locus-tag class description AYR56_RS00010 PF08279 HTH domain AYR56_RS00010 PF02829 3H domain AYR56_RS00015 PF07690 Major Facilitator Superfamily AYR56_RS00020 PF01047 MarR family AYR56_RS00045 PF00772 DnaB-like helicase N terminal domain AYR56_RS00045 PF03796 DnaB-like helicase C terminal domain AYR56_RS00070 PF00834 Ribulose-phosphate 3 epimerase family AYR56_RS00075 PF03613 PTS system mannose/fructose/sorbose family IID component AYR56_RS00085 PF03830 PTS system sorbose subfamily IIB component AYR56_RS00090 PF03610 PTS system fructose IIA component AYR56_RS00090 PF03830 PTS system sorbose subfamily IIB component AYR56_RS00095 PF08240 Alcohol dehydrogenase GroES-like domain AYR56_RS00095 PF00107 Zinc-binding dehydrogenase AYR56_RS00100 PF08220 DeoR-like helix-turn-helix domain AYR56_RS00100 PF00455 DeoR C terminal sensor domain AYR56_RS00105 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AYR56_RS00110 PF00701 Dihydrodipicolinate synthetase family AYR56_RS00115 PF00480 ROK family AYR56_RS00125 PF00999 Sodium/hydrogen exchanger family AYR56_RS00130 PF00474 Sodium:solute symporter family AYR56_RS00140 PF09363 XFP C-terminal domain AYR56_RS00140 PF09364 XFP N-terminal domain AYR56_RS00140 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase AYR56_RS00160 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AYR56_RS00160 PF13378 Enolase C-terminal domain-like AYR56_RS00165 PF00561 alpha/beta hydrolase fold AYR56_RS00175 PF00425 chorismate binding enzyme AYR56_RS00180 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR56_RS00185 PF00005 ABC transporter AYR56_RS00190 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS00195 PF09084 NMT1/THI5 like AYR56_RS00200 PF13193 AMP-binding enzyme C-terminal domain AYR56_RS00200 PF00501 AMP-binding enzyme AYR56_RS00220 PF00403 Heavy-metal-associated domain AYR56_RS00230 PF02665 Nitrate reductase gamma subunit AYR56_RS00230 PF00384 Molybdopterin oxidoreductase AYR56_RS00230 PF02613 Nitrate reductase delta subunit AYR56_RS00240 PF14711 Respiratory nitrate reductase beta C-terminal AYR56_RS00240 PF13247 4Fe-4S dicluster domain AYR56_RS00245 PF14710 Respiratory nitrate reductase alpha N-terminal AYR56_RS00245 PF00384 Molybdopterin oxidoreductase AYR56_RS00245 PF01568 Molydopterin dinucleotide binding domain AYR56_RS00250 PF00899 ThiF family AYR56_RS00255 PF00994 Probable molybdopterin binding domain AYR56_RS00260 PF03453 MoeA N-terminal region (domain I and II) AYR56_RS00260 PF03454 MoeA C-terminal region (domain IV) AYR56_RS00260 PF00994 Probable molybdopterin binding domain AYR56_RS00265 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AYR56_RS00270 PF01967 MoaC family AYR56_RS00275 PF12804 MobA-like NTP transferase domain AYR56_RS00295 PF07730 Histidine kinase AYR56_RS00295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR56_RS00300 PF00196 Bacterial regulatory proteins, luxR family AYR56_RS00300 PF00072 Response regulator receiver domain AYR56_RS00325 PF00348 Polyprenyl synthetase AYR56_RS00330 PF00501 AMP-binding enzyme AYR56_RS00330 PF13193 AMP-binding enzyme C-terminal domain AYR56_RS00335 PF00378 Enoyl-CoA hydratase/isomerase AYR56_RS00340 PF03061 Thioesterase superfamily AYR56_RS00345 PF07690 Major Facilitator Superfamily AYR56_RS00350 PF04055 Radical SAM superfamily AYR56_RS00350 PF06463 Molybdenum Cofactor Synthesis C AYR56_RS00365 PF01032 FecCD transport family AYR56_RS00370 PF00005 ABC transporter AYR56_RS00380 PF01965 DJ-1/PfpI family AYR56_RS00385 PF07690 Major Facilitator Superfamily AYR56_RS00395 PF00248 Aldo/keto reductase family AYR56_RS00405 PF02219 Methylenetetrahydrofolate reductase AYR56_RS00420 PF00730 HhH-GPD superfamily base excision DNA repair protein AYR56_RS00420 PF14815 NUDIX domain AYR56_RS00430 PF06177 QueT transporter AYR56_RS00435 PF13458 Periplasmic binding protein AYR56_RS00440 PF07690 Major Facilitator Superfamily AYR56_RS00445 PF01791 DeoC/LacD family aldolase AYR56_RS00455 PF06071 Protein of unknown function (DUF933) AYR56_RS00455 PF01926 50S ribosome-binding GTPase AYR56_RS00460 PF06107 Bacterial protein of unknown function (DUF951) AYR56_RS00465 PF02195 ParB-like nuclease domain AYR56_RS00465 PF17762 HTH domain found in ParB protein AYR56_RS00470 PF13614 AAA domain AYR56_RS00475 PF17762 HTH domain found in ParB protein AYR56_RS00475 PF02195 ParB-like nuclease domain AYR56_RS00480 PF02527 rRNA small subunit methyltransferase G AYR56_RS00490 PF00230 Major intrinsic protein AYR56_RS00495 PF00107 Zinc-binding dehydrogenase AYR56_RS00495 PF08240 Alcohol dehydrogenase GroES-like domain AYR56_RS00500 PF01638 HxlR-like helix-turn-helix AYR56_RS00505 PF12704 MacB-like periplasmic core domain AYR56_RS00505 PF02687 FtsX-like permease family AYR56_RS00505 PF00005 ABC transporter AYR56_RS00525 PF00180 Isocitrate/isopropylmalate dehydrogenase AYR56_RS00530 PF13350 Tyrosine phosphatase family AYR56_RS00535 PF04262 Glutamate-cysteine ligase AYR56_RS00535 PF18419 ATP-grasp-like domain AYR56_RS00535 PF02655 ATP-grasp domain AYR56_RS00545 PF00194 Eukaryotic-type carbonic anhydrase AYR56_RS00550 PF00860 Permease family AYR56_RS00560 PF00557 Metallopeptidase family M24 AYR56_RS00590 PF00005 ABC transporter AYR56_RS00590 PF13732 Domain of unknown function (DUF4162) AYR56_RS00600 PF03352 Methyladenine glycosylase AYR56_RS00600 PF13673 Acetyltransferase (GNAT) domain AYR56_RS00600 PF00117 Glutamine amidotransferase class-I AYR56_RS00600 PF00958 GMP synthase C terminal domain AYR56_RS00600 PF13302 Acetyltransferase (GNAT) domain AYR56_RS00605 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR56_RS00605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYR56_RS00615 PF01145 SPFH domain / Band 7 family AYR56_RS00625 PF00083 Sugar (and other) transporter AYR56_RS00630 PF00694 Aconitase C-terminal domain AYR56_RS00635 PF00330 Aconitase family (aconitate hydratase) AYR56_RS00640 PF00180 Isocitrate/isopropylmalate dehydrogenase AYR56_RS00645 PF00682 HMGL-like AYR56_RS00645 PF08502 LeuA allosteric (dimerisation) domain AYR56_RS00650 PF00291 Pyridoxal-phosphate dependent enzyme AYR56_RS00650 PF14821 Threonine synthase N terminus AYR56_RS00665 PF01053 Cys/Met metabolism PLP-dependent enzyme AYR56_RS00670 PF07687 Peptidase dimerisation domain AYR56_RS00670 PF01546 Peptidase family M20/M25/M40 AYR56_RS00675 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS00680 PF09383 NIL domain AYR56_RS00680 PF00005 ABC transporter AYR56_RS00695 PF02645 Uncharacterised protein, DegV family COG1307 AYR56_RS00705 PF01055 Glycosyl hydrolases family 31 AYR56_RS00710 PF01501 Glycosyl transferase family 8 AYR56_RS00720 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AYR56_RS00720 PF01476 LysM domain AYR56_RS00740 PF01380 SIS domain AYR56_RS00740 PF01418 Helix-turn-helix domain, rpiR family AYR56_RS00745 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR56_RS00745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYR56_RS00750 PF03129 Anticodon binding domain AYR56_RS00750 PF09180 Prolyl-tRNA synthetase, C-terminal AYR56_RS00750 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYR56_RS00755 PF00581 Rhodanese-like domain AYR56_RS00765 PF03841 L-seryl-tRNA selenium transferase AYR56_RS00765 PF12390 Selenocysteine synthase N terminal AYR56_RS00770 PF00266 Aminotransferase class-V AYR56_RS00775 PF09105 Elongation factor SelB, winged helix AYR56_RS00775 PF03144 Elongation factor Tu domain 2 AYR56_RS00775 PF00009 Elongation factor Tu GTP binding domain AYR56_RS00775 PF09106 Elongation factor SelB, winged helix AYR56_RS00775 PF09107 Elongation factor SelB, winged helix AYR56_RS00790 PF00586 AIR synthase related protein, N-terminal domain AYR56_RS00790 PF02769 AIR synthase related protein, C-terminal domain AYR56_RS00815 PF08402 TOBE domain AYR56_RS00815 PF00005 ABC transporter AYR56_RS00830 PF13416 Bacterial extracellular solute-binding protein AYR56_RS00835 PF09335 SNARE associated Golgi protein AYR56_RS00850 PF09335 SNARE associated Golgi protein AYR56_RS00865 PF05544 Proline racemase AYR56_RS00875 PF09338 Glycine/sarcosine/betaine reductase component B subunits AYR56_RS00880 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) AYR56_RS00885 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) AYR56_RS00895 PF09338 Glycine/sarcosine/betaine reductase component B subunits AYR56_RS00910 PF00581 Rhodanese-like domain AYR56_RS00925 PF00561 alpha/beta hydrolase fold AYR56_RS00940 PF00854 POT family AYR56_RS00945 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AYR56_RS00945 PF13375 RnfC Barrel sandwich hybrid domain AYR56_RS00945 PF10531 SLBB domain AYR56_RS00945 PF13237 4Fe-4S dicluster domain AYR56_RS00950 PF00854 POT family AYR56_RS00955 PF00557 Metallopeptidase family M24 AYR56_RS00955 PF01321 Creatinase/Prolidase N-terminal domain AYR56_RS00960 PF03577 Peptidase family C69 AYR56_RS00970 PF01487 Type