locus-tag class description DQQ11_RS00005 PF11638 DnaA N-terminal domain DQQ11_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix DQQ11_RS00005 PF00308 Bacterial dnaA protein DQQ11_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DQQ11_RS00010 PF02767 DNA polymerase III beta subunit, central domain DQQ11_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DQQ11_RS00020 PF02463 RecF/RecN/SMC N terminal domain DQQ11_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQQ11_RS00025 PF01751 Toprim domain DQQ11_RS00025 PF00204 DNA gyrase B DQQ11_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus DQQ11_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller DQQ11_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A DQQ11_RS00035 PF01250 Ribosomal protein S6 DQQ11_RS00040 PF00436 Single-strand binding protein family DQQ11_RS00045 PF01084 Ribosomal protein S18 DQQ11_RS00050 PF02272 DHHA1 domain DQQ11_RS00050 PF01368 DHH family DQQ11_RS00055 PF01281 Ribosomal protein L9, N-terminal domain DQQ11_RS00055 PF03948 Ribosomal protein L9, C-terminal domain DQQ11_RS00060 PF00772 DnaB-like helicase N terminal domain DQQ11_RS00060 PF03796 DnaB-like helicase C terminal domain DQQ11_RS00065 PF07690 Major Facilitator Superfamily DQQ11_RS00070 PF00696 Amino acid kinase family DQQ11_RS00075 PF00171 Aldehyde dehydrogenase family DQQ11_RS00080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DQQ11_RS00085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DQQ11_RS00085 PF02806 Alpha amylase, C-terminal all-beta domain DQQ11_RS00085 PF00128 Alpha amylase, catalytic domain DQQ11_RS00090 PF00483 Nucleotidyl transferase DQQ11_RS00095 PF00483 Nucleotidyl transferase DQQ11_RS00100 PF00534 Glycosyl transferases group 1 DQQ11_RS00100 PF08323 Starch synthase catalytic domain DQQ11_RS00105 PF00343 Carbohydrate phosphorylase DQQ11_RS00110 PF02903 Alpha amylase, N-terminal ig-like domain DQQ11_RS00110 PF00128 Alpha amylase, catalytic domain DQQ11_RS00120 PF13419 Haloacid dehalogenase-like hydrolase DQQ11_RS00125 PF03632 Glycosyl hydrolase family 65 central catalytic domain DQQ11_RS00125 PF03633 Glycosyl hydrolase family 65, C-terminal domain DQQ11_RS00125 PF03636 Glycosyl hydrolase family 65, N-terminal domain DQQ11_RS00135 PF00313 'Cold-shock' DNA-binding domain DQQ11_RS00150 PF00072 Response regulator receiver domain DQQ11_RS00150 PF00486 Transcriptional regulatory protein, C terminal DQQ11_RS00155 PF14827 Double sensory domain of two-component sensor kinase DQQ11_RS00155 PF00672 HAMP domain DQQ11_RS00155 PF00512 His Kinase A (phospho-acceptor) domain DQQ11_RS00155 PF13426 PAS domain DQQ11_RS00155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQQ11_RS00165 PF09648 YycH protein DQQ11_RS00170 PF00753 Metallo-beta-lactamase superfamily DQQ11_RS00175 PF13180 PDZ domain DQQ11_RS00180 PF02590 Predicted SPOUT methyltransferase DQQ11_RS00195 PF13936 Helix-turn-helix domain DQQ11_RS00210 PF03167 Uracil DNA glycosylase superfamily DQQ11_RS00230 PF03358 NADPH-dependent FMN reductase DQQ11_RS00230 PF04205 FMN-binding domain DQQ11_RS00230 PF00890 FAD binding domain DQQ11_RS00235 PF00939 Sodium:sulfate symporter transmembrane region DQQ11_RS00250 PF01451 Low molecular weight phosphotyrosine protein phosphatase DQQ11_RS00265 PF00881 Nitroreductase family DQQ11_RS00270 PF07905 Purine catabolism regulatory protein-like family DQQ11_RS00270 PF17853 GGDEF-like domain DQQ11_RS00270 PF13556 PucR C-terminal helix-turn-helix domain DQQ11_RS00280 PF13419 Haloacid dehalogenase-like hydrolase DQQ11_RS00285 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DQQ11_RS00295 PF13350 Tyrosine phosphatase family DQQ11_RS00300 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal DQQ11_RS00300 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal DQQ11_RS00320 PF02525 Flavodoxin-like fold DQQ11_RS00325 PF00009 Elongation factor Tu GTP binding domain DQQ11_RS00325 PF14492 Elongation Factor G, domain II DQQ11_RS00325 PF00679 Elongation factor G C-terminus DQQ11_RS00325 PF03764 Elongation factor G, domain IV DQQ11_RS00355 PF00107 Zinc-binding dehydrogenase DQQ11_RS00355 PF08240 Alcohol dehydrogenase GroES-like domain DQQ11_RS00380 PF00561 alpha/beta hydrolase fold DQQ11_RS00385 PF03883 Peroxide stress protein YaaA DQQ11_RS00395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DQQ11_RS00420 PF00005 ABC transporter DQQ11_RS00425 PF02361 Cobalt transport protein DQQ11_RS00430 PF13190 PDGLE domain DQQ11_RS00430 PF01891 Cobalt uptake substrate-specific transmembrane region DQQ11_RS00435 PF13545 Crp-like helix-turn-helix domain DQQ11_RS00440 PF09861 Lactate racemase N-terminal domain DQQ11_RS00445 PF00731 AIR carboxylase DQQ11_RS00450 PF01969 Protein of unknown function DUF111 DQQ11_RS00455 PF01969 Protein of unknown function DUF111 DQQ11_RS00460 PF00230 Major intrinsic protein DQQ11_RS00465 PF02540 NAD synthase DQQ11_RS00470 PF08240 Alcohol dehydrogenase GroES-like domain DQQ11_RS00470 PF00107 Zinc-binding dehydrogenase DQQ11_RS00475 PF02110 Hydroxyethylthiazole kinase family DQQ11_RS00480 PF08543 Phosphomethylpyrimidine kinase DQQ11_RS00485 PF02581 Thiamine monophosphate synthase DQQ11_RS00495 PF07722 Peptidase C26 DQQ11_RS00505 PF00293 NUDIX domain DQQ11_RS00505 PF13344 Haloacid dehalogenase-like hydrolase DQQ11_RS00510 PF00324 Amino acid permease DQQ11_RS00520 PF00561 alpha/beta hydrolase fold DQQ11_RS00525 PF00689 Cation transporting ATPase, C-terminus DQQ11_RS00525 PF00690 Cation transporter/ATPase, N-terminus DQQ11_RS00530 PF01048 Phosphorylase superfamily DQQ11_RS00535 PF04024 PspC domain DQQ11_RS00550 PF00011 Hsp20/alpha crystallin family DQQ11_RS00565 PF07690 Major Facilitator Superfamily DQQ11_RS00565 PF00083 Sugar (and other) transporter DQQ11_RS00575 PF07690 Major Facilitator Superfamily DQQ11_RS00580 PF00248 Aldo/keto reductase family DQQ11_RS00585 PF00248 Aldo/keto reductase family DQQ11_RS00595 PF06100 MCRA family DQQ11_RS00610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DQQ11_RS00615 PF02361 Cobalt transport protein DQQ11_RS00620 PF12558 ATP-binding cassette cobalt transporter DQQ11_RS00620 PF00005 ABC transporter DQQ11_RS00625 PF07155 ECF-type riboflavin transporter, S component DQQ11_RS00635 PF00392 Bacterial regulatory proteins, gntR family DQQ11_RS00635 PF07702 UTRA domain DQQ11_RS00660 PF00106 short chain dehydrogenase DQQ11_RS00665 PF00005 ABC transporter DQQ11_RS00665 PF13732 Domain of unknown function (DUF4162) DQQ11_RS00680 PF01012 Electron transfer flavoprotein domain DQQ11_RS00680 PF00766 Electron transfer flavoprotein FAD-binding domain DQQ11_RS00685 PF12822 ECF transporter, substrate-specific component DQQ11_RS00690 PF00440 Bacterial regulatory proteins, tetR family DQQ11_RS00690 PF14278 Transcriptional regulator C-terminal region DQQ11_RS00695 PF02733 Dak1 domain DQQ11_RS00700 PF02733 Dak1 domain DQQ11_RS00705 PF02734 DAK2 domain DQQ11_RS00710 PF03610 PTS system fructose IIA component DQQ11_RS00715 PF00230 Major intrinsic protein DQQ11_RS00720 PF00356 Bacterial regulatory proteins, lacI family DQQ11_RS00725 PF00356 Bacterial regulatory proteins, lacI family DQQ11_RS00730 PF00128 Alpha amylase, catalytic domain DQQ11_RS00735 PF13416 Bacterial extracellular solute-binding protein DQQ11_RS00740 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS00745 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS00755 PF11896 Domain of unknown function (DUF3416) DQQ11_RS00755 PF00128 Alpha amylase, catalytic domain DQQ11_RS00760 PF00005 ABC transporter DQQ11_RS00760 PF17912 MalK OB fold domain DQQ11_RS00760 PF03459 TOBE domain DQQ11_RS00765 PF03633 Glycosyl hydrolase family 65, C-terminal domain DQQ11_RS00765 PF03636 Glycosyl hydrolase family 65, N-terminal domain DQQ11_RS00765 PF03632 Glycosyl hydrolase family 65 central catalytic domain DQQ11_RS00780 PF00480 ROK family DQQ11_RS00785 PF00367 phosphotransferase system, EIIB DQQ11_RS00785 PF02378 Phosphotransferase system, EIIC DQQ11_RS00785 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQQ11_RS00790 PF08244 Glycosyl hydrolases family 32 C terminal DQQ11_RS00790 PF00251 Glycosyl hydrolases family 32 N-terminal domain DQQ11_RS00795 PF00356 Bacterial regulatory proteins, lacI family DQQ11_RS00800 PF00128 Alpha amylase, catalytic domain DQQ11_RS00810 PF03553 Na+/H+ antiporter family DQQ11_RS00815 PF00128 Alpha amylase, catalytic domain DQQ11_RS00820 PF03466 LysR substrate binding domain DQQ11_RS00820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQQ11_RS00835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DQQ11_RS00840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DQQ11_RS00850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQQ11_RS00850 PF01842 ACT domain DQQ11_RS00850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DQQ11_RS00855 PF00266 Aminotransferase class-V DQQ11_RS00860 PF00300 Histidine phosphatase superfamily (branch 1) DQQ11_RS00865 PF00248 Aldo/keto reductase family DQQ11_RS00880 PF05670 NFACT protein RNA binding domain DQQ11_RS00885 PF00871 Acetokinase family DQQ11_RS00895 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DQQ11_RS00900 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DQQ11_RS00905 PF00005 ABC transporter DQQ11_RS00905 PF12848 ABC transporter DQQ11_RS00915 PF00005 ABC transporter DQQ11_RS00925 PF00255 Glutathione peroxidase DQQ11_RS00930 PF00248 Aldo/keto reductase family DQQ11_RS00935 PF03449 Transcription elongation factor, N-terminal DQQ11_RS00935 PF01272 Transcription elongation factor, GreA/GreB, C-term DQQ11_RS00950 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DQQ11_RS00955 PF03577 Peptidase family C69 DQQ11_RS00960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQQ11_RS00960 PF02378 Phosphotransferase system, EIIC DQQ11_RS00970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DQQ11_RS00975 PF08125 Mannitol dehydrogenase C-terminal domain DQQ11_RS00975 PF01232 Mannitol dehydrogenase Rossmann domain DQQ11_RS00985 PF00085 Thioredoxin DQQ11_RS01005 PF00334 Nucleoside diphosphate kinase DQQ11_RS01015 PF03358 NADPH-dependent FMN reductase DQQ11_RS01020 PF07702 UTRA domain DQQ11_RS01020 PF00392 Bacterial regulatory proteins, gntR family DQQ11_RS01025 PF02378 Phosphotransferase system, EIIC DQQ11_RS01040 PF01979 Amidohydrolase family DQQ11_RS01045 PF03841 L-seryl-tRNA selenium transferase DQQ11_RS01060 PF00132 Bacterial transferase hexapeptide (six repeats) DQQ11_RS01065 PF01053 Cys/Met metabolism PLP-dependent enzyme DQQ11_RS01070 PF00291 Pyridoxal-phosphate dependent enzyme DQQ11_RS01075 PF00557 Metallopeptidase family M24 DQQ11_RS01100 PF00392 Bacterial regulatory proteins, gntR family DQQ11_RS01100 PF07702 UTRA domain DQQ11_RS01105 PF16657 Maltogenic Amylase, C-terminal domain DQQ11_RS01105 PF00128 Alpha amylase, catalytic domain DQQ11_RS01110 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQQ11_RS01110 PF02378 Phosphotransferase system, EIIC DQQ11_RS01110 PF00367 phosphotransferase system, EIIB DQQ11_RS01115 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQQ11_RS01115 PF02378 Phosphotransferase system, EIIC DQQ11_RS01115 PF00367 phosphotransferase system, EIIB DQQ11_RS01125 PF02441 Flavoprotein DQQ11_RS01135 PF02082 Transcriptional regulator DQQ11_RS01140 PF00440 Bacterial regulatory proteins, tetR family DQQ11_RS01145 PF01566 Natural resistance-associated macrophage protein DQQ11_RS01165 PF07690 Major Facilitator Superfamily DQQ11_RS01175 PF00512 His Kinase A (phospho-acceptor) domain DQQ11_RS01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQQ11_RS01175 PF18719 ArlS sensor domain DQQ11_RS01180 PF00072 Response regulator receiver domain DQQ11_RS01180 PF00486 Transcriptional regulatory protein, C terminal DQQ11_RS01190 PF01418 Helix-turn-helix domain, rpiR family DQQ11_RS01190 PF01380 SIS domain DQQ11_RS01195 PF02378 Phosphotransferase system, EIIC DQQ11_RS01210 PF03816 Cell envelope-related transcriptional attenuator domain DQQ11_RS01215 PF02913 FAD linked oxidases, C-terminal domain DQQ11_RS01215 PF01565 FAD binding domain DQQ11_RS01225 PF04607 Region found in RelA / SpoT proteins DQQ11_RS01235 PF03176 MMPL family DQQ11_RS01240 PF03352 Methyladenine glycosylase DQQ11_RS01250 PF02687 FtsX-like permease family DQQ11_RS01250 PF12704 MacB-like periplasmic core domain DQQ11_RS01255 PF00005 ABC transporter DQQ11_RS01270 PF06737 Transglycosylase-like domain DQQ11_RS01275 PF01476 LysM domain DQQ11_RS01275 PF05257 CHAP domain DQQ11_RS01305 PF00871 Acetokinase family DQQ11_RS01315 PF01047 MarR family DQQ11_RS01320 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQQ11_RS01345 PF13416 Bacterial extracellular solute-binding protein DQQ11_RS01360 PF00005 ABC transporter DQQ11_RS01360 PF08402 TOBE domain DQQ11_RS01390 PF00392 Bacterial regulatory proteins, gntR family DQQ11_RS01395 PF00005 ABC transporter DQQ11_RS01405 PF00465 Iron-containing alcohol dehydrogenase DQQ11_RS01405 PF00171 Aldehyde dehydrogenase family DQQ11_RS01410 PF01116 Fructose-bisphosphate aldolase class-II DQQ11_RS01435 PF03577 Peptidase family C69 DQQ11_RS01445 PF02632 BioY family DQQ11_RS01460 PF00155 Aminotransferase class I and II DQQ11_RS01470 PF01061 ABC-2 type transporter DQQ11_RS01475 PF00005 ABC transporter DQQ11_RS01490 PF07690 Major Facilitator Superfamily DQQ11_RS01495 PF00909 Ammonium Transporter Family DQQ11_RS01500 PF00056 lactate/malate dehydrogenase, NAD binding domain DQQ11_RS01500 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DQQ11_RS01515 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DQQ11_RS01520 PF07732 Multicopper oxidase DQQ11_RS01520 PF07731 Multicopper oxidase DQQ11_RS01525 PF06993 Protein of unknown function (DUF1304) DQQ11_RS01530 PF01161 Phosphatidylethanolamine-binding protein DQQ11_RS01555 PF01156 Inosine-uridine preferring nucleoside hydrolase DQQ11_RS01560 PF00106 short chain dehydrogenase DQQ11_RS01575 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS01580 PF00005 ABC transporter DQQ11_RS01585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DQQ11_RS01585 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQQ11_RS01590 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DQQ11_RS01590 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DQQ11_RS01595 PF01266 FAD dependent oxidoreductase DQQ11_RS01595 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DQQ11_RS01600 PF00230 Major intrinsic protein DQQ11_RS01670 PF12464 Maltose acetyltransferase DQQ11_RS01670 PF00132 Bacterial transferase hexapeptide (six repeats) DQQ11_RS01685 PF02311 AraC-like ligand binding domain DQQ11_RS01685 PF12833 Helix-turn-helix domain DQQ11_RS01695 PF05525 Branched-chain amino acid transport protein DQQ11_RS01700 PF00999 Sodium/hydrogen exchanger family DQQ11_RS01740 PF00535 Glycosyl transferase family 2 DQQ11_RS01765 PF04397 LytTr DNA-binding domain DQQ11_RS01765 PF00072 Response regulator receiver domain DQQ11_RS01770 PF00072 Response regulator receiver domain DQQ11_RS01770 PF04397 LytTr DNA-binding domain DQQ11_RS01790 PF00664 ABC transporter transmembrane region DQQ11_RS01790 PF03412 Peptidase C39 family DQQ11_RS01790 PF00005 ABC transporter DQQ11_RS01825 PF13538 UvrD-like helicase C-terminal domain DQQ11_RS01830 PF00795 Carbon-nitrogen hydrolase DQQ11_RS01835 PF00579 tRNA synthetases class I (W and Y) DQQ11_RS01840 PF00392 Bacterial regulatory proteins, gntR family DQQ11_RS01840 PF07702 UTRA domain DQQ11_RS01845 PF02378 Phosphotransferase system, EIIC DQQ11_RS01860 PF02378 Phosphotransferase system, EIIC DQQ11_RS01865 PF00232 Glycosyl hydrolase family 1 DQQ11_RS01870 PF00480 ROK family DQQ11_RS01875 PF01418 Helix-turn-helix domain, rpiR family DQQ11_RS01875 PF01380 SIS domain DQQ11_RS01880 PF01207 Dihydrouridine synthase (Dus) DQQ11_RS01895 PF02541 Ppx/GppA phosphatase family DQQ11_RS01900 PF00368 Hydroxymethylglutaryl-coenzyme A reductase DQQ11_RS01910 PF02146 Sir2 family DQQ11_RS01915 PF01904 Protein of unknown function DUF72 DQQ11_RS01925 PF08264 Anticodon-binding domain of tRNA DQQ11_RS01925 PF09334 tRNA synthetases class I (M) DQQ11_RS01925 PF01588 Putative tRNA binding domain DQQ11_RS01930 PF07690 Major Facilitator Superfamily DQQ11_RS01935 PF01026 TatD related DNase DQQ11_RS01940 PF13331 Domain of unknown function (DUF4093) DQQ11_RS01945 PF00398 Ribosomal RNA adenine dimethylase DQQ11_RS01950 PF06257 Biofilm formation stimulator VEG DQQ11_RS01955 PF08544 GHMP kinases C terminal DQQ11_RS01955 PF00288 GHMP kinases N terminal domain DQQ11_RS01965 PF12146 Serine aminopeptidase, S33 DQQ11_RS01970 PF00005 ABC transporter DQQ11_RS01975 PF00950 ABC 3 transport family DQQ11_RS01995 PF09182 Bacterial purine repressor, N-terminal DQQ11_RS01995 PF00156 Phosphoribosyl transferase domain DQQ11_RS02000 PF00483 Nucleotidyl transferase DQQ11_RS02000 PF00132 Bacterial transferase hexapeptide (six repeats) DQQ11_RS02010 PF14572 Phosphoribosyl synthetase-associated domain DQQ11_RS02010 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DQQ11_RS02030 PF01966 HD domain DQQ11_RS02035 PF03099 Biotin/lipoate A/B protein ligase family DQQ11_RS02045 PF05066 HB1, ASXL, restriction endonuclease HTH domain DQQ11_RS02050 PF00117 Glutamine amidotransferase class-I DQQ11_RS02050 PF06418 CTP synthase N-terminus DQQ11_RS02055 PF02403 Seryl-tRNA synthetase N-terminal domain DQQ11_RS02055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DQQ11_RS02070 PF03315 Serine dehydratase beta chain DQQ11_RS02070 PF01842 ACT domain DQQ11_RS02075 PF03313 Serine dehydratase alpha chain DQQ11_RS02090 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DQQ11_RS02095 PF07497 Rho termination factor, RNA-binding domain DQQ11_RS02095 PF07498 Rho termination factor, N-terminal domain DQQ11_RS02095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DQQ11_RS02100 PF01197 Ribosomal protein L31 DQQ11_RS02110 PF04203 Sortase domain DQQ11_RS02115 PF04011 LemA