locus-tag class description AVR83_RS00235 PF00270 DEAD/DEAH box helicase AVR83_RS00235 PF00271 Helicase conserved C-terminal domain AVR83_RS00240 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVR83_RS00240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVR83_RS00245 PF00313 'Cold-shock' DNA-binding domain AVR83_RS00260 PF01380 SIS domain AVR83_RS00260 PF01418 Helix-turn-helix domain, rpiR family AVR83_RS00270 PF02378 Phosphotransferase system, EIIC AVR83_RS00285 PF05958 tRNA (Uracil-5-)-methyltransferase AVR83_RS00285 PF01938 TRAM domain AVR83_RS00290 PF00781 Diacylglycerol kinase catalytic domain AVR83_RS00295 PF02934 GatB/GatE catalytic domain AVR83_RS00295 PF02637 GatB domain AVR83_RS00300 PF01425 Amidase AVR83_RS00305 PF02686 Glu-tRNAGln amidotransferase C subunit AVR83_RS00310 PF07537 CamS sex pheromone cAM373 precursor AVR83_RS00315 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AVR83_RS00315 PF03120 NAD-dependent DNA ligase OB-fold domain AVR83_RS00315 PF12826 Helix-hairpin-helix motif AVR83_RS00315 PF01653 NAD-dependent DNA ligase adenylation domain AVR83_RS00315 PF00533 BRCA1 C Terminus (BRCT) domain AVR83_RS00320 PF00580 UvrD/REP helicase N-terminal domain AVR83_RS00320 PF13361 UvrD-like helicase C-terminal domain AVR83_RS00325 PF02222 ATP-grasp domain AVR83_RS00325 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AVR83_RS00330 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AVR83_RS00340 PF13457 GW (Gly-Tryp) dipeptide domain AVR83_RS00340 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AVR83_RS00345 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVR83_RS00345 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVR83_RS00355 PF00348 Polyprenyl synthetase AVR83_RS00370 PF00664 ABC transporter transmembrane region AVR83_RS00370 PF00005 ABC transporter AVR83_RS00375 PF00664 ABC transporter transmembrane region AVR83_RS00375 PF00005 ABC transporter AVR83_RS00380 PF02322 Cytochrome bd terminal oxidase subunit II AVR83_RS00385 PF01654 Cytochrome bd terminal oxidase subunit I AVR83_RS00395 PF12822 ECF transporter, substrate-specific component AVR83_RS00400 PF13520 Amino acid permease AVR83_RS00410 PF03949 Malic enzyme, NAD binding domain AVR83_RS00410 PF00390 Malic enzyme, N-terminal domain AVR83_RS00415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVR83_RS00415 PF03466 LysR substrate binding domain AVR83_RS00425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVR83_RS00425 PF03466 LysR substrate binding domain AVR83_RS00430 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase AVR83_RS00430 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AVR83_RS00435 PF00890 FAD binding domain AVR83_RS00435 PF14537 Cytochrome c3 AVR83_RS00440 PF10415 Fumarase C C-terminus AVR83_RS00440 PF00206 Lyase AVR83_RS00450 PF04223 Citrate lyase, alpha subunit (CitF) AVR83_RS00455 PF03328 HpcH/HpaI aldolase/citrate lyase family AVR83_RS00460 PF06857 Malonate decarboxylase delta subunit (MdcD) AVR83_RS00465 PF08218 Citrate lyase ligase C-terminal domain AVR83_RS00470 PF00390 Malic enzyme, N-terminal domain AVR83_RS00470 PF03949 Malic enzyme, NAD binding domain AVR83_RS00480 PF00939 Sodium:sulfate symporter transmembrane region AVR83_RS00485 PF00056 lactate/malate dehydrogenase, NAD binding domain AVR83_RS00485 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVR83_RS00495 PF01297 Zinc-uptake complex component A periplasmic AVR83_RS00500 PF00950 ABC 3 transport family AVR83_RS00505 PF00005 ABC transporter AVR83_RS00510 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AVR83_RS00515 PF02311 AraC-like ligand binding domain AVR83_RS00515 PF12833 Helix-turn-helix domain AVR83_RS00520 PF05681 Fumarate hydratase (Fumerase) AVR83_RS00525 PF05683 Fumarase C-terminus AVR83_RS00530 PF01883 Iron-sulfur cluster assembly protein AVR83_RS00535 PF00939 Sodium:sulfate symporter transmembrane region AVR83_RS00540 PF01761 3-dehydroquinate synthase AVR83_RS00545 PF00793 DAHP synthetase I family AVR83_RS00545 PF18152 DAHP synthase ferredoxin-like domain AVR83_RS00550 PF08501 Shikimate dehydrogenase substrate binding domain AVR83_RS00550 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AVR83_RS00555 PF02780 Transketolase, C-terminal domain AVR83_RS00555 PF02779 Transketolase, pyrimidine binding domain AVR83_RS00555 PF00456 Transketolase, thiamine diphosphate binding domain AVR83_RS00570 PF02645 Uncharacterised protein, DegV family COG1307 AVR83_RS00575 PF00380 Ribosomal protein S9/S16 AVR83_RS00580 PF00572 Ribosomal protein L13 AVR83_RS00585 PF01416 tRNA pseudouridine synthase AVR83_RS00590 PF02361 Cobalt transport protein AVR83_RS00595 PF00005 ABC transporter AVR83_RS00600 PF00005 ABC transporter AVR83_RS00605 PF02424 ApbE family AVR83_RS00610 PF04205 FMN-binding domain AVR83_RS00630 PF00348 Polyprenyl synthetase AVR83_RS00635 PF01196 Ribosomal protein L17 AVR83_RS00640 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AVR83_RS00640 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AVR83_RS00640 PF01000 RNA polymerase Rpb3/RpoA insert domain AVR83_RS00645 PF00411 Ribosomal protein S11 AVR83_RS00650 PF00416 Ribosomal protein S13/S18 AVR83_RS00655 PF01176 Translation initiation factor 1A / IF-1 AVR83_RS00660 PF05191 Adenylate kinase, active site lid AVR83_RS00665 PF00344 SecY translocase AVR83_RS00670 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AVR83_RS00675 PF00327 Ribosomal protein L30p/L7e AVR83_RS00680 PF00333 Ribosomal protein S5, N-terminal domain AVR83_RS00680 PF03719 Ribosomal protein S5, C-terminal domain AVR83_RS00685 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AVR83_RS00690 PF00347 Ribosomal protein L6 AVR83_RS00695 PF00410 Ribosomal protein S8 AVR83_RS00700 PF00253 Ribosomal protein S14p/S29e AVR83_RS00705 PF00281 Ribosomal protein L5 AVR83_RS00705 PF00673 ribosomal L5P family C-terminus AVR83_RS00710 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AVR83_RS00710 PF00467 KOW motif AVR83_RS00715 PF00238 Ribosomal protein L14p/L23e AVR83_RS00720 PF00366 Ribosomal protein S17 AVR83_RS00725 PF00831 Ribosomal L29 protein AVR83_RS00730 PF00252 Ribosomal protein L16p/L10e AVR83_RS00735 PF07650 KH domain AVR83_RS00735 PF00189 Ribosomal protein S3, C-terminal domain AVR83_RS00740 PF00237 Ribosomal protein L22p/L17e AVR83_RS00745 PF00203 Ribosomal protein S19 AVR83_RS00750 PF03947 Ribosomal Proteins L2, C-terminal domain AVR83_RS00750 PF00181 Ribosomal Proteins L2, RNA binding domain AVR83_RS00755 PF00276 Ribosomal protein L23 AVR83_RS00760 PF00573 Ribosomal protein L4/L1 family AVR83_RS00765 PF00297 Ribosomal protein L3 AVR83_RS00770 PF00338 Ribosomal protein S10p/S20e AVR83_RS00775 PF03144 Elongation factor Tu domain 2 AVR83_RS00775 PF00679 Elongation factor G C-terminus AVR83_RS00775 PF14492 Elongation Factor G, domain II AVR83_RS00775 PF00009 Elongation factor Tu GTP binding domain AVR83_RS00775 PF03764 Elongation factor G, domain IV AVR83_RS00780 PF00177 Ribosomal protein S7p/S5e AVR83_RS00785 PF00164 Ribosomal protein S12/S23 AVR83_RS00790 PF01478 Type IV leader peptidase family AVR83_RS00790 PF06750 Bacterial Peptidase A24 N-terminal domain AVR83_RS00795 PF04983 RNA polymerase Rpb1, domain 3 AVR83_RS00795 PF04997 RNA polymerase Rpb1, domain 1 AVR83_RS00795 PF05000 RNA polymerase Rpb1, domain 4 AVR83_RS00795 PF00623 RNA polymerase Rpb1, domain 2 AVR83_RS00795 PF04998 RNA polymerase Rpb1, domain 5 AVR83_RS00800 PF10385 RNA polymerase beta subunit external 1 domain AVR83_RS00800 PF00562 RNA polymerase Rpb2, domain 6 AVR83_RS00800 PF04560 RNA polymerase Rpb2, domain 7 AVR83_RS00800 PF04565 RNA polymerase Rpb2, domain 3 AVR83_RS00800 PF04561 RNA polymerase Rpb2, domain 2 AVR83_RS00800 PF04563 RNA polymerase beta subunit AVR83_RS00805 PF08360 QacR-like protein, C-terminal region AVR83_RS00805 PF00440 Bacterial regulatory proteins, tetR family AVR83_RS00810 PF02861 Clp amino terminal domain, pathogenicity island component AVR83_RS00810 PF10431 C-terminal, D2-small domain, of ClpB protein AVR83_RS00810 PF00004 ATPase family associated with various cellular activities (AAA) AVR83_RS00810 PF07724 AAA domain (Cdc48 subfamily) AVR83_RS00810 PF17871 AAA lid domain AVR83_RS00815 PF05848 CtsR N-terminal HTH domain AVR83_RS00815 PF17727 CtsR C-terminal dimerization domain AVR83_RS00855 PF02403 Seryl-tRNA synthetase N-terminal domain AVR83_RS00855 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVR83_RS00860 PF01712 Deoxynucleoside kinase AVR83_RS00870 PF00324 Amino acid permease AVR83_RS00875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVR83_RS00875 PF00205 Thiamine pyrophosphate enzyme, central domain AVR83_RS00875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVR83_RS00880 PF02082 Transcriptional regulator AVR83_RS00900 PF03816 Cell envelope-related transcriptional attenuator domain AVR83_RS00910 PF06738 Putative threonine/serine exporter AVR83_RS00915 PF00313 'Cold-shock' DNA-binding domain AVR83_RS00935 PF07690 Major Facilitator Superfamily AVR83_RS00965 PF00733 Asparagine synthase AVR83_RS00965 PF13537 Glutamine amidotransferase domain AVR83_RS00970 PF13840 ACT domain AVR83_RS00970 PF00696 Amino acid kinase family AVR83_RS00975 PF01225 Mur ligase family, catalytic domain AVR83_RS00975 PF08245 Mur ligase middle domain AVR83_RS00975 PF02875 Mur ligase family, glutamate ligase domain AVR83_RS00985 PF07859 alpha/beta hydrolase fold AVR83_RS01025 PF01022 Bacterial regulatory protein, arsR family AVR83_RS01030 PF00849 RNA pseudouridylate synthase AVR83_RS01035 PF09382 RQC domain AVR83_RS01035 PF00570 HRDC domain AVR83_RS01035 PF00271 Helicase conserved C-terminal domain AVR83_RS01035 PF00270 DEAD/DEAH box helicase AVR83_RS01035 PF16124 RecQ zinc-binding AVR83_RS01055 PF03577 Peptidase family C69 AVR83_RS01060 PF03590 Aspartate-ammonia ligase AVR83_RS01065 PF00152 tRNA synthetases class II (D, K and N) AVR83_RS01065 PF01336 OB-fold nucleic acid binding domain AVR83_RS01070 PF02525 Flavodoxin-like fold AVR83_RS01080 PF00890 FAD binding domain AVR83_RS01080 PF14537 Cytochrome c3 AVR83_RS01085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVR83_RS01085 PF03466 LysR substrate binding domain AVR83_RS01100 PF00485 Phosphoribulokinase / Uridine kinase family AVR83_RS01125 PF01433 Peptidase family M1 domain AVR83_RS01125 PF11838 ERAP1-like C-terminal domain AVR83_RS01145 PF01557 Fumarylacetoacetate (FAA) hydrolase family AVR83_RS01155 PF03780 Asp23 family, cell envelope-related function AVR83_RS01170 PF04226 Transglycosylase associated protein AVR83_RS01175 PF01757 Acyltransferase family AVR83_RS01190 PF07690 Major Facilitator Superfamily AVR83_RS01195 PF01638 HxlR-like helix-turn-helix AVR83_RS01200 PF02517 CPBP intramembrane metalloprotease AVR83_RS01205 PF01381 Helix-turn-helix AVR83_RS01245 PF00004 ATPase family associated with various cellular activities (AAA) AVR83_RS01245 PF17866 AAA lid domain AVR83_RS01250 PF00117 Glutamine amidotransferase class-I AVR83_RS01250 PF00958 GMP synthase C terminal domain AVR83_RS01250 PF02540 NAD synthase AVR83_RS01255 PF00485 Phosphoribulokinase / Uridine kinase family AVR83_RS01260 PF03060 Nitronate monooxygenase AVR83_RS01265 PF13538 UvrD-like helicase C-terminal domain AVR83_RS01270 PF09335 SNARE associated Golgi protein AVR83_RS01275 PF04229 GrpB protein AVR83_RS01275 PF13673 Acetyltransferase (GNAT) domain AVR83_RS01280 PF00999 Sodium/hydrogen exchanger family AVR83_RS01280 PF02080 TrkA-C domain AVR83_RS01280 PF02254 TrkA-N domain AVR83_RS01285 PF00300 Histidine phosphatase superfamily (branch 1) AVR83_RS01290 PF00300 Histidine phosphatase superfamily (branch 1) AVR83_RS01300 PF00893 Small Multidrug Resistance protein AVR83_RS01305 PF13344 Haloacid dehalogenase-like hydrolase AVR83_RS01305 PF00293 NUDIX domain AVR83_RS01310 PF01926 50S ribosome-binding GTPase AVR83_RS01310 PF13167 GTP-binding GTPase N-terminal AVR83_RS01310 PF16360 GTP-binding GTPase Middle Region AVR83_RS01340 PF01047 MarR family AVR83_RS01345 PF13520 Amino acid permease AVR83_RS01350 PF04794 YdjC-like protein AVR83_RS01355 PF00367 phosphotransferase system, EIIB AVR83_RS01355 PF02378 Phosphotransferase system, EIIC AVR83_RS01365 PF00367 phosphotransferase system, EIIB AVR83_RS01365 PF02378 Phosphotransferase system, EIIC AVR83_RS01365 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AVR83_RS01370 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS01375 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS01380 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVR83_RS01385 PF00005 ABC transporter AVR83_RS01395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVR83_RS01395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVR83_RS01400 PF00155 Aminotransferase class I and II AVR83_RS01405 PF13419 Haloacid dehalogenase-like hydrolase AVR83_RS01420 PF01475 Ferric uptake regulator family AVR83_RS01425 PF00625 Guanylate kinase AVR83_RS01430 PF03099 Biotin/lipoate A/B protein ligase family AVR83_RS01430 PF00293 NUDIX domain AVR83_RS01445 PF13520 Amino acid permease AVR83_RS01460 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal AVR83_RS01460 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AVR83_RS01460 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AVR83_RS01465 PF01757 Acyltransferase family AVR83_RS01475 PF00561 alpha/beta hydrolase fold AVR83_RS01480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVR83_RS01480 PF00205 Thiamine pyrophosphate enzyme, central domain AVR83_RS01480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVR83_RS01485 PF01687 Riboflavin kinase AVR83_RS01485 PF06574 FAD synthetase AVR83_RS01490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVR83_RS01490 PF00205 Thiamine pyrophosphate enzyme, central domain AVR83_RS01490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVR83_RS01495 PF00860 Permease family AVR83_RS01505 PF04991 LicD family AVR83_RS01515 PF02503 Polyphosphate kinase middle domain AVR83_RS01515 PF17941 Polyphosphate kinase C-terminal domain 1 AVR83_RS01515 PF13090 Polyphosphate kinase C-terminal domain 2 AVR83_RS01515 PF13089 Polyphosphate kinase N-terminal domain AVR83_RS01520 PF02541 Ppx/GppA phosphatase family AVR83_RS01520 PF01761 3-dehydroquinate synthase AVR83_RS01525 PF07690 Major Facilitator Superfamily AVR83_RS01540 PF03960 ArsC family AVR83_RS01555 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVR83_RS01555 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVR83_RS01575 PF00881 Nitroreductase family AVR83_RS01590 PF01263 Aldose 1-epimerase AVR83_RS01610 PF01380 SIS domain AVR83_RS01615 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVR83_RS01615 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVR83_RS01615 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVR83_RS01615 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVR83_RS01625 PF02457 DisA bacterial checkpoint controller nucleotide-binding AVR83_RS01640 PF00999 Sodium/hydrogen exchanger family AVR83_RS01645 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AVR83_RS01645 PF01565 FAD binding domain AVR83_RS01650 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVR83_RS01655 PF03372 Endonuclease/Exonuclease/phosphatase family AVR83_RS01660 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVR83_RS01660 PF14579 Helix-hairpin-helix motif AVR83_RS01660 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVR83_RS01660 PF11490 DNA polymerase III polC-type N-terminus II AVR83_RS01660 PF14480 DNA polymerase III polC-type N-terminus I AVR83_RS01660 PF02811 PHP domain AVR83_RS01660 PF00929 Exonuclease AVR83_RS01670 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AVR83_RS01675 PF01515 Phosphate acetyl/butaryl transferase AVR83_RS01680 PF03167 Uracil DNA glycosylase superfamily AVR83_RS01695 PF00005 ABC transporter AVR83_RS01700 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS01710 PF01668 SmpB protein AVR83_RS01715 PF17876 Cold shock domain AVR83_RS01715 PF00773 RNB domain AVR83_RS01715 PF08206 Ribonuclease B OB domain AVR83_RS01715 PF00575 S1 RNA binding domain AVR83_RS01720 PF12146 Serine aminopeptidase, S33 AVR83_RS01725 PF03840 Preprotein translocase SecG subunit AVR83_RS01730 PF00654 Voltage gated chloride channel AVR83_RS01740 PF00113 Enolase, C-terminal TIM barrel domain AVR83_RS01740 PF03952 Enolase, N-terminal domain AVR83_RS01745 PF00121 Triosephosphate isomerase AVR83_RS01750 PF00162 Phosphoglycerate kinase AVR83_RS01755 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AVR83_RS01755 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AVR83_RS01760 PF04198 Putative sugar-binding domain AVR83_RS01765 PF04552 Sigma-54, DNA binding domain AVR83_RS01765 PF04963 Sigma-54 factor, core binding domain AVR83_RS01765 PF00309 Sigma-54 factor, Activator interacting domain (AID) AVR83_RS01775 PF00574 Clp protease AVR83_RS01780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVR83_RS01780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVR83_RS01785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVR83_RS01790 PF10298 WhiA N-terminal LAGLIDADG-like domain AVR83_RS01790 PF14527 WhiA LAGLIDADG-like domain AVR83_RS01790 PF02650 WhiA C-terminal HTH domain AVR83_RS01795 PF01933 Uncharacterised protein family UPF0052 AVR83_RS01800 PF03668 P-loop ATPase protein family AVR83_RS01810 PF14698 Argininosuccinate lyase C-terminal AVR83_RS01810 PF00206 Lyase AVR83_RS01815 PF00764 Arginosuccinate synthase AVR83_RS01820 PF02664 S-Ribosylhomocysteinase (LuxS) AVR83_RS01825 PF17760 UvrA interaction domain AVR83_RS01825 PF17755 UvrA DNA-binding domain AVR83_RS01825 PF00005 ABC transporter AVR83_RS01830 PF04851 Type III restriction enzyme, res subunit AVR83_RS01830 PF00271 Helicase conserved C-terminal domain AVR83_RS01830 PF12344 Ultra-violet resistance protein B AVR83_RS01830 PF17757 UvrB interaction domain AVR83_RS01830 PF02151 UvrB/uvrC motif AVR83_RS01840 PF07690 Major Facilitator Superfamily AVR83_RS01850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVR83_RS01850 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVR83_RS01860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AVR83_RS01860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AVR83_RS01860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AVR83_RS01860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AVR83_RS01870 PF04239 Protein of unknown function (DUF421) AVR83_RS01875 