I 3-dehydroquinase AYR56_RS00975 PF08501 Shikimate dehydrogenase substrate binding domain AYR56_RS00975 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AYR56_RS00980 PF03466 LysR substrate binding domain AYR56_RS00980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR56_RS00995 PF02424 ApbE family AYR56_RS01000 PF07690 Major Facilitator Superfamily AYR56_RS01005 PF07690 Major Facilitator Superfamily AYR56_RS01010 PF08501 Shikimate dehydrogenase substrate binding domain AYR56_RS01010 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AYR56_RS01015 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AYR56_RS01015 PF08501 Shikimate dehydrogenase substrate binding domain AYR56_RS01030 PF03466 LysR substrate binding domain AYR56_RS01030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR56_RS01035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AYR56_RS01035 PF08279 HTH domain AYR56_RS01040 PF00155 Aminotransferase class I and II AYR56_RS01045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AYR56_RS01045 PF02378 Phosphotransferase system, EIIC AYR56_RS01050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AYR56_RS01050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AYR56_RS01055 PF00872 Transposase, Mutator family AYR56_RS01060 PF03358 NADPH-dependent FMN reductase AYR56_RS01060 PF04205 FMN-binding domain AYR56_RS01060 PF00890 FAD binding domain AYR56_RS01065 PF03466 LysR substrate binding domain AYR56_RS01065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR56_RS01070 PF03466 LysR substrate binding domain AYR56_RS01070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR56_RS01075 PF02441 Flavoprotein AYR56_RS01085 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AYR56_RS01095 PF05223 NTF2-like N-terminal transpeptidase domain AYR56_RS01095 PF03717 Penicillin-binding Protein dimerisation domain AYR56_RS01095 PF00905 Penicillin binding protein transpeptidase domain AYR56_RS01110 PF02386 Cation transport protein AYR56_RS01115 PF02254 TrkA-N domain AYR56_RS01115 PF02080 TrkA-C domain AYR56_RS01125 PF12848 ABC transporter AYR56_RS01125 PF00005 ABC transporter AYR56_RS01135 PF00535 Glycosyl transferase family 2 AYR56_RS01140 PF00534 Glycosyl transferases group 1 AYR56_RS01140 PF13439 Glycosyltransferase Family 4 AYR56_RS01150 PF02397 Bacterial sugar transferase AYR56_RS01165 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AYR56_RS01170 PF00535 Glycosyl transferase family 2 AYR56_RS01185 PF00300 Histidine phosphatase superfamily (branch 1) AYR56_RS01200 PF00403 Heavy-metal-associated domain AYR56_RS01205 PF07690 Major Facilitator Superfamily AYR56_RS01215 PF03960 ArsC family AYR56_RS01220 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AYR56_RS01225 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AYR56_RS01225 PF00535 Glycosyl transferase family 2 AYR56_RS01235 PF02525 Flavodoxin-like fold AYR56_RS01240 PF03449 Transcription elongation factor, N-terminal AYR56_RS01240 PF01272 Transcription elongation factor, GreA/GreB, C-term AYR56_RS01250 PF00324 Amino acid permease AYR56_RS01275 PF07690 Major Facilitator Superfamily AYR56_RS01280 PF00664 ABC transporter transmembrane region AYR56_RS01280 PF00005 ABC transporter AYR56_RS01285 PF01501 Glycosyl transferase family 8 AYR56_RS01285 PF08437 Glycosyl transferase family 8 C-terminal AYR56_RS01290 PF07690 Major Facilitator Superfamily AYR56_RS01295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR56_RS01295 PF03466 LysR substrate binding domain AYR56_RS01300 PF03358 NADPH-dependent FMN reductase AYR56_RS01300 PF00890 FAD binding domain AYR56_RS01300 PF04205 FMN-binding domain AYR56_RS01305 PF03960 ArsC family AYR56_RS01310 PF02311 AraC-like ligand binding domain AYR56_RS01310 PF12833 Helix-turn-helix domain AYR56_RS01320 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AYR56_RS01320 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AYR56_RS01325 PF03608 PTS system enzyme II sorbitol-specific factor AYR56_RS01340 PF00106 short chain dehydrogenase AYR56_RS01345 PF06426 Serine acetyltransferase, N-terminal AYR56_RS01345 PF00132 Bacterial transferase hexapeptide (six repeats) AYR56_RS01350 PF01053 Cys/Met metabolism PLP-dependent enzyme AYR56_RS01360 PF02540 NAD synthase AYR56_RS01365 PF00230 Major intrinsic protein AYR56_RS01370 PF01969 Protein of unknown function DUF111 AYR56_RS01375 PF01969 Protein of unknown function DUF111 AYR56_RS01380 PF00731 AIR carboxylase AYR56_RS01385 PF09861 Lactate racemase N-terminal domain AYR56_RS01390 PF13545 Crp-like helix-turn-helix domain AYR56_RS01400 PF02361 Cobalt transport protein AYR56_RS01405 PF00005 ABC transporter AYR56_RS01430 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS01435 PF00294 pfkB family carbohydrate kinase AYR56_RS01435 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AYR56_RS01445 PF07690 Major Facilitator Superfamily AYR56_RS01450 PF13597 Anaerobic ribonucleoside-triphosphate reductase AYR56_RS01450 PF03477 ATP cone domain AYR56_RS01465 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) AYR56_RS01475 PF13411 MerR HTH family regulatory protein AYR56_RS01480 PF03167 Uracil DNA glycosylase superfamily AYR56_RS01485 PF07690 Major Facilitator Superfamily AYR56_RS01495 PF00881 Nitroreductase family AYR56_RS01500 PF00106 short chain dehydrogenase AYR56_RS01515 PF00106 short chain dehydrogenase AYR56_RS01520 PF00679 Elongation factor G C-terminus AYR56_RS01520 PF14492 Elongation Factor G, domain II AYR56_RS01520 PF00009 Elongation factor Tu GTP binding domain AYR56_RS01520 PF03764 Elongation factor G, domain IV AYR56_RS01525 PF00248 Aldo/keto reductase family AYR56_RS01540 PF00132 Bacterial transferase hexapeptide (six repeats) AYR56_RS01545 PF00872 Transposase, Mutator family AYR56_RS01550 PF00665 Integrase core domain AYR56_RS01555 PF01695 IstB-like ATP binding protein AYR56_RS01560 PF00872 Transposase, Mutator family AYR56_RS01575 PF02590 Predicted SPOUT methyltransferase AYR56_RS01580 PF13180 PDZ domain AYR56_RS01585 PF00753 Metallo-beta-lactamase superfamily AYR56_RS01600 PF00512 His Kinase A (phospho-acceptor) domain AYR56_RS01600 PF00672 HAMP domain AYR56_RS01600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR56_RS01600 PF13426 PAS domain AYR56_RS01605 PF00486 Transcriptional regulatory protein, C terminal AYR56_RS01605 PF00072 Response regulator receiver domain AYR56_RS01620 PF07722 Peptidase C26 AYR56_RS01630 PF02581 Thiamine monophosphate synthase AYR56_RS01635 PF08543 Phosphomethylpyrimidine kinase AYR56_RS01640 PF02110 Hydroxyethylthiazole kinase family AYR56_RS01645 PF00709 Adenylosuccinate synthetase AYR56_RS01655 PF00772 DnaB-like helicase N terminal domain AYR56_RS01655 PF03796 DnaB-like helicase C terminal domain AYR56_RS01660 PF03948 Ribosomal protein L9, C-terminal domain AYR56_RS01660 PF01281 Ribosomal protein L9, N-terminal domain AYR56_RS01665 PF02272 DHHA1 domain AYR56_RS01665 PF01368 DHH family AYR56_RS01670 PF01084 Ribosomal protein S18 AYR56_RS01675 PF00436 Single-strand binding protein family AYR56_RS01680 PF01250 Ribosomal protein S6 AYR56_RS01685 PF03989 DNA gyrase C-terminal domain, beta-propeller AYR56_RS01685 PF00521 DNA gyrase/topoisomerase IV, subunit A AYR56_RS01690 PF01751 Toprim domain AYR56_RS01690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR56_RS01690 PF00204 DNA gyrase B AYR56_RS01690 PF00986 DNA gyrase B subunit, carboxyl terminus AYR56_RS01695 PF02463 RecF/RecN/SMC N terminal domain AYR56_RS01705 PF02768 DNA polymerase III beta subunit, C-terminal domain AYR56_RS01705 PF02767 DNA polymerase III beta subunit, central domain AYR56_RS01705 PF00712 DNA polymerase III beta subunit, N-terminal domain AYR56_RS01710 PF00308 Bacterial dnaA protein AYR56_RS01710 PF08299 Bacterial dnaA protein helix-turn-helix AYR56_RS01715 PF00825 Ribonuclease P AYR56_RS01720 PF02096 60Kd inner membrane protein AYR56_RS01730 PF10396 GTP-binding protein TrmE N-terminus AYR56_RS01730 PF12631 MnmE helical domain AYR56_RS01730 PF01926 50S ribosome-binding GTPase AYR56_RS01735 PF01134 Glucose inhibited division protein A AYR56_RS01735 PF13932 GidA associated domain AYR56_RS01740 PF13411 MerR HTH family regulatory protein AYR56_RS01745 PF07690 Major Facilitator Superfamily AYR56_RS01755 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AYR56_RS01755 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AYR56_RS01760 PF01266 FAD dependent oxidoreductase AYR56_RS01760 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AYR56_RS01765 PF00230 Major intrinsic protein AYR56_RS01780 PF02673 Bacitracin resistance protein BacA AYR56_RS01790 PF03577 Peptidase family C69 AYR56_RS01795 PF00871 Acetokinase family AYR56_RS01800 PF00909 Ammonium Transporter Family AYR56_RS01805 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AYR56_RS01810 PF00248 Aldo/keto reductase family AYR56_RS01815 