locus-tag	class	description
BJF97_RS00015	COG1129	ABC transporter
BJF97_RS00020	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJF97_RS00030	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BJF97_RS00035	COG1609	Transcriptional regulator
BJF97_RS00040	COG0477	Major facilitator Superfamily
BJF97_RS00045	COG2186	Transcriptional regulator
BJF97_RS00065	COG1763	Mo-molybdopterin cofactor biosynthetic process
BJF97_RS00075	COG3084	Protein conserved in bacteria
BJF97_RS00080	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BJF97_RS00090	COG0204	Acyl-transferase
BJF97_RS00110	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BJF97_RS00120	COG3852	Histidine kinase
BJF97_RS00135	COG1011	Hydrolase
BJF97_RS00145	COG1490	D-aminoacyl-tRNA deacylase activity
BJF97_RS00150	COG0456	acetyltransferase
BJF97_RS00155	COG0657	acetylesterase activity
BJF97_RS00165	COG2864	formate dehydrogenase
BJF97_RS00170	COG0437	4 iron, 4 sulfur cluster binding
BJF97_RS00175	COG0243	molybdopterin cofactor binding
BJF97_RS00175	COG3383	formate dehydrogenase (NAD+) activity
BJF97_RS00180	COG3383	formate dehydrogenase (NAD+) activity
BJF97_RS00180	COG0243	molybdopterin cofactor binding
BJF97_RS00205	COG3716	PTS system mannose fructose sorbose family IID component
BJF97_RS00210	COG3715	PTS system
BJF97_RS00220	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
BJF97_RS00235	COG0205	6-phosphofructokinase activity
BJF97_RS00275	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
BJF97_RS00320	COG2211	Major facilitator Superfamily
BJF97_RS00325	COG0110	maltose O-acetyltransferase activity
BJF97_RS00340	COG3539	Fimbrial protein
BJF97_RS00350	COG3121	Chaperone
BJF97_RS00355	COG3188	usher protein
BJF97_RS00365	COG3539	Fimbrial protein
BJF97_RS00370	COG3539	Fimbrial protein
BJF97_RS00375	COG3121	Chaperone
BJF97_RS00390	COG0668	transmembrane transport
BJF97_RS00405	COG1609	Transcriptional regulator
BJF97_RS00410	COG2211	Major facilitator Superfamily
BJF97_RS00415	COG1621	beta-fructofuranosidase activity
BJF97_RS00425	COG3039	Transposase
BJF97_RS00445	COG1454	alcohol dehydrogenase
BJF97_RS00455	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJF97_RS00460	COG1129	ABC transporter
BJF97_RS00505	COG2258	MOSC domain
BJF97_RS00510	COG2205	protein histidine kinase activity
BJF97_RS00515	COG0745	RESPONSE REGULATOR receiver
BJF97_RS00520	COG3678	ATP-independent chaperone mediated protein folding
BJF97_RS00540	COG1575	Belongs to the MenA family. Type 1 subfamily
BJF97_RS00555	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BJF97_RS00560	COG1609	Transcriptional regulator
BJF97_RS00565	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BJF97_RS00580	COG0626	cystathionine gamma-synthase activity
BJF97_RS00585	COG0527	aspartate kinase activity
BJF97_RS00585	COG0460	homoserine dehydrogenase
BJF97_RS00590	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BJF97_RS00595	COG0583	DNA-binding transcription factor activity
BJF97_RS00605	COG1349	DNA-binding transcription factor activity
BJF97_RS00610	COG0371	Dehydrogenase
BJF97_RS00620	COG2207	Transcriptional regulator
BJF97_RS00625	COG3443	Belongs to the bacterial solute-binding protein 9 family
BJF97_RS00640	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BJF97_RS00660	COG0583	DNA-binding transcription factor activity
BJF97_RS00740	COG3085	chromosome segregation
BJF97_RS00755	COG3978	acetolactate synthase activity
BJF97_RS00760	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BJF97_RS00770	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BJF97_RS00775	COG0583	DNA-binding transcription factor activity
BJF97_RS00785	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BJF97_RS00790	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BJF97_RS00825	COG1397	ADP-ribosylglycohydrolase
BJF97_RS00845	COG3118	belongs to the thioredoxin family
BJF97_RS00850	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BJF97_RS00855	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BJF97_RS00865	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BJF97_RS00870	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
BJF97_RS00875	COG0456	acetyltransferase
BJF97_RS00880	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BJF97_RS00885	COG2244	polysaccharide biosynthetic process
BJF97_RS00930	COG3071	HemY protein
BJF97_RS00935	COG2959	enzyme of heme biosynthesis
BJF97_RS00940	COG1587	Uroporphyrinogen-III synthase
BJF97_RS00950	COG3072	Adenylate cyclase
BJF97_RS00970	COG1228	amidohydrolase
BJF97_RS00980	COG5567	small periplasmic lipoprotein
BJF97_RS01000	COG1011	Hydrolase
BJF97_RS01005	COG0210	DNA helicase
BJF97_RS01010	COG0598	Magnesium transport protein CorA
BJF97_RS01020	COG2050	protein possibly involved in aromatic compounds catabolism
BJF97_RS01035	COG1280	lysine exporter protein (LysE YggA)
BJF97_RS01045	COG1280	lysine exporter protein (LysE YggA)
BJF97_RS01050	COG2267	carboxylic ester hydrolase activity
BJF97_RS01055	COG0561	phosphatase activity
BJF97_RS01060	COG0697	spore germination
BJF97_RS01065	COG0583	DNA-binding transcription factor activity
BJF97_RS01080	COG0412	Dienelactone hydrolase
BJF97_RS01100	COG3165	ubiquinone biosynthetic process from chorismate
BJF97_RS01110	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BJF97_RS01120	COG0805	protein transport
BJF97_RS01165	COG1739	Uncharacterized protein family UPF0029
BJF97_RS01175	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
BJF97_RS01205	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BJF97_RS01210	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
BJF97_RS01210	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
BJF97_RS01245	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BJF97_RS01250	COG0250	Participates in transcription elongation, termination and antitermination
BJF97_RS01285	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BJF97_RS01290	COG1447	Phosphotransferase system cellobiose-specific component IIA
BJF97_RS01300	COG3706	GGDEF domain
BJF97_RS01305	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
BJF97_RS01315	COG2104	thiamine diphosphate biosynthetic process
BJF97_RS01320	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BJF97_RS01335	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
BJF97_RS01375	COG4191	Histidine kinase
BJF97_RS01385	COG0151	Belongs to the GarS family
BJF97_RS01430	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BJF97_RS01480	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BJF97_RS01520	COG1187	pseudouridine synthase activity
BJF97_RS01535	COG4650	regulator
BJF97_RS01550	COG0527	aspartate kinase activity
BJF97_RS01565	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BJF97_RS01575	COG0251	oxidation-reduction process
BJF97_RS01645	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BJF97_RS01655	COG0534	Mate efflux family protein
BJF97_RS01660	COG3237	CsbD-like
BJF97_RS01665	COG0735	belongs to the Fur family
BJF97_RS01675	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BJF97_RS01690	COG0305	Participates in initiation and elongation during chromosome replication
BJF97_RS01695	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BJF97_RS01700	COG1448	Aminotransferase
BJF97_RS01710	COG0432	Pfam Uncharacterised protein family UPF0047
BJF97_RS01715	COG2315	Protein conserved in bacteria
BJF97_RS01730	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BJF97_RS01735	COG0629	single-stranded DNA binding
BJF97_RS01740	COG0741	lytic transglycosylase activity
BJF97_RS01745	COG4771	TonB-dependent receptor
BJF97_RS01755	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BJF97_RS01770	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BJF97_RS01790	COG2252	PERMEase
BJF97_RS01795	COG0025	NhaP-type Na H and K H
BJF97_RS01800	COG0583	DNA-binding transcription factor activity
BJF97_RS01805	COG1380	Effector of murein hydrolase LrgA
BJF97_RS01810	COG1346	cytolysis
BJF97_RS01845	COG3162	membrane
BJF97_RS01850	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BJF97_RS01855	COG1301	dicarboxylic acid transport
BJF97_RS01860	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
BJF97_RS01865	COG3383	formate dehydrogenase (NAD+) activity
BJF97_RS01870	COG3383	formate dehydrogenase (NAD+) activity
BJF97_RS01875	COG1940	carbohydrate kinase activity
BJF97_RS01880	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BJF97_RS01885	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJF97_RS01890	COG1129	ABC transporter
BJF97_RS01895	COG1879	ABC-type sugar transport system periplasmic component
BJF97_RS01900	COG1737	Transcriptional regulator
BJF97_RS01905	COG0698	ribose 5-phosphate isomerase
BJF97_RS01915	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
BJF97_RS01920	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
BJF97_RS01925	COG3454	Phosphonate metabolism
BJF97_RS01930	COG4778	phosphonate C-P lyase system protein PhnL
BJF97_RS01935	COG4107	phosphonate C-P lyase system protein PhnK
BJF97_RS01940	COG3627	carbon phosphorus lyase activity
BJF97_RS01945	COG3626	phosphonate metabolism
BJF97_RS01950	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
BJF97_RS01955	COG3624	Phosphonate C-P lyase system protein PhnG
BJF97_RS01960	COG2188	Transcriptional regulator
BJF97_RS01965	COG2764	glyoxalase bleomycin resistance protein dioxygenase
BJF97_RS01970	COG2824	Alkylphosphonate utilization operon protein PhnA
BJF97_RS01990	COG0861	Integral membrane protein TerC family
BJF97_RS02005	COG2249	NAD(P)H dehydrogenase (quinone) activity
BJF97_RS02020	COG1216	Glycosyl transferase, family 2
BJF97_RS02030	COG0305	Participates in initiation and elongation during chromosome replication
BJF97_RS02070	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BJF97_RS02080	COG0629	single-stranded DNA binding
BJF97_RS02135	COG0741	lytic transglycosylase activity
BJF97_RS02290	COG4584	PFAM Integrase catalytic
BJF97_RS02295	COG1484	DNA-dependent DNA replication
BJF97_RS02330	COG0431	NADPH-dependent FMN reductase
BJF97_RS02345	COG1393	Belongs to the ArsC family
BJF97_RS02350	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BJF97_RS02365	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BJF97_RS02400	COG0589	response to stress
BJF97_RS02405	COG0659	secondary active sulfate transmembrane transporter activity
BJF97_RS02420	COG1342	Belongs to the UPF0251 family
BJF97_RS02435	COG0783	Belongs to the Dps family
BJF97_RS02440	COG0640	Transcriptional regulator
BJF97_RS02455	COG1227	inorganic diphosphatase activity
BJF97_RS02465	COG0148	phosphopyruvate hydratase activity
BJF97_RS02470	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BJF97_RS02480	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BJF97_RS02485	COG1193	negative regulation of DNA recombination
BJF97_RS02565	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
BJF97_RS02600	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
BJF97_RS02670	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BJF97_RS02845	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BJF97_RS02850	COG0583	DNA-binding transcription factor activity
BJF97_RS02860	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BJF97_RS02870	COG3730	PTS system glucitol sorbitol-specific
BJF97_RS02885	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS02890	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS02895	COG1349	DNA-binding transcription factor activity
BJF97_RS02900	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
BJF97_RS02900	COG0517	IMP dehydrogenase activity
BJF97_RS02945	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BJF97_RS02950	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BJF97_RS02955	COG1121	(ABC) transporter
BJF97_RS02970	COG2801	Transposase and inactivated derivatives
BJF97_RS03030	COG1309	transcriptional regulator
BJF97_RS03045	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BJF97_RS03050	COG1027	Aspartate ammonia-lyase
BJF97_RS03055	COG3030	protein affecting phage T7 exclusion by the F plasmid
BJF97_RS03060	COG0531	amino acid
BJF97_RS03070	COG0459	protein refolding
BJF97_RS03110	COG3121	Chaperone
BJF97_RS03125	COG1509	lysine 2,3-aminomutase activity
BJF97_RS03145	COG2076	Multidrug Resistance protein
BJF97_RS03150	COG3040	lipid binding
BJF97_RS03165	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BJF97_RS03170	COG1053	succinate dehydrogenase
BJF97_RS03185	COG1511	domain protein
BJF97_RS03185	COG3264	Mechanosensitive ion channel
BJF97_RS03200	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
BJF97_RS03205	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BJF97_RS03225	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BJF97_RS03230	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BJF97_RS03230	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BJF97_RS03235	COG0802	atpase or kinase
BJF97_RS03240	COG0860	N-Acetylmuramoyl-L-alanine amidase
BJF97_RS03260	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BJF97_RS03265	COG0330	HflC and HflK could
BJF97_RS03270	COG0330	HflC and HflK could
BJF97_RS03275	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
BJF97_RS03290	COG0557	exoribonuclease II activity
BJF97_RS03295	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BJF97_RS03305	COG1960	acyl-CoA dehydrogenase activity
BJF97_RS03315	COG3650	response to hydrogen peroxide
BJF97_RS03320	COG1073	alpha beta
BJF97_RS03380	COG2965	DNA replication, synthesis of RNA primer
BJF97_RS03385	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BJF97_RS03390	COG0359	binds to the 23S rRNA
BJF97_RS03400	COG3061	Opacity-associated protein A
BJF97_RS03405	COG0545	Peptidyl-prolyl cis-trans isomerase
BJF97_RS03410	COG1113	amino acid transport
BJF97_RS03420	COG0697	spore germination
BJF97_RS03430	COG0702	epimerase
BJF97_RS03435	COG1733	regulation of RNA biosynthetic process
BJF97_RS03450	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
BJF97_RS03475	COG1253	flavin adenine dinucleotide binding
BJF97_RS03485	COG0729	surface antigen
BJF97_RS03490	COG2911	Protein conserved in bacteria
BJF97_RS03495	COG2105	PFAM AIG2 family protein
BJF97_RS03505	COG1879	ABC-type sugar transport system periplasmic component
BJF97_RS03510	COG1129	ABC transporter
BJF97_RS03515	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJF97_RS03520	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJF97_RS03530	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BJF97_RS03550	COG1012	belongs to the aldehyde dehydrogenase family
BJF97_RS03560	COG0312	modulator of DNA gyrase
BJF97_RS03595	COG3964	amidohydrolase
BJF97_RS03610	COG2706	6-phosphogluconolactonase activity
BJF97_RS03615	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS03615	COG3711	transcriptional antiterminator
BJF97_RS03620	COG0602	queuosine metabolic process
BJF97_RS03640	COG1486	melibiose metabolic process
BJF97_RS03645	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BJF97_RS03650	COG0366	Alpha amylase catalytic
BJF97_RS03655	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BJF97_RS03655	COG1263	PTS System
BJF97_RS03670	COG0251	oxidation-reduction process
BJF97_RS03675	COG3397	chitin binding
BJF97_RS03690	COG2731	YhcH YjgK YiaL family protein
BJF97_RS03695	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BJF97_RS03720	COG0525	valine-tRNA ligase activity
BJF97_RS03725	COG2927	DNA polymerase III (CHI subunit)
BJF97_RS03735	COG0795	lipopolysaccharide-transporting ATPase activity
BJF97_RS03740	COG0795	lipopolysaccharide-transporting ATPase activity
BJF97_RS03745	COG0433	COG0433 Predicted ATPase
BJF97_RS03760	COG3718	enzyme involved in inositol metabolism
BJF97_RS03765	COG1737	Transcriptional regulator
BJF97_RS03765	COG0837	glucose binding
BJF97_RS03770	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BJF97_RS03775	COG3962	Belongs to the TPP enzyme family
BJF97_RS03785	COG1082	Xylose isomerase domain protein TIM barrel
BJF97_RS03795	COG2814	Major facilitator Superfamily
BJF97_RS03805	COG3842	ATPase activity
BJF97_RS03810	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BJF97_RS03815	COG0395	ABC-type sugar transport system, permease component
BJF97_RS03820	COG1175	transmembrane transport
BJF97_RS03825	COG1064	alcohol dehydrogenase
BJF97_RS03885	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BJF97_RS03890	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS03895	COG4948	Mandelate Racemase Muconate Lactonizing
BJF97_RS03900	COG0477	Major facilitator Superfamily
BJF97_RS03910	COG0477	Major facilitator Superfamily
BJF97_RS03925	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
BJF97_RS03930	COG2850	peptidyl-arginine hydroxylation
BJF97_RS03960	COG0842	Transport permease protein
BJF97_RS03965	COG1129	ABC transporter
BJF97_RS03965	COG0842	Transport permease protein
BJF97_RS03970	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BJF97_RS03975	COG3706	GGDEF domain
BJF97_RS03985	COG0814	amino acid
BJF97_RS04015	COG4869	propanediol catabolic process
BJF97_RS04025	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BJF97_RS04030	COG1882	Formate acetyltransferase
BJF97_RS04045	COG1012	belongs to the aldehyde dehydrogenase family
BJF97_RS04045	COG1454	alcohol dehydrogenase
BJF97_RS04080	COG2249	NAD(P)H dehydrogenase (quinone) activity
BJF97_RS04105	COG0531	amino acid
BJF97_RS04140	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BJF97_RS04145	COG5457	Domain of unknown function (DUF1127)
BJF97_RS04155	COG1566	PFAM secretion protein HlyD family protein
BJF97_RS04165	COG0583	DNA-binding transcription factor activity
BJF97_RS04170	COG3366	ferrous iron transmembrane transporter activity
BJF97_RS04175	COG0700	Nucleoside recognition
BJF97_RS04180	COG1473	amidohydrolase
BJF97_RS04190	COG1924	4 iron, 4 sulfur cluster binding
BJF97_RS04195	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
BJF97_RS04205	COG3969	phosphoadenosine phosphosulfate
BJF97_RS04210	COG1475	DNA binding
BJF97_RS04215	COG2814	Major facilitator Superfamily
BJF97_RS04220	COG2733	membrane
BJF97_RS04230	COG1280	lysine exporter protein (LysE YggA)
BJF97_RS04240	COG5464	transposase or invertase
BJF97_RS04245	COG1012	belongs to the aldehyde dehydrogenase family
BJF97_RS04260	COG0523	cobalamin synthesis protein
BJF97_RS04265	COG2879	small protein
BJF97_RS04270	COG1966	Carbon starvation protein
BJF97_RS04285	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BJF97_RS04290	COG2368	4-hydroxyphenylacetate
BJF97_RS04310	COG3971	2-oxopent-4-enoate hydratase activity
BJF97_RS04320	COG3384	dioxygenase
BJF97_RS04325	COG1012	belongs to the aldehyde dehydrogenase family
BJF97_RS04335	COG0179	Fumarylacetoacetate (FAA) hydrolase
BJF97_RS04340	COG1846	Transcriptional regulator
BJF97_RS04350	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
BJF97_RS04360	COG4145	pantothenate transmembrane transporter activity
BJF97_RS04365	COG3734	2-keto-3-deoxy-galactonokinase
BJF97_RS04370	COG0800	Aldolase
