locus-tag	class	description
AVR83_RS00235	COG0513	Belongs to the DEAD box helicase family
AVR83_RS00240	COG0673	inositol 2-dehydrogenase activity
AVR83_RS00245	COG1278	Cold shock
AVR83_RS00260	COG1737	Transcriptional regulator
AVR83_RS00270	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AVR83_RS00285	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AVR83_RS00290	COG1597	lipid kinase activity
AVR83_RS00295	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AVR83_RS00300	COG0154	amidase activity
AVR83_RS00305	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AVR83_RS00310	COG4851	CamS sex pheromone cAM373 precursor
AVR83_RS00315	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AVR83_RS00325	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AVR83_RS00330	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
AVR83_RS00335	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AVR83_RS00340	COG1705	Flagellar rod assembly protein muramidase FlgJ
AVR83_RS00355	COG0142	geranyltranstransferase activity
AVR83_RS00370	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AVR83_RS00375	COG4988	ABC transporter
AVR83_RS00380	COG1294	oxidase, subunit
AVR83_RS00385	COG1271	oxidase subunit
AVR83_RS00395	COG4684	Psort location CytoplasmicMembrane, score
AVR83_RS00400	COG0531	amino acid
AVR83_RS00410	COG0281	malic enzyme
AVR83_RS00415	COG0583	DNA-binding transcription factor activity
AVR83_RS00425	COG0583	DNA-binding transcription factor activity
AVR83_RS00435	COG1053	succinate dehydrogenase
AVR83_RS00440	COG0114	fumarate hydratase activity
AVR83_RS00460	COG3052	prosthetic group binding
AVR83_RS00480	COG0471	metal ion transport
AVR83_RS00485	COG0039	L-malate dehydrogenase activity
AVR83_RS00495	COG0803	Belongs to the bacterial solute-binding protein 9 family
AVR83_RS00500	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AVR83_RS00505	COG1121	(ABC) transporter
AVR83_RS00510	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
AVR83_RS00515	COG1917	Cupin 2, conserved barrel domain protein
AVR83_RS00515	COG4977	sequence-specific DNA binding
AVR83_RS00525	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AVR83_RS00530	COG2151	metal-sulfur cluster biosynthetic enzyme
AVR83_RS00535	COG0471	metal ion transport
AVR83_RS00540	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AVR83_RS00545	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
AVR83_RS00550	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AVR83_RS00555	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AVR83_RS00575	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AVR83_RS00580	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AVR83_RS00585	COG0101	tRNA pseudouridine synthase activity
AVR83_RS00595	COG1122	ATPase activity
AVR83_RS00600	COG1122	ATPase activity
AVR83_RS00610	COG4939	FMN-binding domain protein
AVR83_RS00635	COG0203	ribosomal protein L17
AVR83_RS00640	COG0202	RNA polymerase activity
AVR83_RS00645	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AVR83_RS00650	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AVR83_RS00655	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AVR83_RS00660	COG0563	adenylate kinase activity
AVR83_RS00670	COG0200	Binds to the 23S rRNA
AVR83_RS00675	COG1841	ribosomal large subunit assembly
AVR83_RS00680	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AVR83_RS00685	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AVR83_RS00690	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AVR83_RS00695	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AVR83_RS00700	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AVR83_RS00705	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AVR83_RS00710	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AVR83_RS00715	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AVR83_RS00720	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AVR83_RS00725	COG0255	Belongs to the universal ribosomal protein uL29 family
AVR83_RS00730	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AVR83_RS00735	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AVR83_RS00740	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AVR83_RS00745	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AVR83_RS00750	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AVR83_RS00755	COG0089	rRNA binding
AVR83_RS00760	COG0088	Forms part of the polypeptide exit tunnel
AVR83_RS00765	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AVR83_RS00770	COG0051	transcription antitermination factor activity, RNA binding
AVR83_RS00775	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AVR83_RS00780	COG0049	tRNA binding
AVR83_RS00785	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AVR83_RS00790	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
AVR83_RS00795	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AVR83_RS00800	COG0085	RNA polymerase activity
AVR83_RS00810	COG0542	response to heat
AVR83_RS00815	COG4463	regulation of RNA biosynthetic process
AVR83_RS00855	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AVR83_RS00860	COG1428	Deoxynucleoside kinase
AVR83_RS00870	COG0833	amino acid
AVR83_RS00875	COG0028	Belongs to the TPP enzyme family
AVR83_RS00880	COG1959	2 iron, 2 sulfur cluster binding
AVR83_RS00900	COG1316	TRANSCRIPTIONal
AVR83_RS00910	COG2966	Psort location CytoplasmicMembrane, score
AVR83_RS00915	COG1278	Cold shock
AVR83_RS00935	COG2814	Major facilitator Superfamily
AVR83_RS00965	COG0367	asparagine synthase
AVR83_RS00970	COG0527	aspartate kinase activity
AVR83_RS00975	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AVR83_RS01025	COG0640	Transcriptional regulator
AVR83_RS01030	COG0564	pseudouridine synthase activity
AVR83_RS01035	COG0514	ATP-dependent DNA helicase (RecQ)
AVR83_RS01055	COG4690	dipeptidase activity
AVR83_RS01060	COG2502	aspartate--ammonia ligase
AVR83_RS01065	COG0017	Asparaginyl-tRNA synthetase
AVR83_RS01070	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AVR83_RS01080	COG1053	succinate dehydrogenase
AVR83_RS01085	COG0583	DNA-binding transcription factor activity
AVR83_RS01100	COG0572	uridine kinase
AVR83_RS01125	COG0308	aminopeptidase N
AVR83_RS01155	COG1302	Protein conserved in bacteria
AVR83_RS01170	COG2261	transglycosylase associated protein
AVR83_RS01175	COG2755	lipolytic protein G-D-S-L family
AVR83_RS01175	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AVR83_RS01190	COG2814	Major facilitator Superfamily
AVR83_RS01195	COG1733	regulation of RNA biosynthetic process
AVR83_RS01200	COG1266	CAAX protease self-immunity
AVR83_RS01205	COG1396	sequence-specific DNA binding
AVR83_RS01245	COG0464	growth
AVR83_RS01250	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AVR83_RS01250	COG0519	Catalyzes the synthesis of GMP from XMP
AVR83_RS01255	COG1072	(Pantothenic acid kinase))
AVR83_RS01260	COG2070	2-Nitropropane dioxygenase
AVR83_RS01265	COG3973	AAA domain
AVR83_RS01270	COG0586	Pfam SNARE associated Golgi protein
AVR83_RS01275	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AVR83_RS01275	COG0456	acetyltransferase
AVR83_RS01280	COG0569	domain protein
AVR83_RS01280	COG0475	glutathione-regulated potassium exporter activity
AVR83_RS01285	COG0588	phosphoglycerate mutase activity
AVR83_RS01300	COG2076	Multidrug Resistance protein
AVR83_RS01310	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AVR83_RS01340	COG1846	Transcriptional regulator
AVR83_RS01345	COG0531	amino acid
AVR83_RS01350	COG3394	polysaccharide catabolic process
AVR83_RS01355	COG1263	PTS System
AVR83_RS01355	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AVR83_RS01365	COG1263	PTS System
AVR83_RS01365	COG2190	(PTS) system
AVR83_RS01365	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AVR83_RS01370	COG0765	amino acid transport
AVR83_RS01375	COG0765	amino acid transport
AVR83_RS01380	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AVR83_RS01395	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AVR83_RS01400	COG0436	Aminotransferase
AVR83_RS01405	COG0546	phosphoglycolate phosphatase activity
AVR83_RS01420	COG0735	belongs to the Fur family
AVR83_RS01425	COG0194	GDP metabolic process
AVR83_RS01445	COG0531	amino acid
AVR83_RS01460	COG2936	dipeptidyl-peptidase activity
AVR83_RS01465	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
AVR83_RS01465	COG2755	lipolytic protein G-D-S-L family
AVR83_RS01475	COG2267	carboxylic ester hydrolase activity
AVR83_RS01480	COG0028	Belongs to the TPP enzyme family
AVR83_RS01485	COG0196	riboflavin kinase activity
AVR83_RS01490	COG0028	Belongs to the TPP enzyme family
AVR83_RS01495	COG2252	PERMEase
AVR83_RS01505	COG3475	LICD family
AVR83_RS01515	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AVR83_RS01520	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AVR83_RS01520	COG0248	Ppx GppA phosphatase
AVR83_RS01525	COG0477	Major facilitator Superfamily
AVR83_RS01540	COG1393	Belongs to the ArsC family
AVR83_RS01555	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AVR83_RS01575	COG0778	Nitroreductase
AVR83_RS01590	COG2017	converts alpha-aldose to the beta-anomer
AVR83_RS01600	COG0561	phosphatase activity
AVR83_RS01610	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AVR83_RS01615	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AVR83_RS01640	COG0025	NhaP-type Na H and K H
AVR83_RS01645	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AVR83_RS01655	COG0708	Exodeoxyribonuclease III
AVR83_RS01670	COG0802	atpase or kinase
AVR83_RS01675	COG0280	phosphate acetyltransferase
AVR83_RS01680	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AVR83_RS01685	COG0561	phosphatase activity
AVR83_RS01695	COG1126	abc transporter atp-binding protein
AVR83_RS01700	COG0765	amino acid transport
AVR83_RS01710	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
AVR83_RS01715	COG0557	exoribonuclease II activity
AVR83_RS01725	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AVR83_RS01730	COG0038	chloride channel
AVR83_RS01740	COG0148	phosphopyruvate hydratase activity
AVR83_RS01745	COG0149	triose-phosphate isomerase activity
AVR83_RS01750	COG0126	phosphoglycerate kinase activity
AVR83_RS01760	COG2390	Transcriptional regulator
AVR83_RS01765	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
AVR83_RS01775	COG0740	serine-type endopeptidase activity
AVR83_RS01780	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AVR83_RS01790	COG1481	regulation of sporulation
AVR83_RS01800	COG1660	Displays ATPase and GTPase activities
AVR83_RS01810	COG0165	Argininosuccinate lyase
AVR83_RS01815	COG0137	argininosuccinate synthase activity
AVR83_RS01820	COG1854	S-ribosylhomocysteine lyase activity
AVR83_RS01825	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AVR83_RS01830	COG0556	nucleotide-excision repair
AVR83_RS01840	COG2814	Major facilitator Superfamily
AVR83_RS01850	COG0446	pyridine nucleotide-disulphide oxidoreductase
AVR83_RS01860	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AVR83_RS01870	COG2323	membrane
AVR83_RS01875	COG0492	ferredoxin-NADP+ reductase activity
AVR83_RS01890	COG1215	transferase activity, transferring glycosyl groups
AVR83_RS01910	COG0446	pyridine nucleotide-disulphide oxidoreductase
AVR83_RS01920	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AVR83_RS01925	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AVR83_RS01930	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AVR83_RS01935	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
AVR83_RS01940	COG1950	PFAM Membrane protein of
AVR83_RS01945	COG1983	PspC domain protein
AVR83_RS01950	COG0704	Plays a role in the regulation of phosphate uptake
