locus-tag	class	description
DKC09_RS00065	COG2948	multi-organism process
DKC09_RS00070	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
DKC09_RS00095	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DKC09_RS00180	COG1528	Iron-storage protein
DKC09_RS00190	COG3039	Transposase
DKC09_RS00210	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DKC09_RS00230	COG4644	lycopene metabolic process
DKC09_RS00300	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DKC09_RS00325	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS00400	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DKC09_RS00485	COG4598	ABC transporter
DKC09_RS00490	COG0765	amino acid transport
DKC09_RS00495	COG0765	amino acid transport
DKC09_RS00505	COG0583	DNA-binding transcription factor activity
DKC09_RS00525	COG1595	DNA-templated transcription, initiation
DKC09_RS00530	COG3712	iron ion homeostasis
DKC09_RS00535	COG4772	TonB-dependent receptor
DKC09_RS00540	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
DKC09_RS00545	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DKC09_RS00550	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DKC09_RS00555	COG1120	ATPase activity
DKC09_RS00560	COG3436	PFAM IS66 Orf2 family protein
DKC09_RS00585	COG1609	Transcriptional regulator
DKC09_RS00595	COG2223	nitrite transmembrane transporter activity
DKC09_RS00735	COG1475	DNA binding
DKC09_RS00765	COG3111	PFAM Bacterial OB fold (BOF) protein
DKC09_RS00780	COG2814	Major facilitator Superfamily
DKC09_RS00875	COG5499	transcription regulator containing HTH domain
DKC09_RS00975	COG1917	Cupin 2, conserved barrel domain protein
DKC09_RS00975	COG2169	Transcriptional regulator
DKC09_RS00985	COG2009	succinate dehydrogenase
DKC09_RS01005	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DKC09_RS01015	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
DKC09_RS01050	COG0625	glutathione transferase activity
DKC09_RS01055	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DKC09_RS01095	COG4644	lycopene metabolic process
DKC09_RS01165	COG1196	nuclear chromosome segregation
DKC09_RS01225	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
DKC09_RS01260	COG3039	Transposase
DKC09_RS01270	COG2205	protein histidine kinase activity
DKC09_RS01275	COG0745	RESPONSE REGULATOR receiver
DKC09_RS01280	COG1276	copper resistance
DKC09_RS01285	COG2372	response to copper ion
DKC09_RS01290	COG3667	copper resistance
DKC09_RS01295	COG2132	Multicopper oxidase
DKC09_RS01305	COG0739	heme binding
DKC09_RS01335	COG0714	Associated with various cellular activities
DKC09_RS01370	COG5001	Diguanylate cyclase
DKC09_RS01395	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DKC09_RS01485	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DKC09_RS01565	COG1192	Involved in chromosome partitioning
DKC09_RS01650	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DKC09_RS01725	COG1525	nuclease
DKC09_RS01770	COG0616	signal peptide processing
DKC09_RS01845	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DKC09_RS01880	COG1172	Belongs to the binding-protein-dependent transport system permease family
DKC09_RS01885	COG1129	ABC transporter
DKC09_RS01890	COG1879	ABC-type sugar transport system periplasmic component
DKC09_RS01895	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DKC09_RS01910	COG0784	Response regulator, receiver
DKC09_RS01910	COG2198	Histidine kinase
DKC09_RS01910	COG5002	protein histidine kinase activity
DKC09_RS01915	COG0683	leucine binding
DKC09_RS01930	COG1131	(ABC) transporter
DKC09_RS01935	COG0410	ABC transporter
DKC09_RS01940	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DKC09_RS01945	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DKC09_RS01960	COG2911	Protein conserved in bacteria
DKC09_RS01960	COG3210	domain, Protein
DKC09_RS01965	COG4644	lycopene metabolic process
DKC09_RS02055	COG0659	secondary active sulfate transmembrane transporter activity
DKC09_RS02060	COG0589	response to stress
DKC09_RS02065	COG1216	Glycosyl transferase, family 2
DKC09_RS02065	COG1442	glycosyl transferase family 8
DKC09_RS02170	COG0305	Participates in initiation and elongation during chromosome replication
DKC09_RS02225	COG1192	Involved in chromosome partitioning
DKC09_RS02270	COG5642	Protein of unknown function (DUF2384)
DKC09_RS02275	COG5654	RES domain protein
DKC09_RS02405	COG1199	ATP-dependent helicase activity
DKC09_RS02685	COG3385	transposase activity
DKC09_RS02690	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
DKC09_RS02770	COG0210	DNA helicase
DKC09_RS02865	COG2963	transposase activity
DKC09_RS02870	COG2826	transposase and inactivated derivatives, IS30 family
DKC09_RS02885	COG3344	reverse transcriptase
DKC09_RS03005	COG2376	Dihydroxyacetone kinase
DKC09_RS03010	COG1461	Dihydroxyacetone kinase
DKC09_RS03025	COG2375	cellular response to nickel ion
DKC09_RS03040	COG1061	Type III restriction enzyme res subunit
DKC09_RS03050	COG3039	Transposase
DKC09_RS03105	COG2974	May be involved in recombination
DKC09_RS03265	COG3423	Transcriptional regulator
DKC09_RS03280	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DKC09_RS03285	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DKC09_RS03315	COG0446	pyridine nucleotide-disulphide oxidoreductase
DKC09_RS03320	COG0640	Transcriptional regulator
DKC09_RS03325	COG0783	Belongs to the Dps family
DKC09_RS03340	COG1342	Belongs to the UPF0251 family
DKC09_RS03350	COG3039	Transposase
DKC09_RS03375	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
DKC09_RS03530	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DKC09_RS03560	COG0789	Transcriptional regulator
DKC09_RS03720	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
DKC09_RS03820	COG1357	PFAM Pentapeptide repeats (8 copies)
DKC09_RS03980	COG0633	Ferredoxin
DKC09_RS04030	COG0629	single-stranded DNA binding
DKC09_RS04050	COG1012	belongs to the aldehyde dehydrogenase family
DKC09_RS04055	COG0583	DNA-binding transcription factor activity
DKC09_RS04065	COG0039	L-malate dehydrogenase activity
DKC09_RS04070	COG1349	DNA-binding transcription factor activity
DKC09_RS04075	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
DKC09_RS04080	COG3395	kinase activity
DKC09_RS04090	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DKC09_RS04095	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DKC09_RS04100	COG2271	Major facilitator Superfamily
DKC09_RS04125	COG4977	sequence-specific DNA binding
DKC09_RS04135	COG0697	spore germination
DKC09_RS04140	COG2814	Major facilitator Superfamily
DKC09_RS04175	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
DKC09_RS04210	COG2223	nitrite transmembrane transporter activity
DKC09_RS04215	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DKC09_RS04230	COG1349	DNA-binding transcription factor activity
DKC09_RS04235	COG2084	Dehydrogenase
DKC09_RS04240	COG3395	kinase activity
DKC09_RS04245	COG0235	Class ii aldolase
DKC09_RS04250	COG3622	Belongs to the hyi family
DKC09_RS04255	COG2610	gluconate transmembrane transporter activity
DKC09_RS04260	COG3708	Transcriptional regulator
DKC09_RS04260	COG2207	Transcriptional regulator
DKC09_RS04270	COG2200	EAL domain
DKC09_RS04275	COG1546	Belongs to the CinA family
DKC09_RS04280	COG0071	Belongs to the small heat shock protein (HSP20) family
DKC09_RS04290	COG2135	peptidase activity
DKC09_RS04295	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DKC09_RS04315	COG4221	oxidoreductase activity
DKC09_RS04320	COG1802	Transcriptional regulator
DKC09_RS04330	COG0246	Mannitol dehydrogenase
DKC09_RS04335	COG2271	Major facilitator Superfamily
DKC09_RS04350	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DKC09_RS04365	COG0243	molybdopterin cofactor binding
DKC09_RS04370	COG0437	4 iron, 4 sulfur cluster binding
DKC09_RS04385	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
DKC09_RS04390	COG1940	carbohydrate kinase activity
DKC09_RS04395	COG0583	DNA-binding transcription factor activity
DKC09_RS04400	COG2814	Major facilitator Superfamily
DKC09_RS04405	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
DKC09_RS04415	COG3591	Belongs to the peptidase S1B family
DKC09_RS04435	COG0628	permease
DKC09_RS04465	COG0679	Auxin Efflux Carrier
DKC09_RS04475	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DKC09_RS04500	COG3290	protein histidine kinase activity
DKC09_RS04505	COG4565	transcriptional regulatory protein
DKC09_RS04530	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
DKC09_RS04530	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
DKC09_RS04540	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DKC09_RS04545	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DKC09_RS04555	COG0183	Belongs to the thiolase family
DKC09_RS04560	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DKC09_RS04570	COG1414	Transcriptional regulator
DKC09_RS04575	COG2840	Smr protein MutS2
DKC09_RS04580	COG0583	DNA-binding transcription factor activity
DKC09_RS04590	COG1473	amidohydrolase
DKC09_RS04595	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
DKC09_RS04610	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DKC09_RS04625	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
DKC09_RS04630	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
DKC09_RS04650	COG0531	amino acid
DKC09_RS04660	COG3136	membrane protein required for alginate biosynthesis
DKC09_RS04665	COG0745	RESPONSE REGULATOR receiver
DKC09_RS04675	COG2205	protein histidine kinase activity
DKC09_RS04685	COG0114	fumarate hydratase activity
DKC09_RS04690	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
DKC09_RS04690	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
DKC09_RS04695	COG1482	cell wall glycoprotein biosynthetic process
DKC09_RS04700	COG5339	Protein conserved in bacteria
DKC09_RS04705	COG1609	Transcriptional regulator
DKC09_RS04710	COG1263	PTS System
DKC09_RS04710	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DKC09_RS04715	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
DKC09_RS04740	COG0425	Belongs to the sulfur carrier protein TusA family
DKC09_RS04745	COG5562	phage envelope protein
DKC09_RS04750	COG0401	homolog of Blt101
DKC09_RS04755	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
DKC09_RS04760	COG1012	belongs to the aldehyde dehydrogenase family
DKC09_RS04765	COG1434	Gram-negative-bacterium-type cell wall biogenesis
DKC09_RS04770	COG0477	Major facilitator Superfamily
DKC09_RS04775	COG1113	amino acid transport
DKC09_RS04780	COG2988	succinylglutamate desuccinylase activity
DKC09_RS04785	COG3724	N-succinylarginine dihydrolase activity
DKC09_RS04790	COG1012	belongs to the aldehyde dehydrogenase family
DKC09_RS04795	COG3138	arginine N-succinyltransferase
DKC09_RS04800	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DKC09_RS04805	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DKC09_RS04820	COG0183	Belongs to the thiolase family
DKC09_RS04830	COG0667	Aldo Keto reductase
DKC09_RS04835	COG2814	Major facilitator Superfamily
DKC09_RS04840	COG0667	Aldo Keto reductase
DKC09_RS04845	COG0583	DNA-binding transcription factor activity
DKC09_RS04870	COG4122	O-methyltransferase activity
DKC09_RS04875	COG1643	Atp-dependent helicase
DKC09_RS04890	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DKC09_RS04895	COG3327	negative regulation of DNA-templated transcription, initiation
DKC09_RS04900	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
DKC09_RS04905	COG0183	Belongs to the thiolase family
DKC09_RS04910	COG2050	protein possibly involved in aromatic compounds catabolism
DKC09_RS04915	COG1250	3-hydroxyacyl-CoA dehydrogenase
DKC09_RS04920	COG1024	Enoyl-CoA hydratase
DKC09_RS04925	COG1024	Enoyl-CoA hydratase
DKC09_RS04930	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DKC09_RS04935	COG2151	metal-sulfur cluster biosynthetic enzyme
DKC09_RS04940	COG3396	Phenylacetate-CoA oxygenase
DKC09_RS04945	COG3460	Phenylacetate-CoA oxygenase
DKC09_RS04950	COG3396	Phenylacetate-CoA oxygenase
DKC09_RS04955	COG2030	dehydratase
DKC09_RS04955	COG1012	belongs to the aldehyde dehydrogenase family
DKC09_RS04995	COG2072	flavoprotein involved in K transport
DKC09_RS05000	COG0583	DNA-binding transcription factor activity
DKC09_RS05005	COG1126	abc transporter atp-binding protein
DKC09_RS05015	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DKC09_RS05030	COG1012	belongs to the aldehyde dehydrogenase family
DKC09_RS05035	COG2207	Transcriptional regulator
DKC09_RS05040	COG3784	Protein of unknown function (DUF1318)
DKC09_RS05050	COG2911	Protein conserved in bacteria
DKC09_RS05060	COG0586	Pfam SNARE associated Golgi protein
DKC09_RS05065	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DKC09_RS05070	COG3187	Heat shock protein
DKC09_RS05075	COG3042	response to heat
DKC09_RS05085	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
DKC09_RS05085	COG0674	pyruvate-flavodoxin oxidoreductase activity
DKC09_RS05085	COG1013	pyruvate-flavodoxin oxidoreductase activity
DKC09_RS05085	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DKC09_RS05090	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DKC09_RS05100	COG0589	response to stress
DKC09_RS05130	COG0513	Belongs to the DEAD box helicase family
DKC09_RS05145	COG1349	DNA-binding transcription factor activity
DKC09_RS05150	COG0673	inositol 2-dehydrogenase activity
DKC09_RS05160	COG1113	amino acid transport
DKC09_RS05165	COG1522	sequence-specific DNA binding
DKC09_RS05175	COG1448	Aminotransferase
DKC09_RS05180	COG2011	ABC-type metal ion transport system permease component
DKC09_RS05185	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DKC09_RS05195	COG0436	Aminotransferase
DKC09_RS05220	COG0583	DNA-binding transcription factor activity
DKC09_RS05240	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS05330	COG2885	chlorophyll binding
DKC09_RS05355	COG0693	protein deglycase activity
DKC09_RS05360	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS05365	COG0583	DNA-binding transcription factor activity
DKC09_RS05425	COG2205	protein histidine kinase activity
DKC09_RS05425	COG0784	Response regulator, receiver
DKC09_RS05425	COG5002	protein histidine kinase activity
DKC09_RS05430	COG3250	beta-galactosidase activity
DKC09_RS05435	COG0656	L-ascorbic acid biosynthetic process
DKC09_RS05460	COG4166	transmembrane transport
DKC09_RS05465	COG2866	Carboxypeptidase
DKC09_RS05470	COG4948	Mandelate Racemase Muconate Lactonizing
DKC09_RS05475	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DKC09_RS05480	COG3180	Ammonia monooxygenase
DKC09_RS05490	COG1486	melibiose metabolic process
DKC09_RS05495	COG0583	DNA-binding transcription factor activity
DKC09_RS05505	COG3106	COG3106 Predicted ATPase
DKC09_RS05515	COG1983	PspC domain protein
DKC09_RS05525	COG1842	Phage shock protein A
DKC09_RS05530	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
DKC09_RS05540	COG1473	amidohydrolase
DKC09_RS05555	COG0702	epimerase
DKC09_RS05570	COG4171	peptide transport system, permease
DKC09_RS05585	COG2986	histidine ammonia-lyase
DKC09_RS05620	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DKC09_RS05620	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DKC09_RS05635	COG1349	DNA-binding transcription factor activity
DKC09_RS05645	COG0023	Translation Initiation Factor
DKC09_RS05655	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
DKC09_RS05660	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
DKC09_RS05665	COG0671	phosphoesterase, PA-phosphatase related
DKC09_RS05675	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DKC09_RS05705	COG0616	signal peptide processing
DKC09_RS05715	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS05720	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
DKC09_RS05735	COG0009	L-threonylcarbamoyladenylate synthase
DKC09_RS05745	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DKC09_RS05750	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DKC09_RS05750	COG0512	Glutamine amidotransferase of anthranilate synthase
DKC09_RS05755	COG0134	indole-3-glycerol-phosphate synthase activity
DKC09_RS05755	COG0135	phosphoribosylanthranilate isomerase activity
DKC09_RS05800	COG4774	siderophore transport
DKC09_RS05810	COG3047	cAMP biosynthetic process
DKC09_RS05815	COG0727	PFAM Uncharacterised protein family (UPF0153)
DKC09_RS05840	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DKC09_RS05845	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS05850	COG1988	membrane-bound metal-dependent
DKC09_RS05855	COG1823	symporter activity
DKC09_RS05865	COG0753	catalase activity
DKC09_RS05875	COG1486	melibiose metabolic process
DKC09_RS05880	COG2169	Transcriptional regulator
DKC09_RS05880	COG1917	Cupin 2, conserved barrel domain protein
DKC09_RS05885	COG1447	Phosphotransferase system cellobiose-specific component IIA
DKC09_RS05890	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DKC09_RS05895	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DKC09_RS05900	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DKC09_RS05910	COG0322	excinuclease ABC activity
DKC09_RS05915	COG3678	ATP-independent chaperone mediated protein folding
DKC09_RS05925	COG3724	N-succinylarginine dihydrolase activity
DKC09_RS05935	COG3138	arginine N-succinyltransferase
DKC09_RS05945	COG0708	Exodeoxyribonuclease III
DKC09_RS05950	COG0398	Pfam SNARE associated Golgi protein
DKC09_RS05955	COG0398	Pfam SNARE associated Golgi protein
DKC09_RS05960	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DKC09_RS05965	COG4134	Bacterial extracellular solute-binding protein