family DQQ11_RS02120 PF01435 Peptidase family M48 DQQ11_RS02130 PF01225 Mur ligase family, catalytic domain DQQ11_RS02130 PF08245 Mur ligase middle domain DQQ11_RS02130 PF02875 Mur ligase family, glutamate ligase domain DQQ11_RS02135 PF00270 DEAD/DEAH box helicase DQQ11_RS02135 PF00271 Helicase conserved C-terminal domain DQQ11_RS02150 PF01648 4'-phosphopantetheinyl transferase superfamily DQQ11_RS02155 PF00842 Alanine racemase, C-terminal domain DQQ11_RS02155 PF01168 Alanine racemase, N-terminal domain DQQ11_RS02160 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DQQ11_RS02165 PF02705 K+ potassium transporter DQQ11_RS02180 PF00005 ABC transporter DQQ11_RS02185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DQQ11_RS02185 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DQQ11_RS02190 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DQQ11_RS02190 PF00117 Glutamine amidotransferase class-I DQQ11_RS02195 PF02774 Semialdehyde dehydrogenase, dimerisation domain DQQ11_RS02195 PF01118 Semialdehyde dehydrogenase, NAD binding domain DQQ11_RS02200 PF01960 ArgJ family DQQ11_RS02205 PF00696 Amino acid kinase family DQQ11_RS02210 PF00202 Aminotransferase class-III DQQ11_RS02215 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DQQ11_RS02215 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DQQ11_RS02225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DQQ11_RS02230 PF00561 alpha/beta hydrolase fold DQQ11_RS02250 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DQQ11_RS02250 PF00056 lactate/malate dehydrogenase, NAD binding domain DQQ11_RS02255 PF01195 Peptidyl-tRNA hydrolase DQQ11_RS02260 PF17757 UvrB interaction domain DQQ11_RS02260 PF00271 Helicase conserved C-terminal domain DQQ11_RS02260 PF00270 DEAD/DEAH box helicase DQQ11_RS02260 PF02559 CarD-like/TRCF domain DQQ11_RS02260 PF03461 TRCF domain DQQ11_RS02265 PF14667 Polysaccharide biosynthesis C-terminal domain DQQ11_RS02265 PF01943 Polysaccharide biosynthesis protein DQQ11_RS02270 PF01479 S4 domain DQQ11_RS02280 PF00575 S1 RNA binding domain DQQ11_RS02285 PF01171 PP-loop family DQQ11_RS02285 PF11734 TilS substrate C-terminal domain DQQ11_RS02290 PF01171 PP-loop family DQQ11_RS02290 PF11734 TilS substrate C-terminal domain DQQ11_RS02290 PF00156 Phosphoribosyl transferase domain DQQ11_RS02295 PF06480 FtsH Extracellular DQQ11_RS02295 PF01434 Peptidase family M41 DQQ11_RS02295 PF17862 AAA+ lid domain DQQ11_RS02295 PF00004 ATPase family associated with various cellular activities (AAA) DQQ11_RS02300 PF01430 Hsp33 protein DQQ11_RS02305 PF01207 Dihydrouridine synthase (Dus) DQQ11_RS02310 PF01336 OB-fold nucleic acid binding domain DQQ11_RS02310 PF00152 tRNA synthetases class II (D, K and N) DQQ11_RS02350 PF00854 POT family DQQ11_RS02395 PF04973 Nicotinamide mononucleotide transporter DQQ11_RS02400 PF03807 NADP oxidoreductase coenzyme F420-dependent DQQ11_RS02400 PF14748 Pyrroline-5-carboxylate reductase dimerisation DQQ11_RS02405 PF01979 Amidohydrolase family DQQ11_RS02405 PF13382 Adenine deaminase C-terminal domain DQQ11_RS02410 PF07702 UTRA domain DQQ11_RS02410 PF00392 Bacterial regulatory proteins, gntR family DQQ11_RS02415 PF03808 Glycosyl transferase WecB/TagA/CpsF family DQQ11_RS02420 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DQQ11_RS02420 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DQQ11_RS02420 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DQQ11_RS02425 PF02540 NAD synthase DQQ11_RS02430 PF00689 Cation transporting ATPase, C-terminus DQQ11_RS02430 PF00690 Cation transporter/ATPase, N-terminus DQQ11_RS02440 PF09371 Tex-like protein N-terminal domain DQQ11_RS02440 PF17674 HHH domain DQQ11_RS02440 PF00575 S1 RNA binding domain DQQ11_RS02440 PF16921 Tex protein YqgF-like domain DQQ11_RS02445 PF10263 SprT-like family DQQ11_RS02450 PF03447 Homoserine dehydrogenase, NAD binding domain DQQ11_RS02450 PF00742 Homoserine dehydrogenase DQQ11_RS02450 PF01842 ACT domain DQQ11_RS02455 PF08544 GHMP kinases C terminal DQQ11_RS02455 PF00288 GHMP kinases N terminal domain DQQ11_RS02475 PF08924 Domain of unknown function (DUF1906) DQQ11_RS02475 PF01471 Putative peptidoglycan binding domain DQQ11_RS02495 PF03610 PTS system fructose IIA component DQQ11_RS02495 PF03830 PTS system sorbose subfamily IIB component DQQ11_RS02500 PF03609 PTS system sorbose-specific iic component DQQ11_RS02505 PF03613 PTS system mannose/fructose/sorbose family IID component DQQ11_RS02515 PF00158 Sigma-54 interaction domain DQQ11_RS02515 PF00874 PRD domain DQQ11_RS02515 PF03610 PTS system fructose IIA component DQQ11_RS02520 PF03830 PTS system sorbose subfamily IIB component DQQ11_RS02520 PF03610 PTS system fructose IIA component DQQ11_RS02525 PF03830 PTS system sorbose subfamily IIB component DQQ11_RS02525 PF03610 PTS system fructose IIA component DQQ11_RS02530 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DQQ11_RS02530 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DQQ11_RS02540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DQQ11_RS02540 PF00289 Biotin carboxylase, N-terminal domain DQQ11_RS02540 PF02785 Biotin carboxylase C-terminal domain DQQ11_RS02545 PF01039 Carboxyl transferase domain DQQ11_RS02550 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DQQ11_RS02555 PF03816 Cell envelope-related transcriptional attenuator domain DQQ11_RS02565 PF00892 EamA-like transporter family DQQ11_RS02570 PF00300 Histidine phosphatase superfamily (branch 1) DQQ11_RS02580 PF03051 Peptidase C1-like family DQQ11_RS02585 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DQQ11_RS02595 PF00692 dUTPase DQQ11_RS02615 PF18073 Rubredoxin metal binding domain DQQ11_RS02625 PF00749 tRNA synthetases class I (E and Q), catalytic domain DQQ11_RS02630 PF01406 tRNA synthetases class I (C) catalytic domain DQQ11_RS02630 PF09190 DALR domain DQQ11_RS02635 PF00636 Ribonuclease III domain DQQ11_RS02640 PF08032 RNA 2'-O ribose methyltransferase substrate binding DQQ11_RS02640 PF00588 SpoU rRNA Methylase family DQQ11_RS02655 PF00471 Ribosomal protein L33 DQQ11_RS02665 PF00467 KOW motif DQQ11_RS02665 PF02357 Transcription termination factor nusG DQQ11_RS02675 PF03946 Ribosomal protein L11, N-terminal domain DQQ11_RS02675 PF00298 Ribosomal protein L11, RNA binding domain DQQ11_RS02680 PF00687 Ribosomal protein L1p/L10e family DQQ11_RS02685 PF00466 Ribosomal protein L10 DQQ11_RS02690 PF00542 Ribosomal protein L7/L12 C-terminal domain DQQ11_RS02690 PF16320 Ribosomal protein L7/L12 dimerisation domain DQQ11_RS02705 PF09924 Uncharacterised conserved protein (DUF2156) DQQ11_RS02705 PF03706 Lysylphosphatidylglycerol synthase TM region DQQ11_RS02710 PF03641 Possible lysine decarboxylase DQQ11_RS02715 PF00268 Ribonucleotide reductase, small chain DQQ11_RS02720 PF08343 Ribonucleotide reductase N-terminal DQQ11_RS02720 PF00317 Ribonucleotide reductase, all-alpha domain DQQ11_RS02720 PF02867 Ribonucleotide reductase, barrel domain DQQ11_RS02725 PF00462 Glutaredoxin DQQ11_RS02730 PF05175 Methyltransferase small domain DQQ11_RS02735 PF14437 MafB19-like deaminase DQQ11_RS02745 PF12169 DNA polymerase III subunits gamma and tau domain III DQQ11_RS02750 PF02575 YbaB/EbfC DNA-binding family DQQ11_RS02755 PF13662 Toprim domain DQQ11_RS02755 PF02132 RecR protein DQQ11_RS02765 PF02223 Thymidylate kinase DQQ11_RS02770 PF06153 Cyclic-di-AMP receptor DQQ11_RS02775 PF09115 DNA polymerase III, delta subunit, C terminal DQQ11_RS02780 PF06156 Initiation control protein YabA DQQ11_RS02785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DQQ11_RS02795 PF16363 GDP-mannose 4,6 dehydratase DQQ11_RS02800 PF00266 Aminotransferase class-V DQQ11_RS02805 PF13419 Haloacid dehalogenase-like hydrolase DQQ11_RS02810 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS02815 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS02820 PF00005 ABC transporter DQQ11_RS02830 PF00814 Glycoprotease family DQQ11_RS02835 PF00583 Acetyltransferase (GNAT) family DQQ11_RS02840 PF00583 Acetyltransferase (GNAT) family DQQ11_RS02845 PF00814 Glycoprotease family DQQ11_RS02855 PF16326 ABC transporter C-terminal domain DQQ11_RS02855 PF00005 ABC transporter DQQ11_RS02855 PF12848 ABC transporter DQQ11_RS02860 PF06971 Putative DNA-binding protein N-terminus DQQ11_RS02860 PF02629 CoA binding domain DQQ11_RS02865 PF02517 CPBP intramembrane metalloprotease DQQ11_RS02870 PF00166 Chaperonin 10 Kd subunit DQQ11_RS02875 PF00118 TCP-1/cpn60 chaperonin family DQQ11_RS02880 PF13520 Amino acid permease DQQ11_RS02885 PF00953 Glycosyl transferase family 4 DQQ11_RS02890 PF12849 PBP superfamily domain DQQ11_RS02895 PF09186 Domain of unknown function (DUF1949) DQQ11_RS02895 PF01205 Uncharacterized protein family UPF0029 DQQ11_RS02900 PF04851 Type III restriction enzyme, res subunit DQQ11_RS02900 PF00271 Helicase conserved C-terminal domain DQQ11_RS02910 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DQQ11_RS02910 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DQQ11_RS02915 PF01043 SecA preprotein cross-linking domain DQQ11_RS02915 PF07517 SecA DEAD-like domain DQQ11_RS02915 PF07516 SecA Wing and Scaffold domain DQQ11_RS02925 PF17820 PDZ domain DQQ11_RS02930 PF00072 Response regulator receiver domain DQQ11_RS02930 PF00486 Transcriptional regulatory protein, C terminal DQQ11_RS02935 PF00512 His Kinase A (phospho-acceptor) domain DQQ11_RS02935 PF00989 PAS fold DQQ11_RS02935 PF16736 Single Cache-like DQQ11_RS02935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQQ11_RS02940 PF12849 PBP superfamily domain DQQ11_RS02945 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS02950 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS02955 PF00005 ABC transporter DQQ11_RS02960 PF00005 ABC transporter DQQ11_RS02965 PF01895 PhoU domain DQQ11_RS02970 PF04024 PspC domain DQQ11_RS02975 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DQQ11_RS02980 PF02603 HPr Serine kinase N terminus DQQ11_RS02980 PF07475 HPr Serine kinase C-terminal domain DQQ11_RS02985 PF01790 Prolipoprotein diacylglyceryl transferase DQQ11_RS02990 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DQQ11_RS02990 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DQQ11_RS02995 PF00483 Nucleotidyl transferase DQQ11_RS03005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DQQ11_RS03005 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQQ11_RS03040 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQQ11_RS03045 PF04239 Protein of unknown function (DUF421) DQQ11_RS03055 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DQQ11_RS03055 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DQQ11_RS03055 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DQQ11_RS03055 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DQQ11_RS03065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DQQ11_RS03065 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQQ11_RS03075 PF07690 Major Facilitator Superfamily DQQ11_RS03085 PF00271 Helicase conserved C-terminal domain DQQ11_RS03085 PF02151 UvrB/uvrC motif DQQ11_RS03085 PF12344 Ultra-violet resistance protein B DQQ11_RS03085 PF04851 Type III restriction enzyme, res subunit DQQ11_RS03085 PF17757 UvrB interaction domain DQQ11_RS03090 PF00005 ABC transporter DQQ11_RS03090 PF17760 UvrA interaction domain DQQ11_RS03090 PF17755 UvrA DNA-binding domain DQQ11_RS03095 PF02664 S-Ribosylhomocysteinase (LuxS) DQQ11_RS03100 PF00764 Arginosuccinate synthase DQQ11_RS03105 PF00206 Lyase DQQ11_RS03105 PF14698 Argininosuccinate lyase C-terminal DQQ11_RS03115 PF03668 P-loop ATPase protein family DQQ11_RS03120 PF01933 Uncharacterised protein family UPF0052 DQQ11_RS03125 PF14527 WhiA LAGLIDADG-like domain DQQ11_RS03125 PF10298 WhiA N-terminal LAGLIDADG-like domain DQQ11_RS03125 PF02650 WhiA C-terminal HTH domain DQQ11_RS03130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DQQ11_RS03135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DQQ11_RS03135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQQ11_RS03140 PF00574 Clp protease DQQ11_RS03150 PF00309 Sigma-54 factor, Activator interacting domain (AID) DQQ11_RS03150 PF04552 Sigma-54, DNA binding domain DQQ11_RS03150 PF04963 Sigma-54 factor, core binding domain DQQ11_RS03155 PF04198 Putative sugar-binding domain DQQ11_RS03160 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DQQ11_RS03160 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DQQ11_RS03165 PF00162 Phosphoglycerate kinase DQQ11_RS03170 PF00121 Triosephosphate isomerase DQQ11_RS03175 PF03952 Enolase, N-terminal domain DQQ11_RS03175 PF00113 Enolase, C-terminal TIM barrel domain DQQ11_RS03190 PF00654 Voltage gated chloride channel DQQ11_RS03195 PF03840 Preprotein translocase SecG subunit DQQ11_RS03200 PF12146 Serine aminopeptidase, S33 DQQ11_RS03205 PF00773 RNB domain DQQ11_RS03205 PF17876 Cold shock domain DQQ11_RS03205 PF08206 Ribonuclease B OB domain DQQ11_RS03205 PF00575 S1 RNA binding domain DQQ11_RS03210 PF01668 SmpB protein DQQ11_RS03220 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS03225 PF00005 ABC transporter DQQ11_RS03240 PF03167 Uracil DNA glycosylase superfamily DQQ11_RS03245 PF01515 Phosphate acetyl/butaryl transferase DQQ11_RS03250 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DQQ11_RS03260 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DQQ11_RS03260 PF07733 Bacterial DNA polymerase III alpha NTPase domain DQQ11_RS03260 PF02811 PHP domain DQQ11_RS03260 PF11490 DNA polymerase III polC-type N-terminus II DQQ11_RS03260 PF00929 Exonuclease DQQ11_RS03260 PF14480 DNA polymerase III polC-type N-terminus I DQQ11_RS03260 PF14579 Helix-hairpin-helix motif DQQ11_RS03265 PF03372 Endonuclease/Exonuclease/phosphatase family DQQ11_RS03270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DQQ11_RS03275 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DQQ11_RS03275 PF01565 FAD binding domain DQQ11_RS03280 PF00999 Sodium/hydrogen exchanger family DQQ11_RS03295 PF02457 DisA bacterial checkpoint controller nucleotide-binding DQQ11_RS03305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DQQ11_RS03305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DQQ11_RS03305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DQQ11_RS03305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DQQ11_RS03310 PF01380 SIS domain DQQ11_RS03330 PF01263 Aldose 1-epimerase DQQ11_RS03350 PF00881 Nitroreductase family DQQ11_RS03365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DQQ11_RS03365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DQQ11_RS03380 PF03960 ArsC family DQQ11_RS03400 PF02541 Ppx/GppA phosphatase family DQQ11_RS03405 PF13090 Polyphosphate kinase C-terminal domain 2 DQQ11_RS03405 PF02503 Polyphosphate kinase middle domain DQQ11_RS03405 PF13089 Polyphosphate kinase N-terminal domain DQQ11_RS03405 PF17941 Polyphosphate kinase C-terminal domain 1 DQQ11_RS03415 PF04991 LicD family DQQ11_RS03430 PF00860 Permease family DQQ11_RS03435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DQQ11_RS03435 PF00205 Thiamine pyrophosphate enzyme, central domain DQQ11_RS03435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DQQ11_RS03445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DQQ11_RS03445 PF00205 Thiamine pyrophosphate enzyme, central domain DQQ11_RS03445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DQQ11_RS03450 PF00561 alpha/beta hydrolase fold DQQ11_RS03460 PF01757 Acyltransferase family DQQ11_RS03465 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DQQ11_RS03465 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DQQ11_RS03465 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal DQQ11_RS03480 PF13520 Amino acid permease DQQ11_RS03495 PF00293 NUDIX domain DQQ11_RS03495 PF03099 Biotin/lipoate A/B protein ligase family DQQ11_RS03505 PF00625 Guanylate kinase DQQ11_RS03510 PF01475 Ferric uptake regulator family DQQ11_RS03525 PF13419 Haloacid dehalogenase-like hydrolase DQQ11_RS03530 PF00155 Aminotransferase class I and II DQQ11_RS03535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DQQ11_RS03535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQQ11_RS03550 PF00005 ABC transporter DQQ11_RS03555 PF00497 Bacterial extracellular solute-binding proteins, family 3 DQQ11_RS03560 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS03565 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS03570 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQQ11_RS03570 PF02378 Phosphotransferase system, EIIC DQQ11_RS03570 PF00367 phosphotransferase system, EIIB DQQ11_RS03580 PF02378 Phosphotransferase system, EIIC DQQ11_RS03580 PF00367 phosphotransferase system, EIIB DQQ11_RS03585 PF04794 YdjC-like protein DQQ11_RS03590 PF13520 Amino acid permease DQQ11_RS03600 PF01047 MarR family DQQ11_RS03630 PF01926 50S ribosome-binding GTPase DQQ11_RS03630 PF13167 GTP-binding GTPase N-terminal DQQ11_RS03630 PF16360 GTP-binding GTPase Middle Region DQQ11_RS03635 PF00293 NUDIX domain DQQ11_RS03635 PF13344 Haloacid dehalogenase-like hydrolase DQQ11_RS03640 PF00893 Small Multidrug Resistance protein DQQ11_RS03650 PF00300 Histidine phosphatase superfamily (branch 1) DQQ11_RS03655 PF00300 Histidine phosphatase superfamily (branch 1) DQQ11_RS03660 PF02254 TrkA-N domain DQQ11_RS03660 PF02080 TrkA-C domain DQQ11_RS03660 PF00999 Sodium/hydrogen exchanger family DQQ11_RS03665 PF13673 Acetyltransferase (GNAT) domain DQQ11_RS03665 PF04229 GrpB protein DQQ11_RS03670 PF03123 CAT RNA binding domain DQQ11_RS03670 PF00874 PRD domain DQQ11_RS03675 PF00367 phosphotransferase system, EIIB DQQ11_RS03675 PF02378 Phosphotransferase system, EIIC DQQ11_RS03675 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQQ11_RS03680 PF00232 Glycosyl hydrolase family 1 DQQ11_RS03685 PF09335 SNARE associated Golgi protein DQQ11_RS03690 PF13538 UvrD-like helicase C-terminal domain DQQ11_RS03695 PF03060 Nitronate monooxygenase DQQ11_RS03700 PF00485 Phosphoribulokinase / Uridine kinase family DQQ11_RS03705 PF02540 NAD synthase DQQ11_RS03705 PF00958 GMP synthase C terminal domain DQQ11_RS03705 PF00117 Glutamine amidotransferase class-I DQQ11_RS03715 PF02899 Phage integrase, N-terminal SAM-like domain DQQ11_RS03715 PF00589 Phage integrase family DQQ11_RS03770 PF01381 Helix-turn-helix DQQ11_RS03780 PF02517 CPBP intramembrane metalloprotease DQQ11_RS03785 PF01638 HxlR-like helix-turn-helix DQQ11_RS03790 PF07690 Major Facilitator Superfamily DQQ11_RS03800 PF01381 Helix-turn-helix DQQ11_RS03835 PF01757 Acyltransferase family DQQ11_RS03840 PF04226 Transglycosylase associated protein DQQ11_RS03855 PF03780 Asp23 family, cell envelope-related function DQQ11_RS03865 PF01557 Fumarylacetoacetate (FAA) hydrolase family DQQ11_RS03885 PF11838 ERAP1-like C-terminal domain DQQ11_RS03885 PF01433 Peptidase family M1 domain DQQ11_RS03890 PF12008 Type I restriction and modification enzyme - subunit R C terminal DQQ11_RS03890 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DQQ11_RS03890 PF18766 SWI2/SNF2 ATPase DQQ11_RS03905 PF13936 Helix-turn-helix domain DQQ11_RS03935 PF06458 MucBP domain DQQ11_RS03945 PF00485 Phosphoribulokinase / Uridine kinase family DQQ11_RS03960 PF03466 LysR substrate binding domain DQQ11_RS03960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQQ11_RS03965 PF14537 Cytochrome c3 DQQ11_RS03965 PF00890 FAD binding domain DQQ11_RS03975 PF02525 Flavodoxin-like fold DQQ11_RS03980 PF00152 tRNA synthetases class II (D, K and N) DQQ11_RS03980 PF01336 OB-fold nucleic acid binding domain DQQ11_RS03985 PF03590 Aspartate-ammonia ligase DQQ11_RS03990 PF03577 Peptidase family C69 DQQ11_RS04010 PF00570 HRDC domain DQQ11_RS04010 PF16124 RecQ zinc-binding DQQ11_RS04010 PF00270 DEAD/DEAH box helicase DQQ11_RS04010 PF09382 RQC domain DQQ11_RS04010 PF00271 Helicase conserved C-terminal domain DQQ11_RS04015 PF00849 RNA pseudouridylate synthase DQQ11_RS04020 PF01022 Bacterial regulatory protein, arsR family DQQ11_RS04050 PF00300 Histidine phosphatase superfamily (branch 1) DQQ11_RS04050 PF00106 short chain dehydrogenase DQQ11_RS04060 PF07859 alpha/beta hydrolase fold DQQ11_RS04070 PF08245 Mur ligase middle domain DQQ11_RS04070 PF01225 Mur ligase family, catalytic domain DQQ11_RS04070 PF02875 Mur ligase family, glutamate ligase domain DQQ11_RS04075 PF13840 ACT domain DQQ11_RS04075 PF00696 Amino acid kinase family DQQ11_RS04080 PF00733 Asparagine synthase DQQ11_RS04080 PF13537 Glutamine amidotransferase domain DQQ11_RS04130 PF07690 Major Facilitator Superfamily DQQ11_RS04150 PF00313 'Cold-shock' DNA-binding domain DQQ11_RS04155 PF06738 Putative threonine/serine exporter DQQ11_RS04165 PF03816 Cell envelope-related transcriptional attenuator domain DQQ11_RS04185 PF02082 Transcriptional regulator DQQ11_RS04190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DQQ11_RS04190 PF00205 Thiamine pyrophosphate enzyme, central domain DQQ11_RS04190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DQQ11_RS04195 PF00324 Amino acid permease DQQ11_RS04205 PF01712 Deoxynucleoside kinase DQQ11_RS04210 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DQQ11_RS04210 PF02403 Seryl-tRNA synthetase N-terminal domain DQQ11_RS04250 PF17727 CtsR C-terminal dimerization domain DQQ11_RS04250 PF05848 CtsR N-terminal HTH domain DQQ11_RS04255 PF00004 ATPase family associated with various cellular activities (AAA) DQQ11_RS04255 PF07724 AAA domain (Cdc48 subfamily) DQQ11_RS04255 PF17871 AAA lid domain DQQ11_RS04255 PF10431 C-terminal, D2-small domain, of ClpB protein DQQ11_RS04255 PF02861 Clp amino terminal domain, pathogenicity island component DQQ11_RS04260 PF08360 QacR-like protein, C-terminal region DQQ11_RS04260 PF00440 Bacterial regulatory proteins, tetR family DQQ11_RS04265 PF04560 RNA polymerase Rpb2, domain 7 DQQ11_RS04265 PF04563 RNA polymerase beta subunit DQQ11_RS04265 PF04561 RNA polymerase Rpb2, domain 2 DQQ11_RS04265 PF10385 RNA polymerase beta subunit external 1 domain DQQ11_RS04265 PF00562 RNA polymerase Rpb2, domain 6 DQQ11_RS04265 PF04565 RNA polymerase Rpb2, domain 3 DQQ11_RS04270 PF04983 RNA polymerase Rpb1, domain 3 DQQ11_RS04270 PF04998 RNA polymerase Rpb1, domain 5 DQQ11_RS04270 PF00623 RNA polymerase Rpb1, domain 2 DQQ11_RS04270 PF04997 RNA polymerase Rpb1, domain 1 DQQ11_RS04270 PF05000 RNA polymerase Rpb1, domain 4 DQQ11_RS04275 PF06750 Bacterial Peptidase A24 N-terminal domain DQQ11_RS04275 PF01478 Type IV leader peptidase family DQQ11_RS04280 PF00164 Ribosomal protein S12/S23 DQQ11_RS04285 PF00177 Ribosomal protein S7p/S5e DQQ11_RS04290 PF00679 Elongation factor G C-terminus DQQ11_RS04290 PF14492 Elongation Factor G, domain II DQQ11_RS04290 PF03764 Elongation factor G, domain IV DQQ11_RS04290 PF00009 Elongation factor Tu GTP binding domain DQQ11_RS04290 PF03144 Elongation factor Tu domain 2 DQQ11_RS04295 PF00338 Ribosomal protein S10p/S20e DQQ11_RS04300 PF00297 Ribosomal protein L3 DQQ11_RS04305 PF00573 Ribosomal protein L4/L1 family DQQ11_RS04310 PF00276 Ribosomal protein L23 DQQ11_RS04315 PF03947 Ribosomal Proteins L2, C-terminal domain DQQ11_RS04315 PF00181 Ribosomal Proteins L2, RNA binding domain DQQ11_RS04320 PF00203 Ribosomal protein S19 DQQ11_RS04325 PF00237 Ribosomal protein L22p/L17e DQQ11_RS04330 PF00189 Ribosomal protein S3, C-terminal domain DQQ11_RS04330 PF07650 KH domain DQQ11_RS04335 PF00252 Ribosomal protein L16p/L10e DQQ11_RS04340 PF00831 Ribosomal L29 protein DQQ11_RS04345 PF00366 Ribosomal protein S17 DQQ11_RS04350 PF00238 Ribosomal protein L14p/L23e DQQ11_RS04355 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DQQ11_RS04355 PF00467 KOW motif DQQ11_RS04360 PF00281 Ribosomal protein L5 DQQ11_RS04360 PF00673 ribosomal L5P family C-terminus DQQ11_RS04365 PF00253 Ribosomal protein S14p/S29e DQQ11_RS04370 PF00410 Ribosomal protein S8 DQQ11_RS04375 PF00347 Ribosomal protein L6 DQQ11_RS04380 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DQQ11_RS04385 PF00333 Ribosomal protein S5, N-terminal domain DQQ11_RS04385 PF03719 Ribosomal protein S5, C-terminal domain DQQ11_RS04390 PF00327 Ribosomal protein L30p/L7e DQQ11_RS04395 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DQQ11_RS04400 PF00344 SecY translocase DQQ11_RS04405 PF05191 Adenylate kinase, active site lid DQQ11_RS04410 PF01176 Translation initiation factor 1A / IF-1 DQQ11_RS04415 PF00444 Ribosomal protein L36 DQQ11_RS04420 PF00416 Ribosomal protein S13/S18 DQQ11_RS04425 PF00411 Ribosomal protein S11 DQQ11_RS04430 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DQQ11_RS04430 PF01000 RNA polymerase Rpb3/RpoA insert domain DQQ11_RS04430 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DQQ11_RS04435 PF01196 Ribosomal protein L17 DQQ11_RS04440 PF00348 Polyprenyl synthetase DQQ11_RS04460 PF04205 FMN-binding domain DQQ11_RS04465 PF02424 ApbE family DQQ11_RS04470 PF00005 ABC transporter DQQ11_RS04475 PF00005 ABC transporter DQQ11_RS04480 PF02361 Cobalt transport protein DQQ11_RS04485 PF01416 tRNA pseudouridine synthase DQQ11_RS04490 PF00572 Ribosomal protein L13 DQQ11_RS04495 PF00380 Ribosomal protein S9/S16 DQQ11_RS04500 PF02645 Uncharacterised protein, DegV family COG1307 DQQ11_RS04515 PF02779 Transketolase, pyrimidine binding domain DQQ11_RS04515 PF02780 Transketolase, C-terminal domain DQQ11_RS04515 PF00456 Transketolase, thiamine diphosphate binding domain DQQ11_RS04520 PF08501 Shikimate dehydrogenase substrate binding domain DQQ11_RS04520 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DQQ11_RS04525 PF18152 DAHP synthase ferredoxin-like domain DQQ11_RS04525 PF00793 DAHP synthetase I family DQQ11_RS04530 PF01761 3-dehydroquinate synthase DQQ11_RS04535 PF00939 Sodium:sulfate symporter transmembrane region DQQ11_RS04540 PF01883 Iron-sulfur cluster assembly protein DQQ11_RS04545 PF05683 Fumarase C-terminus DQQ11_RS04550 PF05681 Fumarate hydratase (Fumerase) DQQ11_RS04555 PF12833 Helix-turn-helix domain DQQ11_RS04555 PF02311 AraC-like ligand binding domain DQQ11_RS04560 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DQQ11_RS04565 PF00005 ABC transporter DQQ11_RS04570 PF00950 ABC 3 transport family DQQ11_RS04575 PF01297 Zinc-uptake complex component A periplasmic DQQ11_RS04585 PF00056 lactate/malate dehydrogenase, NAD binding domain DQQ11_RS04585 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DQQ11_RS04590 PF00939 Sodium:sulfate symporter transmembrane region DQQ11_RS04600 PF03949 Malic enzyme, NAD binding domain DQQ11_RS04600 PF00390 Malic enzyme, N-terminal domain DQQ11_RS04605 PF08218 Citrate lyase ligase C-terminal domain DQQ11_RS04610 PF06857 Malonate decarboxylase delta subunit (MdcD) DQQ11_RS04615 PF03328 HpcH/HpaI aldolase/citrate lyase family DQQ11_RS04620 PF04223 Citrate lyase, alpha subunit (CitF) DQQ11_RS04630 PF00206 Lyase DQQ11_RS04630 PF10415 Fumarase C C-terminus DQQ11_RS04635 PF00890 FAD binding domain DQQ11_RS04635 PF14537 Cytochrome c3 DQQ11_RS04640 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase DQQ11_RS04640 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DQQ11_RS04645 PF03466 LysR substrate binding domain DQQ11_RS04645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQQ11_RS04655 PF03466 LysR substrate binding domain DQQ11_RS04655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQQ11_RS04660 PF00390 Malic enzyme, N-terminal domain DQQ11_RS04660 PF03949 Malic enzyme, NAD binding domain DQQ11_RS04670 PF13520 Amino acid permease DQQ11_RS04675 PF12822 ECF transporter, substrate-specific component DQQ11_RS04690 PF01654 Cytochrome bd terminal oxidase subunit I DQQ11_RS04695 PF02322 Cytochrome bd terminal oxidase subunit II DQQ11_RS04700 PF00005 ABC transporter DQQ11_RS04700 PF00664 ABC transporter transmembrane region DQQ11_RS04705 PF00664 ABC transporter transmembrane region DQQ11_RS04705 PF00005 ABC transporter DQQ11_RS04720 PF00348 Polyprenyl synthetase DQQ11_RS04730 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DQQ11_RS04730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DQQ11_RS04735 PF13457 GW (Gly-Tryp) dipeptide domain DQQ11_RS04735 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DQQ11_RS04745 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DQQ11_RS04750 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DQQ11_RS04750 PF02222 ATP-grasp domain DQQ11_RS04755 PF00580 UvrD/REP helicase N-terminal domain DQQ11_RS04755 PF13361 UvrD-like helicase C-terminal domain DQQ11_RS04760 PF01653 NAD-dependent DNA ligase adenylation domain DQQ11_RS04760 PF12826 Helix-hairpin-helix motif DQQ11_RS04760 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DQQ11_RS04760 PF03120 NAD-dependent DNA ligase OB-fold domain DQQ11_RS04760 PF00533 BRCA1 C Terminus (BRCT) domain DQQ11_RS04765 PF07537 CamS sex pheromone cAM373 precursor DQQ11_RS04770 PF02686 Glu-tRNAGln amidotransferase C subunit DQQ11_RS04775 PF01425 Amidase DQQ11_RS04780 PF02637 GatB domain DQQ11_RS04780 PF02934 GatB/GatE catalytic domain DQQ11_RS04785 PF00781 Diacylglycerol kinase catalytic domain DQQ11_RS04790 PF05958 tRNA (Uracil-5-)-methyltransferase DQQ11_RS04790 PF01938 TRAM domain DQQ11_RS04805 PF02378 Phosphotransferase system, EIIC DQQ11_RS04815 PF01418 Helix-turn-helix domain, rpiR family DQQ11_RS04815 PF01380 SIS domain DQQ11_RS04830 PF00313 'Cold-shock' DNA-binding domain DQQ11_RS04835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DQQ11_RS04835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DQQ11_RS04840 PF00271 Helicase conserved C-terminal domain DQQ11_RS04840 PF00270 DEAD/DEAH box helicase DQQ11_RS04855 PF02378 Phosphotransferase system, EIIC DQQ11_RS04880 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DQQ11_RS04880 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DQQ11_RS04890 PF02350 UDP-N-acetylglucosamine 2-epimerase DQQ11_RS04900 PF00230 Major intrinsic protein DQQ11_RS04905 PF03275 UDP-galactopyranose mutase DQQ11_RS04935 PF00534 Glycosyl transferases group 1 DQQ11_RS04935 PF13439 Glycosyltransferase Family 4 DQQ11_RS04940 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DQQ11_RS04950 PF14667 Polysaccharide biosynthesis C-terminal domain DQQ11_RS04950 PF01943 Polysaccharide biosynthesis protein DQQ11_RS04955 PF01467 Cytidylyltransferase-like DQQ11_RS04965 PF16363 GDP-mannose 4,6 dehydratase DQQ11_RS04970 PF00589 Phage integrase family DQQ11_RS04980 PF13614 AAA domain DQQ11_RS04990 PF16363 GDP-mannose 4,6 dehydratase DQQ11_RS04995 PF02397 Bacterial sugar transferase DQQ11_RS05005 PF00534 Glycosyl transferases group 1 DQQ11_RS05005 PF13439 Glycosyltransferase Family 4 DQQ11_RS05020 PF04230 Polysaccharide pyruvyl transferase DQQ11_RS05120 PF03275 UDP-galactopyranose mutase DQQ11_RS05155 PF12833 Helix-turn-helix domain DQQ11_RS05160 PF00746 LPXTG cell wall anchor motif DQQ11_RS05175 PF02397 Bacterial sugar transferase DQQ11_RS05210 PF02631 RecX family DQQ11_RS05215 PF04167 Protein of unknown function (DUF402) DQQ11_RS05220 PF01476 LysM domain DQQ11_RS05220 PF00877 NlpC/P60 family DQQ11_RS05220 PF08239 Bacterial SH3 domain DQQ11_RS05235 PF00144 Beta-lactamase DQQ11_RS05240 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DQQ11_RS05240 PF00056 lactate/malate dehydrogenase, NAD binding domain DQQ11_RS05245 PF01594 AI-2E family transporter DQQ11_RS05250 PF01467 Cytidylyltransferase-like DQQ11_RS05255 PF02447 GntP family permease DQQ11_RS05260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DQQ11_RS05260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DQQ11_RS05265 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DQQ11_RS05265 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DQQ11_RS05270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DQQ11_RS05270 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQQ11_RS05275 PF03144 Elongation factor Tu domain 2 DQQ11_RS05275 PF16658 Class II release factor RF3, C-terminal domain DQQ11_RS05275 PF00009 Elongation factor Tu GTP binding domain DQQ11_RS05290 PF03466 LysR substrate binding domain DQQ11_RS05290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQQ11_RS05305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DQQ11_RS05310 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS05315 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS05315 PF12911 N-terminal TM domain of oligopeptide transport permease C DQQ11_RS05320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DQQ11_RS05320 PF00005 ABC transporter DQQ11_RS05325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DQQ11_RS05325 PF00005 ABC transporter DQQ11_RS05335 PF00589 Phage integrase family DQQ11_RS05340 PF07724 AAA domain (Cdc48 subfamily) DQQ11_RS05340 PF00004 ATPase family associated with various cellular activities (AAA) DQQ11_RS05340 PF17871 AAA lid domain DQQ11_RS05340 PF10431 C-terminal, D2-small domain, of ClpB protein DQQ11_RS05350 PF00381 PTS HPr component phosphorylation site DQQ11_RS05355 PF00391 PEP-utilising enzyme, mobile domain DQQ11_RS05355 PF02896 PEP-utilising enzyme, TIM barrel domain DQQ11_RS05355 PF05524 PEP-utilising enzyme, N-terminal DQQ11_RS05360 PF13439 Glycosyltransferase Family 4 DQQ11_RS05360 PF00534 Glycosyl transferases group 1 DQQ11_RS05365 PF00534 Glycosyl transferases group 1 DQQ11_RS05365 PF13439 Glycosyltransferase Family 4 DQQ11_RS05375 PF07943 Penicillin-binding protein 5, C-terminal domain DQQ11_RS05375 PF00768 D-alanyl-D-alanine carboxypeptidase DQQ11_RS05380 PF00155 Aminotransferase class I and II DQQ11_RS05385 PF08796 Protein of unknown function (DUF1797) DQQ11_RS05390 PF00884 Sulfatase DQQ11_RS05480 PF00156 Phosphoribosyl transferase domain DQQ11_RS05500 PF00149 Calcineurin-like phosphoesterase DQQ11_RS05510 PF01566 Natural resistance-associated macrophage protein DQQ11_RS05515 PF00762 Ferrochelatase DQQ11_RS05520 PF00324 Amino acid permease DQQ11_RS05525 PF02574 Homocysteine S-methyltransferase DQQ11_RS05530 PF00534 Glycosyl transferases group 1 DQQ11_RS05530 PF00862 Sucrose synthase DQQ11_RS05540 PF02773 S-adenosylmethionine synthetase, C-terminal domain DQQ11_RS05540 PF02772 S-adenosylmethionine synthetase, central domain DQQ11_RS05540 PF00438 S-adenosylmethionine synthetase, N-terminal domain DQQ11_RS05545 PF07690 Major Facilitator Superfamily DQQ11_RS05560 PF00862 Sucrose synthase DQQ11_RS05560 PF00534 Glycosyl transferases group 1 DQQ11_RS05565 PF00534 Glycosyl transferases group 1 DQQ11_RS05575 PF06962 Putative rRNA methylase DQQ11_RS05580 PF01569 PAP2 superfamily DQQ11_RS05585 PF13603 Leucyl-tRNA synthetase, Domain 2 DQQ11_RS05585 PF09334 tRNA synthetases class I (M) DQQ11_RS05585 PF00133 tRNA synthetases class I (I, L, M and V) DQQ11_RS05585 PF08264 Anticodon-binding domain of tRNA DQQ11_RS05590 PF14667 Polysaccharide biosynthesis C-terminal domain DQQ11_RS05590 PF01943 Polysaccharide biosynthesis protein DQQ11_RS05595 PF00849 RNA pseudouridylate synthase DQQ11_RS05595 PF01479 S4 domain DQQ11_RS05600 PF01256 Carbohydrate kinase DQQ11_RS05605 PF01546 Peptidase family M20/M25/M40 DQQ11_RS05615 PF17912 MalK OB fold domain DQQ11_RS05615 PF00005 ABC transporter DQQ11_RS05620 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS05625 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS05635 PF03009 Glycerophosphoryl diester phosphodiesterase family DQQ11_RS05640 PF01712 Deoxynucleoside kinase DQQ11_RS05645 PF01741 Large-conductance mechanosensitive channel, MscL DQQ11_RS05665 PF00005 ABC transporter DQQ11_RS05670 PF00072 Response regulator receiver domain DQQ11_RS05670 PF04397 LytTr DNA-binding domain DQQ11_RS05680 PF01625 Peptide methionine sulfoxide reductase DQQ11_RS05685 PF13411 MerR HTH family regulatory protein DQQ11_RS05695 PF00892 EamA-like transporter family DQQ11_RS05720 PF00072 Response regulator receiver domain DQQ11_RS05720 PF04397 LytTr DNA-binding domain DQQ11_RS05740 PF01047 MarR family DQQ11_RS05755 PF17755 UvrA DNA-binding domain DQQ11_RS05755 PF00005 ABC transporter DQQ11_RS05755 PF17760 UvrA interaction domain DQQ11_RS05790 PF07457 Protein of unknown function (DUF1516) DQQ11_RS05795 PF02574 Homocysteine S-methyltransferase DQQ11_RS05795 PF02219 Methylenetetrahydrofolate reductase DQQ11_RS05800 PF08267 Cobalamin-independent synthase, N-terminal domain DQQ11_RS05800 PF01717 Cobalamin-independent synthase, Catalytic domain DQQ11_RS05810 PF01747 ATP-sulfurylase DQQ11_RS05810 PF14306 PUA-like domain DQQ11_RS05820 PF01368 DHH family DQQ11_RS05820 PF02272 DHHA1 domain DQQ11_RS05830 PF02080 TrkA-C domain DQQ11_RS05830 PF03600 Citrate transporter DQQ11_RS05835 PF01554 MatE DQQ11_RS05855 PF13673 Acetyltransferase (GNAT) domain DQQ11_RS05860 PF00750 tRNA synthetases class I (R) DQQ11_RS05860 PF05746 DALR anticodon binding domain DQQ11_RS05860 PF03485 Arginyl tRNA synthetase N terminal domain DQQ11_RS05870 PF12704 MacB-like periplasmic core domain DQQ11_RS05870 PF02687 FtsX-like permease family DQQ11_RS05870 PF00005 ABC transporter DQQ11_RS05880 PF00874 PRD domain DQQ11_RS05880 PF00158 Sigma-54 interaction domain DQQ11_RS05890 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DQQ11_RS05895 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQQ11_RS05900 PF02378 Phosphotransferase system, EIIC DQQ11_RS05905 PF00232 Glycosyl hydrolase family 1 DQQ11_RS05915 PF03734 L,D-transpeptidase catalytic domain DQQ11_RS05920 PF00550 Phosphopantetheine attachment site DQQ11_RS05925 PF00155 Aminotransferase class I and II DQQ11_RS05925 PF00392 Bacterial regulatory proteins, gntR family DQQ11_RS05935 PF00155 Aminotransferase class I and II DQQ11_RS05940 PF02863 Arginine repressor, C-terminal domain DQQ11_RS05940 PF01316 Arginine repressor, DNA binding domain DQQ11_RS05950 PF00905 Penicillin binding protein transpeptidase domain DQQ11_RS05950 PF00912 Transglycosylase DQQ11_RS05955 PF06133 Control of competence regulator ComK, YlbF/YmcA DQQ11_RS05960 PF00149 Calcineurin-like phosphoesterase DQQ11_RS05965 PF13514 AAA domain DQQ11_RS05970 PF01966 HD domain DQQ11_RS05985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQQ11_RS05985 PF03466 LysR substrate binding domain DQQ11_RS05995 PF04205 FMN-binding domain DQQ11_RS05995 PF00890 FAD binding domain DQQ11_RS05995 PF03358 NADPH-dependent FMN reductase DQQ11_RS06000 PF03358 NADPH-dependent FMN reductase DQQ11_RS06000 PF00890 FAD binding domain DQQ11_RS06000 PF04205 FMN-binding domain DQQ11_RS06020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQQ11_RS06020 PF00672 HAMP domain DQQ11_RS06020 PF00512 His Kinase A (phospho-acceptor) domain DQQ11_RS06025 PF00486 Transcriptional regulatory protein, C terminal DQQ11_RS06025 PF00072 Response regulator receiver domain DQQ11_RS06035 PF00535 Glycosyl transferase family 2 DQQ11_RS06040 PF09335 SNARE associated Golgi protein DQQ11_RS06045 PF00535 Glycosyl transferase family 2 DQQ11_RS06065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DQQ11_RS06065 PF01872 RibD C-terminal domain DQQ11_RS06070 PF00677 Lumazine binding domain DQQ11_RS06075 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DQQ11_RS06075 PF00925 GTP cyclohydrolase II DQQ11_RS06080 PF00885 6,7-dimethyl-8-ribityllumazine synthase DQQ11_RS06095 PF13545 Crp-like helix-turn-helix domain DQQ11_RS06095 PF00027 Cyclic nucleotide-binding domain DQQ11_RS06105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DQQ11_RS06105 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQQ11_RS06135 PF00639 PPIC-type PPIASE domain DQQ11_RS06145 PF01230 HIT domain DQQ11_RS06150 PF00005 ABC transporter DQQ11_RS06155 PF05975 Bacterial ABC transporter protein EcsB DQQ11_RS06160 PF01636 Phosphotransferase enzyme family DQQ11_RS06165 PF02390 Putative methyltransferase DQQ11_RS06175 PF01588 Putative tRNA binding domain DQQ11_RS06175 PF14794 Domain of unknown function (DUF4479) DQQ11_RS06180 PF17854 FtsK alpha domain DQQ11_RS06180 PF09397 Ftsk gamma domain DQQ11_RS06180 PF01580 FtsK/SpoIIIE family DQQ11_RS06185 PF02875 Mur ligase family, glutamate ligase domain DQQ11_RS06185 PF01225 Mur ligase family, catalytic domain DQQ11_RS06185 PF08245 Mur ligase middle domain DQQ11_RS06195 PF02421 Ferrous iron transport protein B DQQ11_RS06195 PF07664 Ferrous iron transport protein B C terminus DQQ11_RS06195 PF07670 Nucleoside recognition DQQ11_RS06195 PF17910 FeoB cytosolic helical domain DQQ11_RS06205 PF00005 ABC transporter DQQ11_RS06210 PF01458 Uncharacterized protein family (UPF0051) DQQ11_RS06215 PF00266 Aminotransferase class-V DQQ11_RS06220 PF01592 NifU-like N terminal domain DQQ11_RS06225 PF01458 Uncharacterized protein family (UPF0051) DQQ11_RS06230 PF01883 Iron-sulfur cluster assembly protein DQQ11_RS06240 PF01027 Inhibitor of apoptosis-promoting Bax1 DQQ11_RS06245 PF00476 DNA polymerase family A DQQ11_RS06245 PF01367 5'-3' exonuclease, C-terminal SAM fold DQQ11_RS06245 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DQQ11_RS06250 PF06827 Zinc finger found in FPG and IleRS DQQ11_RS06250 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DQQ11_RS06250 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DQQ11_RS06255 PF01121 Dephospho-CoA kinase DQQ11_RS06260 PF03477 ATP cone domain DQQ11_RS06265 PF07261 Replication initiation and membrane attachment DQQ11_RS06270 PF07319 Primosomal protein DnaI N-terminus DQQ11_RS06270 PF01695 IstB-like ATP binding protein DQQ11_RS06275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DQQ11_RS06275 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DQQ11_RS06275 PF03129 Anticodon binding domain DQQ11_RS06275 PF02824 TGS domain DQQ11_RS06280 PF00707 Translation initiation factor IF-3, C-terminal domain DQQ11_RS06280 PF05198 Translation initiation factor IF-3, N-terminal domain DQQ11_RS06285 PF01632 Ribosomal protein L35 DQQ11_RS06290 PF00453 Ribosomal protein L20 DQQ11_RS06300 PF05496 Holliday junction DNA helicase RuvB P-loop domain DQQ11_RS06300 PF12002 MgsA AAA+ ATPase C terminal DQQ11_RS06300 PF16193 AAA C-terminal domain DQQ11_RS06310 PF01638 HxlR-like helix-turn-helix DQQ11_RS06315 PF01177 Asp/Glu/Hydantoin racemase DQQ11_RS06320 PF00535 Glycosyl transferase family 2 DQQ11_RS06335 PF01926 50S ribosome-binding GTPase DQQ11_RS06340 PF01985 CRS1 / YhbY (CRM) domain DQQ11_RS06345 PF01467 Cytidylyltransferase-like DQQ11_RS06350 PF01966 HD domain DQQ11_RS06360 PF13649 Methyltransferase domain DQQ11_RS06365 PF05636 HIGH Nucleotidyl Transferase DQQ11_RS06375 PF01783 Ribosomal L32p protein family DQQ11_RS06390 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DQQ11_RS06390 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DQQ11_RS06395 PF16193 AAA C-terminal domain DQQ11_RS06395 PF12002 MgsA AAA+ ATPase C terminal DQQ11_RS06395 PF00004 ATPase family associated with various cellular activities (AAA) DQQ11_RS06400 PF00486 Transcriptional regulatory protein, C terminal DQQ11_RS06400 PF00072 Response regulator receiver domain DQQ11_RS06405 PF00512 His Kinase A (phospho-acceptor) domain DQQ11_RS06405 PF18719 ArlS sensor domain DQQ11_RS06405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQQ11_RS06415 PF13476 AAA domain DQQ11_RS06420 PF00149 Calcineurin-like phosphoesterase DQQ11_RS06420 PF12320 Type 5 capsule protein repressor C-terminal domain DQQ11_RS06430 PF02096 60Kd inner membrane protein DQQ11_RS06435 PF00708 Acylphosphatase DQQ11_RS06440 PF00588 SpoU rRNA Methylase family DQQ11_RS06440 PF08032 RNA 2'-O ribose methyltransferase substrate binding DQQ11_RS06450 PF01638 HxlR-like helix-turn-helix DQQ11_RS06455 PF01409 tRNA synthetases class II core domain (F) DQQ11_RS06455 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DQQ11_RS06460 PF03147 Ferredoxin-fold anticodon binding domain DQQ11_RS06460 PF01588 Putative tRNA binding domain DQQ11_RS06460 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DQQ11_RS06460 PF03484 tRNA synthetase B5 domain DQQ11_RS06460 PF03483 B3/4 domain DQQ11_RS06465 PF02618 YceG-like family DQQ11_RS06470 PF00485 Phosphoribulokinase / Uridine kinase family DQQ11_RS06475 PF01272 Transcription elongation factor, GreA/GreB, C-term DQQ11_RS06475 PF03449 Transcription elongation factor, N-terminal DQQ11_RS06495 PF01521 Iron-sulphur cluster biosynthesis DQQ11_RS06505 PF00905 Penicillin binding protein transpeptidase domain DQQ11_RS06505 PF03717 Penicillin-binding Protein dimerisation domain DQQ11_RS06510 PF00471 Ribosomal protein L33 DQQ11_RS06515 PF01812 5-formyltetrahydrofolate cyclo-ligase family DQQ11_RS06520 PF01694 Rhomboid family DQQ11_RS06530 PF00480 ROK family DQQ11_RS06550 PF03009 Glycerophosphoryl diester phosphodiesterase family DQQ11_RS06560 PF13411 MerR HTH family regulatory protein DQQ11_RS06565 PF00120 Glutamine synthetase, catalytic domain DQQ11_RS06565 PF03951 Glutamine synthetase, beta-Grasp domain DQQ11_RS06610 PF00829 Ribosomal prokaryotic L21 protein DQQ11_RS06620 PF01016 Ribosomal L27 protein DQQ11_RS06625 PF00557 Metallopeptidase family M24 DQQ11_RS06625 PF01321 Creatinase/Prolidase N-terminal domain DQQ11_RS06630 PF01132 Elongation factor P (EF-P) OB domain DQQ11_RS06630 PF08207 Elongation factor P (EF-P) KOW-like domain DQQ11_RS06630 PF09285 Elongation factor P, C-terminal DQQ11_RS06635 PF03780 Asp23 family, cell envelope-related function DQQ11_RS06640 PF01029 NusB family DQQ11_RS06645 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DQQ11_RS06645 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DQQ11_RS06650 PF02601 Exonuclease VII, large subunit DQQ11_RS06650 PF13742 OB-fold nucleic acid binding domain DQQ11_RS06655 PF02609 Exonuclease VII small subunit DQQ11_RS06660 PF00348 Polyprenyl synthetase DQQ11_RS06665 PF01479 S4 domain DQQ11_RS06665 PF01728 FtsJ-like methyltransferase DQQ11_RS06670 PF02863 Arginine repressor, C-terminal domain DQQ11_RS06670 PF01316 Arginine repressor, DNA binding domain DQQ11_RS06675 PF13476 AAA domain DQQ11_RS06680 PF00005 ABC transporter DQQ11_RS06680 PF00571 CBS domain DQQ11_RS06685 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS06690 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DQQ11_RS06695 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS06705 PF00625 Guanylate kinase DQQ11_RS06710 PF01192 RNA polymerase Rpb6 DQQ11_RS06715 PF02441 Flavoprotein DQQ11_RS06715 PF04127 DNA / pantothenate metabolism flavoprotein DQQ11_RS06720 PF04851 Type III restriction enzyme, res subunit DQQ11_RS06720 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DQQ11_RS06720 PF00271 Helicase conserved C-terminal domain DQQ11_RS06720 PF17764 3′ DNA-binding domain (3′BD) DQQ11_RS06720 PF18074 Primosomal protein N C-terminal domain DQQ11_RS06725 PF02911 Formyl transferase, C-terminal domain DQQ11_RS06725 PF00551 Formyl transferase DQQ11_RS06730 PF01029 NusB family DQQ11_RS06730 PF01189 16S rRNA methyltransferase RsmB/F DQQ11_RS06740 PF00069 Protein kinase domain DQQ11_RS06740 PF03793 PASTA domain DQQ11_RS06745 PF03193 RsgA GTPase DQQ11_RS06745 PF16745 RsgA N-terminal domain DQQ11_RS06750 PF00834 Ribulose-phosphate 3 epimerase family DQQ11_RS06755 PF04263 Thiamin pyrophosphokinase, catalytic domain DQQ11_RS06755 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain DQQ11_RS06765 PF00830 Ribosomal L28 family DQQ11_RS06770 PF03780 Asp23 family, cell envelope-related function DQQ11_RS06775 PF13684 Dihydroxyacetone kinase family DQQ11_RS06775 PF02734 DAK2 domain DQQ11_RS06780 PF00271 Helicase conserved C-terminal domain DQQ11_RS06780 PF17191 RecG wedge domain DQQ11_RS06780 PF00270 DEAD/DEAH box helicase DQQ11_RS06785 PF02504 Fatty acid synthesis protein DQQ11_RS06790 PF00550 Phosphopantetheine attachment site DQQ11_RS06795 PF14622 Ribonuclease-III-like DQQ11_RS06795 PF00035 Double-stranded RNA binding motif DQQ11_RS06800 PF02463 RecF/RecN/SMC N terminal domain DQQ11_RS06800 PF06470 SMC proteins Flexible Hinge Domain DQQ11_RS06805 PF02881 SRP54-type protein, helical bundle domain DQQ11_RS06805 PF00448 SRP54-type protein, GTPase domain DQQ11_RS06810 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DQQ11_RS06815 PF02978 Signal peptide binding domain DQQ11_RS06815 PF00448 SRP54-type protein, GTPase domain DQQ11_RS06815 PF02881 SRP54-type protein, helical bundle domain DQQ11_RS06820 PF00886 Ribosomal protein S16 DQQ11_RS06830 PF01782 RimM N-terminal domain DQQ11_RS06830 PF05239 PRC-barrel domain DQQ11_RS06835 PF01746 tRNA (Guanine-1)-methyltransferase DQQ11_RS06840 PF01245 Ribosomal protein L19 DQQ11_RS06860 PF00005 ABC transporter DQQ11_RS06870 PF00425 chorismate binding enzyme DQQ11_RS06870 PF04715 Anthranilate synthase component I, N terminal region DQQ11_RS06875 PF00591 Glycosyl transferase family, a/b domain DQQ11_RS06875 PF00117 Glutamine amidotransferase class-I DQQ11_RS06875 PF02885 Glycosyl transferase family, helical bundle domain DQQ11_RS06880 PF02885 Glycosyl transferase family, helical bundle domain DQQ11_RS06880 PF00591 Glycosyl transferase family, a/b domain DQQ11_RS06885 PF00218 Indole-3-glycerol phosphate synthase DQQ11_RS06890 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DQQ11_RS06895 PF00291 Pyridoxal-phosphate dependent enzyme DQQ11_RS06900 PF00290 Tryptophan synthase alpha chain DQQ11_RS06925 PF07687 Peptidase dimerisation domain DQQ11_RS06925 PF01546 Peptidase family M20/M25/M40 DQQ11_RS06930 PF08240 Alcohol dehydrogenase GroES-like domain DQQ11_RS06930 PF00107 Zinc-binding dehydrogenase DQQ11_RS06940 PF00106 short chain dehydrogenase DQQ11_RS06950 PF07977 FabA-like domain DQQ11_RS06955 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DQQ11_RS06955 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DQQ11_RS06960 PF00550 Phosphopantetheine attachment site DQQ11_RS06965 PF00698 Acyl transferase domain DQQ11_RS06975 PF02801 Beta-ketoacyl synthase, C-terminal domain DQQ11_RS06975 PF00109 Beta-ketoacyl synthase, N-terminal domain DQQ11_RS06980 PF00364 Biotin-requiring enzyme DQQ11_RS06985 PF07977 FabA-like domain DQQ11_RS06990 PF02785 Biotin carboxylase C-terminal domain DQQ11_RS06990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DQQ11_RS06990 PF00289 Biotin carboxylase, N-terminal domain DQQ11_RS06995 PF01039 Carboxyl transferase domain DQQ11_RS07000 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DQQ11_RS07015 PF04474 Protein of unknown function (DUF554) DQQ11_RS07020 PF03466 LysR substrate binding domain DQQ11_RS07020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQQ11_RS07025 PF03061 Thioesterase superfamily DQQ11_RS07030 PF03193 RsgA GTPase DQQ11_RS07040 PF07690 Major Facilitator Superfamily DQQ11_RS07100 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DQQ11_RS07115 PF03073 TspO/MBR family DQQ11_RS07125 PF05656 Protein of unknown function (DUF805) DQQ11_RS07130 PF00781 Diacylglycerol kinase catalytic domain DQQ11_RS07145 PF04226 Transglycosylase associated protein DQQ11_RS07150 PF05532 CsbD-like DQQ11_RS07160 PF03577 Peptidase family C69 DQQ11_RS07165 PF01361 Tautomerase enzyme DQQ11_RS07170 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DQQ11_RS07170 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DQQ11_RS07200 PF00202 Aminotransferase class-III DQQ11_RS07205 PF13520 Amino acid permease DQQ11_RS07215 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DQQ11_RS07215 PF01189 16S rRNA methyltransferase RsmB/F DQQ11_RS07215 PF17126 RsmF rRNA methyltransferase first C-terminal domain DQQ11_RS07230 PF03636 Glycosyl hydrolase family 65, N-terminal domain DQQ11_RS07230 PF03632 Glycosyl hydrolase family 65 central catalytic domain DQQ11_RS07230 PF03633 Glycosyl hydrolase family 65, C-terminal domain DQQ11_RS07235 PF01263 Aldose 1-epimerase DQQ11_RS07240 PF01070 FMN-dependent dehydrogenase DQQ11_RS07245 PF08544 GHMP kinases C terminal DQQ11_RS07245 PF00288 GHMP kinases N terminal domain DQQ11_RS07255 PF00288 GHMP kinases N terminal domain DQQ11_RS07265 PF04851 Type III restriction enzyme, res subunit DQQ11_RS07265 PF00929 Exonuclease DQQ11_RS07265 PF13307 Helicase C-terminal domain DQQ11_RS07275 PF00155 Aminotransferase class I and II DQQ11_RS07280 PF01336 OB-fold nucleic acid binding domain DQQ11_RS07280 PF00152 tRNA synthetases class II (D, K and N) DQQ11_RS07295 PF00005 ABC transporter DQQ11_RS07295 PF09383 NIL domain DQQ11_RS07300 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS07305 PF03180 NLPA lipoprotein DQQ11_RS07315 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS07320 PF01547 Bacterial extracellular solute-binding protein DQQ11_RS07325 PF00005 ABC transporter DQQ11_RS07325 PF08402 TOBE domain DQQ11_RS07330 PF00905 Penicillin binding protein transpeptidase domain DQQ11_RS07330 PF00912 Transglycosylase DQQ11_RS07335 PF03838 Recombination protein U DQQ11_RS07340 PF06908 YspA SLOG family DQQ11_RS07345 PF05103 DivIVA protein DQQ11_RS07355 PF01170 Putative RNA methylase family UPF0020 DQQ11_RS07355 PF02926 THUMP domain DQQ11_RS07360 PF00326 Prolyl oligopeptidase family DQQ11_RS07370 PF00535 Glycosyl transferase family 2 DQQ11_RS07390 PF02016 LD-carboxypeptidase N-terminal domain DQQ11_RS07390 PF17676 LD-carboxypeptidase C-terminal domain DQQ11_RS07400 PF00005 ABC transporter DQQ11_RS07415 PF01266 FAD dependent oxidoreductase DQQ11_RS07430 PF01268 Formate--tetrahydrofolate ligase DQQ11_RS07435 PF01252 Signal peptidase (SPase) II DQQ11_RS07440 PF00849 RNA pseudouridylate synthase DQQ11_RS07440 PF01479 S4 domain DQQ11_RS07445 PF00156 Phosphoribosyl transferase domain DQQ11_RS07450 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DQQ11_RS07450 PF00117 Glutamine amidotransferase class-I DQQ11_RS07455 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DQQ11_RS07455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DQQ11_RS07455 PF02142 MGS-like domain DQQ11_RS07465 PF00300 Histidine phosphatase superfamily (branch 1) DQQ11_RS07470 PF08818 Domain of unknown function (DU1801) DQQ11_RS07495 PF00005 ABC transporter DQQ11_RS07500 PF12679 ABC-2 family transporter protein DQQ11_RS07505 PF05670 NFACT protein RNA binding domain DQQ11_RS07515 PF02645 Uncharacterised protein, DegV family COG1307 DQQ11_RS07575 PF00324 Amino acid permease DQQ11_RS07595 PF02652 L-lactate permease DQQ11_RS07605 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DQQ11_RS07610 PF08240 Alcohol dehydrogenase GroES-like domain DQQ11_RS07610 PF16912 Glucose dehydrogenase C-terminus DQQ11_RS07615 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DQQ11_RS07620 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DQQ11_RS07625 PF13673 Acetyltransferase (GNAT) domain DQQ11_RS07630 PF01047 MarR family DQQ11_RS07635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DQQ11_RS07635 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQQ11_RS07665 PF01625 Peptide methionine sulfoxide reductase DQQ11_RS07670 PF01641 SelR domain DQQ11_RS07675 PF02833 DHHA2 domain DQQ11_RS07675 PF01368 DHH family DQQ11_RS07680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQQ11_RS07680 PF03466 LysR substrate binding domain DQQ11_RS07685 PF00521 DNA gyrase/topoisomerase IV, subunit A DQQ11_RS07685 PF03989 DNA gyrase C-terminal domain, beta-propeller DQQ11_RS07690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQQ11_RS07690 PF01751 Toprim domain DQQ11_RS07690 PF00204 DNA gyrase B DQQ11_RS07690 PF00986 DNA gyrase B subunit, carboxyl terminus DQQ11_RS07695 PF02660 Glycerol-3-phosphate acyltransferase DQQ11_RS07700 PF01263 Aldose 1-epimerase DQQ11_RS07705 PF00004 ATPase family associated with various cellular activities (AAA) DQQ11_RS07705 PF07724 AAA domain (Cdc48 subfamily) DQQ11_RS07705 PF10431 C-terminal, D2-small domain, of ClpB protein DQQ11_RS07710 PF00227 Proteasome subunit DQQ11_RS07715 PF00589 Phage integrase family DQQ11_RS07715 PF02899 Phage integrase, N-terminal SAM-like domain DQQ11_RS07720 PF01134 Glucose inhibited division protein A DQQ11_RS07725 PF01751 Toprim domain DQQ11_RS07725 PF01131 DNA topoisomerase DQQ11_RS07725 PF01396 Topoisomerase DNA binding C4 zinc finger DQQ11_RS07730 PF18255 DNA processing protein A sterile alpha motif domain DQQ11_RS07730 PF02481 DNA recombination-mediator protein A DQQ11_RS07735 PF01351 Ribonuclease HII DQQ11_RS07740 PF01926 50S ribosome-binding GTPase DQQ11_RS07750 PF01717 Cobalamin-independent synthase, Catalytic domain DQQ11_RS07755 PF03466 LysR substrate binding domain DQQ11_RS07755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQQ11_RS07770 PF07690 Major Facilitator Superfamily DQQ11_RS07780 PF17820 PDZ domain DQQ11_RS07780 PF03572 Peptidase family S41 DQQ11_RS07780 PF01471 Putative peptidoglycan binding domain DQQ11_RS07785 PF06855 YozE SAM-like fold DQQ11_RS07790 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) DQQ11_RS07795 PF13472 GDSL-like Lipase/Acylhydrolase family DQQ11_RS07800 PF02645 Uncharacterised protein, DegV family COG1307 DQQ11_RS07805 PF00186 Dihydrofolate reductase DQQ11_RS07810 PF00303 Thymidylate synthase DQQ11_RS07815 PF16326 ABC transporter C-terminal domain DQQ11_RS07815 PF12848 ABC transporter DQQ11_RS07815 PF00005 ABC transporter DQQ11_RS07825 PF13735 tRNA nucleotidyltransferase domain 2 putative DQQ11_RS07825 PF12627 Probable RNA and SrmB- binding site of polymerase A DQQ11_RS07825 PF01743 Poly A polymerase head domain DQQ11_RS07830 PF01113 Dihydrodipicolinate reductase, N-terminus DQQ11_RS07830 PF05173 Dihydrodipicolinate reductase, C-terminus DQQ11_RS07845 PF00216 Bacterial DNA-binding protein DQQ11_RS07855 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DQQ11_RS07855 PF01926 50S ribosome-binding GTPase DQQ11_RS07860 PF00575 S1 RNA binding domain DQQ11_RS07865 PF02224 Cytidylate kinase DQQ11_RS07875 PF00270 DEAD/DEAH box helicase DQQ11_RS07875 PF00271 Helicase conserved C-terminal domain DQQ11_RS07885 PF12822 ECF transporter, substrate-specific component DQQ11_RS07890 PF00849 RNA pseudouridylate synthase DQQ11_RS07890 PF01479 S4 domain DQQ11_RS07895 PF04079 Segregation and condensation complex subunit ScpB DQQ11_RS07900 PF02616 Segregation and condensation protein ScpA DQQ11_RS07905 PF00583 Acetyltransferase (GNAT) family DQQ11_RS07910 PF02899 Phage integrase, N-terminal SAM-like domain DQQ11_RS07910 PF00589 Phage integrase family DQQ11_RS07915 PF13509 S1 domain DQQ11_RS07915 PF17783 CvfB-like winged helix domain DQQ11_RS07920 PF04284 Protein of unknown function (DUF441) DQQ11_RS07925 PF00391 PEP-utilising enzyme, mobile domain DQQ11_RS07925 PF00224 Pyruvate kinase, barrel domain DQQ11_RS07925 PF02887 Pyruvate kinase, alpha/beta domain DQQ11_RS07930 PF00365 Phosphofructokinase DQQ11_RS07935 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DQQ11_RS07935 PF07733 Bacterial DNA polymerase III alpha NTPase domain DQQ11_RS07935 PF14579 Helix-hairpin-helix motif DQQ11_RS07935 PF01336 OB-fold nucleic acid binding domain DQQ11_RS07935 PF02811 PHP domain DQQ11_RS07945 PF00004 ATPase family associated with various cellular activities (AAA) DQQ11_RS07945 PF02861 Clp amino terminal domain, pathogenicity island component DQQ11_RS07945 PF17871 AAA lid domain DQQ11_RS07945 PF07724 AAA domain (Cdc48 subfamily) DQQ11_RS07945 PF10431 C-terminal, D2-small domain, of ClpB protein DQQ11_RS07950 PF01546 Peptidase family M20/M25/M40 DQQ11_RS07950 PF07687 Peptidase dimerisation domain DQQ11_RS07955 PF01784 NIF3 (NGG1p interacting factor 3) DQQ11_RS07960 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DQQ11_RS07970 PF01061 ABC-2 type transporter DQQ11_RS07975 PF13732 Domain of unknown function (DUF4162) DQQ11_RS07975 PF00005 ABC transporter DQQ11_RS07985 PF00391 PEP-utilising enzyme, mobile domain DQQ11_RS07985 PF02896 PEP-utilising enzyme, TIM barrel domain DQQ11_RS07985 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DQQ11_RS07995 PF01047 MarR family DQQ11_RS08020 PF00403 Heavy-metal-associated domain DQQ11_RS08025 PF00113 Enolase, C-terminal TIM barrel domain DQQ11_RS08025 PF03952 Enolase, N-terminal domain DQQ11_RS08030 PF07690 Major Facilitator Superfamily DQQ11_RS08040 PF07687 Peptidase dimerisation domain DQQ11_RS08040 PF01546 Peptidase family M20/M25/M40 DQQ11_RS08045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DQQ11_RS08045 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQQ11_RS08050 PF00455 DeoR C terminal sensor domain DQQ11_RS08050 PF08220 DeoR-like helix-turn-helix domain DQQ11_RS08060 PF03960 ArsC family DQQ11_RS08080 PF13419 Haloacid dehalogenase-like hydrolase DQQ11_RS08085 PF12464 Maltose acetyltransferase DQQ11_RS08085 PF14602 Hexapeptide repeat of succinyl-transferase DQQ11_RS08085 PF00132 Bacterial transferase hexapeptide (six repeats) DQQ11_RS08090 PF01380 SIS domain DQQ11_RS08090 PF01418 Helix-turn-helix domain, rpiR family DQQ11_RS08110 PF03466 LysR substrate binding domain DQQ11_RS08110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQQ11_RS08115 PF08240 Alcohol dehydrogenase GroES-like domain DQQ11_RS08115 PF00107 Zinc-binding dehydrogenase DQQ11_RS08125 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DQQ11_RS08125 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQQ11_RS08130 PF00196 Bacterial regulatory proteins, luxR family DQQ11_RS08130 PF00072 Response regulator receiver domain DQQ11_RS08135 PF07730 Histidine kinase DQQ11_RS08145 PF00005 ABC transporter DQQ11_RS08155 PF13673 Acetyltransferase (GNAT) domain DQQ11_RS08155 PF13302 Acetyltransferase (GNAT) domain DQQ11_RS08155 PF03352 Methyladenine glycosylase DQQ11_RS08155 PF00958 GMP synthase C terminal domain DQQ11_RS08155 PF00117 Glutamine amidotransferase class-I DQQ11_RS08170 PF00005 ABC transporter DQQ11_RS08190 PF00005 ABC transporter DQQ11_RS08195 PF00392 Bacterial regulatory proteins, gntR family DQQ11_RS08205 PF00140 Sigma-70 factor, region 1.2 DQQ11_RS08205 PF04539 Sigma-70 region 3 DQQ11_RS08205 PF04542 Sigma-70 region 2 DQQ11_RS08205 PF03979 Sigma-70 factor, region 1.1 DQQ11_RS08205 PF04545 Sigma-70, region 4 DQQ11_RS08210 PF01807 CHC2 zinc finger DQQ11_RS08210 PF10410 DnaB-helicase binding domain of primase DQQ11_RS08210 PF08275 DNA primase catalytic core, N-terminal domain DQQ11_RS08215 PF02092 Glycyl-tRNA synthetase beta subunit DQQ11_RS08220 PF02091 Glycyl-tRNA synthetase alpha subunit DQQ11_RS08225 PF11967 Recombination protein O N terminal DQQ11_RS08225 PF02565 Recombination protein O C terminal DQQ11_RS08230 PF01926 50S ribosome-binding GTPase DQQ11_RS08230 PF07650 KH domain DQQ11_RS08235 PF01219 Prokaryotic diacylglycerol kinase DQQ11_RS08240 PF02130 Uncharacterized protein family UPF0054 DQQ11_RS08245 PF02562 PhoH-like protein DQQ11_RS08250 PF09424 Yqey-like protein DQQ11_RS08255 PF01165 Ribosomal protein S21 DQQ11_RS08260 PF03618 Kinase/pyrophosphorylase DQQ11_RS08270 PF01261 Xylose isomerase-like TIM barrel DQQ11_RS08275 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DQQ11_RS08280 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DQQ11_RS08280 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DQQ11_RS08285 PF01625 Peptide methionine sulfoxide reductase DQQ11_RS08290 PF01336 OB-fold nucleic acid binding domain DQQ11_RS08290 PF02938 GAD domain DQQ11_RS08290 PF00152 tRNA synthetases class II (D, K and N) DQQ11_RS08295 PF03129 Anticodon binding domain DQQ11_RS08295 PF13393 Histidyl-tRNA synthetase DQQ11_RS08300 PF08239 Bacterial SH3 domain DQQ11_RS08300 PF01520 N-acetylmuramoyl-L-alanine amidase DQQ11_RS08305 PF03881 Fructosamine kinase DQQ11_RS08310 PF13419 Haloacid dehalogenase-like hydrolase DQQ11_RS08315 PF02580 D-Tyr-tRNA(Tyr) deacylase DQQ11_RS08320 PF02824 TGS domain DQQ11_RS08320 PF04607 Region found in RelA / SpoT proteins DQQ11_RS08320 PF13291 ACT domain DQQ11_RS08330 PF04452 RNA methyltransferase DQQ11_RS08340 PF02245 Methylpurine-DNA glycosylase (MPG) DQQ11_RS08355 PF00679 Elongation factor G C-terminus DQQ11_RS08355 PF00009 Elongation factor Tu GTP binding domain DQQ11_RS08355 PF03144 Elongation factor Tu domain 2 DQQ11_RS08355 PF06421 GTP-binding protein LepA C-terminus DQQ11_RS08360 PF04914 DltD protein DQQ11_RS08365 PF00550 Phosphopantetheine attachment site DQQ11_RS08370 PF03062 MBOAT, membrane-bound O-acyltransferase family DQQ11_RS08375 PF00501 AMP-binding enzyme DQQ11_RS08375 PF13193 AMP-binding enzyme C-terminal domain DQQ11_RS08385 PF00144 Beta-lactamase DQQ11_RS08385 PF11954 Domain of unknown function (DUF3471) DQQ11_RS08390 PF00684 DnaJ central domain DQQ11_RS08390 PF01556 DnaJ C terminal domain DQQ11_RS08390 PF00226 DnaJ domain DQQ11_RS08395 PF00012 Hsp70 protein DQQ11_RS08400 PF01025 GrpE DQQ11_RS08405 PF01628 HrcA protein C terminal domain DQQ11_RS08405 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DQQ11_RS08410 PF03306 Alpha-acetolactate decarboxylase DQQ11_RS08415 PF01687 Riboflavin kinase DQQ11_RS08415 PF06574 FAD synthetase DQQ11_RS08420 PF16198 tRNA pseudouridylate synthase B C-terminal domain DQQ11_RS08420 PF01509 TruB family pseudouridylate synthase (N terminal domain) DQQ11_RS08425 PF01202 Shikimate kinase DQQ11_RS08430 PF02153 Prephenate dehydrogenase DQQ11_RS08430 PF01842 ACT domain DQQ11_RS08435 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DQQ11_RS08445 PF01264 Chorismate synthase DQQ11_RS08450 PF07690 Major Facilitator Superfamily DQQ11_RS08455 PF02033 Ribosome-binding factor A DQQ11_RS08460 PF04760 Translation initiation factor IF-2, N-terminal region DQQ11_RS08460 PF00009 Elongation factor Tu GTP binding domain DQQ11_RS08460 PF11987 Translation-initiation factor 2 DQQ11_RS08465 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DQQ11_RS08470 PF04296 Protein of unknown function (DUF448) DQQ11_RS08475 PF13184 NusA-like KH domain DQQ11_RS08475 PF08529 NusA N-terminal domain DQQ11_RS08475 PF00575 S1 RNA binding domain DQQ11_RS08480 PF17384 RimP C-terminal SH3 domain DQQ11_RS08480 PF02576 RimP N-terminal domain DQQ11_RS08485 PF00929 Exonuclease DQQ11_RS08485 PF14480 DNA polymerase III polC-type N-terminus I DQQ11_RS08485 PF02811 PHP domain DQQ11_RS08485 PF11490 DNA polymerase III polC-type N-terminus II DQQ11_RS08485 PF14579 Helix-hairpin-helix motif DQQ11_RS08485 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DQQ11_RS08485 PF07733 Bacterial DNA polymerase III alpha NTPase domain DQQ11_RS08490 PF04073 Aminoacyl-tRNA editing domain DQQ11_RS08490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DQQ11_RS08490 PF03129 Anticodon binding domain DQQ11_RS08495 PF02163 Peptidase family M50 DQQ11_RS08495 PF17820 PDZ domain DQQ11_RS08505 PF01255 Putative undecaprenyl diphosphate synthase DQQ11_RS08510 PF01765 Ribosome recycling factor DQQ11_RS08515 PF00696 Amino acid kinase family DQQ11_RS08520 PF00889 Elongation factor TS DQQ11_RS08525 PF00318 Ribosomal protein S2 DQQ11_RS08535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQQ11_RS08535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DQQ11_RS08540 PF01541 GIY-YIG catalytic domain DQQ11_RS08545 PF05175 Methyltransferase small domain DQQ11_RS08550 PF01553 Acyltransferase DQQ11_RS08555 PF03672 Uncharacterised protein family (UPF0154) DQQ11_RS08560 PF05979 Bacterial protein of unknown function (DUF896) DQQ11_RS08565 PF01726 LexA DNA binding domain DQQ11_RS08565 PF00717 Peptidase S24-like DQQ11_RS08580 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal DQQ11_RS08580 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal DQQ11_RS08595 PF00535 Glycosyl transferase family 2 DQQ11_RS08605 PF03816 Cell envelope-related transcriptional attenuator domain DQQ11_RS08610 PF00005 ABC transporter DQQ11_RS08620 PF01098 Cell cycle protein DQQ11_RS08640 PF01476 LysM domain DQQ11_RS08670 PF00877 NlpC/P60 family DQQ11_RS08815 PF01381 Helix-turn-helix DQQ11_RS08885 PF01906 Putative heavy-metal-binding DQQ11_RS08900 PF00156 Phosphoribosyl transferase domain DQQ11_RS08905 PF17768 RecJ OB domain DQQ11_RS08905 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DQQ11_RS08905 PF01368 DHH family DQQ11_RS08905 PF02272 DHHA1 domain DQQ11_RS08910 PF06305 Lipopolysaccharide assembly protein A domain DQQ11_RS08915 PF00106 short chain dehydrogenase DQQ11_RS08920 PF00753 Metallo-beta-lactamase superfamily DQQ11_RS08920 PF12706 Beta-lactamase superfamily domain DQQ11_RS08930 PF01926 50S ribosome-binding GTPase DQQ11_RS08930 PF01018 GTP1/OBG DQQ11_RS08930 PF09269 Domain of unknown function (DUF1967) DQQ11_RS08935 PF00455 DeoR C terminal sensor domain DQQ11_RS08935 PF08220 DeoR-like helix-turn-helix domain DQQ11_RS08940 PF00294 pfkB family carbohydrate kinase DQQ11_RS08945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DQQ11_RS08945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQQ11_RS08950 PF00149 Calcineurin-like phosphoesterase DQQ11_RS08960 PF00535 Glycosyl transferase family 2 DQQ11_RS08975 PF00534 Glycosyl transferases group 1 DQQ11_RS08975 PF13439 Glycosyltransferase Family 4 DQQ11_RS08980 PF02397 Bacterial sugar transferase DQQ11_RS08985 PF01370 NAD dependent epimerase/dehydratase family DQQ11_RS08995 PF13614 AAA domain DQQ11_RS09005 PF08459 UvrC Helix-hairpin-helix N-terminal DQQ11_RS09005 PF02151 UvrB/uvrC motif DQQ11_RS09005 PF01541 GIY-YIG catalytic domain DQQ11_RS09010 PF00005 ABC transporter DQQ11_RS09015 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS09035 PF01926 50S ribosome-binding GTPase DQQ11_RS09040 PF07724 AAA domain (Cdc48 subfamily) DQQ11_RS09040 PF10431 C-terminal, D2-small domain, of ClpB protein DQQ11_RS09040 PF06689 ClpX C4-type zinc finger DQQ11_RS09045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DQQ11_RS09045 PF05698 Bacterial trigger factor protein (TF) C-terminus DQQ11_RS09045 PF05697 Bacterial trigger factor protein (TF) DQQ11_RS09050 PF03144 Elongation factor Tu domain 2 DQQ11_RS09050 PF00009 Elongation factor Tu GTP binding domain DQQ11_RS09050 PF03143 Elongation factor Tu C-terminal domain DQQ11_RS09060 PF00753 Metallo-beta-lactamase superfamily DQQ11_RS09060 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DQQ11_RS09060 PF17770 Ribonuclease J C-terminal domain DQQ11_RS09065 PF00701 Dihydrodipicolinate synthetase family DQQ11_RS09070 PF07690 Major Facilitator Superfamily DQQ11_RS09075 PF00312 Ribosomal protein S15 DQQ11_RS09080 PF01649 Ribosomal protein S20 DQQ11_RS09085 PF06144 DNA polymerase III, delta subunit DQQ11_RS09090 PF03772 Competence protein DQQ11_RS09090 PF13567 Domain of unknown function (DUF4131) DQQ11_RS09090 PF00753 Metallo-beta-lactamase superfamily DQQ11_RS09095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DQQ11_RS09100 PF10531 SLBB domain DQQ11_RS09105 PF13180 PDZ domain DQQ11_RS09105 PF05362 Lon protease (S16) C-terminal proteolytic domain DQQ11_RS09110 PF01467 Cytidylyltransferase-like DQQ11_RS09120 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) DQQ11_RS09125 PF02785 Biotin carboxylase C-terminal domain DQQ11_RS09125 PF00289 Biotin carboxylase, N-terminal domain DQQ11_RS09125 PF00364 Biotin-requiring enzyme DQQ11_RS09125 PF02436 Conserved carboxylase domain DQQ11_RS09125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DQQ11_RS09125 PF00682 HMGL-like DQQ11_RS09130 PF01098 Cell cycle protein DQQ11_RS09140 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 DQQ11_RS09140 PF00535 Glycosyl transferase family 2 DQQ11_RS09165 PF00679 Elongation factor G C-terminus DQQ11_RS09165 PF14492 Elongation Factor G, domain II DQQ11_RS09165 PF00009 Elongation factor Tu GTP binding domain DQQ11_RS09165 PF03144 Elongation factor Tu domain 2 DQQ11_RS09170 PF00459 Inositol monophosphatase family DQQ11_RS09175 PF05256 Uncharacterised protein family (UPF0223) DQQ11_RS09180 PF00056 lactate/malate dehydrogenase, NAD binding domain DQQ11_RS09180 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DQQ11_RS09185 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQQ11_RS09185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DQQ11_RS09190 PF00364 Biotin-requiring enzyme DQQ11_RS09190 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DQQ11_RS09190 PF02817 e3 binding domain DQQ11_RS09195 PF02780 Transketolase, C-terminal domain DQQ11_RS09195 PF02779 Transketolase, pyrimidine binding domain DQQ11_RS09200 PF00676 Dehydrogenase E1 component DQQ11_RS09205 PF01327 Polypeptide deformylase DQQ11_RS09215 PF07288 Protein of unknown function (DUF1447) DQQ11_RS09220 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DQQ11_RS09220 PF17770 Ribonuclease J C-terminal domain DQQ11_RS09220 PF00753 Metallo-beta-lactamase superfamily DQQ11_RS09225 PF00781 Diacylglycerol kinase catalytic domain DQQ11_RS09235 PF06725 3D domain DQQ11_RS09235 PF01476 LysM domain DQQ11_RS09240 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DQQ11_RS09240 PF14572 Phosphoribosyl synthetase-associated domain DQQ11_RS09245 PF13538 UvrD-like helicase C-terminal domain DQQ11_RS09245 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DQQ11_RS09245 PF14490 Helix-hairpin-helix containing domain DQQ11_RS09255 PF00300 Histidine phosphatase superfamily (branch 1) DQQ11_RS09275 PF02080 TrkA-C domain DQQ11_RS09275 PF02254 TrkA-N domain DQQ11_RS09280 PF02386 Cation transport protein DQQ11_RS09295 PF00266 Aminotransferase class-V DQQ11_RS09300 PF01048 Phosphorylase superfamily DQQ11_RS09310 PF00293 NUDIX domain DQQ11_RS09315 PF01678 Diaminopimelate epimerase DQQ11_RS09325 PF00072 Response regulator receiver domain DQQ11_RS09325 PF04397 LytTr DNA-binding domain DQQ11_RS09335 PF00005 ABC transporter DQQ11_RS09340 PF08264 Anticodon-binding domain of tRNA DQQ11_RS09340 PF00133 tRNA synthetases class I (I, L, M and V) DQQ11_RS09340 PF06827 Zinc finger found in FPG and IleRS DQQ11_RS09345 PF05103 DivIVA protein DQQ11_RS09355 PF02325 YGGT family DQQ11_RS09360 PF04472 Cell division protein SepF DQQ11_RS09365 PF00091 Tubulin/FtsZ family, GTPase domain DQQ11_RS09365 PF12327 FtsZ family, C-terminal domain DQQ11_RS09370 PF11983 Membrane-attachment and polymerisation-promoting switch DQQ11_RS09370 PF02491 SHS2 domain inserted in FTSA DQQ11_RS09375 PF03799 Cell division protein FtsQ DQQ11_RS09375 PF08478 POTRA domain, FtsQ-type DQQ11_RS09380 PF04101 Glycosyltransferase family 28 C-terminal domain DQQ11_RS09380 PF03033 Glycosyltransferase family 28 N-terminal domain DQQ11_RS09385 PF08245 Mur ligase middle domain DQQ11_RS09385 PF02875 Mur ligase family, glutamate ligase domain DQQ11_RS09390 PF00953 Glycosyl transferase family 4 DQQ11_RS09390 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DQQ11_RS09395 PF03793 PASTA domain DQQ11_RS09395 PF00905 Penicillin binding protein transpeptidase domain DQQ11_RS09395 PF03717 Penicillin-binding Protein dimerisation domain DQQ11_RS09405 PF01795 MraW methylase family DQQ11_RS09410 PF02381 MraZ protein, putative antitoxin-like DQQ11_RS09435 PF17854 FtsK alpha domain DQQ11_RS09435 PF09397 Ftsk gamma domain DQQ11_RS09435 PF01580 FtsK/SpoIIIE family DQQ11_RS09440 PF00588 SpoU rRNA Methylase family DQQ11_RS09450 PF05525 Branched-chain amino acid transport protein DQQ11_RS09465 PF00253 Ribosomal protein S14p/S29e DQQ11_RS09470 PF01594 AI-2E family transporter DQQ11_RS09480 PF10282 Lactonase, 7-bladed beta-propeller DQQ11_RS09485 PF03932 CutC family DQQ11_RS09490 PF00849 RNA pseudouridylate synthase DQQ11_RS09495 PF01513 ATP-NAD kinase DQQ11_RS09500 PF04607 Region found in RelA / SpoT proteins DQQ11_RS09510 PF01432 Peptidase family M3 DQQ11_RS09510 PF08439 Oligopeptidase F DQQ11_RS09520 PF05389 Negative regulator of genetic competence (MecA) DQQ11_RS09525 PF03960 ArsC family DQQ11_RS09530 PF12706 Beta-lactamase superfamily domain DQQ11_RS09675 PF00575 S1 RNA binding domain DQQ11_RS09680 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DQQ11_RS09685 PF09335 SNARE associated Golgi protein DQQ11_RS09695 PF13344 Haloacid dehalogenase-like hydrolase DQQ11_RS09700 PF06265 Protein of unknown function (DUF1027) DQQ11_RS09705 PF02872 5'-nucleotidase, C-terminal domain DQQ11_RS09720 PF00324 Amino acid permease DQQ11_RS09725 PF00871 Acetokinase family DQQ11_RS09730 PF02384 N-6 DNA Methylase DQQ11_RS09760 PF00437 Type II/IV secretion system protein DQQ11_RS09765 PF00294 pfkB family carbohydrate kinase DQQ11_RS09765 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DQQ11_RS09770 PF01709 Transcriptional regulator DQQ11_RS09785 PF00356 Bacterial regulatory proteins, lacI family DQQ11_RS09790 PF01321 Creatinase/Prolidase N-terminal domain DQQ11_RS09790 PF00557 Metallopeptidase family M24 DQQ11_RS09795 PF13411 MerR HTH family regulatory protein DQQ11_RS09810 PF00924 Mechanosensitive ion channel DQQ11_RS09815 PF07687 Peptidase dimerisation domain DQQ11_RS09815 PF01546 Peptidase family M20/M25/M40 DQQ11_RS09820 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal DQQ11_RS09820 PF00132 Bacterial transferase hexapeptide (six repeats) DQQ11_RS09820 PF14602 Hexapeptide repeat of succinyl-transferase DQQ11_RS09835 PF01725 Ham1 family DQQ11_RS09840 PF01177 Asp/Glu/Hydantoin racemase DQQ11_RS09845 PF10702 Protein of unknown function (DUF2507) DQQ11_RS09850 PF00085 Thioredoxin DQQ11_RS09855 PF00488 MutS domain V DQQ11_RS09855 PF01713 Smr domain DQQ11_RS09865 PF06949 Protein of unknown function (DUF1292) DQQ11_RS09870 PF03652 Holliday junction resolvase DQQ11_RS09875 PF06135 IreB regulatory phosphoprotein DQQ11_RS09880 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DQQ11_RS09880 PF02272 DHHA1 domain DQQ11_RS09880 PF01411 tRNA synthetases class II (A) DQQ11_RS09885 PF00270 DEAD/DEAH box helicase DQQ11_RS09885 PF00271 Helicase conserved C-terminal domain DQQ11_RS09890 PF01368 DHH family DQQ11_RS09890 PF02272 DHHA1 domain DQQ11_RS09895 PF00817 impB/mucB/samB family DQQ11_RS09895 PF11799 impB/mucB/samB family C-terminal domain DQQ11_RS09900 PF02699 Preprotein translocase subunit DQQ11_RS09905 PF01702 Queuine tRNA-ribosyltransferase DQQ11_RS09910 PF02547 Queuosine biosynthesis protein DQQ11_RS09915 PF17864 RuvB AAA lid domain DQQ11_RS09915 PF05491 RuvB C-terminal winged helix domain DQQ11_RS09915 PF05496 Holliday junction DNA helicase RuvB P-loop domain DQQ11_RS09920 PF07499 RuvA, C-terminal domain DQQ11_RS09920 PF01330 RuvA N terminal domain DQQ11_RS09950 PF08676 MutL C terminal dimerisation domain DQQ11_RS09950 PF01119 DNA mismatch repair protein, C-terminal domain DQQ11_RS09955 PF00488 MutS domain V DQQ11_RS09955 PF05190 MutS family domain IV DQQ11_RS09955 PF05192 MutS domain III DQQ11_RS09955 PF01624 MutS domain I DQQ11_RS09955 PF05188 MutS domain II DQQ11_RS09960 PF13277 YmdB-like protein DQQ11_RS09965 PF12072 Domain of unknown function (DUF3552) DQQ11_RS09965 PF01966 HD domain DQQ11_RS09965 PF00013 KH domain DQQ11_RS09970 PF00154 recA bacterial DNA recombination protein DQQ11_RS09975 PF18146 Damage-inducible protein CinA KH domain DQQ11_RS09975 PF02464 Competence-damaged protein DQQ11_RS09975 PF00994 Probable molybdopterin binding domain DQQ11_RS09980 PF01066 CDP-alcohol phosphatidyltransferase DQQ11_RS09985 PF13464 Domain of unknown function (DUF4115) DQQ11_RS09990 PF00675 Insulinase (Peptidase family M16) DQQ11_RS09990 PF05193 Peptidase M16 inactive domain DQQ11_RS09995 PF05193 Peptidase M16 inactive domain DQQ11_RS10000 PF13840 ACT domain DQQ11_RS10000 PF00696 Amino acid kinase family DQQ11_RS10010 PF00497 Bacterial extracellular solute-binding proteins, family 3 DQQ11_RS10015 PF00005 ABC transporter DQQ11_RS10020 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS10025 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DQQ11_RS10030 PF03775 Septum formation inhibitor MinC, C-terminal domain DQQ11_RS10040 PF04085 rod shape-determining protein MreC DQQ11_RS10050 PF04002 RadC-like JAB domain DQQ11_RS10055 PF02875 Mur ligase family, glutamate ligase domain DQQ11_RS10055 PF08245 Mur ligase middle domain DQQ11_RS10060 PF10458 Valyl tRNA synthetase tRNA binding arm DQQ11_RS10060 PF08264 Anticodon-binding domain of tRNA DQQ11_RS10060 PF00133 tRNA synthetases class I (I, L, M and V) DQQ11_RS10065 PF08534 Redoxin DQQ11_RS10070 PF04262 Glutamate-cysteine ligase DQQ11_RS10070 PF02655 ATP-grasp domain DQQ11_RS10070 PF18419 ATP-grasp-like domain DQQ11_RS10080 PF02568 Thiamine biosynthesis protein (ThiI) DQQ11_RS10080 PF02926 THUMP domain DQQ11_RS10085 PF00266 Aminotransferase class-V DQQ11_RS10095 PF06160 Septation ring formation regulator, EzrA DQQ11_RS10100 PF13185 GAF domain DQQ11_RS10105 PF01479 S4 domain DQQ11_RS10105 PF00163 Ribosomal protein S4/S9 N-terminal domain DQQ11_RS10110 PF06335 Protein of unknown function (DUF1054) DQQ11_RS10125 PF01022 Bacterial regulatory protein, arsR family DQQ11_RS10130 PF00128 Alpha amylase, catalytic domain DQQ11_RS10140 PF03613 PTS system mannose/fructose/sorbose family IID component DQQ11_RS10145 PF03609 PTS system sorbose-specific iic component DQQ11_RS10150 PF03830 PTS system sorbose subfamily IIB component DQQ11_RS10155 PF00356 Bacterial regulatory proteins, lacI family DQQ11_RS10160 PF04262 Glutamate-cysteine ligase DQQ11_RS10160 PF18419 ATP-grasp-like domain DQQ11_RS10165 PF16193 AAA C-terminal domain DQQ11_RS10165 PF05496 Holliday junction DNA helicase RuvB P-loop domain DQQ11_RS10165 PF12002 MgsA AAA+ ATPase C terminal DQQ11_RS10180 PF00582 Universal stress protein family DQQ11_RS10200 PF07478 D-ala D-ala ligase C-terminus DQQ11_RS10200 PF01820 D-ala D-ala ligase N-terminus DQQ11_RS10205 PF00107 Zinc-binding dehydrogenase DQQ11_RS10205 PF08240 Alcohol dehydrogenase GroES-like domain DQQ11_RS10215 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DQQ11_RS10215 PF00056 lactate/malate dehydrogenase, NAD binding domain DQQ11_RS10220 PF03180 NLPA lipoprotein DQQ11_RS10225 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS10230 PF00005 ABC transporter DQQ11_RS10230 PF09383 NIL domain DQQ11_RS10235 PF01597 Glycine cleavage H-protein DQQ11_RS10240 PF01098 Cell cycle protein DQQ11_RS10250 PF01809 Putative membrane protein insertion efficiency factor DQQ11_RS10265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DQQ11_RS10270 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DQQ11_RS10270 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DQQ11_RS10275 PF02874 ATP synthase alpha/beta family, beta-barrel domain DQQ11_RS10275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DQQ11_RS10280 PF00231 ATP synthase DQQ11_RS10285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DQQ11_RS10285 PF00306 ATP synthase alpha/beta chain, C terminal domain DQQ11_RS10285 PF02874 ATP synthase alpha/beta family, beta-barrel domain DQQ11_RS10290 PF00213 ATP synthase delta (OSCP) subunit DQQ11_RS10295 PF00430 ATP synthase B/B' CF(0) DQQ11_RS10300 PF00137 ATP synthase subunit C DQQ11_RS10305 PF00119 ATP synthase A chain DQQ11_RS10310 PF00860 Permease family DQQ11_RS10325 PF00464 Serine hydroxymethyltransferase DQQ11_RS10330 PF03481 Putative GTP-binding controlling metal-binding DQQ11_RS10330 PF01300 Telomere recombination DQQ11_RS10335 PF17827 PrmC N-terminal domain DQQ11_RS10335 PF05175 Methyltransferase small domain DQQ11_RS10340 PF03462 PCRF domain DQQ11_RS10340 PF00472 RF-1 domain DQQ11_RS10345 PF00265 Thymidine kinase DQQ11_RS10350 PF08245 Mur ligase middle domain DQQ11_RS10350 PF08353 Domain of unknown function (DUF1727) DQQ11_RS10355 PF07685 CobB/CobQ-like glutamine amidotransferase domain DQQ11_RS10360 PF01238 Phosphomannose isomerase type I DQQ11_RS10365 PF00144 Beta-lactamase DQQ11_RS10375 PF01063 Amino-transferase class IV DQQ11_RS10390 PF00005 ABC transporter DQQ11_RS10390 PF00664 ABC transporter transmembrane region DQQ11_RS10395 PF00005 ABC transporter DQQ11_RS10395 PF00664 ABC transporter transmembrane region DQQ11_RS10405 PF01522 Polysaccharide deacetylase DQQ11_RS10430 PF01476 LysM domain DQQ11_RS10545 PF04327 Cysteine protease Prp DQQ11_RS10715 PF02899 Phage integrase, N-terminal SAM-like domain DQQ11_RS10715 PF00589 Phage integrase family DQQ11_RS10755 PF06458 MucBP domain DQQ11_RS10800 PF00005 ABC transporter DQQ11_RS10800 PF00664 ABC transporter transmembrane region DQQ11_RS10810 PF00005 ABC transporter DQQ11_RS10810 PF02687 FtsX-like permease family DQQ11_RS10810 PF12704 MacB-like periplasmic core domain DQQ11_RS10820 PF00342 Phosphoglucose isomerase DQQ11_RS10825 PF06800 Sugar transport protein DQQ11_RS10830 PF10672 S-adenosylmethionine-dependent methyltransferase DQQ11_RS10830 PF17785 PUA-like domain DQQ11_RS10835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQQ11_RS10835 PF00512 His Kinase A (phospho-acceptor) domain DQQ11_RS10835 PF00672 HAMP domain DQQ11_RS10840 PF00072 Response regulator receiver domain DQQ11_RS10840 PF00486 Transcriptional regulatory protein, C terminal DQQ11_RS10845 PF05167 Uncharacterised ACR (DUF711) DQQ11_RS10855 PF00892 EamA-like transporter family DQQ11_RS10875 PF07690 Major Facilitator Superfamily DQQ11_RS10895 PF00877 NlpC/P60 family DQQ11_RS10900 PF01037 Lrp/AsnC ligand binding domain DQQ11_RS10915 PF00990 Diguanylate cyclase, GGDEF domain DQQ11_RS10920 PF00005 ABC transporter DQQ11_RS10920 PF12848 ABC transporter DQQ11_RS10935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DQQ11_RS10950 PF02378 Phosphotransferase system, EIIC DQQ11_RS10950 PF00367 phosphotransferase system, EIIB DQQ11_RS10950 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQQ11_RS10955 PF08546 Ketopantoate reductase PanE/ApbA C terminal DQQ11_RS10955 PF02558 Ketopantoate reductase PanE/ApbA DQQ11_RS10960 PF02645 Uncharacterised protein, DegV family COG1307 DQQ11_RS10965 PF03447 Homoserine dehydrogenase, NAD binding domain DQQ11_RS10965 PF00742 Homoserine dehydrogenase DQQ11_RS10970 PF01053 Cys/Met metabolism PLP-dependent enzyme DQQ11_RS10975 PF04204 Homoserine O-succinyltransferase DQQ11_RS10990 PF02653 Branched-chain amino acid transport system / permease component DQQ11_RS10995 PF00005 ABC transporter DQQ11_RS11000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DQQ11_RS11000 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQQ11_RS11005 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DQQ11_RS11005 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DQQ11_RS11010 PF03741 Integral membrane protein TerC family DQQ11_RS11015 PF14602 Hexapeptide repeat of succinyl-transferase DQQ11_RS11015 PF12464 Maltose acetyltransferase DQQ11_RS11020 PF00155 Aminotransferase class I and II DQQ11_RS11025 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DQQ11_RS11030 PF01502 Phosphoribosyl-AMP cyclohydrolase DQQ11_RS11035 PF00977 Histidine biosynthesis protein DQQ11_RS11040 PF00977 Histidine biosynthesis protein DQQ11_RS11045 PF00117 Glutamine amidotransferase class-I DQQ11_RS11050 PF00475 Imidazoleglycerol-phosphate dehydratase DQQ11_RS11055 PF00815 Histidinol dehydrogenase DQQ11_RS11060 PF01634 ATP phosphoribosyltransferase DQQ11_RS11065 PF13393 Histidyl-tRNA synthetase DQQ11_RS11070 PF02811 PHP domain DQQ11_RS11095 PF01118 Semialdehyde dehydrogenase, NAD binding domain DQQ11_RS11095 PF02774 Semialdehyde dehydrogenase, dimerisation domain DQQ11_RS11110 PF06736 Protein of unknown function (DUF1211) DQQ11_RS11130 PF00884 Sulfatase DQQ11_RS11135 PF03009 Glycerophosphoryl diester phosphodiesterase family DQQ11_RS11145 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQQ11_RS11155 PF00746 LPXTG cell wall anchor motif DQQ11_RS11155 PF17961 Bacterial Ig domain DQQ11_RS11155 PF05737 Collagen binding domain DQQ11_RS11160 PF03976 Polyphosphate kinase 2 (PPK2) DQQ11_RS11165 PF00881 Nitroreductase family DQQ11_RS11170 PF01156 Inosine-uridine preferring nucleoside hydrolase DQQ11_RS11175 PF00075 RNase H DQQ11_RS11180 PF06800 Sugar transport protein DQQ11_RS11190 PF04055 Radical SAM superfamily DQQ11_RS11195 PF08220 DeoR-like helix-turn-helix domain DQQ11_RS11195 PF00455 DeoR C terminal sensor domain DQQ11_RS11200 PF02901 Pyruvate formate lyase-like DQQ11_RS11200 PF01228 Glycine radical DQQ11_RS11205 PF04198 Putative sugar-binding domain DQQ11_RS11205 PF13936 Helix-turn-helix domain DQQ11_RS11210 PF00923 Transaldolase/Fructose-6-phosphate aldolase DQQ11_RS11215 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DQQ11_RS11220 PF00356 Bacterial regulatory proteins, lacI family DQQ11_RS11220 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DQQ11_RS11225 PF01380 SIS domain DQQ11_RS11225 PF01418 Helix-turn-helix domain, rpiR family DQQ11_RS11230 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DQQ11_RS11230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DQQ11_RS11235 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DQQ11_RS11235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DQQ11_RS11240 PF00999 Sodium/hydrogen exchanger family DQQ11_RS11245 PF02779 Transketolase, pyrimidine binding domain DQQ11_RS11245 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DQQ11_RS11245 PF02780 Transketolase, C-terminal domain DQQ11_RS11250 PF00857 Isochorismatase family DQQ11_RS11260 PF00005 ABC transporter DQQ11_RS11265 PF00392 Bacterial regulatory proteins, gntR family DQQ11_RS11305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DQQ11_RS11305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DQQ11_RS11305 PF00205 Thiamine pyrophosphate enzyme, central domain DQQ11_RS11315 PF00326 Prolyl oligopeptidase family DQQ11_RS11320 PF00085 Thioredoxin DQQ11_RS11325 PF01053 Cys/Met metabolism PLP-dependent enzyme DQQ11_RS11355 PF10437 Bacterial lipoate protein ligase C-terminus DQQ11_RS11355 PF03099 Biotin/lipoate A/B protein ligase family DQQ11_RS11360 PF13457 GW (Gly-Tryp) dipeptide domain DQQ11_RS11360 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DQQ11_RS11370 PF03613 PTS system mannose/fructose/sorbose family IID component DQQ11_RS11375 PF03609 PTS system sorbose-specific iic component DQQ11_RS11380 PF03830 PTS system sorbose subfamily IIB component DQQ11_RS11385 PF07702 UTRA domain DQQ11_RS11385 PF00392 Bacterial regulatory proteins, gntR family DQQ11_RS11390 PF00582 Universal stress protein family DQQ11_RS11395 PF01479 S4 domain DQQ11_RS11395 PF00849 RNA pseudouridylate synthase DQQ11_RS11400 PF01381 Helix-turn-helix DQQ11_RS11400 PF08671 Anti-repressor SinI DQQ11_RS11410 PF00534 Glycosyl transferases group 1 DQQ11_RS11415 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase DQQ11_RS11415 PF09364 XFP N-terminal domain DQQ11_RS11415 PF09363 XFP C-terminal domain DQQ11_RS11420 PF00756 Putative esterase DQQ11_RS11425 PF07702 UTRA domain DQQ11_RS11425 PF00392 Bacterial regulatory proteins, gntR family DQQ11_RS11430 PF04073 Aminoacyl-tRNA editing domain DQQ11_RS11440 PF01966 HD domain DQQ11_RS11470 PF01595 Cyclin M transmembrane N-terminal domain DQQ11_RS11470 PF03471 Transporter associated domain DQQ11_RS11470 PF00571 CBS domain DQQ11_RS11475 PF07972 NrdI Flavodoxin like DQQ11_RS11480 PF00999 Sodium/hydrogen exchanger family DQQ11_RS11485 PF07690 Major Facilitator Superfamily DQQ11_RS11490 PF07739 TipAS antibiotic-recognition domain DQQ11_RS11490 PF13411 MerR HTH family regulatory protein DQQ11_RS11495 PF08240 Alcohol dehydrogenase GroES-like domain DQQ11_RS11495 PF00107 Zinc-binding dehydrogenase DQQ11_RS11505 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DQQ11_RS11505 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DQQ11_RS11515 PF00155 Aminotransferase class I and II DQQ11_RS11515 PF00392 Bacterial regulatory proteins, gntR family DQQ11_RS11520 PF00155 Aminotransferase class I and II DQQ11_RS11540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQQ11_RS11540 PF03466 LysR substrate binding domain DQQ11_RS11545 PF13460 NAD(P)H-binding DQQ11_RS11560 PF13361 UvrD-like helicase C-terminal domain DQQ11_RS11560 PF00580 UvrD/REP helicase N-terminal domain DQQ11_RS11560 PF12705 PD-(D/E)XK nuclease superfamily DQQ11_RS11565 PF12705 PD-(D/E)XK nuclease superfamily DQQ11_RS11575 PF00156 Phosphoribosyl transferase domain DQQ11_RS11580 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DQQ11_RS11585 PF01180 Dihydroorotate dehydrogenase DQQ11_RS11590 PF02142 MGS-like domain DQQ11_RS11590 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DQQ11_RS11590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DQQ11_RS11595 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DQQ11_RS11595 PF00117 Glutamine amidotransferase class-I DQQ11_RS11600 PF01979 Amidohydrolase family DQQ11_RS11605 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DQQ11_RS11605 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DQQ11_RS11610 PF00156 Phosphoribosyl transferase domain DQQ11_RS11615 PF17853 GGDEF-like domain DQQ11_RS11615 PF07905 Purine catabolism regulatory protein-like family DQQ11_RS11615 PF13556 PucR C-terminal helix-turn-helix domain DQQ11_RS11620 PF00860 Permease family DQQ11_RS11625 PF00860 Permease family DQQ11_RS11645 PF00535 Glycosyl transferase family 2 DQQ11_RS11655 PF02843 Phosphoribosylglycinamide synthetase, C domain DQQ11_RS11655 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DQQ11_RS11655 PF02844 Phosphoribosylglycinamide synthetase, N domain DQQ11_RS11660 PF01808 AICARFT/IMPCHase bienzyme DQQ11_RS11660 PF02142 MGS-like domain DQQ11_RS11665 PF00551 Formyl transferase DQQ11_RS11670 PF00586 AIR synthase related protein, N-terminal domain DQQ11_RS11670 PF02769 AIR synthase related protein, C-terminal domain DQQ11_RS11675 PF13537 Glutamine amidotransferase domain DQQ11_RS11675 PF00156 Phosphoribosyl transferase domain DQQ11_RS11690 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DQQ11_RS11695 PF01259 SAICAR synthetase DQQ11_RS11700 PF02222 ATP-grasp domain DQQ11_RS11700 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DQQ11_RS11705 PF00731 AIR carboxylase DQQ11_RS11710 PF03358 NADPH-dependent FMN reductase DQQ11_RS11710 PF04205 FMN-binding domain DQQ11_RS11710 PF00890 FAD binding domain DQQ11_RS11715 PF03358 NADPH-dependent FMN reductase DQQ11_RS11715 PF04205 FMN-binding domain DQQ11_RS11715 PF00890 FAD binding domain DQQ11_RS11720 PF03099 Biotin/lipoate A/B protein ligase family DQQ11_RS11720 PF10437 Bacterial lipoate protein ligase C-terminus DQQ11_RS11725 PF13350 Tyrosine phosphatase family DQQ11_RS11740 PF17763 Glutaminase/Asparaginase C-terminal domain DQQ11_RS11740 PF00710 Asparaginase, N-terminal DQQ11_RS11745 PF00005 ABC transporter DQQ11_RS11760 PF00392 Bacterial regulatory proteins, gntR family DQQ11_RS11765 PF00005 ABC transporter DQQ11_RS11775 PF00582 Universal stress protein family DQQ11_RS11785 PF04138 GtrA-like protein DQQ11_RS11805 PF00155 Aminotransferase class I and II DQQ11_RS11825 PF00128 Alpha amylase, catalytic domain DQQ11_RS11825 PF02903 Alpha amylase, N-terminal ig-like domain DQQ11_RS11830 PF14821 Threonine synthase N terminus DQQ11_RS11830 PF00291 Pyridoxal-phosphate dependent enzyme DQQ11_RS11845 PF00132 Bacterial transferase hexapeptide (six repeats) DQQ11_RS11845 PF12464 Maltose acetyltransferase DQQ11_RS11850 PF00293 NUDIX domain DQQ11_RS11885 PF02829 3H domain DQQ11_RS11885 PF08279 HTH domain DQQ11_RS11890 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DQQ11_RS11890 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DQQ11_RS11890 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DQQ11_RS11895 PF00440 Bacterial regulatory proteins, tetR family DQQ11_RS11905 PF00005 ABC transporter DQQ11_RS11910 PF00291 Pyridoxal-phosphate dependent enzyme DQQ11_RS11915 PF00232 Glycosyl hydrolase family 1 DQQ11_RS11920 PF00232 Glycosyl hydrolase family 1 DQQ11_RS11925 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DQQ11_RS11930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQQ11_RS11935 PF00392 Bacterial regulatory proteins, gntR family DQQ11_RS11935 PF07702 UTRA domain DQQ11_RS11940 PF00535 Glycosyl transferase family 2 DQQ11_RS11945 PF00300 Histidine phosphatase superfamily (branch 1) DQQ11_RS11960 PF08546 Ketopantoate reductase PanE/ApbA C terminal DQQ11_RS11960 PF02558 Ketopantoate reductase PanE/ApbA DQQ11_RS11965 PF00892 EamA-like transporter family DQQ11_RS11970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DQQ11_RS11985 PF00258 Flavodoxin DQQ11_RS12005 PF01487 Type I 3-dehydroquinase DQQ11_RS12010 PF13520 Amino acid permease DQQ11_RS12020 PF00248 Aldo/keto reductase family DQQ11_RS12025 PF00248 Aldo/keto reductase family DQQ11_RS12055 PF07155 ECF-type riboflavin transporter, S component DQQ11_RS12060 PF01479 S4 domain DQQ11_RS12060 PF00579 tRNA synthetases class I (W and Y) DQQ11_RS12075 PF13529 Peptidase_C39 like family DQQ11_RS12095 PF04474 Protein of unknown function (DUF554) DQQ11_RS12100 PF06445 GyrI-like small molecule binding domain DQQ11_RS12100 PF13411 MerR HTH family regulatory protein DQQ11_RS12105 PF00375 Sodium:dicarboxylate symporter family DQQ11_RS12115 PF02687 FtsX-like permease family DQQ11_RS12120 PF00005 ABC transporter DQQ11_RS12130 PF01156 Inosine-uridine preferring nucleoside hydrolase DQQ11_RS12140 PF00999 Sodium/hydrogen exchanger family DQQ11_RS12155 PF00206 Lyase DQQ11_RS12155 PF10415 Fumarase C C-terminus DQQ11_RS12160 PF07690 Major Facilitator Superfamily DQQ11_RS12170 PF07690 Major Facilitator Superfamily DQQ11_RS12180 PF13302 Acetyltransferase (GNAT) domain DQQ11_RS12185 PF03601 Conserved hypothetical protein 698 DQQ11_RS12190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQQ11_RS12190 PF03466 LysR substrate binding domain DQQ11_RS12195 PF00534 Glycosyl transferases group 1 DQQ11_RS12195 PF13439 Glycosyltransferase Family 4 DQQ11_RS12200 PF13439 Glycosyltransferase Family 4 DQQ11_RS12215 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DQQ11_RS12215 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DQQ11_RS12225 PF13732 Domain of unknown function (DUF4162) DQQ11_RS12225 PF00005 ABC transporter DQQ11_RS12235 PF00106 short chain dehydrogenase DQQ11_RS12250 PF13411 MerR HTH family regulatory protein DQQ11_RS12255 PF01546 Peptidase family M20/M25/M40 DQQ11_RS12255 PF07687 Peptidase dimerisation domain DQQ11_RS12265 PF00005 ABC transporter DQQ11_RS12270 PF00730 HhH-GPD superfamily base excision DNA repair protein DQQ11_RS12270 PF00633 Helix-hairpin-helix motif DQQ11_RS12275 PF12464 Maltose acetyltransferase DQQ11_RS12275 PF14602 Hexapeptide repeat of succinyl-transferase DQQ11_RS12280 PF10502 Signal peptidase, peptidase S26 DQQ11_RS12295 PF00583 Acetyltransferase (GNAT) family DQQ11_RS12320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQQ11_RS12320 PF03466 LysR substrate binding domain DQQ11_RS12330 PF00107 Zinc-binding dehydrogenase DQQ11_RS12330 PF08240 Alcohol dehydrogenase GroES-like domain DQQ11_RS12340 PF00248 Aldo/keto reductase family DQQ11_RS12345 PF06736 Protein of unknown function (DUF1211) DQQ11_RS12360 PF06800 Sugar transport protein DQQ11_RS12370 PF00248 Aldo/keto reductase family DQQ11_RS12375 PF03466 LysR substrate binding domain DQQ11_RS12375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQQ11_RS12395 PF00106 short chain dehydrogenase DQQ11_RS12400 PF00248 Aldo/keto reductase family DQQ11_RS12405 PF00248 Aldo/keto reductase family DQQ11_RS12410 PF07690 Major Facilitator Superfamily DQQ11_RS12420 PF00582 Universal stress protein family DQQ11_RS12425 PF14602 Hexapeptide repeat of succinyl-transferase DQQ11_RS12425 PF12464 Maltose acetyltransferase DQQ11_RS12430 PF13419 Haloacid dehalogenase-like hydrolase DQQ11_RS12445 PF00155 Aminotransferase class I and II DQQ11_RS12455 PF00248 Aldo/keto reductase family DQQ11_RS12460 PF00005 ABC transporter DQQ11_RS12460 PF00664 ABC transporter transmembrane region DQQ11_RS12465 PF00005 ABC transporter DQQ11_RS12465 PF00664 ABC transporter transmembrane region DQQ11_RS12470 PF07690 Major Facilitator Superfamily DQQ11_RS12495 PF01022 Bacterial regulatory protein, arsR family DQQ11_RS12500 PF01223 DNA/RNA non-specific endonuclease DQQ11_RS12520 PF00005 ABC transporter DQQ11_RS12520 PF12848 ABC transporter DQQ11_RS12535 PF00005 ABC transporter DQQ11_RS12535 PF17760 UvrA interaction domain DQQ11_RS12535 PF17755 UvrA DNA-binding domain DQQ11_RS12550 PF11700 Vacuole effluxer Atg22 like DQQ11_RS12585 PF00990 Diguanylate cyclase, GGDEF domain DQQ11_RS12590 PF12792 CSS motif domain associated with EAL DQQ11_RS12590 PF00563 EAL domain DQQ11_RS12600 PF03477 ATP cone domain DQQ11_RS12600 PF13597 Anaerobic ribonucleoside-triphosphate reductase DQQ11_RS12610 PF01327 Polypeptide deformylase DQQ11_RS12615 PF02424 ApbE family DQQ11_RS12620 PF01207 Dihydrouridine synthase (Dus) DQQ11_RS12640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQQ11_RS12640 PF03466 LysR substrate binding domain DQQ11_RS12645 PF00939 Sodium:sulfate symporter transmembrane region DQQ11_RS12650 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DQQ11_RS12710 PF00892 EamA-like transporter family DQQ11_RS12735 PF00480 ROK family DQQ11_RS12740 PF00005 ABC transporter DQQ11_RS12740 PF00664 ABC transporter transmembrane region DQQ11_RS12750 PF00881 Nitroreductase family DQQ11_RS12755 PF02378 Phosphotransferase system, EIIC DQQ11_RS12755 PF00367 phosphotransferase system, EIIB DQQ11_RS12755 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQQ11_RS12760 PF00005 ABC transporter DQQ11_RS12765 PF02653 Branched-chain amino acid transport system / permease component DQQ11_RS12795 PF01743 Poly A polymerase head domain DQQ11_RS12795 PF02272 DHHA1 domain DQQ11_RS12795 PF01368 DHH family DQQ11_RS12795 PF00571 CBS domain DQQ11_RS12795 PF12627 Probable RNA and SrmB- binding site of polymerase A DQQ11_RS12800 PF00005 ABC transporter DQQ11_RS12805 PF12399 Branched-chain amino acid ATP-binding cassette transporter DQQ11_RS12805 PF00005 ABC transporter DQQ11_RS12810 PF02653 Branched-chain amino acid transport system / permease component DQQ11_RS12810 PF11862 Domain of unknown function (DUF3382) DQQ11_RS12815 PF02653 Branched-chain amino acid transport system / permease component DQQ11_RS12820 PF13458 Periplasmic binding protein DQQ11_RS12830 PF00413 Matrixin DQQ11_RS12835 PF04138 GtrA-like protein DQQ11_RS12845 PF01566 Natural resistance-associated macrophage protein DQQ11_RS12865 PF01022 Bacterial regulatory protein, arsR family DQQ11_RS12910 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQQ11_RS12915 PF02378 Phosphotransferase system, EIIC DQQ11_RS12920 PF00232 Glycosyl hydrolase family 1 DQQ11_RS12930 PF13411 MerR HTH family regulatory protein DQQ11_RS12935 PF06737 Transglycosylase-like domain DQQ11_RS12940 PF01464 Transglycosylase SLT domain DQQ11_RS12955 PF01297 Zinc-uptake complex component A periplasmic DQQ11_RS12970 PF00990 Diguanylate cyclase, GGDEF domain DQQ11_RS12980 PF11799 impB/mucB/samB family C-terminal domain DQQ11_RS12980 PF11798 IMS family HHH motif DQQ11_RS12980 PF00817 impB/mucB/samB family DQQ11_RS12985 PF03466 LysR substrate binding domain DQQ11_RS12985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQQ11_RS12995 PF00106 short chain dehydrogenase DQQ11_RS13040 PF00664 ABC transporter transmembrane region DQQ11_RS13040 PF00005 ABC transporter DQQ11_RS13045 PF00005 ABC transporter DQQ11_RS13045 PF00664 ABC transporter transmembrane region DQQ11_RS13055 PF01546 Peptidase family M20/M25/M40 DQQ11_RS13055 PF07687 Peptidase dimerisation domain DQQ11_RS13075 PF13520 Amino acid permease DQQ11_RS13085 PF00465 Iron-containing alcohol dehydrogenase DQQ11_RS13100 PF00107 Zinc-binding dehydrogenase DQQ11_RS13100 PF08240 Alcohol dehydrogenase GroES-like domain DQQ11_RS13105 PF00403 Heavy-metal-associated domain DQQ11_RS13145 PF13936 Helix-turn-helix domain DQQ11_RS13175 PF08240 Alcohol dehydrogenase GroES-like domain DQQ11_RS13175 PF00107 Zinc-binding dehydrogenase DQQ11_RS13205 PF06458 MucBP domain DQQ11_RS13215 PF13419 Haloacid dehalogenase-like hydrolase DQQ11_RS13220 PF01638 HxlR-like helix-turn-helix DQQ11_RS13225 PF07690 Major Facilitator Superfamily DQQ11_RS13235 PF13537 Glutamine amidotransferase domain DQQ11_RS13235 PF00733 Asparagine synthase DQQ11_RS13240 PF04397 LytTr DNA-binding domain DQQ11_RS13240 PF00072 Response regulator receiver domain DQQ11_RS13255 PF00440 Bacterial regulatory proteins, tetR family DQQ11_RS13255 PF08359 YsiA-like protein, C-terminal region DQQ11_RS13265 PF00171 Aldehyde dehydrogenase family DQQ11_RS13280 PF01638 HxlR-like helix-turn-helix DQQ11_RS13285 PF13936 Helix-turn-helix domain DQQ11_RS13290 PF00106 short chain dehydrogenase DQQ11_RS13305 PF06736 Protein of unknown function (DUF1211) DQQ11_RS13310 PF00248 Aldo/keto reductase family DQQ11_RS13325 PF07690 Major Facilitator Superfamily DQQ11_RS13335 PF01497 Periplasmic binding protein DQQ11_RS13340 PF00005 ABC transporter DQQ11_RS13345 PF01032 FecCD transport family DQQ11_RS13350 PF01032 FecCD transport family DQQ11_RS13355 PF00440 Bacterial regulatory proteins, tetR family DQQ11_RS13365 PF00106 short chain dehydrogenase DQQ11_RS13370 PF14602 Hexapeptide repeat of succinyl-transferase DQQ11_RS13370 PF12464 Maltose acetyltransferase DQQ11_RS13400 PF06458 MucBP domain DQQ11_RS13415 PF00679 Elongation factor G C-terminus DQQ11_RS13415 PF00009 Elongation factor Tu GTP binding domain DQQ11_RS13415 PF06421 GTP-binding protein LepA C-terminus DQQ11_RS13425 PF00293 NUDIX domain DQQ11_RS13425 PF09297 NADH pyrophosphatase zinc ribbon domain DQQ11_RS13435 PF00890 FAD binding domain DQQ11_RS13435 PF14537 Cytochrome c3 DQQ11_RS13445 PF00210 Ferritin-like domain DQQ11_RS13455 PF00232 Glycosyl hydrolase family 1 DQQ11_RS13460 PF02378 Phosphotransferase system, EIIC DQQ11_RS13480 PF13411 MerR HTH family regulatory protein DQQ11_RS13500 PF01965 DJ-1/PfpI family DQQ11_RS13525 PF00005 ABC transporter DQQ11_RS13525 PF12704 MacB-like periplasmic core domain DQQ11_RS13525 PF02687 FtsX-like permease family DQQ11_RS13535 PF02615 Malate/L-lactate dehydrogenase DQQ11_RS13555 PF03734 L,D-transpeptidase catalytic domain DQQ11_RS13560 PF00248 Aldo/keto reductase family DQQ11_RS13570 PF13577 SnoaL-like domain DQQ11_RS13575 PF07690 Major Facilitator Superfamily DQQ11_RS13600 PF00300 Histidine phosphatase superfamily (branch 1) DQQ11_RS13605 PF01594 AI-2E family transporter DQQ11_RS13610 PF00480 ROK family DQQ11_RS13630 PF00069 Protein kinase domain DQQ11_RS13630 PF03793 PASTA domain DQQ11_RS13670 PF00583 Acetyltransferase (GNAT) family DQQ11_RS13675 PF07943 Penicillin-binding protein 5, C-terminal domain DQQ11_RS13675 PF00768 D-alanyl-D-alanine carboxypeptidase DQQ11_RS13680 PF00512 His Kinase A (phospho-acceptor) domain DQQ11_RS13680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQQ11_RS13685 PF00486 Transcriptional regulatory protein, C terminal DQQ11_RS13685 PF00072 Response regulator receiver domain DQQ11_RS13700 PF00571 CBS domain DQQ11_RS13700 PF00478 IMP dehydrogenase / GMP reductase domain DQQ11_RS13710 PF01926 50S ribosome-binding GTPase DQQ11_RS13710 PF06071 Protein of unknown function (DUF933) DQQ11_RS13715 PF06107 Bacterial protein of unknown function (DUF951) DQQ11_RS13720 PF02195 ParB-like nuclease domain DQQ11_RS13720 PF17762 HTH domain found in ParB protein DQQ11_RS13725 PF13614 AAA domain DQQ11_RS13730 PF17762 HTH domain found in ParB protein DQQ11_RS13730 PF02195 ParB-like nuclease domain DQQ11_RS13735 PF02527 rRNA small subunit methyltransferase G DQQ11_RS13740 PF01773 Na+ dependent nucleoside transporter N-terminus DQQ11_RS13740 PF07662 Na+ dependent nucleoside transporter C-terminus DQQ11_RS13755 PF03466 LysR substrate binding domain DQQ11_RS13755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQQ11_RS13760 PF00155 Aminotransferase class I and II DQQ11_RS13765 PF00497 Bacterial extracellular solute-binding proteins, family 3 DQQ11_RS13770 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS13775 PF00005 ABC transporter DQQ11_RS13780 PF00497 Bacterial extracellular solute-binding proteins, family 3 DQQ11_RS13805 PF00367 phosphotransferase system, EIIB DQQ11_RS13805 PF02378 Phosphotransferase system, EIIC DQQ11_RS13805 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQQ11_RS13810 PF00128 Alpha amylase, catalytic domain DQQ11_RS13815 PF00356 Bacterial regulatory proteins, lacI family DQQ11_RS13830 PF03649 