AVR83_RS01955	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AVR83_RS01960	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AVR83_RS01965	COG0581	inorganic phosphate transmembrane transporter activity
AVR83_RS01970	COG0573	inorganic phosphate transmembrane transporter activity
AVR83_RS01975	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AVR83_RS01980	COG5002	protein histidine kinase activity
AVR83_RS01985	COG0745	RESPONSE REGULATOR receiver
AVR83_RS02000	COG0653	protein targeting
AVR83_RS02015	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
AVR83_RS02020	COG1739	Uncharacterized protein family UPF0029
AVR83_RS02025	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AVR83_RS02030	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AVR83_RS02035	COG0531	amino acid
AVR83_RS02040	COG0459	protein refolding
AVR83_RS02045	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AVR83_RS02055	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
AVR83_RS02060	COG0488	(ABC) transporter
AVR83_RS02065	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AVR83_RS02070	COG0456	acetyltransferase
AVR83_RS02075	COG0456	acetyltransferase
AVR83_RS02080	COG1214	PFAM Peptidase M22, glycoprotease
AVR83_RS02090	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
AVR83_RS02100	COG3639	organic phosphonate transmembrane transporter activity
AVR83_RS02105	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AVR83_RS02110	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
AVR83_RS02115	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AVR83_RS02130	COG4467	Involved in initiation control of chromosome replication
AVR83_RS02135	COG0470	DNA polymerase III
AVR83_RS02140	COG3870	Protein conserved in bacteria
AVR83_RS02145	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AVR83_RS02165	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AVR83_RS02180	COG2813	Specifically methylates the guanine in position
AVR83_RS02185	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AVR83_RS02190	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AVR83_RS02200	COG1611	Belongs to the LOG family
AVR83_RS02475	COG1396	sequence-specific DNA binding
AVR83_RS02510	COG0222	ribosome binding
AVR83_RS02515	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AVR83_RS02520	COG0081	regulation of translation
AVR83_RS02525	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AVR83_RS02535	COG0250	Participates in transcription elongation, termination and antitermination
AVR83_RS02545	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AVR83_RS02560	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AVR83_RS02565	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
AVR83_RS02570	COG0215	cysteine-tRNA ligase activity
AVR83_RS02575	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AVR83_RS02580	COG4956	integral membrane protein (PIN domain superfamily)
AVR83_RS02590	COG0756	dUTP diphosphatase activity
AVR83_RS02600	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AVR83_RS02615	COG0588	phosphoglycerate mutase activity
AVR83_RS02620	COG0697	spore germination
AVR83_RS02630	COG1316	TRANSCRIPTIONal
AVR83_RS02635	COG0825	malonyl-CoA metabolic process
AVR83_RS02645	COG0439	Biotin carboxylase
AVR83_RS02655	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AVR83_RS02660	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AVR83_RS02660	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AVR83_RS02665	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AVR83_RS02665	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AVR83_RS02670	COG3933	PFAM sigma-54 factor interaction domain-containing protein
AVR83_RS02670	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AVR83_RS02680	COG3716	PTS system mannose fructose sorbose family IID component
AVR83_RS02685	COG3715	PTS system
AVR83_RS02710	COG3409	Peptidoglycan-binding domain 1 protein
AVR83_RS02725	COG0083	homoserine kinase activity
AVR83_RS02730	COG0460	homoserine dehydrogenase
AVR83_RS02735	COG3091	SprT-like family
AVR83_RS02740	COG2183	response to ionizing radiation
AVR83_RS02755	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
AVR83_RS02760	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AVR83_RS02770	COG2188	Transcriptional regulator
AVR83_RS02780	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AVR83_RS02830	COG3104	oligopeptide transport
AVR83_RS02870	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
AVR83_RS02875	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AVR83_RS02880	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AVR83_RS02895	COG0037	tRNA processing
AVR83_RS02900	COG1098	S1 RNA binding domain
AVR83_RS02910	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
AVR83_RS02915	COG2244	polysaccharide biosynthetic process
AVR83_RS02920	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AVR83_RS02925	COG0193	aminoacyl-tRNA hydrolase activity
AVR83_RS02930	COG0039	L-malate dehydrogenase activity
AVR83_RS02945	COG2267	carboxylic ester hydrolase activity
AVR83_RS02960	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AVR83_RS02965	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AVR83_RS02970	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AVR83_RS02975	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
AVR83_RS02980	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AVR83_RS02985	COG0505	Belongs to the CarA family
AVR83_RS02990	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AVR83_RS03010	COG3158	transport of potassium into the cell
AVR83_RS03015	COG2337	Toxic component of a toxin-antitoxin (TA) module
AVR83_RS03020	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AVR83_RS03025	COG0736	holo-[acyl-carrier-protein] synthase activity
AVR83_RS03035	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AVR83_RS03045	COG0501	Belongs to the peptidase M48B family
AVR83_RS03050	COG1704	LemA family
AVR83_RS03055	COG3764	Sortase (surface protein transpeptidase)
AVR83_RS03065	COG0254	rRNA binding
AVR83_RS03070	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AVR83_RS03075	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AVR83_RS03090	COG1760	l-serine dehydratase
AVR83_RS03095	COG1760	l-serine dehydratase
AVR83_RS03100	COG0814	amino acid
AVR83_RS03105	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AVR83_RS03110	COG0504	CTP synthase activity
AVR83_RS03115	COG3343	RNA polymerase activity
AVR83_RS03125	COG0095	Lipoate-protein ligase
AVR83_RS03130	COG1078	dGTPase activity
AVR83_RS03155	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AVR83_RS03165	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AVR83_RS03170	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AVR83_RS03190	COG1321	iron dependent repressor
AVR83_RS03190	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AVR83_RS03195	COG1121	(ABC) transporter
AVR83_RS03200	COG1073	alpha beta
AVR83_RS03205	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
AVR83_RS03210	COG4466	Protein conserved in bacteria
AVR83_RS03215	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AVR83_RS03220	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
AVR83_RS03225	COG0084	hydrolase, TatD family'
AVR83_RS03230	COG2814	Major facilitator Superfamily
AVR83_RS03235	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AVR83_RS03235	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AVR83_RS03245	COG1801	Protein of unknown function DUF72
AVR83_RS03250	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AVR83_RS03265	COG0248	Ppx GppA phosphatase
AVR83_RS03280	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AVR83_RS03290	COG1940	carbohydrate kinase activity
AVR83_RS03295	COG2723	6-phospho-beta-galactosidase activity
AVR83_RS03300	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AVR83_RS03315	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AVR83_RS03320	COG2188	Transcriptional regulator
AVR83_RS03325	COG0180	Tryptophanyl-tRNA synthetase
AVR83_RS03330	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AVR83_RS03335	COG3973	AAA domain
AVR83_RS03370	COG2274	protein secretion by the type I secretion system
AVR83_RS03395	COG3279	Response regulator of the LytR AlgR family
AVR83_RS03420	COG0463	Glycosyl transferase, family 2
AVR83_RS03460	COG1114	Component of the transport system for branched-chain amino acids
AVR83_RS03465	COG0561	phosphatase activity
AVR83_RS03475	COG0561	phosphatase activity
AVR83_RS03485	COG0110	maltose O-acetyltransferase activity
AVR83_RS03535	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AVR83_RS03545	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AVR83_RS03555	COG1125	glycine betaine transport
AVR83_RS03570	COG0300	oxidoreductase activity
AVR83_RS03600	COG1881	PFAM PEBP family protein
AVR83_RS03605	COG3759	membrane
AVR83_RS03615	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AVR83_RS03635	COG0004	ammonium transporteR
AVR83_RS03640	COG2814	Major facilitator Superfamily
AVR83_RS03655	COG1134	teichoic acid transport
AVR83_RS03660	COG1682	transport, permease protein
AVR83_RS03670	COG0436	Aminotransferase
AVR83_RS03685	COG1268	BioY protein
AVR83_RS03725	COG1454	alcohol dehydrogenase
AVR83_RS03725	COG1012	belongs to the aldehyde dehydrogenase family
AVR83_RS03735	COG1131	(ABC) transporter
AVR83_RS03740	COG1725	Transcriptional regulator
AVR83_RS03770	COG3842	ATPase activity
AVR83_RS03810	COG1252	NADH dehydrogenase
AVR83_RS03815	COG1846	Transcriptional regulator
AVR83_RS03825	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AVR83_RS03855	COG3942	CHAP domain
AVR83_RS03855	COG1388	LysM domain
AVR83_RS03860	COG0741	lytic transglycosylase activity
AVR83_RS03875	COG1136	(ABC) transporter
AVR83_RS03880	COG0577	efflux transmembrane transporter activity
AVR83_RS03890	COG2818	Glycosylase
AVR83_RS03895	COG2409	Drug exporters of the RND superfamily
AVR83_RS03895	COG1033	growth of symbiont in host cell
AVR83_RS03905	COG2357	RelA SpoT domain protein
AVR83_RS03915	COG0277	FAD linked oxidase domain protein
AVR83_RS03920	COG1316	TRANSCRIPTIONal
AVR83_RS03935	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AVR83_RS03940	COG1737	Transcriptional regulator
AVR83_RS03950	COG0745	RESPONSE REGULATOR receiver
AVR83_RS03955	COG5002	protein histidine kinase activity
AVR83_RS03965	COG2814	Major facilitator Superfamily
AVR83_RS03985	COG1914	H( )-stimulated, divalent metal cation uptake system
AVR83_RS03990	COG1309	transcriptional regulator
AVR83_RS03995	COG1959	2 iron, 2 sulfur cluster binding
AVR83_RS04005	COG0163	prenyltransferase activity
AVR83_RS04015	COG1263	PTS System
AVR83_RS04015	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AVR83_RS04015	COG2190	(PTS) system
AVR83_RS04020	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AVR83_RS04020	COG2190	(PTS) system
AVR83_RS04020	COG1263	PTS System
AVR83_RS04025	COG0366	Alpha amylase catalytic
AVR83_RS04030	COG2188	Transcriptional regulator
AVR83_RS04055	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AVR83_RS04060	COG0626	cystathionine gamma-synthase activity
AVR83_RS04065	COG1045	serine acetyltransferase
AVR83_RS04085	COG3964	amidohydrolase
AVR83_RS04100	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AVR83_RS04105	COG2188	Transcriptional regulator
AVR83_RS04110	COG0431	NADPH-dependent FMN reductase
AVR83_RS04145	COG3118	belongs to the thioredoxin family
AVR83_RS04155	COG0246	Mannitol dehydrogenase
AVR83_RS04160	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AVR83_RS04170	COG2213	PTS system mannitol-specific
AVR83_RS04180	COG0363	glucosamine-6-phosphate deaminase activity