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVR83_RS01910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVR83_RS01910 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVR83_RS01920 PF00483 Nucleotidyl transferase AVR83_RS01925 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AVR83_RS01925 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AVR83_RS01930 PF01790 Prolipoprotein diacylglyceryl transferase AVR83_RS01935 PF07475 HPr Serine kinase C-terminal domain AVR83_RS01935 PF02603 HPr Serine kinase N terminus AVR83_RS01940 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AVR83_RS01945 PF04024 PspC domain AVR83_RS01950 PF01895 PhoU domain AVR83_RS01955 PF00005 ABC transporter AVR83_RS01960 PF00005 ABC transporter AVR83_RS01965 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS01970 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS01975 PF12849 PBP superfamily domain AVR83_RS01980 PF16736 Single Cache-like AVR83_RS01980 PF00989 PAS fold AVR83_RS01980 PF00512 His Kinase A (phospho-acceptor) domain AVR83_RS01980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVR83_RS01985 PF00072 Response regulator receiver domain AVR83_RS01985 PF00486 Transcriptional regulatory protein, C terminal AVR83_RS01990 PF17820 PDZ domain AVR83_RS02000 PF07517 SecA DEAD-like domain AVR83_RS02000 PF01043 SecA preprotein cross-linking domain AVR83_RS02000 PF07516 SecA Wing and Scaffold domain AVR83_RS02005 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AVR83_RS02005 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AVR83_RS02015 PF00271 Helicase conserved C-terminal domain AVR83_RS02015 PF04851 Type III restriction enzyme, res subunit AVR83_RS02020 PF01205 Uncharacterized protein family UPF0029 AVR83_RS02020 PF09186 Domain of unknown function (DUF1949) AVR83_RS02025 PF12849 PBP superfamily domain AVR83_RS02030 PF00953 Glycosyl transferase family 4 AVR83_RS02035 PF13520 Amino acid permease AVR83_RS02040 PF00118 TCP-1/cpn60 chaperonin family AVR83_RS02045 PF00166 Chaperonin 10 Kd subunit AVR83_RS02050 PF02517 CPBP intramembrane metalloprotease AVR83_RS02055 PF02629 CoA binding domain AVR83_RS02055 PF06971 Putative DNA-binding protein N-terminus AVR83_RS02060 PF00005 ABC transporter AVR83_RS02060 PF16326 ABC transporter C-terminal domain AVR83_RS02060 PF12848 ABC transporter AVR83_RS02065 PF00814 Glycoprotease family AVR83_RS02070 PF00583 Acetyltransferase (GNAT) family AVR83_RS02075 PF00583 Acetyltransferase (GNAT) family AVR83_RS02080 PF00814 Glycoprotease family AVR83_RS02090 PF00005 ABC transporter AVR83_RS02095 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS02100 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS02105 PF13419 Haloacid dehalogenase-like hydrolase AVR83_RS02110 PF00266 Aminotransferase class-V AVR83_RS02115 PF16363 GDP-mannose 4,6 dehydratase AVR83_RS02125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AVR83_RS02130 PF06156 Initiation control protein YabA AVR83_RS02135 PF09115 DNA polymerase III, delta subunit, C terminal AVR83_RS02140 PF06153 Cyclic-di-AMP receptor AVR83_RS02145 PF02223 Thymidylate kinase AVR83_RS02165 PF12169 DNA polymerase III subunits gamma and tau domain III AVR83_RS02175 PF14437 MafB19-like deaminase AVR83_RS02180 PF05175 Methyltransferase small domain AVR83_RS02185 PF00462 Glutaredoxin AVR83_RS02190 PF08343 Ribonucleotide reductase N-terminal AVR83_RS02190 PF00317 Ribonucleotide reductase, all-alpha domain AVR83_RS02190 PF02867 Ribonucleotide reductase, barrel domain AVR83_RS02195 PF00268 Ribonucleotide reductase, small chain AVR83_RS02200 PF03641 Possible lysine decarboxylase AVR83_RS02205 PF03706 Lysylphosphatidylglycerol synthase TM region AVR83_RS02205 PF09924 Uncharacterised conserved protein (DUF2156) AVR83_RS02290 PF01551 Peptidase family M23 AVR83_RS02475 PF01381 Helix-turn-helix AVR83_RS02505 PF00589 Phage integrase family AVR83_RS02505 PF02899 Phage integrase, N-terminal SAM-like domain AVR83_RS02510 PF00542 Ribosomal protein L7/L12 C-terminal domain AVR83_RS02510 PF16320 Ribosomal protein L7/L12 dimerisation domain AVR83_RS02515 PF00466 Ribosomal protein L10 AVR83_RS02520 PF00687 Ribosomal protein L1p/L10e family AVR83_RS02525 PF00298 Ribosomal protein L11, RNA binding domain AVR83_RS02525 PF03946 Ribosomal protein L11, N-terminal domain AVR83_RS02535 PF00467 KOW motif AVR83_RS02535 PF02357 Transcription termination factor nusG AVR83_RS02545 PF00471 Ribosomal protein L33 AVR83_RS02560 PF00588 SpoU rRNA Methylase family AVR83_RS02560 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVR83_RS02565 PF00636 Ribonuclease III domain AVR83_RS02570 PF01406 tRNA synthetases class I (C) catalytic domain AVR83_RS02570 PF09190 DALR domain AVR83_RS02575 PF00749 tRNA synthetases class I (E and Q), catalytic domain AVR83_RS02585 PF18073 Rubredoxin metal binding domain AVR83_RS02590 PF00692 dUTPase AVR83_RS02600 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AVR83_RS02605 PF03051 Peptidase C1-like family AVR83_RS02615 PF00300 Histidine phosphatase superfamily (branch 1) AVR83_RS02620 PF00892 EamA-like transporter family AVR83_RS02630 PF03816 Cell envelope-related transcriptional attenuator domain AVR83_RS02635 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AVR83_RS02640 PF01039 Carboxyl transferase domain AVR83_RS02645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVR83_RS02645 PF00289 Biotin carboxylase, N-terminal domain AVR83_RS02645 PF02785 Biotin carboxylase C-terminal domain AVR83_RS02655 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AVR83_RS02655 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AVR83_RS02660 PF03830 PTS system sorbose subfamily IIB component AVR83_RS02660 PF03610 PTS system fructose IIA component AVR83_RS02665 PF03830 PTS system sorbose subfamily IIB component AVR83_RS02665 PF03610 PTS system fructose IIA component AVR83_RS02670 PF00158 Sigma-54 interaction domain AVR83_RS02670 PF00874 PRD domain AVR83_RS02670 PF03610 PTS system fructose IIA component AVR83_RS02680 PF03613 PTS system mannose/fructose/sorbose family IID component AVR83_RS02685 PF03609 PTS system sorbose-specific iic component AVR83_RS02690 PF03610 PTS system fructose IIA component AVR83_RS02690 PF03830 PTS system sorbose subfamily IIB component AVR83_RS02710 PF01471 Putative peptidoglycan binding domain AVR83_RS02710 PF08924 Domain of unknown function (DUF1906) AVR83_RS02725 PF00288 GHMP kinases N terminal domain AVR83_RS02725 PF08544 GHMP kinases C terminal AVR83_RS02730 PF00742 Homoserine dehydrogenase AVR83_RS02730 PF03447 Homoserine dehydrogenase, NAD binding domain AVR83_RS02730 PF01842 ACT domain AVR83_RS02735 PF10263 SprT-like family AVR83_RS02740 PF16921 Tex protein YqgF-like domain AVR83_RS02740 PF09371 Tex-like protein N-terminal domain AVR83_RS02740 PF00575 S1 RNA binding domain AVR83_RS02740 PF17674 HHH domain AVR83_RS02750 PF00690 Cation transporter/ATPase, N-terminus AVR83_RS02750 PF00689 Cation transporting ATPase, C-terminus AVR83_RS02755 PF02540 NAD synthase AVR83_RS02760 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AVR83_RS02760 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain AVR83_RS02760 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AVR83_RS02765 PF03808 Glycosyl transferase WecB/TagA/CpsF family AVR83_RS02770 PF00392 Bacterial regulatory proteins, gntR family AVR83_RS02770 PF07702 UTRA domain AVR83_RS02775 PF13382 Adenine deaminase C-terminal domain AVR83_RS02775 PF01979 Amidohydrolase family AVR83_RS02780 PF14748 Pyrroline-5-carboxylate reductase dimerisation AVR83_RS02780 PF03807 NADP oxidoreductase coenzyme F420-dependent AVR83_RS02785 PF04973 Nicotinamide mononucleotide transporter AVR83_RS02830 PF00854 POT family AVR83_RS02870 PF01336 OB-fold nucleic acid binding domain AVR83_RS02870 PF00152 tRNA synthetases class II (D, K and N) AVR83_RS02875 PF01207 Dihydrouridine synthase (Dus) AVR83_RS02880 PF01430 Hsp33 protein AVR83_RS02885 PF01434 Peptidase family M41 AVR83_RS02885 PF00004 ATPase family associated with various cellular activities (AAA) AVR83_RS02885 PF06480 FtsH Extracellular AVR83_RS02885 PF17862 AAA+ lid domain AVR83_RS02890 PF11734 TilS substrate C-terminal domain AVR83_RS02890 PF01171 PP-loop family AVR83_RS02890 PF00156 Phosphoribosyl transferase domain AVR83_RS02895 PF01171 PP-loop family AVR83_RS02895 PF11734 TilS substrate C-terminal domain AVR83_RS02900 PF00575 S1 RNA binding domain AVR83_RS02910 PF01479 S4 domain AVR83_RS02915 PF14667 Polysaccharide biosynthesis C-terminal domain AVR83_RS02915 PF01943 Polysaccharide biosynthesis protein AVR83_RS02920 PF17757 UvrB interaction domain AVR83_RS02920 PF03461 TRCF domain AVR83_RS02920 PF00271 Helicase conserved C-terminal domain AVR83_RS02920 PF02559 CarD-like/TRCF domain AVR83_RS02920 PF00270 DEAD/DEAH box helicase AVR83_RS02925 PF01195 Peptidyl-tRNA hydrolase AVR83_RS02930 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVR83_RS02930 PF00056 lactate/malate dehydrogenase, NAD binding domain AVR83_RS02945 PF00561 alpha/beta hydrolase fold AVR83_RS02950 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVR83_RS02960 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVR83_RS02960 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVR83_RS02965 PF00202 Aminotransferase class-III AVR83_RS02970 PF00696 Amino acid kinase family AVR83_RS02975 PF01960 ArgJ family AVR83_RS02980 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVR83_RS02980 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVR83_RS02985 PF00117 Glutamine amidotransferase class-I AVR83_RS02985 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AVR83_RS02990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVR83_RS02990 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AVR83_RS02995 PF00005 ABC transporter AVR83_RS03010 PF02705 K+ potassium transporter AVR83_RS03015 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AVR83_RS03020 PF01168 Alanine racemase, N-terminal domain AVR83_RS03020 PF00842 Alanine racemase, C-terminal domain AVR83_RS03025 PF01648 4'-phosphopantetheinyl transferase superfamily AVR83_RS03030 PF00271 Helicase conserved C-terminal domain AVR83_RS03030 PF00270 DEAD/DEAH box helicase AVR83_RS03035 PF01225 Mur ligase family, catalytic domain AVR83_RS03035 PF02875 Mur ligase family, glutamate ligase domain AVR83_RS03035 PF08245 Mur ligase middle domain AVR83_RS03045 PF01435 Peptidase family M48 AVR83_RS03050 PF04011 LemA family AVR83_RS03055 PF04203 Sortase domain AVR83_RS03065 PF01197 Ribosomal protein L31 AVR83_RS03070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVR83_RS03070 PF07498 Rho termination factor, N-terminal domain AVR83_RS03070 PF07497 Rho termination factor, RNA-binding domain AVR83_RS03075 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVR83_RS03090 PF03313 Serine dehydratase alpha chain AVR83_RS03095 PF03315 Serine dehydratase beta chain AVR83_RS03095 PF01842 ACT domain AVR83_RS03105 PF02403 Seryl-tRNA synthetase N-terminal domain AVR83_RS03105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVR83_RS03110 PF00117 Glutamine amidotransferase class-I AVR83_RS03110 PF06418 CTP synthase N-terminus AVR83_RS03115 PF05066 HB1, ASXL, restriction endonuclease HTH domain AVR83_RS03125 PF03099 Biotin/lipoate A/B protein ligase family AVR83_RS03130 PF01966 HD domain AVR83_RS03155 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AVR83_RS03155 PF14572 Phosphoribosyl synthetase-associated domain AVR83_RS03165 PF00483 Nucleotidyl transferase AVR83_RS03165 PF00132 Bacterial transferase hexapeptide (six repeats) AVR83_RS03170 PF09182 Bacterial purine repressor, N-terminal AVR83_RS03170 PF00156 Phosphoribosyl transferase domain AVR83_RS03190 PF00950 ABC 3 transport family AVR83_RS03195 PF00005 ABC transporter AVR83_RS03200 PF12146 Serine aminopeptidase, S33 AVR83_RS03205 PF08544 GHMP kinases C terminal AVR83_RS03205 PF00288 GHMP kinases N terminal domain AVR83_RS03210 PF06257 Biofilm formation stimulator VEG AVR83_RS03215 PF00398 Ribosomal RNA adenine dimethylase AVR83_RS03220 PF13331 Domain of unknown function (DUF4093) AVR83_RS03225 PF01026 TatD related DNase AVR83_RS03230 PF07690 Major Facilitator Superfamily AVR83_RS03235 PF08264 Anticodon-binding domain of tRNA AVR83_RS03235 PF09334 tRNA synthetases class I (M) AVR83_RS03235 PF01588 Putative tRNA binding domain AVR83_RS03245 PF01904 Protein of unknown function DUF72 AVR83_RS03250 PF02146 Sir2 family AVR83_RS03260 PF00368 Hydroxymethylglutaryl-coenzyme A reductase AVR83_RS03265 PF02541 Ppx/GppA phosphatase family AVR83_RS03280 PF01207 Dihydrouridine synthase (Dus) AVR83_RS03285 PF01380 SIS domain AVR83_RS03285 PF01418 Helix-turn-helix domain, rpiR family AVR83_RS03290 PF00480 ROK family AVR83_RS03295 PF00232 Glycosyl hydrolase family 1 AVR83_RS03300 PF02378 Phosphotransferase system, EIIC AVR83_RS03315 PF02378 Phosphotransferase system, EIIC AVR83_RS03320 PF00392 Bacterial regulatory proteins, gntR family AVR83_RS03320 PF07702 UTRA domain AVR83_RS03325 PF00579 tRNA synthetases class I (W and Y) AVR83_RS03330 PF00795 Carbon-nitrogen hydrolase AVR83_RS03335 PF13538 UvrD-like helicase C-terminal domain AVR83_RS03370 PF00005 ABC transporter AVR83_RS03370 PF03412 Peptidase C39 family AVR83_RS03370 PF00664 ABC transporter transmembrane region AVR83_RS03390 PF04397 LytTr DNA-binding domain AVR83_RS03390 PF00072 Response regulator receiver domain AVR83_RS03395 PF00072 Response regulator receiver domain AVR83_RS03395 PF04397 LytTr DNA-binding domain AVR83_RS03420 PF00535 Glycosyl transferase family 2 AVR83_RS03455 PF00999 Sodium/hydrogen exchanger family AVR83_RS03460 PF05525 Branched-chain amino acid transport protein AVR83_RS03470 PF12833 Helix-turn-helix domain AVR83_RS03470 PF02311 AraC-like ligand binding domain AVR83_RS03485 PF12464 Maltose acetyltransferase AVR83_RS03485 PF00132 Bacterial transferase hexapeptide (six repeats) AVR83_RS03535 PF00230 Major intrinsic protein AVR83_RS03540 PF01266 FAD dependent oxidoreductase AVR83_RS03540 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AVR83_RS03545 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVR83_RS03545 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVR83_RS03550 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVR83_RS03550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVR83_RS03555 PF00005 ABC transporter AVR83_RS03560 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS03570 PF00106 short chain dehydrogenase AVR83_RS03575 PF01156 Inosine-uridine preferring nucleoside hydrolase AVR83_RS03600 PF01161 Phosphatidylethanolamine-binding protein AVR83_RS03605 PF06993 Protein of unknown function (DUF1304) AVR83_RS03610 PF07731 Multicopper oxidase AVR83_RS03610 PF07732 Multicopper oxidase AVR83_RS03615 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AVR83_RS03630 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVR83_RS03630 PF00056 lactate/malate dehydrogenase, NAD binding domain AVR83_RS03635 PF00909 Ammonium Transporter Family AVR83_RS03640 PF07690 Major Facilitator Superfamily AVR83_RS03655 PF00005 ABC transporter AVR83_RS03660 PF01061 ABC-2 type transporter AVR83_RS03670 PF00155 Aminotransferase class I and II AVR83_RS03685 PF02632 BioY family AVR83_RS03695 PF03577 Peptidase family C69 AVR83_RS03720 PF01116 Fructose-bisphosphate aldolase class-II AVR83_RS03725 PF00171 Aldehyde dehydrogenase family AVR83_RS03725 PF00465 Iron-containing alcohol dehydrogenase AVR83_RS03735 PF00005 ABC transporter AVR83_RS03740 PF00392 Bacterial regulatory proteins, gntR family AVR83_RS03770 PF08402 TOBE domain AVR83_RS03770 PF00005 ABC transporter AVR83_RS03785 PF13416 Bacterial extracellular solute-binding protein AVR83_RS03810 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVR83_RS03815 PF01047 MarR family AVR83_RS03825 PF00871 Acetokinase family AVR83_RS03855 PF01476 LysM domain AVR83_RS03855 PF05257 CHAP domain AVR83_RS03860 PF06737 Transglycosylase-like domain AVR83_RS03875 PF00005 ABC transporter AVR83_RS03880 PF02687 FtsX-like permease family AVR83_RS03880 PF12704 MacB-like periplasmic core domain AVR83_RS03890 PF03352 Methyladenine glycosylase AVR83_RS03895 PF03176 MMPL family AVR83_RS03905 PF04607 Region found in RelA / SpoT proteins AVR83_RS03915 PF01565 FAD binding domain AVR83_RS03915 PF02913 FAD linked oxidases, C-terminal domain AVR83_RS03920 PF03816 Cell envelope-related transcriptional attenuator domain AVR83_RS03935 PF02378 Phosphotransferase system, EIIC AVR83_RS03940 PF01380 SIS domain AVR83_RS03940 PF01418 Helix-turn-helix domain, rpiR family AVR83_RS03950 PF00072 Response regulator receiver domain AVR83_RS03950 PF00486 Transcriptional regulatory protein, C terminal AVR83_RS03955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVR83_RS03955 PF18719 ArlS sensor domain AVR83_RS03955 PF00512 His Kinase A (phospho-acceptor) domain AVR83_RS03965 PF07690 Major Facilitator Superfamily AVR83_RS03985 PF01566 Natural resistance-associated macrophage protein AVR83_RS03990 PF00440 Bacterial regulatory proteins, tetR family AVR83_RS03995 PF02082 Transcriptional regulator AVR83_RS04005 PF02441 Flavoprotein AVR83_RS04015 PF00367 phosphotransferase system, EIIB AVR83_RS04015 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AVR83_RS04015 PF02378 Phosphotransferase system, EIIC AVR83_RS04020 PF02378 Phosphotransferase system, EIIC AVR83_RS04020 PF00367 phosphotransferase system, EIIB AVR83_RS04020 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AVR83_RS04025 PF16657 Maltogenic Amylase, C-terminal domain AVR83_RS04025 PF00128 Alpha amylase, catalytic domain AVR83_RS04030 PF07702 UTRA domain AVR83_RS04030 PF00392 Bacterial regulatory proteins, gntR family AVR83_RS04050 PF00557 Metallopeptidase family M24 AVR83_RS04055 PF00291 Pyridoxal-phosphate dependent enzyme AVR83_RS04060 PF01053 Cys/Met metabolism PLP-dependent enzyme AVR83_RS04065 PF00132 Bacterial transferase hexapeptide (six repeats) AVR83_RS04080 PF03841 L-seryl-tRNA selenium transferase AVR83_RS04085 PF01979 Amidohydrolase family AVR83_RS04100 PF02378 Phosphotransferase system, EIIC AVR83_RS04105 PF07702 UTRA domain AVR83_RS04105 PF00392 Bacterial regulatory proteins, gntR family AVR83_RS04110 PF03358 NADPH-dependent FMN reductase AVR83_RS04120 PF00334 Nucleoside diphosphate kinase AVR83_RS04145 PF00085 Thioredoxin AVR83_RS04155 PF08125 Mannitol dehydrogenase C-terminal domain AVR83_RS04155 PF01232 Mannitol dehydrogenase Rossmann domain