locus-tag class description DN607_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix DN607_RS00005 PF00308 Bacterial dnaA protein DN607_RS00005 PF11638 DnaA N-terminal domain DN607_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DN607_RS00010 PF02767 DNA polymerase III beta subunit, central domain DN607_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DN607_RS00020 PF02463 RecF/RecN/SMC N terminal domain DN607_RS00025 PF00204 DNA gyrase B DN607_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus DN607_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS00025 PF01751 Toprim domain DN607_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A DN607_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller DN607_RS00035 PF01132 Elongation factor P (EF-P) OB domain DN607_RS00035 PF08207 Elongation factor P (EF-P) KOW-like domain DN607_RS00035 PF09285 Elongation factor P, C-terminal DN607_RS00040 PF00107 Zinc-binding dehydrogenase DN607_RS00040 PF08240 Alcohol dehydrogenase GroES-like domain DN607_RS00045 PF01116 Fructose-bisphosphate aldolase class-II DN607_RS00050 PF08240 Alcohol dehydrogenase GroES-like domain DN607_RS00050 PF00107 Zinc-binding dehydrogenase DN607_RS00060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN607_RS00060 PF00874 PRD domain DN607_RS00060 PF05043 Mga helix-turn-helix domain DN607_RS00060 PF08279 HTH domain DN607_RS00065 PF00381 PTS HPr component phosphorylation site DN607_RS00075 PF03613 PTS system mannose/fructose/sorbose family IID component DN607_RS00080 PF03610 PTS system fructose IIA component DN607_RS00085 PF03830 PTS system sorbose subfamily IIB component DN607_RS00090 PF08240 Alcohol dehydrogenase GroES-like domain DN607_RS00090 PF00107 Zinc-binding dehydrogenase DN607_RS00100 PF01380 SIS domain DN607_RS00105 PF08240 Alcohol dehydrogenase GroES-like domain DN607_RS00105 PF00107 Zinc-binding dehydrogenase DN607_RS00120 PF00381 PTS HPr component phosphorylation site DN607_RS00125 PF00391 PEP-utilising enzyme, mobile domain DN607_RS00125 PF05524 PEP-utilising enzyme, N-terminal DN607_RS00125 PF02896 PEP-utilising enzyme, TIM barrel domain DN607_RS00140 PF01022 Bacterial regulatory protein, arsR family DN607_RS00145 PF05681 Fumarate hydratase (Fumerase) DN607_RS00215 PF00768 D-alanyl-D-alanine carboxypeptidase DN607_RS00215 PF07943 Penicillin-binding protein 5, C-terminal domain DN607_RS00220 PF00133 tRNA synthetases class I (I, L, M and V) DN607_RS00220 PF08264 Anticodon-binding domain of tRNA DN607_RS00225 PF00343 Carbohydrate phosphorylase DN607_RS00235 PF08486 Stage II sporulation protein DN607_RS00245 PF01541 GIY-YIG catalytic domain DN607_RS00250 PF02915 Rubrerythrin DN607_RS00255 PF02915 Rubrerythrin DN607_RS00260 PF01475 Ferric uptake regulator family DN607_RS00265 PF00877 NlpC/P60 family DN607_RS00275 PF05389 Negative regulator of genetic competence (MecA) DN607_RS00290 PF01520 N-acetylmuramoyl-L-alanine amidase DN607_RS00290 PF11741 AMIN domain DN607_RS00295 PF01300 Telomere recombination DN607_RS00295 PF03481 Putative GTP-binding controlling metal-binding DN607_RS00300 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN607_RS00315 PF00437 Type II/IV secretion system protein DN607_RS00385 PF00145 C-5 cytosine-specific DNA methylase DN607_RS00405 PF02773 S-adenosylmethionine synthetase, C-terminal domain DN607_RS00405 PF02772 S-adenosylmethionine synthetase, central domain DN607_RS00405 PF00438 S-adenosylmethionine synthetase, N-terminal domain DN607_RS00420 PF01555 DNA methylase DN607_RS00495 PF00072 Response regulator receiver domain DN607_RS00495 PF00486 Transcriptional regulatory protein, C terminal DN607_RS00500 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS00500 PF07689 KaiB domain DN607_RS00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS00510 PF13005 zinc-finger binding domain of transposase IS66 DN607_RS00510 PF13007 Transposase C of IS166 homeodomain DN607_RS00510 PF13817 IS66 C-terminal element DN607_RS00510 PF03050 Transposase IS66 family DN607_RS00595 PF00145 C-5 cytosine-specific DNA methylase DN607_RS00615 PF04203 Sortase domain DN607_RS00635 PF00438 S-adenosylmethionine synthetase, N-terminal domain DN607_RS00635 PF02773 S-adenosylmethionine synthetase, C-terminal domain DN607_RS00635 PF02772 S-adenosylmethionine synthetase, central domain DN607_RS00655 PF01694 Rhomboid family DN607_RS00660 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS00660 PF00989 PAS fold DN607_RS00660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS00665 PF01230 HIT domain DN607_RS00675 PF04101 Glycosyltransferase family 28 C-terminal domain DN607_RS00675 PF03033 Glycosyltransferase family 28 N-terminal domain DN607_RS00700 PF00694 Aconitase C-terminal domain DN607_RS00700 PF00330 Aconitase family (aconitate hydratase) DN607_RS00715 PF01026 TatD related DNase DN607_RS00720 PF00398 Ribosomal RNA adenine dimethylase DN607_RS00725 PF00285 Citrate synthase, C-terminal domain DN607_RS00760 PF00056 lactate/malate dehydrogenase, NAD binding domain DN607_RS00760 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN607_RS00765 PF03466 LysR substrate binding domain DN607_RS00765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN607_RS00775 PF00072 Response regulator receiver domain DN607_RS00775 PF00486 Transcriptional regulatory protein, C terminal DN607_RS00780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS00780 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS00780 PF00672 HAMP domain DN607_RS00795 PF02954 Bacterial regulatory protein, Fis family DN607_RS00795 PF13188 PAS domain DN607_RS00795 PF00158 Sigma-54 interaction domain DN607_RS00800 PF03313 Serine dehydratase alpha chain DN607_RS00820 PF01546 Peptidase family M20/M25/M40 DN607_RS00820 PF07687 Peptidase dimerisation domain DN607_RS00855 PF13735 tRNA nucleotidyltransferase domain 2 putative DN607_RS00855 PF01743 Poly A polymerase head domain DN607_RS00855 PF12627 Probable RNA and SrmB- binding site of polymerase A DN607_RS00865 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DN607_RS00865 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DN607_RS00865 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DN607_RS00865 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DN607_RS00870 PF00216 Bacterial DNA-binding protein DN607_RS00875 PF01479 S4 domain DN607_RS00880 PF07873 YabP family DN607_RS00900 PF01171 PP-loop family DN607_RS00900 PF11734 TilS substrate C-terminal domain DN607_RS00905 PF01171 PP-loop family DN607_RS00905 PF00156 Phosphoribosyl transferase domain DN607_RS00905 PF11734 TilS substrate C-terminal domain DN607_RS00910 PF01434 Peptidase family M41 DN607_RS00910 PF06480 FtsH Extracellular DN607_RS00910 PF17862 AAA+ lid domain DN607_RS00910 PF00004 ATPase family associated with various cellular activities (AAA) DN607_RS00915 PF00128 Alpha amylase, catalytic domain DN607_RS00915 PF02903 Alpha amylase, N-terminal ig-like domain DN607_RS00925 PF00557 Metallopeptidase family M24 DN607_RS00930 PF00365 Phosphofructokinase DN607_RS00935 PF12169 DNA polymerase III subunits gamma and tau domain III DN607_RS00940 PF02575 YbaB/EbfC DNA-binding family DN607_RS00945 PF13662 Toprim domain DN607_RS00945 PF02132 RecR protein DN607_RS00950 PF00456 Transketolase, thiamine diphosphate binding domain DN607_RS00955 PF02779 Transketolase, pyrimidine binding domain DN607_RS00955 PF02780 Transketolase, C-terminal domain DN607_RS00960 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) DN607_RS00960 PF12733 Cadherin-like beta sandwich domain DN607_RS00965 PF01554 MatE DN607_RS00985 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DN607_RS00985 PF02780 Transketolase, C-terminal domain DN607_RS00985 PF02779 Transketolase, pyrimidine binding domain DN607_RS01010 PF00004 ATPase family associated with various cellular activities (AAA) DN607_RS01010 PF06480 FtsH Extracellular DN607_RS01010 PF01434 Peptidase family M41 DN607_RS01010 PF17862 AAA+ lid domain DN607_RS01015 PF04552 Sigma-54, DNA binding domain DN607_RS01015 PF04963 Sigma-54 factor, core binding domain DN607_RS01015 PF00309 Sigma-54 factor, Activator interacting domain (AID) DN607_RS01035 PF10502 Signal peptidase, peptidase S26 DN607_RS01045 PF04203 Sortase domain DN607_RS01050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN607_RS01050 PF02602 Uroporphyrinogen-III synthase HemD DN607_RS01055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN607_RS01060 PF06180 Cobalt chelatase (CbiK) DN607_RS01065 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DN607_RS01065 PF03900 Porphobilinogen deaminase, C-terminal domain DN607_RS01070 PF00528 Binding-protein-dependent transport system inner membrane component DN607_RS01075 PF00528 Binding-protein-dependent transport system inner membrane component DN607_RS01075 PF12911 N-terminal TM domain of oligopeptide transport permease C DN607_RS01080 PF00005 ABC transporter DN607_RS01080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN607_RS01100 PF00465 Iron-containing alcohol dehydrogenase DN607_RS01105 PF04203 Sortase domain DN607_RS01110 PF06107 Bacterial protein of unknown function (DUF951) DN607_RS01115 PF01250 Ribosomal protein S6 DN607_RS01120 PF00436 Single-strand binding protein family DN607_RS01125 PF01084 Ribosomal protein S18 DN607_RS01130 PF01170 Putative RNA methylase family UPF0020 DN607_RS01130 PF02926 THUMP domain DN607_RS01135 PF01725 Ham1 family DN607_RS01190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN607_RS01190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN607_RS01195 PF02913 FAD linked oxidases, C-terminal domain DN607_RS01195 PF01565 FAD binding domain DN607_RS01205 PF00766 Electron transfer flavoprotein FAD-binding domain DN607_RS01205 PF01012 Electron transfer flavoprotein domain DN607_RS01210 PF04309 Glycerol-3-phosphate responsive antiterminator DN607_RS01220 PF01012 Electron transfer flavoprotein domain DN607_RS01225 PF01012 Electron transfer flavoprotein domain DN607_RS01225 PF00766 Electron transfer flavoprotein FAD-binding domain DN607_RS01230 PF02028 BCCT, betaine/carnitine/choline family transporter DN607_RS01235 PF01975 Survival protein SurE DN607_RS01245 PF02378 Phosphotransferase system, EIIC DN607_RS01245 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN607_RS01255 PF00899 ThiF family DN607_RS01260 PF05690 Thiazole biosynthesis protein ThiG DN607_RS01270 PF02581 Thiamine monophosphate synthase DN607_RS01290 PF04324 BFD-like [2Fe-2S] binding domain DN607_RS01290 PF01266 FAD dependent oxidoreductase DN607_RS01305 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain DN607_RS01305 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain DN607_RS01310 PF02811 PHP domain DN607_RS01320 PF00391 PEP-utilising enzyme, mobile domain DN607_RS01320 PF05524 PEP-utilising enzyme, N-terminal DN607_RS01320 PF02896 PEP-utilising enzyme, TIM barrel domain DN607_RS01325 PF00381 PTS HPr component phosphorylation site DN607_RS01330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN607_RS01340 PF03611 PTS system sugar-specific permease component DN607_RS01345 PF17853 GGDEF-like domain DN607_RS01345 PF13556 PucR C-terminal helix-turn-helix domain DN607_RS01350 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN607_RS01350 PF02378 Phosphotransferase system, EIIC DN607_RS01350 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN607_RS01355 PF00874 PRD domain DN607_RS01355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN607_RS01355 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN607_RS01355 PF08279 HTH domain DN607_RS01355 PF05043 Mga helix-turn-helix domain DN607_RS01370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN607_RS01375 PF00107 Zinc-binding dehydrogenase DN607_RS01375 PF08240 Alcohol dehydrogenase GroES-like domain DN607_RS01380 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DN607_RS01380 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DN607_RS01385 PF05025 RbsD / FucU transport protein family DN607_RS01400 PF00005 ABC transporter DN607_RS01425 PF00684 DnaJ central domain DN607_RS01425 PF00226 DnaJ domain DN607_RS01425 PF01556 DnaJ C terminal domain DN607_RS01460 PF13419 Haloacid dehalogenase-like hydrolase DN607_RS01465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DN607_RS01465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN607_RS01470 PF02146 Sir2 family DN607_RS01475 PF02926 THUMP domain DN607_RS01475 PF01170 Putative RNA methylase family UPF0020 DN607_RS01475 PF10672 S-adenosylmethionine-dependent methyltransferase DN607_RS01480 PF01206 Sulfurtransferase TusA DN607_RS01485 PF00586 AIR synthase related protein, N-terminal domain DN607_RS01485 PF02769 AIR synthase related protein, C-terminal domain DN607_RS01490 PF00266 Aminotransferase class-V DN607_RS01505 PF00338 Ribosomal protein S10p/S20e DN607_RS01510 PF00297 Ribosomal protein L3 DN607_RS01515 PF00573 Ribosomal protein L4/L1 family DN607_RS01520 PF00276 Ribosomal protein L23 DN607_RS01525 PF03947 Ribosomal Proteins L2, C-terminal domain DN607_RS01525 PF00181 Ribosomal Proteins L2, RNA binding domain DN607_RS01530 PF00203 Ribosomal protein S19 DN607_RS01535 PF00237 Ribosomal protein L22p/L17e DN607_RS01540 PF00189 Ribosomal protein S3, C-terminal domain DN607_RS01540 PF07650 KH domain DN607_RS01545 PF00252 Ribosomal protein L16p/L10e DN607_RS01550 PF00831 Ribosomal L29 protein DN607_RS01555 PF00366 Ribosomal protein S17 DN607_RS01560 PF00238 Ribosomal protein L14p/L23e DN607_RS01565 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DN607_RS01565 PF00467 KOW motif DN607_RS01570 PF00673 ribosomal L5P family C-terminus DN607_RS01570 PF00281 Ribosomal protein L5 DN607_RS01575 PF00253 Ribosomal protein S14p/S29e DN607_RS01580 PF00410 Ribosomal protein S8 DN607_RS01585 PF00347 Ribosomal protein L6 DN607_RS01590 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DN607_RS01595 PF00333 Ribosomal protein S5, N-terminal domain DN607_RS01595 PF03719 Ribosomal protein S5, C-terminal domain DN607_RS01600 PF00327 Ribosomal protein L30p/L7e DN607_RS01605 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DN607_RS01610 PF00344 SecY translocase DN607_RS01615 PF05191 Adenylate kinase, active site lid DN607_RS01625 PF01176 Translation initiation factor 1A / IF-1 DN607_RS01630 PF00444 Ribosomal protein L36 DN607_RS01635 PF00416 Ribosomal protein S13/S18 DN607_RS01640 PF00411 Ribosomal protein S11 DN607_RS01645 PF00163 Ribosomal protein S4/S9 N-terminal domain DN607_RS01645 PF01479 S4 domain DN607_RS01650 PF01000 RNA polymerase Rpb3/RpoA insert domain DN607_RS01650 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DN607_RS01650 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DN607_RS01655 PF01196 Ribosomal protein L17 DN607_RS01660 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN607_RS01710 PF01381 Helix-turn-helix DN607_RS01775 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DN607_RS01815 PF02195 ParB-like nuclease domain DN607_RS01815 PF17762 HTH domain found in ParB protein DN607_RS01835 PF02901 Pyruvate formate lyase-like DN607_RS01835 PF01228 Glycine radical DN607_RS01840 PF00239 Resolvase, N terminal domain DN607_RS01840 PF02796 Helix-turn-helix domain of resolvase DN607_RS01850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN607_RS01850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN607_RS01855 PF07486 Cell Wall Hydrolase DN607_RS01855 PF01471 Putative peptidoglycan binding domain DN607_RS01865 PF02673 Bacitracin resistance protein BacA DN607_RS01870 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN607_RS01875 PF00528 Binding-protein-dependent transport system inner membrane component DN607_RS01880 PF00005 ABC transporter DN607_RS01885 PF00730 HhH-GPD superfamily base excision DNA repair protein DN607_RS01885 PF14815 NUDIX domain DN607_RS01890 PF03807 NADP oxidoreductase coenzyme F420-dependent DN607_RS01890 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN607_RS01895 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN607_RS01905 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DN607_RS01910 PF00390 Malic enzyme, N-terminal domain DN607_RS01910 PF03949 Malic enzyme, NAD binding domain DN607_RS01915 PF00005 ABC transporter DN607_RS01920 PF00005 ABC transporter DN607_RS01925 PF02361 Cobalt transport protein DN607_RS01930 PF01416 tRNA pseudouridine synthase DN607_RS01935 PF01479 S4 domain DN607_RS01935 PF00579 tRNA