locus-tag class description EPJ55_RS00005 PF00308 Bacterial dnaA protein EPJ55_RS00005 PF11638 DnaA N-terminal domain EPJ55_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix EPJ55_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain EPJ55_RS00010 PF02767 DNA polymerase III beta subunit, central domain EPJ55_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain EPJ55_RS00020 PF02463 RecF/RecN/SMC N terminal domain EPJ55_RS00025 PF00204 DNA gyrase B EPJ55_RS00025 PF01751 Toprim domain EPJ55_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPJ55_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus EPJ55_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A EPJ55_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller EPJ55_RS00035 PF01250 Ribosomal protein S6 EPJ55_RS00040 PF00436 Single-strand binding protein family EPJ55_RS00045 PF01084 Ribosomal protein S18 EPJ55_RS00050 PF02272 DHHA1 domain EPJ55_RS00050 PF01368 DHH family EPJ55_RS00055 PF03948 Ribosomal protein L9, C-terminal domain EPJ55_RS00055 PF01281 Ribosomal protein L9, N-terminal domain EPJ55_RS00060 PF03796 DnaB-like helicase C terminal domain EPJ55_RS00060 PF00772 DnaB-like helicase N terminal domain EPJ55_RS00065 PF07690 Major Facilitator Superfamily EPJ55_RS00070 PF00696 Amino acid kinase family EPJ55_RS00075 PF00171 Aldehyde dehydrogenase family EPJ55_RS00080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPJ55_RS00085 PF00128 Alpha amylase, catalytic domain EPJ55_RS00085 PF02806 Alpha amylase, C-terminal all-beta domain EPJ55_RS00085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) EPJ55_RS00090 PF00483 Nucleotidyl transferase EPJ55_RS00100 PF00534 Glycosyl transferases group 1 EPJ55_RS00100 PF08323 Starch synthase catalytic domain EPJ55_RS00105 PF00343 Carbohydrate phosphorylase EPJ55_RS00110 PF00128 Alpha amylase, catalytic domain EPJ55_RS00110 PF02903 Alpha amylase, N-terminal ig-like domain EPJ55_RS00125 PF13419 Haloacid dehalogenase-like hydrolase EPJ55_RS00130 PF03632 Glycosyl hydrolase family 65 central catalytic domain EPJ55_RS00130 PF03636 Glycosyl hydrolase family 65, N-terminal domain EPJ55_RS00130 PF03633 Glycosyl hydrolase family 65, C-terminal domain EPJ55_RS00140 PF00313 'Cold-shock' DNA-binding domain EPJ55_RS00155 PF00072 Response regulator receiver domain EPJ55_RS00155 PF00486 Transcriptional regulatory protein, C terminal EPJ55_RS00160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPJ55_RS00160 PF00512 His Kinase A (phospho-acceptor) domain EPJ55_RS00160 PF13426 PAS domain EPJ55_RS00160 PF00672 HAMP domain EPJ55_RS00170 PF09648 YycH protein EPJ55_RS00175 PF00753 Metallo-beta-lactamase superfamily EPJ55_RS00180 PF13180 PDZ domain EPJ55_RS00185 PF02590 Predicted SPOUT methyltransferase EPJ55_RS00205 PF03167 Uracil DNA glycosylase superfamily EPJ55_RS00225 PF04205 FMN-binding domain EPJ55_RS00225 PF03358 NADPH-dependent FMN reductase EPJ55_RS00225 PF00890 FAD binding domain EPJ55_RS00230 PF00939 Sodium:sulfate symporter transmembrane region EPJ55_RS00245 PF01451 Low molecular weight phosphotyrosine protein phosphatase EPJ55_RS00260 PF00881 Nitroreductase family EPJ55_RS00265 PF17853 GGDEF-like domain EPJ55_RS00265 PF13556 PucR C-terminal helix-turn-helix domain EPJ55_RS00265 PF07905 Purine catabolism regulatory protein-like family EPJ55_RS00270 PF13419 Haloacid dehalogenase-like hydrolase EPJ55_RS00275 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family EPJ55_RS00285 PF13350 Tyrosine phosphatase family EPJ55_RS00290 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal EPJ55_RS00290 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal EPJ55_RS00310 PF02525 Flavodoxin-like fold EPJ55_RS00315 PF00009 Elongation factor Tu GTP binding domain EPJ55_RS00315 PF00679 Elongation factor G C-terminus EPJ55_RS00315 PF14492 Elongation Factor G, domain II EPJ55_RS00315 PF03764 Elongation factor G, domain IV EPJ55_RS00340 PF08240 Alcohol dehydrogenase GroES-like domain EPJ55_RS00340 PF00107 Zinc-binding dehydrogenase EPJ55_RS00350 PF01554 MatE EPJ55_RS00360 PF00561 alpha/beta hydrolase fold EPJ55_RS00365 PF03883 Peroxide stress protein YaaA EPJ55_RS00375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPJ55_RS00400 PF00005 ABC transporter EPJ55_RS00405 PF02361 Cobalt transport protein EPJ55_RS00410 PF01891 Cobalt uptake substrate-specific transmembrane region EPJ55_RS00410 PF13190 PDGLE domain EPJ55_RS00415 PF13545 Crp-like helix-turn-helix domain EPJ55_RS00420 PF09861 Lactate racemase N-terminal domain EPJ55_RS00425 PF00731 AIR carboxylase EPJ55_RS00430 PF01969 Protein of unknown function DUF111 EPJ55_RS00435 PF01969 Protein of unknown function DUF111 EPJ55_RS00440 PF00230 Major intrinsic protein EPJ55_RS00445 PF02540 NAD synthase EPJ55_RS00450 PF00107 Zinc-binding dehydrogenase EPJ55_RS00450 PF08240 Alcohol dehydrogenase GroES-like domain EPJ55_RS00455 PF02110 Hydroxyethylthiazole kinase family EPJ55_RS00460 PF08543 Phosphomethylpyrimidine kinase EPJ55_RS00465 PF02581 Thiamine monophosphate synthase EPJ55_RS00475 PF07722 Peptidase C26 EPJ55_RS00485 PF13344 Haloacid dehalogenase-like hydrolase EPJ55_RS00485 PF00293 NUDIX domain EPJ55_RS00490 PF00324 Amino acid permease EPJ55_RS00500 PF00561 alpha/beta hydrolase fold EPJ55_RS00505 PF00690 Cation transporter/ATPase, N-terminus EPJ55_RS00505 PF00689 Cation transporting ATPase, C-terminus EPJ55_RS00510 PF01048 Phosphorylase superfamily EPJ55_RS00515 PF04024 PspC domain EPJ55_RS00530 PF00011 Hsp20/alpha crystallin family EPJ55_RS00540 PF00083 Sugar (and other) transporter EPJ55_RS00540 PF07690 Major Facilitator Superfamily EPJ55_RS00550 PF07690 Major Facilitator Superfamily EPJ55_RS00555 PF00248 Aldo/keto reductase family EPJ55_RS00560 PF00248 Aldo/keto reductase family EPJ55_RS00570 PF06100 MCRA family EPJ55_RS00585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family EPJ55_RS00590 PF02361 Cobalt transport protein EPJ55_RS00595 PF12558 ATP-binding cassette cobalt transporter EPJ55_RS00595 PF00005 ABC transporter EPJ55_RS00600 PF07155 ECF-type riboflavin transporter, S component EPJ55_RS00610 PF00392 Bacterial regulatory proteins, gntR family EPJ55_RS00610 PF07702 UTRA domain EPJ55_RS00635 PF00106 short chain dehydrogenase EPJ55_RS00640 PF13732 Domain of unknown function (DUF4162) EPJ55_RS00640 PF00005 ABC transporter EPJ55_RS00655 PF01012 Electron transfer flavoprotein domain EPJ55_RS00655 PF00766 Electron transfer flavoprotein FAD-binding domain EPJ55_RS00660 PF12822 ECF transporter, substrate-specific component EPJ55_RS00665 PF00440 Bacterial regulatory proteins, tetR family EPJ55_RS00665 PF14278 Transcriptional regulator C-terminal region EPJ55_RS00670 PF02733 Dak1 domain EPJ55_RS00675 PF02733 Dak1 domain EPJ55_RS00680 PF02734 DAK2 domain EPJ55_RS00685 PF03610 PTS system fructose IIA component EPJ55_RS00690 PF00230 Major intrinsic protein EPJ55_RS00695 PF00356 Bacterial regulatory proteins, lacI family EPJ55_RS00700 PF00356 Bacterial regulatory proteins, lacI family EPJ55_RS00705 PF00128 Alpha amylase, catalytic domain EPJ55_RS00710 PF13416 Bacterial extracellular solute-binding protein EPJ55_RS00715 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS00720 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS00730 PF11896 Domain of unknown function (DUF3416) EPJ55_RS00730 PF00128 Alpha amylase, catalytic domain EPJ55_RS00735 PF17912 MalK OB fold domain EPJ55_RS00735 PF00005 ABC transporter EPJ55_RS00735 PF03459 TOBE domain EPJ55_RS00740 PF03633 Glycosyl hydrolase family 65, C-terminal domain EPJ55_RS00740 PF03636 Glycosyl hydrolase family 65, N-terminal domain EPJ55_RS00740 PF03632 Glycosyl hydrolase family 65 central catalytic domain EPJ55_RS00755 PF00480 ROK family EPJ55_RS00765 PF02378 Phosphotransferase system, EIIC EPJ55_RS00765 PF00367 phosphotransferase system, EIIB EPJ55_RS00765 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EPJ55_RS00770 PF00251 Glycosyl hydrolases family 32 N-terminal domain EPJ55_RS00770 PF08244 Glycosyl hydrolases family 32 C terminal EPJ55_RS00775 PF00356 Bacterial regulatory proteins, lacI family EPJ55_RS00780 PF00128 Alpha amylase, catalytic domain EPJ55_RS00790 PF03553 Na+/H+ antiporter family EPJ55_RS00800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPJ55_RS00800 PF03466 LysR substrate binding domain EPJ55_RS00820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPJ55_RS00825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPJ55_RS00835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EPJ55_RS00835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EPJ55_RS00835 PF01842 ACT domain EPJ55_RS00840 PF00266 Aminotransferase class-V EPJ55_RS00845 PF00300 Histidine phosphatase superfamily (branch 1) EPJ55_RS00850 PF00248 Aldo/keto reductase family EPJ55_RS00865 PF05670 NFACT protein RNA binding domain EPJ55_RS00870 PF00871 Acetokinase family EPJ55_RS00880 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EPJ55_RS00885 PF02537 CrcB-like protein, Camphor Resistance (CrcB) EPJ55_RS00890 PF12848 ABC transporter EPJ55_RS00890 PF00005 ABC transporter EPJ55_RS00900 PF00005 ABC transporter EPJ55_RS00910 PF00255 Glutathione peroxidase EPJ55_RS00915 PF00248 Aldo/keto reductase family EPJ55_RS00920 PF01272 Transcription elongation factor, GreA/GreB, C-term EPJ55_RS00920 PF03449 Transcription elongation factor, N-terminal EPJ55_RS00935 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase EPJ55_RS00940 PF03577 Peptidase family C69 EPJ55_RS00945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EPJ55_RS00945 PF02378 Phosphotransferase system, EIIC EPJ55_RS00955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EPJ55_RS00960 PF01232 Mannitol dehydrogenase Rossmann domain EPJ55_RS00960 PF08125 Mannitol dehydrogenase C-terminal domain EPJ55_RS00970 PF00085 Thioredoxin EPJ55_RS00990 PF00334 Nucleoside diphosphate kinase EPJ55_RS01000 PF03358 NADPH-dependent FMN reductase EPJ55_RS01005 PF00132 Bacterial transferase hexapeptide (six repeats) EPJ55_RS01010 PF01053 Cys/Met metabolism PLP-dependent enzyme EPJ55_RS01015 PF00291 Pyridoxal-phosphate dependent enzyme EPJ55_RS01020 PF00557 Metallopeptidase family M24 EPJ55_RS01040 PF00392 Bacterial regulatory proteins, gntR family EPJ55_RS01040 PF07702 UTRA domain EPJ55_RS01055 PF00367 phosphotransferase system, EIIB EPJ55_RS01055 PF02378 Phosphotransferase system, EIIC EPJ55_RS01055 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EPJ55_RS01065 PF01467 Cytidylyltransferase-like EPJ55_RS01070 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase EPJ55_RS01075 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase EPJ55_RS01085 PF02441 Flavoprotein EPJ55_RS01110 PF02082 Transcriptional regulator EPJ55_RS01115 PF00440 Bacterial regulatory proteins, tetR family EPJ55_RS01120 PF01566 Natural resistance-associated macrophage protein EPJ55_RS01140 PF07690 Major Facilitator Superfamily EPJ55_RS01155 PF00486 Transcriptional regulatory protein, C terminal EPJ55_RS01155 PF00072 Response regulator receiver domain EPJ55_RS01170 PF01380 SIS domain EPJ55_RS01170 PF01418 Helix-turn-helix domain, rpiR family EPJ55_RS01175 PF02378 Phosphotransferase system, EIIC EPJ55_RS01190 PF03816 Cell envelope-related transcriptional attenuator domain EPJ55_RS01205 PF04607 Region found in RelA / SpoT proteins EPJ55_RS01215 PF03176 MMPL family EPJ55_RS01215 PF03176 MMPL family EPJ55_RS01220 PF03352 Methyladenine glycosylase EPJ55_RS01230 PF02687 FtsX-like permease family EPJ55_RS01230 PF12704 MacB-like periplasmic core domain EPJ55_RS01235 PF00005 ABC transporter EPJ55_RS01250 PF06737 Transglycosylase-like domain EPJ55_RS01255 PF05257 CHAP domain EPJ55_RS01255 PF01476 LysM domain EPJ55_RS01285 PF00871 Acetokinase family EPJ55_RS01295 PF01047 MarR family EPJ55_RS01300 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPJ55_RS01310 PF13416 Bacterial extracellular solute-binding protein EPJ55_RS01325 PF00005 ABC transporter EPJ55_RS01325 PF08402 TOBE domain EPJ55_RS01355 PF00392 Bacterial regulatory proteins, gntR family EPJ55_RS01360 PF00005 ABC transporter EPJ55_RS01370 PF00465 Iron-containing alcohol dehydrogenase EPJ55_RS01370 PF00171 Aldehyde dehydrogenase family EPJ55_RS01375 PF01116 Fructose-bisphosphate aldolase class-II EPJ55_RS01395 PF03577 Peptidase family C69 EPJ55_RS01405 PF02632 BioY family EPJ55_RS01420 PF03180 NLPA lipoprotein EPJ55_RS01425 PF09383 NIL domain EPJ55_RS01425 PF00005 ABC transporter EPJ55_RS01430 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS01435 PF02558 Ketopantoate reductase PanE/ApbA EPJ55_RS01435 PF08546 Ketopantoate reductase PanE/ApbA C terminal EPJ55_RS01440 PF00155 Aminotransferase class I and II EPJ55_RS01450 PF01061 ABC-2 type transporter EPJ55_RS01455 PF00005 ABC transporter EPJ55_RS01470 PF07690 Major Facilitator Superfamily EPJ55_RS01475 PF00909 Ammonium Transporter Family EPJ55_RS01480 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EPJ55_RS01480 PF00056 lactate/malate dehydrogenase, NAD binding domain EPJ55_RS01495 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EPJ55_RS01500 PF07731 Multicopper oxidase EPJ55_RS01500 PF07732 Multicopper oxidase EPJ55_RS01505 PF06993 Protein of unknown function (DUF1304) EPJ55_RS01510 PF01161 Phosphatidylethanolamine-binding protein EPJ55_RS01535 PF01156 Inosine-uridine preferring nucleoside hydrolase EPJ55_RS01540 PF00106 short chain dehydrogenase EPJ55_RS01550 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS01555 PF00005 ABC transporter EPJ55_RS01560 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPJ55_RS01560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EPJ55_RS01565 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EPJ55_RS01565 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EPJ55_RS01570 PF01266 FAD dependent oxidoreductase EPJ55_RS01570 PF16901 C-terminal domain of alpha-glycerophosphate oxidase EPJ55_RS01575 PF00230 Major intrinsic protein EPJ55_RS01675 PF04397 LytTr DNA-binding domain EPJ55_RS01675 PF00072 Response regulator receiver domain EPJ55_RS01680 PF04397 LytTr DNA-binding domain EPJ55_RS01680 PF00072 Response regulator receiver domain EPJ55_RS01710 PF03412 Peptidase C39 family EPJ55_RS01710 PF00664 ABC transporter transmembrane region EPJ55_RS01710 PF00005 ABC transporter EPJ55_RS01745 PF13538 UvrD-like helicase C-terminal domain EPJ55_RS01750 PF00795 Carbon-nitrogen hydrolase EPJ55_RS01755 PF00579 tRNA synthetases class I (W and Y) EPJ55_RS01760 PF00392 Bacterial regulatory proteins, gntR family EPJ55_RS01760 PF07702 UTRA domain EPJ55_RS01770 PF02378 Phosphotransferase system, EIIC EPJ55_RS01785 PF02378 Phosphotransferase system, EIIC EPJ55_RS01790 PF00232 Glycosyl hydrolase family 1 EPJ55_RS01795 PF00480 ROK family EPJ55_RS01800 PF01380 SIS domain EPJ55_RS01800 PF01418 Helix-turn-helix domain, rpiR family EPJ55_RS01805 PF01207 Dihydrouridine synthase (Dus) EPJ55_RS01810 PF02541 Ppx/GppA phosphatase family EPJ55_RS01825 PF02146 Sir2 family EPJ55_RS01830 PF01904 Protein of unknown function DUF72 EPJ55_RS01840 PF08264 Anticodon-binding domain of tRNA EPJ55_RS01840 PF09334 tRNA synthetases class I (M) EPJ55_RS01840 PF01588 Putative tRNA binding domain EPJ55_RS01845 PF07690 Major Facilitator Superfamily EPJ55_RS01850 PF01026 TatD related DNase EPJ55_RS01855 PF13331 Domain of unknown function (DUF4093) EPJ55_RS01860 PF00398 Ribosomal RNA adenine dimethylase EPJ55_RS01865 PF06257 Biofilm formation stimulator VEG EPJ55_RS01870 PF08544 GHMP kinases C terminal EPJ55_RS01870 PF00288 GHMP kinases N terminal domain EPJ55_RS01875 PF12146 Serine aminopeptidase, S33 EPJ55_RS01880 PF00005 ABC transporter EPJ55_RS01885 PF00950 ABC 3 transport family EPJ55_RS01890 PF09182 Bacterial purine repressor, N-terminal EPJ55_RS01890 PF00156 Phosphoribosyl transferase domain EPJ55_RS01895 PF00132 Bacterial transferase hexapeptide (six repeats) EPJ55_RS01895 PF00483 Nucleotidyl transferase EPJ55_RS01905 PF14572 Phosphoribosyl synthetase-associated domain EPJ55_RS01905 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EPJ55_RS01925 PF01966 HD domain EPJ55_RS01930 PF03099 Biotin/lipoate A/B protein ligase family EPJ55_RS01940 PF05066 HB1, ASXL, restriction endonuclease HTH domain EPJ55_RS01945 PF00117 Glutamine amidotransferase class-I EPJ55_RS01945 PF06418 CTP synthase N-terminus EPJ55_RS01950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EPJ55_RS01950 PF02403 Seryl-tRNA synthetase N-terminal domain EPJ55_RS01960 PF01842 ACT domain EPJ55_RS01960 PF03315 Serine dehydratase beta chain EPJ55_RS01965 PF03313 Serine dehydratase alpha chain EPJ55_RS01980 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EPJ55_RS01985 PF07498 Rho termination factor, N-terminal domain EPJ55_RS01985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EPJ55_RS01985 PF07497 Rho termination factor, RNA-binding domain EPJ55_RS01990 PF01197 Ribosomal protein L31 EPJ55_RS02000 PF04203 Sortase domain EPJ55_RS02005 PF04011 LemA family EPJ55_RS02010 PF01435 Peptidase family M48 EPJ55_RS02020 PF01225 Mur ligase family, catalytic domain EPJ55_RS02020 PF08245 Mur ligase middle domain EPJ55_RS02020 PF02875 Mur ligase family, glutamate ligase domain EPJ55_RS02025 PF00270 DEAD/DEAH box helicase EPJ55_RS02025 PF00271 Helicase conserved C-terminal domain EPJ55_RS02030 PF01648 4'-phosphopantetheinyl transferase superfamily EPJ55_RS02035 PF00842 Alanine racemase, C-terminal domain EPJ55_RS02035 PF01168 Alanine racemase, N-terminal domain EPJ55_RS02040 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system EPJ55_RS02045 PF02705 K+ potassium transporter EPJ55_RS02060 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EPJ55_RS02060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EPJ55_RS02065 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EPJ55_RS02065 PF00117 Glutamine amidotransferase class-I EPJ55_RS02070 PF02774 Semialdehyde dehydrogenase, dimerisation domain EPJ55_RS02070 PF01118 Semialdehyde dehydrogenase, NAD binding domain EPJ55_RS02075 PF01960 ArgJ family EPJ55_RS02080 PF00696 Amino acid kinase family EPJ55_RS02085 PF00202 Aminotransferase class-III EPJ55_RS02090 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EPJ55_RS02090 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EPJ55_RS02110 PF00056 lactate/malate dehydrogenase, NAD binding domain EPJ55_RS02110 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EPJ55_RS02115 PF01195 Peptidyl-tRNA hydrolase EPJ55_RS02120 PF00270 DEAD/DEAH box helicase EPJ55_RS02120 PF02559 CarD-like/TRCF domain EPJ55_RS02120 PF00271 Helicase conserved C-terminal domain EPJ55_RS02120 PF17757 UvrB interaction domain EPJ55_RS02120 PF03461 TRCF domain EPJ55_RS02125 PF14667 Polysaccharide biosynthesis C-terminal domain EPJ55_RS02125 PF01943 Polysaccharide biosynthesis protein EPJ55_RS02130 PF01479 S4 domain EPJ55_RS02140 PF00575 S1 RNA binding domain EPJ55_RS02145 PF01171 PP-loop family EPJ55_RS02145 PF11734 TilS substrate C-terminal domain EPJ55_RS02150 PF01171 PP-loop family EPJ55_RS02150 PF00156 Phosphoribosyl transferase domain EPJ55_RS02150 PF11734 TilS substrate C-terminal domain EPJ55_RS02155 PF01434 Peptidase family M41 EPJ55_RS02155 PF17862 AAA+ lid domain EPJ55_RS02155 PF06480 FtsH Extracellular EPJ55_RS02155 PF00004 ATPase family associated with various cellular activities (AAA) EPJ55_RS02160 PF01430 Hsp33 protein EPJ55_RS02165 PF01207 Dihydrouridine synthase (Dus) EPJ55_RS02170 PF00152 tRNA synthetases class II (D, K and N) EPJ55_RS02170 PF01336 OB-fold nucleic acid binding domain EPJ55_RS02210 PF00854 POT family EPJ55_RS02255 PF04973 Nicotinamide mononucleotide transporter EPJ55_RS02260 PF14748 Pyrroline-5-carboxylate reductase dimerisation EPJ55_RS02260 PF03807 NADP oxidoreductase coenzyme F420-dependent EPJ55_RS02265 PF13382 Adenine deaminase C-terminal domain EPJ55_RS02265 PF01979 Amidohydrolase family EPJ55_RS02270 PF07702 UTRA domain EPJ55_RS02270 PF00392 Bacterial regulatory proteins, gntR family EPJ55_RS02275 PF03808 Glycosyl transferase WecB/TagA/CpsF family EPJ55_RS02280 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain EPJ55_RS02280 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EPJ55_RS02280 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EPJ55_RS02285 PF02540 NAD synthase EPJ55_RS02290 PF00689 Cation transporting ATPase, C-terminus EPJ55_RS02290 PF00690 Cation transporter/ATPase, N-terminus EPJ55_RS02300 PF00575 S1 RNA binding domain EPJ55_RS02300 PF09371 Tex-like protein N-terminal domain EPJ55_RS02300 PF16921 Tex protein YqgF-like domain EPJ55_RS02300 PF17674 HHH domain EPJ55_RS02305 PF10263 SprT-like family EPJ55_RS02310 PF01842 ACT domain EPJ55_RS02310 PF03447 Homoserine dehydrogenase, NAD binding domain EPJ55_RS02310 PF00742 Homoserine dehydrogenase EPJ55_RS02315 PF08544 GHMP kinases C terminal EPJ55_RS02315 PF00288 GHMP kinases N terminal domain EPJ55_RS02330 PF03830 PTS system sorbose subfamily IIB component EPJ55_RS02330 PF03610 PTS system fructose IIA component EPJ55_RS02335 PF03609 PTS system sorbose-specific iic component EPJ55_RS02340 PF03613 PTS system mannose/fructose/sorbose family IID component EPJ55_RS02350 PF00158 Sigma-54 interaction domain EPJ55_RS02350 PF00874 PRD domain EPJ55_RS02350 PF03610 PTS system fructose IIA component EPJ55_RS02355 PF03610 PTS system fructose IIA component EPJ55_RS02355 PF03830 PTS system sorbose subfamily IIB component EPJ55_RS02360 PF03830 PTS system sorbose subfamily IIB component EPJ55_RS02360 PF03610 PTS system fructose IIA component EPJ55_RS02365 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EPJ55_RS02365 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EPJ55_RS02375 PF00289 Biotin carboxylase, N-terminal domain EPJ55_RS02375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EPJ55_RS02375 PF02785 Biotin carboxylase C-terminal domain EPJ55_RS02380 PF01039 Carboxyl transferase domain EPJ55_RS02385 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EPJ55_RS02390 PF03816 Cell envelope-related transcriptional attenuator domain EPJ55_RS02400 PF00892 EamA-like transporter family EPJ55_RS02405 PF00300 Histidine phosphatase superfamily (branch 1) EPJ55_RS02415 PF03051 Peptidase C1-like family EPJ55_RS02420 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EPJ55_RS02430 PF00692 dUTPase EPJ55_RS02435 PF18073 Rubredoxin metal binding domain EPJ55_RS02445 PF00749 tRNA synthetases class I (E and Q), catalytic domain EPJ55_RS02450 PF01406 tRNA synthetases class I (C) catalytic domain EPJ55_RS02450 PF09190 DALR domain EPJ55_RS02455 PF00636 Ribonuclease III domain EPJ55_RS02475 PF00471 Ribosomal protein L33 EPJ55_RS02485 PF00467 KOW motif EPJ55_RS02485 PF02357 Transcription termination factor nusG EPJ55_RS02495 PF00298 Ribosomal protein L11, RNA binding domain EPJ55_RS02495 PF03946 Ribosomal protein L11, N-terminal domain EPJ55_RS02500 PF00687 Ribosomal protein L1p/L10e family EPJ55_RS02505 PF00466 Ribosomal protein L10 EPJ55_RS02510 PF00542 Ribosomal protein L7/L12 C-terminal domain EPJ55_RS02510 PF16320 Ribosomal protein L7/L12 dimerisation domain EPJ55_RS02525 PF03706 Lysylphosphatidylglycerol synthase TM region EPJ55_RS02525 PF09924 Uncharacterised conserved protein (DUF2156) EPJ55_RS02535 PF03641 Possible lysine decarboxylase EPJ55_RS02540 PF00268 Ribonucleotide reductase, small chain EPJ55_RS02545 PF02867 Ribonucleotide reductase, barrel domain EPJ55_RS02545 PF00317 Ribonucleotide reductase, all-alpha domain EPJ55_RS02545 PF08343 Ribonucleotide reductase N-terminal EPJ55_RS02550 PF00462 Glutaredoxin EPJ55_RS02555 PF05175 Methyltransferase small domain EPJ55_RS02560 PF14437 MafB19-like deaminase EPJ55_RS02570 PF12169 DNA polymerase III subunits gamma and tau domain III EPJ55_RS02575 PF02575 YbaB/EbfC DNA-binding family EPJ55_RS02580 PF13662 Toprim domain EPJ55_RS02580 PF02132 RecR protein EPJ55_RS02590 PF02223 Thymidylate kinase EPJ55_RS02595 PF06153 Cyclic-di-AMP receptor EPJ55_RS02600 PF09115 DNA polymerase III, delta subunit, C terminal EPJ55_RS02605 PF06156 Initiation control protein YabA EPJ55_RS02610 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases EPJ55_RS02620 PF16363 GDP-mannose 4,6 dehydratase EPJ55_RS02630 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS02635 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS02640 PF00005 ABC transporter EPJ55_RS02650 PF00814 Glycoprotease family EPJ55_RS02655 PF00583 Acetyltransferase (GNAT) family EPJ55_RS02660 PF00583 Acetyltransferase (GNAT) family EPJ55_RS02665 PF00814 Glycoprotease family EPJ55_RS02670 PF00005 ABC transporter EPJ55_RS02670 PF12848 ABC transporter EPJ55_RS02670 PF16326 ABC transporter C-terminal domain EPJ55_RS02675 PF06971 Putative DNA-binding protein N-terminus EPJ55_RS02675 PF02629 CoA binding domain EPJ55_RS02680 PF02517 CPBP intramembrane metalloprotease EPJ55_RS02685 PF00166 Chaperonin 10 Kd subunit EPJ55_RS02690 PF00118 TCP-1/cpn60 chaperonin family EPJ55_RS02695 PF13520 Amino acid permease EPJ55_RS02700 PF00953 Glycosyl transferase family 4 EPJ55_RS02705 PF12849 PBP superfamily domain EPJ55_RS02710 PF01205 Uncharacterized protein family UPF0029 EPJ55_RS02710 PF09186 Domain of unknown function (DUF1949) EPJ55_RS02715 PF04851 Type III restriction enzyme, res subunit EPJ55_RS02715 PF00271 Helicase conserved C-terminal domain EPJ55_RS02725 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein EPJ55_RS02725 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus EPJ55_RS02730 PF07517 SecA DEAD-like domain EPJ55_RS02730 PF01043 SecA preprotein cross-linking domain EPJ55_RS02730 PF07516 SecA Wing and Scaffold domain EPJ55_RS02740 PF17820 PDZ domain EPJ55_RS02745 PF00072 Response regulator receiver domain EPJ55_RS02745 PF00486 Transcriptional regulatory protein, C terminal EPJ55_RS02750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPJ55_RS02750 PF00989 PAS fold EPJ55_RS02750 PF16736 Single Cache-like EPJ55_RS02750 PF00512 His Kinase A (phospho-acceptor) domain EPJ55_RS02755 PF12849 PBP superfamily domain EPJ55_RS02760 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS02765 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS02770 PF00005 ABC transporter EPJ55_RS02775 PF00005 ABC transporter EPJ55_RS02780 PF01895 PhoU domain EPJ55_RS02785 PF04024 PspC domain EPJ55_RS02790 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV EPJ55_RS02795 PF02603 HPr Serine kinase N terminus EPJ55_RS02795 PF07475 HPr Serine kinase C-terminal domain EPJ55_RS02800 PF01790 Prolipoprotein diacylglyceryl transferase EPJ55_RS02805 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus EPJ55_RS02805 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus EPJ55_RS02810 PF00483 Nucleotidyl transferase EPJ55_RS02820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EPJ55_RS02820 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPJ55_RS02825 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPJ55_RS02830 PF04239 Protein of unknown function (DUF421) EPJ55_RS02840 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EPJ55_RS02840 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EPJ55_RS02840 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EPJ55_RS02840 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EPJ55_RS02850 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPJ55_RS02850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EPJ55_RS02860 PF07690 Major Facilitator Superfamily EPJ55_RS02870 PF17757 UvrB interaction domain EPJ55_RS02870 PF12344 Ultra-violet resistance protein B EPJ55_RS02870 PF02151 UvrB/uvrC motif EPJ55_RS02870 PF04851 Type III restriction enzyme, res subunit EPJ55_RS02870 PF00271 Helicase conserved C-terminal domain EPJ55_RS02875 PF17755 UvrA DNA-binding domain EPJ55_RS02875 PF17760 UvrA interaction domain EPJ55_RS02875 PF00005 ABC transporter EPJ55_RS02880 PF02664 S-Ribosylhomocysteinase (LuxS) EPJ55_RS02885 PF00764 Arginosuccinate synthase EPJ55_RS02890 PF14698 Argininosuccinate lyase C-terminal EPJ55_RS02890 PF00206 Lyase EPJ55_RS02900 PF03668 P-loop ATPase protein family EPJ55_RS02905 PF01933 Uncharacterised protein family UPF0052 EPJ55_RS02910 PF10298 WhiA N-terminal LAGLIDADG-like domain EPJ55_RS02910 PF14527 WhiA LAGLIDADG-like domain EPJ55_RS02910 PF02650 WhiA C-terminal HTH domain EPJ55_RS02915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPJ55_RS02920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EPJ55_RS02920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EPJ55_RS02925 PF00574 Clp protease EPJ55_RS02935 PF00309 Sigma-54 factor, Activator interacting domain (AID) EPJ55_RS02935 PF04963 Sigma-54 factor, core binding domain EPJ55_RS02935 PF04552 Sigma-54, DNA binding domain EPJ55_RS02940 PF04198 Putative sugar-binding domain EPJ55_RS02945 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EPJ55_RS02945 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain EPJ55_RS02950 PF00162 Phosphoglycerate kinase EPJ55_RS02955 PF00121 Triosephosphate isomerase EPJ55_RS02960 PF00113 Enolase, C-terminal TIM barrel domain EPJ55_RS02960 PF03952 Enolase, N-terminal domain EPJ55_RS02970 PF00654 Voltage gated chloride channel EPJ55_RS02975 PF03840 Preprotein translocase SecG subunit EPJ55_RS02980 PF12146 Serine aminopeptidase, S33 EPJ55_RS02985 PF00575 S1 RNA binding domain EPJ55_RS02985 PF08206 Ribonuclease B OB domain EPJ55_RS02985 PF00773 RNB domain EPJ55_RS02985 PF17876 Cold shock domain EPJ55_RS02990 PF01668 SmpB protein EPJ55_RS03000 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS03005 PF00005 ABC transporter EPJ55_RS03020 PF03167 Uracil DNA glycosylase superfamily EPJ55_RS03025 PF01515 Phosphate acetyl/butaryl transferase EPJ55_RS03030 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE EPJ55_RS03040 PF14480 DNA polymerase III polC-type N-terminus I EPJ55_RS03040 PF00929 Exonuclease EPJ55_RS03040 PF07733 Bacterial DNA polymerase III alpha NTPase domain EPJ55_RS03040 PF11490 DNA polymerase III polC-type N-terminus II EPJ55_RS03040 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EPJ55_RS03040 PF02811 PHP domain EPJ55_RS03040 PF14579 Helix-hairpin-helix motif EPJ55_RS03045 PF03372 Endonuclease/Exonuclease/phosphatase family EPJ55_RS03050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EPJ55_RS03055 PF01565 FAD binding domain EPJ55_RS03055 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain EPJ55_RS03060 PF00999 Sodium/hydrogen exchanger family EPJ55_RS03075 PF02457 DisA bacterial checkpoint controller nucleotide-binding EPJ55_RS03085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I EPJ55_RS03085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain EPJ55_RS03085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II EPJ55_RS03085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III EPJ55_RS03090 PF01380 SIS domain EPJ55_RS03110 PF01263 Aldose 1-epimerase EPJ55_RS03125 PF00881 Nitroreductase family EPJ55_RS03135 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EPJ55_RS03135 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EPJ55_RS03150 PF03960 ArsC family EPJ55_RS03165 PF07690 Major Facilitator Superfamily EPJ55_RS03170 PF02541 Ppx/GppA phosphatase family EPJ55_RS03175 PF13089 Polyphosphate kinase N-terminal domain EPJ55_RS03175 PF17941 Polyphosphate kinase C-terminal domain 1 EPJ55_RS03175 PF02503 Polyphosphate kinase middle domain EPJ55_RS03175 PF13090 Polyphosphate kinase C-terminal domain 2 EPJ55_RS03190 PF04991 LicD family EPJ55_RS03205 PF00860 Permease family EPJ55_RS03210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EPJ55_RS03210 PF00205 Thiamine pyrophosphate enzyme, central domain EPJ55_RS03210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EPJ55_RS03215 PF06574 FAD synthetase EPJ55_RS03215 PF01687 Riboflavin kinase EPJ55_RS03220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EPJ55_RS03220 PF00205 Thiamine pyrophosphate enzyme, central domain EPJ55_RS03220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EPJ55_RS03225 PF00561 alpha/beta hydrolase fold EPJ55_RS03235 PF01757 Acyltransferase family EPJ55_RS03240 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain EPJ55_RS03240 PF02129 X-Pro dipeptidyl-peptidase (S15 family) EPJ55_RS03240 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal EPJ55_RS03255 PF13520 Amino acid permease EPJ55_RS03270 PF03099 Biotin/lipoate A/B protein ligase family EPJ55_RS03270 PF00293 NUDIX domain EPJ55_RS03280 PF00625 Guanylate kinase EPJ55_RS03285 PF01475 Ferric uptake regulator family EPJ55_RS03300 PF13419 Haloacid dehalogenase-like hydrolase EPJ55_RS03305 PF00155 Aminotransferase class I and II EPJ55_RS03310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EPJ55_RS03310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EPJ55_RS03320 PF00005 ABC transporter EPJ55_RS03325 PF00497 Bacterial extracellular solute-binding proteins, family 3 EPJ55_RS03330 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS03335 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS03340 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EPJ55_RS03340 PF00367 phosphotransferase system, EIIB EPJ55_RS03340 PF02378 Phosphotransferase system, EIIC EPJ55_RS03350 PF02378 Phosphotransferase system, EIIC EPJ55_RS03350 PF00367 phosphotransferase system, EIIB EPJ55_RS03355 PF04794 YdjC-like protein EPJ55_RS03360 PF13520 Amino acid permease EPJ55_RS03365 PF01047 MarR family EPJ55_RS03395 PF01926 50S ribosome-binding GTPase EPJ55_RS03395 PF16360 GTP-binding GTPase Middle Region EPJ55_RS03395 PF13167 GTP-binding GTPase N-terminal EPJ55_RS03400 PF00293 NUDIX domain EPJ55_RS03400 PF13344 Haloacid dehalogenase-like hydrolase EPJ55_RS03405 PF00893 Small Multidrug Resistance protein EPJ55_RS03415 PF00300 Histidine phosphatase superfamily (branch 1) EPJ55_RS03420 PF00300 Histidine phosphatase superfamily (branch 1) EPJ55_RS03425 PF00999 Sodium/hydrogen exchanger family EPJ55_RS03425 PF02254 TrkA-N domain EPJ55_RS03425 PF02080 TrkA-C domain EPJ55_RS03430 PF13673 Acetyltransferase (GNAT) domain EPJ55_RS03430 PF04229 GrpB protein EPJ55_RS03435 PF00874 PRD domain EPJ55_RS03435 PF03123 CAT RNA binding domain EPJ55_RS03440 PF00367 phosphotransferase system, EIIB EPJ55_RS03440 PF02378 Phosphotransferase system, EIIC EPJ55_RS03440 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EPJ55_RS03445 PF00232 Glycosyl hydrolase family 1 EPJ55_RS03450 PF09335 SNARE associated Golgi protein EPJ55_RS03455 PF13538 UvrD-like helicase C-terminal domain EPJ55_RS03460 PF03060 Nitronate monooxygenase EPJ55_RS03465 PF00485 Phosphoribulokinase / Uridine kinase family EPJ55_RS03470 PF00117 Glutamine amidotransferase class-I EPJ55_RS03470 PF00958 GMP synthase C terminal domain EPJ55_RS03470 PF02540 NAD synthase EPJ55_RS03480 PF13936 Helix-turn-helix domain EPJ55_RS03480 PF00665 Integrase core domain EPJ55_RS03485 PF01381 Helix-turn-helix EPJ55_RS03495 PF02517 CPBP intramembrane metalloprotease EPJ55_RS03505 PF01381 Helix-turn-helix EPJ55_RS03535 PF01757 Acyltransferase family EPJ55_RS03540 PF04226 Transglycosylase associated protein EPJ55_RS03555 PF03780 Asp23 family, cell envelope-related function EPJ55_RS03565 PF01557 Fumarylacetoacetate (FAA) hydrolase family EPJ55_RS03585 PF01433 Peptidase family M1 domain EPJ55_RS03585 PF11838 ERAP1-like C-terminal domain EPJ55_RS03605 PF06458 MucBP domain EPJ55_RS03615 PF00485 Phosphoribulokinase / Uridine kinase family EPJ55_RS03630 PF03466 LysR substrate binding domain EPJ55_RS03630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPJ55_RS03635 PF00890 FAD binding domain EPJ55_RS03635 PF14537 Cytochrome c3 EPJ55_RS03645 PF02525 Flavodoxin-like fold EPJ55_RS03650 PF00152 tRNA synthetases class II (D, K and N) EPJ55_RS03650 PF01336 OB-fold nucleic acid binding domain EPJ55_RS03655 PF03590 Aspartate-ammonia ligase EPJ55_RS03660 PF03577 Peptidase family C69 EPJ55_RS03680 PF16124 RecQ zinc-binding EPJ55_RS03680 PF00270 DEAD/DEAH box helicase EPJ55_RS03680 PF00271 Helicase conserved C-terminal domain EPJ55_RS03680 PF00570 HRDC domain EPJ55_RS03680 PF09382 RQC domain EPJ55_RS03685 PF00849 RNA pseudouridylate synthase EPJ55_RS03720 PF00106 short chain dehydrogenase EPJ55_RS03720 PF00300 Histidine phosphatase superfamily (branch 1) EPJ55_RS03730 PF07859 alpha/beta hydrolase fold EPJ55_RS03740 PF08245 Mur ligase middle domain EPJ55_RS03740 PF02875 Mur ligase family, glutamate ligase domain EPJ55_RS03740 PF01225 Mur ligase family, catalytic domain EPJ55_RS03745 PF00696 Amino acid kinase family EPJ55_RS03745 PF13840 ACT domain EPJ55_RS03750 PF13537 Glutamine amidotransferase domain EPJ55_RS03750 PF00733 Asparagine synthase EPJ55_RS03780 PF07690 Major Facilitator Superfamily EPJ55_RS03800 PF00313 'Cold-shock' DNA-binding domain EPJ55_RS03805 PF06738 Putative threonine/serine exporter EPJ55_RS03815 PF03816 Cell envelope-related transcriptional attenuator domain EPJ55_RS03835 PF02082 Transcriptional regulator EPJ55_RS03840 PF00205 Thiamine pyrophosphate enzyme, central domain EPJ55_RS03840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EPJ55_RS03840 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EPJ55_RS03845 PF00324 Amino acid permease EPJ55_RS03855 PF01712 Deoxynucleoside kinase EPJ55_RS03860 PF02403 Seryl-tRNA synthetase N-terminal domain EPJ55_RS03860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EPJ55_RS03900 PF05848 CtsR N-terminal HTH domain EPJ55_RS03900 PF17727 CtsR C-terminal dimerization domain EPJ55_RS03905 PF10431 C-terminal, D2-small domain, of ClpB protein EPJ55_RS03905 PF00004 ATPase family associated with various cellular activities (AAA) EPJ55_RS03905 PF02861 Clp amino terminal domain, pathogenicity island component EPJ55_RS03905 PF07724 AAA domain (Cdc48 subfamily) EPJ55_RS03905 PF17871 AAA lid domain EPJ55_RS03910 PF08360 QacR-like protein, C-terminal region EPJ55_RS03910 PF00440 Bacterial regulatory proteins, tetR family EPJ55_RS03920 PF04983 RNA polymerase Rpb1, domain 3 EPJ55_RS03920 PF04998 RNA polymerase Rpb1, domain 5 EPJ55_RS03920 PF04997 RNA polymerase Rpb1, domain 1 EPJ55_RS03920 PF00623 RNA polymerase Rpb1, domain 2 EPJ55_RS03920 PF05000 RNA polymerase Rpb1, domain 4 EPJ55_RS03925 PF01478 Type IV leader peptidase family EPJ55_RS03925 PF06750 Bacterial Peptidase A24 N-terminal domain EPJ55_RS03930 PF00164 Ribosomal protein S12/S23 EPJ55_RS03935 PF00177 Ribosomal protein S7p/S5e EPJ55_RS03940 PF14492 Elongation Factor G, domain II EPJ55_RS03940 PF03764 Elongation factor G, domain IV EPJ55_RS03940 PF00009 Elongation factor Tu GTP binding domain EPJ55_RS03940 PF03144 Elongation factor Tu domain 2 EPJ55_RS03940 PF00679 Elongation factor G C-terminus EPJ55_RS03945 PF00338 Ribosomal protein S10p/S20e EPJ55_RS03950 PF00297 Ribosomal protein L3 EPJ55_RS03955 PF00573 Ribosomal protein L4/L1 family EPJ55_RS03960 PF00276 Ribosomal protein L23 EPJ55_RS03965 PF00181 Ribosomal Proteins L2, RNA binding domain EPJ55_RS03965 PF03947 Ribosomal Proteins L2, C-terminal domain EPJ55_RS03970 PF00203 Ribosomal protein S19 EPJ55_RS03975 PF00237 Ribosomal protein L22p/L17e EPJ55_RS03980 PF07650 KH domain EPJ55_RS03980 PF00189 Ribosomal protein S3, C-terminal domain EPJ55_RS03985 PF00252 Ribosomal protein L16p/L10e EPJ55_RS03990 PF00831 Ribosomal L29 protein EPJ55_RS03995 PF00366 Ribosomal protein S17 EPJ55_RS04000 PF00238 Ribosomal protein L14p/L23e EPJ55_RS04005 PF00467 KOW motif EPJ55_RS04005 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 EPJ55_RS04010 PF00281 Ribosomal protein L5 EPJ55_RS04010 PF00673 ribosomal L5P family C-terminus EPJ55_RS04015 PF00253 Ribosomal protein S14p/S29e EPJ55_RS04020 PF00410 Ribosomal protein S8 EPJ55_RS04025 PF00347 Ribosomal protein L6 EPJ55_RS04030 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast EPJ55_RS04035 PF00333 Ribosomal protein S5, N-terminal domain EPJ55_RS04035 PF03719 Ribosomal protein S5, C-terminal domain EPJ55_RS04040 PF00327 Ribosomal protein L30p/L7e EPJ55_RS04045 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A EPJ55_RS04050 PF00344 SecY translocase EPJ55_RS04055 PF05191 Adenylate kinase, active site lid EPJ55_RS04060 PF01176 Translation initiation factor 1A / IF-1 EPJ55_RS04065 PF00444 Ribosomal protein L36 EPJ55_RS04070 PF00416 Ribosomal protein S13/S18 EPJ55_RS04075 PF00411 Ribosomal protein S11 EPJ55_RS04080 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain EPJ55_RS04080 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain EPJ55_RS04080 PF01000 RNA polymerase Rpb3/RpoA insert domain EPJ55_RS04085 PF01196 Ribosomal protein L17 EPJ55_RS04090 PF00348 Polyprenyl synthetase EPJ55_RS04110 PF04205 FMN-binding domain EPJ55_RS04115 PF02424 ApbE family EPJ55_RS04120 PF00005 ABC transporter EPJ55_RS04125 PF00005 ABC transporter EPJ55_RS04130 PF02361 Cobalt transport protein EPJ55_RS04135 PF01416 tRNA pseudouridine synthase EPJ55_RS04140 PF00572 Ribosomal protein L13 EPJ55_RS04145 PF00380 Ribosomal protein S9/S16 EPJ55_RS04150 PF02645 Uncharacterised protein, DegV family COG1307 EPJ55_RS04165 PF02780 Transketolase, C-terminal domain EPJ55_RS04165 PF02779 Transketolase, pyrimidine binding domain EPJ55_RS04165 PF00456 Transketolase, thiamine diphosphate binding domain EPJ55_RS04170 PF08501 Shikimate dehydrogenase substrate binding domain EPJ55_RS04170 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EPJ55_RS04175 PF00793 DAHP synthetase I family EPJ55_RS04175 PF18152 DAHP synthase ferredoxin-like domain EPJ55_RS04185 PF00939 Sodium:sulfate symporter transmembrane region EPJ55_RS04190 PF01883 Iron-sulfur cluster assembly protein EPJ55_RS04195 PF05683 Fumarase C-terminus EPJ55_RS04200 PF05681 Fumarate hydratase (Fumerase) EPJ55_RS04205 PF12833 Helix-turn-helix domain EPJ55_RS04205 PF02311 AraC-like ligand binding domain EPJ55_RS04210 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase EPJ55_RS04215 PF00005 ABC transporter EPJ55_RS04220 PF00950 ABC 3 transport family EPJ55_RS04225 PF01297 Zinc-uptake complex component A periplasmic EPJ55_RS04235 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EPJ55_RS04235 PF00056 lactate/malate dehydrogenase, NAD binding domain EPJ55_RS04240 PF00939 Sodium:sulfate symporter transmembrane region EPJ55_RS04250 PF03949 Malic enzyme, NAD binding domain EPJ55_RS04250 PF00390 Malic enzyme, N-terminal domain EPJ55_RS04255 PF08218 Citrate lyase ligase C-terminal domain EPJ55_RS04260 PF06857 Malonate decarboxylase delta subunit (MdcD) EPJ55_RS04265 PF03328 HpcH/HpaI aldolase/citrate lyase family EPJ55_RS04270 PF04223 Citrate lyase, alpha subunit (CitF) EPJ55_RS04280 PF00206 Lyase EPJ55_RS04280 PF10415 Fumarase C C-terminus EPJ55_RS04285 PF00890 FAD binding domain EPJ55_RS04285 PF14537 Cytochrome c3 EPJ55_RS04290 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase EPJ55_RS04290 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase EPJ55_RS04295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPJ55_RS04295 PF03466 LysR substrate binding domain EPJ55_RS04300 PF03466 LysR substrate binding domain EPJ55_RS04300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPJ55_RS04305 PF00390 Malic enzyme, N-terminal domain EPJ55_RS04305 PF03949 Malic enzyme, NAD binding domain EPJ55_RS04315 PF13520 Amino acid permease EPJ55_RS04320 PF12822 ECF transporter, substrate-specific component EPJ55_RS04335 PF01654 Cytochrome bd terminal oxidase subunit I EPJ55_RS04340 PF02322 Cytochrome bd terminal oxidase subunit II EPJ55_RS04345 PF00664 ABC transporter transmembrane region EPJ55_RS04345 PF00005 ABC transporter EPJ55_RS04350 PF00664 ABC transporter transmembrane region EPJ55_RS04350 PF00005 ABC transporter EPJ55_RS04360 PF00348 Polyprenyl synthetase EPJ55_RS04370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EPJ55_RS04370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EPJ55_RS04375 PF13457 GW (Gly-Tryp) dipeptide domain EPJ55_RS04375 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EPJ55_RS04385 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EPJ55_RS04390 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EPJ55_RS04390 PF02222 ATP-grasp domain EPJ55_RS04395 PF00580 UvrD/REP helicase N-terminal domain EPJ55_RS04395 PF13361 UvrD-like helicase C-terminal domain EPJ55_RS04400 PF03119 NAD-dependent DNA ligase C4 zinc finger domain EPJ55_RS04400 PF03120 NAD-dependent DNA ligase OB-fold domain EPJ55_RS04400 PF00533 BRCA1 C Terminus (BRCT) domain EPJ55_RS04400 PF12826 Helix-hairpin-helix motif EPJ55_RS04400 PF01653 NAD-dependent DNA ligase adenylation domain EPJ55_RS04405 PF07537 CamS sex pheromone cAM373 precursor EPJ55_RS04410 PF02686 Glu-tRNAGln amidotransferase C subunit EPJ55_RS04415 PF01425 Amidase EPJ55_RS04420 PF02637 GatB domain EPJ55_RS04420 PF02934 GatB/GatE catalytic domain EPJ55_RS04425 PF00781 Diacylglycerol kinase catalytic domain EPJ55_RS04430 PF01938 TRAM domain EPJ55_RS04430 PF05958 tRNA (Uracil-5-)-methyltransferase EPJ55_RS04445 PF02378 Phosphotransferase system, EIIC EPJ55_RS04455 PF01418 Helix-turn-helix domain, rpiR family EPJ55_RS04455 PF01380 SIS domain EPJ55_RS04470 PF00313 'Cold-shock' DNA-binding domain EPJ55_RS04475 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EPJ55_RS04475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EPJ55_RS04480 PF00270 DEAD/DEAH box helicase EPJ55_RS04480 PF00271 Helicase conserved C-terminal domain EPJ55_RS04495 PF02378 Phosphotransferase system, EIIC EPJ55_RS04520 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EPJ55_RS04520 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain EPJ55_RS04530 PF02350 UDP-N-acetylglucosamine 2-epimerase EPJ55_RS04540 PF00230 Major intrinsic protein EPJ55_RS04550 PF03275 UDP-galactopyranose mutase EPJ55_RS04580 PF00534 Glycosyl transferases group 1 EPJ55_RS04580 PF13439 Glycosyltransferase Family 4 EPJ55_RS04595 PF01943 Polysaccharide biosynthesis protein EPJ55_RS04595 PF14667 Polysaccharide biosynthesis C-terminal domain EPJ55_RS04600 PF01467 Cytidylyltransferase-like EPJ55_RS04610 PF16363 GDP-mannose 4,6 dehydratase EPJ55_RS04615 PF00589 Phage integrase family EPJ55_RS04625 PF13614 AAA domain EPJ55_RS04635 PF16363 GDP-mannose 4,6 dehydratase EPJ55_RS04640 PF02397 Bacterial sugar transferase EPJ55_RS04660 PF00535 Glycosyl transferase family 2 EPJ55_RS04665 PF04230 Polysaccharide pyruvyl transferase EPJ55_RS04755 PF03275 UDP-galactopyranose mutase EPJ55_RS04790 PF12833 Helix-turn-helix domain EPJ55_RS04795 PF00746 LPXTG cell wall anchor motif EPJ55_RS04810 PF02397 Bacterial sugar transferase EPJ55_RS04845 PF02631 RecX family EPJ55_RS04850 PF04167 Protein of unknown function (DUF402) EPJ55_RS04855 PF01476 LysM domain EPJ55_RS04855 PF08239 Bacterial SH3 domain EPJ55_RS04855 PF00877 NlpC/P60 family EPJ55_RS04870 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EPJ55_RS04870 PF00056 lactate/malate dehydrogenase, NAD binding domain EPJ55_RS04875 PF01594 AI-2E family transporter EPJ55_RS04880 PF01467 Cytidylyltransferase-like EPJ55_RS04885 PF02447 GntP family permease EPJ55_RS04890 PF00370 FGGY family of carbohydrate kinases, N-terminal domain EPJ55_RS04890 PF02782 FGGY family of carbohydrate kinases, C-terminal domain EPJ55_RS04895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EPJ55_RS04895 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EPJ55_RS04900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EPJ55_RS04900 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPJ55_RS04905 PF16658 Class II release factor RF3, C-terminal domain EPJ55_RS04905 PF03144 Elongation factor Tu domain 2 EPJ55_RS04905 PF00009 Elongation factor Tu GTP binding domain EPJ55_RS04920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPJ55_RS04920 PF03466 LysR substrate binding domain EPJ55_RS04935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle EPJ55_RS04940 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS04945 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS04945 PF12911 N-terminal TM domain of oligopeptide transport permease C EPJ55_RS04950 PF00005 ABC transporter EPJ55_RS04950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPJ55_RS04955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region EPJ55_RS04955 PF00005 ABC transporter EPJ55_RS04965 PF00589 Phage integrase family EPJ55_RS04970 PF00004 ATPase family associated with various cellular activities (AAA) EPJ55_RS04970 PF07724 AAA domain (Cdc48 subfamily) EPJ55_RS04970 PF17871 AAA lid domain EPJ55_RS04970 PF10431 C-terminal, D2-small domain, of ClpB protein EPJ55_RS04980 PF00381 PTS HPr component phosphorylation site EPJ55_RS04985 PF02896 PEP-utilising enzyme, TIM barrel domain EPJ55_RS04985 PF05524 PEP-utilising enzyme, N-terminal EPJ55_RS04985 PF00391 PEP-utilising enzyme, mobile domain EPJ55_RS04990 PF13439 Glycosyltransferase Family 4 EPJ55_RS04990 PF00534 Glycosyl transferases group 1 EPJ55_RS04995 PF13439 Glycosyltransferase Family 4 EPJ55_RS04995 PF00534 Glycosyl transferases group 1 EPJ55_RS05005 PF00768 D-alanyl-D-alanine carboxypeptidase EPJ55_RS05005 PF07943 Penicillin-binding protein 5, C-terminal domain EPJ55_RS05010 PF00155 Aminotransferase class I and II EPJ55_RS05015 PF08796 Protein of unknown function (DUF1797) EPJ55_RS05020 PF00884 Sulfatase EPJ55_RS05105 PF00156 Phosphoribosyl transferase domain EPJ55_RS05125 PF00149 Calcineurin-like phosphoesterase EPJ55_RS05130 PF00072 Response regulator receiver domain EPJ55_RS05130 PF12833 Helix-turn-helix domain EPJ55_RS05135 PF07859 alpha/beta hydrolase fold EPJ55_RS05145 PF00480 ROK family EPJ55_RS05150 PF01566 Natural resistance-associated macrophage protein EPJ55_RS05155 PF00762 Ferrochelatase EPJ55_RS05160 PF00324 Amino acid permease EPJ55_RS05165 PF02574 Homocysteine S-methyltransferase EPJ55_RS05170 PF00862 Sucrose synthase EPJ55_RS05170 PF00534 Glycosyl transferases group 1 EPJ55_RS05180 PF02773 S-adenosylmethionine synthetase, C-terminal domain EPJ55_RS05180 PF02772 S-adenosylmethionine synthetase, central domain EPJ55_RS05180 PF00438 S-adenosylmethionine synthetase, N-terminal domain EPJ55_RS05185 PF07690 Major Facilitator Superfamily EPJ55_RS05200 PF00534 Glycosyl transferases group 1 EPJ55_RS05200 PF00862 Sucrose synthase EPJ55_RS05205 PF00534 Glycosyl transferases group 1 EPJ55_RS05215 PF06962 Putative rRNA methylase EPJ55_RS05220 PF01569 PAP2 superfamily EPJ55_RS05225 PF08264 Anticodon-binding domain of tRNA EPJ55_RS05225 PF13603 Leucyl-tRNA synthetase, Domain 2 EPJ55_RS05225 PF00133 tRNA synthetases class I (I, L, M and V) EPJ55_RS05225 PF09334 tRNA synthetases class I (M) EPJ55_RS05230 PF14667 Polysaccharide biosynthesis C-terminal domain EPJ55_RS05230 PF01943 Polysaccharide biosynthesis protein EPJ55_RS05235 PF00849 RNA pseudouridylate synthase EPJ55_RS05235 PF01479 S4 domain EPJ55_RS05240 PF01256 Carbohydrate kinase EPJ55_RS05245 PF01546 Peptidase family M20/M25/M40 EPJ55_RS05255 PF00005 ABC transporter EPJ55_RS05255 PF17912 MalK OB fold domain EPJ55_RS05260 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS05265 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS05275 PF03009 Glycerophosphoryl diester phosphodiesterase family EPJ55_RS05280 PF01712 Deoxynucleoside kinase EPJ55_RS05285 PF01741 Large-conductance mechanosensitive channel, MscL EPJ55_RS05305 PF00005 ABC transporter EPJ55_RS05310 PF00072 Response regulator receiver domain EPJ55_RS05310 PF04397 LytTr DNA-binding domain EPJ55_RS05320 PF01625 Peptide methionine sulfoxide reductase EPJ55_RS05325 PF13411 MerR HTH family regulatory protein EPJ55_RS05335 PF00892 EamA-like transporter family EPJ55_RS05355 PF00072 Response regulator receiver domain EPJ55_RS05355 PF04397 LytTr DNA-binding domain EPJ55_RS05375 PF01047 MarR family EPJ55_RS05390 PF00005 ABC transporter EPJ55_RS05390 PF17760 UvrA interaction domain EPJ55_RS05390 PF17755 UvrA DNA-binding domain EPJ55_RS05420 PF07457 Protein of unknown function (DUF1516) EPJ55_RS05425 PF02219 Methylenetetrahydrofolate reductase EPJ55_RS05425 PF02574 Homocysteine S-methyltransferase EPJ55_RS05430 PF01717 Cobalamin-independent synthase, Catalytic domain EPJ55_RS05430 PF08267 Cobalamin-independent synthase, N-terminal domain EPJ55_RS05440 PF01747 ATP-sulfurylase EPJ55_RS05440 PF14306 PUA-like domain EPJ55_RS05450 PF02272 DHHA1 domain EPJ55_RS05450 PF01368 DHH family EPJ55_RS05460 PF03600 Citrate transporter EPJ55_RS05460 PF02080 TrkA-C domain EPJ55_RS05465 PF01554 MatE EPJ55_RS05485 PF13673 Acetyltransferase (GNAT) domain EPJ55_RS05490 PF05746 DALR anticodon binding domain EPJ55_RS05490 PF03485 Arginyl tRNA synthetase N terminal domain EPJ55_RS05490 PF00750 tRNA synthetases class I (R) EPJ55_RS05500 PF12704 MacB-like periplasmic core domain EPJ55_RS05500 PF00005 ABC transporter EPJ55_RS05500 PF02687 FtsX-like permease family EPJ55_RS05515 PF03734 L,D-transpeptidase catalytic domain EPJ55_RS05520 PF00550 Phosphopantetheine attachment site EPJ55_RS05525 PF00155 Aminotransferase class I and II EPJ55_RS05525 PF00392 Bacterial regulatory proteins, gntR family EPJ55_RS05535 PF00155 Aminotransferase class I and II EPJ55_RS05540 PF01316 Arginine repressor, DNA binding domain EPJ55_RS05540 PF02863 Arginine repressor, C-terminal domain EPJ55_RS05545 PF00912 Transglycosylase EPJ55_RS05545 PF00905 Penicillin binding protein transpeptidase domain EPJ55_RS05550 PF06133 Control of competence regulator ComK, YlbF/YmcA EPJ55_RS05555 PF00149 Calcineurin-like phosphoesterase EPJ55_RS05560 PF13514 AAA domain EPJ55_RS05565 PF01966 HD domain EPJ55_RS05580 PF03466 LysR substrate binding domain EPJ55_RS05580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPJ55_RS05585 PF04205 FMN-binding domain EPJ55_RS05585 PF03358 NADPH-dependent FMN reductase EPJ55_RS05585 PF00890 FAD binding domain EPJ55_RS05590 PF00890 FAD binding domain EPJ55_RS05590 PF03358 NADPH-dependent FMN reductase EPJ55_RS05590 PF04205 FMN-binding domain EPJ55_RS05610 PF00535 Glycosyl transferase family 2 EPJ55_RS05630 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EPJ55_RS05630 PF01872 RibD C-terminal domain EPJ55_RS05635 PF00677 Lumazine binding domain EPJ55_RS05640 PF00925 GTP cyclohydrolase II EPJ55_RS05640 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase EPJ55_RS05645 PF00885 6,7-dimethyl-8-ribityllumazine synthase EPJ55_RS05670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EPJ55_RS05670 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPJ55_RS05700 PF00639 PPIC-type PPIASE domain EPJ55_RS05710 PF01230 HIT domain EPJ55_RS05715 PF00005 ABC transporter EPJ55_RS05720 PF05975 Bacterial ABC transporter protein EcsB EPJ55_RS05725 PF01636 Phosphotransferase enzyme family EPJ55_RS05730 PF02390 Putative methyltransferase EPJ55_RS05740 PF01588 Putative tRNA binding domain EPJ55_RS05740 PF14794 Domain of unknown function (DUF4479) EPJ55_RS05745 PF01580 FtsK/SpoIIIE family EPJ55_RS05745 PF09397 Ftsk gamma domain EPJ55_RS05745 PF17854 FtsK alpha domain EPJ55_RS05750 PF01225 Mur ligase family, catalytic domain EPJ55_RS05750 PF02875 Mur ligase family, glutamate ligase domain EPJ55_RS05750 PF08245 Mur ligase middle domain EPJ55_RS05760 PF02421 Ferrous iron transport protein B EPJ55_RS05760 PF07670 Nucleoside recognition EPJ55_RS05760 PF17910 FeoB cytosolic helical domain EPJ55_RS05760 PF07664 Ferrous iron transport protein B C terminus EPJ55_RS05770 PF00005 ABC transporter EPJ55_RS05775 PF01458 Uncharacterized protein family (UPF0051) EPJ55_RS05780 PF00266 Aminotransferase class-V EPJ55_RS05785 PF01592 NifU-like N terminal domain EPJ55_RS05790 PF01458 Uncharacterized protein family (UPF0051) EPJ55_RS05800 PF00005 ABC transporter EPJ55_RS05805 PF01032 FecCD transport family EPJ55_RS05810 PF00258 Flavodoxin EPJ55_RS05815 PF02391 MoaE protein EPJ55_RS05825 PF04055 Radical SAM superfamily EPJ55_RS05825 PF06463 Molybdenum Cofactor Synthesis C EPJ55_RS05830 PF07690 Major Facilitator Superfamily EPJ55_RS05835 PF01883 Iron-sulfur cluster assembly protein EPJ55_RS05865 PF07730 Histidine kinase EPJ55_RS05865 PF17200 Single Cache domain 2 EPJ55_RS05885 PF12804 MobA-like NTP transferase domain EPJ55_RS05890 PF01967 MoaC family EPJ55_RS05895 PF03205 Molybdopterin guanine dinucleotide synthesis protein B EPJ55_RS05900 PF03454 MoeA C-terminal region (domain IV) EPJ55_RS05900 PF00994 Probable molybdopterin binding domain EPJ55_RS05900 PF03453 MoeA N-terminal region (domain I and II) EPJ55_RS05905 PF00994 Probable molybdopterin binding domain EPJ55_RS05910 PF00899 ThiF family EPJ55_RS05915 PF00384 Molybdopterin oxidoreductase EPJ55_RS05915 PF14710 Respiratory nitrate reductase alpha N-terminal EPJ55_RS05915 PF01568 Molydopterin dinucleotide binding domain EPJ55_RS05920 PF13247 4Fe-4S dicluster domain EPJ55_RS05920 PF14711 Respiratory nitrate reductase beta C-terminal EPJ55_RS05930 PF02665 Nitrate reductase gamma subunit EPJ55_RS05950 PF13443 Cro/C1-type HTH DNA-binding domain EPJ55_RS05955 PF01027 Inhibitor of apoptosis-promoting Bax1 EPJ55_RS05960 PF01367 5'-3' exonuclease, C-terminal SAM fold EPJ55_RS05960 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain EPJ55_RS05960 PF00476 DNA polymerase family A EPJ55_RS05965 PF06827 Zinc finger found in FPG and IleRS EPJ55_RS05965 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain EPJ55_RS05965 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain EPJ55_RS05970 PF01121 Dephospho-CoA kinase EPJ55_RS05975 PF03477 ATP cone domain EPJ55_RS05980 PF07261 Replication initiation and membrane attachment EPJ55_RS05985 PF01695 IstB-like ATP binding protein EPJ55_RS05985 PF07319 Primosomal protein DnaI N-terminus EPJ55_RS05990 PF02824 TGS domain EPJ55_RS05990 PF03129 Anticodon binding domain EPJ55_RS05990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EPJ55_RS05990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EPJ55_RS05995 PF05198 Translation initiation factor IF-3, N-terminal domain EPJ55_RS05995 PF00707 Translation initiation factor IF-3, C-terminal domain EPJ55_RS06000 PF01632 Ribosomal protein L35 EPJ55_RS06005 PF00453 Ribosomal protein L20 EPJ55_RS06015 PF05496 Holliday junction DNA helicase RuvB P-loop domain EPJ55_RS06015 PF12002 MgsA AAA+ ATPase C terminal EPJ55_RS06015 PF16193 AAA C-terminal domain EPJ55_RS06020 PF08240 Alcohol dehydrogenase GroES-like domain EPJ55_RS06020 PF00107 Zinc-binding dehydrogenase EPJ55_RS06025 PF01638 HxlR-like helix-turn-helix EPJ55_RS06030 PF01177 Asp/Glu/Hydantoin racemase EPJ55_RS06035 PF00535 Glycosyl transferase family 2 EPJ55_RS06055 PF01926 50S ribosome-binding GTPase EPJ55_RS06060 PF01985 CRS1 / YhbY (CRM) domain EPJ55_RS06065 PF01467 Cytidylyltransferase-like EPJ55_RS06070 PF01966 HD domain EPJ55_RS06080 PF13649 Methyltransferase domain EPJ55_RS06085 PF05636 HIGH Nucleotidyl Transferase EPJ55_RS06095 PF01783 Ribosomal L32p protein family EPJ55_RS06110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EPJ55_RS06110 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain EPJ55_RS06115 PF00004 ATPase family associated with various cellular activities (AAA) EPJ55_RS06115 PF16193 AAA C-terminal domain EPJ55_RS06115 PF12002 MgsA AAA+ ATPase C terminal EPJ55_RS06120 PF00072 Response regulator receiver domain EPJ55_RS06120 PF00486 Transcriptional regulatory protein, C terminal EPJ55_RS06125 PF00512 His Kinase A (phospho-acceptor) domain EPJ55_RS06125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPJ55_RS06125 PF18719 ArlS sensor domain EPJ55_RS06135 PF13476 AAA domain EPJ55_RS06140 PF12320 Type 5 capsule protein repressor C-terminal domain EPJ55_RS06140 PF00149 Calcineurin-like phosphoesterase EPJ55_RS06155 PF00708 Acylphosphatase EPJ55_RS06160 PF00588 SpoU rRNA Methylase family EPJ55_RS06160 PF08032 RNA 2'-O ribose methyltransferase substrate binding EPJ55_RS06170 PF01638 HxlR-like helix-turn-helix EPJ55_RS06175 PF01409 tRNA synthetases class II core domain (F) EPJ55_RS06175 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain EPJ55_RS06180 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain EPJ55_RS06180 PF01588 Putative tRNA binding domain EPJ55_RS06180 PF03147 Ferredoxin-fold anticodon binding domain EPJ55_RS06180 PF03484 tRNA synthetase B5 domain EPJ55_RS06180 PF03483 B3/4 domain EPJ55_RS06185 PF02618 YceG-like family EPJ55_RS06190 PF00485 Phosphoribulokinase / Uridine kinase family EPJ55_RS06195 PF01272 Transcription elongation factor, GreA/GreB, C-term EPJ55_RS06195 PF03449 Transcription elongation factor, N-terminal EPJ55_RS06210 PF01521 Iron-sulphur cluster biosynthesis EPJ55_RS06220 PF00905 Penicillin binding protein transpeptidase domain EPJ55_RS06220 PF03717 Penicillin-binding Protein dimerisation domain EPJ55_RS06225 PF00471 Ribosomal protein L33 EPJ55_RS06230 PF01812 5-formyltetrahydrofolate cyclo-ligase family EPJ55_RS06235 PF01694 Rhomboid family EPJ55_RS06245 PF00480 ROK family EPJ55_RS06265 PF03009 Glycerophosphoryl diester phosphodiesterase family EPJ55_RS06275 PF13411 MerR HTH family regulatory protein EPJ55_RS06325 PF00829 Ribosomal prokaryotic L21 protein EPJ55_RS06335 PF01016 Ribosomal L27 protein EPJ55_RS06340 PF01321 Creatinase/Prolidase N-terminal domain EPJ55_RS06340 PF00557 Metallopeptidase family M24 EPJ55_RS06345 PF01132 Elongation factor P (EF-P) OB domain EPJ55_RS06345 PF08207 Elongation factor P (EF-P) KOW-like domain EPJ55_RS06345 PF09285 Elongation factor P, C-terminal EPJ55_RS06350 PF03780 Asp23 family, cell envelope-related function EPJ55_RS06355 PF01029 NusB family EPJ55_RS06360 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain EPJ55_RS06360 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain EPJ55_RS06365 PF13742 OB-fold nucleic acid binding domain EPJ55_RS06365 PF02601 Exonuclease VII, large subunit EPJ55_RS06370 PF02609 Exonuclease VII small subunit EPJ55_RS06375 PF00348 Polyprenyl synthetase EPJ55_RS06380 PF01728 FtsJ-like methyltransferase EPJ55_RS06380 PF01479 S4 domain EPJ55_RS06385 PF01316 Arginine repressor, DNA binding domain EPJ55_RS06385 PF02863 Arginine repressor, C-terminal domain EPJ55_RS06390 PF13476 AAA domain EPJ55_RS06395 PF00571 CBS domain EPJ55_RS06395 PF00005 ABC transporter EPJ55_RS06400 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS06405 PF04069 Substrate binding domain of ABC-type glycine betaine transport system EPJ55_RS06410 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS06420 PF00625 Guanylate kinase EPJ55_RS06425 PF01192 RNA polymerase Rpb6 EPJ55_RS06430 PF02441 Flavoprotein EPJ55_RS06430 PF04127 DNA / pantothenate metabolism flavoprotein EPJ55_RS06435 PF00271 Helicase conserved C-terminal domain EPJ55_RS06435 PF04851 Type III restriction enzyme, res subunit EPJ55_RS06435 PF18319 PriA DNA helicase Cys-rich region (CRR) domain EPJ55_RS06435 PF17764 3′ DNA-binding domain (3′BD) EPJ55_RS06435 PF18074 Primosomal protein N C-terminal domain EPJ55_RS06440 PF02911 Formyl transferase, C-terminal domain EPJ55_RS06440 PF00551 Formyl transferase EPJ55_RS06445 PF01189 16S rRNA methyltransferase RsmB/F EPJ55_RS06445 PF01029 NusB family EPJ55_RS06455 PF03793 PASTA domain EPJ55_RS06455 PF00069 Protein kinase domain EPJ55_RS06460 PF16745 RsgA N-terminal domain EPJ55_RS06460 PF03193 RsgA GTPase EPJ55_RS06465 PF00834 Ribulose-phosphate 3 epimerase family EPJ55_RS06470 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain EPJ55_RS06470 PF04263 Thiamin pyrophosphokinase, catalytic domain EPJ55_RS06480 PF00830 Ribosomal L28 family EPJ55_RS06485 PF03780 Asp23 family, cell envelope-related function EPJ55_RS06490 PF02734 DAK2 domain EPJ55_RS06490 PF13684 Dihydroxyacetone kinase family EPJ55_RS06495 PF00271 Helicase conserved C-terminal domain EPJ55_RS06495 PF17191 RecG wedge domain EPJ55_RS06495 PF00270 DEAD/DEAH box helicase EPJ55_RS06500 PF02504 Fatty acid synthesis protein EPJ55_RS06505 PF00550 Phosphopantetheine attachment site EPJ55_RS06510 PF14622 Ribonuclease-III-like EPJ55_RS06510 PF00035 Double-stranded RNA binding motif EPJ55_RS06515 PF06470 SMC proteins Flexible Hinge Domain EPJ55_RS06515 PF02463 RecF/RecN/SMC N terminal domain EPJ55_RS06520 PF02881 SRP54-type protein, helical bundle domain EPJ55_RS06520 PF00448 SRP54-type protein, GTPase domain EPJ55_RS06525 PF04297 Putative helix-turn-helix protein, YlxM / p13 like EPJ55_RS06530 PF00448 SRP54-type protein, GTPase domain EPJ55_RS06530 PF02881 SRP54-type protein, helical bundle domain EPJ55_RS06530 PF02978 Signal peptide binding domain EPJ55_RS06535 PF00886 Ribosomal protein S16 EPJ55_RS06545 PF05239 PRC-barrel domain EPJ55_RS06545 PF01782 RimM N-terminal domain EPJ55_RS06550 PF01746 tRNA (Guanine-1)-methyltransferase EPJ55_RS06555 PF01245 Ribosomal protein L19 EPJ55_RS06575 PF00005 ABC transporter EPJ55_RS06585 PF04715 Anthranilate synthase component I, N terminal region EPJ55_RS06585 PF00425 chorismate binding enzyme EPJ55_RS06590 PF00117 Glutamine amidotransferase class-I EPJ55_RS06590 PF02885 Glycosyl transferase family, helical bundle domain EPJ55_RS06590 PF00591 Glycosyl transferase family, a/b domain EPJ55_RS06595 PF00591 Glycosyl transferase family, a/b domain EPJ55_RS06595 PF02885 Glycosyl transferase family, helical bundle domain EPJ55_RS06600 PF00218 Indole-3-glycerol phosphate synthase EPJ55_RS06605 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase EPJ55_RS06610 PF00291 Pyridoxal-phosphate dependent enzyme EPJ55_RS06615 PF00290 Tryptophan synthase alpha chain EPJ55_RS06640 PF01546 Peptidase family M20/M25/M40 EPJ55_RS06640 PF07687 Peptidase dimerisation domain EPJ55_RS06645 PF08240 Alcohol dehydrogenase GroES-like domain EPJ55_RS06645 PF00107 Zinc-binding dehydrogenase EPJ55_RS06655 PF00106 short chain dehydrogenase EPJ55_RS06665 PF07977 FabA-like domain EPJ55_RS06670 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EPJ55_RS06670 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal EPJ55_RS06675 PF00550 Phosphopantetheine attachment site EPJ55_RS06680 PF00698 Acyl transferase domain EPJ55_RS06690 PF02801 Beta-ketoacyl synthase, C-terminal domain EPJ55_RS06690 PF00109 Beta-ketoacyl synthase, N-terminal domain EPJ55_RS06695 PF00364 Biotin-requiring enzyme EPJ55_RS06700 PF07977 FabA-like domain EPJ55_RS06705 PF00289 Biotin carboxylase, N-terminal domain EPJ55_RS06705 PF02785 Biotin carboxylase C-terminal domain EPJ55_RS06705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EPJ55_RS06710 PF01039 Carboxyl transferase domain EPJ55_RS06715 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit EPJ55_RS06730 PF04474 Protein of unknown function (DUF554) EPJ55_RS06735 PF03466 LysR substrate binding domain EPJ55_RS06735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPJ55_RS06740 PF03061 Thioesterase superfamily EPJ55_RS06745 PF03193 RsgA GTPase EPJ55_RS06755 PF07690 Major Facilitator Superfamily EPJ55_RS06780 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading EPJ55_RS06785 PF03992 Antibiotic biosynthesis monooxygenase EPJ55_RS06795 PF03073 TspO/MBR family EPJ55_RS06805 PF05656 Protein of unknown function (DUF805) EPJ55_RS06810 PF00781 Diacylglycerol kinase catalytic domain EPJ55_RS06820 PF04226 Transglycosylase associated protein EPJ55_RS06825 PF05532 CsbD-like EPJ55_RS06835 PF03577 Peptidase family C69 EPJ55_RS06840 PF01361 Tautomerase enzyme EPJ55_RS06845 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain EPJ55_RS06845 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain EPJ55_RS06870 PF00202 Aminotransferase class-III EPJ55_RS06875 PF13520 Amino acid permease EPJ55_RS06885 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF EPJ55_RS06885 PF17126 RsmF rRNA methyltransferase first C-terminal domain EPJ55_RS06885 PF01189 16S rRNA methyltransferase RsmB/F EPJ55_RS06900 PF03636 Glycosyl hydrolase family 65, N-terminal domain EPJ55_RS06900 PF03632 Glycosyl hydrolase family 65 central catalytic domain EPJ55_RS06900 PF03633 Glycosyl hydrolase family 65, C-terminal domain EPJ55_RS06905 PF01263 Aldose 1-epimerase EPJ55_RS06910 PF01070 FMN-dependent dehydrogenase EPJ55_RS06915 PF00288 GHMP kinases N terminal domain EPJ55_RS06915 PF08544 GHMP kinases C terminal EPJ55_RS06925 PF00288 GHMP kinases N terminal domain EPJ55_RS06930 PF13307 Helicase C-terminal domain EPJ55_RS06930 PF04851 Type III restriction enzyme, res subunit EPJ55_RS06930 PF00929 Exonuclease EPJ55_RS06940 PF00155 Aminotransferase class I and II EPJ55_RS06945 PF01336 OB-fold nucleic acid binding domain EPJ55_RS06945 PF00152 tRNA synthetases class II (D, K and N) EPJ55_RS06960 PF00005 ABC transporter EPJ55_RS06960 PF09383 NIL domain EPJ55_RS06965 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS06970 PF03180 NLPA lipoprotein EPJ55_RS06985 PF01547 Bacterial extracellular solute-binding protein EPJ55_RS06995 PF00912 Transglycosylase EPJ55_RS06995 PF00905 Penicillin binding protein transpeptidase domain EPJ55_RS07000 PF03838 Recombination protein U EPJ55_RS07005 PF06908 YspA SLOG family EPJ55_RS07010 PF05103 DivIVA protein EPJ55_RS07020 PF02926 THUMP domain EPJ55_RS07020 PF01170 Putative RNA methylase family UPF0020 EPJ55_RS07025 PF00326 Prolyl oligopeptidase family EPJ55_RS07035 PF00535 Glycosyl transferase family 2 EPJ55_RS07055 PF02016 LD-carboxypeptidase N-terminal domain EPJ55_RS07055 PF17676 LD-carboxypeptidase C-terminal domain EPJ55_RS07065 PF00005 ABC transporter EPJ55_RS07085 PF01266 FAD dependent oxidoreductase EPJ55_RS07100 PF01268 Formate--tetrahydrofolate ligase EPJ55_RS07105 PF01252 Signal peptidase (SPase) II EPJ55_RS07110 PF00849 RNA pseudouridylate synthase EPJ55_RS07110 PF01479 S4 domain EPJ55_RS07115 PF00156 Phosphoribosyl transferase domain EPJ55_RS07120 PF00117 Glutamine amidotransferase class-I EPJ55_RS07120 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EPJ55_RS07125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EPJ55_RS07125 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EPJ55_RS07125 PF02142 MGS-like domain EPJ55_RS07130 PF00300 Histidine phosphatase superfamily (branch 1) EPJ55_RS07135 PF08818 Domain of unknown function (DU1801) EPJ55_RS07160 PF00005 ABC transporter EPJ55_RS07165 PF12679 ABC-2 family transporter protein EPJ55_RS07170 PF05670 NFACT protein RNA binding domain EPJ55_RS07180 PF02645 Uncharacterised protein, DegV family COG1307 EPJ55_RS07235 PF00324 Amino acid permease EPJ55_RS07250 PF02652 L-lactate permease EPJ55_RS07260 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase EPJ55_RS07265 PF08240 Alcohol dehydrogenase GroES-like domain EPJ55_RS07265 PF16912 Glucose dehydrogenase C-terminus EPJ55_RS07270 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase EPJ55_RS07275 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase EPJ55_RS07280 PF13673 Acetyltransferase (GNAT) domain EPJ55_RS07285 PF01047 MarR family EPJ55_RS07290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EPJ55_RS07290 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPJ55_RS07320 PF01625 Peptide methionine sulfoxide reductase EPJ55_RS07325 PF01641 SelR domain EPJ55_RS07330 PF01368 DHH family EPJ55_RS07330 PF02833 DHHA2 domain EPJ55_RS07335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPJ55_RS07335 PF03466 LysR substrate binding domain EPJ55_RS07340 PF00521 DNA gyrase/topoisomerase IV, subunit A EPJ55_RS07340 PF03989 DNA gyrase C-terminal domain, beta-propeller EPJ55_RS07345 PF01751 Toprim domain EPJ55_RS07345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPJ55_RS07345 PF00986 DNA gyrase B subunit, carboxyl terminus EPJ55_RS07345 PF00204 DNA gyrase B EPJ55_RS07350 PF02660 Glycerol-3-phosphate acyltransferase EPJ55_RS07355 PF01263 Aldose 1-epimerase EPJ55_RS07360 PF07724 AAA domain (Cdc48 subfamily) EPJ55_RS07360 PF10431 C-terminal, D2-small domain, of ClpB protein EPJ55_RS07360 PF00004 ATPase family associated with various cellular activities (AAA) EPJ55_RS07365 PF00227 Proteasome subunit EPJ55_RS07370 PF00589 Phage integrase family EPJ55_RS07370 PF02899 Phage integrase, N-terminal SAM-like domain EPJ55_RS07375 PF01134 Glucose inhibited division protein A EPJ55_RS07380 PF01131 DNA topoisomerase EPJ55_RS07380 PF01751 Toprim domain EPJ55_RS07380 PF01396 Topoisomerase DNA binding C4 zinc finger EPJ55_RS07385 PF02481 DNA recombination-mediator protein A EPJ55_RS07385 PF18255 DNA processing protein A sterile alpha motif domain EPJ55_RS07390 PF01351 Ribonuclease HII EPJ55_RS07395 PF01926 50S ribosome-binding GTPase EPJ55_RS07400 PF01717 Cobalamin-independent synthase, Catalytic domain EPJ55_RS07405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPJ55_RS07405 PF03466 LysR substrate binding domain EPJ55_RS07425 PF07690 Major Facilitator Superfamily EPJ55_RS07430 PF01471 Putative peptidoglycan binding domain EPJ55_RS07430 PF03572 Peptidase family S41 EPJ55_RS07430 PF17820 PDZ domain EPJ55_RS07435 PF06855 YozE SAM-like fold EPJ55_RS07440 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) EPJ55_RS07445 PF13472 GDSL-like Lipase/Acylhydrolase family EPJ55_RS07450 PF02645 Uncharacterised protein, DegV family COG1307 EPJ55_RS07455 PF00186 Dihydrofolate reductase EPJ55_RS07460 PF00303 Thymidylate synthase EPJ55_RS07465 PF00005 ABC transporter EPJ55_RS07465 PF12848 ABC transporter EPJ55_RS07465 PF16326 ABC transporter C-terminal domain EPJ55_RS07475 PF12627 Probable RNA and SrmB- binding site of polymerase A EPJ55_RS07475 PF13735 tRNA nucleotidyltransferase domain 2 putative EPJ55_RS07475 PF01743 Poly A polymerase head domain EPJ55_RS07480 PF05173 Dihydrodipicolinate reductase, C-terminus EPJ55_RS07480 PF01113 Dihydrodipicolinate reductase, N-terminus EPJ55_RS07495 PF00216 Bacterial DNA-binding protein EPJ55_RS07500 PF01926 50S ribosome-binding GTPase EPJ55_RS07500 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal EPJ55_RS07505 PF00575 S1 RNA binding domain EPJ55_RS07520 PF00271 Helicase conserved C-terminal domain EPJ55_RS07520 PF00270 DEAD/DEAH box helicase EPJ55_RS07530 PF12822 ECF transporter, substrate-specific component EPJ55_RS07535 PF00849 RNA pseudouridylate synthase EPJ55_RS07535 PF01479 S4 domain EPJ55_RS07540 PF04079 Segregation and condensation complex subunit ScpB EPJ55_RS07545 PF02616 Segregation and condensation protein ScpA EPJ55_RS07550 PF00583 Acetyltransferase (GNAT) family EPJ55_RS07555 PF00589 Phage integrase family EPJ55_RS07555 PF02899 Phage integrase, N-terminal SAM-like domain EPJ55_RS07560 PF17783 CvfB-like winged helix domain EPJ55_RS07560 PF13509 S1 domain EPJ55_RS07565 PF04284 Protein of unknown function (DUF441) EPJ55_RS07570 PF00224 Pyruvate kinase, barrel domain EPJ55_RS07570 PF00391 PEP-utilising enzyme, mobile domain EPJ55_RS07570 PF02887 Pyruvate kinase, alpha/beta domain EPJ55_RS07575 PF00365 Phosphofructokinase EPJ55_RS07580 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EPJ55_RS07580 PF07733 Bacterial DNA polymerase III alpha NTPase domain EPJ55_RS07580 PF14579 Helix-hairpin-helix motif EPJ55_RS07580 PF02811 PHP domain EPJ55_RS07580 PF01336 OB-fold nucleic acid binding domain EPJ55_RS07595 PF17871 AAA lid domain EPJ55_RS07595 PF00004 ATPase family associated with various cellular activities (AAA) EPJ55_RS07595 PF07724 AAA domain (Cdc48 subfamily) EPJ55_RS07595 PF02861 Clp amino terminal domain, pathogenicity island component EPJ55_RS07595 PF10431 C-terminal, D2-small domain, of ClpB protein EPJ55_RS07600 PF01546 Peptidase family M20/M25/M40 EPJ55_RS07600 PF07687 Peptidase dimerisation domain EPJ55_RS07605 PF01784 NIF3 (NGG1p interacting factor 3) EPJ55_RS07610 PF04816 tRNA (adenine(22)-N(1))-methyltransferase EPJ55_RS07620 PF01061 ABC-2 type transporter EPJ55_RS07625 PF13732 Domain of unknown function (DUF4162) EPJ55_RS07625 PF00005 ABC transporter EPJ55_RS07635 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain EPJ55_RS07635 PF02896 PEP-utilising enzyme, TIM barrel domain EPJ55_RS07635 PF00391 PEP-utilising enzyme, mobile domain EPJ55_RS07645 PF01047 MarR family EPJ55_RS07665 PF00403 Heavy-metal-associated domain EPJ55_RS07670 PF00113 Enolase, C-terminal TIM barrel domain EPJ55_RS07670 PF03952 Enolase, N-terminal domain EPJ55_RS07685 PF01546 Peptidase family M20/M25/M40 EPJ55_RS07685 PF07687 Peptidase dimerisation domain EPJ55_RS07695 PF00455 DeoR C terminal sensor domain EPJ55_RS07695 PF08220 DeoR-like helix-turn-helix domain EPJ55_RS07705 PF03960 ArsC family EPJ55_RS07750 PF13419 Haloacid dehalogenase-like hydrolase EPJ55_RS07755 PF00132 Bacterial transferase hexapeptide (six repeats) EPJ55_RS07755 PF14602 Hexapeptide repeat of succinyl-transferase EPJ55_RS07755 PF12464 Maltose acetyltransferase EPJ55_RS07760 PF01380 SIS domain EPJ55_RS07760 PF01418 Helix-turn-helix domain, rpiR family EPJ55_RS07780 PF03466 LysR substrate binding domain EPJ55_RS07780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPJ55_RS07785 PF00107 Zinc-binding dehydrogenase EPJ55_RS07785 PF08240 Alcohol dehydrogenase GroES-like domain EPJ55_RS07795 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPJ55_RS07795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EPJ55_RS07800 PF00072 Response regulator receiver domain EPJ55_RS07800 PF00196 Bacterial regulatory proteins, luxR family EPJ55_RS07805 PF07730 Histidine kinase EPJ55_RS07815 PF00005 ABC transporter EPJ55_RS07825 PF03352 Methyladenine glycosylase EPJ55_RS07825 PF13302 Acetyltransferase (GNAT) domain EPJ55_RS07825 PF00117 Glutamine amidotransferase class-I EPJ55_RS07825 PF00958 GMP synthase C terminal domain EPJ55_RS07825 PF13673 Acetyltransferase (GNAT) domain EPJ55_RS07855 PF00005 ABC transporter EPJ55_RS07875 PF00005 ABC transporter EPJ55_RS07880 PF00392 Bacterial regulatory proteins, gntR family EPJ55_RS07885 PF03979 Sigma-70 factor, region 1.1 EPJ55_RS07885 PF00140 Sigma-70 factor, region 1.2 EPJ55_RS07885 PF04542 Sigma-70 region 2 EPJ55_RS07885 PF04539 Sigma-70 region 3 EPJ55_RS07885 PF04545 Sigma-70, region 4 EPJ55_RS07890 PF10410 DnaB-helicase binding domain of primase EPJ55_RS07890 PF01807 CHC2 zinc finger EPJ55_RS07890 PF08275 DNA primase catalytic core, N-terminal domain EPJ55_RS07895 PF02092 Glycyl-tRNA synthetase beta subunit EPJ55_RS07900 PF02091 Glycyl-tRNA synthetase alpha subunit EPJ55_RS07905 PF02565 Recombination protein O C terminal EPJ55_RS07905 PF11967 Recombination protein O N terminal EPJ55_RS07910 PF07650 KH domain EPJ55_RS07910 PF01926 50S ribosome-binding GTPase EPJ55_RS07915 PF01219 Prokaryotic diacylglycerol kinase EPJ55_RS07920 PF02130 Uncharacterized protein family UPF0054 EPJ55_RS07925 PF02562 PhoH-like protein EPJ55_RS07930 PF09424 Yqey-like protein EPJ55_RS07935 PF01165 Ribosomal protein S21 EPJ55_RS07940 PF03618 Kinase/pyrophosphorylase EPJ55_RS07950 PF01261 Xylose isomerase-like TIM barrel EPJ55_RS07955 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase EPJ55_RS07960 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) EPJ55_RS07960 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 EPJ55_RS07965 PF01625 Peptide methionine sulfoxide reductase EPJ55_RS07970 PF01336 OB-fold nucleic acid binding domain EPJ55_RS07970 PF00152 tRNA synthetases class II (D, K and N) EPJ55_RS07970 PF02938 GAD domain EPJ55_RS07975 PF03129 Anticodon binding domain EPJ55_RS07975 PF13393 Histidyl-tRNA synthetase EPJ55_RS07980 PF01520 N-acetylmuramoyl-L-alanine amidase EPJ55_RS07980 PF08239 Bacterial SH3 domain EPJ55_RS07985 PF03881 Fructosamine kinase EPJ55_RS07990 PF13419 Haloacid dehalogenase-like hydrolase EPJ55_RS07995 PF02580 D-Tyr-tRNA(Tyr) deacylase EPJ55_RS08000 PF13291 ACT domain EPJ55_RS08000 PF02824 TGS domain EPJ55_RS08000 PF04607 Region found in RelA / SpoT proteins EPJ55_RS08010 PF04452 RNA methyltransferase EPJ55_RS08020 PF02245 Methylpurine-DNA glycosylase (MPG) EPJ55_RS08045 PF06421 GTP-binding protein LepA C-terminus EPJ55_RS08045 PF03144 Elongation factor Tu domain 2 EPJ55_RS08045 PF00009 Elongation factor Tu GTP binding domain EPJ55_RS08045 PF00679 Elongation factor G C-terminus EPJ55_RS08050 PF04914 DltD protein EPJ55_RS08055 PF00550 Phosphopantetheine attachment site EPJ55_RS08060 PF03062 MBOAT, membrane-bound O-acyltransferase family EPJ55_RS08065 PF00501 AMP-binding enzyme EPJ55_RS08065 PF13193 AMP-binding enzyme C-terminal domain EPJ55_RS08075 PF11954 Domain of unknown function (DUF3471) EPJ55_RS08075 PF00144 Beta-lactamase EPJ55_RS08080 PF00684 DnaJ central domain EPJ55_RS08080 PF01556 DnaJ C terminal domain EPJ55_RS08080 PF00226 DnaJ domain EPJ55_RS08085 PF00012 Hsp70 protein EPJ55_RS08090 PF01025 GrpE EPJ55_RS08095 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding EPJ55_RS08095 PF01628 HrcA protein C terminal domain EPJ55_RS08100 PF03306 Alpha-acetolactate decarboxylase EPJ55_RS08105 PF06574 FAD synthetase EPJ55_RS08105 PF01687 Riboflavin kinase EPJ55_RS08110 PF16198 tRNA pseudouridylate synthase B C-terminal domain EPJ55_RS08110 PF01509 TruB family pseudouridylate synthase (N terminal domain) EPJ55_RS08115 PF01202 Shikimate kinase EPJ55_RS08120 PF02153 Prephenate dehydrogenase EPJ55_RS08120 PF01842 ACT domain EPJ55_RS08125 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EPJ55_RS08135 PF01264 Chorismate synthase EPJ55_RS08140 PF07690 Major Facilitator Superfamily EPJ55_RS08145 PF02033 Ribosome-binding factor A EPJ55_RS08150 PF04760 Translation initiation factor IF-2, N-terminal region EPJ55_RS08150 PF11987 Translation-initiation factor 2 EPJ55_RS08150 PF00009 Elongation factor Tu GTP binding domain EPJ55_RS08155 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family EPJ55_RS08160 PF04296 Protein of unknown function (DUF448) EPJ55_RS08165 PF00575 S1 RNA binding domain EPJ55_RS08165 PF08529 NusA N-terminal domain EPJ55_RS08165 PF13184 NusA-like KH domain EPJ55_RS08170 PF02576 RimP N-terminal domain EPJ55_RS08170 PF17384 RimP C-terminal SH3 domain EPJ55_RS08175 PF07733 Bacterial DNA polymerase III alpha NTPase domain EPJ55_RS08175 PF02811 PHP domain EPJ55_RS08175 PF00929 Exonuclease EPJ55_RS08175 PF14480 DNA polymerase III polC-type N-terminus I EPJ55_RS08175 PF11490 DNA polymerase III polC-type N-terminus II EPJ55_RS08175 PF14579 Helix-hairpin-helix motif EPJ55_RS08175 PF17657 Bacterial DNA polymerase III alpha subunit finger domain EPJ55_RS08180 PF03129 Anticodon binding domain EPJ55_RS08180 PF04073 Aminoacyl-tRNA editing domain EPJ55_RS08180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) EPJ55_RS08185 PF02163 Peptidase family M50 EPJ55_RS08185 PF17820 PDZ domain EPJ55_RS08195 PF01255 Putative undecaprenyl diphosphate synthase EPJ55_RS08200 PF01765 Ribosome recycling factor EPJ55_RS08205 PF00696 Amino acid kinase family EPJ55_RS08210 PF00889 Elongation factor TS EPJ55_RS08215 PF00318 Ribosomal protein S2 EPJ55_RS08225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EPJ55_RS08225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain EPJ55_RS08230 PF01541 GIY-YIG catalytic domain EPJ55_RS08235 PF05175 Methyltransferase small domain EPJ55_RS08240 PF01553 Acyltransferase EPJ55_RS08245 PF03672 Uncharacterised protein family (UPF0154) EPJ55_RS08250 PF05979 Bacterial protein of unknown function (DUF896) EPJ55_RS08255 PF00717 Peptidase S24-like EPJ55_RS08255 PF01726 LexA DNA binding domain EPJ55_RS08270 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal EPJ55_RS08270 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal EPJ55_RS08285 PF00535 Glycosyl transferase family 2 EPJ55_RS08295 PF03816 Cell envelope-related transcriptional attenuator domain EPJ55_RS08300 PF00005 ABC transporter EPJ55_RS08310 PF01098 Cell cycle protein EPJ55_RS08370 PF01464 Transglycosylase SLT domain EPJ55_RS08580 PF01381 Helix-turn-helix EPJ55_RS08590 PF02254 TrkA-N domain EPJ55_RS08590 PF07885 Ion channel EPJ55_RS08625 PF01906 Putative heavy-metal-binding EPJ55_RS08640 PF00156 Phosphoribosyl transferase domain EPJ55_RS08645 PF17768 RecJ OB domain EPJ55_RS08645 PF02272 DHHA1 domain EPJ55_RS08645 PF10141 Single-strand DNA-specific exonuclease, C terminal domain EPJ55_RS08645 PF01368 DHH family EPJ55_RS08650 PF06305 Lipopolysaccharide assembly protein A domain EPJ55_RS08655 PF00106 short chain dehydrogenase EPJ55_RS08660 PF00753 Metallo-beta-lactamase superfamily EPJ55_RS08660 PF12706 Beta-lactamase superfamily domain EPJ55_RS08670 PF09269 Domain of unknown function (DUF1967) EPJ55_RS08670 PF01018 GTP1/OBG EPJ55_RS08670 PF01926 50S ribosome-binding GTPase EPJ55_RS08680 PF00294 pfkB family carbohydrate kinase EPJ55_RS08685 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EPJ55_RS08685 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EPJ55_RS08690 PF00149 Calcineurin-like phosphoesterase EPJ55_RS08715 PF00534 Glycosyl transferases group 1 EPJ55_RS08715 PF13439 Glycosyltransferase Family 4 EPJ55_RS08720 PF02397 Bacterial sugar transferase EPJ55_RS08725 PF01370 NAD dependent epimerase/dehydratase family EPJ55_RS08735 PF13614 AAA domain EPJ55_RS08745 PF02151 UvrB/uvrC motif EPJ55_RS08745 PF08459 UvrC Helix-hairpin-helix N-terminal EPJ55_RS08745 PF01541 GIY-YIG catalytic domain EPJ55_RS08750 PF00005 ABC transporter EPJ55_RS08755 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS08775 PF01926 50S ribosome-binding GTPase EPJ55_RS08780 PF06689 ClpX C4-type zinc finger EPJ55_RS08780 PF10431 C-terminal, D2-small domain, of ClpB protein EPJ55_RS08780 PF07724 AAA domain (Cdc48 subfamily) EPJ55_RS08785 PF05697 Bacterial trigger factor protein (TF) EPJ55_RS08785 PF05698 Bacterial trigger factor protein (TF) C-terminus EPJ55_RS08785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase EPJ55_RS08790 PF03144 Elongation factor Tu domain 2 EPJ55_RS08790 PF03143 Elongation factor Tu C-terminal domain EPJ55_RS08790 PF00009 Elongation factor Tu GTP binding domain EPJ55_RS08800 PF00753 Metallo-beta-lactamase superfamily EPJ55_RS08800 PF17770 Ribonuclease J C-terminal domain EPJ55_RS08800 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EPJ55_RS08805 PF00701 Dihydrodipicolinate synthetase family EPJ55_RS08810 PF07690 Major Facilitator Superfamily EPJ55_RS08815 PF00312 Ribosomal protein S15 EPJ55_RS08820 PF01649 Ribosomal protein S20 EPJ55_RS08825 PF06144 DNA polymerase III, delta subunit EPJ55_RS08830 PF03772 Competence protein EPJ55_RS08830 PF13567 Domain of unknown function (DUF4131) EPJ55_RS08830 PF00753 Metallo-beta-lactamase superfamily EPJ55_RS08835 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region EPJ55_RS08840 PF10531 SLBB domain EPJ55_RS08845 PF05362 Lon protease (S16) C-terminal proteolytic domain EPJ55_RS08845 PF13180 PDZ domain EPJ55_RS08850 PF01467 Cytidylyltransferase-like EPJ55_RS08860 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) EPJ55_RS08865 PF02785 Biotin carboxylase C-terminal domain EPJ55_RS08865 PF00289 Biotin carboxylase, N-terminal domain EPJ55_RS08865 PF00364 Biotin-requiring enzyme EPJ55_RS08865 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EPJ55_RS08865 PF02436 Conserved carboxylase domain EPJ55_RS08865 PF00682 HMGL-like EPJ55_RS08870 PF01098 Cell cycle protein EPJ55_RS08895 PF03144 Elongation factor Tu domain 2 EPJ55_RS08895 PF00009 Elongation factor Tu GTP binding domain EPJ55_RS08895 PF14492 Elongation Factor G, domain II EPJ55_RS08895 PF00679 Elongation factor G C-terminus EPJ55_RS08900 PF00459 Inositol monophosphatase family EPJ55_RS08905 PF05256 Uncharacterised protein family (UPF0223) EPJ55_RS08910 PF00056 lactate/malate dehydrogenase, NAD binding domain EPJ55_RS08910 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain EPJ55_RS08915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EPJ55_RS08915 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPJ55_RS08920 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) EPJ55_RS08920 PF00364 Biotin-requiring enzyme EPJ55_RS08920 PF02817 e3 binding domain EPJ55_RS08925 PF02779 Transketolase, pyrimidine binding domain EPJ55_RS08925 PF02780 Transketolase, C-terminal domain EPJ55_RS08930 PF00676 Dehydrogenase E1 component EPJ55_RS08935 PF01327 Polypeptide deformylase EPJ55_RS08945 PF07288 Protein of unknown function (DUF1447) EPJ55_RS08950 PF17770 Ribonuclease J C-terminal domain EPJ55_RS08950 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain EPJ55_RS08950 PF00753 Metallo-beta-lactamase superfamily EPJ55_RS08955 PF00781 Diacylglycerol kinase catalytic domain EPJ55_RS08965 PF06725 3D domain EPJ55_RS08965 PF01476 LysM domain EPJ55_RS08975 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase EPJ55_RS08975 PF14572 Phosphoribosyl synthetase-associated domain EPJ55_RS08980 PF13538 UvrD-like helicase C-terminal domain EPJ55_RS08980 PF14490 Helix-hairpin-helix containing domain EPJ55_RS08980 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain EPJ55_RS08990 PF00300 Histidine phosphatase superfamily (branch 1) EPJ55_RS09010 PF02254 TrkA-N domain EPJ55_RS09010 PF02080 TrkA-C domain EPJ55_RS09015 PF02386 Cation transport protein EPJ55_RS09030 PF00266 Aminotransferase class-V EPJ55_RS09035 PF01048 Phosphorylase superfamily EPJ55_RS09045 PF00293 NUDIX domain EPJ55_RS09050 PF01678 Diaminopimelate epimerase EPJ55_RS09055 PF06827 Zinc finger found in FPG and IleRS EPJ55_RS09055 PF00133 tRNA synthetases class I (I, L, M and V) EPJ55_RS09055 PF08264 Anticodon-binding domain of tRNA EPJ55_RS09060 PF05103 DivIVA protein EPJ55_RS09070 PF02325 YGGT family EPJ55_RS09075 PF04472 Cell division protein SepF EPJ55_RS09080 PF00091 Tubulin/FtsZ family, GTPase domain EPJ55_RS09080 PF12327 FtsZ family, C-terminal domain EPJ55_RS09085 PF02491 SHS2 domain inserted in FTSA EPJ55_RS09085 PF11983 Membrane-attachment and polymerisation-promoting switch EPJ55_RS09090 PF03799 Cell division protein FtsQ EPJ55_RS09090 PF08478 POTRA domain, FtsQ-type EPJ55_RS09095 PF03033 Glycosyltransferase family 28 N-terminal domain EPJ55_RS09095 PF04101 Glycosyltransferase family 28 C-terminal domain EPJ55_RS09100 PF08245 Mur ligase middle domain EPJ55_RS09100 PF02875 Mur ligase family, glutamate ligase domain EPJ55_RS09105 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 EPJ55_RS09105 PF00953 Glycosyl transferase family 4 EPJ55_RS09110 PF03717 Penicillin-binding Protein dimerisation domain EPJ55_RS09110 PF03793 PASTA domain EPJ55_RS09110 PF00905 Penicillin binding protein transpeptidase domain EPJ55_RS09120 PF01795 MraW methylase family EPJ55_RS09125 PF02381 MraZ protein, putative antitoxin-like EPJ55_RS09145 PF17854 FtsK alpha domain EPJ55_RS09145 PF09397 Ftsk gamma domain EPJ55_RS09145 PF01580 FtsK/SpoIIIE family EPJ55_RS09150 PF00588 SpoU rRNA Methylase family EPJ55_RS09160 PF05525 Branched-chain amino acid transport protein EPJ55_RS09170 PF00253 Ribosomal protein S14p/S29e EPJ55_RS09175 PF01594 AI-2E family transporter EPJ55_RS09185 PF10282 Lactonase, 7-bladed beta-propeller EPJ55_RS09190 PF03932 CutC family EPJ55_RS09195 PF00849 RNA pseudouridylate synthase EPJ55_RS09200 PF01513 ATP-NAD kinase EPJ55_RS09205 PF04607 Region found in RelA / SpoT proteins EPJ55_RS09215 PF01432 Peptidase family M3 EPJ55_RS09215 PF08439 Oligopeptidase F EPJ55_RS09225 PF05389 Negative regulator of genetic competence (MecA) EPJ55_RS09230 PF03960 ArsC family EPJ55_RS09235 PF12706 Beta-lactamase superfamily domain EPJ55_RS09360 PF00575 S1 RNA binding domain EPJ55_RS09365 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EPJ55_RS09370 PF09335 SNARE associated Golgi protein EPJ55_RS09380 PF13344 Haloacid dehalogenase-like hydrolase EPJ55_RS09385 PF06265 Protein of unknown function (DUF1027) EPJ55_RS09390 PF02872 5'-nucleotidase, C-terminal domain EPJ55_RS09400 PF00324 Amino acid permease EPJ55_RS09405 PF00871 Acetokinase family EPJ55_RS09410 PF02384 N-6 DNA Methylase EPJ55_RS09440 PF00437 Type II/IV secretion system protein EPJ55_RS09445 PF00294 pfkB family carbohydrate kinase EPJ55_RS09445 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EPJ55_RS09450 PF01709 Transcriptional regulator EPJ55_RS09465 PF00356 Bacterial regulatory proteins, lacI family EPJ55_RS09470 PF00557 Metallopeptidase family M24 EPJ55_RS09470 PF01321 Creatinase/Prolidase N-terminal domain EPJ55_RS09475 PF13411 MerR HTH family regulatory protein EPJ55_RS09490 PF00924 Mechanosensitive ion channel EPJ55_RS09495 PF07687 Peptidase dimerisation domain EPJ55_RS09495 PF01546 Peptidase family M20/M25/M40 EPJ55_RS09500 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal EPJ55_RS09500 PF00132 Bacterial transferase hexapeptide (six repeats) EPJ55_RS09500 PF14602 Hexapeptide repeat of succinyl-transferase EPJ55_RS09515 PF01725 Ham1 family EPJ55_RS09520 PF01177 Asp/Glu/Hydantoin racemase EPJ55_RS09525 PF10702 Protein of unknown function (DUF2507) EPJ55_RS09530 PF00085 Thioredoxin EPJ55_RS09535 PF01713 Smr domain EPJ55_RS09535 PF00488 MutS domain V EPJ55_RS09545 PF06949 Protein of unknown function (DUF1292) EPJ55_RS09550 PF03652 Holliday junction resolvase EPJ55_RS09555 PF06135 IreB regulatory phosphoprotein EPJ55_RS09560 PF02272 DHHA1 domain EPJ55_RS09560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain EPJ55_RS09560 PF01411 tRNA synthetases class II (A) EPJ55_RS09565 PF00270 DEAD/DEAH box helicase EPJ55_RS09565 PF00271 Helicase conserved C-terminal domain EPJ55_RS09570 PF02272 DHHA1 domain EPJ55_RS09570 PF01368 DHH family EPJ55_RS09575 PF00817 impB/mucB/samB family EPJ55_RS09575 PF11799 impB/mucB/samB family C-terminal domain EPJ55_RS09580 PF02699 Preprotein translocase subunit EPJ55_RS09585 PF01702 Queuine tRNA-ribosyltransferase EPJ55_RS09590 PF02547 Queuosine biosynthesis protein EPJ55_RS09595 PF17864 RuvB AAA lid domain EPJ55_RS09595 PF05491 RuvB C-terminal winged helix domain EPJ55_RS09595 PF05496 Holliday junction DNA helicase RuvB P-loop domain EPJ55_RS09600 PF01330 RuvA N terminal domain EPJ55_RS09600 PF07499 RuvA, C-terminal domain EPJ55_RS09620 PF08676 MutL C terminal dimerisation domain EPJ55_RS09620 PF01119 DNA mismatch repair protein, C-terminal domain EPJ55_RS09625 PF01624 MutS domain I EPJ55_RS09625 PF05192 MutS domain III EPJ55_RS09625 PF05190 MutS family domain IV EPJ55_RS09625 PF00488 MutS domain V EPJ55_RS09625 PF05188 MutS domain II EPJ55_RS09630 PF13277 YmdB-like protein EPJ55_RS09635 PF01966 HD domain EPJ55_RS09635 PF12072 Domain of unknown function (DUF3552) EPJ55_RS09635 PF00013 KH domain EPJ55_RS09640 PF00154 recA bacterial DNA recombination protein EPJ55_RS09645 PF02464 Competence-damaged protein EPJ55_RS09645 PF00994 Probable molybdopterin binding domain EPJ55_RS09645 PF18146 Damage-inducible protein CinA KH domain EPJ55_RS09650 PF01066 CDP-alcohol phosphatidyltransferase EPJ55_RS09655 PF13464 Domain of unknown function (DUF4115) EPJ55_RS09660 PF00675 Insulinase (Peptidase family M16) EPJ55_RS09660 PF05193 Peptidase M16 inactive domain EPJ55_RS09665 PF05193 Peptidase M16 inactive domain EPJ55_RS09670 PF13840 ACT domain EPJ55_RS09670 PF00696 Amino acid kinase family EPJ55_RS09675 PF00497 Bacterial extracellular solute-binding proteins, family 3 EPJ55_RS09680 PF00005 ABC transporter EPJ55_RS09685 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS09690 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain EPJ55_RS09695 PF03775 Septum formation inhibitor MinC, C-terminal domain EPJ55_RS09705 PF04085 rod shape-determining protein MreC EPJ55_RS09715 PF04002 RadC-like JAB domain EPJ55_RS09720 PF08245 Mur ligase middle domain EPJ55_RS09720 PF02875 Mur ligase family, glutamate ligase domain EPJ55_RS09725 PF08264 Anticodon-binding domain of tRNA EPJ55_RS09725 PF10458 Valyl tRNA synthetase tRNA binding arm EPJ55_RS09725 PF00133 tRNA synthetases class I (I, L, M and V) EPJ55_RS09730 PF08534 Redoxin EPJ55_RS09735 PF04262 Glutamate-cysteine ligase EPJ55_RS09735 PF18419 ATP-grasp-like domain EPJ55_RS09735 PF02655 ATP-grasp domain EPJ55_RS09740 PF02568 Thiamine biosynthesis protein (ThiI) EPJ55_RS09740 PF02926 THUMP domain EPJ55_RS09745 PF00266 Aminotransferase class-V EPJ55_RS09750 PF06160 Septation ring formation regulator, EzrA EPJ55_RS09755 PF13185 GAF domain EPJ55_RS09760 PF01479 S4 domain EPJ55_RS09760 PF00163 Ribosomal protein S4/S9 N-terminal domain EPJ55_RS09765 PF06335 Protein of unknown function (DUF1054) EPJ55_RS09780 PF01022 Bacterial regulatory protein, arsR family EPJ55_RS09785 PF18419 ATP-grasp-like domain EPJ55_RS09785 PF04262 Glutamate-cysteine ligase EPJ55_RS09790 PF16193 AAA C-terminal domain EPJ55_RS09790 PF12002 MgsA AAA+ ATPase C terminal EPJ55_RS09790 PF05496 Holliday junction DNA helicase RuvB P-loop domain EPJ55_RS09805 PF00582 Universal stress protein family EPJ55_RS09825 PF07478 D-ala D-ala ligase C-terminus EPJ55_RS09825 PF01820 D-ala D-ala ligase N-terminus EPJ55_RS09830 PF00107 Zinc-binding dehydrogenase EPJ55_RS09830 PF08240 Alcohol dehydrogenase GroES-like domain EPJ55_RS09845 PF03180 NLPA lipoprotein EPJ55_RS09855 PF09383 NIL domain EPJ55_RS09855 PF00005 ABC transporter EPJ55_RS09860 PF01597 Glycine cleavage H-protein EPJ55_RS09865 PF01098 Cell cycle protein EPJ55_RS09875 PF01809 Putative membrane protein insertion efficiency factor EPJ55_RS09890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) EPJ55_RS09895 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain EPJ55_RS09895 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain EPJ55_RS09900 PF02874 ATP synthase alpha/beta family, beta-barrel domain EPJ55_RS09900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EPJ55_RS09905 PF00231 ATP synthase EPJ55_RS09910 PF02874 ATP synthase alpha/beta family, beta-barrel domain EPJ55_RS09910 PF00306 ATP synthase alpha/beta chain, C terminal domain EPJ55_RS09910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain EPJ55_RS09915 PF00213 ATP synthase delta (OSCP) subunit EPJ55_RS09920 PF00430 ATP synthase B/B' CF(0) EPJ55_RS09925 PF00137 ATP synthase subunit C EPJ55_RS09930 PF00119 ATP synthase A chain EPJ55_RS09935 PF00860 Permease family EPJ55_RS09950 PF00464 Serine hydroxymethyltransferase EPJ55_RS09955 PF01300 Telomere recombination EPJ55_RS09955 PF03481 Putative GTP-binding controlling metal-binding EPJ55_RS09960 PF05175 Methyltransferase small domain EPJ55_RS09960 PF17827 PrmC N-terminal domain EPJ55_RS09965 PF00472 RF-1 domain EPJ55_RS09965 PF03462 PCRF domain EPJ55_RS09970 PF00265 Thymidine kinase EPJ55_RS09975 PF08245 Mur ligase middle domain EPJ55_RS09975 PF08353 Domain of unknown function (DUF1727) EPJ55_RS09980 PF07685 CobB/CobQ-like glutamine amidotransferase domain EPJ55_RS09985 PF01238 Phosphomannose isomerase type I EPJ55_RS09990 PF00144 Beta-lactamase EPJ55_RS10000 PF01063 Amino-transferase class IV EPJ55_RS10015 PF00005 ABC transporter EPJ55_RS10015 PF00664 ABC transporter transmembrane region EPJ55_RS10020 PF00005 ABC transporter EPJ55_RS10020 PF00664 ABC transporter transmembrane region EPJ55_RS10030 PF01522 Polysaccharide deacetylase EPJ55_RS10295 PF01381 Helix-turn-helix EPJ55_RS10340 PF13614 AAA domain EPJ55_RS10355 PF00589 Phage integrase family EPJ55_RS10355 PF02899 Phage integrase, N-terminal SAM-like domain EPJ55_RS10395 PF04860 Phage portal protein EPJ55_RS10460 PF00589 Phage integrase family EPJ55_RS10460 PF02899 Phage integrase, N-terminal SAM-like domain EPJ55_RS10485 PF06458 MucBP domain EPJ55_RS10495 PF00005 ABC transporter EPJ55_RS10495 PF00664 ABC transporter transmembrane region EPJ55_RS10520 PF01476 LysM domain EPJ55_RS10570 PF11999 Protein of unknown function (DUF3494) EPJ55_RS10570 PF02368 Bacterial Ig-like domain (group 2) EPJ55_RS10620 PF03592 Terminase small subunit EPJ55_RS10620 PF10668 Phage terminase small subunit EPJ55_RS10675 PF00145 C-5 cytosine-specific DNA methylase EPJ55_RS10740 PF01381 Helix-turn-helix EPJ55_RS10775 PF14659 Phage integrase, N-terminal SAM-like domain EPJ55_RS10775 PF00589 Phage integrase family EPJ55_RS10785 PF06800 Sugar transport protein EPJ55_RS10790 PF10672 S-adenosylmethionine-dependent methyltransferase EPJ55_RS10790 PF17785 PUA-like domain EPJ55_RS10795 PF00672 HAMP domain EPJ55_RS10795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPJ55_RS10795 PF00512 His Kinase A (phospho-acceptor) domain EPJ55_RS10800 PF00072 Response regulator receiver domain EPJ55_RS10800 PF00486 Transcriptional regulatory protein, C terminal EPJ55_RS10805 PF05167 Uncharacterised ACR (DUF711) EPJ55_RS10815 PF00892 EamA-like transporter family EPJ55_RS10840 PF07690 Major Facilitator Superfamily EPJ55_RS10860 PF00877 NlpC/P60 family EPJ55_RS10865 PF01037 Lrp/AsnC ligand binding domain EPJ55_RS10880 PF00990 Diguanylate cyclase, GGDEF domain EPJ55_RS10890 PF00005 ABC transporter EPJ55_RS10890 PF12848 ABC transporter EPJ55_RS10900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily EPJ55_RS10915 PF08546 Ketopantoate reductase PanE/ApbA C terminal EPJ55_RS10915 PF02558 Ketopantoate reductase PanE/ApbA EPJ55_RS10920 PF02645 Uncharacterised protein, DegV family COG1307 EPJ55_RS10925 PF00742 Homoserine dehydrogenase EPJ55_RS10925 PF03447 Homoserine dehydrogenase, NAD binding domain EPJ55_RS10930 PF01053 Cys/Met metabolism PLP-dependent enzyme EPJ55_RS10935 PF04204 Homoserine O-succinyltransferase EPJ55_RS10945 PF02653 Branched-chain amino acid transport system / permease component EPJ55_RS10950 PF00005 ABC transporter EPJ55_RS10955 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPJ55_RS10955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EPJ55_RS10960 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase EPJ55_RS10960 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase EPJ55_RS10965 PF03741 Integral membrane protein TerC family EPJ55_RS10970 PF14602 Hexapeptide repeat of succinyl-transferase EPJ55_RS10970 PF12464 Maltose acetyltransferase EPJ55_RS10975 PF00155 Aminotransferase class I and II EPJ55_RS10980 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase EPJ55_RS10985 PF01502 Phosphoribosyl-AMP cyclohydrolase EPJ55_RS10990 PF00977 Histidine biosynthesis protein EPJ55_RS10995 PF00977 Histidine biosynthesis protein EPJ55_RS11000 PF00117 Glutamine amidotransferase class-I EPJ55_RS11005 PF00475 Imidazoleglycerol-phosphate dehydratase EPJ55_RS11010 PF00815 Histidinol dehydrogenase EPJ55_RS11015 PF01634 ATP phosphoribosyltransferase EPJ55_RS11020 PF13393 Histidyl-tRNA synthetase EPJ55_RS11025 PF02811 PHP domain EPJ55_RS11065 PF06736 Protein of unknown function (DUF1211) EPJ55_RS11075 PF03050 Transposase IS66 family EPJ55_RS11075 PF13817 IS66 C-terminal element EPJ55_RS11075 PF13005 zinc-finger binding domain of transposase IS66 EPJ55_RS11075 PF13007 Transposase C of IS166 homeodomain EPJ55_RS11105 PF00884 Sulfatase EPJ55_RS11110 PF03009 Glycerophosphoryl diester phosphodiesterase family EPJ55_RS11115 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPJ55_RS11125 PF00746 LPXTG cell wall anchor motif EPJ55_RS11125 PF05737 Collagen binding domain EPJ55_RS11125 PF17961 Bacterial Ig domain EPJ55_RS11130 PF03976 Polyphosphate kinase 2 (PPK2) EPJ55_RS11135 PF00881 Nitroreductase family EPJ55_RS11140 PF01156 Inosine-uridine preferring nucleoside hydrolase EPJ55_RS11145 PF00075 RNase H EPJ55_RS11150 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD EPJ55_RS11155 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family EPJ55_RS11155 PF00356 Bacterial regulatory proteins, lacI family EPJ55_RS11160 PF01380 SIS domain EPJ55_RS11160 PF01418 Helix-turn-helix domain, rpiR family EPJ55_RS11165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EPJ55_RS11165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EPJ55_RS11170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold EPJ55_RS11170 PF02894 Oxidoreductase family, C-terminal alpha/beta domain EPJ55_RS11175 PF00999 Sodium/hydrogen exchanger family EPJ55_RS11185 PF00857 Isochorismatase family EPJ55_RS11195 PF00005 ABC transporter EPJ55_RS11200 PF00392 Bacterial regulatory proteins, gntR family EPJ55_RS11240 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EPJ55_RS11240 PF00205 Thiamine pyrophosphate enzyme, central domain EPJ55_RS11240 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EPJ55_RS11250 PF00326 Prolyl oligopeptidase family EPJ55_RS11255 PF00085 Thioredoxin EPJ55_RS11260 PF01053 Cys/Met metabolism PLP-dependent enzyme EPJ55_RS11290 PF03099 Biotin/lipoate A/B protein ligase family EPJ55_RS11290 PF10437 Bacterial lipoate protein ligase C-terminus EPJ55_RS11295 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EPJ55_RS11295 PF13457 GW (Gly-Tryp) dipeptide domain EPJ55_RS11305 PF00582 Universal stress protein family EPJ55_RS11310 PF00849 RNA pseudouridylate synthase EPJ55_RS11310 PF01479 S4 domain EPJ55_RS11325 PF13240 zinc-ribbon domain EPJ55_RS11330 PF01381 Helix-turn-helix EPJ55_RS11330 PF08671 Anti-repressor SinI EPJ55_RS11340 PF00534 Glycosyl transferases group 1 EPJ55_RS11345 PF09364 XFP N-terminal domain EPJ55_RS11345 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase EPJ55_RS11345 PF09363 XFP C-terminal domain EPJ55_RS11350 PF00756 Putative esterase EPJ55_RS11355 PF07702 UTRA domain EPJ55_RS11355 PF00392 Bacterial regulatory proteins, gntR family EPJ55_RS11360 PF04073 Aminoacyl-tRNA editing domain EPJ55_RS11370 PF01966 HD domain EPJ55_RS11400 PF03471 Transporter associated domain EPJ55_RS11400 PF00571 CBS domain EPJ55_RS11400 PF01595 Cyclin M transmembrane N-terminal domain EPJ55_RS11405 PF07972 NrdI Flavodoxin like EPJ55_RS11410 PF00999 Sodium/hydrogen exchanger family EPJ55_RS11415 PF07690 Major Facilitator Superfamily EPJ55_RS11420 PF07739 TipAS antibiotic-recognition domain EPJ55_RS11420 PF13411 MerR HTH family regulatory protein EPJ55_RS11425 PF00107 Zinc-binding dehydrogenase EPJ55_RS11425 PF08240 Alcohol dehydrogenase GroES-like domain EPJ55_RS11435 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain EPJ55_RS11435 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain EPJ55_RS11440 PF00392 Bacterial regulatory proteins, gntR family EPJ55_RS11440 PF00155 Aminotransferase class I and II EPJ55_RS11445 PF00155 Aminotransferase class I and II EPJ55_RS11450 PF00701 Dihydrodipicolinate synthetase family EPJ55_RS11460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPJ55_RS11460 PF03466 LysR substrate binding domain EPJ55_RS11465 PF13460 NAD(P)H-binding EPJ55_RS11475 PF12705 PD-(D/E)XK nuclease superfamily EPJ55_RS11475 PF00580 UvrD/REP helicase N-terminal domain EPJ55_RS11475 PF13361 UvrD-like helicase C-terminal domain EPJ55_RS11480 PF12705 PD-(D/E)XK nuclease superfamily EPJ55_RS11490 PF00156 Phosphoribosyl transferase domain EPJ55_RS11495 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family EPJ55_RS11500 PF01180 Dihydroorotate dehydrogenase EPJ55_RS11505 PF02142 MGS-like domain EPJ55_RS11505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain EPJ55_RS11505 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EPJ55_RS11510 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain EPJ55_RS11510 PF00117 Glutamine amidotransferase class-I EPJ55_RS11515 PF01979 Amidohydrolase family EPJ55_RS11520 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain EPJ55_RS11520 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain EPJ55_RS11525 PF00156 Phosphoribosyl transferase domain EPJ55_RS11530 PF07905 Purine catabolism regulatory protein-like family EPJ55_RS11530 PF13556 PucR C-terminal helix-turn-helix domain EPJ55_RS11530 PF17853 GGDEF-like domain EPJ55_RS11535 PF00860 Permease family EPJ55_RS11540 PF00860 Permease family EPJ55_RS11570 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain EPJ55_RS11570 PF02844 Phosphoribosylglycinamide synthetase, N domain EPJ55_RS11570 PF02843 Phosphoribosylglycinamide synthetase, C domain EPJ55_RS11575 PF01808 AICARFT/IMPCHase bienzyme EPJ55_RS11575 PF02142 MGS-like domain EPJ55_RS11580 PF00551 Formyl transferase EPJ55_RS11585 PF00586 AIR synthase related protein, N-terminal domain EPJ55_RS11585 PF02769 AIR synthase related protein, C-terminal domain EPJ55_RS11590 PF13537 Glutamine amidotransferase domain EPJ55_RS11590 PF00156 Phosphoribosyl transferase domain EPJ55_RS11595 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain EPJ55_RS11595 PF02769 AIR synthase related protein, C-terminal domain EPJ55_RS11595 PF00586 AIR synthase related protein, N-terminal domain EPJ55_RS11605 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase EPJ55_RS11610 PF01259 SAICAR synthetase EPJ55_RS11615 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain EPJ55_RS11615 PF02222 ATP-grasp domain EPJ55_RS11620 PF00731 AIR carboxylase EPJ55_RS11625 PF00890 FAD binding domain EPJ55_RS11625 PF03358 NADPH-dependent FMN reductase EPJ55_RS11625 PF04205 FMN-binding domain EPJ55_RS11630 PF04205 FMN-binding domain EPJ55_RS11630 PF03358 NADPH-dependent FMN reductase EPJ55_RS11630 PF00890 FAD binding domain EPJ55_RS11635 PF03099 Biotin/lipoate A/B protein ligase family EPJ55_RS11635 PF10437 Bacterial lipoate protein ligase C-terminus EPJ55_RS11640 PF13350 Tyrosine phosphatase family EPJ55_RS11655 PF00710 Asparaginase, N-terminal EPJ55_RS11655 PF17763 Glutaminase/Asparaginase C-terminal domain EPJ55_RS11660 PF00005 ABC transporter EPJ55_RS11675 PF00392 Bacterial regulatory proteins, gntR family EPJ55_RS11680 PF00005 ABC transporter EPJ55_RS11690 PF00582 Universal stress protein family EPJ55_RS11700 PF04138 GtrA-like protein EPJ55_RS11720 PF00155 Aminotransferase class I and II EPJ55_RS11740 PF02903 Alpha amylase, N-terminal ig-like domain EPJ55_RS11740 PF00128 Alpha amylase, catalytic domain EPJ55_RS11745 PF14821 Threonine synthase N terminus EPJ55_RS11745 PF00291 Pyridoxal-phosphate dependent enzyme EPJ55_RS11760 PF00132 Bacterial transferase hexapeptide (six repeats) EPJ55_RS11760 PF12464 Maltose acetyltransferase EPJ55_RS11765 PF00293 NUDIX domain EPJ55_RS11795 PF02829 3H domain EPJ55_RS11795 PF08279 HTH domain EPJ55_RS11800 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain EPJ55_RS11800 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain EPJ55_RS11800 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family EPJ55_RS11805 PF00440 Bacterial regulatory proteins, tetR family EPJ55_RS11815 PF00005 ABC transporter EPJ55_RS11820 PF00291 Pyridoxal-phosphate dependent enzyme EPJ55_RS11825 PF00232 Glycosyl hydrolase family 1 EPJ55_RS11830 PF00232 Glycosyl hydrolase family 1 EPJ55_RS11835 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit EPJ55_RS11840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EPJ55_RS11850 PF00535 Glycosyl transferase family 2 EPJ55_RS11855 PF00300 Histidine phosphatase superfamily (branch 1) EPJ55_RS11870 PF02558 Ketopantoate reductase PanE/ApbA EPJ55_RS11870 PF08546 Ketopantoate reductase PanE/ApbA C terminal EPJ55_RS11880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain EPJ55_RS11895 PF00258 Flavodoxin EPJ55_RS11915 PF01487 Type I 3-dehydroquinase EPJ55_RS11930 PF00248 Aldo/keto reductase family EPJ55_RS11965 PF07155 ECF-type riboflavin transporter, S component EPJ55_RS11970 PF01479 S4 domain EPJ55_RS11970 PF00579 tRNA synthetases class I (W and Y) EPJ55_RS11985 PF13529 Peptidase_C39 like family EPJ55_RS11995 PF04474 Protein of unknown function (DUF554) EPJ55_RS12000 PF13411 MerR HTH family regulatory protein EPJ55_RS12000 PF06445 GyrI-like small molecule binding domain EPJ55_RS12005 PF00375 Sodium:dicarboxylate symporter family EPJ55_RS12015 PF02687 FtsX-like permease family EPJ55_RS12020 PF00005 ABC transporter EPJ55_RS12030 PF01156 Inosine-uridine preferring nucleoside hydrolase EPJ55_RS12040 PF00999 Sodium/hydrogen exchanger family EPJ55_RS12055 PF10415 Fumarase C C-terminus EPJ55_RS12055 PF00206 Lyase EPJ55_RS12065 PF07690 Major Facilitator Superfamily EPJ55_RS12075 PF07690 Major Facilitator Superfamily EPJ55_RS12085 PF13302 Acetyltransferase (GNAT) domain EPJ55_RS12090 PF03601 Conserved hypothetical protein 698 EPJ55_RS12095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPJ55_RS12095 PF03466 LysR substrate binding domain EPJ55_RS12100 PF13439 Glycosyltransferase Family 4 EPJ55_RS12100 PF00534 Glycosyl transferases group 1 EPJ55_RS12105 PF13439 Glycosyltransferase Family 4 EPJ55_RS12120 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain EPJ55_RS12120 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain EPJ55_RS12125 PF00005 ABC transporter EPJ55_RS12125 PF13732 Domain of unknown function (DUF4162) EPJ55_RS12135 PF00106 short chain dehydrogenase EPJ55_RS12150 PF13411 MerR HTH family regulatory protein EPJ55_RS12155 PF01546 Peptidase family M20/M25/M40 EPJ55_RS12155 PF07687 Peptidase dimerisation domain EPJ55_RS12165 PF00005 ABC transporter EPJ55_RS12175 PF00730 HhH-GPD superfamily base excision DNA repair protein EPJ55_RS12175 PF00633 Helix-hairpin-helix motif EPJ55_RS12180 PF12464 Maltose acetyltransferase EPJ55_RS12180 PF14602 Hexapeptide repeat of succinyl-transferase EPJ55_RS12185 PF10502 Signal peptidase, peptidase S26 EPJ55_RS12190 PF10502 Signal peptidase, peptidase S26 EPJ55_RS12200 PF00583 Acetyltransferase (GNAT) family EPJ55_RS12225 PF03466 LysR substrate binding domain EPJ55_RS12225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPJ55_RS12235 PF08240 Alcohol dehydrogenase GroES-like domain EPJ55_RS12235 PF00107 Zinc-binding dehydrogenase EPJ55_RS12250 PF00582 Universal stress protein family EPJ55_RS12255 PF12464 Maltose acetyltransferase EPJ55_RS12255 PF14602 Hexapeptide repeat of succinyl-transferase EPJ55_RS12260 PF13419 Haloacid dehalogenase-like hydrolase EPJ55_RS12270 PF00155 Aminotransferase class I and II EPJ55_RS12280 PF00248 Aldo/keto reductase family EPJ55_RS12285 PF00664 ABC transporter transmembrane region EPJ55_RS12285 PF00005 ABC transporter EPJ55_RS12290 PF00664 ABC transporter transmembrane region EPJ55_RS12290 PF00005 ABC transporter EPJ55_RS12295 PF07690 Major Facilitator Superfamily EPJ55_RS12325 PF01022 Bacterial regulatory protein, arsR family EPJ55_RS12330 PF01223 DNA/RNA non-specific endonuclease EPJ55_RS12365 PF00005 ABC transporter EPJ55_RS12365 PF17760 UvrA interaction domain EPJ55_RS12365 PF17755 UvrA DNA-binding domain EPJ55_RS12385 PF00561 alpha/beta hydrolase fold EPJ55_RS12390 PF13520 Amino acid permease EPJ55_RS12395 PF11700 Vacuole effluxer Atg22 like EPJ55_RS12430 PF00990 Diguanylate cyclase, GGDEF domain EPJ55_RS12435 PF12792 CSS motif domain associated with EAL EPJ55_RS12435 PF00563 EAL domain EPJ55_RS12445 PF13597 Anaerobic ribonucleoside-triphosphate reductase EPJ55_RS12445 PF03477 ATP cone domain EPJ55_RS12455 PF01327 Polypeptide deformylase EPJ55_RS12460 PF02424 ApbE family EPJ55_RS12465 PF01207 Dihydrouridine synthase (Dus) EPJ55_RS12480 PF03466 LysR substrate binding domain EPJ55_RS12480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPJ55_RS12485 PF00939 Sodium:sulfate symporter transmembrane region EPJ55_RS12490 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase EPJ55_RS12535 PF00892 EamA-like transporter family EPJ55_RS12560 PF00480 ROK family EPJ55_RS12565 PF00664 ABC transporter transmembrane region EPJ55_RS12565 PF00005 ABC transporter EPJ55_RS12575 PF00881 Nitroreductase family EPJ55_RS12585 PF00005 ABC transporter EPJ55_RS12590 PF02653 Branched-chain amino acid transport system / permease component EPJ55_RS12620 PF01743 Poly A polymerase head domain EPJ55_RS12620 PF00571 CBS domain EPJ55_RS12620 PF01368 DHH family EPJ55_RS12620 PF02272 DHHA1 domain EPJ55_RS12620 PF12627 Probable RNA and SrmB- binding site of polymerase A EPJ55_RS12625 PF00005 ABC transporter EPJ55_RS12630 PF12399 Branched-chain amino acid ATP-binding cassette transporter EPJ55_RS12630 PF00005 ABC transporter EPJ55_RS12635 PF11862 Domain of unknown function (DUF3382) EPJ55_RS12635 PF02653 Branched-chain amino acid transport system / permease component EPJ55_RS12640 PF02653 Branched-chain amino acid transport system / permease component EPJ55_RS12645 PF13458 Periplasmic binding protein EPJ55_RS12655 PF00413 Matrixin EPJ55_RS12660 PF04138 GtrA-like protein EPJ55_RS12670 PF01566 Natural resistance-associated macrophage protein EPJ55_RS12690 PF01022 Bacterial regulatory protein, arsR family EPJ55_RS12700 PF02687 FtsX-like permease family EPJ55_RS12700 PF12704 MacB-like periplasmic core domain EPJ55_RS12700 PF00005 ABC transporter EPJ55_RS12735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EPJ55_RS12740 PF02378 Phosphotransferase system, EIIC EPJ55_RS12745 PF00232 Glycosyl hydrolase family 1 EPJ55_RS12755 PF13411 MerR HTH family regulatory protein EPJ55_RS12760 PF06737 Transglycosylase-like domain EPJ55_RS12765 PF01464 Transglycosylase SLT domain EPJ55_RS12805 PF11798 IMS family HHH motif EPJ55_RS12805 PF11799 impB/mucB/samB family C-terminal domain EPJ55_RS12805 PF00817 impB/mucB/samB family EPJ55_RS12815 PF00664 ABC transporter transmembrane region EPJ55_RS12815 PF00005 ABC transporter EPJ55_RS12820 PF00664 ABC transporter transmembrane region EPJ55_RS12820 PF00005 ABC transporter EPJ55_RS12830 PF01546 Peptidase family M20/M25/M40 EPJ55_RS12830 PF07687 Peptidase dimerisation domain EPJ55_RS12855 PF13520 Amino acid permease EPJ55_RS12865 PF00465 Iron-containing alcohol dehydrogenase EPJ55_RS12870 PF00107 Zinc-binding dehydrogenase EPJ55_RS12870 PF08240 Alcohol dehydrogenase GroES-like domain EPJ55_RS12875 PF00403 Heavy-metal-associated domain EPJ55_RS12930 PF08240 Alcohol dehydrogenase GroES-like domain EPJ55_RS12930 PF00107 Zinc-binding dehydrogenase EPJ55_RS12960 PF06458 MucBP domain EPJ55_RS12970 PF13419 Haloacid dehalogenase-like hydrolase EPJ55_RS12975 PF01638 HxlR-like helix-turn-helix EPJ55_RS12980 PF07690 Major Facilitator Superfamily EPJ55_RS12990 PF00733 Asparagine synthase EPJ55_RS12990 PF13537 Glutamine amidotransferase domain EPJ55_RS12995 PF04397 LytTr DNA-binding domain EPJ55_RS12995 PF00072 Response regulator receiver domain EPJ55_RS13005 PF00440 Bacterial regulatory proteins, tetR family EPJ55_RS13005 PF08359 YsiA-like protein, C-terminal region EPJ55_RS13015 PF00171 Aldehyde dehydrogenase family EPJ55_RS13030 PF01638 HxlR-like helix-turn-helix EPJ55_RS13035 PF00106 short chain dehydrogenase EPJ55_RS13050 PF06736 Protein of unknown function (DUF1211) EPJ55_RS13055 PF00248 Aldo/keto reductase family EPJ55_RS13075 PF07690 Major Facilitator Superfamily EPJ55_RS13085 PF01497 Periplasmic binding protein EPJ55_RS13090 PF00005 ABC transporter EPJ55_RS13095 PF01032 FecCD transport family EPJ55_RS13100 PF01032 FecCD transport family EPJ55_RS13115 PF00106 short chain dehydrogenase EPJ55_RS13120 PF14602 Hexapeptide repeat of succinyl-transferase EPJ55_RS13120 PF12464 Maltose acetyltransferase EPJ55_RS13155 PF06458 MucBP domain EPJ55_RS13185 PF09297 NADH pyrophosphatase zinc ribbon domain EPJ55_RS13185 PF00293 NUDIX domain EPJ55_RS13190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPJ55_RS13190 PF03466 LysR substrate binding domain EPJ55_RS13195 PF00890 FAD binding domain EPJ55_RS13195 PF04205 FMN-binding domain EPJ55_RS13195 PF03358 NADPH-dependent FMN reductase EPJ55_RS13205 PF00210 Ferritin-like domain EPJ55_RS13215 PF00232 Glycosyl hydrolase family 1 EPJ55_RS13220 PF02378 Phosphotransferase system, EIIC EPJ55_RS13235 PF13411 MerR HTH family regulatory protein EPJ55_RS13255 PF01965 DJ-1/PfpI family EPJ55_RS13275 PF02615 Malate/L-lactate dehydrogenase EPJ55_RS13290 PF03734 L,D-transpeptidase catalytic domain EPJ55_RS13300 PF00300 Histidine phosphatase superfamily (branch 1) EPJ55_RS13305 PF01594 AI-2E family transporter EPJ55_RS13310 PF00480 ROK family EPJ55_RS13370 PF00583 Acetyltransferase (GNAT) family EPJ55_RS13375 PF00768 D-alanyl-D-alanine carboxypeptidase EPJ55_RS13375 PF07943 Penicillin-binding protein 5, C-terminal domain EPJ55_RS13380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPJ55_RS13380 PF00512 His Kinase A (phospho-acceptor) domain EPJ55_RS13385 PF00072 Response regulator receiver domain EPJ55_RS13385 PF00486 Transcriptional regulatory protein, C terminal EPJ55_RS13400 PF00571 CBS domain EPJ55_RS13400 PF00478 IMP dehydrogenase / GMP reductase domain EPJ55_RS13410 PF01926 50S ribosome-binding GTPase EPJ55_RS13410 PF06071 Protein of unknown function (DUF933) EPJ55_RS13415 PF06107 Bacterial protein of unknown function (DUF951) EPJ55_RS13420 PF02195 ParB-like nuclease domain EPJ55_RS13420 PF17762 HTH domain found in ParB protein EPJ55_RS13425 PF13614 AAA domain EPJ55_RS13430 PF17762 HTH domain found in ParB protein EPJ55_RS13430 PF02195 ParB-like nuclease domain EPJ55_RS13435 PF02527 rRNA small subunit methyltransferase G EPJ55_RS13440 PF07662 Na+ dependent nucleoside transporter C-terminus EPJ55_RS13440 PF01773 Na+ dependent nucleoside transporter N-terminus EPJ55_RS13450 PF03466 LysR substrate binding domain EPJ55_RS13450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPJ55_RS13455 PF00155 Aminotransferase class I and II EPJ55_RS13460 PF00497 Bacterial extracellular solute-binding proteins, family 3 EPJ55_RS13465 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS13470 PF00005 ABC transporter EPJ55_RS13500 PF02378 Phosphotransferase system, EIIC EPJ55_RS13500 PF00367 phosphotransferase system, EIIB EPJ55_RS13500 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EPJ55_RS13505 PF00128 Alpha amylase, catalytic domain EPJ55_RS13510 PF00356 Bacterial regulatory proteins, lacI family EPJ55_RS13520 PF03649 Uncharacterised protein family (UPF0014) EPJ55_RS13525 PF00005 ABC transporter EPJ55_RS13530 PF05958 tRNA (Uracil-5-)-methyltransferase EPJ55_RS13530 PF01938 TRAM domain EPJ55_RS13560 PF02378 Phosphotransferase system, EIIC EPJ55_RS13560 PF00367 phosphotransferase system, EIIB EPJ55_RS13560 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EPJ55_RS13575 PF00890 FAD binding domain EPJ55_RS13575 PF04205 FMN-binding domain EPJ55_RS13575 PF03358 NADPH-dependent FMN reductase EPJ55_RS13590 PF01475 Ferric uptake regulator family EPJ55_RS13615 PF03788 LrgA family EPJ55_RS13620 PF04172 LrgB-like family EPJ55_RS13625 PF02645 Uncharacterised protein, DegV family COG1307 EPJ55_RS13635 PF04298 Putative neutral zinc metallopeptidase EPJ55_RS13640 PF01593 Flavin containing amine oxidoreductase EPJ55_RS13655 PF02595 Glycerate kinase family EPJ55_RS13660 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPJ55_RS13660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EPJ55_RS13670 PF10397 Adenylosuccinate lyase C-terminus EPJ55_RS13670 PF00206 Lyase EPJ55_RS13675 PF00709 Adenylosuccinate synthetase EPJ55_RS13680 PF00478 IMP dehydrogenase / GMP reductase domain EPJ55_RS13685 PF13350 Tyrosine phosphatase family EPJ55_RS13690 PF13091 PLD-like domain EPJ55_RS13690 PF13396 Phospholipase_D-nuclease N-terminal EPJ55_RS13710 PF06736 Protein of unknown function (DUF1211) EPJ55_RS13720 PF13520 Amino acid permease EPJ55_RS13725 PF02705 K+ potassium transporter EPJ55_RS13730 PF01545 Cation efflux family EPJ55_RS13730 PF16916 Dimerisation domain of Zinc Transporter EPJ55_RS13735 PF01594 AI-2E family transporter EPJ55_RS13740 PF01717 Cobalamin-independent synthase, Catalytic domain EPJ55_RS13745 PF00893 Small Multidrug Resistance protein EPJ55_RS13750 PF00893 Small Multidrug Resistance protein EPJ55_RS13755 PF03006 Haemolysin-III related EPJ55_RS13760 PF01022 Bacterial regulatory protein, arsR family EPJ55_RS13765 PF01545 Cation efflux family EPJ55_RS13780 PF00809 Pterin binding enzyme EPJ55_RS13785 PF01725 Ham1 family EPJ55_RS13790 PF02875 Mur ligase family, glutamate ligase domain EPJ55_RS13790 PF08245 Mur ligase middle domain EPJ55_RS13795 PF01227 GTP cyclohydrolase I EPJ55_RS13800 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) EPJ55_RS13815 PF01297 Zinc-uptake complex component A periplasmic EPJ55_RS13820 PF07690 Major Facilitator Superfamily EPJ55_RS13850 PF00144 Beta-lactamase EPJ55_RS13855 PF01228 Glycine radical EPJ55_RS13855 PF02901 Pyruvate formate lyase-like EPJ55_RS13860 PF04055 Radical SAM superfamily EPJ55_RS13865 PF01883 Iron-sulfur cluster assembly protein EPJ55_RS13870 PF00248 Aldo/keto reductase family EPJ55_RS13895 PF02028 BCCT, betaine/carnitine/choline family transporter EPJ55_RS13900 PF00403 Heavy-metal-associated domain EPJ55_RS13910 PF04237 YjbR EPJ55_RS13920 PF13382 Adenine deaminase C-terminal domain EPJ55_RS13920 PF01979 Amidohydrolase family EPJ55_RS13925 PF01380 SIS domain EPJ55_RS13935 PF03553 Na+/H+ antiporter family EPJ55_RS13940 PF00324 Amino acid permease EPJ55_RS13950 PF04608 Phosphatidylglycerophosphatase A EPJ55_RS13965 PF03960 ArsC family EPJ55_RS13970 PF04343 Protein of unknown function, DUF488 EPJ55_RS13980 PF14815 NUDIX domain EPJ55_RS13980 PF00730 HhH-GPD superfamily base excision DNA repair protein EPJ55_RS13995 PF00011 Hsp20/alpha crystallin family EPJ55_RS14020 PF00892 EamA-like transporter family EPJ55_RS14035 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family EPJ55_RS14045 PF03965 Penicillinase repressor EPJ55_RS14060 PF07690 Major Facilitator Superfamily EPJ55_RS14085 PF07690 Major Facilitator Superfamily EPJ55_RS14085 PF00083 Sugar (and other) transporter EPJ55_RS14110 PF00689 Cation transporting ATPase, C-terminus EPJ55_RS14110 PF00690 Cation transporter/ATPase, N-terminus EPJ55_RS14115 PF02872 5'-nucleotidase, C-terminal domain EPJ55_RS14115 PF00149 Calcineurin-like phosphoesterase EPJ55_RS14125 PF00248 Aldo/keto reductase family EPJ55_RS14145 PF02673 Bacitracin resistance protein BacA EPJ55_RS14150 PF01661 Macro domain EPJ55_RS14185 PF12833 Helix-turn-helix domain EPJ55_RS14210 PF00282 Pyridoxal-dependent decarboxylase conserved domain EPJ55_RS14215 PF00877 NlpC/P60 family EPJ55_RS14245 PF01209 ubiE/COQ5 methyltransferase family EPJ55_RS14260 PF00403 Heavy-metal-associated domain EPJ55_RS14265 PF00230 Major intrinsic protein EPJ55_RS14270 PF00085 Thioredoxin EPJ55_RS14275 PF02583 Metal-sensitive transcriptional repressor EPJ55_RS14300 PF13545 Crp-like helix-turn-helix domain EPJ55_RS14300 PF00027 Cyclic nucleotide-binding domain EPJ55_RS14305 PF05649 Peptidase family M13 EPJ55_RS14305 PF01431 Peptidase family M13 EPJ55_RS14315 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPJ55_RS14315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain EPJ55_RS14365 PF00230 Major intrinsic protein EPJ55_RS14370 PF03109 ABC1 family EPJ55_RS14375 PF05525 Branched-chain amino acid transport protein EPJ55_RS14380 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EPJ55_RS14385 PF02449 Beta-galactosidase EPJ55_RS14385 PF08532 Beta-galactosidase trimerisation domain EPJ55_RS14385 PF08533 Beta-galactosidase C-terminal domain EPJ55_RS14390 PF00356 Bacterial regulatory proteins, lacI family EPJ55_RS14410 PF07690 Major Facilitator Superfamily EPJ55_RS14430 PF02661 Fic/DOC family EPJ55_RS14430 PF18543 Intracellular delivery domain EPJ55_RS14435 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA EPJ55_RS14440 PF00356 Bacterial regulatory proteins, lacI family EPJ55_RS14445 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain EPJ55_RS14445 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain EPJ55_RS14450 PF16363 GDP-mannose 4,6 dehydratase EPJ55_RS14455 PF08544 GHMP kinases C terminal EPJ55_RS14455 PF00288 GHMP kinases N terminal domain EPJ55_RS14455 PF10509 Galactokinase galactose-binding signature EPJ55_RS14460 PF00703 Glycosyl hydrolases family 2 EPJ55_RS14460 PF02836 Glycosyl hydrolases family 2, TIM barrel domain EPJ55_RS14460 PF02837 Glycosyl hydrolases family 2, sugar binding domain EPJ55_RS14465 PF02929 Beta galactosidase small chain EPJ55_RS14470 PF16874 Glycosyl hydrolase family 36 C-terminal domain EPJ55_RS14470 PF16875 Glycosyl hydrolase family 36 N-terminal domain EPJ55_RS14475 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EPJ55_RS14480 PF01263 Aldose 1-epimerase EPJ55_RS14485 PF00356 Bacterial regulatory proteins, lacI family EPJ55_RS14490 PF00248 Aldo/keto reductase family EPJ55_RS14505 PF02424 ApbE family EPJ55_RS14510 PF01487 Type I 3-dehydroquinase EPJ55_RS14515 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EPJ55_RS14515 PF08501 Shikimate dehydrogenase substrate binding domain EPJ55_RS14520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPJ55_RS14520 PF03466 LysR substrate binding domain EPJ55_RS14525 PF07690 Major Facilitator Superfamily EPJ55_RS14530 PF08501 Shikimate dehydrogenase substrate binding domain EPJ55_RS14530 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EPJ55_RS14535 PF08501 Shikimate dehydrogenase substrate binding domain EPJ55_RS14535 PF18317 Shikimate 5'-dehydrogenase C-terminal domain EPJ55_RS14550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family EPJ55_RS14550 PF03466 LysR substrate binding domain EPJ55_RS14555 PF07690 Major Facilitator Superfamily EPJ55_RS14565 PF12697 Alpha/beta hydrolase family EPJ55_RS14570 PF07702 UTRA domain EPJ55_RS14570 PF00392 Bacterial regulatory proteins, gntR family EPJ55_RS14575 PF02378 Phosphotransferase system, EIIC EPJ55_RS14580 PF13580 SIS domain EPJ55_RS14585 PF01869 BadF/BadG/BcrA/BcrD ATPase family EPJ55_RS14595 PF00232 Glycosyl hydrolase family 1 EPJ55_RS14600 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EPJ55_RS14600 PF02378 Phosphotransferase system, EIIC EPJ55_RS14600 PF00367 phosphotransferase system, EIIB EPJ55_RS14605 PF03123 CAT RNA binding domain EPJ55_RS14605 PF00874 PRD domain EPJ55_RS14615 PF00155 Aminotransferase class I and II EPJ55_RS14620 PF02378 Phosphotransferase system, EIIC EPJ55_RS14620 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EPJ55_RS14625 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EPJ55_RS14625 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EPJ55_RS14630 PF00367 phosphotransferase system, EIIB EPJ55_RS14630 PF02378 Phosphotransferase system, EIIC EPJ55_RS14630 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EPJ55_RS14635 PF01418 Helix-turn-helix domain, rpiR family EPJ55_RS14635 PF01380 SIS domain EPJ55_RS14640 PF02378 Phosphotransferase system, EIIC EPJ55_RS14640 PF00367 phosphotransferase system, EIIB EPJ55_RS14645 PF01380 SIS domain EPJ55_RS14655 PF00232 Glycosyl hydrolase family 1 EPJ55_RS14660 PF00232 Glycosyl hydrolase family 1 EPJ55_RS14665 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 EPJ55_RS14665 PF00367 phosphotransferase system, EIIB EPJ55_RS14665 PF02378 Phosphotransferase system, EIIC EPJ55_RS14675 PF03633 Glycosyl hydrolase family 65, C-terminal domain EPJ55_RS14675 PF03632 Glycosyl hydrolase family 65 central catalytic domain EPJ55_RS14675 PF03636 Glycosyl hydrolase family 65, N-terminal domain EPJ55_RS14680 PF00356 Bacterial regulatory proteins, lacI family EPJ55_RS14690 PF01055 Glycosyl hydrolases family 31 EPJ55_RS14690 PF13802 Galactose mutarotase-like EPJ55_RS14690 PF17137 Domain of unknown function (DUF5110) EPJ55_RS14690 PF16338 Domain of unknown function (DUF4968) EPJ55_RS14720 PF00456 Transketolase, thiamine diphosphate binding domain EPJ55_RS14720 PF02779 Transketolase, pyrimidine binding domain EPJ55_RS14720 PF02780 Transketolase, C-terminal domain EPJ55_RS14725 PF00923 Transaldolase/Fructose-6-phosphate aldolase EPJ55_RS14730 PF00834 Ribulose-phosphate 3 epimerase family EPJ55_RS14735 PF02378 Phosphotransferase system, EIIC EPJ55_RS14735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EPJ55_RS14740 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EPJ55_RS14745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EPJ55_RS14755 PF00874 PRD domain EPJ55_RS14755 PF05043 Mga helix-turn-helix domain EPJ55_RS14755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EPJ55_RS14755 PF08279 HTH domain EPJ55_RS14755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 EPJ55_RS14760 PF00107 Zinc-binding dehydrogenase EPJ55_RS14760 PF08240 Alcohol dehydrogenase GroES-like domain EPJ55_RS14765 PF03611 PTS system sugar-specific permease component EPJ55_RS14770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit EPJ55_RS14780 PF00455 DeoR C terminal sensor domain EPJ55_RS14780 PF08220 DeoR-like helix-turn-helix domain EPJ55_RS14790 PF09363 XFP C-terminal domain EPJ55_RS14790 PF09364 XFP N-terminal domain EPJ55_RS14790 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase EPJ55_RS14795 PF14883 Hypothetical glycosyl hydrolase family 13 EPJ55_RS14795 PF01522 Polysaccharide deacetylase EPJ55_RS14805 PF00535 Glycosyl transferase family 2 EPJ55_RS14810 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase EPJ55_RS14815 PF14759 Reductase C-terminal EPJ55_RS14815 PF07992 Pyridine nucleotide-disulphide oxidoreductase EPJ55_RS14835 PF04226 Transglycosylase associated protein EPJ55_RS14840 PF06628 Catalase-related immune-responsive EPJ55_RS14840 PF00199 Catalase EPJ55_RS14845 PF03960 ArsC family EPJ55_RS14850 PF00072 Response regulator receiver domain EPJ55_RS14850 PF04397 LytTr DNA-binding domain EPJ55_RS14865 PF04647 Accessory gene regulator B EPJ55_RS14885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EPJ55_RS14885 PF00205 Thiamine pyrophosphate enzyme, central domain EPJ55_RS14885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EPJ55_RS14890 PF02082 Transcriptional regulator EPJ55_RS14895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain EPJ55_RS14895 PF00205 Thiamine pyrophosphate enzyme, central domain EPJ55_RS14895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain EPJ55_RS14905 PF02743 Cache domain EPJ55_RS14905 PF06580 Histidine kinase EPJ55_RS14905 PF00672 HAMP domain EPJ55_RS14905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase EPJ55_RS14920 PF12010 Domain of unknown function (DUF3502) EPJ55_RS14925 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS14930 PF00528 Binding-protein-dependent transport system inner membrane component EPJ55_RS14940 PF01497 Periplasmic binding protein EPJ55_RS14940 PF12833 Helix-turn-helix domain EPJ55_RS14945 PF00664 ABC transporter transmembrane region EPJ55_RS14945 PF00005 ABC transporter EPJ55_RS14950 PF00005 ABC transporter EPJ55_RS14950 PF00664 ABC transporter transmembrane region EPJ55_RS14955 PF07702 UTRA domain EPJ55_RS14955 PF00392 Bacterial regulatory proteins, gntR family EPJ55_RS14960 PF13556 PucR C-terminal helix-turn-helix domain EPJ55_RS14970 PF07663 Sorbitol phosphotransferase enzyme II C-terminus EPJ55_RS14970 PF03612 Sorbitol phosphotransferase enzyme II N-terminus EPJ55_RS14975 PF03608 PTS system enzyme II sorbitol-specific factor EPJ55_RS14990 PF00106 short chain dehydrogenase EPJ55_RS14995 PF06800 Sugar transport protein EPJ55_RS15000 PF05025 RbsD / FucU transport protein family EPJ55_RS15005 PF00294 pfkB family carbohydrate kinase EPJ55_RS15005 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) EPJ55_RS15010 PF00356 Bacterial regulatory proteins, lacI family EPJ55_RS15025 PF00171 Aldehyde dehydrogenase family EPJ55_RS15025 PF00465 Iron-containing alcohol dehydrogenase EPJ55_RS15035 PF03551 Transcriptional regulator PadR-like family EPJ55_RS15035 PF10400 Virulence activator alpha C-term EPJ55_RS15040 PF05870 Phenolic acid decarboxylase (PAD) EPJ55_RS15055 PF02645 Uncharacterised protein, DegV family COG1307 EPJ55_RS15065 PF03051 Peptidase C1-like family EPJ55_RS15070 PF10502 Signal peptidase, peptidase S26 EPJ55_RS15095 PF13932 GidA associated domain EPJ55_RS15095 PF01134 Glucose inhibited division protein A EPJ55_RS15100 PF12631 MnmE helical domain EPJ55_RS15100 PF10396 GTP-binding protein TrmE N-terminus EPJ55_RS15100 PF01926 50S ribosome-binding GTPase EPJ55_RS15105 PF14804 Jag N-terminus EPJ55_RS15105 PF01424 R3H domain EPJ55_RS15110 PF02096 60Kd inner membrane protein EPJ55_RS15115 PF00825 Ribonuclease P EPJ55_RS15120 PF00468 Ribosomal protein L34