AVR83_RS04195	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AVR83_RS04205	COG0386	Belongs to the glutathione peroxidase family
AVR83_RS04215	COG4172	Belongs to the ABC transporter superfamily
AVR83_RS04225	COG0488	(ABC) transporter
AVR83_RS04230	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AVR83_RS04235	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AVR83_RS04265	COG0667	Aldo Keto reductase
AVR83_RS04270	COG0406	alpha-ribazole phosphatase activity
AVR83_RS04275	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
AVR83_RS04280	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AVR83_RS04290	COG4166	transmembrane transport
AVR83_RS04320	COG1757	Na H antiporter
AVR83_RS04370	COG3842	ATPase activity
AVR83_RS04375	COG0366	Alpha amylase catalytic
AVR83_RS04385	COG3833	ABC-type maltose transport systems, permease component
AVR83_RS04390	COG1175	transmembrane transport
AVR83_RS04395	COG2182	Extracellular solute-binding protein
AVR83_RS04400	COG0366	Alpha amylase catalytic
AVR83_RS04405	COG1609	Transcriptional regulator
AVR83_RS04410	COG1609	Transcriptional regulator
AVR83_RS04415	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AVR83_RS04420	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
AVR83_RS04425	COG1461	Dihydroxyacetone kinase
AVR83_RS04430	COG2376	Dihydroxyacetone kinase
AVR83_RS04435	COG2376	Dihydroxyacetone kinase
AVR83_RS04440	COG1309	transcriptional regulator
AVR83_RS04445	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
AVR83_RS04450	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
AVR83_RS04465	COG1131	(ABC) transporter
AVR83_RS04470	COG1028	Short-chain dehydrogenase reductase Sdr
AVR83_RS04495	COG2188	Transcriptional regulator
AVR83_RS04500	COG4720	Psort location CytoplasmicMembrane, score
AVR83_RS04505	COG1122	ATPase activity
AVR83_RS04510	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AVR83_RS04540	COG0667	Aldo Keto reductase
AVR83_RS04545	COG0656	L-ascorbic acid biosynthetic process
AVR83_RS04550	COG2807	transmembrane transport
AVR83_RS04590	COG1983	PspC domain protein
AVR83_RS04600	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
AVR83_RS04605	COG2267	carboxylic ester hydrolase activity
AVR83_RS04615	COG1113	amino acid transport
AVR83_RS04630	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AVR83_RS04640	COG0352	thiamine-phosphate diphosphorylase activity
AVR83_RS04645	COG0351	phosphomethylpyrimidine kinase
AVR83_RS04650	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
AVR83_RS04660	COG1606	tRNA processing
AVR83_RS04665	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AVR83_RS04670	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
AVR83_RS04675	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
AVR83_RS04680	COG1691	(AIR) carboxylase
AVR83_RS04685	COG3875	lactate racemase activity
AVR83_RS04690	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AVR83_RS04695	COG0310	cobalt ion transport
AVR83_RS04700	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AVR83_RS04705	COG1122	ATPase activity
AVR83_RS04730	COG4166	transmembrane transport
AVR83_RS04740	COG3022	response to hydroperoxide
AVR83_RS04745	COG2267	carboxylic ester hydrolase activity
AVR83_RS04760	COG0604	alcohol dehydrogenase
AVR83_RS04795	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AVR83_RS04815	COG2368	4-hydroxyphenylacetate
AVR83_RS04820	COG2365	Tyrosine phosphatase family
AVR83_RS04830	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
AVR83_RS04835	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AVR83_RS04840	COG2508	Transcriptional regulator
AVR83_RS04845	COG0778	Nitroreductase
AVR83_RS04855	COG1028	Short-chain dehydrogenase reductase Sdr
AVR83_RS04860	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AVR83_RS04875	COG0471	metal ion transport
AVR83_RS04880	COG1053	succinate dehydrogenase
AVR83_RS04880	COG0431	NADPH-dependent FMN reductase
AVR83_RS04880	COG3976	FMN-binding domain protein
AVR83_RS04900	COG1573	uracil-dna glycosylase
AVR83_RS04905	COG1012	belongs to the aldehyde dehydrogenase family
AVR83_RS04915	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AVR83_RS04920	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AVR83_RS04925	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
AVR83_RS04930	COG4853	Protein conserved in bacteria
AVR83_RS04940	COG5002	protein histidine kinase activity
AVR83_RS04945	COG0745	RESPONSE REGULATOR receiver
AVR83_RS04955	COG2226	methyltransferase
AVR83_RS04980	COG4695	Portal protein
AVR83_RS05040	COG1396	sequence-specific DNA binding
AVR83_RS05055	COG1278	Cold shock
AVR83_RS05065	COG1554	hydrolase, family 65, central catalytic
AVR83_RS05070	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AVR83_RS05080	COG0366	Alpha amylase catalytic
AVR83_RS05080	COG3103	Sh3 type 3 domain protein
AVR83_RS05085	COG0058	SHG alpha-glucan phosphorylase activity
AVR83_RS05090	COG0297	glycogen (starch) synthase activity
AVR83_RS05095	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AVR83_RS05100	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AVR83_RS05105	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AVR83_RS05115	COG4166	transmembrane transport
AVR83_RS05120	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AVR83_RS05125	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AVR83_RS05130	COG2814	Major facilitator Superfamily
AVR83_RS05135	COG0305	Participates in initiation and elongation during chromosome replication
AVR83_RS05140	COG0359	binds to the 23S rRNA
AVR83_RS05150	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AVR83_RS05155	COG0629	single-stranded DNA binding
AVR83_RS05160	COG0360	Binds together with S18 to 16S ribosomal RNA
AVR83_RS05170	COG0187	DNA topoisomerase II activity
AVR83_RS05175	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AVR83_RS05180	COG2501	S4 domain
AVR83_RS05185	COG0592	DNA-directed DNA polymerase activity
AVR83_RS05190	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AVR83_RS05195	COG0594	ribonuclease P activity
AVR83_RS05200	COG0706	membrane insertase activity
AVR83_RS05205	COG4166	transmembrane transport
AVR83_RS05215	COG1847	R3H domain protein
AVR83_RS05220	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
AVR83_RS05225	COG0445	tRNA wobble uridine modification
AVR83_RS05265	COG1307	EDD domain protein, DegV family
AVR83_RS05280	COG3479	Phenolic acid decarboxylase
AVR83_RS05285	COG1695	Transcriptional regulator
AVR83_RS05295	COG1454	alcohol dehydrogenase
AVR83_RS05295	COG1012	belongs to the aldehyde dehydrogenase family
AVR83_RS05300	COG1609	Transcriptional regulator
AVR83_RS05310	COG1869	D-ribose catabolic process
AVR83_RS05315	COG4975	Glucose uptake
AVR83_RS05335	COG3730	PTS system glucitol sorbitol-specific
AVR83_RS05340	COG3732	PTS system glucitol sorbitol-specific
AVR83_RS05355	COG2188	Transcriptional regulator
AVR83_RS05360	COG1132	(ABC) transporter
AVR83_RS05365	COG1132	(ABC) transporter
AVR83_RS05370	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AVR83_RS05370	COG2207	Transcriptional regulator
AVR83_RS05385	COG0395	ABC-type sugar transport system, permease component
AVR83_RS05390	COG1653	transport
AVR83_RS05395	COG0366	Alpha amylase catalytic
AVR83_RS05405	COG2972	Histidine kinase
AVR83_RS05410	COG4753	response regulator
AVR83_RS05410	COG2207	Transcriptional regulator
AVR83_RS05420	COG3842	ATPase activity
AVR83_RS05430	COG2188	Transcriptional regulator
AVR83_RS05440	COG0383	alpha-mannosidase activity
AVR83_RS05445	COG1940	carbohydrate kinase activity
AVR83_RS05450	COG2723	6-phospho-beta-galactosidase activity
AVR83_RS05480	COG1609	Transcriptional regulator
AVR83_RS05480	COG2207	Transcriptional regulator
AVR83_RS05550	COG1349	DNA-binding transcription factor activity
AVR83_RS05555	COG2207	Transcriptional regulator
AVR83_RS05560	COG2814	Major facilitator Superfamily
AVR83_RS05565	COG1070	Carbohydrate kinase
AVR83_RS05570	COG3254	rhamnose metabolic process
AVR83_RS05575	COG4806	L-rhamnose isomerase
AVR83_RS05580	COG0235	Class ii aldolase
AVR83_RS05595	COG0028	Belongs to the TPP enzyme family
AVR83_RS05600	COG1959	2 iron, 2 sulfur cluster binding
AVR83_RS05605	COG0028	Belongs to the TPP enzyme family
AVR83_RS05610	COG1304	FMN binding
AVR83_RS05625	COG4512	PFAM Accessory gene regulator B
AVR83_RS05645	COG1393	Belongs to the ArsC family
AVR83_RS05655	COG2261	transglycosylase associated protein
AVR83_RS05675	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
AVR83_RS05680	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AVR83_RS05700	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AVR83_RS05720	COG1737	Transcriptional regulator
AVR83_RS05725	COG1609	Transcriptional regulator
AVR83_RS05745	COG2160	L-arabinose isomerase activity
AVR83_RS05750	COG0110	maltose O-acetyltransferase activity
AVR83_RS05760	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
AVR83_RS05765	COG1349	DNA-binding transcription factor activity
AVR83_RS05775	COG3414	Phosphotransferase system galactitol-specific IIB component
AVR83_RS05780	COG3775	system Galactitol-specific IIC component
AVR83_RS05795	COG3711	transcriptional antiterminator
AVR83_RS05815	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AVR83_RS05830	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
AVR83_RS05845	COG2211	Major facilitator Superfamily
AVR83_RS05865	COG2190	(PTS) system
AVR83_RS05865	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AVR83_RS05865	COG1263	PTS System
AVR83_RS05870	COG2723	6-phospho-beta-galactosidase activity
AVR83_RS05875	COG2723	6-phospho-beta-galactosidase activity
AVR83_RS05880	COG3711	transcriptional antiterminator
AVR83_RS05890	COG2723	6-phospho-beta-galactosidase activity
AVR83_RS05900	COG2971	BadF BadG BcrA BcrD
AVR83_RS05905	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
AVR83_RS05910	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AVR83_RS05915	COG2188	Transcriptional regulator
AVR83_RS05920	COG2267	carboxylic ester hydrolase activity
AVR83_RS05930	COG2271	Major facilitator Superfamily
AVR83_RS05945	COG1028	Short-chain dehydrogenase reductase Sdr
AVR83_RS05960	COG2271	Major facilitator Superfamily
AVR83_RS05965	COG0583	DNA-binding transcription factor activity
AVR83_RS05970	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AVR83_RS05975	COG0710	3-dehydroquinate dehydratase activity
AVR83_RS05995	COG0667	Aldo Keto reductase
AVR83_RS06000	COG1609	Transcriptional regulator
AVR83_RS06005	COG2017	converts alpha-aldose to the beta-anomer
AVR83_RS06010	COG2211	Major facilitator Superfamily
AVR83_RS06010	COG2190	(PTS) system
AVR83_RS06030	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AVR83_RS06035	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AVR83_RS06040	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
AVR83_RS06045	COG1609	Transcriptional regulator
AVR83_RS06050	COG2944	sequence-specific DNA binding
AVR83_RS06055	COG2184	nucleotidyltransferase activity
AVR83_RS06075	COG0477	Major facilitator Superfamily
AVR83_RS06085	COG1609	Transcriptional regulator
AVR83_RS06090	COG1874	Beta-galactosidase
AVR83_RS06100	COG1114	Component of the transport system for branched-chain amino acids
AVR83_RS06110	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AVR83_RS06160	COG0446	pyridine nucleotide-disulphide oxidoreductase
AVR83_RS06175	COG3590	peptidase
AVR83_RS06180	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AVR83_RS06200	COG1937	Protein conserved in bacteria
AVR83_RS06205	COG3118	belongs to the thioredoxin family
AVR83_RS06210	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AVR83_RS06215	COG2217	Heavy metal translocating P-type atpase
AVR83_RS06230	COG2226	methyltransferase
