_RS02735 PF01380 SIS domain CLQ99_RS02740 PF01699 Sodium/calcium exchanger protein CLQ99_RS02750 PF00005 ABC transporter CLQ99_RS02755 PF02405 Permease MlaE CLQ99_RS02760 PF02470 MlaD protein CLQ99_RS02765 PF05494 MlaC protein CLQ99_RS02770 PF13466 STAS domain CLQ99_RS02775 PF01722 BolA-like protein CLQ99_RS02780 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLQ99_RS02785 PF13693 Winged helix-turn-helix DNA-binding CLQ99_RS02790 PF00348 Polyprenyl synthetase CLQ99_RS02795 PF00829 Ribosomal prokaryotic L21 protein CLQ99_RS02800 PF01016 Ribosomal L27 protein CLQ99_RS02805 PF00892 EamA-like transporter family CLQ99_RS02810 PF01018 GTP1/OBG CLQ99_RS02810 PF01926 50S ribosome-binding GTPase CLQ99_RS02815 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CLQ99_RS02820 PF03449 Transcription elongation factor, N-terminal CLQ99_RS02820 PF01272 Transcription elongation factor, GreA/GreB, C-term CLQ99_RS02825 PF01985 CRS1 / YhbY (CRM) domain CLQ99_RS02830 PF01728 FtsJ-like methyltransferase CLQ99_RS02835 PF00004 ATPase family associated with various cellular activities (AAA) CLQ99_RS02835 PF06480 FtsH Extracellular CLQ99_RS02835 PF01434 Peptidase family M41 CLQ99_RS02835 PF17862 AAA+ lid domain CLQ99_RS02840 PF00809 Pterin binding enzyme CLQ99_RS02845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CLQ99_RS02845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CLQ99_RS02845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CLQ99_RS02845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CLQ99_RS02850 PF03840 Preprotein translocase SecG subunit CLQ99_RS02865 PF07437 YfaZ precursor CLQ99_RS02870 PF15977 Winged helix-turn-helix DNA binding CLQ99_RS02875 PF00764 Arginosuccinate synthase CLQ99_RS02885 PF17384 RimP C-terminal SH3 domain CLQ99_RS02885 PF02576 RimP N-terminal domain CLQ99_RS02890 PF08529 NusA N-terminal domain CLQ99_RS02890 PF00575 S1 RNA binding domain CLQ99_RS02890 PF13184 NusA-like KH domain CLQ99_RS02895 PF00009 Elongation factor Tu GTP binding domain CLQ99_RS02895 PF11987 Translation-initiation factor 2 CLQ99_RS02895 PF04760 Translation initiation factor IF-2, N-terminal region CLQ99_RS02895 PF08364 Bacterial translation initiation factor IF-2 associated region CLQ99_RS02900 PF02033 Ribosome-binding factor A CLQ99_RS02905 PF09157 Pseudouridine synthase II TruB, C-terminal CLQ99_RS02905 PF16198 tRNA pseudouridylate synthase B C-terminal domain CLQ99_RS02905 PF01509 TruB family pseudouridylate synthase (N terminal domain) CLQ99_RS02910 PF00312 Ribosomal protein S15 CLQ99_RS02920 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CLQ99_RS02920 PF00013 KH domain CLQ99_RS02920 PF00575 S1 RNA binding domain CLQ99_RS02920 PF01138 3' exoribonuclease family, domain 1 CLQ99_RS02920 PF03725 3' exoribonuclease family, domain 2 CLQ99_RS02925 PF07719 Tetratricopeptide repeat CLQ99_RS02925 PF13181 Tetratricopeptide repeat CLQ99_RS02935 PF12343 Cold shock protein DEAD box A CLQ99_RS02935 PF00270 DEAD/DEAH box helicase CLQ99_RS02935 PF03880 DbpA RNA binding domain CLQ99_RS02935 PF00271 Helicase conserved C-terminal domain CLQ99_RS02940 PF03222 Tryptophan/tyrosine permease family CLQ99_RS02945 PF00296 Luciferase-like monooxygenase CLQ99_RS02950 PF01136 Peptidase family U32 CLQ99_RS02955 PF01136 Peptidase family U32 CLQ99_RS02960 PF02036 SCP-2 sterol transfer family CLQ99_RS02965 PF13508 Acetyltransferase (GNAT) domain CLQ99_RS02970 PF01541 GIY-YIG catalytic domain CLQ99_RS02980 PF01965 DJ-1/PfpI family CLQ99_RS02985 PF13460 NAD(P)H-binding CLQ99_RS02990 PF03773 Predicted permease CLQ99_RS02995 PF04972 BON domain CLQ99_RS03000 PF13580 SIS domain CLQ99_RS03005 PF02021 Uncharacterised protein family UPF0102 CLQ99_RS03010 PF04348 LppC putative lipoprotein CLQ99_RS03015 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLQ99_RS03020 PF13784 Fic/DOC family N-terminal CLQ99_RS03020 PF02661 Fic/DOC family CLQ99_RS03025 PF08220 DeoR-like helix-turn-helix domain CLQ99_RS03030 PF08240 Alcohol dehydrogenase GroES-like domain CLQ99_RS03030 PF00107 Zinc-binding dehydrogenase CLQ99_RS03035 PF03611 PTS system sugar-specific permease component CLQ99_RS03040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ99_RS03045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ99_RS03050 PF08013 Tagatose 6 phosphate kinase CLQ99_RS03055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ99_RS03055 PF00381 PTS HPr component phosphorylation site CLQ99_RS03060 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ99_RS03060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ99_RS03065 PF00294 pfkB family carbohydrate kinase CLQ99_RS03070 PF01116 Fructose-bisphosphate aldolase class-II CLQ99_RS03075 PF08220 DeoR-like helix-turn-helix domain CLQ99_RS03075 PF00455 DeoR C terminal sensor domain CLQ99_RS03080 PF00294 pfkB family carbohydrate kinase CLQ99_RS03085 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CLQ99_RS03085 PF08666 SAF domain CLQ99_RS03095 PF07690 Major Facilitator Superfamily CLQ99_RS03100 PF03328 HpcH/HpaI aldolase/citrate lyase family CLQ99_RS03105 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CLQ99_RS03105 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CLQ99_RS03110 PF02595 Glycerate kinase family CLQ99_RS03130 PF02678 Pirin CLQ99_RS03130 PF17954 Quercetinase C-terminal cupin domain CLQ99_RS03135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS03135 PF03466 LysR substrate binding domain CLQ99_RS03140 PF05656 Protein of unknown function (DUF805) CLQ99_RS03145 PF13409 Glutathione S-transferase, N-terminal domain CLQ99_RS03150 PF07681 DoxX CLQ99_RS03155 PF13997 YqjK-like protein CLQ99_RS03160 PF07332 Putative Actinobacterial Holin-X, holin superfamily III CLQ99_RS03165 PF05957 Bacterial protein of unknown function (DUF883) CLQ99_RS03170 PF06476 Protein of unknown function (DUF1090) CLQ99_RS03175 PF13721 SecD export protein N-terminal TM region CLQ99_RS03180 PF09335 SNARE associated Golgi protein CLQ99_RS03185 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS03185 PF07729 FCD domain CLQ99_RS03190 PF07690 Major Facilitator Superfamily CLQ99_RS03195 PF02614 Glucuronate isomerase CLQ99_RS03200 PF08666 SAF domain CLQ99_RS03200 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CLQ99_RS03205 PF10688 Bacterial inner membrane protein CLQ99_RS03210 PF00375 Sodium:dicarboxylate symporter family CLQ99_RS03215 PF03741 Integral membrane protein TerC family CLQ99_RS03220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ99_RS03225 PF01863 Protein of unknown function DUF45 CLQ99_RS03240 PF05175 Methyltransferase small domain CLQ99_RS03245 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLQ99_RS03245 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ99_RS03250 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ99_RS03250 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ99_RS03255 PF04198 Putative sugar-binding domain CLQ99_RS03260 PF00005 ABC transporter CLQ99_RS03265 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS03270 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS03275 PF13407 Periplasmic binding protein domain CLQ99_RS03280 PF01791 DeoC/LacD family aldolase CLQ99_RS03285 PF03992 Antibiotic biosynthesis monooxygenase CLQ99_RS03290 PF00202 Aminotransferase class-III CLQ99_RS03295 PF03551 Transcriptional regulator PadR-like family CLQ99_RS03300 PF08021 Siderophore-interacting FAD-binding domain CLQ99_RS03300 PF04954 Siderophore-interacting protein CLQ99_RS03305 PF02733 Dak1 domain CLQ99_RS03305 PF02734 DAK2 domain CLQ99_RS03310 PF03610 PTS system fructose IIA component CLQ99_RS03310 PF00391 PEP-utilising enzyme, mobile domain CLQ99_RS03310 PF00381 PTS HPr component phosphorylation site CLQ99_RS03310 PF05524 PEP-utilising enzyme, N-terminal CLQ99_RS03315 PF02734 DAK2 domain CLQ99_RS03320 PF02733 Dak1 domain CLQ99_RS03340 PF00465 Iron-containing alcohol dehydrogenase CLQ99_RS03345 PF00989 PAS fold CLQ99_RS03345 PF02954 Bacterial regulatory protein, Fis family CLQ99_RS03345 PF00158 Sigma-54 interaction domain CLQ99_RS03350 PF01923 Cobalamin adenosyltransferase CLQ99_RS03355 PF02288 Dehydratase medium subunit CLQ99_RS03360 PF00465 Iron-containing alcohol dehydrogenase CLQ99_RS03365 PF03928 Haem-degrading CLQ99_RS03370 PF02286 Dehydratase large subunit CLQ99_RS03375 PF02288 Dehydratase medium subunit CLQ99_RS03380 PF02287 Dehydratase small subunit CLQ99_RS03385 PF08841 Diol dehydratase reactivase ATPase-like domain CLQ99_RS03385 PF18427 DD-reactivating factor swiveling domain CLQ99_RS03390 PF00230 Major intrinsic protein CLQ99_RS03395 PF06411 HdeA/HdeB family CLQ99_RS03400 PF01609 Transposase DDE domain CLQ99_RS03400 PF05598 Transposase domain (DUF772) CLQ99_RS03405 PF03729 Short repeat of unknown function (DUF308) CLQ99_RS03410 PF10938 YfdX protein CLQ99_RS03415 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ99_RS03415 PF00072 Response regulator receiver domain CLQ99_RS03415 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS03415 PF01627 Hpt domain CLQ99_RS03415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS03420 PF00196 Bacterial regulatory proteins, luxR family CLQ99_RS03420 PF00072 Response regulator receiver domain CLQ99_RS03440 PF03167 Uracil DNA glycosylase superfamily CLQ99_RS03445 PF00140 Sigma-70 factor, region 1.2 CLQ99_RS03445 PF04539 Sigma-70 region 3 CLQ99_RS03445 PF03979 Sigma-70 factor, region 1.1 CLQ99_RS03445 PF04546 Sigma-70, non-essential region CLQ99_RS03445 PF04545 Sigma-70, region 4 CLQ99_RS03445 PF04542 Sigma-70 region 2 CLQ99_RS03450 PF01807 CHC2 zinc finger CLQ99_RS03450 PF08278 DNA primase DnaG DnaB-binding CLQ99_RS03450 PF08275 DNA primase catalytic core, N-terminal domain CLQ99_RS03450 PF10410 DnaB-helicase binding domain of primase CLQ99_RS03455 PF01165 Ribosomal protein S21 CLQ99_RS03460 PF00814 Glycoprotease family CLQ99_RS03470 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLQ99_RS03475 PF01730 UreF CLQ99_RS03480 PF05194 UreE urease accessory protein, C-terminal domain CLQ99_RS03480 PF02814 UreE urease accessory protein, N-terminal domain CLQ99_RS03485 PF02371 Transposase IS116/IS110/IS902 family CLQ99_RS03485 PF01548 Transposase CLQ99_RS03495 PF00699 Urease beta subunit CLQ99_RS03500 PF00547 Urease, gamma subunit CLQ99_RS03505 PF01774 UreD urease accessory protein CLQ99_RS03515 PF02660 Glycerol-3-phosphate acyltransferase CLQ99_RS03520 PF02152 Dihydroneopterin aldolase CLQ99_RS03525 PF02673 Bacitracin resistance protein BacA CLQ99_RS03530 PF12627 Probable RNA and SrmB- binding site of polymerase A CLQ99_RS03530 PF01743 Poly A polymerase head domain CLQ99_RS03530 PF01966 HD domain CLQ99_RS03535 PF08239 Bacterial SH3 domain CLQ99_RS03540 PF01928 CYTH domain CLQ99_RS03545 PF08335 GlnD PII-uridylyltransferase CLQ99_RS03545 PF03710 Glutamate-ammonia ligase adenylyltransferase CLQ99_RS03550 PF01467 Cytidylyltransferase-like CLQ99_RS03550 PF00294 pfkB family carbohydrate kinase CLQ99_RS03555 PF08971 Glycogen synthesis protein CLQ99_RS03560 PF04380 Membrane fusogenic activity CLQ99_RS03565 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CLQ99_RS03570 PF02535 ZIP Zinc transporter CLQ99_RS03575 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CLQ99_RS03580 PF03738 Glutathionylspermidine synthase preATP-grasp CLQ99_RS03585 PF06693 Protein of unknown function (DUF1190) CLQ99_RS03590 PF02321 Outer membrane efflux protein CLQ99_RS03595 PF00293 NUDIX domain CLQ99_RS03600 PF06853 Protein of unknown function (DUF1249) CLQ99_RS03605 PF00149 Calcineurin-like phosphoesterase CLQ99_RS03610 PF05728 Uncharacterised protein family (UPF0227) CLQ99_RS03615 PF01751 Toprim domain CLQ99_RS03615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS03615 PF00986 DNA gyrase B subunit, carboxyl terminus CLQ99_RS03615 PF00204 DNA gyrase B CLQ99_RS03620 PF03992 Antibiotic biosynthesis monooxygenase CLQ99_RS03625 PF02525 Flavodoxin-like fold CLQ99_RS03630 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS03630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS03630 PF08521 Two-component sensor kinase N-terminal CLQ99_RS03635 PF00072 Response regulator receiver domain CLQ99_RS03635 PF00486 Transcriptional regulatory protein, C terminal CLQ99_RS03640 PF04076 Bacterial OB fold (BOF) protein CLQ99_RS03645 PF06445 GyrI-like small molecule binding domain CLQ99_RS03650 PF00521 DNA gyrase/topoisomerase IV, subunit A CLQ99_RS03650 PF03989 DNA gyrase C-terminal domain, beta-propeller CLQ99_RS03655 PF01553 Acyltransferase CLQ99_RS03660 PF07731 Multicopper oxidase CLQ99_RS03660 PF00394 Multicopper oxidase CLQ99_RS03660 PF07732 Multicopper oxidase CLQ99_RS03665 PF04055 Radical SAM superfamily CLQ99_RS03665 PF11842 Domain of unknown function (DUF3362) CLQ99_RS03665 PF08497 Radical SAM N-terminal CLQ99_RS03675 PF00248 Aldo/keto reductase family CLQ99_RS03680 PF00465 Iron-containing alcohol dehydrogenase CLQ99_RS03685 PF06719 AraC-type transcriptional regulator N-terminus CLQ99_RS03685 PF12833 Helix-turn-helix domain CLQ99_RS03690 PF09335 SNARE associated Golgi protein CLQ99_RS03695 PF01053 Cys/Met metabolism PLP-dependent enzyme CLQ99_RS03700 PF01618 MotA/TolQ/ExbB proton channel family CLQ99_RS03705 PF02472 Biopolymer transport protein ExbD/TolR CLQ99_RS03715 PF04616 Glycosyl hydrolases family 43 CLQ99_RS03715 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CLQ99_RS03720 PF03350 Uncharacterized protein family, UPF0114 CLQ99_RS03725 PF01738 Dienelactone hydrolase family CLQ99_RS03730 PF11115 Protein of unknown function (DUF2623) CLQ99_RS03735 PF02798 Glutathione S-transferase, N-terminal domain CLQ99_RS03745 PF03738 Glutathionylspermidine synthase preATP-grasp CLQ99_RS03745 PF05257 CHAP domain CLQ99_RS03750 PF00155 Aminotransferase class I and II CLQ99_RS03770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS03770 PF03466 LysR substrate binding domain CLQ99_RS03775 PF01053 Cys/Met metabolism PLP-dependent enzyme CLQ99_RS03780 PF00291 Pyridoxal-phosphate dependent enzyme CLQ99_RS03780 PF00571 CBS domain CLQ99_RS03810 PF13614 AAA domain CLQ99_RS03820 PF00772 DnaB-like helicase N terminal domain CLQ99_RS03820 PF03796 DnaB-like helicase C terminal domain CLQ99_RS04035 PF13693 Winged helix-turn-helix DNA-binding CLQ99_RS04045 PF00313 'Cold-shock' DNA-binding domain CLQ99_RS04050 PF13693 Winged helix-turn-helix DNA-binding CLQ99_RS04070 PF05598 Transposase domain (DUF772) CLQ99_RS04070 PF01609 Transposase DDE domain CLQ99_RS04090 PF03230 Antirestriction protein CLQ99_RS04105 PF08401 Domain of unknown function (DUF1738) CLQ99_RS04105 PF18818 Metallopeptidase superfamily domain CLQ99_RS04105 PF13362 Toprim domain CLQ99_RS04115 PF00589 Phage integrase family CLQ99_RS04125 PF04474 Protein of unknown function (DUF554) CLQ99_RS04135 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CLQ99_RS04135 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CLQ99_RS04135 PF01276 Orn/Lys/Arg decarboxylase, major domain CLQ99_RS04140 PF03825 Nucleoside H+ symporter CLQ99_RS04145 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain CLQ99_RS04145 PF01464 Transglycosylase SLT domain CLQ99_RS04150 PF04362 Bacterial Fe(2+) trafficking CLQ99_RS04155 PF10576 Iron-sulfur binding domain of endonuclease III CLQ99_RS04155 PF00633 Helix-hairpin-helix motif CLQ99_RS04155 PF00730 HhH-GPD superfamily base excision DNA repair protein CLQ99_RS04155 PF14815 NUDIX domain CLQ99_RS04160 PF02390 Putative methyltransferase CLQ99_RS04165 PF04320 Protein with unknown function (DUF469) CLQ99_RS04170 PF11101 Protein of unknown function (DUF2884) CLQ99_RS04175 PF04055 Radical SAM superfamily CLQ99_RS04175 PF06969 HemN C-terminal domain CLQ99_RS04180 PF01725 Ham1 family CLQ99_RS04185 PF02594 Uncharacterised ACR, YggU family COG1872 CLQ99_RS04190 PF02325 YGGT family CLQ99_RS04195 PF01168 Alanine racemase, N-terminal domain CLQ99_RS04200 PF00437 Type II/IV secretion system protein CLQ99_RS04205 PF00196 Bacterial regulatory proteins, luxR family CLQ99_RS04210 PF03652 Holliday junction resolvase CLQ99_RS04215 PF02622 Uncharacterized ACR, COG1678 CLQ99_RS04220 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CLQ99_RS04220 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CLQ99_RS04225 PF04452 RNA methyltransferase CLQ99_RS04230 PF04231 Endonuclease I CLQ99_RS04235 PF17283 SprT-like zinc ribbon domain CLQ99_RS04235 PF10263 SprT-like family CLQ99_RS04240 PF00083 Sugar (and other) transporter CLQ99_RS04245 PF02773 S-adenosylmethionine synthetase, C-terminal domain CLQ99_RS04245 PF02772 S-adenosylmethionine synthetase, central domain CLQ99_RS04245 PF00438 S-adenosylmethionine synthetase, N-terminal domain CLQ99_RS04260 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CLQ99_RS04260 PF17810 Arginine decarboxylase helical bundle domain CLQ99_RS04260 PF17944 Arginine decarboxylase C-terminal helical extension CLQ99_RS04265 PF00491 Arginase family CLQ99_RS04280 PF00355 Rieske [2Fe-2S] domain CLQ99_RS04290 PF00355 Rieske [2Fe-2S] domain CLQ99_RS04300 PF01614 Bacterial transcriptional regulator CLQ99_RS04300 PF09339 IclR helix-turn-helix domain CLQ99_RS04310 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ99_RS04310 PF14759 Reductase C-terminal CLQ99_RS04325 PF12697 Alpha/beta hydrolase family CLQ99_RS04335 PF01958 Domain of unknown function DUF108 CLQ99_RS04335 PF03447 Homoserine dehydrogenase, NAD binding domain CLQ99_RS04340 PF00171 Aldehyde dehydrogenase family CLQ99_RS04345 PF00205 Thiamine pyrophosphate enzyme, central domain CLQ99_RS04345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ99_RS04345 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLQ99_RS04350 PF03573 outer membrane porin, OprD family CLQ99_RS04360 PF01609 Transposase DDE domain CLQ99_RS04360 PF05598 Transposase domain (DUF772) CLQ99_RS04365 PF01435 Peptidase family M48 CLQ99_RS04370 PF02780 Transketolase, C-terminal domain CLQ99_RS04370 PF02779 Transketolase, pyrimidine binding domain CLQ99_RS04370 PF00456 Transketolase, thiamine diphosphate binding domain CLQ99_RS04375 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CLQ99_RS04375 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLQ99_RS04380 PF00162 Phosphoglycerate kinase CLQ99_RS04385 PF01116 Fructose-bisphosphate aldolase class-II CLQ99_RS04390 PF00924 Mechanosensitive ion channel CLQ99_RS04390 PF05552 Conserved TM helix CLQ99_RS04395 PF01810 LysE type translocator CLQ99_RS04400 PF04402 Protein of unknown function (DUF541) CLQ99_RS04405 PF03466 LysR substrate binding domain CLQ99_RS04405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS04410 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CLQ99_RS04415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLQ99_RS04415 PF01842 ACT domain CLQ99_RS04415 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLQ99_RS04420 PF01812 5-formyltetrahydrofolate cyclo-ligase family CLQ99_RS04430 PF05164 Cell division protein ZapA CLQ99_RS04435 PF03695 Uncharacterised protein family (UPF0149) CLQ99_RS04440 PF05195 Aminopeptidase P, N-terminal domain CLQ99_RS04440 PF00557 Metallopeptidase family M24 CLQ99_RS04445 PF01494 FAD binding domain CLQ99_RS04450 PF01494 FAD binding domain CLQ99_RS04455 PF01571 Aminomethyltransferase folate-binding domain CLQ99_RS04455 PF08669 Glycine cleavage T-protein C-terminal barrel domain CLQ99_RS04460 PF01597 Glycine cleavage H-protein CLQ99_RS04465 PF02347 Glycine cleavage system P-protein CLQ99_RS04475 PF00578 AhpC/TSA family CLQ99_RS04495 PF00232 Glycosyl hydrolase family 1 CLQ99_RS04500 PF01418 Helix-turn-helix domain, rpiR family CLQ99_RS04500 PF01380 SIS domain CLQ99_RS04505 PF04266 ASCH domain CLQ99_RS04510 PF03006 Haemolysin-III related CLQ99_RS04515 PF01571 Aminomethyltransferase folate-binding domain CLQ99_RS04520 PF03937 Flavinator of succinate dehydrogenase CLQ99_RS04525 PF07254 Membrane-bound toxin component of toxin-antitoxin system CLQ99_RS04530 PF00258 Flavodoxin CLQ99_RS04535 PF00589 Phage integrase family CLQ99_RS04535 PF02899 Phage integrase, N-terminal SAM-like domain CLQ99_RS04540 PF13098 Thioredoxin-like domain CLQ99_RS04540 PF10411 Disulfide bond isomerase protein N-terminus CLQ99_RS04545 PF02272 DHHA1 domain CLQ99_RS04545 PF17768 RecJ OB domain CLQ99_RS04545 PF01368 DHH family CLQ99_RS04555 PF01336 OB-fold nucleic acid binding domain CLQ99_RS04555 PF00152 tRNA synthetases class II (D, K and N) CLQ99_RS04560 PF00293 NUDIX domain CLQ99_RS04565 PF01551 Peptidase family M23 CLQ99_RS04565 PF01476 LysM domain CLQ99_RS04575 PF07690 Major Facilitator Superfamily CLQ99_RS04580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS04580 PF03466 LysR substrate binding domain CLQ99_RS04590 PF00248 Aldo/keto reductase family CLQ99_RS04595 PF02525 Flavodoxin-like fold CLQ99_RS04605 PF03466 LysR substrate binding domain CLQ99_RS04605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS04620 PF01022 Bacterial regulatory protein, arsR family CLQ99_RS04625 PF02040 Arsenical pump membrane protein CLQ99_RS04630 PF03960 ArsC family CLQ99_RS04635 PF00854 POT family CLQ99_RS04640 PF08986 Domain of unknown function (DUF1889) CLQ99_RS04645 PF02321 Outer membrane efflux protein CLQ99_RS04650 PF04632 Fusaric acid resistance protein family CLQ99_RS04655 PF00529 HlyD membrane-fusion protein of T1SS CLQ99_RS04655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ99_RS04660 PF17090 Uncharacterised protein family CLQ99_RS04665 PF06902 Divergent 4Fe-4S mono-cluster CLQ99_RS04670 PF14542 GCN5-related N-acetyl-transferase CLQ99_RS04680 PF00419 Fimbrial protein CLQ99_RS04680 PF09160 FimH, mannose binding CLQ99_RS04690 PF00419 Fimbrial protein CLQ99_RS04695 PF13954 PapC N-terminal domain CLQ99_RS04695 PF00577 Outer membrane usher protein CLQ99_RS04695 PF13953 PapC C-terminal domain CLQ99_RS04700 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CLQ99_RS04700 PF02753 Pili assembly chaperone PapD, C-terminal domain CLQ99_RS04705 PF00419 Fimbrial protein CLQ99_RS04710 PF00419 Fimbrial protein CLQ99_RS04715 PF00589 Phage integrase family CLQ99_RS04720 PF00589 Phage integrase family CLQ99_RS04730 PF03824 High-affinity nickel-transport protein CLQ99_RS04735 PF01047 MarR family CLQ99_RS04740 PF00892 EamA-like transporter family CLQ99_RS04750 PF01609 Transposase DDE domain CLQ99_RS04750 PF05598 Transposase domain (DUF772) CLQ99_RS04755 PF00419 Fimbrial protein CLQ99_RS04760 PF02753 Pili assembly chaperone PapD, C-terminal domain CLQ99_RS04760 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CLQ99_RS04765 PF13953 PapC C-terminal domain CLQ99_RS04765 PF13954 PapC N-terminal domain CLQ99_RS04765 PF00577 Outer membrane usher protein CLQ99_RS04770 PF00419 Fimbrial protein CLQ99_RS04785 PF00196 Bacterial regulatory proteins, luxR family CLQ99_RS04785 PF00072 Response regulator receiver domain CLQ99_RS04795 PF00248 Aldo/keto reductase family CLQ99_RS04800 PF03222 Tryptophan/tyrosine permease family CLQ99_RS04810 PF03466 LysR substrate binding domain CLQ99_RS04810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS04815 PF00108 Thiolase, N-terminal domain CLQ99_RS04815 PF02803 Thiolase, C-terminal domain CLQ99_RS04820 PF06178 Oligogalacturonate-specific porin protein (KdgM) CLQ99_RS04825 PF14583 Oligogalacturonate lyase CLQ99_RS04835 PF00083 Sugar (and other) transporter CLQ99_RS04840 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS04840 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CLQ99_RS04845 PF01306 LacY proton/sugar symporter CLQ99_RS04850 PF00251 Glycosyl hydrolases family 32 N-terminal domain CLQ99_RS04850 PF08244 Glycosyl hydrolases family 32 C terminal CLQ99_RS04865 PF17912 MalK OB fold domain CLQ99_RS04865 PF00005 ABC transporter CLQ99_RS04870 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS04875 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS04880 PF16867 Dimethlysulfonioproprionate lyase CLQ99_RS04885 PF01177 Asp/Glu/Hydantoin racemase CLQ99_RS04890 PF03466 LysR substrate binding domain CLQ99_RS04890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS04895 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CLQ99_RS04895 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CLQ99_RS04900 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS04905 PF02378 Phosphotransferase system, EIIC CLQ99_RS04910 PF00232 Glycosyl hydrolase family 1 CLQ99_RS04915 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS04915 PF07729 FCD domain CLQ99_RS04925 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS04940 PF01553 Acyltransferase CLQ99_RS04940 PF00501 AMP-binding enzyme CLQ99_RS04945 PF07690 Major Facilitator Superfamily CLQ99_RS04950 PF00248 Aldo/keto reductase family CLQ99_RS04955 PF06004 Bacterial protein of unknown function (DUF903) CLQ99_RS04960 PF03741 Integral membrane protein TerC family CLQ99_RS04965 PF02976 DNA mismatch repair enzyme MutH CLQ99_RS04975 PF00293 NUDIX domain CLQ99_RS04980 PF05524 PEP-utilising enzyme, N-terminal CLQ99_RS04980 PF02896 PEP-utilising enzyme, TIM barrel domain CLQ99_RS04980 PF01590 GAF domain CLQ99_RS04980 PF00391 PEP-utilising enzyme, mobile domain CLQ99_RS04985 PF01790 Prolipoprotein diacylglyceryl transferase CLQ99_RS04990 PF00303 Thymidylate synthase CLQ99_RS04995 PF07963 Prokaryotic N-terminal methylation motif CLQ99_RS05000 PF07963 Prokaryotic N-terminal methylation motif CLQ99_RS05005 PF10713 Protein of unknown function (DUF2509) CLQ99_RS05010 PF12528 Type II secretion prepilin peptidase dependent protein C CLQ99_RS05010 PF07963 Prokaryotic N-terminal methylation motif CLQ99_RS05015 PF17946 RecC C-terminal domain CLQ99_RS05020 PF05193 Peptidase M16 inactive domain CLQ99_RS05020 PF16187 Middle or third domain of peptidase_M16 CLQ99_RS05020 PF00675 Insulinase (Peptidase family M16) CLQ99_RS05025 PF12705 PD-(D/E)XK nuclease superfamily CLQ99_RS05025 PF00580 UvrD/REP helicase N-terminal domain CLQ99_RS05025 PF13361 UvrD-like helicase C-terminal domain CLQ99_RS05030 PF13538 UvrD-like helicase C-terminal domain CLQ99_RS05040 PF00696 Amino acid kinase family CLQ99_RS05040 PF00583 Acetyltransferase (GNAT) family CLQ99_RS05045 PF11741 AMIN domain CLQ99_RS05045 PF01520 N-acetylmuramoyl-L-alanine amidase CLQ99_RS05050 PF00155 Aminotransferase class I and II CLQ99_RS05055 PF00288 GHMP kinases N terminal domain CLQ99_RS05060 PF00871 Acetokinase family CLQ99_RS05065 PF10662 Ethanolamine utilisation - propanediol utilisation CLQ99_RS05070 PF00936 BMC domain CLQ99_RS05080 PF10531 SLBB domain CLQ99_RS05080 PF13375 RnfC Barrel sandwich hybrid domain CLQ99_RS05080 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLQ99_RS05080 PF13237 4Fe-4S dicluster domain CLQ99_RS05085 PF00171 Aldehyde dehydrogenase family CLQ99_RS05085 PF00465 Iron-containing alcohol dehydrogenase CLQ99_RS05090 PF00171 Aldehyde dehydrogenase family CLQ99_RS05095 PF01923 Cobalamin adenosyltransferase CLQ99_RS05100 PF03319 Ethanolamine utilisation protein EutN/carboxysome CLQ99_RS05110 PF06130 Phosphate propanoyltransferase CLQ99_RS05115 PF00936 BMC domain CLQ99_RS05120 PF00936 BMC domain CLQ99_RS05130 PF18427 DD-reactivating factor swiveling domain CLQ99_RS05130 PF08841 Diol dehydratase reactivase ATPase-like domain CLQ99_RS05135 PF02287 Dehydratase small subunit CLQ99_RS05140 PF02288 Dehydratase medium subunit CLQ99_RS05145 PF02286 Dehydratase large subunit CLQ99_RS05150 PF00936 BMC domain CLQ99_RS05155 PF00936 BMC domain CLQ99_RS05160 PF00230 Major intrinsic protein CLQ99_RS05165 PF10114 Sensory domain found in PocR CLQ99_RS05165 PF12833 Helix-turn-helix domain CLQ99_RS05170 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CLQ99_RS05170 PF07685 CobB/CobQ-like glutamine amidotransferase domain CLQ99_RS05175 PF03186 CobD/Cbib protein CLQ99_RS05180 PF02570 Precorrin-8X methylmutase CLQ99_RS05185 PF01888 CbiD CLQ99_RS05190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLQ99_RS05195 PF05175 Methyltransferase small domain CLQ99_RS05200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLQ99_RS05205 PF01890 Cobalamin synthesis G C-terminus CLQ99_RS05205 PF11761 Cobalamin biosynthesis central region CLQ99_RS05205 PF11760 Cobalamin synthesis G N-terminal CLQ99_RS05210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLQ99_RS05215 PF02571 Precorrin-6x reductase CbiJ/CobK CLQ99_RS05220 PF06180 Cobalt chelatase (CbiK) CLQ99_RS05225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLQ99_RS05230 PF01891 Cobalt uptake substrate-specific transmembrane region CLQ99_RS05235 PF02553 Cobalt transport protein component CbiN CLQ99_RS05240 PF02361 Cobalt transport protein CLQ99_RS05245 PF00005 ABC transporter CLQ99_RS05250 PF07685 CobB/CobQ-like glutamine amidotransferase domain CLQ99_RS05255 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CLQ99_RS05260 PF02277 Phosphoribosyltransferase CLQ99_RS05280 PF06725 3D domain CLQ99_RS05280 PF03562 MltA specific insert domain CLQ99_RS05285 PF00899 ThiF family CLQ99_RS05290 PF02657 Fe-S metabolism associated domain CLQ99_RS05295 PF00266 Aminotransferase class-V CLQ99_RS05300 PF06004 Bacterial protein of unknown function (DUF903) CLQ99_RS05305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS05305 PF03466 LysR substrate binding domain CLQ99_RS05310 PF04241 Protein of unknown function (DUF423) CLQ99_RS05315 PF01728 FtsJ-like methyltransferase CLQ99_RS05315 PF18125 RlmM ferredoxin-like domain CLQ99_RS05320 PF08220 DeoR-like helix-turn-helix domain CLQ99_RS05320 PF00455 DeoR C terminal sensor domain CLQ99_RS05325 PF05025 RbsD / FucU transport protein family CLQ99_RS05330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ99_RS05330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ99_RS05335 PF02952 L-fucose isomerase, C-terminal domain CLQ99_RS05335 PF07882 L-fucose isomerase, second N-terminal domain CLQ99_RS05335 PF07881 L-fucose isomerase, first N-terminal domain CLQ99_RS05340 PF07690 Major Facilitator Superfamily CLQ99_RS05345 PF00596 Class II Aldolase and Adducin N-terminal domain CLQ99_RS05350 PF00465 Iron-containing alcohol dehydrogenase CLQ99_RS05355 PF01367 5'-3' exonuclease, C-terminal SAM fold CLQ99_RS05355 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CLQ99_RS05360 PF00158 Sigma-54 interaction domain CLQ99_RS05365 PF00296 Luciferase-like monooxygenase CLQ99_RS05375 PF00296 Luciferase-like monooxygenase CLQ99_RS05380 PF00005 ABC transporter CLQ99_RS05385 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS05390 PF03180 NLPA lipoprotein CLQ99_RS05400 PF07690 Major Facilitator Superfamily CLQ99_RS05410 PF09084 NMT1/THI5 like CLQ99_RS05415 PF03313 Serine dehydratase alpha chain CLQ99_RS05415 PF03315 Serine dehydratase beta chain CLQ99_RS05425 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases CLQ99_RS05425 PF03641 Possible lysine decarboxylase CLQ99_RS05425 PF11892 Domain of unknown function (DUF3412) CLQ99_RS05430 PF14489 QueF-like protein CLQ99_RS05430 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CLQ99_RS05435 PF07348 Syd protein (SUKH-2) CLQ99_RS05440 PF04287 tRNA pseudouridine synthase C CLQ99_RS05445 PF00849 RNA pseudouridylate synthase CLQ99_RS05450 PF00258 Flavodoxin CLQ99_RS05455 PF07690 Major Facilitator Superfamily CLQ99_RS05460 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CLQ99_RS05460 PF13378 Enolase C-terminal domain-like CLQ99_RS05465 PF13378 Enolase C-terminal domain-like CLQ99_RS05470 PF02595 Glycerate kinase family CLQ99_RS05480 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CLQ99_RS05480 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS05480 PF01627 Hpt domain CLQ99_RS05480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS05480 PF00672 HAMP domain CLQ99_RS05480 PF00072 Response regulator receiver domain CLQ99_RS05485 PF01938 TRAM domain CLQ99_RS05485 PF05958 tRNA (Uracil-5-)-methyltransferase CLQ99_RS05490 PF02824 TGS domain CLQ99_RS05490 PF04607 Region found in RelA / SpoT proteins CLQ99_RS05490 PF13291 ACT domain CLQ99_RS05495 PF03819 MazG nucleotide pyrophosphohydrolase domain CLQ99_RS05500 PF06418 CTP synthase N-terminus CLQ99_RS05500 PF00117 Glutamine amidotransferase class-I CLQ99_RS05505 PF00113 Enolase, C-terminal TIM barrel domain CLQ99_RS05505 PF03952 Enolase, N-terminal domain CLQ99_RS05515 PF04055 Radical SAM superfamily CLQ99_RS05520 PF01242 6-pyruvoyl tetrahydropterin synthase CLQ99_RS05525 PF00175 Oxidoreductase NAD-binding domain CLQ99_RS05525 PF00667 FAD binding domain CLQ99_RS05525 PF00258 Flavodoxin CLQ99_RS05530 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CLQ99_RS05530 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CLQ99_RS05535 PF01507 Phosphoadenosine phosphosulfate reductase family CLQ99_RS05540 PF04389 Peptidase family M28 CLQ99_RS05545 PF14824 Sirohaem biosynthesis protein central CLQ99_RS05545 PF10414 Sirohaem synthase dimerisation region CLQ99_RS05545 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CLQ99_RS05550 PF01507 Phosphoadenosine phosphosulfate reductase family CLQ99_RS05555 PF00009 Elongation factor Tu GTP binding domain CLQ99_RS05565 PF12084 Protein of unknown function (DUF3561) CLQ99_RS05570 PF04977 Septum formation initiator CLQ99_RS05575 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CLQ99_RS05580 PF02542 YgbB family CLQ99_RS05585 PF01142 tRNA pseudouridine synthase D (TruD) CLQ99_RS05590 PF01975 Survival protein SurE CLQ99_RS05600 PF01476 LysM domain CLQ99_RS05600 PF01551 Peptidase family M23 CLQ99_RS05605 PF04539 Sigma-70 region 3 CLQ99_RS05605 PF00140 Sigma-70 factor, region 1.2 CLQ99_RS05605 PF04542 Sigma-70 region 2 CLQ99_RS05605 PF04545 Sigma-70, region 4 CLQ99_RS05615 PF07690 Major Facilitator Superfamily CLQ99_RS05620 PF03466 LysR substrate binding domain CLQ99_RS05620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS05625 PF01047 MarR family CLQ99_RS05630 PF02441 Flavoprotein CLQ99_RS05635 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CLQ99_RS05650 PF01848 Hok/gef family CLQ99_RS05655 PF05192 MutS domain III CLQ99_RS05655 PF05190 MutS family domain IV CLQ99_RS05655 PF00488 MutS domain V CLQ99_RS05655 PF01624 MutS domain I CLQ99_RS05655 PF05188 MutS domain II CLQ99_RS05675 PF00005 ABC transporter CLQ99_RS05680 PF01032 FecCD transport family CLQ99_RS05685 PF01497 Periplasmic binding protein CLQ99_RS05690 PF05171 Haemin-degrading HemS.ChuX domain CLQ99_RS05695 PF07715 TonB-dependent Receptor Plug Domain CLQ99_RS05695 PF00593 TonB dependent receptor CLQ99_RS05705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLQ99_RS05705 PF00205 Thiamine pyrophosphate enzyme, central domain CLQ99_RS05705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ99_RS05710 PF03547 Membrane transport protein CLQ99_RS05720 PF11756 Nitrous oxide-stimulated promoter CLQ99_RS05725 PF00950 ABC 3 transport family CLQ99_RS05730 PF00950 ABC 3 transport family CLQ99_RS05735 PF00005 ABC transporter CLQ99_RS05740 PF01297 Zinc-uptake complex component A periplasmic CLQ99_RS05745 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS05750 PF00480 ROK family CLQ99_RS05755 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CLQ99_RS05760 PF02378 Phosphotransferase system, EIIC CLQ99_RS05765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ99_RS05770 PF02378 Phosphotransferase system, EIIC CLQ99_RS05780 PF02264 LamB porin CLQ99_RS05790 PF00232 Glycosyl hydrolase family 1 CLQ99_RS05795 PF00158 Sigma-54 interaction domain CLQ99_RS05795 PF02954 Bacterial regulatory protein, Fis family CLQ99_RS05795 PF01590 GAF domain CLQ99_RS05800 PF00586 AIR synthase related protein, N-terminal domain CLQ99_RS05800 PF02769 AIR synthase related protein, C-terminal domain CLQ99_RS05805 PF01924 Hydrogenase formation hypA family CLQ99_RS05810 PF01455 HupF/HypC family CLQ99_RS05815 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLQ99_RS05820 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CLQ99_RS05825 PF11046 Transcriptional repressor of hyc and hyp operons CLQ99_RS05835 PF13247 4Fe-4S dicluster domain CLQ99_RS05840 PF00361 Proton-conducting membrane transporter CLQ99_RS05845 PF00146 NADH dehydrogenase CLQ99_RS05850 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CLQ99_RS05850 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CLQ99_RS05850 PF00374 Nickel-dependent hydrogenase CLQ99_RS05855 PF12838 4Fe-4S dicluster domain CLQ99_RS05860 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CLQ99_RS05865 PF07450 Formate hydrogenlyase maturation protein HycH CLQ99_RS05870 PF01750 Hydrogenase maturation protease CLQ99_RS05875 PF08845 Toxin SymE, type I toxin-antitoxin system CLQ99_RS05880 PF00232 Glycosyl hydrolase family 1 CLQ99_RS05885 PF00367 phosphotransferase system, EIIB CLQ99_RS05885 PF02378 Phosphotransferase system, EIIC CLQ99_RS05890 