PF04138 GtrA-like protein AYR56_RS01820 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AYR56_RS01820 PF01872 RibD C-terminal domain AYR56_RS01825 PF00677 Lumazine binding domain AYR56_RS01830 PF00925 GTP cyclohydrolase II AYR56_RS01830 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AYR56_RS01835 PF00885 6,7-dimethyl-8-ribityllumazine synthase AYR56_RS01845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AYR56_RS01845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AYR56_RS01850 PF07690 Major Facilitator Superfamily AYR56_RS01855 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AYR56_RS01855 PF14572 Phosphoribosyl synthetase-associated domain AYR56_RS01865 PF05167 Uncharacterised ACR (DUF711) AYR56_RS01875 PF04138 GtrA-like protein AYR56_RS01885 PF00535 Glycosyl transferase family 2 AYR56_RS01900 PF09335 SNARE associated Golgi protein AYR56_RS01905 PF00512 His Kinase A (phospho-acceptor) domain AYR56_RS01905 PF08521 Two-component sensor kinase N-terminal AYR56_RS01905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR56_RS01910 PF00486 Transcriptional regulatory protein, C terminal AYR56_RS01910 PF00072 Response regulator receiver domain AYR56_RS01945 PF00367 phosphotransferase system, EIIB AYR56_RS01945 PF02378 Phosphotransferase system, EIIC AYR56_RS01945 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AYR56_RS01950 PF13419 Haloacid dehalogenase-like hydrolase AYR56_RS01955 PF03632 Glycosyl hydrolase family 65 central catalytic domain AYR56_RS01955 PF03636 Glycosyl hydrolase family 65, N-terminal domain AYR56_RS01955 PF03633 Glycosyl hydrolase family 65, C-terminal domain AYR56_RS01960 PF03636 Glycosyl hydrolase family 65, N-terminal domain AYR56_RS01960 PF03632 Glycosyl hydrolase family 65 central catalytic domain AYR56_RS01960 PF03633 Glycosyl hydrolase family 65, C-terminal domain AYR56_RS02005 PF01497 Periplasmic binding protein AYR56_RS02010 PF01032 FecCD transport family AYR56_RS02015 PF01032 FecCD transport family AYR56_RS02020 PF01118 Semialdehyde dehydrogenase, NAD binding domain AYR56_RS02020 PF02774 Semialdehyde dehydrogenase, dimerisation domain AYR56_RS02025 PF06100 MCRA family AYR56_RS02030 PF00762 Ferrochelatase AYR56_RS02040 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR56_RS02040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYR56_RS02045 PF02566 OsmC-like protein AYR56_RS02055 PF03099 Biotin/lipoate A/B protein ligase family AYR56_RS02055 PF10437 Bacterial lipoate protein ligase C-terminus AYR56_RS02060 PF00300 Histidine phosphatase superfamily (branch 1) AYR56_RS02065 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AYR56_RS02070 PF03960 ArsC family AYR56_RS02075 PF00248 Aldo/keto reductase family AYR56_RS02080 PF00011 Hsp20/alpha crystallin family AYR56_RS02085 PF00571 CBS domain AYR56_RS02085 PF00005 ABC transporter AYR56_RS02090 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS02095 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AYR56_RS02100 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS02105 PF00731 AIR carboxylase AYR56_RS02110 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AYR56_RS02110 PF02222 ATP-grasp domain AYR56_RS02115 PF01259 SAICAR synthetase AYR56_RS02130 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AYR56_RS02130 PF00586 AIR synthase related protein, N-terminal domain AYR56_RS02130 PF02769 AIR synthase related protein, C-terminal domain AYR56_RS02135 PF13537 Glutamine amidotransferase domain AYR56_RS02135 PF00156 Phosphoribosyl transferase domain AYR56_RS02140 PF00586 AIR synthase related protein, N-terminal domain AYR56_RS02140 PF02769 AIR synthase related protein, C-terminal domain AYR56_RS02145 PF00551 Formyl transferase AYR56_RS02150 PF02142 MGS-like domain AYR56_RS02150 PF01808 AICARFT/IMPCHase bienzyme AYR56_RS02155 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AYR56_RS02155 PF02843 Phosphoribosylglycinamide synthetase, C domain AYR56_RS02155 PF02844 Phosphoribosylglycinamide synthetase, N domain AYR56_RS02190 PF13458 Periplasmic binding protein AYR56_RS02195 PF02653 Branched-chain amino acid transport system / permease component AYR56_RS02210 PF00005 ABC transporter AYR56_RS02215 PF00571 CBS domain AYR56_RS02220 PF00075 RNase H AYR56_RS02225 PF03816 Cell envelope-related transcriptional attenuator domain AYR56_RS02230 PF08534 Redoxin AYR56_RS02245 PF11799 impB/mucB/samB family C-terminal domain AYR56_RS02245 PF00817 impB/mucB/samB family AYR56_RS02245 PF11798 IMS family HHH motif AYR56_RS02265 PF00248 Aldo/keto reductase family AYR56_RS02275 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AYR56_RS02275 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AYR56_RS02280 PF12822 ECF transporter, substrate-specific component AYR56_RS02285 PF14667 Polysaccharide biosynthesis C-terminal domain AYR56_RS02285 PF01943 Polysaccharide biosynthesis protein AYR56_RS02290 PF04991 LicD family AYR56_RS02300 PF03960 ArsC family AYR56_RS02305 PF03466 LysR substrate binding domain AYR56_RS02305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR56_RS02310 PF03601 Conserved hypothetical protein 698 AYR56_RS02315 PF00004 ATPase family associated with various cellular activities (AAA) AYR56_RS02315 PF12002 MgsA AAA+ ATPase C terminal AYR56_RS02315 PF16193 AAA C-terminal domain AYR56_RS02320 PF01381 Helix-turn-helix AYR56_RS02325 PF04298 Putative neutral zinc metallopeptidase AYR56_RS02335 PF07685 CobB/CobQ-like glutamine amidotransferase domain AYR56_RS02340 PF00534 Glycosyl transferases group 1 AYR56_RS02350 PF09318 Glycosyl transferase 1 domain A AYR56_RS02350 PF00534 Glycosyl transferases group 1 AYR56_RS02365 PF00571 CBS domain AYR56_RS02365 PF00478 IMP dehydrogenase / GMP reductase domain AYR56_RS02390 PF00689 Cation transporting ATPase, C-terminus AYR56_RS02390 PF00690 Cation transporter/ATPase, N-terminus AYR56_RS02395 PF01842 ACT domain AYR56_RS02395 PF02153 Prephenate dehydrogenase AYR56_RS02400 PF01202 Shikimate kinase AYR56_RS02405 PF13167 GTP-binding GTPase N-terminal AYR56_RS02405 PF01926 50S ribosome-binding GTPase AYR56_RS02405 PF16360 GTP-binding GTPase Middle Region AYR56_RS02410 PF00440 Bacterial regulatory proteins, tetR family AYR56_RS02410 PF16295 Tetracyclin repressor-like, C-terminal domain AYR56_RS02415 PF03176 MMPL family AYR56_RS02425 PF07690 Major Facilitator Superfamily AYR56_RS02430 PF00950 ABC 3 transport family AYR56_RS02435 PF00005 ABC transporter AYR56_RS02455 PF08546 Ketopantoate reductase PanE/ApbA C terminal AYR56_RS02455 PF02558 Ketopantoate reductase PanE/ApbA AYR56_RS02475 PF00582 Universal stress protein family AYR56_RS02485 PF00893 Small Multidrug Resistance protein AYR56_RS02490 PF00893 Small Multidrug Resistance protein AYR56_RS02515 PF01047 MarR family AYR56_RS02520 PF02595 Glycerate kinase family AYR56_RS02545 PF02378 Phosphotransferase system, EIIC AYR56_RS02545 PF00367 phosphotransferase system, EIIB AYR56_RS02545 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AYR56_RS02550 PF00874 PRD domain AYR56_RS02550 PF03123 CAT RNA binding domain AYR56_RS02555 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AYR56_RS02555 PF00367 phosphotransferase system, EIIB AYR56_RS02555 PF02378 Phosphotransferase system, EIIC AYR56_RS02560 PF00232 Glycosyl hydrolase family 1 AYR56_RS02590 PF01925 Sulfite exporter TauE/SafE AYR56_RS02595 PF04203 Sortase domain AYR56_RS02605 PF01661 Macro domain AYR56_RS02620 PF08267 Cobalamin-independent synthase, N-terminal domain AYR56_RS02620 PF01717 Cobalamin-independent synthase, Catalytic domain AYR56_RS02625 PF01527 Transposase AYR56_RS02630 PF13333 Integrase core domain AYR56_RS02630 PF00665 Integrase core domain AYR56_RS02635 PF01820 D-ala D-ala ligase N-terminus AYR56_RS02635 PF07478 D-ala D-ala ligase C-terminus AYR56_RS02640 PF00155 Aminotransferase class I and II AYR56_RS02650 PF03466 LysR substrate binding domain AYR56_RS02650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR56_RS02655 PF10502 Signal peptidase, peptidase S26 AYR56_RS02660 PF02811 PHP domain AYR56_RS02665 PF13393 Histidyl-tRNA synthetase AYR56_RS02670 PF01634 ATP phosphoribosyltransferase AYR56_RS02675 PF00815 Histidinol dehydrogenase AYR56_RS02685 PF00117 Glutamine amidotransferase class-I AYR56_RS02690 PF00977 Histidine biosynthesis protein AYR56_RS02695 PF00977 Histidine biosynthesis protein AYR56_RS02700 PF01502 Phosphoribosyl-AMP cyclohydrolase AYR56_RS02705 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AYR56_RS02710 PF00155 Aminotransferase class I and II AYR56_RS02715 PF07690 Major Facilitator Superfamily AYR56_RS02720 PF01638 HxlR-like helix-turn-helix AYR56_RS02725 PF01112 Asparaginase AYR56_RS02750 PF07690 Major Facilitator Superfamily AYR56_RS02755 PF08240 Alcohol dehydrogenase GroES-like domain AYR56_RS02755 PF00107 Zinc-binding dehydrogenase AYR56_RS02770 PF01545 Cation