AVR83_RS06280	COG0076	glutamate decarboxylase activity
AVR83_RS06305	COG2207	Transcriptional regulator
AVR83_RS06340	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
AVR83_RS06345	COG1968	undecaprenyl-diphosphatase activity
AVR83_RS06365	COG0656	L-ascorbic acid biosynthetic process
AVR83_RS06375	COG0737	Belongs to the 5'-nucleotidase family
AVR83_RS06425	COG0477	Major facilitator Superfamily
AVR83_RS06450	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
AVR83_RS06465	COG0697	spore germination
AVR83_RS06485	COG0071	Belongs to the small heat shock protein (HSP20) family
AVR83_RS06500	COG1194	a g-specific adenine glycosylase
AVR83_RS06510	COG3189	MarR family transcriptional regulator
AVR83_RS06515	COG1393	Belongs to the ArsC family
AVR83_RS06530	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AVR83_RS06540	COG1113	amino acid transport
AVR83_RS06545	COG1757	Na H antiporter
AVR83_RS06560	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AVR83_RS06565	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
AVR83_RS06575	COG2315	Protein conserved in bacteria
AVR83_RS06585	COG2217	Heavy metal translocating P-type atpase
AVR83_RS06615	COG4989	oxidoreductase activity
AVR83_RS06620	COG2151	metal-sulfur cluster biosynthetic enzyme
AVR83_RS06630	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AVR83_RS06635	COG1882	Formate acetyltransferase
AVR83_RS06640	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AVR83_RS06670	COG2814	Major facilitator Superfamily
AVR83_RS06675	COG0803	Belongs to the bacterial solute-binding protein 9 family
AVR83_RS06690	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AVR83_RS06695	COG0302	gtp cyclohydrolase
AVR83_RS06705	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AVR83_RS06735	COG0640	Transcriptional regulator
AVR83_RS06740	COG1272	protein, Hemolysin III
AVR83_RS06755	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AVR83_RS06760	COG0628	permease
AVR83_RS06775	COG3158	transport of potassium into the cell
AVR83_RS06780	COG0531	amino acid
AVR83_RS06790	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AVR83_RS06795	COG2365	Tyrosine phosphatase family
AVR83_RS06800	COG0516	GMP reductase activity
AVR83_RS06805	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AVR83_RS06810	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AVR83_RS06825	COG1929	Belongs to the glycerate kinase type-1 family
AVR83_RS06835	COG1562	ergosterol biosynthetic process
AVR83_RS06840	COG1233	COG1233 Phytoene dehydrogenase and related
AVR83_RS06845	COG2738	Putative neutral zinc metallopeptidase
AVR83_RS06850	COG1307	EDD domain protein, DegV family
AVR83_RS06860	COG1380	Effector of murein hydrolase LrgA
AVR83_RS06885	COG0735	belongs to the Fur family
AVR83_RS06915	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AVR83_RS06915	COG1263	PTS System
AVR83_RS06915	COG2190	(PTS) system
AVR83_RS06930	COG3711	transcriptional antiterminator
AVR83_RS06930	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AVR83_RS06935	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AVR83_RS06935	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AVR83_RS06935	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AVR83_RS06940	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AVR83_RS06945	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AVR83_RS06945	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AVR83_RS06945	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AVR83_RS06950	COG0383	alpha-mannosidase activity
AVR83_RS06960	COG0561	phosphatase activity
AVR83_RS06975	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AVR83_RS06980	COG4619	ABC transporter
AVR83_RS06985	COG0390	transport system, permease component
AVR83_RS07000	COG1609	Transcriptional regulator
AVR83_RS07005	COG0366	Alpha amylase catalytic
AVR83_RS07010	COG2190	(PTS) system
AVR83_RS07010	COG1263	PTS System
AVR83_RS07010	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AVR83_RS07035	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AVR83_RS07040	COG1126	abc transporter atp-binding protein
AVR83_RS07045	COG0765	amino acid transport
AVR83_RS07050	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AVR83_RS07055	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AVR83_RS07060	COG0583	DNA-binding transcription factor activity
AVR83_RS07075	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AVR83_RS07080	COG0357	Ribosomal RNA small subunit methyltransferase G
AVR83_RS07090	COG1192	Involved in chromosome partitioning
AVR83_RS07095	COG1475	DNA binding
AVR83_RS07100	COG4481	Protein conserved in bacteria
AVR83_RS07105	COG0012	GTP binding
AVR83_RS07120	COG0516	GMP reductase activity
AVR83_RS07120	COG0517	IMP dehydrogenase activity
AVR83_RS07125	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AVR83_RS07145	COG1686	Belongs to the peptidase S11 family
AVR83_RS07150	COG1247	-acetyltransferase
AVR83_RS07190	COG2815	serine threonine protein kinase
AVR83_RS07190	COG0515	serine threonine protein kinase
AVR83_RS07200	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AVR83_RS07210	COG1940	carbohydrate kinase activity
AVR83_RS07210	COG1846	Transcriptional regulator
AVR83_RS07215	COG0628	permease
AVR83_RS07220	COG0588	phosphoglycerate mutase activity
AVR83_RS07250	COG0477	Major facilitator Superfamily
AVR83_RS07265	COG0656	L-ascorbic acid biosynthetic process
AVR83_RS07270	COG1376	ErfK ybiS ycfS ynhG family protein
AVR83_RS07280	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
AVR83_RS07290	COG1136	(ABC) transporter
AVR83_RS07290	COG0577	efflux transmembrane transporter activity
AVR83_RS07305	COG0693	protein deglycase activity
AVR83_RS07325	COG0789	Transcriptional regulator
AVR83_RS07345	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AVR83_RS07350	COG2723	6-phospho-beta-galactosidase activity
AVR83_RS07360	COG0783	Belongs to the Dps family
AVR83_RS07370	COG1053	succinate dehydrogenase
AVR83_RS07380	COG2816	NAD+ diphosphatase activity
AVR83_RS07390	COG0481	GTPase activity
AVR83_RS07425	COG1028	Short-chain dehydrogenase reductase Sdr
AVR83_RS07430	COG0110	maltose O-acetyltransferase activity
AVR83_RS07435	COG4221	oxidoreductase activity
AVR83_RS07445	COG1309	transcriptional regulator
AVR83_RS07450	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AVR83_RS07455	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AVR83_RS07460	COG1120	ATPase activity
AVR83_RS07465	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AVR83_RS07475	COG0477	Major facilitator Superfamily
AVR83_RS07480	COG4989	oxidoreductase activity
AVR83_RS07500	COG0300	oxidoreductase activity
AVR83_RS07505	COG1733	regulation of RNA biosynthetic process
AVR83_RS07520	COG1012	belongs to the aldehyde dehydrogenase family
AVR83_RS07530	COG1309	transcriptional regulator
AVR83_RS07545	COG3279	Response regulator of the LytR AlgR family
AVR83_RS07550	COG0367	asparagine synthase
AVR83_RS07560	COG2814	Major facilitator Superfamily
AVR83_RS07565	COG1733	regulation of RNA biosynthetic process
AVR83_RS07570	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AVR83_RS07610	COG1063	alcohol dehydrogenase
AVR83_RS07665	COG2217	Heavy metal translocating P-type atpase
AVR83_RS07685	COG0531	amino acid
AVR83_RS07700	COG1028	Short-chain dehydrogenase reductase Sdr
AVR83_RS07705	COG1473	amidohydrolase
AVR83_RS07715	COG1132	(ABC) transporter
AVR83_RS07720	COG1132	(ABC) transporter
AVR83_RS07765	COG4221	oxidoreductase activity
AVR83_RS07780	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AVR83_RS07805	COG0803	Belongs to the bacterial solute-binding protein 9 family
AVR83_RS07825	COG0741	lytic transglycosylase activity
AVR83_RS07830	COG0789	Transcriptional regulator
AVR83_RS07840	COG2723	6-phospho-beta-galactosidase activity
AVR83_RS07845	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AVR83_RS07850	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AVR83_RS07885	COG1136	(ABC) transporter
AVR83_RS07885	COG0577	efflux transmembrane transporter activity
AVR83_RS07895	COG0640	Transcriptional regulator
AVR83_RS07915	COG1914	H( )-stimulated, divalent metal cation uptake system
AVR83_RS07925	COG2246	polysaccharide biosynthetic process
AVR83_RS07930	COG5549	protein import
AVR83_RS07930	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AVR83_RS07945	COG0559	Belongs to the binding-protein-dependent transport system permease family
AVR83_RS07960	COG0410	ABC transporter
AVR83_RS07965	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
AVR83_RS07965	COG3620	sequence-specific DNA binding
AVR83_RS07965	COG0617	tRNA 3'-terminal CCA addition
AVR83_RS07995	COG4120	Belongs to the binding-protein-dependent transport system permease family
AVR83_RS08005	COG2190	(PTS) system
AVR83_RS08005	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AVR83_RS08005	COG1263	PTS System
AVR83_RS08010	COG0778	Nitroreductase
AVR83_RS08020	COG1132	(ABC) transporter
AVR83_RS08025	COG1940	carbohydrate kinase activity
AVR83_RS08050	COG0697	spore germination
AVR83_RS08095	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AVR83_RS08105	COG0583	DNA-binding transcription factor activity
AVR83_RS08125	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AVR83_RS08135	COG0242	peptide deformylase activity
AVR83_RS08145	COG1328	CTP reductase activity
AVR83_RS08155	COG2200	EAL domain
AVR83_RS08195	COG2270	Major facilitator Superfamily
AVR83_RS08210	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AVR83_RS08220	COG0561	phosphatase activity
AVR83_RS08225	COG0488	(ABC) transporter
AVR83_RS08250	COG0640	Transcriptional regulator
AVR83_RS08260	COG1511	domain protein
AVR83_RS08260	COG1511	domain protein
AVR83_RS08275	COG2814	Major facilitator Superfamily
AVR83_RS08280	COG1132	(ABC) transporter
AVR83_RS08285	COG1132	(ABC) transporter
AVR83_RS08290	COG0667	Aldo Keto reductase
AVR83_RS08300	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AVR83_RS08315	COG1011	Hydrolase
AVR83_RS08320	COG0110	maltose O-acetyltransferase activity
AVR83_RS08325	COG0589	response to stress
AVR83_RS08345	COG0656	L-ascorbic acid biosynthetic process
AVR83_RS08350	COG4221	oxidoreductase activity
AVR83_RS08370	COG0583	DNA-binding transcription factor activity
AVR83_RS08375	COG0656	L-ascorbic acid biosynthetic process
AVR83_RS08405	COG0656	L-ascorbic acid biosynthetic process
AVR83_RS08410	COG1028	Short-chain dehydrogenase reductase Sdr
AVR83_RS08415	COG1063	alcohol dehydrogenase
AVR83_RS08425	COG0583	DNA-binding transcription factor activity
AVR83_RS08450	COG0456	acetyltransferase
AVR83_RS08470	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AVR83_RS08490	COG0789	Transcriptional regulator
AVR83_RS08505	COG4221	oxidoreductase activity
AVR83_RS08515	COG4152	abc transporter atp-binding protein
AVR83_RS08520	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AVR83_RS08535	COG0438	transferase activity, transferring glycosyl groups
AVR83_RS08545	COG0583	DNA-binding transcription factor activity
AVR83_RS08550	COG2855	membrane
AVR83_RS08555	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AVR83_RS08565	COG2814	Major facilitator Superfamily
AVR83_RS08575	COG2814	Major facilitator Superfamily
AVR83_RS08615	COG1136	(ABC) transporter
AVR83_RS08620	COG0577	efflux transmembrane transporter activity
AVR83_RS08635	COG4978	Transcriptional regulator
AVR83_RS08635	COG0789	Transcriptional regulator
AVR83_RS08640	COG1811	Na channel or pump
AVR83_RS08650	COG4990	cell redox homeostasis
AVR83_RS08665	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AVR83_RS08670	COG4720	Psort location CytoplasmicMembrane, score
AVR83_RS08715	COG0531	amino acid