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS05895 PF13247 4Fe-4S dicluster domain CLQ99_RS05895 PF12800 4Fe-4S binding domain CLQ99_RS05900 PF17788 HypF Kae1-like domain CLQ99_RS05900 PF07503 HypF finger CLQ99_RS05900 PF01300 Telomere recombination CLQ99_RS05900 PF00708 Acylphosphatase CLQ99_RS05905 PF03824 High-affinity nickel-transport protein CLQ99_RS05910 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ99_RS05910 PF18113 Rubredoxin binding C-terminal domain CLQ99_RS05915 PF00753 Metallo-beta-lactamase superfamily CLQ99_RS05915 PF00258 Flavodoxin CLQ99_RS05915 PF00301 Rubredoxin CLQ99_RS05925 PF01590 GAF domain CLQ99_RS05925 PF00158 Sigma-54 interaction domain CLQ99_RS05930 PF00571 CBS domain CLQ99_RS05930 PF01380 SIS domain CLQ99_RS05935 PF00455 DeoR C terminal sensor domain CLQ99_RS05935 PF08220 DeoR-like helix-turn-helix domain CLQ99_RS05940 PF06923 Glucitol operon activator protein (GutM) CLQ99_RS05945 PF00106 short chain dehydrogenase CLQ99_RS05950 PF03829 PTS system glucitol/sorbitol-specific IIA component CLQ99_RS05955 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CLQ99_RS05955 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CLQ99_RS05960 PF03608 PTS system enzyme II sorbitol-specific factor CLQ99_RS05965 PF13406 Transglycosylase SLT domain CLQ99_RS05975 PF00005 ABC transporter CLQ99_RS05980 PF00950 ABC 3 transport family CLQ99_RS05985 PF01297 Zinc-uptake complex component A periplasmic CLQ99_RS05990 PF02464 Competence-damaged protein CLQ99_RS05995 PF00154 recA bacterial DNA recombination protein CLQ99_RS06000 PF02631 RecX family CLQ99_RS06005 PF02272 DHHA1 domain CLQ99_RS06005 PF01411 tRNA synthetases class II (A) CLQ99_RS06005 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLQ99_RS06015 PF02599 Global regulator protein family CLQ99_RS06045 PF04972 BON domain CLQ99_RS06050 PF13419 Haloacid dehalogenase-like hydrolase CLQ99_RS06055 PF09335 SNARE associated Golgi protein CLQ99_RS06060 PF04262 Glutamate-cysteine ligase CLQ99_RS06065 PF02664 S-Ribosylhomocysteinase (LuxS) CLQ99_RS06070 PF12852 Cupin CLQ99_RS06070 PF12833 Helix-turn-helix domain CLQ99_RS06075 PF08502 LeuA allosteric (dimerisation) domain CLQ99_RS06075 PF00682 HMGL-like CLQ99_RS06080 PF07690 Major Facilitator Superfamily CLQ99_RS06085 PF00529 HlyD membrane-fusion protein of T1SS CLQ99_RS06085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ99_RS06090 PF01047 MarR family CLQ99_RS06095 PF05437 Branched-chain amino acid transport protein (AzlD) CLQ99_RS06100 PF03591 AzlC protein CLQ99_RS06105 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CLQ99_RS06110 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS06115 PF00005 ABC transporter CLQ99_RS06115 PF00571 CBS domain CLQ99_RS06120 PF00268 Ribonucleotide reductase, small chain CLQ99_RS06125 PF00317 Ribonucleotide reductase, all-alpha domain CLQ99_RS06125 PF08343 Ribonucleotide reductase N-terminal CLQ99_RS06125 PF02867 Ribonucleotide reductase, barrel domain CLQ99_RS06130 PF07972 NrdI Flavodoxin like CLQ99_RS06135 PF00462 Glutaredoxin CLQ99_RS06140 PF02627 Carboxymuconolactone decarboxylase family CLQ99_RS06145 PF00155 Aminotransferase class I and II CLQ99_RS06145 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS06150 PF05957 Bacterial protein of unknown function (DUF883) CLQ99_RS06155 PF09400 Protein of unknown function (DUF2002) CLQ99_RS06160 PF06610 L-alanine exporter CLQ99_RS06175 PF00816 H-NS histone family CLQ99_RS06190 PF11127 Protein of unknown function (DUF2892) CLQ99_RS06190 PF00581 Rhodanese-like domain CLQ99_RS06195 PF01022 Bacterial regulatory protein, arsR family CLQ99_RS06200 PF02525 Flavodoxin-like fold CLQ99_RS06205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS06205 PF03466 LysR substrate binding domain CLQ99_RS06210 PF00158 Sigma-54 interaction domain CLQ99_RS06210 PF02954 Bacterial regulatory protein, Fis family CLQ99_RS06210 PF01590 GAF domain CLQ99_RS06215 PF00171 Aldehyde dehydrogenase family CLQ99_RS06220 PF16970 Type-1 fimbrial protein, A CLQ99_RS06225 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CLQ99_RS06225 PF02753 Pili assembly chaperone PapD, C-terminal domain CLQ99_RS06230 PF13953 PapC C-terminal domain CLQ99_RS06230 PF13954 PapC N-terminal domain CLQ99_RS06230 PF00577 Outer membrane usher protein CLQ99_RS06255 PF01609 Transposase DDE domain CLQ99_RS06255 PF05598 Transposase domain (DUF772) CLQ99_RS06260 PF00589 Phage integrase family CLQ99_RS06260 PF02899 Phage integrase, N-terminal SAM-like domain CLQ99_RS06265 PF07022 Bacteriophage CI repressor helix-turn-helix domain CLQ99_RS06265 PF16452 Bacteriophage CI repressor C-terminal domain CLQ99_RS06275 PF06892 Phage regulatory protein CII (CP76) CLQ99_RS06285 PF17282 Family of unknown function (DUF5347) CLQ99_RS06295 PF01258 Prokaryotic dksA/traR C4-type zinc finger CLQ99_RS06300 PF02086 D12 class N6 adenine-specific DNA methyltransferase CLQ99_RS06305 PF05840 Bacteriophage replication gene A protein (GPA) CLQ99_RS06315 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLQ99_RS06325 PF06183 DinI-like family CLQ99_RS06460 PF04984 Phage tail sheath protein subtilisin-like domain CLQ99_RS06460 PF17482 Phage tail sheath C-terminal domain CLQ99_RS06495 PF04606 Ogr/Delta-like zinc finger CLQ99_RS06510 PF01668 SmpB protein CLQ99_RS06515 PF03364 Polyketide cyclase / dehydrase and lipid transport CLQ99_RS06520 PF03658 RnfH family Ubiquitin CLQ99_RS06525 PF04355 SmpA / OmlA family CLQ99_RS06530 PF02463 RecF/RecN/SMC N terminal domain CLQ99_RS06535 PF01513 ATP-NAD kinase CLQ99_RS06545 PF01025 GrpE CLQ99_RS06550 PF01595 Cyclin M transmembrane N-terminal domain CLQ99_RS06550 PF03471 Transporter associated domain CLQ99_RS06550 PF00571 CBS domain CLQ99_RS06555 PF01578 Cytochrome C assembly protein CLQ99_RS06560 PF02978 Signal peptide binding domain CLQ99_RS06560 PF02881 SRP54-type protein, helical bundle domain CLQ99_RS06560 PF00448 SRP54-type protein, GTPase domain CLQ99_RS06565 PF00886 Ribosomal protein S16 CLQ99_RS06570 PF01782 RimM N-terminal domain CLQ99_RS06570 PF05239 PRC-barrel domain CLQ99_RS06575 PF01746 tRNA (Guanine-1)-methyltransferase CLQ99_RS06580 PF01245 Ribosomal protein L19 CLQ99_RS06595 PF00691 OmpA family CLQ99_RS06600 PF00990 Diguanylate cyclase, GGDEF domain CLQ99_RS06600 PF17152 Periplasmic sensor domain CLQ99_RS06605 PF13689 YfiR/HmsC-like CLQ99_RS06610 PF00793 DAHP synthetase I family CLQ99_RS06615 PF01817 Chorismate mutase type II CLQ99_RS06615 PF02153 Prephenate dehydrogenase CLQ99_RS06620 PF08450 SMP-30/Gluconolactonase/LRE-like region CLQ99_RS06625 PF01817 Chorismate mutase type II CLQ99_RS06625 PF00800 Prephenate dehydratase CLQ99_RS06635 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CLQ99_RS06640 PF13525 Outer membrane lipoprotein CLQ99_RS06645 PF00849 RNA pseudouridylate synthase CLQ99_RS06645 PF01479 S4 domain CLQ99_RS06650 PF02578 Multi-copper polyphenol oxidoreductase laccase CLQ99_RS06655 PF00004 ATPase family associated with various cellular activities (AAA) CLQ99_RS06655 PF07724 AAA domain (Cdc48 subfamily) CLQ99_RS06655 PF17871 AAA lid domain CLQ99_RS06655 PF02861 Clp amino terminal domain, pathogenicity island component CLQ99_RS06655 PF10431 C-terminal, D2-small domain, of ClpB protein CLQ99_RS06680 PF00083 Sugar (and other) transporter CLQ99_RS06685 PF10043 Predicted periplasmic lipoprotein (DUF2279) CLQ99_RS06690 PF13091 PLD-like domain CLQ99_RS06695 PF00583 Acetyltransferase (GNAT) family CLQ99_RS06695 PF13380 CoA binding domain CLQ99_RS06695 PF13607 Succinyl-CoA ligase like flavodoxin domain CLQ99_RS06700 PF03942 DTW domain CLQ99_RS06705 PF00085 Thioredoxin CLQ99_RS06710 PF08032 RNA 2'-O ribose methyltransferase substrate binding CLQ99_RS06710 PF00588 SpoU rRNA Methylase family CLQ99_RS06715 PF03167 Uracil DNA glycosylase superfamily CLQ99_RS06720 PF01228 Glycine radical CLQ99_RS06725 PF00270 DEAD/DEAH box helicase CLQ99_RS06725 PF00271 Helicase conserved C-terminal domain CLQ99_RS06730 PF05175 Methyltransferase small domain CLQ99_RS06735 PF02910 Fumarate reductase flavoprotein C-term CLQ99_RS06735 PF00890 FAD binding domain CLQ99_RS06745 PF04542 Sigma-70 region 2 CLQ99_RS06745 PF08281 Sigma-70, region 4 CLQ99_RS06750 PF03873 Anti sigma-E protein RseA, C-terminal domain CLQ99_RS06750 PF03872 Anti sigma-E protein RseA, N-terminal domain CLQ99_RS06755 PF17188 MucB/RseB C-terminal domain CLQ99_RS06755 PF03888 MucB/RseB N-terminal domain CLQ99_RS06765 PF06421 GTP-binding protein LepA C-terminus CLQ99_RS06765 PF03144 Elongation factor Tu domain 2 CLQ99_RS06765 PF00679 Elongation factor G C-terminus CLQ99_RS06765 PF00009 Elongation factor Tu GTP binding domain CLQ99_RS06770 PF10502 Signal peptidase, peptidase S26 CLQ99_RS06775 PF00035 Double-stranded RNA binding motif CLQ99_RS06775 PF14622 Ribonuclease-III-like CLQ99_RS06780 PF01926 50S ribosome-binding GTPase CLQ99_RS06780 PF07650 KH domain CLQ99_RS06785 PF11967 Recombination protein O N terminal CLQ99_RS06785 PF02565 Recombination protein O C terminal CLQ99_RS06790 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CLQ99_RS06795 PF01648 4'-phosphopantetheinyl transferase superfamily CLQ99_RS06800 PF12838 4Fe-4S dicluster domain CLQ99_RS06805 PF01418 Helix-turn-helix domain, rpiR family CLQ99_RS06805 PF01380 SIS domain CLQ99_RS06815 PF14437 MafB19-like deaminase CLQ99_RS06820 PF01464 Transglycosylase SLT domain CLQ99_RS06820 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ99_RS06825 PF02769 AIR synthase related protein, C-terminal domain CLQ99_RS06825 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CLQ99_RS06825 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal CLQ99_RS06830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS06830 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS06835 PF13942 YfhG lipoprotein CLQ99_RS06840 PF00158 Sigma-54 interaction domain CLQ99_RS06840 PF00072 Response regulator receiver domain CLQ99_RS06845 PF00543 Nitrogen regulatory protein P-II CLQ99_RS06850 PF00970 Oxidoreductase FAD-binding domain CLQ99_RS06850 PF00042 Globin CLQ99_RS06850 PF00175 Oxidoreductase NAD-binding domain CLQ99_RS06855 PF00464 Serine hydroxymethyltransferase CLQ99_RS06860 PF07681 DoxX CLQ99_RS06865 PF00480 ROK family CLQ99_RS06870 PF17128 Domain of unknown function (DUF5107) CLQ99_RS06870 PF13181 Tetratricopeptide repeat CLQ99_RS06875 PF00083 Sugar (and other) transporter CLQ99_RS06880 PF01263 Aldose 1-epimerase CLQ99_RS06885 PF12832 MFS_1 like family CLQ99_RS06890 PF00874 PRD domain CLQ99_RS06895 PF06226 Protein of unknown function (DUF1007) CLQ99_RS06900 PF03824 High-affinity nickel-transport protein CLQ99_RS06910 PF00459 Inositol monophosphatase family CLQ99_RS06915 PF00588 SpoU rRNA Methylase family CLQ99_RS06920 PF02082 Transcriptional regulator CLQ99_RS06925 PF00266 Aminotransferase class-V CLQ99_RS06930 PF01592 NifU-like N terminal domain CLQ99_RS06935 PF01521 Iron-sulphur cluster biosynthesis CLQ99_RS06940 PF00226 DnaJ domain CLQ99_RS06940 PF07743 HSCB C-terminal oligomerisation domain CLQ99_RS06945 PF00012 Hsp70 protein CLQ99_RS06950 PF00111 2Fe-2S iron-sulfur cluster binding domain CLQ99_RS06955 PF04384 Iron-sulphur cluster assembly CLQ99_RS06960 PF12404 Peptidase CLQ99_RS06960 PF00883 Cytosol aminopeptidase family, catalytic domain CLQ99_RS06965 PF07179 SseB protein N-terminal domain CLQ99_RS06965 PF14581 SseB protein C-terminal domain CLQ99_RS06975 PF00581 Rhodanese-like domain CLQ99_RS06980 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain CLQ99_RS06980 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CLQ99_RS06980 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CLQ99_RS06980 PF07678 A-macroglobulin TED domain CLQ99_RS06980 PF01835 MG2 domain CLQ99_RS06980 PF07703 Alpha-2-macroglobulin bait region domain CLQ99_RS06980 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CLQ99_RS06980 PF00207 Alpha-2-macroglobulin family CLQ99_RS06980 PF17962 Bacterial macroglobulin domain 6 CLQ99_RS06985 PF06832 Penicillin-Binding Protein C-terminus Family CLQ99_RS06985 PF00912 Transglycosylase CLQ99_RS06985 PF00905 Penicillin binding protein transpeptidase domain CLQ99_RS06990 PF00334 Nucleoside diphosphate kinase CLQ99_RS07000 PF04055 Radical SAM superfamily CLQ99_RS07005 PF13464 Domain of unknown function (DUF4115) CLQ99_RS07010 PF04551 GcpE protein CLQ99_RS07015 PF03129 Anticodon binding domain CLQ99_RS07015 PF13393 Histidyl-tRNA synthetase CLQ99_RS07020 PF09976 Tetratricopeptide repeat-like domain CLQ99_RS07025 PF13360 PQQ-like domain CLQ99_RS07030 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CLQ99_RS07030 PF01926 50S ribosome-binding GTPase CLQ99_RS07040 PF07191 zinc-ribbons CLQ99_RS07045 PF02601 Exonuclease VII, large subunit CLQ99_RS07045 PF13742 OB-fold nucleic acid binding domain CLQ99_RS07050 PF00571 CBS domain CLQ99_RS07050 PF00478 IMP dehydrogenase / GMP reductase domain CLQ99_RS07055 PF00958 GMP synthase C terminal domain CLQ99_RS07055 PF00117 Glutamine amidotransferase class-I CLQ99_RS07055 PF02540 NAD synthase CLQ99_RS07100 PF12684 PDDEXK-like domain of unknown function (DUF3799) CLQ99_RS07100 PF06630 Enterobacterial exodeoxyribonuclease VIII CLQ99_RS07180 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLQ99_RS07195 PF10668 Phage terminase small subunit CLQ99_RS07195 PF03592 Terminase small subunit CLQ99_RS07325 PF05598 Transposase domain (DUF772) CLQ99_RS07325 PF01609 Transposase DDE domain CLQ99_RS07360 PF00182 Chitinase class I CLQ99_RS07370 PF00884 Sulfatase CLQ99_RS07375 PF04055 Radical SAM superfamily CLQ99_RS07375 PF13186 Iron-sulfur cluster-binding domain CLQ99_RS07385 PF03466 LysR substrate binding domain CLQ99_RS07385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS07390 PF11119 Protein of unknown function (DUF2633) CLQ99_RS07395 PF05231 MASE1 CLQ99_RS07395 PF00563 EAL domain CLQ99_RS07400 PF02541 Ppx/GppA phosphatase family CLQ99_RS07405 PF13090 Polyphosphate kinase C-terminal domain 2 CLQ99_RS07405 PF17941 Polyphosphate kinase C-terminal domain 1 CLQ99_RS07405 PF02503 Polyphosphate kinase middle domain CLQ99_RS07405 PF13089 Polyphosphate kinase N-terminal domain CLQ99_RS07410 PF00551 Formyl transferase CLQ99_RS07415 PF02769 AIR synthase related protein, C-terminal domain CLQ99_RS07415 PF00586 AIR synthase related protein, N-terminal domain CLQ99_RS07420 PF00480 ROK family CLQ99_RS07425 PF00232 Glycosyl hydrolase family 1 CLQ99_RS07435 PF00860 Permease family CLQ99_RS07440 PF00308 Bacterial dnaA protein CLQ99_RS07445 PF04754 Putative transposase, YhgA-like CLQ99_RS07450 PF03960 ArsC family CLQ99_RS07455 PF01435 Peptidase family M48 CLQ99_RS07460 PF01594 AI-2E family transporter CLQ99_RS07465 PF00578 AhpC/TSA family CLQ99_RS07470 PF01842 ACT domain CLQ99_RS07475 PF00701 Dihydrodipicolinate synthetase family CLQ99_RS07480 PF06804 NlpB/DapX lipoprotein CLQ99_RS07485 PF01259 SAICAR synthetase CLQ99_RS07490 PF04228 Putative neutral zinc metallopeptidase CLQ99_RS07495 PF08351 Domain of unknown function (DUF1726) CLQ99_RS07495 PF13718 GNAT acetyltransferase 2 CLQ99_RS07495 PF05127 Helicase CLQ99_RS07495 PF17176 tRNA-binding domain CLQ99_RS07500 PF02230 Phospholipase/Carboxylesterase CLQ99_RS07505 PF13980 Uncharacterised protein family (UPF0370) CLQ99_RS07510 PF01546 Peptidase family M20/M25/M40 CLQ99_RS07510 PF07687 Peptidase dimerisation domain CLQ99_RS07515 PF03960 ArsC family CLQ99_RS07525 PF00873 AcrB/AcrD/AcrF family CLQ99_RS07535 PF13247 4Fe-4S dicluster domain CLQ99_RS07535 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ99_RS07535 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CLQ99_RS07540 PF00293 NUDIX domain CLQ99_RS07545 PF06674 Protein of unknown function (DUF1176) CLQ99_RS07550 PF02779 Transketolase, pyrimidine binding domain CLQ99_RS07550 PF02780 Transketolase, C-terminal domain CLQ99_RS07550 PF00456 Transketolase, thiamine diphosphate binding domain CLQ99_RS07555 PF00923 Transaldolase/Fructose-6-phosphate aldolase CLQ99_RS07560 PF03949 Malic enzyme, NAD binding domain CLQ99_RS07560 PF01515 Phosphate acetyl/butaryl transferase CLQ99_RS07560 PF00390 Malic enzyme, N-terminal domain CLQ99_RS07565 PF00936 BMC domain CLQ99_RS07570 PF10662 Ethanolamine utilisation - propanediol utilisation CLQ99_RS07575 PF06249 Ethanolamine utilisation protein EutQ CLQ99_RS07580 PF01923 Cobalamin adenosyltransferase CLQ99_RS07585 PF01515 Phosphate acetyl/butaryl transferase CLQ99_RS07590 PF00936 BMC domain CLQ99_RS07595 PF03319 Ethanolamine utilisation protein EutN/carboxysome CLQ99_RS07600 PF00171 Aldehyde dehydrogenase family CLQ99_RS07610 PF00465 Iron-containing alcohol dehydrogenase CLQ99_RS07615 PF04346 Ethanolamine utilisation protein, EutH CLQ99_RS07620 PF06277 Ethanolamine utilisation protein EutA CLQ99_RS07625 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CLQ99_RS07630 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CLQ99_RS07635 PF00936 BMC domain CLQ99_RS07640 PF00936 BMC domain CLQ99_RS07640 PF16365 Ethanolamine utilization protein EutK C-terminus CLQ99_RS07645 PF12833 Helix-turn-helix domain CLQ99_RS07650 PF01218 Coproporphyrinogen III oxidase CLQ99_RS07655 PF01520 N-acetylmuramoyl-L-alanine amidase CLQ99_RS07660 PF00583 Acetyltransferase (GNAT) family CLQ99_RS07665 PF11143 Protein of unknown function (DUF2919) CLQ99_RS07670 PF06572 Protein of unknown function (DUF1131) CLQ99_RS07675 PF04261 Dyp-type peroxidase family CLQ99_RS07690 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS07695 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS07700 PF00005 ABC transporter CLQ99_RS07705 PF00291 Pyridoxal-phosphate dependent enzyme CLQ99_RS07710 PF13474 SnoaL-like domain CLQ99_RS07715 PF00155 Aminotransferase class I and II CLQ99_RS07715 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS07720 PF08543 Phosphomethylpyrimidine kinase CLQ99_RS07730 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CLQ99_RS07735 PF05524 PEP-utilising enzyme, N-terminal CLQ99_RS07735 PF02896 PEP-utilising enzyme, TIM barrel domain CLQ99_RS07735 PF00391 PEP-utilising enzyme, mobile domain CLQ99_RS07740 PF00381 PTS HPr component phosphorylation site CLQ99_RS07745 PF00291 Pyridoxal-phosphate dependent enzyme CLQ99_RS07755 PF04354 ZipA, C-terminal FtsZ-binding domain CLQ99_RS07760 PF12826 Helix-hairpin-helix motif CLQ99_RS07760 PF01653 NAD-dependent DNA ligase adenylation domain CLQ99_RS07760 PF00533 BRCA1 C Terminus (BRCT) domain CLQ99_RS07760 PF03120 NAD-dependent DNA ligase OB-fold domain CLQ99_RS07760 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CLQ99_RS07765 PF12843 Putative quorum-sensing-regulated virulence factor CLQ99_RS07770 PF13593 SBF-like CPA transporter family (DUF4137) CLQ99_RS07775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS07775 PF03466 LysR substrate binding domain CLQ99_RS07805 PF00749 tRNA synthetases class I (E and Q), catalytic domain CLQ99_RS07810 PF07037 Putative transcription regulator (DUF1323) CLQ99_RS07815 PF07037 Putative transcription regulator (DUF1323) CLQ99_RS07830 PF00563 EAL domain CLQ99_RS07830 PF05231 MASE1 CLQ99_RS07835 PF07670 Nucleoside recognition CLQ99_RS07835 PF01773 Na+ dependent nucleoside transporter N-terminus CLQ99_RS07835 PF07662 Na+ dependent nucleoside transporter C-terminus CLQ99_RS07840 PF01566 Natural resistance-associated macrophage protein CLQ99_RS07845 PF10697 Protein of unknown function (DUF2502) CLQ99_RS07850 PF00248 Aldo/keto reductase family CLQ99_RS07855 PF00205 Thiamine pyrophosphate enzyme, central domain CLQ99_RS07855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ99_RS07855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLQ99_RS07860 PF00654 Voltage gated chloride channel CLQ99_RS07865 PF02685 Glucokinase CLQ99_RS07870 PF04397 LytTr DNA-binding domain CLQ99_RS07870 PF00072 Response regulator receiver domain CLQ99_RS07875 PF06580 Histidine kinase CLQ99_RS07875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS07875 PF07694 5TMR of 5TMR-LYT CLQ99_RS07885 PF00155 Aminotransferase class I and II CLQ99_RS07895 PF07690 Major Facilitator Superfamily CLQ99_RS07900 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLQ99_RS07905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS07905 PF03466 LysR substrate binding domain CLQ99_RS07925 PF01226 Formate/nitrite transporter CLQ99_RS07930 PF04333 MlaA lipoprotein CLQ99_RS07935 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CLQ99_RS07940 PF04175 Protein of unknown function (DUF406) CLQ99_RS07945 PF00108 Thiolase, N-terminal domain CLQ99_RS07945 PF02803 Thiolase, C-terminal domain CLQ99_RS07950 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CLQ99_RS07950 PF00378 Enoyl-CoA hydratase/isomerase CLQ99_RS07950 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CLQ99_RS07955 PF00300 Histidine phosphatase superfamily (branch 1) CLQ99_RS07960 PF01713 Smr domain CLQ99_RS07965 PF05175 Methyltransferase small domain CLQ99_RS07970 PF01264 Chorismate synthase CLQ99_RS07975 PF03411 Penicillin-insensitive murein endopeptidase CLQ99_RS07980 PF01925 Sulfite exporter TauE/SafE CLQ99_RS07985 PF04315 Elongation factor P hydroxylase CLQ99_RS07990 PF08891 YfcL protein CLQ99_RS07995 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CLQ99_RS07995 PF01266 FAD dependent oxidoreductase CLQ99_RS08000 PF00109 Beta-ketoacyl synthase, N-terminal domain CLQ99_RS08000 PF02801 Beta-ketoacyl synthase, C-terminal domain CLQ99_RS08005 PF07690 Major Facilitator Superfamily CLQ99_RS08015 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLQ99_RS08015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLQ99_RS08015 PF11890 Domain of unknown function (DUF3410) CLQ99_RS08020 PF02774 Semialdehyde dehydrogenase, dimerisation domain CLQ99_RS08020 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLQ99_RS08025 PF01416 tRNA pseudouridine synthase CLQ99_RS08030 PF09335 SNARE associated Golgi protein CLQ99_RS08035 PF17848 Acetyl-coA carboxylase zinc finger domain CLQ99_RS08035 PF01039 Carboxyl transferase domain CLQ99_RS08040 PF02875 Mur ligase family, glutamate ligase domain CLQ99_RS08040 PF08245 Mur ligase middle domain CLQ99_RS08045 PF05036 Sporulation related domain CLQ99_RS08050 PF02674 Colicin V production protein CLQ99_RS08055 PF00156 Phosphoribosyl transferase domain CLQ99_RS08060 PF02441 Flavoprotein CLQ99_RS08065 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ99_RS08070 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ99_RS08075 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS08080 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS08085 PF00005 ABC transporter CLQ99_RS08090 PF13302 Acetyltransferase (GNAT) domain CLQ99_RS08095 PF08338 Domain of unknown function (DUF1731) CLQ99_RS08095 PF01370 NAD dependent epimerase/dehydratase family CLQ99_RS08100 PF02152 Dihydroneopterin aldolase CLQ99_RS08105 PF00043 Glutathione S-transferase, C-terminal domain CLQ99_RS08105 PF02798 Glutathione S-transferase, N-terminal domain CLQ99_RS08110 PF14834 Glutathione S-transferase, C-terminal domain CLQ99_RS08110 PF02798 Glutathione S-transferase, N-terminal domain CLQ99_RS08115 PF12850 Calcineurin-like phosphoesterase superfamily domain CLQ99_RS08120 PF00293 NUDIX domain CLQ99_RS08125 PF01515 Phosphate acetyl/butaryl transferase CLQ99_RS08125 PF07085 DRTGG domain CLQ99_RS08130 PF00871 Acetokinase family CLQ99_RS08135 PF04217 Protein of unknown function, DUF412 CLQ99_RS08140 PF03887 YfbU domain CLQ99_RS08145 PF13419 Haloacid dehalogenase-like hydrolase CLQ99_RS08150 PF02080 TrkA-C domain CLQ99_RS08150 PF03600 Citrate transporter CLQ99_RS08160 PF00155 Aminotransferase class I and II CLQ99_RS08165 PF03466 LysR substrate binding domain CLQ99_RS08165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS08175 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CLQ99_RS08180 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CLQ99_RS08185 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CLQ99_RS08185 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CLQ99_RS08195 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CLQ99_RS08195 PF10531 SLBB domain CLQ99_RS08195 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLQ99_RS08200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLQ99_RS08200 PF00384 Molybdopterin oxidoreductase CLQ99_RS08200 PF01568 Molydopterin dinucleotide binding domain CLQ99_RS08200 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CLQ99_RS08205 PF00146 NADH dehydrogenase CLQ99_RS08210 PF12838 4Fe-4S dicluster domain CLQ99_RS08215 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CLQ99_RS08220 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CLQ99_RS08225 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CLQ99_RS08225 PF00361 Proton-conducting membrane transporter CLQ99_RS08230 PF00361 Proton-conducting membrane transporter CLQ99_RS08235 PF00361 Proton-conducting membrane transporter CLQ99_RS08240 PF12706 Beta-lactamase superfamily domain CLQ99_RS08245 PF13673 Acetyltransferase (GNAT) domain CLQ99_RS08250 PF00425 chorismate binding enzyme CLQ99_RS08255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ99_RS08255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLQ99_RS08255 PF16582 Middle domain of thiamine pyrophosphate CLQ99_RS08260 PF12697 Alpha/beta hydrolase family CLQ99_RS08265 PF00378 Enoyl-CoA hydratase/isomerase CLQ99_RS08270 PF13378 Enolase C-terminal domain-like CLQ99_RS08275 PF00501 AMP-binding enzyme CLQ99_RS08275 PF13193 AMP-binding enzyme C-terminal domain CLQ99_RS08280 PF00293 NUDIX domain CLQ99_RS08285 PF04754 Putative transposase, YhgA-like CLQ99_RS08290 PF07437 YfaZ precursor CLQ99_RS08295 PF00994 Probable molybdopterin binding domain CLQ99_RS08300 PF09339 IclR helix-turn-helix domain CLQ99_RS08300 PF01614 Bacterial transcriptional regulator CLQ99_RS08305 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CLQ99_RS08305 PF13378 Enolase C-terminal domain-like CLQ99_RS08310 PF07690 Major Facilitator Superfamily CLQ99_RS08315 PF03328 HpcH/HpaI aldolase/citrate lyase family CLQ99_RS08320 PF13183 4Fe-4S dicluster domain CLQ99_RS08320 PF02754 Cysteine-rich domain CLQ99_RS08325 PF00890 FAD binding domain CLQ99_RS08330 PF01266 FAD dependent oxidoreductase CLQ99_RS08330 PF04324 BFD-like [2Fe-2S] binding domain CLQ99_RS08335 PF07690 Major Facilitator Superfamily CLQ99_RS08340 PF03009 Glycerophosphoryl diester phosphodiesterase family CLQ99_RS08350 PF00111 2Fe-2S iron-sulfur cluster binding domain CLQ99_RS08355 PF00268 Ribonucleotide reductase, small chain CLQ99_RS08360 PF00317 Ribonucleotide reductase, all-alpha domain CLQ99_RS08360 PF02867 Ribonucleotide reductase, barrel domain CLQ99_RS08360 PF03477 ATP cone domain CLQ99_RS08375 PF00521 DNA gyrase/topoisomerase IV, subunit A CLQ99_RS08375 PF03989 DNA gyrase C-terminal domain, beta-propeller CLQ99_RS08380 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS08380 PF09456 RcsC Alpha-Beta-Loop (ABL) CLQ99_RS08380 PF00072 Response regulator receiver domain CLQ99_RS08380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS08385 PF00196 Bacterial regulatory proteins, luxR family CLQ99_RS08385 PF00072 Response regulator receiver domain CLQ99_RS08390 PF16359 RcsD-ABL domain CLQ99_RS08390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS08390 PF01627 Hpt domain CLQ99_RS08395 PF00267 Gram-negative porin CLQ99_RS08400 PF02424 ApbE family CLQ99_RS08405 PF12833 Helix-turn-helix domain CLQ99_RS08405 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CLQ99_RS08405 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CLQ99_RS08405 PF02805 Metal binding domain of Ada CLQ99_RS08410 PF13532 2OG-Fe(II) oxygenase superfamily CLQ99_RS08415 PF00005 ABC transporter CLQ99_RS08420 PF01769 Divalent cation transporter CLQ99_RS08420 PF00571 CBS domain CLQ99_RS08420 PF03448 MgtE intracellular N domain CLQ99_RS08425 PF01740 STAS domain CLQ99_RS08425 PF00916 Sulfate permease family CLQ99_RS08430 PF06039 Malate:quinone oxidoreductase (Mqo) CLQ99_RS08435 PF03974 Ecotin CLQ99_RS08440 PF01594 AI-2E family transporter CLQ99_RS08450 PF11893 Domain of unknown function (DUF3413) CLQ99_RS08450 PF00884 Sulfatase CLQ99_RS08455 PF07208 Protein of unknown function (DUF1414) CLQ99_RS08460 PF04245 37-kD nucleoid-associated bacterial protein CLQ99_RS08465 PF08220 DeoR-like helix-turn-helix domain CLQ99_RS08465 PF00455 DeoR C terminal sensor domain CLQ99_RS08470 PF00293 NUDIX domain CLQ99_RS08475 PF00144 Beta-lactamase CLQ99_RS08485 PF01386 Ribosomal L25p family CLQ99_RS08490 PF00271 Helicase conserved C-terminal domain CLQ99_RS08490 PF04851 Type III restriction enzyme, res subunit CLQ99_RS08495 PF00849 RNA pseudouridylate synthase CLQ99_RS08495 PF01479 S4 domain CLQ99_RS08500 PF07690 Major Facilitator Superfamily CLQ99_RS08505 PF13989 YejG-like protein CLQ99_RS08510 PF00005 ABC transporter CLQ99_RS08510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ99_RS08515 PF12911 N-terminal TM domain of oligopeptide transport permease C CLQ99_RS08515 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS08520 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS08525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ99_RS08530 PF12792 CSS motif domain associated with EAL CLQ99_RS08530 PF00563 EAL domain CLQ99_RS08535 PF00877 NlpC/P60 family CLQ99_RS08540 PF01569 PAP2 superfamily CLQ99_RS08545 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLQ99_RS08545 PF07683 Cobalamin synthesis protein cobW C-terminal domain CLQ99_RS08550 PF01232 Mannitol dehydrogenase Rossmann domain CLQ99_RS08550 PF08125 Mannitol dehydrogenase C-terminal domain CLQ99_RS08555 PF03786 D-mannonate dehydratase (UxuA) CLQ99_RS08560 PF09285 Elongation factor P, C-terminal CLQ99_RS08560 PF08207 Elongation factor P (EF-P) KOW-like domain CLQ99_RS08560 PF01132 Elongation factor P (EF-P) OB domain CLQ99_RS08565 PF03692 Putative zinc- or iron-chelating domain CLQ99_RS08575 PF07690 Major Facilitator Superfamily CLQ99_RS08585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ99_RS08585 PF00381 PTS HPr component phosphorylation site CLQ99_RS08590 PF00294 pfkB family carbohydrate kinase CLQ99_RS08595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ99_RS08595 PF02378 Phosphotransferase system, EIIC CLQ99_RS08600 PF01261 Xylose isomerase-like TIM barrel CLQ99_RS08605 PF03601 Conserved hypothetical protein 698 CLQ99_RS08615 PF03466 LysR substrate binding domain CLQ99_RS08615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS08620 PF00324 Amino acid permease CLQ99_RS08640 PF00593 TonB dependent receptor CLQ99_RS08640 PF07715 TonB-dependent Receptor Plug Domain CLQ99_RS08645 PF00756 Putative esterase CLQ99_RS08650 PF01227 GTP cyclohydrolase I CLQ99_RS08655 PF04235 Protein of unknown function (DUF418) CLQ99_RS08660 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS08665 PF13407 Periplasmic binding protein domain CLQ99_RS08670 PF00005 ABC transporter CLQ99_RS08675 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS08680 PF02698 DUF218 domain CLQ99_RS08685 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region CLQ99_RS08685 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLQ99_RS08690 PF04172 LrgB-like family CLQ99_RS08695 PF03788 LrgA family CLQ99_RS08700 PF01207 Dihydrouridine synthase (Dus) CLQ99_RS08705 PF04966 Carbohydrate-selective porin, OprB family CLQ99_RS08710 PF03123 CAT RNA binding domain CLQ99_RS08710 PF00874 PRD domain CLQ99_RS08715 PF02378 Phosphotransferase system, EIIC CLQ99_RS08715 PF00367 phosphotransferase system, EIIB CLQ99_RS08715 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CLQ99_RS08720 PF00232 Glycosyl hydrolase family 1 CLQ99_RS08725 PF02321 Outer membrane efflux protein CLQ99_RS08730 PF09335 SNARE associated Golgi protein CLQ99_RS08735 PF04893 Yip1 domain CLQ99_RS08740 PF00768 D-alanyl-D-alanine carboxypeptidase CLQ99_RS08755 PF01565 FAD binding domain CLQ99_RS08755 PF09330 D-lactate dehydrogenase, membrane binding CLQ99_RS08760 PF14310 Fibronectin type III-like domain CLQ99_RS08760 PF01915 Glycosyl hydrolase family 3 C-terminal domain CLQ99_RS08760 PF00933 Glycosyl hydrolase family 3 N terminal domain CLQ99_RS08765 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CLQ99_RS08770 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS08775 PF00005 ABC transporter CLQ99_RS08780 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS08790 PF06580 Histidine kinase CLQ99_RS08790 PF07694 5TMR of 5TMR-LYT CLQ99_RS08795 PF00072 Response regulator receiver domain CLQ99_RS08795 PF04397 LytTr DNA-binding domain CLQ99_RS08800 PF07308 Protein of unknown function (DUF1456) CLQ99_RS08805 PF09334 tRNA synthetases class I (M) CLQ99_RS08805 PF01588 Putative tRNA binding domain CLQ99_RS08810 PF10609 NUBPL iron-transfer P-loop NTPase CLQ99_RS08820 PF11776 Nickel/cobalt transporter regulator CLQ99_RS08825 PF03466 LysR substrate binding domain CLQ99_RS08825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS08830 PF00860 Permease family CLQ99_RS08835 PF01979 Amidohydrolase family CLQ99_RS08835 PF13382 Adenine deaminase C-terminal domain CLQ99_RS08840 PF03466 LysR substrate binding domain CLQ99_RS08840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS08855 PF02110 Hydroxyethylthiazole kinase family CLQ99_RS08860 PF08543 Phosphomethylpyrimidine kinase CLQ99_RS08865 PF01791 DeoC/LacD family aldolase CLQ99_RS08870 PF07690 Major Facilitator Superfamily CLQ99_RS08875 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ99_RS08875 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ99_RS08880 PF00106 short chain dehydrogenase CLQ99_RS08885 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS08890 PF04198 Putative sugar-binding domain CLQ99_RS08895 PF08125 Mannitol dehydrogenase C-terminal domain CLQ99_RS08895 PF01232 Mannitol dehydrogenase Rossmann domain CLQ99_RS08900 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ99_RS08900 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ99_RS08905 PF07690 Major Facilitator Superfamily CLQ99_RS08910 PF13419 Haloacid dehalogenase-like hydrolase CLQ99_RS08915 PF13378 Enolase C-terminal domain-like CLQ99_RS08915 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CLQ99_RS08920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ99_RS08925 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS08930 PF12911 N-terminal TM domain of oligopeptide transport permease C CLQ99_RS08930 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS08935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ99_RS08935 PF00005 ABC transporter CLQ99_RS08940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ99_RS08940 PF00005 ABC transporter CLQ99_RS08945 PF00781 Diacylglycerol kinase catalytic domain CLQ99_RS08950 PF01136 Peptidase family U32 CLQ99_RS08950 PF16325 Peptidase family U32 C-terminal domain CLQ99_RS08955 PF00072 Response regulator receiver domain CLQ99_RS08955 PF00486 Transcriptional regulatory protein, C terminal CLQ99_RS08960 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS08960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS08960 PF00672 HAMP domain CLQ99_RS08965 PF07690 Major Facilitator Superfamily CLQ99_RS08970 PF00873 AcrB/AcrD/AcrF family CLQ99_RS08975 PF00873 AcrB/AcrD/AcrF family CLQ99_RS08980 PF13533 Biotin-lipoyl like CLQ99_RS08985 PF00375 Sodium:dicarboxylate symporter family CLQ99_RS08995 PF00486 Transcriptional regulatory protein, C terminal CLQ99_RS08995 PF00072 Response regulator receiver domain CLQ99_RS09000 PF00672 HAMP domain CLQ99_RS09000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS09000 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS09000 PF13426 PAS domain CLQ99_RS09005 PF00012 Hsp70 protein CLQ99_RS09010 PF06029 AlkA N-terminal domain CLQ99_RS09010 PF00730 HhH-GPD superfamily base excision DNA repair protein CLQ99_RS09015 PF00485 Phosphoribulokinase / Uridine kinase family CLQ99_RS09020 PF00692 dUTPase CLQ99_RS09025 PF05170 AsmA family CLQ99_RS09030 PF00571 CBS domain CLQ99_RS09030 PF03741 Integral membrane protein TerC family CLQ99_RS09030 PF03471 Transporter associated domain CLQ99_RS09035 PF00483 Nucleotidyl transferase CLQ99_RS09040 PF01569 PAP2 superfamily CLQ99_RS09045 PF14052 Capsule assembly protein Wzi CLQ99_RS09050 PF02563 Polysaccharide biosynthesis/export protein CLQ99_RS09050 PF10531 SLBB domain CLQ99_RS09050 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CLQ99_RS09055 PF01451 Low molecular weight phosphotyrosine protein phosphatase CLQ99_RS09060 PF02706 Chain length determinant protein CLQ99_RS09060 PF13807 G-rich domain on putative tyrosine kinase CLQ99_RS09060 PF13614 AAA domain CLQ99_RS09085 PF00535 Glycosyl transferase family 2 CLQ99_RS09095 PF00534 Glycosyl transferases group 1 CLQ99_RS09095 PF13439 