synthetases class I (W and Y) DN607_RS02020 PF00572 Ribosomal protein L13 DN607_RS02025 PF00380 Ribosomal protein S9/S16 DN607_RS02035 PF00589 Phage integrase family DN607_RS02035 PF13495 Phage integrase, N-terminal SAM-like domain DN607_RS02095 PF13749 Putative ATP-dependent DNA helicase recG C-terminal DN607_RS02095 PF00270 DEAD/DEAH box helicase DN607_RS02095 PF17191 RecG wedge domain DN607_RS02100 PF03432 Relaxase/Mobilisation nuclease domain DN607_RS02125 PF01808 AICARFT/IMPCHase bienzyme DN607_RS02125 PF02142 MGS-like domain DN607_RS02135 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DN607_RS02140 PF00814 Glycoprotease family DN607_RS02145 PF00583 Acetyltransferase (GNAT) family DN607_RS02155 PF12706 Beta-lactamase superfamily domain DN607_RS02160 PF00814 Glycoprotease family DN607_RS02165 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DN607_RS02220 PF00375 Sodium:dicarboxylate symporter family DN607_RS02230 PF00107 Zinc-binding dehydrogenase DN607_RS02230 PF08240 Alcohol dehydrogenase GroES-like domain DN607_RS02235 PF00465 Iron-containing alcohol dehydrogenase DN607_RS02240 PF00392 Bacterial regulatory proteins, gntR family DN607_RS02240 PF07729 FCD domain DN607_RS02275 PF13419 Haloacid dehalogenase-like hydrolase DN607_RS02290 PF00849 RNA pseudouridylate synthase DN607_RS02320 PF00365 Phosphofructokinase DN607_RS02325 PF03816 Cell envelope-related transcriptional attenuator domain DN607_RS02330 PF02719 Polysaccharide biosynthesis protein DN607_RS02335 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DN607_RS02340 PF02397 Bacterial sugar transferase DN607_RS02350 PF00535 Glycosyl transferase family 2 DN607_RS02360 PF00534 Glycosyl transferases group 1 DN607_RS02360 PF13439 Glycosyltransferase Family 4 DN607_RS02365 PF00535 Glycosyl transferase family 2 DN607_RS02405 PF02397 Bacterial sugar transferase DN607_RS02410 PF04991 LicD family DN607_RS02415 PF00534 Glycosyl transferases group 1 DN607_RS02415 PF13439 Glycosyltransferase Family 4 DN607_RS02420 PF04991 LicD family DN607_RS02425 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DN607_RS02440 PF01943 Polysaccharide biosynthesis protein DN607_RS02445 PF01757 Acyltransferase family DN607_RS02475 PF00535 Glycosyl transferase family 2 DN607_RS02485 PF08666 SAF domain DN607_RS02485 PF03102 NeuB family DN607_RS02490 PF02348 Cytidylyltransferase DN607_RS02495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN607_RS02495 PF00205 Thiamine pyrophosphate enzyme, central domain DN607_RS02495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN607_RS02500 PF01370 NAD dependent epimerase/dehydratase family DN607_RS02505 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DN607_RS02510 PF16363 GDP-mannose 4,6 dehydratase DN607_RS02515 PF00483 Nucleotidyl transferase DN607_RS02520 PF02899 Phage integrase, N-terminal SAM-like domain DN607_RS02520 PF00589 Phage integrase family DN607_RS02540 PF00535 Glycosyl transferase family 2 DN607_RS02560 PF00535 Glycosyl transferase family 2 DN607_RS02565 PF03275 UDP-galactopyranose mutase DN607_RS02590 PF00535 Glycosyl transferase family 2 DN607_RS02595 PF06280 Fn3-like domain DN607_RS02595 PF00746 LPXTG cell wall anchor motif DN607_RS02595 PF00082 Subtilase family DN607_RS02595 PF02225 PA domain DN607_RS02600 PF01869 BadF/BadG/BcrA/BcrD ATPase family DN607_RS02630 PF03690 Uncharacterised protein family (UPF0160) DN607_RS02635 PF00892 EamA-like transporter family DN607_RS02645 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN607_RS02645 PF04324 BFD-like [2Fe-2S] binding domain DN607_RS02650 PF04324 BFD-like [2Fe-2S] binding domain DN607_RS02650 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN607_RS02655 PF01266 FAD dependent oxidoreductase DN607_RS02660 PF02423 Ornithine cyclodeaminase/mu-crystallin family DN607_RS02670 PF00543 Nitrogen regulatory protein P-II DN607_RS02680 PF01554 MatE DN607_RS02690 PF02554 Carbon starvation protein CstA DN607_RS02690 PF13722 5TM C-terminal transporter carbon starvation CstA DN607_RS02700 PF01235 Sodium:alanine symporter family DN607_RS02705 PF00455 DeoR C terminal sensor domain DN607_RS02705 PF08220 DeoR-like helix-turn-helix domain DN607_RS02710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN607_RS02710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN607_RS02715 PF00294 pfkB family carbohydrate kinase DN607_RS02720 PF01544 CorA-like Mg2+ transporter protein DN607_RS02740 PF03006 Haemolysin-III related DN607_RS02745 PF04607 Region found in RelA / SpoT proteins DN607_RS02755 PF00696 Amino acid kinase family DN607_RS02780 PF03062 MBOAT, membrane-bound O-acyltransferase family DN607_RS02795 PF00550 Phosphopantetheine attachment site DN607_RS02795 PF00501 AMP-binding enzyme DN607_RS02795 PF00668 Condensation domain DN607_RS02795 PF13193 AMP-binding enzyme C-terminal domain DN607_RS02795 PF00975 Thioesterase domain DN607_RS02800 PF03477 ATP cone domain DN607_RS02805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN607_RS02810 PF00528 Binding-protein-dependent transport system inner membrane component DN607_RS02815 PF00528 Binding-protein-dependent transport system inner membrane component DN607_RS02815 PF12911 N-terminal TM domain of oligopeptide transport permease C DN607_RS02820 PF00005 ABC transporter DN607_RS02820 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN607_RS02825 PF00005 ABC transporter DN607_RS02825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN607_RS02830 PF01416 tRNA pseudouridine synthase DN607_RS02835 PF03372 Endonuclease/Exonuclease/phosphatase family DN607_RS02840 PF07683 Cobalamin synthesis protein cobW C-terminal domain DN607_RS02840 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN607_RS02850 PF01522 Polysaccharide deacetylase DN607_RS02855 PF00120 Glutamine synthetase, catalytic domain DN607_RS02855 PF03951 Glutamine synthetase, beta-Grasp domain DN607_RS02865 PF01235 Sodium:alanine symporter family DN607_RS02870 PF01678 Diaminopimelate epimerase DN607_RS02900 PF02686 Glu-tRNAGln amidotransferase C subunit DN607_RS02905 PF01425 Amidase DN607_RS02910 PF02637 GatB domain DN607_RS02910 PF02934 GatB/GatE catalytic domain DN607_RS02915 PF00183 Hsp90 protein DN607_RS02925 PF01479 S4 domain DN607_RS02925 PF00849 RNA pseudouridylate synthase DN607_RS02930 PF01653 NAD-dependent DNA ligase adenylation domain DN607_RS02930 PF00533 BRCA1 C Terminus (BRCT) domain DN607_RS02930 PF12826 Helix-hairpin-helix motif DN607_RS02930 PF03120 NAD-dependent DNA ligase OB-fold domain DN607_RS02935 PF00085 Thioredoxin DN607_RS02940 PF06689 ClpX C4-type zinc finger DN607_RS02940 PF07724 AAA domain (Cdc48 subfamily) DN607_RS02940 PF10431 C-terminal, D2-small domain, of ClpB protein DN607_RS02945 PF00999 Sodium/hydrogen exchanger family DN607_RS02965 PF13416 Bacterial extracellular solute-binding protein DN607_RS02970 PF08402 TOBE domain DN607_RS02970 PF00005 ABC transporter DN607_RS02975 PF00528 Binding-protein-dependent transport system inner membrane component DN607_RS02980 PF00528 Binding-protein-dependent transport system inner membrane component DN607_RS02985 PF01546 Peptidase family M20/M25/M40 DN607_RS02985 PF07687 Peptidase dimerisation domain DN607_RS02990 PF01968 Hydantoinase/oxoprolinase DN607_RS02990 PF05378 Hydantoinase/oxoprolinase N-terminal region DN607_RS03005 PF01053 Cys/Met metabolism PLP-dependent enzyme DN607_RS03015 PF07724 AAA domain (Cdc48 subfamily) DN607_RS03015 PF06689 ClpX C4-type zinc finger DN607_RS03015 PF10431 C-terminal, D2-small domain, of ClpB protein DN607_RS03020 PF03063 Prismane/CO dehydrogenase family DN607_RS03045 PF00293 NUDIX domain DN607_RS03055 PF05683 Fumarase C-terminus DN607_RS03060 PF02445 Quinolinate synthetase A protein DN607_RS03065 PF00890 FAD binding domain DN607_RS03070 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DN607_RS03070 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DN607_RS03100 PF00733 Asparagine synthase DN607_RS03100 PF13537 Glutamine amidotransferase domain DN607_RS03105 PF00258 Flavodoxin DN607_RS03105 PF00753 Metallo-beta-lactamase superfamily DN607_RS03115 PF03551 Transcriptional regulator PadR-like family DN607_RS03135 PF00730 HhH-GPD superfamily base excision DNA repair protein DN607_RS03135 PF00633 Helix-hairpin-helix motif DN607_RS03150 PF04073 Aminoacyl-tRNA editing domain DN607_RS03155 PF08443 RimK-like ATP-grasp domain DN607_RS03160 PF08443 RimK-like ATP-grasp domain DN607_RS03170 PF13419 Haloacid dehalogenase-like hydrolase DN607_RS03180 PF02110 Hydroxyethylthiazole kinase family DN607_RS03185 PF02581 Thiamine monophosphate synthase DN607_RS03190 PF08543 Phosphomethylpyrimidine kinase DN607_RS03190 PF02581 Thiamine monophosphate synthase DN607_RS03200 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN607_RS03200 PF01872 RibD C-terminal domain DN607_RS03205 PF00677 Lumazine binding domain DN607_RS03210 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DN607_RS03210 PF00925 GTP cyclohydrolase II DN607_RS03215 PF00885 6,7-dimethyl-8-ribityllumazine synthase DN607_RS03225 PF04023 FeoA domain DN607_RS03225 PF07670 Nucleoside recognition DN607_RS03225 PF02421 Ferrous iron transport protein B DN607_RS03225 PF17910 FeoB cytosolic helical domain DN607_RS03225 PF07664 Ferrous iron transport protein B C terminus DN607_RS03235 PF13597 Anaerobic ribonucleoside-triphosphate reductase DN607_RS03235 PF03477 ATP cone domain DN607_RS03240 PF04055 Radical SAM superfamily DN607_RS03245 PF02901 Pyruvate formate lyase-like DN607_RS03245 PF01228 Glycine radical DN607_RS03260 PF01297 Zinc-uptake complex component A periplasmic DN607_RS03265 PF00005 ABC transporter DN607_RS03270 PF00950 ABC 3 transport family DN607_RS03275 PF01235 Sodium:alanine symporter family DN607_RS03280 PF00684 DnaJ central domain DN607_RS03280 PF00226 DnaJ domain DN607_RS03280 PF01556 DnaJ C terminal domain DN607_RS03285 PF00011 Hsp20/alpha crystallin family DN607_RS03290 PF01113 Dihydrodipicolinate reductase, N-terminus DN607_RS03290 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain DN607_RS03305 PF01925 Sulfite exporter TauE/SafE DN607_RS03310 PF00664 ABC transporter transmembrane region DN607_RS03310 PF00005 ABC transporter DN607_RS03320 PF07724 AAA domain (Cdc48 subfamily) DN607_RS03320 PF17871 AAA lid domain DN607_RS03320 PF10431 C-terminal, D2-small domain, of ClpB protein DN607_RS03320 PF00004 ATPase family associated with various cellular activities (AAA) DN607_RS03320 PF02861 Clp amino terminal domain, pathogenicity island component DN607_RS03325 PF00817 impB/mucB/samB family DN607_RS03325 PF11799 impB/mucB/samB family C-terminal domain DN607_RS03340 PF01225 Mur ligase family, catalytic domain DN607_RS03340 PF02875 Mur ligase family, glutamate ligase domain DN607_RS03340 PF08245 Mur ligase middle domain DN607_RS03345 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DN607_RS03345 PF04851 Type III restriction enzyme, res subunit DN607_RS03345 PF00271 Helicase conserved C-terminal domain DN607_RS03345 PF17764 3′ DNA-binding domain (3′BD) DN607_RS03345 PF18074 Primosomal protein N C-terminal domain DN607_RS03350 PF01327 Polypeptide deformylase DN607_RS03355 PF02911 Formyl transferase, C-terminal domain DN607_RS03355 PF00551 Formyl transferase DN607_RS03360 PF04298 Putative neutral zinc metallopeptidase DN607_RS03365 PF01029 NusB family DN607_RS03365 PF01189 16S rRNA methyltransferase RsmB/F DN607_RS03370 PF04055 Radical SAM superfamily DN607_RS03380 PF03793 PASTA domain DN607_RS03380 PF00069 Protein kinase domain DN607_RS03385 PF16745 RsgA N-terminal domain DN607_RS03385 PF03193 RsgA GTPase DN607_RS03390 PF00834 Ribulose-phosphate 3 epimerase family DN607_RS03400 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN607_RS03400 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN607_RS03405 PF01926 50S ribosome-binding GTPase DN607_RS03405 PF06071 Protein of unknown function (DUF933) DN607_RS03410 PF01790 Prolipoprotein diacylglyceryl transferase DN607_RS03415 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DN607_RS03415 PF10371 Domain of unknown function DN607_RS03415 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DN607_RS03415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN607_RS03415 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DN607_RS03420 PF04309 Glycerol-3-phosphate responsive antiterminator DN607_RS03425 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN607_RS03425 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN607_RS03430 PF00230 Major intrinsic protein DN607_RS03435 PF01266 FAD dependent oxidoreductase DN607_RS03440 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN607_RS03440 PF04324 BFD-like [2Fe-2S] binding domain DN607_RS03455 PF10431 C-terminal, D2-small domain, of ClpB protein DN607_RS03455 PF02861 Clp amino terminal domain, pathogenicity island component DN607_RS03455 PF17871 AAA lid domain DN607_RS03455 PF07724 AAA domain (Cdc48 subfamily) DN607_RS03455 PF00004 ATPase family associated with various cellular activities (AAA) DN607_RS03465 PF18073 Rubredoxin metal binding domain DN607_RS03490 PF02779 Transketolase, pyrimidine binding domain DN607_RS03490 PF02780 Transketolase, C-terminal domain DN607_RS03495 PF00456 Transketolase, thiamine diphosphate binding domain DN607_RS03500 PF03466 LysR substrate binding domain DN607_RS03500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN607_RS03515 PF00465 Iron-containing alcohol dehydrogenase DN607_RS03520 PF02082 Transcriptional regulator DN607_RS03525 PF00291 Pyridoxal-phosphate dependent enzyme DN607_RS03530 PF01053 Cys/Met metabolism PLP-dependent enzyme DN607_RS03535 PF02082 Transcriptional regulator DN607_RS03545 PF00224 Pyruvate kinase, barrel domain DN607_RS03545 PF02887 Pyruvate kinase, alpha/beta domain DN607_RS03545 PF00391 PEP-utilising enzyme, mobile domain DN607_RS03550 PF02632 BioY family DN607_RS03555 PF00465 Iron-containing alcohol dehydrogenase DN607_RS03565 PF00480 ROK family DN607_RS03570 PF02901 Pyruvate formate lyase-like DN607_RS03570 PF01228 Glycine radical DN607_RS03575 PF13187 4Fe-4S dicluster domain DN607_RS03575 PF04055 Radical SAM superfamily DN607_RS03580 PF01238 Phosphomannose isomerase type I DN607_RS03585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DN607_RS03585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN607_RS03590 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DN607_RS03595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DN607_RS03595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN607_RS03605 PF00392 Bacterial regulatory proteins, gntR family DN607_RS03605 PF07702 UTRA domain DN607_RS03610 PF13407 Periplasmic binding protein domain DN607_RS03615 PF00005 ABC transporter DN607_RS03620 PF02653 Branched-chain amino acid transport system / permease component DN607_RS03625 PF02653 Branched-chain amino acid transport system / permease component DN607_RS03640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DN607_RS03640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN607_RS03645 PF01791 DeoC/LacD family aldolase DN607_RS03650 PF12833 Helix-turn-helix domain DN607_RS03655 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DN607_RS03685 PF00709 Adenylosuccinate synthetase DN607_RS03695 PF02734 DAK2 domain DN607_RS03695 PF13684 Dihydroxyacetone kinase family DN607_RS03705 PF02446 4-alpha-glucanotransferase DN607_RS03710 PF00356 Bacterial regulatory proteins, lacI family DN607_RS03715 PF00528 Binding-protein-dependent transport system inner membrane component DN607_RS03720 PF00528 Binding-protein-dependent transport system inner membrane component DN607_RS03735 PF03459 TOBE domain DN607_RS03735 PF17912 MalK OB fold domain DN607_RS03735 PF00005 ABC transporter DN607_RS03760 PF01202 Shikimate kinase DN607_RS03770 PF00005 ABC transporter DN607_RS03770 PF00664 ABC transporter transmembrane region DN607_RS03775 PF00664 ABC transporter transmembrane region DN607_RS03775 PF00005 ABC transporter DN607_RS03790 PF03176 MMPL family DN607_RS03795 PF07702 UTRA domain DN607_RS03795 PF00392 Bacterial regulatory proteins, gntR family DN607_RS03800 PF00005 ABC transporter DN607_RS03810 PF07859 alpha/beta hydrolase fold DN607_RS03835 PF01842 ACT domain DN607_RS03835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN607_RS03835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN607_RS03845 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS03845 PF09308 LuxQ, periplasmic DN607_RS03845 PF00072 Response regulator receiver domain DN607_RS03845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS03850 PF00672 HAMP domain DN607_RS03850 PF00072 Response regulator receiver domain DN607_RS03850 PF01627 Hpt domain DN607_RS03850 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS03850 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DN607_RS03850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS03860 PF02661 Fic/DOC family DN607_RS03860 PF12728 Helix-turn-helix domain DN607_RS03880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN607_RS03880 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DN607_RS03940 PF00005 ABC transporter DN607_RS03940 PF02687 FtsX-like permease family DN607_RS03940 PF12704 MacB-like periplasmic core domain DN607_RS03945 PF06418 CTP synthase N-terminus DN607_RS03945 PF00117 Glutamine amidotransferase class-I DN607_RS03950 PF08903 Domain of unknown function (DUF1846) DN607_RS03955 PF01434 Peptidase family M41 DN607_RS03955 PF06480 FtsH Extracellular DN607_RS03955 PF17862 AAA+ lid domain DN607_RS03955 PF00004 ATPase family associated with various cellular activities (AAA) DN607_RS03960 PF02151 UvrB/uvrC motif DN607_RS03960 PF12826 Helix-hairpin-helix motif DN607_RS03960 PF01541 GIY-YIG catalytic domain DN607_RS03960 PF08459 UvrC Helix-hairpin-helix N-terminal DN607_RS03965 PF02603 HPr Serine kinase N terminus DN607_RS03965 PF07475 HPr Serine kinase C-terminal domain DN607_RS03970 PF00480 ROK family DN607_RS03975 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DN607_RS03975 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DN607_RS03975 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DN607_RS03975 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DN607_RS03980 PF00905 Penicillin binding protein transpeptidase domain DN607_RS03980 PF00912 Transglycosylase DN607_RS03990 PF01205 Uncharacterized protein family UPF0029 DN607_RS03990 PF09186 Domain of unknown function (DUF1949) DN607_RS03995 PF00872 Transposase, Mutator family DN607_RS04000 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DN607_RS04000 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DN607_RS04010 PF03144 Elongation factor Tu domain 2 DN607_RS04010 PF00679 Elongation factor G C-terminus DN607_RS04010 PF00009 Elongation factor Tu GTP binding domain DN607_RS04020 PF09308 LuxQ, periplasmic DN607_RS04020 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS04020 PF00072 Response regulator receiver domain DN607_RS04020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS04030 PF17863 AAA lid domain DN607_RS04030 PF07726 ATPase family associated with various cellular activities (AAA) DN607_RS04045 PF00701 Dihydrodipicolinate synthetase family DN607_RS04050 PF05173 Dihydrodipicolinate reductase, C-terminus DN607_RS04050 PF01113 Dihydrodipicolinate reductase, N-terminus DN607_RS04055 PF06874 Firmicute fructose-1,6-bisphosphatase DN607_RS04070 PF01043 SecA preprotein cross-linking domain DN607_RS04070 PF07516 SecA Wing and Scaffold domain DN607_RS04070 PF07517 SecA DEAD-like domain DN607_RS04070 PF02810 SEC-C motif DN607_RS04080 PF01842 ACT domain DN607_RS04080 PF00742 Homoserine dehydrogenase DN607_RS04080 PF03447 Homoserine dehydrogenase, NAD binding domain DN607_RS04085 PF01928 CYTH domain DN607_RS04095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DN607_RS04095 PF05698 Bacterial trigger factor protein (TF) C-terminus DN607_RS04095 PF05697 Bacterial trigger factor protein (TF) DN607_RS04100 PF00574 Clp protease DN607_RS04105 PF06689 ClpX C4-type zinc finger DN607_RS04105 PF10431 C-terminal, D2-small domain, of ClpB protein DN607_RS04105 PF07724 AAA domain (Cdc48 subfamily) DN607_RS04110 PF02190 ATP-dependent protease La (LON) substrate-binding domain DN607_RS04110 PF05362 Lon protease (S16) C-terminal proteolytic domain DN607_RS04110 PF00004 ATPase family associated with various cellular activities (AAA) DN607_RS04115 PF01926 50S ribosome-binding GTPase DN607_RS04120 PF01594 AI-2E family transporter DN607_RS04130 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DN607_RS04140 PF01699 Sodium/calcium exchanger protein DN607_RS04145 PF01569 PAP2 superfamily DN607_RS04150 PF02151 UvrB/uvrC motif DN607_RS04150 PF17757 UvrB interaction domain DN607_RS04150 PF04851 Type III restriction enzyme, res subunit DN607_RS04150 PF00271 Helicase conserved C-terminal domain DN607_RS04150 PF12344 Ultra-violet resistance protein B DN607_RS04210 PF00589 Phage integrase family DN607_RS04220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS04220 PF00672 HAMP domain DN607_RS04220 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS04260 PF02151 UvrB/uvrC motif DN607_RS04260 PF00271 Helicase conserved C-terminal domain DN607_RS04260 PF04851 Type III restriction enzyme, res subunit DN607_RS04260 PF17757 UvrB interaction domain DN607_RS04260 PF12344 Ultra-violet resistance protein B DN607_RS04265 PF17755 UvrA DNA-binding domain DN607_RS04265 PF17760 UvrA interaction domain DN607_RS04275 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DN607_RS04275 PF13538 UvrD-like helicase C-terminal domain DN607_RS04275 PF14490 Helix-hairpin-helix containing domain DN607_RS04280 PF00156 Phosphoribosyl transferase domain DN607_RS04295 PF02457 DisA bacterial checkpoint controller nucleotide-binding DN607_RS04305 PF00381 PTS HPr component phosphorylation site DN607_RS04305 PF05524 PEP-utilising enzyme, N-terminal DN607_RS04305 PF00391 PEP-utilising enzyme, mobile domain DN607_RS04305 PF03610 PTS system fructose IIA component DN607_RS04310 PF03816 Cell envelope-related transcriptional attenuator domain DN607_RS04320 PF17890 Peptidoglycan hydrolase LytB WW-like domain DN607_RS04320 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DN607_RS04320 PF18342 Endo-beta-N-acetylglucosaminidase LytB WW domain DN607_RS04320 PF01473 Putative cell wall binding repeat DN607_RS04325 PF08239 Bacterial SH3 domain DN607_RS04325 PF01183 Glycosyl hydrolases family 25 DN607_RS04335 PF00535 Glycosyl transferase family 2 DN607_RS04340 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DN607_RS04360 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DN607_RS04365 PF01467 Cytidylyltransferase-like DN607_RS04370 PF00266 Aminotransferase class-V DN607_RS04375 PF04991 LicD family DN607_RS04380 PF00535 Glycosyl transferase family 2 DN607_RS04385 PF13477 Glycosyl transferase 4-like DN607_RS04385 PF00534 Glycosyl transferases group 1 DN607_RS04390 PF00535 Glycosyl transferase family 2 DN607_RS04405 PF16363 GDP-mannose 4,6 dehydratase DN607_RS04410 PF00483 Nucleotidyl transferase DN607_RS04415 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DN607_RS04420 PF01061 ABC-2 type transporter DN607_RS04425 PF00005 ABC transporter DN607_RS04435 PF00535 Glycosyl transferase family 2 DN607_RS04445 PF16363 GDP-mannose 4,6 dehydratase DN607_RS04450 PF04321 RmlD substrate binding domain DN607_RS04455 PF00535 Glycosyl transferase family 2 DN607_RS04460 PF02397 Bacterial sugar transferase DN607_RS04470 PF00535 Glycosyl transferase family 2 DN607_RS04475 PF03816 Cell envelope-related transcriptional attenuator domain DN607_RS04490 PF01380 SIS domain DN607_RS04500 PF13180 PDZ domain DN607_RS04540 PF05067 Manganese containing catalase DN607_RS04545 PF00733 Asparagine synthase DN607_RS04545 PF13537 Glutamine amidotransferase domain DN607_RS04550 PF01098 Cell cycle protein DN607_RS04555 PF02645 Uncharacterised protein, DegV family COG1307 DN607_RS04565 PF02381 MraZ protein, putative antitoxin-like DN607_RS04570 PF01795 MraW methylase family DN607_RS04580 PF03793 PASTA domain DN607_RS04580 PF03717 Penicillin-binding Protein dimerisation domain DN607_RS04580 PF00905 Penicillin binding protein transpeptidase domain DN607_RS04585 PF03793 PASTA domain DN607_RS04585 PF03717 Penicillin-binding Protein dimerisation domain DN607_RS04585 PF00905 Penicillin binding protein transpeptidase domain DN607_RS04590 PF00953 Glycosyl transferase family 4 DN607_RS04595 PF02875 Mur ligase family, glutamate ligase domain DN607_RS04595 PF08245 Mur ligase middle domain DN607_RS04600 PF01098 Cell cycle protein DN607_RS04610 PF12327 FtsZ family, C-terminal domain DN607_RS04610 PF00091 Tubulin/FtsZ family, GTPase domain DN607_RS04615 PF03419 Sporulation factor SpoIIGA DN607_RS04620 PF04542 Sigma-70 region 2 DN607_RS04620 PF04545 Sigma-70, region 4 DN607_RS04625 PF12706 Beta-lactamase superfamily domain DN607_RS04625 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DN607_RS04625 PF17770 Ribonuclease J C-terminal domain DN607_RS04630 PF04539 Sigma-70 region 3 DN607_RS04630 PF04542 Sigma-70 region 2 DN607_RS04630 PF04545 Sigma-70, region 4 DN607_RS04635 PF13419 Haloacid dehalogenase-like hydrolase DN607_RS04655 PF01195 Peptidyl-tRNA hydrolase DN607_RS04660 PF17757 UvrB interaction domain DN607_RS04660 PF00271 Helicase conserved C-terminal domain DN607_RS04660 PF00270 DEAD/DEAH box helicase DN607_RS04660 PF02559 CarD-like/TRCF domain DN607_RS04660 PF03461 TRCF domain DN607_RS04690 PF00877 NlpC/P60 family DN607_RS04700 PF01022 Bacterial regulatory protein, arsR family DN607_RS04705 PF07853 Protein of unknown function (DUF1648) DN607_RS04705 PF13630 SdpI/YhfL protein family DN607_RS04720 PF12399 Branched-chain amino acid ATP-binding cassette transporter DN607_RS04720 PF00005 ABC transporter DN607_RS04725 PF00072 Response regulator receiver domain DN607_RS04725 PF00486 Transcriptional regulatory protein, C terminal DN607_RS04760 PF09035 Excisionase from transposon Tn916 DN607_RS04765 PF02920 DNA binding domain of tn916 integrase DN607_RS04765 PF00589 Phage integrase family DN607_RS04775 PF00072 Response regulator receiver domain DN607_RS04775 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS04775 PF09308 LuxQ, periplasmic DN607_RS04775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS04790 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN607_RS04790 PF15714 Stage V sporulation protein T C-terminal, transcription factor DN607_RS04800 PF04055 Radical SAM superfamily DN607_RS04800 PF06463 Molybdenum Cofactor Synthesis C DN607_RS04805 PF07549 SecD/SecF GG Motif DN607_RS04805 PF02355 Protein export membrane protein DN607_RS04810 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DN607_RS04810 PF01368 DHH family DN607_RS04810 PF02272 DHHA1 domain DN607_RS04810 PF17768 RecJ OB domain DN607_RS04815 PF02824 TGS domain DN607_RS04815 PF13291 ACT domain DN607_RS04815 PF04607 Region found in RelA / SpoT proteins DN607_RS04820 PF00753 Metallo-beta-lactamase superfamily DN607_RS04825 PF04055 Radical SAM superfamily DN607_RS04830 PF13393 Histidyl-tRNA synthetase DN607_RS04835 PF02938 GAD domain DN607_RS04835 PF01336 OB-fold nucleic acid binding domain DN607_RS04835 PF00152 tRNA synthetases class II (D, K and N) DN607_RS04840 PF11799 impB/mucB/samB family C-terminal domain DN607_RS04840 PF11798 IMS family HHH motif DN607_RS04840 PF00817 impB/mucB/samB family DN607_RS04860 PF02653 Branched-chain amino acid transport system / permease component DN607_RS04865 PF00005 ABC transporter DN607_RS04875 PF01842 ACT domain DN607_RS04875 PF03447 Homoserine dehydrogenase, NAD binding domain DN607_RS04875 PF00742 Homoserine dehydrogenase DN607_RS04880 PF01047 MarR family DN607_RS04885 PF00303 Thymidylate synthase DN607_RS04890 PF00186 Dihydrofolate reductase DN607_RS04895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN607_RS04895 PF00205 Thiamine pyrophosphate enzyme, central domain DN607_RS04895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN607_RS04900 PF10369 Small subunit of acetolactate synthase DN607_RS04905 PF01063 Amino-transferase class IV DN607_RS04910 PF00571 CBS domain DN607_RS04910 PF03448 MgtE intracellular N domain DN607_RS04910 PF01769 Divalent cation transporter DN607_RS04915 PF13649 Methyltransferase domain DN607_RS04920 PF01430 Hsp33 protein DN607_RS04925 PF00795 Carbon-nitrogen hydrolase DN607_RS04925 PF02540 NAD synthase DN607_RS04930 PF00575 S1 RNA binding domain DN607_RS04935 PF02833 DHHA2 domain DN607_RS04935 PF01368 DHH family DN607_RS04935 PF00571 CBS domain DN607_RS04935 PF07085 DRTGG domain DN607_RS04940 PF01613 Flavin reductase like domain DN607_RS04945 PF01554 MatE DN607_RS04950 PF01522 Polysaccharide deacetylase DN607_RS04955 PF16193 AAA C-terminal domain DN607_RS04955 PF12002 MgsA AAA+ ATPase C terminal DN607_RS04955 PF05496 Holliday junction DNA helicase RuvB P-loop domain DN607_RS04965 PF04055 Radical SAM superfamily DN607_RS04965 PF16199 Radical_SAM C-terminal domain DN607_RS04970 PF07497 Rho termination factor, RNA-binding domain DN607_RS04970 PF07498 Rho termination factor, N-terminal domain DN607_RS04970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN607_RS04975 PF01197 Ribosomal protein L31 DN607_RS04980 PF07136 Protein of unknown function (DUF1385) DN607_RS04985 PF05175 Methyltransferase small domain DN607_RS04985 PF17827 PrmC N-terminal domain DN607_RS04990 PF00472 RF-1 domain DN607_RS04990 PF03462 PCRF domain DN607_RS05000 PF00155 Aminotransferase class I and II DN607_RS05005 PF00155 Aminotransferase class I and II DN607_RS05015 PF01381 Helix-turn-helix DN607_RS05025 PF04551 GcpE protein DN607_RS05030 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN607_RS05030 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN607_RS05030 PF14579 Helix-hairpin-helix motif DN607_RS05030 PF02811 PHP domain DN607_RS05030 PF00929 Exonuclease DN607_RS05030 PF11490 DNA polymerase III polC-type N-terminus II DN607_RS05035 PF00464 Serine hydroxymethyltransferase DN607_RS05045 PF00313 'Cold-shock' DNA-binding domain DN607_RS05050 PF00381 PTS HPr component phosphorylation site DN607_RS05055 PF05524 PEP-utilising enzyme, N-terminal DN607_RS05055 PF00391 PEP-utilising enzyme, mobile domain DN607_RS05055 PF02896 PEP-utilising enzyme, TIM barrel domain DN607_RS05070 PF00356 Bacterial regulatory proteins, lacI family DN607_RS05085 PF02733 Dak1 domain DN607_RS05090 PF02734 DAK2 domain DN607_RS05095 PF00381 PTS HPr component phosphorylation site DN607_RS05095 PF00391 PEP-utilising enzyme, mobile domain DN607_RS05095 PF05524 PEP-utilising enzyme, N-terminal DN607_RS05095 PF03610 PTS system fructose IIA component DN607_RS05100 PF13307 Helicase C-terminal domain DN607_RS05100 PF04851 Type III restriction enzyme, res subunit DN607_RS05105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN607_RS05105 PF03466 LysR substrate binding domain DN607_RS05115 PF00586 AIR synthase related protein, N-terminal domain DN607_RS05115 PF02769 AIR synthase related protein, C-terminal domain DN607_RS05115 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DN607_RS05130 PF02542 YgbB family DN607_RS05140 PF00132 Bacterial transferase hexapeptide (six repeats) DN607_RS05145 PF09190 DALR domain DN607_RS05145 PF01406 tRNA synthetases class I (C) catalytic domain DN607_RS05150 PF00636 Ribonuclease III domain DN607_RS05155 PF00588 SpoU rRNA Methylase family DN607_RS05155 PF08032 RNA 2'-O ribose methyltransferase substrate binding DN607_RS05160 PF08281 Sigma-70, region 4 DN607_RS05160 PF04542 Sigma-70 region 2 DN607_RS05175 PF00226 DnaJ domain DN607_RS05175 PF01556 DnaJ C terminal domain DN607_RS05175 PF00684 DnaJ central domain DN607_RS05185 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DN607_RS05185 PF00749 tRNA synthetases class I (E and Q), catalytic domain DN607_RS05190 PF00155 Aminotransferase class I and II DN607_RS05190 PF00392 Bacterial regulatory proteins, gntR family DN607_RS05200 PF13091 PLD-like domain DN607_RS05205 PF00709 Adenylosuccinate synthetase DN607_RS05215 PF07517 SecA DEAD-like domain DN607_RS05215 PF07516 SecA Wing and Scaffold domain DN607_RS05215 PF01043 SecA preprotein cross-linking domain DN607_RS05215 PF02810 SEC-C motif DN607_RS05225 PF00248 Aldo/keto reductase family DN607_RS05235 PF00155 Aminotransferase class I and II DN607_RS05245 PF04204 Homoserine O-succinyltransferase DN607_RS05250 PF01594 AI-2E family transporter DN607_RS05255 PF00155 Aminotransferase class I and II DN607_RS05260 PF01070 FMN-dependent dehydrogenase DN607_RS05265 PF00692 dUTPase DN607_RS05270 PF03323 Bacillus/Clostridium GerA spore germination protein DN607_RS05275 PF02645 Uncharacterised protein, DegV family COG1307 DN607_RS05280 PF05198 Translation initiation factor IF-3, N-terminal domain DN607_RS05280 PF00707 Translation initiation factor IF-3, C-terminal domain DN607_RS05285 PF01632 Ribosomal protein L35 DN607_RS05290 PF00453 Ribosomal protein L20 DN607_RS05295 PF00291 Pyridoxal-phosphate dependent enzyme DN607_RS05315 PF03976 Polyphosphate kinase 2 (PPK2) DN607_RS05320 PF13286 Phosphohydrolase-associated domain DN607_RS05320 PF01966 HD domain DN607_RS05325 PF01807 CHC2 zinc finger DN607_RS05325 PF10410 DnaB-helicase binding domain of primase DN607_RS05325 PF08275 DNA primase catalytic core, N-terminal domain DN607_RS05330 PF04542 Sigma-70 region 2 DN607_RS05330 PF04539 Sigma-70 region 3 DN607_RS05330 PF04545 Sigma-70, region 4 DN607_RS05330 PF03979 Sigma-70 factor, region 1.1 DN607_RS05330 PF00140 Sigma-70 factor, region 1.2 DN607_RS05335 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DN607_RS05340 PF01784 NIF3 (NGG1p interacting factor 3) DN607_RS05345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN607_RS05345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN607_RS05345 PF02824 TGS domain DN607_RS05345 PF03129 Anticodon binding domain DN607_RS05355 PF13416 Bacterial extracellular solute-binding protein DN607_RS05360 PF00528 Binding-protein-dependent transport system inner membrane component DN607_RS05365 PF08402 TOBE domain DN607_RS05365 PF00005 ABC transporter DN607_RS05370 PF01264 Chorismate synthase DN607_RS05380 PF01702 Queuine tRNA-ribosyltransferase DN607_RS05390 PF00180 Isocitrate/isopropylmalate dehydrogenase DN607_RS05395 PF00920 Dehydratase family DN607_RS05400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN607_RS05400 PF00205 Thiamine pyrophosphate enzyme, central domain DN607_RS05400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN607_RS05405 PF00266 Aminotransferase class-V DN607_RS05410 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN607_RS05410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN607_RS05415 PF01522 Polysaccharide deacetylase DN607_RS05415 PF13739 Deacetylase PdaC DN607_RS05415 PF11738 Protein of unknown function (DUF3298) DN607_RS05420 PF01116 Fructose-bisphosphate aldolase class-II DN607_RS05425 PF14572 Phosphoribosyl synthetase-associated domain DN607_RS05425 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DN607_RS05430 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DN607_RS05430 PF01926 50S ribosome-binding GTPase DN607_RS05435 PF02660 Glycerol-3-phosphate acyltransferase DN607_RS05440 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DN607_RS05440 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DN607_RS05445 PF09547 Stage IV sporulation protein A (spore_IV_A) DN607_RS05460 PF00750 tRNA synthetases class I (R) DN607_RS05460 PF05746 DALR anticodon binding domain DN607_RS05460 PF03485 Arginyl tRNA synthetase N terminal domain DN607_RS05465 PF02272 DHHA1 domain DN607_RS05465 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN607_RS05465 PF01411 tRNA synthetases class II (A) DN607_RS05470 PF02517 CPBP intramembrane metalloprotease DN607_RS05480 PF00310 Glutamine amidotransferases class-II DN607_RS05480 PF04898 Glutamate synthase central domain DN607_RS05480 PF01645 Conserved region in glutamate synthase DN607_RS05480 PF01493 GXGXG motif DN607_RS05485 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN607_RS05485 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DN607_RS05490 PF08239 Bacterial SH3 domain DN607_RS05490 PF00877 NlpC/P60 family DN607_RS05490 PF01476 LysM domain DN607_RS05500 PF00318 Ribosomal protein S2 DN607_RS05505 PF00889 Elongation factor TS DN607_RS05525 PF13614 AAA domain DN607_RS05530 PF17762 HTH domain found in ParB protein DN607_RS05530 PF02195 ParB-like nuclease domain DN607_RS05550 PF04002 RadC-like JAB domain DN607_RS05575 PF00905 Penicillin binding protein transpeptidase domain DN607_RS05575 PF03717 Penicillin-binding Protein dimerisation domain DN607_RS05575 PF05223 NTF2-like N-terminal transpeptidase domain DN607_RS05595 PF05569 BlaR1 peptidase M56 DN607_RS05595 PF00905 Penicillin binding protein transpeptidase domain DN607_RS05600 PF03965 Penicillinase repressor DN607_RS05605 PF00486 Transcriptional regulatory protein, C terminal DN607_RS05605 PF00072 Response regulator receiver domain DN607_RS05610 PF00589 Phage integrase family DN607_RS05610 PF14659 Phage integrase, N-terminal SAM-like domain DN607_RS05630 PF01717 Cobalamin-independent synthase, Catalytic domain DN607_RS05635 PF02386 Cation transport protein DN607_RS05640 PF02254 TrkA-N domain DN607_RS05640 PF02080 TrkA-C domain DN607_RS05645 PF04321 RmlD substrate binding domain DN607_RS05650 PF00375 Sodium:dicarboxylate symporter family DN607_RS05655 PF01048 Phosphorylase superfamily DN607_RS05665 PF00075 RNase H DN607_RS05675 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain DN607_RS05675 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain DN607_RS05680 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DN607_RS05680 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DN607_RS05685 PF00800 Prephenate dehydratase DN607_RS05685 PF01817 Chorismate mutase type II DN607_RS05695 PF05670 NFACT protein RNA binding domain DN607_RS05700 PF03755 YicC-like family, N-terminal region DN607_RS05700 PF08340 Domain of unknown function (DUF1732) DN607_RS05705 PF00625 Guanylate kinase DN607_RS05710 PF01192 RNA polymerase Rpb6 DN607_RS05715 PF04055 Radical SAM superfamily DN607_RS05715 PF18693 TRAM domain DN607_RS05715 PF00919 Uncharacterized protein family UPF0004 DN607_RS05720 PF01066 CDP-alcohol phosphatidyltransferase DN607_RS05725 PF02464 Competence-damaged protein DN607_RS05725 PF18146 Damage-inducible protein CinA KH domain DN607_RS05725 PF00994 Probable molybdopterin binding domain DN607_RS05750 PF00958 GMP synthase C terminal domain DN607_RS05750 PF00117 Glutamine amidotransferase class-I DN607_RS05750 PF03352 Methyladenine glycosylase DN607_RS05750 PF13302 Acetyltransferase (GNAT) domain DN607_RS05750 PF13673 Acetyltransferase (GNAT) domain DN607_RS05775 PF16363 GDP-mannose 4,6 dehydratase DN607_RS05780 PF10369 Small subunit of acetolactate synthase DN607_RS05785 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DN607_RS05785 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DN607_RS05790 PF01649 Ribosomal protein S20 DN607_RS05795 PF03418 Germination protease DN607_RS05835 PF00145 C-5 cytosine-specific DNA methylase DN607_RS05855 PF02773 S-adenosylmethionine synthetase, C-terminal domain DN607_RS05855 PF02772 S-adenosylmethionine synthetase, central domain DN607_RS05855 PF00438 S-adenosylmethionine synthetase, N-terminal domain DN607_RS05870 PF01555 DNA methylase DN607_RS05950 PF08924 Domain of unknown function (DUF1906) DN607_RS05950 PF01471 Putative peptidoglycan binding domain DN607_RS05980 PF03050 Transposase IS66 family DN607_RS05980 PF13817 IS66 C-terminal element DN607_RS05980 PF13007 Transposase C of IS166 homeodomain DN607_RS05980 PF13005 zinc-finger binding domain of transposase IS66 DN607_RS06005 PF13307 Helicase C-terminal domain DN607_RS06005 PF04851 Type III restriction enzyme, res subunit DN607_RS06005 PF04851 Type III restriction enzyme, res subunit DN607_RS06005 PF00929 Exonuclease DN607_RS06005 PF13307 Helicase C-terminal domain DN607_RS06005 PF00929 Exonuclease DN607_RS06010 PF02899 Phage integrase, N-terminal SAM-like domain DN607_RS06010 PF00589 Phage integrase family DN607_RS06035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS06035 PF00986 DNA gyrase B subunit, carboxyl terminus DN607_RS06035 PF01751 Toprim domain DN607_RS06035 PF00204 DNA gyrase B DN607_RS06040 PF00521 DNA gyrase/topoisomerase IV, subunit A DN607_RS06040 PF03989 DNA gyrase C-terminal domain, beta-propeller DN607_RS06045 PF02576 RimP N-terminal domain DN607_RS06045 PF17384 RimP C-terminal SH3 domain DN607_RS06050 PF13184 NusA-like KH domain DN607_RS06050 PF08529 NusA N-terminal domain DN607_RS06050 PF00575 S1 RNA binding domain DN607_RS06055 PF04296 Protein of unknown function (DUF448) DN607_RS06065 PF11987 Translation-initiation factor 2 DN607_RS06065 PF11987 Translation-initiation factor 2 DN607_RS06065 PF04760 Translation initiation factor IF-2, N-terminal region DN607_RS06065 PF00009 Elongation factor Tu GTP binding domain DN607_RS06065 PF04760 Translation initiation factor IF-2, N-terminal region DN607_RS06065 PF00009 Elongation factor Tu GTP binding domain DN607_RS06070 PF02033 Ribosome-binding factor A DN607_RS06075 PF02272 DHHA1 domain DN607_RS06075 PF01368 DHH family DN607_RS06080 PF16198 tRNA pseudouridylate synthase B C-terminal domain DN607_RS06080 PF01509 TruB family pseudouridylate synthase (N terminal domain) DN607_RS06085 PF06574 FAD synthetase DN607_RS06085 PF01687 Riboflavin kinase DN607_RS06095 PF00312 Ribosomal protein S15 DN607_RS06105 PF03725 3' exoribonuclease family, domain 2 DN607_RS06105 PF01138 3' exoribonuclease family, domain 1 DN607_RS06105 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DN607_RS06105 PF00013 KH domain DN607_RS06105 PF00575 S1 RNA binding domain DN607_RS06125 PF06686 Stage III sporulation protein AC/AD protein family DN607_RS06130 PF09546 Stage III sporulation protein AE (spore_III_AE) DN607_RS06150 PF00009 Elongation factor Tu GTP binding domain DN607_RS06150 PF03144 Elongation factor Tu domain 2 DN607_RS06150 PF16658 Class II release factor RF3, C-terminal domain DN607_RS06160 PF01029 NusB family DN607_RS06165 PF02601 Exonuclease VII, large subunit DN607_RS06165 PF13742 OB-fold nucleic acid binding domain DN607_RS06175 PF00348 Polyprenyl synthetase DN607_RS06180 PF02780 Transketolase, C-terminal domain DN607_RS06180 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DN607_RS06180 PF02779 Transketolase, pyrimidine binding domain DN607_RS06185 PF01728 FtsJ-like methyltransferase DN607_RS06185 PF01479 S4 domain DN607_RS06190 PF01513 ATP-NAD kinase DN607_RS06195 PF02863 Arginine repressor, C-terminal domain DN607_RS06195 PF01316 Arginine repressor, DNA binding domain DN607_RS06200 PF02463 RecF/RecN/SMC N terminal domain DN607_RS06205 PF17820 PDZ domain DN607_RS06205 PF05580 SpoIVB peptidase S55 DN607_RS06210 PF08769 Sporulation initiation factor Spo0A C terminal DN607_RS06210 PF00072 Response regulator receiver domain DN607_RS06215 PF08323 Starch synthase catalytic domain DN607_RS06215 PF00534 Glycosyl transferases group 1 DN607_RS06220 PF02219 Methylenetetrahydrofolate reductase DN607_RS06230 PF02607 B12 binding domain DN607_RS06230 PF00809 Pterin binding enzyme DN607_RS06230 PF02965 Vitamin B12 dependent methionine synthase, activation domain DN607_RS06230 PF02574 Homocysteine S-methyltransferase DN607_RS06230 PF02310 B12 binding domain DN607_RS06240 PF01411 tRNA synthetases class II (A) DN607_RS06240 PF02272 DHHA1 domain DN607_RS06240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN607_RS06245 PF01165 Ribosomal protein S21 DN607_RS06255 PF00589 Phage integrase family DN607_RS06255 PF02920 DNA binding domain of tn916 integrase DN607_RS06260 PF09035 Excisionase from transposon Tn916 DN607_RS06275 PF16403 Domain of unknown function (DUF5011) DN607_RS06285 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DN607_RS06285 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DN607_RS06295 PF00768 D-alanyl-D-alanine carboxypeptidase DN607_RS06295 PF07943 Penicillin-binding protein 5, C-terminal domain DN607_RS06300 PF01791 DeoC/LacD family aldolase DN607_RS06305 PF00149 Calcineurin-like phosphoesterase DN607_RS06310 PF02616 Segregation and condensation protein ScpA DN607_RS06315 PF04079 Segregation and condensation complex subunit ScpB DN607_RS06320 PF00768 D-alanyl-D-alanine carboxypeptidase DN607_RS06320 PF07943 Penicillin-binding protein 5, C-terminal domain DN607_RS06325 PF00682 HMGL-like DN607_RS06325 PF08502 LeuA allosteric (dimerisation) domain DN607_RS06330 PF01039 Carboxyl transferase domain DN607_RS06345 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DN607_RS06350 PF00364 Biotin-requiring enzyme DN607_RS06350 PF02436 Conserved carboxylase domain DN607_RS06350 PF00682 HMGL-like DN607_RS06360 PF01418 Helix-turn-helix domain, rpiR family DN607_RS06360 PF01380 SIS domain DN607_RS06370 PF02224 Cytidylate kinase DN607_RS06375 PF02401 LytB protein DN607_RS06380 PF00575 S1 RNA binding domain DN607_RS06380 PF02401 LytB protein DN607_RS06385 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DN607_RS06385 PF10531 SLBB domain DN607_RS06385 PF13375 RnfC Barrel sandwich hybrid domain DN607_RS06385 PF13237 4Fe-4S dicluster domain DN607_RS06390 PF03116 NQR2, RnfD, RnfE family DN607_RS06395 PF04205 FMN-binding domain DN607_RS06400 PF02508 Rnf-Nqr subunit, membrane protein DN607_RS06405 PF02508 Rnf-Nqr subunit, membrane protein DN607_RS06410 PF04060 Putative Fe-S cluster DN607_RS06420 PF02424 ApbE family DN607_RS06435 PF01330 RuvA N terminal domain DN607_RS06435 PF07499 RuvA, C-terminal domain DN607_RS06440 PF05491 RuvB C-terminal winged helix domain DN607_RS06440 PF17864 RuvB AAA lid domain DN607_RS06440 PF05496 Holliday junction DNA helicase RuvB P-loop domain DN607_RS06450 PF12392 Collagenase DN607_RS06450 PF01136 Peptidase family U32 DN607_RS06455 PF01098 Cell cycle protein DN607_RS06460 PF00905 Penicillin binding protein transpeptidase domain DN607_RS06480 PF00830 Ribosomal L28 family DN607_RS06490 PF02734 DAK2 domain DN607_RS06490 PF13684 Dihydroxyacetone kinase family DN607_RS06495 PF00270 DEAD/DEAH box helicase DN607_RS06495 PF17191 RecG wedge domain DN607_RS06495 PF00271 Helicase conserved C-terminal domain DN607_RS06510 PF04294 VanW like protein DN607_RS06515 PF00188 Cysteine-rich secretory protein family DN607_RS06520 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN607_RS06530 PF01467 Cytidylyltransferase-like DN607_RS06545 PF07687 Peptidase dimerisation domain DN607_RS06545 PF01546 Peptidase family M20/M25/M40 DN607_RS06550 PF01551 Peptidase family M23 DN607_RS06555 PF01189 16S rRNA methyltransferase RsmB/F DN607_RS06555 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DN607_RS06555 PF17126 RsmF rRNA methyltransferase first C-terminal domain DN607_RS06560 PF01479 S4 domain DN607_RS06560 PF00849 RNA pseudouridylate synthase DN607_RS06565 PF13419 Haloacid dehalogenase-like hydrolase DN607_RS06570 PF11842 Domain of unknown function (DUF3362) DN607_RS06570 PF08497 Radical SAM N-terminal DN607_RS06570 PF04055 Radical SAM superfamily DN607_RS06575 PF00106 short chain dehydrogenase DN607_RS06585 PF00849 RNA pseudouridylate synthase DN607_RS06590 PF03838 Recombination protein U DN607_RS06595 PF13393 Histidyl-tRNA synthetase DN607_RS06600 PF01634 ATP phosphoribosyltransferase DN607_RS06605 PF00815 Histidinol dehydrogenase DN607_RS06610 PF00475 Imidazoleglycerol-phosphate dehydratase DN607_RS06615 PF01502 Phosphoribosyl-AMP cyclohydrolase DN607_RS06615 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DN607_RS06650 PF00005 ABC transporter DN607_RS06670 PF00575 S1 RNA binding domain DN607_RS06670 PF10150 Ribonuclease E/G family DN607_RS06675 PF04073 Aminoacyl-tRNA editing domain DN607_RS06685 PF00696 Amino acid kinase family DN607_RS06685 PF13840 ACT domain DN607_RS06690 PF00571 CBS domain DN607_RS06690 PF00005 ABC transporter DN607_RS06695 PF00829 Ribosomal prokaryotic L21 protein DN607_RS06705 PF01016 Ribosomal L27 protein DN607_RS06710 PF09269 Domain of unknown function (DUF1967) DN607_RS06710 PF01018 GTP1/OBG DN607_RS06710 PF01926 50S ribosome-binding GTPase DN607_RS06715 PF01985 CRS1 / YhbY (CRM) domain DN607_RS06720 PF01467 Cytidylyltransferase-like DN607_RS06725 PF01966 HD domain DN607_RS06735 PF13458 Periplasmic binding protein DN607_RS06740 PF02653 Branched-chain amino acid transport system / permease component DN607_RS06745 PF11862 Domain of unknown function (DUF3382) DN607_RS06745 PF02653 Branched-chain amino acid transport system / permease component DN607_RS06750 PF00005 ABC transporter DN607_RS06750 PF12399 Branched-chain amino acid ATP-binding cassette transporter DN607_RS06755 PF00005 ABC transporter DN607_RS06765 PF00108 Thiolase, N-terminal domain DN607_RS06765 PF02803 Thiolase, C-terminal domain DN607_RS06770 PF00378 Enoyl-CoA hydratase/isomerase DN607_RS06775 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DN607_RS06775 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DN607_RS06780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN607_RS06780 PF02770 Acyl-CoA dehydrogenase, middle domain DN607_RS06780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN607_RS06785 PF01012 Electron transfer flavoprotein domain DN607_RS06790 PF00766 Electron transfer flavoprotein FAD-binding domain DN607_RS06790 PF01012 Electron transfer flavoprotein domain DN607_RS06800 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DN607_RS06800 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DN607_RS06805 PF00717 Peptidase S24-like DN607_RS06805 PF01726 LexA DNA binding domain DN607_RS06815 PF02899 Phage integrase, N-terminal SAM-like domain DN607_RS06815 PF00589 Phage integrase family DN607_RS06820 PF02580 D-Tyr-tRNA(Tyr) deacylase DN607_RS06830 PF01479 S4 domain DN607_RS06830 PF00849 RNA pseudouridylate synthase DN607_RS06835 PF01252 Signal peptidase (SPase) II DN607_RS06840 PF00163 Ribosomal protein S4/S9 N-terminal domain DN607_RS06840 PF01479 S4 domain DN607_RS06845 PF04472 Cell division protein SepF DN607_RS06850 PF01168 Alanine racemase, N-terminal domain DN607_RS06865 PF00768 D-alanyl-D-alanine carboxypeptidase DN607_RS06865 PF07943 Penicillin-binding protein 5, C-terminal domain DN607_RS06870 PF02142 MGS-like domain DN607_RS06875 PF01098 Cell cycle protein DN607_RS06880 PF03776 Septum formation topological specificity factor MinE DN607_RS06885 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DN607_RS06890 PF03775 Septum formation inhibitor MinC, C-terminal domain DN607_RS06895 PF03717 Penicillin-binding Protein dimerisation domain DN607_RS06895 PF00905 Penicillin binding protein transpeptidase domain DN607_RS06895 PF00905 Penicillin binding protein transpeptidase domain DN607_RS06895 PF03717 Penicillin-binding Protein dimerisation domain DN607_RS06915 PF04002 RadC-like JAB domain DN607_RS06935 PF06838 Methionine gamma-lyase DN607_RS06945 PF08676 MutL C terminal dimerisation domain DN607_RS06945 PF01119 DNA mismatch repair protein, C-terminal domain DN607_RS06950 PF00488 MutS domain V DN607_RS06950 PF01624 MutS domain I DN607_RS06950 PF05188 MutS domain II DN607_RS06950 PF05190 MutS family domain IV DN607_RS06950 PF05192 MutS domain III DN607_RS06960 PF04055 Radical SAM superfamily DN607_RS06960 PF00919 Uncharacterized protein family UPF0004 DN607_RS06960 PF01938 TRAM domain DN607_RS06970 PF01812 5-formyltetrahydrofolate cyclo-ligase family DN607_RS06975 PF05979 Bacterial protein of unknown function (DUF896) DN607_RS07000 PF02130 Uncharacterized protein family UPF0054 DN607_RS07005 PF02562 PhoH-like protein DN607_RS07015 PF07873 YabP family DN607_RS07020 PF13344 Haloacid dehalogenase-like hydrolase DN607_RS07025 PF13685 Iron-containing alcohol dehydrogenase DN607_RS07030 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN607_RS07030 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN607_RS07035 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain DN607_RS07035 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain DN607_RS07040 PF04198 Putative sugar-binding domain DN607_RS07045 PF01207 Dihydrouridine synthase (Dus) DN607_RS07065 PF02590 Predicted SPOUT methyltransferase DN607_RS07070 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DN607_RS07070 PF13247 4Fe-4S dicluster domain DN607_RS07070 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN607_RS07075 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DN607_RS07075 PF00175 Oxidoreductase NAD-binding domain DN607_RS07080 PF00465 Iron-containing alcohol dehydrogenase DN607_RS07090 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DN607_RS07090 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DN607_RS07095 PF01268 Formate--tetrahydrofolate ligase DN607_RS07100 PF01580 FtsK/SpoIIIE family DN607_RS07100 PF17854 FtsK alpha domain DN607_RS07100 PF09397 Ftsk gamma domain DN607_RS07105 PF00574 Clp protease DN607_RS07110 PF01053 Cys/Met metabolism PLP-dependent enzyme DN607_RS07120 PF01709 Transcriptional regulator DN607_RS07125 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DN607_RS07130 PF00842 Alanine racemase, C-terminal domain DN607_RS07130 PF01168 Alanine racemase, N-terminal domain DN607_RS07135 PF03853 YjeF-related protein N-terminus DN607_RS07135 PF01256 Carbohydrate kinase DN607_RS07140 PF02629 CoA binding domain DN607_RS07140 PF06971 Putative DNA-binding protein N-terminus DN607_RS07145 PF12848 ABC transporter DN607_RS07145 PF16326 ABC transporter C-terminal domain DN607_RS07145 PF00005 ABC transporter DN607_RS07150 PF00180 Isocitrate/isopropylmalate dehydrogenase DN607_RS07155 PF00392 Bacterial regulatory proteins, gntR family DN607_RS07155 PF07729 FCD domain DN607_RS07160 PF00682 HMGL-like DN607_RS07170 PF13291 ACT domain DN607_RS07170 PF00291 Pyridoxal-phosphate dependent enzyme DN607_RS07175 PF00448 SRP54-type protein, GTPase domain DN607_RS07175 PF02881 SRP54-type protein, helical bundle domain DN607_RS07180 PF06470 SMC proteins Flexible Hinge Domain DN607_RS07180 PF02463 RecF/RecN/SMC N terminal domain DN607_RS07185 PF00035 Double-stranded RNA binding motif DN607_RS07185 PF14622 Ribonuclease-III-like DN607_RS07190 PF00550 Phosphopantetheine attachment site DN607_RS07195 PF02504 Fatty acid synthesis protein DN607_RS07200 PF01783 Ribosomal L32p protein family DN607_RS07210 PF00871 Acetokinase family DN607_RS07215 PF05636 HIGH Nucleotidyl Transferase DN607_RS07220 PF02645 Uncharacterised protein, DegV family COG1307 DN607_RS07225 PF05167 Uncharacterised ACR (DUF711) DN607_RS07235 PF00753 Metallo-beta-lactamase superfamily DN607_RS07240 PF01121 Dephospho-CoA kinase DN607_RS07245 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DN607_RS07245 PF01367 5'-3' exonuclease, C-terminal SAM fold DN607_RS07245 PF00476 DNA polymerase family A DN607_RS07250 PF00290 Tryptophan synthase alpha chain DN607_RS07255 PF00291 Pyridoxal-phosphate dependent enzyme DN607_RS07260 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DN607_RS07265 PF00218 Indole-3-glycerol phosphate synthase DN607_RS07270 PF02885 Glycosyl transferase family, helical bundle domain DN607_RS07270 PF00591 Glycosyl transferase family, a/b domain DN607_RS07275 PF02885 Glycosyl transferase family, helical bundle domain DN607_RS07275 PF00117 Glutamine amidotransferase class-I DN607_RS07275 PF00591 Glycosyl transferase family, a/b domain DN607_RS07280 PF00425 chorismate binding enzyme DN607_RS07280 PF04715 Anthranilate synthase component I, N terminal region DN607_RS07285 PF03960 ArsC family DN607_RS07295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN607_RS07295 PF03466 LysR substrate binding domain DN607_RS07305 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DN607_RS07305 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DN607_RS07310 PF00391 PEP-utilising enzyme, mobile domain DN607_RS07310 PF02887 Pyruvate kinase, alpha/beta domain DN607_RS07310 PF00224 Pyruvate kinase, barrel domain DN607_RS07325 PF01515 Phosphate acetyl/butaryl transferase DN607_RS07330 PF13419 Haloacid dehalogenase-like hydrolase DN607_RS07335 PF03449 Transcription elongation factor, N-terminal DN607_RS07335 PF01272 Transcription elongation factor, GreA/GreB, C-term DN607_RS07340 PF01676 Metalloenzyme superfamily DN607_RS07340 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DN607_RS07345 PF00300 Histidine phosphatase superfamily (branch 1) DN607_RS07350 PF00121 Triosephosphate isomerase DN607_RS07355 PF00162 Phosphoglycerate kinase DN607_RS07360 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DN607_RS07360 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DN607_RS07375 PF01592 NifU-like N terminal domain DN607_RS07380 PF00266 Aminotransferase class-V DN607_RS07385 PF02082 Transcriptional regulator DN607_RS07400 PF00293 NUDIX domain DN607_RS07405 PF12897 Alanine-glyoxylate amino-transferase DN607_RS07410 PF00013 KH domain DN607_RS07410 PF01966 HD domain DN607_RS07410 PF12072 Domain of unknown function (DUF3552) DN607_RS07420 PF00154 recA bacterial DNA recombination protein DN607_RS07425 PF02142 MGS-like domain DN607_RS07430 PF14602 Hexapeptide repeat of succinyl-transferase DN607_RS07430 PF00132 Bacterial transferase hexapeptide (six repeats) DN607_RS07430 PF12804 MobA-like NTP transferase domain DN607_RS07435 PF01131 DNA topoisomerase DN607_RS07435 PF01751 Toprim domain DN607_RS07440 PF17941 Polyphosphate kinase C-terminal domain 1 DN607_RS07440 PF13090 Polyphosphate kinase C-terminal domain 2 DN607_RS07440 PF02503 Polyphosphate kinase middle domain DN607_RS07440 PF13089 Polyphosphate kinase N-terminal domain DN607_RS07445 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN607_RS07445 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN607_RS07450 PF00206 Lyase DN607_RS07450 PF14698 Argininosuccinate lyase C-terminal DN607_RS07455 PF02677 Epoxyqueuosine reductase QueH DN607_RS07460 PF00005 ABC transporter DN607_RS07465 PF00528 Binding-protein-dependent transport system inner membrane component DN607_RS07470 PF05525 Branched-chain amino acid transport protein DN607_RS07475 PF13476 AAA domain DN607_RS07480 PF12320 Type 5 capsule protein repressor C-terminal domain DN607_RS07480 PF00149 Calcineurin-like phosphoesterase DN607_RS07490 PF05552 Conserved TM helix DN607_RS07490 PF00924 Mechanosensitive ion channel DN607_RS07495 PF02578 Multi-copper polyphenol oxidoreductase laccase DN607_RS07500 PF02021 Uncharacterised protein family UPF0102 DN607_RS07505 PF01351 Ribonuclease HII DN607_RS07510 PF10502 Signal peptidase, peptidase S26 DN607_RS07515 PF01926 50S ribosome-binding GTPase DN607_RS07520 PF10502 Signal peptidase, peptidase S26 DN607_RS07525 PF01245 Ribosomal protein L19 DN607_RS07530 PF01746 tRNA (Guanine-1)-methyltransferase DN607_RS07535 PF05239 PRC-barrel domain DN607_RS07535 PF01782 RimM N-terminal domain DN607_RS07545 PF00886 Ribosomal protein S16 DN607_RS07550 PF00448 SRP54-type protein, GTPase domain DN607_RS07550 PF02881 SRP54-type protein, helical bundle domain DN607_RS07550 PF02978 Signal peptide binding domain DN607_RS07555 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DN607_RS07560 PF00082 Subtilase family DN607_RS07565 PF01556 DnaJ C terminal domain DN607_RS07565 PF00226 DnaJ domain DN607_RS07565 PF00684 DnaJ central domain DN607_RS07580 PF01416 tRNA pseudouridine synthase DN607_RS07590 PF12848 ABC transporter DN607_RS07590 PF00005 ABC transporter DN607_RS07595 PF02664 S-Ribosylhomocysteinase (LuxS) DN607_RS07605 PF00128 Alpha amylase, catalytic domain DN607_RS07605 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DN607_RS07610 PF13407 Periplasmic binding protein domain DN607_RS07620 PF00580 UvrD/REP helicase N-terminal domain DN607_RS07620 PF13361 UvrD-like helicase C-terminal domain DN607_RS07625 PF00749 tRNA synthetases class I (E and Q), catalytic domain DN607_RS07650 PF00005 ABC transporter DN607_RS07655 PF00528 Binding-protein-dependent transport system inner membrane component DN607_RS07665 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN607_RS07685 PF00155 Aminotransferase class I and II DN607_RS07700 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DN607_RS07700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN607_RS07700 PF02142 MGS-like domain DN607_RS07705 PF00117 Glutamine amidotransferase class-I DN607_RS07705 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DN607_RS07710 PF01471 Putative peptidoglycan binding domain DN607_RS07710 PF01510 N-acetylmuramoyl-L-alanine amidase DN607_RS07715 PF02702 Osmosensitive K+ channel His kinase sensor domain DN607_RS07715 PF13493 Domain of unknown function (DUF4118) DN607_RS07715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS07715 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS07720 PF00486 Transcriptional regulatory protein, C terminal DN607_RS07720 PF00072 Response regulator receiver domain DN607_RS07725 PF02163 Peptidase family M50 DN607_RS07725 PF17820 PDZ domain DN607_RS07730 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DN607_RS07730 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DN607_RS07730 PF13288 DXP reductoisomerase C-terminal domain DN607_RS07740 PF01255 Putative undecaprenyl diphosphate synthase DN607_RS07745 PF01765 Ribosome recycling factor DN607_RS07750 PF00696 Amino acid kinase family DN607_RS07755 PF00793 DAHP synthetase I family DN607_RS07755 PF18152 DAHP synthase ferredoxin-like domain DN607_RS07760 PF01761 3-dehydroquinate synthase DN607_RS07765 PF01488 Shikimate / quinate 5-dehydrogenase DN607_RS07765 PF08501 Shikimate dehydrogenase substrate binding domain DN607_RS07775 PF01964 Radical SAM ThiC family DN607_RS07780 PF09586 Bacterial membrane protein YfhO DN607_RS07795 PF01510 N-acetylmuramoyl-L-alanine amidase DN607_RS07795 PF01471 Putative peptidoglycan binding domain DN607_RS07800 PF00571 CBS domain DN607_RS07800 PF00478 IMP dehydrogenase / GMP reductase domain DN607_RS07805 PF00118 TCP-1/cpn60 chaperonin family DN607_RS07810 PF00166 Chaperonin 10 Kd subunit DN607_RS07820 PF06018 CodY GAF-like domain DN607_RS07820 PF08222 CodY helix-turn-helix domain DN607_RS07825 PF01131 DNA topoisomerase DN607_RS07825 PF01751 Toprim domain DN607_RS07825 PF01396 Topoisomerase DNA binding C4 zinc finger DN607_RS07830 PF02481 DNA recombination-mediator protein A DN607_RS07830 PF17782 DprA winged helix domain DN607_RS07835 PF01078 Magnesium chelatase, subunit ChlI DN607_RS07835 PF13335 Magnesium chelatase, subunit ChlI C-terminal DN607_RS07840 PF04542 Sigma-70 region 2 DN607_RS07840 PF04545 Sigma-70, region 4 DN607_RS07845 PF01136 Peptidase family U32 DN607_RS07845 PF16325 Peptidase family U32 C-terminal domain DN607_RS07850 PF01596 O-methyltransferase DN607_RS07855 PF17770 Ribonuclease J C-terminal domain DN607_RS07855 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DN607_RS07855 PF00753 Metallo-beta-lactamase superfamily DN607_RS07860 PF01475 Ferric uptake regulator family DN607_RS07870 PF03652 Holliday junction resolvase DN607_RS07875 PF06135 IreB regulatory phosphoprotein DN607_RS07880 PF04055 Radical SAM superfamily DN607_RS07880 PF00919 Uncharacterized protein family UPF0004 DN607_RS07880 PF01938 TRAM domain DN607_RS07890 PF02568 Thiamine biosynthesis protein (ThiI) DN607_RS07890 PF02926 THUMP domain DN607_RS07895 PF00266 Aminotransferase class-V DN607_RS07900 PF04452 RNA methyltransferase DN607_RS07915 PF06962 Putative rRNA methylase DN607_RS07920 PF01261 Xylose isomerase-like TIM barrel DN607_RS07925 PF00483 Nucleotidyl transferase DN607_RS07930 PF00483 Nucleotidyl transferase DN607_RS07930 PF00132 Bacterial transferase hexapeptide (six repeats) DN607_RS07935 PF13187 4Fe-4S dicluster domain DN607_RS07935 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DN607_RS07935 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DN607_RS07945 PF04055 Radical SAM superfamily DN607_RS07950 PF01546 Peptidase family M20/M25/M40 DN607_RS07950 PF07687 Peptidase dimerisation domain DN607_RS07960 PF03169 OPT oligopeptide transporter protein DN607_RS07970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN607_RS07970 PF00672 HAMP domain DN607_RS07970 PF02743 Cache domain DN607_RS07980 PF01048 Phosphorylase superfamily DN607_RS07985 PF03952 Enolase, N-terminal domain DN607_RS07985 PF00113 Enolase, C-terminal TIM barrel domain DN607_RS07990 PF00465 Iron-containing alcohol dehydrogenase DN607_RS08000 PF01554 MatE DN607_RS08005 PF01022 Bacterial regulatory protein, arsR family DN607_RS08010 PF00403 Heavy-metal-associated domain DN607_RS08015 PF00403 Heavy-metal-associated domain DN607_RS08020 PF03466 LysR substrate binding domain DN607_RS08020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN607_RS08025 PF02417 Chromate transporter DN607_RS08040 PF04397 LytTr DNA-binding domain DN607_RS08040 PF00072 Response regulator receiver domain DN607_RS08060 PF00209 Sodium:neurotransmitter symporter family DN607_RS08065 PF01638 HxlR-like helix-turn-helix DN607_RS08075 PF02378 Phosphotransferase system, EIIC DN607_RS08075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN607_RS08080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN607_RS08080 PF02378 Phosphotransferase system, EIIC DN607_RS08080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN607_RS08085 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN607_RS08085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN607_RS08085 PF02378 Phosphotransferase system, EIIC DN607_RS08110 PF00860 Permease family DN607_RS08120 PF08240 Alcohol dehydrogenase GroES-like domain DN607_RS08120 PF00107 Zinc-binding dehydrogenase DN607_RS08125 PF00664 ABC transporter transmembrane region DN607_RS08125 PF00005 ABC transporter DN607_RS08130 PF08021 Siderophore-interacting FAD-binding domain DN607_RS08130 PF00664 ABC transporter transmembrane region DN607_RS08130 PF04954 Siderophore-interacting protein DN607_RS08130 PF00005 ABC transporter DN607_RS08135 PF00005 ABC transporter DN607_RS08155 PF00301 Rubredoxin DN607_RS08180 PF04055 Radical SAM superfamily DN607_RS08180 PF06968 Biotin and Thiamin Synthesis associated domain DN607_RS08185 PF02632 BioY family DN607_RS08215 PF05958 tRNA (Uracil-5-)-methyltransferase DN607_RS08220 PF00793 DAHP synthetase I family DN607_RS08230 PF13361 UvrD-like helicase C-terminal domain DN607_RS08230 PF00580 UvrD/REP helicase N-terminal domain DN607_RS08235 PF00694 Aconitase C-terminal domain DN607_RS08240 PF00330 Aconitase family (aconitate hydratase) DN607_RS08245 PF00694 Aconitase C-terminal domain DN607_RS08250 PF00330 Aconitase family (aconitate hydratase) DN607_RS08260 PF00005 ABC transporter DN607_RS08260 PF00664 ABC transporter transmembrane region DN607_RS08265 PF00664 ABC transporter transmembrane region DN607_RS08265 PF00005 ABC transporter DN607_RS08280 PF01371 Trp repressor protein DN607_RS08285 PF02811 PHP domain DN607_RS08300 PF00209 Sodium:neurotransmitter symporter family DN607_RS08315 PF00300 Histidine phosphatase superfamily (branch 1) DN607_RS08325 PF03060 Nitronate monooxygenase DN607_RS08330 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DN607_RS08335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN607_RS08335 PF00289 Biotin carboxylase, N-terminal domain DN607_RS08335 PF02785 Biotin carboxylase C-terminal domain DN607_RS08340 PF07977 FabA-like domain DN607_RS08345 PF00364 Biotin-requiring enzyme DN607_RS08350 PF00109 Beta-ketoacyl synthase, N-terminal domain DN607_RS08350 PF02801 Beta-ketoacyl synthase, C-terminal domain DN607_RS08360 PF00698 Acyl transferase domain DN607_RS08365 PF03060 Nitronate monooxygenase DN607_RS08370 PF00550 Phosphopantetheine attachment site DN607_RS08375 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DN607_RS08375 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DN607_RS08390 PF03123 CAT RNA binding domain DN607_RS08390 PF00874 PRD domain DN607_RS08395 PF00367 phosphotransferase system, EIIB DN607_RS08395 PF02378 Phosphotransferase system, EIIC DN607_RS08395 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN607_RS08410 PF02625 XdhC and CoxI family DN607_RS08410 PF13478 XdhC Rossmann domain DN607_RS08420 PF01979 Amidohydrolase family DN607_RS08430 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DN607_RS08430 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DN607_RS08435 PF13419 Haloacid dehalogenase-like hydrolase DN607_RS08440 PF00111 2Fe-2S iron-sulfur cluster binding domain DN607_RS08440 PF01799 [2Fe-2S] binding domain DN607_RS08445 PF00941 FAD binding domain in molybdopterin dehydrogenase DN607_RS08445 PF03450 CO dehydrogenase flavoprotein C-terminal domain DN607_RS08450 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DN607_RS08450 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DN607_RS08455 PF01979 Amidohydrolase family DN607_RS08460 PF10609 NUBPL iron-transfer P-loop NTPase DN607_RS08465 PF00465 Iron-containing alcohol dehydrogenase DN607_RS08480 PF00005 ABC transporter DN607_RS08485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS08485 PF07730 Histidine kinase DN607_RS08490 PF00196 Bacterial regulatory proteins, luxR family DN607_RS08490 PF00072 Response regulator receiver domain DN607_RS08495 PF01556 DnaJ C terminal domain DN607_RS08495 PF00684 DnaJ central domain DN607_RS08495 PF00226 DnaJ domain DN607_RS08500 PF00012 Hsp70 protein DN607_RS08505 PF01025 GrpE DN607_RS08510 PF01628 HrcA protein C terminal domain DN607_RS08515 PF04055 Radical SAM superfamily DN607_RS08515 PF06969 HemN C-terminal domain DN607_RS08520 PF03144 Elongation factor Tu domain 2 DN607_RS08520 PF00679 Elongation factor G C-terminus DN607_RS08520 PF06421 GTP-binding protein LepA C-terminus DN607_RS08520 PF00009 Elongation factor Tu GTP binding domain DN607_RS08530 PF00248 Aldo/keto reductase family DN607_RS08535 PF00484 Carbonic anhydrase DN607_RS08545 PF00920 Dehydratase family DN607_RS08550 PF00300 Histidine phosphatase superfamily (branch 1) DN607_RS08555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN607_RS08555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN607_RS08565 PF00171 Aldehyde dehydrogenase family DN607_RS08570 PF16957 Malonate decarboxylase, alpha subunit, transporter DN607_RS08575 PF03466 LysR substrate binding domain DN607_RS08575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN607_RS08580 PF02906 Iron only hydrogenase large subunit, C-terminal domain DN607_RS08580 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DN607_RS08580 PF00037 4Fe-4S binding domain DN607_RS08580 PF02256 Iron hydrogenase small subunit DN607_RS08585 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN607_RS08585 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DN607_RS08590 PF00005 ABC transporter DN607_RS08595 PF02653 Branched-chain amino acid transport system / permease component DN607_RS08610 PF02595 Glycerate kinase family DN607_RS08615 PF13556 PucR C-terminal helix-turn-helix domain DN607_RS08615 PF05651 Putative sugar diacid recognition DN607_RS08615 PF17853 GGDEF-like domain DN607_RS08620 PF00753 Metallo-beta-lactamase superfamily DN607_RS08620 PF13567 Domain of unknown function (DUF4131) DN607_RS08620 PF03772 Competence protein DN607_RS08635 PF00589 Phage integrase family DN607_RS08665 PF04203 Sortase domain DN607_RS08680 PF09820 Predicted AAA-ATPase DN607_RS08680 PF08011 PD-(D/E)XK nuclease superfamily DN607_RS08690 PF00005 ABC transporter DN607_RS08700 PF04055 Radical SAM superfamily DN607_RS08700 PF06463 Molybdenum Cofactor Synthesis C DN607_RS08770 PF00989 PAS fold DN607_RS08770 PF18698 Histidine kinase sensor domain DN607_RS08770 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS08770 PF00672 HAMP domain DN607_RS08770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS08775 PF00486 Transcriptional regulatory protein, C terminal DN607_RS08775 PF00072 Response regulator receiver domain DN607_RS08790 PF00202 Aminotransferase class-III DN607_RS08795 PF00696 Amino acid kinase family DN607_RS08800 PF01960 ArgJ family DN607_RS08810 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN607_RS08810 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN607_RS08815 PF01554 MatE DN607_RS08820 PF00171 Aldehyde dehydrogenase family DN607_RS08825 PF01472 PUA domain DN607_RS08825 PF00696 Amino acid kinase family DN607_RS08830 PF00152 tRNA synthetases class II (D, K and N) DN607_RS08830 PF02938 GAD domain DN607_RS08830 PF01336 OB-fold nucleic acid binding domain DN607_RS08835 PF00474 Sodium:solute symporter family DN607_RS08845 PF00209 Sodium:neurotransmitter symporter family DN607_RS08850 PF08279 HTH domain DN607_RS08850 PF02829 3H domain DN607_RS08855 PF00764 Arginosuccinate synthase DN607_RS08860 PF00872 Transposase, Mutator family DN607_RS08865 PF01244 Membrane dipeptidase (Peptidase family M19) DN607_RS08870 PF07722 Peptidase C26 DN607_RS08880 PF02535 ZIP Zinc transporter DN607_RS08885 PF00293 NUDIX domain DN607_RS08890 PF00009 Elongation factor Tu GTP binding domain DN607_RS08890 PF03764 Elongation factor G, domain IV DN607_RS08890 PF14492 Elongation Factor G, domain II DN607_RS08890 PF00679 Elongation factor G C-terminus DN607_RS08900 PF08264 Anticodon-binding domain of tRNA DN607_RS08900 PF00133 tRNA synthetases class I (I, L, M and V) DN607_RS08900 PF09334 tRNA synthetases class I (M) DN607_RS08900 PF13603 Leucyl-tRNA synthetase, Domain 2 DN607_RS08915 PF00258 Flavodoxin DN607_RS08935 PF02386 Cation transport protein DN607_RS08940 PF02254 TrkA-N domain DN607_RS08940 PF02080 TrkA-C domain DN607_RS08950 PF14492 Elongation Factor G, domain II DN607_RS08950 PF03764 Elongation factor G, domain IV DN607_RS08950 PF00009 Elongation factor Tu GTP binding domain DN607_RS08950 PF00679 Elongation factor G C-terminus DN607_RS08950 PF03144 Elongation factor Tu domain 2 DN607_RS08960 PF02153 Prephenate dehydrogenase DN607_RS08965 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN607_RS08995 PF00437 Type II/IV secretion system protein DN607_RS09000 PF02152 Dihydroneopterin aldolase DN607_RS09000 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DN607_RS09005 PF00809 Pterin binding enzyme DN607_RS09015 PF01227 GTP cyclohydrolase I DN607_RS09020 PF08245 Mur ligase middle domain DN607_RS09020 PF02875 Mur ligase family, glutamate ligase domain DN607_RS09025 PF00795 Carbon-nitrogen hydrolase DN607_RS09030 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DN607_RS09030 PF02906 Iron only hydrogenase large subunit, C-terminal domain DN607_RS09030 PF02256 Iron hydrogenase small subunit DN607_RS09030 PF00037 4Fe-4S binding domain DN607_RS09035 PF00037 4Fe-4S binding domain DN607_RS09035 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DN607_RS09035 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DN607_RS09045 PF02547 Queuosine biosynthesis protein DN607_RS09050 PF03147 Ferredoxin-fold anticodon binding domain DN607_RS09050 PF01588 Putative tRNA binding domain DN607_RS09050 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DN607_RS09050 PF03484 tRNA synthetase B5 domain DN607_RS09050 PF03483 B3/4 domain DN607_RS09055 PF01409 tRNA synthetases class II core domain (F) DN607_RS09055 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DN607_RS09060 PF03631 Virulence factor BrkB DN607_RS09070 PF01293 Phosphoenolpyruvate carboxykinase DN607_RS09075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN607_RS09085 PF00291 Pyridoxal-phosphate dependent enzyme DN607_RS09095 PF02446 4-alpha-glucanotransferase DN607_RS09115 PF12706 Beta-lactamase superfamily domain DN607_RS09125 PF03553 Na+/H+ antiporter family DN607_RS09135 PF01871 AMMECR1 DN607_RS09135 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DN607_RS09140 PF18389 TrmO C-terminal domain DN607_RS09140 PF01980 tRNA-methyltransferase O DN607_RS09165 PF00005 ABC transporter DN607_RS09170 PF02583 Metal-sensitive transcriptional repressor DN607_RS09185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DN607_RS09185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN607_RS09190 PF00111 2Fe-2S iron-sulfur cluster binding domain DN607_RS09190 PF01799 [2Fe-2S] binding domain DN607_RS09200 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN607_RS09200 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DN607_RS09210 PF00860 Permease family DN607_RS09215 PF01979 Amidohydrolase family DN607_RS09220 PF00291 Pyridoxal-phosphate dependent enzyme DN607_RS09225 PF01546 Peptidase family M20/M25/M40 DN607_RS09225 PF07687 Peptidase dimerisation domain DN607_RS09230 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DN607_RS09230 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DN607_RS09235 PF00696 Amino acid kinase family DN607_RS09240 PF00144 Beta-lactamase DN607_RS09245 PF01381 Helix-turn-helix DN607_RS09255 PF13378 Enolase C-terminal domain-like DN607_RS09255 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DN607_RS09275 PF01209 ubiE/COQ5 methyltransferase family DN607_RS09295 PF00005 ABC transporter DN607_RS09295 PF02687 FtsX-like permease family DN607_RS09295 PF12704 MacB-like periplasmic core domain DN607_RS09310 PF13302 Acetyltransferase (GNAT) domain DN607_RS09310 PF00958 GMP synthase C terminal domain DN607_RS09310 PF03352 Methyladenine glycosylase DN607_RS09310 PF13673 Acetyltransferase (GNAT) domain DN607_RS09310 PF00117 Glutamine amidotransferase class-I DN607_RS09320 PF02661 Fic/DOC family DN607_RS09390 PF07969 Amidohydrolase family DN607_RS09395 PF01235 Sodium:alanine symporter family DN607_RS09410 PF00072 Response regulator receiver domain DN607_RS09410 PF00486 Transcriptional regulatory protein, C terminal DN607_RS09420 PF00391 PEP-utilising enzyme, mobile domain DN607_RS09420 PF02896 PEP-utilising enzyme, TIM barrel domain DN607_RS09420 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DN607_RS09425 PF03123 CAT RNA binding domain DN607_RS09425 PF00874 PRD domain DN607_RS09430 PF00232 Glycosyl hydrolase family 1 DN607_RS09435 PF02378 Phosphotransferase system, EIIC DN607_RS09435 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN607_RS09435 PF00367 phosphotransferase system, EIIB DN607_RS09440 PF02127 Aminopeptidase I zinc metalloprotease (M18) DN607_RS09445 PF03129 Anticodon binding domain DN607_RS09445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN607_RS09450 PF11967 Recombination protein O N terminal DN607_RS09450 PF02565 Recombination protein O C terminal DN607_RS09455 PF07650 KH domain DN607_RS09455 PF01926 50S ribosome-binding GTPase DN607_RS09460 PF05193 Peptidase M16 inactive domain DN607_RS09460 PF00675 Insulinase (Peptidase family M16) DN607_RS09460 PF08367 Peptidase M16C associated DN607_RS09465 PF02844 Phosphoribosylglycinamide synthetase, N domain DN607_RS09465 PF02843 Phosphoribosylglycinamide synthetase, C domain DN607_RS09465 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DN607_RS09470 PF00551 Formyl transferase DN607_RS09475 PF02769 AIR synthase related protein, C-terminal domain DN607_RS09475 PF00586 AIR synthase related protein, N-terminal domain DN607_RS09480 PF00731 AIR carboxylase DN607_RS09500 PF00156 Phosphoribosyl transferase domain DN607_RS09510 PF08361 MAATS-type transcriptional repressor, C-terminal region DN607_RS09510 PF00440 Bacterial regulatory proteins, tetR family DN607_RS09550 PF01554 MatE DN607_RS09555 PF02127 Aminopeptidase I zinc metalloprotease (M18) DN607_RS09560 PF01180 Dihydroorotate dehydrogenase DN607_RS09565 PF00175 Oxidoreductase NAD-binding domain DN607_RS09565 PF00970 Oxidoreductase FAD-binding domain DN607_RS09565 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DN607_RS09570 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DN607_RS09575 PF01979 Amidohydrolase family DN607_RS09580 PF17862 AAA+ lid domain DN607_RS09580 PF06480 FtsH Extracellular DN607_RS09580 PF01434 Peptidase family M41 DN607_RS09580 PF00004 ATPase family associated with various cellular activities (AAA) DN607_RS09595 PF03572 Peptidase family S41 DN607_RS09595 PF00595 PDZ domain DN607_RS09600 PF10145 Phage-related minor tail protein DN607_RS09600 PF01551 Peptidase family M23 DN607_RS09600 PF01464 Transglycosylase SLT domain DN607_RS09605 PF18075 FtsX extracellular domain DN607_RS09605 PF02687 FtsX-like permease family DN607_RS09610 PF00005 ABC transporter DN607_RS09615 PF13556 PucR C-terminal helix-turn-helix domain DN607_RS09615 PF17853 GGDEF-like domain DN607_RS09615 PF05651 Putative sugar diacid recognition DN607_RS09630 PF04024 PspC domain DN607_RS09650 PF02545 Maf-like protein DN607_RS09655 PF06961 Protein of unknown function (DUF1294) DN607_RS09660 PF00580 UvrD/REP helicase N-terminal domain DN607_RS09660 PF12705 PD-(D/E)XK nuclease superfamily DN607_RS09660 PF13361 UvrD-like helicase C-terminal domain DN607_RS09665 PF12705 PD-(D/E)XK nuclease superfamily DN607_RS09670 PF01678 Diaminopimelate epimerase DN607_RS09675 PF12833 Helix-turn-helix domain DN607_RS09680 PF00989 PAS fold DN607_RS09680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS09680 PF16736 Single Cache-like DN607_RS09680 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS09685 PF00072 Response regulator receiver domain DN607_RS09685 PF00486 Transcriptional regulatory protein, C terminal DN607_RS09690 PF01895 PhoU domain DN607_RS09695 PF00005 ABC transporter DN607_RS09700 PF00528 Binding-protein-dependent transport system inner membrane component DN607_RS09705 PF00528 Binding-protein-dependent transport system inner membrane component DN607_RS09720 PF00596 Class II Aldolase and Adducin N-terminal domain DN607_RS09725 PF02653 Branched-chain amino acid transport system / permease component DN607_RS09730 PF02653 Branched-chain amino acid transport system / permease component DN607_RS09735 PF00005 ABC transporter DN607_RS09740 PF01048 Phosphorylase superfamily DN607_RS09745 PF02608 ABC transporter substrate-binding protein PnrA-like DN607_RS09750 PF01008 Initiation factor 2 subunit family DN607_RS09760 PF08220 DeoR-like helix-turn-helix domain DN607_RS09760 PF00455 DeoR C terminal sensor domain DN607_RS09770 PF04607 Region found in RelA / SpoT proteins DN607_RS09775 PF12704 MacB-like periplasmic core domain DN607_RS09775 PF02687 FtsX-like permease family DN607_RS09785 PF12704 MacB-like periplasmic core domain DN607_RS09785 PF02687 FtsX-like permease family DN607_RS09785 PF00005 ABC transporter DN607_RS09790 PF02690 Na+/Pi-cotransporter DN607_RS09815 PF03062 MBOAT, membrane-bound O-acyltransferase family DN607_RS09835 PF00403 Heavy-metal-associated domain DN607_RS09855 PF12164 Stage V sporulation protein AA DN607_RS09860 PF04539 Sigma-70 region 3 DN607_RS09860 PF04542 Sigma-70 region 2 DN607_RS09860 PF04545 Sigma-70, region 4 DN607_RS09865 PF00239 Resolvase, N terminal domain DN607_RS09865 PF02796 Helix-turn-helix domain of resolvase DN607_RS09925 PF00717 Peptidase S24-like DN607_RS09925 PF01726 LexA DNA binding domain DN607_RS09930 PF11799 impB/mucB/samB family C-terminal domain DN607_RS09930 PF00817 impB/mucB/samB family DN607_RS09950 PF04237 YjbR DN607_RS09960 PF03432 Relaxase/Mobilisation nuclease domain DN607_RS09965 PF18698 Histidine kinase sensor domain DN607_RS09965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS09965 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS09965 PF00672 HAMP domain DN607_RS09990 PF00664 ABC transporter transmembrane region DN607_RS09990 PF00005 ABC transporter DN607_RS09995 PF00005 ABC transporter DN607_RS09995 PF08021 Siderophore-interacting FAD-binding domain DN607_RS09995 PF04954 Siderophore-interacting protein DN607_RS09995 PF00664 ABC transporter transmembrane region DN607_RS10000 PF00005 ABC transporter DN607_RS10015 PF00072 Response regulator receiver domain DN607_RS10015 PF07495 Y_Y_Y domain DN607_RS10015 PF07494 Two component regulator propeller DN607_RS10015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS10015 PF12833 Helix-turn-helix domain DN607_RS10015 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS10020 PF00668 Condensation domain DN607_RS10020 PF13193 AMP-binding enzyme C-terminal domain DN607_RS10020 PF00550 Phosphopantetheine attachment site DN607_RS10020 PF07993 Male sterility protein DN607_RS10020 PF00501 AMP-binding enzyme DN607_RS10030 PF00550 Phosphopantetheine attachment site DN607_RS10030 PF08242 Methyltransferase domain DN607_RS10030 PF00668 Condensation domain DN607_RS10030 PF00501 AMP-binding enzyme DN607_RS10035 PF08242 Methyltransferase domain DN607_RS10035 PF00501 AMP-binding enzyme DN607_RS10035 PF00550 Phosphopantetheine attachment site DN607_RS10035 PF00668 Condensation domain DN607_RS10040 PF00501 AMP-binding enzyme DN607_RS10040 PF13193 AMP-binding enzyme C-terminal domain DN607_RS10045 PF01648 4'-phosphopantetheinyl transferase superfamily DN607_RS10050 PF00975 Thioesterase domain DN607_RS10065 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN607_RS10065 PF00989 PAS fold DN607_RS10065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS10065 PF17203 Single cache domain 3 DN607_RS10070 PF04397 LytTr DNA-binding domain DN607_RS10070 PF00072 Response regulator receiver domain DN607_RS10095 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DN607_RS10115 PF01751 Toprim domain DN607_RS10115 PF01131 DNA topoisomerase DN607_RS10130 PF01476 LysM domain DN607_RS10130 PF08239 Bacterial SH3 domain DN607_RS10130 PF00877 NlpC/P60 family DN607_RS10165 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DN607_RS10185 PF01695 IstB-like ATP binding protein DN607_RS10220 PF02195 ParB-like nuclease domain DN607_RS10220 PF17762 HTH domain found in ParB protein DN607_RS10225 PF13614 AAA domain DN607_RS10240 PF13581 Histidine kinase-like ATPase domain DN607_RS10245 PF01740 STAS domain DN607_RS10260 PF00133 tRNA synthetases class I (I, L, M and V) DN607_RS10260 PF08264 Anticodon-binding domain of tRNA DN607_RS10260 PF10458 Valyl tRNA synthetase tRNA binding arm DN607_RS10265 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DN607_RS10270 PF17763 Glutaminase/Asparaginase C-terminal domain DN607_RS10270 PF00710 Asparaginase, N-terminal DN607_RS10295 PF01926 50S ribosome-binding GTPase DN607_RS10295 PF13167 GTP-binding GTPase N-terminal DN607_RS10295 PF16360 GTP-binding GTPase Middle Region DN607_RS10310 PF00403 Heavy-metal-associated domain DN607_RS10315 PF03167 Uracil DNA glycosylase superfamily DN607_RS10320 PF00977 Histidine biosynthesis protein DN607_RS10325 PF00117 Glutamine amidotransferase class-I DN607_RS10330 PF01048 Phosphorylase superfamily DN607_RS10335 PF00672 HAMP domain DN607_RS10335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS10335 PF18698 Histidine kinase sensor domain DN607_RS10335 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS10335 PF00989 PAS fold DN607_RS10340 PF00486 Transcriptional regulatory protein, C terminal DN607_RS10340 PF00072 Response regulator receiver domain DN607_RS10345 PF02687 FtsX-like permease family DN607_RS10345 PF12704 MacB-like periplasmic core domain DN607_RS10350 PF00005 ABC transporter DN607_RS10360 PF02608 ABC transporter substrate-binding protein PnrA-like DN607_RS10365 PF02653 Branched-chain amino acid transport system / permease component DN607_RS10375 PF00005 ABC transporter DN607_RS10390 PF04172 LrgB-like family DN607_RS10395 PF03788 LrgA family DN607_RS10405 PF11700 Vacuole effluxer Atg22 like DN607_RS10410 PF03480 Bacterial extracellular solute-binding protein, family 7 DN607_RS10415 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DN607_RS10415 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DN607_RS10425 PF01487 Type I 3-dehydroquinase DN607_RS10430 PF07690 Major Facilitator Superfamily DN607_RS10435 PF08501 Shikimate dehydrogenase substrate binding domain DN607_RS10435 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DN607_RS10440 PF03466 LysR substrate binding domain DN607_RS10440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN607_RS10445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN607_RS10445 PF03466 LysR substrate binding domain DN607_RS10450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DN607_RS10450 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN607_RS10455 PF01668 SmpB protein DN607_RS10460 PF08206 Ribonuclease B OB domain DN607_RS10460 PF00773 RNB domain DN607_RS10460 PF17876 Cold shock domain DN607_RS10460 PF00575 S1 RNA binding domain DN607_RS10485 PF00535 Glycosyl transferase family 2 DN607_RS10490 PF01471 Putative peptidoglycan binding domain DN607_RS10490 PF07486 Cell Wall Hydrolase DN607_RS10495 PF02080 TrkA-C domain DN607_RS10495 PF03471 Transporter associated domain DN607_RS10495 PF00999 Sodium/hydrogen exchanger family DN607_RS10500 PF12822 ECF transporter, substrate-specific component DN607_RS10505 PF17674 HHH domain DN607_RS10505 PF16921 Tex protein YqgF-like domain DN607_RS10505 PF00575 S1 RNA binding domain DN607_RS10505 PF09371 Tex-like protein N-terminal domain DN607_RS10515 PF00781 Diacylglycerol kinase catalytic domain DN607_RS10525 PF00708 Acylphosphatase DN607_RS10535 PF06968 Biotin and Thiamin Synthesis associated domain DN607_RS10535 PF04055 Radical SAM superfamily DN607_RS10545 PF10396 GTP-binding protein TrmE N-terminus DN607_RS10545 PF12631 MnmE helical domain DN607_RS10545 PF01926 50S ribosome-binding GTPase DN607_RS10550 PF03129 Anticodon binding domain DN607_RS10550 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN607_RS10550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN607_RS10550 PF02824 TGS domain DN607_RS10565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS10565 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS10570 PF00072 Response regulator receiver domain DN607_RS10570 PF00486 Transcriptional regulatory protein, C terminal DN607_RS10575 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN607_RS10575 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN607_RS10580 PF00293 NUDIX domain DN607_RS10580 PF09297 NADH pyrophosphatase zinc ribbon domain DN607_RS10595 PF02001 Protein of unknown function DUF134 DN607_RS10620 PF00027 Cyclic nucleotide-binding domain DN607_RS10620 PF13545 Crp-like helix-turn-helix domain DN607_RS10625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN607_RS10625 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN607_RS10630 PF00581 Rhodanese-like domain DN607_RS10635 PF00085 Thioredoxin DN607_RS10675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS10675 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS10725 PF03050 Transposase IS66 family DN607_RS10725 PF13817 IS66 C-terminal element DN607_RS10725 PF13007 Transposase C of IS166 homeodomain DN607_RS10725 PF13005 zinc-finger binding domain of transposase IS66 DN607_RS10735 PF00117 Glutamine amidotransferase class-I DN607_RS10735 PF02540 NAD synthase DN607_RS10735 PF00958 GMP synthase C terminal domain DN607_RS10740 PF01554 MatE DN607_RS10760 PF12116 Stage III sporulation protein D DN607_RS10780 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DN607_RS10780 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DN607_RS10780 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DN607_RS10780 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DN607_RS10785 PF01134 Glucose inhibited division protein A DN607_RS10785 PF13932 GidA associated domain DN607_RS10790 PF00982 Glycosyltransferase family 20 DN607_RS10790 PF05116 Sucrose-6F-phosphate phosphohydrolase DN607_RS10795 PF02502 Ribose/Galactose Isomerase DN607_RS10800 PF00480 ROK family DN607_RS10805 PF00834 Ribulose-phosphate 3 epimerase family DN607_RS10810 PF02653 Branched-chain amino acid transport system / permease component DN607_RS10815 PF00005 ABC transporter DN607_RS10820 PF13407 Periplasmic binding protein domain DN607_RS10825 PF00356 Bacterial regulatory proteins, lacI family DN607_RS10830 PF00923 Transaldolase/Fructose-6-phosphate aldolase DN607_RS10835 PF00834 Ribulose-phosphate 3 epimerase family DN607_RS10840 PF04055 Radical SAM superfamily DN607_RS10840 PF13187 4Fe-4S dicluster domain DN607_RS10845 PF02901 Pyruvate formate lyase-like DN607_RS10845 PF01228 Glycine radical DN607_RS10850 PF00480 ROK family DN607_RS10860 PF02653 Branched-chain amino acid transport system / permease component DN607_RS10865 PF00005 ABC transporter DN607_RS10870 PF13407 Periplasmic binding protein domain DN607_RS10885 PF00356 Bacterial regulatory proteins, lacI family DN607_RS10900 PF02920 DNA binding domain of tn916 integrase DN607_RS10900 PF00589 Phage integrase family DN607_RS10905 PF09035 Excisionase from transposon Tn916 DN607_RS10930 PF13407 Periplasmic binding protein domain DN607_RS10935 PF00356 Bacterial regulatory proteins, lacI family DN607_RS10940 PF00596 Class II Aldolase and Adducin N-terminal domain DN607_RS10955 PF03143 Elongation factor Tu C-terminal domain DN607_RS10955 PF03144 Elongation factor Tu domain 2 DN607_RS10955 PF00009 Elongation factor Tu GTP binding domain DN607_RS10960 PF03764 Elongation factor G, domain IV DN607_RS10960 PF14492 Elongation Factor G, domain II DN607_RS10960 PF00679 Elongation factor G C-terminus DN607_RS10960 PF03144 Elongation factor Tu domain 2 DN607_RS10960 PF00009 Elongation factor Tu GTP binding domain DN607_RS10965 PF00177 Ribosomal protein S7p/S5e DN607_RS10970 PF00164 Ribosomal protein S12/S23 DN607_RS10975 PF03547 Membrane transport protein DN607_RS10980 PF09180 Prolyl-tRNA synthetase, C-terminal DN607_RS10980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN607_RS10980 PF03129 Anticodon binding domain DN607_RS10990 PF05816 Toxic anion resistance protein (TelA) DN607_RS11000 PF00849 RNA pseudouridylate synthase DN607_RS11000 PF01479 S4 domain DN607_RS11005 PF04026 SpoVG DN607_RS11010 PF00483 Nucleotidyl transferase DN607_RS11010 PF00132 Bacterial transferase hexapeptide (six repeats) DN607_RS11015 PF00132 Bacterial transferase hexapeptide (six repeats) DN607_RS11015 PF00483 Nucleotidyl transferase DN607_RS11020 PF01225 Mur ligase family, catalytic domain DN607_RS11020 PF02875 Mur ligase family, glutamate ligase domain DN607_RS11020 PF08245 Mur ligase middle domain DN607_RS11035 PF14572 Phosphoribosyl synthetase-associated domain DN607_RS11035 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DN607_RS11045 PF04023 FeoA domain DN607_RS11045 PF07670 Nucleoside recognition DN607_RS11045 PF07664 Ferrous iron transport protein B C terminus DN607_RS11045 PF17910 FeoB cytosolic helical domain DN607_RS11045 PF02421 Ferrous iron transport protein B DN607_RS11060 PF01475 Ferric uptake regulator family DN607_RS11065 PF04998 RNA polymerase Rpb1, domain 5 DN607_RS11065 PF05000 RNA polymerase Rpb1, domain 4 DN607_RS11065 PF04983 RNA polymerase Rpb1, domain 3 DN607_RS11065 PF00623 RNA polymerase Rpb1, domain 2 DN607_RS11065 PF04997 RNA polymerase Rpb1, domain 1 DN607_RS11070 PF04563 RNA polymerase beta subunit DN607_RS11070 PF10385 RNA polymerase beta subunit external 1 domain DN607_RS11070 PF04560 RNA polymerase Rpb2, domain 7 DN607_RS11070 PF00562 RNA polymerase Rpb2, domain 6 DN607_RS11070 PF04565 RNA polymerase Rpb2, domain 3 DN607_RS11070 PF04561 RNA polymerase Rpb2, domain 2 DN607_RS11080 PF00005 ABC transporter DN607_RS11085 PF01032 FecCD transport family DN607_RS11100 PF03479 Plants and Prokaryotes Conserved (PCC) domain DN607_RS11100 PF12804 MobA-like NTP transferase domain DN607_RS11100 PF00132 Bacterial transferase hexapeptide (six repeats) DN607_RS11105 PF00082 Subtilase family DN607_RS11110 PF03458 UPF0126 domain DN607_RS11115 PF00542 Ribosomal protein L7/L12 C-terminal domain DN607_RS11115 PF16320 Ribosomal protein L7/L12 dimerisation domain DN607_RS11120 PF00466 Ribosomal protein L10 DN607_RS11125 PF00687 Ribosomal protein L1p/L10e family DN607_RS11130 PF00298 Ribosomal protein L11, RNA binding domain DN607_RS11130 PF03946 Ribosomal protein L11, N-terminal domain DN607_RS11135 PF02357 Transcription termination factor nusG DN607_RS11135 PF00467 KOW motif DN607_RS11145 PF00471 Ribosomal protein L33 DN607_RS11150 PF00005 ABC transporter DN607_RS11155 PF01032 FecCD transport family DN607_RS11165 PF06180 Cobalt chelatase (CbiK) DN607_RS11175 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DN607_RS11175 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DN607_RS11175 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DN607_RS11175 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DN607_RS11180 PF00209 Sodium:neurotransmitter symporter family DN607_RS11185 PF01171 PP-loop family DN607_RS11190 PF00899 ThiF family DN607_RS11195 PF00881 Nitroreductase family DN607_RS11200 PF01235 Sodium:alanine symporter family DN607_RS11205 PF07683 Cobalamin synthesis protein cobW C-terminal domain DN607_RS11205 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN607_RS11215 PF00011 Hsp20/alpha crystallin family DN607_RS11225 PF00690 Cation transporter/ATPase, N-terminus DN607_RS11225 PF00689 Cation transporting ATPase, C-terminus DN607_RS11240 PF00342 Phosphoglucose isomerase DN607_RS11320 PF00294 pfkB family carbohydrate kinase DN607_RS11320 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DN607_RS11335 PF00654 Voltage gated chloride channel DN607_RS11340 PF00293 NUDIX domain DN607_RS11345 PF01613 Flavin reductase like domain DN607_RS11355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DN607_RS11365 PF02645 Uncharacterised protein, DegV family COG1307 DN607_RS11370 PF14602 Hexapeptide repeat of succinyl-transferase DN607_RS11370 PF12464 Maltose acetyltransferase DN607_RS11380 PF01795 MraW methylase family DN607_RS11385 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DN607_RS11390 PF00294 pfkB family carbohydrate kinase DN607_RS11400 PF02690 Na+/Pi-cotransporter DN607_RS11415 PF16736 Single Cache-like DN607_RS11415 PF00989 PAS fold DN607_RS11415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS11415 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS11420 PF00486 Transcriptional regulatory protein, C terminal DN607_RS11420 PF00072 Response regulator receiver domain DN607_RS11425 PF08348 YheO-like PAS domain DN607_RS11425 PF13309 HTH domain DN607_RS11430 PF01042 Endoribonuclease L-PSP DN607_RS11440 PF02424 ApbE family DN607_RS11450 PF00005 ABC transporter DN607_RS11450 PF12848 ABC transporter DN607_RS11450 PF16326 ABC transporter C-terminal domain DN607_RS11455 PF00892 EamA-like transporter family DN607_RS11500 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS11500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS11510 PF00005 ABC transporter DN607_RS11515 PF00072 Response regulator receiver domain DN607_RS11515 PF00486 Transcriptional regulatory protein, C terminal DN607_RS11560 PF13411 MerR HTH family regulatory protein DN607_RS11575 PF07581 The GLUG motif DN607_RS11575 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) DN607_RS11605 PF06953 Arsenical resistance operon trans-acting repressor ArsD DN607_RS11610 PF01272 Transcription elongation factor, GreA/GreB, C-term DN607_RS11610 PF03449 Transcription elongation factor, N-terminal DN607_RS11615 PF00152 tRNA synthetases class II (D, K and N) DN607_RS11615 PF01336 OB-fold nucleic acid binding domain DN607_RS11620 PF03575 Peptidase family S51 DN607_RS11630 PF13411 MerR HTH family regulatory protein DN607_RS11630 PF06445 GyrI-like small molecule binding domain DN607_RS11655 PF00106 short chain dehydrogenase DN607_RS11660 PF01207 Dihydrouridine synthase (Dus) DN607_RS11665 PF03309 Type III pantothenate kinase DN607_RS11675 PF02237 Biotin protein ligase C terminal domain DN607_RS11675 PF03099 Biotin/lipoate A/B protein ligase family DN607_RS11675 PF08279 HTH domain DN607_RS11680 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DN607_RS11680 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DN607_RS11685 PF01145 SPFH domain / Band 7 family DN607_RS11695 PF00588 SpoU rRNA Methylase family DN607_RS11695 PF08032 RNA 2'-O ribose methyltransferase substrate binding DN607_RS11700 PF00486 Transcriptional regulatory protein, C terminal DN607_RS11700 PF00072 Response regulator receiver domain DN607_RS11705 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS11705 PF16736 Single Cache-like DN607_RS11705 PF00989 PAS fold DN607_RS11705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS11710 PF00438 S-adenosylmethionine synthetase, N-terminal domain DN607_RS11710 PF02773 S-adenosylmethionine synthetase, C-terminal domain DN607_RS11710 PF02772 S-adenosylmethionine synthetase, central domain DN607_RS11715 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN607_RS11720 PF01202 Shikimate kinase DN607_RS11730 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DN607_RS11730 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DN607_RS11735 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN607_RS11735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN607_RS11740 PF00231 ATP synthase DN607_RS11745 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN607_RS11745 PF00306 ATP synthase alpha/beta chain, C terminal domain DN607_RS11745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN607_RS11750 PF00213 ATP synthase delta (OSCP) subunit DN607_RS11755 PF00430 ATP synthase B/B' CF(0) DN607_RS11760 PF00137 ATP synthase subunit C DN607_RS11765 PF00119 ATP synthase A chain DN607_RS11780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN607_RS11780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN607_RS11790 PF04346 Ethanolamine utilisation protein, EutH DN607_RS11800 PF01266 FAD dependent oxidoreductase DN607_RS11805 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN607_RS11805 PF04324 BFD-like [2Fe-2S] binding domain DN607_RS11815 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DN607_RS11825 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN607_RS11825 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN607_RS11830 PF13344 Haloacid dehalogenase-like hydrolase DN607_RS11840 PF00588 SpoU rRNA Methylase family DN607_RS11845 PF00155 Aminotransferase class I and II DN607_RS11850 PF01037 Lrp/AsnC ligand binding domain DN607_RS11860 PF04294 VanW like protein DN607_RS11875 PF14437 MafB19-like deaminase DN607_RS11885 PF00909 Ammonium Transporter Family DN607_RS11895 PF01966 HD domain DN607_RS11895 PF13286 Phosphohydrolase-associated domain DN607_RS11900 PF00072 Response regulator receiver domain DN607_RS11905 PF02557 D-alanyl-D-alanine carboxypeptidase DN607_RS11910 PF00990 Diguanylate cyclase, GGDEF domain DN607_RS11925 PF18318 Glutamine synthetase C-terminal domain DN607_RS11925 PF00120 Glutamine synthetase, catalytic domain DN607_RS11925 PF12437 Glutamine synthetase type III N terminal DN607_RS11930 PF01116 Fructose-bisphosphate aldolase class-II DN607_RS11940 PF00781 Diacylglycerol kinase catalytic domain DN607_RS11945 PF00381 PTS HPr component phosphorylation site DN607_RS11950 PF10298 WhiA N-terminal LAGLIDADG-like domain DN607_RS11950 PF14527 WhiA LAGLIDADG-like domain DN607_RS11950 PF02650 WhiA C-terminal HTH domain DN607_RS11955 PF03668 P-loop ATPase protein family DN607_RS11960 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DN607_RS11960 PF01565 FAD binding domain DN607_RS11965 PF00571 CBS domain DN607_RS11965 PF03471 Transporter associated domain DN607_RS11965 PF01595 Cyclin M transmembrane N-terminal domain DN607_RS11980 PF05697 Bacterial trigger factor protein (TF) DN607_RS11980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DN607_RS11980 PF05698 Bacterial trigger factor protein (TF) C-terminus DN607_RS11985 PF13396 Phospholipase_D-nuclease N-terminal DN607_RS11985 PF13091 PLD-like domain DN607_RS12000 PF01177 Asp/Glu/Hydantoin racemase DN607_RS12005 PF00365 Phosphofructokinase DN607_RS12010 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN607_RS12010 PF14579 Helix-hairpin-helix motif DN607_RS12010 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN607_RS12010 PF02811 PHP domain DN607_RS12010 PF01336 OB-fold nucleic acid binding domain DN607_RS12020 PF13509 S1 domain DN607_RS12020 PF17783 CvfB-like winged helix domain DN607_RS12030 PF16916 Dimerisation domain of Zinc Transporter DN607_RS12030 PF01545 Cation efflux family DN607_RS12035 PF09551 Stage II sporulation protein R (spore_II_R) DN607_RS12040 PF07729 FCD domain DN607_RS12040 PF00392 Bacterial regulatory proteins, gntR family DN607_RS12045 PF08544 GHMP kinases C terminal DN607_RS12045 PF00288 GHMP kinases N terminal domain DN607_RS12050 PF01476 LysM domain DN607_RS12050 PF08239 Bacterial SH3 domain DN607_RS12050 PF00877 NlpC/P60 family DN607_RS12065 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DN607_RS12065 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DN607_RS12065 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DN607_RS12070 PF01820 D-ala D-ala ligase N-terminus DN607_RS12070 PF07478 D-ala D-ala ligase C-terminus DN607_RS12075 PF08245 Mur ligase middle domain DN607_RS12075 PF02875 Mur ligase family, glutamate ligase domain DN607_RS12075 PF01225 Mur ligase family, catalytic domain DN607_RS12085 PF00156 Phosphoribosyl transferase domain DN607_RS12090 PF01488 Shikimate / quinate 5-dehydrogenase DN607_RS12090 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DN607_RS12095 PF02570 Precorrin-8X methylmutase DN607_RS12100 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DN607_RS12110 PF07685 CobB/CobQ-like glutamine amidotransferase domain DN607_RS12115 PF00155 Aminotransferase class I and II DN607_RS12120 PF03186 CobD/Cbib protein DN607_RS12125 PF00300 Histidine phosphatase superfamily (branch 1) DN607_RS12130 PF02654 Cobalamin-5-phosphate synthase DN607_RS12135 PF02277 Phosphoribosyltransferase DN607_RS12140 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DN607_RS12140 PF07685 CobB/CobQ-like glutamine amidotransferase domain DN607_RS12145 PF05175 Methyltransferase small domain DN607_RS12150 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DN607_RS12150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN607_RS12155 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN607_RS12160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN607_RS12165 PF01888 CbiD DN607_RS12170 PF06180 Cobalt chelatase (CbiK) DN607_RS12175 PF11760 Cobalamin synthesis G N-terminal DN607_RS12175 PF01890 Cobalamin synthesis G C-terminus DN607_RS12175 PF11761 Cobalamin biosynthesis central region DN607_RS12185 PF00465 Iron-containing alcohol dehydrogenase DN607_RS12190 PF00171 Aldehyde dehydrogenase family DN607_RS12200 PF03591 AzlC protein DN607_RS12220 PF00072 Response regulator receiver domain DN607_RS12220 PF04397 LytTr DNA-binding domain DN607_RS12225 PF04073 Aminoacyl-tRNA editing domain DN607_RS12235 PF17755 UvrA DNA-binding domain DN607_RS12235 PF00005 ABC transporter DN607_RS12235 PF17760 UvrA interaction domain DN607_RS12240 PF01047 MarR family DN607_RS12250 PF00155 Aminotransferase class I and II DN607_RS12260 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN607_RS12260 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DN607_RS12265 PF01063 Amino-transferase class IV DN607_RS12275 PF03466 LysR substrate binding domain DN607_RS12275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN607_RS12280 PF00072 Response regulator receiver domain DN607_RS12290 PF02743 Cache domain DN607_RS12290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS12290 PF00672 HAMP domain DN607_RS12290 PF06580 Histidine kinase DN607_RS12295 PF10502 Signal peptidase, peptidase S26 DN607_RS12340 PF00482 Type II secretion system (T2SS), protein F DN607_RS12365 PF00437 Type II/IV secretion system protein DN607_RS12375 PF16403 Domain of unknown function (DUF5011) DN607_RS12380 PF03176 MMPL family DN607_RS12385 PF01116 Fructose-bisphosphate aldolase class-II DN607_RS12390 PF13817 IS66 C-terminal element DN607_RS12390 PF13007 Transposase C of IS166 homeodomain DN607_RS12390 PF03050 Transposase IS66 family DN607_RS12390 PF13005 zinc-finger binding domain of transposase IS66 DN607_RS12440 PF05958 tRNA (Uracil-5-)-methyltransferase DN607_RS12455 PF13732 Domain of unknown function (DUF4162) DN607_RS12455 PF00005 ABC transporter DN607_RS12470 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS12470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS12475 PF00072 Response regulator receiver domain DN607_RS12475 PF00486 Transcriptional regulatory protein, C terminal DN607_RS12495 PF01695 IstB-like ATP binding protein DN607_RS12505 PF01443 Viral (Superfamily 1) RNA helicase DN607_RS12505 PF03389 MobA/MobL family DN607_RS12505 PF17841 BID domain of Bartonella effector protein (Bep) DN607_RS12515 PF00005 ABC transporter DN607_RS12520 PF16736 Single Cache-like DN607_RS12520 PF00989 PAS fold DN607_RS12520 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS12520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS12525 PF00072 Response regulator receiver domain DN607_RS12525 PF00486 Transcriptional regulatory protein, C terminal DN607_RS12535 PF01938 TRAM domain DN607_RS12535 PF05958 tRNA (Uracil-5-)-methyltransferase DN607_RS12540 PF01336 OB-fold nucleic acid binding domain DN607_RS12540 PF01966 HD domain DN607_RS12545 PF13180 PDZ domain DN607_RS12550 PF01713 Smr domain DN607_RS12550 PF00488 MutS domain V DN607_RS12555 PF00072 Response regulator receiver domain DN607_RS12555 PF00486 Transcriptional regulatory protein, C terminal DN607_RS12560 PF13426 PAS domain DN607_RS12560 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS12560 PF00672 HAMP domain DN607_RS12560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS12580 PF00772 DnaB-like helicase N terminal domain DN607_RS12580 PF03796 DnaB-like helicase C terminal domain DN607_RS12585 PF03948 Ribosomal protein L9, C-terminal domain DN607_RS12585 PF01281 Ribosomal protein L9, N-terminal domain DN607_RS12590 PF01368 DHH family DN607_RS12590 PF02272 DHHA1 domain DN607_RS12595 PF00579 tRNA synthetases class I (W and Y) DN607_RS12605 PF01546 Peptidase family M20/M25/M40 DN607_RS12610 PF00689 Cation transporting ATPase, C-terminus DN607_RS12610 PF00690 Cation transporter/ATPase, N-terminus DN607_RS12615 PF00455 DeoR C terminal sensor domain DN607_RS12615 PF08220 DeoR-like helix-turn-helix domain DN607_RS12620 PF00294 pfkB family carbohydrate kinase DN607_RS12625 PF02653 Branched-chain amino acid transport system / permease component DN607_RS12630 PF00005 ABC transporter DN607_RS12635 PF13407 Periplasmic binding protein domain DN607_RS12645 PF00860 Permease family DN607_RS12655 PF00155 Aminotransferase class I and II DN607_RS12665 PF01979 Amidohydrolase family DN607_RS12665 PF13382 Adenine deaminase C-terminal domain DN607_RS12670 PF13382 Adenine deaminase C-terminal domain DN607_RS12670 PF01979 Amidohydrolase family DN607_RS12675 PF02390 Putative methyltransferase DN607_RS12690 PF01496 V-type ATPase 116kDa subunit family DN607_RS12710 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN607_RS12710 PF16886 ATPsynthase alpha/beta subunit N-term extension DN607_RS12710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN607_RS12715 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN607_RS12715 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN607_RS12720 PF01813 ATP synthase subunit D DN607_RS12725 PF02661 Fic/DOC family DN607_RS12730 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DN607_RS12730 PF02806 Alpha amylase, C-terminal all-beta domain DN607_RS12730 PF00128 Alpha amylase, catalytic domain DN607_RS12745 PF09334 tRNA synthetases class I (M) DN607_RS12745 PF01588 Putative tRNA binding domain DN607_RS12750 PF01554 MatE DN607_RS12755 PF07670 Nucleoside recognition DN607_RS12770 PF00005 ABC transporter DN607_RS12775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN607_RS12780 PF05175 Methyltransferase small domain DN607_RS12785 PF04468 PSP1 C-terminal conserved region DN607_RS12790 PF12169 DNA polymerase III subunits gamma and tau domain III DN607_RS12795 PF00625 Guanylate kinase DN607_RS12810 PF14693 Ribosomal protein TL5, C-terminal domain DN607_RS12810 PF01386 Ribosomal L25p family DN607_RS12820 PF06397 Desulfoferrodoxin, N-terminal domain DN607_RS12820 PF01880 Desulfoferrodoxin DN607_RS12865 PF02625 XdhC and CoxI family DN607_RS12865 PF13478 XdhC Rossmann domain DN607_RS12870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS12870 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS12870 PF00072 Response regulator receiver domain DN607_RS12870 PF09308 LuxQ, periplasmic DN607_RS12880 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS12880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS12890 PF01048 Phosphorylase superfamily DN607_RS12895 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DN607_RS12900 PF00557 Metallopeptidase family M24 DN607_RS12900 PF01321 Creatinase/Prolidase N-terminal domain DN607_RS12905 PF01968 Hydantoinase/oxoprolinase DN607_RS12905 PF05378 Hydantoinase/oxoprolinase N-terminal region DN607_RS12915 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DN607_RS12915 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DN607_RS12920 PF01554 MatE DN607_RS12925 PF07690 Major Facilitator Superfamily DN607_RS12935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN607_RS12935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN607_RS12940 PF00155 Aminotransferase class I and II DN607_RS12945 PF01037 Lrp/AsnC ligand binding domain DN607_RS12960 PF00990 Diguanylate cyclase, GGDEF domain DN607_RS12960 PF07694 5TMR of 5TMR-LYT DN607_RS13000 PF00232 Glycosyl hydrolase family 1 DN607_RS13015 PF13173 AAA domain DN607_RS13015 PF13635 Domain of unknown function (DUF4143) DN607_RS13045 PF01554 MatE DN607_RS13050 PF01066 CDP-alcohol phosphatidyltransferase DN607_RS13060 PF16736 Single Cache-like DN607_RS13060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN607_RS13060 PF00512 His Kinase A (phospho-acceptor) domain DN607_RS13060 PF00989 PAS fold DN607_RS13065 PF00072 Response regulator receiver domain DN607_RS13065 PF00486 Transcriptional regulatory protein, C terminal DN607_RS13070 PF13091 PLD-like domain DN607_RS13075 PF13091 PLD-like domain DN607_RS13080 PF04607 Region found in RelA / SpoT proteins DN607_RS13120 PF01791 DeoC/LacD family aldolase DN607_RS13140 PF00665 Integrase core domain DN607_RS13140 PF13333 Integrase core domain DN607_RS13140 PF13276 HTH-like domain DN607_RS13145 PF00145 C-5 cytosine-specific DNA methylase DN607_RS13235 PF02403 Seryl-tRNA synthetase N-terminal domain DN607_RS13235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN607_RS13245 PF17762 HTH domain found in ParB protein DN607_RS13245 PF02195 ParB-like nuclease domain DN607_RS13250 PF13614 AAA domain DN607_RS13255 PF12697 Alpha/beta hydrolase family DN607_RS13260 PF02527 rRNA small subunit methyltransferase G DN607_RS13275 PF13932 GidA associated domain DN607_RS13275 PF01134 Glucose inhibited division protein A DN607_RS13280 PF10396 GTP-binding protein TrmE N-terminus DN607_RS13280 PF12631 MnmE helical domain DN607_RS13280 PF01926 50S ribosome-binding GTPase DN607_RS13285 PF01424 R3H domain DN607_RS13285 PF14804 Jag N-terminus DN607_RS13290 PF02096 60Kd inner membrane protein DN607_RS13295 PF01809 Putative membrane protein insertion efficiency factor DN607_RS13300 PF00825 Ribonuclease P DN607_RS13305 PF00468 Ribosomal protein L34