locus-tag class description sake_RS00005 PF00308 Bacterial dnaA protein sake_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix sake_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain sake_RS00010 PF02767 DNA polymerase III beta subunit, central domain sake_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain sake_RS00015 PF02463 RecF/RecN/SMC N terminal domain sake_RS00020 PF05258 Dna[CI] antecedent, DciA sake_RS00025 PF02634 FdhD/NarQ family sake_RS00035 PF00204 DNA gyrase B sake_RS00035 PF00986 DNA gyrase B subunit, carboxyl terminus sake_RS00035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sake_RS00035 PF01751 Toprim domain sake_RS00040 PF00521 DNA gyrase/topoisomerase IV, subunit A sake_RS00040 PF03989 DNA gyrase C-terminal domain, beta-propeller sake_RS00045 PF12089 Transmembrane domain of unknown function (DUF3566) sake_RS00060 PF07690 Major Facilitator Superfamily sake_RS00070 PF01384 Phosphate transporter family sake_RS00090 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD sake_RS00095 PF01694 Rhomboid family sake_RS00100 PF00877 NlpC/P60 family sake_RS00100 PF08239 Bacterial SH3 domain sake_RS00100 PF01476 LysM domain sake_RS00115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family sake_RS00120 PF10509 Galactokinase galactose-binding signature sake_RS00120 PF00288 GHMP kinases N terminal domain sake_RS00120 PF08544 GHMP kinases C terminal sake_RS00125 PF00440 Bacterial regulatory proteins, tetR family sake_RS00130 PF01965 DJ-1/PfpI family sake_RS00135 PF04055 Radical SAM superfamily sake_RS00135 PF06968 Biotin and Thiamin Synthesis associated domain sake_RS00140 PF00999 Sodium/hydrogen exchanger family sake_RS00155 PF00196 Bacterial regulatory proteins, luxR family sake_RS00155 PF00072 Response regulator receiver domain sake_RS00160 PF07730 Histidine kinase sake_RS00160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sake_RS00165 PF02230 Phospholipase/Carboxylesterase sake_RS00175 PF03358 NADPH-dependent FMN reductase sake_RS00180 PF00296 Luciferase-like monooxygenase sake_RS00190 PF07690 Major Facilitator Superfamily sake_RS00195 PF00239 Resolvase, N terminal domain sake_RS00195 PF02796 Helix-turn-helix domain of resolvase sake_RS00200 PF07729 FCD domain sake_RS00200 PF00392 Bacterial regulatory proteins, gntR family sake_RS00205 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase sake_RS00205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase sake_RS00210 PF13378 Enolase C-terminal domain-like sake_RS00210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain sake_RS00215 PF00171 Aldehyde dehydrogenase family sake_RS00220 PF07690 Major Facilitator Superfamily sake_RS00225 PF02656 Domain of unknown function (DUF202) sake_RS00245 PF03575 Peptidase family S51 sake_RS00250 PF00266 Aminotransferase class-V sake_RS00270 PF00083 Sugar (and other) transporter sake_RS00270 PF07690 Major Facilitator Superfamily sake_RS00275 PF08669 Glycine cleavage T-protein C-terminal barrel domain sake_RS00275 PF17806 Sarcosine oxidase A3 domain sake_RS00275 PF01571 Aminomethyltransferase folate-binding domain sake_RS00275 PF07992 Pyridine nucleotide-disulphide oxidoreductase sake_RS00285 PF04303 PrpF protein sake_RS00295 PF13520 Amino acid permease sake_RS00300 PF07969 Amidohydrolase family sake_RS00330 PF00892 EamA-like transporter family sake_RS00340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle sake_RS00345 PF00528 Binding-protein-dependent transport system inner membrane component sake_RS00350 PF12911 N-terminal TM domain of oligopeptide transport permease C sake_RS00350 PF00528 Binding-protein-dependent transport system inner membrane component sake_RS00355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region sake_RS00355 PF00005 ABC transporter sake_RS00360 PF01053 Cys/Met metabolism PLP-dependent enzyme sake_RS00365 PF01053 Cys/Met metabolism PLP-dependent enzyme sake_RS00370 PF00296 Luciferase-like monooxygenase sake_RS00375 PF04960 Glutaminase sake_RS00410 PF00005 ABC transporter sake_RS00420 PF07690 Major Facilitator Superfamily sake_RS00430 PF13305 Tetracyclin repressor-like, C-terminal domain sake_RS00430 PF00440 Bacterial regulatory proteins, tetR family sake_RS00440 PF07729 FCD domain sake_RS00440 PF00392 Bacterial regulatory proteins, gntR family sake_RS00445 PF03806 AbgT putative transporter family sake_RS00450 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain sake_RS00450 PF02558 Ketopantoate reductase PanE/ApbA sake_RS00460 PF01925 Sulfite exporter TauE/SafE sake_RS00475 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading sake_RS00480 PF07729 FCD domain sake_RS00480 PF00392 Bacterial regulatory proteins, gntR family sake_RS00485 PF00082 Subtilase family sake_RS00485 PF04151 Bacterial pre-peptidase C-terminal domain sake_RS00490 PF00535 Glycosyl transferase family 2 sake_RS00495 PF00874 PRD domain sake_RS00495 PF03123 CAT RNA binding domain sake_RS00510 PF07702 UTRA domain sake_RS00510 PF00392 Bacterial regulatory proteins, gntR family sake_RS00515 PF17391 Urocanase N-terminal domain sake_RS00515 PF17392 Urocanase C-terminal domain sake_RS00515 PF01175 Urocanase Rossmann-like domain sake_RS00520 PF01979 Amidohydrolase family sake_RS00525 PF00491 Arginase family sake_RS00530 PF00221 Aromatic amino acid lyase sake_RS00545 PF04542 Sigma-70 region 2 sake_RS00545 PF08281 Sigma-70, region 4 sake_RS00550 PF03780 Asp23 family, cell envelope-related function sake_RS00575 PF04226 Transglycosylase associated protein sake_RS00590 PF00672 HAMP domain sake_RS00590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sake_RS00590 PF00512 His Kinase A (phospho-acceptor) domain sake_RS00595 PF00072 Response regulator receiver domain sake_RS00595 PF00486 Transcriptional regulatory protein, C terminal sake_RS00605 PF00440 Bacterial regulatory proteins, tetR family sake_RS00605 PF08360 QacR-like protein, C-terminal region sake_RS00610 PF07687 Peptidase dimerisation domain sake_RS00610 PF01546 Peptidase family M20/M25/M40 sake_RS00620 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain sake_RS00620 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain sake_RS00620 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain sake_RS00630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family sake_RS00630 PF03466 LysR substrate binding domain sake_RS00635 PF04205 FMN-binding domain sake_RS00635 PF00890 FAD binding domain sake_RS00640 PF04264 YceI-like domain sake_RS00655 PF06781 Cell division protein CrgA sake_RS00660 PF04203 Sortase domain sake_RS00670 PF00117 Glutamine amidotransferase class-I sake_RS00675 PF00069 Protein kinase domain sake_RS00675 PF03793 PASTA domain sake_RS00680 PF00069 Protein kinase domain sake_RS00685 PF00905 Penicillin binding protein transpeptidase domain sake_RS00690 PF01098 Cell cycle protein sake_RS00700 PF16697 Inner membrane component of T3SS, cytoplasmic domain sake_RS00720 PF00205 Thiamine pyrophosphate enzyme, central domain sake_RS00720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain sake_RS00720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain sake_RS00725 PF02028 BCCT, betaine/carnitine/choline family transporter sake_RS00735 PF02585 GlcNAc-PI de-N-acetylase sake_RS00750 PF00210 Ferritin-like domain sake_RS00755 PF00313 'Cold-shock' DNA-binding domain sake_RS00760 PF00106 short chain dehydrogenase sake_RS00770 PF00534 Glycosyl transferases group 1 sake_RS00770 PF13439 Glycosyltransferase Family 4 sake_RS00780 PF08239 Bacterial SH3 domain sake_RS00780 PF00005 ABC transporter sake_RS00785 PF02350 UDP-N-acetylglucosamine 2-epimerase sake_RS00805 PF00534 Glycosyl transferases group 1 sake_RS00805 PF13439 Glycosyltransferase Family 4 sake_RS00810 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain sake_RS00810 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain sake_RS00810 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain sake_RS00830 PF17760 UvrA interaction domain sake_RS00830 PF17755 UvrA DNA-binding domain sake_RS00830 PF00005 ABC transporter sake_RS00845 PF03239 Iron permease FTR1 family sake_RS00850 PF13473 Cupredoxin-like domain sake_RS00850 PF09375 Imelysin sake_RS00855 PF04261 Dyp-type peroxidase family sake_RS00855 PF10518 TAT (twin-arginine translocation) pathway signal sequence sake_RS00865 PF00296 Luciferase-like monooxygenase sake_RS00880 PF12704 MacB-like periplasmic core domain sake_RS00880 PF00005 ABC transporter sake_RS00880 PF02687 FtsX-like permease family sake_RS00890 PF07690 Major Facilitator Superfamily sake_RS00895 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region sake_RS00895 PF01872 RibD C-terminal domain sake_RS00900 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase sake_RS00900 PF00925 GTP cyclohydrolase II sake_RS00905 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase sake_RS00905 PF00925 GTP cyclohydrolase II sake_RS00910 PF00885 6,7-dimethyl-8-ribityllumazine synthase sake_RS00920 PF00384 Molybdopterin oxidoreductase sake_RS00925 PF08240 Alcohol dehydrogenase GroES-like domain sake_RS00925 PF00107 Zinc-binding dehydrogenase sake_RS00930 PF01174 SNO glutamine amidotransferase family sake_RS00935 PF01680 SOR/SNZ family sake_RS00940 PF00392 Bacterial regulatory proteins, gntR family sake_RS00955 PF00324 Amino acid permease sake_RS00960 PF04235 Protein of unknown function (DUF418) sake_RS00960 PF07786 Protein of unknown function (DUF1624) sake_RS00965 PF00403 Heavy-metal-associated domain sake_RS00975 PF02583 Metal-sensitive transcriptional repressor sake_RS00985 PF00005 ABC transporter sake_RS01015 PF10437 Bacterial lipoate protein ligase C-terminus sake_RS01015 PF03099 Biotin/lipoate A/B protein ligase family sake_RS01020 PF03466 LysR substrate binding domain sake_RS01020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family sake_RS01025 PF07690 Major Facilitator Superfamily sake_RS01035 PF13378 Enolase C-terminal domain-like sake_RS01035 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain sake_RS01040 PF13378 Enolase C-terminal domain-like sake_RS01045 PF00171 Aldehyde dehydrogenase family sake_RS01050 PF00701 Dihydrodipicolinate synthetase family sake_RS01055 PF03466 LysR substrate binding domain sake_RS01055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family sake_RS01060 PF02447 GntP family permease sake_RS01065 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain sake_RS01065 PF13378 Enolase C-terminal domain-like sake_RS01070 PF10509 Galactokinase galactose-binding signature sake_RS01070 PF08544 GHMP kinases C terminal sake_RS01070 PF00288 GHMP kinases N terminal domain sake_RS01080 PF08544 GHMP kinases C terminal sake_RS01080 PF00288 GHMP kinases N terminal domain sake_RS01085 PF01070 FMN-dependent dehydrogenase sake_RS01095 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal sake_RS01095 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal sake_RS01110 PF00067 Cytochrome P450 sake_RS01120 PF07992 Pyridine nucleotide-disulphide oxidoreductase sake_RS01120 PF14759 Reductase C-terminal sake_RS01125 PF00128 Alpha amylase, catalytic domain sake_RS01130 PF00528 Binding-protein-dependent transport system inner membrane component sake_RS01135 PF00528 Binding-protein-dependent transport system inner membrane component sake_RS01140 PF13416 Bacterial extracellular solute-binding protein sake_RS01150 PF17912 MalK OB fold domain sake_RS01150 PF00005 ABC transporter sake_RS01165 PF07690 Major Facilitator Superfamily sake_RS01170 PF00871 Acetokinase family sake_RS01175 PF00501 AMP-binding enzyme sake_RS01175 PF13193 AMP-binding enzyme C-terminal domain sake_RS01180 PF00210 Ferritin-like domain sake_RS01195 PF01515 Phosphate acetyl/butaryl transferase sake_RS01195 PF07085 DRTGG domain sake_RS01215 PF07690 Major Facilitator Superfamily sake_RS01220 PF00440 Bacterial regulatory proteins, tetR family sake_RS01220 PF16859 Tetracyclin repressor-like, C-terminal domain sake_RS01225 PF01979 Amidohydrolase family sake_RS01235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain sake_RS01235 PF08028 Acyl-CoA dehydrogenase, C-terminal domain sake_RS01250 PF01557 Fumarylacetoacetate (FAA) hydrolase family sake_RS01255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily sake_RS01260 PF01494 FAD binding domain sake_RS01270 PF13193 AMP-binding enzyme C-terminal domain sake_RS01270 PF00501 AMP-binding enzyme sake_RS01290 PF00440 Bacterial regulatory proteins, tetR family sake_RS01295 PF02810 SEC-C motif sake_RS01300 PF00860 Permease family sake_RS01305 PF00248 Aldo/keto reductase family sake_RS01320 PF01261 Xylose isomerase-like TIM barrel sake_RS01325 PF00294 pfkB family carbohydrate kinase sake_RS01335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain sake_RS01335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain sake_RS01335 PF00205 Thiamine pyrophosphate enzyme, central domain sake_RS01340 PF00171 Aldehyde dehydrogenase family sake_RS01345 PF01261 Xylose isomerase-like TIM barrel sake_RS01350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold sake_RS01350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain sake_RS01355 PF01261 Xylose isomerase-like TIM barrel sake_RS01360 PF00083 Sugar (and other) transporter sake_RS01365 PF00107 Zinc-binding dehydrogenase sake_RS01365 PF08240 Alcohol dehydrogenase GroES-like domain sake_RS01370 PF07690 Major Facilitator Superfamily sake_RS01375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family sake_RS01375 PF03466 LysR substrate binding domain sake_RS01380 PF00557 Metallopeptidase family M24 sake_RS01380 PF01321 Creatinase/Prolidase N-terminal domain sake_RS01385 PF00155 Aminotransferase class I and II sake_RS01390 PF01546 Peptidase family M20/M25/M40 sake_RS01390 PF07687 Peptidase dimerisation domain sake_RS01395 PF07690 Major Facilitator Superfamily sake_RS01405 PF00202 Aminotransferase class-III sake_RS01410 PF00171 Aldehyde dehydrogenase family sake_RS01415 PF05222 Alanine dehydrogenase/PNT, N-terminal domain sake_RS01415 PF01262 Alanine dehydrogenase/PNT, C-terminal domain sake_RS01425 PF03358 NADPH-dependent FMN reductase sake_RS01435 PF02894 Oxidoreductase family, C-terminal alpha/beta domain sake_RS01435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold sake_RS01440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain sake_RS01440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold sake_RS01450 PF00534 Glycosyl transferases group 1 sake_RS01450 PF08323 Starch synthase catalytic domain sake_RS01460 PF00248 Aldo/keto reductase family sake_RS01475 PF00534 Glycosyl transferases group 1 sake_RS01485 PF01451 Low molecular weight phosphotyrosine protein phosphatase sake_RS01490 PF02706 Chain length determinant protein sake_RS01490 PF13807 G-rich domain on putative tyrosine kinase sake_RS01490 PF13614 AAA domain sake_RS01520 PF00356 Bacterial regulatory proteins, lacI family sake_RS01525 PF00171 Aldehyde dehydrogenase family sake_RS01530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain sake_RS01530 PF00205 Thiamine pyrophosphate enzyme, central domain sake_RS01530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain sake_RS01535 PF03328 HpcH/HpaI aldolase/citrate lyase family sake_RS01540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain sake_RS01540 PF01842 ACT domain sake_RS01540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain sake_RS01545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain sake_RS01545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold sake_RS01555 PF01261 Xylose isomerase-like TIM barrel sake_RS01565 PF04954 Siderophore-interacting protein sake_RS01565 PF08021 Siderophore-interacting FAD-binding domain sake_RS01575 PF04962 KduI/IolB family sake_RS01585 PF00083 Sugar (and other) transporter sake_RS01595 PF01370 NAD dependent epimerase/dehydratase family sake_RS01595 PF08338 Domain of unknown function (DUF1731) sake_RS01600 PF00892 EamA-like transporter family sake_RS01605 PF01566 Natural resistance-associated macrophage protein sake_RS01610 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain sake_RS01610 PF00364 Biotin-requiring enzyme sake_RS01610 PF02785 Biotin carboxylase C-terminal domain sake_RS01610 PF00289 Biotin carboxylase, N-terminal domain sake_RS01615 PF02626 Carboxyltransferase domain, subdomain A and B sake_RS01625 PF02517 CPBP intramembrane metalloprotease sake_RS01630 PF02127 Aminopeptidase I zinc metalloprotease (M18) sake_RS01635 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain sake_RS01635 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain sake_RS01640 PF00294 pfkB family carbohydrate kinase sake_RS01645 PF01161 Phosphatidylethanolamine-binding protein sake_RS01655 PF03009 Glycerophosphoryl diester phosphodiesterase family sake_RS01660 PF00248 Aldo/keto reductase family sake_RS01665 PF00860 Permease family sake_RS01670 PF01047 MarR family sake_RS01675 PF07690 Major Facilitator Superfamily sake_RS01680 PF00854 POT family sake_RS01685 PF00270 DEAD/DEAH box helicase sake_RS01685 PF17191 RecG wedge domain