DKC09_RS05970	COG4135	transport system, permease component
DKC09_RS05975	COG4136	ATPase activity
DKC09_RS05980	COG2897	thiosulfate sulfurtransferase activity
DKC09_RS05985	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DKC09_RS05990	COG0494	nUDIX hydrolase
DKC09_RS05995	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DKC09_RS06005	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DKC09_RS06010	COG0709	Synthesizes selenophosphate from selenide and ATP
DKC09_RS06025	COG0778	Nitroreductase
DKC09_RS06030	COG0616	signal peptide processing
DKC09_RS06035	COG0252	asparaginase activity
DKC09_RS06040	COG1335	isochorismatase
DKC09_RS06055	COG3139	Protein of unknown function (DUF1315)
DKC09_RS06075	COG0656	L-ascorbic acid biosynthetic process
DKC09_RS06080	COG3713	MltA-interacting MipA family protein
DKC09_RS06085	COG2766	serine protein kinase
DKC09_RS06100	COG0386	Belongs to the glutathione peroxidase family
DKC09_RS06125	COG1126	abc transporter atp-binding protein
DKC09_RS06130	COG0765	amino acid transport
DKC09_RS06135	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DKC09_RS06145	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DKC09_RS06160	COG0300	oxidoreductase activity
DKC09_RS06165	COG0583	DNA-binding transcription factor activity
DKC09_RS06170	COG1902	pentaerythritol trinitrate reductase activity
DKC09_RS06180	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS06185	COG0583	DNA-binding transcription factor activity
DKC09_RS06205	COG2271	Major facilitator Superfamily
DKC09_RS06210	COG0179	Fumarylacetoacetate (FAA) hydrolase
DKC09_RS06215	COG4948	Mandelate Racemase Muconate Lactonizing
DKC09_RS06220	COG0583	DNA-binding transcription factor activity
DKC09_RS06235	COG0673	inositol 2-dehydrogenase activity
DKC09_RS06240	COG0477	Major facilitator Superfamily
DKC09_RS06240	COG2814	Major facilitator Superfamily
DKC09_RS06280	COG0859	PFAM glycosyl transferase family 9
DKC09_RS06285	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DKC09_RS06295	COG2207	Transcriptional regulator
DKC09_RS06300	COG2807	transmembrane transport
DKC09_RS06305	COG0504	CTP synthase activity
DKC09_RS06310	COG1683	Conserved Protein
DKC09_RS06315	COG3189	MarR family transcriptional regulator
DKC09_RS06320	COG3042	response to heat
DKC09_RS06465	COG4695	Portal protein
DKC09_RS06480	COG0464	growth
DKC09_RS06490	COG0338	D12 class N6 adenine-specific DNA methyltransferase
DKC09_RS06535	COG4974	Belongs to the 'phage' integrase family
DKC09_RS06540	COG2199	diguanylate cyclase activity
DKC09_RS06540	COG2203	Gaf domain
DKC09_RS06560	COG3182	Iron-regulated membrane protein
DKC09_RS06570	COG1560	Kdo2-lipid A biosynthetic process
DKC09_RS06580	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
DKC09_RS06585	COG3706	GGDEF domain
DKC09_RS06590	COG0583	DNA-binding transcription factor activity
DKC09_RS06595	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
DKC09_RS06605	COG2771	luxR family
DKC09_RS06605	COG2200	EAL domain
DKC09_RS06620	COG2207	Transcriptional regulator
DKC09_RS06635	COG1566	PFAM secretion protein HlyD family protein
DKC09_RS06640	COG1294	oxidase, subunit
DKC09_RS06645	COG1271	oxidase subunit
DKC09_RS06650	COG3546	catalase activity
DKC09_RS06655	COG3685	Protein conserved in bacteria
DKC09_RS06660	COG3685	Protein conserved in bacteria
DKC09_RS06665	COG3729	General stress protein
DKC09_RS06670	COG1063	alcohol dehydrogenase
DKC09_RS06675	COG3813	Protein conserved in bacteria
DKC09_RS06705	COG0640	Transcriptional regulator
DKC09_RS06710	COG0538	isocitrate dehydrogenase activity
DKC09_RS06730	COG2199	diguanylate cyclase activity
DKC09_RS06730	COG2203	Gaf domain
DKC09_RS06820	COG0616	signal peptide processing
DKC09_RS06835	COG1802	Transcriptional regulator
DKC09_RS06835	COG4626	Terminase
DKC09_RS06870	COG3772	lysozyme
DKC09_RS06890	COG1403	HNH endonuclease
DKC09_RS06975	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DKC09_RS06985	COG0582	viral genome integration into host DNA
DKC09_RS06990	COG0538	isocitrate dehydrogenase activity
DKC09_RS07010	COG2135	peptidase activity
DKC09_RS07015	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DKC09_RS07020	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DKC09_RS07140	COG4695	Portal protein
DKC09_RS07145	COG4626	Terminase
DKC09_RS07145	COG1802	Transcriptional regulator
DKC09_RS07245	COG1403	HNH endonuclease
DKC09_RS07260	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DKC09_RS07270	COG4725	Belongs to the MT-A70-like family
DKC09_RS07280	COG1802	Transcriptional regulator
DKC09_RS07280	COG4626	Terminase
DKC09_RS07305	COG3436	PFAM IS66 Orf2 family protein
DKC09_RS07310	COG4372	Transposase
DKC09_RS07320	COG1396	sequence-specific DNA binding
DKC09_RS07340	COG5532	Uncharacterized conserved protein (DUF2303)
DKC09_RS07345	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
DKC09_RS07380	COG0582	viral genome integration into host DNA
DKC09_RS07385	COG0538	isocitrate dehydrogenase activity
DKC09_RS07390	COG1187	pseudouridine synthase activity
DKC09_RS07410	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DKC09_RS07430	COG2205	protein histidine kinase activity
DKC09_RS07435	COG2850	peptidyl-arginine hydroxylation
DKC09_RS07455	COG1177	transmembrane transport
DKC09_RS07470	COG0318	PFAM AMP-dependent synthetase and ligase
DKC09_RS07480	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DKC09_RS07490	COG4591	ABC-type transport system involved in lipoprotein release permease component
DKC09_RS07495	COG1136	(ABC) transporter
DKC09_RS07500	COG4591	ABC-type transport system involved in lipoprotein release permease component
DKC09_RS07510	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DKC09_RS07515	COG1376	ErfK ybiS ycfS ynhG family protein
DKC09_RS07515	COG1388	LysM domain
DKC09_RS07525	COG1309	transcriptional regulator
DKC09_RS07535	COG3134	Outer membrane lipoprotein
DKC09_RS07540	COG1252	NADH dehydrogenase
DKC09_RS07555	COG0510	thiamine kinase activity
DKC09_RS07565	COG5633	Lipoprotein
DKC09_RS07570	COG0537	adenosine 5'-monophosphoramidase activity
DKC09_RS07585	COG0084	hydrolase, TatD family'
DKC09_RS07590	COG0470	DNA polymerase III
DKC09_RS07600	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DKC09_RS07605	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DKC09_RS07610	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DKC09_RS07625	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DKC09_RS07645	COG1399	metal-binding, possibly nucleic acid-binding protein
DKC09_RS07650	COG0424	maF-like protein
DKC09_RS07665	COG1530	ribonuclease E activity
DKC09_RS07670	COG0583	DNA-binding transcription factor activity
DKC09_RS07675	COG2814	Major facilitator Superfamily
DKC09_RS07680	COG0728	peptidoglycan biosynthetic process
DKC09_RS07695	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DKC09_RS07745	COG1560	Kdo2-lipid A biosynthetic process
DKC09_RS07765	COG5645	(Lipo)protein
DKC09_RS07805	COG3381	protein complex oligomerization
DKC09_RS07825	COG0583	DNA-binding transcription factor activity
DKC09_RS07835	COG1335	isochorismatase
DKC09_RS07865	COG1702	phosphate starvation-inducible protein PhoH
DKC09_RS07885	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DKC09_RS07895	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DKC09_RS07915	COG1309	transcriptional regulator
DKC09_RS07950	COG2233	PERMEase
DKC09_RS07970	COG3729	General stress protein
DKC09_RS07995	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS08010	COG0531	amino acid
DKC09_RS08020	COG0174	glutamine synthetase
DKC09_RS08025	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
DKC09_RS08030	COG1396	sequence-specific DNA binding
DKC09_RS08030	COG1917	Cupin 2, conserved barrel domain protein
DKC09_RS08035	COG1012	belongs to the aldehyde dehydrogenase family
DKC09_RS08040	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DKC09_RS08045	COG0583	DNA-binding transcription factor activity
DKC09_RS08050	COG0473	3-isopropylmalate dehydrogenase activity
DKC09_RS08055	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DKC09_RS08055	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DKC09_RS08055	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DKC09_RS08060	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DKC09_RS08065	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DKC09_RS08070	COG1882	Formate acetyltransferase
DKC09_RS08075	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DKC09_RS08080	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DKC09_RS08090	COG2207	Transcriptional regulator
DKC09_RS08095	COG3706	GGDEF domain
DKC09_RS08115	COG2200	EAL domain
DKC09_RS08125	COG0058	SHG alpha-glucan phosphorylase activity
DKC09_RS08140	COG0670	Belongs to the BI1 family
DKC09_RS08155	COG2207	Transcriptional regulator
DKC09_RS08160	COG1881	PFAM PEBP family protein
DKC09_RS08175	COG1832	CoA-binding protein
DKC09_RS08185	COG0210	DNA helicase
DKC09_RS08190	COG3304	Inner membrane component domain
DKC09_RS08195	COG1289	transmembrane transporter activity
DKC09_RS08200	COG3070	regulator of competence-specific genes
DKC09_RS08225	COG1067	ATP-dependent peptidase activity
DKC09_RS08235	COG3130	regulation of translation
DKC09_RS08245	COG3009	Protein conserved in bacteria
DKC09_RS08250	COG3008	intermembrane lipid transfer
DKC09_RS08250	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
DKC09_RS08255	COG2995	paraquat-inducible protein a
DKC09_RS08260	COG0488	(ABC) transporter
DKC09_RS08270	COG0633	Ferredoxin
DKC09_RS08270	COG3217	Mosc domain protein beta barrel domain protein
DKC09_RS08285	COG0431	NADPH-dependent FMN reductase
DKC09_RS08290	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DKC09_RS08295	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DKC09_RS08300	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DKC09_RS08310	COG0308	aminopeptidase N
DKC09_RS08330	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DKC09_RS08335	COG1448	Aminotransferase
DKC09_RS08340	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DKC09_RS08345	COG3108	Peptidase M15
DKC09_RS08355	COG2989	Protein conserved in bacteria
DKC09_RS08365	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
DKC09_RS08375	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
DKC09_RS08380	COG1434	Gram-negative-bacterium-type cell wall biogenesis
DKC09_RS08385	COG3173	Aminoglycoside phosphotransferase
DKC09_RS08400	COG3214	Protein conserved in bacteria
DKC09_RS08415	COG0658	competence protein
DKC09_RS08415	COG2333	competence protein COMEC
DKC09_RS08425	COG0539	negative regulation of cytoplasmic translation
DKC09_RS08435	COG0501	Belongs to the peptidase M48B family
DKC09_RS08450	COG2323	membrane
DKC09_RS08455	COG1944	ATP diphosphatase activity
DKC09_RS08460	COG2116	formate transmembrane transporter activity
DKC09_RS08465	COG1882	Formate acetyltransferase
DKC09_RS08470	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DKC09_RS08475	COG0477	Major facilitator Superfamily
DKC09_RS08485	COG3302	dmso reductase anchor subunit
DKC09_RS08490	COG0437	4 iron, 4 sulfur cluster binding
DKC09_RS08510	COG0243	molybdopterin cofactor binding
DKC09_RS08520	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DKC09_RS08530	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DKC09_RS08530	COG1674	ftsk spoiiie
DKC09_RS08545	COG0492	ferredoxin-NADP+ reductase activity
DKC09_RS08550	COG4988	ABC transporter
DKC09_RS08555	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DKC09_RS08570	COG0542	response to heat
DKC09_RS08580	COG1278	Cold shock
DKC09_RS08590	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DKC09_RS08595	COG3593	DNA synthesis involved in DNA repair
DKC09_RS08605	COG2431	L-lysine efflux transmembrane transporter activity
DKC09_RS08615	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DKC09_RS08625	COG0028	Belongs to the TPP enzyme family
DKC09_RS08630	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
DKC09_RS08635	COG0702	epimerase
DKC09_RS08640	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DKC09_RS08645	COG3023	N-Acetylmuramoyl-L-alanine amidase
DKC09_RS08650	COG4251	negative regulation of phosphorylation
DKC09_RS08650	COG3706	GGDEF domain
DKC09_RS08650	COG2203	Gaf domain
DKC09_RS08650	COG5001	Diguanylate cyclase
DKC09_RS08665	COG1126	abc transporter atp-binding protein
DKC09_RS08670	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DKC09_RS08675	COG4215	(ABC) transporter
DKC09_RS08680	COG4160	amino acid transport
DKC09_RS08685	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DKC09_RS08690	COG5002	protein histidine kinase activity
DKC09_RS08695	COG0745	RESPONSE REGULATOR receiver
DKC09_RS08700	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DKC09_RS08710	COG1177	transmembrane transport
DKC09_RS08715	COG1176	ABC-type spermidine putrescine transport system, permease component I
DKC09_RS08720	COG3842	ATPase activity
DKC09_RS08725	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DKC09_RS08740	COG0778	Nitroreductase
DKC09_RS08765	COG3226	Transcriptional regulator
DKC09_RS08770	COG0738	Major facilitator superfamily
DKC09_RS08775	COG0561	phosphatase activity
DKC09_RS08780	COG2814	Major facilitator Superfamily
DKC09_RS08790	COG0671	phosphoesterase, PA-phosphatase related
DKC09_RS08795	COG1349	DNA-binding transcription factor activity
DKC09_RS08800	COG1686	Belongs to the peptidase S11 family
DKC09_RS08805	COG0625	glutathione transferase activity
DKC09_RS08810	COG2133	pyrroloquinoline quinone binding
DKC09_RS08850	COG0747	negative chemotaxis
DKC09_RS08860	COG1446	asparaginase
DKC09_RS08865	COG0303	'Molybdopterin
DKC09_RS08870	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DKC09_RS08875	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DKC09_RS08880	COG1882	Formate acetyltransferase
DKC09_RS08885	COG0561	phosphatase activity
DKC09_RS08895	COG1609	Transcriptional regulator
DKC09_RS08900	COG2271	Major facilitator Superfamily
DKC09_RS08915	COG0488	(ABC) transporter
DKC09_RS08925	COG1376	ErfK ybiS ycfS ynhG family protein
DKC09_RS08930	COG2188	Transcriptional regulator
DKC09_RS08935	COG2723	6-phospho-beta-galactosidase activity
DKC09_RS08940	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DKC09_RS08945	COG1321	iron dependent repressor
DKC09_RS08955	COG2194	sulfuric ester hydrolase activity
DKC09_RS08960	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
DKC09_RS08975	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DKC09_RS08980	COG0765	amino acid transport
DKC09_RS08985	COG1126	abc transporter atp-binding protein
DKC09_RS08990	COG0668	transmembrane transport
DKC09_RS09000	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DKC09_RS09010	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DKC09_RS09020	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DKC09_RS09025	COG1199	ATP-dependent helicase activity
DKC09_RS09030	COG0513	Belongs to the DEAD box helicase family
DKC09_RS09040	COG1309	transcriptional regulator
DKC09_RS09045	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DKC09_RS09050	COG1131	(ABC) transporter
DKC09_RS09055	COG0842	Transport permease protein
DKC09_RS09060	COG0842	Transport permease protein
DKC09_RS09070	COG3568	Endonuclease Exonuclease Phosphatase
DKC09_RS09075	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DKC09_RS09080	COG0392	lysyltransferase activity
DKC09_RS09090	COG0670	Belongs to the BI1 family
DKC09_RS09095	COG0314	molybdopterin synthase activity
DKC09_RS09100	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
DKC09_RS09110	COG0521	Mo-molybdopterin cofactor biosynthetic process
DKC09_RS09135	COG0745	RESPONSE REGULATOR receiver
DKC09_RS09140	COG0642	Histidine kinase
DKC09_RS09175	COG2226	methyltransferase
DKC09_RS09195	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DKC09_RS09200	COG1881	PFAM PEBP family protein
DKC09_RS09240	COG4677	pectinesterase activity
DKC09_RS09250	COG0589	response to stress
DKC09_RS09255	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DKC09_RS09285	COG0789	Transcriptional regulator
DKC09_RS09290	COG2200	EAL domain
DKC09_RS09315	COG0561	phosphatase activity
DKC09_RS09325	COG4149	molybdate abc transporter
DKC09_RS09330	COG0725	ABC transporter, periplasmic molybdate-binding protein
DKC09_RS09340	COG3585	molybdate ion transport
DKC09_RS09340	COG2005	Transcriptional regulator
DKC09_RS09345	COG1119	ATPase activity
DKC09_RS09355	COG1085	galactose-1-phosphate uridylyltransferase
DKC09_RS09365	COG2017	converts alpha-aldose to the beta-anomer
DKC09_RS09385	COG0511	ligase activity, forming carbon-carbon bonds
DKC09_RS09385	COG5016	pyruvate
DKC09_RS09395	COG0490	domain, Protein
DKC09_RS09395	COG0471	metal ion transport
DKC09_RS09400	COG0583	DNA-binding transcription factor activity
DKC09_RS09415	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
DKC09_RS09415	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
DKC09_RS09420	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DKC09_RS09435	COG3201	nicotinamide mononucleotide transporter
DKC09_RS09440	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
DKC09_RS09485	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
DKC09_RS09490	COG2885	chlorophyll binding
DKC09_RS09500	COG3064	Membrane
DKC09_RS09500	COG3064	Membrane
DKC09_RS09505	COG0848	biopolymer transport protein
DKC09_RS09510	COG0811	peptide transport
DKC09_RS09515	COG0824	Thioesterase
DKC09_RS09520	COG3790	cyd operon protein YbgE