efflux family AYR56_RS02775 PF03741 Integral membrane protein TerC family AYR56_RS02780 PF00689 Cation transporting ATPase, C-terminus AYR56_RS02780 PF00690 Cation transporter/ATPase, N-terminus AYR56_RS02795 PF00154 recA bacterial DNA recombination protein AYR56_RS02810 PF04226 Transglycosylase associated protein AYR56_RS02825 PF03780 Asp23 family, cell envelope-related function AYR56_RS02830 PF03780 Asp23 family, cell envelope-related function AYR56_RS02840 PF00999 Sodium/hydrogen exchanger family AYR56_RS02845 PF00690 Cation transporter/ATPase, N-terminus AYR56_RS02845 PF00689 Cation transporting ATPase, C-terminus AYR56_RS02850 PF00255 Glutathione peroxidase AYR56_RS02870 PF00582 Universal stress protein family AYR56_RS02895 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AYR56_RS02920 PF00210 Ferritin-like domain AYR56_RS02925 PF00106 short chain dehydrogenase AYR56_RS02965 PF17746 SfsA N-terminal OB domain AYR56_RS02965 PF03749 Sugar fermentation stimulation protein RE domain AYR56_RS02970 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AYR56_RS02970 PF00056 lactate/malate dehydrogenase, NAD binding domain AYR56_RS02975 PF07690 Major Facilitator Superfamily AYR56_RS02980 PF01758 Sodium Bile acid symporter family AYR56_RS02985 PF01883 Iron-sulfur cluster assembly protein AYR56_RS02990 PF00920 Dehydratase family AYR56_RS03000 PF00205 Thiamine pyrophosphate enzyme, central domain AYR56_RS03000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AYR56_RS03000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AYR56_RS03005 PF01842 ACT domain AYR56_RS03005 PF10369 Small subunit of acetolactate synthase AYR56_RS03010 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AYR56_RS03010 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AYR56_RS03015 PF00291 Pyridoxal-phosphate dependent enzyme AYR56_RS03015 PF00585 C-terminal regulatory domain of Threonine dehydratase AYR56_RS03020 PF00005 ABC transporter AYR56_RS03025 PF01042 Endoribonuclease L-PSP AYR56_RS03030 PF01063 Amino-transferase class IV AYR56_RS03040 PF13333 Integrase core domain AYR56_RS03040 PF13276 HTH-like domain AYR56_RS03040 PF00665 Integrase core domain AYR56_RS03060 PF01569 PAP2 superfamily AYR56_RS03065 PF08439 Oligopeptidase F AYR56_RS03065 PF01432 Peptidase family M3 AYR56_RS03075 PF00005 ABC transporter AYR56_RS03075 PF12848 ABC transporter AYR56_RS03080 PF03577 Peptidase family C69 AYR56_RS03090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYR56_RS03090 PF02403 Seryl-tRNA synthetase N-terminal domain AYR56_RS03095 PF03315 Serine dehydratase beta chain AYR56_RS03095 PF01842 ACT domain AYR56_RS03100 PF03313 Serine dehydratase alpha chain AYR56_RS03110 PF03881 Fructosamine kinase AYR56_RS03135 PF02424 ApbE family AYR56_RS03140 PF13276 HTH-like domain AYR56_RS03140 PF00665 Integrase core domain AYR56_RS03140 PF13333 Integrase core domain AYR56_RS03150 PF01527 Transposase AYR56_RS03185 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS03190 PF00571 CBS domain AYR56_RS03190 PF00005 ABC transporter AYR56_RS03195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYR56_RS03195 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR56_RS03200 PF00579 tRNA synthetases class I (W and Y) AYR56_RS03205 PF04961 Formiminotransferase-cyclodeaminase AYR56_RS03215 PF02503 Polyphosphate kinase middle domain AYR56_RS03215 PF13090 Polyphosphate kinase C-terminal domain 2 AYR56_RS03215 PF17941 Polyphosphate kinase C-terminal domain 1 AYR56_RS03215 PF13089 Polyphosphate kinase N-terminal domain AYR56_RS03220 PF01761 3-dehydroquinate synthase AYR56_RS03220 PF02541 Ppx/GppA phosphatase family AYR56_RS03230 PF00005 ABC transporter AYR56_RS03235 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS03240 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYR56_RS03245 PF00368 Hydroxymethylglutaryl-coenzyme A reductase AYR56_RS03275 PF05525 Branched-chain amino acid transport protein AYR56_RS03280 PF00892 EamA-like transporter family AYR56_RS03295 PF17755 UvrA DNA-binding domain AYR56_RS03295 PF00005 ABC transporter AYR56_RS03295 PF17760 UvrA interaction domain AYR56_RS03335 PF06874 Firmicute fructose-1,6-bisphosphatase AYR56_RS03340 PF04715 Anthranilate synthase component I, N terminal region AYR56_RS03340 PF00425 chorismate binding enzyme AYR56_RS03345 PF00591 Glycosyl transferase family, a/b domain AYR56_RS03345 PF02885 Glycosyl transferase family, helical bundle domain AYR56_RS03345 PF00117 Glutamine amidotransferase class-I AYR56_RS03350 PF00591 Glycosyl transferase family, a/b domain AYR56_RS03350 PF02885 Glycosyl transferase family, helical bundle domain AYR56_RS03355 PF00218 Indole-3-glycerol phosphate synthase AYR56_RS03360 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AYR56_RS03365 PF00291 Pyridoxal-phosphate dependent enzyme AYR56_RS03370 PF00290 Tryptophan synthase alpha chain AYR56_RS03375 PF09335 SNARE associated Golgi protein AYR56_RS03385 PF01053 Cys/Met metabolism PLP-dependent enzyme AYR56_RS03405 PF00872 Transposase, Mutator family AYR56_RS03415 PF00085 Thioredoxin AYR56_RS03425 PF00072 Response regulator receiver domain AYR56_RS03425 PF00486 Transcriptional regulatory protein, C terminal AYR56_RS03430 PF00512 His Kinase A (phospho-acceptor) domain AYR56_RS03430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR56_RS03430 PF18719 ArlS sensor domain AYR56_RS03445 PF00501 AMP-binding enzyme AYR56_RS03445 PF13193 AMP-binding enzyme C-terminal domain AYR56_RS03450 PF03062 MBOAT, membrane-bound O-acyltransferase family AYR56_RS03455 PF00550 Phosphopantetheine attachment site AYR56_RS03460 PF04914 DltD protein AYR56_RS03480 PF00872 Transposase, Mutator family AYR56_RS03485 PF09335 SNARE associated Golgi protein AYR56_RS03530 PF00877 NlpC/P60 family AYR56_RS03540 PF03577 Peptidase family C69 AYR56_RS03545 PF12705 PD-(D/E)XK nuclease superfamily AYR56_RS03550 PF12705 PD-(D/E)XK nuclease superfamily AYR56_RS03550 PF13361 UvrD-like helicase C-terminal domain AYR56_RS03550 PF00580 UvrD/REP helicase N-terminal domain AYR56_RS03575 PF08331 Domain of unknown function (DUF1730) AYR56_RS03580 PF12833 Helix-turn-helix domain AYR56_RS03595 PF00665 Integrase core domain AYR56_RS03595 PF13276 HTH-like domain AYR56_RS03595 PF13333 Integrase core domain AYR56_RS03600 PF01527 Transposase AYR56_RS03610 PF06458 MucBP domain AYR56_RS03615 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS03620 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AYR56_RS03625 PF02378 Phosphotransferase system, EIIC AYR56_RS03625 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AYR56_RS03630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AYR56_RS03630 PF08279 HTH domain AYR56_RS03630 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AYR56_RS03630 PF00874 PRD domain AYR56_RS03630 PF05043 Mga helix-turn-helix domain AYR56_RS03635 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AYR56_RS03640 PF01232 Mannitol dehydrogenase Rossmann domain AYR56_RS03640 PF08125 Mannitol dehydrogenase C-terminal domain AYR56_RS03645 PF00072 Response regulator receiver domain AYR56_RS03645 PF00486 Transcriptional regulatory protein, C terminal AYR56_RS03650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR56_RS03650 PF00512 His Kinase A (phospho-acceptor) domain AYR56_RS03655 PF07943 Penicillin-binding protein 5, C-terminal domain AYR56_RS03655 PF00768 D-alanyl-D-alanine carboxypeptidase AYR56_RS03660 PF02875 Mur ligase family, glutamate ligase domain AYR56_RS03660 PF08245 Mur ligase middle domain AYR56_RS03670 PF01177 Asp/Glu/Hydantoin racemase AYR56_RS03695 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AYR56_RS03695 PF02885 Glycosyl transferase family, helical bundle domain AYR56_RS03695 PF00591 Glycosyl transferase family, a/b domain AYR56_RS03710 PF01594 AI-2E family transporter AYR56_RS03715 PF00155 Aminotransferase class I and II AYR56_RS03725 PF00300 Histidine phosphatase superfamily (branch 1) AYR56_RS03755 PF00561 alpha/beta hydrolase fold AYR56_RS03760 PF04607 Region found in RelA / SpoT proteins AYR56_RS03775 PF07690 Major Facilitator Superfamily AYR56_RS03780 PF01022 Bacterial regulatory protein, arsR family AYR56_RS03785 PF06953 Arsenical resistance operon trans-acting repressor ArsD AYR56_RS03790 PF02374 Anion-transporting ATPase AYR56_RS03795 PF02040 Arsenical pump membrane protein AYR56_RS03805 PF01451 Low molecular weight phosphotyrosine protein phosphatase AYR56_RS03815 PF00561 alpha/beta hydrolase fold AYR56_RS03835 PF00920 Dehydratase family AYR56_RS03840 PF01883 Iron-sulfur cluster assembly protein AYR56_RS03850 PF12704 MacB-like periplasmic core domain AYR56_RS03850 PF00005 ABC transporter AYR56_RS03850 PF00005 ABC transporter AYR56_RS03850 PF12704 MacB-like periplasmic core domain AYR56_RS03850 PF02687 FtsX-like permease family AYR56_RS03850 PF02687 FtsX-like permease family