AVR83_RS08720	COG0710	3-dehydroquinate dehydratase activity
AVR83_RS08740	COG0716	FMN binding
AVR83_RS08765	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AVR83_RS08770	COG0561	phosphatase activity
AVR83_RS08785	COG1216	Glycosyl transferase, family 2
AVR83_RS08790	COG2188	Transcriptional regulator
AVR83_RS08795	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AVR83_RS08800	COG1447	Phosphotransferase system cellobiose-specific component IIA
AVR83_RS08805	COG2723	6-phospho-beta-galactosidase activity
AVR83_RS08810	COG2723	6-phospho-beta-galactosidase activity
AVR83_RS08815	COG3048	D-serine ammonia-lyase activity
AVR83_RS08820	COG1131	(ABC) transporter
AVR83_RS08830	COG1309	transcriptional regulator
AVR83_RS08835	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AVR83_RS08840	COG1827	regulation of RNA biosynthetic process
AVR83_RS08875	COG0494	nUDIX hydrolase
AVR83_RS08880	COG0110	maltose O-acetyltransferase activity
AVR83_RS08890	COG0561	phosphatase activity
AVR83_RS08900	COG0366	Alpha amylase catalytic
AVR83_RS08920	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AVR83_RS08940	COG2246	polysaccharide biosynthetic process
AVR83_RS08950	COG0589	response to stress
AVR83_RS08960	COG1131	(ABC) transporter
AVR83_RS08965	COG1725	Transcriptional regulator
AVR83_RS08980	COG1136	(ABC) transporter
AVR83_RS09000	COG2365	Tyrosine phosphatase family
AVR83_RS09005	COG0095	Lipoate-protein ligase
AVR83_RS09010	COG0431	NADPH-dependent FMN reductase
AVR83_RS09010	COG1053	succinate dehydrogenase
AVR83_RS09010	COG3976	FMN-binding domain protein
AVR83_RS09015	COG3976	FMN-binding domain protein
AVR83_RS09015	COG1053	succinate dehydrogenase
AVR83_RS09015	COG0431	NADPH-dependent FMN reductase
AVR83_RS09025	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AVR83_RS09030	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
AVR83_RS09035	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AVR83_RS09040	COG0047	phosphoribosylformylglycinamidine synthase activity
AVR83_RS09045	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AVR83_RS09055	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
AVR83_RS09060	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AVR83_RS09065	COG0138	bifunctional purine biosynthesis protein purh
AVR83_RS09070	COG0151	Belongs to the GarS family
AVR83_RS09080	COG1215	transferase activity, transferring glycosyl groups
AVR83_RS09100	COG2252	PERMEase
AVR83_RS09105	COG2233	PERMEase
AVR83_RS09110	COG2508	Transcriptional regulator
AVR83_RS09115	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AVR83_RS09120	COG0540	Belongs to the ATCase OTCase family
AVR83_RS09125	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
AVR83_RS09130	COG0505	Belongs to the CarA family
AVR83_RS09135	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AVR83_RS09140	COG0167	dihydroorotate dehydrogenase activity
AVR83_RS09145	COG0284	orotidine-5'-phosphate decarboxylase activity
AVR83_RS09150	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AVR83_RS09160	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
AVR83_RS09165	COG1074	ATP-dependent DNA helicase activity
AVR83_RS09175	COG0702	epimerase
AVR83_RS09180	COG0583	DNA-binding transcription factor activity
AVR83_RS09195	COG0436	Aminotransferase
AVR83_RS09200	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AVR83_RS09205	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AVR83_RS09215	COG0604	alcohol dehydrogenase
AVR83_RS09220	COG0789	Transcriptional regulator
AVR83_RS09225	COG2814	Major facilitator Superfamily
AVR83_RS09230	COG0025	NhaP-type Na H and K H
AVR83_RS09235	COG1780	Probably involved in ribonucleotide reductase function
AVR83_RS09240	COG1253	flavin adenine dinucleotide binding
AVR83_RS09270	COG1418	mRNA catabolic process
AVR83_RS09280	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AVR83_RS09285	COG2188	Transcriptional regulator
AVR83_RS09295	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
AVR83_RS09310	COG1396	sequence-specific DNA binding
AVR83_RS09315	COG0564	pseudouridine synthase activity
AVR83_RS09320	COG0589	response to stress
AVR83_RS09325	COG2188	Transcriptional regulator
AVR83_RS09330	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AVR83_RS09335	COG3715	PTS system
AVR83_RS09340	COG3716	PTS system mannose fructose sorbose family IID component
AVR83_RS09350	COG1705	Flagellar rod assembly protein muramidase FlgJ
AVR83_RS09355	COG0095	Lipoate-protein ligase
AVR83_RS09385	COG0626	cystathionine gamma-synthase activity
AVR83_RS09390	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AVR83_RS09395	COG1073	alpha beta
AVR83_RS09405	COG0028	Belongs to the TPP enzyme family
AVR83_RS09445	COG1725	Transcriptional regulator
AVR83_RS09450	COG1131	(ABC) transporter
AVR83_RS09460	COG1335	isochorismatase
AVR83_RS09465	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AVR83_RS09470	COG0025	NhaP-type Na H and K H
AVR83_RS09475	COG0673	inositol 2-dehydrogenase activity
AVR83_RS09480	COG0673	inositol 2-dehydrogenase activity
AVR83_RS09485	COG1737	Transcriptional regulator
AVR83_RS09490	COG1609	Transcriptional regulator
AVR83_RS09510	COG1882	Formate acetyltransferase
AVR83_RS09515	COG1349	DNA-binding transcription factor activity
AVR83_RS09530	COG4975	Glucose uptake
AVR83_RS09535	COG0328	RNA-DNA hybrid ribonuclease activity
AVR83_RS09545	COG0778	Nitroreductase
AVR83_RS09550	COG2326	polyphosphate kinase activity
AVR83_RS09555	COG4932	domain protein
AVR83_RS09565	COG0492	ferredoxin-NADP+ reductase activity
AVR83_RS09570	COG0584	glycerophosphoryl diester phosphodiesterase
AVR83_RS09575	COG1368	sulfuric ester hydrolase activity
AVR83_RS09595	COG3548	integral membrane protein
AVR83_RS09610	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AVR83_RS09635	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AVR83_RS09640	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
AVR83_RS09645	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
AVR83_RS09650	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AVR83_RS09655	COG0131	Imidazoleglycerol-phosphate dehydratase
AVR83_RS09660	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AVR83_RS09665	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
AVR83_RS09670	COG0107	imidazoleglycerol-phosphate synthase activity
AVR83_RS09675	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AVR83_RS09680	COG0140	phosphoribosyl-ATP diphosphatase activity
AVR83_RS09685	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AVR83_RS09690	COG0110	maltose O-acetyltransferase activity
AVR83_RS09695	COG0861	Integral membrane protein TerC family
AVR83_RS09700	COG2084	Dehydrogenase
AVR83_RS09705	COG0446	pyridine nucleotide-disulphide oxidoreductase
AVR83_RS09715	COG4120	Belongs to the binding-protein-dependent transport system permease family
AVR83_RS09725	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
AVR83_RS09730	COG2873	o-acetylhomoserine
AVR83_RS09740	COG1307	EDD domain protein, DegV family
AVR83_RS09745	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AVR83_RS09750	COG2190	(PTS) system
AVR83_RS09750	COG1263	PTS System
AVR83_RS09750	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AVR83_RS09775	COG0488	(ABC) transporter
AVR83_RS09795	COG1522	sequence-specific DNA binding
AVR83_RS09800	COG0791	NLP P60 protein
AVR83_RS09815	COG0477	Major facilitator Superfamily
AVR83_RS09840	COG3830	Belongs to the UPF0237 family
AVR83_RS09845	COG2848	UPF0210 protein
AVR83_RS09850	COG0745	RESPONSE REGULATOR receiver
AVR83_RS09855	COG5002	protein histidine kinase activity
AVR83_RS09855	COG3850	Histidine kinase
AVR83_RS09860	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
AVR83_RS09865	COG4975	Glucose uptake
AVR83_RS09870	COG0166	Belongs to the GPI family
AVR83_RS09905	COG1396	sequence-specific DNA binding
AVR83_RS10030	COG1783	phage Terminase large subunit
AVR83_RS10160	COG0577	efflux transmembrane transporter activity
AVR83_RS10160	COG1136	(ABC) transporter
AVR83_RS10170	COG1132	(ABC) transporter
AVR83_RS10175	COG4886	Leucine-rich repeat (LRR) protein
AVR83_RS10175	COG4932	domain protein
AVR83_RS10240	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AVR83_RS10250	COG1970	mechanosensitive ion channel activity
AVR83_RS10670	COG3728	DNA packaging
AVR83_RS10670	COG5484	DNA packaging
AVR83_RS10685	COG2868	ribosomal protein
AVR83_RS10815	COG0726	polysaccharide deacetylase
AVR83_RS10830	COG1132	(ABC) transporter
AVR83_RS10850	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AVR83_RS10860	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AVR83_RS10865	COG1482	cell wall glycoprotein biosynthetic process
AVR83_RS10870	COG3442	glutamine amidotransferase
AVR83_RS10875	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AVR83_RS10880	COG1435	thymidine kinase activity
AVR83_RS10885	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AVR83_RS10890	COG2890	protein-(glutamine-N5) methyltransferase activity
AVR83_RS10895	COG0009	L-threonylcarbamoyladenylate synthase
AVR83_RS10900	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AVR83_RS10905	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AVR83_RS10915	COG2233	PERMEase
AVR83_RS10920	COG0356	it plays a direct role in the translocation of protons across the membrane
AVR83_RS10925	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AVR83_RS10930	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AVR83_RS10935	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AVR83_RS10940	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AVR83_RS10945	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AVR83_RS10950	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AVR83_RS10955	COG0355	proton-transporting ATP synthase activity, rotational mechanism
AVR83_RS10960	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AVR83_RS10970	COG1077	Cell shape determining protein MreB Mrl
AVR83_RS10975	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AVR83_RS10985	COG0772	Belongs to the SEDS family
AVR83_RS10990	COG0509	glycine decarboxylation via glycine cleavage system
AVR83_RS10995	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AVR83_RS11000	COG2011	ABC-type metal ion transport system permease component
AVR83_RS11005	COG1464	Belongs to the NlpA lipoprotein family
AVR83_RS11025	COG1181	Belongs to the D-alanine--D-alanine ligase family
AVR83_RS11045	COG0589	response to stress
AVR83_RS11060	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AVR83_RS11065	COG0189	ligase activity
AVR83_RS11065	COG2918	glutathione biosynthetic process
AVR83_RS11070	COG1609	Transcriptional regulator
AVR83_RS11075	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AVR83_RS11080	COG3715	PTS system
AVR83_RS11085	COG3716	PTS system mannose fructose sorbose family IID component
AVR83_RS11095	COG0366	Alpha amylase catalytic
AVR83_RS11100	COG0640	Transcriptional regulator
AVR83_RS11115	COG4493	Belongs to the UPF0637 family
AVR83_RS11120	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AVR83_RS11125	COG1956	GAF domain-containing protein
AVR83_RS11130	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
AVR83_RS11140	COG1104	cysteine desulfurase activity
AVR83_RS11145	COG0301	tRNA thio-modification
AVR83_RS11155	COG1181	Belongs to the D-alanine--D-alanine ligase family
AVR83_RS11155	COG2918	glutathione biosynthetic process
AVR83_RS11165	COG0525	valine-tRNA ligase activity
AVR83_RS11170	COG0285	dihydrofolate synthase activity
AVR83_RS11175	COG2003	Belongs to the UPF0758 family
AVR83_RS11180	COG1077	Cell shape determining protein MreB Mrl
AVR83_RS11185	COG1792	Involved in formation and maintenance of cell shape