DKC09_RS09530	COG4890	Cyd operon protein YbgT
DKC09_RS09535	COG1294	oxidase, subunit
DKC09_RS09540	COG1271	oxidase subunit
DKC09_RS09545	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
DKC09_RS09555	COG0508	dehydrogenase complex catalyzes the overall conversion of
DKC09_RS09560	COG0567	Dehydrogenase, E1 component
DKC09_RS09570	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DKC09_RS09575	COG1053	succinate dehydrogenase
DKC09_RS09580	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
DKC09_RS09585	COG2009	succinate dehydrogenase
DKC09_RS09600	COG0372	Belongs to the citrate synthase family
DKC09_RS09620	COG1984	allophanate hydrolase subunit 2
DKC09_RS09625	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
DKC09_RS09670	COG2205	protein histidine kinase activity
DKC09_RS09675	COG0745	RESPONSE REGULATOR receiver
DKC09_RS09685	COG0033	Phosphoglucomutase
DKC09_RS09695	COG0596	Alpha beta hydrolase
DKC09_RS09710	COG0735	belongs to the Fur family
DKC09_RS09715	COG0583	DNA-binding transcription factor activity
DKC09_RS09720	COG1053	succinate dehydrogenase
DKC09_RS09765	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
DKC09_RS09770	COG1940	carbohydrate kinase activity
DKC09_RS09770	COG1846	Transcriptional regulator
DKC09_RS09775	COG0647	UMP catabolic process
DKC09_RS09780	COG0367	asparagine synthase
DKC09_RS09825	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DKC09_RS09835	COG1702	phosphate starvation-inducible protein PhoH
DKC09_RS09860	COG0765	amino acid transport
DKC09_RS09865	COG0765	amino acid transport
DKC09_RS09870	COG1126	abc transporter atp-binding protein
DKC09_RS09875	COG2831	hemolysin activation secretion protein
DKC09_RS09880	COG3210	domain, Protein
DKC09_RS09885	COG2888	peptidyl-tyrosine sulfation
DKC09_RS09900	COG1466	dna polymerase III delta subunit
DKC09_RS09920	COG0799	negative regulation of ribosome biogenesis
DKC09_RS09930	COG0768	penicillin binding
DKC09_RS09935	COG0772	Belongs to the SEDS family
DKC09_RS09940	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DKC09_RS09945	COG1686	Belongs to the peptidase S11 family
DKC09_RS09960	COG0583	DNA-binding transcription factor activity
DKC09_RS09970	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DKC09_RS09975	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DKC09_RS09995	COG3069	C4-dicarboxylate transmembrane transporter activity
DKC09_RS10000	COG3719	Belongs to the RNase T2 family
DKC09_RS10005	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DKC09_RS10025	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
DKC09_RS10030	COG0583	DNA-binding transcription factor activity
DKC09_RS10035	COG3969	phosphoadenosine phosphosulfate
DKC09_RS10040	COG1475	DNA binding
DKC09_RS10045	COG0436	Aminotransferase
DKC09_RS10070	COG1129	ABC transporter
DKC09_RS10075	COG1172	Belongs to the binding-protein-dependent transport system permease family
DKC09_RS10080	COG1172	Belongs to the binding-protein-dependent transport system permease family
DKC09_RS10090	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DKC09_RS10105	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
DKC09_RS10115	COG0402	S-adenosylhomocysteine deaminase activity
DKC09_RS10125	COG0483	inositol monophosphate 1-phosphatase activity
DKC09_RS10160	COG1172	Belongs to the binding-protein-dependent transport system permease family
DKC09_RS10165	COG1129	ABC transporter
DKC09_RS10170	COG0371	Dehydrogenase
DKC09_RS10185	COG2879	small protein
DKC09_RS10190	COG1966	Carbon starvation protein
DKC09_RS10200	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS10205	COG1535	isochorismatase
DKC09_RS10205	COG3433	isochorismatase activity
DKC09_RS10210	COG1021	2,3-dihydroxybenzoate-AMP ligase
DKC09_RS10215	COG1169	isochorismate synthase
DKC09_RS10220	COG4592	Periplasmic binding protein
DKC09_RS10230	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DKC09_RS10235	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DKC09_RS10240	COG1120	ATPase activity
DKC09_RS10245	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
DKC09_RS10245	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
DKC09_RS10250	COG3251	PFAM MbtH domain protein
DKC09_RS10255	COG2382	esterase
DKC09_RS10260	COG4771	TonB-dependent receptor
DKC09_RS10265	COG2977	Belongs to the P-Pant transferase superfamily
DKC09_RS10270	COG3958	Transketolase
DKC09_RS10275	COG3959	Transketolase, thiamine diphosphate binding domain
DKC09_RS10285	COG2390	Transcriptional regulator
DKC09_RS10290	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DKC09_RS10295	COG1879	ABC-type sugar transport system periplasmic component
DKC09_RS10305	COG1129	ABC transporter
DKC09_RS10310	COG1172	Belongs to the binding-protein-dependent transport system permease family
DKC09_RS10320	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS10330	COG0583	DNA-binding transcription factor activity
DKC09_RS10335	COG0668	transmembrane transport
DKC09_RS10345	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DKC09_RS10375	COG0747	negative chemotaxis
DKC09_RS10380	COG0601	transmembrane transport
DKC09_RS10385	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DKC09_RS10390	COG0444	Belongs to the ABC transporter superfamily
DKC09_RS10395	COG4608	Belongs to the ABC transporter superfamily
DKC09_RS10410	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
DKC09_RS10415	COG4221	oxidoreductase activity
DKC09_RS10425	COG4215	(ABC) transporter
DKC09_RS10430	COG0765	amino acid transport
DKC09_RS10435	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
DKC09_RS10450	COG0697	spore germination
DKC09_RS10465	COG4608	Belongs to the ABC transporter superfamily
DKC09_RS10470	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DKC09_RS10490	COG3698	Phosphodiester glycosidase
DKC09_RS10535	COG2315	Protein conserved in bacteria
DKC09_RS10540	COG0778	Nitroreductase
DKC09_RS10570	COG0477	Major facilitator Superfamily
DKC09_RS10575	COG0668	transmembrane transport
DKC09_RS10580	COG1609	Transcriptional regulator
DKC09_RS10600	COG2211	Major facilitator Superfamily
DKC09_RS10605	COG1113	amino acid transport
DKC09_RS10610	COG1012	belongs to the aldehyde dehydrogenase family
DKC09_RS10615	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DKC09_RS10625	COG0531	amino acid
DKC09_RS10680	COG0667	Aldo Keto reductase
DKC09_RS10690	COG1473	amidohydrolase
DKC09_RS10720	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DKC09_RS10725	COG1120	ATPase activity
DKC09_RS10730	COG1566	PFAM secretion protein HlyD family protein
DKC09_RS10775	COG4211	Belongs to the binding-protein-dependent transport system permease family
DKC09_RS10780	COG1129	ABC transporter
DKC09_RS10795	COG0673	inositol 2-dehydrogenase activity
DKC09_RS10825	COG3104	oligopeptide transport
DKC09_RS10830	COG1982	Orn Lys Arg decarboxylase major
DKC09_RS10835	COG0531	amino acid
DKC09_RS10840	COG3710	Transcriptional regulator
DKC09_RS10850	COG1560	Kdo2-lipid A biosynthetic process
DKC09_RS10865	COG3188	usher protein
DKC09_RS10870	COG3121	Chaperone
DKC09_RS10875	COG3539	Fimbrial protein
DKC09_RS10925	COG2501	S4 domain
DKC09_RS10935	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DKC09_RS10955	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DKC09_RS10960	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DKC09_RS10975	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
DKC09_RS10980	COG4181	ATPase activity
DKC09_RS10985	COG2755	lipolytic protein G-D-S-L family
DKC09_RS10990	COG0300	oxidoreductase activity
DKC09_RS10995	COG3118	belongs to the thioredoxin family
DKC09_RS11000	COG0390	transport system, permease component
DKC09_RS11005	COG4619	ABC transporter
DKC09_RS11010	COG0330	HflC and HflK could
DKC09_RS11015	COG1585	Membrane protein implicated in regulation of membrane protease activity
DKC09_RS11030	COG3735	TraB family
DKC09_RS11035	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DKC09_RS11050	COG2223	nitrite transmembrane transporter activity
DKC09_RS11055	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
DKC09_RS11055	COG4651	solute:proton antiporter activity
DKC09_RS11060	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DKC09_RS11100	COG2832	Protein of unknown function (DUF454)
DKC09_RS11105	COG3923	Primosomal replication protein n
DKC09_RS11115	COG5464	transposase or invertase
DKC09_RS11120	COG3264	Mechanosensitive ion channel
DKC09_RS11120	COG1196	nuclear chromosome segregation
DKC09_RS11125	COG1309	transcriptional regulator
DKC09_RS11130	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DKC09_RS11135	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DKC09_RS11150	COG0110	maltose O-acetyltransferase activity
DKC09_RS11195	COG1874	Beta-galactosidase
DKC09_RS11200	COG3867	Arabinogalactan endo-beta-1,4-galactanase
DKC09_RS11205	COG3833	ABC-type maltose transport systems, permease component
DKC09_RS11210	COG1175	transmembrane transport
DKC09_RS11215	COG2182	Extracellular solute-binding protein
DKC09_RS11225	COG4943	cyclic-guanylate-specific phosphodiesterase activity
DKC09_RS11240	COG2364	Membrane
DKC09_RS11270	COG3695	enzyme binding
DKC09_RS11275	COG3126	Type III secretion system lipoprotein chaperone (YscW)
DKC09_RS11280	COG1946	Acyl-CoA thioesterase
DKC09_RS11285	COG0004	ammonium transporteR
DKC09_RS11290	COG0347	Belongs to the P(II) protein family
DKC09_RS11295	COG1132	(ABC) transporter
DKC09_RS11300	COG1132	(ABC) transporter
DKC09_RS11305	COG1522	sequence-specific DNA binding
DKC09_RS11320	COG4533	DNA binding
DKC09_RS11330	COG0824	Thioesterase
DKC09_RS11335	COG1555	photosystem II stabilization
DKC09_RS11340	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DKC09_RS11345	COG0776	regulation of translation
DKC09_RS11350	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
DKC09_RS11380	COG0271	Belongs to the BolA IbaG family
DKC09_RS11385	COG3056	Lipoprotein
DKC09_RS11390	COG2223	nitrite transmembrane transporter activity
DKC09_RS11395	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
DKC09_RS11400	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
DKC09_RS11405	COG1845	cytochrome c oxidase, subunit III
DKC09_RS11410	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
DKC09_RS11425	COG1414	Transcriptional regulator
DKC09_RS11435	COG1053	succinate dehydrogenase
DKC09_RS11445	COG1053	succinate dehydrogenase
DKC09_RS11460	COG0673	inositol 2-dehydrogenase activity
DKC09_RS11465	COG2814	Major facilitator Superfamily
DKC09_RS11475	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DKC09_RS11500	COG0142	geranyltranstransferase activity
DKC09_RS11510	COG0667	Aldo Keto reductase
DKC09_RS11515	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
DKC09_RS11520	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
DKC09_RS11535	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DKC09_RS11535	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
DKC09_RS11545	COG4238	major outer membrane lipoprotein
DKC09_RS11565	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DKC09_RS11570	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
DKC09_RS11575	COG1862	Preprotein translocase
DKC09_RS11595	COG0450	alkyl hydroperoxide reductase
DKC09_RS11600	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DKC09_RS11615	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DKC09_RS11625	COG1228	amidohydrolase
DKC09_RS11635	COG1335	isochorismatase
DKC09_RS11640	COG0583	DNA-binding transcription factor activity
DKC09_RS11645	COG0366	Alpha amylase catalytic
DKC09_RS11670	COG0420	3'-5' exonuclease activity
DKC09_RS11675	COG0419	ATPase involved in DNA repair
DKC09_RS11680	COG1940	carbohydrate kinase activity
DKC09_RS11695	COG4126	flavin adenine dinucleotide binding
DKC09_RS11705	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
DKC09_RS11710	COG3416	Protein conserved in bacteria
DKC09_RS11720	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DKC09_RS11730	COG1785	Belongs to the alkaline phosphatase family
DKC09_RS11770	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
DKC09_RS11775	COG1335	isochorismatase
DKC09_RS11780	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DKC09_RS11785	COG0113	porphobilinogen synthase activity
DKC09_RS11790	COG1943	Transposase
DKC09_RS11800	COG2175	clavaminate synthase activity
DKC09_RS11805	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DKC09_RS11810	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
DKC09_RS11815	COG4521	taurine ABC transporter
DKC09_RS11820	COG2040	homocysteine
DKC09_RS11825	COG0833	amino acid
DKC09_RS11830	COG0531	amino acid
DKC09_RS11835	COG4303	Ethanolamine ammonia lyase large subunit
DKC09_RS11840	COG4302	ethanolamine ammonia-lyase activity
DKC09_RS11875	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DKC09_RS11885	COG0765	amino acid transport
DKC09_RS11890	COG0765	amino acid transport
DKC09_RS11905	COG3188	usher protein
DKC09_RS11930	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
DKC09_RS11940	COG3639	organic phosphonate transmembrane transporter activity
DKC09_RS11965	COG0791	NLP P60 protein
DKC09_RS12050	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DKC09_RS12055	COG0022	dehydrogenase e1 component
DKC09_RS12060	COG0508	dehydrogenase complex catalyzes the overall conversion of
DKC09_RS12065	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DKC09_RS12090	COG1070	Carbohydrate kinase
DKC09_RS12095	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS12100	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DKC09_RS12105	COG3775	system Galactitol-specific IIC component
DKC09_RS12110	COG0625	glutathione transferase activity
DKC09_RS12115	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
DKC09_RS12130	COG0579	oxidoreductase
DKC09_RS12135	COG1012	belongs to the aldehyde dehydrogenase family
DKC09_RS12140	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DKC09_RS12145	COG1113	amino acid transport
DKC09_RS12150	COG1802	Transcriptional regulator
DKC09_RS12170	COG2195	Cleaves the N-terminal amino acid of tripeptides
DKC09_RS12175	COG0454	-acetyltransferase
DKC09_RS12190	COG2991	Protein conserved in bacteria
DKC09_RS12205	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
DKC09_RS12210	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
DKC09_RS12230	COG3034	peptidoglycan biosynthetic process
DKC09_RS12235	COG0121	glutamine amidotransferase
DKC09_RS12245	COG1960	acyl-CoA dehydrogenase activity
DKC09_RS12250	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
DKC09_RS12265	COG0583	DNA-binding transcription factor activity
DKC09_RS12285	COG2226	methyltransferase
DKC09_RS12295	COG1388	LysM domain
DKC09_RS12295	COG0741	lytic transglycosylase activity
DKC09_RS12300	COG2226	methyltransferase
DKC09_RS12310	COG2814	Major facilitator Superfamily
DKC09_RS12315	COG0583	DNA-binding transcription factor activity
DKC09_RS12320	COG0656	L-ascorbic acid biosynthetic process
DKC09_RS12360	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
DKC09_RS12370	COG2011	ABC-type metal ion transport system permease component
DKC09_RS12375	COG1464	Belongs to the NlpA lipoprotein family
DKC09_RS12385	COG1720	tRNA m6t6A37 methyltransferase activity
DKC09_RS12395	COG0791	NLP P60 protein
DKC09_RS12400	COG3015	lipoprotein NlpE involved in copper resistance
DKC09_RS12405	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DKC09_RS12420	COG4568	rho-dependent transcription termination
DKC09_RS12430	COG0346	lactoylglutathione lyase activity
DKC09_RS12435	COG1982	Orn Lys Arg decarboxylase major
DKC09_RS12445	COG0587	DNA-directed DNA polymerase activity
DKC09_RS12475	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
DKC09_RS12485	COG0750	zinc metalloprotease
DKC09_RS12490	COG0575	Belongs to the CDS family
DKC09_RS12530	COG0024	Methionine aminopeptidase
DKC09_RS12535	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
DKC09_RS12550	COG3835	regulator
DKC09_RS12555	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DKC09_RS12575	COG2860	membrane
DKC09_RS12595	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DKC09_RS12600	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DKC09_RS12605	COG1120	ATPase activity
DKC09_RS12610	COG4774	siderophore transport
DKC09_RS12615	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DKC09_RS12705	COG1643	Atp-dependent helicase
DKC09_RS12710	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
DKC09_RS12730	COG0617	tRNA 3'-terminal CCA addition
DKC09_RS12735	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DKC09_RS12755	COG0726	polysaccharide deacetylase
DKC09_RS12760	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
DKC09_RS12765	COG0842	Transport permease protein
DKC09_RS12770	COG1131	(ABC) transporter
DKC09_RS12775	COG0288	reversible hydration of carbon dioxide
DKC09_RS12785	COG4993	Dehydrogenase
DKC09_RS12790	COG2132	Multicopper oxidase
DKC09_RS12835	COG3064	Membrane
DKC09_RS12850	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DKC09_RS12855	COG0508	dehydrogenase complex catalyzes the overall conversion of
DKC09_RS12860	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
DKC09_RS12865	COG2186	Transcriptional regulator
DKC09_RS12870	COG1113	amino acid transport
DKC09_RS12875	COG2211	Major facilitator Superfamily
DKC09_RS12880	COG3940	Belongs to the glycosyl hydrolase 43 family
DKC09_RS12885	COG3725	Membrane protein required for beta-lactamase induction
DKC09_RS12900	COG4969	Belongs to the N-Me-Phe pilin family