BJF97_RS04375	COG1737	Transcriptional regulator
BJF97_RS04385	COG0456	acetyltransferase
BJF97_RS04390	COG2271	Major facilitator Superfamily
BJF97_RS04395	COG1802	Transcriptional regulator
BJF97_RS04400	COG1063	alcohol dehydrogenase
BJF97_RS04410	COG3933	PFAM sigma-54 factor interaction domain-containing protein
BJF97_RS04410	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BJF97_RS04425	COG3715	PTS system
BJF97_RS04430	COG3716	PTS system mannose fructose sorbose family IID component
BJF97_RS04435	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BJF97_RS04440	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BJF97_RS04445	COG5464	transposase or invertase
BJF97_RS04460	COG1484	DNA-dependent DNA replication
BJF97_RS04475	COG2966	Psort location CytoplasmicMembrane, score
BJF97_RS04485	COG2207	Transcriptional regulator
BJF97_RS04490	COG2197	response regulator
BJF97_RS04495	COG2197	response regulator
BJF97_RS04500	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BJF97_RS04505	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BJF97_RS04510	COG4114	ferric iron reductase
BJF97_RS04515	COG3706	GGDEF domain
BJF97_RS04545	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
BJF97_RS04550	COG0456	acetyltransferase
BJF97_RS04555	COG1011	Hydrolase
BJF97_RS04565	COG2823	Periplasmic or secreted lipoprotein
BJF97_RS04570	COG5487	UPF0391 membrane protein
BJF97_RS04575	COG4667	esterase of the alpha-beta hydrolase superfamily
BJF97_RS04580	COG0084	hydrolase, TatD family'
BJF97_RS04585	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BJF97_RS04605	COG0813	purine-nucleoside phosphorylase activity
BJF97_RS04615	COG3726	membrane protein affecting hemolysin expression
BJF97_RS04620	COG0560	Phosphoserine phosphatase
BJF97_RS04635	COG0488	(ABC) transporter
BJF97_RS04640	COG0741	lytic transglycosylase activity
BJF97_RS04660	COG2207	Transcriptional regulator
BJF97_RS04660	COG3708	Transcriptional regulator
BJF97_RS04665	COG3045	CreA protein
BJF97_RS04670	COG0745	RESPONSE REGULATOR receiver
BJF97_RS04675	COG2205	protein histidine kinase activity
BJF97_RS04680	COG4452	Inner membrane protein CreD
BJF97_RS04685	COG0745	RESPONSE REGULATOR receiver
BJF97_RS04690	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
BJF97_RS04695	COG0460	homoserine dehydrogenase
BJF97_RS04695	COG0527	aspartate kinase activity
BJF97_RS04705	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BJF97_RS04715	COG1115	amino acid carrier protein
BJF97_RS04720	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BJF97_RS04725	COG0521	Mo-molybdopterin cofactor biosynthetic process
BJF97_RS04730	COG0477	Major facilitator Superfamily
BJF97_RS04735	COG1584	GPR1 FUN34 yaaH family protein
BJF97_RS04740	COG4735	regulation of single-species biofilm formation
BJF97_RS04800	COG0583	DNA-binding transcription factor activity
BJF97_RS04810	COG0196	riboflavin kinase activity
BJF97_RS04825	COG1047	Peptidyl-prolyl cis-trans
BJF97_RS04840	COG0583	DNA-binding transcription factor activity
BJF97_RS04845	COG2828	Protein conserved in bacteria
BJF97_RS04850	COG0471	metal ion transport
BJF97_RS04855	COG0471	metal ion transport
BJF97_RS04860	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BJF97_RS04870	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BJF97_RS04995	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
BJF97_RS05010	COG3493	citrate carrier protein
BJF97_RS05020	COG0564	pseudouridine synthase activity
BJF97_RS05030	COG0417	DNA replication proofreading
BJF97_RS05035	COG0235	Class ii aldolase
BJF97_RS05055	COG0586	Pfam SNARE associated Golgi protein
BJF97_RS05065	COG1178	ABC-type Fe3 transport system permease component
BJF97_RS05080	COG2814	Major facilitator Superfamily
BJF97_RS05085	COG2271	Major facilitator Superfamily
BJF97_RS05090	COG0583	DNA-binding transcription factor activity
BJF97_RS05100	COG0738	Major facilitator superfamily
BJF97_RS05105	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BJF97_RS05130	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BJF97_RS05140	COG0028	Belongs to the TPP enzyme family
BJF97_RS05150	COG1609	Transcriptional regulator
BJF97_RS05170	COG0768	penicillin binding
BJF97_RS05180	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BJF97_RS05195	COG0772	Belongs to the SEDS family
BJF97_RS05220	COG0849	cell division
BJF97_RS05225	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BJF97_RS05245	COG0494	nUDIX hydrolase
BJF97_RS05250	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
BJF97_RS05270	COG1459	type II secretion system
BJF97_RS05275	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BJF97_RS05280	COG4969	Belongs to the N-Me-Phe pilin family
BJF97_RS05295	COG3725	Membrane protein required for beta-lactamase induction
BJF97_RS05300	COG3940	Belongs to the glycosyl hydrolase 43 family
BJF97_RS05305	COG2211	Major facilitator Superfamily
BJF97_RS05310	COG1113	amino acid transport
BJF97_RS05315	COG2186	Transcriptional regulator
BJF97_RS05320	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
BJF97_RS05325	COG0508	dehydrogenase complex catalyzes the overall conversion of
BJF97_RS05330	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BJF97_RS05345	COG3064	Membrane
BJF97_RS05375	COG1349	DNA-binding transcription factor activity
BJF97_RS05390	COG0545	Peptidyl-prolyl cis-trans isomerase
BJF97_RS05405	COG2132	Multicopper oxidase
BJF97_RS05410	COG4993	Dehydrogenase
BJF97_RS05420	COG0288	reversible hydration of carbon dioxide
BJF97_RS05425	COG1131	(ABC) transporter
BJF97_RS05430	COG0842	Transport permease protein
BJF97_RS05435	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS05440	COG0726	polysaccharide deacetylase
BJF97_RS05465	COG3188	usher protein
BJF97_RS05470	COG3121	Chaperone
BJF97_RS05475	COG3539	Fimbrial protein
BJF97_RS05495	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BJF97_RS05500	COG0617	tRNA 3'-terminal CCA addition
BJF97_RS05520	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
BJF97_RS05525	COG1643	Atp-dependent helicase
BJF97_RS05615	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BJF97_RS05620	COG4774	siderophore transport
BJF97_RS05625	COG1120	ATPase activity
BJF97_RS05630	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BJF97_RS05635	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BJF97_RS05640	COG5464	transposase or invertase
BJF97_RS05660	COG2860	membrane
BJF97_RS05680	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BJF97_RS05685	COG3835	regulator
BJF97_RS05705	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
BJF97_RS05715	COG0024	Methionine aminopeptidase
BJF97_RS05725	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BJF97_RS05750	COG0575	Belongs to the CDS family
BJF97_RS05755	COG0750	zinc metalloprotease
BJF97_RS05765	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
BJF97_RS05770	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BJF97_RS05810	COG1982	Orn Lys Arg decarboxylase major
BJF97_RS05815	COG0346	lactoylglutathione lyase activity
BJF97_RS05825	COG4568	rho-dependent transcription termination
BJF97_RS05835	COG4681	YaeQ
BJF97_RS05840	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BJF97_RS05845	COG3015	lipoprotein NlpE involved in copper resistance
BJF97_RS05850	COG0791	NLP P60 protein
BJF97_RS05860	COG1720	tRNA m6t6A37 methyltransferase activity
BJF97_RS05870	COG1464	Belongs to the NlpA lipoprotein family
BJF97_RS05875	COG2011	ABC-type metal ion transport system permease component
BJF97_RS05885	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BJF97_RS05930	COG0583	DNA-binding transcription factor activity
BJF97_RS05935	COG2814	Major facilitator Superfamily
BJF97_RS05945	COG2226	methyltransferase
BJF97_RS05950	COG0741	lytic transglycosylase activity
BJF97_RS05950	COG1388	LysM domain
BJF97_RS05960	COG2226	methyltransferase
BJF97_RS05980	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BJF97_RS05995	COG0121	glutamine amidotransferase
BJF97_RS06000	COG3034	peptidoglycan biosynthetic process
BJF97_RS06015	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BJF97_RS06020	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BJF97_RS06035	COG2991	Protein conserved in bacteria
BJF97_RS06050	COG0454	-acetyltransferase
BJF97_RS06055	COG2195	Cleaves the N-terminal amino acid of tripeptides
BJF97_RS06075	COG1045	serine acetyltransferase
BJF97_RS06090	COG0297	glycogen (starch) synthase activity
BJF97_RS06090	COG0438	transferase activity, transferring glycosyl groups
BJF97_RS06095	COG0438	transferase activity, transferring glycosyl groups
BJF97_RS06100	COG0463	Glycosyl transferase, family 2
BJF97_RS06120	COG1596	polysaccharide export
BJF97_RS06130	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BJF97_RS06140	COG1012	belongs to the aldehyde dehydrogenase family
BJF97_RS06160	COG2186	Transcriptional regulator
BJF97_RS06165	COG0246	Mannitol dehydrogenase
BJF97_RS06180	COG3153	acetyltransferase
BJF97_RS06185	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
BJF97_RS06235	COG0477	Major facilitator Superfamily
BJF97_RS06245	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BJF97_RS06255	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BJF97_RS06260	COG0402	S-adenosylhomocysteine deaminase activity
BJF97_RS06265	COG2188	Transcriptional regulator
BJF97_RS06275	COG2986	histidine ammonia-lyase
BJF97_RS06305	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BJF97_RS06340	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BJF97_RS06345	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BJF97_RS06370	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BJF97_RS06375	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BJF97_RS06380	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BJF97_RS06385	COG0791	NLP P60 protein
BJF97_RS06390	COG0583	DNA-binding transcription factor activity
BJF97_RS06395	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BJF97_RS06410	COG3118	belongs to the thioredoxin family
BJF97_RS06430	COG3639	organic phosphonate transmembrane transporter activity
BJF97_RS06440	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
BJF97_RS06465	COG3188	usher protein
BJF97_RS06480	COG0765	amino acid transport
BJF97_RS06485	COG0765	amino acid transport
BJF97_RS06490	COG1126	abc transporter atp-binding protein
BJF97_RS06495	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BJF97_RS06530	COG4302	ethanolamine ammonia-lyase activity
BJF97_RS06535	COG4303	Ethanolamine ammonia lyase large subunit
BJF97_RS06545	COG5434	Belongs to the glycosyl hydrolase 28 family
BJF97_RS06550	COG0833	amino acid
BJF97_RS06555	COG2040	homocysteine
BJF97_RS06560	COG3842	ATPase activity
BJF97_RS06570	COG1840	ABC-type Fe3 transport system, periplasmic component
BJF97_RS06575	COG2271	Major facilitator Superfamily
BJF97_RS06590	COG4521	taurine ABC transporter
BJF97_RS06595	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
BJF97_RS06600	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BJF97_RS06605	COG2175	clavaminate synthase activity
BJF97_RS06615	COG1943	Transposase
BJF97_RS06620	COG0113	porphobilinogen synthase activity
BJF97_RS06625	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BJF97_RS06635	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
BJF97_RS06670	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS06680	COG1609	Transcriptional regulator
BJF97_RS06690	COG1785	Belongs to the alkaline phosphatase family
BJF97_RS06700	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BJF97_RS06710	COG3416	Protein conserved in bacteria
BJF97_RS06715	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BJF97_RS06725	COG4126	flavin adenine dinucleotide binding
BJF97_RS06740	COG1940	carbohydrate kinase activity
BJF97_RS06750	COG0419	ATPase involved in DNA repair
BJF97_RS06755	COG0420	3'-5' exonuclease activity
BJF97_RS06780	COG0366	Alpha amylase catalytic
BJF97_RS06785	COG0583	DNA-binding transcription factor activity
BJF97_RS06790	COG1335	isochorismatase
BJF97_RS06800	COG1574	metal-dependent hydrolase with the TIM-barrel fold
BJF97_RS06815	COG0450	alkyl hydroperoxide reductase
BJF97_RS06820	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
BJF97_RS06835	COG1862	Preprotein translocase
BJF97_RS06845	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BJF97_RS06870	COG4238	major outer membrane lipoprotein
BJF97_RS06880	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BJF97_RS06880	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BJF97_RS06900	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BJF97_RS06905	COG0667	Aldo Keto reductase
BJF97_RS06915	COG0142	geranyltranstransferase activity
BJF97_RS06935	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BJF97_RS06945	COG2814	Major facilitator Superfamily
BJF97_RS06950	COG0673	inositol 2-dehydrogenase activity
BJF97_RS06955	COG2211	Major facilitator Superfamily
BJF97_RS06985	COG1053	succinate dehydrogenase
BJF97_RS06995	COG1414	Transcriptional regulator
BJF97_RS07010	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BJF97_RS07015	COG1845	cytochrome c oxidase, subunit III
BJF97_RS07020	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BJF97_RS07025	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BJF97_RS07030	COG2223	nitrite transmembrane transporter activity
BJF97_RS07035	COG3056	Lipoprotein
BJF97_RS07040	COG0271	Belongs to the BolA IbaG family
BJF97_RS07060	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BJF97_RS07065	COG0776	regulation of translation
BJF97_RS07070	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BJF97_RS07075	COG1555	photosystem II stabilization
BJF97_RS07080	COG0824	Thioesterase
BJF97_RS07090	COG4533	DNA binding
BJF97_RS07105	COG1522	sequence-specific DNA binding
BJF97_RS07110	COG1132	(ABC) transporter
BJF97_RS07115	COG1132	(ABC) transporter
BJF97_RS07125	COG0347	Belongs to the P(II) protein family
BJF97_RS07130	COG0004	ammonium transporteR
BJF97_RS07135	COG1946	Acyl-CoA thioesterase
BJF97_RS07140	COG3126	Type III secretion system lipoprotein chaperone (YscW)
BJF97_RS07145	COG3695	enzyme binding
BJF97_RS07175	COG2364	Membrane
BJF97_RS07180	COG5507	3-demethylubiquinone-9 3-methyltransferase
BJF97_RS07195	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BJF97_RS07205	COG2182	Extracellular solute-binding protein
BJF97_RS07210	COG1175	transmembrane transport
BJF97_RS07215	COG3833	ABC-type maltose transport systems, permease component
BJF97_RS07220	COG3867	Arabinogalactan endo-beta-1,4-galactanase
BJF97_RS07225	COG1874	Beta-galactosidase
BJF97_RS07230	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BJF97_RS07230	COG1263	PTS System
BJF97_RS07250	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BJF97_RS07270	COG0110	maltose O-acetyltransferase activity
BJF97_RS07285	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BJF97_RS07290	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BJF97_RS07300	COG3264	Mechanosensitive ion channel
BJF97_RS07300	COG1196	nuclear chromosome segregation
BJF97_RS07315	COG3923	Primosomal replication protein n
BJF97_RS07320	COG2832	Protein of unknown function (DUF454)
BJF97_RS07360	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BJF97_RS07365	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BJF97_RS07365	COG4651	solute:proton antiporter activity
BJF97_RS07370	COG2223	nitrite transmembrane transporter activity
BJF97_RS07380	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BJF97_RS07385	COG3735	TraB family
BJF97_RS07405	COG0811	peptide transport
BJF97_RS07435	COG1585	Membrane protein implicated in regulation of membrane protease activity
BJF97_RS07440	COG0330	HflC and HflK could
BJF97_RS07445	COG4619	ABC transporter
BJF97_RS07450	COG0390	transport system, permease component
BJF97_RS07455	COG3118	belongs to the thioredoxin family
BJF97_RS07460	COG0300	oxidoreductase activity
BJF97_RS07465	COG2755	lipolytic protein G-D-S-L family
BJF97_RS07470	COG4181	ATPase activity
BJF97_RS07475	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
BJF97_RS07495	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BJF97_RS07500	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BJF97_RS07510	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BJF97_RS07520	COG2501	S4 domain
BJF97_RS07565	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
BJF97_RS07575	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BJF97_RS07585	COG1984	allophanate hydrolase subunit 2
BJF97_RS07590	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BJF97_RS07595	COG3842	ATPase activity
BJF97_RS07610	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
BJF97_RS07615	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BJF97_RS07625	COG2808	Putative FMN-binding domain
BJF97_RS07635	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BJF97_RS07645	COG0583	DNA-binding transcription factor activity
BJF97_RS07655	COG3710	Transcriptional regulator
BJF97_RS07660	COG0531	amino acid
BJF97_RS07670	COG3104	oligopeptide transport
BJF97_RS07685	COG2367	Beta-lactamase
BJF97_RS07695	COG0673	inositol 2-dehydrogenase activity
BJF97_RS07710	COG1129	ABC transporter
BJF97_RS07715	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJF97_RS07720	COG1263	PTS System
BJF97_RS07720	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BJF97_RS07720	COG2190	(PTS) system
BJF97_RS07725	COG2723	6-phospho-beta-galactosidase activity
BJF97_RS07730	COG3711	transcriptional antiterminator
BJF97_RS07740	COG3550	peptidyl-serine autophosphorylation
BJF97_RS07770	COG1120	ATPase activity
BJF97_RS07775	COG4139	cobalamin transport
BJF97_RS07795	COG1473	amidohydrolase
BJF97_RS07800	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BJF97_RS07805	COG0667	Aldo Keto reductase
BJF97_RS07815	COG1113	amino acid transport
BJF97_RS07820	COG2211	Major facilitator Superfamily
BJF97_RS07840	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS07845	COG0583	DNA-binding transcription factor activity
BJF97_RS07850	COG2771	luxR family
BJF97_RS07865	COG3188	usher protein
BJF97_RS07885	COG0494	nUDIX hydrolase
BJF97_RS07895	COG0668	transmembrane transport
BJF97_RS07900	COG0477	Major facilitator Superfamily
BJF97_RS07910	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BJF97_RS07910	COG3933	PFAM sigma-54 factor interaction domain-containing protein
BJF97_RS07915	COG2222	sugar isomerase
BJF97_RS07920	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BJF97_RS07925	COG3716	PTS system mannose fructose sorbose family IID component
BJF97_RS07935	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BJF97_RS07945	COG0778	Nitroreductase
BJF97_RS07950	COG2315	Protein conserved in bacteria
BJF97_RS07980	COG1621	beta-fructofuranosidase activity
BJF97_RS07985	COG2211	Major facilitator Superfamily
BJF97_RS07990	COG1609	Transcriptional regulator
BJF97_RS08015	COG3698	Phosphodiester glycosidase
BJF97_RS08035	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BJF97_RS08040	COG4608	Belongs to the ABC transporter superfamily
BJF97_RS08045	COG0444	Belongs to the ABC transporter superfamily
BJF97_RS08050	COG0154	amidase activity
BJF97_RS08075	COG1280	lysine exporter protein (LysE YggA)
BJF97_RS08090	COG0765	amino acid transport
BJF97_RS08095	COG0765	amino acid transport
BJF97_RS08105	COG4221	oxidoreductase activity
BJF97_RS08110	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BJF97_RS08115	COG4608	Belongs to the ABC transporter superfamily
BJF97_RS08120	COG0444	Belongs to the ABC transporter superfamily
BJF97_RS08125	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BJF97_RS08130	COG0601	transmembrane transport
BJF97_RS08160	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BJF97_RS08170	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS08180	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJF97_RS08185	COG1129	ABC transporter
BJF97_RS08195	COG1879	ABC-type sugar transport system periplasmic component
BJF97_RS08200	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BJF97_RS08205	COG2390	Transcriptional regulator
BJF97_RS08210	COG3959	Transketolase, thiamine diphosphate binding domain
BJF97_RS08215	COG3958	Transketolase
BJF97_RS08220	COG2977	Belongs to the P-Pant transferase superfamily
BJF97_RS08225	COG4771	TonB-dependent receptor
BJF97_RS08230	COG2382	esterase
BJF97_RS08235	COG3251	PFAM MbtH domain protein
BJF97_RS08240	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BJF97_RS08240	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
BJF97_RS08245	COG1120	ATPase activity
BJF97_RS08250	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BJF97_RS08255	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BJF97_RS08270	COG4592	Periplasmic binding protein
BJF97_RS08275	COG1169	isochorismate synthase
BJF97_RS08280	COG1021	2,3-dihydroxybenzoate-AMP ligase
BJF97_RS08285	COG1535	isochorismatase
BJF97_RS08285	COG3433	isochorismatase activity
BJF97_RS08290	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS08300	COG1966	Carbon starvation protein
BJF97_RS08305	COG2879	small protein
BJF97_RS08315	COG0371	Dehydrogenase
BJF97_RS08320	COG1129	ABC transporter
BJF97_RS08325	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJF97_RS08355	COG2271	Major facilitator Superfamily
BJF97_RS08360	COG0483	inositol monophosphate 1-phosphatase activity
BJF97_RS08370	COG0402	S-adenosylhomocysteine deaminase activity
BJF97_RS08380	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BJF97_RS08395	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BJF97_RS08405	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJF97_RS08410	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJF97_RS08415	COG1129	ABC transporter
BJF97_RS08430	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
BJF97_RS08435	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
BJF97_RS08440	COG0436	Aminotransferase
BJF97_RS08445	COG1475	DNA binding
BJF97_RS08450	COG3969	phosphoadenosine phosphosulfate
BJF97_RS08455	COG0583	DNA-binding transcription factor activity
BJF97_RS08465	COG3634	alkyl hydroperoxide reductase activity
BJF97_RS08475	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BJF97_RS08480	COG3719	Belongs to the RNase T2 family
BJF97_RS08485	COG3069	C4-dicarboxylate transmembrane transporter activity
BJF97_RS08505	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BJF97_RS08510	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BJF97_RS08520	COG0583	DNA-binding transcription factor activity
BJF97_RS08535	COG1686	Belongs to the peptidase S11 family
BJF97_RS08540	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BJF97_RS08545	COG0772	Belongs to the SEDS family
BJF97_RS08550	COG0768	penicillin binding
BJF97_RS08560	COG0799	negative regulation of ribosome biogenesis
BJF97_RS08575	COG1466	dna polymerase III delta subunit
BJF97_RS08590	COG2888	peptidyl-tyrosine sulfation
BJF97_RS08600	COG2831	hemolysin activation secretion protein
BJF97_RS08605	COG1126	abc transporter atp-binding protein
BJF97_RS08610	COG0765	amino acid transport
BJF97_RS08615	COG0765	amino acid transport
BJF97_RS08630	COG4535	Mg2 and Co2 transporter CorC
BJF97_RS08635	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BJF97_RS08640	COG1702	phosphate starvation-inducible protein PhoH
BJF97_RS08650	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BJF97_RS08695	COG0367	asparagine synthase
BJF97_RS08700	COG0647	UMP catabolic process
BJF97_RS08705	COG1940	carbohydrate kinase activity
BJF97_RS08705	COG1846	Transcriptional regulator
BJF97_RS08710	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BJF97_RS08750	COG1053	succinate dehydrogenase
BJF97_RS08755	COG0583	DNA-binding transcription factor activity
BJF97_RS08760	COG0735	belongs to the Fur family
BJF97_RS08775	COG0596	Alpha beta hydrolase
BJF97_RS08780	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
BJF97_RS08785	COG0033	Phosphoglucomutase
BJF97_RS08795	COG1349	DNA-binding transcription factor activity
BJF97_RS08800	COG1063	alcohol dehydrogenase
BJF97_RS08805	COG1879	ABC-type sugar transport system periplasmic component
BJF97_RS08810	COG1129	ABC transporter
BJF97_RS08815	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJF97_RS08820	COG1070	Carbohydrate kinase
BJF97_RS08825	COG3623	hexulose-6-phosphate isomerase
BJF97_RS08835	COG0745	RESPONSE REGULATOR receiver
BJF97_RS08840	COG2205	protein histidine kinase activity
BJF97_RS08870	COG0415	Belongs to the DNA photolyase family
BJF97_RS08880	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BJF97_RS08885	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BJF97_RS08890	COG1984	allophanate hydrolase subunit 2
BJF97_RS08920	COG0372	Belongs to the citrate synthase family
BJF97_RS08930	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
BJF97_RS08935	COG1053	succinate dehydrogenase
BJF97_RS08940	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BJF97_RS08945	COG0567	Dehydrogenase, E1 component
BJF97_RS08950	COG0508	dehydrogenase complex catalyzes the overall conversion of
BJF97_RS08960	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BJF97_RS08970	COG0583	DNA-binding transcription factor activity
BJF97_RS08985	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
BJF97_RS08985	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
BJF97_RS08995	COG1301	dicarboxylic acid transport
BJF97_RS09010	COG3799	methylaspartate ammonia-lyase activity
BJF97_RS09015	COG4865	methylaspartate mutase activity
BJF97_RS09025	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BJF97_RS09035	COG3039	Transposase
BJF97_RS09040	COG1271	oxidase subunit
BJF97_RS09045	COG1294	oxidase, subunit
BJF97_RS09050	COG4890	Cyd operon protein YbgT
BJF97_RS09055	COG3790	cyd operon protein YbgE
BJF97_RS09060	COG0824	Thioesterase
BJF97_RS09065	COG0811	peptide transport
BJF97_RS09070	COG0848	biopolymer transport protein
BJF97_RS09075	COG3064	Membrane
BJF97_RS09085	COG2885	chlorophyll binding
BJF97_RS09090	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
BJF97_RS09140	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
BJF97_RS09160	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BJF97_RS09170	COG2017	converts alpha-aldose to the beta-anomer
BJF97_RS09180	COG1085	galactose-1-phosphate uridylyltransferase
BJF97_RS09185	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BJF97_RS09190	COG1119	ATPase activity
BJF97_RS09195	COG3585	molybdate ion transport
BJF97_RS09195	COG2005	Transcriptional regulator
BJF97_RS09205	COG0725	ABC transporter, periplasmic molybdate-binding protein
BJF97_RS09210	COG4149	molybdate abc transporter
BJF97_RS09220	COG0561	phosphatase activity
BJF97_RS09255	COG2200	EAL domain
BJF97_RS09260	COG0789	Transcriptional regulator
BJF97_RS09275	COG4677	pectinesterase activity
BJF97_RS09305	COG1881	PFAM PEBP family protein
BJF97_RS09310	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BJF97_RS09325	COG2226	methyltransferase
BJF97_RS09350	COG0745	RESPONSE REGULATOR receiver
BJF97_RS09370	COG0521	Mo-molybdopterin cofactor biosynthetic process
BJF97_RS09380	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BJF97_RS09385	COG0314	molybdopterin synthase activity
BJF97_RS09390	COG0670	Belongs to the BI1 family
BJF97_RS09395	COG0392	lysyltransferase activity
BJF97_RS09400	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BJF97_RS09405	COG3568	Endonuclease Exonuclease Phosphatase
BJF97_RS09415	COG0842	Transport permease protein
BJF97_RS09420	COG0842	Transport permease protein
BJF97_RS09425	COG1131	(ABC) transporter
BJF97_RS09430	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BJF97_RS09435	COG1309	transcriptional regulator
BJF97_RS09440	COG0583	DNA-binding transcription factor activity
BJF97_RS09445	COG3039	Transposase
BJF97_RS09450	COG2271	Major facilitator Superfamily
BJF97_RS09455	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS09460	COG3959	Transketolase, thiamine diphosphate binding domain
BJF97_RS09465	COG3958	Transketolase
BJF97_RS09470	COG0513	Belongs to the DEAD box helicase family
BJF97_RS09480	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BJF97_RS09490	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BJF97_RS09500	COG4774	siderophore transport
BJF97_RS09515	COG0668	transmembrane transport
BJF97_RS09520	COG1126	abc transporter atp-binding protein
BJF97_RS09525	COG0765	amino acid transport
BJF97_RS09530	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BJF97_RS09545	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
BJF97_RS09550	COG2194	sulfuric ester hydrolase activity
BJF97_RS09565	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BJF97_RS09570	COG0667	Aldo Keto reductase
BJF97_RS09575	COG2723	6-phospho-beta-galactosidase activity
BJF97_RS09580	COG2188	Transcriptional regulator
BJF97_RS09585	COG1376	ErfK ybiS ycfS ynhG family protein
BJF97_RS09595	COG0488	(ABC) transporter
BJF97_RS09600	COG3547	Transposase (IS116 IS110 IS902 family)
BJF97_RS09610	COG2271	Major facilitator Superfamily
BJF97_RS09615	COG1609	Transcriptional regulator
BJF97_RS09625	COG0561	phosphatase activity
BJF97_RS09630	COG1882	Formate acetyltransferase
BJF97_RS09635	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BJF97_RS09640	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BJF97_RS09645	COG0303	'Molybdopterin
BJF97_RS09650	COG1446	asparaginase
BJF97_RS09660	COG0747	negative chemotaxis
BJF97_RS09695	COG2133	pyrroloquinoline quinone binding
BJF97_RS09700	COG0625	glutathione transferase activity
BJF97_RS09705	COG0582	viral genome integration into host DNA
BJF97_RS09755	COG1846	Transcriptional regulator
BJF97_RS09800	COG4725	Belongs to the MT-A70-like family
BJF97_RS09815	COG3772	lysozyme
BJF97_RS09905	COG4386	tail sheath protein
BJF97_RS09975	COG1686	Belongs to the peptidase S11 family
BJF97_RS09980	COG1349	DNA-binding transcription factor activity
BJF97_RS09985	COG0671	phosphoesterase, PA-phosphatase related
BJF97_RS09990	COG2814	Major facilitator Superfamily
BJF97_RS09995	COG0561	phosphatase activity
BJF97_RS10000	COG0738	Major facilitator superfamily
BJF97_RS10005	COG3226	Transcriptional regulator
BJF97_RS10030	COG0778	Nitroreductase
BJF97_RS10045	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BJF97_RS10050	COG3842	ATPase activity
BJF97_RS10055	COG1176	ABC-type spermidine putrescine transport system, permease component I
BJF97_RS10060	COG1177	transmembrane transport
BJF97_RS10075	COG0745	RESPONSE REGULATOR receiver
BJF97_RS10080	COG5002	protein histidine kinase activity
BJF97_RS10085	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BJF97_RS10090	COG4160	amino acid transport
BJF97_RS10095	COG4215	(ABC) transporter
BJF97_RS10100	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BJF97_RS10105	COG1126	abc transporter atp-binding protein
BJF97_RS10115	COG0393	Putative heavy-metal-binding
BJF97_RS10120	COG3023	N-Acetylmuramoyl-L-alanine amidase
BJF97_RS10125	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BJF97_RS10130	COG0702	epimerase
BJF97_RS10135	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
BJF97_RS10140	COG0028	Belongs to the TPP enzyme family
BJF97_RS10150	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BJF97_RS10160	COG2431	L-lysine efflux transmembrane transporter activity
BJF97_RS10165	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BJF97_RS10170	COG3593	DNA synthesis involved in DNA repair
BJF97_RS10175	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BJF97_RS10185	COG1278	Cold shock
BJF97_RS10195	COG0542	response to heat
BJF97_RS10200	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BJF97_RS10210	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BJF97_RS10215	COG4988	ABC transporter
BJF97_RS10220	COG0492	ferredoxin-NADP+ reductase activity
BJF97_RS10230	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BJF97_RS10230	COG1674	ftsk spoiiie
BJF97_RS10240	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BJF97_RS10250	COG0243	molybdopterin cofactor binding
BJF97_RS10255	COG0437	4 iron, 4 sulfur cluster binding
BJF97_RS10260	COG3302	dmso reductase anchor subunit
BJF97_RS10265	COG0477	Major facilitator Superfamily
BJF97_RS10270	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS10275	COG3958	Transketolase
BJF97_RS10280	COG3959	Transketolase, thiamine diphosphate binding domain
BJF97_RS10300	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BJF97_RS10305	COG1882	Formate acetyltransferase
BJF97_RS10310	COG2116	formate transmembrane transporter activity
BJF97_RS10315	COG1944	ATP diphosphatase activity
BJF97_RS10320	COG2323	membrane
BJF97_RS10340	COG0539	negative regulation of cytoplasmic translation
BJF97_RS10350	COG0658	competence protein
BJF97_RS10350	COG2333	competence protein COMEC
BJF97_RS10355	COG1132	(ABC) transporter
BJF97_RS10365	COG3214	Protein conserved in bacteria
BJF97_RS10380	COG3173	Aminoglycoside phosphotransferase
BJF97_RS10385	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BJF97_RS10390	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BJF97_RS10400	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
BJF97_RS10410	COG2989	Protein conserved in bacteria
BJF97_RS10420	COG3108	Peptidase M15
BJF97_RS10425	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BJF97_RS10435	COG1448	Aminotransferase
BJF97_RS10440	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BJF97_RS10455	COG0308	aminopeptidase N
BJF97_RS10460	COG1116	anion transmembrane transporter activity
BJF97_RS10465	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BJF97_RS10470	COG0431	NADPH-dependent FMN reductase
BJF97_RS10485	COG3217	Mosc domain protein beta barrel domain protein
BJF97_RS10485	COG0633	Ferredoxin
BJF97_RS10495	COG0488	(ABC) transporter
BJF97_RS10500	COG2995	paraquat-inducible protein a
BJF97_RS10505	COG3008	intermembrane lipid transfer
BJF97_RS10505	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BJF97_RS10510	COG3009	Protein conserved in bacteria
BJF97_RS10520	COG1067	ATP-dependent peptidase activity
BJF97_RS10540	COG3070	regulator of competence-specific genes
BJF97_RS10545	COG1289	transmembrane transporter activity
BJF97_RS10550	COG3304	Inner membrane component domain
BJF97_RS10555	COG0210	DNA helicase
BJF97_RS10565	COG1832	CoA-binding protein
BJF97_RS10595	COG2274	protein secretion by the type I secretion system
BJF97_RS10600	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BJF97_RS10630	COG1881	PFAM PEBP family protein
BJF97_RS10635	COG2207	Transcriptional regulator
BJF97_RS10650	COG0670	Belongs to the BI1 family
BJF97_RS10675	COG4821	SIS domain
BJF97_RS10685	COG4821	SIS domain
BJF97_RS10690	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BJF97_RS10695	COG3716	PTS system mannose fructose sorbose family IID component
BJF97_RS10700	COG3715	PTS system
BJF97_RS10710	COG2188	Transcriptional regulator
BJF97_RS10715	COG0436	Aminotransferase
BJF97_RS10720	COG0504	CTP synthase activity
BJF97_RS10725	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BJF97_RS10730	COG0006	proline dipeptidase activity
BJF97_RS10740	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BJF97_RS10745	COG1126	abc transporter atp-binding protein
BJF97_RS10750	COG0765	amino acid transport
BJF97_RS10755	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BJF97_RS10765	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS10780	COG2207	Transcriptional regulator
BJF97_RS10785	COG1486	melibiose metabolic process
BJF97_RS10800	COG0300	oxidoreductase activity
BJF97_RS10805	COG0604	alcohol dehydrogenase
BJF97_RS10825	COG0814	amino acid
BJF97_RS10830	COG0156	8-amino-7-oxononanoate synthase activity
BJF97_RS10860	COG1126	abc transporter atp-binding protein
BJF97_RS10865	COG0765	amino acid transport
BJF97_RS10885	COG1278	Cold shock
BJF97_RS10890	COG1278	Cold shock
BJF97_RS10900	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BJF97_RS10910	COG0745	RESPONSE REGULATOR receiver
BJF97_RS10915	COG5002	protein histidine kinase activity
BJF97_RS10930	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJF97_RS10940	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BJF97_RS11010	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BJF97_RS11015	COG2233	PERMEase
BJF97_RS11025	COG2351	hydroxyisourate hydrolase activity
BJF97_RS11030	COG0402	S-adenosylhomocysteine deaminase activity
BJF97_RS11035	COG1953	Uracil, thiamine, allantoin
BJF97_RS11090	COG0765	amino acid transport
BJF97_RS11100	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BJF97_RS11115	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
BJF97_RS11125	COG0287	Prephenate dehydrogenase
BJF97_RS11125	COG1605	Chorismate mutase
BJF97_RS11135	COG3706	GGDEF domain
BJF97_RS11140	COG2207	Transcriptional regulator
BJF97_RS11150	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BJF97_RS11155	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BJF97_RS11160	COG1882	Formate acetyltransferase
BJF97_RS11165	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BJF97_RS11170	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BJF97_RS11175	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BJF97_RS11175	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS11175	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS11180	COG0473	3-isopropylmalate dehydrogenase activity
BJF97_RS11185	COG0583	DNA-binding transcription factor activity
BJF97_RS11190	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BJF97_RS11195	COG1012	belongs to the aldehyde dehydrogenase family
BJF97_RS11200	COG1917	Cupin 2, conserved barrel domain protein
BJF97_RS11200	COG1396	sequence-specific DNA binding
BJF97_RS11205	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
BJF97_RS11210	COG0174	glutamine synthetase
BJF97_RS11215	COG0531	amino acid
BJF97_RS11245	COG3729	General stress protein
BJF97_RS11250	COG2233	PERMEase
BJF97_RS11285	COG1309	transcriptional regulator
BJF97_RS11300	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BJF97_RS11310	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BJF97_RS11320	COG2822	iron ion transport
BJF97_RS11330	COG1702	phosphate starvation-inducible protein PhoH
BJF97_RS11350	COG5002	protein histidine kinase activity
BJF97_RS11350	COG3850	Histidine kinase
BJF97_RS11370	COG1335	isochorismatase
BJF97_RS11380	COG0583	DNA-binding transcription factor activity
BJF97_RS11400	COG3381	protein complex oligomerization
BJF97_RS11440	COG5645	(Lipo)protein
BJF97_RS11455	COG1560	Kdo2-lipid A biosynthetic process
BJF97_RS11495	COG2999	glutathione oxidoreductase activity
BJF97_RS11505	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BJF97_RS11515	COG0673	inositol 2-dehydrogenase activity
BJF97_RS11525	COG2814	Major facilitator Superfamily
BJF97_RS11530	COG0583	DNA-binding transcription factor activity
BJF97_RS11535	COG1530	ribonuclease E activity
BJF97_RS11550	COG0424	maF-like protein
BJF97_RS11555	COG1399	metal-binding, possibly nucleic acid-binding protein
BJF97_RS11575	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BJF97_RS11590	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BJF97_RS11600	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BJF97_RS11605	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BJF97_RS11615	COG0470	DNA polymerase III
BJF97_RS11620	COG0084	hydrolase, TatD family'
BJF97_RS11630	COG4773	Receptor
BJF97_RS11635	COG0537	adenosine 5'-monophosphoramidase activity
BJF97_RS11640	COG5633	Lipoprotein
BJF97_RS11665	COG1252	NADH dehydrogenase
BJF97_RS11670	COG3134	Outer membrane lipoprotein
BJF97_RS11680	COG1309	transcriptional regulator
BJF97_RS11690	COG1376	ErfK ybiS ycfS ynhG family protein
BJF97_RS11690	COG1388	LysM domain
BJF97_RS11695	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BJF97_RS11700	COG4591	ABC-type transport system involved in lipoprotein release permease component
BJF97_RS11705	COG1136	(ABC) transporter
BJF97_RS11710	COG4591	ABC-type transport system involved in lipoprotein release permease component
BJF97_RS11720	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BJF97_RS11725	COG2390	Transcriptional regulator
BJF97_RS11740	COG3395	kinase activity
BJF97_RS11755	COG0698	ribose 5-phosphate isomerase
BJF97_RS11760	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BJF97_RS11765	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BJF97_RS11780	COG1177	transmembrane transport
BJF97_RS11800	COG2850	peptidyl-arginine hydroxylation
BJF97_RS11805	COG2205	protein histidine kinase activity
BJF97_RS11810	COG0745	RESPONSE REGULATOR receiver
BJF97_RS11820	COG2814	Major facilitator Superfamily
BJF97_RS11825	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BJF97_RS11845	COG1187	pseudouridine synthase activity
BJF97_RS11850	COG0538	isocitrate dehydrogenase activity
BJF97_RS11855	COG0582	viral genome integration into host DNA
BJF97_RS11875	COG3328	transposase activity
BJF97_RS11900	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
BJF97_RS11905	COG5532	Uncharacterized conserved protein (DUF2303)
BJF97_RS11950	COG4626	Terminase
BJF97_RS11950	COG1802	Transcriptional regulator
BJF97_RS11960	COG4725	Belongs to the MT-A70-like family
BJF97_RS11980	COG1403	HNH endonuclease
BJF97_RS11985	COG0484	heat shock protein binding
BJF97_RS12025	COG3179	chitinase
BJF97_RS12070	COG4626	Terminase
BJF97_RS12070	COG1802	Transcriptional regulator
BJF97_RS12075	COG4695	Portal protein
BJF97_RS12170	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BJF97_RS12190	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BJF97_RS12215	COG3706	GGDEF domain
BJF97_RS12220	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
BJF97_RS12230	COG1120	ATPase activity
BJF97_RS12235	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BJF97_RS12240	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BJF97_RS12245	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BJF97_RS12250	COG4772	TonB-dependent receptor
BJF97_RS12255	COG3712	iron ion homeostasis
BJF97_RS12260	COG1595	DNA-templated transcription, initiation
BJF97_RS12265	COG2226	methyltransferase
BJF97_RS12270	COG1560	Kdo2-lipid A biosynthetic process
BJF97_RS12280	COG3182	Iron-regulated membrane protein
BJF97_RS12285	COG2199	diguanylate cyclase activity
BJF97_RS12285	COG2203	Gaf domain
BJF97_RS12290	COG3042	response to heat
BJF97_RS12295	COG3189	MarR family transcriptional regulator
BJF97_RS12300	COG1683	Conserved Protein
BJF97_RS12305	COG0504	CTP synthase activity
BJF97_RS12310	COG2807	transmembrane transport
BJF97_RS12315	COG2207	Transcriptional regulator
BJF97_RS12325	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BJF97_RS12330	COG2199	diguanylate cyclase activity
BJF97_RS12340	COG0859	PFAM glycosyl transferase family 9
BJF97_RS12350	COG2766	serine protein kinase
BJF97_RS12355	COG3713	MltA-interacting MipA family protein
BJF97_RS12360	COG0656	L-ascorbic acid biosynthetic process
BJF97_RS12380	COG3139	Protein of unknown function (DUF1315)
BJF97_RS12395	COG1335	isochorismatase
BJF97_RS12400	COG0252	asparaginase activity
BJF97_RS12405	COG0616	signal peptide processing
BJF97_RS12410	COG0778	Nitroreductase
BJF97_RS12420	COG0709	Synthesizes selenophosphate from selenide and ATP
BJF97_RS12425	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BJF97_RS12435	COG0494	nUDIX hydrolase
BJF97_RS12440	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BJF97_RS12445	COG2897	thiosulfate sulfurtransferase activity
BJF97_RS12450	COG4136	ATPase activity
BJF97_RS12455	COG4135	transport system, permease component
BJF97_RS12460	COG4134	Bacterial extracellular solute-binding protein
BJF97_RS12465	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BJF97_RS12470	COG0398	Pfam SNARE associated Golgi protein
BJF97_RS12475	COG0398	Pfam SNARE associated Golgi protein
BJF97_RS12480	COG0708	Exodeoxyribonuclease III
BJF97_RS12490	COG3138	arginine N-succinyltransferase
BJF97_RS12510	COG3678	ATP-independent chaperone mediated protein folding
BJF97_RS12515	COG1704	LemA family
BJF97_RS12520	COG4907	membrane protein (DUF2207)
BJF97_RS12525	COG0322	excinuclease ABC activity
BJF97_RS12535	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BJF97_RS12540	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BJF97_RS12545	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BJF97_RS12550	COG1447	Phosphotransferase system cellobiose-specific component IIA
BJF97_RS12555	COG1917	Cupin 2, conserved barrel domain protein
BJF97_RS12555	COG2169	Transcriptional regulator
BJF97_RS12560	COG1486	melibiose metabolic process
BJF97_RS12570	COG0753	catalase activity
BJF97_RS12580	COG1823	symporter activity
BJF97_RS12585	COG1988	membrane-bound metal-dependent
BJF97_RS12590	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS12595	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BJF97_RS12615	COG0038	chloride channel
BJF97_RS12630	COG3047	cAMP biosynthetic process
BJF97_RS12645	COG0583	DNA-binding transcription factor activity
BJF97_RS12670	COG0134	indole-3-glycerol-phosphate synthase activity
BJF97_RS12670	COG0135	phosphoribosylanthranilate isomerase activity
BJF97_RS12675	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BJF97_RS12675	COG0512	Glutamine amidotransferase of anthranilate synthase
BJF97_RS12680	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BJF97_RS12690	COG0009	L-threonylcarbamoyladenylate synthase
BJF97_RS12695	COG1187	pseudouridine synthase activity
BJF97_RS12700	COG2211	Major facilitator Superfamily
BJF97_RS12705	COG1472	Belongs to the glycosyl hydrolase 3 family
BJF97_RS12710	COG2207	Transcriptional regulator
BJF97_RS12720	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS12725	COG0616	signal peptide processing
BJF97_RS12745	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BJF97_RS12755	COG0671	phosphoesterase, PA-phosphatase related
BJF97_RS12760	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
BJF97_RS12765	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
BJF97_RS12775	COG0023	Translation Initiation Factor
BJF97_RS12785	COG1349	DNA-binding transcription factor activity
BJF97_RS12800	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BJF97_RS12800	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BJF97_RS12805	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BJF97_RS12810	COG4172	Belongs to the ABC transporter superfamily
BJF97_RS12820	COG4171	peptide transport system, permease
BJF97_RS12830	COG4166	transmembrane transport
BJF97_RS12845	COG1473	amidohydrolase
BJF97_RS12855	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BJF97_RS12860	COG1842	Phage shock protein A
BJF97_RS12870	COG1983	PspC domain protein
BJF97_RS12880	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BJF97_RS12885	COG3106	COG3106 Predicted ATPase
BJF97_RS12900	COG3180	Ammonia monooxygenase
BJF97_RS12905	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BJF97_RS12910	COG4948	Mandelate Racemase Muconate Lactonizing
BJF97_RS12915	COG2866	Carboxypeptidase
BJF97_RS12920	COG4166	transmembrane transport
BJF97_RS12935	COG2011	ABC-type metal ion transport system permease component
BJF97_RS12940	COG1464	Belongs to the NlpA lipoprotein family
BJF97_RS12945	COG2814	Major facilitator Superfamily
BJF97_RS12960	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BJF97_RS12975	COG2188	Transcriptional regulator
BJF97_RS12980	COG0511	ligase activity, forming carbon-carbon bonds
BJF97_RS12985	COG0439	Biotin carboxylase
BJF97_RS12990	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BJF97_RS12995	COG0697	spore germination
BJF97_RS13005	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BJF97_RS13010	COG1984	allophanate hydrolase subunit 2
BJF97_RS13015	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
BJF97_RS13020	COG0436	Aminotransferase
BJF97_RS13035	COG4221	oxidoreductase activity
BJF97_RS13040	COG0765	amino acid transport
BJF97_RS13045	COG0765	amino acid transport
BJF97_RS13055	COG1605	Chorismate mutase
BJF97_RS13060	COG0693	protein deglycase activity
BJF97_RS13160	COG3507	Belongs to the glycosyl hydrolase 43 family
BJF97_RS13165	COG2211	Major facilitator Superfamily
BJF97_RS13170	COG4580	involved in the transport of maltose and maltodextrins
BJF97_RS13175	COG3272	Protein of unknown function (DUF1722)
BJF97_RS13185	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BJF97_RS13200	COG0300	oxidoreductase activity
BJF97_RS13235	COG0583	DNA-binding transcription factor activity
BJF97_RS13245	COG0300	oxidoreductase activity
BJF97_RS13265	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
BJF97_RS13265	COG2885	chlorophyll binding
BJF97_RS13270	COG3477	response to acidic pH
BJF97_RS13290	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BJF97_RS13295	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BJF97_RS13300	COG0673	inositol 2-dehydrogenase activity
BJF97_RS13305	COG1349	DNA-binding transcription factor activity
BJF97_RS13320	COG0513	Belongs to the DEAD box helicase family
BJF97_RS13340	COG0589	response to stress
BJF97_RS13350	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BJF97_RS13355	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BJF97_RS13355	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
BJF97_RS13355	COG1013	pyruvate-flavodoxin oxidoreductase activity
BJF97_RS13355	COG0674	pyruvate-flavodoxin oxidoreductase activity
BJF97_RS13385	COG3042	response to heat
BJF97_RS13390	COG3187	Heat shock protein
BJF97_RS13395	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BJF97_RS13400	COG0586	Pfam SNARE associated Golgi protein
BJF97_RS13405	COG2911	Protein conserved in bacteria
BJF97_RS13415	COG3784	Protein of unknown function (DUF1318)
BJF97_RS13420	COG2207	Transcriptional regulator
BJF97_RS13425	COG1012	belongs to the aldehyde dehydrogenase family
BJF97_RS13440	COG5285	phytanoyl-CoA dioxygenase
BJF97_RS13445	COG1126	abc transporter atp-binding protein
BJF97_RS13450	COG0583	DNA-binding transcription factor activity
BJF97_RS13455	COG2072	flavoprotein involved in K transport
BJF97_RS13485	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BJF97_RS13510	COG1566	PFAM secretion protein HlyD family protein
BJF97_RS13525	COG2207	Transcriptional regulator
BJF97_RS13530	COG2207	Transcriptional regulator
BJF97_RS13530	COG3708	Transcriptional regulator
BJF97_RS13535	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BJF97_RS13550	COG0406	alpha-ribazole phosphatase activity
BJF97_RS13555	COG2378	regulation of single-species biofilm formation
BJF97_RS13560	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS13570	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BJF97_RS13575	COG2162	N-hydroxyarylamine O-acetyltransferase activity
BJF97_RS13600	COG0583	DNA-binding transcription factor activity
BJF97_RS13610	COG0583	DNA-binding transcription factor activity
BJF97_RS13630	COG1012	belongs to the aldehyde dehydrogenase family
BJF97_RS13630	COG2030	dehydratase
BJF97_RS13635	COG3396	Phenylacetate-CoA oxygenase
BJF97_RS13640	COG3460	Phenylacetate-CoA oxygenase
BJF97_RS13645	COG3396	Phenylacetate-CoA oxygenase
BJF97_RS13650	COG2151	metal-sulfur cluster biosynthetic enzyme
BJF97_RS13655	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BJF97_RS13660	COG1024	Enoyl-CoA hydratase
BJF97_RS13665	COG1024	Enoyl-CoA hydratase
BJF97_RS13670	COG1250	3-hydroxyacyl-CoA dehydrogenase
BJF97_RS13675	COG2050	protein possibly involved in aromatic compounds catabolism
BJF97_RS13680	COG0183	Belongs to the thiolase family
BJF97_RS13685	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
BJF97_RS13690	COG3327	negative regulation of DNA-templated transcription, initiation
BJF97_RS13695	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BJF97_RS13710	COG1643	Atp-dependent helicase
BJF97_RS13715	COG4122	O-methyltransferase activity
BJF97_RS13720	COG1538	Outer membrane efflux protein
BJF97_RS13740	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BJF97_RS13745	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BJF97_RS13750	COG1012	belongs to the aldehyde dehydrogenase family
BJF97_RS13755	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BJF97_RS13760	COG0456	acetyltransferase
BJF97_RS13765	COG0583	DNA-binding transcription factor activity
BJF97_RS13770	COG3706	GGDEF domain
BJF97_RS13790	COG3038	cytochrome b561
BJF97_RS13815	COG0583	DNA-binding transcription factor activity
BJF97_RS13820	COG3485	protocatechuate 3,4-dioxygenase
BJF97_RS13825	COG3485	protocatechuate 3,4-dioxygenase
BJF97_RS13830	COG5383	Protein conserved in bacteria
BJF97_RS13835	COG2272	Belongs to the type-B carboxylesterase lipase family
BJF97_RS13845	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BJF97_RS13850	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BJF97_RS13855	COG1275	C4-dicarboxylate transporter malic acid transport protein
BJF97_RS13860	COG0500	methyltransferase
BJF97_RS13865	COG2195	Cleaves the N-terminal amino acid of tripeptides
BJF97_RS13870	COG0747	negative chemotaxis
BJF97_RS13880	COG0697	spore germination
BJF97_RS13885	COG2207	Transcriptional regulator
BJF97_RS13890	COG3135	benzoate transporter
BJF97_RS13895	COG1396	sequence-specific DNA binding
BJF97_RS13900	COG0826	peptidase U32
BJF97_RS13915	COG1294	oxidase, subunit
BJF97_RS13920	COG1271	oxidase subunit
BJF97_RS13925	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BJF97_RS13935	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BJF97_RS13940	COG3842	ATPase activity
BJF97_RS13945	COG1176	ABC-type spermidine putrescine transport system, permease component I
BJF97_RS13950	COG1177	transmembrane transport
BJF97_RS13955	COG1012	belongs to the aldehyde dehydrogenase family
BJF97_RS13975	COG0596	Alpha beta hydrolase
BJF97_RS13980	COG4677	pectinesterase activity
BJF97_RS13985	COG1012	belongs to the aldehyde dehydrogenase family
BJF97_RS13990	COG0747	negative chemotaxis
BJF97_RS14025	COG0582	viral genome integration into host DNA
BJF97_RS14030	COG3238	Protein conserved in bacteria
BJF97_RS14035	COG1247	-acetyltransferase
BJF97_RS14050	COG2130	NADP-dependent
BJF97_RS14060	COG3691	Protein conserved in bacteria
BJF97_RS14065	COG4772	TonB-dependent receptor
BJF97_RS14090	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJF97_RS14095	COG1473	amidohydrolase
BJF97_RS14100	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJF97_RS14105	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BJF97_RS14120	COG1126	abc transporter atp-binding protein
BJF97_RS14130	COG2271	Major facilitator Superfamily
BJF97_RS14140	COG1609	Transcriptional regulator
BJF97_RS14145	COG0625	glutathione transferase activity
BJF97_RS14170	COG2211	Major facilitator Superfamily
BJF97_RS14180	COG4977	sequence-specific DNA binding
BJF97_RS14185	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BJF97_RS14190	COG3842	ATPase activity
BJF97_RS14195	COG1840	ABC-type Fe3 transport system, periplasmic component
BJF97_RS14200	COG1178	ABC-type Fe3 transport system permease component
BJF97_RS14205	COG2162	N-hydroxyarylamine O-acetyltransferase activity
BJF97_RS14210	COG2181	nitrate reductase activity
BJF97_RS14215	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
BJF97_RS14220	COG1140	nitrate reductase beta subunit
BJF97_RS14225	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BJF97_RS14245	COG0697	spore germination
BJF97_RS14255	COG3383	formate dehydrogenase (NAD+) activity
BJF97_RS14255	COG0243	molybdopterin cofactor binding
BJF97_RS14260	COG3383	formate dehydrogenase (NAD+) activity
BJF97_RS14260	COG0243	molybdopterin cofactor binding
BJF97_RS14265	COG0437	4 iron, 4 sulfur cluster binding
BJF97_RS14270	COG2864	formate dehydrogenase
BJF97_RS14285	COG2814	Major facilitator Superfamily
BJF97_RS14295	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJF97_RS14305	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BJF97_RS14315	COG0747	negative chemotaxis
BJF97_RS14325	COG1064	alcohol dehydrogenase
BJF97_RS14340	COG0488	(ABC) transporter
BJF97_RS14370	COG1764	response to oxidative stress
BJF97_RS14385	COG3781	membrane
BJF97_RS14390	COG0243	molybdopterin cofactor binding
BJF97_RS14395	COG1280	lysine exporter protein (LysE YggA)
BJF97_RS14405	COG0583	DNA-binding transcription factor activity
BJF97_RS14410	COG0583	DNA-binding transcription factor activity
BJF97_RS14420	COG2271	Major facilitator Superfamily
BJF97_RS14460	COG1280	lysine exporter protein (LysE YggA)
BJF97_RS14485	COG1116	anion transmembrane transporter activity
BJF97_RS14485	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BJF97_RS14500	COG0439	Biotin carboxylase
BJF97_RS14515	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BJF97_RS14515	COG0519	Catalyzes the synthesis of GMP from XMP
BJF97_RS14530	COG0076	glutamate decarboxylase activity
BJF97_RS14535	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BJF97_RS14540	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BJF97_RS14545	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BJF97_RS14550	COG1116	anion transmembrane transporter activity