AVR83_RS04160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AVR83_RS04170 PF02378 Phosphotransferase system, EIIC AVR83_RS04170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AVR83_RS04175 PF03577 Peptidase family C69 AVR83_RS04180 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AVR83_RS04195 PF03449 Transcription elongation factor, N-terminal AVR83_RS04195 PF01272 Transcription elongation factor, GreA/GreB, C-term AVR83_RS04200 PF00248 Aldo/keto reductase family AVR83_RS04205 PF00255 Glutathione peroxidase AVR83_RS04215 PF00005 ABC transporter AVR83_RS04225 PF12848 ABC transporter AVR83_RS04225 PF00005 ABC transporter AVR83_RS04230 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AVR83_RS04235 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AVR83_RS04245 PF00871 Acetokinase family AVR83_RS04250 PF05670 NFACT protein RNA binding domain AVR83_RS04265 PF00248 Aldo/keto reductase family AVR83_RS04270 PF00300 Histidine phosphatase superfamily (branch 1) AVR83_RS04275 PF00266 Aminotransferase class-V AVR83_RS04280 PF01842 ACT domain AVR83_RS04280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVR83_RS04280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVR83_RS04290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVR83_RS04310 PF03466 LysR substrate binding domain AVR83_RS04310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVR83_RS04315 PF00128 Alpha amylase, catalytic domain AVR83_RS04320 PF03553 Na+/H+ antiporter family AVR83_RS04330 PF00128 Alpha amylase, catalytic domain AVR83_RS04335 PF00356 Bacterial regulatory proteins, lacI family AVR83_RS04340 PF00251 Glycosyl hydrolases family 32 N-terminal domain AVR83_RS04340 PF08244 Glycosyl hydrolases family 32 C terminal AVR83_RS04345 PF02378 Phosphotransferase system, EIIC AVR83_RS04345 PF00367 phosphotransferase system, EIIB AVR83_RS04345 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AVR83_RS04350 PF00480 ROK family AVR83_RS04365 PF03636 Glycosyl hydrolase family 65, N-terminal domain AVR83_RS04365 PF03633 Glycosyl hydrolase family 65, C-terminal domain AVR83_RS04365 PF03632 Glycosyl hydrolase family 65 central catalytic domain AVR83_RS04370 PF00005 ABC transporter AVR83_RS04370 PF17912 MalK OB fold domain AVR83_RS04370 PF03459 TOBE domain AVR83_RS04375 PF00128 Alpha amylase, catalytic domain AVR83_RS04375 PF11896 Domain of unknown function (DUF3416) AVR83_RS04385 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS04390 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS04395 PF13416 Bacterial extracellular solute-binding protein AVR83_RS04400 PF00128 Alpha amylase, catalytic domain AVR83_RS04405 PF00356 Bacterial regulatory proteins, lacI family AVR83_RS04410 PF00356 Bacterial regulatory proteins, lacI family AVR83_RS04415 PF00230 Major intrinsic protein AVR83_RS04420 PF03610 PTS system fructose IIA component AVR83_RS04425 PF02734 DAK2 domain AVR83_RS04430 PF02733 Dak1 domain AVR83_RS04435 PF02733 Dak1 domain AVR83_RS04440 PF14278 Transcriptional regulator C-terminal region AVR83_RS04440 PF00440 Bacterial regulatory proteins, tetR family AVR83_RS04445 PF12822 ECF transporter, substrate-specific component AVR83_RS04450 PF00766 Electron transfer flavoprotein FAD-binding domain AVR83_RS04450 PF01012 Electron transfer flavoprotein domain AVR83_RS04465 PF13732 Domain of unknown function (DUF4162) AVR83_RS04465 PF00005 ABC transporter AVR83_RS04470 PF00106 short chain dehydrogenase AVR83_RS04495 PF07702 UTRA domain AVR83_RS04495 PF00392 Bacterial regulatory proteins, gntR family AVR83_RS04500 PF07155 ECF-type riboflavin transporter, S component AVR83_RS04505 PF12558 ATP-binding cassette cobalt transporter AVR83_RS04505 PF00005 ABC transporter AVR83_RS04510 PF02361 Cobalt transport protein AVR83_RS04515 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AVR83_RS04530 PF06100 MCRA family AVR83_RS04540 PF00248 Aldo/keto reductase family AVR83_RS04545 PF00248 Aldo/keto reductase family AVR83_RS04550 PF07690 Major Facilitator Superfamily AVR83_RS04560 PF07690 Major Facilitator Superfamily AVR83_RS04560 PF00083 Sugar (and other) transporter AVR83_RS04575 PF00011 Hsp20/alpha crystallin family AVR83_RS04590 PF04024 PspC domain AVR83_RS04595 PF01048 Phosphorylase superfamily AVR83_RS04600 PF00689 Cation transporting ATPase, C-terminus AVR83_RS04600 PF00690 Cation transporter/ATPase, N-terminus AVR83_RS04605 PF00561 alpha/beta hydrolase fold AVR83_RS04615 PF00324 Amino acid permease AVR83_RS04620 PF13344 Haloacid dehalogenase-like hydrolase AVR83_RS04620 PF00293 NUDIX domain AVR83_RS04630 PF07722 Peptidase C26 AVR83_RS04640 PF02581 Thiamine monophosphate synthase AVR83_RS04645 PF08543 Phosphomethylpyrimidine kinase AVR83_RS04650 PF02110 Hydroxyethylthiazole kinase family AVR83_RS04655 PF00107 Zinc-binding dehydrogenase AVR83_RS04655 PF08240 Alcohol dehydrogenase GroES-like domain AVR83_RS04660 PF02540 NAD synthase AVR83_RS04665 PF00230 Major intrinsic protein AVR83_RS04670 PF01969 Protein of unknown function DUF111 AVR83_RS04675 PF01969 Protein of unknown function DUF111 AVR83_RS04680 PF00731 AIR carboxylase AVR83_RS04685 PF09861 Lactate racemase N-terminal domain AVR83_RS04690 PF13545 Crp-like helix-turn-helix domain AVR83_RS04695 PF01891 Cobalt uptake substrate-specific transmembrane region AVR83_RS04695 PF13190 PDGLE domain AVR83_RS04700 PF02361 Cobalt transport protein AVR83_RS04705 PF00005 ABC transporter AVR83_RS04730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVR83_RS04740 PF03883 Peroxide stress protein YaaA AVR83_RS04745 PF00561 alpha/beta hydrolase fold AVR83_RS04760 PF00107 Zinc-binding dehydrogenase AVR83_RS04760 PF08240 Alcohol dehydrogenase GroES-like domain AVR83_RS04790 PF00679 Elongation factor G C-terminus AVR83_RS04790 PF03764 Elongation factor G, domain IV AVR83_RS04790 PF14492 Elongation Factor G, domain II AVR83_RS04790 PF00009 Elongation factor Tu GTP binding domain AVR83_RS04795 PF02525 Flavodoxin-like fold AVR83_RS04815 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AVR83_RS04815 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AVR83_RS04820 PF13350 Tyrosine phosphatase family AVR83_RS04830 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family AVR83_RS04835 PF13419 Haloacid dehalogenase-like hydrolase AVR83_RS04840 PF13556 PucR C-terminal helix-turn-helix domain AVR83_RS04840 PF17853 GGDEF-like domain AVR83_RS04840 PF07905 Purine catabolism regulatory protein-like family AVR83_RS04845 PF00881 Nitroreductase family AVR83_RS04860 PF01451 Low molecular weight phosphotyrosine protein phosphatase AVR83_RS04875 PF00939 Sodium:sulfate symporter transmembrane region AVR83_RS04880 PF04205 FMN-binding domain AVR83_RS04880 PF00890 FAD binding domain AVR83_RS04880 PF03358 NADPH-dependent FMN reductase AVR83_RS04900 PF03167 Uracil DNA glycosylase superfamily AVR83_RS04905 PF00171 Aldehyde dehydrogenase family AVR83_RS04915 PF02590 Predicted SPOUT methyltransferase AVR83_RS04920 PF13180 PDZ domain AVR83_RS04925 PF00753 Metallo-beta-lactamase superfamily AVR83_RS04930 PF09648 YycH protein AVR83_RS04940 PF14827 Double sensory domain of two-component sensor kinase AVR83_RS04940 PF00672 HAMP domain AVR83_RS04940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVR83_RS04940 PF00512 His Kinase A (phospho-acceptor) domain AVR83_RS04940 PF13426 PAS domain AVR83_RS04945 PF00486 Transcriptional regulatory protein, C terminal AVR83_RS04945 PF00072 Response regulator receiver domain AVR83_RS04955 PF01209 ubiE/COQ5 methyltransferase family AVR83_RS04980 PF04860 Phage portal protein AVR83_RS05040 PF01381 Helix-turn-helix AVR83_RS05055 PF00313 'Cold-shock' DNA-binding domain AVR83_RS05065 PF03636 Glycosyl hydrolase family 65, N-terminal domain AVR83_RS05065 PF03632 Glycosyl hydrolase family 65 central catalytic domain AVR83_RS05065 PF03633 Glycosyl hydrolase family 65, C-terminal domain AVR83_RS05070 PF13419 Haloacid dehalogenase-like hydrolase AVR83_RS05080 PF02903 Alpha amylase, N-terminal ig-like domain AVR83_RS05080 PF00128 Alpha amylase, catalytic domain AVR83_RS05085 PF00343 Carbohydrate phosphorylase AVR83_RS05090 PF00534 Glycosyl transferases group 1 AVR83_RS05090 PF08323 Starch synthase catalytic domain AVR83_RS05095 PF00483 Nucleotidyl transferase AVR83_RS05100 PF00483 Nucleotidyl transferase AVR83_RS05105 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AVR83_RS05105 PF02806 Alpha amylase, C-terminal all-beta domain AVR83_RS05105 PF00128 Alpha amylase, catalytic domain AVR83_RS05115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVR83_RS05120 PF00171 Aldehyde dehydrogenase family AVR83_RS05125 PF00696 Amino acid kinase family AVR83_RS05130 PF07690 Major Facilitator Superfamily AVR83_RS05135 PF03796 DnaB-like helicase C terminal domain AVR83_RS05135 PF00772 DnaB-like helicase N terminal domain AVR83_RS05140 PF01281 Ribosomal protein L9, N-terminal domain AVR83_RS05140 PF03948 Ribosomal protein L9, C-terminal domain AVR83_RS05145 PF02272 DHHA1 domain AVR83_RS05145 PF01368 DHH family AVR83_RS05150 PF01084 Ribosomal protein S18 AVR83_RS05155 PF00436 Single-strand binding protein family AVR83_RS05160 PF01250 Ribosomal protein S6 AVR83_RS05165 PF00521 DNA gyrase/topoisomerase IV, subunit A AVR83_RS05165 PF03989 DNA gyrase C-terminal domain, beta-propeller AVR83_RS05170 PF01751 Toprim domain AVR83_RS05170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVR83_RS05170 PF00204 DNA gyrase B AVR83_RS05170 PF00986 DNA gyrase B subunit, carboxyl terminus AVR83_RS05175 PF02463 RecF/RecN/SMC N terminal domain AVR83_RS05185 PF00712 DNA polymerase III beta subunit, N-terminal domain AVR83_RS05185 PF02767 DNA polymerase III beta subunit, central domain AVR83_RS05185 PF02768 DNA polymerase III beta subunit, C-terminal domain AVR83_RS05190 PF00308 Bacterial dnaA protein AVR83_RS05190 PF08299 Bacterial dnaA protein helix-turn-helix AVR83_RS05190 PF11638 DnaA N-terminal domain AVR83_RS05195 PF00825 Ribonuclease P AVR83_RS05200 PF02096 60Kd inner membrane protein AVR83_RS05205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVR83_RS05210 PF01979 Amidohydrolase family AVR83_RS05215 PF01424 R3H domain AVR83_RS05215 PF14804 Jag N-terminus AVR83_RS05220 PF10396 GTP-binding protein TrmE N-terminus AVR83_RS05220 PF01926 50S ribosome-binding GTPase AVR83_RS05220 PF12631 MnmE helical domain AVR83_RS05225 PF01134 Glucose inhibited division protein A AVR83_RS05225 PF13932 GidA associated domain AVR83_RS05250 PF10502 Signal peptidase, peptidase S26 AVR83_RS05255 PF03051 Peptidase C1-like family AVR83_RS05265 PF02645 Uncharacterised protein, DegV family COG1307 AVR83_RS05280 PF05870 Phenolic acid decarboxylase (PAD) AVR83_RS05285 PF03551 Transcriptional regulator PadR-like family AVR83_RS05285 PF10400 Virulence activator alpha C-term AVR83_RS05295 PF00465 Iron-containing alcohol dehydrogenase AVR83_RS05295 PF00171 Aldehyde dehydrogenase family AVR83_RS05300 PF00356 Bacterial regulatory proteins, lacI family AVR83_RS05305 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AVR83_RS05305 PF00294 pfkB family carbohydrate kinase AVR83_RS05310 PF05025 RbsD / FucU transport protein family AVR83_RS05315 PF06800 Sugar transport protein AVR83_RS05320 PF00106 short chain dehydrogenase AVR83_RS05335 PF03608 PTS system enzyme II sorbitol-specific factor AVR83_RS05340 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AVR83_RS05340 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AVR83_RS05350 PF13556 PucR C-terminal helix-turn-helix domain AVR83_RS05355 PF00392 Bacterial regulatory proteins, gntR family AVR83_RS05355 PF07702 UTRA domain AVR83_RS05360 PF00005 ABC transporter AVR83_RS05360 PF00664 ABC transporter transmembrane region AVR83_RS05365 PF00664 ABC transporter transmembrane region AVR83_RS05365 PF00005 ABC transporter AVR83_RS05370 PF12833 Helix-turn-helix domain AVR83_RS05370 PF01497 Periplasmic binding protein AVR83_RS05380 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS05385 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS05390 PF12010 Domain of unknown function (DUF3502) AVR83_RS05395 PF16657 Maltogenic Amylase, C-terminal domain AVR83_RS05395 PF00128 Alpha amylase, catalytic domain AVR83_RS05405 PF06580 Histidine kinase AVR83_RS05405 PF00672 HAMP domain AVR83_RS05405 PF02743 Cache domain AVR83_RS05405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVR83_RS05410 PF12833 Helix-turn-helix domain AVR83_RS05410 PF00072 Response regulator receiver domain AVR83_RS05415 PF00480 ROK family AVR83_RS05420 PF03459 TOBE domain AVR83_RS05420 PF17912 MalK OB fold domain AVR83_RS05420 PF00005 ABC transporter AVR83_RS05430 PF00392 Bacterial regulatory proteins, gntR family AVR83_RS05430 PF07702 UTRA domain AVR83_RS05440 PF09261 Alpha mannosidase middle domain AVR83_RS05440 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 AVR83_RS05440 PF07748 Glycosyl hydrolases family 38 C-terminal domain AVR83_RS05440 PF01074 Glycosyl hydrolases family 38 N-terminal domain AVR83_RS05440 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain AVR83_RS05445 PF00480 ROK family AVR83_RS05450 PF00232 Glycosyl hydrolase family 1 AVR83_RS05480 PF12833 Helix-turn-helix domain AVR83_RS05550 PF08220 DeoR-like helix-turn-helix domain AVR83_RS05550 PF00455 DeoR C terminal sensor domain AVR83_RS05555 PF12833 Helix-turn-helix domain AVR83_RS05555 PF17853 GGDEF-like domain AVR83_RS05560 PF07690 Major Facilitator Superfamily AVR83_RS05565 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVR83_RS05565 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVR83_RS05570 PF05336 L-rhamnose mutarotase AVR83_RS05575 PF06134 L-rhamnose isomerase (RhaA) AVR83_RS05580 PF00596 Class II Aldolase and Adducin N-terminal domain AVR83_RS05595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVR83_RS05595 PF00205 Thiamine pyrophosphate enzyme, central domain AVR83_RS05595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVR83_RS05600 PF02082 Transcriptional regulator AVR83_RS05605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVR83_RS05605 PF00205 Thiamine pyrophosphate enzyme, central domain AVR83_RS05605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVR83_RS05610 PF01070 FMN-dependent dehydrogenase AVR83_RS05620 PF10431 C-terminal, D2-small domain, of ClpB protein AVR83_RS05620 PF07724 AAA domain (Cdc48 subfamily) AVR83_RS05620 PF00004 ATPase family associated with various cellular activities (AAA) AVR83_RS05620 PF17871 AAA lid domain AVR83_RS05625 PF04647 Accessory gene regulator B AVR83_RS05640 PF04397 LytTr DNA-binding domain AVR83_RS05640 PF00072 Response regulator receiver domain AVR83_RS05645 PF03960 ArsC family AVR83_RS05650 PF00199 Catalase AVR83_RS05650 PF06628 Catalase-related immune-responsive AVR83_RS05655 PF04226 Transglycosylase associated protein AVR83_RS05670 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVR83_RS05670 PF14759 Reductase C-terminal AVR83_RS05675 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AVR83_RS05680 PF00701 Dihydrodipicolinate synthetase family AVR83_RS05685 PF00480 ROK family AVR83_RS05695 PF00999 Sodium/hydrogen exchanger family AVR83_RS05700 PF00474 Sodium:solute symporter family AVR83_RS05720 PF01380 SIS domain AVR83_RS05720 PF01418 Helix-turn-helix domain, rpiR family AVR83_RS05725 PF00392 Bacterial regulatory proteins, gntR family AVR83_RS05730 PF00083 Sugar (and other) transporter AVR83_RS05740 PF00596 Class II Aldolase and Adducin N-terminal domain AVR83_RS05745 PF02610 L-arabinose isomerase AVR83_RS05745 PF11762 L-arabinose isomerase C-terminal domain AVR83_RS05750 PF14602 Hexapeptide repeat of succinyl-transferase AVR83_RS05750 PF12464 Maltose acetyltransferase AVR83_RS05760 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase AVR83_RS05760 PF09363 XFP C-terminal domain AVR83_RS05760 PF09364 XFP N-terminal domain AVR83_RS05765 PF00455 DeoR C terminal sensor domain AVR83_RS05765 PF08220 DeoR-like helix-turn-helix domain AVR83_RS05775 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AVR83_RS05780 PF03611 PTS system sugar-specific permease component AVR83_RS05785 PF08240 Alcohol dehydrogenase GroES-like domain AVR83_RS05785 PF00107 Zinc-binding dehydrogenase AVR83_RS05795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AVR83_RS05795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AVR83_RS05795 PF08279 HTH domain AVR83_RS05795 PF00874 PRD domain AVR83_RS05795 PF05043 Mga helix-turn-helix domain AVR83_RS05810 PF03611 PTS system sugar-specific permease component AVR83_RS05815 PF00923 Transaldolase/Fructose-6-phosphate aldolase AVR83_RS05820 PF00456 Transketolase, thiamine diphosphate binding domain AVR83_RS05820 PF02779 Transketolase, pyrimidine binding domain AVR83_RS05820 PF02780 Transketolase, C-terminal domain AVR83_RS05830 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family AVR83_RS05840 PF16338 Domain of unknown function (DUF4968) AVR83_RS05840 PF01055 Glycosyl hydrolases family 31 AVR83_RS05840 PF13802 Galactose mutarotase-like AVR83_RS05840 PF17137 Domain of unknown function (DUF5110) AVR83_RS05850 PF00356 Bacterial regulatory proteins, lacI family AVR83_RS05855 PF03633 Glycosyl hydrolase family 65, C-terminal domain AVR83_RS05855 PF03632 Glycosyl hydrolase family 65 central catalytic domain AVR83_RS05855 PF03636 Glycosyl hydrolase family 65, N-terminal domain AVR83_RS05865 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AVR83_RS05865 PF00367 phosphotransferase system, EIIB AVR83_RS05865 PF02378 Phosphotransferase system, EIIC AVR83_RS05870 PF00232 Glycosyl hydrolase family 1 AVR83_RS05875 PF00232 Glycosyl hydrolase family 1 AVR83_RS05880 PF03123 CAT RNA binding domain AVR83_RS05880 PF00874 PRD domain AVR83_RS05885 PF02378 Phosphotransferase system, EIIC AVR83_RS05885 PF00367 phosphotransferase system, EIIB AVR83_RS05885 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AVR83_RS05890 PF00232 Glycosyl hydrolase family 1 AVR83_RS05900 PF01869 BadF/BadG/BcrA/BcrD ATPase family AVR83_RS05905 PF13580 SIS domain AVR83_RS05910 PF02378 Phosphotransferase system, EIIC AVR83_RS05915 PF00392 Bacterial regulatory proteins, gntR family AVR83_RS05915 PF07702 UTRA domain AVR83_RS05920 PF12697 Alpha/beta hydrolase family AVR83_RS05930 PF07690 Major Facilitator Superfamily AVR83_RS05935 PF03466 LysR substrate binding domain AVR83_RS05935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVR83_RS05950 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AVR83_RS05950 