DKC09_RS12905	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DKC09_RS12910	COG1459	type II secretion system
DKC09_RS12935	COG0494	nUDIX hydrolase
DKC09_RS12955	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DKC09_RS12960	COG0849	cell division
DKC09_RS12985	COG0772	Belongs to the SEDS family
DKC09_RS13000	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DKC09_RS13010	COG0768	penicillin binding
DKC09_RS13035	COG1609	Transcriptional regulator
DKC09_RS13045	COG0028	Belongs to the TPP enzyme family
DKC09_RS13090	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
DKC09_RS13095	COG0738	Major facilitator superfamily
DKC09_RS13105	COG0583	DNA-binding transcription factor activity
DKC09_RS13110	COG2271	Major facilitator Superfamily
DKC09_RS13115	COG2814	Major facilitator Superfamily
DKC09_RS13140	COG1178	ABC-type Fe3 transport system permease component
DKC09_RS13150	COG0586	Pfam SNARE associated Golgi protein
DKC09_RS13175	COG0417	DNA replication proofreading
DKC09_RS13185	COG0564	pseudouridine synthase activity
DKC09_RS13200	COG3493	citrate carrier protein
DKC09_RS13215	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
DKC09_RS13220	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
DKC09_RS13230	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
DKC09_RS13280	COG0505	Belongs to the CarA family
DKC09_RS13330	COG0511	ligase activity, forming carbon-carbon bonds
DKC09_RS13330	COG5016	pyruvate
DKC09_RS13365	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DKC09_RS13370	COG0471	metal ion transport
DKC09_RS13375	COG0471	metal ion transport
DKC09_RS13380	COG2828	Protein conserved in bacteria
DKC09_RS13385	COG0583	DNA-binding transcription factor activity
DKC09_RS13400	COG1047	Peptidyl-prolyl cis-trans
DKC09_RS13415	COG0196	riboflavin kinase activity
DKC09_RS13430	COG0583	DNA-binding transcription factor activity
DKC09_RS13445	COG0641	radical SAM
DKC09_RS13450	COG3119	arylsulfatase activity
DKC09_RS13475	COG4735	regulation of single-species biofilm formation
DKC09_RS13480	COG1584	GPR1 FUN34 yaaH family protein
DKC09_RS13485	COG0477	Major facilitator Superfamily
DKC09_RS13490	COG0521	Mo-molybdopterin cofactor biosynthetic process
DKC09_RS13495	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DKC09_RS13500	COG1115	amino acid carrier protein
DKC09_RS13510	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
DKC09_RS13520	COG0460	homoserine dehydrogenase
DKC09_RS13520	COG0527	aspartate kinase activity
DKC09_RS13530	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
DKC09_RS13545	COG0745	RESPONSE REGULATOR receiver
DKC09_RS13550	COG4452	Inner membrane protein CreD
DKC09_RS13555	COG2205	protein histidine kinase activity
DKC09_RS13560	COG0745	RESPONSE REGULATOR receiver
DKC09_RS13565	COG3045	CreA protein
DKC09_RS13570	COG3708	Transcriptional regulator
DKC09_RS13570	COG2207	Transcriptional regulator
DKC09_RS13590	COG0741	lytic transglycosylase activity
DKC09_RS13600	COG0488	(ABC) transporter
DKC09_RS13610	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DKC09_RS13615	COG0560	Phosphoserine phosphatase
DKC09_RS13625	COG3726	membrane protein affecting hemolysin expression
DKC09_RS13655	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DKC09_RS13660	COG0084	hydrolase, TatD family'
DKC09_RS13665	COG4667	esterase of the alpha-beta hydrolase superfamily
DKC09_RS13675	COG2823	Periplasmic or secreted lipoprotein
DKC09_RS13685	COG1011	Hydrolase
DKC09_RS13690	COG0456	acetyltransferase
DKC09_RS13695	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
DKC09_RS13725	COG3706	GGDEF domain
DKC09_RS13730	COG4114	ferric iron reductase
DKC09_RS13735	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DKC09_RS13735	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DKC09_RS13740	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DKC09_RS13745	COG2197	response regulator
DKC09_RS13750	COG2197	response regulator
DKC09_RS13765	COG2966	Psort location CytoplasmicMembrane, score
DKC09_RS13780	COG1484	DNA-dependent DNA replication
DKC09_RS13795	COG5464	transposase or invertase
DKC09_RS13805	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DKC09_RS13810	COG3716	PTS system mannose fructose sorbose family IID component
DKC09_RS13815	COG3715	PTS system
DKC09_RS13830	COG3933	PFAM sigma-54 factor interaction domain-containing protein
DKC09_RS13830	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
DKC09_RS13835	COG0456	acetyltransferase
DKC09_RS13835	COG1214	PFAM Peptidase M22, glycoprotease
DKC09_RS13845	COG1737	Transcriptional regulator
DKC09_RS13850	COG0800	Aldolase
DKC09_RS13855	COG3734	2-keto-3-deoxy-galactonokinase
DKC09_RS13860	COG4145	pantothenate transmembrane transporter activity
DKC09_RS13870	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
DKC09_RS13885	COG0531	amino acid
DKC09_RS13890	COG1012	belongs to the aldehyde dehydrogenase family
DKC09_RS13895	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DKC09_RS13925	COG1846	Transcriptional regulator
DKC09_RS13930	COG0179	Fumarylacetoacetate (FAA) hydrolase
DKC09_RS13940	COG1012	belongs to the aldehyde dehydrogenase family
DKC09_RS13945	COG3384	dioxygenase
DKC09_RS13955	COG3971	2-oxopent-4-enoate hydratase activity
DKC09_RS13975	COG2368	4-hydroxyphenylacetate
DKC09_RS13980	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DKC09_RS13985	COG1966	Carbon starvation protein
DKC09_RS13990	COG2879	small protein
DKC09_RS13995	COG0523	cobalamin synthesis protein
DKC09_RS14010	COG1012	belongs to the aldehyde dehydrogenase family
DKC09_RS14015	COG5464	transposase or invertase
DKC09_RS14020	COG2207	Transcriptional regulator
DKC09_RS14020	COG1917	Cupin 2, conserved barrel domain protein
DKC09_RS14030	COG2733	membrane
DKC09_RS14035	COG2814	Major facilitator Superfamily
DKC09_RS14045	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
DKC09_RS14050	COG1924	4 iron, 4 sulfur cluster binding
DKC09_RS14065	COG1566	PFAM secretion protein HlyD family protein
DKC09_RS14075	COG5457	Domain of unknown function (DUF1127)
DKC09_RS14080	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DKC09_RS14090	COG0583	DNA-binding transcription factor activity
DKC09_RS14095	COG2249	NAD(P)H dehydrogenase (quinone) activity
DKC09_RS14105	COG1172	Belongs to the binding-protein-dependent transport system permease family
DKC09_RS14110	COG1129	ABC transporter
DKC09_RS14115	COG1879	ABC-type sugar transport system periplasmic component
DKC09_RS14125	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DKC09_RS14130	COG1129	ABC transporter
DKC09_RS14130	COG0842	Transport permease protein
DKC09_RS14135	COG0842	Transport permease protein
DKC09_RS14175	COG2850	peptidyl-arginine hydroxylation
DKC09_RS14180	COG5002	protein histidine kinase activity
DKC09_RS14185	COG0745	RESPONSE REGULATOR receiver
DKC09_RS14190	COG1538	Outer membrane efflux protein
DKC09_RS14195	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DKC09_RS14200	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DKC09_RS14205	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DKC09_RS14215	COG3040	lipid binding
DKC09_RS14220	COG0789	Transcriptional regulator
DKC09_RS14235	COG0300	oxidoreductase activity
DKC09_RS14250	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DKC09_RS14270	COG3272	Protein of unknown function (DUF1722)
DKC09_RS14285	COG4580	involved in the transport of maltose and maltodextrins
DKC09_RS14300	COG2211	Major facilitator Superfamily
DKC09_RS14305	COG3507	Belongs to the glycosyl hydrolase 43 family
DKC09_RS14355	COG0582	viral genome integration into host DNA
DKC09_RS14360	COG0582	viral genome integration into host DNA
DKC09_RS14375	COG0288	reversible hydration of carbon dioxide
DKC09_RS14380	COG0659	secondary active sulfate transmembrane transporter activity
DKC09_RS14385	COG1064	alcohol dehydrogenase
DKC09_RS14390	COG1175	transmembrane transport
DKC09_RS14395	COG0395	ABC-type sugar transport system, permease component
DKC09_RS14400	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
DKC09_RS14405	COG3842	ATPase activity
DKC09_RS14420	COG1082	Xylose isomerase domain protein TIM barrel
DKC09_RS14430	COG3962	Belongs to the TPP enzyme family
DKC09_RS14435	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DKC09_RS14440	COG1737	Transcriptional regulator
DKC09_RS14440	COG0837	glucose binding
DKC09_RS14450	COG3718	enzyme involved in inositol metabolism
DKC09_RS14465	COG0433	COG0433 Predicted ATPase
DKC09_RS14470	COG0795	lipopolysaccharide-transporting ATPase activity
DKC09_RS14475	COG0795	lipopolysaccharide-transporting ATPase activity
DKC09_RS14490	COG2927	DNA polymerase III (CHI subunit)
DKC09_RS14495	COG0525	valine-tRNA ligase activity
DKC09_RS14500	COG4269	membrane
DKC09_RS14515	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
DKC09_RS14525	COG2731	YhcH YjgK YiaL family protein
DKC09_RS14570	COG1263	PTS System
DKC09_RS14570	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DKC09_RS14575	COG0366	Alpha amylase catalytic
DKC09_RS14585	COG0602	queuosine metabolic process
DKC09_RS14590	COG2026	Addiction module toxin, RelE StbE family
DKC09_RS14595	COG3077	Addiction module antitoxin, RelB DinJ family
DKC09_RS14600	COG3711	transcriptional antiterminator
DKC09_RS14600	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DKC09_RS14605	COG2706	6-phosphogluconolactonase activity
DKC09_RS14620	COG3964	amidohydrolase
DKC09_RS14655	COG0312	modulator of DNA gyrase
DKC09_RS14680	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
DKC09_RS14690	COG1172	Belongs to the binding-protein-dependent transport system permease family
DKC09_RS14695	COG1172	Belongs to the binding-protein-dependent transport system permease family
DKC09_RS14700	COG1129	ABC transporter
DKC09_RS14705	COG1879	ABC-type sugar transport system periplasmic component
DKC09_RS14720	COG2105	PFAM AIG2 family protein
DKC09_RS14725	COG2911	Protein conserved in bacteria
DKC09_RS14730	COG0729	surface antigen
DKC09_RS14740	COG1253	flavin adenine dinucleotide binding
DKC09_RS14765	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
DKC09_RS14780	COG1733	regulation of RNA biosynthetic process
DKC09_RS14785	COG0702	epimerase
DKC09_RS14795	COG0697	spore germination
DKC09_RS14805	COG1113	amino acid transport
DKC09_RS14810	COG0545	Peptidyl-prolyl cis-trans isomerase
DKC09_RS14815	COG3061	Opacity-associated protein A
DKC09_RS14825	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DKC09_RS14830	COG2965	DNA replication, synthesis of RNA primer
DKC09_RS14855	COG1073	alpha beta
DKC09_RS14860	COG3650	response to hydrogen peroxide
DKC09_RS14870	COG1960	acyl-CoA dehydrogenase activity
DKC09_RS14875	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DKC09_RS14880	COG0557	exoribonuclease II activity
DKC09_RS14895	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
DKC09_RS14905	COG0330	HflC and HflK could
DKC09_RS14910	COG0330	HflC and HflK could
DKC09_RS14915	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DKC09_RS14940	COG0802	atpase or kinase
DKC09_RS14945	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
DKC09_RS14945	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DKC09_RS14950	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DKC09_RS14975	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DKC09_RS15000	COG1511	domain protein
DKC09_RS15000	COG3264	Mechanosensitive ion channel
DKC09_RS15015	COG1053	succinate dehydrogenase
DKC09_RS15020	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
DKC09_RS15040	COG2076	Multidrug Resistance protein
DKC09_RS15050	COG5510	response to toxic substance
DKC09_RS15060	COG1509	lysine 2,3-aminomutase activity
DKC09_RS15065	COG0745	RESPONSE REGULATOR receiver
DKC09_RS15070	COG3539	Fimbrial protein
DKC09_RS15075	COG3121	Chaperone
DKC09_RS15080	COG3188	usher protein
DKC09_RS15125	COG0531	amino acid
DKC09_RS15130	COG3030	protein affecting phage T7 exclusion by the F plasmid
DKC09_RS15140	COG1027	Aspartate ammonia-lyase
DKC09_RS15145	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
DKC09_RS15160	COG1309	transcriptional regulator
DKC09_RS15185	COG0457	Tetratricopeptide repeat
DKC09_RS15190	COG0726	polysaccharide deacetylase
DKC09_RS15190	COG1649	PFAM Uncharacterised BCR, COG1649
DKC09_RS15195	COG1215	transferase activity, transferring glycosyl groups
DKC09_RS15215	COG0861	Integral membrane protein TerC family
DKC09_RS15245	COG1486	melibiose metabolic process
DKC09_RS15250	COG2169	Transcriptional regulator
DKC09_RS15265	COG2824	Alkylphosphonate utilization operon protein PhnA
DKC09_RS15270	COG2764	glyoxalase bleomycin resistance protein dioxygenase
DKC09_RS15275	COG2188	Transcriptional regulator
DKC09_RS15280	COG3624	Phosphonate C-P lyase system protein PhnG
DKC09_RS15285	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
DKC09_RS15290	COG3626	phosphonate metabolism
DKC09_RS15295	COG3627	carbon phosphorus lyase activity
DKC09_RS15300	COG4107	phosphonate C-P lyase system protein PhnK
DKC09_RS15305	COG4778	phosphonate C-P lyase system protein PhnL
DKC09_RS15310	COG3454	Phosphonate metabolism
DKC09_RS15320	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
DKC09_RS15330	COG4191	Histidine kinase
DKC09_RS15330	COG0784	Response regulator, receiver
DKC09_RS15335	COG1129	ABC transporter
DKC09_RS15340	COG1172	Belongs to the binding-protein-dependent transport system permease family
DKC09_RS15365	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
DKC09_RS15370	COG1301	dicarboxylic acid transport
DKC09_RS15390	COG3162	membrane
DKC09_RS15415	COG3121	Chaperone
DKC09_RS15420	COG3539	Fimbrial protein
DKC09_RS15425	COG1346	cytolysis
DKC09_RS15430	COG1380	Effector of murein hydrolase LrgA
DKC09_RS15435	COG0583	DNA-binding transcription factor activity
DKC09_RS15440	COG0025	NhaP-type Na H and K H
DKC09_RS15445	COG2252	PERMEase
DKC09_RS15450	COG0625	glutathione transferase activity
DKC09_RS15455	COG0789	Transcriptional regulator
DKC09_RS15465	COG4943	cyclic-guanylate-specific phosphodiesterase activity
DKC09_RS15495	COG3842	ATPase activity
DKC09_RS15500	COG1234	tRNA 3'-trailer cleavage
DKC09_RS15505	COG1609	Transcriptional regulator
DKC09_RS15510	COG0483	inositol monophosphate 1-phosphatase activity
DKC09_RS15525	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DKC09_RS15545	COG4771	TonB-dependent receptor
DKC09_RS15550	COG0741	lytic transglycosylase activity
DKC09_RS15570	COG2315	Protein conserved in bacteria
DKC09_RS15575	COG0432	Pfam Uncharacterised protein family UPF0047
DKC09_RS15590	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DKC09_RS15595	COG0305	Participates in initiation and elongation during chromosome replication
DKC09_RS15610	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DKC09_RS15620	COG0735	belongs to the Fur family
DKC09_RS15625	COG3237	CsbD-like
DKC09_RS15630	COG0534	Mate efflux family protein
DKC09_RS15640	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
DKC09_RS15720	COG0251	oxidation-reduction process
DKC09_RS15730	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
DKC09_RS15745	COG0527	aspartate kinase activity
DKC09_RS15800	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
DKC09_RS15830	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
DKC09_RS15840	COG0456	acetyltransferase
DKC09_RS15880	COG0151	Belongs to the GarS family
DKC09_RS15890	COG4191	Histidine kinase
DKC09_RS15900	COG3678	ATP-independent chaperone mediated protein folding
DKC09_RS15935	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
DKC09_RS15950	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
DKC09_RS15955	COG2104	thiamine diphosphate biosynthetic process
DKC09_RS15965	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
DKC09_RS15970	COG3706	GGDEF domain
DKC09_RS15980	COG1447	Phosphotransferase system cellobiose-specific component IIA
DKC09_RS15985	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
DKC09_RS16025	COG0250	Participates in transcription elongation, termination and antitermination
DKC09_RS16075	COG0812	UDP-N-acetylmuramate dehydrogenase activity
DKC09_RS16105	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
DKC09_RS16115	COG1739	Uncharacterized protein family UPF0029
DKC09_RS16160	COG0805	protein transport
DKC09_RS16180	COG3165	ubiquinone biosynthetic process from chorismate
DKC09_RS16210	COG0583	DNA-binding transcription factor activity
DKC09_RS16215	COG0697	spore germination
DKC09_RS16220	COG0561	phosphatase activity
DKC09_RS16225	COG2267	carboxylic ester hydrolase activity
DKC09_RS16230	COG1280	lysine exporter protein (LysE YggA)
DKC09_RS16240	COG1280	lysine exporter protein (LysE YggA)
DKC09_RS16270	COG0210	DNA helicase
DKC09_RS16275	COG1011	Hydrolase
DKC09_RS16305	COG3072	Adenylate cyclase
DKC09_RS16320	COG2959	enzyme of heme biosynthesis
DKC09_RS16325	COG3071	HemY protein
DKC09_RS16370	COG2244	polysaccharide biosynthetic process
DKC09_RS16375	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
DKC09_RS16380	COG0456	acetyltransferase
DKC09_RS16385	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DKC09_RS16390	COG1088	dTDP-glucose 4,6-dehydratase activity
DKC09_RS16395	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
DKC09_RS16400	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
DKC09_RS16410	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DKC09_RS16415	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
DKC09_RS16420	COG3118	belongs to the thioredoxin family