AVR83_RS11195	COG0850	regulation of cytokinetic process
AVR83_RS11200	COG2894	cell division
AVR83_RS11205	COG0765	amino acid transport
AVR83_RS11210	COG1126	abc transporter atp-binding protein
AVR83_RS11215	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AVR83_RS11220	COG0527	aspartate kinase activity
AVR83_RS11225	COG0612	Peptidase, M16
AVR83_RS11230	COG0612	Peptidase, M16
AVR83_RS11235	COG1426	Protein conserved in bacteria
AVR83_RS11240	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AVR83_RS11245	COG1546	Belongs to the CinA family
AVR83_RS11245	COG1058	Belongs to the CinA family
AVR83_RS11250	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AVR83_RS11255	COG1418	mRNA catabolic process
AVR83_RS11260	COG1692	metallophosphoesterase
AVR83_RS11265	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AVR83_RS11270	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AVR83_RS11295	COG0632	four-way junction helicase activity
AVR83_RS11300	COG2255	four-way junction helicase activity
AVR83_RS11305	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
AVR83_RS11310	COG0343	queuine tRNA-ribosyltransferase activity
AVR83_RS11315	COG1862	Preprotein translocase
AVR83_RS11320	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AVR83_RS11325	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
AVR83_RS11330	COG0513	Belongs to the DEAD box helicase family
AVR83_RS11335	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AVR83_RS11340	COG4472	Bacterial protein of unknown function (DUF965)
AVR83_RS11345	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AVR83_RS11350	COG3906	Belongs to the UPF0473 family
AVR83_RS11360	COG1193	negative regulation of DNA recombination
AVR83_RS11365	COG3118	belongs to the thioredoxin family
AVR83_RS11370	COG1719	4-vinyl reductase, 4VR
AVR83_RS11375	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AVR83_RS11380	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AVR83_RS11390	COG0517	IMP dehydrogenase activity
AVR83_RS11395	COG2171	N-acyltransferase activity
AVR83_RS11400	COG1473	amidohydrolase
AVR83_RS11405	COG0668	transmembrane transport
AVR83_RS11420	COG0789	Transcriptional regulator
AVR83_RS11425	COG0006	proline dipeptidase activity
AVR83_RS11430	COG1609	Transcriptional regulator
AVR83_RS11445	COG0217	transcriptional regulatory protein
AVR83_RS11455	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AVR83_RS11485	COG0827	DNA restriction-modification system
AVR83_RS11490	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AVR83_RS11495	COG1113	amino acid transport
AVR83_RS11505	COG0737	Belongs to the 5'-nucleotidase family
AVR83_RS11510	COG4470	Protein conserved in bacteria
AVR83_RS11515	COG0647	UMP catabolic process
AVR83_RS11525	COG0586	Pfam SNARE associated Golgi protein
AVR83_RS11535	COG1098	S1 RNA binding domain
AVR83_RS11680	COG1234	tRNA 3'-trailer cleavage
AVR83_RS11685	COG1393	Belongs to the ArsC family
AVR83_RS11690	COG4862	establishment of competence for transformation
AVR83_RS11700	COG1164	Oligoendopeptidase f
AVR83_RS11710	COG2357	RelA SpoT domain protein
AVR83_RS11715	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AVR83_RS11720	COG0564	pseudouridine synthase activity
AVR83_RS11725	COG3142	Participates in the control of copper homeostasis
AVR83_RS11730	COG2706	6-phosphogluconolactonase activity
AVR83_RS11740	COG0628	permease
AVR83_RS11745	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AVR83_RS11755	COG1114	Component of the transport system for branched-chain amino acids
AVR83_RS11765	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AVR83_RS11770	COG1674	ftsk spoiiie
AVR83_RS11785	COG2001	Belongs to the MraZ family
AVR83_RS11790	COG0275	rRNA processing
AVR83_RS11800	COG0768	penicillin binding
AVR83_RS11805	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AVR83_RS11810	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AVR83_RS11815	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AVR83_RS11820	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AVR83_RS11835	COG1799	cell septum assembly
AVR83_RS11840	COG0762	integral membrane protein
AVR83_RS11850	COG3599	regulation of cell shape
AVR83_RS11855	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AVR83_RS11870	COG3279	Response regulator of the LytR AlgR family
AVR83_RS11880	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AVR83_RS11885	COG0494	nUDIX hydrolase
AVR83_RS11895	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AVR83_RS11900	COG1104	cysteine desulfurase activity
AVR83_RS11910	COG0482	sulfurtransferase activity
AVR83_RS11915	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AVR83_RS11920	COG0569	domain protein
AVR83_RS11950	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AVR83_RS11955	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AVR83_RS11960	COG3584	3D domain protein
AVR83_RS11960	COG1388	LysM domain
AVR83_RS11970	COG1597	lipid kinase activity
AVR83_RS11975	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AVR83_RS11980	COG5503	Protein of unknown function (DUF1447)
AVR83_RS11990	COG0242	peptide deformylase activity
AVR83_RS12015	COG0039	L-malate dehydrogenase activity
AVR83_RS12020	COG4476	Belongs to the UPF0223 family
AVR83_RS12025	COG0483	inositol monophosphate 1-phosphatase activity
AVR83_RS12030	COG1217	gtp-binding protein TYPA
AVR83_RS12055	COG0772	Belongs to the SEDS family
AVR83_RS12060	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
AVR83_RS12065	COG4471	UPF0298 protein
AVR83_RS12070	COG0742	ribosomal rna small subunit methyltransferase
AVR83_RS12075	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AVR83_RS12080	COG3480	Lon protease (S16) C-terminal proteolytic domain
AVR83_RS12085	COG1596	polysaccharide export
AVR83_RS12085	COG1555	photosystem II stabilization
AVR83_RS12090	COG2131	deaminase
AVR83_RS12095	COG2333	competence protein COMEC
AVR83_RS12095	COG0658	competence protein
AVR83_RS12100	COG1466	dna polymerase III delta subunit
AVR83_RS12105	COG0268	Binds directly to 16S ribosomal RNA
AVR83_RS12110	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AVR83_RS12135	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AVR83_RS12140	COG0544	peptidyl-prolyl cis-trans isomerase activity
AVR83_RS12145	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AVR83_RS12150	COG0218	Necessary for normal cell division and for the maintenance of normal septation
AVR83_RS12165	COG0765	amino acid transport
AVR83_RS12170	COG1126	abc transporter atp-binding protein
AVR83_RS12175	COG0322	excinuclease ABC activity
AVR83_RS12185	COG0489	protein tyrosine kinase activity
AVR83_RS12195	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AVR83_RS12200	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AVR83_RS12205	COG0438	transferase activity, transferring glycosyl groups
AVR83_RS12235	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AVR83_RS12235	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AVR83_RS12235	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AVR83_RS12240	COG1105	Belongs to the carbohydrate kinase PfkB family
AVR83_RS12245	COG1349	DNA-binding transcription factor activity
AVR83_RS12250	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AVR83_RS12260	COG1234	tRNA 3'-trailer cleavage
AVR83_RS12265	COG0300	oxidoreductase activity
AVR83_RS12270	COG5416	Lipopolysaccharide assembly protein A domain
AVR83_RS12275	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
AVR83_RS12275	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AVR83_RS12280	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AVR83_RS12295	COG0393	Putative heavy-metal-binding
AVR83_RS12325	COG0772	Belongs to the SEDS family
AVR83_RS12335	COG1116	anion transmembrane transporter activity
AVR83_RS12350	COG0463	Glycosyl transferase, family 2
AVR83_RS12365	COG3425	synthase
AVR83_RS12375	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AVR83_RS12380	COG4224	UPF0291 protein
AVR83_RS12385	COG3763	UPF0154 protein
AVR83_RS12390	COG0204	Acyl-transferase
AVR83_RS12395	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
AVR83_RS12400	COG2827	Endonuclease containing a URI domain
AVR83_RS12405	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AVR83_RS12415	COG0052	Belongs to the universal ribosomal protein uS2 family
AVR83_RS12420	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AVR83_RS12425	COG0528	UMP kinase activity
AVR83_RS12430	COG0233	cytoplasmic translational termination
AVR83_RS12435	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AVR83_RS12440	COG4589	Belongs to the CDS family
AVR83_RS12445	COG0750	zinc metalloprotease
AVR83_RS12450	COG0442	prolyl-tRNA aminoacylation
AVR83_RS12455	COG2176	DNA-directed DNA polymerase activity
AVR83_RS12460	COG0779	Required for maturation of 30S ribosomal subunits
AVR83_RS12465	COG0195	Participates in both transcription termination and antitermination
AVR83_RS12470	COG2740	Nucleic-acid-binding protein implicated in transcription termination
AVR83_RS12480	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AVR83_RS12485	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AVR83_RS12490	COG0738	Major facilitator superfamily
AVR83_RS12495	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
AVR83_RS12505	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AVR83_RS12510	COG0287	Prephenate dehydrogenase
AVR83_RS12515	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AVR83_RS12520	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AVR83_RS12525	COG0196	riboflavin kinase activity
AVR83_RS12530	COG3527	Alpha-acetolactate decarboxylase
AVR83_RS12535	COG1420	regulation of RNA biosynthetic process
AVR83_RS12540	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AVR83_RS12545	COG0443	Heat shock 70 kDa protein
AVR83_RS12550	COG0484	heat shock protein binding
AVR83_RS12555	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AVR83_RS12565	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AVR83_RS12570	COG1696	Membrane protein involved in D-alanine export
AVR83_RS12575	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AVR83_RS12580	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
AVR83_RS12585	COG0481	GTPase activity
AVR83_RS12600	COG2094	Belongs to the DNA glycosylase MPG family
AVR83_RS12605	COG2264	protein methyltransferase activity
AVR83_RS12610	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AVR83_RS12620	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AVR83_RS12625	COG1490	D-aminoacyl-tRNA deacylase activity
AVR83_RS12630	COG0546	phosphoglycolate phosphatase activity
AVR83_RS12635	COG3001	Fructosamine kinase
AVR83_RS12640	COG3103	Sh3 type 3 domain protein
AVR83_RS12640	COG4991	sh3 domain protein
AVR83_RS12640	COG0860	N-Acetylmuramoyl-L-alanine amidase
AVR83_RS12645	COG0124	histidyl-tRNA synthetase
AVR83_RS12650	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AVR83_RS12660	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AVR83_RS12670	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
AVR83_RS12680	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
AVR83_RS12685	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AVR83_RS12690	COG1610	YqeY-like protein
AVR83_RS12695	COG1702	phosphate starvation-inducible protein PhoH
AVR83_RS12700	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AVR83_RS12705	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AVR83_RS12710	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AVR83_RS12715	COG1381	Involved in DNA repair and RecF pathway recombination
AVR83_RS12720	COG0752	glycyl-tRNA synthetase alpha subunit