sake_RS01685 PF13749 Putative ATP-dependent DNA helicase recG C-terminal sake_RS01690 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I sake_RS01690 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II sake_RS01690 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III sake_RS01690 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain sake_RS01695 PF00491 Arginase family sake_RS01705 PF00800 Prephenate dehydratase sake_RS01705 PF01842 ACT domain sake_RS01715 PF01513 ATP-NAD kinase sake_RS01725 PF02403 Seryl-tRNA synthetase N-terminal domain sake_RS01725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) sake_RS01735 PF00795 Carbon-nitrogen hydrolase sake_RS01760 PF13193 AMP-binding enzyme C-terminal domain sake_RS01760 PF16177 Acetyl-coenzyme A synthetase N-terminus sake_RS01760 PF00501 AMP-binding enzyme sake_RS01765 PF00528 Binding-protein-dependent transport system inner membrane component sake_RS01775 PF00005 ABC transporter sake_RS01780 PF02803 Thiolase, C-terminal domain sake_RS01780 PF00108 Thiolase, N-terminal domain sake_RS01785 PF00378 Enoyl-CoA hydratase/isomerase sake_RS01790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain sake_RS01790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain sake_RS01795 PF03061 Thioesterase superfamily sake_RS01800 PF01575 MaoC like domain sake_RS01800 PF00171 Aldehyde dehydrogenase family sake_RS01810 PF00083 Sugar (and other) transporter sake_RS01820 PF00356 Bacterial regulatory proteins, lacI family sake_RS01830 PF00083 Sugar (and other) transporter sake_RS01850 PF05138 Phenylacetic acid catabolic protein sake_RS01855 PF06243 Phenylacetic acid degradation B sake_RS01860 PF05138 Phenylacetic acid catabolic protein sake_RS01865 PF01883 Iron-sulfur cluster assembly protein sake_RS01870 PF00175 Oxidoreductase NAD-binding domain sake_RS01870 PF00970 Oxidoreductase FAD-binding domain sake_RS01870 PF00111 2Fe-2S iron-sulfur cluster binding domain sake_RS01875 PF00378 Enoyl-CoA hydratase/isomerase sake_RS01880 PF00296 Luciferase-like monooxygenase sake_RS01890 PF07690 Major Facilitator Superfamily sake_RS01895 PF01126 Heme oxygenase sake_RS01910 PF08543 Phosphomethylpyrimidine kinase sake_RS01920 PF00753 Metallo-beta-lactamase superfamily sake_RS01925 PF00324 Amino acid permease sake_RS01930 PF01183 Glycosyl hydrolases family 25 sake_RS01940 PF02378 Phosphotransferase system, EIIC sake_RS01940 PF00367 phosphotransferase system, EIIB sake_RS01940 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 sake_RS01955 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain sake_RS01955 PF02769 AIR synthase related protein, C-terminal domain sake_RS01955 PF00586 AIR synthase related protein, N-terminal domain sake_RS01970 PF01613 Flavin reductase like domain sake_RS01975 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin sake_RS01985 PF00392 Bacterial regulatory proteins, gntR family sake_RS01985 PF07729 FCD domain sake_RS02000 PF00561 alpha/beta hydrolase fold sake_RS02005 PF00171 Aldehyde dehydrogenase family sake_RS02010 PF01361 Tautomerase enzyme sake_RS02015 PF00296 Luciferase-like monooxygenase sake_RS02020 PF00723 Glycosyl hydrolases family 15 sake_RS02025 PF00107 Zinc-binding dehydrogenase sake_RS02025 PF08240 Alcohol dehydrogenase GroES-like domain sake_RS02030 PF04343 Protein of unknown function, DUF488 sake_RS02050 PF13840 ACT domain sake_RS02050 PF01842 ACT domain sake_RS02050 PF00696 Amino acid kinase family sake_RS02055 PF13662 Toprim domain sake_RS02055 PF02132 RecR protein sake_RS02060 PF12169 DNA polymerase III subunits gamma and tau domain III sake_RS02085 PF07690 Major Facilitator Superfamily sake_RS02100 PF05872 Bacterial protein of unknown function (DUF853) sake_RS02105 PF05173 Dihydrodipicolinate reductase, C-terminus sake_RS02105 PF01113 Dihydrodipicolinate reductase, N-terminus sake_RS02110 PF05525 Branched-chain amino acid transport protein sake_RS02115 PF00501 AMP-binding enzyme sake_RS02115 PF13193 AMP-binding enzyme C-terminal domain sake_RS02125 PF02502 Ribose/Galactose Isomerase sake_RS02135 PF13460 NAD(P)H-binding sake_RS02135 PF11066 Protein of unknown function (DUF2867) sake_RS02150 PF01593 Flavin containing amine oxidoreductase sake_RS02155 PF08544 GHMP kinases C terminal sake_RS02155 PF10509 Galactokinase galactose-binding signature sake_RS02155 PF00288 GHMP kinases N terminal domain sake_RS02160 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain sake_RS02160 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain sake_RS02165 PF08220 DeoR-like helix-turn-helix domain sake_RS02165 PF00455 DeoR C terminal sensor domain sake_RS02170 PF00474 Sodium:solute symporter family sake_RS02195 PF01593 Flavin containing amine oxidoreductase sake_RS02200 PF00348 Polyprenyl synthetase sake_RS02210 PF09335 SNARE associated Golgi protein sake_RS02215 PF00570 HRDC domain sake_RS02215 PF00271 Helicase conserved C-terminal domain sake_RS02215 PF00270 DEAD/DEAH box helicase sake_RS02215 PF16124 RecQ zinc-binding sake_RS02215 PF09382 RQC domain sake_RS02220 PF00270 DEAD/DEAH box helicase sake_RS02220 PF04408 Helicase associated domain (HA2) sake_RS02220 PF00271 Helicase conserved C-terminal domain sake_RS02220 PF08482 ATP-dependent helicase C-terminal sake_RS02250 PF00005 ABC transporter sake_RS02255 PF00950 ABC 3 transport family sake_RS02265 PF00440 Bacterial regulatory proteins, tetR family sake_RS02280 PF14437 MafB19-like deaminase sake_RS02290 PF00486 Transcriptional regulatory protein, C terminal sake_RS02300 PF00893 Small Multidrug Resistance protein sake_RS02305 PF00893 Small Multidrug Resistance protein sake_RS02330 PF04542 Sigma-70 region 2 sake_RS02330 PF04545 Sigma-70, region 4 sake_RS02345 PF00456 Transketolase, thiamine diphosphate binding domain sake_RS02350 PF00115 Cytochrome C and Quinol oxidase polypeptide I sake_RS02355 PF02308 MgtC family sake_RS02365 PF13823 Alcohol dehydrogenase GroES-associated sake_RS02365 PF08240 Alcohol dehydrogenase GroES-like domain sake_RS02365 PF00107 Zinc-binding dehydrogenase sake_RS02380 PF01593 Flavin containing amine oxidoreductase sake_RS02385 PF00083 Sugar (and other) transporter sake_RS02390 PF00356 Bacterial regulatory proteins, lacI family sake_RS02400 PF00596 Class II Aldolase and Adducin N-terminal domain sake_RS02405 PF02610 L-arabinose isomerase sake_RS02405 PF11762 L-arabinose isomerase C-terminal domain sake_RS02410 PF01494 FAD binding domain sake_RS02430 PF02554 Carbon starvation protein CstA sake_RS02430 PF13722 5TM C-terminal transporter carbon starvation CstA sake_RS02445 PF00528 Binding-protein-dependent transport system inner membrane component sake_RS02450 PF00497 Bacterial extracellular solute-binding proteins, family 3 sake_RS02455 PF01053 Cys/Met metabolism PLP-dependent enzyme sake_RS02465 PF01047 MarR family sake_RS02475 PF00196 Bacterial regulatory proteins, luxR family sake_RS02475 PF00072 Response regulator receiver domain sake_RS02480 PF07730 Histidine kinase sake_RS02490 PF09383 NIL domain sake_RS02490 PF00005 ABC transporter sake_RS02495 PF03328 HpcH/HpaI aldolase/citrate lyase family sake_RS02510 PF00708 Acylphosphatase sake_RS02515 PF01545 Cation efflux family sake_RS02530 PF00206 Lyase sake_RS02530 PF08328 Adenylosuccinate lyase C-terminal sake_RS02545 PF00155 Aminotransferase class I and II sake_RS02550 PF00676 Dehydrogenase E1 component sake_RS02555 PF02780 Transketolase, C-terminal domain sake_RS02555 PF02779 Transketolase, pyrimidine binding domain sake_RS02560 PF02817 e3 binding domain sake_RS02560 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) sake_RS02560 PF00364 Biotin-requiring enzyme sake_RS02570 PF14602 Hexapeptide repeat of succinyl-transferase sake_RS02570 PF12464 Maltose acetyltransferase sake_RS02580 PF13193 AMP-binding enzyme C-terminal domain sake_RS02580 PF00501 AMP-binding enzyme sake_RS02585 PF00528 Binding-protein-dependent transport system inner membrane component sake_RS02590 PF00005 ABC transporter sake_RS02590 PF09383 NIL domain sake_RS02595 PF03180 NLPA lipoprotein sake_RS02600 PF07690 Major Facilitator Superfamily sake_RS02610 PF08240 Alcohol dehydrogenase GroES-like domain sake_RS02610 PF00107 Zinc-binding dehydrogenase sake_RS02615 PF02733 Dak1 domain sake_RS02615 PF02734 DAK2 domain sake_RS02620 PF08125 Mannitol dehydrogenase C-terminal domain sake_RS02620 PF01232 Mannitol dehydrogenase Rossmann domain sake_RS02625 PF02782 FGGY family of carbohydrate kinases, C-terminal domain sake_RS02625 PF00370 FGGY family of carbohydrate kinases, N-terminal domain sake_RS02635 PF00370 FGGY family of carbohydrate kinases, N-terminal domain sake_RS02635 PF02782 FGGY family of carbohydrate kinases, C-terminal domain sake_RS02645 PF13419 Haloacid dehalogenase-like hydrolase sake_RS02655 PF01032 FecCD transport family sake_RS02660 PF01032 FecCD transport family sake_RS02665 PF00005 ABC transporter sake_RS02680 PF00830 Ribosomal L28 family sake_RS02685 PF00471 Ribosomal protein L33 sake_RS02690 PF00253 Ribosomal protein S14p/S29e sake_RS02695 PF00216 Bacterial DNA-binding protein sake_RS02705 PF04234 CopC domain sake_RS02710 PF04314 Copper chaperone PCu(A)C sake_RS02720 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) sake_RS02720 PF05425 Copper resistance protein D sake_RS02725 PF00578 AhpC/TSA family sake_RS02725 PF02683 Cytochrome C biogenesis protein transmembrane region sake_RS02725 PF17991 Thioredoxin like C-terminal domain sake_RS02740 PF05175 Methyltransferase small domain sake_RS02740 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus sake_RS02750 PF00692 dUTPase sake_RS02755 PF08402 TOBE domain sake_RS02755 PF00005 ABC transporter sake_RS02770 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter sake_RS02770 PF00361 Proton-conducting membrane transporter sake_RS02770 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus sake_RS02770 PF13244 Domain of unknown function (DUF4040) sake_RS02790 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) sake_RS02795 PF03334 Na+/H+ antiporter subunit sake_RS02805 PF09819 ABC-type cobalt transport system, permease component sake_RS02810 PF00005 ABC transporter sake_RS02820 PF00005 ABC transporter sake_RS02820 PF02687 FtsX-like permease family sake_RS02820 PF12704 MacB-like periplasmic core domain sake_RS02825 PF12704 MacB-like periplasmic core domain sake_RS02825 PF02687 FtsX-like permease family sake_RS02830 PF03069 Acetamidase/Formamidase family sake_RS02845 PF07690 Major Facilitator Superfamily sake_RS02855 PF01451 Low molecular weight phosphotyrosine protein phosphatase sake_RS02870 PF00012 Hsp70 protein sake_RS02875 PF01025 GrpE sake_RS02880 PF00226 DnaJ domain sake_RS02880 PF01556 DnaJ C terminal domain sake_RS02880 PF00684 DnaJ central domain sake_RS02885 PF13411 MerR HTH family regulatory protein sake_RS02890 PF02390 Putative methyltransferase sake_RS02895 PF01235 Sodium:alanine symporter family sake_RS02905 PF13419 Haloacid dehalogenase-like hydrolase sake_RS02915 PF10431 C-terminal, D2-small domain, of ClpB protein sake_RS02915 PF02861 Clp amino terminal domain, pathogenicity island component sake_RS02915 PF17871 AAA lid domain sake_RS02915 PF00004 ATPase family associated with various cellular activities (AAA) sake_RS02915 PF07724 AAA domain (Cdc48 subfamily) sake_RS02920 PF01070 FMN-dependent dehydrogenase sake_RS02925 PF02146 Sir2 family sake_RS02935 PF00586 AIR synthase related protein, N-terminal domain sake_RS02935 PF02769 AIR synthase related protein, C-terminal domain sake_RS02940 PF00156 Phosphoribosyl transferase domain sake_RS02960 PF07690 Major Facilitator Superfamily sake_RS02970 PF00528 Binding-protein-dependent transport system inner membrane component sake_RS02975 PF00005 ABC transporter sake_RS02985 PF00296 Luciferase-like monooxygenase sake_RS02990 PF02844 Phosphoribosylglycinamide synthetase, N domain sake_RS02990 PF02843 Phosphoribosylglycinamide synthetase, C domain sake_RS02990 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain sake_RS02995 PF01259 SAICAR synthetase sake_RS03000 PF07729 FCD domain sake_RS03000 PF00392 Bacterial regulatory proteins, gntR family sake_RS03005 PF02652 L-lactate permease sake_RS03010 PF02754 Cysteine-rich domain sake_RS03015 PF13183 4Fe-4S dicluster domain sake_RS03015 PF11870 Domain of unknown function (DUF3390) sake_RS03015 PF02589 LUD domain sake_RS03020 PF02589 LUD domain sake_RS03030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family sake_RS03035 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain sake_RS03035 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain sake_RS03050 PF00485 Phosphoribulokinase / Uridine kinase family sake_RS03055 PF00107 Zinc-binding dehydrogenase sake_RS03055 PF08240 Alcohol dehydrogenase GroES-like domain sake_RS03060 PF07690 Major Facilitator Superfamily sake_RS03075 PF00664 ABC transporter transmembrane region sake_RS03075 PF00005 ABC transporter sake_RS03080 PF00005 ABC transporter sake_RS03080 PF00664 ABC transporter transmembrane region sake_RS03085 PF00149 Calcineurin-like phosphoesterase sake_RS03090 PF00905 Penicillin binding protein transpeptidase domain sake_RS03090 PF00912 Transglycosylase sake_RS03100 PF01042 Endoribonuclease L-PSP sake_RS03110 PF00027 Cyclic nucleotide-binding domain sake_RS03110 PF13545 Crp-like helix-turn-helix domain sake_RS03115 PF02674 Colicin V production protein sake_RS03120 PF01220 Dehydroquinase class II sake_RS03125 PF00501 AMP-binding enzyme sake_RS03125 PF13193 AMP-binding enzyme C-terminal domain sake_RS03125 PF16177 Acetyl-coenzyme A synthetase N-terminus sake_RS03130 PF10576 Iron-sulfur binding domain of endonuclease III sake_RS03130 PF00633 Helix-hairpin-helix motif sake_RS03130 PF00730 HhH-GPD superfamily base excision DNA repair protein sake_RS03155 PF00437 Type II/IV secretion system protein sake_RS03185 PF00271 Helicase conserved C-terminal domain sake_RS03185 PF09369 Domain of unknown function (DUF1998) sake_RS03185 PF00270 DEAD/DEAH box helicase sake_RS03200 PF13409 Glutathione S-transferase, N-terminal domain sake_RS03205 PF05175 Methyltransferase small domain sake_RS03210 PF01131 DNA topoisomerase sake_RS03210 PF01751 Toprim domain sake_RS03210 PF13368 Topoisomerase C-terminal repeat sake_RS03215 PF02541 Ppx/GppA phosphatase family sake_RS03220 PF01261 Xylose isomerase-like TIM barrel sake_RS03225 PF14748 Pyrroline-5-carboxylate reductase dimerisation sake_RS03225 PF03807 NADP oxidoreductase coenzyme F420-dependent sake_RS03230 PF02254 TrkA-N domain sake_RS03230 PF02080 TrkA-C domain sake_RS03235 PF02386 Cation transport protein sake_RS03240 PF00850 Histone deacetylase domain sake_RS03245 PF01022 Bacterial regulatory protein, arsR family sake_RS03265 PF00300 Histidine phosphatase superfamily (branch 1) sake_RS03270 PF00085 Thioredoxin sake_RS03275 PF02683 Cytochrome C biogenesis protein transmembrane region sake_RS03285 PF01578 Cytochrome C assembly protein sake_RS03300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family sake_RS03300 PF03466 LysR substrate binding domain sake_RS03305 PF07690 Major Facilitator Superfamily sake_RS03310 PF01040 UbiA prenyltransferase family sake_RS03315 PF13193 AMP-binding enzyme C-terminal domain sake_RS03315 PF00501 AMP-binding enzyme sake_RS03320 PF00378 Enoyl-CoA hydratase/isomerase sake_RS03325 PF00474 Sodium:solute symporter family sake_RS03335 PF00749 tRNA synthetases class I (E and Q), catalytic domain sake_RS03350 PF18374 Enolase N-terminal domain-like sake_RS03350 PF13378 Enolase C-terminal domain-like sake_RS03360 PF00291 Pyridoxal-phosphate dependent enzyme sake_RS03385 PF00005 ABC transporter sake_RS03390 PF01032 FecCD transport family sake_RS03395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain sake_RS03400 PF03176 MMPL family sake_RS03405 PF00440 Bacterial regulatory proteins, tetR family sake_RS03410 PF03176 MMPL family sake_RS03420 PF01209 ubiE/COQ5 methyltransferase family sake_RS03425 PF01494 FAD binding domain sake_RS03430 PF00348 Polyprenyl synthetase sake_RS03435 PF07702 UTRA domain sake_RS03435 PF00392 Bacterial regulatory proteins, gntR family sake_RS03440 PF07992 Pyridine nucleotide-disulphide oxidoreductase sake_RS03445 PF00258 Flavodoxin sake_RS03450 PF00067 Cytochrome P450 sake_RS03460 PF00248 Aldo/keto reductase family sake_RS03470 PF00083 Sugar (and other) transporter sake_RS03515 PF06628 Catalase-related immune-responsive sake_RS03515 PF00199 Catalase sake_RS03520 PF01475 Ferric uptake regulator family sake_RS03525 PF01435 Peptidase family M48 sake_RS03530 PF04461 Protein of unknown function (DUF520) sake_RS03545 PF00085 Thioredoxin sake_RS03560 PF00270 DEAD/DEAH box helicase sake_RS03560 PF03880 DbpA RNA binding domain sake_RS03560 PF00271 Helicase conserved C-terminal domain sake_RS03575 PF13452 N-terminal half of MaoC dehydratase sake_RS03585 PF07690 Major Facilitator Superfamily sake_RS03590 PF01565 FAD binding domain sake_RS03590 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain sake_RS03605 PF02774 Semialdehyde dehydrogenase, dimerisation domain sake_RS03605 PF01118 Semialdehyde