DKC09_RS16445	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DKC09_RS16450	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
DKC09_RS16460	COG0583	DNA-binding transcription factor activity
DKC09_RS16465	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DKC09_RS16480	COG3978	acetolactate synthase activity
DKC09_RS16500	COG3085	chromosome segregation
DKC09_RS16575	COG0583	DNA-binding transcription factor activity
DKC09_RS16600	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
DKC09_RS16615	COG3443	Belongs to the bacterial solute-binding protein 9 family
DKC09_RS16620	COG2207	Transcriptional regulator
DKC09_RS16630	COG0371	Dehydrogenase
DKC09_RS16645	COG0583	DNA-binding transcription factor activity
DKC09_RS16650	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DKC09_RS16655	COG0527	aspartate kinase activity
DKC09_RS16655	COG0460	homoserine dehydrogenase
DKC09_RS16660	COG0626	cystathionine gamma-synthase activity
DKC09_RS16675	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DKC09_RS16680	COG1609	Transcriptional regulator
DKC09_RS16685	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DKC09_RS16700	COG1575	Belongs to the MenA family. Type 1 subfamily
DKC09_RS16720	COG3678	ATP-independent chaperone mediated protein folding
DKC09_RS16725	COG0745	RESPONSE REGULATOR receiver
DKC09_RS16730	COG2205	protein histidine kinase activity
DKC09_RS16735	COG2258	MOSC domain
DKC09_RS16740	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DKC09_RS16785	COG1129	ABC transporter
DKC09_RS16790	COG1172	Belongs to the binding-protein-dependent transport system permease family
DKC09_RS16795	COG1172	Belongs to the binding-protein-dependent transport system permease family
DKC09_RS16800	COG1454	alcohol dehydrogenase
DKC09_RS16820	COG1621	beta-fructofuranosidase activity
DKC09_RS16825	COG2211	Major facilitator Superfamily
DKC09_RS16830	COG1609	Transcriptional regulator
DKC09_RS16835	COG2211	Major facilitator Superfamily
DKC09_RS16895	COG0205	6-phosphofructokinase activity
DKC09_RS16915	COG0243	molybdopterin cofactor binding
DKC09_RS16915	COG3383	formate dehydrogenase (NAD+) activity
DKC09_RS16920	COG0243	molybdopterin cofactor binding
DKC09_RS16920	COG3383	formate dehydrogenase (NAD+) activity
DKC09_RS16925	COG0437	4 iron, 4 sulfur cluster binding
DKC09_RS16930	COG2864	formate dehydrogenase
DKC09_RS16940	COG0657	acetylesterase activity
DKC09_RS16945	COG0456	acetyltransferase
DKC09_RS16960	COG1011	Hydrolase
DKC09_RS16965	COG2271	Major facilitator Superfamily
DKC09_RS16970	COG1082	Xylose isomerase domain protein TIM barrel
DKC09_RS16975	COG2188	Transcriptional regulator
DKC09_RS16995	COG3852	Histidine kinase
DKC09_RS17025	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DKC09_RS17025	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DKC09_RS17040	COG0204	Acyl-transferase
DKC09_RS17050	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
DKC09_RS17055	COG3084	Protein conserved in bacteria
DKC09_RS17065	COG1763	Mo-molybdopterin cofactor biosynthetic process
DKC09_RS17090	COG2186	Transcriptional regulator
DKC09_RS17095	COG0477	Major facilitator Superfamily
DKC09_RS17100	COG1609	Transcriptional regulator
DKC09_RS17105	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DKC09_RS17115	COG1172	Belongs to the binding-protein-dependent transport system permease family
DKC09_RS17120	COG1129	ABC transporter
DKC09_RS17150	COG1522	sequence-specific DNA binding
DKC09_RS17155	COG0716	FMN binding
DKC09_RS17170	COG3312	ion transport
DKC09_RS17220	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
DKC09_RS17225	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
DKC09_RS17230	COG0573	inorganic phosphate transmembrane transporter activity
DKC09_RS17235	COG0581	inorganic phosphate transmembrane transporter activity
DKC09_RS17240	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DKC09_RS17245	COG0704	Plays a role in the regulation of phosphate uptake
DKC09_RS17265	COG2382	esterase
DKC09_RS17270	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DKC09_RS17280	COG2252	PERMEase
DKC09_RS17285	COG0431	NADPH-dependent FMN reductase
DKC09_RS17290	COG2091	lysine biosynthetic process via aminoadipic acid
DKC09_RS17320	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
DKC09_RS17350	COG0187	DNA topoisomerase II activity
DKC09_RS17355	COG0561	phosphatase activity
DKC09_RS17370	COG0823	Involved in the tonB-independent uptake of proteins
DKC09_RS17375	COG5645	(Lipo)protein
DKC09_RS17395	COG2188	Transcriptional regulator
DKC09_RS17410	COG2149	membrane
DKC09_RS17430	COG2610	gluconate transmembrane transporter activity
DKC09_RS17435	COG0583	DNA-binding transcription factor activity
DKC09_RS17440	COG2814	Major facilitator Superfamily
DKC09_RS17470	COG0028	Belongs to the TPP enzyme family
DKC09_RS17475	COG0440	acetolactate synthase activity
DKC09_RS17480	COG2197	response regulator
DKC09_RS17490	COG2271	Major facilitator Superfamily
DKC09_RS17530	COG2188	Transcriptional regulator
DKC09_RS17560	COG4580	involved in the transport of maltose and maltodextrins
DKC09_RS17565	COG1447	Phosphotransferase system cellobiose-specific component IIA
DKC09_RS17570	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DKC09_RS17570	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DKC09_RS17580	COG1609	Transcriptional regulator
DKC09_RS17590	COG3384	dioxygenase
DKC09_RS17595	COG0583	DNA-binding transcription factor activity
DKC09_RS17600	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
DKC09_RS17605	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
DKC09_RS17610	COG2828	Protein conserved in bacteria
DKC09_RS17625	COG0697	spore germination
DKC09_RS17630	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DKC09_RS17630	COG1263	PTS System
DKC09_RS17640	COG2814	Major facilitator Superfamily
DKC09_RS17650	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DKC09_RS17655	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DKC09_RS17680	COG1309	transcriptional regulator
DKC09_RS17690	COG0583	DNA-binding transcription factor activity
DKC09_RS17715	COG1464	Belongs to the NlpA lipoprotein family
DKC09_RS17730	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
DKC09_RS17740	COG1064	alcohol dehydrogenase
DKC09_RS17785	COG1486	melibiose metabolic process
DKC09_RS17790	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DKC09_RS17790	COG1263	PTS System
DKC09_RS17795	COG2982	Protein involved in outer membrane biogenesis
DKC09_RS17800	COG2233	PERMEase
DKC09_RS17805	COG0786	glutamate:sodium symporter activity
DKC09_RS17820	COG3074	FtsZ-dependent cytokinesis
DKC09_RS17825	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
DKC09_RS17850	COG3152	Membrane
DKC09_RS17860	COG1494	fructose-1,6-bisphosphatase
DKC09_RS17865	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DKC09_RS17870	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DKC09_RS17875	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DKC09_RS17895	COG2860	membrane
DKC09_RS17905	COG1561	YicC-like family, N-terminal region
DKC09_RS17935	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DKC09_RS17970	COG1519	Transferase
DKC09_RS17975	COG1216	Glycosyl transferase, family 2
DKC09_RS17980	COG0438	transferase activity, transferring glycosyl groups
DKC09_RS17990	COG0859	PFAM glycosyl transferase family 9
DKC09_RS18015	COG0859	PFAM glycosyl transferase family 9
DKC09_RS18040	COG0463	Glycosyl transferase, family 2
DKC09_RS18045	COG2861	carbohydrate metabolic process
DKC09_RS18050	COG4942	peptidase
DKC09_RS18060	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DKC09_RS18065	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DKC09_RS18085	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
DKC09_RS18095	COG2186	Transcriptional regulator
DKC09_RS18115	COG3722	fumarate hydratase activity
DKC09_RS18135	COG1566	PFAM secretion protein HlyD family protein
DKC09_RS18140	COG0625	glutathione transferase activity
DKC09_RS18150	COG3276	selenocysteine insertion sequence binding
DKC09_RS18160	COG2211	Major facilitator Superfamily
DKC09_RS18170	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DKC09_RS18175	COG3977	Valine--pyruvate aminotransferase
DKC09_RS18180	COG0366	Alpha amylase catalytic
DKC09_RS18190	COG2992	FlgJ-related protein
DKC09_RS18195	COG2207	Transcriptional regulator
DKC09_RS18195	COG1609	Transcriptional regulator
DKC09_RS18200	COG4214	carbohydrate transport
DKC09_RS18210	COG4213	ABC transporter substrate-binding protein
DKC09_RS18230	COG4682	membrane
DKC09_RS18235	COG4682	membrane
DKC09_RS18240	COG3274	enterobacterial common antigen metabolic process
DKC09_RS18270	COG1278	Cold shock
DKC09_RS18275	COG2944	sequence-specific DNA binding
DKC09_RS18280	COG2814	Major facilitator Superfamily
DKC09_RS18310	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DKC09_RS18320	COG1609	Transcriptional regulator
DKC09_RS18325	COG2885	chlorophyll binding
DKC09_RS18330	COG0243	molybdopterin cofactor binding
DKC09_RS18335	COG0456	acetyltransferase
DKC09_RS18340	COG2818	Glycosylase
DKC09_RS18345	COG5571	outer membrane autotransporter
DKC09_RS18350	COG2223	nitrite transmembrane transporter activity
DKC09_RS18395	COG0747	negative chemotaxis
DKC09_RS18400	COG0601	transmembrane transport
DKC09_RS18405	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DKC09_RS18410	COG0444	Belongs to the ABC transporter superfamily
DKC09_RS18415	COG4608	Belongs to the ABC transporter superfamily
DKC09_RS18430	COG2894	cell division
DKC09_RS18440	COG1215	transferase activity, transferring glycosyl groups
DKC09_RS18445	COG0457	Tetratricopeptide repeat
DKC09_RS18460	COG2194	sulfuric ester hydrolase activity
DKC09_RS18490	COG1215	transferase activity, transferring glycosyl groups
DKC09_RS18495	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
DKC09_RS18500	COG0457	Tetratricopeptide repeat
DKC09_RS18500	COG3118	belongs to the thioredoxin family
DKC09_RS18505	COG2199	diguanylate cyclase activity
DKC09_RS18505	COG2200	EAL domain
DKC09_RS18520	COG0612	Peptidase, M16
DKC09_RS18535	COG2982	Protein involved in outer membrane biogenesis
DKC09_RS18540	COG0477	Major facilitator Superfamily
DKC09_RS18545	COG1295	ribonuclease BN
DKC09_RS18550	COG0583	DNA-binding transcription factor activity
DKC09_RS18555	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS18560	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DKC09_RS18570	COG1454	alcohol dehydrogenase
DKC09_RS18580	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DKC09_RS18585	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DKC09_RS18590	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
DKC09_RS18595	COG0671	phosphoesterase, PA-phosphatase related
DKC09_RS18615	COG0589	response to stress
DKC09_RS18625	COG0306	phosphate transporter
DKC09_RS18630	COG2081	HI0933 family
DKC09_RS18635	COG2204	response regulator
DKC09_RS18640	COG3964	amidohydrolase
DKC09_RS18645	COG0471	metal ion transport
DKC09_RS18650	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
DKC09_RS18655	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DKC09_RS18665	COG2239	Acts as a magnesium transporter
DKC09_RS18675	COG1124	(ABC) transporter
DKC09_RS18685	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DKC09_RS18690	COG0601	transmembrane transport
DKC09_RS18695	COG0747	negative chemotaxis
DKC09_RS18705	COG3479	Phenolic acid decarboxylase
DKC09_RS18745	COG0628	permease
DKC09_RS18750	COG2091	lysine biosynthetic process via aminoadipic acid
DKC09_RS18755	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DKC09_RS18760	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS18770	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DKC09_RS18795	COG0463	Glycosyl transferase, family 2
DKC09_RS18815	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DKC09_RS18845	COG0477	Major facilitator Superfamily
DKC09_RS18855	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
DKC09_RS18870	COG3714	YhhN family
DKC09_RS18880	COG3776	membrane
DKC09_RS18885	COG0742	ribosomal rna small subunit methyltransferase
DKC09_RS18890	COG0552	protein localization to endoplasmic reticulum
DKC09_RS18895	COG2884	Cell division ATP-binding protein ftsE
DKC09_RS18900	COG2177	Part of the ABC transporter FtsEX involved in
DKC09_RS18915	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DKC09_RS18930	COG0683	leucine binding
DKC09_RS18945	COG0683	leucine binding
DKC09_RS18950	COG0559	Belongs to the binding-protein-dependent transport system permease family
DKC09_RS18990	COG0584	glycerophosphoryl diester phosphodiesterase
DKC09_RS19000	COG0405	Gamma-glutamyltransferase
DKC09_RS19005	COG1247	-acetyltransferase
DKC09_RS19015	COG0673	inositol 2-dehydrogenase activity
DKC09_RS19020	COG1741	Belongs to the pirin family
DKC09_RS19025	COG1609	Transcriptional regulator
DKC09_RS19030	COG3265	gluconokinase activity
DKC09_RS19035	COG2610	gluconate transmembrane transporter activity
DKC09_RS19045	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DKC09_RS19070	COG0058	SHG alpha-glucan phosphorylase activity
DKC09_RS19075	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DKC09_RS19090	COG1349	DNA-binding transcription factor activity
DKC09_RS19100	COG0058	SHG alpha-glucan phosphorylase activity
DKC09_RS19105	COG1640	4-alpha-glucanotransferase
DKC09_RS19110	COG2610	gluconate transmembrane transporter activity
DKC09_RS19120	COG1040	competence protein
DKC09_RS19145	COG1918	ferrous iron import across plasma membrane
DKC09_RS19150	COG2183	response to ionizing radiation
DKC09_RS19155	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
DKC09_RS19180	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
DKC09_RS19185	COG1011	Hydrolase
DKC09_RS19195	COG0494	nUDIX hydrolase
DKC09_RS19200	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
DKC09_RS19225	COG4796	Type ii and iii secretion system protein
DKC09_RS19245	COG3266	domain, Protein
DKC09_RS19250	COG0338	D12 class N6 adenine-specific DNA methyltransferase
DKC09_RS19255	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DKC09_RS19280	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DKC09_RS19285	COG0402	S-adenosylhomocysteine deaminase activity
DKC09_RS19290	COG0738	Major facilitator superfamily
DKC09_RS19315	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
DKC09_RS19320	COG1289	transmembrane transporter activity
DKC09_RS19335	COG1765	OsmC-like protein
DKC09_RS19340	COG3954	Phosphoribulokinase
DKC09_RS19350	COG0429	hydrolase of the alpha beta-hydrolase fold
DKC09_RS19360	COG0488	(ABC) transporter
DKC09_RS19380	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
DKC09_RS19385	COG1047	Peptidyl-prolyl cis-trans
DKC09_RS19395	COG0545	Peptidyl-prolyl cis-trans isomerase
DKC09_RS19400	COG2964	Protein conserved in bacteria
DKC09_RS19455	COG0051	transcription antitermination factor activity, RNA binding
DKC09_RS19480	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DKC09_RS19495	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DKC09_RS19560	COG0201	protein transport
DKC09_RS19585	COG0202	RNA polymerase activity
DKC09_RS19600	COG0789	Transcriptional regulator
DKC09_RS19605	COG3036	rescue of stalled ribosome
DKC09_RS19635	COG0758	DNA mediated transformation
DKC09_RS19645	COG0551	DNA topoisomerase type I activity
DKC09_RS19665	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DKC09_RS19710	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DKC09_RS19715	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DKC09_RS19720	COG1309	transcriptional regulator
DKC09_RS19740	COG4145	pantothenate transmembrane transporter activity
DKC09_RS19745	COG3924	membrane
DKC09_RS19750	COG0439	Biotin carboxylase
DKC09_RS19755	COG0511	ligase activity, forming carbon-carbon bonds
DKC09_RS19785	COG2200	EAL domain
DKC09_RS19785	COG2199	diguanylate cyclase activity
DKC09_RS19795	COG1077	Cell shape determining protein MreB Mrl
DKC09_RS19800	COG1792	Involved in formation and maintenance of cell shape
DKC09_RS19805	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
DKC09_RS19815	COG1530	ribonuclease E activity
DKC09_RS19820	COG3164	Protein of unknown function
DKC09_RS19825	COG0312	modulator of DNA gyrase
DKC09_RS19830	COG0583	DNA-binding transcription factor activity
DKC09_RS19845	COG1289	transmembrane transporter activity
DKC09_RS19850	COG2732	(Barnase) inhibitor
DKC09_RS19875	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DKC09_RS19880	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DKC09_RS19885	COG3105	Protein conserved in bacteria
DKC09_RS19890	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
DKC09_RS19910	COG0625	glutathione transferase activity
DKC09_RS19915	COG2969	positive regulation of protein catabolic process
DKC09_RS19925	COG0493	'glutamate synthase
DKC09_RS19930	COG0070	glutamate synthase
DKC09_RS19930	COG0069	glutamate synthase activity
DKC09_RS19930	COG0067	glutamate synthase
DKC09_RS19940	COG1242	4 iron, 4 sulfur cluster binding
DKC09_RS19945	COG2271	Major facilitator Superfamily
DKC09_RS19950	COG1063	alcohol dehydrogenase
DKC09_RS19955	COG1312	Catalyzes the dehydration of D-mannonate
DKC09_RS19960	COG2198	Histidine kinase
DKC09_RS19960	COG5002	protein histidine kinase activity
DKC09_RS19960	COG0784	Response regulator, receiver
DKC09_RS19965	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
DKC09_RS19970	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DKC09_RS19975	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DKC09_RS19985	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DKC09_RS19990	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DKC09_RS19995	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