PF08501 Shikimate dehydrogenase substrate binding domain AVR83_RS05955 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AVR83_RS05955 PF08501 Shikimate dehydrogenase substrate binding domain AVR83_RS05960 PF07690 Major Facilitator Superfamily AVR83_RS05965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVR83_RS05965 PF03466 LysR substrate binding domain AVR83_RS05970 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AVR83_RS05970 PF08501 Shikimate dehydrogenase substrate binding domain AVR83_RS05975 PF01487 Type I 3-dehydroquinase AVR83_RS05980 PF02424 ApbE family AVR83_RS05985 PF03358 NADPH-dependent FMN reductase AVR83_RS05985 PF04205 FMN-binding domain AVR83_RS05985 PF00890 FAD binding domain AVR83_RS05995 PF00248 Aldo/keto reductase family AVR83_RS06000 PF00356 Bacterial regulatory proteins, lacI family AVR83_RS06005 PF01263 Aldose 1-epimerase AVR83_RS06010 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AVR83_RS06015 PF16874 Glycosyl hydrolase family 36 C-terminal domain AVR83_RS06015 PF16875 Glycosyl hydrolase family 36 N-terminal domain AVR83_RS06020 PF02929 Beta galactosidase small chain AVR83_RS06025 PF02837 Glycosyl hydrolases family 2, sugar binding domain AVR83_RS06025 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AVR83_RS06025 PF00703 Glycosyl hydrolases family 2 AVR83_RS06030 PF00288 GHMP kinases N terminal domain AVR83_RS06030 PF10509 Galactokinase galactose-binding signature AVR83_RS06030 PF08544 GHMP kinases C terminal AVR83_RS06035 PF16363 GDP-mannose 4,6 dehydratase AVR83_RS06040 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AVR83_RS06040 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AVR83_RS06045 PF00356 Bacterial regulatory proteins, lacI family AVR83_RS06050 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA AVR83_RS06055 PF18543 Intracellular delivery domain AVR83_RS06055 PF02661 Fic/DOC family AVR83_RS06075 PF07690 Major Facilitator Superfamily AVR83_RS06085 PF00356 Bacterial regulatory proteins, lacI family AVR83_RS06090 PF08533 Beta-galactosidase C-terminal domain AVR83_RS06090 PF08532 Beta-galactosidase trimerisation domain AVR83_RS06090 PF02449 Beta-galactosidase AVR83_RS06095 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AVR83_RS06100 PF05525 Branched-chain amino acid transport protein AVR83_RS06105 PF03109 ABC1 family AVR83_RS06110 PF00230 Major intrinsic protein AVR83_RS06160 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVR83_RS06160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVR83_RS06175 PF01431 Peptidase family M13 AVR83_RS06175 PF05649 Peptidase family M13 AVR83_RS06180 PF00027 Cyclic nucleotide-binding domain AVR83_RS06180 PF13545 Crp-like helix-turn-helix domain AVR83_RS06200 PF02583 Metal-sensitive transcriptional repressor AVR83_RS06205 PF00085 Thioredoxin AVR83_RS06210 PF00230 Major intrinsic protein AVR83_RS06215 PF00403 Heavy-metal-associated domain AVR83_RS06230 PF01209 ubiE/COQ5 methyltransferase family AVR83_RS06275 PF00877 NlpC/P60 family AVR83_RS06280 PF00282 Pyridoxal-dependent decarboxylase conserved domain AVR83_RS06305 PF12833 Helix-turn-helix domain AVR83_RS06340 PF01661 Macro domain AVR83_RS06345 PF02673 Bacitracin resistance protein BacA AVR83_RS06365 PF00248 Aldo/keto reductase family AVR83_RS06375 PF00149 Calcineurin-like phosphoesterase AVR83_RS06375 PF02872 5'-nucleotidase, C-terminal domain AVR83_RS06380 PF00690 Cation transporter/ATPase, N-terminus AVR83_RS06380 PF00689 Cation transporting ATPase, C-terminus AVR83_RS06400 PF00083 Sugar (and other) transporter AVR83_RS06400 PF07690 Major Facilitator Superfamily AVR83_RS06425 PF07690 Major Facilitator Superfamily AVR83_RS06440 PF03965 Penicillinase repressor AVR83_RS06450 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family AVR83_RS06465 PF00892 EamA-like transporter family AVR83_RS06485 PF00011 Hsp20/alpha crystallin family AVR83_RS06500 PF14815 NUDIX domain AVR83_RS06500 PF00730 HhH-GPD superfamily base excision DNA repair protein AVR83_RS06510 PF04343 Protein of unknown function, DUF488 AVR83_RS06515 PF03960 ArsC family AVR83_RS06530 PF04608 Phosphatidylglycerophosphatase A AVR83_RS06540 PF00324 Amino acid permease AVR83_RS06545 PF03553 Na+/H+ antiporter family AVR83_RS06560 PF01380 SIS domain AVR83_RS06565 PF01979 Amidohydrolase family AVR83_RS06565 PF13382 Adenine deaminase C-terminal domain AVR83_RS06575 PF04237 YjbR AVR83_RS06585 PF00403 Heavy-metal-associated domain AVR83_RS06590 PF02028 BCCT, betaine/carnitine/choline family transporter AVR83_RS06615 PF00248 Aldo/keto reductase family AVR83_RS06620 PF01883 Iron-sulfur cluster assembly protein AVR83_RS06630 PF04055 Radical SAM superfamily AVR83_RS06635 PF02901 Pyruvate formate lyase-like AVR83_RS06635 PF01228 Glycine radical AVR83_RS06640 PF00144 Beta-lactamase AVR83_RS06670 PF07690 Major Facilitator Superfamily AVR83_RS06675 PF01297 Zinc-uptake complex component A periplasmic AVR83_RS06690 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AVR83_RS06695 PF01227 GTP cyclohydrolase I AVR83_RS06700 PF02875 Mur ligase family, glutamate ligase domain AVR83_RS06700 PF08245 Mur ligase middle domain AVR83_RS06705 PF01725 Ham1 family AVR83_RS06710 PF00809 Pterin binding enzyme AVR83_RS06730 PF01545 Cation efflux family AVR83_RS06735 PF01022 Bacterial regulatory protein, arsR family AVR83_RS06740 PF03006 Haemolysin-III related AVR83_RS06745 PF00893 Small Multidrug Resistance protein AVR83_RS06750 PF00893 Small Multidrug Resistance protein AVR83_RS06755 PF01717 Cobalamin-independent synthase, Catalytic domain AVR83_RS06760 PF01594 AI-2E family transporter AVR83_RS06775 PF02705 K+ potassium transporter AVR83_RS06780 PF13520 Amino acid permease AVR83_RS06790 PF13091 PLD-like domain AVR83_RS06790 PF13396 Phospholipase_D-nuclease N-terminal AVR83_RS06795 PF13350 Tyrosine phosphatase family AVR83_RS06800 PF00478 IMP dehydrogenase / GMP reductase domain AVR83_RS06805 PF00709 Adenylosuccinate synthetase AVR83_RS06810 PF10397 Adenylosuccinate lyase C-terminus AVR83_RS06810 PF00206 Lyase AVR83_RS06820 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVR83_RS06820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVR83_RS06825 PF02595 Glycerate kinase family AVR83_RS06840 PF01593 Flavin containing amine oxidoreductase AVR83_RS06845 PF04298 Putative neutral zinc metallopeptidase AVR83_RS06850 PF02645 Uncharacterised protein, DegV family COG1307 AVR83_RS06855 PF04172 LrgB-like family AVR83_RS06860 PF03788 LrgA family AVR83_RS06880 PF08951 Enterocin A Immunity AVR83_RS06885 PF01475 Ferric uptake regulator family AVR83_RS06900 PF03358 NADPH-dependent FMN reductase AVR83_RS06900 PF04205 FMN-binding domain AVR83_RS06900 PF00890 FAD binding domain AVR83_RS06915 PF00367 phosphotransferase system, EIIB AVR83_RS06915 PF02378 Phosphotransferase system, EIIC AVR83_RS06915 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AVR83_RS06930 PF08279 HTH domain AVR83_RS06930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AVR83_RS06930 PF05043 Mga helix-turn-helix domain AVR83_RS06930 PF00874 PRD domain AVR83_RS06935 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AVR83_RS06935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AVR83_RS06940 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AVR83_RS06945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AVR83_RS06945 PF02378 Phosphotransferase system, EIIC AVR83_RS06945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AVR83_RS06950 PF01074 Glycosyl hydrolases family 38 N-terminal domain AVR83_RS06950 PF09261 Alpha mannosidase middle domain AVR83_RS06950 PF07748 Glycosyl hydrolases family 38 C-terminal domain AVR83_RS06955 PF00480 ROK family AVR83_RS06975 PF01938 TRAM domain AVR83_RS06975 PF05958 tRNA (Uracil-5-)-methyltransferase AVR83_RS06980 PF00005 ABC transporter AVR83_RS06985 PF03649 Uncharacterised protein family (UPF0014) AVR83_RS07000 PF00356 Bacterial regulatory proteins, lacI family AVR83_RS07005 PF00128 Alpha amylase, catalytic domain AVR83_RS07010 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AVR83_RS07010 PF00367 phosphotransferase system, EIIB AVR83_RS07010 PF02378 Phosphotransferase system, EIIC AVR83_RS07035 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVR83_RS07040 PF00005 ABC transporter AVR83_RS07045 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS07050 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVR83_RS07055 PF00155 Aminotransferase class I and II AVR83_RS07060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVR83_RS07060 PF03466 LysR substrate binding domain AVR83_RS07075 PF01773 Na+ dependent nucleoside transporter N-terminus AVR83_RS07075 PF07662 Na+ dependent nucleoside transporter C-terminus AVR83_RS07080 PF02527 rRNA small subunit methyltransferase G AVR83_RS07085 PF02195 ParB-like nuclease domain AVR83_RS07085 PF17762 HTH domain found in ParB protein AVR83_RS07090 PF13614 AAA domain AVR83_RS07095 PF17762 HTH domain found in ParB protein AVR83_RS07095 PF02195 ParB-like nuclease domain AVR83_RS07100 PF06107 Bacterial protein of unknown function (DUF951) AVR83_RS07105 PF01926 50S ribosome-binding GTPase AVR83_RS07105 PF06071 Protein of unknown function (DUF933) AVR83_RS07120 PF00478 IMP dehydrogenase / GMP reductase domain AVR83_RS07120 PF00571 CBS domain AVR83_RS07135 PF00072 Response regulator receiver domain AVR83_RS07135 PF00486 Transcriptional regulatory protein, C terminal AVR83_RS07140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVR83_RS07140 PF00512 His Kinase A (phospho-acceptor) domain AVR83_RS07145 PF07943 Penicillin-binding protein 5, C-terminal domain AVR83_RS07145 PF00768 D-alanyl-D-alanine carboxypeptidase AVR83_RS07150 PF00583 Acetyltransferase (GNAT) family AVR83_RS07190 PF00069 Protein kinase domain AVR83_RS07190 PF03793 PASTA domain AVR83_RS07210 PF00480 ROK family AVR83_RS07215 PF01594 AI-2E family transporter AVR83_RS07220 PF00300 Histidine phosphatase superfamily (branch 1) AVR83_RS07250 PF07690 Major Facilitator Superfamily AVR83_RS07255 PF13577 SnoaL-like domain AVR83_RS07265 PF00248 Aldo/keto reductase family AVR83_RS07270 PF03734 L,D-transpeptidase catalytic domain AVR83_RS07280 PF02615 Malate/L-lactate dehydrogenase AVR83_RS07290 PF02687 FtsX-like permease family AVR83_RS07290 PF12704 MacB-like periplasmic core domain AVR83_RS07290 PF00005 ABC transporter AVR83_RS07305 PF01965 DJ-1/PfpI family AVR83_RS07325 PF13411 MerR HTH family regulatory protein AVR83_RS07345 PF02378 Phosphotransferase system, EIIC AVR83_RS07350 PF00232 Glycosyl hydrolase family 1 AVR83_RS07360 PF00210 Ferritin-like domain AVR83_RS07370 PF14537 Cytochrome c3 AVR83_RS07370 PF00890 FAD binding domain AVR83_RS07380 PF00293 NUDIX domain AVR83_RS07380 PF09297 NADH pyrophosphatase zinc ribbon domain AVR83_RS07390 PF06421 GTP-binding protein LepA C-terminus AVR83_RS07390 PF00009 Elongation factor Tu GTP binding domain AVR83_RS07390 PF00679 Elongation factor G C-terminus AVR83_RS07400 PF06458 MucBP domain AVR83_RS07430 PF14602 Hexapeptide repeat of succinyl-transferase AVR83_RS07430 PF12464 Maltose acetyltransferase AVR83_RS07435 PF00106 short chain dehydrogenase AVR83_RS07445 PF00440 Bacterial regulatory proteins, tetR family AVR83_RS07450 PF01032 FecCD transport family AVR83_RS07455 PF01032 FecCD transport family AVR83_RS07460 PF00005 ABC transporter AVR83_RS07465 PF01497 Periplasmic binding protein AVR83_RS07475 PF07690 Major Facilitator Superfamily AVR83_RS07480 PF00248 Aldo/keto reductase family AVR83_RS07485 PF06736 Protein of unknown function (DUF1211) AVR83_RS07500 PF00106 short chain dehydrogenase AVR83_RS07505 PF01638 HxlR-like helix-turn-helix AVR83_RS07520 PF00171 Aldehyde dehydrogenase family AVR83_RS07530 PF00440 Bacterial regulatory proteins, tetR family AVR83_RS07530 PF08359 YsiA-like protein, C-terminal region AVR83_RS07545 PF04397 LytTr DNA-binding domain AVR83_RS07545 PF00072 Response regulator receiver domain AVR83_RS07550 PF13537 Glutamine amidotransferase domain AVR83_RS07550 PF00733 Asparagine synthase AVR83_RS07560 PF07690 Major Facilitator Superfamily AVR83_RS07565 PF01638 HxlR-like helix-turn-helix AVR83_RS07570 PF13419 Haloacid dehalogenase-like hydrolase AVR83_RS07580 PF06458 MucBP domain AVR83_RS07610 PF08240 Alcohol dehydrogenase GroES-like domain AVR83_RS07610 PF00107 Zinc-binding dehydrogenase AVR83_RS07665 PF00403 Heavy-metal-associated domain AVR83_RS07670 PF00107 Zinc-binding dehydrogenase AVR83_RS07670 PF08240 Alcohol dehydrogenase GroES-like domain AVR83_RS07675 PF00465 Iron-containing alcohol dehydrogenase AVR83_RS07685 PF13520 Amino acid permease AVR83_RS07705 PF01546 Peptidase family M20/M25/M40 AVR83_RS07705 PF07687 Peptidase dimerisation domain AVR83_RS07715 PF00005 ABC transporter AVR83_RS07715 PF00664 ABC transporter transmembrane region AVR83_RS07720 PF00005 ABC transporter AVR83_RS07720 PF00664 ABC transporter transmembrane region AVR83_RS07765 PF00106 short chain dehydrogenase AVR83_RS07775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVR83_RS07775 PF03466 LysR substrate binding domain AVR83_RS07780 PF00817 impB/mucB/samB family AVR83_RS07780 PF11799 impB/mucB/samB family C-terminal domain AVR83_RS07780 PF11798 IMS family HHH motif AVR83_RS07790 PF00990 Diguanylate cyclase, GGDEF domain AVR83_RS07805 PF01297 Zinc-uptake complex component A periplasmic AVR83_RS07820 PF01464 Transglycosylase SLT domain AVR83_RS07825 PF06737 Transglycosylase-like domain AVR83_RS07830 PF13411 MerR HTH family regulatory protein AVR83_RS07840 PF00232 Glycosyl hydrolase family 1 AVR83_RS07845 PF02378 Phosphotransferase system, EIIC AVR83_RS07850 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AVR83_RS07885 PF12704 MacB-like periplasmic core domain AVR83_RS07885 PF02687 FtsX-like permease family AVR83_RS07885 PF00005 ABC transporter AVR83_RS07895 PF01022 Bacterial regulatory protein, arsR family AVR83_RS07915 PF01566 Natural resistance-associated macrophage protein AVR83_RS07925 PF04138 GtrA-like protein AVR83_RS07930 PF00413 Matrixin AVR83_RS07940 PF13458 Periplasmic binding protein AVR83_RS07945 PF02653 Branched-chain amino acid transport system / permease component AVR83_RS07950 PF11862 Domain of unknown function (DUF3382) AVR83_RS07950 PF02653 Branched-chain amino acid transport system / permease component AVR83_RS07955 PF00005 ABC transporter AVR83_RS07955 PF12399 Branched-chain amino acid ATP-binding cassette transporter AVR83_RS07960 PF00005 ABC transporter AVR83_RS07965 PF12627 Probable RNA and SrmB- binding site of polymerase A AVR83_RS07965 PF00571 CBS domain AVR83_RS07965 PF01368 DHH family AVR83_RS07965 PF02272 DHHA1 domain AVR83_RS07965 PF01743 Poly A polymerase head domain AVR83_RS07995 PF02653 Branched-chain amino acid transport system / permease component AVR83_RS08000 PF00005 ABC transporter AVR83_RS08005 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AVR83_RS08005 PF00367 phosphotransferase system, EIIB AVR83_RS08005 PF02378 Phosphotransferase system, EIIC AVR83_RS08010 PF00881 Nitroreductase family AVR83_RS08020 PF00664 ABC transporter transmembrane region AVR83_RS08020 PF00005 ABC transporter AVR83_RS08025 PF00480 ROK family AVR83_RS08050 PF00892 EamA-like transporter family AVR83_RS08095 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AVR83_RS08100 PF00939 Sodium:sulfate symporter transmembrane region AVR83_RS08105 PF03466 LysR substrate binding domain AVR83_RS08105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVR83_RS08125 PF01207 Dihydrouridine synthase (Dus) AVR83_RS08130 PF02424 ApbE family AVR83_RS08135 PF01327 Polypeptide deformylase AVR83_RS08145 PF13597 Anaerobic ribonucleoside-triphosphate reductase AVR83_RS08145 PF03477 ATP cone domain AVR83_RS08155 PF00563 EAL domain AVR83_RS08155 PF12792 CSS motif domain associated with EAL AVR83_RS08160 PF00990 Diguanylate cyclase, GGDEF domain AVR83_RS08195 PF11700 Vacuole effluxer Atg22 like AVR83_RS08210 PF00005 ABC transporter AVR83_RS08210 PF17755 UvrA DNA-binding domain AVR83_RS08210 PF17760 UvrA interaction domain AVR83_RS08225 PF12848 ABC transporter AVR83_RS08225 PF00005 ABC transporter AVR83_RS08245 PF01223 DNA/RNA non-specific endonuclease AVR83_RS08250 PF01022 Bacterial regulatory protein, arsR family AVR83_RS08275 PF07690 Major Facilitator Superfamily AVR83_RS08280 PF00005 ABC transporter AVR83_RS08280 PF00664 ABC transporter transmembrane region AVR83_RS08285 PF00005 ABC transporter AVR83_RS08285 PF00664 ABC transporter transmembrane region AVR83_RS08290 PF00248 Aldo/keto reductase family AVR83_RS08300 PF00155 Aminotransferase class I and II AVR83_RS08315 PF13419 Haloacid dehalogenase-like hydrolase AVR83_RS08320 PF14602 Hexapeptide repeat of succinyl-transferase AVR83_RS08320 PF12464 Maltose acetyltransferase AVR83_RS08325 PF00582 Universal stress protein family AVR83_RS08335 PF07690 Major Facilitator Superfamily AVR83_RS08340 PF00248 Aldo/keto reductase family AVR83_RS08345 PF00248 Aldo/keto reductase family AVR83_RS08350 PF00106 short chain dehydrogenase AVR83_RS08370 PF03466 LysR substrate binding domain AVR83_RS08370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVR83_RS08375 PF00248 Aldo/keto reductase family AVR83_RS08400 PF06736 Protein of unknown function (DUF1211) AVR83_RS08405 PF00248 Aldo/keto reductase family AVR83_RS08415 PF08240 Alcohol dehydrogenase GroES-like domain AVR83_RS08415 PF00107 Zinc-binding dehydrogenase AVR83_RS08425 PF03466 LysR substrate binding domain AVR83_RS08425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVR83_RS08450 PF00583 Acetyltransferase (GNAT) family AVR83_RS08460 PF10502 Signal peptidase, peptidase S26 AVR83_RS08465 PF12464 Maltose acetyltransferase AVR83_RS08465 PF14602 Hexapeptide repeat of succinyl-transferase AVR83_RS08470 PF00633 Helix-hairpin-helix motif AVR83_RS08470 PF00730 HhH-GPD superfamily base excision DNA repair protein AVR83_RS08475 PF00005 ABC transporter AVR83_RS08485 PF01546 Peptidase family M20/M25/M40 AVR83_RS08485 PF07687 Peptidase dimerisation domain AVR83_RS08490 PF13411 MerR HTH family regulatory protein AVR83_RS08505 PF00106 short chain dehydrogenase AVR83_RS08515 PF00005 ABC transporter AVR83_RS08515 PF13732 Domain of unknown function (DUF4162) AVR83_RS08520 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AVR83_RS08520 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AVR83_RS08535 PF13439 Glycosyltransferase Family 4 AVR83_RS08540 PF00534 Glycosyl transferases group 1 