AVR83_RS12725	COG0751	glycine-tRNA ligase activity
AVR83_RS12730	COG0358	DNA primase activity
AVR83_RS12735	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AVR83_RS12740	COG1725	Transcriptional regulator
AVR83_RS12745	COG1131	(ABC) transporter
AVR83_RS12765	COG1131	(ABC) transporter
AVR83_RS12780	COG0519	Catalyzes the synthesis of GMP from XMP
AVR83_RS12785	COG1131	(ABC) transporter
AVR83_RS12795	COG4585	Histidine kinase
AVR83_RS12800	COG2197	response regulator
AVR83_RS12805	COG0446	pyridine nucleotide-disulphide oxidoreductase
AVR83_RS12815	COG0604	alcohol dehydrogenase
AVR83_RS12820	COG0583	DNA-binding transcription factor activity
AVR83_RS12850	COG0546	phosphoglycolate phosphatase activity
AVR83_RS12870	COG1393	Belongs to the ArsC family
AVR83_RS12880	COG1349	DNA-binding transcription factor activity
AVR83_RS12885	COG0446	pyridine nucleotide-disulphide oxidoreductase
AVR83_RS12890	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AVR83_RS12900	COG0477	Major facilitator Superfamily
AVR83_RS12905	COG0148	phosphopyruvate hydratase activity
AVR83_RS12910	COG2217	Heavy metal translocating P-type atpase
AVR83_RS12930	COG1846	Transcriptional regulator
AVR83_RS12940	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AVR83_RS12940	COG0574	Belongs to the PEP-utilizing enzyme family
AVR83_RS12965	COG2384	SAM-dependent methyltransferase
AVR83_RS12970	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AVR83_RS12980	COG0542	response to heat
AVR83_RS12990	COG0587	DNA-directed DNA polymerase activity
AVR83_RS12995	COG0205	6-phosphofructokinase activity
AVR83_RS13010	COG2996	Protein conserved in bacteria
AVR83_RS13015	COG4974	Belongs to the 'phage' integrase family
AVR83_RS13025	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AVR83_RS13030	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AVR83_RS13035	COG1187	pseudouridine synthase activity
AVR83_RS13040	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
AVR83_RS13050	COG0514	ATP-dependent DNA helicase (RecQ)
AVR83_RS13060	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
AVR83_RS13065	COG0539	negative regulation of cytoplasmic translation
AVR83_RS13070	COG1160	GTP binding
AVR83_RS13080	COG0457	Tetratricopeptide repeat
AVR83_RS13085	COG0561	phosphatase activity
AVR83_RS13090	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
AVR83_RS13095	COG0617	tRNA 3'-terminal CCA addition
AVR83_RS13105	COG0488	(ABC) transporter
AVR83_RS13110	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AVR83_RS13115	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AVR83_RS13120	COG1307	EDD domain protein, DegV family
AVR83_RS13125	COG2755	lipolytic protein G-D-S-L family
AVR83_RS13130	COG4698	Protein conserved in bacteria
AVR83_RS13135	COG4479	Belongs to the UPF0346 family
AVR83_RS13140	COG0793	Belongs to the peptidase S41A family
AVR83_RS13140	COG3409	Peptidoglycan-binding domain 1 protein
AVR83_RS13155	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AVR83_RS13160	COG0604	alcohol dehydrogenase
AVR83_RS13165	COG1733	regulation of RNA biosynthetic process
AVR83_RS13175	COG1215	transferase activity, transferring glycosyl groups
AVR83_RS13190	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AVR83_RS13195	COG1534	Rna-binding protein
AVR83_RS13200	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AVR83_RS13205	COG1713	HD superfamily hydrolase involved in NAD metabolism
AVR83_RS13210	COG0799	negative regulation of ribosome biogenesis
AVR83_RS13215	COG2226	methyltransferase
AVR83_RS13220	COG1323	Belongs to the UPF0348 family
AVR83_RS13240	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AVR83_RS13245	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AVR83_RS13250	COG0745	RESPONSE REGULATOR receiver
AVR83_RS13255	COG5002	protein histidine kinase activity
AVR83_RS13265	COG0419	ATPase involved in DNA repair
AVR83_RS13280	COG0706	membrane insertase activity
AVR83_RS13285	COG1254	Belongs to the acylphosphatase family
AVR83_RS13290	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AVR83_RS13300	COG1733	regulation of RNA biosynthetic process
AVR83_RS13305	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AVR83_RS13310	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AVR83_RS13310	COG0072	phenylalanine-tRNA ligase activity
AVR83_RS13315	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AVR83_RS13320	COG0572	uridine kinase
AVR83_RS13325	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AVR83_RS13340	COG4841	protein insertion into membrane
AVR83_RS13350	COG0768	penicillin binding
AVR83_RS13355	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AVR83_RS13360	COG0705	Rhomboid family
AVR83_RS13360	COG0457	Tetratricopeptide repeat
AVR83_RS13370	COG1940	carbohydrate kinase activity
AVR83_RS13390	COG0584	glycerophosphoryl diester phosphodiesterase
AVR83_RS13395	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AVR83_RS13400	COG0789	Transcriptional regulator
AVR83_RS13445	COG0261	This protein binds to 23S rRNA in the presence of protein L20
AVR83_RS13455	COG0211	Belongs to the bacterial ribosomal protein bL27 family
AVR83_RS13460	COG0006	proline dipeptidase activity
AVR83_RS13465	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AVR83_RS13470	COG1302	Protein conserved in bacteria
AVR83_RS13475	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AVR83_RS13480	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AVR83_RS13485	COG1570	exodeoxyribonuclease VII activity
AVR83_RS13490	COG1722	exodeoxyribonuclease VII activity
AVR83_RS13495	COG0142	geranyltranstransferase activity
AVR83_RS13500	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
AVR83_RS13505	COG1438	arginine binding
AVR83_RS13510	COG0497	DNA recombination
AVR83_RS13525	COG1732	Glycine betaine
AVR83_RS13540	COG0194	GDP metabolic process
AVR83_RS13545	COG1758	RNA polymerase activity
AVR83_RS13550	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AVR83_RS13555	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AVR83_RS13560	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AVR83_RS13565	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AVR83_RS13565	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AVR83_RS13570	COG0631	protein serine/threonine phosphatase activity
AVR83_RS13575	COG0515	serine threonine protein kinase
AVR83_RS13575	COG2815	serine threonine protein kinase
AVR83_RS13580	COG1162	GTPase activity
AVR83_RS13585	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AVR83_RS13590	COG1564	THIamine pyrophosphokinase
AVR83_RS13595	COG0227	Belongs to the bacterial ribosomal protein bL28 family
AVR83_RS13600	COG1302	Protein conserved in bacteria
AVR83_RS13605	COG1461	Dihydroxyacetone kinase
AVR83_RS13610	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AVR83_RS13615	COG0416	fatty acid biosynthetic process
AVR83_RS13620	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AVR83_RS13625	COG0571	ribonuclease III activity
AVR83_RS13630	COG1196	nuclear chromosome segregation
AVR83_RS13635	COG0552	protein localization to endoplasmic reticulum
AVR83_RS13640	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
AVR83_RS13645	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AVR83_RS13650	COG0228	four-way junction DNA binding
AVR83_RS13655	COG1837	Belongs to the UPF0109 family
AVR83_RS13660	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AVR83_RS13665	COG0336	Belongs to the RNA methyltransferase TrmD family
AVR83_RS13670	COG0335	large ribosomal subunit rRNA binding
AVR83_RS13690	COG1131	(ABC) transporter
AVR83_RS13705	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AVR83_RS13705	COG0512	Glutamine amidotransferase of anthranilate synthase
AVR83_RS13710	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AVR83_RS13715	COG0134	indole-3-glycerol-phosphate synthase activity
AVR83_RS13720	COG0135	phosphoribosylanthranilate isomerase activity
AVR83_RS13725	COG0133	tryptophan synthase activity
AVR83_RS13730	COG0159	tryptophan synthase activity
AVR83_RS13745	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AVR83_RS13755	COG1473	amidohydrolase
AVR83_RS13760	COG1063	alcohol dehydrogenase
AVR83_RS13770	COG0300	oxidoreductase activity
AVR83_RS13780	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AVR83_RS13785	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AVR83_RS13790	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AVR83_RS13795	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AVR83_RS13800	COG1028	Short-chain dehydrogenase reductase Sdr
AVR83_RS13805	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AVR83_RS13820	COG0439	Biotin carboxylase
AVR83_RS13835	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AVR83_RS13845	COG1811	Na channel or pump
AVR83_RS13850	COG0583	DNA-binding transcription factor activity
AVR83_RS13855	COG1607	acyl-coa hydrolase
AVR83_RS13860	COG1162	GTPase activity
AVR83_RS13870	COG0477	Major facilitator Superfamily
AVR83_RS13915	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AVR83_RS13920	COG3397	chitin binding
AVR83_RS13935	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
AVR83_RS13945	COG3152	Membrane
AVR83_RS13950	COG1597	lipid kinase activity
AVR83_RS13960	COG2261	transglycosylase associated protein
AVR83_RS13965	COG3237	CsbD-like
AVR83_RS13980	COG1942	4-Oxalocrotonate Tautomerase
AVR83_RS14015	COG0531	amino acid
AVR83_RS14020	COG0561	phosphatase activity
AVR83_RS14025	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
AVR83_RS14025	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AVR83_RS14045	COG2017	converts alpha-aldose to the beta-anomer
AVR83_RS14050	COG1304	FMN binding
AVR83_RS14070	COG1199	ATP-dependent helicase activity
AVR83_RS14070	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AVR83_RS14085	COG0017	Asparaginyl-tRNA synthetase
AVR83_RS14100	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AVR83_RS14105	COG2011	ABC-type metal ion transport system permease component
AVR83_RS14110	COG1464	Belongs to the NlpA lipoprotein family
AVR83_RS14120	COG1177	transmembrane transport
AVR83_RS14125	COG1840	ABC-type Fe3 transport system, periplasmic component
AVR83_RS14140	COG3331	DNA recombination
AVR83_RS14145	COG4474	Belongs to the UPF0398 family
AVR83_RS14150	COG3599	regulation of cell shape
AVR83_RS14160	COG0116	Belongs to the methyltransferase superfamily
AVR83_RS14165	COG1073	alpha beta
AVR83_RS14175	COG1216	Glycosyl transferase, family 2
AVR83_RS14195	COG1619	proteins homologs of microcin C7 resistance protein MccF
AVR83_RS14220	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AVR83_RS14235	COG2759	Belongs to the formate--tetrahydrofolate ligase family
AVR83_RS14240	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AVR83_RS14245	COG0564	pseudouridine synthase activity
AVR83_RS14250	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AVR83_RS14255	COG0505	Belongs to the CarA family
AVR83_RS14260	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AVR83_RS14275	COG5646	InterPro IPR014922
AVR83_RS14300	COG1131	(ABC) transporter
AVR83_RS14310	COG1293	RNA-binding protein homologous to eukaryotic snRNP
AVR83_RS14320	COG1307	EDD domain protein, DegV family
AVR83_RS14375	COG1113	amino acid transport
AVR83_RS14395	COG1620	l-lactate permease
AVR83_RS14405	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
AVR83_RS14430	COG1846	Transcriptional regulator
AVR83_RS14435	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AVR83_RS14470	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AVR83_RS14475	COG1227	inorganic diphosphatase activity
AVR83_RS14480	COG0583	DNA-binding transcription factor activity