DKC09_RS20000	COG1137	ATPase activity
DKC09_RS20005	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
DKC09_RS20010	COG3117	lipopolysaccharide transmembrane transporter activity
DKC09_RS20015	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
DKC09_RS20025	COG0530	calcium, potassium:sodium antiporter activity
DKC09_RS20035	COG1127	ABC transporter
DKC09_RS20040	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
DKC09_RS20045	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
DKC09_RS20050	COG2854	intermembrane phospholipid transfer
DKC09_RS20055	COG3113	response to antibiotic
DKC09_RS20060	COG5007	Belongs to the BolA IbaG family
DKC09_RS20070	COG3423	Transcriptional regulator
DKC09_RS20075	COG0142	geranyltranstransferase activity
DKC09_RS20090	COG0697	spore germination
DKC09_RS20100	COG2027	D-alanyl-D-alanine carboxypeptidase
DKC09_RS20110	COG1534	Rna-binding protein
DKC09_RS20120	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DKC09_RS20125	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DKC09_RS20135	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
DKC09_RS20175	COG0195	Participates in both transcription termination and antitermination
DKC09_RS20225	COG0814	amino acid
DKC09_RS20250	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
DKC09_RS20295	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DKC09_RS20300	COG0826	peptidase U32
DKC09_RS20305	COG0826	peptidase U32
DKC09_RS20310	COG3154	lipid carrier protein
DKC09_RS20315	COG3153	acetyltransferase
DKC09_RS20330	COG0693	protein deglycase activity
DKC09_RS20335	COG0702	epimerase
DKC09_RS20340	COG0701	Predicted permease
DKC09_RS20345	COG2823	Periplasmic or secreted lipoprotein
DKC09_RS20365	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DKC09_RS20370	COG2721	sulfolactate sulfo-lyase activity
DKC09_RS20380	COG2084	Dehydrogenase
DKC09_RS20400	COG0668	transmembrane transport
DKC09_RS20410	COG1741	Belongs to the pirin family
DKC09_RS20415	COG0583	DNA-binding transcription factor activity
DKC09_RS20420	COG3152	Membrane
DKC09_RS20425	COG0435	Glutathione S-transferase
DKC09_RS20430	COG2259	Doxx family
DKC09_RS20440	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
DKC09_RS20445	COG4575	ribosome binding
DKC09_RS20450	COG1422	Protein of unknown function (DUF1090)
DKC09_RS20460	COG0586	Pfam SNARE associated Golgi protein
DKC09_RS20470	COG2186	Transcriptional regulator
DKC09_RS20475	COG2271	Major facilitator Superfamily
DKC09_RS20485	COG2721	sulfolactate sulfo-lyase activity
DKC09_RS20500	COG0861	Integral membrane protein TerC family
DKC09_RS20505	COG0673	inositol 2-dehydrogenase activity
DKC09_RS20510	COG1451	nucleotide metabolic process
DKC09_RS20530	COG1902	pentaerythritol trinitrate reductase activity
DKC09_RS20530	COG0446	pyridine nucleotide-disulphide oxidoreductase
DKC09_RS20585	COG1695	Transcriptional regulator
DKC09_RS20590	COG2375	cellular response to nickel ion
DKC09_RS20605	COG1461	Dihydroxyacetone kinase
DKC09_RS20610	COG2376	Dihydroxyacetone kinase
DKC09_RS20685	COG3247	response to pH
DKC09_RS20695	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DKC09_RS20695	COG2198	Histidine kinase
DKC09_RS20695	COG2205	protein histidine kinase activity
DKC09_RS20695	COG0784	Response regulator, receiver
DKC09_RS20700	COG2197	response regulator
DKC09_RS20730	COG4974	Belongs to the 'phage' integrase family
DKC09_RS20790	COG4695	Portal protein
DKC09_RS20935	COG0582	viral genome integration into host DNA
DKC09_RS20980	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
DKC09_RS21030	COG4695	Portal protein
DKC09_RS21210	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DKC09_RS21215	COG0358	DNA primase activity
DKC09_RS21220	COG0828	Belongs to the bacterial ribosomal protein bS21 family
DKC09_RS21285	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DKC09_RS21300	COG4991	sh3 domain protein
DKC09_RS21305	COG3025	triphosphatase activity
DKC09_RS21330	COG2960	long-chain fatty acid transporting porin activity
DKC09_RS21345	COG3384	dioxygenase
DKC09_RS21350	COG0754	glutathionylspermidine amidase activity
DKC09_RS21360	COG1538	Outer membrane efflux protein
DKC09_RS21365	COG0494	nUDIX hydrolase
DKC09_RS21370	COG3151	Protein conserved in bacteria
DKC09_RS21375	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
DKC09_RS21380	COG3150	esterase
DKC09_RS21390	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
DKC09_RS21395	COG2249	NAD(P)H dehydrogenase (quinone) activity
DKC09_RS21400	COG0642	Histidine kinase
DKC09_RS21410	COG3111	PFAM Bacterial OB fold (BOF) protein
DKC09_RS21415	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
DKC09_RS21425	COG0204	Acyl-transferase
DKC09_RS21430	COG2132	Multicopper oxidase
DKC09_RS21435	COG1032	radical SAM domain protein
DKC09_RS21440	COG0656	L-ascorbic acid biosynthetic process
DKC09_RS21445	COG1979	alcohol dehydrogenase
DKC09_RS21450	COG2207	Transcriptional regulator
DKC09_RS21455	COG0586	Pfam SNARE associated Golgi protein
DKC09_RS21460	COG0626	cystathionine gamma-synthase activity
DKC09_RS21475	COG0848	biopolymer transport protein
DKC09_RS21490	COG0625	glutathione transferase activity
DKC09_RS21500	COG0754	glutathionylspermidine amidase activity
DKC09_RS21505	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DKC09_RS21525	COG0583	DNA-binding transcription factor activity
DKC09_RS21530	COG0626	cystathionine gamma-synthase activity
DKC09_RS21550	COG1811	Na channel or pump
DKC09_RS21560	COG1982	Orn Lys Arg decarboxylase major
DKC09_RS21565	COG2211	Major facilitator Superfamily
DKC09_RS21580	COG1194	a g-specific adenine glycosylase
DKC09_RS21590	COG3171	Protein conserved in bacteria
DKC09_RS21610	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
DKC09_RS21615	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
DKC09_RS21620	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DKC09_RS21635	COG0762	integral membrane protein
DKC09_RS21640	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DKC09_RS21645	COG2805	Type II/IV secretion system protein
DKC09_RS21650	COG2197	response regulator
DKC09_RS21665	COG0189	ligase activity
DKC09_RS21670	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DKC09_RS21675	COG2356	endonuclease I
DKC09_RS21685	COG2814	Major facilitator Superfamily
DKC09_RS21720	COG0501	Belongs to the peptidase M48B family
DKC09_RS21725	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DKC09_RS21740	COG0191	fructose-bisphosphate aldolase activity
DKC09_RS21745	COG0668	transmembrane transport
DKC09_RS21755	COG2968	Membrane
DKC09_RS21770	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DKC09_RS21775	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DKC09_RS21795	COG0006	proline dipeptidase activity
DKC09_RS21800	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DKC09_RS21805	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DKC09_RS21825	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS21830	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DKC09_RS21850	COG2723	6-phospho-beta-galactosidase activity
DKC09_RS21855	COG1737	Transcriptional regulator
DKC09_RS21865	COG1272	protein, Hemolysin III
DKC09_RS21875	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
DKC09_RS21885	COG0716	FMN binding
DKC09_RS21890	COG4974	Belongs to the 'phage' integrase family
DKC09_RS21900	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DKC09_RS21920	COG4942	peptidase
DKC09_RS21930	COG2814	Major facilitator Superfamily
DKC09_RS21935	COG0583	DNA-binding transcription factor activity
DKC09_RS21965	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
DKC09_RS21970	COG1393	Belongs to the ArsC family
DKC09_RS21985	COG1538	Outer membrane efflux protein
DKC09_RS21990	COG1289	transmembrane transporter activity
DKC09_RS22005	COG3592	Divergent 4Fe-4S mono-cluster
DKC09_RS22010	COG2388	GCN5-related N-acetyl-transferase
DKC09_RS22015	COG3539	Fimbrial protein
DKC09_RS22020	COG3539	Fimbrial protein
DKC09_RS22025	COG3539	Fimbrial protein
DKC09_RS22030	COG3188	usher protein
DKC09_RS22035	COG3121	Chaperone
DKC09_RS22040	COG3539	Fimbrial protein
DKC09_RS22050	COG4974	Belongs to the 'phage' integrase family
DKC09_RS22055	COG0582	viral genome integration into host DNA
DKC09_RS22070	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
DKC09_RS22075	COG1846	Transcriptional regulator
DKC09_RS22080	COG0697	spore germination
DKC09_RS22130	COG0667	Aldo Keto reductase
DKC09_RS22135	COG0814	amino acid
DKC09_RS22150	COG0183	Belongs to the thiolase family
DKC09_RS22160	COG0823	Involved in the tonB-independent uptake of proteins
DKC09_RS22165	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS22170	COG2814	Major facilitator Superfamily
DKC09_RS22200	COG3842	ATPase activity
DKC09_RS22205	COG0395	ABC-type sugar transport system, permease component
DKC09_RS22210	COG1175	transmembrane transport
DKC09_RS22225	COG1917	Cupin 2, conserved barrel domain protein
DKC09_RS22230	COG1794	racemase activity, acting on amino acids and derivatives
DKC09_RS22235	COG0583	DNA-binding transcription factor activity
DKC09_RS22245	COG1609	Transcriptional regulator
DKC09_RS22250	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DKC09_RS22255	COG2723	6-phospho-beta-galactosidase activity
DKC09_RS22260	COG2186	Transcriptional regulator
DKC09_RS22270	COG1609	Transcriptional regulator
DKC09_RS22290	COG0667	Aldo Keto reductase
DKC09_RS22300	COG0861	Integral membrane protein TerC family
DKC09_RS22340	COG2165	general secretion pathway protein
DKC09_RS22345	COG4795	General secretion pathway protein
DKC09_RS22355	COG4967	type IV pilus modification protein PilV
DKC09_RS22360	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
DKC09_RS22365	COG1025	Belongs to the peptidase M16 family
DKC09_RS22370	COG1074	ATP-dependent DNA helicase activity
DKC09_RS22375	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DKC09_RS22380	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
DKC09_RS22380	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
DKC09_RS22385	COG0860	N-Acetylmuramoyl-L-alanine amidase
DKC09_RS22390	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DKC09_RS22420	COG4656	Part of a membrane complex involved in electron transport
DKC09_RS22425	COG1454	alcohol dehydrogenase
DKC09_RS22425	COG1012	belongs to the aldehyde dehydrogenase family
DKC09_RS22440	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
DKC09_RS22455	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
DKC09_RS22620	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
DKC09_RS22625	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
DKC09_RS22630	COG2166	iron-sulfur cluster assembly
DKC09_RS22635	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DKC09_RS22645	COG0583	DNA-binding transcription factor activity
DKC09_RS22650	COG2363	Small membrane protein
DKC09_RS22660	COG1349	DNA-binding transcription factor activity
DKC09_RS22680	COG0738	Major facilitator superfamily
DKC09_RS22685	COG0235	Class ii aldolase
DKC09_RS22690	COG1454	alcohol dehydrogenase
DKC09_RS22705	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DKC09_RS22725	COG2011	ABC-type metal ion transport system permease component
DKC09_RS22730	COG1464	Belongs to the NlpA lipoprotein family
DKC09_RS22740	COG0477	Major facilitator Superfamily
DKC09_RS22755	COG1760	l-serine dehydratase
DKC09_RS22760	COG0814	amino acid
DKC09_RS22765	COG1611	Belongs to the LOG family
DKC09_RS22780	COG3098	single-species biofilm formation
DKC09_RS22785	COG0564	pseudouridine synthase activity
DKC09_RS22790	COG0716	FMN binding
DKC09_RS22795	COG2271	Major facilitator Superfamily
DKC09_RS22800	COG4948	Mandelate Racemase Muconate Lactonizing
DKC09_RS22805	COG4948	Mandelate Racemase Muconate Lactonizing
DKC09_RS22810	COG1929	Belongs to the glycerate kinase type-1 family
DKC09_RS22815	COG4999	Histidine kinase
DKC09_RS22815	COG2205	protein histidine kinase activity
DKC09_RS22815	COG3437	response regulator, receiver
DKC09_RS22815	COG3850	Histidine kinase
DKC09_RS22825	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DKC09_RS22830	COG3956	TIGRFAM MazG family protein
DKC09_RS22850	COG0602	queuosine metabolic process
DKC09_RS22855	COG0720	synthase
DKC09_RS22880	COG2234	aminopeptidase activity
DKC09_RS22940	COG4942	peptidase
DKC09_RS22940	COG1388	LysM domain
DKC09_RS22945	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DKC09_RS22970	COG0163	prenyltransferase activity
DKC09_RS22975	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
DKC09_RS23010	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DKC09_RS23015	COG4558	Periplasmic binding protein
DKC09_RS23020	COG3720	iron ion transport
DKC09_RS23040	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DKC09_RS23045	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DKC09_RS23050	COG1121	(ABC) transporter
DKC09_RS23055	COG0803	Belongs to the bacterial solute-binding protein 9 family
DKC09_RS23060	COG1609	Transcriptional regulator
DKC09_RS23065	COG1940	carbohydrate kinase activity
DKC09_RS23070	COG1447	Phosphotransferase system cellobiose-specific component IIA
DKC09_RS23075	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DKC09_RS23080	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DKC09_RS23085	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DKC09_RS23095	COG4580	involved in the transport of maltose and maltodextrins
DKC09_RS23105	COG2723	6-phospho-beta-galactosidase activity
DKC09_RS23115	COG0309	Hydrogenase expression formation protein (HypE)
DKC09_RS23120	COG0409	Hydrogenase expression formation protein
DKC09_RS23125	COG0298	carbon dioxide binding
DKC09_RS23130	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
DKC09_RS23150	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DKC09_RS23155	COG0651	ATP synthesis coupled electron transport
DKC09_RS23160	COG0650	Formate hydrogenlyase subunit 4
DKC09_RS23165	COG3261	NADH dehydrogenase
DKC09_RS23165	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
DKC09_RS23170	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DKC09_RS23175	COG3260	NADH ubiquinone oxidoreductase 20
DKC09_RS23185	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
DKC09_RS23195	COG2723	6-phospho-beta-galactosidase activity
DKC09_RS23200	COG1263	PTS System
DKC09_RS23200	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DKC09_RS23205	COG1609	Transcriptional regulator
DKC09_RS23210	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DKC09_RS23215	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
DKC09_RS23220	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
DKC09_RS23230	COG2814	Major facilitator Superfamily
DKC09_RS23240	COG1414	Transcriptional regulator
DKC09_RS23245	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
DKC09_RS23250	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
DKC09_RS23285	COG1349	DNA-binding transcription factor activity
DKC09_RS23290	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
DKC09_RS23295	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS23305	COG3732	PTS system glucitol sorbitol-specific
DKC09_RS23310	COG3730	PTS system glucitol sorbitol-specific
DKC09_RS23315	COG2951	lytic endotransglycosylase activity
DKC09_RS23325	COG1121	(ABC) transporter
DKC09_RS23330	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DKC09_RS23335	COG0803	Belongs to the bacterial solute-binding protein 9 family
DKC09_RS23340	COG1546	Belongs to the CinA family
DKC09_RS23365	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
DKC09_RS23395	COG2823	Periplasmic or secreted lipoprotein
DKC09_RS23400	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DKC09_RS23405	COG1238	metal cluster binding
DKC09_RS23425	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DKC09_RS23430	COG2814	Major facilitator Superfamily
DKC09_RS23435	COG1566	PFAM secretion protein HlyD family protein
DKC09_RS23440	COG1846	Transcriptional regulator
DKC09_RS23450	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
DKC09_RS23460	COG4176	ABC-type proline glycine betaine transport system permease component
DKC09_RS23475	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DKC09_RS23485	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DKC09_RS23490	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DKC09_RS23500	COG4575	ribosome binding
DKC09_RS23535	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DKC09_RS23540	COG0640	Transcriptional regulator
DKC09_RS23550	COG0583	DNA-binding transcription factor activity
DKC09_RS23555	COG3284	Transcriptional regulator
DKC09_RS23565	COG3539	Fimbrial protein
DKC09_RS23570	COG3121	Chaperone
DKC09_RS23585	COG3121	Chaperone
DKC09_RS23605	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS23615	COG0235	Class ii aldolase
DKC09_RS23625	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DKC09_RS23655	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DKC09_RS23685	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
DKC09_RS23705	COG0431	NADPH-dependent FMN reductase
DKC09_RS23720	COG2814	Major facilitator Superfamily
DKC09_RS23730	COG0477	Major facilitator Superfamily
DKC09_RS23735	COG3622	Belongs to the hyi family
DKC09_RS23760	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DKC09_RS23765	COG2207	Transcriptional regulator
DKC09_RS23765	COG3708	Transcriptional regulator
DKC09_RS23785	COG0662	Cupin 2, conserved barrel domain protein
DKC09_RS23795	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS23810	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS23815	COG2271	Major facilitator Superfamily
DKC09_RS23820	COG1063	alcohol dehydrogenase
DKC09_RS23885	COG0582	viral genome integration into host DNA
DKC09_RS23900	COG2867	negative regulation of translational initiation
DKC09_RS23915	COG0497	DNA recombination
DKC09_RS23935	COG4536	flavin adenine dinucleotide binding
DKC09_RS23940	COG4137	Cytochrome C assembly protein
DKC09_RS23945	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DKC09_RS23980	COG2885	chlorophyll binding
DKC09_RS23985	COG2199	diguanylate cyclase activity
DKC09_RS23995	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DKC09_RS24000	COG0287	Prephenate dehydrogenase
DKC09_RS24000	COG1605	Chorismate mutase
DKC09_RS24010	COG1605	Chorismate mutase
DKC09_RS24010	COG0077	Prephenate dehydratase
DKC09_RS24020	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DKC09_RS24030	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
DKC09_RS24045	COG0542	response to heat
DKC09_RS24075	COG0477	Major facilitator Superfamily
DKC09_RS24080	COG5544	Lipoprotein
DKC09_RS24085	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DKC09_RS24095	COG3148	PFAM DTW domain containing protein
DKC09_RS24100	COG3118	belongs to the thioredoxin family
DKC09_RS24105	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DKC09_RS24120	COG0513	Belongs to the DEAD box helicase family
DKC09_RS24130	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
DKC09_RS24140	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
DKC09_RS24145	COG3026	antisigma factor binding
DKC09_RS24150	COG3086	response to oxidative stress
DKC09_RS24160	COG0681	Belongs to the peptidase S26 family
DKC09_RS24180	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
DKC09_RS24190	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
DKC09_RS24195	COG1737	Transcriptional regulator
DKC09_RS24200	COG0560	Phosphoserine phosphatase
DKC09_RS24215	COG0047	phosphoribosylformylglycinamidine synthase activity
DKC09_RS24215	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DKC09_RS24220	COG2205	protein histidine kinase activity
DKC09_RS24225	COG3170	Tfp pilus assembly protein FimV
DKC09_RS24230	COG2204	response regulator
DKC09_RS24235	COG0347	Belongs to the P(II) protein family
DKC09_RS24240	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DKC09_RS24240	COG1017	nitric oxide dioxygenase activity
DKC09_RS24255	COG2259	Doxx family
DKC09_RS24280	COG4638	Rieske (2fe-2S)
DKC09_RS24285	COG0583	DNA-binding transcription factor activity
DKC09_RS24290	COG2814	Major facilitator Superfamily
DKC09_RS24295	COG3711	transcriptional antiterminator
DKC09_RS24300	COG3683	transport system, periplasmic component
DKC09_RS24305	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
DKC09_RS24330	COG0822	iron-sulfur transferase activity
DKC09_RS24350	COG0633	Ferredoxin
DKC09_RS24355	COG2975	iron-sulfur cluster assembly
DKC09_RS24380	COG2897	thiosulfate sulfurtransferase activity
DKC09_RS24385	COG2373	Large extracellular alpha-helical protein
DKC09_RS24390	COG4953	penicillin-binding protein 1C
DKC09_RS24420	COG2976	Protein conserved in bacteria
DKC09_RS24440	COG1645	bacterial-type flagellum-dependent swarming motility
DKC09_RS24450	COG0517	IMP dehydrogenase activity
DKC09_RS24450	COG0516	GMP reductase activity
DKC09_RS24475	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS24495	COG2200	EAL domain
DKC09_RS24510	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DKC09_RS24525	COG2723	6-phospho-beta-galactosidase activity
DKC09_RS24540	COG2233	PERMEase
DKC09_RS24555	COG1393	Belongs to the ArsC family
DKC09_RS24560	COG4783	chaperone-mediated protein folding
DKC09_RS24565	COG0628	permease
DKC09_RS24570	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
DKC09_RS24575	COG2716	regulation of RNA biosynthetic process
DKC09_RS24585	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
DKC09_RS24600	COG2321	neutral zinc metallopeptidase
DKC09_RS24610	COG0400	carboxylic ester hydrolase activity
DKC09_RS24625	COG1393	Belongs to the ArsC family
DKC09_RS24635	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
DKC09_RS24640	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
DKC09_RS24640	COG0493	'glutamate synthase
DKC09_RS24650	COG5342	invasion associated locus B
DKC09_RS24655	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DKC09_RS24660	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
DKC09_RS24675	COG0860	N-Acetylmuramoyl-L-alanine amidase
DKC09_RS24695	COG2837	iron assimilation
DKC09_RS24705	COG4150	thiosulfate binding
DKC09_RS24710	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
DKC09_RS24715	COG4208	sulfate ABC transporter
DKC09_RS24720	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
DKC09_RS24730	COG4319	ketosteroid isomerase
DKC09_RS24765	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
DKC09_RS24785	COG3530	Putative quorum-sensing-regulated virulence factor
DKC09_RS24790	COG0385	Bile acid
DKC09_RS24795	COG0583	DNA-binding transcription factor activity
DKC09_RS24845	COG3415	Transposase
DKC09_RS24860	COG2200	EAL domain
DKC09_RS24860	COG2199	diguanylate cyclase activity
DKC09_RS24865	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DKC09_RS24880	COG0667	Aldo Keto reductase
DKC09_RS24885	COG3961	Belongs to the TPP enzyme family
DKC09_RS24900	COG3279	Response regulator of the LytR AlgR family
DKC09_RS24905	COG3275	phosphorelay sensor kinase activity
DKC09_RS24910	COG0436	Aminotransferase
DKC09_RS24920	COG2807	transmembrane transport
DKC09_RS24925	COG0590	tRNA wobble adenosine to inosine editing
DKC09_RS24930	COG0583	DNA-binding transcription factor activity
DKC09_RS24945	COG3706	GGDEF domain
DKC09_RS24960	COG2116	formate transmembrane transporter activity
DKC09_RS24965	COG2853	Lipoprotein
DKC09_RS24975	COG3691	Protein conserved in bacteria
DKC09_RS24990	COG2062	phosphohistidine phosphatase, SixA
DKC09_RS25015	COG0730	response to heat
DKC09_RS25020	COG3101	peptidyl-lysine hydroxylation
DKC09_RS25035	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DKC09_RS25055	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DKC09_RS25065	COG0586	Pfam SNARE associated Golgi protein
DKC09_RS25075	COG0285	dihydrofolate synthase activity
DKC09_RS25080	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
DKC09_RS25085	COG1286	toxin biosynthetic process
DKC09_RS25090	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DKC09_RS25095	COG0163	prenyltransferase activity
DKC09_RS25115	COG4160	amino acid transport
DKC09_RS25120	COG4598	ABC transporter
DKC09_RS25130	COG1090	epimerase
DKC09_RS25135	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DKC09_RS25140	COG0625	glutathione transferase activity
DKC09_RS25145	COG0625	glutathione transferase activity
DKC09_RS25150	COG0622	Phosphoesterase
DKC09_RS25155	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
DKC09_RS25180	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DKC09_RS25185	COG0490	domain, Protein
DKC09_RS25185	COG0471	metal ion transport
DKC09_RS25195	COG0436	Aminotransferase
DKC09_RS25205	COG0583	DNA-binding transcription factor activity
DKC09_RS25260	COG0839	Belongs to the complex I subunit 6 family
DKC09_RS25270	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
DKC09_RS25275	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
DKC09_RS25290	COG2153	protein acetylation
DKC09_RS25295	COG1169	isochorismate synthase
DKC09_RS25345	COG0642	Histidine kinase
DKC09_RS25355	COG5464	transposase or invertase
DKC09_RS25370	COG1414	Transcriptional regulator
DKC09_RS25380	COG2271	Major facilitator Superfamily
DKC09_RS25390	COG0247	lactate metabolic process
DKC09_RS25400	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
DKC09_RS25405	COG2271	Major facilitator Superfamily
DKC09_RS25410	COG0584	glycerophosphoryl diester phosphodiesterase
DKC09_RS25415	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DKC09_RS25445	COG2205	protein histidine kinase activity
DKC09_RS25445	COG0784	Response regulator, receiver
DKC09_RS25455	COG2198	Histidine kinase
DKC09_RS25455	COG0642	Histidine kinase
DKC09_RS25470	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DKC09_RS25470	COG2169	Transcriptional regulator
DKC09_RS25475	COG3145	DNA-N1-methyladenine dioxygenase activity
DKC09_RS25480	COG4615	Cyclic peptide transporter
DKC09_RS25485	COG2239	Acts as a magnesium transporter
DKC09_RS25490	COG0659	secondary active sulfate transmembrane transporter activity
DKC09_RS25505	COG0628	permease
DKC09_RS25530	COG1349	DNA-binding transcription factor activity
DKC09_RS25535	COG0494	nUDIX hydrolase
DKC09_RS25555	COG1061	Type III restriction enzyme res subunit
DKC09_RS25560	COG1187	pseudouridine synthase activity
DKC09_RS25565	COG2814	Major facilitator Superfamily
DKC09_RS25575	COG4172	Belongs to the ABC transporter superfamily
DKC09_RS25580	COG4239	(ABC) transporter, permease
DKC09_RS25585	COG4174	ABC transporter (Permease)
DKC09_RS25590	COG4166	transmembrane transport
DKC09_RS25595	COG2200	EAL domain
DKC09_RS25600	COG0791	NLP P60 protein
DKC09_RS25605	COG0671	phosphoesterase, PA-phosphatase related
DKC09_RS25610	COG0523	cobalamin synthesis protein
DKC09_RS25615	COG0246	Mannitol dehydrogenase
DKC09_RS25620	COG1312	Catalyzes the dehydration of D-mannonate
DKC09_RS25645	COG1566	PFAM secretion protein HlyD family protein
DKC09_RS25650	COG2814	Major facilitator Superfamily
DKC09_RS25665	COG1105	Belongs to the carbohydrate kinase PfkB family
DKC09_RS25670	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
DKC09_RS25670	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DKC09_RS25670	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DKC09_RS25680	COG2855	membrane
DKC09_RS25690	COG0583	DNA-binding transcription factor activity
DKC09_RS25695	COG0833	amino acid
DKC09_RS25705	COG4771	TonB-dependent receptor
DKC09_RS25720	COG2311	Membrane
DKC09_RS25735	COG1129	ABC transporter
DKC09_RS25745	COG2949	membrane
DKC09_RS25755	COG1346	cytolysis
DKC09_RS25765	COG0583	DNA-binding transcription factor activity
DKC09_RS25785	COG0625	glutathione transferase activity
DKC09_RS25790	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
DKC09_RS25795	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DKC09_RS25800	COG3659	wide pore channel activity
DKC09_RS25815	COG2723	6-phospho-beta-galactosidase activity
DKC09_RS25820	COG2226	methyltransferase
DKC09_RS25825	COG1538	Outer membrane efflux protein
DKC09_RS25830	COG0586	Pfam SNARE associated Golgi protein
DKC09_RS25840	COG1686	Belongs to the peptidase S11 family
DKC09_RS25860	COG0277	FAD linked oxidase domain protein
DKC09_RS25865	COG1472	Belongs to the glycosyl hydrolase 3 family
DKC09_RS25870	COG1732	Glycine betaine
DKC09_RS25875	COG1174	glycine betaine transport
DKC09_RS25880	COG1125	glycine betaine transport
DKC09_RS25885	COG1174	glycine betaine transport
DKC09_RS25895	COG3275	phosphorelay sensor kinase activity
DKC09_RS25905	COG4807	Protein conserved in bacteria
DKC09_RS25925	COG5455	response to cobalt ion
DKC09_RS25930	COG0583	DNA-binding transcription factor activity
DKC09_RS25935	COG2252	PERMEase
DKC09_RS25945	COG0583	DNA-binding transcription factor activity
DKC09_RS25955	COG2015	COG2015, Alkyl sulfatase and related hydrolases
DKC09_RS25965	COG2015	COG2015, Alkyl sulfatase and related hydrolases
DKC09_RS25975	COG0351	phosphomethylpyrimidine kinase
DKC09_RS25980	COG1830	Aldolase
DKC09_RS26015	COG1070	Carbohydrate kinase
DKC09_RS26025	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DKC09_RS26035	COG0826	peptidase U32
DKC09_RS26040	COG0745	RESPONSE REGULATOR receiver
DKC09_RS26045	COG2205	protein histidine kinase activity
DKC09_RS26070	COG1301	dicarboxylic acid transport
DKC09_RS26085	COG2205	protein histidine kinase activity
DKC09_RS26090	COG0443	Heat shock 70 kDa protein
DKC09_RS26100	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
DKC09_RS26115	COG2982	Protein involved in outer membrane biogenesis
DKC09_RS26120	COG1253	flavin adenine dinucleotide binding
DKC09_RS26155	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DKC09_RS26265	COG0438	transferase activity, transferring glycosyl groups
DKC09_RS26290	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
DKC09_RS26320	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
DKC09_RS26325	COG0583	DNA-binding transcription factor activity
DKC09_RS26335	COG0531	amino acid
DKC09_RS26355	COG3604	Transcriptional regulator
DKC09_RS26360	COG2205	protein histidine kinase activity
DKC09_RS26445	COG0640	Transcriptional regulator
DKC09_RS26450	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DKC09_RS26455	COG2925	Exonuclease
DKC09_RS26470	COG1289	transmembrane transporter activity
DKC09_RS26490	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
DKC09_RS26500	COG1942	4-Oxalocrotonate Tautomerase
DKC09_RS26505	COG0583	DNA-binding transcription factor activity
DKC09_RS26510	COG0095	Lipoate-protein ligase
DKC09_RS26515	COG0477	Major facilitator Superfamily
DKC09_RS26530	COG3300	MHYT domain
DKC09_RS26530	COG5001	Diguanylate cyclase
DKC09_RS26540	COG3615	Tellurite resistance protein tehB
DKC09_RS26565	COG3706	GGDEF domain
DKC09_RS26585	COG0534	Mate efflux family protein
DKC09_RS26620	COG3423	Transcriptional regulator
DKC09_RS26665	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DKC09_RS26685	COG0604	alcohol dehydrogenase
DKC09_RS26690	COG1309	transcriptional regulator
DKC09_RS26695	COG0025	NhaP-type Na H and K H
DKC09_RS26715	COG1376	ErfK ybiS ycfS ynhG family protein
DKC09_RS26725	COG0251	oxidation-reduction process
DKC09_RS26745	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
DKC09_RS26755	COG1418	mRNA catabolic process
DKC09_RS26760	COG0270	DNA (cytosine-5-)-methyltransferase activity
DKC09_RS26765	COG3727	T/G mismatch-specific endonuclease activity
DKC09_RS26770	COG0697	spore germination
DKC09_RS26775	COG2354	Protein conserved in bacteria
DKC09_RS26780	COG3706	GGDEF domain
DKC09_RS26805	COG0366	Alpha amylase catalytic
DKC09_RS26810	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DKC09_RS26820	COG0765	amino acid transport
DKC09_RS26825	COG1126	abc transporter atp-binding protein
DKC09_RS26830	COG2197	response regulator
DKC09_RS26845	COG2197	response regulator
DKC09_RS26885	COG3012	SEC-C Motif Domain Protein
DKC09_RS26885	COG3318	Belongs to the UPF0149 family
DKC09_RS26890	COG0814	amino acid
DKC09_RS26900	COG1528	Iron-storage protein
DKC09_RS26915	COG0477	Major facilitator Superfamily
DKC09_RS26925	COG2211	Major facilitator Superfamily
DKC09_RS26925	COG2211	Major facilitator Superfamily
DKC09_RS26935	COG1528	Iron-storage protein
DKC09_RS26940	COG1879	ABC-type sugar transport system periplasmic component
DKC09_RS26950	COG1172	Belongs to the binding-protein-dependent transport system permease family
DKC09_RS26975	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
DKC09_RS26985	COG3102	Protein conserved in bacteria
DKC09_RS27005	COG3788	relative of glutathione S-transferase, MAPEG superfamily
DKC09_RS27010	COG1801	Protein of unknown function DUF72
DKC09_RS27015	COG1335	isochorismatase
DKC09_RS27025	COG0494	nUDIX hydrolase
DKC09_RS27050	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DKC09_RS27060	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
DKC09_RS27065	COG0739	heme binding
DKC09_RS27070	COG1560	Kdo2-lipid A biosynthetic process
DKC09_RS27090	COG3493	citrate carrier protein
DKC09_RS27100	COG1737	Transcriptional regulator
DKC09_RS27115	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DKC09_RS27120	COG0129	dihydroxy-acid dehydratase activity
DKC09_RS27125	COG0800	Aldolase
DKC09_RS27135	COG3141	response to X-ray
DKC09_RS27145	COG2979	Protein of unknown function (DUF533)
DKC09_RS27150	COG1770	oligopeptidase
DKC09_RS27155	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DKC09_RS27165	COG2372	response to copper ion
DKC09_RS27170	COG1276	copper resistance
DKC09_RS27185	COG2990	Protein conserved in bacteria
DKC09_RS27210	COG3008	intermembrane lipid transfer
DKC09_RS27215	COG2995	paraquat-inducible protein a
DKC09_RS27220	COG1956	GAF domain-containing protein
DKC09_RS27240	COG2814	Major facilitator Superfamily
DKC09_RS27250	COG1414	Transcriptional regulator
DKC09_RS27290	COG0768	penicillin binding
DKC09_RS27295	COG2226	methyltransferase
DKC09_RS27310	COG3716	PTS system mannose fructose sorbose family IID component
DKC09_RS27315	COG3715	PTS system
DKC09_RS27320	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DKC09_RS27320	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
DKC09_RS27325	COG1253	flavin adenine dinucleotide binding
DKC09_RS27330	COG2200	EAL domain
DKC09_RS27335	COG1760	l-serine dehydratase
DKC09_RS27355	COG0251	oxidation-reduction process
DKC09_RS27360	COG1199	ATP-dependent helicase activity
DKC09_RS27365	COG1214	PFAM Peptidase M22, glycoprotease
DKC09_RS27370	COG3065	identical protein binding
DKC09_RS27380	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
DKC09_RS27390	COG2894	cell division
DKC09_RS27405	COG0179	Fumarylacetoacetate (FAA) hydrolase
DKC09_RS27435	COG2719	SpoVR family
DKC09_RS27455	COG1619	proteins homologs of microcin C7 resistance protein MccF
DKC09_RS27465	COG4774	siderophore transport
DKC09_RS27475	COG2308	Evidence 4 Homologs of previously reported genes of
DKC09_RS27495	COG3842	ATPase activity
DKC09_RS27500	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DKC09_RS27505	COG0395	ABC-type sugar transport system, permease component
DKC09_RS27520	COG1940	carbohydrate kinase activity
DKC09_RS27535	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DKC09_RS27545	COG1174	glycine betaine transport
DKC09_RS27565	COG0583	DNA-binding transcription factor activity
DKC09_RS27570	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DKC09_RS27585	COG1882	Formate acetyltransferase
DKC09_RS27615	COG0583	DNA-binding transcription factor activity
DKC09_RS27645	COG0583	DNA-binding transcription factor activity
DKC09_RS27655	COG0564	pseudouridine synthase activity
DKC09_RS27660	COG3122	Protein conserved in bacteria
DKC09_RS27680	COG2885	chlorophyll binding
DKC09_RS27765	COG0012	GTP binding
DKC09_RS27785	COG0659	secondary active sulfate transmembrane transporter activity
DKC09_RS27820	COG2890	protein-(glutamine-N5) methyltransferase activity
DKC09_RS27840	COG0387	Pfam Sodium calcium exchanger
DKC09_RS27845	COG4572	Cation transport regulator
DKC09_RS27850	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
DKC09_RS27860	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
DKC09_RS27865	COG3707	response regulator
DKC09_RS27870	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DKC09_RS27880	COG1116	anion transmembrane transporter activity
DKC09_RS27885	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
DKC09_RS27885	COG2146	nitrite reductase [NAD(P)H] activity
DKC09_RS27890	COG0243	molybdopterin cofactor binding
DKC09_RS27895	COG4932	domain protein
DKC09_RS27900	COG2197	response regulator
DKC09_RS27905	COG3850	Histidine kinase
DKC09_RS27910	COG2223	nitrite transmembrane transporter activity
DKC09_RS27915	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
DKC09_RS27920	COG1140	nitrate reductase beta subunit
DKC09_RS27925	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
DKC09_RS27930	COG2181	nitrate reductase activity
DKC09_RS27940	COG1522	sequence-specific DNA binding
DKC09_RS27960	COG0788	formyltetrahydrofolate deformylase activity
DKC09_RS27970	COG1752	Esterase of the alpha-beta hydrolase superfamily
DKC09_RS27975	COG0745	RESPONSE REGULATOR receiver
DKC09_RS27980	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DKC09_RS27985	COG2916	Histone family protein nucleoid-structuring protein H-NS
DKC09_RS27990	COG1435	thymidine kinase activity
DKC09_RS27995	COG1454	alcohol dehydrogenase
DKC09_RS27995	COG1012	belongs to the aldehyde dehydrogenase family
DKC09_RS28005	COG2095	MarC family integral membrane protein
DKC09_RS28010	COG4166	transmembrane transport
DKC09_RS28015	COG0601	transmembrane transport
DKC09_RS28020	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DKC09_RS28025	COG0444	Belongs to the ABC transporter superfamily
DKC09_RS28035	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DKC09_RS28055	COG2353	YceI-like domain
DKC09_RS28065	COG2350	Protein conserved in bacteria
DKC09_RS28075	COG3001	Fructosamine kinase
DKC09_RS28085	COG1105	Belongs to the carbohydrate kinase PfkB family
DKC09_RS28090	COG3137	Salt-induced outer membrane protein
DKC09_RS28135	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DKC09_RS28135	COG0072	phenylalanine-tRNA ligase activity
DKC09_RS28155	COG0583	DNA-binding transcription factor activity
DKC09_RS28175	COG0386	Belongs to the glutathione peroxidase family
DKC09_RS28185	COG0791	NLP P60 protein
DKC09_RS28195	COG4256	Hemin uptake protein
DKC09_RS28200	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DKC09_RS28210	COG0574	Belongs to the PEP-utilizing enzyme family
DKC09_RS28210	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DKC09_RS28220	COG0628	permease
DKC09_RS28225	COG0247	lactate metabolic process
DKC09_RS28225	COG0277	FAD linked oxidase domain protein
DKC09_RS28230	COG2050	protein possibly involved in aromatic compounds catabolism
DKC09_RS28235	COG2261	transglycosylase associated protein
DKC09_RS28265	COG1120	ATPase activity
DKC09_RS28270	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DKC09_RS28280	COG0583	DNA-binding transcription factor activity
DKC09_RS28305	COG1304	FMN binding
DKC09_RS28315	COG0316	Belongs to the HesB IscA family
DKC09_RS28320	COG0719	Fe-S assembly protein
DKC09_RS28325	COG0396	ATPase activity
DKC09_RS28330	COG0719	Fe-S assembly protein
DKC09_RS28345	COG1376	ErfK ybiS ycfS ynhG family protein
DKC09_RS28365	COG1309	transcriptional regulator
DKC09_RS28370	COG1082	Xylose isomerase domain protein TIM barrel
DKC09_RS28370	COG3185	4-Hydroxyphenylpyruvate dioxygenase
DKC09_RS28375	COG2271	Major facilitator Superfamily
DKC09_RS28380	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
DKC09_RS28390	COG1120	ATPase activity
DKC09_RS28395	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DKC09_RS28400	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DKC09_RS28405	COG1414	Transcriptional regulator
DKC09_RS28440	COG2814	Major facilitator Superfamily
DKC09_RS28460	COG0583	DNA-binding transcription factor activity
DKC09_RS28465	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DKC09_RS28485	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DKC09_RS28490	COG1116	anion transmembrane transporter activity
DKC09_RS28495	COG4774	siderophore transport
DKC09_RS28500	COG1120	ATPase activity
DKC09_RS28505	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DKC09_RS28510	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DKC09_RS28530	COG0765	amino acid transport
DKC09_RS28535	COG1126	abc transporter atp-binding protein
DKC09_RS28560	COG1473	amidohydrolase
DKC09_RS28565	COG3383	formate dehydrogenase (NAD+) activity
DKC09_RS28570	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
DKC09_RS28585	COG1175	transmembrane transport
DKC09_RS28615	COG4133	protoheme IX ABC transporter activity
DKC09_RS28620	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DKC09_RS28625	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
DKC09_RS28640	COG1138	Cytochrome C-type biogenesis protein
DKC09_RS28645	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DKC09_RS28650	COG4235	cytochrome complex assembly
DKC09_RS28650	COG3088	subunit of a heme lyase
DKC09_RS28675	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
DKC09_RS28700	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS28705	COG2610	gluconate transmembrane transporter activity
DKC09_RS28710	COG1250	3-hydroxyacyl-CoA dehydrogenase
DKC09_RS28720	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
DKC09_RS28730	COG0583	DNA-binding transcription factor activity
DKC09_RS28760	COG2814	Major facilitator Superfamily
DKC09_RS28790	COG0277	FAD linked oxidase domain protein
DKC09_RS28795	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DKC09_RS28820	COG0402	S-adenosylhomocysteine deaminase activity
DKC09_RS28885	COG4608	Belongs to the ABC transporter superfamily
DKC09_RS28890	COG0444	Belongs to the ABC transporter superfamily
DKC09_RS28915	COG0346	lactoylglutathione lyase activity
DKC09_RS28920	COG1349	DNA-binding transcription factor activity
DKC09_RS28935	COG3321	synthase
DKC09_RS28935	COG0604	alcohol dehydrogenase
DKC09_RS28935	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS28955	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
DKC09_RS28975	COG0300	oxidoreductase activity
DKC09_RS29010	COG0307	riboflavin synthase, alpha
DKC09_RS29015	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DKC09_RS29020	COG2814	Major facilitator Superfamily
DKC09_RS29025	COG0583	DNA-binding transcription factor activity
DKC09_RS29040	COG2814	Major facilitator Superfamily
DKC09_RS29055	COG0791	NLP P60 protein
DKC09_RS29060	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
DKC09_RS29070	COG0346	lactoylglutathione lyase activity
DKC09_RS29075	COG1902	pentaerythritol trinitrate reductase activity
DKC09_RS29080	COG1309	transcriptional regulator
DKC09_RS29085	COG3313	Fe-S protein
DKC09_RS29090	COG4989	oxidoreductase activity
DKC09_RS29095	COG2032	superoxide dismutase activity
DKC09_RS29100	COG1289	transmembrane transporter activity
DKC09_RS29105	COG1566	PFAM secretion protein HlyD family protein
DKC09_RS29120	COG3706	GGDEF domain
DKC09_RS29135	COG3895	Periplasmic Protein
DKC09_RS29150	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
DKC09_RS29155	COG0625	glutathione transferase activity
DKC09_RS29170	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DKC09_RS29180	COG4659	FMN binding
DKC09_RS29215	COG2723	6-phospho-beta-galactosidase activity
DKC09_RS29225	COG0673	inositol 2-dehydrogenase activity
DKC09_RS29245	COG3038	cytochrome b561
DKC09_RS29265	COG0583	DNA-binding transcription factor activity
DKC09_RS29270	COG3485	protocatechuate 3,4-dioxygenase
DKC09_RS29275	COG3485	protocatechuate 3,4-dioxygenase
DKC09_RS29280	COG5383	Protein conserved in bacteria
DKC09_RS29285	COG2272	Belongs to the type-B carboxylesterase lipase family
DKC09_RS29295	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DKC09_RS29300	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
DKC09_RS29305	COG1275	C4-dicarboxylate transporter malic acid transport protein
DKC09_RS29310	COG0500	methyltransferase
DKC09_RS29325	COG2207	Transcriptional regulator
DKC09_RS29325	COG3708	Transcriptional regulator
DKC09_RS29330	COG3135	benzoate transporter
DKC09_RS29335	COG1396	sequence-specific DNA binding
DKC09_RS29345	COG0826	peptidase U32
DKC09_RS29365	COG1294	oxidase, subunit
DKC09_RS29370	COG1271	oxidase subunit
DKC09_RS29375	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DKC09_RS29380	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
DKC09_RS29385	COG3842	ATPase activity
DKC09_RS29390	COG1176	ABC-type spermidine putrescine transport system, permease component I
DKC09_RS29395	COG1177	transmembrane transport
DKC09_RS29400	COG1012	belongs to the aldehyde dehydrogenase family
DKC09_RS29430	COG0747	negative chemotaxis
DKC09_RS29440	COG3238	Protein conserved in bacteria
DKC09_RS29445	COG1247	-acetyltransferase
DKC09_RS29455	COG2130	NADP-dependent
DKC09_RS29465	COG3691	Protein conserved in bacteria
DKC09_RS29470	COG4772	TonB-dependent receptor
DKC09_RS29495	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
DKC09_RS29500	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
DKC09_RS29505	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DKC09_RS29510	COG1473	amidohydrolase
DKC09_RS29515	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DKC09_RS29520	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
DKC09_RS29530	COG0765	amino acid transport
DKC09_RS29535	COG1126	abc transporter atp-binding protein
DKC09_RS29545	COG0625	glutathione transferase activity
DKC09_RS29565	COG2211	Major facilitator Superfamily
DKC09_RS29575	COG4977	sequence-specific DNA binding
DKC09_RS29580	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DKC09_RS29585	COG3842	ATPase activity
DKC09_RS29590	COG1840	ABC-type Fe3 transport system, periplasmic component
DKC09_RS29595	COG1178	ABC-type Fe3 transport system permease component
DKC09_RS29600	COG2162	N-hydroxyarylamine O-acetyltransferase activity
DKC09_RS29605	COG2181	nitrate reductase activity
DKC09_RS29610	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
DKC09_RS29615	COG1140	nitrate reductase beta subunit
DKC09_RS29620	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
DKC09_RS29640	COG1414	Transcriptional regulator
DKC09_RS29645	COG4948	Mandelate Racemase Muconate Lactonizing
DKC09_RS29650	COG4829	muconolactone delta-isomerase
DKC09_RS29655	COG3485	protocatechuate 3,4-dioxygenase
DKC09_RS29680	COG0697	spore germination
DKC09_RS29685	COG3383	formate dehydrogenase (NAD+) activity
DKC09_RS29685	COG0243	molybdopterin cofactor binding
DKC09_RS29690	COG0243	molybdopterin cofactor binding
DKC09_RS29690	COG3383	formate dehydrogenase (NAD+) activity
DKC09_RS29695	COG0437	4 iron, 4 sulfur cluster binding
DKC09_RS29700	COG2864	formate dehydrogenase
DKC09_RS29715	COG2326	polyphosphate kinase activity
DKC09_RS29725	COG2814	Major facilitator Superfamily
DKC09_RS29735	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DKC09_RS29745	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DKC09_RS29755	COG0747	negative chemotaxis
DKC09_RS29760	COG1064	alcohol dehydrogenase
DKC09_RS29780	COG0488	(ABC) transporter
DKC09_RS29810	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS29815	COG3729	General stress protein
DKC09_RS29825	COG3685	Protein conserved in bacteria
DKC09_RS29830	COG0366	Alpha amylase catalytic
DKC09_RS29840	COG2323	membrane
DKC09_RS29850	COG3111	PFAM Bacterial OB fold (BOF) protein
DKC09_RS29855	COG1764	response to oxidative stress
DKC09_RS29875	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DKC09_RS29880	COG3781	membrane
DKC09_RS29885	COG0243	molybdopterin cofactor binding
DKC09_RS29890	COG0583	DNA-binding transcription factor activity
DKC09_RS29895	COG2814	Major facilitator Superfamily
DKC09_RS29900	COG1285	pathogenesis
DKC09_RS29905	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
DKC09_RS29925	COG0518	GMP synthase (glutamine-hydrolyzing) activity
DKC09_RS29925	COG0519	Catalyzes the synthesis of GMP from XMP
DKC09_RS29965	COG0596	Alpha beta hydrolase
DKC09_RS29985	COG0583	DNA-binding transcription factor activity
DKC09_RS29990	COG0076	glutamate decarboxylase activity
DKC09_RS29995	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
DKC09_RS30000	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DKC09_RS30005	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
DKC09_RS30010	COG1116	anion transmembrane transporter activity
DKC09_RS30015	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DKC09_RS30040	COG0673	inositol 2-dehydrogenase activity
DKC09_RS30050	COG1609	Transcriptional regulator
DKC09_RS30055	COG3706	GGDEF domain
DKC09_RS30065	COG0402	S-adenosylhomocysteine deaminase activity
DKC09_RS30070	COG1953	Uracil, thiamine, allantoin
DKC09_RS30105	COG0406	alpha-ribazole phosphatase activity
DKC09_RS30110	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DKC09_RS30135	COG2207	Transcriptional regulator
DKC09_RS30140	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
DKC09_RS30140	COG3264	Mechanosensitive ion channel
DKC09_RS30160	COG0583	DNA-binding transcription factor activity
DKC09_RS30175	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DKC09_RS30190	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DKC09_RS30230	COG0765	amino acid transport
DKC09_RS30240	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
DKC09_RS30250	COG2070	2-Nitropropane dioxygenase
DKC09_RS30255	COG0583	DNA-binding transcription factor activity
DKC09_RS30265	COG1902	pentaerythritol trinitrate reductase activity
DKC09_RS30270	COG4529	Protein conserved in bacteria
DKC09_RS30275	COG0477	Major facilitator Superfamily
DKC09_RS30305	COG2223	nitrite transmembrane transporter activity
DKC09_RS30335	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
DKC09_RS30345	COG3665	Urea carboxylase-associated protein
DKC09_RS30350	COG0439	Biotin carboxylase
DKC09_RS30365	COG1028	Short-chain dehydrogenase reductase Sdr
DKC09_RS30375	COG1609	Transcriptional regulator
DKC09_RS30380	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DKC09_RS30390	COG3037	sugar-specific permease SgaT UlaA
DKC09_RS30395	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DKC09_RS30405	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DKC09_RS30425	COG3264	Mechanosensitive ion channel
DKC09_RS30425	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
DKC09_RS30430	COG2067	long-chain fatty acid transport protein
DKC09_RS30445	COG3539	Fimbrial protein
DKC09_RS30480	COG0583	DNA-binding transcription factor activity
DKC09_RS30490	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DKC09_RS30505	COG1172	Belongs to the binding-protein-dependent transport system permease family
DKC09_RS30515	COG1609	Transcriptional regulator
DKC09_RS30540	COG1652	LysM domain
DKC09_RS30600	COG2801	Transposase and inactivated derivatives
DKC09_RS30605	COG1349	DNA-binding transcription factor activity
DKC09_RS30620	COG1349	DNA-binding transcription factor activity
DKC09_RS30625	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
DKC09_RS30630	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DKC09_RS30635	COG0738	Major facilitator superfamily
DKC09_RS30680	COG1929	Belongs to the glycerate kinase type-1 family
DKC09_RS30685	COG3835	regulator
DKC09_RS30705	COG2186	Transcriptional regulator
DKC09_RS30710	COG1263	PTS System
DKC09_RS30710	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DKC09_RS30720	COG2814	Major facilitator Superfamily
DKC09_RS30725	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
DKC09_RS30725	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
DKC09_RS30735	COG2819	hydrolase of the alpha beta superfamily
DKC09_RS30740	COG5001	Diguanylate cyclase
DKC09_RS30740	COG3300	MHYT domain
DKC09_RS30770	COG3121	Chaperone
DKC09_RS30775	COG3188	usher protein
DKC09_RS30790	COG1649	PFAM Uncharacterised BCR, COG1649
DKC09_RS30795	COG3550	peptidyl-serine autophosphorylation
DKC09_RS30800	COG1396	sequence-specific DNA binding
DKC09_RS30805	COG2351	hydroxyisourate hydrolase activity
DKC09_RS30810	COG3195	allantoin biosynthetic process
DKC09_RS30810	COG3648	Uricase
DKC09_RS30815	COG2233	PERMEase
DKC09_RS30845	COG2207	Transcriptional regulator
DKC09_RS30860	COG4628	conserved protein (DUF2132)
DKC09_RS30880	COG2011	ABC-type metal ion transport system permease component