Glycosyltransferase Family 4 CLQ99_RS09105 PF00534 Glycosyl transferases group 1 CLQ99_RS09105 PF13439 Glycosyltransferase Family 4 CLQ99_RS09110 PF02397 Bacterial sugar transferase CLQ99_RS09115 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CLQ99_RS09115 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CLQ99_RS09120 PF01050 Mannose-6-phosphate isomerase CLQ99_RS09120 PF00483 Nucleotidyl transferase CLQ99_RS09125 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CLQ99_RS09125 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CLQ99_RS09125 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CLQ99_RS09125 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CLQ99_RS09130 PF16363 GDP-mannose 4,6 dehydratase CLQ99_RS09135 PF00483 Nucleotidyl transferase CLQ99_RS09140 PF04321 RmlD substrate binding domain CLQ99_RS09145 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CLQ99_RS09150 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CLQ99_RS09150 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CLQ99_RS09150 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CLQ99_RS09160 PF01609 Transposase DDE domain CLQ99_RS09160 PF05598 Transposase domain (DUF772) CLQ99_RS09175 PF01370 NAD dependent epimerase/dehydratase family CLQ99_RS09180 PF01061 ABC-2 type transporter CLQ99_RS09185 PF00005 ABC transporter CLQ99_RS09195 PF03275 UDP-galactopyranose mutase CLQ99_RS09205 PF13439 Glycosyltransferase Family 4 CLQ99_RS09205 PF00534 Glycosyl transferases group 1 CLQ99_RS09210 PF00535 Glycosyl transferase family 2 CLQ99_RS09215 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CLQ99_RS09215 PF01502 Phosphoribosyl-AMP cyclohydrolase CLQ99_RS09220 PF00977 Histidine biosynthesis protein CLQ99_RS09225 PF00977 Histidine biosynthesis protein CLQ99_RS09230 PF00117 Glutamine amidotransferase class-I CLQ99_RS09235 PF08645 Polynucleotide kinase 3 phosphatase CLQ99_RS09235 PF00475 Imidazoleglycerol-phosphate dehydratase CLQ99_RS09240 PF00155 Aminotransferase class I and II CLQ99_RS09245 PF00815 Histidinol dehydrogenase CLQ99_RS09250 PF08029 HisG, C-terminal domain CLQ99_RS09250 PF01634 ATP phosphoribosyltransferase CLQ99_RS09260 PF01370 NAD dependent epimerase/dehydratase family CLQ99_RS09265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS09265 PF03466 LysR substrate binding domain CLQ99_RS09275 PF13520 Amino acid permease CLQ99_RS09280 PF01022 Bacterial regulatory protein, arsR family CLQ99_RS09285 PF03144 Elongation factor Tu domain 2 CLQ99_RS09285 PF14492 Elongation Factor G, domain II CLQ99_RS09285 PF00009 Elongation factor Tu GTP binding domain CLQ99_RS09285 PF03764 Elongation factor G, domain IV CLQ99_RS09285 PF00679 Elongation factor G C-terminus CLQ99_RS09295 PF08411 Exonuclease C-terminal CLQ99_RS09295 PF00929 Exonuclease CLQ99_RS09300 PF07943 Penicillin-binding protein 5, C-terminal domain CLQ99_RS09300 PF00768 D-alanyl-D-alanine carboxypeptidase CLQ99_RS09310 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLQ99_RS09315 PF06445 GyrI-like small molecule binding domain CLQ99_RS09320 PF04632 Fusaric acid resistance protein family CLQ99_RS09325 PF04363 Protein of unknown function (DUF496) CLQ99_RS09330 PF02654 Cobalamin-5-phosphate synthase CLQ99_RS09335 PF02277 Phosphoribosyltransferase CLQ99_RS09340 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CLQ99_RS09340 PF05221 S-adenosyl-L-homocysteine hydrolase CLQ99_RS09350 PF14552 Tautomerase enzyme CLQ99_RS09355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS09355 PF03466 LysR substrate binding domain CLQ99_RS09365 PF07690 Major Facilitator Superfamily CLQ99_RS09365 PF00083 Sugar (and other) transporter CLQ99_RS09380 PF13188 PAS domain CLQ99_RS09380 PF03707 Bacterial signalling protein N terminal repeat CLQ99_RS09380 PF00563 EAL domain CLQ99_RS09380 PF00990 Diguanylate cyclase, GGDEF domain CLQ99_RS09385 PF09313 Domain of unknown function (DUF1971) CLQ99_RS09390 PF08956 Domain of unknown function (DUF1869) CLQ99_RS09395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS09395 PF03466 LysR substrate binding domain CLQ99_RS09405 PF00561 alpha/beta hydrolase fold CLQ99_RS09410 PF00990 Diguanylate cyclase, GGDEF domain CLQ99_RS09470 PF04002 RadC-like JAB domain CLQ99_RS09515 PF00437 Type II/IV secretion system protein CLQ99_RS09520 PF03743 Bacterial conjugation TrbI-like protein CLQ99_RS09525 PF03524 Conjugal transfer protein CLQ99_RS09545 PF04956 TrbC/VIRB2 family CLQ99_RS09595 PF07715 TonB-dependent Receptor Plug Domain CLQ99_RS09595 PF00593 TonB dependent receptor CLQ99_RS09600 PF00501 AMP-binding enzyme CLQ99_RS09600 PF13193 AMP-binding enzyme C-terminal domain CLQ99_RS09605 PF00975 Thioesterase domain CLQ99_RS09615 PF00550 Phosphopantetheine attachment site CLQ99_RS09615 PF00109 Beta-ketoacyl synthase, N-terminal domain CLQ99_RS09615 PF00698 Acyl transferase domain CLQ99_RS09615 PF16197 Ketoacyl-synthetase C-terminal extension CLQ99_RS09615 PF00668 Condensation domain CLQ99_RS09615 PF02801 Beta-ketoacyl synthase, C-terminal domain CLQ99_RS09620 PF00501 AMP-binding enzyme CLQ99_RS09620 PF00668 Condensation domain CLQ99_RS09620 PF00550 Phosphopantetheine attachment site CLQ99_RS09620 PF08242 Methyltransferase domain CLQ99_RS09630 PF00664 ABC transporter transmembrane region CLQ99_RS09630 PF00005 ABC transporter CLQ99_RS09630 PF08021 Siderophore-interacting FAD-binding domain CLQ99_RS09630 PF04954 Siderophore-interacting protein CLQ99_RS09635 PF00664 ABC transporter transmembrane region CLQ99_RS09635 PF00005 ABC transporter CLQ99_RS09640 PF07690 Major Facilitator Superfamily CLQ99_RS09645 PF00425 chorismate binding enzyme CLQ99_RS09650 PF00589 Phage integrase family CLQ99_RS09650 PF13356 Arm DNA-binding domain CLQ99_RS09660 PF01554 MatE CLQ99_RS09670 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CLQ99_RS09670 PF01048 Phosphorylase superfamily CLQ99_RS09680 PF12146 Serine aminopeptidase, S33 CLQ99_RS09690 PF00107 Zinc-binding dehydrogenase CLQ99_RS09690 PF08240 Alcohol dehydrogenase GroES-like domain CLQ99_RS09695 PF00440 Bacterial regulatory proteins, tetR family CLQ99_RS09695 PF16925 Tetracyclin repressor-like, C-terminal domain CLQ99_RS09700 PF00999 Sodium/hydrogen exchanger family CLQ99_RS09710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS09710 PF03466 LysR substrate binding domain CLQ99_RS09715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS09715 PF03466 LysR substrate binding domain CLQ99_RS09720 PF17969 L,D-transpeptidase C-terminal domain CLQ99_RS09720 PF03734 L,D-transpeptidase catalytic domain CLQ99_RS09725 PF03466 LysR substrate binding domain CLQ99_RS09725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS09735 PF06167 Glucose-regulated metallo-peptidase M90 CLQ99_RS09745 PF00267 Gram-negative porin CLQ99_RS09760 PF01966 HD domain CLQ99_RS09765 PF00145 C-5 cytosine-specific DNA methylase CLQ99_RS09765 PF18284 DNA methylase N-terminal domain CLQ99_RS09770 PF03852 DNA mismatch endonuclease Vsr CLQ99_RS09775 PF00892 EamA-like transporter family CLQ99_RS09780 PF05661 Protein of unknown function (DUF808) CLQ99_RS09785 PF17151 Periplasmic sensor domain CLQ99_RS09785 PF00990 Diguanylate cyclase, GGDEF domain CLQ99_RS09790 PF10733 Protein of unknown function (DUF2525) CLQ99_RS09795 PF10781 Dextransucrase DSRB CLQ99_RS09800 PF00196 Bacterial regulatory proteins, luxR family CLQ99_RS09805 PF13987 YedD-like protein CLQ99_RS09810 PF02806 Alpha amylase, C-terminal all-beta domain CLQ99_RS09810 PF00128 Alpha amylase, catalytic domain CLQ99_RS09815 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ99_RS09820 PF00291 Pyridoxal-phosphate dependent enzyme CLQ99_RS09825 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS09830 PF00005 ABC transporter CLQ99_RS09835 PF03472 Autoinducer binding domain CLQ99_RS09835 PF00196 Bacterial regulatory proteins, luxR family CLQ99_RS09840 PF10769 Protein of unknown function (DUF2594) CLQ99_RS09845 PF00072 Response regulator receiver domain CLQ99_RS09845 PF00196 Bacterial regulatory proteins, luxR family CLQ99_RS09850 PF08459 UvrC Helix-hairpin-helix N-terminal CLQ99_RS09850 PF02151 UvrB/uvrC motif CLQ99_RS09850 PF01541 GIY-YIG catalytic domain CLQ99_RS09855 PF01066 CDP-alcohol phosphatidyltransferase CLQ99_RS09880 PF00701 Dihydrodipicolinate synthetase family CLQ99_RS09885 PF03695 Uncharacterised protein family (UPF0149) CLQ99_RS09885 PF02810 SEC-C motif CLQ99_RS09890 PF03222 Tryptophan/tyrosine permease family CLQ99_RS09895 PF10678 Protein of unknown function (DUF2492) CLQ99_RS09900 PF00210 Ferritin-like domain CLQ99_RS09915 PF07690 Major Facilitator Superfamily CLQ99_RS09920 PF10964 Protein of unknown function (DUF2766) CLQ99_RS09935 PF00210 Ferritin-like domain CLQ99_RS09945 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CLQ99_RS09950 PF00005 ABC transporter CLQ99_RS09955 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS09960 PF02358 Trehalose-phosphatase CLQ99_RS09965 PF00982 Glycosyltransferase family 20 CLQ99_RS09970 PF00582 Universal stress protein family CLQ99_RS09980 PF07470 Glycosyl Hydrolase Family 88 CLQ99_RS09985 PF00750 tRNA synthetases class I (R) CLQ99_RS09985 PF05746 DALR anticodon binding domain CLQ99_RS09985 PF03485 Arginyl tRNA synthetase N terminal domain CLQ99_RS09990 PF06185 YecM protein CLQ99_RS09995 PF03932 CutC family CLQ99_RS10000 PF08003 Protein of unknown function (DUF1698) CLQ99_RS10005 PF13649 Methyltransferase domain CLQ99_RS10010 PF01124 MAPEG family CLQ99_RS10015 PF01904 Protein of unknown function DUF72 CLQ99_RS10020 PF00857 Isochorismatase family CLQ99_RS10025 PF02938 GAD domain CLQ99_RS10025 PF01336 OB-fold nucleic acid binding domain CLQ99_RS10025 PF00152 tRNA synthetases class II (D, K and N) CLQ99_RS10030 PF00293 NUDIX domain CLQ99_RS10035 PF01709 Transcriptional regulator CLQ99_RS10040 PF02075 Crossover junction endodeoxyribonuclease RuvC CLQ99_RS10045 PF01330 RuvA N terminal domain CLQ99_RS10045 PF07499 RuvA, C-terminal domain CLQ99_RS10050 PF05491 RuvB C-terminal winged helix domain CLQ99_RS10050 PF17864 RuvB AAA lid domain CLQ99_RS10050 PF05496 Holliday junction DNA helicase RuvB P-loop domain CLQ99_RS10055 PF00950 ABC 3 transport family CLQ99_RS10060 PF00005 ABC transporter CLQ99_RS10065 PF01297 Zinc-uptake complex component A periplasmic CLQ99_RS10070 PF08525 Opacity-associated protein A N-terminal motif CLQ99_RS10070 PF01476 LysM domain CLQ99_RS10070 PF01551 Peptidase family M23 CLQ99_RS10075 PF03279 Bacterial lipid A biosynthesis acyltransferase CLQ99_RS10080 PF00224 Pyruvate kinase, barrel domain CLQ99_RS10080 PF02887 Pyruvate kinase, alpha/beta domain CLQ99_RS10085 PF01418 Helix-turn-helix domain, rpiR family CLQ99_RS10085 PF01380 SIS domain CLQ99_RS10100 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CLQ99_RS10100 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CLQ99_RS10105 PF00920 Dehydratase family CLQ99_RS10110 PF01081 KDPG and KHG aldolase CLQ99_RS10115 PF02222 ATP-grasp domain CLQ99_RS10120 PF07130 YebG protein CLQ99_RS10125 PF04391 Protein of unknown function (DUF533) CLQ99_RS10130 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CLQ99_RS10130 PF00326 Prolyl oligopeptidase family CLQ99_RS10135 PF00929 Exonuclease CLQ99_RS10140 PF06440 DNA polymerase III, theta subunit CLQ99_RS10145 PF04234 CopC domain CLQ99_RS10150 PF05425 Copper resistance protein D CLQ99_RS10155 PF10709 Protein of unknown function (DUF2511) CLQ99_RS10165 PF04393 Protein of unknown function (DUF535) CLQ99_RS10170 PF00149 Calcineurin-like phosphoesterase CLQ99_RS10175 PF07358 Protein of unknown function (DUF1482) CLQ99_RS10180 PF07351 Protein of unknown function (DUF1480) CLQ99_RS10185 PF01189 16S rRNA methyltransferase RsmB/F CLQ99_RS10185 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CLQ99_RS10185 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CLQ99_RS10190 PF02470 MlaD protein CLQ99_RS10195 PF04403 Paraquat-inducible protein A CLQ99_RS10200 PF13185 GAF domain CLQ99_RS10205 PF17516 ProQ C-terminal domain CLQ99_RS10205 PF04352 ProQ/FINO family CLQ99_RS10210 PF00595 PDZ domain CLQ99_RS10210 PF03572 Peptidase family S41 CLQ99_RS10210 PF17804 Tail specific protease N-terminal domain CLQ99_RS10210 PF11818 C-terminal domain of tail specific protease (DUF3340) CLQ99_RS10215 PF01435 Peptidase family M48 CLQ99_RS10220 PF07690 Major Facilitator Superfamily CLQ99_RS10235 PF13996 YobH-like protein CLQ99_RS10240 PF13998 MgrB protein CLQ99_RS10245 PF13974 YebO-like protein CLQ99_RS10260 PF10736 Protein of unknown function (DUF2627) CLQ99_RS10265 PF00313 'Cold-shock' DNA-binding domain CLQ99_RS10270 PF00905 Penicillin binding protein transpeptidase domain CLQ99_RS10270 PF03717 Penicillin-binding Protein dimerisation domain CLQ99_RS10275 PF13847 Methyltransferase domain CLQ99_RS10280 PF02659 Putative manganese efflux pump CLQ99_RS10285 PF06173 Protein of unknown function (DUF986) CLQ99_RS10290 PF03613 PTS system mannose/fructose/sorbose family IID component CLQ99_RS10295 PF03609 PTS system sorbose-specific iic component CLQ99_RS10300 PF03610 PTS system fructose IIA component CLQ99_RS10300 PF03830 PTS system sorbose subfamily IIB component CLQ99_RS10305 PF03471 Transporter associated domain CLQ99_RS10305 PF03741 Integral membrane protein TerC family CLQ99_RS10310 PF00563 EAL domain CLQ99_RS10310 PF12792 CSS motif domain associated with EAL CLQ99_RS10315 PF03315 Serine dehydratase beta chain CLQ99_RS10315 PF03313 Serine dehydratase alpha chain CLQ99_RS10320 PF00293 NUDIX domain CLQ99_RS10325 PF04715 Anthranilate synthase component I, N terminal region CLQ99_RS10325 PF00425 chorismate binding enzyme CLQ99_RS10330 PF03701 Uncharacterised protein family (UPF0181) CLQ99_RS10335 PF01042 Endoribonuclease L-PSP CLQ99_RS10340 PF04851 Type III restriction enzyme, res subunit CLQ99_RS10340 PF13307 Helicase C-terminal domain CLQ99_RS10345 PF00814 Glycoprotease family CLQ99_RS10350 PF03843 Outer membrane lipoprotein Slp family CLQ99_RS10355 PF00501 AMP-binding enzyme CLQ99_RS10355 PF13193 AMP-binding enzyme C-terminal domain CLQ99_RS10360 PF01612 3'-5' exonuclease CLQ99_RS10360 PF00570 HRDC domain CLQ99_RS10365 PF03776 Septum formation topological specificity factor MinE CLQ99_RS10370 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CLQ99_RS10375 PF05209 Septum formation inhibitor MinC, N-terminal domain CLQ99_RS10375 PF03775 Septum formation inhibitor MinC, C-terminal domain CLQ99_RS10380 PF05166 YcgL domain CLQ99_RS10385 PF01557 Fumarylacetoacetate (FAA) hydrolase family CLQ99_RS10390 PF03692 Putative zinc- or iron-chelating domain CLQ99_RS10400 PF02600 Disulfide bond formation protein DsbB CLQ99_RS10405 PF06450 Bacterial Na+/H+ antiporter B (NhaB) CLQ99_RS10410 PF07840 FadR C-terminal domain CLQ99_RS10410 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS10415 PF04293 SpoVR like protein CLQ99_RS10420 PF01266 FAD dependent oxidoreductase CLQ99_RS10425 PF00842 Alanine racemase, C-terminal domain CLQ99_RS10425 PF01168 Alanine racemase, N-terminal domain CLQ99_RS10430 PF03471 Transporter associated domain CLQ99_RS10430 PF00999 Sodium/hydrogen exchanger family CLQ99_RS10430 PF02080 TrkA-C domain CLQ99_RS10435 PF02016 LD-carboxypeptidase N-terminal domain CLQ99_RS10435 PF17676 LD-carboxypeptidase C-terminal domain CLQ99_RS10440 PF01464 Transglycosylase SLT domain CLQ99_RS10445 PF00593 TonB dependent receptor CLQ99_RS10445 PF07715 TonB-dependent Receptor Plug Domain CLQ99_RS10450 PF01204 Trehalase CLQ99_RS10460 PF14403 Circularly permuted ATP-grasp type 2 CLQ99_RS10500 PF03466 LysR substrate binding domain CLQ99_RS10500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS10505 PF00291 Pyridoxal-phosphate dependent enzyme CLQ99_RS10510 PF03222 Tryptophan/tyrosine permease family CLQ99_RS10515 PF00871 Acetokinase family CLQ99_RS10520 PF01228 Glycine radical CLQ99_RS10520 PF02901 Pyruvate formate lyase-like CLQ99_RS10525 PF13458 Periplasmic binding protein CLQ99_RS10530 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS10535 PF11862 Domain of unknown function (DUF3382) CLQ99_RS10535 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS10540 PF12399 Branched-chain amino acid ATP-binding cassette transporter CLQ99_RS10540 PF00005 ABC transporter CLQ99_RS10545 PF00005 ABC transporter CLQ99_RS10550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS10550 PF03466 LysR substrate binding domain CLQ99_RS10555 PF01293 Phosphoenolpyruvate carboxykinase CLQ99_RS10565 PF03466 LysR substrate binding domain CLQ99_RS10565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS10570 PF07690 Major Facilitator Superfamily CLQ99_RS10580 PF03466 LysR substrate binding domain CLQ99_RS10580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS10590 PF00849 RNA pseudouridylate synthase CLQ99_RS10595 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) CLQ99_RS10625 PF13488 Glycine zipper CLQ99_RS10625 PF00691 OmpA family CLQ99_RS10630 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CLQ99_RS10630 PF04717 Type VI secretion system, phage-baseplate injector CLQ99_RS10630 PF13296 Putative type VI secretion system Rhs element Vgr CLQ99_RS10770 PF13407 Periplasmic binding protein domain CLQ99_RS10780 PF06071 Protein of unknown function (DUF933) CLQ99_RS10780 PF01926 50S ribosome-binding GTPase CLQ99_RS10785 PF01195 Peptidyl-tRNA hydrolase CLQ99_RS10790 PF10762 Protein of unknown function (DUF2583) CLQ99_RS10800 PF00916 Sulfate permease family CLQ99_RS10800 PF01740 STAS domain CLQ99_RS10805 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CLQ99_RS10805 PF14572 Phosphoribosyl synthetase-associated domain CLQ99_RS10810 PF08544 GHMP kinases C terminal CLQ99_RS10810 PF00288 GHMP kinases N terminal domain CLQ99_RS10815 PF03550 Outer membrane lipoprotein LolB CLQ99_RS10820 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CLQ99_RS10820 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CLQ99_RS10820 PF01488 Shikimate / quinate 5-dehydrogenase CLQ99_RS10825 PF03462 PCRF domain CLQ99_RS10825 PF00472 RF-1 domain CLQ99_RS10830 PF13847 Methyltransferase domain CLQ99_RS10830 PF17827 PrmC N-terminal domain CLQ99_RS10835 PF04247 Invasion gene expression up-regulator, SirB CLQ99_RS10840 PF13369 Transglutaminase-like superfamily CLQ99_RS10845 PF00793 DAHP synthetase I family CLQ99_RS10850 PF01699 Sodium/calcium exchanger protein CLQ99_RS10855 PF06150 ChaB CLQ99_RS10860 PF04752 ChaC-like protein CLQ99_RS10870 PF02635 DsrE/DsrF-like family CLQ99_RS10875 PF03861 ANTAR domain CLQ99_RS10875 PF08376 Nitrate and nitrite sensing CLQ99_RS10885 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS10890 PF00005 ABC transporter CLQ99_RS10895 PF18267 Rubredoxin NAD+ reductase C-terminal domain CLQ99_RS10895 PF04324 BFD-like [2Fe-2S] binding domain CLQ99_RS10895 PF13806 Rieske-like [2Fe-2S] domain CLQ99_RS10895 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ99_RS10895 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CLQ99_RS10895 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CLQ99_RS10900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLQ99_RS10900 PF00384 Molybdopterin oxidoreductase CLQ99_RS10900 PF01568 Molydopterin dinucleotide binding domain CLQ99_RS10900 PF04324 BFD-like [2Fe-2S] binding domain CLQ99_RS10905 PF11924 Inverse autotransporter, beta-domain CLQ99_RS10910 PF00196 Bacterial regulatory proteins, luxR family CLQ99_RS10910 PF00072 Response regulator receiver domain CLQ99_RS10915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS10915 PF00672 HAMP domain CLQ99_RS10915 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term CLQ99_RS10915 PF07730 Histidine kinase CLQ99_RS10920 PF07690 Major Facilitator Superfamily CLQ99_RS10925 PF00384 Molybdopterin oxidoreductase CLQ99_RS10925 PF14710 Respiratory nitrate reductase alpha N-terminal CLQ99_RS10925 PF01568 Molydopterin dinucleotide binding domain CLQ99_RS10930 PF14711 Respiratory nitrate reductase beta C-terminal CLQ99_RS10930 PF13247 4Fe-4S dicluster domain CLQ99_RS10935 PF02613 Nitrate reductase delta subunit CLQ99_RS10940 PF02665 Nitrate reductase gamma subunit CLQ99_RS10950 PF01037 Lrp/AsnC ligand binding domain CLQ99_RS10980 PF01842 ACT domain CLQ99_RS10980 PF00551 Formyl transferase CLQ99_RS10985 PF02810 SEC-C motif CLQ99_RS10990 PF01734 Patatin-like phospholipase CLQ99_RS10995 PF00072 Response regulator receiver domain CLQ99_RS11000 PF00483 Nucleotidyl transferase CLQ99_RS11005 PF00816 H-NS histone family CLQ99_RS11010 PF00265 Thymidine kinase CLQ99_RS11015 PF00465 Iron-containing alcohol dehydrogenase CLQ99_RS11015 PF00171 Aldehyde dehydrogenase family CLQ99_RS11025 PF01914 MarC family integral membrane protein CLQ99_RS11030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ99_RS11035 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS11040 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS11040 PF12911 N-terminal TM domain of oligopeptide transport permease C CLQ99_RS11045 PF00005 ABC transporter CLQ99_RS11045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ99_RS11050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ99_RS11050 PF00005 ABC transporter CLQ99_RS11055 PF00520 Ion transport protein CLQ99_RS11055 PF00027 Cyclic nucleotide-binding domain CLQ99_RS11060 PF04269 Protein of unknown function, DUF440 CLQ99_RS11065 PF13396 Phospholipase_D-nuclease N-terminal CLQ99_RS11065 PF13091 PLD-like domain CLQ99_RS11075 PF04264 YceI-like domain CLQ99_RS11080 PF03795 YCII-related domain CLQ99_RS11085 PF03544 Gram-negative bacterial TonB protein C-terminal CLQ99_RS11090 PF03881 Fructosamine kinase CLQ99_RS11095 PF11080 Endoribonuclease GhoS CLQ99_RS11100 PF00294 pfkB family carbohydrate kinase CLQ99_RS11105 PF04338 Protein of unknown function, DUF481 CLQ99_RS11115 PF02824 TGS domain CLQ99_RS11115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLQ99_RS11115 PF03129 Anticodon binding domain CLQ99_RS11115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLQ99_RS11120 PF05198 Translation initiation factor IF-3, N-terminal domain CLQ99_RS11120 PF00707 Translation initiation factor IF-3, C-terminal domain CLQ99_RS11125 PF01632 Ribosomal protein L35 CLQ99_RS11130 PF00453 Ribosomal protein L20 CLQ99_RS11145 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CLQ99_RS11145 PF01409 tRNA synthetases class II core domain (F) CLQ99_RS11150 PF03483 B3/4 domain CLQ99_RS11150 PF01588 Putative tRNA binding domain CLQ99_RS11150 PF03147 Ferredoxin-fold anticodon binding domain CLQ99_RS11150 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CLQ99_RS11150 PF03484 tRNA synthetase B5 domain CLQ99_RS11155 PF00216 Bacterial DNA-binding protein CLQ99_RS11165 PF01266 FAD dependent oxidoreductase CLQ99_RS11170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS11170 PF03466 LysR substrate binding domain CLQ99_RS11180 PF01032 FecCD transport family CLQ99_RS11185 PF03180 NLPA lipoprotein CLQ99_RS11190 PF00255 Glutathione peroxidase CLQ99_RS11195 PF00005 ABC transporter CLQ99_RS11200 PF00877 NlpC/P60 family CLQ99_RS11205 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CLQ99_RS11210 PF10636 Hemin uptake protein hemP CLQ99_RS11215 PF00793 DAHP synthetase I family CLQ99_RS11220 PF03618 Kinase/pyrophosphorylase CLQ99_RS11225 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CLQ99_RS11225 PF02896 PEP-utilising enzyme, TIM barrel domain CLQ99_RS11225 PF00391 PEP-utilising enzyme, mobile domain CLQ99_RS11235 PF01594 AI-2E family transporter CLQ99_RS11240 PF01565 FAD binding domain CLQ99_RS11240 PF02913 FAD linked oxidases, C-terminal domain CLQ99_RS11240 PF13183 4Fe-4S dicluster domain CLQ99_RS11245 PF03061 Thioesterase superfamily CLQ99_RS11250 PF04226 Transglycosylase associated protein CLQ99_RS11270 PF01717 Cobalamin-independent synthase, Catalytic domain CLQ99_RS11270 PF08267 Cobalamin-independent synthase, N-terminal domain CLQ99_RS11275 PF07690 Major Facilitator Superfamily CLQ99_RS11280 PF00005 ABC transporter CLQ99_RS11285 PF01032 FecCD transport family CLQ99_RS11295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS11295 PF03466 LysR substrate binding domain CLQ99_RS11305 PF00440 Bacterial regulatory proteins, tetR family CLQ99_RS11315 PF00873 AcrB/AcrD/AcrF family CLQ99_RS11320 PF01070 FMN-dependent dehydrogenase CLQ99_RS11325 PF00440 Bacterial regulatory proteins, tetR family CLQ99_RS11340 PF01521 Iron-sulphur cluster biosynthesis CLQ99_RS11345 PF01458 Uncharacterized protein family (UPF0051) CLQ99_RS11350 PF00005 ABC transporter CLQ99_RS11355 PF01458 Uncharacterized protein family (UPF0051) CLQ99_RS11360 PF00266 Aminotransferase class-V CLQ99_RS11365 PF02657 Fe-S metabolism associated domain CLQ99_RS11370 PF01476 LysM domain CLQ99_RS11370 PF03734 L,D-transpeptidase catalytic domain CLQ99_RS11370 PF17969 L,D-transpeptidase C-terminal domain CLQ99_RS11375 PF04728 Lipoprotein leucine-zipper CLQ99_RS11380 PF02887 Pyruvate kinase, alpha/beta domain CLQ99_RS11380 PF00224 Pyruvate kinase, barrel domain CLQ99_RS11390 PF10965 Protein of unknown function (DUF2767) CLQ99_RS11395 PF17926 Tetracyclin repressor-like, C-terminal domain CLQ99_RS11395 PF00440 Bacterial regulatory proteins, tetR family CLQ99_RS11400 PF01261 Xylose isomerase-like TIM barrel CLQ99_RS11400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CLQ99_RS11405 PF07690 Major Facilitator Superfamily CLQ99_RS11410 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CLQ99_RS11410 PF08501 Shikimate dehydrogenase substrate binding domain CLQ99_RS11410 PF01488 Shikimate / quinate 5-dehydrogenase CLQ99_RS11420 PF00005 ABC transporter CLQ99_RS11425 PF01032 FecCD transport family CLQ99_RS11430 PF01497 Periplasmic binding protein CLQ99_RS11435 PF01614 Bacterial transcriptional regulator CLQ99_RS11435 PF09339 IclR helix-turn-helix domain CLQ99_RS11440 PF01494 FAD binding domain CLQ99_RS11445 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CLQ99_RS11450 PF12697 Alpha/beta hydrolase family CLQ99_RS11455 PF01557 Fumarylacetoacetate (FAA) hydrolase family CLQ99_RS11460 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLQ99_RS11460 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CLQ99_RS11465 PF07836 DmpG-like communication domain CLQ99_RS11465 PF00682 HMGL-like CLQ99_RS11470 PF07690 Major Facilitator Superfamily CLQ99_RS11475 PF02578 Multi-copper polyphenol oxidoreductase laccase CLQ99_RS11485 PF05995 Cysteine dioxygenase type I CLQ99_RS11490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS11490 PF03466 LysR substrate binding domain CLQ99_RS11495 PF00296 Luciferase-like monooxygenase CLQ99_RS11515 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS11520 PF00005 ABC transporter CLQ99_RS11525 PF07715 TonB-dependent Receptor Plug Domain CLQ99_RS11530 PF00005 ABC transporter CLQ99_RS11535 PF01032 FecCD transport family CLQ99_RS11540 PF01032 FecCD transport family CLQ99_RS11555 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ99_RS11560 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS11565 PF00005 ABC transporter CLQ99_RS11580 PF07690 Major Facilitator Superfamily CLQ99_RS11595 PF01546 Peptidase family M20/M25/M40 CLQ99_RS11595 PF07687 Peptidase dimerisation domain CLQ99_RS11600 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLQ99_RS11600 PF01568 Molydopterin dinucleotide binding domain CLQ99_RS11600 PF00384 Molybdopterin oxidoreductase CLQ99_RS11605 PF02615 Malate/L-lactate dehydrogenase CLQ99_RS11620 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS11625 PF08402 TOBE domain CLQ99_RS11625 PF00005 ABC transporter CLQ99_RS11635 PF13618 Gluconate 2-dehydrogenase subunit 3 CLQ99_RS11640 PF05199 GMC oxidoreductase CLQ99_RS11640 PF00732 GMC oxidoreductase CLQ99_RS11645 PF00034 Cytochrome c CLQ99_RS11645 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CLQ99_RS11650 PF00005 ABC transporter CLQ99_RS11655 PF03379 CcmB protein CLQ99_RS11660 PF01578 Cytochrome C assembly protein CLQ99_RS11670 PF03100 CcmE CLQ99_RS11675 PF01578 Cytochrome C assembly protein CLQ99_RS11675 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CLQ99_RS11680 PF08534 Redoxin CLQ99_RS11685 PF03918 Cytochrome C biogenesis protein CLQ99_RS11725 PF03544 Gram-negative bacterial TonB protein C-terminal CLQ99_RS11755 PF05598 Transposase domain (DUF772) CLQ99_RS11755 PF01609 Transposase DDE domain CLQ99_RS11770 PF00873 AcrB/AcrD/AcrF family CLQ99_RS11785 PF00106 short chain dehydrogenase CLQ99_RS11790 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLQ99_RS11790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ99_RS11790 PF00205 Thiamine pyrophosphate enzyme, central domain CLQ99_RS11795 PF03306 Alpha-acetolactate decarboxylase CLQ99_RS11800 PF03466 LysR substrate binding domain CLQ99_RS11800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS11805 PF00106 short chain dehydrogenase CLQ99_RS11815 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CLQ99_RS11815 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CLQ99_RS11825 PF01144 Coenzyme A transferase CLQ99_RS11830 PF01144 Coenzyme A transferase CLQ99_RS11835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS11835 PF03466 LysR substrate binding domain CLQ99_RS11860 PF02913 FAD linked oxidases, C-terminal domain CLQ99_RS11860 PF01565 FAD binding domain CLQ99_RS11865 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS11870 PF00005 ABC transporter CLQ99_RS11880 PF02633 Creatinine amidohydrolase CLQ99_RS11885 PF01042 Endoribonuclease L-PSP CLQ99_RS11890 PF07969 Amidohydrolase family CLQ99_RS11895 PF00111 2Fe-2S iron-sulfur cluster binding domain CLQ99_RS11905 PF03466 LysR substrate binding domain CLQ99_RS11905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS11935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS11935 PF03466 LysR substrate binding domain CLQ99_RS11940 PF16197 Ketoacyl-synthetase C-terminal extension CLQ99_RS11940 PF00698 Acyl transferase domain CLQ99_RS11940 PF08240 Alcohol dehydrogenase GroES-like domain CLQ99_RS11940 PF00109 Beta-ketoacyl synthase, N-terminal domain CLQ99_RS11940 PF08659 KR domain CLQ99_RS11940 PF02801 Beta-ketoacyl synthase, C-terminal domain CLQ99_RS11940 PF00550 Phosphopantetheine attachment site CLQ99_RS11940 PF14765 Polyketide synthase dehydratase CLQ99_RS11945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS11945 PF03466 LysR substrate binding domain CLQ99_RS11950 PF07690 Major Facilitator Superfamily CLQ99_RS11970 PF00005 ABC transporter CLQ99_RS11970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ99_RS11975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ99_RS11975 PF00005 ABC transporter CLQ99_RS11980 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS11985 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS11990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ99_RS12000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CLQ99_RS12005 PF08220 DeoR-like helix-turn-helix domain CLQ99_RS12005 PF00455 DeoR C terminal sensor domain CLQ99_RS12015 PF00484 Carbonic anhydrase CLQ99_RS12035 PF00753 Metallo-beta-lactamase superfamily CLQ99_RS12035 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CLQ99_RS12035 PF10996 Beta-Casp domain CLQ99_RS12045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS12045 PF03466 LysR substrate binding domain CLQ99_RS12075 PF03641 Possible lysine decarboxylase CLQ99_RS12085 PF01554 MatE CLQ99_RS12090 PF00677 Lumazine binding domain CLQ99_RS12100 PF07690 Major Facilitator Superfamily CLQ99_RS12105 PF03466 LysR substrate binding domain CLQ99_RS12105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS12110 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS12120 PF07690 Major Facilitator Superfamily CLQ99_RS12125 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CLQ99_RS12125 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CLQ99_RS12135 PF00877 NlpC/P60 family CLQ99_RS12140 PF00462 Glutaredoxin CLQ99_RS12145 PF00929 Exonuclease CLQ99_RS12150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CLQ99_RS12155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLQ99_RS12160 PF16925 Tetracyclin repressor-like, C-terminal domain CLQ99_RS12160 PF00440 Bacterial regulatory proteins, tetR family CLQ99_RS12165 PF06945 Protein of unknown function (DUF1289) CLQ99_RS12170 PF00248 Aldo/keto reductase family CLQ99_RS12175 PF00080 Copper/zinc superoxide dismutase (SODC) CLQ99_RS12180 PF04632 Fusaric acid resistance protein family CLQ99_RS12185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ99_RS12185 PF00529 HlyD membrane-fusion protein of T1SS CLQ99_RS12190 PF07869 Protein of unknown function (DUF1656) CLQ99_RS12195 PF01047 MarR family CLQ99_RS12200 PF00990 Diguanylate cyclase, GGDEF domain CLQ99_RS12200 PF17158 Membrane-associated sensor, integral membrane domain CLQ99_RS12205 PF05433 Glycine zipper 2TM domain CLQ99_RS12210 PF03702 Anhydro-N-acetylmuramic acid kinase CLQ99_RS12215 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme CLQ99_RS12220 PF01243 Pyridoxamine 5'-phosphate oxidase CLQ99_RS12220 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CLQ99_RS12225 PF00579 tRNA synthetases class I (W and Y) CLQ99_RS12230 PF08543 Phosphomethylpyrimidine kinase CLQ99_RS12235 PF02798 Glutathione S-transferase, N-terminal domain CLQ99_RS12235 PF00043 Glutathione S-transferase, C-terminal domain CLQ99_RS12240 PF00854 POT family CLQ99_RS12250 PF00730 HhH-GPD superfamily base excision DNA repair protein CLQ99_RS12250 PF00633 Helix-hairpin-helix motif CLQ99_RS12250 PF10576 Iron-sulfur binding domain of endonuclease III CLQ99_RS12255 PF02508 Rnf-Nqr subunit, membrane protein CLQ99_RS12260 PF04205 FMN-binding domain CLQ99_RS12265 PF03116 NQR2, RnfD, RnfE family CLQ99_RS12270 PF10531 SLBB domain CLQ99_RS12270 PF13375 RnfC Barrel sandwich hybrid domain CLQ99_RS12270 PF12838 4Fe-4S dicluster domain CLQ99_RS12270 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CLQ99_RS12275 PF04060 Putative Fe-S cluster CLQ99_RS12280 PF02508 Rnf-Nqr subunit, membrane protein CLQ99_RS12285 PF10754 Protein of unknown function (DUF2569) CLQ99_RS12290 PF05321 Haemolysin expression modulating protein CLQ99_RS12295 PF00232 Glycosyl hydrolase family 1 CLQ99_RS12305 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLQ99_RS12305 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ99_RS12310 PF00962 Adenosine/AMP deaminase CLQ99_RS12315 PF07690 Major Facilitator Superfamily CLQ99_RS12320 PF01638 HxlR-like helix-turn-helix CLQ99_RS12335 PF01292 Prokaryotic cytochrome b561 CLQ99_RS12340 PF02583 Metal-sensitive transcriptional repressor CLQ99_RS12345 PF00107 Zinc-binding dehydrogenase CLQ99_RS12345 PF08240 Alcohol dehydrogenase GroES-like domain CLQ99_RS12350 PF01011 PQQ enzyme repeat CLQ99_RS12355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS12355 PF03466 LysR substrate binding domain CLQ99_RS12360 PF00775 Dioxygenase CLQ99_RS12365 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CLQ99_RS12365 PF00775 Dioxygenase CLQ99_RS12370 PF07063 Domain of unknown function (DUF1338) CLQ99_RS12375 PF00135 Carboxylesterase family CLQ99_RS12380 PF00107 Zinc-binding dehydrogenase CLQ99_RS12380 PF08240 Alcohol dehydrogenase GroES-like domain CLQ99_RS12385 PF04349 Periplasmic glucan biosynthesis protein, MdoG CLQ99_RS12390 PF13302 Acetyltransferase (GNAT) domain CLQ99_RS12395 PF18836 Beta solenoid repeat from YDCK CLQ99_RS12400 PF03595 Voltage-dependent anion channel CLQ99_RS12405 PF03848 Tellurite resistance protein TehB CLQ99_RS12410 PF11769 Protein of unknown function (DUF3313) CLQ99_RS12415 PF00892 EamA-like transporter family CLQ99_RS12420 PF06445 GyrI-like small molecule binding domain CLQ99_RS12420 PF12833 Helix-turn-helix domain CLQ99_RS12425 PF03594 Benzoate membrane transport protein CLQ99_RS12430 PF07883 Cupin domain CLQ99_RS12430 PF01381 Helix-turn-helix CLQ99_RS12440 PF12392 Collagenase CLQ99_RS12440 PF01136 Peptidase family U32 CLQ99_RS12460 PF02322 Cytochrome bd terminal oxidase subunit II CLQ99_RS12465 PF01654 Cytochrome bd terminal oxidase subunit I CLQ99_RS12470 PF00155 Aminotransferase class I and II CLQ99_RS12470 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS12475 PF13416 Bacterial extracellular solute-binding protein CLQ99_RS12480 PF08402 TOBE domain CLQ99_RS12480 PF00005 ABC transporter CLQ99_RS12485 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS12490 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS12495 PF00171 Aldehyde dehydrogenase family CLQ99_RS12515 PF10753 Toxin GhoT_OrtT CLQ99_RS12520 PF00561 alpha/beta hydrolase fold CLQ99_RS12520 PF00364 Biotin-requiring enzyme CLQ99_RS12525 PF00171 Aldehyde dehydrogenase family CLQ99_RS12530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ99_RS12535 PF10735 Protein of unknown