AVR83_RS08540 PF13439 Glycosyltransferase Family 4 AVR83_RS08545 PF03466 LysR substrate binding domain AVR83_RS08545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVR83_RS08550 PF03601 Conserved hypothetical protein 698 AVR83_RS08555 PF13302 Acetyltransferase (GNAT) domain AVR83_RS08565 PF07690 Major Facilitator Superfamily AVR83_RS08575 PF07690 Major Facilitator Superfamily AVR83_RS08580 PF00206 Lyase AVR83_RS08580 PF10415 Fumarase C C-terminus AVR83_RS08595 PF00999 Sodium/hydrogen exchanger family AVR83_RS08605 PF01156 Inosine-uridine preferring nucleoside hydrolase AVR83_RS08615 PF00005 ABC transporter AVR83_RS08620 PF02687 FtsX-like permease family AVR83_RS08630 PF00375 Sodium:dicarboxylate symporter family AVR83_RS08635 PF06445 GyrI-like small molecule binding domain AVR83_RS08635 PF13411 MerR HTH family regulatory protein AVR83_RS08640 PF04474 Protein of unknown function (DUF554) AVR83_RS08650 PF13529 Peptidase_C39 like family AVR83_RS08665 PF01479 S4 domain AVR83_RS08665 PF00579 tRNA synthetases class I (W and Y) AVR83_RS08670 PF07155 ECF-type riboflavin transporter, S component AVR83_RS08700 PF00248 Aldo/keto reductase family AVR83_RS08705 PF00248 Aldo/keto reductase family AVR83_RS08715 PF13520 Amino acid permease AVR83_RS08720 PF01487 Type I 3-dehydroquinase AVR83_RS08740 PF00258 Flavodoxin AVR83_RS08755 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVR83_RS08760 PF00892 EamA-like transporter family AVR83_RS08765 PF02558 Ketopantoate reductase PanE/ApbA AVR83_RS08765 PF08546 Ketopantoate reductase PanE/ApbA C terminal AVR83_RS08780 PF00300 Histidine phosphatase superfamily (branch 1) AVR83_RS08785 PF00535 Glycosyl transferase family 2 AVR83_RS08790 PF07702 UTRA domain AVR83_RS08790 PF00392 Bacterial regulatory proteins, gntR family AVR83_RS08795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AVR83_RS08800 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AVR83_RS08805 PF00232 Glycosyl hydrolase family 1 AVR83_RS08810 PF00232 Glycosyl hydrolase family 1 AVR83_RS08815 PF00291 Pyridoxal-phosphate dependent enzyme AVR83_RS08820 PF00005 ABC transporter AVR83_RS08830 PF00440 Bacterial regulatory proteins, tetR family AVR83_RS08835 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AVR83_RS08835 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain AVR83_RS08835 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AVR83_RS08840 PF08279 HTH domain AVR83_RS08840 PF02829 3H domain AVR83_RS08875 PF00293 NUDIX domain AVR83_RS08880 PF00132 Bacterial transferase hexapeptide (six repeats) AVR83_RS08880 PF12464 Maltose acetyltransferase AVR83_RS08895 PF14821 Threonine synthase N terminus AVR83_RS08895 PF00291 Pyridoxal-phosphate dependent enzyme AVR83_RS08900 PF02903 Alpha amylase, N-terminal ig-like domain AVR83_RS08900 PF00128 Alpha amylase, catalytic domain AVR83_RS08920 PF00155 Aminotransferase class I and II AVR83_RS08940 PF04138 GtrA-like protein AVR83_RS08950 PF00582 Universal stress protein family AVR83_RS08960 PF00005 ABC transporter AVR83_RS08965 PF00392 Bacterial regulatory proteins, gntR family AVR83_RS08980 PF00005 ABC transporter AVR83_RS08985 PF00710 Asparaginase, N-terminal AVR83_RS08985 PF17763 Glutaminase/Asparaginase C-terminal domain AVR83_RS09000 PF13350 Tyrosine phosphatase family AVR83_RS09005 PF03099 Biotin/lipoate A/B protein ligase family AVR83_RS09005 PF10437 Bacterial lipoate protein ligase C-terminus AVR83_RS09010 PF03358 NADPH-dependent FMN reductase AVR83_RS09010 PF04205 FMN-binding domain AVR83_RS09010 PF00890 FAD binding domain AVR83_RS09015 PF04205 FMN-binding domain AVR83_RS09015 PF03358 NADPH-dependent FMN reductase AVR83_RS09015 PF00890 FAD binding domain AVR83_RS09020 PF00731 AIR carboxylase AVR83_RS09025 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AVR83_RS09025 PF02222 ATP-grasp domain AVR83_RS09030 PF01259 SAICAR synthetase AVR83_RS09035 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AVR83_RS09045 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AVR83_RS09045 PF02769 AIR synthase related protein, C-terminal domain AVR83_RS09045 PF00586 AIR synthase related protein, N-terminal domain AVR83_RS09050 PF00156 Phosphoribosyl transferase domain AVR83_RS09050 PF13537 Glutamine amidotransferase domain AVR83_RS09055 PF00586 AIR synthase related protein, N-terminal domain AVR83_RS09055 PF02769 AIR synthase related protein, C-terminal domain AVR83_RS09060 PF00551 Formyl transferase AVR83_RS09065 PF01808 AICARFT/IMPCHase bienzyme AVR83_RS09065 PF02142 MGS-like domain AVR83_RS09070 PF02843 Phosphoribosylglycinamide synthetase, C domain AVR83_RS09070 PF02844 Phosphoribosylglycinamide synthetase, N domain AVR83_RS09070 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AVR83_RS09080 PF00535 Glycosyl transferase family 2 AVR83_RS09100 PF00860 Permease family AVR83_RS09105 PF00860 Permease family AVR83_RS09110 PF13556 PucR C-terminal helix-turn-helix domain AVR83_RS09110 PF07905 Purine catabolism regulatory protein-like family AVR83_RS09110 PF17853 GGDEF-like domain AVR83_RS09115 PF00156 Phosphoribosyl transferase domain AVR83_RS09120 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AVR83_RS09120 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AVR83_RS09125 PF01979 Amidohydrolase family AVR83_RS09130 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AVR83_RS09130 PF00117 Glutamine amidotransferase class-I AVR83_RS09135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVR83_RS09135 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AVR83_RS09135 PF02142 MGS-like domain AVR83_RS09140 PF01180 Dihydroorotate dehydrogenase AVR83_RS09145 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AVR83_RS09150 PF00156 Phosphoribosyl transferase domain AVR83_RS09160 PF12705 PD-(D/E)XK nuclease superfamily AVR83_RS09165 PF12705 PD-(D/E)XK nuclease superfamily AVR83_RS09165 PF13361 UvrD-like helicase C-terminal domain AVR83_RS09165 PF00580 UvrD/REP helicase N-terminal domain AVR83_RS09175 PF13460 NAD(P)H-binding AVR83_RS09180 PF03466 LysR substrate binding domain AVR83_RS09180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVR83_RS09195 PF00155 Aminotransferase class I and II AVR83_RS09200 PF00392 Bacterial regulatory proteins, gntR family AVR83_RS09200 PF00155 Aminotransferase class I and II AVR83_RS09205 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AVR83_RS09205 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AVR83_RS09215 PF00107 Zinc-binding dehydrogenase AVR83_RS09215 PF08240 Alcohol dehydrogenase GroES-like domain AVR83_RS09220 PF13411 MerR HTH family regulatory protein AVR83_RS09220 PF07739 TipAS antibiotic-recognition domain AVR83_RS09225 PF07690 Major Facilitator Superfamily AVR83_RS09230 PF00999 Sodium/hydrogen exchanger family AVR83_RS09235 PF07972 NrdI Flavodoxin like AVR83_RS09240 PF00571 CBS domain AVR83_RS09240 PF03471 Transporter associated domain AVR83_RS09240 PF01595 Cyclin M transmembrane N-terminal domain AVR83_RS09270 PF01966 HD domain AVR83_RS09280 PF04073 Aminoacyl-tRNA editing domain AVR83_RS09285 PF07702 UTRA domain AVR83_RS09285 PF00392 Bacterial regulatory proteins, gntR family AVR83_RS09290 PF00756 Putative esterase AVR83_RS09295 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase AVR83_RS09295 PF09363 XFP C-terminal domain AVR83_RS09295 PF09364 XFP N-terminal domain AVR83_RS09300 PF00534 Glycosyl transferases group 1 AVR83_RS09310 PF08671 Anti-repressor SinI AVR83_RS09310 PF01381 Helix-turn-helix AVR83_RS09315 PF01479 S4 domain AVR83_RS09315 PF00849 RNA pseudouridylate synthase AVR83_RS09320 PF00582 Universal stress protein family AVR83_RS09325 PF00392 Bacterial regulatory proteins, gntR family AVR83_RS09325 PF07702 UTRA domain AVR83_RS09330 PF03830 PTS system sorbose subfamily IIB component AVR83_RS09335 PF03609 PTS system sorbose-specific iic component AVR83_RS09340 PF03613 PTS system mannose/fructose/sorbose family IID component AVR83_RS09350 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AVR83_RS09350 PF13457 GW (Gly-Tryp) dipeptide domain AVR83_RS09355 PF03099 Biotin/lipoate A/B protein ligase family AVR83_RS09355 PF10437 Bacterial lipoate protein ligase C-terminus AVR83_RS09385 PF01053 Cys/Met metabolism PLP-dependent enzyme AVR83_RS09390 PF00085 Thioredoxin AVR83_RS09395 PF00326 Prolyl oligopeptidase family AVR83_RS09405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AVR83_RS09405 PF00205 Thiamine pyrophosphate enzyme, central domain AVR83_RS09405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AVR83_RS09445 PF00392 Bacterial regulatory proteins, gntR family AVR83_RS09450 PF00005 ABC transporter AVR83_RS09460 PF00857 Isochorismatase family AVR83_RS09465 PF02779 Transketolase, pyrimidine binding domain AVR83_RS09465 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AVR83_RS09465 PF02780 Transketolase, C-terminal domain AVR83_RS09470 PF00999 Sodium/hydrogen exchanger family AVR83_RS09475 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVR83_RS09475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVR83_RS09480 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AVR83_RS09480 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AVR83_RS09485 PF01380 SIS domain AVR83_RS09485 PF01418 Helix-turn-helix domain, rpiR family AVR83_RS09490 PF00356 Bacterial regulatory proteins, lacI family AVR83_RS09490 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AVR83_RS09495 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVR83_RS09500 PF00923 Transaldolase/Fructose-6-phosphate aldolase AVR83_RS09505 PF04198 Putative sugar-binding domain AVR83_RS09505 PF13936 Helix-turn-helix domain AVR83_RS09510 PF02901 Pyruvate formate lyase-like AVR83_RS09510 PF01228 Glycine radical AVR83_RS09515 PF00455 DeoR C terminal sensor domain AVR83_RS09515 PF08220 DeoR-like helix-turn-helix domain AVR83_RS09520 PF04055 Radical SAM superfamily AVR83_RS09530 PF06800 Sugar transport protein AVR83_RS09535 PF00075 RNase H AVR83_RS09540 PF01156 Inosine-uridine preferring nucleoside hydrolase AVR83_RS09545 PF00881 Nitroreductase family AVR83_RS09550 PF03976 Polyphosphate kinase 2 (PPK2) AVR83_RS09555 PF17961 Bacterial Ig domain AVR83_RS09555 PF05737 Collagen binding domain AVR83_RS09555 PF00746 LPXTG cell wall anchor motif AVR83_RS09565 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVR83_RS09570 PF03009 Glycerophosphoryl diester phosphodiesterase family AVR83_RS09575 PF00884 Sulfatase AVR83_RS09595 PF06736 Protein of unknown function (DUF1211) AVR83_RS09610 PF02774 Semialdehyde dehydrogenase, dimerisation domain AVR83_RS09610 PF01118 Semialdehyde dehydrogenase, NAD binding domain AVR83_RS09635 PF02811 PHP domain AVR83_RS09640 PF13393 Histidyl-tRNA synthetase AVR83_RS09645 PF01634 ATP phosphoribosyltransferase AVR83_RS09650 PF00815 Histidinol dehydrogenase AVR83_RS09655 PF00475 Imidazoleglycerol-phosphate dehydratase AVR83_RS09660 PF00117 Glutamine amidotransferase class-I AVR83_RS09665 PF00977 Histidine biosynthesis protein AVR83_RS09670 PF00977 Histidine biosynthesis protein AVR83_RS09675 PF01502 Phosphoribosyl-AMP cyclohydrolase AVR83_RS09680 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AVR83_RS09685 PF00155 Aminotransferase class I and II AVR83_RS09690 PF14602 Hexapeptide repeat of succinyl-transferase AVR83_RS09690 PF12464 Maltose acetyltransferase AVR83_RS09695 PF03741 Integral membrane protein TerC family AVR83_RS09700 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AVR83_RS09700 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVR83_RS09705 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVR83_RS09705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVR83_RS09710 PF00005 ABC transporter AVR83_RS09715 PF02653 Branched-chain amino acid transport system / permease component AVR83_RS09725 PF04204 Homoserine O-succinyltransferase AVR83_RS09730 PF01053 Cys/Met metabolism PLP-dependent enzyme AVR83_RS09735 PF00742 Homoserine dehydrogenase AVR83_RS09735 PF03447 Homoserine dehydrogenase, NAD binding domain AVR83_RS09740 PF02645 Uncharacterised protein, DegV family COG1307 AVR83_RS09745 PF08546 Ketopantoate reductase PanE/ApbA C terminal AVR83_RS09745 PF02558 Ketopantoate reductase PanE/ApbA AVR83_RS09750 PF02378 Phosphotransferase system, EIIC AVR83_RS09750 PF00367 phosphotransferase system, EIIB AVR83_RS09750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AVR83_RS09765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AVR83_RS09775 PF00005 ABC transporter AVR83_RS09775 PF12848 ABC transporter AVR83_RS09780 PF00990 Diguanylate cyclase, GGDEF domain AVR83_RS09795 PF01037 Lrp/AsnC ligand binding domain AVR83_RS09800 PF00877 NlpC/P60 family AVR83_RS09815 PF07690 Major Facilitator Superfamily AVR83_RS09835 PF00892 EamA-like transporter family AVR83_RS09845 PF05167 Uncharacterised ACR (DUF711) AVR83_RS09850 PF00486 Transcriptional regulatory protein, C terminal AVR83_RS09850 PF00072 Response regulator receiver domain AVR83_RS09855 PF00512 His Kinase A (phospho-acceptor) domain AVR83_RS09855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVR83_RS09855 PF00672 HAMP domain AVR83_RS09860 PF10672 S-adenosylmethionine-dependent methyltransferase AVR83_RS09860 PF17785 PUA-like domain AVR83_RS09865 PF06800 Sugar transport protein AVR83_RS09870 PF00342 Phosphoglucose isomerase AVR83_RS09875 PF14659 Phage integrase, N-terminal SAM-like domain AVR83_RS09875 PF00589 Phage integrase family AVR83_RS09905 PF01381 Helix-turn-helix AVR83_RS10030 PF04466 Phage terminase large subunit AVR83_RS10030 PF17288 Terminase RNAseH like domain AVR83_RS10135 PF01476 LysM domain AVR83_RS10160 PF00005 ABC transporter AVR83_RS10160 PF02687 FtsX-like permease family AVR83_RS10160 PF12704 MacB-like periplasmic core domain AVR83_RS10170 PF00005 ABC transporter AVR83_RS10170 PF00664 ABC transporter transmembrane region AVR83_RS10175 PF06458 MucBP domain AVR83_RS10215 PF00589 Phage integrase family AVR83_RS10215 PF02899 Phage integrase, N-terminal SAM-like domain AVR83_RS10240 PF03992 Antibiotic biosynthesis monooxygenase AVR83_RS10250 PF01741 Large-conductance mechanosensitive channel, MscL AVR83_RS10375 PF02899 Phage integrase, N-terminal SAM-like domain AVR83_RS10375 PF00589 Phage integrase family AVR83_RS10655 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AVR83_RS10670 PF10668 Phage terminase small subunit AVR83_RS10670 PF03592 Terminase small subunit AVR83_RS10685 PF04327 Cysteine protease Prp AVR83_RS10815 PF01522 Polysaccharide deacetylase AVR83_RS10825 PF00005 ABC transporter AVR83_RS10825 PF00664 ABC transporter transmembrane region AVR83_RS10830 PF00664 ABC transporter transmembrane region AVR83_RS10830 PF00005 ABC transporter AVR83_RS10850 PF01063 Amino-transferase class IV AVR83_RS10860 PF00144 Beta-lactamase AVR83_RS10865 PF01238 Phosphomannose isomerase type I AVR83_RS10870 PF07685 CobB/CobQ-like glutamine amidotransferase domain AVR83_RS10875 PF08245 Mur ligase middle domain AVR83_RS10875 PF08353 Domain of unknown function (DUF1727) AVR83_RS10880 PF00265 Thymidine kinase AVR83_RS10885 PF03462 PCRF domain AVR83_RS10885 PF00472 RF-1 domain AVR83_RS10890 PF17827 PrmC N-terminal domain AVR83_RS10890 PF05175 Methyltransferase small domain AVR83_RS10895 PF03481 Putative GTP-binding controlling metal-binding AVR83_RS10895 PF01300 Telomere recombination AVR83_RS10900 PF00464 Serine hydroxymethyltransferase AVR83_RS10915 PF00860 Permease family AVR83_RS10920 PF00119 ATP synthase A chain AVR83_RS10925 PF00137 ATP synthase subunit C AVR83_RS10930 PF00430 ATP synthase B/B' CF(0) AVR83_RS10935 PF00213 ATP synthase delta (OSCP) subunit AVR83_RS10940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVR83_RS10940 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVR83_RS10940 PF00306 ATP synthase alpha/beta chain, C terminal domain AVR83_RS10945 PF00231 ATP synthase AVR83_RS10950 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AVR83_RS10950 PF02874 ATP synthase alpha/beta family, beta-barrel domain AVR83_RS10955 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AVR83_RS10955 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AVR83_RS10960 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVR83_RS10975 PF01809 Putative membrane protein insertion efficiency factor AVR83_RS10985 PF01098 Cell cycle protein AVR83_RS10990 PF01597 Glycine cleavage H-protein AVR83_RS10995 PF00005 ABC transporter AVR83_RS10995 PF09383 NIL domain AVR83_RS11000 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS11005 PF03180 NLPA lipoprotein AVR83_RS11010 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVR83_RS11010 PF00056 lactate/malate dehydrogenase, NAD binding domain AVR83_RS11020 PF08240 Alcohol dehydrogenase GroES-like domain AVR83_RS11020 PF00107 Zinc-binding dehydrogenase AVR83_RS11025 PF07478 D-ala D-ala ligase C-terminus AVR83_RS11025 PF01820 D-ala D-ala ligase N-terminus AVR83_RS11045 PF00582 Universal stress protein family AVR83_RS11060 PF12002 MgsA AAA+ ATPase C terminal AVR83_RS11060 PF16193 AAA C-terminal domain AVR83_RS11060 PF05496 Holliday junction DNA helicase RuvB P-loop domain AVR83_RS11065 PF18419 ATP-grasp-like domain AVR83_RS11065 PF04262 Glutamate-cysteine ligase AVR83_RS11070 PF00356 Bacterial regulatory proteins, lacI family AVR83_RS11075 PF03830 PTS system sorbose subfamily IIB component AVR83_RS11080 PF03609 PTS system sorbose-specific iic component AVR83_RS11085 PF03613 PTS system mannose/fructose/sorbose family IID component AVR83_RS11095 PF00128 Alpha amylase, catalytic domain AVR83_RS11100 PF01022 Bacterial regulatory protein, arsR family AVR83_RS11115 PF06335 Protein of unknown function (DUF1054) AVR83_RS11120 PF00163 Ribosomal protein S4/S9 N-terminal domain AVR83_RS11120 PF01479 S4 domain AVR83_RS11125 PF13185 GAF domain AVR83_RS11130 PF06160 Septation ring formation regulator, EzrA AVR83_RS11140 PF00266 Aminotransferase class-V AVR83_RS11145 PF02568 Thiamine biosynthesis protein (ThiI) AVR83_RS11145 PF02926 THUMP domain AVR83_RS11155 PF02655 ATP-grasp domain AVR83_RS11155 PF18419 ATP-grasp-like domain AVR83_RS11155 PF04262 Glutamate-cysteine ligase AVR83_RS11160 PF08534 Redoxin AVR83_RS11165 PF10458 Valyl tRNA synthetase tRNA binding arm AVR83_RS11165 PF08264 Anticodon-binding domain of tRNA AVR83_RS11165 PF00133 tRNA synthetases class I (I, L, M and V) AVR83_RS11170 PF08245 Mur ligase middle domain AVR83_RS11170 PF02875 Mur ligase family, glutamate ligase domain AVR83_RS11175 PF04002 