dehydrogenase, NAD binding domain sake_RS03610 PF00186 Dihydrofolate reductase sake_RS03615 PF00303 Thymidylate synthase sake_RS03620 PF00300 Histidine phosphatase superfamily (branch 1) sake_RS03620 PF00293 NUDIX domain sake_RS03625 PF02503 Polyphosphate kinase middle domain sake_RS03625 PF13089 Polyphosphate kinase N-terminal domain sake_RS03625 PF17941 Polyphosphate kinase C-terminal domain 1 sake_RS03625 PF13090 Polyphosphate kinase C-terminal domain 2 sake_RS03630 PF00486 Transcriptional regulatory protein, C terminal sake_RS03640 PF08768 Domain of unknown function (DUF1794) sake_RS03645 PF01571 Aminomethyltransferase folate-binding domain sake_RS03650 PF00365 Phosphofructokinase sake_RS03655 PF00155 Aminotransferase class I and II sake_RS03665 PF00584 SecE/Sec61-gamma subunits of protein translocation complex sake_RS03670 PF02357 Transcription termination factor nusG sake_RS03675 PF03946 Ribosomal protein L11, N-terminal domain sake_RS03675 PF00298 Ribosomal protein L11, RNA binding domain sake_RS03680 PF00687 Ribosomal protein L1p/L10e family sake_RS03685 PF00005 ABC transporter sake_RS03685 PF17912 MalK OB fold domain sake_RS03690 PF00466 Ribosomal protein L10 sake_RS03695 PF16320 Ribosomal protein L7/L12 dimerisation domain sake_RS03695 PF00542 Ribosomal protein L7/L12 C-terminal domain sake_RS03700 PF00994 Probable molybdopterin binding domain sake_RS03700 PF03453 MoeA N-terminal region (domain I and II) sake_RS03700 PF03454 MoeA C-terminal region (domain IV) sake_RS03715 PF04055 Radical SAM superfamily sake_RS03715 PF06463 Molybdenum Cofactor Synthesis C sake_RS03725 PF00528 Binding-protein-dependent transport system inner membrane component sake_RS03730 PF03454 MoeA C-terminal region (domain IV) sake_RS03730 PF03453 MoeA N-terminal region (domain I and II) sake_RS03730 PF00994 Probable molybdopterin binding domain sake_RS03735 PF01967 MoaC family sake_RS03740 PF00994 Probable molybdopterin binding domain sake_RS03750 PF07690 Major Facilitator Superfamily sake_RS03755 PF02347 Glycine cleavage system P-protein sake_RS03760 PF08669 Glycine cleavage T-protein C-terminal barrel domain sake_RS03760 PF01571 Aminomethyltransferase folate-binding domain sake_RS03765 PF03313 Serine dehydratase alpha chain sake_RS03765 PF03315 Serine dehydratase beta chain sake_RS03770 PF04563 RNA polymerase beta subunit sake_RS03770 PF00562 RNA polymerase Rpb2, domain 6 sake_RS03770 PF04560 RNA polymerase Rpb2, domain 7 sake_RS03770 PF10385 RNA polymerase beta subunit external 1 domain sake_RS03770 PF04565 RNA polymerase Rpb2, domain 3 sake_RS03770 PF04561 RNA polymerase Rpb2, domain 2 sake_RS03775 PF04998 RNA polymerase Rpb1, domain 5 sake_RS03775 PF04997 RNA polymerase Rpb1, domain 1 sake_RS03775 PF00623 RNA polymerase Rpb1, domain 2 sake_RS03775 PF05000 RNA polymerase Rpb1, domain 4 sake_RS03775 PF04983 RNA polymerase Rpb1, domain 3 sake_RS03780 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal sake_RS03780 PF00775 Dioxygenase sake_RS03790 PF00206 Lyase sake_RS03790 PF10397 Adenylosuccinate lyase C-terminus sake_RS03795 PF02627 Carboxymuconolactone decarboxylase family sake_RS03800 PF02803 Thiolase, C-terminal domain sake_RS03800 PF00108 Thiolase, N-terminal domain sake_RS03805 PF01144 Coenzyme A transferase sake_RS03810 PF01144 Coenzyme A transferase sake_RS03815 PF09339 IclR helix-turn-helix domain sake_RS03815 PF01614 Bacterial transcriptional regulator sake_RS03820 PF00164 Ribosomal protein S12/S23 sake_RS03825 PF00177 Ribosomal protein S7p/S5e sake_RS03830 PF00009 Elongation factor Tu GTP binding domain sake_RS03830 PF03144 Elongation factor Tu domain 2 sake_RS03830 PF14492 Elongation Factor G, domain II sake_RS03830 PF00679 Elongation factor G C-terminus sake_RS03830 PF03764 Elongation factor G, domain IV sake_RS03835 PF03143 Elongation factor Tu C-terminal domain sake_RS03835 PF00009 Elongation factor Tu GTP binding domain sake_RS03835 PF03144 Elongation factor Tu domain 2 sake_RS03840 PF00732 GMC oxidoreductase sake_RS03840 PF05199 GMC oxidoreductase sake_RS03850 PF00338 Ribosomal protein S10p/S20e sake_RS03855 PF00297 Ribosomal protein L3 sake_RS03860 PF00573 Ribosomal protein L4/L1 family sake_RS03865 PF00276 Ribosomal protein L23 sake_RS03870 PF03947 Ribosomal Proteins L2, C-terminal domain sake_RS03870 PF00181 Ribosomal Proteins L2, RNA binding domain sake_RS03875 PF00203 Ribosomal protein S19 sake_RS03880 PF00237 Ribosomal protein L22p/L17e sake_RS03885 PF07650 KH domain sake_RS03885 PF00189 Ribosomal protein S3, C-terminal domain sake_RS03890 PF00252 Ribosomal protein L16p/L10e sake_RS03895 PF00831 Ribosomal L29 protein sake_RS03900 PF00366 Ribosomal protein S17 sake_RS03905 PF11806 Domain of unknown function (DUF3327) sake_RS03905 PF00756 Putative esterase sake_RS03915 PF01032 FecCD transport family sake_RS03920 PF01032 FecCD transport family sake_RS03925 PF00005 ABC transporter sake_RS03930 PF01497 Periplasmic binding protein sake_RS03935 PF00975 Thioesterase domain sake_RS03935 PF00550 Phosphopantetheine attachment site sake_RS03935 PF00501 AMP-binding enzyme sake_RS03935 PF00668 Condensation domain sake_RS03935 PF13193 AMP-binding enzyme C-terminal domain sake_RS03940 PF00550 Phosphopantetheine attachment site sake_RS03940 PF13193 AMP-binding enzyme C-terminal domain sake_RS03940 PF00668 Condensation domain sake_RS03940 PF00975 Thioesterase domain sake_RS03940 PF00501 AMP-binding enzyme sake_RS03945 PF07690 Major Facilitator Superfamily sake_RS03965 PF01032 FecCD transport family sake_RS03970 PF01032 FecCD transport family sake_RS03975 PF00005 ABC transporter sake_RS03985 PF00238 Ribosomal protein L14p/L23e sake_RS03990 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 sake_RS03995 PF00281 Ribosomal protein L5 sake_RS03995 PF00673 ribosomal L5P family C-terminus sake_RS04000 PF00410 Ribosomal protein S8 sake_RS04005 PF00347 Ribosomal protein L6 sake_RS04010 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast sake_RS04015 PF03719 Ribosomal protein S5, C-terminal domain sake_RS04015 PF00333 Ribosomal protein S5, N-terminal domain sake_RS04020 PF00327 Ribosomal protein L30p/L7e sake_RS04025 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A sake_RS04030 PF00344 SecY translocase sake_RS04040 PF00557 Metallopeptidase family M24 sake_RS04045 PF04055 Radical SAM superfamily sake_RS04050 PF01176 Translation initiation factor 1A / IF-1 sake_RS04055 PF00444 Ribosomal protein L36 sake_RS04060 PF00416 Ribosomal protein S13/S18 sake_RS04065 PF00411 Ribosomal protein S11 sake_RS04070 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain sake_RS04070 PF01000 RNA polymerase Rpb3/RpoA insert domain sake_RS04070 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain sake_RS04075 PF01196 Ribosomal protein L17 sake_RS04080 PF01416 tRNA pseudouridine synthase sake_RS04085 PF00572 Ribosomal protein L13 sake_RS04090 PF00380 Ribosomal protein S9/S16 sake_RS04095 PF03976 Polyphosphate kinase 2 (PPK2) sake_RS04100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I sake_RS04100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II sake_RS04100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III sake_RS04100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain sake_RS04105 PF01741 Large-conductance mechanosensitive channel, MscL sake_RS04110 PF00485 Phosphoribulokinase / Uridine kinase family sake_RS04115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 sake_RS04115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit sake_RS04115 PF02378 Phosphotransferase system, EIIC sake_RS04120 PF01232 Mannitol dehydrogenase Rossmann domain sake_RS04120 PF08125 Mannitol dehydrogenase C-terminal domain sake_RS04125 PF01380 SIS domain sake_RS04130 PF01648 4'-phosphopantetheinyl transferase superfamily sake_RS04135 PF01256 Carbohydrate kinase sake_RS04135 PF03853 YjeF-related protein N-terminus sake_RS04140 PF02397 Bacterial sugar transferase sake_RS04150 PF00534 Glycosyl transferases group 1 sake_RS04150 PF13439 Glycosyltransferase Family 4 sake_RS04155 PF00842 Alanine racemase, C-terminal domain sake_RS04155 PF01168 Alanine racemase, N-terminal domain sake_RS04160 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE sake_RS04165 PF00814 Glycoprotease family sake_RS04170 PF00583 Acetyltransferase (GNAT) family sake_RS04175 PF00814 Glycoprotease family sake_RS04180 PF04107 Glutamate-cysteine ligase family 2(GCS2) sake_RS04185 PF18096 THUMP domain-like sake_RS04190 PF00166 Chaperonin 10 Kd subunit sake_RS04195 PF00118 TCP-1/cpn60 chaperonin family sake_RS04200 PF01757 Acyltransferase family sake_RS04205 PF00478 IMP dehydrogenase / GMP reductase domain sake_RS04205 PF00571 CBS domain sake_RS04210 PF00478 IMP dehydrogenase / GMP reductase domain sake_RS04225 PF00117 Glutamine amidotransferase class-I sake_RS04225 PF00958 GMP synthase C terminal domain sake_RS04225 PF02540 NAD synthase sake_RS04245 PF01812 5-formyltetrahydrofolate cyclo-ligase family sake_RS04250 PF00483 Nucleotidyl transferase sake_RS04280 PF00924 Mechanosensitive ion channel sake_RS04285 PF00293 NUDIX domain sake_RS04300 PF02609 Exonuclease VII small subunit sake_RS04305 PF13742 OB-fold nucleic acid binding domain sake_RS04305 PF02601 Exonuclease VII, large subunit sake_RS04315 PF02646 RmuC family sake_RS04335 PF13732 Domain of unknown function (DUF4162) sake_RS04335 PF00005 ABC transporter sake_RS04345 PF06071 Protein of unknown function (DUF933) sake_RS04345 PF01926 50S ribosome-binding GTPase sake_RS04355 PF16859 Tetracyclin repressor-like, C-terminal domain sake_RS04355 PF00440 Bacterial regulatory proteins, tetR family sake_RS04410 PF00106 short chain dehydrogenase sake_RS04415 PF03167 Uracil DNA glycosylase superfamily sake_RS04430 PF02705 K+ potassium transporter sake_RS04450 PF00296 Luciferase-like monooxygenase sake_RS04455 PF00581 Rhodanese-like domain sake_RS04460 PF02657 Fe-S metabolism associated domain sake_RS04465 PF08534 Redoxin sake_RS04470 PF00324 Amino acid permease sake_RS04475 PF00083 Sugar (and other) transporter sake_RS04480 PF09557 Domain of unknown function (DUF2382) sake_RS04480 PF11181 Heat induced stress protein YflT sake_RS04485 PF03971 Monomeric isocitrate dehydrogenase sake_RS04495 PF00293 NUDIX domain sake_RS04505 PF00342 Phosphoglucose isomerase sake_RS04510 PF02028 BCCT, betaine/carnitine/choline family transporter sake_RS04515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle sake_RS04520 PF00528 Binding-protein-dependent transport system inner membrane component sake_RS04525 PF12911 N-terminal TM domain of oligopeptide transport permease C sake_RS04525 PF00528 Binding-protein-dependent transport system inner membrane component sake_RS04530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region sake_RS04530 PF00005 ABC transporter sake_RS04540 PF02585 GlcNAc-PI de-N-acetylase sake_RS04545 PF00037 4Fe-4S binding domain sake_RS04550 PF00155 Aminotransferase class I and II sake_RS04555 PF00285 Citrate synthase, C-terminal domain sake_RS04560 PF16363 GDP-mannose 4,6 dehydratase sake_RS04565 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle sake_RS04565 PF14602 Hexapeptide repeat of succinyl-transferase sake_RS04570 PF01546 Peptidase family M20/M25/M40 sake_RS04570 PF07687 Peptidase dimerisation domain sake_RS04595 PF10609 NUBPL iron-transfer P-loop NTPase sake_RS04595 PF01883 Iron-sulfur cluster assembly protein sake_RS04605 PF03448 MgtE intracellular N domain sake_RS04605 PF00571 CBS domain sake_RS04605 PF01769 Divalent cation transporter sake_RS04615 PF00557 Metallopeptidase family M24 sake_RS04615 PF05195 Aminopeptidase P, N-terminal domain sake_RS04620 PF07733 Bacterial DNA polymerase III alpha NTPase domain sake_RS04620 PF17657 Bacterial DNA polymerase III alpha subunit finger domain sake_RS04620 PF14579 Helix-hairpin-helix motif sake_RS04620 PF02811 PHP domain sake_RS04625 PF01555 DNA methylase sake_RS04630 PF00270 DEAD/DEAH box helicase sake_RS04630 PF00271 Helicase conserved C-terminal domain sake_RS04640 PF08361 MAATS-type transcriptional repressor, C-terminal region sake_RS04640 PF00440 Bacterial regulatory proteins, tetR family sake_RS04645 PF01488 Shikimate / quinate 5-dehydrogenase sake_RS04645 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain sake_RS04645 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain sake_RS04650 PF01208 Uroporphyrinogen decarboxylase (URO-D) sake_RS04670 PF03900 Porphobilinogen deaminase, C-terminal domain sake_RS04670 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain sake_RS04680 PF00490 Delta-aminolevulinic acid dehydratase sake_RS04685 PF00202 Aminotransferase class-III sake_RS04700 PF13361 UvrD-like helicase C-terminal domain sake_RS04700 PF00580 UvrD/REP helicase N-terminal domain sake_RS04710 PF00293 NUDIX domain sake_RS04710 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain sake_RS04710 PF09297 NADH pyrophosphatase zinc ribbon domain sake_RS04715 PF13361 UvrD-like helicase C-terminal domain sake_RS04715 PF00580 UvrD/REP helicase N-terminal domain sake_RS04715 PF00570 HRDC domain sake_RS04735 PF13180 PDZ domain sake_RS04735 PF05362 Lon protease (S16) C-terminal proteolytic domain sake_RS04740 PF03699 Uncharacterised protein family (UPF0182) sake_RS04750 PF01022 Bacterial regulatory protein, arsR family sake_RS04755 PF04012 PspA/IM30 family sake_RS04765 PF13180 PDZ domain sake_RS04770 PF00588 SpoU rRNA Methylase family sake_RS04775 PF00266 Aminotransferase class-V sake_RS04785 PF01817 Chorismate mutase type II sake_RS04785 PF02153 Prephenate dehydrogenase sake_RS04795 PF00072 Response regulator receiver domain sake_RS04795 PF00486 Transcriptional regulatory protein, C terminal sake_RS04800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sake_RS04800 PF00672 HAMP domain sake_RS04800 PF00512 His Kinase A (phospho-acceptor) domain sake_RS04805 PF10646 Sporulation and spore germination sake_RS04805 PF10647 Lipoprotein LpqB beta-propeller domain sake_RS04810 PF00156 Phosphoribosyl transferase domain sake_RS04815 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus sake_RS04815 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein sake_RS04820 PF07517 SecA DEAD-like domain sake_RS04820 PF07516 SecA Wing and Scaffold domain sake_RS04820 PF01043 SecA preprotein cross-linking domain sake_RS04840 PF12282 Signal transduction histidine kinase sake_RS04840 PF07568 Histidine kinase sake_RS04840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sake_RS04845 PF02467 Transcription factor WhiB sake_RS04855 PF01580 FtsK/SpoIIIE family sake_RS04855 PF12538 DNA transporter sake_RS04860 PF03275 UDP-galactopyranose mutase sake_RS04865 PF17994 Galactofuranosyltransferase 2 N-terminal sake_RS04875 PF14524 Wzt C-terminal domain sake_RS04875 PF00005 ABC transporter sake_RS04885 PF01668 SmpB protein sake_RS04890 PF03462 PCRF domain sake_RS04890 PF00472 RF-1 domain sake_RS04905 PF00459 Inositol monophosphatase family sake_RS04910 PF03193 RsgA GTPase sake_RS04915 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) sake_RS04925 PF08281 Sigma-70, region 4 sake_RS04925 PF04542 Sigma-70 region 2 sake_RS04940 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) sake_RS04940 PF16078 2-oxoglutarate dehydrogenase N-terminus sake_RS04940 PF02779 Transketolase, pyrimidine binding domain sake_RS04940 PF16870 2-oxoglutarate dehydrogenase C-terminal sake_RS04940 PF00676 Dehydrogenase E1 component sake_RS04945 PF00478 IMP dehydrogenase / GMP reductase domain sake_RS04945 PF00571 CBS domain sake_RS04950 PF03471 Transporter associated domain sake_RS04950 PF01595 Cyclin M transmembrane N-terminal domain sake_RS04950 PF00571 CBS domain sake_RS04955 PF01595 Cyclin M transmembrane N-terminal domain sake_RS04955 PF00571 CBS domain sake_RS04965 PF00005 ABC transporter sake_RS04970 PF00950 ABC 3 transport family sake_RS04985 PF01230 HIT domain sake_RS04990 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold sake_RS04990 PF04408 Helicase associated domain (HA2) sake_RS04990 PF11898 Domain of unknown function (DUF3418) sake_RS04990 PF00271 Helicase conserved C-terminal domain sake_RS04990 PF00270 DEAD/DEAH box helicase sake_RS04995 PF07859 alpha/beta hydrolase fold sake_RS05005 PF00547 Urease, gamma subunit sake_RS05010 PF00699 Urease beta subunit sake_RS05015 PF01979 Amidohydrolase family sake_RS05015 PF00449 Urease alpha-subunit, N-terminal domain sake_RS05020 PF02814 UreE urease accessory protein, N-terminal domain sake_RS05020 PF05194 UreE urease accessory protein, C-terminal domain sake_RS05025 PF01730 UreF sake_RS05030 PF02492 CobW/HypB/UreG, nucleotide-binding domain sake_RS05035 PF01774 UreD urease accessory protein sake_RS05040 PF03824 High-affinity nickel-transport protein sake_RS05050 PF03485 Arginyl tRNA synthetase N terminal domain sake_RS05050 PF00750 tRNA synthetases class I (R) sake_RS05050 PF05746 DALR anticodon binding domain sake_RS05055 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain sake_RS05055 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain sake_RS05060 PF01842 ACT domain sake_RS05060 PF00742 Homoserine dehydrogenase sake_RS05060 PF03447 Homoserine dehydrogenase, NAD binding domain sake_RS05065 PF00291 Pyridoxal-phosphate dependent enzyme sake_RS05070 PF00288 GHMP kinases N terminal domain sake_RS05075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain sake_RS05075 PF07498 Rho termination factor, N-terminal domain sake_RS05075 PF07497 Rho termination factor, RNA-binding domain sake_RS05080 PF03462 PCRF domain sake_RS05080 PF00472 RF-1 domain sake_RS05085 PF05175 Methyltransferase small domain sake_RS05085 PF17827 PrmC N-terminal domain sake_RS05090 PF01300 Telomere recombination sake_RS05105 PF02719 Polysaccharide biosynthesis protein sake_RS05110 PF00953 Glycosyl transferase family 4 sake_RS05125 PF00119 ATP synthase A chain sake_RS05130 PF00137 ATP synthase subunit C sake_RS05135 PF00430 ATP synthase B/B' CF(0) sake_RS05140 PF00213 ATP synthase delta (OSCP) subunit sake_RS05145 PF02874 ATP synthase alpha/beta family, beta-barrel domain sake_RS05145 PF00306 ATP synthase alpha/beta chain, C terminal domain sake_RS05145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain sake_RS05150 PF00231 ATP synthase sake_RS05155 PF02874 ATP synthase alpha/beta family, beta-barrel domain sake_RS05155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain sake_RS05160 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain sake_RS05165 PF01939 Endonuclease NucS sake_RS05180 PF01594 AI-2E family transporter sake_RS05190 PF00005 ABC transporter sake_RS05190 PF13732 Domain of unknown function (DUF4162) sake_RS05205 PF04851 Type III restriction enzyme, res subunit sake_RS05210 PF00857 Isochorismatase family sake_RS05215 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain sake_RS05215 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain sake_RS05220 PF02617 ATP-dependent Clp protease adaptor protein ClpS sake_RS05230 PF01177 Asp/Glu/Hydantoin racemase sake_RS05235 PF12706 Beta-lactamase superfamily domain sake_RS05235 PF00753 Metallo-beta-lactamase superfamily sake_RS05240 PF03725 3' exoribonuclease family, domain 2 sake_RS05240 PF01138 3' exoribonuclease family, domain 1 sake_RS05245 PF01725 Ham1 family sake_RS05260 PF00149 Calcineurin-like phosphoesterase sake_RS05260 PF12320 Type 5 capsule protein repressor C-terminal domain sake_RS05265 PF13476 AAA domain sake_RS05275 PF00753 Metallo-beta-lactamase superfamily sake_RS05280 PF00107 Zinc-binding dehydrogenase sake_RS05280 PF08240 Alcohol dehydrogenase GroES-like domain sake_RS05290 PF03631 Virulence factor BrkB sake_RS05295 PF06039 Malate:quinone oxidoreductase (Mqo) sake_RS05300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle sake_RS05310 PF00578 AhpC/TSA family sake_RS05335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain sake_RS05335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain sake_RS05335 PF00205 Thiamine pyrophosphate enzyme, central domain sake_RS05340 PF10369 Small subunit of acetolactate synthase sake_RS05345 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain sake_RS05345 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain sake_RS05350 PF01842 ACT domain sake_RS05350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain sake_RS05350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain sake_RS05355 PF09334 tRNA synthetases class I (M) sake_RS05355 PF08264 Anticodon-binding domain of tRNA sake_RS05370 PF00180 Isocitrate/isopropylmalate dehydrogenase sake_RS05375 PF01063 Amino-transferase class IV sake_RS05380 PF01557 Fumarylacetoacetate (FAA) hydrolase family sake_RS05385 PF00749 tRNA synthetases class I (E and Q), catalytic domain sake_RS05400 PF01614 Bacterial transcriptional regulator sake_RS05400 PF09339 IclR helix-turn-helix domain sake_RS05405 PF00330 Aconitase family (aconitate hydratase) sake_RS05410 PF00694 Aconitase C-terminal domain sake_RS05415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) sake_RS05425 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus sake_RS05425 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus sake_RS05430 PF01820 D-ala D-ala ligase N-terminus sake_RS05430 PF07478 D-ala D-ala ligase C-terminus sake_RS05445 PF00586 AIR synthase related protein, N-terminal domain sake_RS05445 PF02769 AIR synthase related protein, C-terminal domain sake_RS05450 PF13684 Dihydroxyacetone kinase family sake_RS05450 PF02734 DAK2 domain sake_RS05455 PF00270 DEAD/DEAH box helicase sake_RS05455 PF00271 Helicase conserved C-terminal domain sake_RS05455 PF17191 RecG wedge domain sake_RS05465 PF00155 Aminotransferase class I and II sake_RS05470 PF01467 Cytidylyltransferase-like sake_RS05475 PF02620 Large ribosomal RNA subunit accumulation protein YceD sake_RS05480 PF01783 Ribosomal L32p protein family sake_RS05485 PF00035 Double-stranded RNA binding motif sake_RS05485 PF14622 Ribonuclease-III-like sake_RS05490 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain sake_RS05490 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain sake_RS05490 PF06827 Zinc finger found in FPG and IleRS sake_RS05510 PF13411 MerR HTH family regulatory protein sake_RS05515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain sake_RS05515 PF07992 Pyridine nucleotide-disulphide oxidoreductase sake_RS05525 PF13905 Thioredoxin-like sake_RS05530 PF02683 Cytochrome C biogenesis protein transmembrane region sake_RS05535 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain sake_RS05535 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain sake_RS05535 PF06827 Zinc finger found in FPG and IleRS sake_RS05550 PF01022 Bacterial regulatory protein, arsR family sake_RS05570 PF01451 Low molecular weight phosphotyrosine protein phosphatase sake_RS05585 PF01451 Low molecular weight phosphotyrosine protein phosphatase sake_RS05590 PF01451 Low molecular weight phosphotyrosine protein phosphatase sake_RS05595 PF01758 Sodium Bile acid symporter family sake_RS05610 PF03551 Transcriptional regulator PadR-like family sake_RS05615 PF13520 Amino acid permease sake_RS05630 PF01022 Bacterial regulatory protein, arsR family sake_RS05650 PF02583 Metal-sensitive transcriptional repressor sake_RS05660 PF07563 Protein of unknown function (DUF1541) sake_RS05670 PF00403 Heavy-metal-associated domain sake_RS05680 PF00403 Heavy-metal-associated domain sake_RS05690 PF07731 Multicopper oxidase sake_RS05690 PF00394 Multicopper oxidase sake_RS05690 PF07732 Multicopper oxidase sake_RS05695 PF07690 Major Facilitator Superfamily sake_RS05705 PF01022 Bacterial regulatory protein, arsR family sake_RS05710 PF16916 Dimerisation domain of Zinc Transporter sake_RS05710 PF01545 Cation efflux family sake_RS05715 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family sake_RS05720 PF00501 AMP-binding enzyme sake_RS05725 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III sake_RS05725 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal sake_RS05730 PF02463 RecF/RecN/SMC N terminal domain sake_RS05730 PF06470 SMC proteins Flexible Hinge Domain sake_RS05735 PF07690 Major Facilitator Superfamily sake_RS05740 PF02881 SRP54-type protein, helical bundle domain sake_RS05740 PF00448 SRP54-type protein, GTPase domain sake_RS05745 PF00909 Ammonium Transporter Family sake_RS05750 PF00543 Nitrogen regulatory protein P-II sake_RS05755 PF02881 SRP54-type protein, helical bundle domain sake_RS05755 PF00448 SRP54-type protein, GTPase domain sake_RS05755 PF02978 Signal peptide binding domain sake_RS05770 PF07730 Histidine kinase sake_RS05775 PF00072 Response regulator receiver domain sake_RS05775 PF00196 Bacterial regulatory proteins, luxR family sake_RS05780 PF00886 Ribosomal protein S16 sake_RS05790 PF05239 PRC-barrel domain sake_RS05790 PF01782 RimM N-terminal domain sake_RS05795 PF01746 tRNA (Guanine-1)-methyltransferase sake_RS05800 PF01245 Ribosomal protein L19 sake_RS05805 PF10502 Signal peptidase, peptidase S26 sake_RS05810 PF10502 Signal peptidase, peptidase S26 sake_RS05815 PF01351 Ribonuclease HII sake_RS05820 PF02021 Uncharacterised protein family UPF0102 sake_RS05825 PF01078 Magnesium chelatase, subunit ChlI sake_RS05825 PF13335 Magnesium chelatase, subunit ChlI C-terminal sake_RS05830 PF17782 DprA winged helix domain sake_RS05830 PF02481 DNA recombination-mediator protein A sake_RS05840 PF00589 Phage integrase family sake_RS05840 PF02899 Phage integrase, N-terminal SAM-like domain sake_RS05850 PF02801 Beta-ketoacyl synthase, C-terminal domain sake_RS05850 PF00109 Beta-ketoacyl synthase, N-terminal domain sake_RS05855 PF00550 Phosphopantetheine attachment site sake_RS05860 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III sake_RS05860 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal sake_RS05865 PF00698 Acyl transferase domain sake_RS05870 PF17831 Pyruvate dehydrogenase E1 component middle domain sake_RS05870 PF00456 Transketolase, thiamine diphosphate binding domain sake_RS05875 PF11253 Protein of unknown function (DUF3052) sake_RS05885 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase sake_RS05885 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain sake_RS05890 PF00132 Bacterial transferase hexapeptide (six repeats) sake_RS05895 PF00291 Pyridoxal-phosphate dependent enzyme sake_RS05900 PF01625 Peptide methionine sulfoxide reductase sake_RS05905 PF01784 NIF3 (NGG1p interacting factor 3) sake_RS05915 PF03883 Peroxide stress protein YaaA sake_RS05920 PF01327 Polypeptide deformylase sake_RS05925 PF04545 Sigma-70, region 4 sake_RS05925 PF04542 Sigma-70 region 2 sake_RS05935 PF02632 BioY family sake_RS05940 PF00501 AMP-binding enzyme sake_RS05940 PF13193 AMP-binding enzyme C-terminal domain sake_RS05945 PF02803 Thiolase, C-terminal domain sake_RS05945 PF00108 Thiolase, N-terminal domain sake_RS05950 PF00005 ABC transporter sake_RS05965 PF00929 Exonuclease sake_RS05990 PF00436 Single-strand binding protein family sake_RS06000 PF12848 ABC transporter sake_RS06000 PF00005 ABC transporter sake_RS06015 PF01152 Bacterial-like globin sake_RS06020 PF01433 Peptidase family M1 domain sake_RS06020 PF11838 ERAP1-like C-terminal domain sake_RS06025 PF02502 Ribose/Galactose Isomerase sake_RS06030 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain sake_RS06030 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain sake_RS06030 PF06827 Zinc finger found in FPG and IleRS sake_RS06045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase sake_RS06045 PF05697 Bacterial trigger factor protein (TF) sake_RS06045 PF05698 Bacterial trigger factor protein (TF) C-terminus sake_RS06050 PF00574 Clp protease sake_RS06055 PF00574 Clp protease sake_RS06060 PF10431 C-terminal, D2-small domain, of ClpB protein sake_RS06060 PF07724 AAA domain (Cdc48 subfamily) sake_RS06060 PF06689 ClpX C4-type zinc finger sake_RS06070 PF01323 DSBA-like thioredoxin domain sake_RS06080 PF00133 tRNA synthetases class I (I, L, M and V) sake_RS06080 PF08264 Anticodon-binding domain of tRNA sake_RS06085 PF00106 short chain dehydrogenase sake_RS06095 PF01077 Nitrite and sulphite reductase 4Fe-4S domain sake_RS06095 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain sake_RS06100 PF01507 Phosphoadenosine phosphosulfate reductase family sake_RS06105 PF01507 Phosphoadenosine phosphosulfate reductase family sake_RS06110 PF00009 Elongation factor Tu GTP binding domain sake_RS06115 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases sake_RS06115 PF14824 Sirohaem biosynthesis protein central sake_RS06115 PF10414 Sirohaem synthase dimerisation region sake_RS06125 PF08264 Anticodon-binding domain of tRNA sake_RS06125 PF00133 tRNA synthetases class I (I, L, M and V) sake_RS06130 PF08245 Mur ligase middle domain sake_RS06130 PF02875 Mur ligase family, glutamate ligase domain sake_RS06145 PF00334 Nucleoside diphosphate kinase sake_RS06155 PF10150 Ribonuclease E/G family sake_RS06160 PF00829 Ribosomal prokaryotic L21 protein sake_RS06165 PF01016 Ribosomal L27 protein sake_RS06170 PF09269 Domain of unknown function (DUF1967) sake_RS06170 PF01926 50S ribosome-binding GTPase sake_RS06170 PF01018 GTP1/OBG sake_RS06175 PF00696 Amino acid kinase family sake_RS06175 PF01472 PUA domain sake_RS06180 PF00171 Aldehyde dehydrogenase family sake_RS06190 PF01467 Cytidylyltransferase-like sake_RS06240 PF08240 Alcohol dehydrogenase GroES-like domain sake_RS06240 PF00109 Beta-ketoacyl synthase, N-terminal domain sake_RS06240 PF00550 Phosphopantetheine attachment site sake_RS06240 PF02801 Beta-ketoacyl synthase, C-terminal domain sake_RS06240 PF00698 Acyl transferase domain sake_RS06240 PF08990 Erythronolide synthase docking sake_RS06240 PF08659 KR domain sake_RS06240 PF14765 Polyketide synthase dehydratase sake_RS06240 PF16197 Ketoacyl-synthetase C-terminal extension sake_RS06245 PF00248 Aldo/keto reductase family sake_RS06255 PF01297 Zinc-uptake complex component A periplasmic sake_RS06260 PF00005 ABC transporter sake_RS06265 PF00950 ABC 3 transport family sake_RS06270 PF02742 Iron dependent repressor, metal binding and dimerisation domain sake_RS06270 PF00950 ABC 3 transport family sake_RS06290 PF07972 NrdI Flavodoxin like sake_RS06295 PF08343 Ribonucleotide reductase N-terminal sake_RS06295 PF00317 Ribonucleotide reductase, all-alpha domain sake_RS06295 PF02867 Ribonucleotide reductase, barrel domain sake_RS06300 PF00268 Ribonucleotide reductase, small chain sake_RS06310 PF01740 STAS domain sake_RS06310 PF00916 Sulfate permease family sake_RS06330 PF00561 alpha/beta hydrolase fold sake_RS06335 PF00270 DEAD/DEAH box helicase sake_RS06335 PF08148 DSHCT (NUC185) domain sake_RS06335 PF00271 Helicase conserved C-terminal domain sake_RS06340 PF01268 Formate--tetrahydrofolate ligase sake_RS06345 PF00753 Metallo-beta-lactamase superfamily sake_RS06350 PF00005 ABC transporter sake_RS06350 PF17760 UvrA interaction domain sake_RS06350 PF17755 UvrA DNA-binding domain sake_RS06355 PF13419 Haloacid dehalogenase-like hydrolase sake_RS06365 PF01541 GIY-YIG catalytic domain sake_RS06365 PF08459 UvrC Helix-hairpin-helix N-terminal sake_RS06365 PF02151 UvrB/uvrC motif sake_RS06370 PF03668 P-loop ATPase protein family sake_RS06375 PF01933 Uncharacterised protein family UPF0052 sake_RS06380 PF14527 WhiA LAGLIDADG-like domain sake_RS06380 PF10298 WhiA N-terminal LAGLIDADG-like domain sake_RS06380 PF02650 WhiA C-terminal HTH domain sake_RS06385 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain sake_RS06385 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain sake_RS06390 PF00162 Phosphoglycerate kinase sake_RS06395 PF00121 Triosephosphate isomerase sake_RS06400 PF03840 Preprotein translocase SecG subunit sake_RS06405 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase sake_RS06415 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain sake_RS06415 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain sake_RS06420 PF00923 Transaldolase/Fructose-6-phosphate aldolase sake_RS06425 PF02780 Transketolase, C-terminal domain sake_RS06425 PF02779 Transketolase, pyrimidine binding domain sake_RS06425 PF00456 Transketolase, thiamine diphosphate binding domain sake_RS06430 PF01040 UbiA prenyltransferase family sake_RS06445 PF00005 ABC transporter sake_RS06455 PF01458 Uncharacterized protein family (UPF0051) sake_RS06460 PF01458 Uncharacterized protein family (UPF0051) sake_RS06465 PF00005 ABC transporter sake_RS06470 PF01883 Iron-sulfur cluster assembly protein sake_RS06480 PF16326 ABC transporter C-terminal domain sake_RS06480 PF12848 ABC transporter sake_RS06480 PF00005 ABC transporter sake_RS06515 PF00005 ABC transporter sake_RS06525 PF00588 SpoU rRNA Methylase family sake_RS06530 PF01197 Ribosomal protein L31 sake_RS06535 PF03816 Cell envelope-related transcriptional attenuator domain sake_RS06540 PF03109 ABC1 family sake_RS06550 PF11838 ERAP1-like C-terminal domain sake_RS06550 PF01433 Peptidase family M1 domain sake_RS06565 PF02803 Thiolase, C-terminal domain sake_RS06565 PF00108 Thiolase, N-terminal domain sake_RS06585 PF00056 lactate/malate dehydrogenase, NAD binding domain sake_RS06585 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain sake_RS06595 PF02673 Bacitracin resistance protein BacA sake_RS06600 PF01406 tRNA synthetases class I (C) catalytic domain sake_RS06605 PF02163 Peptidase family M50 sake_RS06605 PF00571 CBS domain sake_RS06610 PF08704 tRNA methyltransferase complex GCD14 subunit sake_RS06615 PF17758 Proteasomal ATPase OB N-terminal domain sake_RS06615 PF16450 Proteasomal ATPase OB C-terminal domain sake_RS06615 PF00004 ATPase family associated with various cellular activities (AAA) sake_RS06620 PF03136 Pup-ligase protein sake_RS06625 PF05639 Pup-like protein sake_RS06630 PF03136 Pup-ligase protein sake_RS06635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase sake_RS06640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase sake_RS06655 PF02416 mttA/Hcf106 family sake_RS06660 PF00902 Sec-independent protein translocase protein (TatC) sake_RS06665 PF08148 DSHCT (NUC185) domain sake_RS06665 PF00270 DEAD/DEAH box helicase sake_RS06665 PF00271 Helicase conserved C-terminal domain sake_RS06670 