function (DUF2526) CLQ99_RS12540 PF04657 Putative inner membrane exporter, YdcZ CLQ99_RS12545 PF00583 Acetyltransferase (GNAT) family CLQ99_RS12550 PF08671 Anti-repressor SinI CLQ99_RS12550 PF01381 Helix-turn-helix CLQ99_RS12555 PF16884 N-terminal domain of oxidoreductase CLQ99_RS12555 PF00107 Zinc-binding dehydrogenase CLQ99_RS12560 PF01156 Inosine-uridine preferring nucleoside hydrolase CLQ99_RS12570 PF04175 Protein of unknown function (DUF406) CLQ99_RS12575 PF01979 Amidohydrolase family CLQ99_RS12580 PF07715 TonB-dependent Receptor Plug Domain CLQ99_RS12580 PF00593 TonB dependent receptor CLQ99_RS12595 PF00324 Amino acid permease CLQ99_RS12605 PF01202 Shikimate kinase CLQ99_RS12610 PF00296 Luciferase-like monooxygenase CLQ99_RS12615 PF01546 Peptidase family M20/M25/M40 CLQ99_RS12615 PF07687 Peptidase dimerisation domain CLQ99_RS12620 PF00296 Luciferase-like monooxygenase CLQ99_RS12625 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ99_RS12635 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS12640 PF00005 ABC transporter CLQ99_RS12650 PF13417 Glutathione S-transferase, N-terminal domain CLQ99_RS12655 PF01361 Tautomerase enzyme CLQ99_RS12675 PF11471 Maltoporin periplasmic N-terminal extension CLQ99_RS12675 PF02264 LamB porin CLQ99_RS12690 PF12833 Helix-turn-helix domain CLQ99_RS12690 PF02311 AraC-like ligand binding domain CLQ99_RS12695 PF01613 Flavin reductase like domain CLQ99_RS12700 PF00005 ABC transporter CLQ99_RS12700 PF17912 MalK OB fold domain CLQ99_RS12710 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS12715 PF00797 N-acetyltransferase CLQ99_RS12720 PF02665 Nitrate reductase gamma subunit CLQ99_RS12725 PF02613 Nitrate reductase delta subunit CLQ99_RS12730 PF14711 Respiratory nitrate reductase beta C-terminal CLQ99_RS12730 PF13247 4Fe-4S dicluster domain CLQ99_RS12735 PF14710 Respiratory nitrate reductase alpha N-terminal CLQ99_RS12735 PF01568 Molydopterin dinucleotide binding domain CLQ99_RS12735 PF00384 Molybdopterin oxidoreductase CLQ99_RS12740 PF07690 Major Facilitator Superfamily CLQ99_RS12750 PF07690 Major Facilitator Superfamily CLQ99_RS12755 PF01614 Bacterial transcriptional regulator CLQ99_RS12755 PF09339 IclR helix-turn-helix domain CLQ99_RS12760 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CLQ99_RS12760 PF13378 Enolase C-terminal domain-like CLQ99_RS12765 PF02426 Muconolactone delta-isomerase CLQ99_RS12770 PF00775 Dioxygenase CLQ99_RS12770 PF04444 Catechol dioxygenase N terminus CLQ99_RS12775 PF01609 Transposase DDE domain CLQ99_RS12775 PF05598 Transposase domain (DUF772) CLQ99_RS12785 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CLQ99_RS12785 PF00355 Rieske [2Fe-2S] domain CLQ99_RS12790 PF00866 Ring hydroxylating beta subunit CLQ99_RS12795 PF00111 2Fe-2S iron-sulfur cluster binding domain CLQ99_RS12795 PF00970 Oxidoreductase FAD-binding domain CLQ99_RS12795 PF00175 Oxidoreductase NAD-binding domain CLQ99_RS12800 PF00106 short chain dehydrogenase CLQ99_RS12805 PF00892 EamA-like transporter family CLQ99_RS12810 PF00384 Molybdopterin oxidoreductase CLQ99_RS12810 PF01568 Molydopterin dinucleotide binding domain CLQ99_RS12810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLQ99_RS12815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLQ99_RS12815 PF00384 Molybdopterin oxidoreductase CLQ99_RS12815 PF01568 Molydopterin dinucleotide binding domain CLQ99_RS12820 PF12800 4Fe-4S binding domain CLQ99_RS12820 PF09163 Formate dehydrogenase N, transmembrane CLQ99_RS12820 PF13247 4Fe-4S dicluster domain CLQ99_RS12825 PF01292 Prokaryotic cytochrome b561 CLQ99_RS12840 PF03976 Polyphosphate kinase 2 (PPK2) CLQ99_RS12850 PF07690 Major Facilitator Superfamily CLQ99_RS12860 PF00296 Luciferase-like monooxygenase CLQ99_RS12865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ99_RS12865 PF00005 ABC transporter CLQ99_RS12870 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS12870 PF12911 N-terminal TM domain of oligopeptide transport permease C CLQ99_RS12875 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS12880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ99_RS12885 PF08240 Alcohol dehydrogenase GroES-like domain CLQ99_RS12885 PF00107 Zinc-binding dehydrogenase CLQ99_RS12890 PF00719 Inorganic pyrophosphatase CLQ99_RS12900 PF00005 ABC transporter CLQ99_RS12900 PF12848 ABC transporter CLQ99_RS12915 PF00390 Malic enzyme, N-terminal domain CLQ99_RS12915 PF03949 Malic enzyme, NAD binding domain CLQ99_RS12920 PF08136 30S ribosomal protein subunit S22 family CLQ99_RS12930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS12930 PF03466 LysR substrate binding domain CLQ99_RS12935 PF10820 Protein of unknown function (DUF2543) CLQ99_RS12945 PF10685 Stress-induced bacterial acidophilic repeat motif CLQ99_RS12960 PF05974 Domain of unknown function (DUF892) CLQ99_RS12970 PF16657 Maltogenic Amylase, C-terminal domain CLQ99_RS12970 PF00128 Alpha amylase, catalytic domain CLQ99_RS12975 PF00106 short chain dehydrogenase CLQ99_RS12980 PF04239 Protein of unknown function (DUF421) CLQ99_RS12990 PF04076 Bacterial OB fold (BOF) protein CLQ99_RS12995 PF02566 OsmC-like protein CLQ99_RS13015 PF01545 Cation efflux family CLQ99_RS13015 PF16916 Dimerisation domain of Zinc Transporter CLQ99_RS13020 PF01062 Bestrophin, RFP-TM, chloride channel CLQ99_RS13025 PF00384 Molybdopterin oxidoreductase CLQ99_RS13035 PF13737 Transposase DDE domain CLQ99_RS13050 PF02378 Phosphotransferase system, EIIC CLQ99_RS13075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ99_RS13080 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CLQ99_RS13085 PF00083 Sugar (and other) transporter CLQ99_RS13095 PF02308 MgtC family CLQ99_RS13100 PF03969 AFG1-like ATPase CLQ99_RS13105 PF00141 Peroxidase CLQ99_RS13110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS13110 PF03466 LysR substrate binding domain CLQ99_RS13125 PF00905 Penicillin binding protein transpeptidase domain CLQ99_RS13125 PF03717 Penicillin-binding Protein dimerisation domain CLQ99_RS13130 PF02540 NAD synthase CLQ99_RS13130 PF00958 GMP synthase C terminal domain CLQ99_RS13130 PF00117 Glutamine amidotransferase class-I CLQ99_RS13135 PF00675 Insulinase (Peptidase family M16) CLQ99_RS13140 PF13186 Iron-sulfur cluster-binding domain CLQ99_RS13140 PF04055 Radical SAM superfamily CLQ99_RS13145 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CLQ99_RS13150 PF03070 TENA/THI-4/PQQC family CLQ99_RS13155 PF12706 Beta-lactamase superfamily domain CLQ99_RS13160 PF08042 PqqA family CLQ99_RS13165 PF01244 Membrane dipeptidase (Peptidase family M19) CLQ99_RS13170 PF00561 alpha/beta hydrolase fold CLQ99_RS13175 PF00486 Transcriptional regulatory protein, C terminal CLQ99_RS13175 PF00072 Response regulator receiver domain CLQ99_RS13180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS13180 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS13180 PF00672 HAMP domain CLQ99_RS13185 PF02683 Cytochrome C biogenesis protein transmembrane region CLQ99_RS13185 PF17991 Thioredoxin like C-terminal domain CLQ99_RS13185 PF00578 AhpC/TSA family CLQ99_RS13195 PF00282 Pyridoxal-dependent decarboxylase conserved domain CLQ99_RS13200 PF00202 Aminotransferase class-III CLQ99_RS13205 PF09084 NMT1/THI5 like CLQ99_RS13210 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS13215 PF00005 ABC transporter CLQ99_RS13220 PF03070 TENA/THI-4/PQQC family CLQ99_RS13230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ99_RS13230 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLQ99_RS13240 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS13245 PF00990 Diguanylate cyclase, GGDEF domain CLQ99_RS13245 PF08448 PAS fold CLQ99_RS13250 PF01979 Amidohydrolase family CLQ99_RS13255 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CLQ99_RS13265 PF01177 Asp/Glu/Hydantoin racemase CLQ99_RS13290 PF00300 Histidine phosphatase superfamily (branch 1) CLQ99_RS13300 PF00857 Isochorismatase family CLQ99_RS13310 PF00106 short chain dehydrogenase CLQ99_RS13315 PF00117 Glutamine amidotransferase class-I CLQ99_RS13340 PF02801 Beta-ketoacyl synthase, C-terminal domain CLQ99_RS13340 PF00109 Beta-ketoacyl synthase, N-terminal domain CLQ99_RS13345 PF07690 Major Facilitator Superfamily CLQ99_RS13350 PF13533 Biotin-lipoyl like CLQ99_RS13360 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLQ99_RS13360 PF02774 Semialdehyde dehydrogenase, dimerisation domain CLQ99_RS13375 PF01425 Amidase CLQ99_RS13400 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS13405 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS13410 PF00005 ABC transporter CLQ99_RS13415 PF00266 Aminotransferase class-V CLQ99_RS13420 PF01546 Peptidase family M20/M25/M40 CLQ99_RS13420 PF07687 Peptidase dimerisation domain CLQ99_RS13425 PF03060 Nitronate monooxygenase CLQ99_RS13430 PF03466 LysR substrate binding domain CLQ99_RS13430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS13440 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLQ99_RS13445 PF13454 FAD-NAD(P)-binding CLQ99_RS13450 PF07690 Major Facilitator Superfamily CLQ99_RS13450 PF00083 Sugar (and other) transporter CLQ99_RS13465 PF00440 Bacterial regulatory proteins, tetR family CLQ99_RS13480 PF07690 Major Facilitator Superfamily CLQ99_RS13490 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS13495 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ99_RS13505 PF01609 Transposase DDE domain CLQ99_RS13505 PF05598 Transposase domain (DUF772) CLQ99_RS13515 PF03611 PTS system sugar-specific permease component CLQ99_RS13520 PF00834 Ribulose-phosphate 3 epimerase family CLQ99_RS13530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ99_RS13535 PF02378 Phosphotransferase system, EIIC CLQ99_RS13535 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ99_RS13540 PF01810 LysE type translocator CLQ99_RS13550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS13550 PF03466 LysR substrate binding domain CLQ99_RS13555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS13555 PF03466 LysR substrate binding domain CLQ99_RS13560 PF00753 Metallo-beta-lactamase superfamily CLQ99_RS13570 PF01546 Peptidase family M20/M25/M40 CLQ99_RS13570 PF07687 Peptidase dimerisation domain CLQ99_RS13580 PF02126 Phosphotriesterase family CLQ99_RS13585 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS13590 PF00005 ABC transporter CLQ99_RS13595 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS13605 PF00294 pfkB family carbohydrate kinase CLQ99_RS13625 PF01476 LysM domain CLQ99_RS13625 PF04972 BON domain CLQ99_RS13640 PF01613 Flavin reductase like domain CLQ99_RS13640 PF00258 Flavodoxin CLQ99_RS13645 PF07690 Major Facilitator Superfamily CLQ99_RS13655 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS13655 PF00672 HAMP domain CLQ99_RS13655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS13660 PF02954 Bacterial regulatory protein, Fis family CLQ99_RS13660 PF00072 Response regulator receiver domain CLQ99_RS13660 PF14532 Sigma-54 interaction domain CLQ99_RS13665 PF04229 GrpB protein CLQ99_RS13665 PF13673 Acetyltransferase (GNAT) domain CLQ99_RS13670 PF03466 LysR substrate binding domain CLQ99_RS13670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS13675 PF00248 Aldo/keto reductase family CLQ99_RS13680 PF00248 Aldo/keto reductase family CLQ99_RS13690 PF00248 Aldo/keto reductase family CLQ99_RS13700 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CLQ99_RS13700 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLQ99_RS13705 PF12833 Helix-turn-helix domain CLQ99_RS13705 PF01965 DJ-1/PfpI family CLQ99_RS13715 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CLQ99_RS13730 PF00455 DeoR C terminal sensor domain CLQ99_RS13730 PF08220 DeoR-like helix-turn-helix domain CLQ99_RS13735 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ99_RS13735 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ99_RS13740 PF01791 DeoC/LacD family aldolase CLQ99_RS13745 PF08220 DeoR-like helix-turn-helix domain CLQ99_RS13745 PF00455 DeoR C terminal sensor domain CLQ99_RS13750 PF00834 Ribulose-phosphate 3 epimerase family CLQ99_RS13755 PF00294 pfkB family carbohydrate kinase CLQ99_RS13760 PF07690 Major Facilitator Superfamily CLQ99_RS13770 PF00501 AMP-binding enzyme CLQ99_RS13770 PF13193 AMP-binding enzyme C-terminal domain CLQ99_RS13775 PF01144 Coenzyme A transferase CLQ99_RS13785 PF02803 Thiolase, C-terminal domain CLQ99_RS13785 PF00108 Thiolase, N-terminal domain CLQ99_RS13790 PF07690 Major Facilitator Superfamily CLQ99_RS13795 PF08450 SMP-30/Gluconolactonase/LRE-like region CLQ99_RS13805 PF02595 Glycerate kinase family CLQ99_RS13810 PF05651 Putative sugar diacid recognition CLQ99_RS13810 PF17853 GGDEF-like domain CLQ99_RS13810 PF13556 PucR C-terminal helix-turn-helix domain CLQ99_RS13815 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CLQ99_RS13815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CLQ99_RS13820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS13820 PF03466 LysR substrate binding domain CLQ99_RS13830 PF07729 FCD domain CLQ99_RS13830 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS13835 PF00367 phosphotransferase system, EIIB CLQ99_RS13835 PF02378 Phosphotransferase system, EIIC CLQ99_RS13840 PF02056 Family 4 glycosyl hydrolase CLQ99_RS13840 PF11975 Family 4 glycosyl hydrolase C-terminal domain CLQ99_RS13845 PF00083 Sugar (and other) transporter CLQ99_RS13850 PF00381 PTS HPr component phosphorylation site CLQ99_RS13850 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ99_RS13860 PF00756 Putative esterase CLQ99_RS13865 PF00563 EAL domain CLQ99_RS13865 PF13188 PAS domain CLQ99_RS13865 PF00990 Diguanylate cyclase, GGDEF domain CLQ99_RS13865 PF03707 Bacterial signalling protein N terminal repeat CLQ99_RS13880 PF00557 Metallopeptidase family M24 CLQ99_RS13895 PF02753 Pili assembly chaperone PapD, C-terminal domain CLQ99_RS13895 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CLQ99_RS13900 PF00577 Outer membrane usher protein CLQ99_RS13900 PF13954 PapC N-terminal domain CLQ99_RS13900 PF13953 PapC C-terminal domain CLQ99_RS13910 PF02638 Glycosyl hydrolase-like 10 CLQ99_RS13915 PF07804 HipA-like C-terminal domain CLQ99_RS13915 PF13657 HipA N-terminal domain CLQ99_RS13920 PF01381 Helix-turn-helix CLQ99_RS13925 PF00576 HIUase/Transthyretin family CLQ99_RS13930 PF01014 Uricase CLQ99_RS13930 PF09349 OHCU decarboxylase CLQ99_RS13935 PF00860 Permease family CLQ99_RS13940 PF01494 FAD binding domain CLQ99_RS13945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS13945 PF03466 LysR substrate binding domain CLQ99_RS13950 PF00355 Rieske [2Fe-2S] domain CLQ99_RS13955 PF00111 2Fe-2S iron-sulfur cluster binding domain CLQ99_RS13960 PF07690 Major Facilitator Superfamily CLQ99_RS13965 PF12833 Helix-turn-helix domain CLQ99_RS13980 PF09905 DNA-binding protein VF530 CLQ99_RS13990 PF03180 NLPA lipoprotein CLQ99_RS13995 PF00005 ABC transporter CLQ99_RS13995 PF09383 NIL domain CLQ99_RS14000 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS14005 PF03060 Nitronate monooxygenase CLQ99_RS14010 PF03466 LysR substrate binding domain CLQ99_RS14010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS14015 PF06779 Uncharacterised MFS-type transporter YbfB CLQ99_RS14030 PF07690 Major Facilitator Superfamily CLQ99_RS14040 PF13649 Methyltransferase domain CLQ99_RS14080 PF00583 Acetyltransferase (GNAT) family CLQ99_RS14085 PF01232 Mannitol dehydrogenase Rossmann domain CLQ99_RS14085 PF08125 Mannitol dehydrogenase C-terminal domain CLQ99_RS14095 PF00990 Diguanylate cyclase, GGDEF domain CLQ99_RS14100 PF13811 Domain of unknown function (DUF4186) CLQ99_RS14105 PF04960 Glutaminase CLQ99_RS14110 PF00171 Aldehyde dehydrogenase family CLQ99_RS14115 PF03466 LysR substrate binding domain CLQ99_RS14115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS14120 PF00583 Acetyltransferase (GNAT) family CLQ99_RS14125 PF00056 lactate/malate dehydrogenase, NAD binding domain CLQ99_RS14125 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CLQ99_RS14130 PF08220 DeoR-like helix-turn-helix domain CLQ99_RS14130 PF00455 DeoR C terminal sensor domain CLQ99_RS14135 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CLQ99_RS14140 PF07005 Sugar-binding N-terminal domain CLQ99_RS14140 PF17042 Nucleotide-binding C-terminal domain CLQ99_RS14145 PF00465 Iron-containing alcohol dehydrogenase CLQ99_RS14150 PF00701 Dihydrodipicolinate synthetase family CLQ99_RS14165 PF04074 YhcH/YjgK/YiaL CLQ99_RS14175 PF02567 Phenazine biosynthesis-like protein CLQ99_RS14180 PF07690 Major Facilitator Superfamily CLQ99_RS14185 PF01914 MarC family integral membrane protein CLQ99_RS14190 PF01047 MarR family CLQ99_RS14195 PF12833 Helix-turn-helix domain CLQ99_RS14200 PF13999 MarB protein CLQ99_RS14205 PF00892 EamA-like transporter family CLQ99_RS14210 PF07690 Major Facilitator Superfamily CLQ99_RS14220 PF00005 ABC transporter CLQ99_RS14225 PF00005 ABC transporter CLQ99_RS14230 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS14235 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS14240 PF13458 Periplasmic binding protein CLQ99_RS14245 PF01717 Cobalamin-independent synthase, Catalytic domain CLQ99_RS14255 PF12833 Helix-turn-helix domain CLQ99_RS14255 PF01965 DJ-1/PfpI family CLQ99_RS14270 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS14275 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CLQ99_RS14275 PF00703 Glycosyl hydrolases family 2 CLQ99_RS14275 PF02929 Beta galactosidase small chain CLQ99_RS14275 PF16353 Domain of unknown function(DUF4981) CLQ99_RS14275 PF02837 Glycosyl hydrolases family 2, sugar binding domain CLQ99_RS14280 PF01306 LacY proton/sugar symporter CLQ99_RS14285 PF02463 RecF/RecN/SMC N terminal domain CLQ99_RS14300 PF00455 DeoR C terminal sensor domain CLQ99_RS14300 PF08220 DeoR-like helix-turn-helix domain CLQ99_RS14305 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CLQ99_RS14305 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CLQ99_RS14310 PF07005 Sugar-binding N-terminal domain CLQ99_RS14310 PF17042 Nucleotide-binding C-terminal domain CLQ99_RS14315 PF00596 Class II Aldolase and Adducin N-terminal domain CLQ99_RS14320 PF01261 Xylose isomerase-like TIM barrel CLQ99_RS14325 PF02447 GntP family permease CLQ99_RS14330 PF12833 Helix-turn-helix domain CLQ99_RS14345 PF00563 EAL domain CLQ99_RS14345 PF04940 Sensors of blue-light using FAD CLQ99_RS14350 PF02464 Competence-damaged protein CLQ99_RS14355 PF00011 Hsp20/alpha crystallin family CLQ99_RS14365 PF00196 Bacterial regulatory proteins, luxR family CLQ99_RS14365 PF00072 Response regulator receiver domain CLQ99_RS14370 PF02586 SOS response associated peptidase (SRAP) CLQ99_RS14375 PF02311 AraC-like ligand binding domain CLQ99_RS14375 PF12833 Helix-turn-helix domain CLQ99_RS14385 PF01432 Peptidase family M3 CLQ99_RS14390 PF00106 short chain dehydrogenase CLQ99_RS14395 PF07729 FCD domain CLQ99_RS14395 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS14400 PF00582 Universal stress protein family CLQ99_RS14420 PF00480 ROK family CLQ99_RS14425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS14425 PF03466 LysR substrate binding domain CLQ99_RS14430 PF07690 Major Facilitator Superfamily CLQ99_RS14435 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CLQ99_RS14445 PF00089 Trypsin CLQ99_RS14455 PF00893 Small Multidrug Resistance protein CLQ99_RS14460 PF00893 Small Multidrug Resistance protein CLQ99_RS14465 PF01594 AI-2E family transporter CLQ99_RS14470 PF16957 Malonate decarboxylase, alpha subunit, transporter CLQ99_RS14475 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CLQ99_RS14480 PF06857 Malonate decarboxylase delta subunit (MdcD) CLQ99_RS14485 PF01039 Carboxyl transferase domain CLQ99_RS14495 PF03547 Membrane transport protein CLQ99_RS14500 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG CLQ99_RS14505 PF00698 Acyl transferase domain CLQ99_RS14510 PF03466 LysR substrate binding domain CLQ99_RS14510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS14515 PF06039 Malate:quinone oxidoreductase (Mqo) CLQ99_RS14520 PF13580 SIS domain CLQ99_RS14530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS14530 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CLQ99_RS14530 PF00989 PAS fold CLQ99_RS14530 PF17203 Single cache domain 3 CLQ99_RS14535 PF00072 Response regulator receiver domain CLQ99_RS14540 PF02424 ApbE family CLQ99_RS14545 PF00890 FAD binding domain CLQ99_RS14545 PF14537 Cytochrome c3 CLQ99_RS14555 PF00939 Sodium:sulfate symporter transmembrane region CLQ99_RS14560 PF05683 Fumarase C-terminus CLQ99_RS14560 PF05681 Fumarate hydratase (Fumerase) CLQ99_RS14580 PF02627 Carboxymuconolactone decarboxylase family CLQ99_RS14585 PF12146 Serine aminopeptidase, S33 CLQ99_RS14590 PF00206 Lyase CLQ99_RS14590 PF10397 Adenylosuccinate lyase C-terminus CLQ99_RS14595 PF02803 Thiolase, C-terminal domain CLQ99_RS14595 PF00108 Thiolase, N-terminal domain CLQ99_RS14600 PF01144 Coenzyme A transferase CLQ99_RS14605 PF01144 Coenzyme A transferase CLQ99_RS14610 PF01614 Bacterial transcriptional regulator CLQ99_RS14610 PF09339 IclR helix-turn-helix domain CLQ99_RS14615 PF01713 Smr domain CLQ99_RS14620 PF03466 LysR substrate binding domain CLQ99_RS14620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS14625 PF07687 Peptidase dimerisation domain CLQ99_RS14625 PF01546 Peptidase family M20/M25/M40 CLQ99_RS14630 PF01546 Peptidase family M20/M25/M40 CLQ99_RS14635 PF03806 AbgT putative transporter family CLQ99_RS14645 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CLQ99_RS14645 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CLQ99_RS14650 PF00027 Cyclic nucleotide-binding domain CLQ99_RS14650 PF00325 Bacterial regulatory proteins, crp family CLQ99_RS14655 PF00582 Universal stress protein family CLQ99_RS14660 PF15930 Domain of unknown function CLQ99_RS14665 PF02233 NAD(P) transhydrogenase beta subunit CLQ99_RS14670 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CLQ99_RS14670 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CLQ99_RS14670 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CLQ99_RS14680 PF07338 Protein of unknown function (DUF1471) CLQ99_RS14690 PF13520 Amino acid permease CLQ99_RS14700 PF06942 GlpM protein CLQ99_RS14705 PF00072 Response regulator receiver domain CLQ99_RS14705 PF00486 Transcriptional regulatory protein, C terminal CLQ99_RS14715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS14715 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS14715 PF00672 HAMP domain CLQ99_RS14720 PF05472 DNA replication terminus site-binding protein (Ter protein) CLQ99_RS14725 PF00206 Lyase CLQ99_RS14725 PF10415 Fumarase C C-terminus CLQ99_RS14730 PF05681 Fumarate hydratase (Fumerase) CLQ99_RS14730 PF05683 Fumarase C-terminus CLQ99_RS14735 PF01238 Phosphomannose isomerase type I CLQ99_RS14740 PF06097 Bacterial protein of unknown function (DUF945) CLQ99_RS14745 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS14745 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CLQ99_RS14750 PF02378 Phosphotransferase system, EIIC CLQ99_RS14750 PF00367 phosphotransferase system, EIIB CLQ99_RS14755 PF00155 Aminotransferase class I and II CLQ99_RS14765 PF14001 YdfZ protein CLQ99_RS14780 PF04143 Sulphur transport CLQ99_RS14785 PF01206 Sulfurtransferase TusA CLQ99_RS14790 PF07166 Protein of unknown function (DUF1398) CLQ99_RS14795 PF01679 Proteolipid membrane potential modulator CLQ99_RS14800 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLQ99_RS14800 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CLQ99_RS14805 PF00171 Aldehyde dehydrogenase family CLQ99_RS14810 PF02698 DUF218 domain CLQ99_RS14815 PF07690 Major Facilitator Superfamily CLQ99_RS14815 PF00083 Sugar (and other) transporter CLQ99_RS14820 PF00324 Amino acid permease CLQ99_RS14825 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CLQ99_RS14830 PF04996 Succinylarginine dihydrolase CLQ99_RS14835 PF00171 Aldehyde dehydrogenase family CLQ99_RS14840 PF04958 Arginine N-succinyltransferase beta subunit CLQ99_RS14845 PF00202 Aminotransferase class-III CLQ99_RS14850 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CLQ99_RS14850 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CLQ99_RS14855 PF00248 Aldo/keto reductase family CLQ99_RS14860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS14860 PF03466 LysR substrate binding domain CLQ99_RS14875 PF13533 Biotin-lipoyl like CLQ99_RS14880 PF02321 Outer membrane efflux protein CLQ99_RS14885 PF01596 O-methyltransferase CLQ99_RS14890 PF04408 Helicase associated domain (HA2) CLQ99_RS14890 PF11898 Domain of unknown function (DUF3418) CLQ99_RS14890 PF00271 Helicase conserved C-terminal domain CLQ99_RS14890 PF00270 DEAD/DEAH box helicase CLQ99_RS14890 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CLQ99_RS14895 PF02525 Flavodoxin-like fold CLQ99_RS14905 PF00132 Bacterial transferase hexapeptide (six repeats) CLQ99_RS14910 PF07848 PaaX-like protein CLQ99_RS14910 PF08223 PaaX-like protein C-terminal domain CLQ99_RS14915 PF00501 AMP-binding enzyme CLQ99_RS14915 PF14535 AMP-binding enzyme C-terminal domain CLQ99_RS14920 PF02803 Thiolase, C-terminal domain CLQ99_RS14920 PF00108 Thiolase, N-terminal domain CLQ99_RS14925 PF03061 Thioesterase superfamily CLQ99_RS14930 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CLQ99_RS14930 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CLQ99_RS14930 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CLQ99_RS14935 PF00378 Enoyl-CoA hydratase/isomerase CLQ99_RS14940 PF00378 Enoyl-CoA hydratase/isomerase CLQ99_RS14945 PF00111 2Fe-2S iron-sulfur cluster binding domain CLQ99_RS14945 PF00175 Oxidoreductase NAD-binding domain CLQ99_RS14945 PF00970 Oxidoreductase FAD-binding domain CLQ99_RS14950 PF01883 Iron-sulfur cluster assembly protein CLQ99_RS14955 PF05138 Phenylacetic acid catabolic protein CLQ99_RS14960 PF06243 Phenylacetic acid degradation B CLQ99_RS14965 PF05138 Phenylacetic acid catabolic protein CLQ99_RS14970 PF00171 Aldehyde dehydrogenase family CLQ99_RS14970 PF01575 MaoC like domain CLQ99_RS14985 PF07833 Copper amine oxidase N-terminal domain CLQ99_RS14985 PF02727 Copper amine oxidase, N2 domain CLQ99_RS14985 PF02728 Copper amine oxidase, N3 domain CLQ99_RS14985 PF01179 Copper amine oxidase, enzyme domain CLQ99_RS14995 PF08546 Ketopantoate reductase PanE/ApbA C terminal CLQ99_RS14995 PF02558 Ketopantoate reductase PanE/ApbA CLQ99_RS15000 PF00171 Aldehyde dehydrogenase family CLQ99_RS15005 PF12833 Helix-turn-helix domain CLQ99_RS15005 PF14525 AraC-binding-like domain CLQ99_RS15010 PF07027 Protein of unknown function (DUF1318) CLQ99_RS15015 PF13617 YnbE-like lipoprotein CLQ99_RS15020 PF11739 Dicarboxylate transport CLQ99_RS15025 PF09335 SNARE associated Golgi protein CLQ99_RS15030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLQ99_RS15030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLQ99_RS15035 PF03724 META domain CLQ99_RS15040 PF03891 Domain of unknown function (DUF333) CLQ99_RS15050 PF10371 Domain of unknown function CLQ99_RS15050 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CLQ99_RS15050 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CLQ99_RS15050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ99_RS15050 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CLQ99_RS15055 PF00267 Gram-negative porin CLQ99_RS15065 PF00582 Universal stress protein family CLQ99_RS15070 PF01171 PP-loop family CLQ99_RS15075 PF00271 Helicase conserved C-terminal domain CLQ99_RS15075 PF00270 DEAD/DEAH box helicase CLQ99_RS15075 PF03880 DbpA RNA binding domain CLQ99_RS15080 PF01544 CorA-like Mg2+ transporter protein CLQ99_RS15090 PF00455 DeoR C terminal sensor domain CLQ99_RS15090 PF08220 DeoR-like helix-turn-helix domain CLQ99_RS15095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ99_RS15095 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLQ99_RS15110 PF00324 Amino acid permease CLQ99_RS15115 PF01037 Lrp/AsnC ligand binding domain CLQ99_RS15125 PF00155 Aminotransferase class I and II CLQ99_RS15130 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS15135 PF00005 ABC transporter CLQ99_RS15135 PF09383 NIL domain CLQ99_RS15140 PF03180 NLPA lipoprotein CLQ99_RS15145 PF00155 Aminotransferase class I and II CLQ99_RS15150 PF08240 Alcohol dehydrogenase GroES-like domain CLQ99_RS15150 PF00107 Zinc-binding dehydrogenase CLQ99_RS15155 PF00440 Bacterial regulatory proteins, tetR family CLQ99_RS15165 PF00753 Metallo-beta-lactamase superfamily CLQ99_RS15170 PF03466 LysR substrate binding domain CLQ99_RS15170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS15175 PF03466 LysR substrate binding domain CLQ99_RS15175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS15200 PF00440 Bacterial regulatory proteins, tetR family CLQ99_RS15285 PF04717 Type VI secretion system, phage-baseplate injector CLQ99_RS15285 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) CLQ99_RS15285 PF13296 Putative type VI secretion system Rhs element Vgr CLQ99_RS15290 PF17871 AAA lid domain CLQ99_RS15290 PF07724 AAA domain (Cdc48 subfamily) CLQ99_RS15290 PF10431 C-terminal, D2-small domain, of ClpB protein CLQ99_RS15290 PF00004 ATPase family associated with various cellular activities (AAA) CLQ99_RS15300 PF13488 Glycine zipper CLQ99_RS15300 PF00691 OmpA family CLQ99_RS15315 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CLQ99_RS15325 PF01609 Transposase DDE domain CLQ99_RS15325 PF05598 Transposase domain (DUF772) CLQ99_RS15335 PF06183 DinI-like family CLQ99_RS15425 PF01551 Peptidase family M23 CLQ99_RS15425 PF01464 Transglycosylase SLT domain CLQ99_RS15425 PF10145 Phage-related minor tail protein CLQ99_RS15495 PF06381 Protein of unknown function (DUF1073) CLQ99_RS15500 PF17288 Terminase RNAseH like domain CLQ99_RS15500 PF04466 Phage terminase large subunit CLQ99_RS15525 PF00959 Phage lysozyme CLQ99_RS15535 PF03589 Antitermination protein CLQ99_RS15565 PF00717 Peptidase S24-like CLQ99_RS15565 PF01381 Helix-turn-helix CLQ99_RS15640 PF13356 Arm DNA-binding domain CLQ99_RS15640 PF14659 Phage integrase, N-terminal SAM-like domain CLQ99_RS15640 PF00589 Phage integrase family CLQ99_RS15645 PF01965 DJ-1/PfpI family CLQ99_RS15650 PF01966 HD domain CLQ99_RS15660 PF03466 LysR substrate binding domain CLQ99_RS15660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS15680 PF00248 Aldo/keto reductase family CLQ99_RS15685 PF07690 Major Facilitator Superfamily CLQ99_RS15690 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CLQ99_RS15695 PF03466 LysR substrate binding domain CLQ99_RS15695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS15710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ99_RS15715 PF00246 Zinc carboxypeptidase CLQ99_RS15720 PF13378 Enolase C-terminal domain-like CLQ99_RS15720 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CLQ99_RS15725 PF08534 Redoxin CLQ99_RS15730 PF05145 Transition state regulatory protein AbrB CLQ99_RS15735 PF00158 Sigma-54 interaction domain CLQ99_RS15735 PF18024 Helix-turn-helix domain CLQ99_RS15740 PF11975 Family 4 glycosyl hydrolase C-terminal domain CLQ99_RS15740 PF02056 Family 4 glycosyl hydrolase CLQ99_RS15745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS15745 PF03466 LysR substrate binding domain CLQ99_RS15750 PF05128 Domain of unknown function (DUF697) CLQ99_RS15755 PF04317 YcjX-like family, DUF463 CLQ99_RS15760 PF09584 Phage shock protein PspD (Phageshock_PspD) CLQ99_RS15765 PF04024 PspC domain CLQ99_RS15770 PF06667 Phage shock protein B CLQ99_RS15775 PF04012 PspA/IM30 family CLQ99_RS15780 PF00158 Sigma-54 interaction domain CLQ99_RS15780 PF02954 Bacterial regulatory protein, Fis family CLQ99_RS15785 PF07690 Major Facilitator Superfamily CLQ99_RS15790 PF01546 Peptidase family M20/M25/M40 CLQ99_RS15790 PF07687 Peptidase dimerisation domain CLQ99_RS15795 PF12833 Helix-turn-helix domain CLQ99_RS15805 PF13460 NAD(P)H-binding CLQ99_RS15810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ99_RS15815 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS15820 PF02586 SOS response associated peptidase (SRAP) CLQ99_RS15830 PF11799 impB/mucB/samB family C-terminal domain CLQ99_RS15830 PF00817 impB/mucB/samB family CLQ99_RS15830 PF13438 Domain of unknown function (DUF4113) CLQ99_RS15830 PF11798 IMS family HHH motif CLQ99_RS15835 PF00717 Peptidase S24-like CLQ99_RS15840 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLQ99_RS15865 PF13610 DDE domain CLQ99_RS15875 PF00893 Small Multidrug Resistance protein CLQ99_RS15880 PF13427 Domain of unknown function (DUF4111) CLQ99_RS15890 PF13610 DDE domain CLQ99_RS15920 PF00149 Calcineurin-like phosphoesterase CLQ99_RS16040 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS16040 PF12911 N-terminal TM domain of oligopeptide transport permease C CLQ99_RS16045 PF00005 ABC transporter CLQ99_RS16045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ99_RS16050 PF00005 ABC transporter CLQ99_RS16055 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CLQ99_RS16060 PF05962 HutD CLQ99_RS16075 PF00575 S1 RNA binding domain CLQ99_RS16075 PF17876 Cold shock domain CLQ99_RS16075 PF00773 RNB domain CLQ99_RS16075 PF08206 Ribonuclease B OB domain CLQ99_RS16085 PF08220 DeoR-like helix-turn-helix domain CLQ99_RS16085 PF00455 DeoR C terminal sensor domain CLQ99_RS16090 PF05433 Glycine zipper 2TM domain CLQ99_RS16095 PF01253 Translation initiation factor SUI1 CLQ99_RS16100 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CLQ99_RS16105 PF18073 Rubredoxin metal binding domain CLQ99_RS16110 PF06305 Lipopolysaccharide assembly protein A domain CLQ99_RS16115 PF01569 PAP2 superfamily CLQ99_RS16120 PF00925 GTP cyclohydrolase II CLQ99_RS16125 PF00694 Aconitase C-terminal domain CLQ99_RS16125 PF00330 Aconitase family (aconitate hydratase) CLQ99_RS16140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS16140 PF03466 LysR substrate binding domain CLQ99_RS16145 PF08272 Topoisomerase I zinc-ribbon-like CLQ99_RS16145 PF01396 Topoisomerase DNA binding C4 zinc finger CLQ99_RS16145 PF01751 Toprim domain CLQ99_RS16145 PF01131 DNA topoisomerase CLQ99_RS16150 PF10692 Protein of unknown function (DUF2498) CLQ99_RS16155 PF01343 Peptidase family S49 CLQ99_RS16155 PF08496 Peptidase family S49 N-terminal CLQ99_RS16165 PF00106 short chain dehydrogenase CLQ99_RS16170 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CLQ99_RS16170 PF12557 Cob(I)alamin adenosyltransferase N terminal CLQ99_RS16175 PF00849 RNA pseudouridylate synthase CLQ99_RS16175 PF01479 S4 domain CLQ99_RS16180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS16180 PF03466 LysR substrate binding domain CLQ99_RS16190 PF01300 Telomere recombination CLQ99_RS16195 PF02811 PHP domain CLQ99_RS16200 PF04715 Anthranilate synthase component I, N terminal region CLQ99_RS16200 PF00425 chorismate binding enzyme CLQ99_RS16205 PF00117 Glutamine amidotransferase class-I CLQ99_RS16205 PF02885 Glycosyl transferase family, helical bundle domain CLQ99_RS16205 PF00591 Glycosyl transferase family, a/b domain CLQ99_RS16210 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CLQ99_RS16210 PF00218 Indole-3-glycerol phosphate synthase CLQ99_RS16215 PF00291 Pyridoxal-phosphate dependent enzyme CLQ99_RS16220 PF00290 Tryptophan synthase alpha chain CLQ99_RS16225 PF05161 MOFRL family CLQ99_RS16225 PF13660 Domain of unknown function (DUF4147) CLQ99_RS16230 PF00180 Isocitrate/isopropylmalate dehydrogenase CLQ99_RS16235 PF07690 Major Facilitator Superfamily CLQ99_RS16240 PF03466 LysR substrate binding domain CLQ99_RS16240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS16260 PF00106 short chain dehydrogenase CLQ99_RS16265 PF00593 TonB dependent receptor CLQ99_RS16265 PF07715 TonB-dependent Receptor Plug Domain CLQ99_RS16270 PF13640 2OG-Fe(II) oxygenase superfamily CLQ99_RS16270 PF18331 PKHD-type hydroxylase C-terminal domain CLQ99_RS16275 PF03922 OmpW family CLQ99_RS16280 PF03692 Putative zinc- or iron-chelating domain CLQ99_RS16290 PF04279 Intracellular septation protein A CLQ99_RS16295 PF07715 TonB-dependent Receptor Plug Domain CLQ99_RS16295 PF00593 TonB dependent receptor CLQ99_RS16300 PF03061 Thioesterase superfamily CLQ99_RS16305 PF14002 YniB-like protein CLQ99_RS16310 PF13419 Haloacid dehalogenase-like hydrolase CLQ99_RS16320 PF04307 LexA-binding, inner membrane-associated putative hydrolase CLQ99_RS16325 PF00375 Sodium:dicarboxylate symporter family CLQ99_RS16330 PF10729 Cell division activator CedA CLQ99_RS16335 PF00199 Catalase CLQ99_RS16335 PF06628 Catalase-related immune-responsive CLQ99_RS16335 PF18011 C-terminal domain found in long catalases CLQ99_RS16340 PF04794 YdjC-like protein CLQ99_RS16345 PF02056 Family 4 glycosyl hydrolase CLQ99_RS16345 PF11975 Family 4 glycosyl hydrolase C-terminal domain CLQ99_RS16350 PF07883 Cupin domain CLQ99_RS16350 PF12833 Helix-turn-helix domain CLQ99_RS16355 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CLQ99_RS16360 PF02378 Phosphotransferase system, EIIC CLQ99_RS16365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ99_RS16370 PF04355 SmpA / OmlA family CLQ99_RS16375 PF02540 NAD synthase CLQ99_RS16385 PF07813 LTXXQ motif family protein CLQ99_RS16390 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family CLQ99_RS16395 PF04996 Succinylarginine dihydrolase CLQ99_RS16400 PF00171 Aldehyde dehydrogenase family CLQ99_RS16405 PF04958 Arginine N-succinyltransferase beta subunit CLQ99_RS16410 PF00202 Aminotransferase class-III CLQ99_RS16415 PF03372 Endonuclease/Exonuclease/phosphatase family CLQ99_RS16420 PF09335 SNARE associated Golgi protein CLQ99_RS16425 PF09335 SNARE associated Golgi protein CLQ99_RS16430 PF02627 Carboxymuconolactone decarboxylase family CLQ99_RS16435 PF13416 Bacterial extracellular solute-binding protein CLQ99_RS16440 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS16445 PF00005 ABC transporter CLQ99_RS16450 PF00581 Rhodanese-like domain CLQ99_RS16455 PF01066 CDP-alcohol phosphatidyltransferase CLQ99_RS16460 PF00293 NUDIX domain CLQ99_RS16465 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CLQ99_RS16465 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CLQ99_RS16470 PF08659 KR domain CLQ99_RS16470 PF02801 Beta-ketoacyl synthase, C-terminal domain CLQ99_RS16470 PF08240 Alcohol dehydrogenase GroES-like domain CLQ99_RS16470 PF16197 Ketoacyl-synthetase C-terminal extension CLQ99_RS16470 PF00109 Beta-ketoacyl synthase, N-terminal domain CLQ99_RS16470 PF00698 Acyl transferase domain CLQ99_RS16470 PF14765 Polyketide synthase dehydratase CLQ99_RS16470 PF00550 Phosphopantetheine attachment site CLQ99_RS16475 PF01131 DNA topoisomerase CLQ99_RS16475 PF01751 Toprim domain CLQ99_RS16480 PF00586 AIR synthase related protein, N-terminal domain CLQ99_RS16480 PF02769 AIR synthase related protein, C-terminal domain CLQ99_RS16485 PF01569 PAP2 superfamily CLQ99_RS16500 PF00881 Nitroreductase family CLQ99_RS16505 PF01343 Peptidase family S49 CLQ99_RS16510 PF17763 Glutaminase/Asparaginase C-terminal domain CLQ99_RS16510 PF00710 Asparaginase, N-terminal CLQ99_RS16515 PF00857 Isochorismatase family CLQ99_RS16520 PF00083 Sugar (and other) transporter CLQ99_RS16525 PF08220 DeoR-like helix-turn-helix domain CLQ99_RS16525 PF00455 DeoR C terminal sensor domain CLQ99_RS16530 PF00248 Aldo/keto reductase family CLQ99_RS16535 PF00294 pfkB family carbohydrate kinase CLQ99_RS16540 PF01116 Fructose-bisphosphate aldolase class-II CLQ99_RS16545 PF08240 Alcohol dehydrogenase GroES-like domain CLQ99_RS16545 PF00107 Zinc-binding dehydrogenase CLQ99_RS16550 PF00083 Sugar (and other) transporter CLQ99_RS16555 PF08240 Alcohol dehydrogenase GroES-like domain CLQ99_RS16555 PF00107 Zinc-binding dehydrogenase CLQ99_RS16560 PF00704 Glycosyl hydrolases family 18 CLQ99_RS16560 PF00041 Fibronectin type III domain CLQ99_RS16565 PF01844 HNH endonuclease CLQ99_RS16570 PF07023 Protein of unknown function (DUF1315) CLQ99_RS16575 PF01641 SelR domain CLQ99_RS16580 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CLQ99_RS16580 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CLQ99_RS16585 PF01263 Aldose 1-epimerase CLQ99_RS16595 PF06629 MltA-interacting protein MipA CLQ99_RS16600 PF06798 PrkA serine protein kinase C-terminal domain CLQ99_RS16600 PF08298 PrkA AAA domain CLQ99_RS16605 PF04285 Protein of unknown function (DUF444) CLQ99_RS16615 PF00255 Glutathione peroxidase CLQ99_RS16625 PF03466 LysR substrate binding domain CLQ99_RS16625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS16630 PF07690 Major Facilitator Superfamily CLQ99_RS16640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS16640 PF03466 LysR substrate binding domain CLQ99_RS16645 PF11799 impB/mucB/samB family C-terminal domain CLQ99_RS16645 PF13438 Domain of unknown function (DUF4113) CLQ99_RS16645 PF11798 IMS family HHH motif CLQ99_RS16645 PF00817 impB/mucB/samB family CLQ99_RS16650 PF00717 Peptidase S24-like CLQ99_RS16655 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLQ99_RS16665 PF06183 DinI-like family CLQ99_RS16670 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CLQ99_RS16675 PF04073 Aminoacyl-tRNA editing domain CLQ99_RS16680 PF04284 Protein of unknown function (DUF441) CLQ99_RS16685 PF12833 Helix-turn-helix domain CLQ99_RS16685 PF02311 AraC-like ligand binding domain CLQ99_RS16690 PF07690 Major Facilitator Superfamily CLQ99_RS16695 PF06418 CTP synthase N-terminus CLQ99_RS16695 PF00117 Glutamine amidotransferase class-I CLQ99_RS16700 PF04463 Protein of unknown function (DUF523) CLQ99_RS16705 PF04343 Protein of unknown function, DUF488 CLQ99_RS16710 PF03891 Domain of unknown function (DUF333) CLQ99_RS16715 PF00990 Diguanylate cyclase, GGDEF domain CLQ99_RS16715 PF13185 GAF domain CLQ99_RS16735 PF10749 Protein of unknown function (DUF2534) CLQ99_RS16740 PF01810 LysE type translocator CLQ99_RS16745 PF03279 Bacterial lipid A biosynthesis acyltransferase CLQ99_RS16755 PF00710 Asparaginase, N-terminal CLQ99_RS16755 PF17763 Glutaminase/Asparaginase C-terminal domain CLQ99_RS16760 PF01966 HD domain CLQ99_RS16765 PF00990 Diguanylate cyclase, GGDEF domain CLQ99_RS16770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS16770 PF03466 LysR substrate binding domain CLQ99_RS16775 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CLQ99_RS16800 PF02322 Cytochrome bd terminal oxidase subunit II CLQ99_RS16805 PF01654 Cytochrome bd terminal oxidase subunit I CLQ99_RS16810 PF05067 Manganese containing catalase CLQ99_RS16815 PF05974 Domain of unknown function (DUF892) CLQ99_RS16820 PF05974 Domain of unknown function (DUF892) CLQ99_RS16825 PF10685 Stress-induced bacterial acidophilic repeat motif CLQ99_RS16830 PF08240 Alcohol dehydrogenase GroES-like domain CLQ99_RS16830 PF13823 Alcohol dehydrogenase GroES-associated CLQ99_RS16830 PF00107 Zinc-binding dehydrogenase CLQ99_RS16835 PF06906 Protein of unknown function (DUF1272) CLQ99_RS16855 PF00180 Isocitrate/isopropylmalate dehydrogenase CLQ99_RS16945 PF01343 Peptidase family S49 CLQ99_RS16960 PF03354 Phage Terminase CLQ99_RS17000 PF00959 Phage lysozyme CLQ99_RS17005 PF04971 Bacteriophage P21 holin S CLQ99_RS17020 PF06147 Protein of unknown function (DUF968) CLQ99_RS17030 PF00717 Peptidase S24-like CLQ99_RS17030 PF01726 LexA DNA binding domain CLQ99_RS17040 PF06183 DinI-like family CLQ99_RS17045 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLQ99_RS17055 PF13286 Phosphohydrolase-associated domain CLQ99_RS17055 PF01966 HD domain CLQ99_RS17085 PF17948 DnaT DNA-binding domain CLQ99_RS17100 PF01381 Helix-turn-helix CLQ99_RS17125 PF06630 Enterobacterial exodeoxyribonuclease VIII CLQ99_RS17125 PF12684 PDDEXK-like domain of unknown function (DUF3799) CLQ99_RS17130 PF07825 Excisionase-like protein CLQ99_RS17135 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain CLQ99_RS17135 PF00589 Phage integrase family CLQ99_RS17140 PF00180 Isocitrate/isopropylmalate dehydrogenase CLQ99_RS17145 PF00849 RNA pseudouridylate synthase CLQ99_RS17150 PF00293 NUDIX domain CLQ99_RS17160 PF04356 Protein of unknown function (DUF489) CLQ99_RS17165 PF08328 Adenylosuccinate lyase C-terminal CLQ99_RS17165 PF00206 Lyase CLQ99_RS17180 PF00486 Transcriptional regulatory protein, C terminal CLQ99_RS17180 PF00072 Response regulator receiver domain CLQ99_RS17185 PF08918 PhoQ Sensor CLQ99_RS17185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS17190 PF08007 Cupin superfamily protein CLQ99_RS17195 PF01546 Peptidase family M20/M25/M40 CLQ99_RS17195 PF07687 Peptidase dimerisation domain CLQ99_RS17200 PF08402 TOBE domain CLQ99_RS17200 PF00005 ABC transporter CLQ99_RS17205 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS17210 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS17215 PF13416 Bacterial extracellular solute-binding protein CLQ99_RS17225 PF00501 AMP-binding enzyme CLQ99_RS17225 PF13193 AMP-binding enzyme C-terminal domain CLQ99_RS17235 PF02146 Sir2 family CLQ99_RS17240 PF00480 ROK family CLQ99_RS17245 PF12704 MacB-like periplasmic core domain CLQ99_RS17245 PF02687 FtsX-like permease family CLQ99_RS17250 PF00005 ABC transporter CLQ99_RS17255 PF02687 FtsX-like permease family CLQ99_RS17255 PF12704 MacB-like periplasmic core domain CLQ99_RS17260 PF00271 Helicase conserved C-terminal domain CLQ99_RS17260 PF17757 UvrB interaction domain CLQ99_RS17260 PF03461 TRCF domain CLQ99_RS17260 PF00270 DEAD/DEAH box helicase CLQ99_RS17260 PF02559 CarD-like/TRCF domain CLQ99_RS17265 PF01476 LysM domain CLQ99_RS17265 PF03734 L,D-transpeptidase catalytic domain CLQ99_RS17265 PF17969 L,D-transpeptidase C-terminal domain CLQ99_RS17270 PF07338 Protein of unknown function (DUF1471) CLQ99_RS17275 PF00440 Bacterial regulatory proteins, tetR family CLQ99_RS17280 PF07715 TonB-dependent Receptor Plug Domain CLQ99_RS17280 PF00593 TonB dependent receptor CLQ99_RS17285 PF05433 Glycine zipper 2TM domain CLQ99_RS17290 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ99_RS17295 PF05728 Uncharacterised protein family (UPF0227) CLQ99_RS17300 PF00933 Glycosyl hydrolase family 3 N terminal domain CLQ99_RS17305 PF01636 Phosphotransferase enzyme family CLQ99_RS17310 PF13036 Peptidoglycan-synthase activator LpoB CLQ99_RS17315 PF07233 Protein of unknown function (DUF1425) CLQ99_RS17320 PF01230 HIT domain CLQ99_RS17325 PF02378 Phosphotransferase system, EIIC CLQ99_RS17325 PF00367 phosphotransferase system, EIIB CLQ99_RS17330 PF01026 TatD related DNase CLQ99_RS17335 PF09115 DNA polymerase III, delta subunit, C terminal CLQ99_RS17340 PF02223 Thymidylate kinase CLQ99_RS17345 PF02618 YceG-like family CLQ99_RS17350 PF01063 Amino-transferase class IV CLQ99_RS17355 PF02801 Beta-ketoacyl synthase, C-terminal domain CLQ99_RS17355 PF00109 Beta-ketoacyl synthase, N-terminal domain CLQ99_RS17360 PF00550 Phosphopantetheine attachment site CLQ99_RS17370 PF00698 Acyl transferase domain CLQ99_RS17375 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLQ99_RS17375 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CLQ99_RS17380 PF02504 Fatty acid synthesis protein CLQ99_RS17385 PF01783 Ribosomal L32p protein family CLQ99_RS17390 PF02620 Large ribosomal RNA subunit accumulation protein YceD CLQ99_RS17395 PF02545 Maf-like protein CLQ99_RS17400 PF00849 RNA pseudouridylate synthase CLQ99_RS17400 PF01479 S4 domain CLQ99_RS17410 PF12111 Polyribonucleotide phosphorylase C terminal CLQ99_RS17410 PF00575 S1 RNA binding domain CLQ99_RS17410 PF10150 Ribonuclease E/G family CLQ99_RS17415 PF03466 LysR substrate binding domain CLQ99_RS17415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS17420 PF07690 Major Facilitator Superfamily CLQ99_RS17425 PF03023 Lipid II flippase MurJ CLQ99_RS17430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ99_RS17435 PF04337 Protein of unknown function, DUF480 CLQ99_RS17440 PF13302 Acetyltransferase (GNAT) domain CLQ99_RS17445 PF07690 Major Facilitator Superfamily CLQ99_RS17450 PF07273 Protein of unknown function (DUF1439) CLQ99_RS17455 PF01979 Amidohydrolase family CLQ99_RS17460 PF06183 DinI-like family CLQ99_RS17470 PF13991 BssS protein family CLQ99_RS17475 PF01266 FAD dependent oxidoreductase CLQ99_RS17480 PF10968 Protein of unknown function (DUF2770) CLQ99_RS17485 PF12368 Rhodanase C-terminal CLQ99_RS17485 PF00581 Rhodanese-like domain CLQ99_RS17485 PF17773 UPF0176 acylphosphatase like domain CLQ99_RS17490 PF03279 Bacterial lipid A biosynthesis acyltransferase CLQ99_RS17500 PF07690 Major Facilitator Superfamily CLQ99_RS17505 PF13984 MsyB protein CLQ99_RS17510 PF07119 Protein of unknown function (DUF1375) CLQ99_RS17515 PF00535 Glycosyl transferase family 2 CLQ99_RS17520 PF04349 Periplasmic glucan biosynthesis protein, MdoG CLQ99_RS17530 PF01757 Acyltransferase family CLQ99_RS17535 PF13977 BetI-type transcriptional repressor, C-terminal CLQ99_RS17535 PF00440 Bacterial regulatory proteins, tetR family CLQ99_RS17540 PF01661 Macro domain CLQ99_RS17545 PF06496 Protein of unknown function (DUF1097) CLQ99_RS17550 PF02613 Nitrate reductase delta subunit CLQ99_RS17555 PF02811 PHP domain CLQ99_RS17560 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLQ99_RS17575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS17575 PF03466 LysR substrate binding domain CLQ99_RS17580 PF02678 Pirin CLQ99_RS17580 PF05726 Pirin C-terminal cupin domain CLQ99_RS17585 PF00857 Isochorismatase family CLQ99_RS17595 PF01323 DSBA-like thioredoxin domain CLQ99_RS17600 PF02562 PhoH-like protein CLQ99_RS17605 PF04261 Dyp-type peroxidase family CLQ99_RS17610 PF09375 Imelysin CLQ99_RS17610 PF13473 Cupredoxin-like domain CLQ99_RS17615 PF03239 Iron permease FTR1 family CLQ99_RS17620 PF01773 Na+ dependent nucleoside transporter N-terminus CLQ99_RS17620 PF07662 Na+ dependent nucleoside transporter C-terminus CLQ99_RS17620 PF07670 Nucleoside recognition CLQ99_RS17630 PF00474 Sodium:solute symporter family CLQ99_RS17635 PF00171 Aldehyde dehydrogenase family CLQ99_RS17635 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CLQ99_RS17635 PF14850 DNA-binding domain of Proline dehydrogenase CLQ99_RS17635 PF01619 Proline dehydrogenase CLQ99_RS17645 PF08362 YcdC-like protein, C-terminal region CLQ99_RS17645 PF00440 Bacterial regulatory proteins, tetR family CLQ99_RS17650 PF00296 Luciferase-like monooxygenase CLQ99_RS17655 PF00857 Isochorismatase family CLQ99_RS17660 PF01042 Endoribonuclease L-PSP CLQ99_RS17665 PF00561 alpha/beta hydrolase fold CLQ99_RS17670 PF00881 Nitroreductase family CLQ99_RS17675 PF01613 Flavin reductase like domain CLQ99_RS17680 PF00860 Permease family CLQ99_RS17695 PF10685 Stress-induced bacterial acidophilic repeat motif CLQ99_RS17700 PF03358 NADPH-dependent FMN reductase CLQ99_RS17705 PF13993 YccJ-like protein CLQ99_RS17870 PF05840 Bacteriophage replication gene A protein (GPA) CLQ99_RS17875 PF00145 C-5 cytosine-specific DNA methylase CLQ99_RS17880 PF02086 D12 class N6 adenine-specific DNA methyltransferase CLQ99_RS17920 PF02899 Phage integrase, N-terminal SAM-like domain CLQ99_RS17920 PF00589 Phage integrase family CLQ99_RS17925 PF00328 Histidine phosphatase superfamily (branch 2) CLQ99_RS17930 PF01638 HxlR-like helix-turn-helix CLQ99_RS17950 PF00324 Amino acid permease CLQ99_RS17960 PF00120 Glutamine synthetase, catalytic domain CLQ99_RS17965 PF07722 Peptidase C26 CLQ99_RS17970 PF07883 Cupin domain CLQ99_RS17970 PF01381 Helix-turn-helix CLQ99_RS17975 PF00171 Aldehyde dehydrogenase family CLQ99_RS17980 PF01266 FAD dependent oxidoreductase CLQ99_RS17985 PF03466 LysR substrate binding domain CLQ99_RS17985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS17990 PF00180 Isocitrate/isopropylmalate dehydrogenase CLQ99_RS18000 PF02028 BCCT, betaine/carnitine/choline family transporter CLQ99_RS18005 PF00355 Rieske [2Fe-2S] domain CLQ99_RS18005 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CLQ99_RS18010 PF00171 Aldehyde dehydrogenase family CLQ99_RS18015 PF00970 Oxidoreductase FAD-binding domain CLQ99_RS18015 PF00175 Oxidoreductase NAD-binding domain CLQ99_RS18015 PF00111 2Fe-2S iron-sulfur cluster binding domain CLQ99_RS18025 PF12792 CSS motif domain associated with EAL CLQ99_RS18025 PF00563 EAL domain CLQ99_RS18030 PF00563 EAL domain CLQ99_RS18030 PF12792 CSS motif domain associated with EAL CLQ99_RS18040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ99_RS18045 PF01027 Inhibitor of apoptosis-promoting Bax1 CLQ99_RS18050 PF04358 DsrC like protein CLQ99_RS18055 PF00708 Acylphosphatase CLQ99_RS18060 PF12833 Helix-turn-helix domain CLQ99_RS18065 PF01161 Phosphatidylethanolamine-binding protein CLQ99_RS18070 PF17785 PUA-like domain CLQ99_RS18070 PF10672 S-adenosylmethionine-dependent methyltransferase CLQ99_RS18075 PF08755 Hemimethylated DNA-binding protein YccV like CLQ99_RS18080 PF13380 CoA binding domain CLQ99_RS18085 PF02142 MGS-like domain CLQ99_RS18090 PF13361 UvrD-like helicase C-terminal domain CLQ99_RS18090 PF00580 UvrD/REP helicase N-terminal domain CLQ99_RS18090 PF12462 DNA helicase IV / RNA helicase N terminal CLQ99_RS18095 PF03733 Inner membrane component domain CLQ99_RS18100 PF12805 FUSC-like inner membrane protein yccS CLQ99_RS18105 PF04993 TfoX N-terminal domain CLQ99_RS18105 PF04994 TfoX C-terminal domain CLQ99_RS18115 PF03846 Cell division inhibitor SulA CLQ99_RS18120 PF00691 OmpA family CLQ99_RS18120 PF01389 OmpA-like transmembrane domain CLQ99_RS18125 PF17414 MatP C-terminal ribbon-helix-helix domain CLQ99_RS18125 PF06303 MatP N-terminal domain CLQ99_RS18130 PF05362 Lon protease (S16) C-terminal proteolytic domain CLQ99_RS18130 PF13654 AAA domain CLQ99_RS18135 PF07977 FabA-like domain CLQ99_RS18140 PF04957 Ribosome modulation factor CLQ99_RS18145 PF03886 ABC-type transport auxiliary lipoprotein component CLQ99_RS18150 PF02470 MlaD protein CLQ99_RS18155 PF04403 Paraquat-inducible protein A CLQ99_RS18160 PF16326 ABC transporter C-terminal domain CLQ99_RS18160 PF12848 ABC transporter CLQ99_RS18160 PF00005 ABC transporter CLQ99_RS18165 PF10672 S-adenosylmethionine-dependent methyltransferase CLQ99_RS18165 PF01170 Putative RNA methylase family UPF0020 CLQ99_RS18165 PF02926 THUMP domain CLQ99_RS18170 PF03473 MOSC domain CLQ99_RS18170 PF00111 2Fe-2S iron-sulfur cluster binding domain CLQ99_RS18170 PF03476 MOSC N-terminal beta barrel domain CLQ99_RS18175 PF07126 Cell-division protein ZapC CLQ99_RS18180 PF01180 Dihydroorotate dehydrogenase CLQ99_RS18185 PF03358 NADPH-dependent FMN reductase CLQ99_RS18190 PF09084 NMT1/THI5 like CLQ99_RS18195 PF00296 Luciferase-like monooxygenase CLQ99_RS18200 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS18205 PF00005 ABC transporter CLQ99_RS18210 PF01433 Peptidase family M1 domain CLQ99_RS18210 PF11940 Domain of unknown function (DUF3458) Ig-like fold CLQ99_RS18210 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CLQ99_RS18215 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CLQ99_RS18215 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CLQ99_RS18220 PF01546 Peptidase family M20/M25/M40 CLQ99_RS18220 PF07687 Peptidase dimerisation domain CLQ99_RS18225 PF07687 Peptidase dimerisation domain CLQ99_RS18225 PF01546 Peptidase family M20/M25/M40 CLQ99_RS18235 PF00291 Pyridoxal-phosphate dependent enzyme CLQ99_RS18240 PF01037 Lrp/AsnC ligand binding domain CLQ99_RS18245 PF00152 tRNA synthetases class II (D, K and N) CLQ99_RS18245 PF01336 OB-fold nucleic acid binding domain CLQ99_RS18255 PF00155 Aminotransferase class I and II CLQ99_RS18260 PF00753 Metallo-beta-lactamase superfamily CLQ99_RS18265 PF05951 Bacterial protein of unknown function (DUF882) CLQ99_RS18270 PF03734 L,D-transpeptidase catalytic domain CLQ99_RS18270 PF01471 Putative peptidoglycan binding domain CLQ99_RS18275 PF04310 MukB N-terminal CLQ99_RS18275 PF16330 MukB hinge domain CLQ99_RS18280 PF04288 MukE-like family CLQ99_RS18285 PF17193 MukF C-terminal domain CLQ99_RS18285 PF03882 MukF winged-helix domain CLQ99_RS18285 PF17192 MukF middle domain CLQ99_RS18290 PF13847 Methyltransferase domain CLQ99_RS18295 PF02698 DUF218 domain CLQ99_RS18300 PF01636 Phosphotransferase enzyme family CLQ99_RS18305 PF02348 Cytidylyltransferase CLQ99_RS18310 PF03966 Trm112p-like protein CLQ99_RS18315 PF06224 Winged helix DNA-binding domain CLQ99_RS18320 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CLQ99_RS18325 PF00005 ABC transporter CLQ99_RS18325 PF00664 ABC transporter transmembrane region CLQ99_RS18330 PF00753 Metallo-beta-lactamase superfamily CLQ99_RS18330 PF03772 Competence protein CLQ99_RS18335 PF00216 Bacterial DNA-binding protein CLQ99_RS18340 PF00575 S1 RNA binding domain CLQ99_RS18345 PF02224 Cytidylate kinase CLQ99_RS18350 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CLQ99_RS18355 PF00266 Aminotransferase class-V CLQ99_RS18360 PF04239 Protein of unknown function (DUF421) CLQ99_RS18365 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CLQ99_RS18365 PF18381 YcaO cyclodehydratase C-terminal domain CLQ99_RS18370 PF01226 Formate/nitrite transporter CLQ99_RS18375 PF01228 Glycine radical CLQ99_RS18375 PF02901 Pyruvate formate lyase-like CLQ99_RS18380 PF04055 Radical SAM superfamily CLQ99_RS18385 PF07690 Major Facilitator Superfamily CLQ99_RS18395 PF04976 DMSO reductase anchor subunit (DmsC) CLQ99_RS18400 PF13247 4Fe-4S dicluster domain CLQ99_RS18400 PF12800 4Fe-4S binding domain CLQ99_RS18405 PF01568 Molydopterin dinucleotide binding domain CLQ99_RS18405 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLQ99_RS18405 PF00384 Molybdopterin oxidoreductase CLQ99_RS18410 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLQ99_RS18410 PF02403 Seryl-tRNA synthetase N-terminal domain CLQ99_RS18415 PF00004 ATPase family associated with various cellular activities (AAA) CLQ99_RS18415 PF12002 MgsA AAA+ ATPase C terminal CLQ99_RS18415 PF16193 AAA C-terminal domain CLQ99_RS18420 PF03548 Outer membrane lipoprotein carrier protein LolA CLQ99_RS18425 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CLQ99_RS18425 PF17854 FtsK alpha domain CLQ99_RS18425 PF09397 Ftsk gamma domain CLQ99_RS18425 PF01580 FtsK/SpoIIIE family CLQ99_RS18430 PF01037 Lrp/AsnC ligand binding domain CLQ99_RS18435 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ99_RS18440 PF00664 ABC transporter transmembrane region CLQ99_RS18440 PF00005 ABC transporter CLQ99_RS18445 PF00005 ABC transporter CLQ99_RS18445 PF00664 ABC transporter transmembrane region CLQ99_RS18450 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CLQ99_RS18455 PF01176 Translation initiation factor 1A / IF-1 CLQ99_RS18460 PF07724 AAA domain (Cdc48 subfamily) CLQ99_RS18460 PF00004 ATPase family associated with various cellular activities (AAA) CLQ99_RS18460 PF02861 Clp amino terminal domain, pathogenicity island component CLQ99_RS18460 PF10431 C-terminal, D2-small domain, of ClpB protein CLQ99_RS18460 PF17871 AAA lid domain CLQ99_RS18465 PF02617 ATP-dependent Clp protease adaptor protein ClpS CLQ99_RS18470 PF00313 'Cold-shock' DNA-binding domain CLQ99_RS18475 PF02687 FtsX-like permease family CLQ99_RS18475 PF00005 ABC transporter CLQ99_RS18475 PF12704 MacB-like periplasmic core domain CLQ99_RS18480 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ99_RS18485 PF11398 Protein of unknown function (DUF2813) CLQ99_RS18490 PF00230 Major intrinsic protein CLQ99_RS18495 PF03956 Lysine exporter LysO CLQ99_RS18500 PF03063 Prismane/CO dehydrogenase family CLQ99_RS18505 PF00175 Oxidoreductase NAD-binding domain CLQ99_RS18505 PF00111 2Fe-2S iron-sulfur cluster binding domain CLQ99_RS18505 PF00970 Oxidoreductase FAD-binding domain CLQ99_RS18520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ99_RS18520 PF00205 Thiamine pyrophosphate enzyme, central domain CLQ99_RS18520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLQ99_RS18525 PF01212 Beta-eliminating lyase CLQ99_RS18530 PF13460 NAD(P)H-binding CLQ99_RS18530 PF11066 Protein of unknown function (DUF2867) CLQ99_RS18535 PF01370 NAD dependent epimerase/dehydratase family CLQ99_RS18540 PF01510 N-acetylmuramoyl-L-alanine amidase CLQ99_RS18545 PF00563 EAL domain CLQ99_RS18545 PF00990 Diguanylate cyclase, GGDEF domain CLQ99_RS18545 PF00360 Phytochrome region CLQ99_RS18545 PF01590 GAF domain CLQ99_RS18555 PF12883 Protein of unknown function (DUF3828) CLQ99_RS18560 PF00005 ABC transporter CLQ99_RS18565 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ99_RS18570 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS18575 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS18580 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ99_RS18585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS18585 PF00989 PAS fold CLQ99_RS18585 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS18585 PF16736 Single Cache-like CLQ99_RS18590 PF00486 Transcriptional regulatory protein, C terminal CLQ99_RS18590 PF00072 Response regulator receiver domain CLQ99_RS18595 PF05958 tRNA (Uracil-5-)-methyltransferase CLQ99_RS18600 PF10767 Protein of unknown function (DUF2593) CLQ99_RS18605 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS18610 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS18615 PF00005 ABC transporter CLQ99_RS18615 PF08402 TOBE domain CLQ99_RS18620 PF13416 Bacterial extracellular solute-binding protein CLQ99_RS18625 PF10722 Putative bacterial sensory transduction regulator CLQ99_RS18630 PF08443 RimK-like ATP-grasp domain CLQ99_RS18630 PF18030 RimK PreATP-grasp domain CLQ99_RS18640 PF07214 Protein of unknown function (DUF1418) CLQ99_RS18645 PF00462 Glutaredoxin CLQ99_RS18650 PF11045 Putative inner membrane protein of Enterobacteriaceae CLQ99_RS18655 PF06826 Predicted Permease Membrane Region CLQ99_RS18655 PF02080 TrkA-C domain CLQ99_RS18660 PF04606 Ogr/Delta-like zinc finger CLQ99_RS18695 PF04984 Phage tail sheath protein subtilisin-like domain CLQ99_RS18695 PF17482 Phage tail sheath C-terminal domain CLQ99_RS18740 PF01609 Transposase DDE domain CLQ99_RS18740 PF05598 Transposase domain (DUF772) CLQ99_RS18825 PF06183 DinI-like family CLQ99_RS18835 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLQ99_RS18845 PF00589 Phage integrase family CLQ99_RS18845 PF02899 Phage integrase, N-terminal SAM-like domain CLQ99_RS18850 PF00440 Bacterial regulatory proteins, tetR family CLQ99_RS18855 PF07690 Major Facilitator Superfamily CLQ99_RS18865 PF07690 Major Facilitator Superfamily CLQ99_RS18875 PF01569 PAP2 superfamily CLQ99_RS18880 PF00455 DeoR C terminal sensor domain CLQ99_RS18880 PF08220 DeoR-like helix-turn-helix domain CLQ99_RS18885 PF07943 Penicillin-binding protein 5, C-terminal domain CLQ99_RS18885 PF00768 D-alanyl-D-alanine carboxypeptidase CLQ99_RS18890 PF00043 Glutathione S-transferase, C-terminal domain CLQ99_RS18890 PF13417 Glutathione S-transferase, N-terminal domain CLQ99_RS18895 PF07995 Glucose / Sorbosone dehydrogenase CLQ99_RS18900 PF10799 Biofilm formation protein (YliH/bssR) CLQ99_RS18905 PF01306 LacY proton/sugar symporter CLQ99_RS18910 PF00919 Uncharacterized protein family UPF0004 CLQ99_RS18910 PF18693 TRAM domain CLQ99_RS18910 PF04055 Radical SAM superfamily CLQ99_RS18920 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS18920 PF12911 N-terminal TM domain of oligopeptide transport permease C CLQ99_RS18925 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS18930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ99_RS18935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ99_RS18935 PF00005 ABC transporter CLQ99_RS18940 PF01112 Asparaginase CLQ99_RS18945 PF03453 MoeA N-terminal region (domain I and II) CLQ99_RS18945 PF03454 MoeA C-terminal region (domain IV) CLQ99_RS18945 PF00994 Probable molybdopterin binding domain CLQ99_RS18950 PF00899 ThiF family CLQ99_RS18955 PF04055 Radical SAM superfamily CLQ99_RS18960 PF01228 Glycine radical CLQ99_RS18960 PF02901 Pyruvate formate lyase-like CLQ99_RS18970 PF07350 Protein of unknown function (DUF1479) CLQ99_RS18975 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS18980 PF07690 Major Facilitator Superfamily CLQ99_RS18985 PF17137 Domain of unknown function (DUF5110) CLQ99_RS18985 PF13802 Galactose mutarotase-like CLQ99_RS18985 PF01055 Glycosyl hydrolases family 31 CLQ99_RS18985 PF16338 Domain of unknown function (DUF4968) CLQ99_RS18995 PF00005 ABC transporter CLQ99_RS18995 PF12848 ABC transporter CLQ99_RS19000 PF13350 Tyrosine phosphatase family CLQ99_RS19005 PF17969 L,D-transpeptidase C-terminal domain CLQ99_RS19005 PF03734 L,D-transpeptidase catalytic domain CLQ99_RS19010 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS19010 PF07702 UTRA domain CLQ99_RS19015 PF00232 Glycosyl hydrolase family 1 CLQ99_RS19020 PF03600 Citrate transporter CLQ99_RS19025 PF01325 Iron dependent repressor, N-terminal DNA binding domain CLQ99_RS19025 PF02742 Iron dependent repressor, metal binding and dimerisation domain CLQ99_RS19035 PF00884 Sulfatase CLQ99_RS19040 PF13505 Outer membrane protein beta-barrel domain CLQ99_RS19045 PF00892 EamA-like transporter family CLQ99_RS19050 PF00210 Ferritin-like domain CLQ99_RS19055 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ99_RS19060 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS19065 PF00005 ABC transporter CLQ99_RS19070 PF00924 Mechanosensitive ion channel CLQ99_RS19075 PF05971 RNA methyltransferase CLQ99_RS19080 PF01613 Flavin reductase like domain CLQ99_RS19090 PF01258 Prokaryotic dksA/traR C4-type zinc finger CLQ99_RS19095 PF07338 Protein of unknown function (DUF1471) CLQ99_RS19100 PF02885 Glycosyl transferase family, helical bundle domain CLQ99_RS19105 PF00270 DEAD/DEAH box helicase CLQ99_RS19105 PF13307 Helicase C-terminal domain CLQ99_RS19105 PF06733 DEAD_2 CLQ99_RS19110 PF00271 Helicase conserved C-terminal domain CLQ99_RS19110 PF00270 DEAD/DEAH box helicase CLQ99_RS19115 PF02779 Transketolase, pyrimidine binding domain CLQ99_RS19115 PF02780 Transketolase, C-terminal domain CLQ99_RS19120 PF00456 Transketolase, thiamine diphosphate binding domain CLQ99_RS19130 PF07690 Major Facilitator Superfamily CLQ99_RS19135 PF03466 LysR substrate binding domain CLQ99_RS19135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS19140 PF00440 Bacterial regulatory proteins, tetR family CLQ99_RS19140 PF09209 Tetracyclin repressor-like, C-terminal domain CLQ99_RS19145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ99_RS19150 PF00005 ABC transporter CLQ99_RS19165 PF11076 Putative inner membrane protein YbhQ CLQ99_RS19170 PF03372 Endonuclease/Exonuclease/phosphatase family CLQ99_RS19175 PF13091 PLD-like domain CLQ99_RS19180 PF03706 Lysylphosphatidylglycerol synthase TM region CLQ99_RS19190 PF01027 Inhibitor of apoptosis-promoting Bax1 CLQ99_RS19195 PF02391 MoaE protein CLQ99_RS19200 PF02597 ThiS family CLQ99_RS19205 PF01967 MoaC family CLQ99_RS19210 PF00994 Probable molybdopterin binding domain CLQ99_RS19215 PF06463 Molybdenum Cofactor Synthesis C CLQ99_RS19215 PF04055 Radical SAM superfamily CLQ99_RS19225 PF01933 Uncharacterised protein family UPF0052 CLQ99_RS19230 PF00884 Sulfatase CLQ99_RS19230 PF08019 Phosphoethanolamine transferase EptA/EptB CLQ99_RS19235 PF00486 Transcriptional regulatory protein, C terminal CLQ99_RS19235 PF00072 Response regulator receiver domain CLQ99_RS19240 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS19240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS19250 PF02151 UvrB/uvrC motif CLQ99_RS19250 PF12344 Ultra-violet resistance protein B CLQ99_RS19250 PF17757 UvrB interaction domain CLQ99_RS19250 PF00271 Helicase conserved C-terminal domain CLQ99_RS19250 PF04851 Type III restriction enzyme, res subunit CLQ99_RS19265 PF00005 ABC transporter CLQ99_RS19275 PF08241 Methyltransferase domain CLQ99_RS19280 PF00155 Aminotransferase class I and II CLQ99_RS19285 PF04055 Radical SAM superfamily CLQ99_RS19285 PF06968 Biotin and Thiamin Synthesis associated domain CLQ99_RS19290 PF00202 Aminotransferase class-III CLQ99_RS19295 PF01161 Phosphatidylethanolamine-binding protein CLQ99_RS19305 PF00324 Amino acid permease CLQ99_RS19310 PF00221 Aromatic amino acid lyase CLQ99_RS19315 PF17391 Urocanase N-terminal domain CLQ99_RS19315 PF17392 Urocanase C-terminal domain CLQ99_RS19315 PF01175 Urocanase Rossmann-like domain CLQ99_RS19320 PF07702 UTRA domain CLQ99_RS19320 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS19325 PF00491 Arginase family CLQ99_RS19330 PF01979 Amidohydrolase family CLQ99_RS19335 PF01095 Pectinesterase CLQ99_RS19365 PF13411 MerR HTH family regulatory protein CLQ99_RS19370 PF04940 Sensors of blue-light using FAD CLQ99_RS19370 PF00563 EAL domain CLQ99_RS19375 PF10798 Biofilm development protein YmgB/AriR CLQ99_RS19385 PF10798 Biofilm development protein YmgB/AriR CLQ99_RS19390 PF10282 Lactonase, 7-bladed beta-propeller CLQ99_RS19400 PF00005 ABC transporter CLQ99_RS19400 PF03459 TOBE domain CLQ99_RS19405 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS19415 PF10766 Multidrug efflux pump-associated protein AcrZ CLQ99_RS19420 PF03459 TOBE domain CLQ99_RS19420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS19425 PF00005 ABC transporter CLQ99_RS19430 PF16363 GDP-mannose 4,6 dehydratase CLQ99_RS19435 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CLQ99_RS19435 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CLQ99_RS19440 PF08544 GHMP kinases C terminal CLQ99_RS19440 PF00288 GHMP kinases N terminal domain CLQ99_RS19440 PF10509 Galactokinase galactose-binding signature CLQ99_RS19445 PF01263 Aldose 1-epimerase CLQ99_RS19450 PF00300 Histidine phosphatase superfamily (branch 1) CLQ99_RS19455 PF00793 DAHP synthetase I family CLQ99_RS19460 PF13985 YbgS-like protein CLQ99_RS19465 PF01545 Cation efflux family CLQ99_RS19470 PF04973 Nicotinamide mononucleotide transporter CLQ99_RS19475 PF02445 Quinolinate synthetase A protein CLQ99_RS19515 PF16331 TolA binding protein trimerisation CLQ99_RS19515 PF13174 Tetratricopeptide repeat CLQ99_RS19520 PF00691 OmpA family CLQ99_RS19525 PF04052 TolB amino-terminal domain CLQ99_RS19525 PF07676 WD40-like Beta Propeller Repeat CLQ99_RS19530 PF06519 TolA C-terminal CLQ99_RS19535 PF02472 Biopolymer transport protein ExbD/TolR CLQ99_RS19540 PF01618 MotA/TolQ/ExbB proton channel family CLQ99_RS19545 PF03061 Thioesterase superfamily CLQ99_RS19550 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) CLQ99_RS19555 PF08173 Membrane bound YbgT-like protein CLQ99_RS19560 PF02322 Cytochrome bd terminal oxidase subunit II CLQ99_RS19565 PF01654 Cytochrome bd terminal oxidase subunit I CLQ99_RS19575 PF02629 CoA binding domain CLQ99_RS19575 PF00549 CoA-ligase CLQ99_RS19580 PF00549 CoA-ligase CLQ99_RS19580 PF08442 ATP-grasp domain CLQ99_RS19590 PF02817 e3 binding domain CLQ99_RS19590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CLQ99_RS19590 PF00364 Biotin-requiring enzyme CLQ99_RS19595 PF00676 Dehydrogenase E1 component CLQ99_RS19595 PF16870 2-oxoglutarate dehydrogenase C-terminal CLQ99_RS19595 PF02779 Transketolase, pyrimidine binding domain CLQ99_RS19595 PF16078 2-oxoglutarate dehydrogenase N-terminus CLQ99_RS19600 PF13085 2Fe-2S iron-sulfur cluster binding domain CLQ99_RS19605 PF00890 FAD binding domain CLQ99_RS19605 PF02910 Fumarate reductase flavoprotein C-term CLQ99_RS19610 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CLQ99_RS19615 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CLQ99_RS19620 PF00285 Citrate synthase, C-terminal domain CLQ99_RS19625 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CLQ99_RS19625 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CLQ99_RS19625 PF06827 Zinc finger found in FPG and IleRS CLQ99_RS19630 PF01470 Pyroglutamyl peptidase CLQ99_RS19645 PF03746 LamB/YcsF family CLQ99_RS19650 PF02626 Carboxyltransferase domain, subdomain A and B CLQ99_RS19655 PF02682 Carboxyltransferase domain, subdomain C and D CLQ99_RS19660 PF01784 NIF3 (NGG1p interacting factor 3) CLQ99_RS19665 PF00854 POT family CLQ99_RS19670 PF00875 DNA photolyase CLQ99_RS19670 PF03441 FAD binding domain of DNA photolyase CLQ99_RS19675 PF10725 Protein of unknown function (DUF2517) CLQ99_RS19680 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) CLQ99_RS19685 PF03814 Potassium-transporting ATPase A subunit CLQ99_RS19695 PF02669 K+-transporting ATPase, c chain CLQ99_RS19700 PF13492 GAF domain CLQ99_RS19700 PF13493 Domain of unknown function (DUF4118) CLQ99_RS19700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS19700 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS19700 PF02702 Osmosensitive K+ channel His kinase sensor domain CLQ99_RS19705 PF00486 Transcriptional regulatory protein, C terminal CLQ99_RS19705 PF00072 Response regulator receiver domain CLQ99_RS19715 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CLQ99_RS19715 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CLQ99_RS19715 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CLQ99_RS19715 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CLQ99_RS19720 PF03925 SeqA protein C-terminal domain CLQ99_RS19720 PF17206 SeqA protein N-terminal domain CLQ99_RS19725 PF12697 Alpha/beta hydrolase family CLQ99_RS19730 PF01402 Ribbon-helix-helix protein, copG family CLQ99_RS19735 PF00258 Flavodoxin CLQ99_RS19740 PF01475 Ferric uptake regulator family CLQ99_RS19750 PF13982 YbfN-like lipoprotein CLQ99_RS19755 PF03573 outer membrane porin, OprD family CLQ99_RS19765 PF00749 tRNA synthetases class I (E and Q), catalytic domain CLQ99_RS19765 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CLQ99_RS19770 PF00367 phosphotransferase system, EIIB CLQ99_RS19770 PF02378 Phosphotransferase system, EIIC CLQ99_RS19770 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CLQ99_RS19775 