AVR83_RS14490	COG0187	DNA topoisomerase II activity
AVR83_RS14495	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
AVR83_RS14505	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
AVR83_RS14510	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
AVR83_RS14515	COG4974	Belongs to the 'phage' integrase family
AVR83_RS14520	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
AVR83_RS14525	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AVR83_RS14530	COG0758	DNA mediated transformation
AVR83_RS14535	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AVR83_RS14540	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AVR83_RS14545	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AVR83_RS14550	COG0583	DNA-binding transcription factor activity
AVR83_RS14565	COG2814	Major facilitator Superfamily
AVR83_RS14575	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AVR83_RS14580	COG0291	Belongs to the bacterial ribosomal protein bL35 family
AVR83_RS14585	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AVR83_RS14590	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AVR83_RS14595	COG1484	DNA-dependent DNA replication
AVR83_RS14600	COG3611	Membrane attachment protein
AVR83_RS14605	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AVR83_RS14610	COG0237	dephospho-CoA kinase activity
AVR83_RS14615	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AVR83_RS14620	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AVR83_RS14620	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AVR83_RS14635	COG2151	metal-sulfur cluster biosynthetic enzyme
AVR83_RS14640	COG0719	Fe-S assembly protein
AVR83_RS14650	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AVR83_RS14655	COG0719	Fe-S assembly protein
AVR83_RS14675	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AVR83_RS14680	COG1674	ftsk spoiiie
AVR83_RS14685	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AVR83_RS14695	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AVR83_RS14700	COG0510	thiamine kinase activity
AVR83_RS14705	COG4473	ABC transporter
AVR83_RS14710	COG1131	(ABC) transporter
AVR83_RS14715	COG0537	adenosine 5'-monophosphoramidase activity
AVR83_RS14725	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AVR83_RS14755	COG0446	pyridine nucleotide-disulphide oxidoreductase
AVR83_RS14765	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AVR83_RS14780	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
AVR83_RS14785	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AVR83_RS14785	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AVR83_RS14790	COG0307	riboflavin synthase, alpha
AVR83_RS14795	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AVR83_RS14795	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AVR83_RS14815	COG0463	Glycosyl transferase, family 2
AVR83_RS14820	COG0586	Pfam SNARE associated Golgi protein
AVR83_RS14825	COG0463	Glycosyl transferase, family 2
AVR83_RS14835	COG0745	RESPONSE REGULATOR receiver
AVR83_RS14840	COG5002	protein histidine kinase activity
AVR83_RS14840	COG3850	Histidine kinase
AVR83_RS14855	COG3976	FMN-binding domain protein
AVR83_RS14855	COG1053	succinate dehydrogenase
AVR83_RS14855	COG0431	NADPH-dependent FMN reductase
AVR83_RS14865	COG0583	DNA-binding transcription factor activity
AVR83_RS14880	COG3481	metal-dependent phosphohydrolase, HD sub domain
AVR83_RS14885	COG4717	serine-type aminopeptidase activity
AVR83_RS14890	COG0420	3'-5' exonuclease activity
AVR83_RS14895	COG3679	Belongs to the UPF0342 family
AVR83_RS14900	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AVR83_RS14905	COG1438	arginine binding
AVR83_RS14910	COG0436	Aminotransferase
AVR83_RS14920	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AVR83_RS14925	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AVR83_RS14930	COG1376	ErfK ybiS ycfS ynhG family protein
AVR83_RS14940	COG2723	6-phospho-beta-galactosidase activity
AVR83_RS14945	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AVR83_RS14950	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AVR83_RS14955	COG1447	Phosphotransferase system cellobiose-specific component IIA
AVR83_RS14975	COG1136	(ABC) transporter
AVR83_RS14975	COG0577	efflux transmembrane transporter activity
AVR83_RS14985	COG0018	arginyl-trna synthetase
AVR83_RS14990	COG2153	protein acetylation
AVR83_RS15010	COG0534	Mate efflux family protein
AVR83_RS15015	COG0471	metal ion transport
AVR83_RS15015	COG3273	potassium ion transport
AVR83_RS15025	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
AVR83_RS15030	COG0529	Catalyzes the synthesis of activated sulfate
AVR83_RS15035	COG2046	Belongs to the sulfate adenylyltransferase family
AVR83_RS15045	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AVR83_RS15050	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
AVR83_RS15050	COG0646	methionine synthase
AVR83_RS15290	COG1396	sequence-specific DNA binding
AVR83_RS15300	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AVR83_RS15325	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AVR83_RS15340	COG1846	Transcriptional regulator
AVR83_RS15360	COG3279	Response regulator of the LytR AlgR family
AVR83_RS15375	COG0561	phosphatase activity
AVR83_RS15390	COG0789	Transcriptional regulator
AVR83_RS15395	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AVR83_RS15420	COG1511	domain protein
AVR83_RS15420	COG1511	domain protein
AVR83_RS15425	COG1970	mechanosensitive ion channel activity
AVR83_RS15430	COG1428	Deoxynucleoside kinase
AVR83_RS15435	COG0584	glycerophosphoryl diester phosphodiesterase
AVR83_RS15445	COG0395	ABC-type sugar transport system, permease component
AVR83_RS15450	COG1175	transmembrane transport
AVR83_RS15465	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AVR83_RS15470	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AVR83_RS15475	COG1187	pseudouridine synthase activity
AVR83_RS15480	COG2244	polysaccharide biosynthetic process
AVR83_RS15485	COG0495	leucyl-tRNA aminoacylation
AVR83_RS15495	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
AVR83_RS15510	COG0438	transferase activity, transferring glycosyl groups
AVR83_RS15530	COG0477	Major facilitator Superfamily
AVR83_RS15535	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AVR83_RS15545	COG0438	transferase activity, transferring glycosyl groups
AVR83_RS15550	COG2040	homocysteine
AVR83_RS15555	COG0833	amino acid
AVR83_RS15560	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
AVR83_RS15570	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AVR83_RS15590	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AVR83_RS15680	COG1368	sulfuric ester hydrolase activity
AVR83_RS15685	COG4703	Protein of unknown function (DUF1797)
AVR83_RS15690	COG0436	Aminotransferase
AVR83_RS15695	COG1686	Belongs to the peptidase S11 family
AVR83_RS15705	COG0438	transferase activity, transferring glycosyl groups
AVR83_RS15710	COG0438	transferase activity, transferring glycosyl groups
AVR83_RS15730	COG0542	response to heat
AVR83_RS15735	COG0582	viral genome integration into host DNA
AVR83_RS15745	COG4608	Belongs to the ABC transporter superfamily
AVR83_RS15750	COG0444	Belongs to the ABC transporter superfamily
AVR83_RS15755	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AVR83_RS15760	COG0601	transmembrane transport
AVR83_RS15765	COG4166	transmembrane transport
AVR83_RS15795	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
AVR83_RS15800	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AVR83_RS15805	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
AVR83_RS15810	COG1070	Carbohydrate kinase
AVR83_RS15815	COG2610	gluconate transmembrane transporter activity
AVR83_RS15820	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AVR83_RS15825	COG0628	permease
AVR83_RS15835	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AVR83_RS15855	COG3557	Belongs to the UPF0374 family
AVR83_RS15860	COG2137	regulation of response to DNA damage stimulus
AVR83_RS15895	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AVR83_RS15915	COG2207	Transcriptional regulator
AVR83_RS15915	COG1609	Transcriptional regulator
AVR83_RS15950	COG0562	UDP-galactopyranose mutase
AVR83_RS16050	COG5039	Polysaccharide pyruvyl transferase
AVR83_RS16065	COG0438	transferase activity, transferring glycosyl groups
AVR83_RS16075	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AVR83_RS16085	COG4464	protein tyrosine phosphatase activity
AVR83_RS16090	COG0489	protein tyrosine kinase activity
AVR83_RS16100	COG0582	viral genome integration into host DNA
AVR83_RS16105	COG1088	dTDP-glucose 4,6-dehydratase activity
AVR83_RS16115	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AVR83_RS16120	COG2244	polysaccharide biosynthetic process
AVR83_RS16165	COG0562	UDP-galactopyranose mutase
AVR83_RS16170	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AVR83_RS16180	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
AVR83_RS16190	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AVR83_RS16215	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AVR83_RS16390	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AVR83_RS16395	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AVR83_RS16405	COG1113	amino acid transport
AVR83_RS16415	COG1914	H( )-stimulated, divalent metal cation uptake system
AVR83_RS16435	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AVR83_RS16470	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AVR83_RS16485	COG1192	Involved in chromosome partitioning
AVR83_RS16620	COG0542	response to heat
AVR83_RS16665	COG1418	mRNA catabolic process
AVR83_RS16670	COG0477	Major facilitator Superfamily
AVR83_RS16760	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AVR83_RS16790	COG0446	pyridine nucleotide-disulphide oxidoreductase
AVR83_RS16800	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AVR83_RS16840	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AVR83_RS16855	COG0860	N-Acetylmuramoyl-L-alanine amidase
AVR83_RS16860	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AVR83_RS16865	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AVR83_RS16875	COG1113	amino acid transport
AVR83_RS16885	COG1914	H( )-stimulated, divalent metal cation uptake system
AVR83_RS16905	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AVR83_RS16970	COG1192	Involved in chromosome partitioning
AVR83_RS17040	COG1846	Transcriptional regulator
AVR83_RS17080	COG0542	response to heat
AVR83_RS17250	COG1192	Involved in chromosome partitioning
AVR83_RS17260	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AVR83_RS17315	COG1846	Transcriptional regulator
AVR83_RS17420	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AVR83_RS17435	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AVR83_RS17445	COG2261	transglycosylase associated protein
AVR83_RS17495	COG3158	transport of potassium into the cell
AVR83_RS17515	COG1215	transferase activity, transferring glycosyl groups
AVR83_RS17540	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
AVR83_RS17600	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AVR83_RS17815	COG0230	Belongs to the bacterial ribosomal protein bL34 family
AVR83_RS17900	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AVR83_RS18200	COG0333	Belongs to the bacterial ribosomal protein bL32 family
AVR83_RS18210	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AVR83_RS18295	COG0333	Belongs to the bacterial ribosomal protein bL32 family
AVR83_RS18405	COG0333	Belongs to the bacterial ribosomal protein bL32 family
AVR83_RS18535	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AVR83_RS18540	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection