locus-tag class description JH395_RS00005 PF11638 DnaA N-terminal domain JH395_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix JH395_RS00005 PF00308 Bacterial dnaA protein JH395_RS00010 PF02767 DNA polymerase III beta subunit, central domain JH395_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JH395_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JH395_RS00020 PF02463 RecF/RecN/SMC N terminal domain JH395_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus JH395_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH395_RS00025 PF01751 Toprim domain JH395_RS00025 PF00204 DNA gyrase B JH395_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A JH395_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller JH395_RS00035 PF01250 Ribosomal protein S6 JH395_RS00040 PF00436 Single-strand binding protein family JH395_RS00045 PF01084 Ribosomal protein S18 JH395_RS00050 PF02272 DHHA1 domain JH395_RS00050 PF01368 DHH family JH395_RS00055 PF01281 Ribosomal protein L9, N-terminal domain JH395_RS00055 PF03948 Ribosomal protein L9, C-terminal domain JH395_RS00060 PF03796 DnaB-like helicase C terminal domain JH395_RS00060 PF00772 DnaB-like helicase N terminal domain JH395_RS00065 PF07690 Major Facilitator Superfamily JH395_RS00070 PF00696 Amino acid kinase family JH395_RS00075 PF00171 Aldehyde dehydrogenase family JH395_RS00080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JH395_RS00085 PF02806 Alpha amylase, C-terminal all-beta domain JH395_RS00085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JH395_RS00085 PF00128 Alpha amylase, catalytic domain JH395_RS00090 PF00483 Nucleotidyl transferase JH395_RS00095 PF00483 Nucleotidyl transferase JH395_RS00100 PF08323 Starch synthase catalytic domain JH395_RS00100 PF00534 Glycosyl transferases group 1 JH395_RS00105 PF00343 Carbohydrate phosphorylase JH395_RS00110 PF02903 Alpha amylase, N-terminal ig-like domain JH395_RS00110 PF00128 Alpha amylase, catalytic domain JH395_RS00125 PF03633 Glycosyl hydrolase family 65, C-terminal domain JH395_RS00125 PF03632 Glycosyl hydrolase family 65 central catalytic domain JH395_RS00125 PF03636 Glycosyl hydrolase family 65, N-terminal domain JH395_RS00135 PF00313 'Cold-shock' DNA-binding domain JH395_RS00150 PF00072 Response regulator receiver domain JH395_RS00150 PF00486 Transcriptional regulatory protein, C terminal JH395_RS00155 PF00512 His Kinase A (phospho-acceptor) domain JH395_RS00155 PF13426 PAS domain JH395_RS00155 PF14827 Double sensory domain of two-component sensor kinase JH395_RS00155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH395_RS00155 PF00672 HAMP domain JH395_RS00165 PF09648 YycH protein JH395_RS00170 PF00753 Metallo-beta-lactamase superfamily JH395_RS00175 PF13180 PDZ domain JH395_RS00180 PF02590 Predicted SPOUT methyltransferase JH395_RS00205 PF00004 ATPase family associated with various cellular activities (AAA) JH395_RS00205 PF17866 AAA lid domain JH395_RS00220 PF00171 Aldehyde dehydrogenase family JH395_RS00230 PF03167 Uracil DNA glycosylase superfamily JH395_RS00255 PF03358 NADPH-dependent FMN reductase JH395_RS00255 PF00890 FAD binding domain JH395_RS00255 PF04205 FMN-binding domain JH395_RS00260 PF00939 Sodium:sulfate symporter transmembrane region JH395_RS00275 PF01451 Low molecular weight phosphotyrosine protein phosphatase JH395_RS00290 PF00881 Nitroreductase family JH395_RS00295 PF17853 GGDEF-like domain JH395_RS00295 PF13556 PucR C-terminal helix-turn-helix domain JH395_RS00295 PF07905 Purine catabolism regulatory protein-like family JH395_RS00300 PF13419 Haloacid dehalogenase-like hydrolase JH395_RS00305 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JH395_RS00315 PF13350 Tyrosine phosphatase family JH395_RS00320 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JH395_RS00320 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JH395_RS00340 PF02525 Flavodoxin-like fold JH395_RS00345 PF03764 Elongation factor G, domain IV JH395_RS00345 PF14492 Elongation Factor G, domain II JH395_RS00345 PF00009 Elongation factor Tu GTP binding domain JH395_RS00345 PF00679 Elongation factor G C-terminus JH395_RS00370 PF00107 Zinc-binding dehydrogenase JH395_RS00370 PF08240 Alcohol dehydrogenase GroES-like domain JH395_RS00380 PF01554 MatE JH395_RS00390 PF00561 alpha/beta hydrolase fold JH395_RS00395 PF03883 Peroxide stress protein YaaA JH395_RS00405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JH395_RS00430 PF00005 ABC transporter JH395_RS00435 PF02361 Cobalt transport protein JH395_RS00440 PF13190 PDGLE domain JH395_RS00440 PF01891 Cobalt uptake substrate-specific transmembrane region JH395_RS00445 PF13545 Crp-like helix-turn-helix domain JH395_RS00450 PF09861 Lactate racemase N-terminal domain JH395_RS00455 PF00731 AIR carboxylase JH395_RS00460 PF01969 Protein of unknown function DUF111 JH395_RS00465 PF01969 Protein of unknown function DUF111 JH395_RS00470 PF00230 Major intrinsic protein JH395_RS00475 PF02540 NAD synthase JH395_RS00480 PF00107 Zinc-binding dehydrogenase JH395_RS00480 PF08240 Alcohol dehydrogenase GroES-like domain JH395_RS00485 PF02110 Hydroxyethylthiazole kinase family JH395_RS00490 PF08543 Phosphomethylpyrimidine kinase JH395_RS00495 PF02581 Thiamine monophosphate synthase JH395_RS00505 PF07722 Peptidase C26 JH395_RS00515 PF00293 NUDIX domain JH395_RS00515 PF13344 Haloacid dehalogenase-like hydrolase JH395_RS00520 PF00324 Amino acid permease JH395_RS00530 PF00561 alpha/beta hydrolase fold JH395_RS00535 PF00690 Cation transporter/ATPase, N-terminus JH395_RS00535 PF00689 Cation transporting ATPase, C-terminus JH395_RS00540 PF04024 PspC domain JH395_RS00555 PF00011 Hsp20/alpha crystallin family JH395_RS00570 PF00083 Sugar (and other) transporter JH395_RS00570 PF07690 Major Facilitator Superfamily JH395_RS00580 PF07690 Major Facilitator Superfamily JH395_RS00585 PF00248 Aldo/keto reductase family JH395_RS00590 PF00248 Aldo/keto reductase family JH395_RS00600 PF06100 MCRA family JH395_RS00615 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JH395_RS00620 PF02361 Cobalt transport protein JH395_RS00625 PF00005 ABC transporter JH395_RS00625 PF12558 ATP-binding cassette cobalt transporter JH395_RS00630 PF07155 ECF-type riboflavin transporter, S component JH395_RS00640 PF00392 Bacterial regulatory proteins, gntR family JH395_RS00640 PF07702 UTRA domain JH395_RS00665 PF00106 short chain dehydrogenase JH395_RS00670 PF13732 Domain of unknown function (DUF4162) JH395_RS00670 PF00005 ABC transporter JH395_RS00685 PF01012 Electron transfer flavoprotein domain JH395_RS00685 PF00766 Electron transfer flavoprotein FAD-binding domain JH395_RS00690 PF12822 ECF transporter, substrate-specific component JH395_RS00695 PF00440 Bacterial regulatory proteins, tetR family JH395_RS00695 PF14278 Transcriptional regulator C-terminal region JH395_RS00700 PF02733 Dak1 domain JH395_RS00705 PF02733 Dak1 domain JH395_RS00710 PF02734 DAK2 domain JH395_RS00715 PF03610 PTS system fructose IIA component JH395_RS00720 PF00230 Major intrinsic protein JH395_RS00725 PF00356 Bacterial regulatory proteins, lacI family JH395_RS00730 PF00356 Bacterial regulatory proteins, lacI family JH395_RS00735 PF00128 Alpha amylase, catalytic domain JH395_RS00740 PF13416 Bacterial extracellular solute-binding protein JH395_RS00745 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS00750 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS00760 PF00128 Alpha amylase, catalytic domain JH395_RS00760 PF11896 Domain of unknown function (DUF3416) JH395_RS00765 PF00005 ABC transporter JH395_RS00765 PF17912 MalK OB fold domain JH395_RS00765 PF03459 TOBE domain JH395_RS00770 PF03636 Glycosyl hydrolase family 65, N-terminal domain JH395_RS00770 PF03632 Glycosyl hydrolase family 65 central catalytic domain JH395_RS00770 PF03633 Glycosyl hydrolase family 65, C-terminal domain JH395_RS00785 PF00480 ROK family JH395_RS00790 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JH395_RS00790 PF00367 phosphotransferase system, EIIB JH395_RS00790 PF02378 Phosphotransferase system, EIIC JH395_RS00795 PF08244 Glycosyl hydrolases family 32 C terminal JH395_RS00795 PF00251 Glycosyl hydrolases family 32 N-terminal domain JH395_RS00800 PF00356 Bacterial regulatory proteins, lacI family JH395_RS00805 PF00128 Alpha amylase, catalytic domain JH395_RS00815 PF03553 Na+/H+ antiporter family JH395_RS00820 PF00128 Alpha amylase, catalytic domain JH395_RS00825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH395_RS00825 PF03466 LysR substrate binding domain JH395_RS00840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JH395_RS00845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JH395_RS00855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JH395_RS00855 PF01842 ACT domain JH395_RS00855 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JH395_RS00860 PF00266 Aminotransferase class-V JH395_RS00865 PF00300 Histidine phosphatase superfamily (branch 1) JH395_RS00870 PF00248 Aldo/keto reductase family JH395_RS00885 PF05670 NFACT protein RNA binding domain JH395_RS00890 PF00871 Acetokinase family JH395_RS00900 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JH395_RS00905 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JH395_RS00910 PF12848 ABC transporter JH395_RS00910 PF00005 ABC transporter JH395_RS00920 PF00005 ABC transporter JH395_RS00930 PF00255 Glutathione peroxidase JH395_RS00935 PF00248 Aldo/keto reductase family JH395_RS00940 PF01272 Transcription elongation factor, GreA/GreB, C-term JH395_RS00940 PF03449 Transcription elongation factor, N-terminal JH395_RS00955 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JH395_RS00960 PF03577 Peptidase family C69 JH395_RS00965 PF02378 Phosphotransferase system, EIIC JH395_RS00965 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JH395_RS00975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JH395_RS00980 PF08125 Mannitol dehydrogenase C-terminal domain JH395_RS00980 PF01232 Mannitol dehydrogenase Rossmann domain JH395_RS00990 PF00085 Thioredoxin JH395_RS01010 PF00334 Nucleoside diphosphate kinase JH395_RS01020 PF03358 NADPH-dependent FMN reductase JH395_RS01025 PF07702 UTRA domain JH395_RS01025 PF00392 Bacterial regulatory proteins, gntR family JH395_RS01030 PF02378 Phosphotransferase system, EIIC JH395_RS01045 PF01979 Amidohydrolase family JH395_RS01050 PF03841 L-seryl-tRNA selenium transferase JH395_RS01065 PF00132 Bacterial transferase hexapeptide (six repeats) JH395_RS01070 PF01053 Cys/Met metabolism PLP-dependent enzyme JH395_RS01075 PF00291 Pyridoxal-phosphate dependent enzyme JH395_RS01080 PF00557 Metallopeptidase family M24 JH395_RS01100 PF07702 UTRA domain JH395_RS01100 PF00392 Bacterial regulatory proteins, gntR family JH395_RS01105 PF16657 Maltogenic Amylase, C-terminal domain JH395_RS01105 PF00128 Alpha amylase, catalytic domain JH395_RS01110 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JH395_RS01110 PF00367 phosphotransferase system, EIIB JH395_RS01110 PF02378 Phosphotransferase system, EIIC JH395_RS01115 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JH395_RS01115 PF00367 phosphotransferase system, EIIB JH395_RS01115 PF02378 Phosphotransferase system, EIIC JH395_RS01125 PF02441 Flavoprotein JH395_RS01135 PF02082 Transcriptional regulator JH395_RS01140 PF00440 Bacterial regulatory proteins, tetR family JH395_RS01145 PF01566 Natural resistance-associated macrophage protein JH395_RS01165 PF07690 Major Facilitator Superfamily JH395_RS01175 PF18719 ArlS sensor domain JH395_RS01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH395_RS01175 PF00512 His Kinase A (phospho-acceptor) domain JH395_RS01180 PF00072 Response regulator receiver domain JH395_RS01180 PF00486 Transcriptional regulatory protein, C terminal JH395_RS01190 PF01418 Helix-turn-helix domain, rpiR family JH395_RS01190 PF01380 SIS domain JH395_RS01195 PF02378 Phosphotransferase system, EIIC JH395_RS01210 PF03816 Cell envelope-related transcriptional attenuator domain JH395_RS01215 PF01565 FAD binding domain JH395_RS01215 PF02913 FAD linked oxidases, C-terminal domain JH395_RS01225 PF04607 Region found in RelA / SpoT proteins JH395_RS01235 PF03176 MMPL family JH395_RS01240 PF03352 Methyladenine glycosylase JH395_RS01250 PF12704 MacB-like periplasmic core domain JH395_RS01250 PF02687 FtsX-like permease family JH395_RS01255 PF00005 ABC transporter JH395_RS01270 PF06737 Transglycosylase-like domain JH395_RS01275 PF05257 CHAP domain JH395_RS01275 PF01476 LysM domain JH395_RS01305 PF00871 Acetokinase family JH395_RS01315 PF01047 MarR family JH395_RS01320 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH395_RS01345 PF13416 Bacterial extracellular solute-binding protein JH395_RS01360 PF08402 TOBE domain JH395_RS01360 PF00005 ABC transporter JH395_RS01390 PF00392 Bacterial regulatory proteins, gntR family JH395_RS01395 PF00005 ABC transporter JH395_RS01405 PF00171 Aldehyde dehydrogenase family JH395_RS01405 PF00465 Iron-containing alcohol dehydrogenase JH395_RS01410 PF01116 Fructose-bisphosphate aldolase class-II JH395_RS01430 PF03577 Peptidase family C69 JH395_RS01440 PF02632 BioY family JH395_RS01450 PF03180 NLPA lipoprotein JH395_RS01455 PF09383 NIL domain JH395_RS01455 PF00005 ABC transporter JH395_RS01460 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS01465 PF02558 Ketopantoate reductase PanE/ApbA JH395_RS01465 PF08546 Ketopantoate reductase PanE/ApbA C terminal JH395_RS01470 PF00155 Aminotransferase class I and II JH395_RS01480 PF01061 ABC-2 type transporter JH395_RS01485 PF00005 ABC transporter JH395_RS01500 PF07690 Major Facilitator Superfamily JH395_RS01505 PF00909 Ammonium Transporter Family JH395_RS01510 PF00056 lactate/malate dehydrogenase, NAD binding domain JH395_RS01510 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JH395_RS01525 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JH395_RS01530 PF07732 Multicopper oxidase JH395_RS01530 PF07731 Multicopper oxidase JH395_RS01535 PF06993 Protein of unknown function (DUF1304) JH395_RS01540 PF01161 Phosphatidylethanolamine-binding protein JH395_RS01565 PF01156 Inosine-uridine preferring nucleoside hydrolase JH395_RS01570 PF00106 short chain dehydrogenase JH395_RS01580 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS01585 PF00005 ABC transporter JH395_RS01590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JH395_RS01590 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH395_RS01595 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JH395_RS01595 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JH395_RS01600 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JH395_RS01600 PF01266 FAD dependent oxidoreductase JH395_RS01605 PF00230 Major intrinsic protein JH395_RS01660 PF00132 Bacterial transferase hexapeptide (six repeats) JH395_RS01660 PF12464 Maltose acetyltransferase JH395_RS01675 PF12833 Helix-turn-helix domain JH395_RS01675 PF02311 AraC-like ligand binding domain JH395_RS01685 PF05525 Branched-chain amino acid transport protein JH395_RS01690 PF00999 Sodium/hydrogen exchanger family JH395_RS01725 PF00535 Glycosyl transferase family 2 JH395_RS01745 PF00072 Response regulator receiver domain JH395_RS01745 PF04397 LytTr DNA-binding domain JH395_RS01755 PF13936 Helix-turn-helix domain JH395_RS01755 PF00665 Integrase core domain JH395_RS01775 PF00664 ABC transporter transmembrane region JH395_RS01775 PF00005 ABC transporter JH395_RS01775 PF03412 Peptidase C39 family JH395_RS01810 PF13538 UvrD-like helicase C-terminal domain JH395_RS01815 PF00795 Carbon-nitrogen hydrolase JH395_RS01820 PF00579 tRNA synthetases class I (W and Y) JH395_RS01825 PF07702 UTRA domain JH395_RS01825 PF00392 Bacterial regulatory proteins, gntR family JH395_RS01830 PF02378 Phosphotransferase system, EIIC JH395_RS01845 PF02378 Phosphotransferase system, EIIC JH395_RS01850 PF00232 Glycosyl hydrolase family 1 JH395_RS01855 PF00480 ROK family JH395_RS01860 PF01418 Helix-turn-helix domain, rpiR family JH395_RS01860 PF01380 SIS domain JH395_RS01865 PF01207 Dihydrouridine synthase (Dus) JH395_RS01880 PF02541 Ppx/GppA phosphatase family JH395_RS01885 PF00368 Hydroxymethylglutaryl-coenzyme A reductase JH395_RS01895 PF02146 Sir2 family JH395_RS01900 PF01904 Protein of unknown function DUF72 JH395_RS01910 PF08264 Anticodon-binding domain of tRNA JH395_RS01910 PF01588 Putative tRNA binding domain JH395_RS01910 PF09334 tRNA synthetases class I (M) JH395_RS01915 PF07690 Major Facilitator Superfamily JH395_RS01920 PF01026 TatD related DNase JH395_RS01925 PF13331 Domain of unknown function (DUF4093) JH395_RS01930 PF00398 Ribosomal RNA adenine dimethylase JH395_RS01935 PF06257 Biofilm formation stimulator VEG JH395_RS01940 PF08544 GHMP kinases C terminal JH395_RS01940 PF00288 GHMP kinases N terminal domain JH395_RS01945 PF12146 Serine aminopeptidase, S33 JH395_RS01950 PF00005 ABC transporter JH395_RS01955 PF00950 ABC 3 transport family JH395_RS01980 PF00156 Phosphoribosyl transferase domain JH395_RS01980 PF09182 Bacterial purine repressor, N-terminal JH395_RS01985 PF00483 Nucleotidyl transferase JH395_RS01985 PF00132 Bacterial transferase hexapeptide (six repeats) JH395_RS01995 PF14572 Phosphoribosyl synthetase-associated domain JH395_RS01995 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JH395_RS02000 PF13936 Helix-turn-helix domain JH395_RS02000 PF00665 Integrase core domain JH395_RS02020 PF08951 Enterocin A Immunity JH395_RS02025 PF01475 Ferric uptake regulator family JH395_RS02040 PF04205 FMN-binding domain JH395_RS02040 PF03358 NADPH-dependent FMN reductase JH395_RS02040 PF00890 FAD binding domain JH395_RS02055 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JH395_RS02055 PF00367 phosphotransferase system, EIIB JH395_RS02055 PF02378 Phosphotransferase system, EIIC JH395_RS02070 PF05043 Mga helix-turn-helix domain JH395_RS02070 PF08279 HTH domain JH395_RS02070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JH395_RS02070 PF00874 PRD domain JH395_RS02075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JH395_RS02075 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JH395_RS02080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JH395_RS02085 PF02378 Phosphotransferase system, EIIC JH395_RS02085 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JH395_RS02085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JH395_RS02090 PF09261 Alpha mannosidase middle domain JH395_RS02090 PF01074 Glycosyl hydrolases family 38 N-terminal domain JH395_RS02090 PF07748 Glycosyl hydrolases family 38 C-terminal domain JH395_RS02095 PF00480 ROK family JH395_RS02115 PF01938 TRAM domain JH395_RS02115 PF05958 tRNA (Uracil-5-)-methyltransferase JH395_RS02120 PF00005 ABC transporter JH395_RS02125 PF03649 Uncharacterised protein family (UPF0014) JH395_RS02135 PF00356 Bacterial regulatory proteins, lacI family JH395_RS02140 PF00128 Alpha amylase, catalytic domain JH395_RS02145 PF02378 Phosphotransferase system, EIIC JH395_RS02145 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JH395_RS02145 PF00367 phosphotransferase system, EIIB JH395_RS02170 PF00497 Bacterial extracellular solute-binding proteins, family 3 JH395_RS02175 PF00005 ABC transporter JH395_RS02180 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS02185 PF00497 Bacterial extracellular solute-binding proteins, family 3 JH395_RS02190 PF00155 Aminotransferase class I and II JH395_RS02195 PF03466 LysR substrate binding domain JH395_RS02195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH395_RS02210 PF01773 Na+ dependent nucleoside transporter N-terminus JH395_RS02210 PF07662 Na+ dependent nucleoside transporter C-terminus JH395_RS02215 PF02527 rRNA small subunit methyltransferase G JH395_RS02220 PF17762 HTH domain found in ParB protein JH395_RS02220 PF02195 ParB-like nuclease domain JH395_RS02225 PF13614 AAA domain JH395_RS02230 PF02195 ParB-like nuclease domain JH395_RS02230 PF17762 HTH domain found in ParB protein JH395_RS02235 PF06107 Bacterial protein of unknown function (DUF951) JH395_RS02240 PF01926 50S ribosome-binding GTPase JH395_RS02240 PF06071 Protein of unknown function (DUF933) JH395_RS02250 PF00571 CBS domain JH395_RS02250 PF00478 IMP dehydrogenase / GMP reductase domain JH395_RS02265 PF00486 Transcriptional regulatory protein, C terminal JH395_RS02265 PF00072 Response regulator receiver domain JH395_RS02270 PF00512 His Kinase A (phospho-acceptor) domain JH395_RS02270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH395_RS02275 PF00768 D-alanyl-D-alanine carboxypeptidase JH395_RS02275 PF07943 Penicillin-binding protein 5, C-terminal domain JH395_RS02280 PF00583 Acetyltransferase (GNAT) family JH395_RS02315 PF03793 PASTA domain JH395_RS02315 PF00069 Protein kinase domain JH395_RS02340 PF00480 ROK family JH395_RS02345 PF01594 AI-2E family transporter JH395_RS02350 PF00300 Histidine phosphatase superfamily (branch 1) JH395_RS02360 PF00665 Integrase core domain JH395_RS02360 PF13333 Integrase core domain JH395_RS02360 PF13276 HTH-like domain JH395_RS02385 PF12464 Maltose acetyltransferase JH395_RS02385 PF14602 Hexapeptide repeat of succinyl-transferase JH395_RS02390 PF00106 short chain dehydrogenase JH395_RS02400 PF00440 Bacterial regulatory proteins, tetR family JH395_RS02405 PF01032 FecCD transport family JH395_RS02410 PF01032 FecCD transport family JH395_RS02415 PF00005 ABC transporter JH395_RS02420 PF01497 Periplasmic binding protein JH395_RS02430 PF07690 Major Facilitator Superfamily JH395_RS02435 PF00248 Aldo/keto reductase family JH395_RS02440 PF06736 Protein of unknown function (DUF1211) JH395_RS02455 PF00106 short chain dehydrogenase JH395_RS02460 PF01638 HxlR-like helix-turn-helix JH395_RS02475 PF00171 Aldehyde dehydrogenase family JH395_RS02485 PF00440 Bacterial regulatory proteins, tetR family JH395_RS02485 PF08359 YsiA-like protein, C-terminal region JH395_RS02495 PF04397 LytTr DNA-binding domain JH395_RS02495 PF00072 Response regulator receiver domain JH395_RS02500 PF00733 Asparagine synthase JH395_RS02500 PF13537 Glutamine amidotransferase domain JH395_RS02510 PF07690 Major Facilitator Superfamily JH395_RS02515 PF01638 HxlR-like helix-turn-helix JH395_RS02520 PF13419 Haloacid dehalogenase-like hydrolase JH395_RS02530 PF06458 MucBP domain JH395_RS02560 PF00107 Zinc-binding dehydrogenase JH395_RS02560 PF08240 Alcohol dehydrogenase GroES-like domain JH395_RS02615 PF00403 Heavy-metal-associated domain JH395_RS02620 PF08240 Alcohol dehydrogenase GroES-like domain JH395_RS02620 PF00107 Zinc-binding dehydrogenase JH395_RS02625 PF00465 Iron-containing alcohol dehydrogenase JH395_RS02635 PF13520 Amino acid permease JH395_RS02660 PF01546 Peptidase family M20/M25/M40 JH395_RS02660 PF07687 Peptidase dimerisation domain JH395_RS02670 PF00664 ABC transporter transmembrane region JH395_RS02670 PF00005 ABC transporter JH395_RS02675 PF00664 ABC transporter transmembrane region JH395_RS02675 PF00005 ABC transporter JH395_RS02720 PF00106 short chain dehydrogenase JH395_RS02730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH395_RS02730 PF03466 LysR substrate binding domain JH395_RS02735 PF00817 impB/mucB/samB family JH395_RS02735 PF11798 IMS family HHH motif JH395_RS02735 PF11799 impB/mucB/samB family C-terminal domain JH395_RS02745 PF00990 Diguanylate cyclase, GGDEF domain JH395_RS02760 PF01297 Zinc-uptake complex component A periplasmic JH395_RS02775 PF01464 Transglycosylase SLT domain JH395_RS02780 PF06737 Transglycosylase-like domain JH395_RS02785 PF13411 MerR HTH family regulatory protein JH395_RS02795 PF00232 Glycosyl hydrolase family 1 JH395_RS02800 PF02378 Phosphotransferase system, EIIC JH395_RS02805 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JH395_RS02840 PF02687 FtsX-like permease family JH395_RS02840 PF00005 ABC transporter JH395_RS02840 PF12704 MacB-like periplasmic core domain JH395_RS02850 PF01022 Bacterial regulatory protein, arsR family JH395_RS02870 PF01566 Natural resistance-associated macrophage protein JH395_RS02880 PF04138 GtrA-like protein JH395_RS02885 PF00413 Matrixin JH395_RS02895 PF13458 Periplasmic binding protein JH395_RS02905 PF11862 Domain of unknown function (DUF3382) JH395_RS02905 PF02653 Branched-chain amino acid transport system / permease component JH395_RS02910 PF12399 Branched-chain amino acid ATP-binding cassette transporter JH395_RS02910 PF00005 ABC transporter JH395_RS02915 PF00005 ABC transporter JH395_RS02920 PF02272 DHHA1 domain JH395_RS02920 PF00571 CBS domain JH395_RS02920 PF01368 DHH family JH395_RS02920 PF12627 Probable RNA and SrmB- binding site of polymerase A JH395_RS02920 PF01743 Poly A polymerase head domain JH395_RS02950 PF02653 Branched-chain amino acid transport system / permease component JH395_RS02955 PF00005 ABC transporter JH395_RS02960 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JH395_RS02960 PF00367 phosphotransferase system, EIIB JH395_RS02960 PF02378 Phosphotransferase system, EIIC JH395_RS02965 PF00881 Nitroreductase family JH395_RS02975 PF00664 ABC transporter transmembrane region JH395_RS02975 PF00005 ABC transporter JH395_RS02980 PF00480 ROK family JH395_RS03005 PF00892 EamA-like transporter family JH395_RS03050 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JH395_RS03055 PF00939 Sodium:sulfate symporter transmembrane region JH395_RS03060 PF03466 LysR substrate binding domain JH395_RS03060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH395_RS03075 PF01207 Dihydrouridine synthase (Dus) JH395_RS03080 PF02424 ApbE family JH395_RS03085 PF01327 Polypeptide deformylase JH395_RS03095 PF03477 ATP cone domain JH395_RS03095 PF13597 Anaerobic ribonucleoside-triphosphate reductase JH395_RS03105 PF00563 EAL domain JH395_RS03105 PF12792 CSS motif domain associated with EAL JH395_RS03110 PF00990 Diguanylate cyclase, GGDEF domain JH395_RS03145 PF11700 Vacuole effluxer Atg22 like JH395_RS03160 PF17760 UvrA interaction domain JH395_RS03160 PF17755 UvrA DNA-binding domain JH395_RS03160 PF00005 ABC transporter JH395_RS03175 PF00005 ABC transporter JH395_RS03175 PF12848 ABC transporter JH395_RS03200 PF01223 DNA/RNA non-specific endonuclease JH395_RS03205 PF01022 Bacterial regulatory protein, arsR family JH395_RS03225 PF07690 Major Facilitator Superfamily JH395_RS03230 PF00005 ABC transporter JH395_RS03230 PF00664 ABC transporter transmembrane region JH395_RS03235 PF00664 ABC transporter transmembrane region JH395_RS03235 PF00005 ABC transporter JH395_RS03240 PF00248 Aldo/keto reductase family JH395_RS03250 PF00155 Aminotransferase class I and II JH395_RS03265 PF13419 Haloacid dehalogenase-like hydrolase JH395_RS03270 PF12464 Maltose acetyltransferase JH395_RS03270 PF14602 Hexapeptide repeat of succinyl-transferase JH395_RS03275 PF00582 Universal stress protein family JH395_RS03290 PF08240 Alcohol dehydrogenase GroES-like domain JH395_RS03290 PF00107 Zinc-binding dehydrogenase JH395_RS03300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH395_RS03300 PF03466 LysR substrate binding domain JH395_RS03325 PF00583 Acetyltransferase (GNAT) family JH395_RS03335 PF10502 Signal peptidase, peptidase S26 JH395_RS03340 PF10502 Signal peptidase, peptidase S26 JH395_RS03345 PF14602 Hexapeptide repeat of succinyl-transferase JH395_RS03345 PF12464 Maltose acetyltransferase JH395_RS03350 PF00633 Helix-hairpin-helix motif JH395_RS03350 PF00730 HhH-GPD superfamily base excision DNA repair protein JH395_RS03355 PF00005 ABC transporter JH395_RS03365 PF07687 Peptidase dimerisation domain JH395_RS03365 PF01546 Peptidase family M20/M25/M40 JH395_RS03370 PF13411 MerR HTH family regulatory protein JH395_RS03385 PF00106 short chain dehydrogenase JH395_RS03395 PF00005 ABC transporter JH395_RS03395 PF13732 Domain of unknown function (DUF4162) JH395_RS03400 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JH395_RS03400 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JH395_RS03415 PF13439 Glycosyltransferase Family 4 JH395_RS03420 PF00534 Glycosyl transferases group 1 JH395_RS03420 PF13439 Glycosyltransferase Family 4 JH395_RS03425 PF03466 LysR substrate binding domain JH395_RS03425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH395_RS03430 PF03601 Conserved hypothetical protein 698 JH395_RS03435 PF13302 Acetyltransferase (GNAT) domain JH395_RS03445 PF07690 Major Facilitator Superfamily JH395_RS03455 PF07690 Major Facilitator Superfamily JH395_RS03460 PF10415 Fumarase C C-terminus JH395_RS03460 PF00206 Lyase JH395_RS03475 PF00999 Sodium/hydrogen exchanger family JH395_RS03485 PF01156 Inosine-uridine preferring nucleoside hydrolase JH395_RS03495 PF00005 ABC transporter JH395_RS03500 PF02687 FtsX-like permease family JH395_RS03510 PF00375 Sodium:dicarboxylate symporter family JH395_RS03515 PF13411 MerR HTH family regulatory protein JH395_RS03515 PF06445 GyrI-like small molecule binding domain JH395_RS03520 PF04474 Protein of unknown function (DUF554) JH395_RS03535 PF13529 Peptidase_C39 like family JH395_RS03550 PF00579 tRNA synthetases class I (W and Y) JH395_RS03550 PF01479 S4 domain JH395_RS03555 PF07155 ECF-type riboflavin transporter, S component JH395_RS03585 PF00248 Aldo/keto reductase family JH395_RS03590 PF00248 Aldo/keto reductase family JH395_RS03600 PF13520 Amino acid permease JH395_RS03605 PF01487 Type I 3-dehydroquinase JH395_RS03625 PF00258 Flavodoxin JH395_RS03640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JH395_RS03645 PF00892 EamA-like transporter family JH395_RS03650 PF02558 Ketopantoate reductase PanE/ApbA JH395_RS03650 PF08546 Ketopantoate reductase PanE/ApbA C terminal JH395_RS03665 PF00300 Histidine phosphatase superfamily (branch 1) JH395_RS03670 PF00535 Glycosyl transferase family 2 JH395_RS03675 PF00392 Bacterial regulatory proteins, gntR family JH395_RS03675 PF07702 UTRA domain JH395_RS03680 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JH395_RS03685 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JH395_RS03690 PF00232 Glycosyl hydrolase family 1 JH395_RS03695 PF00232 Glycosyl hydrolase family 1 JH395_RS03700 PF00291 Pyridoxal-phosphate dependent enzyme JH395_RS03705 PF00005 ABC transporter JH395_RS03715 PF00440 Bacterial regulatory proteins, tetR family JH395_RS03720 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JH395_RS03720 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JH395_RS03720 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JH395_RS03725 PF02829 3H domain JH395_RS03725 PF08279 HTH domain JH395_RS03755 PF00293 NUDIX domain JH395_RS03760 PF12464 Maltose acetyltransferase JH395_RS03760 PF00132 Bacterial transferase hexapeptide (six repeats) JH395_RS03775 PF14821 Threonine synthase N terminus JH395_RS03775 PF00291 Pyridoxal-phosphate dependent enzyme JH395_RS03780 PF02903 Alpha amylase, N-terminal ig-like domain JH395_RS03780 PF00128 Alpha amylase, catalytic domain JH395_RS03800 PF00155 Aminotransferase class I and II JH395_RS03820 PF04138 GtrA-like protein JH395_RS03830 PF00582 Universal stress protein family JH395_RS03840 PF00005 ABC transporter JH395_RS03845 PF00392 Bacterial regulatory proteins, gntR family JH395_RS03860 PF00005 ABC transporter JH395_RS03865 PF17763 Glutaminase/Asparaginase C-terminal domain JH395_RS03865 PF00710 Asparaginase, N-terminal JH395_RS03880 PF13350 Tyrosine phosphatase family JH395_RS03885 PF10437 Bacterial lipoate protein ligase C-terminus JH395_RS03885 PF03099 Biotin/lipoate A/B protein ligase family JH395_RS03890 PF04205 FMN-binding domain JH395_RS03890 PF00890 FAD binding domain JH395_RS03890 PF03358 NADPH-dependent FMN reductase JH395_RS03895 PF00890 FAD binding domain JH395_RS03895 PF04205 FMN-binding domain JH395_RS03895 PF03358 NADPH-dependent FMN reductase JH395_RS03900 PF00731 AIR carboxylase JH395_RS03905 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JH395_RS03905 PF02222 ATP-grasp domain JH395_RS03910 PF01259 SAICAR synthetase JH395_RS03915 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JH395_RS03925 PF02769 AIR synthase related protein, C-terminal domain JH395_RS03925 PF00586 AIR synthase related protein, N-terminal domain JH395_RS03925 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JH395_RS03930 PF13537 Glutamine amidotransferase domain JH395_RS03930 PF00156 Phosphoribosyl transferase domain JH395_RS03935 PF02769 AIR synthase related protein, C-terminal domain JH395_RS03935 PF00586 AIR synthase related protein, N-terminal domain JH395_RS03940 PF00551 Formyl transferase JH395_RS03945 PF02142 MGS-like domain JH395_RS03945 PF01808 AICARFT/IMPCHase bienzyme JH395_RS03950 PF02844 Phosphoribosylglycinamide synthetase, N domain JH395_RS03950 PF02843 Phosphoribosylglycinamide synthetase, C domain JH395_RS03950 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JH395_RS03960 PF00535 Glycosyl transferase family 2 JH395_RS03980 PF00860 Permease family JH395_RS03985 PF00860 Permease family JH395_RS03990 PF07905 Purine catabolism regulatory protein-like family JH395_RS03990 PF17853 GGDEF-like domain JH395_RS03990 PF13556 PucR C-terminal helix-turn-helix domain JH395_RS03995 PF00156 Phosphoribosyl transferase domain JH395_RS04000 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JH395_RS04000 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JH395_RS04005 PF01979 Amidohydrolase family JH395_RS04010 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JH395_RS04010 PF00117 Glutamine amidotransferase class-I JH395_RS04015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JH395_RS04015 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JH395_RS04015 PF02142 MGS-like domain JH395_RS04020 PF01180 Dihydroorotate dehydrogenase JH395_RS04025 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JH395_RS04030 PF00156 Phosphoribosyl transferase domain JH395_RS04040 PF12705 PD-(D/E)XK nuclease superfamily JH395_RS04045 PF00580 UvrD/REP helicase N-terminal domain JH395_RS04045 PF13361 UvrD-like helicase C-terminal domain JH395_RS04045 PF12705 PD-(D/E)XK nuclease superfamily JH395_RS04055 PF13460 NAD(P)H-binding JH395_RS04060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH395_RS04060 PF03466 LysR substrate binding domain JH395_RS04070 PF00701 Dihydrodipicolinate synthetase family JH395_RS04075 PF00155 Aminotransferase class I and II JH395_RS04080 PF00155 Aminotransferase class I and II JH395_RS04080 PF00392 Bacterial regulatory proteins, gntR family JH395_RS04085 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JH395_RS04085 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JH395_RS04095 PF08240 Alcohol dehydrogenase GroES-like domain JH395_RS04095 PF00107 Zinc-binding dehydrogenase JH395_RS04100 PF07739 TipAS antibiotic-recognition domain JH395_RS04100 PF13411 MerR HTH family regulatory protein JH395_RS04105 PF07690 Major Facilitator Superfamily JH395_RS04110 PF00999 Sodium/hydrogen exchanger family JH395_RS04115 PF07972 NrdI Flavodoxin like JH395_RS04120 PF00571 CBS domain JH395_RS04120 PF03471 Transporter associated domain JH395_RS04120 PF01595 Cyclin M transmembrane N-terminal domain JH395_RS04150 PF01966 HD domain JH395_RS04160 PF04073 Aminoacyl-tRNA editing domain JH395_RS04165 PF00392 Bacterial regulatory proteins, gntR family JH395_RS04165 PF07702 UTRA domain JH395_RS04170 PF00756 Putative esterase JH395_RS04175 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase JH395_RS04175 PF09363 XFP C-terminal domain JH395_RS04175 PF09364 XFP N-terminal domain JH395_RS04180 PF00534 Glycosyl transferases group 1 JH395_RS04190 PF01381 Helix-turn-helix JH395_RS04190 PF08671 Anti-repressor SinI JH395_RS04215 PF01479 S4 domain JH395_RS04215 PF00849 RNA pseudouridylate synthase JH395_RS04220 PF00582 Universal stress protein family JH395_RS04225 PF13457 GW (Gly-Tryp) dipeptide domain JH395_RS04225 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JH395_RS04230 PF03099 Biotin/lipoate A/B protein ligase family JH395_RS04230 PF10437 Bacterial lipoate protein ligase C-terminus JH395_RS04260 PF01053 Cys/Met metabolism PLP-dependent enzyme JH395_RS04265 PF00085 Thioredoxin JH395_RS04270 PF00326 Prolyl oligopeptidase family JH395_RS04280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JH395_RS04280 PF00205 Thiamine pyrophosphate enzyme, central domain JH395_RS04280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JH395_RS04320 PF00392 Bacterial regulatory proteins, gntR family JH395_RS04325 PF00005 ABC transporter JH395_RS04335 PF00857 Isochorismatase family JH395_RS04345 PF00999 Sodium/hydrogen exchanger family JH395_RS04350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JH395_RS04350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JH395_RS04355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JH395_RS04355 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JH395_RS04360 PF01380 SIS domain JH395_RS04360 PF01418 Helix-turn-helix domain, rpiR family JH395_RS04365 PF00356 Bacterial regulatory proteins, lacI family JH395_RS04365 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JH395_RS04370 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JH395_RS04375 PF00075 RNase H JH395_RS04380 PF01156 Inosine-uridine preferring nucleoside hydrolase JH395_RS04385 PF00881 Nitroreductase family JH395_RS04390 PF03976 Polyphosphate kinase 2 (PPK2) JH395_RS04405 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH395_RS04410 PF03009 Glycerophosphoryl diester phosphodiesterase family JH395_RS04415 PF00884 Sulfatase JH395_RS04435 PF06736 Protein of unknown function (DUF1211) JH395_RS04450 PF01118 Semialdehyde dehydrogenase, NAD binding domain JH395_RS04450 PF02774 Semialdehyde dehydrogenase, dimerisation domain JH395_RS04460 PF00106 short chain dehydrogenase JH395_RS04465 PF13411 MerR HTH family regulatory protein JH395_RS04485 PF02811 PHP domain JH395_RS04490 PF13393 Histidyl-tRNA synthetase JH395_RS04495 PF01634 ATP phosphoribosyltransferase JH395_RS04500 PF00815 Histidinol dehydrogenase JH395_RS04505 PF00475 Imidazoleglycerol-phosphate dehydratase JH395_RS04510 PF00117 Glutamine amidotransferase class-I JH395_RS04515 PF00977 Histidine biosynthesis protein JH395_RS04520 PF00977 Histidine biosynthesis protein JH395_RS04525 PF01502 Phosphoribosyl-AMP cyclohydrolase JH395_RS04530 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JH395_RS04535 PF00155 Aminotransferase class I and II JH395_RS04540 PF12464 Maltose acetyltransferase JH395_RS04540 PF14602 Hexapeptide repeat of succinyl-transferase JH395_RS04545 PF03741 Integral membrane protein TerC family JH395_RS04550 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JH395_RS04550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JH395_RS04555 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH395_RS04555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JH395_RS04560 PF00005 ABC transporter JH395_RS04565 PF02653 Branched-chain amino acid transport system / permease component JH395_RS04575 PF04204 Homoserine O-succinyltransferase JH395_RS04580 PF01053 Cys/Met metabolism PLP-dependent enzyme JH395_RS04585 PF03447 Homoserine dehydrogenase, NAD binding domain JH395_RS04585 PF00742 Homoserine dehydrogenase JH395_RS04590 PF02645 Uncharacterised protein, DegV family COG1307 JH395_RS04595 PF02558 Ketopantoate reductase PanE/ApbA JH395_RS04595 PF08546 Ketopantoate reductase PanE/ApbA C terminal JH395_RS04600 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JH395_RS04600 PF00367 phosphotransferase system, EIIB JH395_RS04600 PF02378 Phosphotransferase system, EIIC JH395_RS04610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JH395_RS04620 PF00005 ABC transporter JH395_RS04620 PF12848 ABC transporter JH395_RS04625 PF00990 Diguanylate cyclase, GGDEF domain JH395_RS04640 PF01037 Lrp/AsnC ligand binding domain JH395_RS04645 PF00877 NlpC/P60 family JH395_RS04665 PF07690 Major Facilitator Superfamily JH395_RS04685 PF00892 EamA-like transporter family JH395_RS04695 PF05167 Uncharacterised ACR (DUF711) JH395_RS04700 PF00072 Response regulator receiver domain JH395_RS04700 PF00486 Transcriptional regulatory protein, C terminal JH395_RS04705 PF00672 HAMP domain JH395_RS04705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH395_RS04705 PF00512 His Kinase A (phospho-acceptor) domain JH395_RS04710 PF17785 PUA-like domain JH395_RS04710 PF10672 S-adenosylmethionine-dependent methyltransferase JH395_RS04715 PF06800 Sugar transport protein JH395_RS04720 PF00342 Phosphoglucose isomerase JH395_RS04730 PF00005 ABC transporter JH395_RS04730 PF02687 FtsX-like permease family JH395_RS04730 PF12704 MacB-like periplasmic core domain JH395_RS04740 PF00005 ABC transporter JH395_RS04740 PF00664 ABC transporter transmembrane region JH395_RS04750 PF06458 MucBP domain JH395_RS04790 PF02899 Phage integrase, N-terminal SAM-like domain JH395_RS04790 PF00589 Phage integrase family JH395_RS04805 PF13614 AAA domain JH395_RS04860 PF01381 Helix-turn-helix JH395_RS05005 PF04327 Cysteine protease Prp JH395_RS05120 PF01522 Polysaccharide deacetylase JH395_RS05130 PF00664 ABC transporter transmembrane region JH395_RS05130 PF00005 ABC transporter JH395_RS05135 PF00005 ABC transporter JH395_RS05135 PF00664 ABC transporter transmembrane region JH395_RS05150 PF01063 Amino-transferase class IV JH395_RS05160 PF00144 Beta-lactamase JH395_RS05165 PF01238 Phosphomannose isomerase type I JH395_RS05170 PF07685 CobB/CobQ-like glutamine amidotransferase domain JH395_RS05175 PF08245 Mur ligase middle domain JH395_RS05175 PF08353 Domain of unknown function (DUF1727) JH395_RS05180 PF00265 Thymidine kinase JH395_RS05185 PF00472 RF-1 domain JH395_RS05185 PF03462 PCRF domain JH395_RS05190 PF05175 Methyltransferase small domain JH395_RS05190 PF17827 PrmC N-terminal domain JH395_RS05195 PF03481 Putative GTP-binding controlling metal-binding JH395_RS05195 PF01300 Telomere recombination JH395_RS05200 PF00464 Serine hydroxymethyltransferase JH395_RS05215 PF00860 Permease family JH395_RS05220 PF00119 ATP synthase A chain JH395_RS05225 PF00137 ATP synthase subunit C JH395_RS05230 PF00430 ATP synthase B/B' CF(0) JH395_RS05235 PF00213 ATP synthase delta (OSCP) subunit JH395_RS05240 PF02874 ATP synthase alpha/beta family, beta-barrel domain JH395_RS05240 PF00306 ATP synthase alpha/beta chain, C terminal domain JH395_RS05240 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JH395_RS05245 PF00231 ATP synthase JH395_RS05250 PF02874 ATP synthase alpha/beta family, beta-barrel domain JH395_RS05250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JH395_RS05255 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JH395_RS05255 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JH395_RS05260 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JH395_RS05275 PF01809 Putative membrane protein insertion efficiency factor JH395_RS05285 PF01098 Cell cycle protein JH395_RS05290 PF01597 Glycine cleavage H-protein JH395_RS05295 PF00005 ABC transporter JH395_RS05295 PF09383 NIL domain JH395_RS05300 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS05305 PF03180 NLPA lipoprotein JH395_RS05310 PF00056 lactate/malate dehydrogenase, NAD binding domain JH395_RS05310 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JH395_RS05320 PF08240 Alcohol dehydrogenase GroES-like domain JH395_RS05320 PF00107 Zinc-binding dehydrogenase JH395_RS05325 PF01820 D-ala D-ala ligase N-terminus JH395_RS05325 PF07478 D-ala D-ala ligase C-terminus JH395_RS05345 PF00582 Universal stress protein family JH395_RS05355 PF05496 Holliday junction DNA helicase RuvB P-loop domain JH395_RS05355 PF12002 MgsA AAA+ ATPase C terminal JH395_RS05355 PF16193 AAA C-terminal domain JH395_RS05360 PF18419 ATP-grasp-like domain JH395_RS05360 PF04262 Glutamate-cysteine ligase JH395_RS05365 PF01022 Bacterial regulatory protein, arsR family JH395_RS05380 PF06335 Protein of unknown function (DUF1054) JH395_RS05385 PF01479 S4 domain JH395_RS05385 PF00163 Ribosomal protein S4/S9 N-terminal domain JH395_RS05390 PF13185 GAF domain JH395_RS05395 PF06160 Septation ring formation regulator, EzrA JH395_RS05400 PF00266 Aminotransferase class-V JH395_RS05405 PF02568 Thiamine biosynthesis protein (ThiI) JH395_RS05405 PF02926 THUMP domain JH395_RS05410 PF04262 Glutamate-cysteine ligase JH395_RS05410 PF18419 ATP-grasp-like domain JH395_RS05410 PF02655 ATP-grasp domain JH395_RS05415 PF08534 Redoxin JH395_RS05420 PF08264 Anticodon-binding domain of tRNA JH395_RS05420 PF00133 tRNA synthetases class I (I, L, M and V) JH395_RS05420 PF10458 Valyl tRNA synthetase tRNA binding arm JH395_RS05425 PF02875 Mur ligase family, glutamate ligase domain JH395_RS05425 PF08245 Mur ligase middle domain JH395_RS05430 PF04002 RadC-like JAB domain JH395_RS05440 PF04085 rod shape-determining protein MreC JH395_RS05450 PF03775 Septum formation inhibitor MinC, C-terminal domain JH395_RS05455 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JH395_RS05460 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS05465 PF00005 ABC transporter JH395_RS05470 PF00497 Bacterial extracellular solute-binding proteins, family 3 JH395_RS05475 PF13840 ACT domain JH395_RS05475 PF00696 Amino acid kinase family JH395_RS05480 PF05193 Peptidase M16 inactive domain JH395_RS05485 PF05193 Peptidase M16 inactive domain JH395_RS05485 PF00675 Insulinase (Peptidase family M16) JH395_RS05490 PF13464 Domain of unknown function (DUF4115) JH395_RS05495 PF01066 CDP-alcohol phosphatidyltransferase JH395_RS05500 PF02464 Competence-damaged protein JH395_RS05500 PF18146 Damage-inducible protein CinA KH domain JH395_RS05500 PF00994 Probable molybdopterin binding domain JH395_RS05505 PF00154 recA bacterial DNA recombination protein JH395_RS05510 PF00013 KH domain JH395_RS05510 PF01966 HD domain JH395_RS05510 PF12072 Domain of unknown function (DUF3552) JH395_RS05515 PF13277 YmdB-like protein JH395_RS05520 PF00488 MutS domain V JH395_RS05520 PF05190 MutS family domain IV JH395_RS05520 PF05192 MutS domain III JH395_RS05520 PF05188 MutS domain II JH395_RS05520 PF01624 MutS domain I JH395_RS05525 PF01119 DNA mismatch repair protein, C-terminal domain JH395_RS05525 PF08676 MutL C terminal dimerisation domain JH395_RS05545 PF01330 RuvA N terminal domain JH395_RS05545 PF07499 RuvA, C-terminal domain JH395_RS05550 PF05491 RuvB C-terminal winged helix domain JH395_RS05550 PF05496 Holliday junction DNA helicase RuvB P-loop domain JH395_RS05550 PF17864 RuvB AAA lid domain JH395_RS05555 PF02547 Queuosine biosynthesis protein JH395_RS05560 PF01702 Queuine tRNA-ribosyltransferase JH395_RS05565 PF02699 Preprotein translocase subunit JH395_RS05570 PF11799 impB/mucB/samB family C-terminal domain JH395_RS05570 PF00817 impB/mucB/samB family JH395_RS05575 PF02272 DHHA1 domain JH395_RS05575 PF01368 DHH family JH395_RS05580 PF00270 DEAD/DEAH box helicase JH395_RS05580 PF00271 Helicase conserved C-terminal domain JH395_RS05585 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JH395_RS05585 PF01411 tRNA synthetases class II (A) JH395_RS05585 PF02272 DHHA1 domain JH395_RS05590 PF06135 IreB regulatory phosphoprotein JH395_RS05595 PF03652 Holliday junction resolvase JH395_RS05600 PF06949 Protein of unknown function (DUF1292) JH395_RS05610 PF00488 MutS domain V JH395_RS05610 PF01713 Smr domain JH395_RS05615 PF00085 Thioredoxin JH395_RS05620 PF10702 Protein of unknown function (DUF2507) JH395_RS05625 PF01177 Asp/Glu/Hydantoin racemase JH395_RS05630 PF01725 Ham1 family JH395_RS05645 PF00132 Bacterial transferase hexapeptide (six repeats) JH395_RS05645 PF14602 Hexapeptide repeat of succinyl-transferase JH395_RS05645 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JH395_RS05650 PF01546 Peptidase family M20/M25/M40 JH395_RS05650 PF07687 Peptidase dimerisation domain JH395_RS05655 PF00924 Mechanosensitive ion channel JH395_RS05670 PF13411 MerR HTH family regulatory protein JH395_RS05675 PF01321 Creatinase/Prolidase N-terminal domain JH395_RS05675 PF00557 Metallopeptidase family M24 JH395_RS05680 PF00356 Bacterial regulatory proteins, lacI family JH395_RS05695 PF01709 Transcriptional regulator JH395_RS05700 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JH395_RS05700 PF00294 pfkB family carbohydrate kinase JH395_RS05705 PF00437 Type II/IV secretion system protein JH395_RS05735 PF02384 N-6 DNA Methylase JH395_RS05740 PF00871 Acetokinase family JH395_RS05745 PF00324 Amino acid permease JH395_RS05755 PF02872 5'-nucleotidase, C-terminal domain JH395_RS05760 PF06265 Protein of unknown function (DUF1027) JH395_RS05765 PF13344 Haloacid dehalogenase-like hydrolase JH395_RS05775 PF09335 SNARE associated Golgi protein JH395_RS05780 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JH395_RS05785 PF00575 S1 RNA binding domain JH395_RS05925 PF12706 Beta-lactamase superfamily domain JH395_RS05930 PF03960 ArsC family JH395_RS05935 PF05389 Negative regulator of genetic competence (MecA) JH395_RS05945 PF08439 Oligopeptidase F JH395_RS05945 PF01432 Peptidase family M3 JH395_RS05955 PF04607 Region found in RelA / SpoT proteins JH395_RS05960 PF01513 ATP-NAD kinase JH395_RS05965 PF00849 RNA pseudouridylate synthase JH395_RS05970 PF03932 CutC family JH395_RS05975 PF10282 Lactonase, 7-bladed beta-propeller JH395_RS05985 PF01594 AI-2E family transporter JH395_RS05990 PF00253 Ribosomal protein S14p/S29e JH395_RS06000 PF05525 Branched-chain amino acid transport protein JH395_RS06010 PF00588 SpoU rRNA Methylase family JH395_RS06015 PF01580 FtsK/SpoIIIE family JH395_RS06015 PF17854 FtsK alpha domain JH395_RS06015 PF09397 Ftsk gamma domain JH395_RS06035 PF02381 MraZ protein, putative antitoxin-like JH395_RS06040 PF01795 MraW methylase family JH395_RS06050 PF03793 PASTA domain JH395_RS06050 PF00905 Penicillin binding protein transpeptidase domain JH395_RS06050 PF03717 Penicillin-binding Protein dimerisation domain JH395_RS06055 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JH395_RS06055 PF00953 Glycosyl transferase family 4 JH395_RS06060 PF08245 Mur ligase middle domain JH395_RS06060 PF02875 Mur ligase family, glutamate ligase domain JH395_RS06065 PF03033 Glycosyltransferase family 28 N-terminal domain JH395_RS06065 PF04101 Glycosyltransferase family 28 C-terminal domain JH395_RS06070 PF08478 POTRA domain, FtsQ-type JH395_RS06070 PF03799 Cell division protein FtsQ JH395_RS06075 PF02491 SHS2 domain inserted in FTSA JH395_RS06075 PF11983 Membrane-attachment and polymerisation-promoting switch JH395_RS06080 PF00091 Tubulin/FtsZ family, GTPase domain JH395_RS06080 PF12327 FtsZ family, C-terminal domain JH395_RS06085 PF04472 Cell division protein SepF JH395_RS06090 PF02325 YGGT family JH395_RS06100 PF05103 DivIVA protein JH395_RS06105 PF08264 Anticodon-binding domain of tRNA JH395_RS06105 PF00133 tRNA synthetases class I (I, L, M and V) JH395_RS06105 PF06827 Zinc finger found in FPG and IleRS JH395_RS06110 PF00005 ABC transporter JH395_RS06120 PF04397 LytTr DNA-binding domain JH395_RS06120 PF00072 Response regulator receiver domain JH395_RS06130 PF01678 Diaminopimelate epimerase JH395_RS06135 PF00293 NUDIX domain JH395_RS06145 PF01048 Phosphorylase superfamily JH395_RS06150 PF00266 Aminotransferase class-V JH395_RS06165 PF02386 Cation transport protein JH395_RS06170 PF02080 TrkA-C domain JH395_RS06170 PF02254 TrkA-N domain JH395_RS06190 PF00300 Histidine phosphatase superfamily (branch 1) JH395_RS06200 PF14490 Helix-hairpin-helix containing domain JH395_RS06200 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JH395_RS06200 PF13538 UvrD-like helicase C-terminal domain JH395_RS06205 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JH395_RS06205 PF14572 Phosphoribosyl synthetase-associated domain JH395_RS06210 PF01476 LysM domain JH395_RS06210 PF06725 3D domain JH395_RS06220 PF00781 Diacylglycerol kinase catalytic domain JH395_RS06225 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JH395_RS06225 PF00753 Metallo-beta-lactamase superfamily JH395_RS06225 PF17770 Ribonuclease J C-terminal domain JH395_RS06230 PF07288 Protein of unknown function (DUF1447) JH395_RS06240 PF01327 Polypeptide deformylase JH395_RS06245 PF00676 Dehydrogenase E1 component JH395_RS06250 PF02780 Transketolase, C-terminal domain JH395_RS06250 PF02779 Transketolase, pyrimidine binding domain JH395_RS06255 PF02817 e3 binding domain JH395_RS06255 PF00364 Biotin-requiring enzyme JH395_RS06255 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JH395_RS06260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JH395_RS06260 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH395_RS06265 PF00056 lactate/malate dehydrogenase, NAD binding domain JH395_RS06265 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JH395_RS06270 PF05256 Uncharacterised protein family (UPF0223) JH395_RS06275 PF00459 Inositol monophosphatase family JH395_RS06280 PF00679 Elongation factor G C-terminus JH395_RS06280 PF14492 Elongation Factor G, domain II JH395_RS06280 PF00009 Elongation factor Tu GTP binding domain JH395_RS06280 PF03144 Elongation factor Tu domain 2 JH395_RS06300 PF01098 Cell cycle protein JH395_RS06305 PF02436 Conserved carboxylase domain JH395_RS06305 PF00682 HMGL-like JH395_RS06305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JH395_RS06305 PF00364 Biotin-requiring enzyme JH395_RS06305 PF00289 Biotin carboxylase, N-terminal domain JH395_RS06305 PF02785 Biotin carboxylase C-terminal domain JH395_RS06310 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) JH395_RS06320 PF01467 Cytidylyltransferase-like JH395_RS06325 PF05362 Lon protease (S16) C-terminal proteolytic domain JH395_RS06325 PF13180 PDZ domain JH395_RS06330 PF10531 SLBB domain JH395_RS06335 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JH395_RS06340 PF03772 Competence protein JH395_RS06340 PF13567 Domain of unknown function (DUF4131) JH395_RS06340 PF00753 Metallo-beta-lactamase superfamily JH395_RS06345 PF06144 DNA polymerase III, delta subunit JH395_RS06350 PF01649 Ribosomal protein S20 JH395_RS06355 PF00312 Ribosomal protein S15 JH395_RS06360 PF00665 Integrase core domain JH395_RS06360 PF13936 Helix-turn-helix domain JH395_RS06365 PF07690 Major Facilitator Superfamily JH395_RS06370 PF00701 Dihydrodipicolinate synthetase family JH395_RS06375 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JH395_RS06375 PF17770 Ribonuclease J C-terminal domain JH395_RS06375 PF00753 Metallo-beta-lactamase superfamily JH395_RS06385 PF03143 Elongation factor Tu C-terminal domain JH395_RS06385 PF03144 Elongation factor Tu domain 2 JH395_RS06385 PF00009 Elongation factor Tu GTP binding domain JH395_RS06390 PF05698 Bacterial trigger factor protein (TF) C-terminus JH395_RS06390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JH395_RS06390 PF05697 Bacterial trigger factor protein (TF) JH395_RS06395 PF10431 C-terminal, D2-small domain, of ClpB protein JH395_RS06395 PF06689 ClpX C4-type zinc finger JH395_RS06395 PF07724 AAA domain (Cdc48 subfamily) JH395_RS06400 PF01926 50S ribosome-binding GTPase JH395_RS06420 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS06425 PF00005 ABC transporter JH395_RS06430 PF01541 GIY-YIG catalytic domain JH395_RS06430 PF02151 UvrB/uvrC motif JH395_RS06430 PF08459 UvrC Helix-hairpin-helix N-terminal JH395_RS06440 PF13614 AAA domain JH395_RS06450 PF01370 NAD dependent epimerase/dehydratase family JH395_RS06455 PF02397 Bacterial sugar transferase JH395_RS06460 PF00534 Glycosyl transferases group 1 JH395_RS06460 PF13439 Glycosyltransferase Family 4 JH395_RS06485 PF00149 Calcineurin-like phosphoesterase JH395_RS06490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JH395_RS06490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JH395_RS06495 PF00294 pfkB family carbohydrate kinase JH395_RS06500 PF08220 DeoR-like helix-turn-helix domain JH395_RS06500 PF00455 DeoR C terminal sensor domain JH395_RS06505 PF09269 Domain of unknown function (DUF1967) JH395_RS06505 PF01018 GTP1/OBG JH395_RS06505 PF01926 50S ribosome-binding GTPase JH395_RS06515 PF00753 Metallo-beta-lactamase superfamily JH395_RS06515 PF12706 Beta-lactamase superfamily domain JH395_RS06520 PF00106 short chain dehydrogenase JH395_RS06525 PF06305 Lipopolysaccharide assembly protein A domain JH395_RS06530 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JH395_RS06530 PF17768 RecJ OB domain JH395_RS06530 PF02272 DHHA1 domain JH395_RS06530 PF01368 DHH family JH395_RS06535 PF00156 Phosphoribosyl transferase domain JH395_RS06550 PF01906 Putative heavy-metal-binding JH395_RS06615 PF00535 Glycosyl transferase family 2 JH395_RS06630 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal JH395_RS06630 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal JH395_RS06645 PF01726 LexA DNA binding domain JH395_RS06645 PF00717 Peptidase S24-like JH395_RS06650 PF05979 Bacterial protein of unknown function (DUF896) JH395_RS06655 PF03672 Uncharacterised protein family (UPF0154) JH395_RS06660 PF01553 Acyltransferase JH395_RS06665 PF05175 Methyltransferase small domain JH395_RS06670 PF01541 GIY-YIG catalytic domain JH395_RS06675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JH395_RS06675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JH395_RS06685 PF00318 Ribosomal protein S2 JH395_RS06690 PF00889 Elongation factor TS JH395_RS06695 PF00696 Amino acid kinase family JH395_RS06700 PF01765 Ribosome recycling factor JH395_RS06705 PF01255 Putative undecaprenyl diphosphate synthase JH395_RS06715 PF02163 Peptidase family M50 JH395_RS06715 PF17820 PDZ domain JH395_RS06720 PF03129 Anticodon binding domain JH395_RS06720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JH395_RS06720 PF04073 Aminoacyl-tRNA editing domain JH395_RS06725 PF14480 DNA polymerase III polC-type N-terminus I JH395_RS06725 PF07733 Bacterial DNA polymerase III alpha NTPase domain JH395_RS06725 PF00929 Exonuclease JH395_RS06725 PF02811 PHP domain JH395_RS06725 PF11490 DNA polymerase III polC-type N-terminus II JH395_RS06725 PF14579 Helix-hairpin-helix motif JH395_RS06725 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JH395_RS06730 PF17384 RimP C-terminal SH3 domain JH395_RS06730 PF02576 RimP N-terminal domain JH395_RS06735 PF00575 S1 RNA binding domain JH395_RS06735 PF08529 NusA N-terminal domain JH395_RS06735 PF13184 NusA-like KH domain JH395_RS06740 PF04296 Protein of unknown function (DUF448) JH395_RS06745 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JH395_RS06750 PF11987 Translation-initiation factor 2 JH395_RS06750 PF04760 Translation initiation factor IF-2, N-terminal region JH395_RS06750 PF00009 Elongation factor Tu GTP binding domain JH395_RS06755 PF02033 Ribosome-binding factor A JH395_RS06760 PF07690 Major Facilitator Superfamily JH395_RS06765 PF01264 Chorismate synthase JH395_RS06775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JH395_RS06780 PF02153 Prephenate dehydrogenase JH395_RS06780 PF01842 ACT domain JH395_RS06785 PF01202 Shikimate kinase JH395_RS06790 PF16198 tRNA pseudouridylate synthase B C-terminal domain JH395_RS06790 PF01509 TruB family pseudouridylate synthase (N terminal domain) JH395_RS06795 PF06574 FAD synthetase JH395_RS06795 PF01687 Riboflavin kinase JH395_RS06800 PF03306 Alpha-acetolactate decarboxylase JH395_RS06805 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding JH395_RS06805 PF01628 HrcA protein C terminal domain JH395_RS06810 PF01025 GrpE JH395_RS06815 PF00012 Hsp70 protein JH395_RS06820 PF00684 DnaJ central domain JH395_RS06820 PF01556 DnaJ C terminal domain JH395_RS06820 PF00226 DnaJ domain JH395_RS06825 PF11954 Domain of unknown function (DUF3471) JH395_RS06825 PF00144 Beta-lactamase JH395_RS06835 PF13193 AMP-binding enzyme C-terminal domain JH395_RS06835 PF00501 AMP-binding enzyme JH395_RS06840 PF03062 MBOAT, membrane-bound O-acyltransferase family JH395_RS06845 PF00550 Phosphopantetheine attachment site JH395_RS06850 PF04914 DltD protein JH395_RS06855 PF06421 GTP-binding protein LepA C-terminus JH395_RS06855 PF03144 Elongation factor Tu domain 2 JH395_RS06855 PF00679 Elongation factor G C-terminus JH395_RS06855 PF00009 Elongation factor Tu GTP binding domain JH395_RS06860 PF14659 Phage integrase, N-terminal SAM-like domain JH395_RS06860 PF00589 Phage integrase family JH395_RS06885 PF02245 Methylpurine-DNA glycosylase (MPG) JH395_RS06895 PF04452 RNA methyltransferase JH395_RS06905 PF13291 ACT domain JH395_RS06905 PF04607 Region found in RelA / SpoT proteins JH395_RS06905 PF02824 TGS domain JH395_RS06910 PF02580 D-Tyr-tRNA(Tyr) deacylase JH395_RS06915 PF13419 Haloacid dehalogenase-like hydrolase JH395_RS06920 PF03881 Fructosamine kinase JH395_RS06925 PF08239 Bacterial SH3 domain JH395_RS06925 PF01520 N-acetylmuramoyl-L-alanine amidase JH395_RS06930 PF13393 Histidyl-tRNA synthetase JH395_RS06930 PF03129 Anticodon binding domain JH395_RS06935 PF02938 GAD domain JH395_RS06935 PF00152 tRNA synthetases class II (D, K and N) JH395_RS06935 PF01336 OB-fold nucleic acid binding domain JH395_RS06940 PF01625 Peptide methionine sulfoxide reductase JH395_RS06945 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JH395_RS06945 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JH395_RS06950 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JH395_RS06955 PF01261 Xylose isomerase-like TIM barrel JH395_RS06965 PF03618 Kinase/pyrophosphorylase JH395_RS06970 PF01165 Ribosomal protein S21 JH395_RS06975 PF09424 Yqey-like protein JH395_RS06980 PF02562 PhoH-like protein JH395_RS06985 PF02130 Uncharacterized protein family UPF0054 JH395_RS06990 PF01219 Prokaryotic diacylglycerol kinase JH395_RS06995 PF07650 KH domain JH395_RS06995 PF01926 50S ribosome-binding GTPase JH395_RS07000 PF02565 Recombination protein O C terminal JH395_RS07000 PF11967 Recombination protein O N terminal JH395_RS07005 PF02091 Glycyl-tRNA synthetase alpha subunit JH395_RS07010 PF02092 Glycyl-tRNA synthetase beta subunit JH395_RS07015 PF10410 DnaB-helicase binding domain of primase JH395_RS07015 PF08275 DNA primase catalytic core, N-terminal domain JH395_RS07015 PF01807 CHC2 zinc finger JH395_RS07020 PF04539 Sigma-70 region 3 JH395_RS07020 PF04542 Sigma-70 region 2 JH395_RS07020 PF04545 Sigma-70, region 4 JH395_RS07020 PF00140 Sigma-70 factor, region 1.2 JH395_RS07020 PF03979 Sigma-70 factor, region 1.1 JH395_RS07025 PF00392 Bacterial regulatory proteins, gntR family JH395_RS07030 PF00005 ABC transporter JH395_RS07050 PF00005 ABC transporter JH395_RS07065 PF13302 Acetyltransferase (GNAT) domain JH395_RS07065 PF03352 Methyladenine glycosylase JH395_RS07065 PF00958 GMP synthase C terminal domain JH395_RS07065 PF13673 Acetyltransferase (GNAT) domain JH395_RS07065 PF00117 Glutamine amidotransferase class-I JH395_RS07075 PF00005 ABC transporter JH395_RS07085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH395_RS07085 PF07730 Histidine kinase JH395_RS07090 PF00196 Bacterial regulatory proteins, luxR family JH395_RS07090 PF00072 Response regulator receiver domain JH395_RS07095 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH395_RS07095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JH395_RS07105 PF08240 Alcohol dehydrogenase GroES-like domain JH395_RS07105 PF00107 Zinc-binding dehydrogenase JH395_RS07110 PF03466 LysR substrate binding domain JH395_RS07110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH395_RS07130 PF01418 Helix-turn-helix domain, rpiR family JH395_RS07130 PF01380 SIS domain JH395_RS07135 PF12464 Maltose acetyltransferase JH395_RS07135 PF14602 Hexapeptide repeat of succinyl-transferase JH395_RS07135 PF00132 Bacterial transferase hexapeptide (six repeats) JH395_RS07140 PF13419 Haloacid dehalogenase-like hydrolase JH395_RS07160 PF03960 ArsC family JH395_RS07170 PF00455 DeoR C terminal sensor domain JH395_RS07170 PF08220 DeoR-like helix-turn-helix domain JH395_RS07175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JH395_RS07175 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH395_RS07180 PF01546 Peptidase family M20/M25/M40 JH395_RS07180 PF07687 Peptidase dimerisation domain JH395_RS07190 PF07690 Major Facilitator Superfamily JH395_RS07195 PF03952 Enolase, N-terminal domain JH395_RS07195 PF00113 Enolase, C-terminal TIM barrel domain JH395_RS07200 PF00403 Heavy-metal-associated domain JH395_RS07220 PF01047 MarR family JH395_RS07230 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JH395_RS07230 PF02896 PEP-utilising enzyme, TIM barrel domain JH395_RS07230 PF00391 PEP-utilising enzyme, mobile domain JH395_RS07240 PF00005 ABC transporter JH395_RS07240 PF13732 Domain of unknown function (DUF4162) JH395_RS07245 PF01061 ABC-2 type transporter JH395_RS07255 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JH395_RS07260 PF01784 NIF3 (NGG1p interacting factor 3) JH395_RS07265 PF01546 Peptidase family M20/M25/M40 JH395_RS07265 PF07687 Peptidase dimerisation domain JH395_RS07270 PF02861 Clp amino terminal domain, pathogenicity island component JH395_RS07270 PF10431 C-terminal, D2-small domain, of ClpB protein JH395_RS07270 PF00004 ATPase family associated with various cellular activities (AAA) JH395_RS07270 PF17871 AAA lid domain JH395_RS07270 PF07724 AAA domain (Cdc48 subfamily) JH395_RS07280 PF01336 OB-fold nucleic acid binding domain JH395_RS07280 PF07733 Bacterial DNA polymerase III alpha NTPase domain JH395_RS07280 PF02811 PHP domain JH395_RS07280 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JH395_RS07280 PF14579 Helix-hairpin-helix motif JH395_RS07285 PF00365 Phosphofructokinase JH395_RS07290 PF00391 PEP-utilising enzyme, mobile domain JH395_RS07290 PF02887 Pyruvate kinase, alpha/beta domain JH395_RS07290 PF00224 Pyruvate kinase, barrel domain JH395_RS07295 PF04284 Protein of unknown function (DUF441) JH395_RS07300 PF17783 CvfB-like winged helix domain JH395_RS07300 PF13509 S1 domain JH395_RS07305 PF02899 Phage integrase, N-terminal SAM-like domain JH395_RS07305 PF00589 Phage integrase family JH395_RS07310 PF00583 Acetyltransferase (GNAT) family JH395_RS07315 PF02616 Segregation and condensation protein ScpA JH395_RS07320 PF04079 Segregation and condensation complex subunit ScpB JH395_RS07325 PF01479 S4 domain JH395_RS07325 PF00849 RNA pseudouridylate synthase JH395_RS07330 PF12822 ECF transporter, substrate-specific component JH395_RS07340 PF00270 DEAD/DEAH box helicase JH395_RS07340 PF00271 Helicase conserved C-terminal domain JH395_RS07350 PF02224 Cytidylate kinase JH395_RS07355 PF00575 S1 RNA binding domain JH395_RS07360 PF01926 50S ribosome-binding GTPase JH395_RS07360 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JH395_RS07365 PF00216 Bacterial DNA-binding protein JH395_RS07380 PF01113 Dihydrodipicolinate reductase, N-terminus JH395_RS07380 PF05173 Dihydrodipicolinate reductase, C-terminus JH395_RS07385 PF13735 tRNA nucleotidyltransferase domain 2 putative JH395_RS07385 PF12627 Probable RNA and SrmB- binding site of polymerase A JH395_RS07385 PF01743 Poly A polymerase head domain JH395_RS07395 PF16326 ABC transporter C-terminal domain JH395_RS07395 PF12848 ABC transporter JH395_RS07395 PF00005 ABC transporter JH395_RS07400 PF00303 Thymidylate synthase JH395_RS07405 PF00186 Dihydrofolate reductase JH395_RS07410 PF02645 Uncharacterised protein, DegV family COG1307 JH395_RS07415 PF13472 GDSL-like Lipase/Acylhydrolase family JH395_RS07420 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) JH395_RS07425 PF06855 YozE SAM-like fold JH395_RS07430 PF01471 Putative peptidoglycan binding domain JH395_RS07430 PF03572 Peptidase family S41 JH395_RS07430 PF17820 PDZ domain JH395_RS07435 PF07690 Major Facilitator Superfamily JH395_RS07450 PF03466 LysR substrate binding domain JH395_RS07450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH395_RS07455 PF01717 Cobalamin-independent synthase, Catalytic domain JH395_RS07460 PF01926 50S ribosome-binding GTPase JH395_RS07465 PF01351 Ribonuclease HII JH395_RS07470 PF18255 DNA processing protein A sterile alpha motif domain JH395_RS07470 PF02481 DNA recombination-mediator protein A JH395_RS07475 PF01751 Toprim domain JH395_RS07475 PF01396 Topoisomerase DNA binding C4 zinc finger JH395_RS07475 PF01131 DNA topoisomerase JH395_RS07480 PF01134 Glucose inhibited division protein A JH395_RS07485 PF00589 Phage integrase family JH395_RS07485 PF02899 Phage integrase, N-terminal SAM-like domain JH395_RS07490 PF00227 Proteasome subunit JH395_RS07495 PF00004 ATPase family associated with various cellular activities (AAA) JH395_RS07495 PF07724 AAA domain (Cdc48 subfamily) JH395_RS07495 PF10431 C-terminal, D2-small domain, of ClpB protein JH395_RS07500 PF01263 Aldose 1-epimerase JH395_RS07505 PF02660 Glycerol-3-phosphate acyltransferase JH395_RS07510 PF00204 DNA gyrase B JH395_RS07510 PF00986 DNA gyrase B subunit, carboxyl terminus JH395_RS07510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH395_RS07510 PF01751 Toprim domain JH395_RS07515 PF00521 DNA gyrase/topoisomerase IV, subunit A JH395_RS07515 PF03989 DNA gyrase C-terminal domain, beta-propeller JH395_RS07520 PF03466 LysR substrate binding domain JH395_RS07520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH395_RS07525 PF01368 DHH family JH395_RS07525 PF02833 DHHA2 domain JH395_RS07530 PF01641 SelR domain JH395_RS07535 PF01625 Peptide methionine sulfoxide reductase JH395_RS07565 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH395_RS07565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JH395_RS07570 PF01047 MarR family JH395_RS07575 PF13673 Acetyltransferase (GNAT) domain JH395_RS07580 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JH395_RS07585 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JH395_RS07590 PF08240 Alcohol dehydrogenase GroES-like domain JH395_RS07590 PF16912 Glucose dehydrogenase C-terminus JH395_RS07595 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JH395_RS07605 PF02652 L-lactate permease JH395_RS07620 PF00324 Amino acid permease JH395_RS07675 PF02645 Uncharacterised protein, DegV family COG1307 JH395_RS07685 PF05670 NFACT protein RNA binding domain JH395_RS07690 PF12679 ABC-2 family transporter protein JH395_RS07695 PF00005 ABC transporter JH395_RS07720 PF08818 Domain of unknown function (DU1801) JH395_RS07725 PF00300 Histidine phosphatase superfamily (branch 1) JH395_RS07735 PF02142 MGS-like domain JH395_RS07735 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JH395_RS07735 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JH395_RS07740 PF00117 Glutamine amidotransferase class-I JH395_RS07740 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JH395_RS07745 PF00156 Phosphoribosyl transferase domain JH395_RS07750 PF01479 S4 domain JH395_RS07750 PF00849 RNA pseudouridylate synthase JH395_RS07755 PF01252 Signal peptidase (SPase) II JH395_RS07760 PF01268 Formate--tetrahydrofolate ligase JH395_RS07775 PF01266 FAD dependent oxidoreductase JH395_RS07790 PF00005 ABC transporter JH395_RS07800 PF17676 LD-carboxypeptidase C-terminal domain JH395_RS07800 PF02016 LD-carboxypeptidase N-terminal domain JH395_RS07820 PF00535 Glycosyl transferase family 2 JH395_RS07830 PF00326 Prolyl oligopeptidase family JH395_RS07835 PF07690 Major Facilitator Superfamily JH395_RS07845 PF02926 THUMP domain JH395_RS07845 PF01170 Putative RNA methylase family UPF0020 JH395_RS07855 PF05103 DivIVA protein JH395_RS07860 PF06908 YspA SLOG family JH395_RS07865 PF03838 Recombination protein U JH395_RS07870 PF00912 Transglycosylase JH395_RS07870 PF00905 Penicillin binding protein transpeptidase domain JH395_RS07875 PF08402 TOBE domain JH395_RS07875 PF00005 ABC transporter JH395_RS07880 PF01547 Bacterial extracellular solute-binding protein JH395_RS07885 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS07895 PF03180 NLPA lipoprotein JH395_RS07900 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS07905 PF00005 ABC transporter JH395_RS07905 PF09383 NIL domain JH395_RS07915 PF01336 OB-fold nucleic acid binding domain JH395_RS07915 PF00152 tRNA synthetases class II (D, K and N) JH395_RS07920 PF00155 Aminotransferase class I and II JH395_RS07930 PF00929 Exonuclease JH395_RS07930 PF04851 Type III restriction enzyme, res subunit JH395_RS07930 PF13307 Helicase C-terminal domain JH395_RS07935 PF00288 GHMP kinases N terminal domain JH395_RS07945 PF00288 GHMP kinases N terminal domain JH395_RS07945 PF08544 GHMP kinases C terminal JH395_RS07950 PF01070 FMN-dependent dehydrogenase JH395_RS07955 PF01263 Aldose 1-epimerase JH395_RS07960 PF03633 Glycosyl hydrolase family 65, C-terminal domain JH395_RS07960 PF03636 Glycosyl hydrolase family 65, N-terminal domain JH395_RS07960 PF03632 Glycosyl hydrolase family 65 central catalytic domain JH395_RS07975 PF17126 RsmF rRNA methyltransferase first C-terminal domain JH395_RS07975 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JH395_RS07975 PF01189 16S rRNA methyltransferase RsmB/F JH395_RS07985 PF13520 Amino acid permease JH395_RS07990 PF00202 Aminotransferase class-III JH395_RS08015 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JH395_RS08015 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JH395_RS08020 PF01361 Tautomerase enzyme JH395_RS08025 PF03577 Peptidase family C69 JH395_RS08035 PF05532 CsbD-like JH395_RS08040 PF04226 Transglycosylase associated protein JH395_RS08050 PF00781 Diacylglycerol kinase catalytic domain JH395_RS08055 PF05656 Protein of unknown function (DUF805) JH395_RS08065 PF03073 TspO/MBR family JH395_RS08080 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JH395_RS08135 PF07690 Major Facilitator Superfamily JH395_RS08145 PF03193 RsgA GTPase JH395_RS08150 PF03061 Thioesterase superfamily JH395_RS08155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH395_RS08155 PF03466 LysR substrate binding domain JH395_RS08160 PF04474 Protein of unknown function (DUF554) JH395_RS08175 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JH395_RS08180 PF01039 Carboxyl transferase domain JH395_RS08185 PF00289 Biotin carboxylase, N-terminal domain JH395_RS08185 PF02785 Biotin carboxylase C-terminal domain JH395_RS08185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JH395_RS08190 PF07977 FabA-like domain JH395_RS08195 PF00364 Biotin-requiring enzyme JH395_RS08200 PF00109 Beta-ketoacyl synthase, N-terminal domain JH395_RS08200 PF02801 Beta-ketoacyl synthase, C-terminal domain JH395_RS08210 PF00698 Acyl transferase domain JH395_RS08215 PF00550 Phosphopantetheine attachment site JH395_RS08220 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JH395_RS08220 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JH395_RS08225 PF07977 FabA-like domain JH395_RS08235 PF00106 short chain dehydrogenase JH395_RS08245 PF00107 Zinc-binding dehydrogenase JH395_RS08245 PF08240 Alcohol dehydrogenase GroES-like domain JH395_RS08260 PF00290 Tryptophan synthase alpha chain JH395_RS08265 PF00291 Pyridoxal-phosphate dependent enzyme JH395_RS08270 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JH395_RS08275 PF00218 Indole-3-glycerol phosphate synthase JH395_RS08280 PF02885 Glycosyl transferase family, helical bundle domain JH395_RS08280 PF00591 Glycosyl transferase family, a/b domain JH395_RS08285 PF00591 Glycosyl transferase family, a/b domain JH395_RS08285 PF02885 Glycosyl transferase family, helical bundle domain JH395_RS08285 PF00117 Glutamine amidotransferase class-I JH395_RS08290 PF04715 Anthranilate synthase component I, N terminal region JH395_RS08290 PF00425 chorismate binding enzyme JH395_RS08300 PF00005 ABC transporter JH395_RS08320 PF01245 Ribosomal protein L19 JH395_RS08325 PF01746 tRNA (Guanine-1)-methyltransferase JH395_RS08330 PF05239 PRC-barrel domain JH395_RS08330 PF01782 RimM N-terminal domain JH395_RS08340 PF00886 Ribosomal protein S16 JH395_RS08345 PF00448 SRP54-type protein, GTPase domain JH395_RS08345 PF02881 SRP54-type protein, helical bundle domain JH395_RS08345 PF02978 Signal peptide binding domain JH395_RS08350 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JH395_RS08355 PF00448 SRP54-type protein, GTPase domain JH395_RS08355 PF02881 SRP54-type protein, helical bundle domain JH395_RS08360 PF02463 RecF/RecN/SMC N terminal domain JH395_RS08360 PF06470 SMC proteins Flexible Hinge Domain JH395_RS08365 PF14622 Ribonuclease-III-like JH395_RS08365 PF00035 Double-stranded RNA binding motif JH395_RS08370 PF00550 Phosphopantetheine attachment site JH395_RS08375 PF02504 Fatty acid synthesis protein JH395_RS08380 PF17191 RecG wedge domain JH395_RS08380 PF00271 Helicase conserved C-terminal domain JH395_RS08380 PF00270 DEAD/DEAH box helicase JH395_RS08385 PF13684 Dihydroxyacetone kinase family JH395_RS08385 PF02734 DAK2 domain JH395_RS08390 PF03780 Asp23 family, cell envelope-related function JH395_RS08395 PF00830 Ribosomal L28 family JH395_RS08405 PF04263 Thiamin pyrophosphokinase, catalytic domain JH395_RS08405 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain JH395_RS08410 PF00834 Ribulose-phosphate 3 epimerase family JH395_RS08415 PF16745 RsgA N-terminal domain JH395_RS08415 PF03193 RsgA GTPase JH395_RS08420 PF03793 PASTA domain JH395_RS08420 PF00069 Protein kinase domain JH395_RS08430 PF01189 16S rRNA methyltransferase RsmB/F JH395_RS08430 PF01029 NusB family JH395_RS08435 PF00551 Formyl transferase JH395_RS08435 PF02911 Formyl transferase, C-terminal domain JH395_RS08440 PF18074 Primosomal protein N C-terminal domain JH395_RS08440 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JH395_RS08440 PF00271 Helicase conserved C-terminal domain JH395_RS08440 PF04851 Type III restriction enzyme, res subunit JH395_RS08440 PF17764 3′ DNA-binding domain (3′BD) JH395_RS08445 PF04127 DNA / pantothenate metabolism flavoprotein JH395_RS08445 PF02441 Flavoprotein JH395_RS08450 PF01192 RNA polymerase Rpb6 JH395_RS08455 PF00625 Guanylate kinase JH395_RS08465 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS08470 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JH395_RS08475 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS08480 PF00005 ABC transporter JH395_RS08480 PF00571 CBS domain JH395_RS08485 PF13476 AAA domain JH395_RS08490 PF01316 Arginine repressor, DNA binding domain JH395_RS08490 PF02863 Arginine repressor, C-terminal domain JH395_RS08495 PF01728 FtsJ-like methyltransferase JH395_RS08495 PF01479 S4 domain JH395_RS08500 PF00348 Polyprenyl synthetase JH395_RS08505 PF02609 Exonuclease VII small subunit JH395_RS08510 PF13742 OB-fold nucleic acid binding domain JH395_RS08510 PF02601 Exonuclease VII, large subunit JH395_RS08515 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JH395_RS08515 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JH395_RS08520 PF01029 NusB family JH395_RS08525 PF03780 Asp23 family, cell envelope-related function JH395_RS08530 PF01132 Elongation factor P (EF-P) OB domain JH395_RS08530 PF08207 Elongation factor P (EF-P) KOW-like domain JH395_RS08530 PF09285 Elongation factor P, C-terminal JH395_RS08535 PF01321 Creatinase/Prolidase N-terminal domain JH395_RS08535 PF00557 Metallopeptidase family M24 JH395_RS08540 PF01016 Ribosomal L27 protein JH395_RS08550 PF00829 Ribosomal prokaryotic L21 protein JH395_RS08565 PF13936 Helix-turn-helix domain JH395_RS08565 PF00665 Integrase core domain JH395_RS08605 PF00120 Glutamine synthetase, catalytic domain JH395_RS08605 PF03951 Glutamine synthetase, beta-Grasp domain JH395_RS08610 PF13411 MerR HTH family regulatory protein JH395_RS08620 PF03009 Glycerophosphoryl diester phosphodiesterase family JH395_RS08640 PF00480 ROK family JH395_RS08650 PF01694 Rhomboid family JH395_RS08655 PF01812 5-formyltetrahydrofolate cyclo-ligase family JH395_RS08660 PF00471 Ribosomal protein L33 JH395_RS08665 PF03717 Penicillin-binding Protein dimerisation domain JH395_RS08665 PF00905 Penicillin binding protein transpeptidase domain JH395_RS08675 PF01521 Iron-sulphur cluster biosynthesis JH395_RS08690 PF01272 Transcription elongation factor, GreA/GreB, C-term JH395_RS08690 PF03449 Transcription elongation factor, N-terminal JH395_RS08695 PF00485 Phosphoribulokinase / Uridine kinase family JH395_RS08700 PF02618 YceG-like family JH395_RS08705 PF03483 B3/4 domain JH395_RS08705 PF03484 tRNA synthetase B5 domain JH395_RS08705 PF03147 Ferredoxin-fold anticodon binding domain JH395_RS08705 PF01588 Putative tRNA binding domain JH395_RS08705 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JH395_RS08710 PF01409 tRNA synthetases class II core domain (F) JH395_RS08710 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JH395_RS08715 PF01638 HxlR-like helix-turn-helix JH395_RS08725 PF00588 SpoU rRNA Methylase family JH395_RS08725 PF08032 RNA 2'-O ribose methyltransferase substrate binding JH395_RS08730 PF00708 Acylphosphatase JH395_RS08735 PF02096 60Kd inner membrane protein JH395_RS08745 PF00149 Calcineurin-like phosphoesterase JH395_RS08745 PF12320 Type 5 capsule protein repressor C-terminal domain JH395_RS08750 PF13476 AAA domain JH395_RS08760 PF18719 ArlS sensor domain JH395_RS08760 PF00512 His Kinase A (phospho-acceptor) domain JH395_RS08760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH395_RS08765 PF00072 Response regulator receiver domain JH395_RS08765 PF00486 Transcriptional regulatory protein, C terminal JH395_RS08770 PF12002 MgsA AAA+ ATPase C terminal JH395_RS08770 PF16193 AAA C-terminal domain JH395_RS08770 PF00004 ATPase family associated with various cellular activities (AAA) JH395_RS08775 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JH395_RS08775 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JH395_RS08790 PF01783 Ribosomal L32p protein family JH395_RS08800 PF05636 HIGH Nucleotidyl Transferase JH395_RS08805 PF13649 Methyltransferase domain JH395_RS08815 PF01966 HD domain JH395_RS08820 PF01467 Cytidylyltransferase-like JH395_RS08825 PF01985 CRS1 / YhbY (CRM) domain JH395_RS08830 PF01926 50S ribosome-binding GTPase JH395_RS08845 PF00535 Glycosyl transferase family 2 JH395_RS08850 PF01177 Asp/Glu/Hydantoin racemase JH395_RS08855 PF01638 HxlR-like helix-turn-helix JH395_RS08860 PF08240 Alcohol dehydrogenase GroES-like domain JH395_RS08860 PF00107 Zinc-binding dehydrogenase JH395_RS08865 PF12002 MgsA AAA+ ATPase C terminal JH395_RS08865 PF16193 AAA C-terminal domain JH395_RS08865 PF05496 Holliday junction DNA helicase RuvB P-loop domain JH395_RS08875 PF00453 Ribosomal protein L20 JH395_RS08880 PF01632 Ribosomal protein L35 JH395_RS08885 PF00707 Translation initiation factor IF-3, C-terminal domain JH395_RS08885 PF05198 Translation initiation factor IF-3, N-terminal domain JH395_RS08890 PF02824 TGS domain JH395_RS08890 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JH395_RS08890 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JH395_RS08890 PF03129 Anticodon binding domain JH395_RS08895 PF01695 IstB-like ATP binding protein JH395_RS08895 PF07319 Primosomal protein DnaI N-terminus JH395_RS08900 PF07261 Replication initiation and membrane attachment JH395_RS08905 PF03477 ATP cone domain JH395_RS08910 PF01121 Dephospho-CoA kinase JH395_RS08915 PF06827 Zinc finger found in FPG and IleRS JH395_RS08915 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JH395_RS08915 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JH395_RS08920 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JH395_RS08920 PF00476 DNA polymerase family A JH395_RS08920 PF01367 5'-3' exonuclease, C-terminal SAM fold JH395_RS08925 PF01027 Inhibitor of apoptosis-promoting Bax1 JH395_RS08935 PF01883 Iron-sulfur cluster assembly protein JH395_RS08940 PF01458 Uncharacterized protein family (UPF0051) JH395_RS08945 PF01592 NifU-like N terminal domain JH395_RS08950 PF00266 Aminotransferase class-V JH395_RS08955 PF01458 Uncharacterized protein family (UPF0051) JH395_RS08960 PF00005 ABC transporter JH395_RS08970 PF02421 Ferrous iron transport protein B JH395_RS08970 PF17910 FeoB cytosolic helical domain JH395_RS08970 PF07664 Ferrous iron transport protein B C terminus JH395_RS08970 PF07670 Nucleoside recognition JH395_RS08980 PF02875 Mur ligase family, glutamate ligase domain JH395_RS08980 PF08245 Mur ligase middle domain JH395_RS08980 PF01225 Mur ligase family, catalytic domain JH395_RS08985 PF17854 FtsK alpha domain JH395_RS08985 PF09397 Ftsk gamma domain JH395_RS08985 PF01580 FtsK/SpoIIIE family JH395_RS08990 PF14794 Domain of unknown function (DUF4479) JH395_RS08990 PF01588 Putative tRNA binding domain JH395_RS09000 PF02390 Putative methyltransferase JH395_RS09005 PF01636 Phosphotransferase enzyme family JH395_RS09010 PF05975 Bacterial ABC transporter protein EcsB JH395_RS09015 PF00005 ABC transporter JH395_RS09020 PF01230 HIT domain JH395_RS09030 PF00639 PPIC-type PPIASE domain JH395_RS09060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JH395_RS09060 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH395_RS09070 PF13545 Crp-like helix-turn-helix domain JH395_RS09070 PF00027 Cyclic nucleotide-binding domain JH395_RS09090 PF00885 6,7-dimethyl-8-ribityllumazine synthase JH395_RS09095 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JH395_RS09095 PF00925 GTP cyclohydrolase II JH395_RS09100 PF00677 Lumazine binding domain JH395_RS09105 PF01872 RibD C-terminal domain JH395_RS09105 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JH395_RS09125 PF00535 Glycosyl transferase family 2 JH395_RS09140 PF03358 NADPH-dependent FMN reductase JH395_RS09140 PF04205 FMN-binding domain JH395_RS09140 PF00890 FAD binding domain JH395_RS09145 PF00890 FAD binding domain JH395_RS09145 PF03358 NADPH-dependent FMN reductase JH395_RS09145 PF04205 FMN-binding domain JH395_RS09150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH395_RS09150 PF03466 LysR substrate binding domain JH395_RS09165 PF01966 HD domain JH395_RS09170 PF13514 AAA domain JH395_RS09175 PF00149 Calcineurin-like phosphoesterase JH395_RS09180 PF06133 Control of competence regulator ComK, YlbF/YmcA JH395_RS09185 PF00912 Transglycosylase JH395_RS09185 PF00905 Penicillin binding protein transpeptidase domain JH395_RS09190 PF01316 Arginine repressor, DNA binding domain JH395_RS09190 PF02863 Arginine repressor, C-terminal domain JH395_RS09195 PF00155 Aminotransferase class I and II JH395_RS09205 PF00392 Bacterial regulatory proteins, gntR family JH395_RS09205 PF00155 Aminotransferase class I and II JH395_RS09210 PF00550 Phosphopantetheine attachment site JH395_RS09215 PF03734 L,D-transpeptidase catalytic domain JH395_RS09225 PF00232 Glycosyl hydrolase family 1 JH395_RS09230 PF02378 Phosphotransferase system, EIIC JH395_RS09235 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JH395_RS09240 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JH395_RS09250 PF00874 PRD domain JH395_RS09250 PF00158 Sigma-54 interaction domain JH395_RS09260 PF00005 ABC transporter JH395_RS09260 PF02687 FtsX-like permease family JH395_RS09260 PF12704 MacB-like periplasmic core domain JH395_RS09270 PF00750 tRNA synthetases class I (R) JH395_RS09270 PF03485 Arginyl tRNA synthetase N terminal domain JH395_RS09270 PF05746 DALR anticodon binding domain JH395_RS09275 PF13673 Acetyltransferase (GNAT) domain JH395_RS09295 PF01554 MatE JH395_RS09300 PF03600 Citrate transporter JH395_RS09300 PF02080 TrkA-C domain JH395_RS09310 PF01368 DHH family JH395_RS09310 PF02272 DHHA1 domain JH395_RS09320 PF14306 PUA-like domain JH395_RS09320 PF01747 ATP-sulfurylase JH395_RS09330 PF08267 Cobalamin-independent synthase, N-terminal domain JH395_RS09330 PF01717 Cobalamin-independent synthase, Catalytic domain JH395_RS09335 PF02219 Methylenetetrahydrofolate reductase JH395_RS09335 PF02574 Homocysteine S-methyltransferase JH395_RS09340 PF07457 Protein of unknown function (DUF1516) JH395_RS09535 PF01695 IstB-like ATP binding protein JH395_RS09605 PF09669 Phage regulatory protein Rha (Phage_pRha) JH395_RS09605 PF10549 ORF11CD3 domain JH395_RS09620 PF01381 Helix-turn-helix JH395_RS09665 PF17755 UvrA DNA-binding domain JH395_RS09665 PF00005 ABC transporter JH395_RS09665 PF17760 UvrA interaction domain JH395_RS09680 PF01047 MarR family JH395_RS09700 PF00072 Response regulator receiver domain JH395_RS09700 PF04397 LytTr DNA-binding domain JH395_RS09730 PF13411 MerR HTH family regulatory protein JH395_RS09735 PF01625 Peptide methionine sulfoxide reductase JH395_RS09745 PF00072 Response regulator receiver domain JH395_RS09745 PF04397 LytTr DNA-binding domain JH395_RS09750 PF00005 ABC transporter JH395_RS09770 PF01741 Large-conductance mechanosensitive channel, MscL JH395_RS09775 PF01712 Deoxynucleoside kinase JH395_RS09780 PF03009 Glycerophosphoryl diester phosphodiesterase family JH395_RS09790 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS09795 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS09800 PF00005 ABC transporter JH395_RS09800 PF17912 MalK OB fold domain JH395_RS09810 PF01546 Peptidase family M20/M25/M40 JH395_RS09815 PF01256 Carbohydrate kinase JH395_RS09820 PF00849 RNA pseudouridylate synthase JH395_RS09820 PF01479 S4 domain JH395_RS09825 PF14667 Polysaccharide biosynthesis C-terminal domain JH395_RS09825 PF01943 Polysaccharide biosynthesis protein JH395_RS09830 PF00133 tRNA synthetases class I (I, L, M and V) JH395_RS09830 PF08264 Anticodon-binding domain of tRNA JH395_RS09830 PF13603 Leucyl-tRNA synthetase, Domain 2 JH395_RS09830 PF09334 tRNA synthetases class I (M) JH395_RS09835 PF01569 PAP2 superfamily JH395_RS09840 PF06962 Putative rRNA methylase JH395_RS09850 PF00534 Glycosyl transferases group 1 JH395_RS09855 PF00534 Glycosyl transferases group 1 JH395_RS09855 PF00862 Sucrose synthase JH395_RS09870 PF07690 Major Facilitator Superfamily JH395_RS09875 PF00438 S-adenosylmethionine synthetase, N-terminal domain JH395_RS09875 PF02772 S-adenosylmethionine synthetase, central domain JH395_RS09875 PF02773 S-adenosylmethionine synthetase, C-terminal domain JH395_RS09885 PF00862 Sucrose synthase JH395_RS09885 PF00534 Glycosyl transferases group 1 JH395_RS09890 PF02574 Homocysteine S-methyltransferase JH395_RS09895 PF00324 Amino acid permease JH395_RS09900 PF00762 Ferrochelatase JH395_RS09905 PF01566 Natural resistance-associated macrophage protein JH395_RS09910 PF00149 Calcineurin-like phosphoesterase JH395_RS09930 PF00156 Phosphoribosyl transferase domain JH395_RS10015 PF00884 Sulfatase JH395_RS10020 PF08796 Protein of unknown function (DUF1797) JH395_RS10025 PF00155 Aminotransferase class I and II JH395_RS10030 PF00768 D-alanyl-D-alanine carboxypeptidase JH395_RS10030 PF07943 Penicillin-binding protein 5, C-terminal domain JH395_RS10040 PF13439 Glycosyltransferase Family 4 JH395_RS10040 PF00534 Glycosyl transferases group 1 JH395_RS10045 PF13439 Glycosyltransferase Family 4 JH395_RS10045 PF00534 Glycosyl transferases group 1 JH395_RS10050 PF02896 PEP-utilising enzyme, TIM barrel domain JH395_RS10050 PF05524 PEP-utilising enzyme, N-terminal JH395_RS10050 PF00391 PEP-utilising enzyme, mobile domain JH395_RS10055 PF00381 PTS HPr component phosphorylation site JH395_RS10065 PF07724 AAA domain (Cdc48 subfamily) JH395_RS10065 PF00004 ATPase family associated with various cellular activities (AAA) JH395_RS10065 PF17871 AAA lid domain JH395_RS10065 PF10431 C-terminal, D2-small domain, of ClpB protein JH395_RS10070 PF00589 Phage integrase family JH395_RS10080 PF00005 ABC transporter JH395_RS10080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JH395_RS10085 PF00005 ABC transporter JH395_RS10085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JH395_RS10090 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS10090 PF12911 N-terminal TM domain of oligopeptide transport permease C JH395_RS10095 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS10100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JH395_RS10115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH395_RS10115 PF03466 LysR substrate binding domain JH395_RS10130 PF00009 Elongation factor Tu GTP binding domain JH395_RS10130 PF16658 Class II release factor RF3, C-terminal domain JH395_RS10130 PF03144 Elongation factor Tu domain 2 JH395_RS10135 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JH395_RS10135 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH395_RS10140 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JH395_RS10140 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JH395_RS10145 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JH395_RS10145 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JH395_RS10150 PF02447 GntP family permease JH395_RS10155 PF01467 Cytidylyltransferase-like JH395_RS10160 PF01594 AI-2E family transporter JH395_RS10165 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JH395_RS10165 PF00056 lactate/malate dehydrogenase, NAD binding domain JH395_RS10170 PF00144 Beta-lactamase JH395_RS10185 PF08239 Bacterial SH3 domain JH395_RS10185 PF01476 LysM domain JH395_RS10185 PF00877 NlpC/P60 family JH395_RS10190 PF04167 Protein of unknown function (DUF402) JH395_RS10195 PF02631 RecX family JH395_RS10230 PF02397 Bacterial sugar transferase JH395_RS10245 PF00746 LPXTG cell wall anchor motif JH395_RS10260 PF04321 RmlD substrate binding domain JH395_RS10265 PF16363 GDP-mannose 4,6 dehydratase JH395_RS10270 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JH395_RS10275 PF00483 Nucleotidyl transferase JH395_RS10305 PF00132 Bacterial transferase hexapeptide (six repeats) JH395_RS10310 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JH395_RS10310 PF00535 Glycosyl transferase family 2 JH395_RS10340 PF00230 Major intrinsic protein JH395_RS10350 PF02350 UDP-N-acetylglucosamine 2-epimerase JH395_RS10360 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JH395_RS10360 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JH395_RS10385 PF02378 Phosphotransferase system, EIIC JH395_RS10400 PF00271 Helicase conserved C-terminal domain JH395_RS10400 PF00270 DEAD/DEAH box helicase JH395_RS10405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JH395_RS10405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JH395_RS10410 PF00313 'Cold-shock' DNA-binding domain JH395_RS10425 PF01380 SIS domain JH395_RS10425 PF01418 Helix-turn-helix domain, rpiR family JH395_RS10435 PF02378 Phosphotransferase system, EIIC JH395_RS10450 PF05958 tRNA (Uracil-5-)-methyltransferase JH395_RS10450 PF01938 TRAM domain JH395_RS10455 PF00781 Diacylglycerol kinase catalytic domain JH395_RS10460 PF02934 GatB/GatE catalytic domain JH395_RS10460 PF02637 GatB domain JH395_RS10465 PF01425 Amidase JH395_RS10470 PF02686 Glu-tRNAGln amidotransferase C subunit JH395_RS10475 PF07537 CamS sex pheromone cAM373 precursor JH395_RS10480 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JH395_RS10480 PF00533 BRCA1 C Terminus (BRCT) domain JH395_RS10480 PF12826 Helix-hairpin-helix motif JH395_RS10480 PF03120 NAD-dependent DNA ligase OB-fold domain JH395_RS10480 PF01653 NAD-dependent DNA ligase adenylation domain JH395_RS10485 PF00580 UvrD/REP helicase N-terminal domain JH395_RS10485 PF13361 UvrD-like helicase C-terminal domain JH395_RS10490 PF02222 ATP-grasp domain JH395_RS10490 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JH395_RS10495 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JH395_RS10505 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JH395_RS10505 PF13457 GW (Gly-Tryp) dipeptide domain JH395_RS10510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JH395_RS10510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JH395_RS10520 PF00348 Polyprenyl synthetase JH395_RS10530 PF00664 ABC transporter transmembrane region JH395_RS10530 PF00005 ABC transporter JH395_RS10535 PF00005 ABC transporter JH395_RS10535 PF00664 ABC transporter transmembrane region JH395_RS10540 PF02322 Cytochrome bd terminal oxidase subunit II JH395_RS10545 PF01654 Cytochrome bd terminal oxidase subunit I JH395_RS10565 PF13520 Amino acid permease JH395_RS10575 PF00390 Malic enzyme, N-terminal domain JH395_RS10575 PF03949 Malic enzyme, NAD binding domain JH395_RS10580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH395_RS10580 PF03466 LysR substrate binding domain JH395_RS10590 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase JH395_RS10590 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JH395_RS10595 PF14537 Cytochrome c3 JH395_RS10595 PF00890 FAD binding domain JH395_RS10600 PF10415 Fumarase C C-terminus JH395_RS10600 PF00206 Lyase JH395_RS10620 PF04223 Citrate lyase, alpha subunit (CitF) JH395_RS10625 PF03328 HpcH/HpaI aldolase/citrate lyase family JH395_RS10630 PF06857 Malonate decarboxylase delta subunit (MdcD) JH395_RS10635 PF08218 Citrate lyase ligase C-terminal domain JH395_RS10640 PF00390 Malic enzyme, N-terminal domain JH395_RS10640 PF03949 Malic enzyme, NAD binding domain JH395_RS10650 PF00939 Sodium:sulfate symporter transmembrane region JH395_RS10655 PF00056 lactate/malate dehydrogenase, NAD binding domain JH395_RS10655 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JH395_RS10665 PF01297 Zinc-uptake complex component A periplasmic JH395_RS10670 PF00950 ABC 3 transport family JH395_RS10675 PF00005 ABC transporter JH395_RS10680 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JH395_RS10685 PF02311 AraC-like ligand binding domain JH395_RS10685 PF12833 Helix-turn-helix domain JH395_RS10690 PF05681 Fumarate hydratase (Fumerase) JH395_RS10695 PF05683 Fumarase C-terminus JH395_RS10700 PF01883 Iron-sulfur cluster assembly protein JH395_RS10705 PF00939 Sodium:sulfate symporter transmembrane region JH395_RS10710 PF01761 3-dehydroquinate synthase JH395_RS10715 PF18152 DAHP synthase ferredoxin-like domain JH395_RS10715 PF00793 DAHP synthetase I family JH395_RS10720 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JH395_RS10720 PF08501 Shikimate dehydrogenase substrate binding domain JH395_RS10725 PF00456 Transketolase, thiamine diphosphate binding domain JH395_RS10725 PF02780 Transketolase, C-terminal domain JH395_RS10725 PF02779 Transketolase, pyrimidine binding domain JH395_RS10740 PF02645 Uncharacterised protein, DegV family COG1307 JH395_RS10745 PF00380 Ribosomal protein S9/S16 JH395_RS10750 PF00572 Ribosomal protein L13 JH395_RS10755 PF01416 tRNA pseudouridine synthase JH395_RS10760 PF02361 Cobalt transport protein JH395_RS10765 PF00005 ABC transporter JH395_RS10770 PF00005 ABC transporter JH395_RS10775 PF02424 ApbE family JH395_RS10780 PF04205 FMN-binding domain JH395_RS10800 PF00348 Polyprenyl synthetase JH395_RS10805 PF01196 Ribosomal protein L17 JH395_RS10810 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JH395_RS10810 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JH395_RS10810 PF01000 RNA polymerase Rpb3/RpoA insert domain JH395_RS10815 PF00411 Ribosomal protein S11 JH395_RS10820 PF00416 Ribosomal protein S13/S18 JH395_RS10825 PF00444 Ribosomal protein L36 JH395_RS10830 PF01176 Translation initiation factor 1A / IF-1 JH395_RS10835 PF05191 Adenylate kinase, active site lid JH395_RS10840 PF00344 SecY translocase JH395_RS10845 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JH395_RS10850 PF00327 Ribosomal protein L30p/L7e JH395_RS10855 PF03719 Ribosomal protein S5, C-terminal domain JH395_RS10855 PF00333 Ribosomal protein S5, N-terminal domain JH395_RS10860 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JH395_RS10865 PF00347 Ribosomal protein L6 JH395_RS10870 PF00410 Ribosomal protein S8 JH395_RS10875 PF00253 Ribosomal protein S14p/S29e JH395_RS10880 PF00281 Ribosomal protein L5 JH395_RS10880 PF00673 ribosomal L5P family C-terminus JH395_RS10885 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JH395_RS10885 PF00467 KOW motif JH395_RS10890 PF00238 Ribosomal protein L14p/L23e JH395_RS10895 PF00366 Ribosomal protein S17 JH395_RS10900 PF00831 Ribosomal L29 protein JH395_RS10905 PF00252 Ribosomal protein L16p/L10e JH395_RS10910 PF07650 KH domain JH395_RS10910 PF00189 Ribosomal protein S3, C-terminal domain JH395_RS10915 PF00237 Ribosomal protein L22p/L17e JH395_RS10920 PF00203 Ribosomal protein S19 JH395_RS10925 PF03947 Ribosomal Proteins L2, C-terminal domain JH395_RS10925 PF00181 Ribosomal Proteins L2, RNA binding domain JH395_RS10930 PF00276 Ribosomal protein L23 JH395_RS10935 PF00573 Ribosomal protein L4/L1 family JH395_RS10940 PF00297 Ribosomal protein L3 JH395_RS10945 PF00338 Ribosomal protein S10p/S20e JH395_RS10950 PF00009 Elongation factor Tu GTP binding domain JH395_RS10950 PF00679 Elongation factor G C-terminus JH395_RS10950 PF14492 Elongation Factor G, domain II JH395_RS10950 PF03144 Elongation factor Tu domain 2 JH395_RS10950 PF03764 Elongation factor G, domain IV JH395_RS10955 PF00177 Ribosomal protein S7p/S5e JH395_RS10960 PF00164 Ribosomal protein S12/S23 JH395_RS10965 PF01478 Type IV leader peptidase family JH395_RS10965 PF06750 Bacterial Peptidase A24 N-terminal domain JH395_RS10970 PF04998 RNA polymerase Rpb1, domain 5 JH395_RS10970 PF04997 RNA polymerase Rpb1, domain 1 JH395_RS10970 PF05000 RNA polymerase Rpb1, domain 4 JH395_RS10970 PF04983 RNA polymerase Rpb1, domain 3 JH395_RS10970 PF00623 RNA polymerase Rpb1, domain 2 JH395_RS10975 PF10385 RNA polymerase beta subunit external 1 domain JH395_RS10975 PF04565 RNA polymerase Rpb2, domain 3 JH395_RS10975 PF00562 RNA polymerase Rpb2, domain 6 JH395_RS10975 PF04563 RNA polymerase beta subunit JH395_RS10975 PF04561 RNA polymerase Rpb2, domain 2 JH395_RS10975 PF04560 RNA polymerase Rpb2, domain 7 JH395_RS10980 PF00440 Bacterial regulatory proteins, tetR family JH395_RS10980 PF08360 QacR-like protein, C-terminal region JH395_RS10985 PF00004 ATPase family associated with various cellular activities (AAA) JH395_RS10985 PF17871 AAA lid domain JH395_RS10985 PF02861 Clp amino terminal domain, pathogenicity island component JH395_RS10985 PF10431 C-terminal, D2-small domain, of ClpB protein JH395_RS10985 PF07724 AAA domain (Cdc48 subfamily) JH395_RS10990 PF17727 CtsR C-terminal dimerization domain JH395_RS10990 PF05848 CtsR N-terminal HTH domain JH395_RS11030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JH395_RS11030 PF02403 Seryl-tRNA synthetase N-terminal domain JH395_RS11035 PF01712 Deoxynucleoside kinase JH395_RS11045 PF00324 Amino acid permease JH395_RS11050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JH395_RS11050 PF00205 Thiamine pyrophosphate enzyme, central domain JH395_RS11050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JH395_RS11055 PF02082 Transcriptional regulator JH395_RS11075 PF03816 Cell envelope-related transcriptional attenuator domain JH395_RS11085 PF06738 Putative threonine/serine exporter JH395_RS11090 PF00313 'Cold-shock' DNA-binding domain JH395_RS11110 PF07690 Major Facilitator Superfamily JH395_RS11140 PF13537 Glutamine amidotransferase domain JH395_RS11140 PF00733 Asparagine synthase JH395_RS11145 PF00696 Amino acid kinase family JH395_RS11145 PF13840 ACT domain JH395_RS11150 PF01225 Mur ligase family, catalytic domain JH395_RS11150 PF02875 Mur ligase family, glutamate ligase domain JH395_RS11150 PF08245 Mur ligase middle domain JH395_RS11160 PF07859 alpha/beta hydrolase fold JH395_RS11170 PF00106 short chain dehydrogenase JH395_RS11170 PF00300 Histidine phosphatase superfamily (branch 1) JH395_RS11200 PF01022 Bacterial regulatory protein, arsR family JH395_RS11205 PF00849 RNA pseudouridylate synthase JH395_RS11210 PF09382 RQC domain JH395_RS11210 PF16124 RecQ zinc-binding JH395_RS11210 PF00271 Helicase conserved C-terminal domain JH395_RS11210 PF00270 DEAD/DEAH box helicase JH395_RS11210 PF00570 HRDC domain JH395_RS11230 PF03577 Peptidase family C69 JH395_RS11235 PF03590 Aspartate-ammonia ligase JH395_RS11240 PF00152 tRNA synthetases class II (D, K and N) JH395_RS11240 PF01336 OB-fold nucleic acid binding domain JH395_RS11245 PF02525 Flavodoxin-like fold JH395_RS11255 PF14537 Cytochrome c3 JH395_RS11255 PF00890 FAD binding domain JH395_RS11260 PF03466 LysR substrate binding domain JH395_RS11260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH395_RS11275 PF00485 Phosphoribulokinase / Uridine kinase family JH395_RS11285 PF06458 MucBP domain JH395_RS11305 PF11838 ERAP1-like C-terminal domain JH395_RS11305 PF01433 Peptidase family M1 domain JH395_RS11325 PF01557 Fumarylacetoacetate (FAA) hydrolase family JH395_RS11335 PF03780 Asp23 family, cell envelope-related function JH395_RS11350 PF04226 Transglycosylase associated protein JH395_RS11355 PF01757 Acyltransferase family JH395_RS11370 PF07690 Major Facilitator Superfamily JH395_RS11375 PF01638 HxlR-like helix-turn-helix JH395_RS11380 PF02517 CPBP intramembrane metalloprotease JH395_RS11390 PF01381 Helix-turn-helix JH395_RS11400 PF00958 GMP synthase C terminal domain JH395_RS11400 PF02540 NAD synthase JH395_RS11400 PF00117 Glutamine amidotransferase class-I JH395_RS11405 PF00485 Phosphoribulokinase / Uridine kinase family JH395_RS11410 PF03060 Nitronate monooxygenase JH395_RS11415 PF13538 UvrD-like helicase C-terminal domain JH395_RS11420 PF09335 SNARE associated Golgi protein JH395_RS11425 PF04229 GrpB protein JH395_RS11425 PF13673 Acetyltransferase (GNAT) domain JH395_RS11430 PF02080 TrkA-C domain JH395_RS11430 PF02254 TrkA-N domain JH395_RS11430 PF00999 Sodium/hydrogen exchanger family JH395_RS11435 PF00300 Histidine phosphatase superfamily (branch 1) JH395_RS11440 PF00300 Histidine phosphatase superfamily (branch 1) JH395_RS11450 PF00893 Small Multidrug Resistance protein JH395_RS11455 PF13344 Haloacid dehalogenase-like hydrolase JH395_RS11455 PF00293 NUDIX domain JH395_RS11460 PF16360 GTP-binding GTPase Middle Region JH395_RS11460 PF13167 GTP-binding GTPase N-terminal JH395_RS11460 PF01926 50S ribosome-binding GTPase JH395_RS11490 PF01047 MarR family JH395_RS11495 PF13520 Amino acid permease JH395_RS11500 PF04794 YdjC-like protein JH395_RS11505 PF02378 Phosphotransferase system, EIIC JH395_RS11505 PF00367 phosphotransferase system, EIIB JH395_RS11515 PF00367 phosphotransferase system, EIIB JH395_RS11515 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JH395_RS11515 PF02378 Phosphotransferase system, EIIC JH395_RS11520 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS11525 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS11530 PF00497 Bacterial extracellular solute-binding proteins, family 3 JH395_RS11535 PF00005 ABC transporter JH395_RS11545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JH395_RS11545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JH395_RS11550 PF00155 Aminotransferase class I and II JH395_RS11555 PF13419 Haloacid dehalogenase-like hydrolase JH395_RS11570 PF01475 Ferric uptake regulator family JH395_RS11575 PF00625 Guanylate kinase JH395_RS11585 PF00293 NUDIX domain JH395_RS11585 PF03099 Biotin/lipoate A/B protein ligase family JH395_RS11600 PF13520 Amino acid permease JH395_RS11615 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal JH395_RS11615 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JH395_RS11615 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain JH395_RS11620 PF01757 Acyltransferase family JH395_RS11630 PF00561 alpha/beta hydrolase fold JH395_RS11635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JH395_RS11635 PF00205 Thiamine pyrophosphate enzyme, central domain JH395_RS11635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JH395_RS11640 PF01687 Riboflavin kinase JH395_RS11640 PF06574 FAD synthetase JH395_RS11645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JH395_RS11645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JH395_RS11645 PF00205 Thiamine pyrophosphate enzyme, central domain JH395_RS11650 PF00860 Permease family JH395_RS11665 PF04991 LicD family JH395_RS11675 PF13090 Polyphosphate kinase C-terminal domain 2 JH395_RS11675 PF13089 Polyphosphate kinase N-terminal domain JH395_RS11675 PF17941 Polyphosphate kinase C-terminal domain 1 JH395_RS11675 PF02503 Polyphosphate kinase middle domain JH395_RS11680 PF02541 Ppx/GppA phosphatase family JH395_RS11680 PF01761 3-dehydroquinate synthase JH395_RS11685 PF07690 Major Facilitator Superfamily JH395_RS11700 PF03960 ArsC family JH395_RS11715 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JH395_RS11715 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JH395_RS11730 PF00881 Nitroreductase family JH395_RS11745 PF01263 Aldose 1-epimerase JH395_RS11765 PF01380 SIS domain JH395_RS11770 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JH395_RS11770 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JH395_RS11770 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JH395_RS11770 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JH395_RS11780 PF02457 DisA bacterial checkpoint controller nucleotide-binding JH395_RS11795 PF00999 Sodium/hydrogen exchanger family JH395_RS11800 PF01565 FAD binding domain JH395_RS11800 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JH395_RS11805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JH395_RS11810 PF03372 Endonuclease/Exonuclease/phosphatase family JH395_RS11815 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JH395_RS11815 PF14480 DNA polymerase III polC-type N-terminus I JH395_RS11815 PF11490 DNA polymerase III polC-type N-terminus II JH395_RS11815 PF07733 Bacterial DNA polymerase III alpha NTPase domain JH395_RS11815 PF00929 Exonuclease JH395_RS11815 PF14579 Helix-hairpin-helix motif JH395_RS11815 PF02811 PHP domain JH395_RS11825 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JH395_RS11830 PF01515 Phosphate acetyl/butaryl transferase JH395_RS11835 PF03167 Uracil DNA glycosylase superfamily JH395_RS11850 PF00005 ABC transporter JH395_RS11855 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS11865 PF01668 SmpB protein JH395_RS11870 PF08206 Ribonuclease B OB domain JH395_RS11870 PF00773 RNB domain JH395_RS11870 PF00575 S1 RNA binding domain JH395_RS11870 PF17876 Cold shock domain JH395_RS11875 PF12146 Serine aminopeptidase, S33 JH395_RS11880 PF03840 Preprotein translocase SecG subunit JH395_RS11885 PF00654 Voltage gated chloride channel JH395_RS11895 PF00113 Enolase, C-terminal TIM barrel domain JH395_RS11895 PF03952 Enolase, N-terminal domain JH395_RS11900 PF00121 Triosephosphate isomerase JH395_RS11905 PF00162 Phosphoglycerate kinase JH395_RS11910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JH395_RS11910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JH395_RS11915 PF04198 Putative sugar-binding domain JH395_RS11920 PF00309 Sigma-54 factor, Activator interacting domain (AID) JH395_RS11920 PF04552 Sigma-54, DNA binding domain JH395_RS11920 PF04963 Sigma-54 factor, core binding domain JH395_RS11930 PF00574 Clp protease JH395_RS11935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JH395_RS11935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JH395_RS11940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JH395_RS11945 PF02650 WhiA C-terminal HTH domain JH395_RS11945 PF10298 WhiA N-terminal LAGLIDADG-like domain JH395_RS11945 PF14527 WhiA LAGLIDADG-like domain JH395_RS11950 PF01933 Uncharacterised protein family UPF0052 JH395_RS11955 PF03668 P-loop ATPase protein family JH395_RS11965 PF14698 Argininosuccinate lyase C-terminal JH395_RS11965 PF00206 Lyase JH395_RS11970 PF00764 Arginosuccinate synthase JH395_RS11975 PF02664 S-Ribosylhomocysteinase (LuxS) JH395_RS11980 PF17760 UvrA interaction domain JH395_RS11980 PF00005 ABC transporter JH395_RS11980 PF17755 UvrA DNA-binding domain JH395_RS11985 PF17757 UvrB interaction domain JH395_RS11985 PF12344 Ultra-violet resistance protein B JH395_RS11985 PF00271 Helicase conserved C-terminal domain JH395_RS11985 PF04851 Type III restriction enzyme, res subunit JH395_RS11985 PF02151 UvrB/uvrC motif JH395_RS11995 PF07690 Major Facilitator Superfamily JH395_RS12015 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JH395_RS12015 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JH395_RS12015 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JH395_RS12015 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JH395_RS12025 PF04239 Protein of unknown function (DUF421) JH395_RS12030 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH395_RS12065 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH395_RS12065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JH395_RS12075 PF00483 Nucleotidyl transferase JH395_RS12080 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JH395_RS12080 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JH395_RS12085 PF01790 Prolipoprotein diacylglyceryl transferase JH395_RS12090 PF02603 HPr Serine kinase N terminus JH395_RS12090 PF07475 HPr Serine kinase C-terminal domain JH395_RS12095 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JH395_RS12100 PF04024 PspC domain JH395_RS12105 PF01895 PhoU domain JH395_RS12110 PF00005 ABC transporter JH395_RS12115 PF00005 ABC transporter JH395_RS12120 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS12125 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS12130 PF12849 PBP superfamily domain JH395_RS12135 PF00512 His Kinase A (phospho-acceptor) domain JH395_RS12135 PF16736 Single Cache-like JH395_RS12135 PF00989 PAS fold JH395_RS12135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JH395_RS12140 PF00072 Response regulator receiver domain JH395_RS12140 PF00486 Transcriptional regulatory protein, C terminal JH395_RS12145 PF17820 PDZ domain JH395_RS12155 PF07516 SecA Wing and Scaffold domain JH395_RS12155 PF07517 SecA DEAD-like domain JH395_RS12155 PF01043 SecA preprotein cross-linking domain JH395_RS12160 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JH395_RS12160 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JH395_RS12170 PF04851 Type III restriction enzyme, res subunit JH395_RS12170 PF00271 Helicase conserved C-terminal domain JH395_RS12175 PF01205 Uncharacterized protein family UPF0029 JH395_RS12175 PF09186 Domain of unknown function (DUF1949) JH395_RS12180 PF12849 PBP superfamily domain JH395_RS12185 PF00953 Glycosyl transferase family 4 JH395_RS12190 PF13520 Amino acid permease JH395_RS12195 PF00118 TCP-1/cpn60 chaperonin family JH395_RS12200 PF00166 Chaperonin 10 Kd subunit JH395_RS12205 PF02517 CPBP intramembrane metalloprotease JH395_RS12210 PF02629 CoA binding domain JH395_RS12210 PF06971 Putative DNA-binding protein N-terminus JH395_RS12215 PF00005 ABC transporter JH395_RS12215 PF12848 ABC transporter JH395_RS12215 PF16326 ABC transporter C-terminal domain JH395_RS12220 PF00814 Glycoprotease family JH395_RS12225 PF00583 Acetyltransferase (GNAT) family JH395_RS12230 PF00583 Acetyltransferase (GNAT) family JH395_RS12235 PF00814 Glycoprotease family JH395_RS12245 PF00005 ABC transporter JH395_RS12250 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS12255 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS12260 PF13419 Haloacid dehalogenase-like hydrolase JH395_RS12265 PF00266 Aminotransferase class-V JH395_RS12270 PF16363 GDP-mannose 4,6 dehydratase JH395_RS12280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JH395_RS12285 PF06156 Initiation control protein YabA JH395_RS12290 PF09115 DNA polymerase III, delta subunit, C terminal JH395_RS12295 PF06153 Cyclic-di-AMP receptor JH395_RS12300 PF02223 Thymidylate kinase JH395_RS12310 PF02132 RecR protein JH395_RS12310 PF13662 Toprim domain JH395_RS12315 PF02575 YbaB/EbfC DNA-binding family JH395_RS12320 PF12169 DNA polymerase III subunits gamma and tau domain III JH395_RS12330 PF14437 MafB19-like deaminase JH395_RS12335 PF05175 Methyltransferase small domain JH395_RS12340 PF00462 Glutaredoxin JH395_RS12345 PF08343 Ribonucleotide reductase N-terminal JH395_RS12345 PF00317 Ribonucleotide reductase, all-alpha domain JH395_RS12345 PF02867 Ribonucleotide reductase, barrel domain JH395_RS12350 PF00268 Ribonucleotide reductase, small chain JH395_RS12355 PF03641 Possible lysine decarboxylase JH395_RS12360 PF09924 Uncharacterised conserved protein (DUF2156) JH395_RS12360 PF03706 Lysylphosphatidylglycerol synthase TM region JH395_RS12375 PF16320 Ribosomal protein L7/L12 dimerisation domain JH395_RS12375 PF00542 Ribosomal protein L7/L12 C-terminal domain JH395_RS12380 PF00466 Ribosomal protein L10 JH395_RS12385 PF00687 Ribosomal protein L1p/L10e family JH395_RS12390 PF03946 Ribosomal protein L11, N-terminal domain JH395_RS12390 PF00298 Ribosomal protein L11, RNA binding domain JH395_RS12400 PF00467 KOW motif JH395_RS12400 PF02357 Transcription termination factor nusG JH395_RS12410 PF00471 Ribosomal protein L33 JH395_RS12425 PF00588 SpoU rRNA Methylase family JH395_RS12425 PF08032 RNA 2'-O ribose methyltransferase substrate binding JH395_RS12430 PF00636 Ribonuclease III domain JH395_RS12435 PF09190 DALR domain JH395_RS12435 PF01406 tRNA synthetases class I (C) catalytic domain JH395_RS12440 PF00749 tRNA synthetases class I (E and Q), catalytic domain JH395_RS12450 PF18073 Rubredoxin metal binding domain JH395_RS12455 PF00692 dUTPase JH395_RS12465 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JH395_RS12470 PF03051 Peptidase C1-like family JH395_RS12480 PF00300 Histidine phosphatase superfamily (branch 1) JH395_RS12485 PF00892 EamA-like transporter family JH395_RS12495 PF03816 Cell envelope-related transcriptional attenuator domain JH395_RS12500 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JH395_RS12505 PF01039 Carboxyl transferase domain JH395_RS12510 PF02785 Biotin carboxylase C-terminal domain JH395_RS12510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JH395_RS12510 PF00289 Biotin carboxylase, N-terminal domain JH395_RS12520 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JH395_RS12520 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JH395_RS12525 PF03610 PTS system fructose IIA component JH395_RS12525 PF03830 PTS system sorbose subfamily IIB component JH395_RS12530 PF03610 PTS system fructose IIA component JH395_RS12530 PF03830 PTS system sorbose subfamily IIB component JH395_RS12535 PF00158 Sigma-54 interaction domain JH395_RS12535 PF00874 PRD domain JH395_RS12535 PF03610 PTS system fructose IIA component JH395_RS12560 PF00501 AMP-binding enzyme JH395_RS12560 PF13193 AMP-binding enzyme C-terminal domain JH395_RS12560 PF00668 Condensation domain JH395_RS12560 PF00550 Phosphopantetheine attachment site JH395_RS12565 PF01966 HD domain JH395_RS12570 PF02261 Aspartate decarboxylase JH395_RS12575 PF00550 Phosphopantetheine attachment site JH395_RS12575 PF00668 Condensation domain JH395_RS12575 PF13193 AMP-binding enzyme C-terminal domain JH395_RS12575 PF00501 AMP-binding enzyme JH395_RS12580 PF03613 PTS system mannose/fructose/sorbose family IID component JH395_RS12585 PF03609 PTS system sorbose-specific iic component JH395_RS12590 PF03610 PTS system fructose IIA component JH395_RS12590 PF03830 PTS system sorbose subfamily IIB component JH395_RS12705 PF00574 Clp protease JH395_RS12865 PF01381 Helix-turn-helix JH395_RS12915 PF08544 GHMP kinases C terminal JH395_RS12915 PF00288 GHMP kinases N terminal domain JH395_RS12920 PF03447 Homoserine dehydrogenase, NAD binding domain JH395_RS12920 PF00742 Homoserine dehydrogenase JH395_RS12920 PF01842 ACT domain JH395_RS12925 PF10263 SprT-like family JH395_RS12930 PF09371 Tex-like protein N-terminal domain JH395_RS12930 PF17674 HHH domain JH395_RS12930 PF00575 S1 RNA binding domain JH395_RS12930 PF16921 Tex protein YqgF-like domain JH395_RS12940 PF00690 Cation transporter/ATPase, N-terminus JH395_RS12940 PF00689 Cation transporting ATPase, C-terminus JH395_RS12945 PF02540 NAD synthase JH395_RS12950 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JH395_RS12950 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JH395_RS12950 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JH395_RS12955 PF03808 Glycosyl transferase WecB/TagA/CpsF family JH395_RS12960 PF07702 UTRA domain JH395_RS12960 PF00392 Bacterial regulatory proteins, gntR family JH395_RS12965 PF01979 Amidohydrolase family JH395_RS12965 PF13382 Adenine deaminase C-terminal domain JH395_RS12970 PF03807 NADP oxidoreductase coenzyme F420-dependent JH395_RS12970 PF14748 Pyrroline-5-carboxylate reductase dimerisation JH395_RS12975 PF04973 Nicotinamide mononucleotide transporter JH395_RS13020 PF00854 POT family JH395_RS13060 PF01336 OB-fold nucleic acid binding domain JH395_RS13060 PF00152 tRNA synthetases class II (D, K and N) JH395_RS13065 PF01207 Dihydrouridine synthase (Dus) JH395_RS13070 PF01430 Hsp33 protein JH395_RS13075 PF00004 ATPase family associated with various cellular activities (AAA) JH395_RS13075 PF17862 AAA+ lid domain JH395_RS13075 PF06480 FtsH Extracellular JH395_RS13075 PF01434 Peptidase family M41 JH395_RS13080 PF11734 TilS substrate C-terminal domain JH395_RS13080 PF00156 Phosphoribosyl transferase domain JH395_RS13080 PF01171 PP-loop family JH395_RS13085 PF01171 PP-loop family JH395_RS13085 PF11734 TilS substrate C-terminal domain JH395_RS13090 PF00575 S1 RNA binding domain JH395_RS13100 PF01479 S4 domain JH395_RS13105 PF01943 Polysaccharide biosynthesis protein JH395_RS13105 PF14667 Polysaccharide biosynthesis C-terminal domain JH395_RS13110 PF02559 CarD-like/TRCF domain JH395_RS13110 PF17757 UvrB interaction domain JH395_RS13110 PF03461 TRCF domain JH395_RS13110 PF00270 DEAD/DEAH box helicase JH395_RS13110 PF00271 Helicase conserved C-terminal domain JH395_RS13115 PF01195 Peptidyl-tRNA hydrolase JH395_RS13120 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JH395_RS13120 PF00056 lactate/malate dehydrogenase, NAD binding domain JH395_RS13135 PF00561 alpha/beta hydrolase fold JH395_RS13140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JH395_RS13150 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JH395_RS13150 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JH395_RS13155 PF00202 Aminotransferase class-III JH395_RS13160 PF00696 Amino acid kinase family JH395_RS13165 PF01960 ArgJ family JH395_RS13170 PF01118 Semialdehyde dehydrogenase, NAD binding domain JH395_RS13170 PF02774 Semialdehyde dehydrogenase, dimerisation domain JH395_RS13175 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JH395_RS13175 PF00117 Glutamine amidotransferase class-I JH395_RS13180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JH395_RS13180 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JH395_RS13185 PF00005 ABC transporter JH395_RS13200 PF02705 K+ potassium transporter JH395_RS13205 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JH395_RS13210 PF00842 Alanine racemase, C-terminal domain JH395_RS13210 PF01168 Alanine racemase, N-terminal domain JH395_RS13215 PF01648 4'-phosphopantetheinyl transferase superfamily JH395_RS13220 PF00270 DEAD/DEAH box helicase JH395_RS13220 PF00271 Helicase conserved C-terminal domain JH395_RS13225 PF01225 Mur ligase family, catalytic domain JH395_RS13225 PF02875 Mur ligase family, glutamate ligase domain JH395_RS13225 PF08245 Mur ligase middle domain JH395_RS13235 PF01435 Peptidase family M48 JH395_RS13240 PF04011 LemA family JH395_RS13245 PF04203 Sortase domain JH395_RS13255 PF01197 Ribosomal protein L31 JH395_RS13260 PF07498 Rho termination factor, N-terminal domain JH395_RS13260 PF07497 Rho termination factor, RNA-binding domain JH395_RS13260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JH395_RS13265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JH395_RS13280 PF03313 Serine dehydratase alpha chain JH395_RS13285 PF03315 Serine dehydratase beta chain JH395_RS13285 PF01842 ACT domain JH395_RS13295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JH395_RS13295 PF02403 Seryl-tRNA synthetase N-terminal domain JH395_RS13300 PF06418 CTP synthase N-terminus JH395_RS13300 PF00117 Glutamine amidotransferase class-I JH395_RS13305 PF05066 HB1, ASXL, restriction endonuclease HTH domain JH395_RS13315 PF03099 Biotin/lipoate A/B protein ligase family JH395_RS13320 PF01966 HD domain JH395_RS13340 PF13936 Helix-turn-helix domain JH395_RS13340 PF00665 Integrase core domain JH395_RS13345 PF03788 LrgA family JH395_RS13350 PF04172 LrgB-like family JH395_RS13355 PF02645 Uncharacterised protein, DegV family COG1307 JH395_RS13365 PF04298 Putative neutral zinc metallopeptidase JH395_RS13370 PF01593 Flavin containing amine oxidoreductase JH395_RS13385 PF02595 Glycerate kinase family JH395_RS13390 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH395_RS13390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JH395_RS13400 PF10397 Adenylosuccinate lyase C-terminus JH395_RS13400 PF00206 Lyase JH395_RS13405 PF00709 Adenylosuccinate synthetase JH395_RS13410 PF00478 IMP dehydrogenase / GMP reductase domain JH395_RS13415 PF13350 Tyrosine phosphatase family JH395_RS13420 PF13396 Phospholipase_D-nuclease N-terminal JH395_RS13420 PF13091 PLD-like domain JH395_RS13435 PF13520 Amino acid permease JH395_RS13440 PF02705 K+ potassium transporter JH395_RS13445 PF16916 Dimerisation domain of Zinc Transporter JH395_RS13445 PF01545 Cation efflux family JH395_RS13450 PF01594 AI-2E family transporter JH395_RS13455 PF01717 Cobalamin-independent synthase, Catalytic domain JH395_RS13460 PF00893 Small Multidrug Resistance protein JH395_RS13465 PF00893 Small Multidrug Resistance protein JH395_RS13470 PF03006 Haemolysin-III related JH395_RS13475 PF01022 Bacterial regulatory protein, arsR family JH395_RS13480 PF01545 Cation efflux family JH395_RS13505 PF00809 Pterin binding enzyme JH395_RS13510 PF01725 Ham1 family JH395_RS13515 PF02875 Mur ligase family, glutamate ligase domain JH395_RS13515 PF08245 Mur ligase middle domain JH395_RS13520 PF01227 GTP cyclohydrolase I JH395_RS13525 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JH395_RS13540 PF01297 Zinc-uptake complex component A periplasmic JH395_RS13550 PF07690 Major Facilitator Superfamily JH395_RS13580 PF00144 Beta-lactamase JH395_RS13585 PF02901 Pyruvate formate lyase-like JH395_RS13585 PF01228 Glycine radical JH395_RS13590 PF04055 Radical SAM superfamily JH395_RS13595 PF01883 Iron-sulfur cluster assembly protein JH395_RS13600 PF00248 Aldo/keto reductase family JH395_RS13625 PF02028 BCCT, betaine/carnitine/choline family transporter JH395_RS13630 PF00403 Heavy-metal-associated domain JH395_RS13640 PF04237 YjbR JH395_RS13650 PF13382 Adenine deaminase C-terminal domain JH395_RS13650 PF01979 Amidohydrolase family JH395_RS13655 PF01380 SIS domain JH395_RS13670 PF03553 Na+/H+ antiporter family JH395_RS13675 PF00324 Amino acid permease JH395_RS13685 PF04608 Phosphatidylglycerophosphatase A JH395_RS13700 PF03960 ArsC family JH395_RS13705 PF04343 Protein of unknown function, DUF488 JH395_RS13715 PF00730 HhH-GPD superfamily base excision DNA repair protein JH395_RS13715 PF14815 NUDIX domain JH395_RS13730 PF00011 Hsp20/alpha crystallin family JH395_RS13755 PF00892 EamA-like transporter family JH395_RS13770 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JH395_RS13780 PF03965 Penicillinase repressor JH395_RS13795 PF07690 Major Facilitator Superfamily JH395_RS13820 PF00083 Sugar (and other) transporter JH395_RS13820 PF07690 Major Facilitator Superfamily JH395_RS13845 PF00689 Cation transporting ATPase, C-terminus JH395_RS13845 PF00690 Cation transporter/ATPase, N-terminus JH395_RS13850 PF00149 Calcineurin-like phosphoesterase JH395_RS13850 PF02872 5'-nucleotidase, C-terminal domain JH395_RS13860 PF00248 Aldo/keto reductase family JH395_RS13880 PF02673 Bacitracin resistance protein BacA JH395_RS13885 PF01661 Macro domain JH395_RS13920 PF12833 Helix-turn-helix domain JH395_RS13945 PF00282 Pyridoxal-dependent decarboxylase conserved domain JH395_RS13950 PF00877 NlpC/P60 family JH395_RS13985 PF00440 Bacterial regulatory proteins, tetR family JH395_RS13995 PF01209 ubiE/COQ5 methyltransferase family JH395_RS14010 PF00403 Heavy-metal-associated domain JH395_RS14015 PF00230 Major intrinsic protein JH395_RS14020 PF00085 Thioredoxin JH395_RS14025 PF02583 Metal-sensitive transcriptional repressor JH395_RS14045 PF00027 Cyclic nucleotide-binding domain JH395_RS14045 PF13545 Crp-like helix-turn-helix domain JH395_RS14050 PF05649 Peptidase family M13 JH395_RS14050 PF01431 Peptidase family M13 JH395_RS14065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JH395_RS14065 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH395_RS14115 PF00230 Major intrinsic protein JH395_RS14120 PF03109 ABC1 family JH395_RS14125 PF05525 Branched-chain amino acid transport protein JH395_RS14130 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JH395_RS14135 PF08532 Beta-galactosidase trimerisation domain JH395_RS14135 PF08533 Beta-galactosidase C-terminal domain JH395_RS14135 PF02449 Beta-galactosidase JH395_RS14140 PF00356 Bacterial regulatory proteins, lacI family JH395_RS14150 PF07690 Major Facilitator Superfamily JH395_RS14175 PF18543 Intracellular delivery domain JH395_RS14175 PF02661 Fic/DOC family JH395_RS14185 PF00356 Bacterial regulatory proteins, lacI family JH395_RS14190 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JH395_RS14190 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JH395_RS14195 PF16363 GDP-mannose 4,6 dehydratase JH395_RS14200 PF08544 GHMP kinases C terminal JH395_RS14200 PF00288 GHMP kinases N terminal domain JH395_RS14200 PF10509 Galactokinase galactose-binding signature JH395_RS14205 PF00703 Glycosyl hydrolases family 2 JH395_RS14205 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JH395_RS14205 PF02837 Glycosyl hydrolases family 2, sugar binding domain JH395_RS14210 PF02929 Beta galactosidase small chain JH395_RS14215 PF16875 Glycosyl hydrolase family 36 N-terminal domain JH395_RS14215 PF16874 Glycosyl hydrolase family 36 C-terminal domain JH395_RS14220 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JH395_RS14225 PF01263 Aldose 1-epimerase JH395_RS14230 PF00356 Bacterial regulatory proteins, lacI family JH395_RS14235 PF00248 Aldo/keto reductase family JH395_RS14245 PF04205 FMN-binding domain JH395_RS14245 PF03358 NADPH-dependent FMN reductase JH395_RS14245 PF00890 FAD binding domain JH395_RS14250 PF02424 ApbE family JH395_RS14255 PF01487 Type I 3-dehydroquinase JH395_RS14260 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JH395_RS14260 PF08501 Shikimate dehydrogenase substrate binding domain JH395_RS14265 PF03466 LysR substrate binding domain JH395_RS14265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH395_RS14270 PF07690 Major Facilitator Superfamily JH395_RS14275 PF08501 Shikimate dehydrogenase substrate binding domain JH395_RS14275 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JH395_RS14280 PF08501 Shikimate dehydrogenase substrate binding domain JH395_RS14280 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JH395_RS14295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JH395_RS14295 PF03466 LysR substrate binding domain JH395_RS14300 PF07690 Major Facilitator Superfamily JH395_RS14310 PF12697 Alpha/beta hydrolase family JH395_RS14315 PF07702 UTRA domain JH395_RS14315 PF00392 Bacterial regulatory proteins, gntR family JH395_RS14320 PF02378 Phosphotransferase system, EIIC JH395_RS14325 PF13580 SIS domain JH395_RS14330 PF01869 BadF/BadG/BcrA/BcrD ATPase family JH395_RS14340 PF00232 Glycosyl hydrolase family 1 JH395_RS14345 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JH395_RS14345 PF00367 phosphotransferase system, EIIB JH395_RS14345 PF02378 Phosphotransferase system, EIIC JH395_RS14350 PF03123 CAT RNA binding domain JH395_RS14350 PF00874 PRD domain JH395_RS14360 PF00155 Aminotransferase class I and II JH395_RS14365 PF02378 Phosphotransferase system, EIIC JH395_RS14365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JH395_RS14370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JH395_RS14370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JH395_RS14375 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JH395_RS14375 PF00367 phosphotransferase system, EIIB JH395_RS14375 PF02378 Phosphotransferase system, EIIC JH395_RS14380 PF01380 SIS domain JH395_RS14380 PF01418 Helix-turn-helix domain, rpiR family JH395_RS14385 PF02378 Phosphotransferase system, EIIC JH395_RS14385 PF00367 phosphotransferase system, EIIB JH395_RS14390 PF01380 SIS domain JH395_RS14400 PF00232 Glycosyl hydrolase family 1 JH395_RS14405 PF00232 Glycosyl hydrolase family 1 JH395_RS14410 PF00367 phosphotransferase system, EIIB JH395_RS14410 PF02378 Phosphotransferase system, EIIC JH395_RS14410 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JH395_RS14420 PF03633 Glycosyl hydrolase family 65, C-terminal domain JH395_RS14420 PF03632 Glycosyl hydrolase family 65 central catalytic domain JH395_RS14420 PF03636 Glycosyl hydrolase family 65, N-terminal domain JH395_RS14425 PF00356 Bacterial regulatory proteins, lacI family JH395_RS14435 PF16338 Domain of unknown function (DUF4968) JH395_RS14435 PF17137 Domain of unknown function (DUF5110) JH395_RS14435 PF01055 Glycosyl hydrolases family 31 JH395_RS14435 PF13802 Galactose mutarotase-like JH395_RS14445 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family JH395_RS14455 PF02779 Transketolase, pyrimidine binding domain JH395_RS14455 PF02780 Transketolase, C-terminal domain JH395_RS14455 PF00456 Transketolase, thiamine diphosphate binding domain JH395_RS14460 PF00923 Transaldolase/Fructose-6-phosphate aldolase JH395_RS14465 PF00834 Ribulose-phosphate 3 epimerase family JH395_RS14470 PF02378 Phosphotransferase system, EIIC JH395_RS14470 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JH395_RS14475 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JH395_RS14480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JH395_RS14480 PF00381 PTS HPr component phosphorylation site JH395_RS14490 PF05043 Mga helix-turn-helix domain JH395_RS14490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JH395_RS14490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JH395_RS14490 PF08279 HTH domain JH395_RS14490 PF00874 PRD domain JH395_RS14495 PF08240 Alcohol dehydrogenase GroES-like domain JH395_RS14495 PF00107 Zinc-binding dehydrogenase JH395_RS14500 PF03611 PTS system sugar-specific permease component JH395_RS14505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JH395_RS14515 PF00455 DeoR C terminal sensor domain JH395_RS14515 PF08220 DeoR-like helix-turn-helix domain JH395_RS14520 PF09364 XFP N-terminal domain JH395_RS14520 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase JH395_RS14520 PF09363 XFP C-terminal domain JH395_RS14530 PF14602 Hexapeptide repeat of succinyl-transferase JH395_RS14530 PF12464 Maltose acetyltransferase JH395_RS14535 PF02610 L-arabinose isomerase JH395_RS14535 PF11762 L-arabinose isomerase C-terminal domain JH395_RS14540 PF00596 Class II Aldolase and Adducin N-terminal domain JH395_RS14550 PF00083 Sugar (and other) transporter JH395_RS14555 PF00392 Bacterial regulatory proteins, gntR family JH395_RS14560 PF01380 SIS domain JH395_RS14560 PF01418 Helix-turn-helix domain, rpiR family JH395_RS14580 PF00474 Sodium:solute symporter family JH395_RS14585 PF00999 Sodium/hydrogen exchanger family JH395_RS14595 PF00480 ROK family JH395_RS14595 PF01047 MarR family JH395_RS14600 PF00701 Dihydrodipicolinate synthetase family JH395_RS14605 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JH395_RS14610 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH395_RS14610 PF14759 Reductase C-terminal JH395_RS14625 PF04226 Transglycosylase associated protein JH395_RS14630 PF06628 Catalase-related immune-responsive JH395_RS14630 PF00199 Catalase JH395_RS14635 PF03960 ArsC family JH395_RS14640 PF00072 Response regulator receiver domain JH395_RS14640 PF04397 LytTr DNA-binding domain JH395_RS14655 PF04647 Accessory gene regulator B JH395_RS14660 PF10431 C-terminal, D2-small domain, of ClpB protein JH395_RS14660 PF00004 ATPase family associated with various cellular activities (AAA) JH395_RS14660 PF17871 AAA lid domain JH395_RS14660 PF07724 AAA domain (Cdc48 subfamily) JH395_RS14670 PF01070 FMN-dependent dehydrogenase JH395_RS14675 PF00205 Thiamine pyrophosphate enzyme, central domain JH395_RS14675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JH395_RS14675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JH395_RS14680 PF02082 Transcriptional regulator JH395_RS14685 PF00205 Thiamine pyrophosphate enzyme, central domain JH395_RS14685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JH395_RS14685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JH395_RS14700 PF00596 Class II Aldolase and Adducin N-terminal domain JH395_RS14705 PF06134 L-rhamnose isomerase (RhaA) JH395_RS14710 PF05336 L-rhamnose mutarotase JH395_RS14715 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JH395_RS14715 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JH395_RS14720 PF07690 Major Facilitator Superfamily JH395_RS14725 PF17853 GGDEF-like domain JH395_RS14725 PF12833 Helix-turn-helix domain JH395_RS14730 PF00455 DeoR C terminal sensor domain JH395_RS14730 PF08220 DeoR-like helix-turn-helix domain JH395_RS14745 PF03611 PTS system sugar-specific permease component JH395_RS14750 PF13276 HTH-like domain JH395_RS14750 PF00665 Integrase core domain JH395_RS14750 PF13333 Integrase core domain JH395_RS14760 PF06800 Sugar transport protein JH395_RS14765 PF05025 RbsD / FucU transport protein family JH395_RS14770 PF00294 pfkB family carbohydrate kinase JH395_RS14770 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JH395_RS14775 PF00356 Bacterial regulatory proteins, lacI family JH395_RS14780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JH395_RS14780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JH395_RS14785 PF01261 Xylose isomerase-like TIM barrel JH395_RS14790 PF00480 ROK family JH395_RS14795 PF13802 Galactose mutarotase-like JH395_RS14795 PF01055 Glycosyl hydrolases family 31 JH395_RS14805 PF00171 Aldehyde dehydrogenase family JH395_RS14805 PF00465 Iron-containing alcohol dehydrogenase JH395_RS14815 PF10400 Virulence activator alpha C-term JH395_RS14815 PF03551 Transcriptional regulator PadR-like family JH395_RS14820 PF05870 Phenolic acid decarboxylase (PAD) JH395_RS14835 PF02645 Uncharacterised protein, DegV family COG1307 JH395_RS14845 PF03051 Peptidase C1-like family JH395_RS14850 PF10502 Signal peptidase, peptidase S26 JH395_RS14875 PF13932 GidA associated domain JH395_RS14875 PF01134 Glucose inhibited division protein A JH395_RS14880 PF01926 50S ribosome-binding GTPase JH395_RS14880 PF12631 MnmE helical domain JH395_RS14880 PF10396 GTP-binding protein TrmE N-terminus JH395_RS14885 PF14804 Jag N-terminus JH395_RS14885 PF01424 R3H domain JH395_RS14890 PF02096 60Kd inner membrane protein JH395_RS14895 PF00825 Ribonuclease P JH395_RS14900 PF00468 Ribosomal protein L34 JH395_RS14970 PF08708 Primase C terminal 1 (PriCT-1) JH395_RS14975 PF13614 AAA domain JH395_RS14990 PF00817 impB/mucB/samB family JH395_RS14990 PF11799 impB/mucB/samB family C-terminal domain JH395_RS14990 PF11798 IMS family HHH motif JH395_RS15025 PF01653 NAD-dependent DNA ligase adenylation domain JH395_RS15025 PF12826 Helix-hairpin-helix motif JH395_RS15025 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JH395_RS15025 PF03120 NAD-dependent DNA ligase OB-fold domain JH395_RS15025 PF00533 BRCA1 C Terminus (BRCT) domain JH395_RS15045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JH395_RS15045 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH395_RS15055 PF07563 Protein of unknown function (DUF1541) JH395_RS15065 PF13732 Domain of unknown function (DUF4162) JH395_RS15065 PF00005 ABC transporter JH395_RS15095 PF01914 MarC family integral membrane protein JH395_RS15105 PF02796 Helix-turn-helix domain of resolvase JH395_RS15105 PF00239 Resolvase, N terminal domain JH395_RS15160 PF01022 Bacterial regulatory protein, arsR family JH395_RS15165 PF02374 Anion-transporting ATPase JH395_RS15170 PF02040 Arsenical pump membrane protein JH395_RS15175 PF06953 Arsenical resistance operon trans-acting repressor ArsD JH395_RS15180 PF01451 Low molecular weight phosphotyrosine protein phosphatase JH395_RS15190 PF00056 lactate/malate dehydrogenase, NAD binding domain JH395_RS15190 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JH395_RS15195 PF13936 Helix-turn-helix domain JH395_RS15195 PF00665 Integrase core domain JH395_RS15205 PF13472 GDSL-like Lipase/Acylhydrolase family JH395_RS15205 PF07859 alpha/beta hydrolase fold JH395_RS15210 PF00239 Resolvase, N terminal domain JH395_RS15210 PF02796 Helix-turn-helix domain of resolvase JH395_RS15215 PF12008 Type I restriction and modification enzyme - subunit R C terminal JH395_RS15215 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JH395_RS15215 PF18766 SWI2/SNF2 ATPase JH395_RS15220 PF12161 HsdM N-terminal domain JH395_RS15220 PF02384 N-6 DNA Methylase JH395_RS15265 PF10431 C-terminal, D2-small domain, of ClpB protein JH395_RS15265 PF07724 AAA domain (Cdc48 subfamily) JH395_RS15265 PF00004 ATPase family associated with various cellular activities (AAA) JH395_RS15265 PF17871 AAA lid domain JH395_RS15280 PF13154 Protein of unknown function (DUF3991) JH395_RS15285 PF01131 DNA topoisomerase JH395_RS15285 PF01751 Toprim domain JH395_RS15325 PF06970 Replication initiator protein A (RepA) N-terminus JH395_RS15325 PF18008 Replication initiator protein A C-terminal domain JH395_RS15350 PF16793 RepB DNA-primase from phage plasmid JH395_RS15350 PF03389 MobA/MobL family JH395_RS15365 PF14537 Cytochrome c3 JH395_RS15365 PF00890 FAD binding domain JH395_RS15370 PF02796 Helix-turn-helix domain of resolvase JH395_RS15370 PF00239 Resolvase, N terminal domain JH395_RS15380 PF00072 Response regulator receiver domain JH395_RS15380 PF04397 LytTr DNA-binding domain JH395_RS15385 PF03960 ArsC family JH395_RS15390 PF04226 Transglycosylase associated protein JH395_RS15400 PF07563 Protein of unknown function (DUF1541) JH395_RS15405 PF13936 Helix-turn-helix domain JH395_RS15405 PF00665 Integrase core domain JH395_RS15430 PF06100 MCRA family JH395_RS15440 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) JH395_RS15450 PF07690 Major Facilitator Superfamily JH395_RS15455 PF04230 Polysaccharide pyruvyl transferase JH395_RS15460 PF00083 Sugar (and other) transporter JH395_RS15465 PF04226 Transglycosylase associated protein JH395_RS15485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JH395_RS15485 PF00205 Thiamine pyrophosphate enzyme, central domain JH395_RS15485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JH395_RS15495 PF02733 Dak1 domain JH395_RS15505 PF02733 Dak1 domain JH395_RS15510 PF02734 DAK2 domain JH395_RS15515 PF00465 Iron-containing alcohol dehydrogenase JH395_RS15530 PF01047 MarR family JH395_RS15535 PF07992 Pyridine nucleotide-disulphide oxidoreductase JH395_RS15535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JH395_RS15545 PF02796 Helix-turn-helix domain of resolvase JH395_RS15545 PF00239 Resolvase, N terminal domain JH395_RS15550 PF06874 Firmicute fructose-1,6-bisphosphatase JH395_RS15555 PF02705 K+ potassium transporter JH395_RS15590 PF13614 AAA domain JH395_RS15640 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JH395_RS15640 PF12008 Type I restriction and modification enzyme - subunit R C terminal JH395_RS15640 PF18766 SWI2/SNF2 ATPase JH395_RS15670 PF00239 Resolvase, N terminal domain JH395_RS15670 PF02796 Helix-turn-helix domain of resolvase JH395_RS15685 PF13614 AAA domain JH395_RS15690 PF03459 TOBE domain JH395_RS15690 PF17912 MalK OB fold domain JH395_RS15690 PF00005 ABC transporter JH395_RS15695 PF01547 Bacterial extracellular solute-binding protein JH395_RS15700 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS15705 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS15780 PF02384 N-6 DNA Methylase JH395_RS15780 PF12161 HsdM N-terminal domain JH395_RS15785 PF02384 N-6 DNA Methylase JH395_RS15795 PF11867 Domain of unknown function (DUF3387) JH395_RS15795 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JH395_RS15795 PF18766 SWI2/SNF2 ATPase JH395_RS15830 PF16793 RepB DNA-primase from phage plasmid JH395_RS15830 PF03389 MobA/MobL family JH395_RS15905 PF01131 DNA topoisomerase JH395_RS15905 PF01751 Toprim domain JH395_RS15920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JH395_RS15920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JH395_RS15935 PF11798 IMS family HHH motif JH395_RS15935 PF11799 impB/mucB/samB family C-terminal domain JH395_RS15935 PF00817 impB/mucB/samB family JH395_RS15945 PF13333 Integrase core domain JH395_RS15945 PF00665 Integrase core domain JH395_RS15960 PF02796 Helix-turn-helix domain of resolvase JH395_RS15960 PF00239 Resolvase, N terminal domain JH395_RS15970 PF04794 YdjC-like protein JH395_RS15990 PF03609 PTS system sorbose-specific iic component JH395_RS15995 PF03830 PTS system sorbose subfamily IIB component JH395_RS15995 PF03610 PTS system fructose IIA component JH395_RS16000 PF00874 PRD domain JH395_RS16000 PF03610 PTS system fructose IIA component JH395_RS16000 PF00158 Sigma-54 interaction domain JH395_RS16010 PF00480 ROK family JH395_RS16020 PF07859 alpha/beta hydrolase fold JH395_RS16065 PF13614 AAA domain JH395_RS16095 PF00999 Sodium/hydrogen exchanger family JH395_RS16115 PF00005 ABC transporter JH395_RS16115 PF00571 CBS domain JH395_RS16120 PF00528 Binding-protein-dependent transport system inner membrane component JH395_RS16125 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JH395_RS16140 PF00582 Universal stress protein family JH395_RS16145 PF13610 DDE domain JH395_RS16150 PF13936 Helix-turn-helix domain JH395_RS16150 PF00665 Integrase core domain JH395_RS16155 PF02796 Helix-turn-helix domain of resolvase JH395_RS16155 PF00239 Resolvase, N terminal domain JH395_RS16170 PF00268 Ribonucleotide reductase, small chain JH395_RS16180 PF00317 Ribonucleotide reductase, all-alpha domain JH395_RS16180 PF08343 Ribonucleotide reductase N-terminal JH395_RS16180 PF02867 Ribonucleotide reductase, barrel domain JH395_RS16185 PF07972 NrdI Flavodoxin like JH395_RS16230 PF01471 Putative peptidoglycan binding domain JH395_RS16230 PF08924 Domain of unknown function (DUF1906) JH395_RS16240 PF00067 Cytochrome P450 JH395_RS16320 PF03432 Relaxase/Mobilisation nuclease domain JH395_RS16370 PF03949 Malic enzyme, NAD binding domain JH395_RS16370 PF00390 Malic enzyme, N-terminal domain JH395_RS16415 PF00210 Ferritin-like domain JH395_RS16420 PF08924 Domain of unknown function (DUF1906) JH395_RS16420 PF01471 Putative peptidoglycan binding domain JH395_RS16465 PF01381 Helix-turn-helix JH395_RS16485 PF00589 Phage integrase family JH395_RS16530 PF01076 Plasmid recombination enzyme JH395_RS16535 PF01446 Replication protein JH395_RS16540 PF01719 Plasmid replication protein JH395_RS16545 PF01402 Ribbon-helix-helix protein, copG family JH395_RS16550 PF01719 Plasmid replication protein