Uncharacterised protein family (UPF0014) DQQ11_RS13835 PF00005 ABC transporter DQQ11_RS13840 PF01938 TRAM domain DQQ11_RS13840 PF05958 tRNA (Uracil-5-)-methyltransferase DQQ11_RS13860 PF00480 ROK family DQQ11_RS13865 PF01074 Glycosyl hydrolases family 38 N-terminal domain DQQ11_RS13865 PF07748 Glycosyl hydrolases family 38 C-terminal domain DQQ11_RS13865 PF09261 Alpha mannosidase middle domain DQQ11_RS13870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DQQ11_RS13870 PF02378 Phosphotransferase system, EIIC DQQ11_RS13870 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQQ11_RS13875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQQ11_RS13880 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQQ11_RS13880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DQQ11_RS13885 PF05043 Mga helix-turn-helix domain DQQ11_RS13885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DQQ11_RS13885 PF08279 HTH domain DQQ11_RS13885 PF00874 PRD domain DQQ11_RS13900 PF00367 phosphotransferase system, EIIB DQQ11_RS13900 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQQ11_RS13900 PF02378 Phosphotransferase system, EIIC DQQ11_RS13930 PF01475 Ferric uptake regulator family DQQ11_RS13935 PF08951 Enterocin A Immunity DQQ11_RS13955 PF03788 LrgA family DQQ11_RS13960 PF04172 LrgB-like family DQQ11_RS13965 PF02645 Uncharacterised protein, DegV family COG1307 DQQ11_RS13975 PF04298 Putative neutral zinc metallopeptidase DQQ11_RS13980 PF01593 Flavin containing amine oxidoreductase DQQ11_RS13995 PF02595 Glycerate kinase family DQQ11_RS14000 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQQ11_RS14000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DQQ11_RS14010 PF10397 Adenylosuccinate lyase C-terminus DQQ11_RS14010 PF00206 Lyase DQQ11_RS14015 PF00709 Adenylosuccinate synthetase DQQ11_RS14020 PF00478 IMP dehydrogenase / GMP reductase domain DQQ11_RS14025 PF13350 Tyrosine phosphatase family DQQ11_RS14030 PF13396 Phospholipase_D-nuclease N-terminal DQQ11_RS14030 PF13091 PLD-like domain DQQ11_RS14040 PF13520 Amino acid permease DQQ11_RS14045 PF02705 K+ potassium transporter DQQ11_RS14050 PF16916 Dimerisation domain of Zinc Transporter DQQ11_RS14050 PF01545 Cation efflux family DQQ11_RS14055 PF01594 AI-2E family transporter DQQ11_RS14060 PF01717 Cobalamin-independent synthase, Catalytic domain DQQ11_RS14065 PF00893 Small Multidrug Resistance protein DQQ11_RS14070 PF00893 Small Multidrug Resistance protein DQQ11_RS14075 PF03006 Haemolysin-III related DQQ11_RS14080 PF01022 Bacterial regulatory protein, arsR family DQQ11_RS14085 PF01545 Cation efflux family DQQ11_RS14110 PF00809 Pterin binding enzyme DQQ11_RS14115 PF01725 Ham1 family DQQ11_RS14120 PF08245 Mur ligase middle domain DQQ11_RS14120 PF02875 Mur ligase family, glutamate ligase domain DQQ11_RS14125 PF01227 GTP cyclohydrolase I DQQ11_RS14130 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DQQ11_RS14150 PF01297 Zinc-uptake complex component A periplasmic DQQ11_RS14155 PF07690 Major Facilitator Superfamily DQQ11_RS14185 PF00144 Beta-lactamase DQQ11_RS14190 PF02901 Pyruvate formate lyase-like DQQ11_RS14190 PF01228 Glycine radical DQQ11_RS14195 PF04055 Radical SAM superfamily DQQ11_RS14205 PF01883 Iron-sulfur cluster assembly protein DQQ11_RS14210 PF00248 Aldo/keto reductase family DQQ11_RS14240 PF02028 BCCT, betaine/carnitine/choline family transporter DQQ11_RS14245 PF00403 Heavy-metal-associated domain DQQ11_RS14255 PF04237 YjbR DQQ11_RS14265 PF01979 Amidohydrolase family DQQ11_RS14265 PF13382 Adenine deaminase C-terminal domain DQQ11_RS14270 PF01380 SIS domain DQQ11_RS14285 PF03553 Na+/H+ antiporter family DQQ11_RS14290 PF00324 Amino acid permease DQQ11_RS14300 PF04608 Phosphatidylglycerophosphatase A DQQ11_RS14315 PF03960 ArsC family DQQ11_RS14320 PF04343 Protein of unknown function, DUF488 DQQ11_RS14330 PF14815 NUDIX domain DQQ11_RS14330 PF00730 HhH-GPD superfamily base excision DNA repair protein DQQ11_RS14345 PF00011 Hsp20/alpha crystallin family DQQ11_RS14365 PF00892 EamA-like transporter family DQQ11_RS14380 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DQQ11_RS14390 PF03965 Penicillinase repressor DQQ11_RS14405 PF07690 Major Facilitator Superfamily DQQ11_RS14430 PF00083 Sugar (and other) transporter DQQ11_RS14430 PF07690 Major Facilitator Superfamily DQQ11_RS14460 PF00690 Cation transporter/ATPase, N-terminus DQQ11_RS14460 PF00689 Cation transporting ATPase, C-terminus DQQ11_RS14465 PF00149 Calcineurin-like phosphoesterase DQQ11_RS14465 PF02872 5'-nucleotidase, C-terminal domain DQQ11_RS14475 PF00248 Aldo/keto reductase family DQQ11_RS14495 PF02673 Bacitracin resistance protein BacA DQQ11_RS14500 PF01661 Macro domain DQQ11_RS14535 PF12833 Helix-turn-helix domain DQQ11_RS14560 PF00282 Pyridoxal-dependent decarboxylase conserved domain DQQ11_RS14565 PF00877 NlpC/P60 family DQQ11_RS14630 PF01209 ubiE/COQ5 methyltransferase family DQQ11_RS14650 PF00403 Heavy-metal-associated domain DQQ11_RS14655 PF00230 Major intrinsic protein DQQ11_RS14660 PF00085 Thioredoxin DQQ11_RS14665 PF02583 Metal-sensitive transcriptional repressor DQQ11_RS14685 PF00027 Cyclic nucleotide-binding domain DQQ11_RS14685 PF13545 Crp-like helix-turn-helix domain DQQ11_RS14690 PF05649 Peptidase family M13 DQQ11_RS14690 PF01431 Peptidase family M13 DQQ11_RS14715 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQQ11_RS14715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DQQ11_RS14765 PF00230 Major intrinsic protein DQQ11_RS14770 PF03109 ABC1 family DQQ11_RS14780 PF05525 Branched-chain amino acid transport protein DQQ11_RS14785 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQQ11_RS14790 PF02449 Beta-galactosidase DQQ11_RS14790 PF08533 Beta-galactosidase C-terminal domain DQQ11_RS14790 PF08532 Beta-galactosidase trimerisation domain DQQ11_RS14795 PF00356 Bacterial regulatory proteins, lacI family DQQ11_RS14805 PF07690 Major Facilitator Superfamily DQQ11_RS14825 PF02661 Fic/DOC family DQQ11_RS14825 PF18543 Intracellular delivery domain DQQ11_RS14830 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA DQQ11_RS14840 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DQQ11_RS14840 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DQQ11_RS14845 PF16363 GDP-mannose 4,6 dehydratase DQQ11_RS14850 PF00288 GHMP kinases N terminal domain DQQ11_RS14850 PF10509 Galactokinase galactose-binding signature DQQ11_RS14850 PF08544 GHMP kinases C terminal DQQ11_RS14855 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DQQ11_RS14855 PF02837 Glycosyl hydrolases family 2, sugar binding domain DQQ11_RS14855 PF00703 Glycosyl hydrolases family 2 DQQ11_RS14860 PF02929 Beta galactosidase small chain DQQ11_RS14865 PF16875 Glycosyl hydrolase family 36 N-terminal domain DQQ11_RS14865 PF16874 Glycosyl hydrolase family 36 C-terminal domain DQQ11_RS14870 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQQ11_RS14875 PF01263 Aldose 1-epimerase DQQ11_RS14880 PF00356 Bacterial regulatory proteins, lacI family DQQ11_RS14885 PF00248 Aldo/keto reductase family DQQ11_RS14895 PF04205 FMN-binding domain DQQ11_RS14895 PF03358 NADPH-dependent FMN reductase DQQ11_RS14895 PF00890 FAD binding domain DQQ11_RS14900 PF02424 ApbE family DQQ11_RS14905 PF01487 Type I 3-dehydroquinase DQQ11_RS14910 PF07690 Major Facilitator Superfamily DQQ11_RS14915 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DQQ11_RS14915 PF08501 Shikimate dehydrogenase substrate binding domain DQQ11_RS14920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DQQ11_RS14920 PF03466 LysR substrate binding domain DQQ11_RS14925 PF07690 Major Facilitator Superfamily DQQ11_RS14935 PF12697 Alpha/beta hydrolase family DQQ11_RS14940 PF00392 Bacterial regulatory proteins, gntR family DQQ11_RS14940 PF07702 UTRA domain DQQ11_RS14945 PF02378 Phosphotransferase system, EIIC DQQ11_RS14950 PF13580 SIS domain DQQ11_RS14955 PF01869 BadF/BadG/BcrA/BcrD ATPase family DQQ11_RS14965 PF00232 Glycosyl hydrolase family 1 DQQ11_RS14970 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQQ11_RS14970 PF00367 phosphotransferase system, EIIB DQQ11_RS14970 PF02378 Phosphotransferase system, EIIC DQQ11_RS14975 PF03123 CAT RNA binding domain DQQ11_RS14975 PF00874 PRD domain DQQ11_RS14980 PF00232 Glycosyl hydrolase family 1 DQQ11_RS14985 PF00232 Glycosyl hydrolase family 1 DQQ11_RS14990 PF02378 Phosphotransferase system, EIIC DQQ11_RS14990 PF00367 phosphotransferase system, EIIB DQQ11_RS14990 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DQQ11_RS15000 PF03632 Glycosyl hydrolase family 65 central catalytic domain DQQ11_RS15000 PF03633 Glycosyl hydrolase family 65, C-terminal domain DQQ11_RS15000 PF03636 Glycosyl hydrolase family 65, N-terminal domain DQQ11_RS15005 PF00356 Bacterial regulatory proteins, lacI family DQQ11_RS15015 PF01055 Glycosyl hydrolases family 31 DQQ11_RS15015 PF16338 Domain of unknown function (DUF4968) DQQ11_RS15015 PF13802 Galactose mutarotase-like DQQ11_RS15015 PF17137 Domain of unknown function (DUF5110) DQQ11_RS15025 PF13936 Helix-turn-helix domain DQQ11_RS15035 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DQQ11_RS15045 PF00456 Transketolase, thiamine diphosphate binding domain DQQ11_RS15045 PF02780 Transketolase, C-terminal domain DQQ11_RS15045 PF02779 Transketolase, pyrimidine binding domain DQQ11_RS15050 PF00923 Transaldolase/Fructose-6-phosphate aldolase DQQ11_RS15055 PF03611 PTS system sugar-specific permease component DQQ11_RS15070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DQQ11_RS15070 PF00874 PRD domain DQQ11_RS15070 PF05043 Mga helix-turn-helix domain DQQ11_RS15070 PF08279 HTH domain DQQ11_RS15070 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQQ11_RS15080 PF08240 Alcohol dehydrogenase GroES-like domain DQQ11_RS15080 PF00107 Zinc-binding dehydrogenase DQQ11_RS15085 PF03611 PTS system sugar-specific permease component DQQ11_RS15090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DQQ11_RS15100 PF08220 DeoR-like helix-turn-helix domain DQQ11_RS15100 PF00455 DeoR C terminal sensor domain DQQ11_RS15105 PF09363 XFP C-terminal domain DQQ11_RS15105 PF09364 XFP N-terminal domain DQQ11_RS15105 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase DQQ11_RS15115 PF12464 Maltose acetyltransferase DQQ11_RS15115 PF14602 Hexapeptide repeat of succinyl-transferase DQQ11_RS15120 PF02610 L-arabinose isomerase DQQ11_RS15120 PF11762 L-arabinose isomerase C-terminal domain DQQ11_RS15125 PF00596 Class II Aldolase and Adducin N-terminal domain DQQ11_RS15135 PF00083 Sugar (and other) transporter DQQ11_RS15140 PF00392 Bacterial regulatory proteins, gntR family DQQ11_RS15145 PF01380 SIS domain DQQ11_RS15145 PF01418 Helix-turn-helix domain, rpiR family DQQ11_RS15165 PF00474 Sodium:solute symporter family DQQ11_RS15170 PF00999 Sodium/hydrogen exchanger family DQQ11_RS15180 PF00480 ROK family DQQ11_RS15185 PF00701 Dihydrodipicolinate synthetase family DQQ11_RS15190 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DQQ11_RS15195 PF07992 Pyridine nucleotide-disulphide oxidoreductase DQQ11_RS15195 PF14759 Reductase C-terminal DQQ11_RS15220 PF04226 Transglycosylase associated protein DQQ11_RS15230 PF03960 ArsC family DQQ11_RS15235 PF04397 LytTr DNA-binding domain DQQ11_RS15235 PF00072 Response regulator receiver domain DQQ11_RS15250 PF04647 Accessory gene regulator B DQQ11_RS15255 PF07724 AAA domain (Cdc48 subfamily) DQQ11_RS15255 PF17871 AAA lid domain DQQ11_RS15255 PF00004 ATPase family associated with various cellular activities (AAA) DQQ11_RS15255 PF10431 C-terminal, D2-small domain, of ClpB protein DQQ11_RS15265 PF01070 FMN-dependent dehydrogenase DQQ11_RS15270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DQQ11_RS15270 PF00205 Thiamine pyrophosphate enzyme, central domain DQQ11_RS15270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DQQ11_RS15275 PF02082 Transcriptional regulator DQQ11_RS15280 PF00205 Thiamine pyrophosphate enzyme, central domain DQQ11_RS15280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DQQ11_RS15280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DQQ11_RS15295 PF00596 Class II Aldolase and Adducin N-terminal domain DQQ11_RS15305 PF05336 L-rhamnose mutarotase DQQ11_RS15310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DQQ11_RS15310 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DQQ11_RS15315 PF07690 Major Facilitator Superfamily DQQ11_RS15320 PF17853 GGDEF-like domain DQQ11_RS15320 PF12833 Helix-turn-helix domain DQQ11_RS15325 PF08220 DeoR-like helix-turn-helix domain DQQ11_RS15325 PF00455 DeoR C terminal sensor domain DQQ11_RS15410 PF12833 Helix-turn-helix domain DQQ11_RS15450 PF00232 Glycosyl hydrolase family 1 DQQ11_RS15455 PF00480 ROK family DQQ11_RS15460 PF09261 Alpha mannosidase middle domain DQQ11_RS15460 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain DQQ11_RS15460 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 DQQ11_RS15460 PF07748 Glycosyl hydrolases family 38 C-terminal domain DQQ11_RS15460 PF01074 Glycosyl hydrolases family 38 N-terminal domain DQQ11_RS15470 PF00392 Bacterial regulatory proteins, gntR family DQQ11_RS15470 PF07702 UTRA domain DQQ11_RS15480 PF17912 MalK OB fold domain DQQ11_RS15480 PF00005 ABC transporter DQQ11_RS15480 PF03459 TOBE domain DQQ11_RS15485 PF00480 ROK family DQQ11_RS15490 PF00072 Response regulator receiver domain DQQ11_RS15490 PF12833 Helix-turn-helix domain DQQ11_RS15495 PF00672 HAMP domain DQQ11_RS15495 PF02743 Cache domain DQQ11_RS15495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQQ11_RS15495 PF06580 Histidine kinase DQQ11_RS15505 PF16657 Maltogenic Amylase, C-terminal domain DQQ11_RS15505 PF00128 Alpha amylase, catalytic domain DQQ11_RS15510 PF12010 Domain of unknown function (DUF3502) DQQ11_RS15515 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS15520 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS15530 PF01497 Periplasmic binding protein DQQ11_RS15530 PF12833 Helix-turn-helix domain DQQ11_RS15535 PF00005 ABC transporter DQQ11_RS15535 PF00664 ABC transporter transmembrane region DQQ11_RS15540 PF00005 ABC transporter DQQ11_RS15540 PF00664 ABC transporter transmembrane region DQQ11_RS15545 PF00392 Bacterial regulatory proteins, gntR family DQQ11_RS15545 PF07702 UTRA domain DQQ11_RS15550 PF13556 PucR C-terminal helix-turn-helix domain DQQ11_RS15560 PF03612 Sorbitol phosphotransferase enzyme II N-terminus DQQ11_RS15560 PF07663 Sorbitol phosphotransferase enzyme II C-terminus DQQ11_RS15565 PF03608 PTS system enzyme II sorbitol-specific factor DQQ11_RS15580 PF00106 short chain dehydrogenase DQQ11_RS15585 PF06800 Sugar transport protein DQQ11_RS15590 PF05025 RbsD / FucU transport protein family DQQ11_RS15595 PF00294 pfkB family carbohydrate kinase DQQ11_RS15595 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DQQ11_RS15605 PF00171 Aldehyde dehydrogenase family DQQ11_RS15605 PF00465 Iron-containing alcohol dehydrogenase DQQ11_RS15615 PF03551 Transcriptional regulator PadR-like family DQQ11_RS15615 PF10400 Virulence activator alpha C-term DQQ11_RS15620 PF05870 Phenolic acid decarboxylase (PAD) DQQ11_RS15635 PF02645 Uncharacterised protein, DegV family COG1307 DQQ11_RS15645 PF03051 Peptidase C1-like family DQQ11_RS15650 PF10502 Signal peptidase, peptidase S26 DQQ11_RS15675 PF13932 GidA associated domain DQQ11_RS15675 PF01134 Glucose inhibited division protein A DQQ11_RS15680 PF12631 MnmE helical domain DQQ11_RS15680 PF10396 GTP-binding protein TrmE N-terminus DQQ11_RS15680 PF01926 50S ribosome-binding GTPase DQQ11_RS15685 PF14804 Jag N-terminus DQQ11_RS15685 PF01424 R3H domain DQQ11_RS15690 PF01979 Amidohydrolase family DQQ11_RS15695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DQQ11_RS15700 PF02096 60Kd inner membrane protein DQQ11_RS15705 PF00825 Ribonuclease P DQQ11_RS15710 PF00468 Ribosomal protein L34 DQQ11_RS15715 PF00239 Resolvase, N terminal domain DQQ11_RS15715 PF02796 Helix-turn-helix domain of resolvase DQQ11_RS15720 PF13936 Helix-turn-helix domain DQQ11_RS15735 PF07972 NrdI Flavodoxin like DQQ11_RS15740 PF08343 Ribonucleotide reductase N-terminal DQQ11_RS15740 PF00317 Ribonucleotide reductase, all-alpha domain DQQ11_RS15740 PF02867 Ribonucleotide reductase, barrel domain DQQ11_RS15745 PF00268 Ribonucleotide reductase, small chain DQQ11_RS15750 PF00268 Ribonucleotide reductase, small chain DQQ11_RS15760 PF00239 Resolvase, N terminal domain DQQ11_RS15760 PF02796 Helix-turn-helix domain of resolvase DQQ11_RS15765 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DQQ11_RS15765 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DQQ11_RS15775 PF00999 Sodium/hydrogen exchanger family DQQ11_RS15780 PF00654 Voltage gated chloride channel DQQ11_RS15800 PF01476 LysM domain DQQ11_RS15800 PF05257 CHAP domain DQQ11_RS15805 PF00665 Integrase core domain DQQ11_RS15805 PF13936 Helix-turn-helix domain DQQ11_RS15815 PF00571 CBS domain DQQ11_RS15815 PF00005 ABC transporter DQQ11_RS15820 PF00528 Binding-protein-dependent transport system inner membrane component DQQ11_RS15825 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DQQ11_RS15885 PF01443 Viral (Superfamily 1) RNA helicase DQQ11_RS15885 PF03389 MobA/MobL family DQQ11_RS15885 PF17841 BID domain of Bartonella effector protein (Bep) DQQ11_RS15920 PF11798 IMS family HHH motif DQQ11_RS15920 PF11799 impB/mucB/samB family C-terminal domain DQQ11_RS15920 PF00817 impB/mucB/samB family DQQ11_RS15945 PF03814 Potassium-transporting ATPase A subunit DQQ11_RS15955 PF02669 K+-transporting ATPase, c chain DQQ11_RS15960 PF02702 Osmosensitive K+ channel His kinase sensor domain DQQ11_RS15960 PF00512 His Kinase A (phospho-acceptor) domain DQQ11_RS15960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DQQ11_RS15960 PF13493 Domain of unknown function (DUF4118) DQQ11_RS15965 PF00072 Response regulator receiver domain DQQ11_RS15965 PF00486 Transcriptional regulatory protein, C terminal