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CLQ99_RS19780 PF01979 Amidohydrolase family CLQ99_RS19785 PF01047 MarR family CLQ99_RS19785 PF00480 ROK family CLQ99_RS19790 PF13344 Haloacid dehalogenase-like hydrolase CLQ99_RS19795 PF00733 Asparagine synthase CLQ99_RS19795 PF13537 Glutamine amidotransferase domain CLQ99_RS19840 PF01494 FAD binding domain CLQ99_RS19845 PF00919 Uncharacterized protein family UPF0004 CLQ99_RS19845 PF01938 TRAM domain CLQ99_RS19845 PF04055 Radical SAM superfamily CLQ99_RS19850 PF02562 PhoH-like protein CLQ99_RS19855 PF02130 Uncharacterized protein family UPF0054 CLQ99_RS19860 PF03471 Transporter associated domain CLQ99_RS19860 PF00571 CBS domain CLQ99_RS19865 PF00795 Carbon-nitrogen hydrolase CLQ99_RS19870 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ99_RS19875 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS19880 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS19885 PF00005 ABC transporter CLQ99_RS19890 PF08479 POTRA domain, ShlB-type CLQ99_RS19890 PF17287 POTRA domain CLQ99_RS19890 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB CLQ99_RS19895 PF14436 Bacterial EndoU nuclease CLQ99_RS19895 PF13332 Hemagglutinin repeat CLQ99_RS19895 PF05860 haemagglutination activity domain CLQ99_RS19895 PF04829 Pre-toxin domain with VENN motif CLQ99_RS19895 PF05594 Haemagluttinin repeat CLQ99_RS19900 PF07295 Zinc-ribbon containing domain CLQ99_RS19905 PF00133 tRNA synthetases class I (I, L, M and V) CLQ99_RS19905 PF08264 Anticodon-binding domain of tRNA CLQ99_RS19905 PF13603 Leucyl-tRNA synthetase, Domain 2 CLQ99_RS19910 PF04390 Lipopolysaccharide-assembly CLQ99_RS19915 PF06144 DNA polymerase III, delta subunit CLQ99_RS19915 PF14840 Processivity clamp loader gamma complex DNA pol III C-term CLQ99_RS19920 PF01467 Cytidylyltransferase-like CLQ99_RS19925 PF00300 Histidine phosphatase superfamily (branch 1) CLQ99_RS19935 PF02590 Predicted SPOUT methyltransferase CLQ99_RS19940 PF03717 Penicillin-binding Protein dimerisation domain CLQ99_RS19940 PF00905 Penicillin binding protein transpeptidase domain CLQ99_RS19945 PF01098 Cell cycle protein CLQ99_RS19950 PF03330 Lytic transglycolase CLQ99_RS19950 PF05036 Sporulation related domain CLQ99_RS19955 PF00768 D-alanyl-D-alanine carboxypeptidase CLQ99_RS19955 PF07943 Penicillin-binding protein 5, C-terminal domain CLQ99_RS19960 PF04359 Protein of unknown function (DUF493) CLQ99_RS19965 PF03099 Biotin/lipoate A/B protein ligase family CLQ99_RS19970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS19970 PF03466 LysR substrate binding domain CLQ99_RS19975 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CLQ99_RS19975 PF04055 Radical SAM superfamily CLQ99_RS19980 PF02416 mttA/Hcf106 family CLQ99_RS19985 PF00795 Carbon-nitrogen hydrolase CLQ99_RS19990 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CLQ99_RS19995 PF00313 'Cold-shock' DNA-binding domain CLQ99_RS20000 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CLQ99_RS20010 PF03606 C4-dicarboxylate anaerobic carrier CLQ99_RS20015 PF00445 Ribonuclease T2 family CLQ99_RS20020 PF14760 Rnk N-terminus CLQ99_RS20020 PF01272 Transcription elongation factor, GreA/GreB, C-term CLQ99_RS20025 PF00582 Universal stress protein family CLQ99_RS20030 PF13192 Thioredoxin domain CLQ99_RS20030 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ99_RS20035 PF00578 AhpC/TSA family CLQ99_RS20035 PF10417 C-terminal domain of 1-Cys peroxiredoxin CLQ99_RS20040 PF13098 Thioredoxin-like domain CLQ99_RS20045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS20045 PF03466 LysR substrate binding domain CLQ99_RS20050 PF11922 Domain of unknown function (DUF3440) CLQ99_RS20050 PF01507 Phosphoadenosine phosphosulfate reductase family CLQ99_RS20055 PF02195 ParB-like nuclease domain CLQ99_RS20060 PF00155 Aminotransferase class I and II CLQ99_RS20070 PF03079 ARD/ARD' family CLQ99_RS20075 PF01568 Molydopterin dinucleotide binding domain CLQ99_RS20075 PF00384 Molybdopterin oxidoreductase CLQ99_RS20085 PF00005 ABC transporter CLQ99_RS20090 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS20095 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS20105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLQ99_RS20105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLQ99_RS20110 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ99_RS20110 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ99_RS20115 PF00596 Class II Aldolase and Adducin N-terminal domain CLQ99_RS20120 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CLQ99_RS20130 PF07969 Amidohydrolase family CLQ99_RS20135 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS20140 PF00459 Inositol monophosphatase family CLQ99_RS20145 PF07690 Major Facilitator Superfamily CLQ99_RS20150 PF00328 Histidine phosphatase superfamily (branch 2) CLQ99_RS20155 PF01008 Initiation factor 2 subunit family CLQ99_RS20160 PF01636 Phosphotransferase enzyme family CLQ99_RS20175 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS20180 PF00005 ABC transporter CLQ99_RS20185 PF00465 Iron-containing alcohol dehydrogenase CLQ99_RS20205 PF04328 Selenoprotein, putative CLQ99_RS20210 PF13722 5TM C-terminal transporter carbon starvation CstA CLQ99_RS20210 PF02554 Carbon starvation protein CstA CLQ99_RS20215 PF03061 Thioesterase superfamily CLQ99_RS20225 PF00550 Phosphopantetheine attachment site CLQ99_RS20225 PF00857 Isochorismatase family CLQ99_RS20230 PF00501 AMP-binding enzyme CLQ99_RS20230 PF13193 AMP-binding enzyme C-terminal domain CLQ99_RS20235 PF00425 chorismate binding enzyme CLQ99_RS20240 PF01497 Periplasmic binding protein CLQ99_RS20245 PF05977 Transmembrane secretion effector CLQ99_RS20250 PF01032 FecCD transport family CLQ99_RS20255 PF01032 FecCD transport family CLQ99_RS20260 PF00005 ABC transporter CLQ99_RS20265 PF00501 AMP-binding enzyme CLQ99_RS20265 PF13193 AMP-binding enzyme C-terminal domain CLQ99_RS20265 PF00975 Thioesterase domain CLQ99_RS20265 PF00668 Condensation domain CLQ99_RS20265 PF00550 Phosphopantetheine attachment site CLQ99_RS20270 PF03621 MbtH-like protein CLQ99_RS20275 PF11806 Domain of unknown function (DUF3327) CLQ99_RS20275 PF00756 Putative esterase CLQ99_RS20285 PF07715 TonB-dependent Receptor Plug Domain CLQ99_RS20285 PF00593 TonB dependent receptor CLQ99_RS20290 PF01648 4'-phosphopantetheinyl transferase superfamily CLQ99_RS20290 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CLQ99_RS20295 PF02780 Transketolase, C-terminal domain CLQ99_RS20295 PF02779 Transketolase, pyrimidine binding domain CLQ99_RS20300 PF00456 Transketolase, thiamine diphosphate binding domain CLQ99_RS20310 PF00325 Bacterial regulatory proteins, crp family CLQ99_RS20310 PF04198 Putative sugar-binding domain CLQ99_RS20315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ99_RS20315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ99_RS20320 PF13407 Periplasmic binding protein domain CLQ99_RS20330 PF00005 ABC transporter CLQ99_RS20335 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS20355 PF03466 LysR substrate binding domain CLQ99_RS20355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS20360 PF00924 Mechanosensitive ion channel CLQ99_RS20370 PF02028 BCCT, betaine/carnitine/choline family transporter CLQ99_RS20375 PF13977 BetI-type transcriptional repressor, C-terminal CLQ99_RS20375 PF00440 Bacterial regulatory proteins, tetR family CLQ99_RS20380 PF00171 Aldehyde dehydrogenase family CLQ99_RS20385 PF00732 GMC oxidoreductase CLQ99_RS20385 PF05199 GMC oxidoreductase CLQ99_RS20395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ99_RS20400 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS20405 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS20405 PF12911 N-terminal TM domain of oligopeptide transport permease C CLQ99_RS20410 PF00005 ABC transporter CLQ99_RS20410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ99_RS20415 PF00005 ABC transporter CLQ99_RS20415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CLQ99_RS20420 PF00202 Aminotransferase class-III CLQ99_RS20425 PF00106 short chain dehydrogenase CLQ99_RS20430 PF00005 ABC transporter CLQ99_RS20435 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS20440 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS20445 PF01464 Transglycosylase SLT domain CLQ99_RS20445 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ99_RS20450 PF00155 Aminotransferase class I and II CLQ99_RS20450 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS20455 PF00155 Aminotransferase class I and II CLQ99_RS20460 PF00892 EamA-like transporter family CLQ99_RS20465 PF04107 Glutamate-cysteine ligase family 2(GCS2) CLQ99_RS20470 PF09992 Phosphodiester glycosidase CLQ99_RS20480 PF00873 AcrB/AcrD/AcrF family CLQ99_RS20485 PF13533 Biotin-lipoyl like CLQ99_RS20490 PF00690 Cation transporter/ATPase, N-terminus CLQ99_RS20490 PF00689 Cation transporting ATPase, C-terminus CLQ99_RS20500 PF06643 Protein of unknown function (DUF1158) CLQ99_RS20505 PF12833 Helix-turn-helix domain CLQ99_RS20510 PF12706 Beta-lactamase superfamily domain CLQ99_RS20515 PF00440 Bacterial regulatory proteins, tetR family CLQ99_RS20520 PF04237 YjbR CLQ99_RS20525 PF00881 Nitroreductase family CLQ99_RS20535 PF03830 PTS system sorbose subfamily IIB component CLQ99_RS20545 PF03613 PTS system mannose/fructose/sorbose family IID component CLQ99_RS20550 PF01380 SIS domain CLQ99_RS20555 PF01380 SIS domain CLQ99_RS20560 PF00874 PRD domain CLQ99_RS20560 PF03610 PTS system fructose IIA component CLQ99_RS20560 PF00158 Sigma-54 interaction domain CLQ99_RS20580 PF07690 Major Facilitator Superfamily CLQ99_RS20585 PF00924 Mechanosensitive ion channel CLQ99_RS20590 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS20605 PF16449 Fimbrillin MatB CLQ99_RS20610 PF18649 EcpB C-terminal domain CLQ99_RS20615 PF15976 CS1-pili formation C-terminal CLQ99_RS20615 PF16967 E-set like domain CLQ99_RS20630 PF00196 Bacterial regulatory proteins, luxR family CLQ99_RS20640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLQ99_RS20640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ99_RS20650 PF03825 Nucleoside H+ symporter CLQ99_RS20655 PF00324 Amino acid permease CLQ99_RS20660 PF00593 TonB dependent receptor CLQ99_RS20660 PF07715 TonB-dependent Receptor Plug Domain CLQ99_RS20670 PF00171 Aldehyde dehydrogenase family CLQ99_RS20675 PF01266 FAD dependent oxidoreductase CLQ99_RS20685 PF13520 Amino acid permease CLQ99_RS20695 PF00850 Histone deacetylase domain CLQ99_RS20705 PF00196 Bacterial regulatory proteins, luxR family CLQ99_RS20710 PF04055 Radical SAM superfamily CLQ99_RS20715 PF00884 Sulfatase CLQ99_RS20725 PF17409 MoaF C-terminal domain CLQ99_RS20725 PF10703 MoaF N-terminal domain CLQ99_RS20735 PF00248 Aldo/keto reductase family CLQ99_RS20740 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ99_RS20745 PF07687 Peptidase dimerisation domain CLQ99_RS20745 PF01546 Peptidase family M20/M25/M40 CLQ99_RS20765 PF01032 FecCD transport family CLQ99_RS20770 PF00005 ABC transporter CLQ99_RS20775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ99_RS20775 PF00529 HlyD membrane-fusion protein of T1SS CLQ99_RS20780 PF11742 Protein of unknown function (DUF3302) CLQ99_RS20790 PF00294 pfkB family carbohydrate kinase CLQ99_RS20795 PF11471 Maltoporin periplasmic N-terminal extension CLQ99_RS20795 PF02264 LamB porin CLQ99_RS20800 PF00367 phosphotransferase system, EIIB CLQ99_RS20800 PF02378 Phosphotransferase system, EIIC CLQ99_RS20805 PF08244 Glycosyl hydrolases family 32 C terminal CLQ99_RS20805 PF00251 Glycosyl hydrolases family 32 N-terminal domain CLQ99_RS20810 PF13407 Periplasmic binding protein domain CLQ99_RS20810 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS20820 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS20825 PF00005 ABC transporter CLQ99_RS20830 PF13407 Periplasmic binding protein domain CLQ99_RS20835 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS20840 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLQ99_RS20840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ99_RS20845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ99_RS20845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLQ99_RS20850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLQ99_RS20850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ99_RS20855 PF01261 Xylose isomerase-like TIM barrel CLQ99_RS20865 PF01336 OB-fold nucleic acid binding domain CLQ99_RS20865 PF00152 tRNA synthetases class II (D, K and N) CLQ99_RS20870 PF00854 POT family CLQ99_RS20875 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CLQ99_RS20875 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CLQ99_RS20875 PF01276 Orn/Lys/Arg decarboxylase, major domain CLQ99_RS20880 PF13520 Amino acid permease CLQ99_RS20885 PF18500 CadC C-terminal domain 1 CLQ99_RS20885 PF00486 Transcriptional regulatory protein, C terminal CLQ99_RS20895 PF03279 Bacterial lipid A biosynthesis acyltransferase CLQ99_RS20910 PF13953 PapC C-terminal domain CLQ99_RS20910 PF13954 PapC N-terminal domain CLQ99_RS20910 PF00577 Outer membrane usher protein CLQ99_RS20915 PF02753 Pili assembly chaperone PapD, C-terminal domain CLQ99_RS20915 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CLQ99_RS20920 PF16970 Type-1 fimbrial protein, A CLQ99_RS20935 PF00285 Citrate synthase, C-terminal domain CLQ99_RS20950 PF00576 HIUase/Transthyretin family CLQ99_RS20975 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CLQ99_RS20975 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CLQ99_RS20985 PF01406 tRNA synthetases class I (C) catalytic domain CLQ99_RS20985 PF09190 DALR domain CLQ99_RS20990 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CLQ99_RS20995 PF00149 Calcineurin-like phosphoesterase CLQ99_RS21005 PF00731 AIR carboxylase CLQ99_RS21010 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CLQ99_RS21010 PF02222 ATP-grasp domain CLQ99_RS21020 PF00267 Gram-negative porin CLQ99_RS21030 PF00005 ABC transporter CLQ99_RS21035 PF13472 GDSL-like Lipase/Acylhydrolase family CLQ99_RS21040 PF00106 short chain dehydrogenase CLQ99_RS21045 PF00085 Thioredoxin CLQ99_RS21055 PF03649 Uncharacterised protein family (UPF0014) CLQ99_RS21060 PF00005 ABC transporter CLQ99_RS21065 PF16200 C-terminal region of band_7 CLQ99_RS21065 PF01145 SPFH domain / Band 7 family CLQ99_RS21070 PF01957 NfeD-like C-terminal, partner-binding CLQ99_RS21075 PF13411 MerR HTH family regulatory protein CLQ99_RS21080 PF00403 Heavy-metal-associated domain CLQ99_RS21085 PF01963 TraB family CLQ99_RS21090 PF04073 Aminoacyl-tRNA editing domain CLQ99_RS21095 PF02872 5'-nucleotidase, C-terminal domain CLQ99_RS21095 PF00149 Calcineurin-like phosphoesterase CLQ99_RS21100 PF07690 Major Facilitator Superfamily CLQ99_RS21105 PF02254 TrkA-N domain CLQ99_RS21105 PF00999 Sodium/hydrogen exchanger family CLQ99_RS21110 PF00294 pfkB family carbohydrate kinase CLQ99_RS21115 PF00762 Ferrochelatase CLQ99_RS21120 PF05191 Adenylate kinase, active site lid CLQ99_RS21125 PF00183 Hsp90 protein CLQ99_RS21125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS21130 PF02132 RecR protein CLQ99_RS21130 PF13662 Toprim domain CLQ99_RS21135 PF02575 YbaB/EbfC DNA-binding family CLQ99_RS21140 PF12170 DNA polymerase III tau subunit V interacting with alpha CLQ99_RS21140 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CLQ99_RS21140 PF12169 DNA polymerase III subunits gamma and tau domain III CLQ99_RS21145 PF00156 Phosphoribosyl transferase domain CLQ99_RS21150 PF04304 Protein of unknown function (DUF454) CLQ99_RS21155 PF07445 Primosomal replication protein priC CLQ99_RS21160 PF10689 Protein of unknown function (DUF2496) CLQ99_RS21165 PF04754 Putative transposase, YhgA-like CLQ99_RS21170 PF12794 Mechanosensitive ion channel inner membrane domain 1 CLQ99_RS21170 PF00924 Mechanosensitive ion channel CLQ99_RS21170 PF12795 Mechanosensitive ion channel porin domain CLQ99_RS21190 PF00440 Bacterial regulatory proteins, tetR family CLQ99_RS21190 PF08361 MAATS-type transcriptional repressor, C-terminal region CLQ99_RS21195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ99_RS21195 PF00529 HlyD membrane-fusion protein of T1SS CLQ99_RS21200 PF00873 AcrB/AcrD/AcrF family CLQ99_RS21205 PF10757 Biofilm formation regulator YbaJ CLQ99_RS21210 PF05321 Haemolysin expression modulating protein CLQ99_RS21215 PF14602 Hexapeptide repeat of succinyl-transferase CLQ99_RS21215 PF12464 Maltose acetyltransferase CLQ99_RS21220 PF10777 Inner membrane protein YlaC CLQ99_RS21225 PF00155 Aminotransferase class I and II CLQ99_RS21225 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS21235 PF00444 Ribosomal protein L36 CLQ99_RS21240 PF01197 Ribosomal protein L31 CLQ99_RS21245 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS21250 PF02264 LamB porin CLQ99_RS21255 PF02378 Phosphotransferase system, EIIC CLQ99_RS21255 PF00367 phosphotransferase system, EIIB CLQ99_RS21260 PF02449 Beta-galactosidase CLQ99_RS21260 PF08532 Beta-galactosidase trimerisation domain CLQ99_RS21260 PF08533 Beta-galactosidase C-terminal domain CLQ99_RS21265 PF07745 Glycosyl hydrolase family 53 CLQ99_RS21270 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS21275 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS21280 PF13416 Bacterial extracellular solute-binding protein CLQ99_RS21285 PF00005 ABC transporter CLQ99_RS21285 PF17912 MalK OB fold domain CLQ99_RS21290 PF12792 CSS motif domain associated with EAL CLQ99_RS21290 PF00563 EAL domain CLQ99_RS21295 PF02583 Metal-sensitive transcriptional repressor CLQ99_RS21300 PF03824 High-affinity nickel-transport protein CLQ99_RS21335 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CLQ99_RS21340 PF09619 Type III secretion system lipoprotein chaperone (YscW) CLQ99_RS21350 PF00909 Ammonium Transporter Family CLQ99_RS21355 PF00543 Nitrogen regulatory protein P-II CLQ99_RS21360 PF00664 ABC transporter transmembrane region CLQ99_RS21360 PF00005 ABC transporter CLQ99_RS21365 PF00664 ABC transporter transmembrane region CLQ99_RS21365 PF00005 ABC transporter CLQ99_RS21370 PF13404 AsnC-type helix-turn-helix domain CLQ99_RS21370 PF01037 Lrp/AsnC ligand binding domain CLQ99_RS21375 PF00291 Pyridoxal-phosphate dependent enzyme CLQ99_RS21385 PF12793 Sugar transport-related sRNA regulator N-term CLQ99_RS21385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ99_RS21390 PF06508 Queuosine biosynthesis protein QueC CLQ99_RS21405 PF13145 PPIC-type PPIASE domain CLQ99_RS21410 PF00216 Bacterial DNA-binding protein CLQ99_RS21415 PF00004 ATPase family associated with various cellular activities (AAA) CLQ99_RS21415 PF02190 ATP-dependent protease La (LON) substrate-binding domain CLQ99_RS21415 PF05362 Lon protease (S16) C-terminal proteolytic domain CLQ99_RS21420 PF07724 AAA domain (Cdc48 subfamily) CLQ99_RS21420 PF10431 C-terminal, D2-small domain, of ClpB protein CLQ99_RS21420 PF06689 ClpX C4-type zinc finger CLQ99_RS21425 PF00574 Clp protease CLQ99_RS21430 PF05697 Bacterial trigger factor protein (TF) CLQ99_RS21430 PF05698 Bacterial trigger factor protein (TF) C-terminus CLQ99_RS21430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CLQ99_RS21445 PF01722 BolA-like protein CLQ99_RS21450 PF03923 Uncharacterized lipoprotein CLQ99_RS21450 PF08139 Prokaryotic membrane lipoprotein lipid attachment site CLQ99_RS21455 PF07690 Major Facilitator Superfamily CLQ99_RS21460 PF06481 COX Aromatic Rich Motif CLQ99_RS21460 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CLQ99_RS21465 PF00115 Cytochrome C and Quinol oxidase polypeptide I CLQ99_RS21470 PF00510 Cytochrome c oxidase subunit III CLQ99_RS21475 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CLQ99_RS21480 PF01040 UbiA prenyltransferase family CLQ99_RS21490 PF01614 Bacterial transcriptional regulator CLQ99_RS21490 PF09339 IclR helix-turn-helix domain CLQ99_RS21495 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CLQ99_RS21495 PF01488 Shikimate / quinate 5-dehydrogenase CLQ99_RS21495 PF08501 Shikimate dehydrogenase substrate binding domain CLQ99_RS21500 PF00890 FAD binding domain CLQ99_RS21510 PF00890 FAD binding domain CLQ99_RS21520 PF07690 Major Facilitator Superfamily CLQ99_RS21525 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLQ99_RS21525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ99_RS21530 PF07690 Major Facilitator Superfamily CLQ99_RS21535 PF04461 Protein of unknown function (DUF520) CLQ99_RS21540 PF02558 Ketopantoate reductase PanE/ApbA CLQ99_RS21540 PF08546 Ketopantoate reductase PanE/ApbA C terminal CLQ99_RS21545 PF01965 DJ-1/PfpI family CLQ99_RS21555 PF02926 THUMP domain CLQ99_RS21555 PF02568 Thiamine biosynthesis protein (ThiI) CLQ99_RS21560 PF02609 Exonuclease VII small subunit CLQ99_RS21565 PF00348 Polyprenyl synthetase CLQ99_RS21570 PF02780 Transketolase, C-terminal domain CLQ99_RS21570 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CLQ99_RS21570 PF02779 Transketolase, pyrimidine binding domain CLQ99_RS21575 PF00248 Aldo/keto reductase family CLQ99_RS21580 PF04608 Phosphatidylglycerophosphatase A CLQ99_RS21585 PF02769 AIR synthase related protein, C-terminal domain CLQ99_RS21585 PF00586 AIR synthase related protein, N-terminal domain CLQ99_RS21590 PF01029 NusB family CLQ99_RS21595 PF00885 6,7-dimethyl-8-ribityllumazine synthase CLQ99_RS21600 PF01872 RibD C-terminal domain CLQ99_RS21600 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CLQ99_RS21605 PF03477 ATP cone domain CLQ99_RS21610 PF11622 Protein of unknown function (DUF3251) CLQ99_RS21615 PF03502 Nucleoside-specific channel-forming protein, Tsx CLQ99_RS21630 PF02355 Protein export membrane protein CLQ99_RS21630 PF07549 SecD/SecF GG Motif CLQ99_RS21635 PF07549 SecD/SecF GG Motif CLQ99_RS21635 PF13721 SecD export protein N-terminal TM region CLQ99_RS21635 PF02355 Protein export membrane protein CLQ99_RS21640 PF02699 Preprotein translocase subunit CLQ99_RS21645 PF01702 Queuine tRNA-ribosyltransferase CLQ99_RS21650 PF02547 Queuosine biosynthesis protein CLQ99_RS21655 PF04336 Acyl carrier protein phosphodiesterase CLQ99_RS21660 PF10417 C-terminal domain of 1-Cys peroxiredoxin CLQ99_RS21660 PF00578 AhpC/TSA family CLQ99_RS21665 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ99_RS21675 PF03611 PTS system sugar-specific permease component CLQ99_RS21680 PF00294 pfkB family carbohydrate kinase CLQ99_RS21685 PF01116 Fructose-bisphosphate aldolase class-II CLQ99_RS21690 PF01979 Amidohydrolase family CLQ99_RS21700 PF00857 Isochorismatase family CLQ99_RS21705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS21705 PF03466 LysR substrate binding domain CLQ99_RS21710 PF02903 Alpha amylase, N-terminal ig-like domain CLQ99_RS21710 PF00128 Alpha amylase, catalytic domain CLQ99_RS21715 PF00324 Amino acid permease CLQ99_RS21720 PF05525 Branched-chain amino acid transport protein CLQ99_RS21725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS21725 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS21725 PF00989 PAS fold CLQ99_RS21725 PF11808 Phosphate regulon sensor protein PhoR CLQ99_RS21730 PF00486 Transcriptional regulatory protein, C terminal CLQ99_RS21730 PF00072 Response regulator receiver domain CLQ99_RS21735 PF00149 Calcineurin-like phosphoesterase CLQ99_RS21735 PF12320 Type 5 capsule protein repressor C-terminal domain CLQ99_RS21740 PF13476 AAA domain CLQ99_RS21745 PF00480 ROK family CLQ99_RS21750 PF04381 Putative exonuclease, RdgC CLQ99_RS21755 PF06865 Pyrimidine/purine nucleoside phosphorylase CLQ99_RS21760 PF07302 AroM protein CLQ99_RS21765 PF16362 YaiA protein CLQ99_RS21770 PF01202 Shikimate kinase CLQ99_RS21775 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) CLQ99_RS21780 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CLQ99_RS21785 PF03807 NADP oxidoreductase coenzyme F420-dependent CLQ99_RS21785 PF14748 Pyrroline-5-carboxylate reductase dimerisation CLQ99_RS21790 PF07769 psiF repeat CLQ99_RS21795 PF00245 Alkaline phosphatase CLQ99_RS21800 PF10796 Sigma-S stabilisation anti-adaptor protein CLQ99_RS21805 PF07690 Major Facilitator Superfamily CLQ99_RS21815 PF07478 D-ala D-ala ligase C-terminus CLQ99_RS21815 PF01820 D-ala D-ala ligase N-terminus CLQ99_RS21820 PF10953 Protein of unknown function (DUF2754) CLQ99_RS21825 PF10954 Protein of unknown function (DUF2755) CLQ99_RS21830 PF07759 Protein of unknown function (DUF1615) CLQ99_RS21835 PF05992 SbmA/BacA-like family CLQ99_RS21840 PF00857 Isochorismatase family CLQ99_RS21845 PF00144 Beta-lactamase CLQ99_RS21850 PF00490 Delta-aminolevulinic acid dehydratase CLQ99_RS21860 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CLQ99_RS21865 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS21870 PF00005 ABC transporter CLQ99_RS21875 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CLQ99_RS21880 PF02574 Homocysteine S-methyltransferase CLQ99_RS21885 PF00324 Amino acid permease CLQ99_RS21890 PF00324 Amino acid permease CLQ99_RS21895 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CLQ99_RS21900 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CLQ99_RS21905 PF13458 Periplasmic binding protein CLQ99_RS21910 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS21915 PF11862 Domain of unknown function (DUF3382) CLQ99_RS21915 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS21920 PF12399 Branched-chain amino acid ATP-binding cassette transporter CLQ99_RS21920 PF00005 ABC transporter CLQ99_RS21925 PF00005 ABC transporter CLQ99_RS21935 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ99_RS21940 PF00005 ABC transporter CLQ99_RS21945 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS21950 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS21965 PF15976 CS1-pili formation C-terminal CLQ99_RS21965 PF16967 E-set like domain CLQ99_RS21970 PF18649 EcpB C-terminal domain CLQ99_RS21975 PF16449 Fimbrillin MatB CLQ99_RS21980 PF00196 Bacterial regulatory proteins, luxR family CLQ99_RS21985 PF00005 ABC transporter CLQ99_RS21995 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS22000 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS22040 PF00877 NlpC/P60 family CLQ99_RS22045 PF00267 Gram-negative porin CLQ99_RS22050 PF01472 PUA domain CLQ99_RS22050 PF00696 Amino acid kinase family CLQ99_RS22055 PF00171 Aldehyde dehydrogenase family CLQ99_RS22065 PF13356 Arm DNA-binding domain CLQ99_RS22065 PF00589 Phage integrase family CLQ99_RS22065 PF14659 Phage integrase, N-terminal SAM-like domain CLQ99_RS22070 PF13614 AAA domain CLQ99_RS22085 PF04606 Ogr/Delta-like zinc finger CLQ99_RS22110 PF17345 Family of unknown function (DUF5375) CLQ99_RS22125 PF13191 AAA ATPase domain CLQ99_RS22125 PF00069 Protein kinase domain CLQ99_RS22130 PF00676 Dehydrogenase E1 component CLQ99_RS22135 PF02780 Transketolase, C-terminal domain CLQ99_RS22135 PF02779 Transketolase, pyrimidine binding domain CLQ99_RS22140 PF00364 Biotin-requiring enzyme CLQ99_RS22140 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CLQ99_RS22140 PF02817 e3 binding domain CLQ99_RS22145 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ99_RS22145 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLQ99_RS22160 PF01791 DeoC/LacD family aldolase CLQ99_RS22170 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ99_RS22170 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ99_RS22180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLQ99_RS22180 PF01842 ACT domain CLQ99_RS22180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLQ99_RS22185 PF03611 PTS system sugar-specific permease component CLQ99_RS22190 PF13417 Glutathione S-transferase, N-terminal domain CLQ99_RS22190 PF00043 Glutathione S-transferase, C-terminal domain CLQ99_RS22195 PF13847 Methyltransferase domain CLQ99_RS22200 PF09857 Putative toxin of bacterial toxin-antitoxin pair CLQ99_RS22210 PF08943 CsiD CLQ99_RS22215 PF01266 FAD dependent oxidoreductase CLQ99_RS22220 PF00171 Aldehyde dehydrogenase family CLQ99_RS22225 PF00202 Aminotransferase class-III CLQ99_RS22230 PF00324 Amino acid permease CLQ99_RS22235 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS22235 PF07729 FCD domain CLQ99_RS22240 PF07417 Sigma factor-binding transcriptional regulator Crl CLQ99_RS22245 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) CLQ99_RS22250 PF00156 Phosphoribosyl transferase domain CLQ99_RS22255 PF01546 Peptidase family M20/M25/M40 CLQ99_RS22255 PF07687 Peptidase dimerisation domain CLQ99_RS22260 PF13673 Acetyltransferase (GNAT) domain CLQ99_RS22265 PF11799 impB/mucB/samB family C-terminal domain CLQ99_RS22265 PF00817 impB/mucB/samB family CLQ99_RS22265 PF11798 IMS family HHH motif CLQ99_RS22270 PF03009 Glycerophosphoryl diester phosphodiesterase family CLQ99_RS22275 PF04400 (Na+)-NQR maturation NqrM CLQ99_RS22280 PF00111 2Fe-2S iron-sulfur cluster binding domain CLQ99_RS22280 PF00175 Oxidoreductase NAD-binding domain CLQ99_RS22280 PF00970 Oxidoreductase FAD-binding domain CLQ99_RS22285 PF02508 Rnf-Nqr subunit, membrane protein CLQ99_RS22290 PF02508 Rnf-Nqr subunit, membrane protein CLQ99_RS22295 PF04205 FMN-binding domain CLQ99_RS22300 PF03116 NQR2, RnfD, RnfE family CLQ99_RS22305 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CLQ99_RS22305 PF11973 NQRA C-terminal domain CLQ99_RS22315 PF03734 L,D-transpeptidase catalytic domain CLQ99_RS22320 PF13230 Glutamine amidotransferases class-II CLQ99_RS22325 PF13580 SIS domain CLQ99_RS22330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CLQ99_RS22330 PF09317 Domain of unknown function (DUF1974) CLQ99_RS22330 PF02770 Acyl-CoA dehydrogenase, middle domain CLQ99_RS22330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CLQ99_RS22335 PF00795 Carbon-nitrogen hydrolase CLQ99_RS22340 PF01810 LysE type translocator CLQ99_RS22345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS22345 PF03466 LysR substrate binding domain CLQ99_RS22355 PF00929 Exonuclease CLQ99_RS22360 PF00075 RNase H CLQ99_RS22365 PF08241 Methyltransferase domain CLQ99_RS22370 PF16123 Hydroxyacylglutathione hydrolase C-terminus CLQ99_RS22370 PF00753 Metallo-beta-lactamase superfamily CLQ99_RS22375 PF01476 LysM domain CLQ99_RS22375 PF01464 Transglycosylase SLT domain CLQ99_RS22380 PF08241 Methyltransferase domain CLQ99_RS22385 PF03372 Endonuclease/Exonuclease/phosphatase family CLQ99_RS22390 PF07690 Major Facilitator Superfamily CLQ99_RS22395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS22395 PF03466 LysR substrate binding domain CLQ99_RS22400 PF00248 Aldo/keto reductase family CLQ99_RS22440 PF09383 NIL domain CLQ99_RS22440 PF00005 ABC transporter CLQ99_RS22445 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS22450 PF03180 NLPA lipoprotein CLQ99_RS22455 PF16358 RcsF lipoprotein CLQ99_RS22460 PF01980 tRNA-methyltransferase O CLQ99_RS22460 PF18389 TrmO C-terminal domain CLQ99_RS22465 PF04073 Aminoacyl-tRNA editing domain CLQ99_RS22465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CLQ99_RS22465 PF03129 Anticodon binding domain CLQ99_RS22470 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CLQ99_RS22475 PF17185 NlpE C-terminal OB domain CLQ99_RS22475 PF04170 NlpE N-terminal domain CLQ99_RS22480 PF00472 RF-1 domain CLQ99_RS22485 PF07152 YaeQ protein CLQ99_RS22490 PF06786 Uncharacterised protein family (UPF0253) CLQ99_RS22495 PF07073 Modulator of Rho-dependent transcription termination (ROF) CLQ99_RS22500 PF09179 TilS substrate binding domain CLQ99_RS22500 PF11734 TilS substrate C-terminal domain CLQ99_RS22500 PF01171 PP-loop family CLQ99_RS22505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CLQ99_RS22510 PF01276 Orn/Lys/Arg decarboxylase, major domain CLQ99_RS22510 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CLQ99_RS22510 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CLQ99_RS22515 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CLQ99_RS22520 PF01336 OB-fold nucleic acid binding domain CLQ99_RS22520 PF07733 Bacterial DNA polymerase III alpha NTPase domain CLQ99_RS22520 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CLQ99_RS22520 PF02811 PHP domain CLQ99_RS22520 PF14579 Helix-hairpin-helix motif CLQ99_RS22525 PF01351 Ribonuclease HII CLQ99_RS22530 PF02684 Lipid-A-disaccharide synthetase CLQ99_RS22535 PF00132 Bacterial transferase hexapeptide (six repeats) CLQ99_RS22535 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CLQ99_RS22540 PF07977 FabA-like domain CLQ99_RS22545 PF00132 Bacterial transferase hexapeptide (six repeats) CLQ99_RS22545 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CLQ99_RS22550 PF03938 Outer membrane protein (OmpH-like) CLQ99_RS22555 PF07244 Surface antigen variable number repeat CLQ99_RS22555 PF01103 Surface antigen CLQ99_RS22560 PF17820 PDZ domain CLQ99_RS22560 PF02163 Peptidase family M50 CLQ99_RS22570 PF01255 Putative undecaprenyl diphosphate synthase CLQ99_RS22580 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CLQ99_RS22580 PF13288 DXP reductoisomerase C-terminal domain CLQ99_RS22580 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CLQ99_RS22585 PF01765 Ribosome recycling factor CLQ99_RS22590 PF00696 Amino acid kinase family CLQ99_RS22595 PF00889 Elongation factor TS CLQ99_RS22600 PF00318 Ribosomal protein S2 CLQ99_RS22605 PF00557 Metallopeptidase family M24 CLQ99_RS22610 PF01909 Nucleotidyltransferase domain CLQ99_RS22610 PF08335 GlnD PII-uridylyltransferase CLQ99_RS22610 PF01966 HD domain CLQ99_RS22610 PF01842 ACT domain CLQ99_RS22615 PF00132 Bacterial transferase hexapeptide (six repeats) CLQ99_RS22615 PF14602 Hexapeptide repeat of succinyl-transferase CLQ99_RS22615 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CLQ99_RS22620 PF11944 Protein of unknown function (DUF3461) CLQ99_RS22625 PF17853 GGDEF-like domain CLQ99_RS22625 PF13556 PucR C-terminal helix-turn-helix domain CLQ99_RS22625 PF05651 Putative sugar diacid recognition CLQ99_RS22630 PF00595 PDZ domain CLQ99_RS22635 PF13286 Phosphohydrolase-associated domain CLQ99_RS22635 PF01966 HD domain CLQ99_RS22640 PF01048 Phosphorylase superfamily CLQ99_RS22645 PF01497 Periplasmic binding protein CLQ99_RS22650 PF03458 UPF0126 domain CLQ99_RS22655 PF01521 Iron-sulphur cluster biosynthesis CLQ99_RS22660 PF00654 Voltage gated chloride channel CLQ99_RS22665 PF00202 Aminotransferase class-III CLQ99_RS22670 PF01032 FecCD transport family CLQ99_RS22675 PF01497 Periplasmic binding protein CLQ99_RS22680 PF00005 ABC transporter CLQ99_RS22690 PF14814 Bifunctional transglycosylase second domain CLQ99_RS22690 PF00912 Transglycosylase CLQ99_RS22690 PF00905 Penicillin binding protein transpeptidase domain CLQ99_RS22690 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal CLQ99_RS22695 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CLQ99_RS22700 PF16537 Type II secretion system protein B CLQ99_RS22705 PF18494 Pullulanase Ins domain CLQ99_RS22705 PF11852 Domain of unknown function (DUF3372) CLQ99_RS22705 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CLQ99_RS22705 PF03714 Bacterial pullanase-associated domain CLQ99_RS22705 PF17967 Pullulanase N2 domain CLQ99_RS22710 PF11356 Type II secretion system protein C CLQ99_RS22715 PF00263 Bacterial type II and III secretion system protein CLQ99_RS22715 PF03958 Bacterial type II/III secretion system short domain CLQ99_RS22720 PF00437 Type II/IV secretion system protein CLQ99_RS22725 PF00482 Type II secretion system (T2SS), protein F CLQ99_RS22730 PF08334 Type II secretion system (T2SS), protein G CLQ99_RS22730 PF07963 Prokaryotic N-terminal methylation motif CLQ99_RS22735 PF07963 Prokaryotic N-terminal methylation motif CLQ99_RS22740 PF07963 Prokaryotic N-terminal methylation motif CLQ99_RS22740 PF02501 Type II secretion system (T2SS), protein I CLQ99_RS22745 PF11612 Type II secretion system (T2SS), protein J CLQ99_RS22745 PF07963 Prokaryotic N-terminal methylation motif CLQ99_RS22750 PF03934 Type II secretion system (T2SS), protein K CLQ99_RS22755 PF05134 Type II secretion system (T2SS), protein L CLQ99_RS22755 PF12693 GspL periplasmic domain CLQ99_RS22760 PF04612 Type II secretion system (T2SS), protein M CLQ99_RS22765 PF01203 Type II secretion system (T2SS), protein N CLQ99_RS22770 PF06750 Bacterial Peptidase A24 N-terminal domain CLQ99_RS22770 PF01478 Type IV leader peptidase family CLQ99_RS22775 PF00271 Helicase conserved C-terminal domain CLQ99_RS22775 PF00270 DEAD/DEAH box helicase CLQ99_RS22775 PF08482 ATP-dependent helicase C-terminal CLQ99_RS22775 PF04408 Helicase associated domain (HA2) CLQ99_RS22780 PF02834 LigT like Phosphoesterase CLQ99_RS22785 PF03749 Sugar fermentation stimulation protein RE domain CLQ99_RS22785 PF17746 SfsA N-terminal OB domain CLQ99_RS22790 PF01258 Prokaryotic dksA/traR C4-type zinc finger CLQ99_RS22795 PF00749 tRNA synthetases class I (E and Q), catalytic domain CLQ99_RS22800 PF12627 Probable RNA and SrmB- binding site of polymerase A CLQ99_RS22800 PF12626 Polymerase A arginine-rich C-terminus CLQ99_RS22800 PF01743 Poly A polymerase head domain CLQ99_RS22805 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CLQ99_RS22810 PF02548 Ketopantoate hydroxymethyltransferase CLQ99_RS22815 PF02569 Pantoate-beta-alanine ligase CLQ99_RS22820 PF02261 Aspartate decarboxylase CLQ99_RS22825 PF01522 Polysaccharide deacetylase CLQ99_RS22830 PF03610 PTS system fructose IIA component CLQ99_RS22835 PF01061 ABC-2 type transporter CLQ99_RS22840 PF00005 ABC transporter CLQ99_RS22845 PF00484 Carbonic anhydrase CLQ99_RS22850 PF00156 Phosphoribosyl transferase domain CLQ99_RS22855 PF01011 PQQ enzyme repeat CLQ99_RS22860 PF07732 Multicopper oxidase CLQ99_RS22860 PF00394 Multicopper oxidase CLQ99_RS22860 PF07731 Multicopper oxidase CLQ99_RS22865 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) CLQ99_RS22890 PF17284 Spermidine synthase tetramerisation domain CLQ99_RS22895 PF02675 S-adenosylmethionine decarboxylase CLQ99_RS22900 PF06062 Uncharacterised protein family (UPF0231) CLQ99_RS22905 PF00330 Aconitase family (aconitate hydratase) CLQ99_RS22905 PF06434 Aconitate hydratase 2 N-terminus CLQ99_RS22905 PF11791 Aconitate B N-terminal domain CLQ99_RS22915 PF11737 Protein of unknown function (DUF3300) CLQ99_RS22930 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLQ99_RS22930 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ99_RS22935 PF00364 Biotin-requiring enzyme CLQ99_RS22935 PF02817 e3 binding domain CLQ99_RS22935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CLQ99_RS22940 PF00456 Transketolase, thiamine diphosphate binding domain CLQ99_RS22940 PF17831 Pyruvate dehydrogenase E1 component middle domain CLQ99_RS22945 PF07729 FCD domain CLQ99_RS22945 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS22950 PF00324 Amino acid permease CLQ99_RS22960 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain CLQ99_RS22960 PF04616 Glycosyl hydrolases family 43 CLQ99_RS22965 PF17113 Regulatory signalling modulator protein AmpE CLQ99_RS22970 PF01510 N-acetylmuramoyl-L-alanine amidase CLQ99_RS22975 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CLQ99_RS22975 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CLQ99_RS22980 PF07963 Prokaryotic N-terminal methylation motif CLQ99_RS22985 PF00437 Type II/IV secretion system protein CLQ99_RS22985 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CLQ99_RS22990 PF00482 Type II secretion system (T2SS), protein F CLQ99_RS22995 PF00478 IMP dehydrogenase / GMP reductase domain CLQ99_RS23000 PF01121 Dephospho-CoA kinase CLQ99_RS23005 PF07072 Cell division protein CLQ99_RS23010 PF03884 DNA gyrase inhibitor YacG CLQ99_RS23015 PF00293 NUDIX domain CLQ99_RS23020 PF01043 SecA preprotein cross-linking domain CLQ99_RS23020 PF07516 SecA Wing and Scaffold domain CLQ99_RS23020 PF02810 SEC-C motif CLQ99_RS23020 PF07517 SecA DEAD-like domain CLQ99_RS23025 PF06558 Secretion monitor precursor protein (SecM) CLQ99_RS23030 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CLQ99_RS23035 PF00091 Tubulin/FtsZ family, GTPase domain CLQ99_RS23035 PF12327 FtsZ family, C-terminal domain CLQ99_RS23040 PF02491 SHS2 domain inserted in FTSA CLQ99_RS23045 PF03799 Cell division protein FtsQ CLQ99_RS23045 PF08478 POTRA domain, FtsQ-type CLQ99_RS23050 PF01820 D-ala D-ala ligase N-terminus CLQ99_RS23050 PF07478 D-ala D-ala ligase C-terminus CLQ99_RS23055 PF02875 Mur ligase family, glutamate ligase domain CLQ99_RS23055 PF01225 Mur ligase family, catalytic domain CLQ99_RS23055 PF08245 Mur ligase middle domain CLQ99_RS23060 PF04101 Glycosyltransferase family 28 C-terminal domain CLQ99_RS23060 PF03033 Glycosyltransferase family 28 N-terminal domain CLQ99_RS23065 PF01098 Cell cycle protein CLQ99_RS23070 PF02875 Mur ligase family, glutamate ligase domain CLQ99_RS23070 PF08245 Mur ligase middle domain CLQ99_RS23075 PF00953 Glycosyl transferase family 4 CLQ99_RS23075 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CLQ99_RS23080 PF02875 Mur ligase family, glutamate ligase domain CLQ99_RS23080 PF01225 Mur ligase family, catalytic domain CLQ99_RS23080 PF08245 Mur ligase middle domain CLQ99_RS23085 PF02875 Mur ligase family, glutamate ligase domain CLQ99_RS23085 PF08245 Mur ligase middle domain CLQ99_RS23085 PF01225 Mur ligase family, catalytic domain CLQ99_RS23090 PF03717 Penicillin-binding Protein dimerisation domain CLQ99_RS23090 PF00905 Penicillin binding protein transpeptidase domain CLQ99_RS23095 PF04999 Cell division protein FtsL CLQ99_RS23100 PF01795 MraW methylase family CLQ99_RS23105 PF02381 MraZ protein, putative antitoxin-like CLQ99_RS23110 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CLQ99_RS23110 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS23115 PF10369 Small subunit of acetolactate synthase CLQ99_RS23120 PF00205 Thiamine pyrophosphate enzyme, central domain CLQ99_RS23120 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLQ99_RS23120 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ99_RS23130 PF03466 LysR substrate binding domain CLQ99_RS23130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS23140 PF00682 HMGL-like CLQ99_RS23140 PF08502 LeuA allosteric (dimerisation) domain CLQ99_RS23145 PF00180 Isocitrate/isopropylmalate dehydrogenase CLQ99_RS23150 PF00330 Aconitase family (aconitate hydratase) CLQ99_RS23155 PF00694 Aconitase C-terminal domain CLQ99_RS23160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CLQ99_RS23160 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ99_RS23165 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CLQ99_RS23165 PF08501 Shikimate dehydrogenase substrate binding domain CLQ99_RS23170 PF07690 Major Facilitator Superfamily CLQ99_RS23175 PF01487 Type I 3-dehydroquinase CLQ99_RS23180 PF03466 LysR substrate binding domain CLQ99_RS23180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS23185 PF07690 Major Facilitator Superfamily CLQ99_RS23190 PF07690 Major Facilitator Superfamily CLQ99_RS23200 PF12793 Sugar transport-related sRNA regulator N-term CLQ99_RS23200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CLQ99_RS23210 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS23215 PF00005 ABC transporter CLQ99_RS23220 PF09335 SNARE associated Golgi protein CLQ99_RS23225 PF12833 Helix-turn-helix domain CLQ99_RS23225 PF02311 AraC-like ligand binding domain CLQ99_RS23230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ99_RS23235 PF11762 L-arabinose isomerase C-terminal domain CLQ99_RS23235 PF02610 L-arabinose isomerase CLQ99_RS23240 PF00596 Class II Aldolase and Adducin N-terminal domain CLQ99_RS23245 PF03104 DNA polymerase family B, exonuclease domain CLQ99_RS23245 PF00136 DNA polymerase family B CLQ99_RS23250 PF18337 RapA N-terminal Tudor like domain CLQ99_RS23250 PF00271 Helicase conserved C-terminal domain CLQ99_RS23250 PF18339 RapA N-terminal Tudor like domain 1 CLQ99_RS23250 PF12137 RNA polymerase recycling family C-terminal CLQ99_RS23250 PF00176 SNF2 family N-terminal domain CLQ99_RS23255 PF00849 RNA pseudouridylate synthase CLQ99_RS23260 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CLQ99_RS23270 PF03390 2-hydroxycarboxylate transporter family CLQ99_RS23275 PF17203 Single cache domain 3 CLQ99_RS23275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS23280 PF12431 Transcriptional regulator CLQ99_RS23280 PF00072 Response regulator receiver domain CLQ99_RS23285 PF00226 DnaJ domain CLQ99_RS23285 PF05099 Tellurite resistance protein TerB CLQ99_RS23290 PF04453 LPS transport system D CLQ99_RS23290 PF03968 OstA-like protein CLQ99_RS23295 PF09312 SurA N-terminal domain CLQ99_RS23295 PF00639 PPIC-type PPIASE domain CLQ99_RS23300 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CLQ99_RS23305 PF00398 Ribosomal RNA adenine dimethylase CLQ99_RS23310 PF04379 ApaG domain CLQ99_RS23315 PF00149 Calcineurin-like phosphoesterase CLQ99_RS23325 PF00186 Dihydrofolate reductase CLQ99_RS23330 PF00999 Sodium/hydrogen exchanger family CLQ99_RS23330 PF02254 TrkA-N domain CLQ99_RS23335 PF02525 Flavodoxin-like fold CLQ99_RS23340 PF06004 Bacterial protein of unknown function (DUF903) CLQ99_RS23345 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CLQ99_RS23345 PF02142 MGS-like domain CLQ99_RS23345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CLQ99_RS23350 PF00117 Glutamine amidotransferase class-I CLQ99_RS23350 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CLQ99_RS23355 PF05173 Dihydrodipicolinate reductase, C-terminus CLQ99_RS23355 PF01113 Dihydrodipicolinate reductase, N-terminus CLQ99_RS23360 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CLQ99_RS23365 PF04223 Citrate lyase, alpha subunit (CitF) CLQ99_RS23370 PF03328 HpcH/HpaI aldolase/citrate lyase family CLQ99_RS23375 PF06857 Malonate decarboxylase delta subunit (MdcD) CLQ99_RS23380 PF00583 Acetyltransferase (GNAT) family CLQ99_RS23380 PF08218 Citrate lyase ligase C-terminal domain CLQ99_RS23385 PF03390 2-hydroxycarboxylate transporter family CLQ99_RS23390 PF04277 Oxaloacetate decarboxylase, gamma chain CLQ99_RS23395 PF00364 Biotin-requiring enzyme CLQ99_RS23395 PF00682 HMGL-like CLQ99_RS23395 PF02436 Conserved carboxylase domain CLQ99_RS23400 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CLQ99_RS23405 PF17203 Single cache domain 3 CLQ99_RS23405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS23410 PF12431 Transcriptional regulator CLQ99_RS23410 PF00072 Response regulator receiver domain CLQ99_RS23415 PF02272 DHHA1 domain CLQ99_RS23415 PF01411 tRNA synthetases class II (A) CLQ99_RS23415 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CLQ99_RS23420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS23420 PF03466 LysR substrate binding domain CLQ99_RS23430 PF01156 Inosine-uridine preferring nucleoside hydrolase CLQ99_RS23435 PF02401 LytB protein CLQ99_RS23440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CLQ99_RS23445 PF01252 Signal peptidase (SPase) II CLQ99_RS23450 PF08264 Anticodon-binding domain of tRNA CLQ99_RS23450 PF00133 tRNA synthetases class I (I, L, M and V) CLQ99_RS23450 PF06827 Zinc finger found in FPG and IleRS CLQ99_RS23455 PF01687 Riboflavin kinase CLQ99_RS23455 PF06574 FAD synthetase CLQ99_RS23465 PF01649 Ribosomal protein S20 CLQ99_RS23470 PF03466 LysR substrate binding domain CLQ99_RS23470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS23475 PF06965 Na+/H+ antiporter 1 CLQ99_RS23480 PF00684 DnaJ central domain CLQ99_RS23480 PF01556 DnaJ C terminal domain CLQ99_RS23480 PF00226 DnaJ domain CLQ99_RS23485 PF00012 Hsp70 protein CLQ99_RS23490 PF10807 Protein of unknown function (DUF2541) CLQ99_RS23495 PF13099 Domain of unknown function (DUF3944) CLQ99_RS23495 PF03981 Ubiquinol-cytochrome C chaperone CLQ99_RS23500 PF01184 GPR1/FUN34/yaaH family CLQ99_RS23505 PF07690 Major Facilitator Superfamily CLQ99_RS23510 PF00994 Probable molybdopterin binding domain CLQ99_RS23515 PF00923 Transaldolase/Fructose-6-phosphate aldolase CLQ99_RS23520 PF01235 Sodium:alanine symporter family CLQ99_RS23525 PF03883 Peroxide stress protein YaaA CLQ99_RS23535 PF14821 Threonine synthase N terminus CLQ99_RS23535 PF00291 Pyridoxal-phosphate dependent enzyme CLQ99_RS23540 PF00288 GHMP kinases N terminal domain CLQ99_RS23540 PF08544 GHMP kinases C terminal CLQ99_RS23545 PF00696 Amino acid kinase family CLQ99_RS23545 PF03447 Homoserine dehydrogenase, NAD binding domain CLQ99_RS23545 PF01842 ACT domain CLQ99_RS23545 PF13840 ACT domain CLQ99_RS23545 PF00742 Homoserine dehydrogenase CLQ99_RS23550 PF08254 Threonine leader peptide CLQ99_RS23555 PF00588 SpoU rRNA Methylase family CLQ99_RS23565 PF00072 Response regulator receiver domain CLQ99_RS23565 PF00486 Transcriptional regulatory protein, C terminal CLQ99_RS23570 PF06123 Inner membrane protein CreD CLQ99_RS23575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS23575 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS23575 PF00672 HAMP domain CLQ99_RS23580 PF00072 Response regulator receiver domain CLQ99_RS23580 PF00486 Transcriptional regulatory protein, C terminal CLQ99_RS23585 PF05981 CreA protein CLQ99_RS23590 PF06445 GyrI-like small molecule binding domain CLQ99_RS23590 PF12833 Helix-turn-helix domain CLQ99_RS23595 PF00300 Histidine phosphatase superfamily (branch 1) CLQ99_RS23600 PF01931 Protein of unknown function DUF84 CLQ99_RS23605 PF01371 Trp repressor protein CLQ99_RS23610 PF01464 Transglycosylase SLT domain CLQ99_RS23610 PF14718 Soluble lytic murein transglycosylase L domain CLQ99_RS23615 PF12848 ABC transporter CLQ99_RS23615 PF00005 ABC transporter CLQ99_RS23620 PF01381 Helix-turn-helix CLQ99_RS23620 PF13521 AAA domain CLQ99_RS23625 PF18073 Rubredoxin metal binding domain CLQ99_RS23630 PF18429 Domain of unknown function (DUF5609) CLQ99_RS23640 PF10144 Bacterial virulence factor haemolysin CLQ99_RS23645 PF03099 Biotin/lipoate A/B protein ligase family CLQ99_RS23645 PF10437 Bacterial lipoate protein ligase C-terminus CLQ99_RS23650 PF01048 Phosphorylase superfamily CLQ99_RS23655 PF01676 Metalloenzyme superfamily CLQ99_RS23660 PF02885 Glycosyl transferase family, helical bundle domain CLQ99_RS23660 PF00591 Glycosyl transferase family, a/b domain CLQ99_RS23660 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CLQ99_RS23665 PF01791 DeoC/LacD family aldolase CLQ99_RS23670 PF01773 Na+ dependent nucleoside transporter N-terminus CLQ99_RS23670 PF07662 Na+ dependent nucleoside transporter C-terminus CLQ99_RS23670 PF07670 Nucleoside recognition CLQ99_RS23675 PF01026 TatD related DNase CLQ99_RS23680 PF01734 Patatin-like phospholipase CLQ99_RS23685 PF07043 Protein of unknown function (DUF1328) CLQ99_RS23690 PF04972 BON domain CLQ99_RS23695 PF00009 Elongation factor Tu GTP binding domain CLQ99_RS23695 PF16658 Class II release factor RF3, C-terminal domain CLQ99_RS23695 PF03144 Elongation factor Tu domain 2 CLQ99_RS23700 PF13419 Haloacid dehalogenase-like hydrolase CLQ99_RS23705 PF00583 Acetyltransferase (GNAT) family CLQ99_RS23710 PF03603 DNA polymerase III psi subunit CLQ99_RS23715 PF05175 Methyltransferase small domain CLQ99_RS23715 PF08468 Methyltransferase small domain N-terminal CLQ99_RS23735 PF07256 Protein of unknown function (DUF1435) CLQ99_RS23740 PF00990 Diguanylate cyclase, GGDEF domain CLQ99_RS23745 PF06276 Ferric iron reductase FhuF-like transporter CLQ99_RS23745 PF11575 FhuF 2Fe-2S C-terminal domain CLQ99_RS23750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ99_RS23750 PF02378 Phosphotransferase system, EIIC CLQ99_RS23755 PF04073 Aminoacyl-tRNA editing domain CLQ99_RS23760 PF00196 Bacterial regulatory proteins, luxR family CLQ99_RS23765 PF00196 Bacterial regulatory proteins, luxR family CLQ99_RS23775 PF01494 FAD binding domain CLQ99_RS23785 PF06738 Putative threonine/serine exporter CLQ99_RS23790 PF12821 Threonine/Serine exporter, ThrE CLQ99_RS23795 PF17948 DnaT DNA-binding domain CLQ99_RS23800 PF01695 IstB-like ATP binding protein CLQ99_RS23805 PF10696 Protein of unknown function (DUF2501) CLQ99_RS23810 PF00884 Sulfatase CLQ99_RS23815 PF04754 Putative transposase, YhgA-like CLQ99_RS23820 PF01380 SIS domain CLQ99_RS23825 PF01380 SIS domain CLQ99_RS23830 PF03613 PTS system mannose/fructose/sorbose family IID component CLQ99_RS23835 PF03609 PTS system sorbose-specific iic component CLQ99_RS23840 PF03830 PTS system sorbose subfamily IIB component CLQ99_RS23845 PF03610 PTS system fructose IIA component CLQ99_RS23845 PF03830 PTS system sorbose subfamily IIB component CLQ99_RS23850 PF00874 PRD domain CLQ99_RS23850 PF03610 PTS system fructose IIA component CLQ99_RS23850 PF00158 Sigma-54 interaction domain CLQ99_RS23855 PF08125 Mannitol dehydrogenase C-terminal domain CLQ99_RS23855 PF01232 Mannitol dehydrogenase Rossmann domain CLQ99_RS23860 PF08240 Alcohol dehydrogenase GroES-like domain CLQ99_RS23860 PF00107 Zinc-binding dehydrogenase CLQ99_RS23865 PF07729 FCD domain CLQ99_RS23865 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS23870 PF07690 Major Facilitator Superfamily CLQ99_RS23875 PF00583 Acetyltransferase (GNAT) family CLQ99_RS23875 PF00814 Glycoprotease family CLQ99_RS23880 PF00583 Acetyltransferase (GNAT) family CLQ99_RS23885 PF01380 SIS domain CLQ99_RS23885 PF01418 Helix-turn-helix domain, rpiR family CLQ99_RS23890 PF01081 KDPG and KHG aldolase CLQ99_RS23895 PF05035 2-keto-3-deoxy-galactonokinase CLQ99_RS23910 PF07969 Amidohydrolase family CLQ99_RS23925 PF02615 Malate/L-lactate dehydrogenase CLQ99_RS23940 PF01047 MarR family CLQ99_RS23950 PF01557 Fumarylacetoacetate (FAA) hydrolase family CLQ99_RS23955 PF01557 Fumarylacetoacetate (FAA) hydrolase family CLQ99_RS23960 PF00171 Aldehyde dehydrogenase family CLQ99_RS23965 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CLQ99_RS23970 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase CLQ99_RS23975 PF01557 Fumarylacetoacetate (FAA) hydrolase family CLQ99_RS23980 PF03328 HpcH/HpaI aldolase/citrate lyase family CLQ99_RS23985 PF07690 Major Facilitator Superfamily CLQ99_RS23990 PF12833 Helix-turn-helix domain CLQ99_RS23995 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CLQ99_RS23995 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CLQ99_RS24000 PF01613 Flavin reductase like domain CLQ99_RS24015 PF13722 5TM C-terminal transporter carbon starvation CstA CLQ99_RS24015 PF02554 Carbon starvation protein CstA CLQ99_RS24020 PF04328 Selenoprotein, putative CLQ99_RS24025 PF07683 Cobalamin synthesis protein cobW C-terminal domain CLQ99_RS24025 PF02492 CobW/HypB/UreG, nucleotide-binding domain CLQ99_RS24035 PF00171 Aldehyde dehydrogenase family CLQ99_RS24040 PF04754 Putative transposase, YhgA-like CLQ99_RS24045 PF02311 AraC-like ligand binding domain CLQ99_RS24045 PF12833 Helix-turn-helix domain CLQ99_RS24055 PF04286 Protein of unknown function (DUF445) CLQ99_RS24060 PF07690 Major Facilitator Superfamily CLQ99_RS24070 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CLQ99_RS24075 PF01869 BadF/BadG/BcrA/BcrD ATPase family CLQ99_RS24080 PF11823 Protein of unknown function (DUF3343) CLQ99_RS24090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ99_RS24090 PF00529 HlyD membrane-fusion protein of T1SS CLQ99_RS24100 PF06568 Domain of unknown function (DUF1127) CLQ99_RS24105 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS24105 PF00155 Aminotransferase class I and II CLQ99_RS24110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CLQ99_RS24115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS24115 PF03466 LysR substrate binding domain CLQ99_RS24120 PF02525 Flavodoxin-like fold CLQ99_RS24125 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS24130 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS24135 PF00005 ABC transporter CLQ99_RS24140 PF13407 Periplasmic binding protein domain CLQ99_RS24145 PF00579 tRNA synthetases class I (W and Y) CLQ99_RS24150 PF13533 Biotin-lipoyl like CLQ99_RS24155 PF00005 ABC transporter CLQ99_RS24195 PF08007 Cupin superfamily protein CLQ99_RS24210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS24210 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS24210 PF00672 HAMP domain CLQ99_RS24215 PF00486 Transcriptional regulatory protein, C terminal CLQ99_RS24215 PF00072 Response regulator receiver domain CLQ99_RS24225 PF02321 Outer membrane efflux protein CLQ99_RS24230 PF11604 Copper binding periplasmic protein CusF CLQ99_RS24235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ99_RS24235 PF00529 HlyD membrane-fusion protein of T1SS CLQ99_RS24240 PF00873 AcrB/AcrD/AcrF family CLQ99_RS24250 PF08212 Lipocalin-like domain CLQ99_RS24255 PF13411 MerR HTH family regulatory protein CLQ99_RS24265 PF00106 short chain dehydrogenase CLQ99_RS24300 PF08349 Protein of unknown function (DUF1722) CLQ99_RS24305 PF02264 LamB porin CLQ99_RS24320 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CLQ99_RS24320 PF04616 Glycosyl hydrolases family 43 CLQ99_RS24380 PF17345 Family of unknown function (DUF5375) CLQ99_RS24410 PF04606 Ogr/Delta-like zinc finger CLQ99_RS24425 PF05598 Transposase domain (DUF772) CLQ99_RS24425 PF01609 Transposase DDE domain CLQ99_RS24435 PF13356 Arm DNA-binding domain CLQ99_RS24435 PF00589 Phage integrase family CLQ99_RS24450 PF00484 Carbonic anhydrase CLQ99_RS24455 PF00916 Sulfate permease family CLQ99_RS24455 PF01740 STAS domain CLQ99_RS24460 PF08240 Alcohol dehydrogenase GroES-like domain CLQ99_RS24460 PF00107 Zinc-binding dehydrogenase CLQ99_RS24465 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS24470 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS24475 PF00149 Calcineurin-like phosphoesterase CLQ99_RS24480 PF17912 MalK OB fold domain CLQ99_RS24480 PF00005 ABC transporter CLQ99_RS24485 PF13416 Bacterial extracellular solute-binding protein CLQ99_RS24490 PF01261 Xylose isomerase-like TIM barrel CLQ99_RS24495 PF01261 Xylose isomerase-like TIM barrel CLQ99_RS24500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CLQ99_RS24500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CLQ99_RS24505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLQ99_RS24505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ99_RS24505 PF00205 Thiamine pyrophosphate enzyme, central domain CLQ99_RS24510 PF00294 pfkB family carbohydrate kinase CLQ99_RS24515 PF01380 SIS domain CLQ99_RS24515 PF01418 Helix-turn-helix domain, rpiR family CLQ99_RS24515 PF02685 Glucokinase CLQ99_RS24545 PF04962 KduI/IolB family CLQ99_RS24550 PF00171 Aldehyde dehydrogenase family CLQ99_RS24560 PF05872 Bacterial protein of unknown function (DUF853) CLQ99_RS24565 PF03739 Lipopolysaccharide export system permease LptF/LptG CLQ99_RS24570 PF03739 Lipopolysaccharide export system permease LptF/LptG CLQ99_RS24580 PF02789 Cytosol aminopeptidase family, N-terminal domain CLQ99_RS24580 PF00883 Cytosol aminopeptidase family, catalytic domain CLQ99_RS24585 PF04364 DNA polymerase III chi subunit, HolC CLQ99_RS24590 PF10458 Valyl tRNA synthetase tRNA binding arm CLQ99_RS24590 PF00133 tRNA synthetases class I (I, L, M and V) CLQ99_RS24590 PF08264 Anticodon-binding domain of tRNA CLQ99_RS24595 PF00583 Acetyltransferase (GNAT) family CLQ99_RS24600 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CLQ99_RS24605 PF06877 Regulator of ribonuclease activity B CLQ99_RS24610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLQ99_RS24610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLQ99_RS24615 PF07702 UTRA domain CLQ99_RS24615 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS24620 PF03606 C4-dicarboxylate anaerobic carrier CLQ99_RS24625 PF01979 Amidohydrolase family CLQ99_RS24630 PF00294 pfkB family carbohydrate kinase CLQ99_RS24635 PF01380 SIS domain CLQ99_RS24640 PF04074 YhcH/YjgK/YiaL CLQ99_RS24655 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CLQ99_RS24655 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CLQ99_RS24660 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CLQ99_RS24660 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CLQ99_RS24665 PF01042 Endoribonuclease L-PSP CLQ99_RS24670 PF00690 Cation transporter/ATPase, N-terminus CLQ99_RS24670 PF00689 Cation transporting ATPase, C-terminus CLQ99_RS24680 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS24685 PF00367 phosphotransferase system, EIIB CLQ99_RS24685 PF02378 Phosphotransferase system, EIIC CLQ99_RS24690 PF11941 Domain of unknown function (DUF3459) CLQ99_RS24690 PF00128 Alpha amylase, catalytic domain CLQ99_RS24695 PF02378 Phosphotransferase system, EIIC CLQ99_RS24700 PF11975 Family 4 glycosyl hydrolase C-terminal domain CLQ99_RS24700 PF02056 Family 4 glycosyl hydrolase CLQ99_RS24705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ99_RS24715 PF03477 ATP cone domain CLQ99_RS24715 PF13597 Anaerobic ribonucleoside-triphosphate reductase CLQ99_RS24725 PF05016 ParE toxin of type II toxin-antitoxin system, parDE CLQ99_RS24730 PF04221 RelB antitoxin CLQ99_RS24735 PF05043 Mga helix-turn-helix domain CLQ99_RS24735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ99_RS24735 PF00874 PRD domain CLQ99_RS24735 PF08279 HTH domain CLQ99_RS24740 PF10282 Lactonase, 7-bladed beta-propeller CLQ99_RS24745 PF07071 KDGP aldolase CLQ99_RS24750 PF03841 L-seryl-tRNA selenium transferase CLQ99_RS24755 PF01979 Amidohydrolase family CLQ99_RS24785 PF07361 Cytochrome b562 CLQ99_RS24790 PF01523 Putative modulator of DNA gyrase CLQ99_RS24795 PF04751 Protein of unknown function (DUF615) CLQ99_RS24810 PF08245 Mur ligase middle domain CLQ99_RS24810 PF02875 Mur ligase family, glutamate ligase domain CLQ99_RS24810 PF01225 Mur ligase family, catalytic domain CLQ99_RS24815 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CLQ99_RS24820 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS24825 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS24830 PF00005 ABC transporter CLQ99_RS24835 PF13407 Periplasmic binding protein domain CLQ99_RS24840 PF00719 Inorganic pyrophosphatase CLQ99_RS24855 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CLQ99_RS24860 PF04357 TamB, inner membrane protein subunit of TAM complex CLQ99_RS24865 PF01103 Surface antigen CLQ99_RS24865 PF17243 POTRA domain TamA domain 1 CLQ99_RS24865 PF07244 Surface antigen variable number repeat CLQ99_RS24870 PF01625 Peptide methionine sulfoxide reductase CLQ99_RS24875 PF01595 Cyclin M transmembrane N-terminal domain CLQ99_RS24875 PF03471 Transporter associated domain CLQ99_RS24875 PF00571 CBS domain CLQ99_RS24885 PF06526 Protein of unknown function (DUF1107) CLQ99_RS24890 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) CLQ99_RS24895 PF00459 Inositol monophosphatase family CLQ99_RS24900 PF02872 5'-nucleotidase, C-terminal domain CLQ99_RS24900 PF00149 Calcineurin-like phosphoesterase CLQ99_RS24905 PF01638 HxlR-like helix-turn-helix CLQ99_RS24910 PF05368 NmrA-like family CLQ99_RS24915 PF12833 Helix-turn-helix domain CLQ99_RS24920 PF00892 EamA-like transporter family CLQ99_RS24925 PF04405 Domain of Unknown function (DUF542) CLQ99_RS24925 PF01814 Hemerythrin HHE cation binding domain CLQ99_RS24930 PF00324 Amino acid permease CLQ99_RS24935 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CLQ99_RS24935 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CLQ99_RS24940 PF08525 Opacity-associated protein A N-terminal motif CLQ99_RS24940 PF04225 Opacity-associated protein A LysM-like domain CLQ99_RS24945 PF01281 Ribosomal protein L9, N-terminal domain CLQ99_RS24945 PF03948 Ribosomal protein L9, C-terminal domain CLQ99_RS24950 PF01084 Ribosomal protein S18 CLQ99_RS24955 PF00436 Single-strand binding protein family CLQ99_RS24960 PF01250 Ribosomal protein S6 CLQ99_RS24965 PF07338 Protein of unknown function (DUF1471) CLQ99_RS24970 PF07690 Major Facilitator Superfamily CLQ99_RS24975 PF00596 Class II Aldolase and Adducin N-terminal domain CLQ99_RS24980 PF01261 Xylose isomerase-like TIM barrel CLQ99_RS24985 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CLQ99_RS24990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ99_RS24995 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ99_RS25000 PF03611 PTS system sugar-specific permease component CLQ99_RS25010 PF00455 DeoR C terminal sensor domain CLQ99_RS25010 PF08220 DeoR-like helix-turn-helix domain CLQ99_RS25015 PF00326 Prolyl oligopeptidase family CLQ99_RS25020 PF07338 Protein of unknown function (DUF1471) CLQ99_RS25025 PF07338 Protein of unknown function (DUF1471) CLQ99_RS25030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CLQ99_RS25030 PF02770 Acyl-CoA dehydrogenase, middle domain CLQ99_RS25030 PF18158 Adaptive response protein AidB N-terminal domain CLQ99_RS25035 PF00588 SpoU rRNA Methylase family CLQ99_RS25035 PF08032 RNA 2'-O ribose methyltransferase substrate binding CLQ99_RS25040 PF00773 RNB domain CLQ99_RS25040 PF08206 Ribonuclease B OB domain CLQ99_RS25040 PF08461 Ribonuclease R winged-helix domain CLQ99_RS25040 PF17876 Cold shock domain CLQ99_RS25040 PF00575 S1 RNA binding domain CLQ99_RS25045 PF02082 Transcriptional regulator CLQ99_RS25050 PF00709 Adenylosuccinate synthetase CLQ99_RS25055 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) CLQ99_RS25065 PF01145 SPFH domain / Band 7 family CLQ99_RS25070 PF01145 SPFH domain / Band 7 family CLQ99_RS25070 PF12221 Bacterial membrane protein N terminal CLQ99_RS25075 PF13167 GTP-binding GTPase N-terminal CLQ99_RS25075 PF01926 50S ribosome-binding GTPase CLQ99_RS25075 PF16360 GTP-binding GTPase Middle Region CLQ99_RS25080 PF17209 Hfq protein CLQ99_RS25090 PF01119 DNA mismatch repair protein, C-terminal domain CLQ99_RS25090 PF08676 MutL C terminal dimerisation domain CLQ99_RS25095 PF01520 N-acetylmuramoyl-L-alanine amidase CLQ99_RS25100 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CLQ99_RS25105 PF01256 Carbohydrate kinase CLQ99_RS25105 PF03853 YjeF-related protein N-terminus CLQ99_RS25110 PF08331 Domain of unknown function (DUF1730) CLQ99_RS25135 PF00497 Bacterial extracellular solute-binding proteins, family 3 CLQ99_RS25140 PF00929 Exonuclease CLQ99_RS25150 PF03193 RsgA GTPase CLQ99_RS25155 PF02666 Phosphatidylserine decarboxylase CLQ99_RS25160 PF12795 Mechanosensitive ion channel porin domain CLQ99_RS25160 PF12794 Mechanosensitive ion channel inner membrane domain 1 CLQ99_RS25160 PF00924 Mechanosensitive ion channel CLQ99_RS25165 PF13520 Amino acid permease CLQ99_RS25170 PF00152 tRNA synthetases class II (D, K and N) CLQ99_RS25175 PF02910 Fumarate reductase flavoprotein C-term CLQ99_RS25175 PF00890 FAD binding domain CLQ99_RS25180 PF13085 2Fe-2S iron-sulfur cluster binding domain CLQ99_RS25180 PF13183 4Fe-4S dicluster domain CLQ99_RS25185 PF02300 Fumarate reductase subunit C CLQ99_RS25190 PF02313 Fumarate reductase subunit D CLQ99_RS25195 PF08212 Lipocalin-like domain CLQ99_RS25200 PF00893 Small Multidrug Resistance protein CLQ99_RS25205 PF08085 Entericidin EcnA/B family CLQ99_RS25215 PF01132 Elongation factor P (EF-P) OB domain CLQ99_RS25215 PF08207 Elongation factor P (EF-P) KOW-like domain CLQ99_RS25215 PF09285 Elongation factor P, C-terminal CLQ99_RS25220 PF04055 Radical SAM superfamily CLQ99_RS25235 PF02753 Pili assembly chaperone PapD, C-terminal domain CLQ99_RS25235 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CLQ99_RS25240 PF13953 PapC C-terminal domain CLQ99_RS25240 PF13954 PapC N-terminal domain CLQ99_RS25240 PF00577 Outer membrane usher protein CLQ99_RS25260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ99_RS25260 PF00529 HlyD membrane-fusion protein of T1SS CLQ99_RS25265 PF00664 ABC transporter transmembrane region CLQ99_RS25265 PF00005 ABC transporter CLQ99_RS25265 PF03412 Peptidase C39 family CLQ99_RS25275 PF13698 Domain of unknown function (DUF4156) CLQ99_RS25280 PF00118 TCP-1/cpn60 chaperonin family CLQ99_RS25285 PF00166 Chaperonin 10 Kd subunit CLQ99_RS25290 PF13520 Amino acid permease CLQ99_RS25295 PF04186 FxsA cytoplasmic membrane protein CLQ99_RS25305 PF00206 Lyase CLQ99_RS25305 PF10415 Fumarase C C-terminus CLQ99_RS25310 PF03605 Anaerobic c4-dicarboxylate membrane transporter CLQ99_RS25315 PF03091 CutA1 divalent ion tolerance protein CLQ99_RS25320 PF11412 Disulphide bond corrector protein DsbC CLQ99_RS25320 PF02683 Cytochrome C biogenesis protein transmembrane region CLQ99_RS25360 PF01522 Polysaccharide deacetylase CLQ99_RS25360 PF14883 Hypothetical glycosyl hydrolase family 13 CLQ99_RS25365 PF00535 Glycosyl transferase family 2 CLQ99_RS25385 PF03741 Integral membrane protein TerC family CLQ99_RS25390 PF00226 DnaJ domain CLQ99_RS25390 PF01556 DnaJ C terminal domain CLQ99_RS25410 PF06406 StbA protein CLQ99_RS25420 PF11975 Family 4 glycosyl hydrolase C-terminal domain CLQ99_RS25420 PF02056 Family 4 glycosyl hydrolase CLQ99_RS25430 PF12833 Helix-turn-helix domain CLQ99_RS25435 PF00083 Sugar (and other) transporter CLQ99_RS25435 PF08946 Osmosensory transporter coiled coil CLQ99_RS25445 PF08274 PhnA Zinc-Ribbon CLQ99_RS25445 PF03831 PhnA domain CLQ99_RS25450 PF06983 3-demethylubiquinone-9 3-methyltransferase CLQ99_RS25455 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS25455 PF07702 UTRA domain CLQ99_RS25460 PF06754 Phosphonate metabolism protein PhnG CLQ99_RS25465 PF05845 Bacterial phosphonate metabolism protein (PhnH) CLQ99_RS25470 PF05861 Bacterial phosphonate metabolism protein (PhnI) CLQ99_RS25475 PF06007 Phosphonate metabolism protein PhnJ CLQ99_RS25480 PF00005 ABC transporter CLQ99_RS25485 PF00005 ABC transporter CLQ99_RS25490 PF07969 Amidohydrolase family CLQ99_RS25500 PF12706 Beta-lactamase superfamily domain CLQ99_RS25510 PF13426 PAS domain CLQ99_RS25510 PF00072 Response regulator receiver domain CLQ99_RS25510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS25515 PF00005 ABC transporter CLQ99_RS25520 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS25525 PF13407 Periplasmic binding protein domain CLQ99_RS25545 PF00072 Response regulator receiver domain CLQ99_RS25545 PF00486 Transcriptional regulatory protein, C terminal CLQ99_RS25555 PF08238 Sel1 repeat CLQ99_RS25560 PF00375 Sodium:dicarboxylate symporter family CLQ99_RS25570 PF13193 AMP-binding enzyme C-terminal domain CLQ99_RS25570 PF00501 AMP-binding enzyme CLQ99_RS25570 PF16177 Acetyl-coenzyme A synthetase N-terminus CLQ99_RS25580 PF04341 Protein of unknown function, DUF485 CLQ99_RS25585 PF00474 Sodium:solute symporter family CLQ99_RS25600 PF00577 Outer membrane usher protein CLQ99_RS25600 PF13953 PapC C-terminal domain CLQ99_RS25600 PF13954 PapC N-terminal domain CLQ99_RS25605 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain CLQ99_RS25605 PF02753 Pili assembly chaperone PapD, C-terminal domain CLQ99_RS25610 PF00419 Fimbrial protein CLQ99_RS25615 PF04172 LrgB-like family CLQ99_RS25620 PF03788 LrgA family CLQ99_RS25625 PF03466 LysR substrate binding domain CLQ99_RS25625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS25630 PF00999 Sodium/hydrogen exchanger family CLQ99_RS25635 PF00860 Permease family CLQ99_RS25640 PF02798 Glutathione S-transferase, N-terminal domain CLQ99_RS25640 PF00043 Glutathione S-transferase, C-terminal domain CLQ99_RS25645 PF09278 MerR, DNA binding CLQ99_RS25645 PF00376 MerR family regulatory protein CLQ99_RS25650 PF12833 Helix-turn-helix domain CLQ99_RS25655 PF00563 EAL domain CLQ99_RS25655 PF12792 CSS motif domain associated with EAL CLQ99_RS25665 PF15940 Family of unknown function CLQ99_RS25670 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS25685 PF08402 TOBE domain CLQ99_RS25685 PF00005 ABC transporter CLQ99_RS25690 PF12706 Beta-lactamase superfamily domain CLQ99_RS25690 PF00753 Metallo-beta-lactamase superfamily CLQ99_RS25695 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS25700 PF00459 Inositol monophosphatase family CLQ99_RS25715 PF07244 Surface antigen variable number repeat CLQ99_RS25715 PF01103 Surface antigen CLQ99_RS25725 PF07519 Tannase and feruloyl esterase CLQ99_RS25730 PF12833 Helix-turn-helix domain CLQ99_RS25735 PF00593 TonB dependent receptor CLQ99_RS25735 PF07715 TonB-dependent Receptor Plug Domain CLQ99_RS25740 PF01464 Transglycosylase SLT domain CLQ99_RS25745 PF00436 Single-strand binding protein family CLQ99_RS25755 PF00005 ABC transporter CLQ99_RS25755 PF17755 UvrA DNA-binding domain CLQ99_RS25755 PF17760 UvrA interaction domain CLQ99_RS25760 PF04237 YjbR CLQ99_RS25765 PF01894 Uncharacterised protein family UPF0047 CLQ99_RS25770 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CLQ99_RS25775 PF00155 Aminotransferase class I and II CLQ99_RS25780 PF00842 Alanine racemase, C-terminal domain CLQ99_RS25780 PF01168 Alanine racemase, N-terminal domain CLQ99_RS25785 PF00772 DnaB-like helicase N terminal domain CLQ99_RS25785 PF03796 DnaB-like helicase C terminal domain CLQ99_RS25790 PF00107 Zinc-binding dehydrogenase CLQ99_RS25790 PF08240 Alcohol dehydrogenase GroES-like domain CLQ99_RS25795 PF09583 Phage shock protein G (Phageshock_PspG) CLQ99_RS25800 PF01207 Dihydrouridine synthase (Dus) CLQ99_RS25810 PF01475 Ferric uptake regulator family CLQ99_RS25815 PF05532 CsbD-like CLQ99_RS25820 PF01554 MatE CLQ99_RS25825 PF01726 LexA DNA binding domain CLQ99_RS25825 PF00717 Peptidase S24-like CLQ99_RS25830 PF01219 Prokaryotic diacylglycerol kinase CLQ99_RS25835 PF01553 Acyltransferase CLQ99_RS25840 PF01040 UbiA prenyltransferase family CLQ99_RS25845 PF04345 Chorismate lyase CLQ99_RS25850 PF07148 Maltose operon periplasmic protein precursor (MalM) CLQ99_RS25855 PF02264 LamB porin CLQ99_RS25860 PF17912 MalK OB fold domain CLQ99_RS25860 PF00005 ABC transporter CLQ99_RS25870 PF01547 Bacterial extracellular solute-binding protein CLQ99_RS25875 PF14785 Maltose transport system permease protein MalF P2 domain CLQ99_RS25875 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS25880 