RadC-like JAB domain AVR83_RS11185 PF04085 rod shape-determining protein MreC AVR83_RS11195 PF03775 Septum formation inhibitor MinC, C-terminal domain AVR83_RS11200 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AVR83_RS11205 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS11210 PF00005 ABC transporter AVR83_RS11215 PF00497 Bacterial extracellular solute-binding proteins, family 3 AVR83_RS11220 PF00696 Amino acid kinase family AVR83_RS11220 PF13840 ACT domain AVR83_RS11225 PF05193 Peptidase M16 inactive domain AVR83_RS11230 PF00675 Insulinase (Peptidase family M16) AVR83_RS11230 PF05193 Peptidase M16 inactive domain AVR83_RS11235 PF13464 Domain of unknown function (DUF4115) AVR83_RS11240 PF01066 CDP-alcohol phosphatidyltransferase AVR83_RS11245 PF02464 Competence-damaged protein AVR83_RS11245 PF18146 Damage-inducible protein CinA KH domain AVR83_RS11245 PF00994 Probable molybdopterin binding domain AVR83_RS11250 PF00154 recA bacterial DNA recombination protein AVR83_RS11255 PF01966 HD domain AVR83_RS11255 PF12072 Domain of unknown function (DUF3552) AVR83_RS11255 PF00013 KH domain AVR83_RS11260 PF13277 YmdB-like protein AVR83_RS11265 PF01624 MutS domain I AVR83_RS11265 PF05190 MutS family domain IV AVR83_RS11265 PF00488 MutS domain V AVR83_RS11265 PF05188 MutS domain II AVR83_RS11265 PF05192 MutS domain III AVR83_RS11270 PF08676 MutL C terminal dimerisation domain AVR83_RS11270 PF01119 DNA mismatch repair protein, C-terminal domain AVR83_RS11295 PF07499 RuvA, C-terminal domain AVR83_RS11295 PF01330 RuvA N terminal domain AVR83_RS11300 PF05491 RuvB C-terminal winged helix domain AVR83_RS11300 PF05496 Holliday junction DNA helicase RuvB P-loop domain AVR83_RS11300 PF17864 RuvB AAA lid domain AVR83_RS11305 PF02547 Queuosine biosynthesis protein AVR83_RS11310 PF01702 Queuine tRNA-ribosyltransferase AVR83_RS11315 PF02699 Preprotein translocase subunit AVR83_RS11320 PF11799 impB/mucB/samB family C-terminal domain AVR83_RS11320 PF00817 impB/mucB/samB family AVR83_RS11325 PF02272 DHHA1 domain AVR83_RS11325 PF01368 DHH family AVR83_RS11330 PF00271 Helicase conserved C-terminal domain AVR83_RS11330 PF00270 DEAD/DEAH box helicase AVR83_RS11335 PF01411 tRNA synthetases class II (A) AVR83_RS11335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVR83_RS11335 PF02272 DHHA1 domain AVR83_RS11340 PF06135 IreB regulatory phosphoprotein AVR83_RS11345 PF03652 Holliday junction resolvase AVR83_RS11350 PF06949 Protein of unknown function (DUF1292) AVR83_RS11360 PF00488 MutS domain V AVR83_RS11360 PF01713 Smr domain AVR83_RS11365 PF00085 Thioredoxin AVR83_RS11370 PF10702 Protein of unknown function (DUF2507) AVR83_RS11375 PF01177 Asp/Glu/Hydantoin racemase AVR83_RS11380 PF01725 Ham1 family AVR83_RS11395 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AVR83_RS11395 PF14602 Hexapeptide repeat of succinyl-transferase AVR83_RS11395 PF00132 Bacterial transferase hexapeptide (six repeats) AVR83_RS11400 PF07687 Peptidase dimerisation domain AVR83_RS11400 PF01546 Peptidase family M20/M25/M40 AVR83_RS11405 PF00924 Mechanosensitive ion channel AVR83_RS11420 PF13411 MerR HTH family regulatory protein AVR83_RS11425 PF00557 Metallopeptidase family M24 AVR83_RS11425 PF01321 Creatinase/Prolidase N-terminal domain AVR83_RS11430 PF00356 Bacterial regulatory proteins, lacI family AVR83_RS11445 PF01709 Transcriptional regulator AVR83_RS11450 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AVR83_RS11450 PF00294 pfkB family carbohydrate kinase AVR83_RS11455 PF00437 Type II/IV secretion system protein AVR83_RS11485 PF02384 N-6 DNA Methylase AVR83_RS11490 PF00871 Acetokinase family AVR83_RS11495 PF00324 Amino acid permease AVR83_RS11505 PF02872 5'-nucleotidase, C-terminal domain AVR83_RS11510 PF06265 Protein of unknown function (DUF1027) AVR83_RS11515 PF13344 Haloacid dehalogenase-like hydrolase AVR83_RS11525 PF09335 SNARE associated Golgi protein AVR83_RS11530 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AVR83_RS11535 PF00575 S1 RNA binding domain AVR83_RS11680 PF12706 Beta-lactamase superfamily domain AVR83_RS11685 PF03960 ArsC family AVR83_RS11690 PF05389 Negative regulator of genetic competence (MecA) AVR83_RS11700 PF01432 Peptidase family M3 AVR83_RS11700 PF08439 Oligopeptidase F AVR83_RS11710 PF04607 Region found in RelA / SpoT proteins AVR83_RS11715 PF01513 ATP-NAD kinase AVR83_RS11720 PF00849 RNA pseudouridylate synthase AVR83_RS11725 PF03932 CutC family AVR83_RS11730 PF10282 Lactonase, 7-bladed beta-propeller AVR83_RS11740 PF01594 AI-2E family transporter AVR83_RS11745 PF00253 Ribosomal protein S14p/S29e AVR83_RS11755 PF05525 Branched-chain amino acid transport protein AVR83_RS11765 PF00588 SpoU rRNA Methylase family AVR83_RS11770 PF01580 FtsK/SpoIIIE family AVR83_RS11770 PF09397 Ftsk gamma domain AVR83_RS11770 PF17854 FtsK alpha domain AVR83_RS11785 PF02381 MraZ protein, putative antitoxin-like AVR83_RS11790 PF01795 MraW methylase family AVR83_RS11800 PF03793 PASTA domain AVR83_RS11800 PF00905 Penicillin binding protein transpeptidase domain AVR83_RS11800 PF03717 Penicillin-binding Protein dimerisation domain AVR83_RS11805 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AVR83_RS11805 PF00953 Glycosyl transferase family 4 AVR83_RS11810 PF02875 Mur ligase family, glutamate ligase domain AVR83_RS11810 PF08245 Mur ligase middle domain AVR83_RS11815 PF04101 Glycosyltransferase family 28 C-terminal domain AVR83_RS11815 PF03033 Glycosyltransferase family 28 N-terminal domain AVR83_RS11820 PF08478 POTRA domain, FtsQ-type AVR83_RS11820 PF03799 Cell division protein FtsQ AVR83_RS11825 PF11983 Membrane-attachment and polymerisation-promoting switch AVR83_RS11825 PF02491 SHS2 domain inserted in FTSA AVR83_RS11830 PF12327 FtsZ family, C-terminal domain AVR83_RS11830 PF00091 Tubulin/FtsZ family, GTPase domain AVR83_RS11835 PF04472 Cell division protein SepF AVR83_RS11840 PF02325 YGGT family AVR83_RS11850 PF05103 DivIVA protein AVR83_RS11855 PF06827 Zinc finger found in FPG and IleRS AVR83_RS11855 PF00133 tRNA synthetases class I (I, L, M and V) AVR83_RS11855 PF08264 Anticodon-binding domain of tRNA AVR83_RS11860 PF00005 ABC transporter AVR83_RS11870 PF00072 Response regulator receiver domain AVR83_RS11870 PF04397 LytTr DNA-binding domain AVR83_RS11880 PF01678 Diaminopimelate epimerase AVR83_RS11885 PF00293 NUDIX domain AVR83_RS11895 PF01048 Phosphorylase superfamily AVR83_RS11900 PF00266 Aminotransferase class-V AVR83_RS11915 PF02386 Cation transport protein AVR83_RS11920 PF02254 TrkA-N domain AVR83_RS11920 PF02080 TrkA-C domain AVR83_RS11940 PF00300 Histidine phosphatase superfamily (branch 1) AVR83_RS11950 PF14490 Helix-hairpin-helix containing domain AVR83_RS11950 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AVR83_RS11950 PF13538 UvrD-like helicase C-terminal domain AVR83_RS11955 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AVR83_RS11955 PF14572 Phosphoribosyl synthetase-associated domain AVR83_RS11960 PF06725 3D domain AVR83_RS11960 PF01476 LysM domain AVR83_RS11970 PF00781 Diacylglycerol kinase catalytic domain AVR83_RS11975 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AVR83_RS11975 PF00753 Metallo-beta-lactamase superfamily AVR83_RS11975 PF17770 Ribonuclease J C-terminal domain AVR83_RS11980 PF07288 Protein of unknown function (DUF1447) AVR83_RS11990 PF01327 Polypeptide deformylase AVR83_RS11995 PF00676 Dehydrogenase E1 component AVR83_RS12000 PF02780 Transketolase, C-terminal domain AVR83_RS12000 PF02779 Transketolase, pyrimidine binding domain AVR83_RS12005 PF00364 Biotin-requiring enzyme AVR83_RS12005 PF02817 e3 binding domain AVR83_RS12005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AVR83_RS12010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVR83_RS12010 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVR83_RS12015 PF00056 lactate/malate dehydrogenase, NAD binding domain AVR83_RS12015 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVR83_RS12020 PF05256 Uncharacterised protein family (UPF0223) AVR83_RS12025 PF00459 Inositol monophosphatase family AVR83_RS12030 PF00009 Elongation factor Tu GTP binding domain AVR83_RS12030 PF14492 Elongation Factor G, domain II AVR83_RS12030 PF03144 Elongation factor Tu domain 2 AVR83_RS12030 PF00679 Elongation factor G C-terminus AVR83_RS12045 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 AVR83_RS12045 PF00535 Glycosyl transferase family 2 AVR83_RS12055 PF01098 Cell cycle protein AVR83_RS12060 PF00364 Biotin-requiring enzyme AVR83_RS12060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVR83_RS12060 PF02436 Conserved carboxylase domain AVR83_RS12060 PF00682 HMGL-like AVR83_RS12060 PF02785 Biotin carboxylase C-terminal domain AVR83_RS12060 PF00289 Biotin carboxylase, N-terminal domain AVR83_RS12065 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) AVR83_RS12075 PF01467 Cytidylyltransferase-like AVR83_RS12080 PF05362 Lon protease (S16) C-terminal proteolytic domain AVR83_RS12080 PF13180 PDZ domain AVR83_RS12085 PF10531 SLBB domain AVR83_RS12090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVR83_RS12095 PF13567 Domain of unknown function (DUF4131) AVR83_RS12095 PF00753 Metallo-beta-lactamase superfamily AVR83_RS12095 PF03772 Competence protein AVR83_RS12100 PF06144 DNA polymerase III, delta subunit AVR83_RS12105 PF01649 Ribosomal protein S20 AVR83_RS12110 PF00312 Ribosomal protein S15 AVR83_RS12115 PF07690 Major Facilitator Superfamily AVR83_RS12120 PF00701 Dihydrodipicolinate synthetase family AVR83_RS12125 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AVR83_RS12125 PF00753 Metallo-beta-lactamase superfamily AVR83_RS12125 PF17770 Ribonuclease J C-terminal domain AVR83_RS12135 PF03143 Elongation factor Tu C-terminal domain AVR83_RS12135 PF03144 Elongation factor Tu domain 2 AVR83_RS12135 PF00009 Elongation factor Tu GTP binding domain AVR83_RS12140 PF05697 Bacterial trigger factor protein (TF) AVR83_RS12140 PF05698 Bacterial trigger factor protein (TF) C-terminus AVR83_RS12140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AVR83_RS12145 PF10431 C-terminal, D2-small domain, of ClpB protein AVR83_RS12145 PF07724 AAA domain (Cdc48 subfamily) AVR83_RS12145 PF06689 ClpX C4-type zinc finger AVR83_RS12150 PF01926 50S ribosome-binding GTPase AVR83_RS12165 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS12170 PF00005 ABC transporter AVR83_RS12175 PF01541 GIY-YIG catalytic domain AVR83_RS12175 PF08459 UvrC Helix-hairpin-helix N-terminal AVR83_RS12175 PF02151 UvrB/uvrC motif AVR83_RS12185 PF13614 AAA domain AVR83_RS12195 PF01370 NAD dependent epimerase/dehydratase family AVR83_RS12200 PF02397 Bacterial sugar transferase AVR83_RS12205 PF00534 Glycosyl transferases group 1 AVR83_RS12220 PF00535 Glycosyl transferase family 2 AVR83_RS12235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AVR83_RS12235 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AVR83_RS12240 PF00294 pfkB family carbohydrate kinase AVR83_RS12245 PF00455 DeoR C terminal sensor domain AVR83_RS12245 PF08220 DeoR-like helix-turn-helix domain AVR83_RS12250 PF01926 50S ribosome-binding GTPase AVR83_RS12250 PF01018 GTP1/OBG AVR83_RS12250 PF09269 Domain of unknown function (DUF1967) AVR83_RS12260 PF12706 Beta-lactamase superfamily domain AVR83_RS12260 PF00753 Metallo-beta-lactamase superfamily AVR83_RS12265 PF00106 short chain dehydrogenase AVR83_RS12270 PF06305 Lipopolysaccharide assembly protein A domain AVR83_RS12275 PF01368 DHH family AVR83_RS12275 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AVR83_RS12275 PF02272 DHHA1 domain AVR83_RS12275 PF17768 RecJ OB domain AVR83_RS12280 PF00156 Phosphoribosyl transferase domain AVR83_RS12295 PF01906 Putative heavy-metal-binding AVR83_RS12325 PF01098 Cell cycle protein AVR83_RS12335 PF00005 ABC transporter AVR83_RS12350 PF00535 Glycosyl transferase family 2 AVR83_RS12365 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal AVR83_RS12365 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal AVR83_RS12375 PF00717 Peptidase S24-like AVR83_RS12375 PF01726 LexA DNA binding domain AVR83_RS12380 PF05979 Bacterial protein of unknown function (DUF896) AVR83_RS12385 PF03672 Uncharacterised protein family (UPF0154) AVR83_RS12390 PF01553 Acyltransferase AVR83_RS12395 PF05175 Methyltransferase small domain AVR83_RS12400 PF01541 GIY-YIG catalytic domain AVR83_RS12405 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVR83_RS12405 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVR83_RS12415 PF00318 Ribosomal protein S2 AVR83_RS12420 PF00889 Elongation factor TS AVR83_RS12425 PF00696 Amino acid kinase family AVR83_RS12430 PF01765 Ribosome recycling factor AVR83_RS12435 PF01255 Putative undecaprenyl diphosphate synthase AVR83_RS12445 PF17820 PDZ domain AVR83_RS12445 PF02163 Peptidase family M50 AVR83_RS12450 PF03129 Anticodon binding domain AVR83_RS12450 PF04073 Aminoacyl-tRNA editing domain AVR83_RS12450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVR83_RS12455 PF14579 Helix-hairpin-helix motif AVR83_RS12455 PF14480 DNA polymerase III polC-type N-terminus I AVR83_RS12455 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVR83_RS12455 PF00929 Exonuclease AVR83_RS12455 PF02811 PHP domain AVR83_RS12455 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVR83_RS12455 PF11490 DNA polymerase III polC-type N-terminus II AVR83_RS12460 PF17384 RimP C-terminal SH3 domain AVR83_RS12460 PF02576 RimP N-terminal domain AVR83_RS12465 PF13184 NusA-like KH domain AVR83_RS12465 PF08529 NusA N-terminal domain AVR83_RS12465 PF00575 S1 RNA binding domain AVR83_RS12470 PF04296 Protein of unknown function (DUF448) AVR83_RS12475 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AVR83_RS12480 PF00009 Elongation factor Tu GTP binding domain AVR83_RS12480 PF11987 Translation-initiation factor 2 AVR83_RS12480 PF04760 Translation initiation factor IF-2, N-terminal region AVR83_RS12485 PF02033 Ribosome-binding factor A AVR83_RS12490 PF07690 Major Facilitator Superfamily AVR83_RS12495 PF01264 Chorismate synthase AVR83_RS12505 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AVR83_RS12510 PF01842 ACT domain AVR83_RS12510 PF02153 Prephenate dehydrogenase AVR83_RS12515 PF01202 Shikimate kinase AVR83_RS12520 PF16198 tRNA pseudouridylate synthase B C-terminal domain AVR83_RS12520 PF01509 TruB family pseudouridylate synthase (N terminal domain) AVR83_RS12525 PF06574 FAD synthetase AVR83_RS12525 PF01687 Riboflavin kinase AVR83_RS12530 PF03306 Alpha-acetolactate decarboxylase AVR83_RS12535 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AVR83_RS12535 PF01628 HrcA protein C terminal domain AVR83_RS12540 PF01025 GrpE AVR83_RS12545 PF00012 Hsp70 protein AVR83_RS12550 PF01556 DnaJ C terminal domain AVR83_RS12550 PF00226 DnaJ domain AVR83_RS12550 PF00684 DnaJ central domain AVR83_RS12555 PF11954 Domain of unknown function (DUF3471) AVR83_RS12555 PF00144 Beta-lactamase AVR83_RS12565 PF13193 AMP-binding enzyme C-terminal domain AVR83_RS12565 PF00501 AMP-binding enzyme AVR83_RS12570 PF03062 MBOAT, membrane-bound O-acyltransferase family AVR83_RS12575 PF00550 Phosphopantetheine attachment site AVR83_RS12580 PF04914 DltD protein AVR83_RS12585 PF00679 Elongation factor G C-terminus AVR83_RS12585 PF00009 Elongation factor Tu GTP binding domain AVR83_RS12585 PF03144 Elongation factor Tu domain 2 AVR83_RS12585 PF06421 GTP-binding protein LepA C-terminus AVR83_RS12600 PF02245 Methylpurine-DNA glycosylase (MPG) AVR83_RS12610 PF04452 RNA methyltransferase AVR83_RS12620 PF04607 Region found in RelA / SpoT proteins AVR83_RS12620 PF13291 ACT domain AVR83_RS12620 PF02824 TGS domain AVR83_RS12625 PF02580 D-Tyr-tRNA(Tyr) deacylase AVR83_RS12630 PF13419 Haloacid dehalogenase-like hydrolase AVR83_RS12635 PF03881 Fructosamine kinase AVR83_RS12640 PF01520 N-acetylmuramoyl-L-alanine amidase AVR83_RS12640 PF08239 Bacterial SH3 domain AVR83_RS12645 PF13393 Histidyl-tRNA synthetase AVR83_RS12645 PF03129 Anticodon binding domain AVR83_RS12650 PF01336 OB-fold nucleic acid binding domain AVR83_RS12650 PF02938 GAD domain AVR83_RS12650 PF00152 tRNA synthetases class II (D, K and N) AVR83_RS12655 PF01625 Peptide methionine sulfoxide reductase AVR83_RS12660 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AVR83_RS12660 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AVR83_RS12665 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AVR83_RS12670 PF01261 Xylose isomerase-like TIM barrel AVR83_RS12680 PF03618 Kinase/pyrophosphorylase AVR83_RS12685 PF01165 Ribosomal protein S21 AVR83_RS12690 PF09424 Yqey-like protein AVR83_RS12695 PF02562 PhoH-like protein AVR83_RS12700 PF02130 Uncharacterized protein family UPF0054 AVR83_RS12705 PF01219 Prokaryotic diacylglycerol kinase AVR83_RS12710 PF01926 50S ribosome-binding GTPase AVR83_RS12710 PF07650 KH domain AVR83_RS12715 PF02565 Recombination protein O C terminal AVR83_RS12715 PF11967 Recombination protein O N terminal AVR83_RS12720 PF02091 Glycyl-tRNA synthetase alpha subunit AVR83_RS12725 PF02092 Glycyl-tRNA synthetase beta subunit AVR83_RS12730 PF10410 DnaB-helicase binding domain of primase AVR83_RS12730 PF08275 DNA primase catalytic core, N-terminal domain AVR83_RS12730 PF01807 CHC2 zinc finger AVR83_RS12735 PF04545 Sigma-70, region 4 AVR83_RS12735 PF04539 Sigma-70 region 3 AVR83_RS12735 PF04542 Sigma-70 region 2 AVR83_RS12735 PF00140 Sigma-70 factor, region 1.2 AVR83_RS12735 PF03979 Sigma-70 factor, region 1.1 AVR83_RS12740 PF00392 Bacterial regulatory proteins, gntR family AVR83_RS12745 PF00005 ABC transporter AVR83_RS12765 PF00005 ABC transporter AVR83_RS12780 PF00117 Glutamine amidotransferase class-I AVR83_RS12780 PF13673 Acetyltransferase (GNAT) domain AVR83_RS12780 PF03352 Methyladenine glycosylase AVR83_RS12780 PF13302 Acetyltransferase (GNAT) domain AVR83_RS12780 PF00958 GMP synthase C terminal domain AVR83_RS12785 PF00005 ABC transporter AVR83_RS12795 PF07730 Histidine kinase AVR83_RS12800 PF00072 Response regulator receiver domain AVR83_RS12800 PF00196 Bacterial regulatory proteins, luxR family AVR83_RS12805 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVR83_RS12805 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVR83_RS12815 PF00107 Zinc-binding dehydrogenase AVR83_RS12815 PF08240 Alcohol dehydrogenase GroES-like domain AVR83_RS12820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVR83_RS12820 PF03466 LysR substrate binding domain AVR83_RS12840 PF01418 Helix-turn-helix domain, rpiR family AVR83_RS12840 PF01380 SIS domain AVR83_RS12845 PF00132 Bacterial transferase hexapeptide (six repeats) AVR83_RS12845 PF14602 Hexapeptide repeat of succinyl-transferase AVR83_RS12845 PF12464 Maltose acetyltransferase AVR83_RS12850 PF13419 Haloacid dehalogenase-like hydrolase AVR83_RS12870 PF03960 ArsC family AVR83_RS12880 PF00455 DeoR C terminal sensor domain AVR83_RS12880 PF08220 DeoR-like helix-turn-helix domain AVR83_RS12885 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVR83_RS12885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVR83_RS12890 PF07687 Peptidase dimerisation domain AVR83_RS12890 PF01546 Peptidase family M20/M25/M40 AVR83_RS12900 PF07690 Major Facilitator Superfamily AVR83_RS12905 PF03952 Enolase, N-terminal domain AVR83_RS12905 PF00113 Enolase, C-terminal TIM barrel domain AVR83_RS12910 PF00403 Heavy-metal-associated domain AVR83_RS12930 PF01047 MarR family AVR83_RS12940 PF02896 PEP-utilising enzyme, TIM barrel domain AVR83_RS12940 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AVR83_RS12940 PF00391 PEP-utilising enzyme, mobile domain AVR83_RS12950 PF00005 ABC transporter AVR83_RS12950 PF13732 Domain of unknown function (DUF4162) AVR83_RS12955 PF01061 ABC-2 type transporter AVR83_RS12965 PF04816 tRNA (adenine(22)-N(1))-methyltransferase AVR83_RS12970 PF01784 NIF3 (NGG1p interacting factor 3) AVR83_RS12975 PF01546 Peptidase family M20/M25/M40 AVR83_RS12975 PF07687 Peptidase dimerisation domain AVR83_RS12980 PF10431 C-terminal, D2-small domain, of ClpB protein AVR83_RS12980 PF02861 Clp amino terminal domain, pathogenicity island component AVR83_RS12980 PF00004 ATPase family associated with various cellular activities (AAA) AVR83_RS12980 PF17871 AAA lid domain AVR83_RS12980 PF07724 AAA domain (Cdc48 subfamily) AVR83_RS12990 PF07733 Bacterial DNA polymerase III alpha NTPase domain AVR83_RS12990 PF02811 PHP domain AVR83_RS12990 PF14579 Helix-hairpin-helix motif AVR83_RS12990 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AVR83_RS12990 PF01336 OB-fold nucleic acid binding domain AVR83_RS12995 PF00365 Phosphofructokinase AVR83_RS13000 PF02887 Pyruvate kinase, alpha/beta domain AVR83_RS13000 PF00224 Pyruvate kinase, barrel domain AVR83_RS13000 PF00391 PEP-utilising enzyme, mobile domain AVR83_RS13005 PF04284 Protein of unknown function (DUF441) AVR83_RS13010 PF13509 S1 domain AVR83_RS13010 PF17783 CvfB-like winged helix domain AVR83_RS13015 PF00589 Phage integrase family AVR83_RS13015 PF02899 Phage integrase, N-terminal SAM-like domain AVR83_RS13020 PF00583 Acetyltransferase (GNAT) family AVR83_RS13025 PF02616 Segregation and condensation protein ScpA AVR83_RS13030 PF04079 Segregation and condensation complex subunit ScpB AVR83_RS13035 PF00849 RNA pseudouridylate synthase AVR83_RS13035 PF01479 S4 domain AVR83_RS13040 PF12822 ECF transporter, substrate-specific component AVR83_RS13050 PF00270 DEAD/DEAH box helicase AVR83_RS13050 PF00271 Helicase conserved C-terminal domain AVR83_RS13060 PF02224 Cytidylate kinase AVR83_RS13065 PF00575 S1 RNA binding domain AVR83_RS13070 PF01926 50S ribosome-binding GTPase AVR83_RS13070 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AVR83_RS13075 PF00216 Bacterial DNA-binding protein AVR83_RS13090 PF05173 Dihydrodipicolinate reductase, C-terminus AVR83_RS13090 PF01113 Dihydrodipicolinate reductase, N-terminus AVR83_RS13095 PF01743 Poly A polymerase head domain AVR83_RS13095 PF12627 Probable RNA and SrmB- binding site of polymerase A AVR83_RS13095 PF13735 tRNA nucleotidyltransferase domain 2 putative AVR83_RS13105 PF12848 ABC transporter AVR83_RS13105 PF00005 ABC transporter AVR83_RS13105 PF16326 ABC transporter C-terminal domain AVR83_RS13110 PF00303 Thymidylate synthase AVR83_RS13115 PF00186 Dihydrofolate reductase AVR83_RS13120 PF02645 Uncharacterised protein, DegV family COG1307 AVR83_RS13125 PF13472 GDSL-like Lipase/Acylhydrolase family AVR83_RS13130 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) AVR83_RS13135 PF06855 YozE SAM-like fold AVR83_RS13140 PF01471 Putative peptidoglycan binding domain AVR83_RS13140 PF03572 Peptidase family S41 AVR83_RS13140 PF17820 PDZ domain AVR83_RS13155 PF16193 AAA C-terminal domain AVR83_RS13155 PF12002 MgsA AAA+ ATPase C terminal AVR83_RS13155 PF05496 Holliday junction DNA helicase RuvB P-loop domain AVR83_RS13160 PF08240 Alcohol dehydrogenase GroES-like domain AVR83_RS13160 PF00107 Zinc-binding dehydrogenase AVR83_RS13165 PF01638 HxlR-like helix-turn-helix AVR83_RS13170 PF01177 Asp/Glu/Hydantoin racemase AVR83_RS13175 PF00535 Glycosyl transferase family 2 AVR83_RS13190 PF01926 50S ribosome-binding GTPase AVR83_RS13195 PF01985 CRS1 / YhbY (CRM) domain AVR83_RS13200 PF01467 Cytidylyltransferase-like AVR83_RS13205 PF01966 HD domain AVR83_RS13215 PF13649 Methyltransferase domain AVR83_RS13220 PF05636 HIGH Nucleotidyl Transferase AVR83_RS13240 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AVR83_RS13240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVR83_RS13245 PF00004 ATPase family associated with various cellular activities (AAA) AVR83_RS13245 PF16193 AAA C-terminal domain AVR83_RS13245 PF12002 MgsA AAA+ ATPase C terminal AVR83_RS13250 PF00072 Response regulator receiver domain AVR83_RS13250 PF00486 Transcriptional regulatory protein, C terminal AVR83_RS13255 PF00512 His Kinase A (phospho-acceptor) domain AVR83_RS13255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVR83_RS13255 PF18719 ArlS sensor domain AVR83_RS13265 PF13476 AAA domain AVR83_RS13270 PF12320 Type 5 capsule protein repressor C-terminal domain AVR83_RS13270 PF00149 Calcineurin-like phosphoesterase AVR83_RS13280 PF02096 60Kd inner membrane protein AVR83_RS13285 PF00708 Acylphosphatase AVR83_RS13290 PF08032 RNA 2'-O ribose methyltransferase substrate binding AVR83_RS13290 PF00588 SpoU rRNA Methylase family AVR83_RS13300 PF01638 HxlR-like helix-turn-helix AVR83_RS13305 PF01409 tRNA synthetases class II core domain (F) AVR83_RS13305 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AVR83_RS13310 PF03484 tRNA synthetase B5 domain AVR83_RS13310 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AVR83_RS13310 PF03147 Ferredoxin-fold anticodon binding domain AVR83_RS13310 PF01588 Putative tRNA binding domain AVR83_RS13310 PF03483 B3/4 domain AVR83_RS13315 PF02618 YceG-like family AVR83_RS13320 PF00485 Phosphoribulokinase / Uridine kinase family AVR83_RS13325 PF01272 Transcription elongation factor, GreA/GreB, C-term AVR83_RS13325 PF03449 Transcription elongation factor, N-terminal AVR83_RS13340 PF01521 Iron-sulphur cluster biosynthesis AVR83_RS13350 PF03717 Penicillin-binding Protein dimerisation domain AVR83_RS13350 PF00905 Penicillin binding protein transpeptidase domain AVR83_RS13355 PF01812 5-formyltetrahydrofolate cyclo-ligase family AVR83_RS13360 PF01694 Rhomboid family AVR83_RS13370 PF00480 ROK family AVR83_RS13390 PF03009 Glycerophosphoryl diester phosphodiesterase family AVR83_RS13400 PF13411 MerR HTH family regulatory protein AVR83_RS13405 PF00120 Glutamine synthetase, catalytic domain AVR83_RS13405 PF03951 Glutamine synthetase, beta-Grasp domain AVR83_RS13445 PF00829 Ribosomal prokaryotic L21 protein AVR83_RS13455 PF01016 Ribosomal L27 protein AVR83_RS13460 PF01321 Creatinase/Prolidase N-terminal domain AVR83_RS13460 PF00557 Metallopeptidase family M24 AVR83_RS13465 PF09285 Elongation factor P, C-terminal AVR83_RS13465 PF08207 Elongation factor P (EF-P) KOW-like domain AVR83_RS13465 PF01132 Elongation factor P (EF-P) OB domain AVR83_RS13470 PF03780 Asp23 family, cell envelope-related function AVR83_RS13475 PF01029 NusB family AVR83_RS13480 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AVR83_RS13480 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AVR83_RS13485 PF02601 Exonuclease VII, large subunit AVR83_RS13485 PF13742 OB-fold nucleic acid binding domain AVR83_RS13490 PF02609 Exonuclease VII small subunit AVR83_RS13495 PF00348 Polyprenyl synthetase AVR83_RS13500 PF01728 FtsJ-like methyltransferase AVR83_RS13500 PF01479 S4 domain AVR83_RS13505 PF01316 Arginine repressor, DNA binding domain AVR83_RS13505 PF02863 Arginine repressor, C-terminal domain AVR83_RS13510 PF13476 AAA domain AVR83_RS13515 PF00571 CBS domain AVR83_RS13515 PF00005 ABC transporter AVR83_RS13520 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS13525 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AVR83_RS13530 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS13540 PF00625 Guanylate kinase AVR83_RS13545 PF01192 RNA polymerase Rpb6 AVR83_RS13550 PF04127 DNA / pantothenate metabolism flavoprotein AVR83_RS13550 PF02441 Flavoprotein AVR83_RS13555 PF17764 3′ DNA-binding domain (3′BD) AVR83_RS13555 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AVR83_RS13555 PF04851 Type III restriction enzyme, res subunit AVR83_RS13555 PF18074 Primosomal protein N C-terminal domain AVR83_RS13555 PF00271 Helicase conserved C-terminal domain AVR83_RS13560 PF02911 Formyl transferase, C-terminal domain AVR83_RS13560 PF00551 Formyl transferase AVR83_RS13565 PF01029 NusB family AVR83_RS13565 PF01189 16S rRNA methyltransferase RsmB/F AVR83_RS13575 PF00069 Protein kinase domain AVR83_RS13575 PF03793 PASTA domain AVR83_RS13580 PF16745 RsgA N-terminal domain AVR83_RS13580 PF03193 RsgA GTPase AVR83_RS13585 PF00834 Ribulose-phosphate 3 epimerase family AVR83_RS13590 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain AVR83_RS13590 PF04263 Thiamin pyrophosphokinase, catalytic domain AVR83_RS13595 PF00830 Ribosomal L28 family AVR83_RS13600 PF03780 Asp23 family, cell envelope-related function AVR83_RS13605 PF02734 DAK2 domain AVR83_RS13605 PF13684 Dihydroxyacetone kinase family AVR83_RS13610 PF00270 DEAD/DEAH box helicase AVR83_RS13610 PF00271 Helicase conserved C-terminal domain AVR83_RS13610 PF17191 RecG wedge domain AVR83_RS13615 PF02504 Fatty acid synthesis protein AVR83_RS13620 PF00550 Phosphopantetheine attachment site AVR83_RS13625 PF14622 Ribonuclease-III-like AVR83_RS13625 PF00035 Double-stranded RNA binding motif AVR83_RS13630 PF06470 SMC proteins Flexible Hinge Domain AVR83_RS13630 PF02463 RecF/RecN/SMC N terminal domain AVR83_RS13635 PF00448 SRP54-type protein, GTPase domain AVR83_RS13635 PF02881 SRP54-type protein, helical bundle domain AVR83_RS13640 PF04297 Putative helix-turn-helix protein, YlxM / p13 like AVR83_RS13645 PF00448 SRP54-type protein, GTPase domain AVR83_RS13645 PF02881 SRP54-type protein, helical bundle domain AVR83_RS13645 PF02978 Signal peptide binding domain AVR83_RS13650 PF00886 Ribosomal protein S16 AVR83_RS13660 PF01782 RimM N-terminal domain AVR83_RS13660 PF05239 PRC-barrel domain AVR83_RS13665 PF01746 tRNA (Guanine-1)-methyltransferase AVR83_RS13670 PF01245 Ribosomal protein L19 AVR83_RS13690 PF00005 ABC transporter AVR83_RS13700 PF04715 Anthranilate synthase component I, N terminal region AVR83_RS13700 PF00425 chorismate binding enzyme AVR83_RS13705 PF00591 Glycosyl transferase family, a/b domain AVR83_RS13705 PF00117 Glutamine amidotransferase class-I AVR83_RS13705 PF02885 Glycosyl transferase family, helical bundle domain AVR83_RS13710 PF00591 Glycosyl transferase family, a/b domain AVR83_RS13710 PF02885 Glycosyl transferase family, helical bundle domain AVR83_RS13715 PF00218 Indole-3-glycerol phosphate synthase AVR83_RS13720 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AVR83_RS13725 PF00291 Pyridoxal-phosphate dependent enzyme AVR83_RS13730 PF00290 Tryptophan synthase alpha chain AVR83_RS13755 PF07687 Peptidase dimerisation domain AVR83_RS13755 PF01546 Peptidase family M20/M25/M40 AVR83_RS13760 PF08240 Alcohol dehydrogenase GroES-like domain AVR83_RS13760 PF00107 Zinc-binding dehydrogenase AVR83_RS13770 PF00106 short chain dehydrogenase AVR83_RS13780 PF07977 FabA-like domain AVR83_RS13785 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AVR83_RS13785 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AVR83_RS13790 PF00550 Phosphopantetheine attachment site AVR83_RS13795 PF00698 Acyl transferase domain AVR83_RS13805 PF00109 Beta-ketoacyl synthase, N-terminal domain AVR83_RS13805 PF02801 Beta-ketoacyl synthase, C-terminal domain AVR83_RS13810 PF00364 Biotin-requiring enzyme AVR83_RS13815 PF07977 FabA-like domain AVR83_RS13820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVR83_RS13820 PF00289 Biotin carboxylase, N-terminal domain AVR83_RS13820 PF02785 Biotin carboxylase C-terminal domain AVR83_RS13825 PF01039 Carboxyl transferase domain AVR83_RS13830 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AVR83_RS13845 PF04474 Protein of unknown function (DUF554) AVR83_RS13850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVR83_RS13850 PF03466 LysR substrate binding domain AVR83_RS13855 PF03061 Thioesterase superfamily AVR83_RS13860 PF03193 RsgA GTPase AVR83_RS13870 PF07690 Major Facilitator Superfamily AVR83_RS13920 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AVR83_RS13935 PF03073 TspO/MBR family AVR83_RS13945 PF05656 Protein of unknown function (DUF805) AVR83_RS13950 PF00781 Diacylglycerol kinase catalytic domain AVR83_RS13960 PF04226 Transglycosylase associated protein AVR83_RS13965 PF05532 CsbD-like AVR83_RS13975 PF03577 Peptidase family C69 AVR83_RS13980 PF01361 Tautomerase enzyme AVR83_RS13985 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AVR83_RS13985 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AVR83_RS14010 PF00202 Aminotransferase class-III AVR83_RS14015 PF13520 Amino acid permease AVR83_RS14025 PF17126 RsmF rRNA methyltransferase first C-terminal domain AVR83_RS14025 PF01189 16S rRNA methyltransferase RsmB/F AVR83_RS14025 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AVR83_RS14040 PF03636 Glycosyl hydrolase family 65, N-terminal domain AVR83_RS14040 PF03632 Glycosyl hydrolase family 65 central catalytic domain AVR83_RS14040 PF03633 Glycosyl hydrolase family 65, C-terminal domain AVR83_RS14045 PF01263 Aldose 1-epimerase AVR83_RS14050 PF01070 FMN-dependent dehydrogenase AVR83_RS14055 PF00288 GHMP kinases N terminal domain AVR83_RS14055 PF08544 GHMP kinases C terminal AVR83_RS14065 PF00288 GHMP kinases N terminal domain AVR83_RS14070 PF13307 Helicase C-terminal domain AVR83_RS14070 PF00929 Exonuclease AVR83_RS14070 PF04851 Type III restriction enzyme, res subunit AVR83_RS14080 PF00155 Aminotransferase class I and II AVR83_RS14085 PF01336 OB-fold nucleic acid binding domain AVR83_RS14085 PF00152 tRNA synthetases class II (D, K and N) AVR83_RS14100 PF00005 ABC transporter AVR83_RS14100 PF09383 NIL domain AVR83_RS14105 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS14110 PF03180 NLPA lipoprotein AVR83_RS14120 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS14125 PF01547 Bacterial extracellular solute-binding protein AVR83_RS14130 PF00005 ABC transporter AVR83_RS14130 PF08402 TOBE domain AVR83_RS14135 PF00912 Transglycosylase AVR83_RS14135 PF00905 Penicillin binding protein transpeptidase domain AVR83_RS14140 PF03838 Recombination protein U AVR83_RS14145 PF06908 YspA SLOG family AVR83_RS14150 PF05103 DivIVA protein AVR83_RS14160 PF02926 THUMP domain AVR83_RS14160 PF01170 Putative RNA methylase family UPF0020 AVR83_RS14165 PF00326 Prolyl oligopeptidase family AVR83_RS14175 PF00535 Glycosyl transferase family 2 AVR83_RS14195 PF02016 LD-carboxypeptidase N-terminal domain AVR83_RS14195 PF17676 LD-carboxypeptidase C-terminal domain AVR83_RS14205 PF00005 ABC transporter AVR83_RS14220 PF01266 FAD dependent oxidoreductase AVR83_RS14235 PF01268 Formate--tetrahydrofolate ligase AVR83_RS14240 PF01252 Signal peptidase (SPase) II AVR83_RS14245 PF00849 RNA pseudouridylate synthase AVR83_RS14245 PF01479 S4 domain AVR83_RS14250 PF00156 Phosphoribosyl transferase domain AVR83_RS14255 PF00117 Glutamine amidotransferase class-I AVR83_RS14255 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AVR83_RS14260 PF02142 MGS-like domain AVR83_RS14260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AVR83_RS14260 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AVR83_RS14270 PF00300 Histidine phosphatase superfamily (branch 1) AVR83_RS14275 PF08818 Domain of unknown function (DU1801) AVR83_RS14300 PF00005 ABC transporter AVR83_RS14310 PF05670 NFACT protein RNA binding domain AVR83_RS14320 PF02645 Uncharacterised protein, DegV family COG1307 AVR83_RS14375 PF00324 Amino acid permease AVR83_RS14395 PF02652 L-lactate permease AVR83_RS14405 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AVR83_RS14410 PF08240 Alcohol dehydrogenase GroES-like domain AVR83_RS14410 PF16912 Glucose dehydrogenase C-terminus AVR83_RS14415 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AVR83_RS14420 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AVR83_RS14425 PF13673 Acetyltransferase (GNAT) domain AVR83_RS14430 PF01047 MarR family AVR83_RS14435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVR83_RS14435 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVR83_RS14465 PF01625 Peptide methionine sulfoxide reductase AVR83_RS14470 PF01641 SelR domain AVR83_RS14475 PF01368 DHH family AVR83_RS14475 PF02833 DHHA2 domain AVR83_RS14480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVR83_RS14480 PF03466 LysR substrate binding domain AVR83_RS14485 PF00521 DNA gyrase/topoisomerase IV, subunit A AVR83_RS14485 PF03989 DNA gyrase C-terminal domain, beta-propeller AVR83_RS14490 PF00986 DNA gyrase B subunit, carboxyl terminus AVR83_RS14490 PF01751 Toprim domain AVR83_RS14490 PF00204 DNA gyrase B AVR83_RS14490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVR83_RS14495 PF02660 Glycerol-3-phosphate acyltransferase AVR83_RS14500 PF01263 Aldose 1-epimerase AVR83_RS14505 PF00004 ATPase family associated with various cellular activities (AAA) AVR83_RS14505 PF10431 C-terminal, D2-small domain, of ClpB protein AVR83_RS14505 PF07724 AAA domain (Cdc48 subfamily) AVR83_RS14510 PF00227 Proteasome subunit AVR83_RS14515 PF02899 Phage integrase, N-terminal SAM-like domain AVR83_RS14515 PF00589 Phage integrase family AVR83_RS14520 PF01134 Glucose inhibited division protein A AVR83_RS14525 PF01751 Toprim domain AVR83_RS14525 PF01131 DNA topoisomerase AVR83_RS14525 PF01396 Topoisomerase DNA binding C4 zinc finger AVR83_RS14530 PF02481 DNA recombination-mediator protein A AVR83_RS14530 PF18255 DNA processing protein A sterile alpha motif domain AVR83_RS14535 PF01351 Ribonuclease HII AVR83_RS14540 PF01926 50S ribosome-binding GTPase AVR83_RS14545 PF01717 Cobalamin-independent synthase, Catalytic domain AVR83_RS14550 PF03466 LysR substrate binding domain AVR83_RS14550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVR83_RS14565 PF07690 Major Facilitator Superfamily AVR83_RS14575 PF00453 Ribosomal protein L20 AVR83_RS14580 PF01632 Ribosomal protein L35 AVR83_RS14585 PF00707 Translation initiation factor IF-3, C-terminal domain AVR83_RS14585 PF05198 Translation initiation factor IF-3, N-terminal domain AVR83_RS14590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AVR83_RS14590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AVR83_RS14590 PF03129 Anticodon binding domain AVR83_RS14590 PF02824 TGS domain AVR83_RS14595 PF07319 Primosomal protein DnaI N-terminus AVR83_RS14595 PF01695 IstB-like ATP binding protein AVR83_RS14600 PF07261 Replication initiation and membrane attachment AVR83_RS14605 PF03477 ATP cone domain AVR83_RS14610 PF01121 Dephospho-CoA kinase AVR83_RS14615 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AVR83_RS14615 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AVR83_RS14615 PF06827 Zinc finger found in FPG and IleRS AVR83_RS14620 PF00476 DNA polymerase family A AVR83_RS14620 PF01367 5'-3' exonuclease, C-terminal SAM fold AVR83_RS14620 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AVR83_RS14625 PF01027 Inhibitor of apoptosis-promoting Bax1 AVR83_RS14635 PF01883 Iron-sulfur cluster assembly protein AVR83_RS14640 PF01458 Uncharacterized protein family (UPF0051) AVR83_RS14645 PF01592 NifU-like N terminal domain AVR83_RS14650 PF00266 Aminotransferase class-V AVR83_RS14655 PF01458 Uncharacterized protein family (UPF0051) AVR83_RS14660 PF00005 ABC transporter AVR83_RS14670 PF17910 FeoB cytosolic helical domain AVR83_RS14670 PF07664 Ferrous iron transport protein B C terminus AVR83_RS14670 PF07670 Nucleoside recognition AVR83_RS14670 PF02421 Ferrous iron transport protein B AVR83_RS14675 PF02875 Mur ligase family, glutamate ligase domain AVR83_RS14675 PF08245 Mur ligase middle domain AVR83_RS14675 PF01225 Mur ligase family, catalytic domain AVR83_RS14680 PF01580 FtsK/SpoIIIE family AVR83_RS14680 PF17854 FtsK alpha domain AVR83_RS14680 PF09397 Ftsk gamma domain AVR83_RS14685 PF14794 Domain of unknown function (DUF4479) AVR83_RS14685 PF01588 Putative tRNA binding domain AVR83_RS14695 PF02390 Putative methyltransferase AVR83_RS14700 PF01636 Phosphotransferase enzyme family AVR83_RS14705 PF05975 Bacterial ABC transporter protein EcsB AVR83_RS14710 PF00005 ABC transporter AVR83_RS14715 PF01230 HIT domain AVR83_RS14725 PF00639 PPIC-type PPIASE domain AVR83_RS14755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVR83_RS14755 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVR83_RS14765 PF00027 Cyclic nucleotide-binding domain AVR83_RS14765 PF13545 Crp-like helix-turn-helix domain AVR83_RS14780 PF00885 6,7-dimethyl-8-ribityllumazine synthase AVR83_RS14785 PF00925 GTP cyclohydrolase II AVR83_RS14785 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AVR83_RS14790 PF00677 Lumazine binding domain AVR83_RS14795 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AVR83_RS14795 PF01872 RibD C-terminal domain AVR83_RS14815 PF00535 Glycosyl transferase family 2 AVR83_RS14820 PF09335 SNARE associated Golgi protein AVR83_RS14825 PF00535 Glycosyl transferase family 2 AVR83_RS14835 PF00486 Transcriptional regulatory protein, C terminal AVR83_RS14835 PF00072 Response regulator receiver domain AVR83_RS14840 PF00512 His Kinase A (phospho-acceptor) domain AVR83_RS14840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AVR83_RS14840 PF00672 HAMP domain AVR83_RS14855 PF04205 FMN-binding domain AVR83_RS14855 PF03358 NADPH-dependent FMN reductase AVR83_RS14855 PF00890 FAD binding domain AVR83_RS14860 PF04205 FMN-binding domain AVR83_RS14860 PF03358 NADPH-dependent FMN reductase AVR83_RS14860 PF00890 FAD binding domain AVR83_RS14865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVR83_RS14865 PF03466 LysR substrate binding domain AVR83_RS14880 PF01966 HD domain AVR83_RS14885 PF13514 AAA domain AVR83_RS14890 PF00149 Calcineurin-like phosphoesterase AVR83_RS14895 PF06133 Control of competence regulator ComK, YlbF/YmcA AVR83_RS14900 PF00905 Penicillin binding protein transpeptidase domain AVR83_RS14900 PF00912 Transglycosylase AVR83_RS14905 PF02863 Arginine repressor, C-terminal domain AVR83_RS14905 PF01316 Arginine repressor, DNA binding domain AVR83_RS14910 PF00155 Aminotransferase class I and II AVR83_RS14920 PF00155 Aminotransferase class I and II AVR83_RS14920 PF00392 Bacterial regulatory proteins, gntR family AVR83_RS14925 PF00550 Phosphopantetheine attachment site AVR83_RS14930 PF03734 L,D-transpeptidase catalytic domain AVR83_RS14940 PF00232 Glycosyl hydrolase family 1 AVR83_RS14945 PF02378 Phosphotransferase system, EIIC AVR83_RS14950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AVR83_RS14955 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AVR83_RS14965 PF00158 Sigma-54 interaction domain AVR83_RS14965 PF00874 PRD domain AVR83_RS14975 PF00005 ABC transporter AVR83_RS14975 PF02687 FtsX-like permease family AVR83_RS14975 PF12704 MacB-like periplasmic core domain AVR83_RS14985 PF00750 tRNA synthetases class I (R) AVR83_RS14985 PF05746 DALR anticodon binding domain AVR83_RS14985 PF03485 Arginyl tRNA synthetase N terminal domain AVR83_RS14990 PF13673 Acetyltransferase (GNAT) domain AVR83_RS15010 PF01554 MatE AVR83_RS15015 PF02080 TrkA-C domain AVR83_RS15015 PF03600 Citrate transporter AVR83_RS15025 PF02272 DHHA1 domain AVR83_RS15025 PF01368 DHH family AVR83_RS15035 PF14306 PUA-like domain AVR83_RS15035 PF01747 ATP-sulfurylase AVR83_RS15045 PF08267 Cobalamin-independent synthase, N-terminal domain AVR83_RS15045 PF01717 Cobalamin-independent synthase, Catalytic domain AVR83_RS15050 PF02219 Methylenetetrahydrofolate reductase AVR83_RS15050 PF02574 Homocysteine S-methyltransferase AVR83_RS15055 PF07457 Protein of unknown function (DUF1516) AVR83_RS15120 PF00877 NlpC/P60 family AVR83_RS15290 PF01381 Helix-turn-helix AVR83_RS15300 PF07885 Ion channel AVR83_RS15300 PF02254 TrkA-N domain AVR83_RS15325 PF17760 UvrA interaction domain AVR83_RS15325 PF17755 UvrA DNA-binding domain AVR83_RS15325 PF00005 ABC transporter AVR83_RS15340 PF01047 MarR family AVR83_RS15360 PF04397 LytTr DNA-binding domain AVR83_RS15360 PF00072 Response regulator receiver domain AVR83_RS15390 PF13411 MerR HTH family regulatory protein AVR83_RS15395 PF01625 Peptide methionine sulfoxide reductase AVR83_RS15405 PF00072 Response regulator receiver domain AVR83_RS15405 PF04397 LytTr DNA-binding domain AVR83_RS15410 PF00005 ABC transporter AVR83_RS15425 PF01741 Large-conductance mechanosensitive channel, MscL AVR83_RS15430 PF01712 Deoxynucleoside kinase AVR83_RS15435 PF03009 Glycerophosphoryl diester phosphodiesterase family AVR83_RS15445 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS15450 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS15465 PF01546 Peptidase family M20/M25/M40 AVR83_RS15470 PF01256 Carbohydrate kinase AVR83_RS15475 PF00849 RNA pseudouridylate synthase AVR83_RS15475 PF01479 S4 domain AVR83_RS15480 PF14667 Polysaccharide biosynthesis C-terminal domain AVR83_RS15480 PF01943 Polysaccharide biosynthesis protein AVR83_RS15485 PF08264 Anticodon-binding domain of tRNA AVR83_RS15485 PF00133 tRNA synthetases class I (I, L, M and V) AVR83_RS15485 PF09334 tRNA synthetases class I (M) AVR83_RS15485 PF13603 Leucyl-tRNA synthetase, Domain 2 AVR83_RS15490 PF01569 PAP2 superfamily AVR83_RS15495 PF06962 Putative rRNA methylase AVR83_RS15505 PF00534 Glycosyl transferases group 1 AVR83_RS15510 PF00534 Glycosyl transferases group 1 AVR83_RS15510 PF00862 Sucrose synthase AVR83_RS15530 PF07690 Major Facilitator Superfamily AVR83_RS15535 PF00438 S-adenosylmethionine synthetase, N-terminal domain AVR83_RS15535 PF02772 S-adenosylmethionine synthetase, central domain AVR83_RS15535 PF02773 S-adenosylmethionine synthetase, C-terminal domain AVR83_RS15545 PF00862 Sucrose synthase AVR83_RS15545 PF00534 Glycosyl transferases group 1 AVR83_RS15550 PF02574 Homocysteine S-methyltransferase AVR83_RS15555 PF00324 Amino acid permease AVR83_RS15560 PF00762 Ferrochelatase AVR83_RS15565 PF01566 Natural resistance-associated macrophage protein AVR83_RS15570 PF00149 Calcineurin-like phosphoesterase AVR83_RS15590 PF00156 Phosphoribosyl transferase domain AVR83_RS15680 PF00884 Sulfatase AVR83_RS15685 PF08796 Protein of unknown function (DUF1797) AVR83_RS15690 PF00155 Aminotransferase class I and II AVR83_RS15695 PF07943 Penicillin-binding protein 5, C-terminal domain AVR83_RS15695 PF00768 D-alanyl-D-alanine carboxypeptidase AVR83_RS15705 PF00534 Glycosyl transferases group 1 AVR83_RS15705 PF13439 Glycosyltransferase Family 4 AVR83_RS15710 PF13439 Glycosyltransferase Family 4 AVR83_RS15710 PF00534 Glycosyl transferases group 1 AVR83_RS15715 PF00391 PEP-utilising enzyme, mobile domain AVR83_RS15715 PF05524 PEP-utilising enzyme, N-terminal AVR83_RS15715 PF02896 PEP-utilising enzyme, TIM barrel domain AVR83_RS15720 PF00381 PTS HPr component phosphorylation site AVR83_RS15730 PF00004 ATPase family associated with various cellular activities (AAA) AVR83_RS15730 PF10431 C-terminal, D2-small domain, of ClpB protein AVR83_RS15730 PF07724 AAA domain (Cdc48 subfamily) AVR83_RS15730 PF17871 AAA lid domain AVR83_RS15735 PF00589 Phage integrase family AVR83_RS15745 PF00005 ABC transporter AVR83_RS15745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVR83_RS15750 PF00005 ABC transporter AVR83_RS15750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AVR83_RS15755 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS15755 PF12911 N-terminal TM domain of oligopeptide transport permease C AVR83_RS15760 PF00528 Binding-protein-dependent transport system inner membrane component AVR83_RS15765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AVR83_RS15780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AVR83_RS15780 PF03466 LysR substrate binding domain AVR83_RS15795 PF16658 Class II release factor RF3, C-terminal domain AVR83_RS15795 PF03144 Elongation factor Tu domain 2 AVR83_RS15795 PF00009 Elongation factor Tu GTP binding domain AVR83_RS15800 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVR83_RS15800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVR83_RS15805 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AVR83_RS15805 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AVR83_RS15810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AVR83_RS15810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AVR83_RS15815 PF02447 GntP family permease AVR83_RS15820 PF01467 Cytidylyltransferase-like AVR83_RS15825 PF01594 AI-2E family transporter AVR83_RS15830 PF00056 lactate/malate dehydrogenase, NAD binding domain AVR83_RS15830 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AVR83_RS15835 PF00144 Beta-lactamase AVR83_RS15850 PF01476 LysM domain AVR83_RS15850 PF00877 NlpC/P60 family AVR83_RS15850 PF08239 Bacterial SH3 domain AVR83_RS15855 PF04167 Protein of unknown function (DUF402) AVR83_RS15860 PF02631 RecX family AVR83_RS15895 PF02397 Bacterial sugar transferase AVR83_RS15910 PF00746 LPXTG cell wall anchor motif AVR83_RS15915 PF12833 Helix-turn-helix domain AVR83_RS15950 PF03275 UDP-galactopyranose mutase AVR83_RS16050 PF04230 Polysaccharide pyruvyl transferase AVR83_RS16065 PF00534 Glycosyl transferases group 1 AVR83_RS16065 PF13439 Glycosyltransferase Family 4 AVR83_RS16075 PF02397 Bacterial sugar transferase AVR83_RS16080 PF16363 GDP-mannose 4,6 dehydratase AVR83_RS16090 PF13614 AAA domain AVR83_RS16100 PF00589 Phage integrase family AVR83_RS16105 PF16363 GDP-mannose 4,6 dehydratase AVR83_RS16115 PF01467 Cytidylyltransferase-like AVR83_RS16120 PF14667 Polysaccharide biosynthesis C-terminal domain AVR83_RS16120 PF01943 Polysaccharide biosynthesis protein AVR83_RS16130 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AVR83_RS16135 PF00534 Glycosyl transferases group 1 AVR83_RS16135 PF13439 Glycosyltransferase Family 4 AVR83_RS16165 PF03275 UDP-galactopyranose mutase AVR83_RS16170 PF00230 Major intrinsic protein AVR83_RS16180 PF02350 UDP-N-acetylglucosamine 2-epimerase AVR83_RS16190 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AVR83_RS16190 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AVR83_RS16215 PF02378 Phosphotransferase system, EIIC AVR83_RS16390 PF00253 Ribosomal protein S14p/S29e AVR83_RS16395 PF00471 Ribosomal protein L33 AVR83_RS16405 PF00324 Amino acid permease AVR83_RS16415 PF01566 Natural resistance-associated macrophage protein AVR83_RS16435 PF12826 Helix-hairpin-helix motif AVR83_RS16435 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AVR83_RS16435 PF03120 NAD-dependent DNA ligase OB-fold domain AVR83_RS16435 PF01653 NAD-dependent DNA ligase adenylation domain AVR83_RS16435 PF00533 BRCA1 C Terminus (BRCT) domain AVR83_RS16470 PF11798 IMS family HHH motif AVR83_RS16470 PF11799 impB/mucB/samB family C-terminal domain AVR83_RS16470 PF00817 impB/mucB/samB family AVR83_RS16485 PF13614 AAA domain AVR83_RS16490 PF08708 Primase C terminal 1 (PriCT-1) AVR83_RS16590 PF01751 Toprim domain AVR83_RS16590 PF01131 DNA topoisomerase AVR83_RS16605 PF13154 Protein of unknown function (DUF3991) AVR83_RS16620 PF07724 AAA domain (Cdc48 subfamily) AVR83_RS16620 PF00004 ATPase family associated with various cellular activities (AAA) AVR83_RS16620 PF10431 C-terminal, D2-small domain, of ClpB protein AVR83_RS16620 PF17871 AAA lid domain AVR83_RS16640 PF18652 Adhesin P1 N-terminal domain AVR83_RS16640 PF17998 Cell surface antigen I/II C2 terminal domain AVR83_RS16640 PF06696 Streptococcal surface antigen repeat AVR83_RS16640 PF16364 Cell surface antigen C-terminus AVR83_RS16640 PF08363 Glucan-binding protein C AVR83_RS16665 PF01966 HD domain AVR83_RS16670 PF07690 Major Facilitator Superfamily AVR83_RS16705 PF07690 Major Facilitator Superfamily AVR83_RS16760 PF03389 MobA/MobL family AVR83_RS16760 PF17841 BID domain of Bartonella effector protein (Bep) AVR83_RS16760 PF01443 Viral (Superfamily 1) RNA helicase AVR83_RS16765 PF01131 DNA topoisomerase AVR83_RS16765 PF01751 Toprim domain AVR83_RS16790 PF07992 Pyridine nucleotide-disulphide oxidoreductase AVR83_RS16790 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AVR83_RS16795 PF01022 Bacterial regulatory protein, arsR family AVR83_RS16800 PF02040 Arsenical pump membrane protein AVR83_RS16820 PF02796 Helix-turn-helix domain of resolvase AVR83_RS16820 PF00239 Resolvase, N terminal domain AVR83_RS16825 PF06874 Firmicute fructose-1,6-bisphosphatase AVR83_RS16835 PF02796 Helix-turn-helix domain of resolvase AVR83_RS16835 PF00239 Resolvase, N terminal domain AVR83_RS16840 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AVR83_RS16840 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AVR83_RS16855 PF01520 N-acetylmuramoyl-L-alanine amidase AVR83_RS16855 PF08239 Bacterial SH3 domain AVR83_RS16860 PF00253 Ribosomal protein S14p/S29e AVR83_RS16865 PF00471 Ribosomal protein L33 AVR83_RS16875 PF00324 Amino acid permease AVR83_RS16885 PF01566 Natural resistance-associated macrophage protein AVR83_RS16905 PF00533 BRCA1 C Terminus (BRCT) domain AVR83_RS16905 PF01653 NAD-dependent DNA ligase adenylation domain AVR83_RS16905 PF03120 NAD-dependent DNA ligase OB-fold domain AVR83_RS16905 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AVR83_RS16905 PF12826 Helix-hairpin-helix motif AVR83_RS16965 PF08708 Primase C terminal 1 (PriCT-1) AVR83_RS16970 PF13614 AAA domain AVR83_RS17035 PF00239 Resolvase, N terminal domain AVR83_RS17035 PF02796 Helix-turn-helix domain of resolvase AVR83_RS17040 PF01047 MarR family AVR83_RS17080 PF00004 ATPase family associated with various cellular activities (AAA) AVR83_RS17080 PF07724 AAA domain (Cdc48 subfamily) AVR83_RS17080 PF17871 AAA lid domain AVR83_RS17080 PF10431 C-terminal, D2-small domain, of ClpB protein AVR83_RS17095 PF13154 Protein of unknown function (DUF3991) AVR83_RS17110 PF01131 DNA topoisomerase AVR83_RS17110 PF01751 Toprim domain AVR83_RS17235 PF01022 Bacterial regulatory protein, arsR family AVR83_RS17245 PF08708 Primase C terminal 1 (PriCT-1) AVR83_RS17250 PF13614 AAA domain AVR83_RS17260 PF00817 impB/mucB/samB family AVR83_RS17260 PF11799 impB/mucB/samB family C-terminal domain AVR83_RS17260 PF11798 IMS family HHH motif AVR83_RS17310 PF00239 Resolvase, N terminal domain AVR83_RS17310 PF02796 Helix-turn-helix domain of resolvase AVR83_RS17315 PF01047 MarR family AVR83_RS17365 PF13614 AAA domain AVR83_RS17375 PF06970 Replication initiator protein A (RepA) N-terminus AVR83_RS17375 PF18008 Replication initiator protein A C-terminal domain AVR83_RS17400 PF03389 MobA/MobL family AVR83_RS17400 PF16793 RepB DNA-primase from phage plasmid AVR83_RS17420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AVR83_RS17420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AVR83_RS17435 PF00817 impB/mucB/samB family AVR83_RS17435 PF11799 impB/mucB/samB family C-terminal domain AVR83_RS17435 PF11798 IMS family HHH motif AVR83_RS17445 PF04226 Transglycosylase associated protein AVR83_RS17450 PF03780 Asp23 family, cell envelope-related function AVR83_RS17485 PF02796 Helix-turn-helix domain of resolvase AVR83_RS17485 PF00239 Resolvase, N terminal domain AVR83_RS17490 PF06874 Firmicute fructose-1,6-bisphosphatase AVR83_RS17495 PF02705 K+ potassium transporter AVR83_RS17505 PF00239 Resolvase, N terminal domain AVR83_RS17505 PF02796 Helix-turn-helix domain of resolvase AVR83_RS17535 PF02796 Helix-turn-helix domain of resolvase AVR83_RS17535 PF00239 Resolvase, N terminal domain AVR83_RS17540 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AVR83_RS17540 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AVR83_RS17570 PF13614 AAA domain AVR83_RS17580 PF06970 Replication initiator protein A (RepA) N-terminus AVR83_RS17580 PF18008 Replication initiator protein A C-terminal domain AVR83_RS17600 PF00444 Ribosomal protein L36 AVR83_RS17815 PF00468 Ribosomal protein L34 AVR83_RS17900 PF01545 Cation efflux family AVR83_RS17900 PF16916 Dimerisation domain of Zinc Transporter AVR83_RS18200 PF01783 Ribosomal L32p protein family AVR83_RS18210 PF00471 Ribosomal protein L33 AVR83_RS18295 PF01783 Ribosomal L32p protein family AVR83_RS18405 PF01783 Ribosomal L32p protein family AVR83_RS18535 PF02132 RecR protein AVR83_RS18535 PF13662 Toprim domain AVR83_RS18540 PF02575 YbaB/EbfC DNA-binding family