BJF97_RS14555	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BJF97_RS14560	COG0673	inositol 2-dehydrogenase activity
BJF97_RS14565	COG1082	Xylose isomerase domain protein TIM barrel
BJF97_RS14570	COG1609	Transcriptional regulator
BJF97_RS14610	COG1649	PFAM Uncharacterised BCR, COG1649
BJF97_RS14615	COG2771	luxR family
BJF97_RS14615	COG2200	EAL domain
BJF97_RS14620	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BJF97_RS14630	COG0401	homolog of Blt101
BJF97_RS14640	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS14650	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BJF97_RS14665	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BJF97_RS14670	COG0508	dehydrogenase complex catalyzes the overall conversion of
BJF97_RS14675	COG0022	dehydrogenase e1 component
BJF97_RS14680	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BJF97_RS14750	COG2801	Transposase and inactivated derivatives
BJF97_RS14770	COG2801	Transposase and inactivated derivatives
BJF97_RS14775	COG2801	Transposase and inactivated derivatives
BJF97_RS14795	COG1760	l-serine dehydratase
BJF97_RS14800	COG0814	amino acid
BJF97_RS14830	COG2814	Major facilitator Superfamily
BJF97_RS14835	COG1132	(ABC) transporter
BJF97_RS14840	COG2375	cellular response to nickel ion
BJF97_RS14840	COG1132	(ABC) transporter
BJF97_RS14850	COG3433	isochorismatase activity
BJF97_RS14850	COG2226	methyltransferase
BJF97_RS14850	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BJF97_RS14870	COG1021	2,3-dihydroxybenzoate-AMP ligase
BJF97_RS14875	COG4771	TonB-dependent receptor
BJF97_RS14880	COG1652	LysM domain
BJF97_RS14935	COG1609	Transcriptional regulator
BJF97_RS14945	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJF97_RS14960	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BJF97_RS14970	COG4771	TonB-dependent receptor
BJF97_RS14975	COG3391	amine dehydrogenase activity
BJF97_RS15005	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BJF97_RS15055	COG4821	SIS domain
BJF97_RS15070	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS15095	COG2841	Protein conserved in bacteria
BJF97_RS15120	COG0583	DNA-binding transcription factor activity
BJF97_RS15125	COG0412	Dienelactone hydrolase
BJF97_RS15140	COG0693	protein deglycase activity
BJF97_RS15150	COG1609	Transcriptional regulator
BJF97_RS15160	COG1129	ABC transporter
BJF97_RS15165	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJF97_RS15190	COG1070	Carbohydrate kinase
BJF97_RS15195	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS15200	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BJF97_RS15205	COG3775	system Galactitol-specific IIC component
BJF97_RS15225	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BJF97_RS15230	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BJF97_RS15235	COG1120	ATPase activity
BJF97_RS15250	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BJF97_RS15255	COG1446	asparaginase
BJF97_RS15260	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BJF97_RS15270	COG2207	Transcriptional regulator
BJF97_RS15275	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BJF97_RS15295	COG0765	amino acid transport
BJF97_RS15300	COG0765	amino acid transport
BJF97_RS15305	COG1126	abc transporter atp-binding protein
BJF97_RS15320	COG4628	conserved protein (DUF2132)
BJF97_RS15340	COG2011	ABC-type metal ion transport system permease component
BJF97_RS15355	COG0477	Major facilitator Superfamily
BJF97_RS15390	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BJF97_RS15395	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BJF97_RS15445	COG2199	diguanylate cyclase activity
BJF97_RS15460	COG1012	belongs to the aldehyde dehydrogenase family
BJF97_RS15465	COG0583	DNA-binding transcription factor activity
BJF97_RS15475	COG0039	L-malate dehydrogenase activity
BJF97_RS15515	COG0697	spore germination
BJF97_RS15520	COG2814	Major facilitator Superfamily
BJF97_RS15555	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BJF97_RS15590	COG2200	EAL domain
BJF97_RS15610	COG2223	nitrite transmembrane transporter activity
BJF97_RS15615	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BJF97_RS15640	COG3122	Protein conserved in bacteria
BJF97_RS15665	COG0339	signal peptide processing
BJF97_RS15670	COG4221	oxidoreductase activity
BJF97_RS15675	COG1802	Transcriptional regulator
BJF97_RS15680	COG0589	response to stress
BJF97_RS15685	COG0246	Mannitol dehydrogenase
BJF97_RS15690	COG0477	Major facilitator Superfamily
BJF97_RS15695	COG1063	alcohol dehydrogenase
BJF97_RS15700	COG4948	Mandelate Racemase Muconate Lactonizing
BJF97_RS15715	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BJF97_RS15735	COG0437	4 iron, 4 sulfur cluster binding
BJF97_RS15740	COG3302	dmso reductase anchor subunit
BJF97_RS15745	COG3381	protein complex oligomerization
BJF97_RS15755	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BJF97_RS15760	COG1940	carbohydrate kinase activity
BJF97_RS15765	COG0583	DNA-binding transcription factor activity
BJF97_RS15770	COG2814	Major facilitator Superfamily
BJF97_RS15775	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BJF97_RS15785	COG3591	Belongs to the peptidase S1B family
BJF97_RS15805	COG0628	permease
BJF97_RS15835	COG0679	Auxin Efflux Carrier
BJF97_RS15845	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BJF97_RS15860	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BJF97_RS15865	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS15875	COG3290	protein histidine kinase activity
BJF97_RS15880	COG4565	transcriptional regulatory protein
BJF97_RS15900	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
BJF97_RS15900	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
BJF97_RS15905	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BJF97_RS15910	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BJF97_RS15920	COG0183	Belongs to the thiolase family
BJF97_RS15925	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BJF97_RS15935	COG1414	Transcriptional regulator
BJF97_RS15940	COG2840	Smr protein MutS2
BJF97_RS15945	COG0583	DNA-binding transcription factor activity
BJF97_RS15955	COG1473	amidohydrolase
BJF97_RS15960	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
BJF97_RS15965	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BJF97_RS15970	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BJF97_RS15975	COG0589	response to stress
BJF97_RS15985	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
BJF97_RS15990	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
BJF97_RS16000	COG0531	amino acid
BJF97_RS16010	COG3136	membrane protein required for alginate biosynthesis
BJF97_RS16020	COG0745	RESPONSE REGULATOR receiver
BJF97_RS16035	COG2205	protein histidine kinase activity
BJF97_RS16045	COG0114	fumarate hydratase activity
BJF97_RS16050	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
BJF97_RS16050	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
BJF97_RS16055	COG1482	cell wall glycoprotein biosynthetic process
BJF97_RS16060	COG5339	Protein conserved in bacteria
BJF97_RS16070	COG1263	PTS System
BJF97_RS16070	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BJF97_RS16075	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BJF97_RS16085	COG2391	methyltransferase activity
BJF97_RS16090	COG0425	Belongs to the sulfur carrier protein TusA family
BJF97_RS16105	COG0673	inositol 2-dehydrogenase activity
BJF97_RS16115	COG2723	6-phospho-beta-galactosidase activity
BJF97_RS16150	COG4659	FMN binding
BJF97_RS16160	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BJF97_RS16170	COG0625	glutathione transferase activity
BJF97_RS16190	COG3895	Periplasmic Protein
BJF97_RS16205	COG3706	GGDEF domain
BJF97_RS16220	COG1566	PFAM secretion protein HlyD family protein
BJF97_RS16225	COG1289	transmembrane transporter activity
BJF97_RS16235	COG4989	oxidoreductase activity
BJF97_RS16240	COG3313	Fe-S protein
BJF97_RS16245	COG1309	transcriptional regulator
BJF97_RS16250	COG1902	pentaerythritol trinitrate reductase activity
BJF97_RS16255	COG0346	lactoylglutathione lyase activity
BJF97_RS16265	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
BJF97_RS16270	COG0791	NLP P60 protein
BJF97_RS16280	COG2814	Major facilitator Superfamily
BJF97_RS16290	COG0583	DNA-binding transcription factor activity
BJF97_RS16295	COG2814	Major facilitator Superfamily
BJF97_RS16300	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BJF97_RS16305	COG0307	riboflavin synthase, alpha
BJF97_RS16330	COG3729	General stress protein
BJF97_RS16335	COG3685	Protein conserved in bacteria
BJF97_RS16340	COG3685	Protein conserved in bacteria
BJF97_RS16345	COG3546	catalase activity
BJF97_RS16350	COG1271	oxidase subunit
BJF97_RS16355	COG1294	oxidase, subunit
BJF97_RS16370	COG1546	Belongs to the CinA family
BJF97_RS16375	COG2323	membrane
BJF97_RS16390	COG4529	Protein conserved in bacteria
BJF97_RS16395	COG3111	PFAM Bacterial OB fold (BOF) protein
BJF97_RS16400	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS16405	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BJF97_RS16420	COG1349	DNA-binding transcription factor activity
BJF97_RS16425	COG0346	lactoylglutathione lyase activity
BJF97_RS16435	COG4166	transmembrane transport
BJF97_RS16450	COG0444	Belongs to the ABC transporter superfamily
BJF97_RS16460	COG4993	Dehydrogenase
BJF97_RS16465	COG0582	viral genome integration into host DNA
BJF97_RS16475	COG3121	Chaperone
BJF97_RS16490	COG3539	Fimbrial protein
BJF97_RS16495	COG0582	viral genome integration into host DNA
BJF97_RS16515	COG1278	Cold shock
BJF97_RS16545	COG1175	transmembrane transport
BJF97_RS16610	COG3328	transposase activity
BJF97_RS16675	COG2885	chlorophyll binding
BJF97_RS16700	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BJF97_RS16705	COG3383	formate dehydrogenase (NAD+) activity
BJF97_RS16710	COG1473	amidohydrolase
BJF97_RS16720	COG1126	abc transporter atp-binding protein
BJF97_RS16725	COG0765	amino acid transport
BJF97_RS16745	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BJF97_RS16755	COG1120	ATPase activity
BJF97_RS16760	COG4774	siderophore transport
BJF97_RS16765	COG1116	anion transmembrane transporter activity
BJF97_RS16770	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BJF97_RS16785	COG1960	acyl-CoA dehydrogenase activity
BJF97_RS16790	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJF97_RS16820	COG2814	Major facilitator Superfamily
BJF97_RS16855	COG1414	Transcriptional regulator
BJF97_RS16860	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BJF97_RS16865	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BJF97_RS16870	COG1120	ATPase activity
BJF97_RS16880	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BJF97_RS16885	COG2271	Major facilitator Superfamily
BJF97_RS16890	COG3185	4-Hydroxyphenylpyruvate dioxygenase
BJF97_RS16890	COG1082	Xylose isomerase domain protein TIM barrel
BJF97_RS16915	COG1376	ErfK ybiS ycfS ynhG family protein
BJF97_RS16930	COG0719	Fe-S assembly protein
BJF97_RS16935	COG0396	ATPase activity
BJF97_RS16940	COG0719	Fe-S assembly protein
BJF97_RS16945	COG0316	Belongs to the HesB IscA family
BJF97_RS16950	COG3539	Fimbrial protein
BJF97_RS16965	COG3121	Chaperone
BJF97_RS16980	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BJF97_RS16985	COG2261	transglycosylase associated protein
BJF97_RS16990	COG2050	protein possibly involved in aromatic compounds catabolism
BJF97_RS16995	COG0277	FAD linked oxidase domain protein
BJF97_RS16995	COG0247	lactate metabolic process
BJF97_RS17000	COG0628	permease
BJF97_RS17010	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BJF97_RS17010	COG0574	Belongs to the PEP-utilizing enzyme family
BJF97_RS17020	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BJF97_RS17025	COG4256	Hemin uptake protein
BJF97_RS17035	COG0791	NLP P60 protein
BJF97_RS17045	COG0386	Belongs to the glutathione peroxidase family
BJF97_RS17065	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BJF97_RS17065	COG0072	phenylalanine-tRNA ligase activity
BJF97_RS17075	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BJF97_RS17100	COG3137	Salt-induced outer membrane protein
BJF97_RS17105	COG1105	Belongs to the carbohydrate kinase PfkB family
BJF97_RS17115	COG3001	Fructosamine kinase
BJF97_RS17125	COG2350	Protein conserved in bacteria
BJF97_RS17130	COG1902	pentaerythritol trinitrate reductase activity
BJF97_RS17150	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BJF97_RS17160	COG0444	Belongs to the ABC transporter superfamily
BJF97_RS17165	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BJF97_RS17170	COG0601	transmembrane transport
BJF97_RS17180	COG2095	MarC family integral membrane protein
BJF97_RS17185	COG1454	alcohol dehydrogenase
BJF97_RS17185	COG1012	belongs to the aldehyde dehydrogenase family
BJF97_RS17205	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BJF97_RS17210	COG0745	RESPONSE REGULATOR receiver
BJF97_RS17215	COG1752	Esterase of the alpha-beta hydrolase superfamily
BJF97_RS17225	COG0788	formyltetrahydrofolate deformylase activity
BJF97_RS17260	COG2181	nitrate reductase activity
BJF97_RS17265	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
BJF97_RS17270	COG1140	nitrate reductase beta subunit
BJF97_RS17275	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BJF97_RS17280	COG2223	nitrite transmembrane transporter activity
BJF97_RS17285	COG3850	Histidine kinase
BJF97_RS17290	COG2197	response regulator
BJF97_RS17295	COG4932	domain protein
BJF97_RS17300	COG0243	molybdopterin cofactor binding
BJF97_RS17305	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BJF97_RS17305	COG2146	nitrite reductase [NAD(P)H] activity
BJF97_RS17310	COG1116	anion transmembrane transporter activity
BJF97_RS17320	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BJF97_RS17325	COG3707	response regulator
BJF97_RS17330	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
BJF97_RS17340	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
BJF97_RS17345	COG4572	Cation transport regulator
BJF97_RS17350	COG0387	Pfam Sodium calcium exchanger
BJF97_RS17370	COG2890	protein-(glutamine-N5) methyltransferase activity
BJF97_RS17400	COG0659	secondary active sulfate transmembrane transporter activity
BJF97_RS17420	COG0012	GTP binding
BJF97_RS17425	COG0582	viral genome integration into host DNA
BJF97_RS17435	COG3829	transcription factor binding
BJF97_RS17440	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BJF97_RS17445	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BJF97_RS17450	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BJF97_RS17460	COG0549	Belongs to the carbamate kinase family
BJF97_RS17465	COG3608	succinylglutamate desuccinylase aspartoacylase
BJF97_RS17465	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
BJF97_RS17470	COG0493	'glutamate synthase
BJF97_RS17470	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BJF97_RS17475	COG0402	S-adenosylhomocysteine deaminase activity
BJF97_RS17480	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BJF97_RS17485	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BJF97_RS17485	COG0493	'glutamate synthase
BJF97_RS17490	COG2233	PERMEase
BJF97_RS17495	COG3383	formate dehydrogenase (NAD+) activity
BJF97_RS17500	COG3383	formate dehydrogenase (NAD+) activity
BJF97_RS17505	COG2068	MobA-Related Protein
BJF97_RS17520	COG2814	Major facilitator Superfamily
BJF97_RS17525	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS17525	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS17530	COG2351	hydroxyisourate hydrolase activity
BJF97_RS17550	COG0583	DNA-binding transcription factor activity
BJF97_RS17555	COG0564	pseudouridine synthase activity
BJF97_RS17570	COG1174	glycine betaine transport
BJF97_RS17580	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJF97_RS17595	COG2814	Major facilitator Superfamily
BJF97_RS17620	COG2308	Evidence 4 Homologs of previously reported genes of
BJF97_RS17630	COG1472	Belongs to the glycosyl hydrolase 3 family
BJF97_RS17640	COG2211	Major facilitator Superfamily
BJF97_RS17655	COG1619	proteins homologs of microcin C7 resistance protein MccF
BJF97_RS17675	COG2719	SpoVR family
BJF97_RS17705	COG0179	Fumarylacetoacetate (FAA) hydrolase
BJF97_RS17720	COG2894	cell division
BJF97_RS17730	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
BJF97_RS17740	COG3065	identical protein binding
BJF97_RS17745	COG1214	PFAM Peptidase M22, glycoprotease
BJF97_RS17750	COG1199	ATP-dependent helicase activity
BJF97_RS17755	COG0251	oxidation-reduction process
BJF97_RS17765	COG3842	ATPase activity
BJF97_RS17770	COG0395	ABC-type sugar transport system, permease component
BJF97_RS17775	COG1175	transmembrane transport
BJF97_RS17780	COG1653	transport
BJF97_RS17810	COG1760	l-serine dehydratase
BJF97_RS17815	COG2200	EAL domain
BJF97_RS17820	COG1253	flavin adenine dinucleotide binding
BJF97_RS17825	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BJF97_RS17825	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS17830	COG3715	PTS system
BJF97_RS17835	COG3716	PTS system mannose fructose sorbose family IID component
BJF97_RS17855	COG2226	methyltransferase
BJF97_RS17860	COG0768	penicillin binding
BJF97_RS17885	COG1414	Transcriptional regulator
BJF97_RS17890	COG2814	Major facilitator Superfamily
BJF97_RS17915	COG1956	GAF domain-containing protein
BJF97_RS17920	COG2995	paraquat-inducible protein a
BJF97_RS17925	COG3008	intermembrane lipid transfer
BJF97_RS17950	COG2990	Protein conserved in bacteria
BJF97_RS17990	COG1276	copper resistance
BJF97_RS17995	COG2372	response to copper ion
BJF97_RS18005	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BJF97_RS18010	COG1770	oligopeptidase
BJF97_RS18015	COG2979	Protein of unknown function (DUF533)
BJF97_RS18020	COG3141	response to X-ray
BJF97_RS18030	COG0800	Aldolase
BJF97_RS18035	COG0129	dihydroxy-acid dehydratase activity
BJF97_RS18040	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BJF97_RS18045	COG1737	Transcriptional regulator
BJF97_RS18055	COG3493	citrate carrier protein
BJF97_RS18060	COG0679	Auxin Efflux Carrier
BJF97_RS18065	COG0281	malic enzyme
BJF97_RS18075	COG1560	Kdo2-lipid A biosynthetic process
BJF97_RS18080	COG0739	heme binding
BJF97_RS18085	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
BJF97_RS18095	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BJF97_RS18115	COG0217	transcriptional regulatory protein
BJF97_RS18120	COG0494	nUDIX hydrolase
BJF97_RS18130	COG1335	isochorismatase
BJF97_RS18135	COG1801	Protein of unknown function DUF72
BJF97_RS18140	COG3788	relative of glutathione S-transferase, MAPEG superfamily
BJF97_RS18160	COG3102	Protein conserved in bacteria
BJF97_RS18170	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
BJF97_RS18195	COG1172	Belongs to the binding-protein-dependent transport system permease family
BJF97_RS18205	COG1879	ABC-type sugar transport system periplasmic component