PF01979 Amidohydrolase family sake_RS06675 PF00535 Glycosyl transferase family 2 sake_RS06680 PF13397 RNA polymerase-binding protein sake_RS06685 PF01145 SPFH domain / Band 7 family sake_RS06700 PF02885 Glycosyl transferase family, helical bundle domain sake_RS06700 PF00591 Glycosyl transferase family, a/b domain sake_RS06705 PF00510 Cytochrome c oxidase subunit III sake_RS06710 PF13442 Cytochrome C oxidase, cbb3-type, subunit III sake_RS06710 PF00034 Cytochrome c sake_RS06715 PF00355 Rieske [2Fe-2S] domain sake_RS06720 PF13631 Cytochrome b(N-terminal)/b6/petB sake_RS06725 PF12270 Cytochrome c oxidase subunit IV sake_RS06730 PF00115 Cytochrome C and Quinol oxidase polypeptide I sake_RS06735 PF00116 Cytochrome C oxidase subunit II, periplasmic domain sake_RS06740 PF01521 Iron-sulphur cluster biosynthesis sake_RS06745 PF01546 Peptidase family M20/M25/M40 sake_RS06745 PF07687 Peptidase dimerisation domain sake_RS06750 PF11241 Protein of unknown function (DUF3043) sake_RS06755 PF01180 Dihydroorotate dehydrogenase sake_RS06760 PF01255 Putative undecaprenyl diphosphate synthase sake_RS06765 PF02565 Recombination protein O C terminal sake_RS06765 PF11967 Recombination protein O N terminal sake_RS06770 PF00682 HMGL-like sake_RS06770 PF08502 LeuA allosteric (dimerisation) domain sake_RS06775 PF03816 Cell envelope-related transcriptional attenuator domain sake_RS06780 PF01926 50S ribosome-binding GTPase sake_RS06780 PF07650 KH domain sake_RS06785 PF01595 Cyclin M transmembrane N-terminal domain sake_RS06785 PF03471 Transporter associated domain sake_RS06785 PF00571 CBS domain sake_RS06790 PF02130 Uncharacterized protein family UPF0054 sake_RS06795 PF02562 PhoH-like protein sake_RS06810 PF00684 DnaJ central domain sake_RS06810 PF00226 DnaJ domain sake_RS06810 PF01556 DnaJ C terminal domain sake_RS06815 PF01628 HrcA protein C terminal domain sake_RS06815 PF08220 DeoR-like helix-turn-helix domain sake_RS06830 PF04055 Radical SAM superfamily sake_RS06835 PF06421 GTP-binding protein LepA C-terminus sake_RS06835 PF03144 Elongation factor Tu domain 2 sake_RS06835 PF00009 Elongation factor Tu GTP binding domain sake_RS06835 PF00679 Elongation factor G C-terminus sake_RS06845 PF01649 Ribosomal protein S20 sake_RS06870 PF01979 Amidohydrolase family sake_RS06885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family sake_RS06885 PF03466 LysR substrate binding domain sake_RS06890 PF03328 HpcH/HpaI aldolase/citrate lyase family sake_RS06910 PF10531 SLBB domain sake_RS06915 PF02645 Uncharacterised protein, DegV family COG1307 sake_RS06920 PF13603 Leucyl-tRNA synthetase, Domain 2 sake_RS06920 PF00133 tRNA synthetases class I (I, L, M and V) sake_RS06920 PF09334 tRNA synthetases class I (M) sake_RS06920 PF08264 Anticodon-binding domain of tRNA sake_RS06925 PF00561 alpha/beta hydrolase fold sake_RS06935 PF17764 3′ DNA-binding domain (3′BD) sake_RS06940 PF02773 S-adenosylmethionine synthetase, C-terminal domain sake_RS06940 PF00438 S-adenosylmethionine synthetase, N-terminal domain sake_RS06940 PF02772 S-adenosylmethionine synthetase, central domain sake_RS06945 PF02441 Flavoprotein sake_RS06945 PF04127 DNA / pantothenate metabolism flavoprotein sake_RS06950 PF01192 RNA polymerase Rpb6 sake_RS06955 PF00625 Guanylate kinase sake_RS06960 PF00625 Guanylate kinase sake_RS06965 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family sake_RS06970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain sake_RS06970 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain sake_RS06970 PF02142 MGS-like domain sake_RS06975 PF00117 Glutamine amidotransferase class-I sake_RS06975 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain sake_RS06985 PF01979 Amidohydrolase family sake_RS06990 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain sake_RS06990 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain sake_RS06995 PF00156 Phosphoribosyl transferase domain sake_RS07000 PF01029 NusB family sake_RS07005 PF01132 Elongation factor P (EF-P) OB domain sake_RS07005 PF08207 Elongation factor P (EF-P) KOW-like domain sake_RS07005 PF09285 Elongation factor P, C-terminal sake_RS07010 PF01761 3-dehydroquinate synthase sake_RS07020 PF01264 Chorismate synthase sake_RS07025 PF01488 Shikimate / quinate 5-dehydrogenase sake_RS07025 PF08501 Shikimate dehydrogenase substrate binding domain sake_RS07025 PF18317 Shikimate 5'-dehydrogenase C-terminal domain sake_RS07035 PF03652 Holliday junction resolvase sake_RS07040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain sake_RS07040 PF01411 tRNA synthetases class II (A) sake_RS07040 PF02272 DHHA1 domain sake_RS07055 PF01479 S4 domain sake_RS07055 PF00163 Ribosomal protein S4/S9 N-terminal domain sake_RS07065 PF12002 MgsA AAA+ ATPase C terminal sake_RS07065 PF00004 ATPase family associated with various cellular activities (AAA) sake_RS07065 PF16193 AAA C-terminal domain sake_RS07070 PF02580 D-Tyr-tRNA(Tyr) deacylase sake_RS07080 PF00724 NADH:flavin oxidoreductase / NADH oxidase family sake_RS07080 PF07992 Pyridine nucleotide-disulphide oxidoreductase sake_RS07090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain sake_RS07090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain sake_RS07090 PF02770 Acyl-CoA dehydrogenase, middle domain sake_RS07095 PF00501 AMP-binding enzyme sake_RS07095 PF13193 AMP-binding enzyme C-terminal domain sake_RS07100 PF07690 Major Facilitator Superfamily sake_RS07115 PF00474 Sodium:solute symporter family sake_RS07125 PF00155 Aminotransferase class I and II sake_RS07125 PF00392 Bacterial regulatory proteins, gntR family sake_RS07165 PF00202 Aminotransferase class-III sake_RS07175 PF01494 FAD binding domain sake_RS07185 PF07859 alpha/beta hydrolase fold sake_RS07190 PF00083 Sugar (and other) transporter sake_RS07195 PF00083 Sugar (and other) transporter sake_RS07205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family sake_RS07205 PF03466 LysR substrate binding domain sake_RS07210 PF00042 Globin sake_RS07210 PF00970 Oxidoreductase FAD-binding domain sake_RS07210 PF00175 Oxidoreductase NAD-binding domain sake_RS07215 PF02082 Transcriptional regulator sake_RS07225 PF13520 Amino acid permease sake_RS07235 PF00456 Transketolase, thiamine diphosphate binding domain sake_RS07245 PF01842 ACT domain sake_RS07245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain sake_RS07245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain sake_RS07250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain sake_RS07250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain sake_RS07250 PF00205 Thiamine pyrophosphate enzyme, central domain sake_RS07255 PF07969 Amidohydrolase family sake_RS07260 PF00083 Sugar (and other) transporter sake_RS07260 PF07690 Major Facilitator Superfamily sake_RS07270 PF00171 Aldehyde dehydrogenase family sake_RS07275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain sake_RS07275 PF02770 Acyl-CoA dehydrogenase, middle domain sake_RS07275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain sake_RS07280 PF00378 Enoyl-CoA hydratase/isomerase sake_RS07285 PF02515 CoA-transferase family III sake_RS07290 PF03466 LysR substrate binding domain sake_RS07290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family sake_RS07300 PF08240 Alcohol dehydrogenase GroES-like domain sake_RS07300 PF00107 Zinc-binding dehydrogenase sake_RS07310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family sake_RS07310 PF03466 LysR substrate binding domain sake_RS07315 PF07690 Major Facilitator Superfamily sake_RS07315 PF00083 Sugar (and other) transporter sake_RS07320 PF00890 FAD binding domain sake_RS07325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold sake_RS07325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain sake_RS07340 PF00291 Pyridoxal-phosphate dependent enzyme sake_RS07345 PF00330 Aconitase family (aconitate hydratase) sake_RS07350 PF00884 Sulfatase sake_RS07360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain sake_RS07360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold sake_RS07385 PF00083 Sugar (and other) transporter sake_RS07390 PF00392 Bacterial regulatory proteins, gntR family sake_RS07390 PF07729 FCD domain sake_RS07395 PF00795 Carbon-nitrogen hydrolase sake_RS07400 PF00860 Permease family sake_RS07405 PF01979 Amidohydrolase family sake_RS07410 PF00860 Permease family sake_RS07415 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase sake_RS07415 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain sake_RS07415 PF00111 2Fe-2S iron-sulfur cluster binding domain sake_RS07415 PF01799 [2Fe-2S] binding domain sake_RS07420 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain sake_RS07420 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase sake_RS07450 PF00576 HIUase/Transthyretin family sake_RS07455 PF01014 Uricase sake_RS07460 PF00860 Permease family sake_RS07465 PF09339 IclR helix-turn-helix domain sake_RS07465 PF01614 Bacterial transcriptional regulator sake_RS07470 PF03949 Malic enzyme, NAD binding domain sake_RS07470 PF00390 Malic enzyme, N-terminal domain sake_RS07485 PF05899 Protein of unknown function (DUF861) sake_RS07485 PF07883 Cupin domain sake_RS07490 PF01261 Xylose isomerase-like TIM barrel sake_RS07495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase sake_RS07495 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase sake_RS07500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain sake_RS07500 PF00205 Thiamine pyrophosphate enzyme, central domain sake_RS07500 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain sake_RS07505 PF02595 Glycerate kinase family sake_RS07510 PF01979 Amidohydrolase family sake_RS07515 PF00578 AhpC/TSA family sake_RS07525 PF00857 Isochorismatase family sake_RS07545 PF00005 ABC transporter sake_RS07550 PF01336 OB-fold nucleic acid binding domain sake_RS07550 PF00152 tRNA synthetases class II (D, K and N) sake_RS07550 PF02938 GAD domain sake_RS07555 PF13393 Histidyl-tRNA synthetase sake_RS07555 PF03129 Anticodon binding domain sake_RS07560 PF03993 Domain of Unknown Function (DUF349) sake_RS07570 PF13291 ACT domain sake_RS07570 PF02824 TGS domain sake_RS07570 PF04607 Region found in RelA / SpoT proteins sake_RS07575 PF02355 Protein export membrane protein sake_RS07575 PF07549 SecD/SecF GG Motif sake_RS07580 PF02355 Protein export membrane protein sake_RS07580 PF07549 SecD/SecF GG Motif sake_RS07590 PF05496 Holliday junction DNA helicase RuvB P-loop domain sake_RS07590 PF17864 RuvB AAA lid domain sake_RS07590 PF05491 RuvB C-terminal winged helix domain sake_RS07595 PF07499 RuvA, C-terminal domain sake_RS07595 PF01330 RuvA N terminal domain sake_RS07600 PF02075 Crossover junction endodeoxyribonuclease RuvC sake_RS07605 PF01709 Transcriptional regulator sake_RS07610 PF07685 CobB/CobQ-like glutamine amidotransferase domain sake_RS07615 PF08245 Mur ligase middle domain sake_RS07615 PF08353 Domain of unknown function (DUF1727) sake_RS07625 PF03641 Possible lysine decarboxylase sake_RS07630 PF01230 HIT domain sake_RS07645 PF00155 Aminotransferase class I and II sake_RS07650 PF00202 Aminotransferase class-III sake_RS07660 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain sake_RS07660 PF03129 Anticodon binding domain sake_RS07660 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) sake_RS07670 PF00578 AhpC/TSA family sake_RS07670 PF17991 Thioredoxin like C-terminal domain sake_RS07670 PF02683 Cytochrome C biogenesis protein transmembrane region sake_RS07675 PF05726 Pirin C-terminal cupin domain sake_RS07675 PF02678 Pirin sake_RS07685 PF02811 PHP domain sake_RS07685 PF17657 Bacterial DNA polymerase III alpha subunit finger domain sake_RS07685 PF07733 Bacterial DNA polymerase III alpha NTPase domain sake_RS07685 PF14579 Helix-hairpin-helix motif sake_RS07690 PF13193 AMP-binding enzyme C-terminal domain sake_RS07690 PF00501 AMP-binding enzyme sake_RS07695 PF08946 Osmosensory transporter coiled coil sake_RS07695 PF00083 Sugar (and other) transporter sake_RS07700 PF00378 Enoyl-CoA hydratase/isomerase sake_RS07705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family sake_RS07705 PF03466 LysR substrate binding domain sake_RS07720 PF04309 Glycerol-3-phosphate responsive antiterminator sake_RS07725 PF07690 Major Facilitator Superfamily sake_RS07735 PF02913 FAD linked oxidases, C-terminal domain sake_RS07735 PF01565 FAD binding domain sake_RS07740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain sake_RS07740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain sake_RS07745 PF07702 UTRA domain sake_RS07745 PF00392 Bacterial regulatory proteins, gntR family sake_RS07760 PF03611 PTS system sugar-specific permease component sake_RS07765 PF01557 Fumarylacetoacetate (FAA) hydrolase family sake_RS07775 PF00474 Sodium:solute symporter family sake_RS07790 PF03741 Integral membrane protein TerC family sake_RS07810 PF00501 AMP-binding enzyme sake_RS07810 PF13193 AMP-binding enzyme C-terminal domain sake_RS07815 PF00083 Sugar (and other) transporter sake_RS07825 PF01638 HxlR-like helix-turn-helix sake_RS07835 PF17757 UvrB interaction domain sake_RS07835 PF02151 UvrB/uvrC motif sake_RS07835 PF04851 Type III restriction enzyme, res subunit sake_RS07835 PF00271 Helicase conserved C-terminal domain sake_RS07835 PF12344 Ultra-violet resistance protein B sake_RS07845 PF01370 NAD dependent epimerase/dehydratase family sake_RS07850 PF00392 Bacterial regulatory proteins, gntR family sake_RS07850 PF07729 FCD domain sake_RS07855 PF02447 GntP family permease sake_RS07865 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase sake_RS07865 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase sake_RS07870 PF01121 Dephospho-CoA kinase sake_RS07875 PF01205 Uncharacterized protein family UPF0029 sake_RS07875 PF09186 Domain of unknown function (DUF1949) sake_RS07880 PF00575 S1 RNA binding domain sake_RS07885 PF17668 Acetyltransferase (GNAT) domain sake_RS07885 PF13530 Sterol carrier protein domain sake_RS07890 PF00476 DNA polymerase family A sake_RS07890 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain sake_RS07890 PF01367 5'-3' exonuclease, C-terminal SAM fold sake_RS07895 PF03061 Thioesterase superfamily sake_RS07900 PF00072 Response regulator receiver domain sake_RS07900 PF03861 ANTAR domain sake_RS07950 PF02887 Pyruvate kinase, alpha/beta domain sake_RS07950 PF00224 Pyruvate kinase, barrel domain sake_RS07960 PF07992 Pyridine nucleotide-disulphide oxidoreductase sake_RS07960 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster sake_RS07965 PF00310 Glutamine amidotransferases class-II sake_RS07965 PF04898 Glutamate synthase central domain sake_RS07965 PF01645 Conserved region in glutamate synthase sake_RS07965 PF01493 GXGXG motif sake_RS07975 PF01790 Prolipoprotein diacylglyceryl transferase sake_RS07980 PF00290 Tryptophan synthase alpha chain sake_RS07985 PF00291 Pyridoxal-phosphate dependent enzyme sake_RS07990 PF00218 Indole-3-glycerol phosphate synthase sake_RS08005 PF04715 Anthranilate synthase component I, N terminal region sake_RS08005 PF00425 chorismate binding enzyme sake_RS08010 PF01502 Phosphoribosyl-AMP cyclohydrolase sake_RS08020 PF00977 Histidine biosynthesis protein sake_RS08025 PF08029 HisG, C-terminal domain sake_RS08025 PF01634 ATP phosphoribosyltransferase sake_RS08030 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase sake_RS08035 PF00885 6,7-dimethyl-8-ribityllumazine synthase sake_RS08040 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase sake_RS08040 PF00925 GTP cyclohydrolase II sake_RS08045 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase sake_RS08045 PF00925 GTP cyclohydrolase II sake_RS08050 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region sake_RS08050 PF01872 RibD C-terminal domain sake_RS08060 PF00834 Ribulose-phosphate 3 epimerase family sake_RS08075 PF01029 NusB family sake_RS08075 PF01189 16S rRNA methyltransferase RsmB/F sake_RS08080 PF00551 Formyl transferase sake_RS08080 PF02911 Formyl transferase, C-terminal domain sake_RS08085 PF01327 Polypeptide deformylase sake_RS08125 PF04073 Aminoacyl-tRNA editing domain sake_RS08140 PF01641 SelR domain sake_RS08150 PF00570 HRDC domain sake_RS08150 PF01612 3'-5' exonuclease sake_RS08155 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain sake_RS08155 PF00378 Enoyl-CoA hydratase/isomerase sake_RS08155 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain sake_RS08160 PF00355 Rieske [2Fe-2S] domain sake_RS08165 PF00694 Aconitase C-terminal domain sake_RS08165 PF00330 Aconitase family (aconitate hydratase) sake_RS08170 PF01938 TRAM domain sake_RS08170 PF05958 tRNA (Uracil-5-)-methyltransferase sake_RS08175 PF13520 Amino acid permease sake_RS08180 PF02254 TrkA-N domain sake_RS08180 PF02080 TrkA-C domain sake_RS08185 PF02080 TrkA-C domain sake_RS08185 PF02254 TrkA-N domain sake_RS08205 PF00692 dUTPase sake_RS08245 PF03989 DNA gyrase C-terminal domain, beta-propeller sake_RS08245 PF00521 DNA gyrase/topoisomerase IV, subunit A sake_RS08265 PF00005 ABC transporter sake_RS08265 PF00664 ABC transporter