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS25885 PF06146 Phosphate-starvation-inducible E CLQ99_RS25890 PF03313 Serine dehydratase alpha chain CLQ99_RS25905 PF01042 Endoribonuclease L-PSP CLQ99_RS25915 PF00132 Bacterial transferase hexapeptide (six repeats) CLQ99_RS25915 PF14602 Hexapeptide repeat of succinyl-transferase CLQ99_RS25915 PF12804 MobA-like NTP transferase domain CLQ99_RS25920 PF00342 Phosphoglucose isomerase CLQ99_RS25935 PF01842 ACT domain CLQ99_RS25935 PF00696 Amino acid kinase family CLQ99_RS25940 PF01758 Sodium Bile acid symporter family CLQ99_RS25945 PF11656 YjbD family (DUF3811) CLQ99_RS25950 PF01479 S4 domain CLQ99_RS25950 PF00849 RNA pseudouridylate synthase CLQ99_RS25955 PF13936 Helix-turn-helix domain CLQ99_RS25955 PF04198 Putative sugar-binding domain CLQ99_RS25960 PF00106 short chain dehydrogenase CLQ99_RS25965 PF03610 PTS system fructose IIA component CLQ99_RS25970 PF03830 PTS system sorbose subfamily IIB component CLQ99_RS25975 PF03609 PTS system sorbose-specific iic component CLQ99_RS25980 PF03613 PTS system mannose/fructose/sorbose family IID component CLQ99_RS25985 PF00107 Zinc-binding dehydrogenase CLQ99_RS25985 PF08240 Alcohol dehydrogenase GroES-like domain CLQ99_RS25990 PF08501 Shikimate dehydrogenase substrate binding domain CLQ99_RS25995 PF02690 Na+/Pi-cotransporter CLQ99_RS26000 PF00809 Pterin binding enzyme CLQ99_RS26000 PF02310 B12 binding domain CLQ99_RS26000 PF02607 B12 binding domain CLQ99_RS26000 PF02965 Vitamin B12 dependent methionine synthase, activation domain CLQ99_RS26000 PF02574 Homocysteine S-methyltransferase CLQ99_RS26005 PF01614 Bacterial transcriptional regulator CLQ99_RS26005 PF09339 IclR helix-turn-helix domain CLQ99_RS26010 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) CLQ99_RS26015 PF00463 Isocitrate lyase family CLQ99_RS26020 PF01274 Malate synthase CLQ99_RS26025 PF04204 Homoserine O-succinyltransferase CLQ99_RS26030 PF13673 Acetyltransferase (GNAT) domain CLQ99_RS26055 PF01808 AICARFT/IMPCHase bienzyme CLQ99_RS26055 PF02142 MGS-like domain CLQ99_RS26060 PF02843 Phosphoribosylglycinamide synthetase, C domain CLQ99_RS26060 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CLQ99_RS26060 PF02844 Phosphoribosylglycinamide synthetase, N domain CLQ99_RS26065 PF00072 Response regulator receiver domain CLQ99_RS26065 PF00158 Sigma-54 interaction domain CLQ99_RS26065 PF02954 Bacterial regulatory protein, Fis family CLQ99_RS26070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS26070 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS26075 PF13801 Heavy-metal resistance CLQ99_RS26080 PF07356 Protein of unknown function (DUF1481) CLQ99_RS26085 PF00216 Bacterial DNA-binding protein CLQ99_RS26090 PF04222 Protein of unknown function (DUF416) CLQ99_RS26095 PF04493 Endonuclease V CLQ99_RS26100 PF01208 Uroporphyrinogen decarboxylase (URO-D) CLQ99_RS26105 PF00293 NUDIX domain CLQ99_RS26105 PF09297 NADH pyrophosphatase zinc ribbon domain CLQ99_RS26110 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ CLQ99_RS26115 PF13667 ThiC-associated domain CLQ99_RS26115 PF01964 Radical SAM ThiC family CLQ99_RS26120 PF02581 Thiamine monophosphate synthase CLQ99_RS26125 PF00899 ThiF family CLQ99_RS26130 PF02597 ThiS family CLQ99_RS26135 PF05690 Thiazole biosynthesis protein ThiG CLQ99_RS26140 PF06968 Biotin and Thiamin Synthesis associated domain CLQ99_RS26140 PF04055 Radical SAM superfamily CLQ99_RS26145 PF00990 Diguanylate cyclase, GGDEF domain CLQ99_RS26150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CLQ99_RS26155 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CLQ99_RS26160 PF03605 Anaerobic c4-dicarboxylate membrane transporter CLQ99_RS26165 PF04998 RNA polymerase Rpb1, domain 5 CLQ99_RS26165 PF04997 RNA polymerase Rpb1, domain 1 CLQ99_RS26165 PF05000 RNA polymerase Rpb1, domain 4 CLQ99_RS26165 PF00623 RNA polymerase Rpb1, domain 2 CLQ99_RS26165 PF04983 RNA polymerase Rpb1, domain 3 CLQ99_RS26170 PF10385 RNA polymerase beta subunit external 1 domain CLQ99_RS26170 PF04560 RNA polymerase Rpb2, domain 7 CLQ99_RS26170 PF00562 RNA polymerase Rpb2, domain 6 CLQ99_RS26170 PF04565 RNA polymerase Rpb2, domain 3 CLQ99_RS26170 PF04561 RNA polymerase Rpb2, domain 2 CLQ99_RS26170 PF04563 RNA polymerase beta subunit CLQ99_RS26175 PF00542 Ribosomal protein L7/L12 C-terminal domain CLQ99_RS26175 PF16320 Ribosomal protein L7/L12 dimerisation domain CLQ99_RS26180 PF00466 Ribosomal protein L10 CLQ99_RS26185 PF00687 Ribosomal protein L1p/L10e family CLQ99_RS26190 PF00298 Ribosomal protein L11, RNA binding domain CLQ99_RS26190 PF03946 Ribosomal protein L11, N-terminal domain CLQ99_RS26195 PF00467 KOW motif CLQ99_RS26195 PF02357 Transcription termination factor nusG CLQ99_RS26200 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CLQ99_RS26210 PF03144 Elongation factor Tu domain 2 CLQ99_RS26210 PF00009 Elongation factor Tu GTP binding domain CLQ99_RS26210 PF03143 Elongation factor Tu C-terminal domain CLQ99_RS26235 PF00485 Phosphoribulokinase / Uridine kinase family CLQ99_RS26240 PF02237 Biotin protein ligase C terminal domain CLQ99_RS26240 PF03099 Biotin/lipoate A/B protein ligase family CLQ99_RS26240 PF08279 HTH domain CLQ99_RS26245 PF01565 FAD binding domain CLQ99_RS26245 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CLQ99_RS26275 PF12724 Flavodoxin domain CLQ99_RS26280 PF02386 Cation transport protein CLQ99_RS26285 PF01205 Uncharacterized protein family UPF0029 CLQ99_RS26285 PF09186 Domain of unknown function (DUF1949) CLQ99_RS26290 PF00557 Metallopeptidase family M24 CLQ99_RS26300 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CLQ99_RS26300 PF00378 Enoyl-CoA hydratase/isomerase CLQ99_RS26300 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CLQ99_RS26305 PF02803 Thiolase, C-terminal domain CLQ99_RS26305 PF00108 Thiolase, N-terminal domain CLQ99_RS26310 PF00175 Oxidoreductase NAD-binding domain CLQ99_RS26310 PF00970 Oxidoreductase FAD-binding domain CLQ99_RS26315 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CLQ99_RS26320 PF02357 Transcription termination factor nusG CLQ99_RS26325 PF01026 TatD related DNase CLQ99_RS26330 PF00902 Sec-independent protein translocase protein (TatC) CLQ99_RS26340 PF02416 mttA/Hcf106 family CLQ99_RS26345 PF03109 ABC1 family CLQ99_RS26350 PF02036 SCP-2 sterol transfer family CLQ99_RS26355 PF01209 ubiE/COQ5 methyltransferase family CLQ99_RS26360 PF02646 RmuC family CLQ99_RS26365 PF01048 Phosphorylase superfamily CLQ99_RS26370 PF01738 Dienelactone hydrolase family CLQ99_RS26375 PF01717 Cobalamin-independent synthase, Catalytic domain CLQ99_RS26375 PF08267 Cobalamin-independent synthase, N-terminal domain CLQ99_RS26380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS26380 PF03466 LysR substrate binding domain CLQ99_RS26385 PF00892 EamA-like transporter family CLQ99_RS26395 PF12146 Serine aminopeptidase, S33 CLQ99_RS26400 PF01810 LysE type translocator CLQ99_RS26405 PF04754 Putative transposase, YhgA-like CLQ99_RS26410 PF01810 LysE type translocator CLQ99_RS26415 PF16124 RecQ zinc-binding CLQ99_RS26415 PF09382 RQC domain CLQ99_RS26415 PF00570 HRDC domain CLQ99_RS26415 PF00271 Helicase conserved C-terminal domain CLQ99_RS26415 PF00270 DEAD/DEAH box helicase CLQ99_RS26420 PF02253 Phospholipase A1 CLQ99_RS26425 PF03061 Thioesterase superfamily CLQ99_RS26430 PF00892 EamA-like transporter family CLQ99_RS26435 PF01544 CorA-like Mg2+ transporter protein CLQ99_RS26445 PF13361 UvrD-like helicase C-terminal domain CLQ99_RS26445 PF00580 UvrD/REP helicase N-terminal domain CLQ99_RS26450 PF13419 Haloacid dehalogenase-like hydrolase CLQ99_RS26455 PF00589 Phage integrase family CLQ99_RS26455 PF02899 Phage integrase, N-terminal SAM-like domain CLQ99_RS26460 PF04340 Protein of unknown function, DUF484 CLQ99_RS26465 PF01678 Diaminopimelate epimerase CLQ99_RS26470 PF13627 Prokaryotic lipoprotein-attachment site CLQ99_RS26475 PF01491 Frataxin-like domain CLQ99_RS26480 PF12633 Adenylate cyclase NT domain CLQ99_RS26480 PF01295 Adenylate cyclase, class-I CLQ99_RS26485 PF03900 Porphobilinogen deaminase, C-terminal domain CLQ99_RS26485 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CLQ99_RS26490 PF02602 Uroporphyrinogen-III synthase HemD CLQ99_RS26495 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase CLQ99_RS26500 PF07219 HemY protein N-terminus CLQ99_RS26500 PF07719 Tetratricopeptide repeat CLQ99_RS26525 PF00324 Amino acid permease CLQ99_RS26530 PF03808 Glycosyl transferase WecB/TagA/CpsF family CLQ99_RS26535 PF06899 WzyE protein, O-antigen assembly polymerase CLQ99_RS26540 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CLQ99_RS26545 PF01943 Polysaccharide biosynthesis protein CLQ99_RS26550 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CLQ99_RS26560 PF00483 Nucleotidyl transferase CLQ99_RS26565 PF16363 GDP-mannose 4,6 dehydratase CLQ99_RS26570 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CLQ99_RS26570 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CLQ99_RS26570 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CLQ99_RS26575 PF02350 UDP-N-acetylglucosamine 2-epimerase CLQ99_RS26580 PF02706 Chain length determinant protein CLQ99_RS26585 PF00953 Glycosyl transferase family 4 CLQ99_RS26590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLQ99_RS26590 PF07497 Rho termination factor, RNA-binding domain CLQ99_RS26590 PF07498 Rho termination factor, N-terminal domain CLQ99_RS26600 PF00085 Thioredoxin CLQ99_RS26605 PF00270 DEAD/DEAH box helicase CLQ99_RS26605 PF00271 Helicase conserved C-terminal domain CLQ99_RS26615 PF02541 Ppx/GppA phosphatase family CLQ99_RS26620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS26620 PF03466 LysR substrate binding domain CLQ99_RS26630 PF04474 Protein of unknown function (DUF554) CLQ99_RS26635 PF00580 UvrD/REP helicase N-terminal domain CLQ99_RS26635 PF13361 UvrD-like helicase C-terminal domain CLQ99_RS26650 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CLQ99_RS26650 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CLQ99_RS26655 PF03466 LysR substrate binding domain CLQ99_RS26655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS26660 PF00291 Pyridoxal-phosphate dependent enzyme CLQ99_RS26660 PF00585 C-terminal regulatory domain of Threonine dehydratase CLQ99_RS26665 PF00920 Dehydratase family CLQ99_RS26670 PF01063 Amino-transferase class IV CLQ99_RS26680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CLQ99_RS26680 PF00205 Thiamine pyrophosphate enzyme, central domain CLQ99_RS26680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CLQ99_RS26685 PF08046 IlvGEDA operon leader peptide CLQ99_RS26690 PF01078 Magnesium chelatase, subunit ChlI CLQ99_RS26690 PF13335 Magnesium chelatase, subunit ChlI C-terminal CLQ99_RS26695 PF04219 Protein of unknown function, DUF CLQ99_RS26700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS26700 PF03466 LysR substrate binding domain CLQ99_RS26740 PF01177 Asp/Glu/Hydantoin racemase CLQ99_RS26745 PF07715 TonB-dependent Receptor Plug Domain CLQ99_RS26745 PF00593 TonB dependent receptor CLQ99_RS26750 PF05958 tRNA (Uracil-5-)-methyltransferase CLQ99_RS26755 PF07226 Protein of unknown function (DUF1422) CLQ99_RS26760 PF00440 Bacterial regulatory proteins, tetR family CLQ99_RS26765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLQ99_RS26765 PF07992 Pyridine nucleotide-disulphide oxidoreductase CLQ99_RS26770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS26770 PF03466 LysR substrate binding domain CLQ99_RS26780 PF14698 Argininosuccinate lyase C-terminal CLQ99_RS26780 PF00206 Lyase CLQ99_RS26790 PF00696 Amino acid kinase family CLQ99_RS26795 PF01118 Semialdehyde dehydrogenase, NAD binding domain CLQ99_RS26795 PF02774 Semialdehyde dehydrogenase, dimerisation domain CLQ99_RS26800 PF07687 Peptidase dimerisation domain CLQ99_RS26800 PF01546 Peptidase family M20/M25/M40 CLQ99_RS26805 PF00311 Phosphoenolpyruvate carboxylase CLQ99_RS26810 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CLQ99_RS26815 PF12833 Helix-turn-helix domain CLQ99_RS26820 PF00923 Transaldolase/Fructose-6-phosphate aldolase CLQ99_RS26825 PF00465 Iron-containing alcohol dehydrogenase CLQ99_RS26830 PF00892 EamA-like transporter family CLQ99_RS26835 PF02219 Methylenetetrahydrofolate reductase CLQ99_RS26840 PF03466 LysR substrate binding domain CLQ99_RS26840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS26845 PF02627 Carboxymuconolactone decarboxylase family CLQ99_RS26850 PF02872 5'-nucleotidase, C-terminal domain CLQ99_RS26850 PF00149 Calcineurin-like phosphoesterase CLQ99_RS26860 PF00742 Homoserine dehydrogenase CLQ99_RS26860 PF00696 Amino acid kinase family CLQ99_RS26860 PF03447 Homoserine dehydrogenase, NAD binding domain CLQ99_RS26865 PF01053 Cys/Met metabolism PLP-dependent enzyme CLQ99_RS26870 PF01340 Met Apo-repressor, MetJ CLQ99_RS26875 PF01197 Ribosomal protein L31 CLQ99_RS26880 PF18074 Primosomal protein N C-terminal domain CLQ99_RS26880 PF00271 Helicase conserved C-terminal domain CLQ99_RS26880 PF00270 DEAD/DEAH box helicase CLQ99_RS26880 PF17764 3′ DNA-binding domain (3′BD) CLQ99_RS26880 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CLQ99_RS26885 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS26890 PF05036 Sporulation related domain CLQ99_RS26895 PF00227 Proteasome subunit CLQ99_RS26900 PF10431 C-terminal, D2-small domain, of ClpB protein CLQ99_RS26900 PF07724 AAA domain (Cdc48 subfamily) CLQ99_RS26900 PF00004 ATPase family associated with various cellular activities (AAA) CLQ99_RS26905 PF01040 UbiA prenyltransferase family CLQ99_RS26910 PF03737 Aldolase/RraA CLQ99_RS26915 PF00365 Phosphofructokinase CLQ99_RS26920 PF16916 Dimerisation domain of Zinc Transporter CLQ99_RS26920 PF01545 Cation efflux family CLQ99_RS26925 PF07813 LTXXQ motif family protein CLQ99_RS26930 PF00486 Transcriptional regulatory protein, C terminal CLQ99_RS26930 PF00072 Response regulator receiver domain CLQ99_RS26935 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS26935 PF00672 HAMP domain CLQ99_RS26935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS26935 PF16527 Two-component sensor protein CpxA, periplasmic domain CLQ99_RS26940 PF03473 MOSC domain CLQ99_RS26940 PF03475 3-alpha domain CLQ99_RS26945 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CLQ99_RS26945 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CLQ99_RS26950 PF06379 L-rhamnose-proton symport protein (RhaT) CLQ99_RS26955 PF02311 AraC-like ligand binding domain CLQ99_RS26955 PF12833 Helix-turn-helix domain CLQ99_RS26960 PF02311 AraC-like ligand binding domain CLQ99_RS26960 PF12833 Helix-turn-helix domain CLQ99_RS26970 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CLQ99_RS26970 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CLQ99_RS26975 PF06134 L-rhamnose isomerase (RhaA) CLQ99_RS26980 PF00596 Class II Aldolase and Adducin N-terminal domain CLQ99_RS26985 PF13407 Periplasmic binding protein domain CLQ99_RS26990 PF00005 ABC transporter CLQ99_RS26995 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS27000 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS27005 PF00465 Iron-containing alcohol dehydrogenase CLQ99_RS27010 PF05336 L-rhamnose mutarotase CLQ99_RS27015 PF01306 LacY proton/sugar symporter CLQ99_RS27020 PF16874 Glycosyl hydrolase family 36 C-terminal domain CLQ99_RS27020 PF16875 Glycosyl hydrolase family 36 N-terminal domain CLQ99_RS27025 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS27025 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CLQ99_RS27050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CLQ99_RS27060 PF01116 Fructose-bisphosphate aldolase class-II CLQ99_RS27065 PF03611 PTS system sugar-specific permease component CLQ99_RS27075 PF00365 Phosphofructokinase CLQ99_RS27085 PF02634 FdhD/NarQ family CLQ99_RS27090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLQ99_RS27090 PF00384 Molybdopterin oxidoreductase CLQ99_RS27090 PF01568 Molydopterin dinucleotide binding domain CLQ99_RS27095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CLQ99_RS27095 PF01568 Molydopterin dinucleotide binding domain CLQ99_RS27095 PF00384 Molybdopterin oxidoreductase CLQ99_RS27100 PF13247 4Fe-4S dicluster domain CLQ99_RS27100 PF09163 Formate dehydrogenase N, transmembrane CLQ99_RS27105 PF01292 Prokaryotic cytochrome b561 CLQ99_RS27110 PF04216 Protein involved in formate dehydrogenase formation CLQ99_RS27125 PF07859 alpha/beta hydrolase fold CLQ99_RS27130 PF09500 Putative thioesterase (yiiD_Cterm) CLQ99_RS27130 PF00583 Acetyltransferase (GNAT) family CLQ99_RS27135 PF02580 D-Tyr-tRNA(Tyr) deacylase CLQ99_RS27140 PF03631 Virulence factor BrkB CLQ99_RS27145 PF13419 Haloacid dehalogenase-like hydrolase CLQ99_RS27150 PF00679 Elongation factor G C-terminus CLQ99_RS27150 PF00009 Elongation factor Tu GTP binding domain CLQ99_RS27150 PF03144 Elongation factor Tu domain 2 CLQ99_RS27155 PF00120 Glutamine synthetase, catalytic domain CLQ99_RS27155 PF03951 Glutamine synthetase, beta-Grasp domain CLQ99_RS27160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS27160 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS27160 PF00989 PAS fold CLQ99_RS27165 PF00072 Response regulator receiver domain CLQ99_RS27165 PF02954 Bacterial regulatory protein, Fis family CLQ99_RS27165 PF00158 Sigma-54 interaction domain CLQ99_RS27170 PF04055 Radical SAM superfamily CLQ99_RS27170 PF06969 HemN C-terminal domain CLQ99_RS27180 PF04220 Der GTPase activator (YihI) CLQ99_RS27185 PF01926 50S ribosome-binding GTPase CLQ99_RS27190 PF01612 3'-5' exonuclease CLQ99_RS27190 PF00476 DNA polymerase family A CLQ99_RS27190 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CLQ99_RS27190 PF01367 5'-3' exonuclease, C-terminal SAM fold CLQ99_RS27200 PF01553 Acyltransferase CLQ99_RS27205 PF01323 DSBA-like thioredoxin domain CLQ99_RS27210 PF01636 Phosphotransferase enzyme family CLQ99_RS27215 PF06288 Protein of unknown function (DUF1040) CLQ99_RS27220 PF12804 MobA-like NTP transferase domain CLQ99_RS27225 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CLQ99_RS27255 PF00392 Bacterial regulatory proteins, gntR family CLQ99_RS27255 PF07729 FCD domain CLQ99_RS27260 PF07690 Major Facilitator Superfamily CLQ99_RS27265 PF00356 Bacterial regulatory proteins, lacI family CLQ99_RS27270 PF00294 pfkB family carbohydrate kinase CLQ99_RS27275 PF13407 Periplasmic binding protein domain CLQ99_RS27280 PF02653 Branched-chain amino acid transport system / permease component CLQ99_RS27285 PF00005 ABC transporter CLQ99_RS27290 PF05025 RbsD / FucU transport protein family CLQ99_RS27295 PF02705 K+ potassium transporter CLQ99_RS27300 PF07728 AAA domain (dynein-related subfamily) CLQ99_RS27300 PF12592 Protein of unknown function (DUF3763) CLQ99_RS27300 PF17868 AAA lid domain CLQ99_RS27305 PF05762 VWA domain containing CoxE-like protein CLQ99_RS27310 PF03590 Aspartate-ammonia ligase CLQ99_RS27315 PF01037 Lrp/AsnC ligand binding domain CLQ99_RS27320 PF00258 Flavodoxin CLQ99_RS27325 PF13932 GidA associated domain CLQ99_RS27325 PF01134 Glucose inhibited division protein A CLQ99_RS27330 PF02527 rRNA small subunit methyltransferase G CLQ99_RS27335 PF03899 ATP synthase I chain CLQ99_RS27340 PF00119 ATP synthase A chain CLQ99_RS27345 PF00137 ATP synthase subunit C CLQ99_RS27350 PF00430 ATP synthase B/B' CF(0) CLQ99_RS27355 PF00213 ATP synthase delta (OSCP) subunit CLQ99_RS27360 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLQ99_RS27360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLQ99_RS27360 PF00306 ATP synthase alpha/beta chain, C terminal domain CLQ99_RS27365 PF00231 ATP synthase CLQ99_RS27370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CLQ99_RS27370 PF02874 ATP synthase alpha/beta family, beta-barrel domain CLQ99_RS27375 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CLQ99_RS27375 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CLQ99_RS27385 PF12804 MobA-like NTP transferase domain CLQ99_RS27385 PF00132 Bacterial transferase hexapeptide (six repeats) CLQ99_RS27390 PF01380 SIS domain CLQ99_RS27395 PF12849 PBP superfamily domain CLQ99_RS27400 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS27405 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS27410 PF00005 ABC transporter CLQ99_RS27415 PF01895 PhoU domain CLQ99_RS27425 PF11471 Maltoporin periplasmic N-terminal extension CLQ99_RS27425 PF02264 LamB porin CLQ99_RS27430 PF00756 Putative esterase CLQ99_RS27430 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CLQ99_RS27435 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CLQ99_RS27440 PF13419 Haloacid dehalogenase-like hydrolase CLQ99_RS27450 PF00860 Permease family CLQ99_RS27455 PF03358 NADPH-dependent FMN reductase CLQ99_RS27465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS27465 PF03466 LysR substrate binding domain CLQ99_RS27470 PF07690 Major Facilitator Superfamily CLQ99_RS27480 PF10396 GTP-binding protein TrmE N-terminus CLQ99_RS27480 PF12631 MnmE helical domain CLQ99_RS27480 PF01926 50S ribosome-binding GTPase CLQ99_RS27485 PF14849 YidC periplasmic domain CLQ99_RS27485 PF02096 60Kd inner membrane protein CLQ99_RS27490 PF01809 Putative membrane protein insertion efficiency factor CLQ99_RS27495 PF00825 Ribonuclease P CLQ99_RS27500 PF00468 Ribosomal protein L34 CLQ99_RS27505 PF08048 Tap RepA1 leader peptide CLQ99_RS27510 PF02387 IncFII RepA protein family CLQ99_RS27520 PF02517 CPBP intramembrane metalloprotease CLQ99_RS27530 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CLQ99_RS27545 PF13610 DDE domain CLQ99_RS27555 PF13610 DDE domain CLQ99_RS27575 PF00239 Resolvase, N terminal domain CLQ99_RS27575 PF02796 Helix-turn-helix domain of resolvase CLQ99_RS27585 PF13610 DDE domain CLQ99_RS27600 PF13737 Transposase DDE domain CLQ99_RS27615 PF13610 DDE domain CLQ99_RS27630 PF13610 DDE domain CLQ99_RS27645 PF02796 Helix-turn-helix domain of resolvase CLQ99_RS27645 PF00239 Resolvase, N terminal domain CLQ99_RS27655 PF07091 Ribosomal RNA methyltransferase (FmrO) CLQ99_RS27665 PF13610 DDE domain CLQ99_RS27670 PF03400 IS1 transposase CLQ99_RS27695 PF10784 Plasmid stability protein CLQ99_RS27700 PF06406 StbA protein CLQ99_RS27715 PF01555 DNA methylase CLQ99_RS27725 PF07128 Protein of unknown function (DUF1380) CLQ99_RS27735 PF07339 Protein of unknown function (DUF1472) CLQ99_RS27740 PF03230 Antirestriction protein CLQ99_RS27745 PF07128 Protein of unknown function (DUF1380) CLQ99_RS27755 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLQ99_RS27795 PF00436 Single-strand binding protein family CLQ99_RS27800 PF06006 Bacterial protein of unknown function (DUF905) CLQ99_RS27810 PF06290 Plasmid SOS inhibition protein (PsiB) CLQ99_RS27815 PF06952 PsiA protein CLQ99_RS27845 PF06067 Domain of unknown function (DUF932) CLQ99_RS27850 PF01464 Transglycosylase SLT domain CLQ99_RS27855 PF05261 TraM protein, DNA-binding CLQ99_RS27860 PF00989 PAS fold CLQ99_RS27865 PF05509 TraY domain CLQ99_RS27870 PF05513 TraA CLQ99_RS27875 PF07178 TraL protein CLQ99_RS27880 PF05309 TraE protein CLQ99_RS27885 PF06586 TraK protein CLQ99_RS27890 PF03743 Bacterial conjugation TrbI-like protein CLQ99_RS27895 PF07296 TraP protein CLQ99_RS27900 PF10894 Protein of unknown function (DUF2689) CLQ99_RS27910 PF09676 Type IV conjugative transfer system lipoprotein (TraV) CLQ99_RS27915 PF01258 Prokaryotic dksA/traR C4-type zinc finger CLQ99_RS27920 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer CLQ99_RS27925 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) CLQ99_RS27930 PF12477 Sex factor F TraW protein N terminal CLQ99_RS27935 PF06834 TraU protein CLQ99_RS27950 PF09673 Type-F conjugative transfer system pilin assembly protein CLQ99_RS27965 PF06986 Type-1V conjugative transfer system mating pair stabilisation CLQ99_RS27970 PF11100 Conjugal transfer protein TrbE CLQ99_RS27975 PF13728 F plasmid transfer operon protein CLQ99_RS27980 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) CLQ99_RS27985 PF13728 F plasmid transfer operon protein CLQ99_RS28000 PF06122 Conjugative relaxosome accessory transposon protein CLQ99_RS28005 PF07916 TraG-like protein, N-terminal region CLQ99_RS28015 PF05818 Enterobacterial TraT complement resistance protein CLQ99_RS28025 PF12615 F sex factor protein N terminal CLQ99_RS28025 PF10412 Type IV secretion-system coupling protein DNA-binding domain CLQ99_RS28030 PF18340 DNA relaxase TraI 2B/2B-like domain CLQ99_RS28030 PF08751 TrwC relaxase CLQ99_RS28030 PF18272 single-stranded DNA binding TraI N-terminal subdomain CLQ99_RS28030 PF07057 DNA helicase TraI CLQ99_RS28035 PF13610 DDE domain CLQ99_RS28050 PF05598 Transposase domain (DUF772) CLQ99_RS28050 PF01609 Transposase DDE domain CLQ99_RS28070 PF04754 Putative transposase, YhgA-like CLQ99_RS28080 PF00239 Resolvase, N terminal domain CLQ99_RS28080 PF02796 Helix-turn-helix domain of resolvase CLQ99_RS28085 PF18607 ParA helix turn helix domain CLQ99_RS28085 PF13614 AAA domain CLQ99_RS28090 PF08775 ParB family CLQ99_RS28090 PF02195 ParB-like nuclease domain CLQ99_RS28100 PF13438 Domain of unknown function (DUF4113) CLQ99_RS28100 PF00817 impB/mucB/samB family CLQ99_RS28100 PF11799 impB/mucB/samB family C-terminal domain CLQ99_RS28105 PF00717 Peptidase S24-like CLQ99_RS28110 PF02586 SOS response associated peptidase (SRAP) CLQ99_RS28115 PF01555 DNA methylase CLQ99_RS28125 PF07128 Protein of unknown function (DUF1380) CLQ99_RS28145 PF06440 DNA polymerase III, theta subunit CLQ99_RS28155 PF06006 Bacterial protein of unknown function (DUF905) CLQ99_RS28165 PF06290 Plasmid SOS inhibition protein (PsiB) CLQ99_RS28170 PF06952 PsiA protein CLQ99_RS28190 PF13610 DDE domain CLQ99_RS28205 PF07178 TraL protein CLQ99_RS28210 PF05513 TraA CLQ99_RS28215 PF05509 TraY domain CLQ99_RS28225 PF05261 TraM protein, DNA-binding CLQ99_RS28230 PF01464 Transglycosylase SLT domain CLQ99_RS28240 PF06067 Domain of unknown function (DUF932) CLQ99_RS28315 PF01848 Hok/gef family CLQ99_RS28340 PF06290 Plasmid SOS inhibition protein (PsiB) CLQ99_RS28345 PF02195 ParB-like nuclease domain CLQ99_RS28350 PF06006 Bacterial protein of unknown function (DUF905) CLQ99_RS28355 PF00436 Single-strand binding protein family CLQ99_RS28370 PF00398 Ribosomal RNA adenine dimethylase CLQ99_RS28410 PF06440 DNA polymerase III, theta subunit CLQ99_RS28425 PF03230 Antirestriction protein CLQ99_RS28435 PF07128 Protein of unknown function (DUF1380) CLQ99_RS28445 PF01555 DNA methylase CLQ99_RS28460 PF06406 StbA protein CLQ99_RS28465 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLQ99_RS28475 PF00717 Peptidase S24-like CLQ99_RS28480 PF00817 impB/mucB/samB family CLQ99_RS28480 PF13438 Domain of unknown function (DUF4113) CLQ99_RS28480 PF11799 impB/mucB/samB family C-terminal domain CLQ99_RS28485 PF08775 ParB family CLQ99_RS28485 PF02195 ParB-like nuclease domain CLQ99_RS28490 PF18607 ParA helix turn helix domain CLQ99_RS28490 PF13614 AAA domain CLQ99_RS28505 PF01051 Initiator Replication protein CLQ99_RS28515 PF00589 Phage integrase family CLQ99_RS28550 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CLQ99_RS28555 PF01850 PIN domain CLQ99_RS28560 PF02463 RecF/RecN/SMC N terminal domain CLQ99_RS28580 PF02371 Transposase IS116/IS110/IS902 family CLQ99_RS28580 PF01548 Transposase CLQ99_RS28585 PF13700 Domain of unknown function (DUF4158) CLQ99_RS28585 PF01526 Tn3 transposase DDE domain CLQ99_RS28595 PF13610 DDE domain CLQ99_RS28605 PF05857 TraX protein CLQ99_RS28610 PF12602 Fertility inhibition protein N terminal CLQ99_RS28610 PF04352 ProQ/FINO family CLQ99_RS28635 PF01848 Hok/gef family CLQ99_RS28640 PF10723 Replication regulatory protein RepB CLQ99_RS28650 PF01051 Initiator Replication protein CLQ99_RS28660 PF00589 Phage integrase family CLQ99_RS28665 PF00990 Diguanylate cyclase, GGDEF domain CLQ99_RS28665 PF13185 GAF domain CLQ99_RS28670 PF00990 Diguanylate cyclase, GGDEF domain CLQ99_RS28670 PF00563 EAL domain CLQ99_RS28670 PF00498 FHA domain CLQ99_RS28680 PF13737 Transposase DDE domain CLQ99_RS28690 PF00563 EAL domain CLQ99_RS28690 PF12792 CSS motif domain associated with EAL CLQ99_RS28695 PF10011 Predicted membrane protein (DUF2254) CLQ99_RS28700 PF02028 BCCT, betaine/carnitine/choline family transporter CLQ99_RS28730 PF00672 HAMP domain CLQ99_RS28730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS28730 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS28735 PF00486 Transcriptional regulatory protein, C terminal CLQ99_RS28735 PF00072 Response regulator receiver domain CLQ99_RS28740 PF02321 Outer membrane efflux protein CLQ99_RS28745 PF11604 Copper binding periplasmic protein CusF CLQ99_RS28750 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CLQ99_RS28755 PF00873 AcrB/AcrD/AcrF family CLQ99_RS28765 PF04945 YHS domain CLQ99_RS28775 PF01551 Peptidase family M23 CLQ99_RS28775 PF08525 Opacity-associated protein A N-terminal motif CLQ99_RS28775 PF01476 LysM domain CLQ99_RS28785 PF07732 Multicopper oxidase CLQ99_RS28785 PF00394 Multicopper oxidase CLQ99_RS28785 PF07731 Multicopper oxidase CLQ99_RS28790 PF05275 Copper resistance protein B precursor (CopB) CLQ99_RS28795 PF04234 CopC domain CLQ99_RS28800 PF05425 Copper resistance protein D CLQ99_RS28805 PF00072 Response regulator receiver domain CLQ99_RS28805 PF00486 Transcriptional regulatory protein, C terminal CLQ99_RS28810 PF00672 HAMP domain CLQ99_RS28810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CLQ99_RS28810 PF00512 His Kinase A (phospho-acceptor) domain CLQ99_RS28830 PF00230 Major intrinsic protein CLQ99_RS28845 PF03358 NADPH-dependent FMN reductase CLQ99_RS28870 PF03960 ArsC family CLQ99_RS28875 PF02040 Arsenical pump membrane protein CLQ99_RS28880 PF02374 Anion-transporting ATPase CLQ99_RS28885 PF06953 Arsenical resistance operon trans-acting repressor ArsD CLQ99_RS28890 PF01022 Bacterial regulatory protein, arsR family CLQ99_RS28915 PF05321 Haemolysin expression modulating protein CLQ99_RS28950 PF01435 Peptidase family M48 CLQ99_RS28970 PF07724 AAA domain (Cdc48 subfamily) CLQ99_RS28970 PF00004 ATPase family associated with various cellular activities (AAA) CLQ99_RS28970 PF10431 C-terminal, D2-small domain, of ClpB protein CLQ99_RS28970 PF02861 Clp amino terminal domain, pathogenicity island component CLQ99_RS28970 PF17871 AAA lid domain CLQ99_RS28975 PF00011 Hsp20/alpha crystallin family CLQ99_RS28980 PF12728 Helix-turn-helix domain CLQ99_RS29000 PF01609 Transposase DDE domain CLQ99_RS29000 PF05598 Transposase domain (DUF772) CLQ99_RS29015 PF03466 LysR substrate binding domain CLQ99_RS29015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS29020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLQ99_RS29020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLQ99_RS29025 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS29035 PF00005 ABC transporter CLQ99_RS29045 PF13610 DDE domain CLQ99_RS29055 PF01548 Transposase CLQ99_RS29055 PF02371 Transposase IS116/IS110/IS902 family CLQ99_RS29060 PF13610 DDE domain CLQ99_RS29065 PF01636 Phosphotransferase enzyme family CLQ99_RS29070 PF13610 DDE domain CLQ99_RS29080 PF13495 Phage integrase, N-terminal SAM-like domain CLQ99_RS29080 PF00589 Phage integrase family CLQ99_RS29085 PF00186 Dihydrofolate reductase CLQ99_RS29095 PF13427 Domain of unknown function (DUF4111) CLQ99_RS29100 PF00893 Small Multidrug Resistance protein CLQ99_RS29105 PF00809 Pterin binding enzyme CLQ99_RS29120 PF01548 Transposase CLQ99_RS29120 PF02371 Transposase IS116/IS110/IS902 family CLQ99_RS29130 PF03551 Transcriptional regulator PadR-like family CLQ99_RS29140 PF13610 DDE domain CLQ99_RS29165 PF01636 Phosphotransferase enzyme family CLQ99_RS29175 PF13610 DDE domain CLQ99_RS29185 PF13700 Domain of unknown function (DUF4158) CLQ99_RS29185 PF01526 Tn3 transposase DDE domain CLQ99_RS29190 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CLQ99_RS29200 PF02517 CPBP intramembrane metalloprotease CLQ99_RS29225 PF02387 IncFII RepA protein family CLQ99_RS29235 PF10723 Replication regulatory protein RepB CLQ99_RS29280 PF11867 Domain of unknown function (DUF3387) CLQ99_RS29280 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CLQ99_RS29280 PF18766 SWI2/SNF2 ATPase CLQ99_RS29290 PF03695 Uncharacterised protein family (UPF0149) CLQ99_RS29290 PF02810 SEC-C motif CLQ99_RS29300 PF12161 HsdM N-terminal domain CLQ99_RS29300 PF02384 N-6 DNA Methylase CLQ99_RS29310 PF12602 Fertility inhibition protein N terminal CLQ99_RS29310 PF04352 ProQ/FINO family CLQ99_RS29315 PF05857 TraX protein CLQ99_RS29320 PF18272 single-stranded DNA binding TraI N-terminal subdomain CLQ99_RS29320 PF07057 DNA helicase TraI CLQ99_RS29320 PF18340 DNA relaxase TraI 2B/2B-like domain CLQ99_RS29320 PF08751 TrwC relaxase CLQ99_RS29325 PF10412 Type IV secretion-system coupling protein DNA-binding domain CLQ99_RS29325 PF12615 F sex factor protein N terminal CLQ99_RS29335 PF05818 Enterobacterial TraT complement resistance protein CLQ99_RS29345 PF07916 TraG-like protein, N-terminal region CLQ99_RS29350 PF06122 Conjugative relaxosome accessory transposon protein CLQ99_RS29360 PF13728 F plasmid transfer operon protein CLQ99_RS29365 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) CLQ99_RS29370 PF13728 F plasmid transfer operon protein CLQ99_RS29385 PF11100 Conjugal transfer protein TrbE CLQ99_RS29390 PF06986 Type-1V conjugative transfer system mating pair stabilisation CLQ99_RS29395 PF09673 Type-F conjugative transfer system pilin assembly protein CLQ99_RS29400 PF06834 TraU protein CLQ99_RS29410 PF12477 Sex factor F TraW protein N terminal CLQ99_RS29415 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) CLQ99_RS29420 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer CLQ99_RS29465 PF09676 Type IV conjugative transfer system lipoprotein (TraV) CLQ99_RS29475 PF03743 Bacterial conjugation TrbI-like protein CLQ99_RS29480 PF06586 TraK protein CLQ99_RS29485 PF05309 TraE protein CLQ99_RS29490 PF07178 TraL protein CLQ99_RS29495 PF05513 TraA CLQ99_RS29500 PF05509 TraY domain CLQ99_RS29510 PF05261 TraM protein, DNA-binding CLQ99_RS29515 PF01464 Transglycosylase SLT domain CLQ99_RS29525 PF06067 Domain of unknown function (DUF932) CLQ99_RS29545 PF01381 Helix-turn-helix CLQ99_RS29600 PF01848 Hok/gef family CLQ99_RS29615 PF00248 Aldo/keto reductase family CLQ99_RS29625 PF05717 IS66 Orf2 like protein CLQ99_RS29635 PF08220 DeoR-like helix-turn-helix domain CLQ99_RS29635 PF00455 DeoR C terminal sensor domain CLQ99_RS29640 PF01380 SIS domain CLQ99_RS29645 PF00480 ROK family CLQ99_RS29650 PF00083 Sugar (and other) transporter CLQ99_RS29670 PF01070 FMN-dependent dehydrogenase CLQ99_RS29680 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS29685 PF00528 Binding-protein-dependent transport system inner membrane component CLQ99_RS29700 PF03466 LysR substrate binding domain CLQ99_RS29700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CLQ99_RS29705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CLQ99_RS29710 PF01220 Dehydroquinase class II CLQ99_RS29720 PF16197 Ketoacyl-synthetase C-terminal extension CLQ99_RS29720 PF08240 Alcohol dehydrogenase GroES-like domain CLQ99_RS29720 PF14765 Polyketide synthase dehydratase CLQ99_RS29720 PF00550 Phosphopantetheine attachment site CLQ99_RS29720 PF08659 KR domain CLQ99_RS29720 PF00109 Beta-ketoacyl synthase, N-terminal domain CLQ99_RS29720 PF00698 Acyl transferase domain CLQ99_RS29720 PF02801 Beta-ketoacyl synthase, C-terminal domain CLQ99_RS29725 PF08402 TOBE domain CLQ99_RS29725 PF00005 ABC transporter CLQ99_RS29730 PF07687 Peptidase dimerisation domain CLQ99_RS29730 PF01546 Peptidase family M20/M25/M40 CLQ99_RS29740 PF01042 Endoribonuclease L-PSP CLQ99_RS29750 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CLQ99_RS29755 PF01850 PIN domain CLQ99_RS29760 PF13737 Transposase DDE domain CLQ99_RS29780 PF06290 Plasmid SOS inhibition protein (PsiB) CLQ99_RS29785 PF02195 ParB-like nuclease domain CLQ99_RS29790 PF06006 Bacterial protein of unknown function (DUF905) CLQ99_RS29795 PF00436 Single-strand binding protein family CLQ99_RS29850 PF03230 Antirestriction protein CLQ99_RS29870 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CLQ99_RS29880 PF00717 Peptidase S24-like CLQ99_RS29885 PF11799 impB/mucB/samB family C-terminal domain CLQ99_RS29885 PF00817 impB/mucB/samB family CLQ99_RS29885 PF13438 Domain of unknown function (DUF4113) CLQ99_RS29910 PF02195 ParB-like nuclease domain CLQ99_RS29910 PF18090 Centromere-binding protein HTH domain CLQ99_RS29915 PF13614 AAA domain CLQ99_RS29930 PF06519 TolA C-terminal CLQ99_RS29955 PF01815 Rop protein CLQ99_RS29980 PF02402 Lysis protein CLQ99_RS29985 PF03513 Cloacin immunity protein CLQ99_RS29990 PF05713 Bacterial mobilisation protein (MobC)