BJF97_RS18215	COG1528	Iron-storage protein
BJF97_RS18230	COG0477	Major facilitator Superfamily
BJF97_RS18240	COG1528	Iron-storage protein
BJF97_RS18250	COG0814	amino acid
BJF97_RS18255	COG3318	Belongs to the UPF0149 family
BJF97_RS18255	COG3012	SEC-C Motif Domain Protein
BJF97_RS18260	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BJF97_RS18290	COG2197	response regulator
BJF97_RS18300	COG2197	response regulator
BJF97_RS18305	COG1126	abc transporter atp-binding protein
BJF97_RS18310	COG0765	amino acid transport
BJF97_RS18320	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BJF97_RS18325	COG0366	Alpha amylase catalytic
BJF97_RS18355	COG5475	Uncharacterized small protein (DUF2158)
BJF97_RS18360	COG2354	Protein conserved in bacteria
BJF97_RS18365	COG0697	spore germination
BJF97_RS18370	COG3727	T/G mismatch-specific endonuclease activity
BJF97_RS18375	COG0270	DNA (cytosine-5-)-methyltransferase activity
BJF97_RS18380	COG1418	mRNA catabolic process
BJF97_RS18390	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BJF97_RS18400	COG0463	Glycosyl transferase, family 2
BJF97_RS18425	COG0582	viral genome integration into host DNA
BJF97_RS18430	COG1662	PFAM IS1 transposase
BJF97_RS18445	COG3335	DDE superfamily endonuclease
BJF97_RS18460	COG2814	Major facilitator Superfamily
BJF97_RS18515	COG3736	Type IV secretory pathway, component VirB8
BJF97_RS18520	COG3504	Conjugal transfer protein
BJF97_RS18530	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
BJF97_RS18580	COG0084	hydrolase, TatD family'
BJF97_RS18590	COG3328	transposase activity
BJF97_RS18660	COG0251	oxidation-reduction process
BJF97_RS18680	COG2819	hydrolase of the alpha beta superfamily
BJF97_RS18690	COG0589	response to stress
BJF97_RS18700	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BJF97_RS18730	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BJF97_RS18740	COG0534	Mate efflux family protein
BJF97_RS18780	COG0583	DNA-binding transcription factor activity
BJF97_RS18785	COG0667	Aldo Keto reductase
BJF97_RS18800	COG1376	ErfK ybiS ycfS ynhG family protein
BJF97_RS18820	COG0582	viral genome integration into host DNA
BJF97_RS18825	COG2207	Transcriptional regulator
BJF97_RS18825	COG3708	Transcriptional regulator
BJF97_RS18830	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BJF97_RS18835	COG1845	cytochrome c oxidase, subunit III
BJF97_RS18840	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BJF97_RS18845	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BJF97_RS18850	COG2814	Major facilitator Superfamily
BJF97_RS18855	COG1566	PFAM secretion protein HlyD family protein
BJF97_RS18900	COG3451	type IV secretory pathway VirB4
BJF97_RS18925	COG3504	Conjugal transfer protein
BJF97_RS18935	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
BJF97_RS18950	COG4227	nucleotidyltransferase activity
BJF97_RS18980	COG3621	Patatin-like phospholipase
BJF97_RS19020	COG3539	Fimbrial protein
BJF97_RS19025	COG3121	Chaperone
BJF97_RS19030	COG3188	usher protein
BJF97_RS19035	COG3539	Fimbrial protein
BJF97_RS19040	COG3539	Fimbrial protein
BJF97_RS19045	COG3539	Fimbrial protein
BJF97_RS19055	COG0583	DNA-binding transcription factor activity
BJF97_RS19060	COG1942	4-Oxalocrotonate Tautomerase
BJF97_RS19070	COG1082	Xylose isomerase domain protein TIM barrel
BJF97_RS19075	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS19075	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS19080	COG0673	inositol 2-dehydrogenase activity
BJF97_RS19085	COG2814	Major facilitator Superfamily
BJF97_RS19095	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
BJF97_RS19115	COG1289	transmembrane transporter activity
BJF97_RS19135	COG2925	Exonuclease
BJF97_RS19140	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BJF97_RS19145	COG0640	Transcriptional regulator
BJF97_RS19230	COG2205	protein histidine kinase activity
BJF97_RS19235	COG3604	Transcriptional regulator
BJF97_RS19250	COG0531	amino acid
BJF97_RS19255	COG0583	DNA-binding transcription factor activity
BJF97_RS19260	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BJF97_RS19270	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BJF97_RS19285	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BJF97_RS19295	COG0107	imidazoleglycerol-phosphate synthase activity
BJF97_RS19315	COG1215	transferase activity, transferring glycosyl groups
BJF97_RS19365	COG1091	dTDP-4-dehydrorhamnose reductase activity
BJF97_RS19375	COG1088	dTDP-glucose 4,6-dehydratase activity
BJF97_RS19385	COG2244	polysaccharide biosynthetic process
BJF97_RS19400	COG0463	Glycosyl transferase, family 2
BJF97_RS19440	COG1253	flavin adenine dinucleotide binding
BJF97_RS19445	COG2982	Protein involved in outer membrane biogenesis
BJF97_RS19460	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BJF97_RS19465	COG0443	Heat shock 70 kDa protein
BJF97_RS19470	COG0372	Belongs to the citrate synthase family
BJF97_RS19475	COG2205	protein histidine kinase activity
BJF97_RS19490	COG1301	dicarboxylic acid transport
BJF97_RS19500	COG4608	Belongs to the ABC transporter superfamily
BJF97_RS19505	COG0444	Belongs to the ABC transporter superfamily
BJF97_RS19510	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BJF97_RS19515	COG0601	transmembrane transport
BJF97_RS19530	COG2267	carboxylic ester hydrolase activity
BJF97_RS19540	COG1522	sequence-specific DNA binding
BJF97_RS19555	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BJF97_RS19585	COG2205	protein histidine kinase activity
BJF97_RS19590	COG0745	RESPONSE REGULATOR receiver
BJF97_RS19595	COG0826	peptidase U32
BJF97_RS19615	COG4608	Belongs to the ABC transporter superfamily
BJF97_RS19620	COG0444	Belongs to the ABC transporter superfamily
BJF97_RS19625	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BJF97_RS19630	COG0601	transmembrane transport
BJF97_RS19635	COG0747	negative chemotaxis
BJF97_RS19640	COG4948	Mandelate Racemase Muconate Lactonizing
BJF97_RS19645	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BJF97_RS19655	COG1070	Carbohydrate kinase
BJF97_RS19685	COG1830	Aldolase
BJF97_RS19690	COG0351	phosphomethylpyrimidine kinase
BJF97_RS19700	COG2015	COG2015, Alkyl sulfatase and related hydrolases
BJF97_RS19710	COG0583	DNA-binding transcription factor activity
BJF97_RS19720	COG2252	PERMEase
BJF97_RS19725	COG0583	DNA-binding transcription factor activity
BJF97_RS19730	COG5455	response to cobalt ion
BJF97_RS19750	COG4808	Protein conserved in bacteria
BJF97_RS19755	COG4807	Protein conserved in bacteria
BJF97_RS19765	COG3275	phosphorelay sensor kinase activity
BJF97_RS19770	COG0789	Transcriptional regulator
BJF97_RS19775	COG1174	glycine betaine transport
BJF97_RS19780	COG1125	glycine betaine transport
BJF97_RS19785	COG1174	glycine betaine transport
BJF97_RS19790	COG1732	Glycine betaine
BJF97_RS19795	COG1472	Belongs to the glycosyl hydrolase 3 family
BJF97_RS19800	COG0277	FAD linked oxidase domain protein
BJF97_RS19810	COG1686	Belongs to the peptidase S11 family
BJF97_RS19825	COG0586	Pfam SNARE associated Golgi protein
BJF97_RS19830	COG1538	Outer membrane efflux protein
BJF97_RS19835	COG2226	methyltransferase
BJF97_RS19840	COG2723	6-phospho-beta-galactosidase activity
BJF97_RS19855	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BJF97_RS19860	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BJF97_RS19865	COG0625	glutathione transferase activity
BJF97_RS19880	COG2271	Major facilitator Superfamily
BJF97_RS19885	COG0583	DNA-binding transcription factor activity
BJF97_RS19895	COG1346	cytolysis
BJF97_RS19905	COG2949	membrane
BJF97_RS19915	COG1129	ABC transporter
BJF97_RS19930	COG2311	Membrane
BJF97_RS19945	COG4771	TonB-dependent receptor
BJF97_RS19950	COG0833	amino acid
BJF97_RS19955	COG0583	DNA-binding transcription factor activity
BJF97_RS19960	COG2855	membrane
BJF97_RS19970	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BJF97_RS19970	COG1522	sequence-specific DNA binding
BJF97_RS19975	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BJF97_RS19980	COG2313	pseudouridylate synthase activity
BJF97_RS19985	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BJF97_RS19990	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BJF97_RS19990	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
BJF97_RS19990	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BJF97_RS19995	COG1105	Belongs to the carbohydrate kinase PfkB family
BJF97_RS20000	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS20000	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS20005	COG2814	Major facilitator Superfamily
BJF97_RS20015	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BJF97_RS20020	COG0246	Mannitol dehydrogenase
BJF97_RS20025	COG0523	cobalamin synthesis protein
BJF97_RS20030	COG0671	phosphoesterase, PA-phosphatase related
BJF97_RS20035	COG0791	NLP P60 protein
BJF97_RS20040	COG2200	EAL domain
BJF97_RS20045	COG4166	transmembrane transport
BJF97_RS20050	COG4174	ABC transporter (Permease)
BJF97_RS20055	COG4239	(ABC) transporter, permease
BJF97_RS20060	COG4172	Belongs to the ABC transporter superfamily
BJF97_RS20070	COG2814	Major facilitator Superfamily
BJF97_RS20075	COG1187	pseudouridine synthase activity
BJF97_RS20080	COG1061	Type III restriction enzyme res subunit
BJF97_RS20090	COG0494	nUDIX hydrolase
BJF97_RS20095	COG1349	DNA-binding transcription factor activity
BJF97_RS20175	COG1388	LysM domain
BJF97_RS20175	COG3858	chitin binding
BJF97_RS20235	COG0628	permease
BJF97_RS20250	COG0659	secondary active sulfate transmembrane transporter activity
BJF97_RS20255	COG2239	Acts as a magnesium transporter
BJF97_RS20260	COG4615	Cyclic peptide transporter
BJF97_RS20265	COG3145	DNA-N1-methyladenine dioxygenase activity
BJF97_RS20270	COG2169	Transcriptional regulator
BJF97_RS20270	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BJF97_RS20285	COG2198	Histidine kinase
BJF97_RS20285	COG0642	Histidine kinase
BJF97_RS20295	COG2205	protein histidine kinase activity
BJF97_RS20295	COG0784	Response regulator, receiver
BJF97_RS20320	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BJF97_RS20325	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
BJF97_RS20330	COG0583	DNA-binding transcription factor activity
BJF97_RS20335	COG0584	glycerophosphoryl diester phosphodiesterase
BJF97_RS20340	COG2271	Major facilitator Superfamily
BJF97_RS20345	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BJF97_RS20355	COG0247	lactate metabolic process
BJF97_RS20365	COG2271	Major facilitator Superfamily
BJF97_RS20375	COG1414	Transcriptional regulator
BJF97_RS20430	COG3647	Membrane
BJF97_RS20460	COG1169	isochorismate synthase
BJF97_RS20465	COG2153	protein acetylation
BJF97_RS20475	COG0582	viral genome integration into host DNA
BJF97_RS20495	COG3121	Chaperone
BJF97_RS20505	COG0582	viral genome integration into host DNA
BJF97_RS20515	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BJF97_RS20520	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BJF97_RS20525	COG0713	ATP synthesis coupled electron transport
BJF97_RS20530	COG0839	Belongs to the complex I subunit 6 family
BJF97_RS20575	COG0583	DNA-binding transcription factor activity
BJF97_RS20580	COG0436	Aminotransferase
BJF97_RS20590	COG0471	metal ion transport
BJF97_RS20590	COG0490	domain, Protein
BJF97_RS20595	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BJF97_RS20620	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BJF97_RS20625	COG3959	Transketolase, thiamine diphosphate binding domain
BJF97_RS20630	COG3037	sugar-specific permease SgaT UlaA
BJF97_RS20640	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS20645	COG1609	Transcriptional regulator
BJF97_RS20655	COG0622	Phosphoesterase
BJF97_RS20660	COG0625	glutathione transferase activity
BJF97_RS20665	COG0625	glutathione transferase activity
BJF97_RS20670	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BJF97_RS20675	COG1090	epimerase
BJF97_RS20695	COG4598	ABC transporter
BJF97_RS20700	COG4160	amino acid transport
BJF97_RS20720	COG0163	prenyltransferase activity
BJF97_RS20725	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BJF97_RS20730	COG1286	toxin biosynthetic process
BJF97_RS20735	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
BJF97_RS20740	COG0285	dihydrofolate synthase activity
BJF97_RS20750	COG0586	Pfam SNARE associated Golgi protein
BJF97_RS20760	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BJF97_RS20780	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BJF97_RS20795	COG3101	peptidyl-lysine hydroxylation
BJF97_RS20800	COG0730	response to heat
BJF97_RS20825	COG2062	phosphohistidine phosphatase, SixA
BJF97_RS20840	COG3691	Protein conserved in bacteria
BJF97_RS20855	COG2116	formate transmembrane transporter activity
BJF97_RS20880	COG0583	DNA-binding transcription factor activity
BJF97_RS20885	COG2807	transmembrane transport
BJF97_RS20890	COG0436	Aminotransferase
BJF97_RS20895	COG3275	phosphorelay sensor kinase activity
BJF97_RS20900	COG3279	Response regulator of the LytR AlgR family
BJF97_RS20915	COG3961	Belongs to the TPP enzyme family
BJF97_RS20920	COG0667	Aldo Keto reductase
BJF97_RS20935	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BJF97_RS20940	COG2199	diguanylate cyclase activity
BJF97_RS20940	COG2200	EAL domain
BJF97_RS20955	COG3415	Transposase
BJF97_RS20960	COG3415	Transposase
BJF97_RS20990	COG0583	DNA-binding transcription factor activity
BJF97_RS20995	COG2211	Major facilitator Superfamily
BJF97_RS21000	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BJF97_RS21005	COG0583	DNA-binding transcription factor activity
BJF97_RS21010	COG0385	Bile acid
BJF97_RS21015	COG3530	Putative quorum-sensing-regulated virulence factor
BJF97_RS21035	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BJF97_RS21080	COG4319	ketosteroid isomerase
BJF97_RS21090	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
BJF97_RS21095	COG4208	sulfate ABC transporter
BJF97_RS21100	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
BJF97_RS21105	COG4150	thiosulfate binding
BJF97_RS21110	COG2837	iron assimilation
BJF97_RS21130	COG0860	N-Acetylmuramoyl-L-alanine amidase
BJF97_RS21140	COG2207	Transcriptional regulator
BJF97_RS21220	COG4810	utilization protein
BJF97_RS21230	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BJF97_RS21235	COG5342	invasion associated locus B
BJF97_RS21245	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BJF97_RS21245	COG0493	'glutamate synthase
BJF97_RS21250	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BJF97_RS21255	COG1393	Belongs to the ArsC family
BJF97_RS21270	COG0400	carboxylic ester hydrolase activity
BJF97_RS21280	COG2321	neutral zinc metallopeptidase
BJF97_RS21290	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
BJF97_RS21300	COG2716	regulation of RNA biosynthetic process
BJF97_RS21305	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BJF97_RS21310	COG0628	permease
BJF97_RS21315	COG4783	chaperone-mediated protein folding
BJF97_RS21320	COG1393	Belongs to the ArsC family
BJF97_RS21330	COG2233	PERMEase
BJF97_RS21335	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BJF97_RS21340	COG2723	6-phospho-beta-galactosidase activity
BJF97_RS21355	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BJF97_RS21365	COG2211	Major facilitator Superfamily
BJF97_RS21385	COG0248	Ppx GppA phosphatase
BJF97_RS21390	COG2200	EAL domain
BJF97_RS21400	COG0583	DNA-binding transcription factor activity
BJF97_RS21410	COG0519	Catalyzes the synthesis of GMP from XMP
BJF97_RS21410	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BJF97_RS21415	COG0516	GMP reductase activity
BJF97_RS21415	COG0517	IMP dehydrogenase activity
BJF97_RS21420	COG1570	exodeoxyribonuclease VII activity
BJF97_RS21435	COG1645	bacterial-type flagellum-dependent swarming motility
BJF97_RS21440	COG0438	transferase activity, transferring glycosyl groups
BJF97_RS21460	COG2976	Protein conserved in bacteria
BJF97_RS21490	COG4953	penicillin-binding protein 1C
BJF97_RS21495	COG2373	Large extracellular alpha-helical protein
BJF97_RS21505	COG1473	amidohydrolase
BJF97_RS21510	COG2897	thiosulfate sulfurtransferase activity
BJF97_RS21525	COG2975	iron-sulfur cluster assembly
BJF97_RS21530	COG0633	Ferredoxin
BJF97_RS21550	COG0822	iron-sulfur transferase activity
BJF97_RS21575	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
BJF97_RS21580	COG3683	transport system, periplasmic component
BJF97_RS21585	COG3711	transcriptional antiterminator
BJF97_RS21590	COG2814	Major facilitator Superfamily
BJF97_RS21595	COG2017	converts alpha-aldose to the beta-anomer
BJF97_RS21600	COG0477	Major facilitator Superfamily
BJF97_RS21600	COG2814	Major facilitator Superfamily
BJF97_RS21605	COG0457	Tetratricopeptide repeat
BJF97_RS21610	COG1940	carbohydrate kinase activity
BJF97_RS21615	COG2259	Doxx family
BJF97_RS21625	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BJF97_RS21625	COG1017	nitric oxide dioxygenase activity
BJF97_RS21630	COG0347	Belongs to the P(II) protein family
BJF97_RS21635	COG2204	response regulator
BJF97_RS21640	COG3170	Tfp pilus assembly protein FimV
BJF97_RS21645	COG2205	protein histidine kinase activity
BJF97_RS21650	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BJF97_RS21650	COG0047	phosphoribosylformylglycinamidine synthase activity
BJF97_RS21665	COG0560	Phosphoserine phosphatase
BJF97_RS21670	COG1737	Transcriptional regulator
BJF97_RS21675	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BJF97_RS21685	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
BJF97_RS21705	COG0681	Belongs to the peptidase S26 family
BJF97_RS21715	COG3086	response to oxidative stress
BJF97_RS21725	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
BJF97_RS21735	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BJF97_RS21745	COG0513	Belongs to the DEAD box helicase family
BJF97_RS21765	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BJF97_RS21770	COG3118	belongs to the thioredoxin family
BJF97_RS21775	COG3148	PFAM DTW domain containing protein
BJF97_RS21785	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BJF97_RS21790	COG5544	Lipoprotein
BJF97_RS21795	COG0477	Major facilitator Superfamily
BJF97_RS21830	COG0542	response to heat
BJF97_RS21845	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BJF97_RS21850	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BJF97_RS21855	COG1605	Chorismate mutase
BJF97_RS21855	COG0077	Prephenate dehydratase
BJF97_RS21865	COG1605	Chorismate mutase
BJF97_RS21865	COG0287	Prephenate dehydrogenase
BJF97_RS21870	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BJF97_RS21880	COG2199	diguanylate cyclase activity
BJF97_RS21885	COG2885	chlorophyll binding
BJF97_RS21920	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BJF97_RS21925	COG4137	Cytochrome C assembly protein
BJF97_RS21930	COG4536	flavin adenine dinucleotide binding
BJF97_RS21945	COG0497	DNA recombination
BJF97_RS21960	COG2867	negative regulation of translational initiation
BJF97_RS21980	COG2801	Transposase and inactivated derivatives
BJF97_RS22010	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BJF97_RS22115	COG4695	Portal protein
BJF97_RS22120	COG1802	Transcriptional regulator
BJF97_RS22120	COG4626	Terminase
BJF97_RS22165	COG3179	chitinase
BJF97_RS22230	COG4725	Belongs to the MT-A70-like family
BJF97_RS22260	COG4197	protein conserved in bacteria, prophage-related
BJF97_RS22265	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BJF97_RS22280	COG5532	Uncharacterized conserved protein (DUF2303)
BJF97_RS22285	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
BJF97_RS22340	COG0582	viral genome integration into host DNA
BJF97_RS22365	COG3121	Chaperone
BJF97_RS22380	COG0784	Response regulator, receiver
BJF97_RS22380	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BJF97_RS22380	COG2198	Histidine kinase
BJF97_RS22380	COG2205	protein histidine kinase activity
BJF97_RS22385	COG2197	response regulator
BJF97_RS22420	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BJF97_RS22425	COG1126	abc transporter atp-binding protein
BJF97_RS22430	COG0235	Class ii aldolase
BJF97_RS22440	COG4235	cytochrome complex assembly
BJF97_RS22440	COG3088	subunit of a heme lyase
BJF97_RS22445	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BJF97_RS22450	COG1138	Cytochrome C-type biogenesis protein
BJF97_RS22460	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BJF97_RS22465	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BJF97_RS22480	COG1858	cytochrome C peroxidase
BJF97_RS22485	COG2814	Major facilitator Superfamily
BJF97_RS22490	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS22515	COG3188	usher protein
BJF97_RS22540	COG3284	Transcriptional regulator
BJF97_RS22545	COG0671	phosphoesterase, PA-phosphatase related
BJF97_RS22550	COG0640	Transcriptional regulator
BJF97_RS22555	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BJF97_RS22585	COG4575	ribosome binding
BJF97_RS22595	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BJF97_RS22600	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BJF97_RS22610	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BJF97_RS22625	COG4176	ABC-type proline glycine betaine transport system permease component
BJF97_RS22635	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
BJF97_RS22645	COG1846	Transcriptional regulator
BJF97_RS22650	COG1566	PFAM secretion protein HlyD family protein
BJF97_RS22655	COG2814	Major facilitator Superfamily
BJF97_RS22660	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BJF97_RS22680	COG1238	metal cluster binding
BJF97_RS22685	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BJF97_RS22690	COG2823	Periplasmic or secreted lipoprotein
BJF97_RS22720	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
BJF97_RS22740	COG1546	Belongs to the CinA family
BJF97_RS22750	COG0803	Belongs to the bacterial solute-binding protein 9 family
BJF97_RS22755	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BJF97_RS22765	COG2951	lytic endotransglycosylase activity
BJF97_RS22770	COG3730	PTS system glucitol sorbitol-specific
BJF97_RS22775	COG3732	PTS system glucitol sorbitol-specific
BJF97_RS22785	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS22790	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS22795	COG1349	DNA-binding transcription factor activity
BJF97_RS22825	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
BJF97_RS22830	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
BJF97_RS22835	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BJF97_RS22840	COG1609	Transcriptional regulator
BJF97_RS22845	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BJF97_RS22845	COG1263	PTS System
BJF97_RS22850	COG2723	6-phospho-beta-galactosidase activity
BJF97_RS22855	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
BJF97_RS22865	COG3260	NADH ubiquinone oxidoreductase 20
BJF97_RS22870	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BJF97_RS22875	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
BJF97_RS22875	COG3261	NADH dehydrogenase
BJF97_RS22880	COG0650	Formate hydrogenlyase subunit 4
BJF97_RS22885	COG0651	ATP synthesis coupled electron transport
BJF97_RS22890	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BJF97_RS22905	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BJF97_RS22910	COG0298	carbon dioxide binding
BJF97_RS22915	COG0409	Hydrogenase expression formation protein
BJF97_RS22920	COG0309	Hydrogenase expression formation protein (HypE)
BJF97_RS22930	COG2755	lipolytic protein G-D-S-L family
BJF97_RS22930	COG0657	acetylesterase activity
BJF97_RS22935	COG2723	6-phospho-beta-galactosidase activity
BJF97_RS22950	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BJF97_RS22955	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BJF97_RS22960	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BJF97_RS22965	COG1447	Phosphotransferase system cellobiose-specific component IIA
BJF97_RS22970	COG1940	carbohydrate kinase activity
BJF97_RS22975	COG1609	Transcriptional regulator
BJF97_RS22985	COG1121	(ABC) transporter
BJF97_RS22990	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BJF97_RS22995	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BJF97_RS23015	COG3720	iron ion transport
BJF97_RS23020	COG4558	Periplasmic binding protein
BJF97_RS23025	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BJF97_RS23030	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
BJF97_RS23040	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS23045	COG2271	Major facilitator Superfamily
BJF97_RS23050	COG1063	alcohol dehydrogenase
BJF97_RS23060	COG1454	alcohol dehydrogenase
BJF97_RS23100	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BJF97_RS23105	COG1538	Outer membrane efflux protein
BJF97_RS23115	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BJF97_RS23120	COG1132	(ABC) transporter
BJF97_RS23150	COG3539	Fimbrial protein
BJF97_RS23160	COG3121	Chaperone
BJF97_RS23165	COG3188	usher protein
BJF97_RS23175	COG3539	Fimbrial protein
BJF97_RS23220	COG0582	viral genome integration into host DNA
BJF97_RS23240	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BJF97_RS23260	COG0477	Major facilitator Superfamily
BJF97_RS23270	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BJF97_RS23275	COG1388	LysM domain
BJF97_RS23275	COG4942	peptidase
BJF97_RS23335	COG2234	aminopeptidase activity
BJF97_RS23350	COG0697	spore germination
BJF97_RS23355	COG1104	cysteine desulfurase activity
BJF97_RS23385	COG0720	synthase
BJF97_RS23390	COG0602	queuosine metabolic process
BJF97_RS23410	COG3956	TIGRFAM MazG family protein
BJF97_RS23415	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BJF97_RS23425	COG2205	protein histidine kinase activity
BJF97_RS23425	COG4999	Histidine kinase
BJF97_RS23425	COG3437	response regulator, receiver
BJF97_RS23425	COG3850	Histidine kinase
BJF97_RS23430	COG1929	Belongs to the glycerate kinase type-1 family
BJF97_RS23435	COG4948	Mandelate Racemase Muconate Lactonizing
BJF97_RS23440	COG4948	Mandelate Racemase Muconate Lactonizing
BJF97_RS23445	COG2271	Major facilitator Superfamily
BJF97_RS23450	COG0716	FMN binding
BJF97_RS23455	COG0564	pseudouridine synthase activity
BJF97_RS23460	COG3098	single-species biofilm formation
BJF97_RS23480	COG1611	Belongs to the LOG family
BJF97_RS23485	COG0814	amino acid
BJF97_RS23490	COG1760	l-serine dehydratase
BJF97_RS23495	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BJF97_RS23510	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJF97_RS23525	COG0235	Class ii aldolase
BJF97_RS23530	COG0738	Major facilitator superfamily
BJF97_RS23550	COG1349	DNA-binding transcription factor activity
BJF97_RS23560	COG2363	Small membrane protein
BJF97_RS23565	COG0583	DNA-binding transcription factor activity
BJF97_RS23575	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BJF97_RS23580	COG2166	iron-sulfur cluster assembly
BJF97_RS23585	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BJF97_RS23590	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
BJF97_RS23755	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
BJF97_RS23770	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
BJF97_RS23785	COG1454	alcohol dehydrogenase
BJF97_RS23785	COG1012	belongs to the aldehyde dehydrogenase family
BJF97_RS23790	COG4656	Part of a membrane complex involved in electron transport
BJF97_RS23820	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BJF97_RS23825	COG0860	N-Acetylmuramoyl-L-alanine amidase
BJF97_RS23830	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BJF97_RS23830	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BJF97_RS23835	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BJF97_RS23840	COG1074	ATP-dependent DNA helicase activity
BJF97_RS23845	COG1025	Belongs to the peptidase M16 family
BJF97_RS23850	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
BJF97_RS23855	COG4967	type IV pilus modification protein PilV
BJF97_RS23865	COG4795	General secretion pathway protein
BJF97_RS23870	COG2165	general secretion pathway protein
BJF97_RS23905	COG0861	Integral membrane protein TerC family
BJF97_RS23915	COG0667	Aldo Keto reductase
BJF97_RS23930	COG1609	Transcriptional regulator
BJF97_RS23940	COG2186	Transcriptional regulator
BJF97_RS23945	COG2723	6-phospho-beta-galactosidase activity
BJF97_RS23950	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BJF97_RS23955	COG1609	Transcriptional regulator
BJF97_RS23965	COG0583	DNA-binding transcription factor activity
BJF97_RS23970	COG3539	Fimbrial protein
BJF97_RS23980	COG3121	Chaperone
BJF97_RS23985	COG3188	usher protein
BJF97_RS23995	COG1794	racemase activity, acting on amino acids and derivatives
BJF97_RS24005	COG1175	transmembrane transport
BJF97_RS24010	COG0395	ABC-type sugar transport system, permease component
BJF97_RS24015	COG3842	ATPase activity
BJF97_RS24025	COG0823	Involved in the tonB-independent uptake of proteins
BJF97_RS24050	COG2814	Major facilitator Superfamily
BJF97_RS24055	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS24060	COG0823	Involved in the tonB-independent uptake of proteins
BJF97_RS24070	COG0183	Belongs to the thiolase family
BJF97_RS24085	COG0814	amino acid
BJF97_RS24090	COG0667	Aldo Keto reductase
BJF97_RS24135	COG0640	Transcriptional regulator
BJF97_RS24155	COG0697	spore germination
BJF97_RS24160	COG1846	Transcriptional regulator
BJF97_RS24165	COG1522	sequence-specific DNA binding
BJF97_RS24175	COG2388	GCN5-related N-acetyl-transferase
BJF97_RS24180	COG3592	Divergent 4Fe-4S mono-cluster
BJF97_RS24195	COG1289	transmembrane transporter activity
BJF97_RS24200	COG1538	Outer membrane efflux protein
BJF97_RS24205	COG2909	trisaccharide binding
BJF97_RS24245	COG1349	DNA-binding transcription factor activity
BJF97_RS24250	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BJF97_RS24255	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BJF97_RS24260	COG0738	Major facilitator superfamily
BJF97_RS24305	COG1929	Belongs to the glycerate kinase type-1 family
BJF97_RS24310	COG3835	regulator
BJF97_RS24315	COG2223	nitrite transmembrane transporter activity
BJF97_RS24330	COG1393	Belongs to the ArsC family
BJF97_RS24335	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BJF97_RS24345	COG2814	Major facilitator Superfamily
BJF97_RS24350	COG0778	Nitroreductase
BJF97_RS24360	COG0667	Aldo Keto reductase
BJF97_RS24370	COG5002	protein histidine kinase activity
BJF97_RS24400	COG0656	L-ascorbic acid biosynthetic process
BJF97_RS24405	COG0667	Aldo Keto reductase
BJF97_RS24415	COG0702	epimerase
BJF97_RS24435	COG0582	viral genome integration into host DNA
BJF97_RS24485	COG1662	PFAM IS1 transposase
BJF97_RS24525	COG4942	peptidase
BJF97_RS24530	COG0583	DNA-binding transcription factor activity
BJF97_RS24535	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BJF97_RS24545	COG1811	Na channel or pump
BJF97_RS24565	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BJF97_RS24580	COG0716	FMN binding
BJF97_RS24590	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
BJF97_RS24610	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BJF97_RS24610	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS24615	COG3715	PTS system
BJF97_RS24620	COG3716	PTS system mannose fructose sorbose family IID component
BJF97_RS24635	COG1272	protein, Hemolysin III
BJF97_RS24645	COG1737	Transcriptional regulator
BJF97_RS24650	COG2723	6-phospho-beta-galactosidase activity
BJF97_RS24655	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BJF97_RS24660	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS24680	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BJF97_RS24685	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BJF97_RS24690	COG0006	proline dipeptidase activity
BJF97_RS24710	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BJF97_RS24715	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BJF97_RS24730	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BJF97_RS24730	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
BJF97_RS24735	COG1703	isobutyryl-CoA mutase activity
BJF97_RS24740	COG1024	Enoyl-CoA hydratase
BJF97_RS24745	COG0427	acetyl-CoA hydrolase
BJF97_RS24750	COG0583	DNA-binding transcription factor activity
BJF97_RS24755	COG2968	Membrane
BJF97_RS24765	COG0668	transmembrane transport
BJF97_RS24770	COG0191	fructose-bisphosphate aldolase activity
BJF97_RS24805	COG1122	ATPase activity
BJF97_RS24810	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BJF97_RS24815	COG0501	Belongs to the peptidase M48B family
BJF97_RS24835	COG2814	Major facilitator Superfamily
BJF97_RS24845	COG2356	endonuclease I
BJF97_RS24850	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BJF97_RS24855	COG0189	ligase activity
BJF97_RS24870	COG2197	response regulator
BJF97_RS24875	COG2805	Type II/IV secretion system protein
BJF97_RS24880	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BJF97_RS24885	COG0762	integral membrane protein
BJF97_RS24900	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BJF97_RS24905	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BJF97_RS24910	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BJF97_RS24925	COG3171	Protein conserved in bacteria
BJF97_RS24935	COG1194	a g-specific adenine glycosylase
BJF97_RS24950	COG2211	Major facilitator Superfamily
BJF97_RS24955	COG1982	Orn Lys Arg decarboxylase major
BJF97_RS24965	COG1982	Orn Lys Arg decarboxylase major
BJF97_RS24970	COG1811	Na channel or pump
BJF97_RS24980	COG3423	Transcriptional regulator
BJF97_RS25015	COG0471	metal ion transport
BJF97_RS25025	COG0626	cystathionine gamma-synthase activity
BJF97_RS25045	COG2365	Tyrosine phosphatase family
BJF97_RS25055	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BJF97_RS25060	COG0754	glutathionylspermidine amidase activity
BJF97_RS25070	COG0625	glutathione transferase activity
BJF97_RS25090	COG2211	Major facilitator Superfamily
BJF97_RS25095	COG0848	biopolymer transport protein
BJF97_RS25110	COG0586	Pfam SNARE associated Golgi protein
BJF97_RS25115	COG2207	Transcriptional regulator
BJF97_RS25120	COG1979	alcohol dehydrogenase
BJF97_RS25135	COG1032	radical SAM domain protein
BJF97_RS25140	COG2132	Multicopper oxidase
BJF97_RS25145	COG0204	Acyl-transferase
BJF97_RS25155	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
BJF97_RS25160	COG3111	PFAM Bacterial OB fold (BOF) protein
BJF97_RS25165	COG0745	RESPONSE REGULATOR receiver
BJF97_RS25170	COG0642	Histidine kinase
BJF97_RS25175	COG2249	NAD(P)H dehydrogenase (quinone) activity
BJF97_RS25180	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
BJF97_RS25190	COG3150	esterase
BJF97_RS25195	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BJF97_RS25200	COG3151	Protein conserved in bacteria
BJF97_RS25205	COG0494	nUDIX hydrolase
BJF97_RS25220	COG0754	glutathionylspermidine amidase activity
BJF97_RS25225	COG3384	dioxygenase
BJF97_RS25240	COG2960	long-chain fatty acid transporting porin activity
BJF97_RS25260	COG3025	triphosphatase activity
BJF97_RS25265	COG4991	sh3 domain protein
BJF97_RS25280	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BJF97_RS25335	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BJF97_RS25340	COG0358	DNA primase activity
BJF97_RS25385	COG2376	Dihydroxyacetone kinase
BJF97_RS25390	COG1461	Dihydroxyacetone kinase
BJF97_RS25405	COG2375	cellular response to nickel ion
BJF97_RS25410	COG1695	Transcriptional regulator
BJF97_RS25420	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BJF97_RS25425	COG1609	Transcriptional regulator
BJF97_RS25430	COG3250	beta-galactosidase activity
BJF97_RS25435	COG2731	YhcH YjgK YiaL family protein
BJF97_RS25440	COG0531	amino acid
BJF97_RS25445	COG0531	amino acid
BJF97_RS25455	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
BJF97_RS25455	COG3408	Glycogen debranching enzyme
BJF97_RS25500	COG1902	pentaerythritol trinitrate reductase activity
BJF97_RS25500	COG0446	pyridine nucleotide-disulphide oxidoreductase
BJF97_RS25510	COG2211	Major facilitator Superfamily
BJF97_RS25520	COG3507	Belongs to the glycosyl hydrolase 43 family
BJF97_RS25525	COG1451	nucleotide metabolic process
BJF97_RS25530	COG0673	inositol 2-dehydrogenase activity
BJF97_RS25550	COG2721	sulfolactate sulfo-lyase activity
BJF97_RS25560	COG2271	Major facilitator Superfamily
BJF97_RS25565	COG2186	Transcriptional regulator
BJF97_RS25570	COG0586	Pfam SNARE associated Golgi protein
BJF97_RS25580	COG1422	Protein of unknown function (DUF1090)
BJF97_RS25585	COG4575	ribosome binding
BJF97_RS25590	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
BJF97_RS25600	COG2259	Doxx family
BJF97_RS25605	COG0435	Glutathione S-transferase
BJF97_RS25610	COG3152	Membrane
BJF97_RS25615	COG0583	DNA-binding transcription factor activity
BJF97_RS25620	COG1741	Belongs to the pirin family
BJF97_RS25635	COG1929	Belongs to the glycerate kinase type-1 family
BJF97_RS25640	COG2084	Dehydrogenase
BJF97_RS25650	COG2271	Major facilitator Superfamily
BJF97_RS25655	COG2721	sulfolactate sulfo-lyase activity
BJF97_RS25660	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BJF97_RS25665	COG1349	DNA-binding transcription factor activity
BJF97_RS25680	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BJF97_RS25680	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BJF97_RS25680	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS25685	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS25685	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS25690	COG4573	that is required for full activity and stability of the Y subunit. Could have a chaperone-like function for the proper and stable folding of
BJF97_RS25695	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS25700	COG3414	Phosphotransferase system galactitol-specific IIB component
BJF97_RS25705	COG3775	system Galactitol-specific IIC component
BJF97_RS25710	COG1063	alcohol dehydrogenase