transmembrane region sake_RS08270 PF02322 Cytochrome bd terminal oxidase subunit II sake_RS08275 PF01654 Cytochrome bd terminal oxidase subunit I sake_RS08280 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain sake_RS08280 PF00056 lactate/malate dehydrogenase, NAD binding domain sake_RS08285 PF00986 DNA gyrase B subunit, carboxyl terminus sake_RS08285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sake_RS08285 PF01751 Toprim domain sake_RS08285 PF00204 DNA gyrase B sake_RS08295 PF04539 Sigma-70 region 3 sake_RS08295 PF04542 Sigma-70 region 2 sake_RS08295 PF00140 Sigma-70 factor, region 1.2 sake_RS08295 PF04545 Sigma-70, region 4 sake_RS08310 PF00883 Cytosol aminopeptidase family, catalytic domain sake_RS08310 PF02789 Cytosol aminopeptidase family, N-terminal domain sake_RS08315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain sake_RS08315 PF07992 Pyridine nucleotide-disulphide oxidoreductase sake_RS08320 PF02817 e3 binding domain sake_RS08320 PF00364 Biotin-requiring enzyme sake_RS08320 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) sake_RS08335 PF03099 Biotin/lipoate A/B protein ligase family sake_RS08340 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family sake_RS08340 PF04055 Radical SAM superfamily sake_RS08355 PF00120 Glutamine synthetase, catalytic domain sake_RS08355 PF03951 Glutamine synthetase, beta-Grasp domain sake_RS08365 PF03710 Glutamate-ammonia ligase adenylyltransferase sake_RS08365 PF08335 GlnD PII-uridylyltransferase sake_RS08370 PF00120 Glutamine synthetase, catalytic domain sake_RS08370 PF03951 Glutamine synthetase, beta-Grasp domain sake_RS08375 PF02548 Ketopantoate hydroxymethyltransferase sake_RS08385 PF00557 Metallopeptidase family M24 sake_RS08390 PF00480 ROK family sake_RS08395 PF03477 ATP cone domain sake_RS08400 PF00815 Histidinol dehydrogenase sake_RS08405 PF17657 Bacterial DNA polymerase III alpha subunit finger domain sake_RS08405 PF07733 Bacterial DNA polymerase III alpha NTPase domain sake_RS08405 PF14579 Helix-hairpin-helix motif sake_RS08405 PF02811 PHP domain sake_RS08410 PF00849 RNA pseudouridylate synthase sake_RS08415 PF01252 Signal peptidase (SPase) II sake_RS08420 PF05103 DivIVA protein sake_RS08430 PF04472 Cell division protein SepF sake_RS08435 PF01168 Alanine racemase, N-terminal domain sake_RS08445 PF12327 FtsZ family, C-terminal domain sake_RS08445 PF00091 Tubulin/FtsZ family, GTPase domain sake_RS08450 PF08478 POTRA domain, FtsQ-type sake_RS08455 PF01225 Mur ligase family, catalytic domain sake_RS08455 PF08245 Mur ligase middle domain sake_RS08455 PF02875 Mur ligase family, glutamate ligase domain sake_RS08460 PF03033 Glycosyltransferase family 28 N-terminal domain sake_RS08460 PF04101 Glycosyltransferase family 28 C-terminal domain sake_RS08465 PF01098 Cell cycle protein sake_RS08470 PF08245 Mur ligase middle domain sake_RS08470 PF02875 Mur ligase family, glutamate ligase domain sake_RS08475 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 sake_RS08475 PF00953 Glycosyl transferase family 4 sake_RS08480 PF08245 Mur ligase middle domain sake_RS08480 PF01225 Mur ligase family, catalytic domain sake_RS08480 PF02875 Mur ligase family, glutamate ligase domain sake_RS08485 PF08245 Mur ligase middle domain sake_RS08485 PF02875 Mur ligase family, glutamate ligase domain sake_RS08485 PF01225 Mur ligase family, catalytic domain sake_RS08490 PF03717 Penicillin-binding Protein dimerisation domain sake_RS08490 PF00905 Penicillin binding protein transpeptidase domain sake_RS08500 PF01795 MraW methylase family sake_RS08505 PF02381 MraZ protein, putative antitoxin-like sake_RS08515 PF00817 impB/mucB/samB family sake_RS08515 PF11799 impB/mucB/samB family C-terminal domain sake_RS08520 PF00348 Polyprenyl synthetase sake_RS08530 PF00069 Protein kinase domain sake_RS08535 PF01474 Class-II DAHP synthetase family sake_RS08540 PF01553 Acyltransferase sake_RS08545 PF12146 Serine aminopeptidase, S33 sake_RS08550 PF00501 AMP-binding enzyme sake_RS08555 PF07992 Pyridine nucleotide-disulphide oxidoreductase sake_RS08555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain sake_RS08560 PF02785 Biotin carboxylase C-terminal domain sake_RS08560 PF00289 Biotin carboxylase, N-terminal domain sake_RS08560 PF02436 Conserved carboxylase domain sake_RS08560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain sake_RS08560 PF00682 HMGL-like sake_RS08560 PF00364 Biotin-requiring enzyme sake_RS08565 PF13614 AAA domain sake_RS08570 PF13411 MerR HTH family regulatory protein sake_RS08575 PF00376 MerR family regulatory protein sake_RS08580 PF00498 FHA domain sake_RS08585 PF01597 Glycine cleavage H-protein sake_RS08590 PF00171 Aldehyde dehydrogenase family sake_RS08600 PF04198 Putative sugar-binding domain sake_RS08605 PF16901 C-terminal domain of alpha-glycerophosphate oxidase sake_RS08605 PF01266 FAD dependent oxidoreductase sake_RS08610 PF00230 Major intrinsic protein sake_RS08615 PF00370 FGGY family of carbohydrate kinases, N-terminal domain sake_RS08615 PF02782 FGGY family of carbohydrate kinases, C-terminal domain sake_RS08620 PF13532 2OG-Fe(II) oxygenase superfamily sake_RS08625 PF03352 Methyladenine glycosylase sake_RS08635 PF13419 Haloacid dehalogenase-like hydrolase sake_RS08640 PF07690 Major Facilitator Superfamily sake_RS08645 PF01047 MarR family sake_RS08655 PF02567 Phenazine biosynthesis-like protein sake_RS08660 PF16884 N-terminal domain of oxidoreductase sake_RS08660 PF00107 Zinc-binding dehydrogenase sake_RS08675 PF07992 Pyridine nucleotide-disulphide oxidoreductase sake_RS08690 PF00083 Sugar (and other) transporter sake_RS08690 PF08946 Osmosensory transporter coiled coil sake_RS08700 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain sake_RS08700 PF02805 Metal binding domain of Ada sake_RS08700 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain sake_RS08700 PF12833 Helix-turn-helix domain sake_RS08710 PF00570 HRDC domain sake_RS08710 PF16124 RecQ zinc-binding sake_RS08710 PF09382 RQC domain sake_RS08710 PF00270 DEAD/DEAH box helicase sake_RS08710 PF00271 Helicase conserved C-terminal domain sake_RS08720 PF00296 Luciferase-like monooxygenase sake_RS08745 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal sake_RS08745 PF01926 50S ribosome-binding GTPase sake_RS08750 PF02224 Cytidylate kinase sake_RS08755 PF02153 Prephenate dehydrogenase sake_RS08760 PF00849 RNA pseudouridylate synthase sake_RS08760 PF01479 S4 domain sake_RS08765 PF04079 Segregation and condensation complex subunit ScpB sake_RS08770 PF02616 Segregation and condensation protein ScpA sake_RS08775 PF13614 AAA domain sake_RS08780 PF00375 Sodium:dicarboxylate symporter family sake_RS08785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sake_RS08785 PF00512 His Kinase A (phospho-acceptor) domain sake_RS08790 PF12431 Transcriptional regulator sake_RS08790 PF00072 Response regulator receiver domain sake_RS08795 PF16177 Acetyl-coenzyme A synthetase N-terminus sake_RS08795 PF00501 AMP-binding enzyme sake_RS08795 PF13193 AMP-binding enzyme C-terminal domain sake_RS08805 PF03972 MmgE/PrpD family sake_RS08815 PF00285 Citrate synthase, C-terminal domain sake_RS08820 PF04261 Dyp-type peroxidase family sake_RS08825 PF04454 Encapsulating protein for peroxidase sake_RS08830 PF02899 Phage integrase, N-terminal SAM-like domain sake_RS08830 PF00589 Phage integrase family sake_RS08835 PF00293 NUDIX domain sake_RS08850 PF00005 ABC transporter sake_RS08850 PF02687 FtsX-like permease family sake_RS08850 PF12704 MacB-like periplasmic core domain sake_RS08870 PF06418 CTP synthase N-terminus sake_RS08870 PF00117 Glutamine amidotransferase class-I sake_RS08875 PF02463 RecF/RecN/SMC N terminal domain sake_RS08880 PF01513 ATP-NAD kinase sake_RS08885 PF01479 S4 domain sake_RS08885 PF01728 FtsJ-like methyltransferase sake_RS08895 PF18407 GCN5-related N-acetyltransferase like domain sake_RS08895 PF13344 Haloacid dehalogenase-like hydrolase sake_RS08905 PF02770 Acyl-CoA dehydrogenase, middle domain sake_RS08905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain sake_RS08905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain sake_RS08910 PF02515 CoA-transferase family III sake_RS08930 PF00579 tRNA synthetases class I (W and Y) sake_RS08940 PF00156 Phosphoribosyl transferase domain sake_RS08945 PF00206 Lyase sake_RS08945 PF14698 Argininosuccinate lyase C-terminal sake_RS08950 PF00764 Arginosuccinate synthase sake_RS08955 PF12796 Ankyrin repeats (3 copies) sake_RS08955 PF00023 Ankyrin repeat sake_RS08960 PF02863 Arginine repressor, C-terminal domain sake_RS08960 PF01316 Arginine repressor, DNA binding domain sake_RS08965 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain sake_RS08965 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain sake_RS08970 PF00202 Aminotransferase class-III sake_RS08975 PF00696 Amino acid kinase family sake_RS08980 PF01960 ArgJ family sake_RS08985 PF02774 Semialdehyde dehydrogenase, dimerisation domain sake_RS08985 PF01118 Semialdehyde dehydrogenase, NAD binding domain sake_RS08990 PF08240 Alcohol dehydrogenase GroES-like domain sake_RS08990 PF00107 Zinc-binding dehydrogenase sake_RS09000 PF03483 B3/4 domain sake_RS09000 PF03484 tRNA synthetase B5 domain sake_RS09000 PF03147 Ferredoxin-fold anticodon binding domain sake_RS09000 PF01588 Putative tRNA binding domain sake_RS09000 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain sake_RS09005 PF01409 tRNA synthetases class II core domain (F) sake_RS09005 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain sake_RS09020 PF00588 SpoU rRNA Methylase family sake_RS09025 PF00453 Ribosomal protein L20 sake_RS09030 PF01632 Ribosomal protein L35 sake_RS09035 PF00707 Translation initiation factor IF-3, C-terminal domain sake_RS09035 PF05198 Translation initiation factor IF-3, N-terminal domain sake_RS09050 PF00977 Histidine biosynthesis protein sake_RS09060 PF00117 Glutamine amidotransferase class-I sake_RS09065 PF00475 Imidazoleglycerol-phosphate dehydratase sake_RS09070 PF00155 Aminotransferase class I and II sake_RS09080 PF01726 LexA DNA binding domain sake_RS09080 PF00717 Peptidase S24-like sake_RS09085 PF13307 Helicase C-terminal domain sake_RS09090 PF01926 50S ribosome-binding GTPase sake_RS09090 PF16360 GTP-binding GTPase Middle Region sake_RS09090 PF13167 GTP-binding GTPase N-terminal sake_RS09095 PF05175 Methyltransferase small domain sake_RS09100 PF01678 Diaminopimelate epimerase sake_RS09110 PF00919 Uncharacterized protein family UPF0004 sake_RS09110 PF04055 Radical SAM superfamily sake_RS09120 PF02631 RecX family sake_RS09125 PF00154 recA bacterial DNA recombination protein sake_RS09140 PF00994 Probable molybdopterin binding domain sake_RS09140 PF18146 Damage-inducible protein CinA KH domain sake_RS09140 PF02464 Competence-damaged protein sake_RS09145 PF01066 CDP-alcohol phosphatidyltransferase sake_RS09150 PF17854 FtsK alpha domain sake_RS09150 PF09397 Ftsk gamma domain sake_RS09150 PF01580 FtsK/SpoIIIE family sake_RS09155 PF12706 Beta-lactamase superfamily domain sake_RS09155 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain sake_RS09155 PF17770 Ribonuclease J C-terminal domain sake_RS09160 PF00701 Dihydrodipicolinate synthetase family sake_RS09170 PF05173 Dihydrodipicolinate reductase, C-terminus sake_RS09170 PF01113 Dihydrodipicolinate reductase, N-terminus sake_RS09175 PF01757 Acyltransferase family sake_RS09195 PF00975 Thioesterase domain sake_RS09195 PF00668 Condensation domain sake_RS09195 PF00975 Thioesterase domain sake_RS09195 PF00501 AMP-binding enzyme sake_RS09195 PF00550 Phosphopantetheine attachment site sake_RS09195 PF00550 Phosphopantetheine attachment site sake_RS09195 PF00668 Condensation domain sake_RS09195 PF13193 AMP-binding enzyme C-terminal domain sake_RS09195 PF00501 AMP-binding enzyme sake_RS09195 PF13193 AMP-binding enzyme C-terminal domain sake_RS09205 PF13193 AMP-binding enzyme C-terminal domain sake_RS09205 PF00501 AMP-binding enzyme sake_RS09210 PF00005 ABC transporter sake_RS09215 PF01032 FecCD transport family sake_RS09220 PF01497 Periplasmic binding protein sake_RS09225 PF00664 ABC transporter transmembrane region sake_RS09225 PF00005 ABC transporter sake_RS09230 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase sake_RS09240 PF00550 Phosphopantetheine attachment site sake_RS09240 PF00857 Isochorismatase family sake_RS09250 PF00425 chorismate binding enzyme sake_RS09260 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain sake_RS09260 PF00877 NlpC/P60 family sake_RS09265 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain sake_RS09265 PF13378 Enolase C-terminal domain-like sake_RS09280 PF00675 Insulinase (Peptidase family M16) sake_RS09280 PF05193 Peptidase M16 inactive domain sake_RS09285 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain sake_RS09285 PF00575 S1 RNA binding domain sake_RS09285 PF00013 KH domain sake_RS09285 PF01138 3' exoribonuclease family, domain 1 sake_RS09290 PF00312 Ribosomal protein S15 sake_RS09295 PF02245 Methylpurine-DNA glycosylase (MPG) sake_RS09300 PF00155 Aminotransferase class I and II sake_RS09305 PF13649 Methyltransferase domain sake_RS09315 PF01555 DNA methylase sake_RS09315 PF18273 Type III R-M EcoP15I C-terminal domain sake_RS09325 PF02664 S-Ribosylhomocysteinase (LuxS) sake_RS09330 PF01048 Phosphorylase superfamily sake_RS09335 PF00248 Aldo/keto reductase family sake_RS09340 PF06574 FAD synthetase sake_RS09340 PF01687 Riboflavin kinase sake_RS09360 PF01509 TruB family pseudouridylate synthase (N terminal domain) sake_RS09360 PF16198 tRNA pseudouridylate synthase B C-terminal domain sake_RS09360 PF09142 tRNA Pseudouridine synthase II, C terminal sake_RS09365 PF02033 Ribosome-binding factor A sake_RS09370 PF11987 Translation-initiation factor 2 sake_RS09370 PF04760 Translation initiation factor IF-2, N-terminal region sake_RS09370 PF00009 Elongation factor Tu GTP binding domain sake_RS09380 PF13184 NusA-like KH domain sake_RS09380 PF08529 NusA N-terminal domain sake_RS09385 PF17384 RimP C-terminal SH3 domain sake_RS09385 PF02576 RimP N-terminal domain sake_RS09395 PF01925 Sulfite exporter TauE/SafE sake_RS09400 PF04073 Aminoacyl-tRNA editing domain sake_RS09400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) sake_RS09400 PF03129 Anticodon binding domain sake_RS09410 PF17820 PDZ domain sake_RS09410 PF02163 Peptidase family M50 sake_RS09415 PF00005 ABC transporter sake_RS09415 PF00664 ABC transporter transmembrane region sake_RS09430 PF01765 Ribosome recycling factor sake_RS09435 PF00696 Amino acid kinase family sake_RS09440 PF00889 Elongation factor TS sake_RS09445 PF00318 Ribosomal protein S2 sake_RS09450 PF01551 Peptidase family M23 sake_RS09515 PF01464 Transglycosylase SLT domain sake_RS09735 PF00589 Phage integrase family sake_RS09735 PF14659 Phage integrase, N-terminal SAM-like domain sake_RS09745 PF13439 Glycosyltransferase Family 4 sake_RS09745 PF00534 Glycosyl transferases group 1 sake_RS09760 PF10410 DnaB-helicase binding domain of primase sake_RS09760 PF01807 CHC2 zinc finger sake_RS09760 PF08278 DNA primase DnaG DnaB-binding sake_RS09760 PF13662 Toprim domain sake_RS09760 PF08275 DNA primase catalytic core, N-terminal domain sake_RS09765 PF13286 Phosphohydrolase-associated domain sake_RS09765 PF01966 HD domain sake_RS09770 PF01207 Dihydrouridine synthase (Dus) sake_RS09775 PF00202 Aminotransferase class-III sake_RS09795 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) sake_RS09795 PF03129 Anticodon binding domain sake_RS09805 PF00107 Zinc-binding dehydrogenase sake_RS09805 PF08240 Alcohol dehydrogenase GroES-like domain sake_RS09815 PF00561 alpha/beta hydrolase fold sake_RS09820 PF01053 Cys/Met metabolism PLP-dependent enzyme sake_RS09825 PF00324 Amino acid permease sake_RS09830 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain sake_RS09830 PF00326 Prolyl oligopeptidase family sake_RS09835 PF02637 GatB domain sake_RS09835 PF02934 GatB/GatE catalytic domain sake_RS09840 PF01425 Amidase sake_RS09845 PF02686 Glu-tRNAGln amidotransferase C subunit sake_RS09850 PF06737 Transglycosylase-like domain sake_RS09855 PF01653 NAD-dependent DNA ligase adenylation domain sake_RS09855 PF03120 NAD-dependent DNA ligase OB-fold domain sake_RS09855 PF00533 BRCA1 C Terminus (BRCT) domain sake_RS09855 PF03119 NAD-dependent DNA ligase C4 zinc finger domain sake_RS09855 PF12826 Helix-hairpin-helix motif sake_RS09865 PF16701 Adenylate cyclase regulatory domain sake_RS09865 PF00211 Adenylate and Guanylate cyclase catalytic domain sake_RS09875 PF08279 HTH domain sake_RS09875 PF03099 Biotin/lipoate A/B protein ligase family sake_RS09875 PF02237 Biotin protein ligase C terminal domain sake_RS09885 PF01039 Carboxyl transferase domain sake_RS09905 PF00171 Aldehyde dehydrogenase family sake_RS09910 PF02545 Maf-like protein sake_RS09915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain sake_RS09915 PF00364 Biotin-requiring enzyme sake_RS09915 PF02785 Biotin carboxylase C-terminal domain sake_RS09915 PF00289 Biotin carboxylase, N-terminal domain sake_RS09920 PF07690 Major Facilitator Superfamily sake_RS09920 PF00083 Sugar (and other) transporter sake_RS09925 PF07992 Pyridine nucleotide-disulphide oxidoreductase sake_RS09925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain sake_RS09930 PF01048 Phosphorylase superfamily sake_RS09935 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I sake_RS09935 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II sake_RS09935 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III sake_RS09935 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain sake_RS09940 PF01791 DeoC/LacD family aldolase sake_RS09950 PF00270 DEAD/DEAH box helicase sake_RS09950 PF02559 CarD-like/TRCF domain sake_RS09950 PF00271 Helicase conserved C-terminal domain sake_RS09950 PF17757 UvrB interaction domain sake_RS09950 PF03461 TRCF domain sake_RS09960 PF06965 Na+/H+ antiporter 1 sake_RS09965 PF01592 NifU-like N terminal domain sake_RS09970 PF00266 Aminotransferase class-V sake_RS09975 PF01195 Peptidyl-tRNA hydrolase sake_RS09980 PF01386 Ribosomal L25p family sake_RS09980 PF14693 Ribosomal protein TL5, C-terminal domain sake_RS09985 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase sake_RS09990 PF16363 GDP-mannose 4,6 dehydratase sake_RS10025 PF01757 Acyltransferase family sake_RS10035 PF00534 Glycosyl transferases group 1 sake_RS10035 PF13439 Glycosyltransferase Family 4 sake_RS10040 PF14572 Phosphoribosyl synthetase-associated domain sake_RS10040 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase sake_RS10045 PF00132 Bacterial transferase hexapeptide (six repeats) sake_RS10045 PF12804 MobA-like NTP transferase domain sake_RS10055 PF16326 ABC transporter C-terminal domain sake_RS10055 PF00005 ABC transporter sake_RS10055 PF12848 ABC transporter sake_RS10060 PF00975 Thioesterase domain sake_RS10060 PF00550 Phosphopantetheine attachment site sake_RS10060 PF00668 Condensation domain sake_RS10060 PF13193 AMP-binding enzyme C-terminal domain sake_RS10060 PF00501 AMP-binding enzyme sake_RS10060 PF00501 AMP-binding enzyme sake_RS10060 PF00975 Thioesterase domain sake_RS10060 PF13193 AMP-binding enzyme C-terminal domain sake_RS10060 PF00668 Condensation domain sake_RS10060 PF00550 Phosphopantetheine attachment site sake_RS10065 PF03621 MbtH-like protein sake_RS10070 PF13732 Domain of unknown function (DUF4162) sake_RS10070 PF00005 ABC transporter sake_RS10085 PF00083 Sugar (and other) transporter sake_RS10090 PF01614 Bacterial transcriptional regulator sake_RS10090 PF09339 IclR helix-turn-helix domain sake_RS10095 PF00221 Aromatic amino acid lyase sake_RS10100 PF02447 GntP family permease sake_RS10105 PF00890 FAD binding domain sake_RS10105 PF04205 FMN-binding domain sake_RS10105 PF03358 NADPH-dependent FMN reductase sake_RS10110 PF07729 FCD domain sake_RS10110 PF00392 Bacterial regulatory proteins, gntR family sake_RS10120 PF07992 Pyridine nucleotide-disulphide oxidoreductase sake_RS10120 PF14759 Reductase C-terminal sake_RS10125 PF14310 Fibronectin type III-like domain sake_RS10125 PF00933 Glycosyl hydrolase family 3 N terminal domain sake_RS10125 PF01915 Glycosyl hydrolase family 3 C-terminal domain sake_RS10130 PF00398 Ribosomal RNA adenine dimethylase sake_RS10135 PF01026 TatD related DNase sake_RS10140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases sake_RS10145 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase sake_RS10145 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase sake_RS10155 PF03734 L,D-transpeptidase catalytic domain sake_RS10155 PF17964 Bacterial Ig domain sake_RS10165 PF02467 Transcription factor WhiB sake_RS10180 PF02222 ATP-grasp domain sake_RS10180 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain sake_RS10185 PF00731 AIR carboxylase sake_RS10190 PF03816 Cell envelope-related transcriptional attenuator domain sake_RS10200 PF00664 ABC transporter transmembrane region sake_RS10200 PF00005 ABC transporter sake_RS10205 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded sake_RS10215 PF00484 Carbonic anhydrase sake_RS10220 PF00206 Lyase sake_RS10220 PF10415 Fumarase C C-terminus sake_RS10230 PF07690 Major Facilitator Superfamily sake_RS10235 PF00205 Thiamine pyrophosphate enzyme, central domain sake_RS10235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain sake_RS10235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain sake_RS10240 PF13344 Haloacid dehalogenase-like hydrolase sake_RS10240 PF00293 NUDIX domain sake_RS10250 PF01255 Putative undecaprenyl diphosphate synthase sake_RS10265 PF02585 GlcNAc-PI de-N-acetylase sake_RS10275 PF01272 Transcription elongation factor, GreA/GreB, C-term sake_RS10275 PF03449 Transcription elongation factor, N-terminal sake_RS10280 PF00291 Pyridoxal-phosphate dependent enzyme sake_RS10280 PF13291 ACT domain sake_RS10285 PF01594 AI-2E family transporter sake_RS10300 PF07992 Pyridine nucleotide-disulphide oxidoreductase sake_RS10305 PF00082 Subtilase family sake_RS10310 PF02541 Ppx/GppA phosphatase family sake_RS10325 PF03952 Enolase, N-terminal domain sake_RS10325 PF00113 Enolase, C-terminal TIM barrel domain sake_RS10330 PF03819 MazG nucleotide pyrophosphohydrolase domain sake_RS10335 PF00962 Adenosine/AMP deaminase sake_RS10345 PF02885 Glycosyl transferase family, helical bundle domain sake_RS10345 PF00591 Glycosyl transferase family, a/b domain sake_RS10345 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain sake_RS10350 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region sake_RS10370 PF02608 ABC transporter substrate-binding protein PnrA-like sake_RS10375 PF04107 Glutamate-cysteine ligase family 2(GCS2) sake_RS10375 PF01546 Peptidase family M20/M25/M40 sake_RS10380 PF13085 2Fe-2S iron-sulfur cluster binding domain sake_RS10385 PF00890 FAD binding domain sake_RS10385 PF02910 Fumarate reductase flavoprotein C-term sake_RS10395 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit sake_RS10400 PF00483 Nucleotidyl transferase sake_RS10400 PF01050 Mannose-6-phosphate isomerase sake_RS10410 PF00579 tRNA synthetases class I (W and Y) sake_RS10425 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain sake_RS10425 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain sake_RS10430 PF00464 Serine hydroxymethyltransferase sake_RS10435 PF03632 Glycosyl hydrolase family 65 central catalytic domain sake_RS10435 PF03636 Glycosyl hydrolase family 65, N-terminal domain sake_RS10435 PF03633 Glycosyl hydrolase family 65, C-terminal domain sake_RS10435 PF02358 Trehalose-phosphatase sake_RS10440 PF01758 Sodium Bile acid symporter family sake_RS10445 PF01202 Shikimate kinase sake_RS10450 PF13378 Enolase C-terminal domain-like sake_RS10450 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain sake_RS10460 PF02837 Glycosyl hydrolases family 2, sugar binding domain sake_RS10460 PF02836 Glycosyl hydrolases family 2, TIM barrel domain sake_RS10460 PF00703 Glycosyl hydrolases family 2 sake_RS10465 PF08125 Mannitol dehydrogenase C-terminal domain sake_RS10465 PF01232 Mannitol dehydrogenase Rossmann domain sake_RS10470 PF02614 Glucuronate isomerase sake_RS10475 PF00356 Bacterial regulatory proteins, lacI family sake_RS10480 PF01808 AICARFT/IMPCHase bienzyme sake_RS10480 PF02142 MGS-like domain sake_RS10485 PF00551 Formyl transferase sake_RS10495 PF00440 Bacterial regulatory proteins, tetR family sake_RS10500 PF00248 Aldo/keto reductase family sake_RS10515 PF00534 Glycosyl transferases group 1 sake_RS10515 PF13439 Glycosyltransferase Family 4 sake_RS10520 PF01850 PIN domain sake_RS10530 PF00271 Helicase conserved C-terminal domain sake_RS10530 PF00176 SNF2 family N-terminal domain sake_RS10530 PF12419 SNF2 Helicase protein sake_RS10535 PF02028 BCCT, betaine/carnitine/choline family transporter sake_RS10540 PF00171 Aldehyde dehydrogenase family sake_RS10545 PF00732 GMC oxidoreductase sake_RS10545 PF05199 GMC oxidoreductase sake_RS10555 PF00248 Aldo/keto reductase family sake_RS10565 PF07690 Major Facilitator Superfamily sake_RS10575 PF02696 Uncharacterized ACR, YdiU/UPF0061 family sake_RS10580 PF00549 CoA-ligase sake_RS10580 PF02629 CoA binding domain sake_RS10585 PF08442 ATP-grasp domain sake_RS10585 PF00549 CoA-ligase sake_RS10590 PF08946 Osmosensory transporter coiled coil sake_RS10590 PF00083 Sugar (and other) transporter sake_RS10595 PF00580 UvrD/REP helicase N-terminal domain sake_RS10595 PF13361 UvrD-like helicase C-terminal domain sake_RS10605 PF07690 Major Facilitator Superfamily sake_RS10635 PF01476 LysM domain sake_RS10635 PF00877 NlpC/P60 family sake_RS10635 PF08239 Bacterial SH3 domain sake_RS10640 PF00265 Thymidine kinase sake_RS10645 PF01325 Iron dependent repressor, N-terminal DNA binding domain sake_RS10645 PF02742 Iron dependent repressor, metal binding and dimerisation domain sake_RS10645 PF18357 Diphteria toxin repressor SH3 domain sake_RS10650 PF00266 Aminotransferase class-V sake_RS10655 PF05977 Transmembrane secretion effector sake_RS10660 PF11228 Protein of unknown function (DUF3027) sake_RS10665 PF00313 'Cold-shock' DNA-binding domain sake_RS10675 PF00486 Transcriptional regulatory protein, C terminal sake_RS10675 PF00072 Response regulator receiver domain sake_RS10680 PF00512 His Kinase A (phospho-acceptor) domain sake_RS10680 PF00672 HAMP domain sake_RS10680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sake_RS10690 PF00075 RNase H sake_RS10695 PF00425 chorismate binding enzyme sake_RS10700 PF05958 tRNA (Uracil-5-)-methyltransferase sake_RS10710 PF00118 TCP-1/cpn60 chaperonin family sake_RS10725 PF03167 Uracil DNA glycosylase superfamily sake_RS10745 PF00391 PEP-utilising enzyme, mobile domain sake_RS10745 PF05524 PEP-utilising enzyme, N-terminal sake_RS10745 PF02896 PEP-utilising enzyme, TIM barrel domain sake_RS10750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit sake_RS10755 PF00294 pfkB family carbohydrate kinase sake_RS10760 PF00455 DeoR C terminal sensor domain sake_RS10760 PF08220 DeoR-like helix-turn-helix domain sake_RS10765 PF00300 Histidine phosphatase superfamily (branch 1) sake_RS10770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family sake_RS10770 PF03466 LysR substrate binding domain sake_RS10795 PF00982 Glycosyltransferase family 20 sake_RS10815 PF08032 RNA 2'-O ribose methyltransferase substrate binding sake_RS10815 PF00588 SpoU rRNA Methylase family sake_RS10820 PF09190 DALR domain sake_RS10820 PF01406 tRNA synthetases class I (C) catalytic domain sake_RS10825 PF02559 CarD-like/TRCF domain sake_RS10835 PF00486 Transcriptional regulatory protein, C terminal sake_RS10835 PF00072 Response regulator receiver domain sake_RS10840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sake_RS10840 PF00512 His Kinase A (phospho-acceptor) domain sake_RS10845 PF01895 PhoU domain sake_RS10850 PF00300 Histidine phosphatase superfamily (branch 1) sake_RS10860 PF01053 Cys/Met metabolism PLP-dependent enzyme sake_RS10865 PF02223 Thymidylate kinase sake_RS10870 PF12169 DNA polymerase III subunits gamma and tau domain III sake_RS10875 PF05167 Uncharacterised ACR (DUF711) sake_RS10885 PF01594 AI-2E family transporter sake_RS10890 PF01238 Phosphomannose isomerase type I sake_RS10895 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I sake_RS10895 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II sake_RS10895 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III sake_RS10895 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain sake_RS10900 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain sake_RS10900 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain sake_RS10910 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain sake_RS10910 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain sake_RS10910 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain sake_RS10915 PF09015 NgoMIV restriction enzyme sake_RS10920 PF00111 2Fe-2S iron-sulfur cluster binding domain sake_RS10930 PF00881 Nitroreductase family sake_RS10940 PF00270 DEAD/DEAH box helicase sake_RS10940 PF08494 DEAD/H associated sake_RS10940 PF00271 Helicase conserved C-terminal domain sake_RS10945 PF00501 AMP-binding enzyme sake_RS10945 PF13193 AMP-binding enzyme C-terminal domain sake_RS10950 PF13520 Amino acid permease sake_RS10955 PF00795 Carbon-nitrogen hydrolase sake_RS10960 PF00849 RNA pseudouridylate synthase sake_RS10960 PF01479 S4 domain sake_RS10975 PF00106 short chain dehydrogenase sake_RS10980 PF01702 Queuine tRNA-ribosyltransferase sake_RS11010 PF13396 Phospholipase_D-nuclease N-terminal sake_RS11010 PF13091 PLD-like domain sake_RS11025 PF00733 Asparagine synthase sake_RS11025 PF13537 Glutamine amidotransferase domain sake_RS11040 PF01769 Divalent cation transporter sake_RS11040 PF03448 MgtE intracellular N domain sake_RS11040 PF00571 CBS domain sake_RS11065 PF01047 MarR family sake_RS11070 PF02566 OsmC-like protein sake_RS11080 PF08363 Glucan-binding protein C sake_RS11080 PF18652 Adhesin P1 N-terminal domain sake_RS11080 PF00746 LPXTG cell wall anchor motif sake_RS11080 PF17998 Cell surface antigen I/II C2 terminal domain sake_RS11080 PF16364 Cell surface antigen C-terminus sake_RS11090 PF13520 Amino acid permease sake_RS11105 PF01566 Natural resistance-associated macrophage protein sake_RS11105 PF03358 NADPH-dependent FMN reductase sake_RS11125 PF00581 Rhodanese-like domain sake_RS11125 PF00899 ThiF family sake_RS11130 PF05690 Thiazole biosynthesis protein ThiG sake_RS11140 PF01266 FAD dependent oxidoreductase sake_RS11145 PF02581 Thiamine monophosphate synthase sake_RS11150 PF00171 Aldehyde dehydrogenase family sake_RS11165 PF08267 Cobalamin-independent synthase, N-terminal domain sake_RS11165 PF01717 Cobalamin-independent synthase, Catalytic domain sake_RS11180 PF01384 Phosphate transporter family sake_RS11185 PF00005 ABC transporter sake_RS11190 PF00528 Binding-protein-dependent transport system inner membrane component sake_RS11195 PF00528 Binding-protein-dependent transport system inner membrane component sake_RS11200 PF12849 PBP superfamily domain sake_RS11210 PF18073 Rubredoxin metal binding domain sake_RS11215 PF10635 DisA bacterial checkpoint controller linker region sake_RS11215 PF00633 Helix-hairpin-helix motif sake_RS11215 PF02457 DisA bacterial checkpoint controller nucleotide-binding sake_RS11225 PF00730 HhH-GPD superfamily base excision DNA repair protein sake_RS11225 PF00633 Helix-hairpin-helix motif sake_RS11230 PF00583 Acetyltransferase (GNAT) family sake_RS11235 PF17871 AAA lid domain sake_RS11235 PF02861 Clp amino terminal domain, pathogenicity island component sake_RS11235 PF07724 AAA domain (Cdc48 subfamily) sake_RS11235 PF10431 C-terminal, D2-small domain, of ClpB protein sake_RS11235 PF00004 ATPase family associated with various cellular activities (AAA) sake_RS11245 PF00152 tRNA synthetases class II (D, K and N) sake_RS11245 PF01336 OB-fold nucleic acid binding domain sake_RS11250 PF02569 Pantoate-beta-alanine ligase sake_RS11275 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) sake_RS11280 PF02152 Dihydroneopterin aldolase sake_RS11285 PF00809 Pterin binding enzyme sake_RS11290 PF01227 GTP cyclohydrolase I sake_RS11295 PF01434 Peptidase family M41 sake_RS11295 PF00004 ATPase family associated with various cellular activities (AAA) sake_RS11295 PF17862 AAA+ lid domain sake_RS11305 PF01171 PP-loop family sake_RS11305 PF09179 TilS substrate binding domain sake_RS11315 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family sake_RS11320 PF00719 Inorganic pyrophosphatase sake_RS11325 PF07729 FCD domain sake_RS11325 PF00392 Bacterial regulatory proteins, gntR family sake_RS11330 PF13520 Amino acid permease sake_RS11335 PF00120 Glutamine synthetase, catalytic domain sake_RS11335 PF03951 Glutamine synthetase, beta-Grasp domain sake_RS11340 PF07722 Peptidase C26 sake_RS11345 PF00171 Aldehyde dehydrogenase family sake_RS11355 PF07687 Peptidase dimerisation domain sake_RS11355 PF01546 Peptidase family M20/M25/M40 sake_RS11360 PF01661 Macro domain sake_RS11375 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin sake_RS11380 PF01613 Flavin reductase like domain sake_RS11385 PF01979 Amidohydrolase family sake_RS11385 PF13382 Adenine deaminase C-terminal domain sake_RS11390 PF02378 Phosphotransferase system, EIIC sake_RS11390 PF00367 phosphotransferase system, EIIB sake_RS11395 PF01380 SIS domain sake_RS11400 PF01418 Helix-turn-helix domain, rpiR family sake_RS11400 PF01380 SIS domain sake_RS11405 PF07972 NrdI Flavodoxin like sake_RS11410 PF00317 Ribonucleotide reductase, all-alpha domain sake_RS11410 PF02867 Ribonucleotide reductase, barrel domain sake_RS11410 PF08343 Ribonucleotide reductase N-terminal sake_RS11415 PF00268 Ribonucleotide reductase, small chain sake_RS11420 PF02378 Phosphotransferase system, EIIC sake_RS11425 PF00367 phosphotransferase system, EIIB sake_RS11430 PF00392 Bacterial regulatory proteins, gntR family sake_RS11430 PF07702 UTRA domain sake_RS11445 PF01979 Amidohydrolase family sake_RS11450 PF00392 Bacterial regulatory proteins, gntR family sake_RS11455 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase sake_RS11460 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase sake_RS11465 PF00480 ROK family sake_RS11470 PF00701 Dihydrodipicolinate synthetase family sake_RS11475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region sake_RS11475 PF00005 ABC transporter sake_RS11480 PF00005 ABC transporter sake_RS11480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region sake_RS11485 PF00528 Binding-protein-dependent transport system inner membrane component sake_RS11490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle sake_RS11495 PF00392 Bacterial regulatory proteins, gntR family sake_RS11495 PF07702 UTRA domain sake_RS11505 PF00535 Glycosyl transferase family 2 sake_RS11510 PF04069 Substrate binding domain of ABC-type glycine betaine transport system sake_RS11515 PF00528 Binding-protein-dependent transport system inner membrane component sake_RS11520 PF00005 ABC transporter sake_RS11520 PF00571 CBS domain sake_RS11525 PF00528 Binding-protein-dependent transport system inner membrane component sake_RS11530 PF01053 Cys/Met metabolism PLP-dependent enzyme sake_RS11535 PF13380 CoA binding domain sake_RS11545 PF07690 Major Facilitator Superfamily sake_RS11560 PF00324 Amino acid permease sake_RS11565 PF02423 Ornithine cyclodeaminase/mu-crystallin family sake_RS11575 PF00324 Amino acid permease sake_RS11580 PF00324 Amino acid permease sake_RS11585 PF00920 Dehydratase family sake_RS11590 PF00005 ABC transporter sake_RS11590 PF02361 Cobalt transport protein sake_RS11595 PF02361 Cobalt transport protein sake_RS11605 PF01156 Inosine-uridine preferring nucleoside hydrolase sake_RS11610 PF00324 Amino acid permease sake_RS11620 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 sake_RS11620 PF02378 Phosphotransferase system, EIIC sake_RS11620 PF00367 phosphotransferase system, EIIB sake_RS11625 PF01842 ACT domain sake_RS11625 PF00551 Formyl transferase sake_RS11630 PF02803 Thiolase, C-terminal domain sake_RS11630 PF00108 Thiolase, N-terminal domain sake_RS11635 PF01544 CorA-like Mg2+ transporter protein sake_RS11640 PF00709 Adenylosuccinate synthetase sake_RS11650 PF05222 Alanine dehydrogenase/PNT, N-terminal domain sake_RS11650 PF01262 Alanine dehydrogenase/PNT, C-terminal domain sake_RS11660 PF01116 Fructose-bisphosphate aldolase class-II sake_RS11680 PF00156 Phosphoribosyl transferase domain sake_RS11685 PF00425 chorismate binding enzyme sake_RS11685 PF00117 Glutamine amidotransferase class-I sake_RS11685 PF04715 Anthranilate synthase component I, N terminal region sake_RS11690 PF01645 Conserved region in glutamate synthase sake_RS11695 PF02770 Acyl-CoA dehydrogenase, middle domain sake_RS11695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain sake_RS11695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain sake_RS11700 PF00501 AMP-binding enzyme sake_RS11700 PF13193 AMP-binding enzyme C-terminal domain sake_RS11705 PF00108 Thiolase, N-terminal domain sake_RS11705 PF02803 Thiolase, C-terminal domain sake_RS11710 PF00106 short chain dehydrogenase sake_RS11715 PF02770 Acyl-CoA dehydrogenase, middle domain sake_RS11715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain sake_RS11715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain sake_RS11720 PF02540 NAD synthase sake_RS11725 PF13193 AMP-binding enzyme C-terminal domain sake_RS11725 PF00501 AMP-binding enzyme sake_RS11740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold sake_RS11740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain sake_RS11745 PF00378 Enoyl-CoA hydratase/isomerase sake_RS11750 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase sake_RS11750 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase sake_RS11755 PF00378 Enoyl-CoA hydratase/isomerase sake_RS11760 PF00171 Aldehyde dehydrogenase family sake_RS11780 PF01209 ubiE/COQ5 methyltransferase family sake_RS11785 PF00248 Aldo/keto reductase family sake_RS11800 PF00107 Zinc-binding dehydrogenase sake_RS11800 PF08240 Alcohol dehydrogenase GroES-like domain sake_RS11805 PF00583 Acetyltransferase (GNAT) family sake_RS11810 PF13302 Acetyltransferase (GNAT) domain sake_RS11815 PF07690 Major Facilitator Superfamily sake_RS11830 PF13302 Acetyltransferase (GNAT) domain sake_RS11835 PF00083 Sugar (and other) transporter sake_RS11835 PF08946 Osmosensory transporter coiled coil sake_RS11850 PF01042 Endoribonuclease L-PSP sake_RS11860 PF03466 LysR substrate binding domain sake_RS11860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family sake_RS11880 PF00582 Universal stress protein family sake_RS11885 PF07992 Pyridine nucleotide-disulphide oxidoreductase sake_RS11890 PF01431 Peptidase family M13 sake_RS11890 PF05649 Peptidase family M13 sake_RS11895 PF00294 pfkB family carbohydrate kinase sake_RS11900 PF03746 LamB/YcsF family sake_RS11905 PF09594 Glycosyltransferase family 87 sake_RS11920 PF04030 D-arabinono-1,4-lactone oxidase sake_RS11920 PF01565 FAD binding domain sake_RS11930 PF00171 Aldehyde dehydrogenase family sake_RS11940 PF00581 Rhodanese-like domain sake_RS11945 PF00155 Aminotransferase class I and II sake_RS11950 PF00491 Arginase family sake_RS11955 PF03881 Fructosamine kinase sake_RS11960 PF03009 Glycerophosphoryl diester phosphodiesterase family sake_RS11970 PF07883 Cupin domain sake_RS11970 PF01381 Helix-turn-helix sake_RS11975 PF00474 Sodium:solute symporter family sake_RS11980 PF00205 Thiamine pyrophosphate enzyme, central domain sake_RS11980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain sake_RS11980 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain sake_RS11995 PF02537 CrcB-like protein, Camphor Resistance (CrcB) sake_RS12000 PF02537 CrcB-like protein, Camphor Resistance (CrcB) sake_RS12005 PF07729 FCD domain sake_RS12005 PF00392 Bacterial regulatory proteins, gntR family sake_RS12010 PF07690 Major Facilitator Superfamily sake_RS12015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain sake_RS12015 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain sake_RS12020 PF10604 Polyketide cyclase / dehydrase and lipid transport sake_RS12045 PF00171 Aldehyde dehydrogenase family sake_RS12050 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain sake_RS12050 PF02777 Iron/manganese superoxide dismutases, C-terminal domain sake_RS12055 PF00107 Zinc-binding dehydrogenase sake_RS12055 PF08240 Alcohol dehydrogenase GroES-like domain sake_RS12065 PF00732 GMC oxidoreductase sake_RS12065 PF05199 GMC oxidoreductase sake_RS12070 PF01161 Phosphatidylethanolamine-binding protein sake_RS12090 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain sake_RS12090 PF17203 Single cache domain 3 sake_RS12090 PF00989 PAS fold sake_RS12090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase sake_RS12095 PF07859 alpha/beta hydrolase fold sake_RS12110 PF07690 Major Facilitator Superfamily sake_RS12115 PF00754 F5/8 type C domain sake_RS12115 PF13088 BNR repeat-like domain sake_RS12115 PF02973 Sialidase, N-terminal domain sake_RS12125 PF00392 Bacterial regulatory proteins, gntR family sake_RS12125 PF07729 FCD domain sake_RS12130 PF03600 Citrate transporter sake_RS12140 PF08543 Phosphomethylpyrimidine kinase sake_RS12140 PF02581 Thiamine monophosphate synthase sake_RS12140 PF03070 TENA/THI-4/PQQC family sake_RS12145 PF08543 Phosphomethylpyrimidine kinase sake_RS12150 PF02581 Thiamine monophosphate synthase sake_RS12155 PF02110 Hydroxyethylthiazole kinase family sake_RS12160 PF01243 Pyridoxamine 5'-phosphate oxidase sake_RS12160 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region sake_RS12165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family sake_RS12165 PF03466 LysR substrate binding domain sake_RS12180 PF00528 Binding-protein-dependent transport system inner membrane component sake_RS12185 PF00528 Binding-protein-dependent transport system inner membrane component sake_RS12190 PF00571 CBS domain sake_RS12190 PF00005 ABC transporter sake_RS12195 PF00392 Bacterial regulatory proteins, gntR family sake_RS12195 PF07702 UTRA domain sake_RS12205 PF06965 Na+/H+ antiporter 1 sake_RS12215 PF09924 Uncharacterised conserved protein (DUF2156) sake_RS12215 PF01336 OB-fold nucleic acid binding domain sake_RS12215 PF16995 Transmembrane region of lysyl-tRNA synthetase sake_RS12215 PF00152 tRNA synthetases class II (D, K and N) sake_RS12255 PF02447 GntP family permease sake_RS12260 PF01235 Sodium:alanine symporter family sake_RS12265 PF00756 Putative esterase sake_RS12265 PF08310 LGFP repeat sake_RS12280 PF00324 Amino acid permease sake_RS12285 PF00202 Aminotransferase class-III sake_RS12290 PF00171 Aldehyde dehydrogenase family sake_RS12295 PF00171 Aldehyde dehydrogenase family sake_RS12305 PF01593 Flavin containing amine oxidoreductase sake_RS12320 PF01425 Amidase sake_RS12325 PF04371 Porphyromonas-type peptidyl-arginine deiminase sake_RS12335 PF00106 short chain dehydrogenase sake_RS12345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain sake_RS12345 PF02770 Acyl-CoA dehydrogenase, middle domain sake_RS12345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain sake_RS12350 PF00501 AMP-binding enzyme sake_RS12350 PF13193 AMP-binding enzyme C-terminal domain sake_RS12355 PF01575 MaoC like domain sake_RS12360 PF07690 Major Facilitator Superfamily sake_RS12360 PF00083 Sugar (and other) transporter sake_RS12410 PF07992 Pyridine nucleotide-disulphide oxidoreductase sake_RS12410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain sake_RS12415 PF13411 MerR HTH family regulatory protein sake_RS12425 PF04151 Bacterial pre-peptidase C-terminal domain sake_RS12425 PF00082 Subtilase family sake_RS12430 PF03328 HpcH/HpaI aldolase/citrate lyase family sake_RS12435 PF01557 Fumarylacetoacetate (FAA) hydrolase family sake_RS12440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily sake_RS12445 PF00171 Aldehyde dehydrogenase family sake_RS12450 PF00392 Bacterial regulatory proteins, gntR family sake_RS12450 PF07729 FCD domain sake_RS12455 PF03737 Aldolase/RraA sake_RS12460 PF07690 Major Facilitator Superfamily sake_RS12460 PF00083 Sugar (and other) transporter sake_RS12465 PF00324 Amino acid permease sake_RS12475 PF12146 Serine aminopeptidase, S33 sake_RS12485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain sake_RS12485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain sake_RS12485 PF00205 Thiamine pyrophosphate enzyme, central domain sake_RS12490 PF01614 Bacterial transcriptional regulator sake_RS12490 PF09339 IclR helix-turn-helix domain sake_RS12495 PF07976 Phenol hydroxylase, C-terminal dimerisation domain sake_RS12495 PF01494 FAD binding domain sake_RS12500 PF01546 Peptidase family M20/M25/M40 sake_RS12500 PF07687 Peptidase dimerisation domain sake_RS12510 PF00171 Aldehyde dehydrogenase family sake_RS12515 PF00732 GMC oxidoreductase sake_RS12515 PF05199 GMC oxidoreductase sake_RS12520 PF01565 FAD binding domain sake_RS12520 PF02913 FAD linked oxidases, C-terminal domain sake_RS12525 PF05088 Bacterial NAD-glutamate dehydrogenase sake_RS12530 PF02656 Domain of unknown function (DUF202) sake_RS12535 PF02656 Domain of unknown function (DUF202) sake_RS12540 PF05088 Bacterial NAD-glutamate dehydrogenase sake_RS12565 PF00535 Glycosyl transferase family 2 sake_RS12600 PF00296 Luciferase-like monooxygenase sake_RS12605 PF00324 Amino acid permease sake_RS12610 PF00135 Carboxylesterase family sake_RS12620 PF00083 Sugar (and other) transporter sake_RS12625 PF00710 Asparaginase, N-terminal sake_RS12625 PF17763 Glutaminase/Asparaginase C-terminal domain sake_RS12630 PF00890 FAD binding domain sake_RS12635 PF03458 UPF0126 domain sake_RS12640 PF07411 Domain of unknown function (DUF1508) sake_RS12645 PF08946 Osmosensory transporter coiled coil sake_RS12645 PF00083 Sugar (and other) transporter sake_RS12650 PF00248 Aldo/keto reductase family sake_RS12660 PF00083 Sugar (and other) transporter sake_RS12665 PF13638 PIN domain sake_RS12665 PF02562 PhoH-like protein sake_RS12670 PF01183 Glycosyl hydrolases family 25 sake_RS12690 PF00083 Sugar (and other) transporter sake_RS12690 PF07690 Major Facilitator Superfamily sake_RS12695 PF01546 Peptidase family M20/M25/M40 sake_RS12700 PF01979 Amidohydrolase family sake_RS12710 PF00196 Bacterial regulatory proteins, luxR family sake_RS12710 PF00072 Response regulator receiver domain sake_RS12715 PF07730 Histidine kinase sake_RS12725 PF02668 Taurine catabolism dioxygenase TauD, TfdA family sake_RS12735 PF08501 Shikimate dehydrogenase substrate binding domain sake_RS12735 PF18317 Shikimate 5'-dehydrogenase C-terminal domain sake_RS12740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily sake_RS12755 PF02796 Helix-turn-helix domain of resolvase sake_RS12755 PF00239 Resolvase, N terminal domain sake_RS12770 PF13302 Acetyltransferase (GNAT) domain sake_RS12780 PF07690 Major Facilitator Superfamily sake_RS12780 PF00083 Sugar (and other) transporter sake_RS12785 PF01594 AI-2E family transporter sake_RS12790 PF00296 Luciferase-like monooxygenase sake_RS12795 PF07690 Major Facilitator Superfamily sake_RS12795 PF00083 Sugar (and other) transporter sake_RS12805 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal sake_RS12805 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III sake_RS12815 PF07690 Major Facilitator Superfamily sake_RS12820 PF00857 Isochorismatase family sake_RS12825 PF00282 Pyridoxal-dependent decarboxylase conserved domain sake_RS12830 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) sake_RS12840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain sake_RS12840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain sake_RS12845 PF03466 LysR substrate binding domain sake_RS12845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family sake_RS12850 PF09423 PhoD-like phosphatase sake_RS12850 PF16655 PhoD-like phosphatase, N-terminal domain sake_RS12855 PF07859 alpha/beta hydrolase fold sake_RS12865 PF04143 Sulphur transport sake_RS12870 PF07690 Major Facilitator Superfamily sake_RS12885 PF17755 UvrA DNA-binding domain sake_RS12895 PF00809 Pterin binding enzyme sake_RS12900 PF04978 Protein of unknown function (DUF664) sake_RS12905 PF00324 Amino acid permease sake_RS12925 PF13382 Adenine deaminase C-terminal domain sake_RS12925 PF01979 Amidohydrolase family sake_RS12930 PF00106 short chain dehydrogenase sake_RS12935 PF00444 Ribosomal protein L36 sake_RS12945 PF00083 Sugar (and other) transporter sake_RS12950 PF01546 Peptidase family M20/M25/M40 sake_RS12950 PF07687 Peptidase dimerisation domain sake_RS12955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily sake_RS12960 PF03737 Aldolase/RraA sake_RS12965 PF04909 Amidohydrolase sake_RS12970 PF04303 PrpF protein sake_RS12975 PF00083 Sugar (and other) transporter sake_RS12980 PF04909 Amidohydrolase sake_RS12990 PF07690 Major Facilitator Superfamily sake_RS13000 PF08240 Alcohol dehydrogenase GroES-like domain sake_RS13000 PF00107 Zinc-binding dehydrogenase sake_RS13005 PF00248 Aldo/keto reductase family sake_RS13010 PF00291 Pyridoxal-phosphate dependent enzyme sake_RS13015 PF03796 DnaB-like helicase C terminal domain sake_RS13015 PF00772 DnaB-like helicase N terminal domain sake_RS13020 PF02595 Glycerate kinase family sake_RS13030 PF01281 Ribosomal protein L9, N-terminal domain sake_RS13030 PF03948 Ribosomal protein L9, C-terminal domain sake_RS13035 PF01084 Ribosomal protein S18 sake_RS13040 PF00436 Single-strand binding protein family sake_RS13045 PF01250 Ribosomal protein S6 sake_RS13060 PF00005 ABC transporter sake_RS13065 PF12627 Probable RNA and SrmB- binding site of polymerase A sake_RS13065 PF01743 Poly A polymerase head domain sake_RS13065 PF13735 tRNA nucleotidyltransferase domain 2 putative sake_RS13070 PF00293 NUDIX domain sake_RS13075 PF03023 Lipid II flippase MurJ sake_RS13085 PF07992 Pyridine nucleotide-disulphide oxidoreductase sake_RS13090 PF00085 Thioredoxin sake_RS13095 PF17762 HTH domain found in ParB protein sake_RS13095 PF02195 ParB-like nuclease domain sake_RS13100 PF13614 AAA domain sake_RS13105 PF02527 rRNA small subunit methyltransferase G sake_RS13110 PF14804 Jag N-terminus sake_RS13110 PF01424 R3H domain sake_RS13115 PF02096 60Kd inner membrane protein sake_RS13120 PF01809 Putative membrane protein insertion efficiency factor sake_RS13125 PF00825 Ribonuclease P sake_RS13130 PF00468 Ribosomal protein L34 sake_RS13140 PF00239 Resolvase, N terminal domain sake_RS13140 PF02796 Helix-turn-helix domain of resolvase sake_RS13150 PF03806 AbgT putative transporter family sake_RS13170 PF08240 Alcohol dehydrogenase GroES-like domain sake_RS13180 PF01451 Low molecular weight phosphotyrosine protein phosphatase sake_RS13185 PF01758 Sodium Bile acid symporter family sake_RS13190 PF00743 Flavin-binding monooxygenase-like sake_RS13205 PF02796 Helix-turn-helix domain of resolvase sake_RS13205 PF00239 Resolvase, N terminal domain sake_RS13240 PF03389 MobA/MobL family sake_RS13240 PF17841 BID domain of Bartonella effector protein (Bep) sake_RS13240 PF01443 Viral (Superfamily 1) RNA helicase sake_RS13260 PF07015 VirC1 protein sake_RS13270 PF00436 Single-strand binding protein family