BJF97_RS25725	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BJF97_RS25745	COG2823	Periplasmic or secreted lipoprotein
BJF97_RS25750	COG0701	Predicted permease
BJF97_RS25755	COG0702	epimerase
BJF97_RS25760	COG0693	protein deglycase activity
BJF97_RS25770	COG2827	Endonuclease containing a URI domain
BJF97_RS25775	COG3153	acetyltransferase
BJF97_RS25780	COG3154	lipid carrier protein
BJF97_RS25785	COG0826	peptidase U32
BJF97_RS25790	COG0826	peptidase U32
BJF97_RS25795	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BJF97_RS25800	COG0814	amino acid
BJF97_RS25805	COG0513	Belongs to the DEAD box helicase family
BJF97_RS25835	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BJF97_RS25840	COG0195	Participates in both transcription termination and antitermination
BJF97_RS25865	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BJF97_RS25875	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BJF97_RS25880	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BJF97_RS25890	COG1534	Rna-binding protein
BJF97_RS25900	COG2027	D-alanyl-D-alanine carboxypeptidase
BJF97_RS25910	COG0697	spore germination
BJF97_RS25925	COG0142	geranyltranstransferase activity
BJF97_RS25930	COG3423	Transcriptional regulator
BJF97_RS25940	COG5007	Belongs to the BolA IbaG family
BJF97_RS25945	COG3113	response to antibiotic
BJF97_RS25950	COG2854	intermembrane phospholipid transfer
BJF97_RS25955	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BJF97_RS25960	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BJF97_RS25965	COG1127	ABC transporter
BJF97_RS25970	COG0530	calcium, potassium:sodium antiporter activity
BJF97_RS25980	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
BJF97_RS25985	COG3117	lipopolysaccharide transmembrane transporter activity
BJF97_RS25990	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
BJF97_RS25995	COG1137	ATPase activity
BJF97_RS26000	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BJF97_RS26005	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BJF97_RS26010	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS26015	COG1660	Displays ATPase and GTPase activities
BJF97_RS26020	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS26025	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BJF97_RS26030	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
BJF97_RS26035	COG0784	Response regulator, receiver
BJF97_RS26035	COG5002	protein histidine kinase activity
BJF97_RS26035	COG2198	Histidine kinase
BJF97_RS26040	COG1242	4 iron, 4 sulfur cluster binding
BJF97_RS26045	COG0069	glutamate synthase activity
BJF97_RS26045	COG0067	glutamate synthase
BJF97_RS26045	COG0070	glutamate synthase
BJF97_RS26050	COG0493	'glutamate synthase
BJF97_RS26055	COG2731	YhcH YjgK YiaL family protein
BJF97_RS26085	COG2969	positive regulation of protein catabolic process
BJF97_RS26090	COG0625	glutathione transferase activity
BJF97_RS26105	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BJF97_RS26110	COG3105	Protein conserved in bacteria
BJF97_RS26115	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BJF97_RS26120	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BJF97_RS26145	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
BJF97_RS26150	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
BJF97_RS26155	COG0471	metal ion transport
BJF97_RS26165	COG1802	Transcriptional regulator
BJF97_RS26190	COG2732	(Barnase) inhibitor
BJF97_RS26195	COG1289	transmembrane transporter activity
BJF97_RS26210	COG0583	DNA-binding transcription factor activity
BJF97_RS26215	COG1349	DNA-binding transcription factor activity
BJF97_RS26220	COG0312	modulator of DNA gyrase
BJF97_RS26225	COG3164	Protein of unknown function
BJF97_RS26240	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
BJF97_RS26245	COG1792	Involved in formation and maintenance of cell shape
BJF97_RS26250	COG1077	Cell shape determining protein MreB Mrl
BJF97_RS26255	COG2199	diguanylate cyclase activity
BJF97_RS26255	COG2200	EAL domain
BJF97_RS26260	COG0604	alcohol dehydrogenase
BJF97_RS26280	COG0511	ligase activity, forming carbon-carbon bonds
BJF97_RS26285	COG0439	Biotin carboxylase
BJF97_RS26290	COG3924	membrane
BJF97_RS26295	COG4145	pantothenate transmembrane transporter activity
BJF97_RS26320	COG1309	transcriptional regulator
BJF97_RS26325	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BJF97_RS26330	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BJF97_RS26370	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BJF97_RS26395	COG0758	DNA mediated transformation
BJF97_RS26425	COG0789	Transcriptional regulator
BJF97_RS26435	COG0203	ribosomal protein L17
BJF97_RS26440	COG0202	RNA polymerase activity
BJF97_RS26450	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BJF97_RS26465	COG0201	protein transport
BJF97_RS26480	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BJF97_RS26530	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BJF97_RS26545	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BJF97_RS26560	COG0088	Forms part of the polypeptide exit tunnel
BJF97_RS26570	COG0051	transcription antitermination factor activity, RNA binding
BJF97_RS26625	COG2964	Protein conserved in bacteria
BJF97_RS26630	COG0545	Peptidyl-prolyl cis-trans isomerase
BJF97_RS26640	COG1047	Peptidyl-prolyl cis-trans
BJF97_RS26645	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
BJF97_RS26660	COG0488	(ABC) transporter
BJF97_RS26670	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BJF97_RS26680	COG0429	hydrolase of the alpha beta-hydrolase fold
BJF97_RS26690	COG3954	Phosphoribulokinase
BJF97_RS26695	COG1765	OsmC-like protein
BJF97_RS26705	COG1289	transmembrane transporter activity
BJF97_RS26710	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BJF97_RS26735	COG0738	Major facilitator superfamily
BJF97_RS26740	COG0402	S-adenosylhomocysteine deaminase activity
BJF97_RS26745	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BJF97_RS26750	COG2146	nitrite reductase [NAD(P)H] activity
BJF97_RS26775	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BJF97_RS26780	COG0338	D12 class N6 adenine-specific DNA methyltransferase
BJF97_RS26785	COG3266	domain, Protein
BJF97_RS26800	COG4796	Type ii and iii secretion system protein
BJF97_RS26820	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BJF97_RS26825	COG0494	nUDIX hydrolase
BJF97_RS26835	COG1011	Hydrolase
BJF97_RS26840	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BJF97_RS26860	COG1640	4-alpha-glucanotransferase
BJF97_RS26865	COG0058	SHG alpha-glucan phosphorylase activity
BJF97_RS26880	COG1349	DNA-binding transcription factor activity
BJF97_RS26895	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BJF97_RS26900	COG0058	SHG alpha-glucan phosphorylase activity
BJF97_RS26925	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BJF97_RS26930	COG2610	gluconate transmembrane transporter activity
BJF97_RS26935	COG3265	gluconokinase activity
BJF97_RS26940	COG1609	Transcriptional regulator
BJF97_RS26945	COG1741	Belongs to the pirin family
BJF97_RS26950	COG0673	inositol 2-dehydrogenase activity
BJF97_RS26960	COG1247	-acetyltransferase
BJF97_RS26965	COG0405	Gamma-glutamyltransferase
BJF97_RS26975	COG0584	glycerophosphoryl diester phosphodiesterase
BJF97_RS27000	COG1414	Transcriptional regulator
BJF97_RS27005	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BJF97_RS27010	COG2271	Major facilitator Superfamily
BJF97_RS27015	COG2721	sulfolactate sulfo-lyase activity
BJF97_RS27040	COG0683	leucine binding
BJF97_RS27050	COG0683	leucine binding
BJF97_RS27065	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BJF97_RS27080	COG2177	Part of the ABC transporter FtsEX involved in
BJF97_RS27085	COG2884	Cell division ATP-binding protein ftsE
BJF97_RS27090	COG0552	protein localization to endoplasmic reticulum
BJF97_RS27095	COG0742	ribosomal rna small subunit methyltransferase
BJF97_RS27100	COG3776	membrane
BJF97_RS27110	COG3714	YhhN family
BJF97_RS27125	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BJF97_RS27135	COG0477	Major facilitator Superfamily
BJF97_RS27140	COG0628	permease
BJF97_RS27170	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BJF97_RS27190	COG1216	Glycosyl transferase, family 2
BJF97_RS27215	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BJF97_RS27225	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS27230	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BJF97_RS27235	COG2091	lysine biosynthetic process via aminoadipic acid
BJF97_RS27275	COG3479	Phenolic acid decarboxylase
BJF97_RS27290	COG0747	negative chemotaxis
BJF97_RS27295	COG0601	transmembrane transport
BJF97_RS27300	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BJF97_RS27305	COG0444	Belongs to the ABC transporter superfamily
BJF97_RS27325	COG2239	Acts as a magnesium transporter
BJF97_RS27330	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BJF97_RS27335	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BJF97_RS27340	COG0471	metal ion transport
BJF97_RS27345	COG3964	amidohydrolase
BJF97_RS27350	COG2204	response regulator
BJF97_RS27355	COG2081	HI0933 family
BJF97_RS27360	COG0306	phosphate transporter
BJF97_RS27370	COG0589	response to stress
BJF97_RS27390	COG2610	gluconate transmembrane transporter activity
BJF97_RS27425	COG1918	ferrous iron import across plasma membrane
BJF97_RS27430	COG2183	response to ionizing radiation
BJF97_RS27435	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BJF97_RS27450	COG0671	phosphoesterase, PA-phosphatase related
BJF97_RS27455	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
BJF97_RS27460	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BJF97_RS27465	COG0625	glutathione transferase activity
BJF97_RS27470	COG1454	alcohol dehydrogenase
BJF97_RS27490	COG2197	response regulator
BJF97_RS27495	COG1028	Short-chain dehydrogenase reductase Sdr
BJF97_RS27500	COG0583	DNA-binding transcription factor activity
BJF97_RS27505	COG1295	ribonuclease BN
BJF97_RS27510	COG0477	Major facilitator Superfamily
BJF97_RS27515	COG2982	Protein involved in outer membrane biogenesis
BJF97_RS27525	COG0612	Peptidase, M16
BJF97_RS27535	COG2199	diguanylate cyclase activity
BJF97_RS27535	COG2200	EAL domain
BJF97_RS27540	COG0457	Tetratricopeptide repeat
BJF97_RS27540	COG3118	belongs to the thioredoxin family
BJF97_RS27545	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
BJF97_RS27550	COG1215	transferase activity, transferring glycosyl groups
BJF97_RS27585	COG2194	sulfuric ester hydrolase activity
BJF97_RS27610	COG0457	Tetratricopeptide repeat
BJF97_RS27625	COG0489	protein tyrosine kinase activity
BJF97_RS27635	COG4608	Belongs to the ABC transporter superfamily
BJF97_RS27640	COG0444	Belongs to the ABC transporter superfamily
BJF97_RS27645	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BJF97_RS27650	COG0601	transmembrane transport
BJF97_RS27655	COG0747	negative chemotaxis
BJF97_RS27675	COG2223	nitrite transmembrane transporter activity
BJF97_RS27680	COG5571	outer membrane autotransporter
BJF97_RS27685	COG2818	Glycosylase
BJF97_RS27690	COG0456	acetyltransferase
BJF97_RS27695	COG0243	molybdopterin cofactor binding
BJF97_RS27700	COG2885	chlorophyll binding
BJF97_RS27705	COG1609	Transcriptional regulator
BJF97_RS27715	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BJF97_RS27735	COG2814	Major facilitator Superfamily
BJF97_RS27740	COG2944	sequence-specific DNA binding
BJF97_RS27745	COG1278	Cold shock
BJF97_RS27775	COG3274	enterobacterial common antigen metabolic process
BJF97_RS27780	COG4682	membrane
BJF97_RS27785	COG1070	Carbohydrate kinase
BJF97_RS27790	COG2115	Belongs to the xylose isomerase family
BJF97_RS27795	COG4213	ABC transporter substrate-binding protein
BJF97_RS27805	COG4214	carbohydrate transport
BJF97_RS27810	COG2207	Transcriptional regulator
BJF97_RS27810	COG1609	Transcriptional regulator
BJF97_RS27815	COG2992	FlgJ-related protein
BJF97_RS27820	COG0366	Alpha amylase catalytic
BJF97_RS27825	COG3977	Valine--pyruvate aminotransferase
BJF97_RS27830	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BJF97_RS27835	COG1414	Transcriptional regulator
BJF97_RS27845	COG2731	YhcH YjgK YiaL family protein
BJF97_RS27860	COG1070	Carbohydrate kinase
BJF97_RS27865	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
BJF97_RS27870	COG3623	hexulose-6-phosphate isomerase
BJF97_RS27875	COG0235	Class ii aldolase
BJF97_RS27880	COG1917	Cupin 2, conserved barrel domain protein
BJF97_RS27880	COG4977	sequence-specific DNA binding
BJF97_RS27885	COG2211	Major facilitator Superfamily
BJF97_RS27895	COG3276	selenocysteine insertion sequence binding
BJF97_RS27905	COG0625	glutathione transferase activity
BJF97_RS27910	COG1566	PFAM secretion protein HlyD family protein
BJF97_RS27930	COG3722	fumarate hydratase activity
BJF97_RS27945	COG3547	Transposase (IS116 IS110 IS902 family)
BJF97_RS27955	COG2186	Transcriptional regulator
BJF97_RS27965	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BJF97_RS27985	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BJF97_RS27990	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BJF97_RS28000	COG4942	peptidase
BJF97_RS28005	COG2861	carbohydrate metabolic process
BJF97_RS28010	COG0463	Glycosyl transferase, family 2
BJF97_RS28020	COG0156	8-amino-7-oxononanoate synthase activity
BJF97_RS28030	COG0859	PFAM glycosyl transferase family 9
BJF97_RS28035	COG0859	PFAM glycosyl transferase family 9
BJF97_RS28060	COG0859	PFAM glycosyl transferase family 9
BJF97_RS28070	COG0438	transferase activity, transferring glycosyl groups
BJF97_RS28075	COG1216	Glycosyl transferase, family 2
BJF97_RS28080	COG1519	Transferase
BJF97_RS28100	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BJF97_RS28105	COG0227	Belongs to the bacterial ribosomal protein bL28 family
BJF97_RS28115	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BJF97_RS28130	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BJF97_RS28140	COG1561	YicC-like family, N-terminal region
BJF97_RS28150	COG2860	membrane
BJF97_RS28170	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BJF97_RS28175	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BJF97_RS28180	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BJF97_RS28185	COG1494	fructose-1,6-bisphosphatase
BJF97_RS28195	COG3152	Membrane
BJF97_RS28225	COG3074	FtsZ-dependent cytokinesis
BJF97_RS28240	COG0786	glutamate:sodium symporter activity
BJF97_RS28245	COG2233	PERMEase
BJF97_RS28250	COG2982	Protein involved in outer membrane biogenesis
BJF97_RS28255	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BJF97_RS28255	COG1263	PTS System
BJF97_RS28260	COG1486	melibiose metabolic process
BJF97_RS28275	COG1940	carbohydrate kinase activity
BJF97_RS28280	COG0191	fructose-bisphosphate aldolase activity
BJF97_RS28290	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BJF97_RS28290	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BJF97_RS28295	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BJF97_RS28300	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BJF97_RS28300	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BJF97_RS28300	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BJF97_RS28310	COG1501	Belongs to the glycosyl hydrolase 31 family
BJF97_RS28315	COG2211	Major facilitator Superfamily
BJF97_RS28345	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BJF97_RS28365	COG1064	alcohol dehydrogenase
BJF97_RS28375	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BJF97_RS28390	COG1464	Belongs to the NlpA lipoprotein family
BJF97_RS28405	COG0583	DNA-binding transcription factor activity
BJF97_RS28415	COG1309	transcriptional regulator
BJF97_RS28425	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BJF97_RS28430	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BJF97_RS28440	COG2814	Major facilitator Superfamily
BJF97_RS28450	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BJF97_RS28450	COG1263	PTS System
BJF97_RS28465	COG0697	spore germination
BJF97_RS28475	COG5464	transposase or invertase
BJF97_RS28485	COG1609	Transcriptional regulator
BJF97_RS28495	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BJF97_RS28495	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BJF97_RS28500	COG1447	Phosphotransferase system cellobiose-specific component IIA
BJF97_RS28505	COG4580	involved in the transport of maltose and maltodextrins
BJF97_RS28530	COG2188	Transcriptional regulator
BJF97_RS28570	COG2271	Major facilitator Superfamily
BJF97_RS28580	COG2197	response regulator
BJF97_RS28585	COG0440	acetolactate synthase activity
BJF97_RS28590	COG0028	Belongs to the TPP enzyme family
BJF97_RS28610	COG2814	Major facilitator Superfamily
BJF97_RS28615	COG0583	DNA-binding transcription factor activity
BJF97_RS28620	COG2610	gluconate transmembrane transporter activity
BJF97_RS28630	COG0641	radical SAM
BJF97_RS28640	COG2149	membrane
BJF97_RS28655	COG2188	Transcriptional regulator
BJF97_RS28675	COG5645	(Lipo)protein
BJF97_RS28680	COG0823	Involved in the tonB-independent uptake of proteins
BJF97_RS28685	COG2271	Major facilitator Superfamily
BJF97_RS28695	COG0800	Aldolase
BJF97_RS28700	COG3734	2-keto-3-deoxy-galactonokinase
BJF97_RS28705	COG2186	Transcriptional regulator
BJF97_RS28710	COG0561	phosphatase activity
BJF97_RS28720	COG0583	DNA-binding transcription factor activity
BJF97_RS28725	COG0187	DNA topoisomerase II activity
BJF97_RS28735	COG0592	DNA-directed DNA polymerase activity
BJF97_RS28760	COG0456	acetyltransferase
BJF97_RS28775	COG2091	lysine biosynthetic process via aminoadipic acid
BJF97_RS28780	COG0431	NADPH-dependent FMN reductase
BJF97_RS28785	COG2252	PERMEase
BJF97_RS28790	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BJF97_RS28795	COG0363	glucosamine-6-phosphate deaminase activity
BJF97_RS28800	COG2382	esterase
BJF97_RS28810	COG0704	Plays a role in the regulation of phosphate uptake
BJF97_RS28815	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BJF97_RS28820	COG0581	inorganic phosphate transmembrane transporter activity
BJF97_RS28825	COG0573	inorganic phosphate transmembrane transporter activity
BJF97_RS28830	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BJF97_RS28835	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BJF97_RS28890	COG3312	ion transport
BJF97_RS28905	COG0716	FMN binding
BJF97_RS28910	COG1522	sequence-specific DNA binding
BJF97_RS29365	COG1129	ABC transporter
BJF97_RS29370	COG1879	ABC-type sugar transport system periplasmic component
BJF97_RS29440	COG1575	Belongs to the MenA family. Type 1 subfamily
BJF97_RS29465	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BJF97_RS29510	COG0460	homoserine dehydrogenase
BJF97_RS29510	COG0527	aspartate kinase activity
BJF97_RS29830	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BJF97_RS29995	COG2962	Rard protein
BJF97_RS30040	COG2267	carboxylic ester hydrolase activity
BJF97_RS30580	COG1175	transmembrane transport
BJF97_RS30825	COG2252	PERMEase
BJF97_RS31695	COG0456	acetyltransferase