AYR56_RS03865 PF01501 Glycosyl transferase family 8 AYR56_RS03870 PF12464 Maltose acetyltransferase AYR56_RS03870 PF14602 Hexapeptide repeat of succinyl-transferase AYR56_RS03870 PF00132 Bacterial transferase hexapeptide (six repeats) AYR56_RS03880 PF00583 Acetyltransferase (GNAT) family AYR56_RS03895 PF06458 MucBP domain AYR56_RS03905 PF00239 Resolvase, N terminal domain AYR56_RS03905 PF02796 Helix-turn-helix domain of resolvase AYR56_RS03930 PF09285 Elongation factor P, C-terminal AYR56_RS03930 PF01132 Elongation factor P (EF-P) OB domain AYR56_RS03930 PF08207 Elongation factor P (EF-P) KOW-like domain AYR56_RS03950 PF13411 MerR HTH family regulatory protein AYR56_RS03955 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYR56_RS03960 PF03466 LysR substrate binding domain AYR56_RS03960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR56_RS03965 PF00390 Malic enzyme, N-terminal domain AYR56_RS03965 PF03949 Malic enzyme, NAD binding domain AYR56_RS03980 PF00005 ABC transporter AYR56_RS03985 PF02687 FtsX-like permease family AYR56_RS03985 PF12704 MacB-like periplasmic core domain AYR56_RS04010 PF00860 Permease family AYR56_RS04030 PF00106 short chain dehydrogenase AYR56_RS04045 PF13411 MerR HTH family regulatory protein AYR56_RS04055 PF00857 Isochorismatase family AYR56_RS04065 PF02583 Metal-sensitive transcriptional repressor AYR56_RS04070 PF13419 Haloacid dehalogenase-like hydrolase AYR56_RS04080 PF00465 Iron-containing alcohol dehydrogenase AYR56_RS04085 PF05368 NmrA-like family AYR56_RS04100 PF08239 Bacterial SH3 domain AYR56_RS04100 PF01520 N-acetylmuramoyl-L-alanine amidase AYR56_RS04105 PF00512 His Kinase A (phospho-acceptor) domain AYR56_RS04105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR56_RS04110 PF00486 Transcriptional regulatory protein, C terminal AYR56_RS04110 PF00072 Response regulator receiver domain AYR56_RS04115 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AYR56_RS04120 PF00535 Glycosyl transferase family 2 AYR56_RS04130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR56_RS04130 PF07730 Histidine kinase AYR56_RS04135 PF00072 Response regulator receiver domain AYR56_RS04135 PF00196 Bacterial regulatory proteins, luxR family AYR56_RS04160 PF00557 Metallopeptidase family M24 AYR56_RS04190 PF00535 Glycosyl transferase family 2 AYR56_RS04200 PF00534 Glycosyl transferases group 1 AYR56_RS04205 PF00534 Glycosyl transferases group 1 AYR56_RS04205 PF09318 Glycosyl transferase 1 domain A AYR56_RS04210 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AYR56_RS04210 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AYR56_RS04215 PF00478 IMP dehydrogenase / GMP reductase domain AYR56_RS04215 PF00571 CBS domain AYR56_RS04225 PF00994 Probable molybdopterin binding domain AYR56_RS04225 PF02464 Competence-damaged protein AYR56_RS04225 PF18146 Damage-inducible protein CinA KH domain AYR56_RS04240 PF01479 S4 domain AYR56_RS04240 PF00579 tRNA synthetases class I (W and Y) AYR56_RS04250 PF13520 Amino acid permease AYR56_RS04260 PF01264 Chorismate synthase AYR56_RS04265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AYR56_RS04270 PF00113 Enolase, C-terminal TIM barrel domain AYR56_RS04270 PF03952 Enolase, N-terminal domain AYR56_RS04280 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AYR56_RS04280 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AYR56_RS04295 PF00625 Guanylate kinase AYR56_RS04305 PF01475 Ferric uptake regulator family AYR56_RS04320 PF00155 Aminotransferase class I and II AYR56_RS04325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYR56_RS04325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYR56_RS04330 PF00005 ABC transporter AYR56_RS04335 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYR56_RS04340 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS04345 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS04355 PF13520 Amino acid permease AYR56_RS04360 PF03610 PTS system fructose IIA component AYR56_RS04365 PF13520 Amino acid permease AYR56_RS04375 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AYR56_RS04375 PF00056 lactate/malate dehydrogenase, NAD binding domain AYR56_RS04380 PF01195 Peptidyl-tRNA hydrolase AYR56_RS04385 PF00271 Helicase conserved C-terminal domain AYR56_RS04385 PF03461 TRCF domain AYR56_RS04385 PF17757 UvrB interaction domain AYR56_RS04385 PF02559 CarD-like/TRCF domain AYR56_RS04385 PF00270 DEAD/DEAH box helicase AYR56_RS04390 PF14667 Polysaccharide biosynthesis C-terminal domain AYR56_RS04390 PF01943 Polysaccharide biosynthesis protein AYR56_RS04395 PF01479 S4 domain AYR56_RS04405 PF00575 S1 RNA binding domain AYR56_RS04410 PF11734 TilS substrate C-terminal domain AYR56_RS04410 PF01171 PP-loop family AYR56_RS04415 PF00156 Phosphoribosyl transferase domain AYR56_RS04420 PF01434 Peptidase family M41 AYR56_RS04420 PF06480 FtsH Extracellular AYR56_RS04420 PF00004 ATPase family associated with various cellular activities (AAA) AYR56_RS04420 PF17862 AAA+ lid domain AYR56_RS04425 PF01430 Hsp33 protein AYR56_RS04430 PF01207 Dihydrouridine synthase (Dus) AYR56_RS04435 PF01336 OB-fold nucleic acid binding domain AYR56_RS04435 PF00152 tRNA synthetases class II (D, K and N) AYR56_RS04465 PF00854 POT family AYR56_RS04485 PF14748 Pyrroline-5-carboxylate reductase dimerisation AYR56_RS04485 PF03807 NADP oxidoreductase coenzyme F420-dependent AYR56_RS04490 PF01979 Amidohydrolase family AYR56_RS04495 PF00392 Bacterial regulatory proteins, gntR family AYR56_RS04495 PF07702 UTRA domain AYR56_RS04505 PF00483 Nucleotidyl transferase AYR56_RS04510 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AYR56_RS04515 PF16363 GDP-mannose 4,6 dehydratase AYR56_RS04520 PF04321 RmlD substrate binding domain AYR56_RS04530 PF00535 Glycosyl transferase family 2 AYR56_RS04535 PF00535 Glycosyl transferase family 2 AYR56_RS04550 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain AYR56_RS04550 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AYR56_RS04550 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AYR56_RS04555 PF02540 NAD synthase AYR56_RS04560 PF00689 Cation transporting ATPase, C-terminus AYR56_RS04560 PF00690 Cation transporter/ATPase, N-terminus AYR56_RS04580 PF02653 Branched-chain amino acid transport system / permease component AYR56_RS04585 PF00005 ABC transporter AYR56_RS04590 PF17674 HHH domain AYR56_RS04590 PF00575 S1 RNA binding domain AYR56_RS04590 PF09371 Tex-like protein N-terminal domain AYR56_RS04590 PF16921 Tex protein YqgF-like domain AYR56_RS04595 PF10263 SprT-like family AYR56_RS04600 PF00742 Homoserine dehydrogenase AYR56_RS04600 PF01842 ACT domain AYR56_RS04600 PF03447 Homoserine dehydrogenase, NAD binding domain AYR56_RS04605 PF00288 GHMP kinases N terminal domain AYR56_RS04605 PF08544 GHMP kinases C terminal AYR56_RS04615 PF00874 PRD domain AYR56_RS04615 PF03610 PTS system fructose IIA component AYR56_RS04615 PF00158 Sigma-54 interaction domain AYR56_RS04620 PF03830 PTS system sorbose subfamily IIB component AYR56_RS04620 PF03610 PTS system fructose IIA component AYR56_RS04625 PF03830 PTS system sorbose subfamily IIB component AYR56_RS04625 PF03610 PTS system fructose IIA component AYR56_RS04630 PF03610 PTS system fructose IIA component AYR56_RS04630 PF03830 PTS system sorbose subfamily IIB component AYR56_RS04635 PF03609 PTS system sorbose-specific iic component AYR56_RS04640 PF03613 PTS system mannose/fructose/sorbose family IID component AYR56_RS04665 PF00999 Sodium/hydrogen exchanger family AYR56_RS04670 PF01654 Cytochrome bd terminal oxidase subunit I AYR56_RS04675 PF02322 Cytochrome bd terminal oxidase subunit II AYR56_RS04680 PF00005 ABC transporter AYR56_RS04680 PF00664 ABC transporter transmembrane region AYR56_RS04685 PF00005 ABC transporter AYR56_RS04685 PF00664 ABC transporter transmembrane region AYR56_RS04695 PF00266 Aminotransferase class-V AYR56_RS04700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYR56_RS04700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYR56_RS04700 PF01842 ACT domain AYR56_RS04705 PF11728 Putative aromatic acid exporter C-terminal domain AYR56_RS04705 PF06081 Aromatic acid exporter family member 1 AYR56_RS04710 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AYR56_RS04710 PF13457 GW (Gly-Tryp) dipeptide domain AYR56_RS04720 PF02222 ATP-grasp domain AYR56_RS04720 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AYR56_RS04725 PF00206 Lyase AYR56_RS04725 PF10397 Adenylosuccinate lyase C-terminus AYR56_RS04730 PF00580 UvrD/REP helicase N-terminal domain AYR56_RS04730 PF13361 UvrD-like helicase C-terminal domain AYR56_RS04735 PF12826 Helix-hairpin-helix motif AYR56_RS04735 PF00533 BRCA1 C Terminus (BRCT) domain AYR56_RS04735 PF01653 NAD-dependent DNA ligase adenylation domain AYR56_RS04735 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AYR56_RS04735 PF03120 NAD-dependent DNA ligase OB-fold domain AYR56_RS04745 PF02686 Glu-tRNAGln amidotransferase C subunit AYR56_RS04750 PF01425 Amidase AYR56_RS04755 PF02934 GatB/GatE catalytic domain AYR56_RS04755 PF02637 GatB domain AYR56_RS04760 PF00781 Diacylglycerol kinase catalytic domain AYR56_RS04775 PF03050 Transposase IS66 family AYR56_RS04775 PF13817 IS66 C-terminal element AYR56_RS04775 PF13007 Transposase C of IS166 homeodomain AYR56_RS04775 PF13005 zinc-finger binding domain of transposase IS66 AYR56_RS04780 PF01938 TRAM domain AYR56_RS04780 PF05958 tRNA (Uracil-5-)-methyltransferase AYR56_RS04785 PF02645 Uncharacterised protein, DegV family COG1307 AYR56_RS04790 PF00860 Permease family AYR56_RS04795 PF13520 Amino acid permease AYR56_RS04800 PF01471 Putative peptidoglycan binding domain AYR56_RS04800 PF01183 Glycosyl hydrolases family 25 AYR56_RS04810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AYR56_RS04810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AYR56_RS04815 PF00270 DEAD/DEAH box helicase AYR56_RS04815 PF00271 Helicase conserved C-terminal domain AYR56_RS04835 PF00535 Glycosyl transferase family 2 AYR56_RS04840 PF00258 Flavodoxin AYR56_RS04850 PF00483 Nucleotidyl transferase AYR56_RS04855 PF00171 Aldehyde dehydrogenase family AYR56_RS04860 PF05958 tRNA (Uracil-5-)-methyltransferase AYR56_RS04860 PF01938 TRAM domain AYR56_RS04865 PF02631 RecX family AYR56_RS04870 PF04167 Protein of unknown function (DUF402) AYR56_RS04880 PF01594 AI-2E family transporter AYR56_RS04885 PF01595 Cyclin M transmembrane N-terminal domain AYR56_RS04885 PF03471 Transporter associated domain AYR56_RS04885 PF00571 CBS domain AYR56_RS04890 PF03144 Elongation factor Tu domain 2 AYR56_RS04890 PF16658 Class II release factor RF3, C-terminal domain AYR56_RS04890 PF00009 Elongation factor Tu GTP binding domain AYR56_RS04905 PF07724 AAA domain (Cdc48 subfamily) AYR56_RS04905 PF00004 ATPase family associated with various cellular activities (AAA) AYR56_RS04905 PF17871 AAA lid domain AYR56_RS04905 PF10431 C-terminal, D2-small domain, of ClpB protein AYR56_RS04915 PF00381 PTS HPr component phosphorylation site AYR56_RS04920 PF00391 PEP-utilising enzyme, mobile domain AYR56_RS04920 PF05524 PEP-utilising enzyme, N-terminal AYR56_RS04920 PF02896 PEP-utilising enzyme, TIM barrel domain AYR56_RS04935 PF13439 Glycosyltransferase Family 4 AYR56_RS04935 PF00534 Glycosyl transferases group 1 AYR56_RS04940 PF00534 Glycosyl transferases group 1 AYR56_RS04940 PF13439 Glycosyltransferase Family 4 AYR56_RS04950 PF08796 Protein of unknown function (DUF1797) AYR56_RS04955 PF00884 Sulfatase AYR56_RS05040 PF12706 Beta-lactamase superfamily domain AYR56_RS05045 PF03960 ArsC family AYR56_RS05050 PF05389 Negative regulator of genetic competence (MecA) AYR56_RS05075 PF04607 Region found in RelA / SpoT proteins AYR56_RS05080 PF01513 ATP-NAD kinase AYR56_RS05085 PF00849 RNA pseudouridylate synthase AYR56_RS05090 PF00571 CBS domain AYR56_RS05090 PF03448 MgtE intracellular N domain AYR56_RS05090 PF01769 Divalent cation transporter AYR56_RS05095 PF03932 CutC family AYR56_RS05100 PF10282 Lactonase, 7-bladed beta-propeller AYR56_RS05110 PF01594 AI-2E family transporter AYR56_RS05115 PF00253 Ribosomal protein S14p/S29e AYR56_RS05120 PF00478 IMP dehydrogenase / GMP reductase domain AYR56_RS05145 PF01381 Helix-turn-helix AYR56_RS05190 PF00772 DnaB-like helicase N terminal domain AYR56_RS05190 PF03796 DnaB-like helicase C terminal domain AYR56_RS05210 PF00436 Single-strand binding protein family AYR56_RS05235 PF01555 DNA methylase AYR56_RS05385 PF01464 Transglycosylase SLT domain AYR56_RS05450 PF01476 LysM domain AYR56_RS05450 PF05257 CHAP domain AYR56_RS05465 PF00588 SpoU rRNA Methylase family AYR56_RS05470 PF01751 Toprim domain AYR56_RS05470 PF01131 DNA topoisomerase AYR56_RS05480 PF17854 FtsK alpha domain AYR56_RS05480 PF01580 FtsK/SpoIIIE family AYR56_RS05480 PF09397 Ftsk gamma domain AYR56_RS05485 PF05193 Peptidase M16 inactive domain AYR56_RS05490 PF05193 Peptidase M16 inactive domain AYR56_RS05490 PF00675 Insulinase (Peptidase family M16) AYR56_RS05500 PF13464 Domain of unknown function (DUF4115) AYR56_RS05505 PF01066 CDP-alcohol phosphatidyltransferase AYR56_RS05510 PF02464 Competence-damaged protein AYR56_RS05510 PF18146 Damage-inducible protein CinA KH domain AYR56_RS05510 PF00994 Probable molybdopterin binding domain AYR56_RS05515 PF00154 recA bacterial DNA recombination protein AYR56_RS05520 PF12072 Domain of unknown function (DUF3552) AYR56_RS05520 PF00013 KH domain AYR56_RS05520 PF01966 HD domain AYR56_RS05525 PF00953 Glycosyl transferase family 4 AYR56_RS05530 PF09186 Domain of unknown function (DUF1949) AYR56_RS05530 PF01205 Uncharacterized protein family UPF0029 AYR56_RS05535 PF00271 Helicase conserved C-terminal domain AYR56_RS05535 PF04851 Type III restriction enzyme, res subunit AYR56_RS05545 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AYR56_RS05545 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AYR56_RS05550 PF07517 SecA DEAD-like domain AYR56_RS05550 PF01043 SecA preprotein cross-linking domain AYR56_RS05550 PF07516 SecA Wing and Scaffold domain AYR56_RS05555 PF03462 PCRF domain AYR56_RS05555 PF00472 RF-1 domain AYR56_RS05565 PF00486 Transcriptional regulatory protein, C terminal AYR56_RS05565 PF00072 Response regulator receiver domain AYR56_RS05570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR56_RS05570 PF00512 His Kinase A (phospho-acceptor) domain AYR56_RS05570 PF00989 PAS fold AYR56_RS05570 PF16736 Single Cache-like AYR56_RS05575 PF12849 PBP superfamily domain AYR56_RS05580 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS05585 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS05590 PF00005 ABC transporter AYR56_RS05595 PF00005 ABC transporter AYR56_RS05600 PF01895 PhoU domain AYR56_RS05610 PF04024 PspC domain AYR56_RS05620 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AYR56_RS05625 PF02603 HPr Serine kinase N terminus AYR56_RS05625 PF07475 HPr Serine kinase C-terminal domain AYR56_RS05630 PF01790 Prolipoprotein diacylglyceryl transferase AYR56_RS05635 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AYR56_RS05635 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AYR56_RS05645 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR56_RS05650 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AYR56_RS05650 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AYR56_RS05650 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AYR56_RS05650 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AYR56_RS05660 PF17757 UvrB interaction domain AYR56_RS05660 PF02151 UvrB/uvrC motif AYR56_RS05660 PF04851 Type III restriction enzyme, res subunit AYR56_RS05660 PF00271 Helicase conserved C-terminal domain AYR56_RS05660 PF12344 Ultra-violet resistance protein B AYR56_RS05665 PF17760 UvrA interaction domain AYR56_RS05665 PF17755 UvrA DNA-binding domain AYR56_RS05665 PF00005 ABC transporter AYR56_RS05675 PF00764 Arginosuccinate synthase AYR56_RS05680 PF00206 Lyase AYR56_RS05680 PF14698 Argininosuccinate lyase C-terminal AYR56_RS05690 PF03668 P-loop ATPase protein family AYR56_RS05695 PF01933 Uncharacterised protein family UPF0052 AYR56_RS05700 PF14527 WhiA LAGLIDADG-like domain AYR56_RS05700 PF02650 WhiA C-terminal HTH domain AYR56_RS05700 PF10298 WhiA N-terminal LAGLIDADG-like domain AYR56_RS05705 PF00574 Clp protease AYR56_RS05715 PF00309 Sigma-54 factor, Activator interacting domain (AID) AYR56_RS05715 PF04963 Sigma-54 factor, core binding domain AYR56_RS05715 PF04552 Sigma-54, DNA binding domain AYR56_RS05720 PF04198 Putative sugar-binding domain AYR56_RS05725 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AYR56_RS05725 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AYR56_RS05730 PF00162 Phosphoglycerate kinase AYR56_RS05735 PF00121 Triosephosphate isomerase AYR56_RS05740 PF03840 Preprotein translocase SecG subunit AYR56_RS05745 PF00773 RNB domain AYR56_RS05745 PF00575 S1 RNA binding domain AYR56_RS05745 PF08206 Ribonuclease B OB domain AYR56_RS05745 PF17876 Cold shock domain AYR56_RS05750 PF01668 SmpB protein AYR56_RS05755 PF00005 ABC transporter AYR56_RS05760 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS05780 PF03167 Uracil DNA glycosylase superfamily AYR56_RS05785 PF01515 Phosphate acetyl/butaryl transferase AYR56_RS05790 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AYR56_RS05795 PF13302 Acetyltransferase (GNAT) domain AYR56_RS05800 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AYR56_RS05800 PF14579 Helix-hairpin-helix motif AYR56_RS05800 PF07733 Bacterial DNA polymerase III alpha NTPase domain AYR56_RS05800 PF11490 DNA polymerase III polC-type N-terminus II AYR56_RS05800 PF00929 Exonuclease AYR56_RS05800 PF02811 PHP domain AYR56_RS05805 PF03372 Endonuclease/Exonuclease/phosphatase family AYR56_RS05810 PF01565 FAD binding domain AYR56_RS05810 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AYR56_RS05815 PF00999 Sodium/hydrogen exchanger family AYR56_RS05820 PF00107 Zinc-binding dehydrogenase AYR56_RS05820 PF08240 Alcohol dehydrogenase GroES-like domain AYR56_RS05825 PF00005 ABC transporter AYR56_RS05825 PF08402 TOBE domain AYR56_RS05830 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS05835 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS05840 PF13416 Bacterial extracellular solute-binding protein AYR56_RS05845 PF02457 DisA bacterial checkpoint controller nucleotide-binding AYR56_RS05855 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AYR56_RS05855 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AYR56_RS05855 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AYR56_RS05855 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AYR56_RS05860 PF01380 SIS domain AYR56_RS05865 PF01709 Transcriptional regulator AYR56_RS05870 PF00437 Type II/IV secretion system protein AYR56_RS05875 PF00482 Type II secretion system (T2SS), protein F AYR56_RS05880 PF07963 Prokaryotic N-terminal methylation motif AYR56_RS05905 PF02384 N-6 DNA Methylase AYR56_RS05910 PF00871 Acetokinase family AYR56_RS05920 PF00324 Amino acid permease AYR56_RS05970 PF06458 MucBP domain AYR56_RS06015 PF00486 Transcriptional regulatory protein, C terminal AYR56_RS06015 PF00072 Response regulator receiver domain AYR56_RS06020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR56_RS06020 PF00512 His Kinase A (phospho-acceptor) domain AYR56_RS06020 PF00672 HAMP domain AYR56_RS06040 PF00884 Sulfatase AYR56_RS06055 PF00342 Phosphoglucose isomerase AYR56_RS06065 PF01116 Fructose-bisphosphate aldolase class-II AYR56_RS06080 PF01712 Deoxynucleoside kinase AYR56_RS06085 PF00313 'Cold-shock' DNA-binding domain AYR56_RS06110 PF00005 ABC transporter AYR56_RS06110 PF00664 ABC transporter transmembrane region AYR56_RS06115 PF00664 ABC transporter transmembrane region AYR56_RS06115 PF00005 ABC transporter AYR56_RS06120 PF00144 Beta-lactamase AYR56_RS06120 PF11954 Domain of unknown function (DUF3471) AYR56_RS06125 PF01238 Phosphomannose isomerase type I AYR56_RS06130 PF08353 Domain of unknown function (DUF1727) AYR56_RS06130 PF08245 Mur ligase middle domain AYR56_RS06135 PF00265 Thymidine kinase AYR56_RS06140 PF03462 PCRF domain AYR56_RS06140 PF00472 RF-1 domain AYR56_RS06145 PF05175 Methyltransferase small domain AYR56_RS06145 PF17827 PrmC N-terminal domain AYR56_RS06150 PF03481 Putative GTP-binding controlling metal-binding AYR56_RS06150 PF01300 Telomere recombination AYR56_RS06155 PF00464 Serine hydroxymethyltransferase AYR56_RS06170 PF00119 ATP synthase A chain AYR56_RS06175 PF00137 ATP synthase subunit C AYR56_RS06180 PF00430 ATP synthase B/B' CF(0) AYR56_RS06185 PF00213 ATP synthase delta (OSCP) subunit AYR56_RS06190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AYR56_RS06190 PF00306 ATP synthase alpha/beta chain, C terminal domain AYR56_RS06190 PF02874 ATP synthase alpha/beta family, beta-barrel domain AYR56_RS06195 PF00231 ATP synthase AYR56_RS06200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AYR56_RS06200 PF02874 ATP synthase alpha/beta family, beta-barrel domain AYR56_RS06205 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AYR56_RS06205 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AYR56_RS06210 PF03050 Transposase IS66 family AYR56_RS06210 PF13007 Transposase C of IS166 homeodomain AYR56_RS06210 PF13817 IS66 C-terminal element AYR56_RS06210 PF13005 zinc-finger binding domain of transposase IS66 AYR56_RS06230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AYR56_RS06245 PF01809 Putative membrane protein insertion efficiency factor AYR56_RS06255 PF01098 Cell cycle protein AYR56_RS06260 PF00005 ABC transporter AYR56_RS06260 PF09383 NIL domain AYR56_RS06265 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS06270 PF03180 NLPA lipoprotein AYR56_RS06275 PF00005 ABC transporter AYR56_RS06280 PF01458 Uncharacterized protein family (UPF0051) AYR56_RS06285 PF00266 Aminotransferase class-V AYR56_RS06290 PF01592 NifU-like N terminal domain AYR56_RS06295 PF01458 Uncharacterized protein family (UPF0051) AYR56_RS06305 PF00456 Transketolase, thiamine diphosphate binding domain AYR56_RS06305 PF02780 Transketolase, C-terminal domain AYR56_RS06305 PF02779 Transketolase, pyrimidine binding domain AYR56_RS06310 PF08501 Shikimate dehydrogenase substrate binding domain AYR56_RS06310 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AYR56_RS06315 PF01817 Chorismate mutase type II AYR56_RS06315 PF00793 DAHP synthetase I family AYR56_RS06325 PF01817 Chorismate mutase type II AYR56_RS06325 PF00800 Prephenate dehydratase AYR56_RS06330 PF01161 Phosphatidylethanolamine-binding protein AYR56_RS06335 PF00696 Amino acid kinase family AYR56_RS06340 PF00171 Aldehyde dehydrogenase family AYR56_RS06345 PF04073 Aminoacyl-tRNA editing domain AYR56_RS06355 PF13419 Haloacid dehalogenase-like hydrolase AYR56_RS06365 PF01527 Transposase AYR56_RS06370 PF13333 Integrase core domain AYR56_RS06370 PF00665 Integrase core domain AYR56_RS06375 PF03976 Polyphosphate kinase 2 (PPK2) AYR56_RS06380 PF00582 Universal stress protein family AYR56_RS06395 PF12002 MgsA AAA+ ATPase C terminal AYR56_RS06395 PF05496 Holliday junction DNA helicase RuvB P-loop domain AYR56_RS06395 PF16193 AAA C-terminal domain AYR56_RS06400 PF18419 ATP-grasp-like domain AYR56_RS06400 PF02655 ATP-grasp domain AYR56_RS06400 PF04262 Glutamate-cysteine ligase AYR56_RS06410 PF06335 Protein of unknown function (DUF1054) AYR56_RS06415 PF01479 S4 domain AYR56_RS06415 PF00163 Ribosomal protein S4/S9 N-terminal domain AYR56_RS06420 PF13185 GAF domain AYR56_RS06425 PF06160 Septation ring formation regulator, EzrA AYR56_RS06430 PF00266 Aminotransferase class-V AYR56_RS06435 PF02926 THUMP domain AYR56_RS06435 PF02568 Thiamine biosynthesis protein (ThiI) AYR56_RS06440 PF00133 tRNA synthetases class I (I, L, M and V) AYR56_RS06440 PF10458 Valyl tRNA synthetase tRNA binding arm AYR56_RS06440 PF08264 Anticodon-binding domain of tRNA AYR56_RS06445 PF08245 Mur ligase middle domain AYR56_RS06445 PF02875 Mur ligase family, glutamate ligase domain AYR56_RS06450 PF13419 Haloacid dehalogenase-like hydrolase AYR56_RS06455 PF04002 RadC-like JAB domain AYR56_RS06460 PF00313 'Cold-shock' DNA-binding domain AYR56_RS06470 PF04085 rod shape-determining protein MreC AYR56_RS06480 PF03775 Septum formation inhibitor MinC, C-terminal domain AYR56_RS06485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AYR56_RS06490 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS06495 PF00005 ABC transporter AYR56_RS06500 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYR56_RS06510 PF09515 Thiamine transporter protein (Thia_YuaJ) AYR56_RS06525 PF02381 MraZ protein, putative antitoxin-like AYR56_RS06530 PF01795 MraW methylase family AYR56_RS06540 PF03793 PASTA domain AYR56_RS06540 PF00905 Penicillin binding protein transpeptidase domain AYR56_RS06540 PF03717 Penicillin-binding Protein dimerisation domain AYR56_RS06545 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AYR56_RS06545 PF00953 Glycosyl transferase family 4 AYR56_RS06550 PF08245 Mur ligase middle domain AYR56_RS06550 PF02875 Mur ligase family, glutamate ligase domain AYR56_RS06555 PF03033 Glycosyltransferase family 28 N-terminal domain AYR56_RS06555 PF04101 Glycosyltransferase family 28 C-terminal domain AYR56_RS06560 PF03799 Cell division protein FtsQ AYR56_RS06560 PF08478 POTRA domain, FtsQ-type AYR56_RS06565 PF02491 SHS2 domain inserted in FTSA AYR56_RS06565 PF11983 Membrane-attachment and polymerisation-promoting switch AYR56_RS06570 PF12327 FtsZ family, C-terminal domain AYR56_RS06570 PF00091 Tubulin/FtsZ family, GTPase domain AYR56_RS06575 PF01168 Alanine racemase, N-terminal domain AYR56_RS06580 PF04472 Cell division protein SepF AYR56_RS06590 PF17774 Putative RNA-binding domain in YlmH AYR56_RS06590 PF01479 S4 domain AYR56_RS06595 PF05103 DivIVA protein AYR56_RS06600 PF08264 Anticodon-binding domain of tRNA AYR56_RS06600 PF00133 tRNA synthetases class I (I, L, M and V) AYR56_RS06600 PF06827 Zinc finger found in FPG and IleRS AYR56_RS06605 PF01678 Diaminopimelate epimerase AYR56_RS06610 PF07690 Major Facilitator Superfamily AYR56_RS06615 PF05816 Toxic anion resistance protein (TelA) AYR56_RS06625 PF00293 NUDIX domain AYR56_RS06635 PF01048 Phosphorylase superfamily AYR56_RS06640 PF00266 Aminotransferase class-V AYR56_RS06655 PF00300 Histidine phosphatase superfamily (branch 1) AYR56_RS06665 PF13538 UvrD-like helicase C-terminal domain AYR56_RS06665 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AYR56_RS06665 PF14490 Helix-hairpin-helix containing domain AYR56_RS06670 PF00781 Diacylglycerol kinase catalytic domain AYR56_RS06675 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AYR56_RS06675 PF00753 Metallo-beta-lactamase superfamily AYR56_RS06675 PF17770 Ribonuclease J C-terminal domain AYR56_RS06680 PF07288 Protein of unknown function (DUF1447) AYR56_RS06690 PF01327 Polypeptide deformylase AYR56_RS06700 PF05256 Uncharacterised protein family (UPF0223) AYR56_RS06705 PF00459 Inositol monophosphatase family AYR56_RS06710 PF03144 Elongation factor Tu domain 2 AYR56_RS06710 PF14492 Elongation Factor G, domain II AYR56_RS06710 PF00679 Elongation factor G C-terminus AYR56_RS06710 PF00009 Elongation factor Tu GTP binding domain AYR56_RS06715 PF07408 Protein of unknown function (DUF1507) AYR56_RS06720 PF01098 Cell cycle protein AYR56_RS06725 PF00682 HMGL-like AYR56_RS06725 PF02436 Conserved carboxylase domain AYR56_RS06725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYR56_RS06725 PF00364 Biotin-requiring enzyme AYR56_RS06725 PF02785 Biotin carboxylase C-terminal domain AYR56_RS06725 PF00289 Biotin carboxylase, N-terminal domain AYR56_RS06735 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) AYR56_RS06745 PF01467 Cytidylyltransferase-like AYR56_RS06750 PF05362 Lon protease (S16) C-terminal proteolytic domain AYR56_RS06750 PF13180 PDZ domain AYR56_RS06760 PF10531 SLBB domain AYR56_RS06765 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AYR56_RS06770 PF00753 Metallo-beta-lactamase superfamily AYR56_RS06770 PF13567 Domain of unknown function (DUF4131) AYR56_RS06770 PF03772 Competence protein AYR56_RS06775 PF06144 DNA polymerase III, delta subunit AYR56_RS06785 PF01649 Ribosomal protein S20 AYR56_RS06790 PF00312 Ribosomal protein S15 AYR56_RS06795 PF00701 Dihydrodipicolinate synthetase family AYR56_RS06800 PF00753 Metallo-beta-lactamase superfamily AYR56_RS06800 PF17770 Ribonuclease J C-terminal domain AYR56_RS06800 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AYR56_RS06810 PF00009 Elongation factor Tu GTP binding domain AYR56_RS06810 PF03144 Elongation factor Tu domain 2 AYR56_RS06810 PF03143 Elongation factor Tu C-terminal domain AYR56_RS06815 PF05697 Bacterial trigger factor protein (TF) AYR56_RS06815 PF05698 Bacterial trigger factor protein (TF) C-terminus AYR56_RS06815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYR56_RS06820 PF07724 AAA domain (Cdc48 subfamily) AYR56_RS06820 PF10431 C-terminal, D2-small domain, of ClpB protein AYR56_RS06820 PF06689 ClpX C4-type zinc finger AYR56_RS06825 PF01926 50S ribosome-binding GTPase AYR56_RS06845 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS06850 PF00005 ABC transporter AYR56_RS06855 PF02151 UvrB/uvrC motif AYR56_RS06855 PF01541 GIY-YIG catalytic domain AYR56_RS06855 PF08459 UvrC Helix-hairpin-helix N-terminal AYR56_RS06865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AYR56_RS06865 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AYR56_RS06870 PF00294 pfkB family carbohydrate kinase AYR56_RS06875 PF00455 DeoR C terminal sensor domain AYR56_RS06875 PF08220 DeoR-like helix-turn-helix domain AYR56_RS06880 PF09269 Domain of unknown function (DUF1967) AYR56_RS06880 PF01926 50S ribosome-binding GTPase AYR56_RS06880 PF01018 GTP1/OBG AYR56_RS06885 PF01757 Acyltransferase family AYR56_RS06890 PF00753 Metallo-beta-lactamase superfamily AYR56_RS06890 PF12706 Beta-lactamase superfamily domain AYR56_RS06895 PF00106 short chain dehydrogenase AYR56_RS06900 PF06305 Lipopolysaccharide assembly protein A domain AYR56_RS06905 PF02272 DHHA1 domain AYR56_RS06905 PF17768 RecJ OB domain AYR56_RS06905 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AYR56_RS06905 PF01368 DHH family AYR56_RS06910 PF00156 Phosphoribosyl transferase domain AYR56_RS06920 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AYR56_RS06920 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AYR56_RS06920 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal AYR56_RS06930 PF00171 Aldehyde dehydrogenase family AYR56_RS06980 PF00829 Ribosomal prokaryotic L21 protein AYR56_RS06990 PF01016 Ribosomal L27 protein AYR56_RS06995 PF01321 Creatinase/Prolidase N-terminal domain AYR56_RS06995 PF00557 Metallopeptidase family M24 AYR56_RS07000 PF08207 Elongation factor P (EF-P) KOW-like domain AYR56_RS07000 PF09285 Elongation factor P, C-terminal AYR56_RS07000 PF01132 Elongation factor P (EF-P) OB domain AYR56_RS07005 PF03780 Asp23 family, cell envelope-related function AYR56_RS07010 PF01029 NusB family AYR56_RS07015 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AYR56_RS07015 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AYR56_RS07020 PF13742 OB-fold nucleic acid binding domain AYR56_RS07020 PF02601 Exonuclease VII, large subunit AYR56_RS07025 PF02609 Exonuclease VII small subunit AYR56_RS07030 PF00348 Polyprenyl synthetase AYR56_RS07035 PF01479 S4 domain AYR56_RS07035 PF01728 FtsJ-like methyltransferase AYR56_RS07040 PF02863 Arginine repressor, C-terminal domain AYR56_RS07040 PF01316 Arginine repressor, DNA binding domain AYR56_RS07045 PF02463 RecF/RecN/SMC N terminal domain AYR56_RS07060 PF00625 Guanylate kinase AYR56_RS07065 PF01192 RNA polymerase Rpb6 AYR56_RS07070 PF04127 DNA / pantothenate metabolism flavoprotein AYR56_RS07070 PF02441 Flavoprotein AYR56_RS07075 PF17764 3′ DNA-binding domain (3′BD) AYR56_RS07075 PF18074 Primosomal protein N C-terminal domain AYR56_RS07075 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AYR56_RS07075 PF04851 Type III restriction enzyme, res subunit AYR56_RS07075 PF00271 Helicase conserved C-terminal domain AYR56_RS07080 PF00551 Formyl transferase AYR56_RS07080 PF02911 Formyl transferase, C-terminal domain AYR56_RS07085 PF01189 16S rRNA methyltransferase RsmB/F AYR56_RS07085 PF01029 NusB family AYR56_RS07095 PF03793 PASTA domain AYR56_RS07095 PF00069 Protein kinase domain AYR56_RS07100 PF03193 RsgA GTPase AYR56_RS07100 PF16745 RsgA N-terminal domain AYR56_RS07105 PF00834 Ribulose-phosphate 3 epimerase family AYR56_RS07115 PF00830 Ribosomal L28 family AYR56_RS07120 PF00582 Universal stress protein family AYR56_RS07125 PF03780 Asp23 family, cell envelope-related function AYR56_RS07130 PF13684 Dihydroxyacetone kinase family AYR56_RS07130 PF02734 DAK2 domain AYR56_RS07135 PF00270 DEAD/DEAH box helicase AYR56_RS07135 PF17191 RecG wedge domain AYR56_RS07135 PF00271 Helicase conserved C-terminal domain AYR56_RS07140 PF02504 Fatty acid synthesis protein AYR56_RS07145 PF00550 Phosphopantetheine attachment site AYR56_RS07150 PF14622 Ribonuclease-III-like AYR56_RS07150 PF00035 Double-stranded RNA binding motif AYR56_RS07155 PF02463 RecF/RecN/SMC N terminal domain AYR56_RS07155 PF06470 SMC proteins Flexible Hinge Domain AYR56_RS07165 PF02881 SRP54-type protein, helical bundle domain AYR56_RS07165 PF00448 SRP54-type protein, GTPase domain AYR56_RS07175 PF04297 Putative helix-turn-helix protein, YlxM / p13 like AYR56_RS07180 PF00448 SRP54-type protein, GTPase domain AYR56_RS07180 PF02978 Signal peptide binding domain AYR56_RS07180 PF02881 SRP54-type protein, helical bundle domain AYR56_RS07185 PF07690 Major Facilitator Superfamily AYR56_RS07220 PF12464 Maltose acetyltransferase AYR56_RS07220 PF00132 Bacterial transferase hexapeptide (six repeats) AYR56_RS07235 PF08240 Alcohol dehydrogenase GroES-like domain AYR56_RS07235 PF00107 Zinc-binding dehydrogenase AYR56_RS07245 PF00886 Ribosomal protein S16 AYR56_RS07255 PF01782 RimM N-terminal domain AYR56_RS07255 PF05239 PRC-barrel domain AYR56_RS07260 PF01746 tRNA (Guanine-1)-methyltransferase AYR56_RS07270 PF01245 Ribosomal protein L19 AYR56_RS07285 PF00149 Calcineurin-like phosphoesterase AYR56_RS07285 PF02872 5'-nucleotidase, C-terminal domain AYR56_RS07295 PF06736 Protein of unknown function (DUF1211) AYR56_RS07305 PF13520 Amino acid permease AYR56_RS07310 PF03577 Peptidase family C69 AYR56_RS07315 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AYR56_RS07315 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AYR56_RS07320 PF13936 Helix-turn-helix domain AYR56_RS07325 PF01361 Tautomerase enzyme AYR56_RS07330 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AYR56_RS07330 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AYR56_RS07335 PF01527 Transposase AYR56_RS07340 PF00665 Integrase core domain AYR56_RS07340 PF13333 Integrase core domain AYR56_RS07350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYR56_RS07350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYR56_RS07385 PF03050 Transposase IS66 family AYR56_RS07385 PF13817 IS66 C-terminal element AYR56_RS07385 PF13007 Transposase C of IS166 homeodomain AYR56_RS07385 PF13005 zinc-finger binding domain of transposase IS66 AYR56_RS07390 PF03883 Peroxide stress protein YaaA AYR56_RS07395 PF00772 DnaB-like helicase N terminal domain AYR56_RS07395 PF03796 DnaB-like helicase C terminal domain AYR56_RS07410 PF00881 Nitroreductase family AYR56_RS07420 PF00817 impB/mucB/samB family AYR56_RS07420 PF11799 impB/mucB/samB family C-terminal domain AYR56_RS07420 PF11798 IMS family HHH motif AYR56_RS07430 PF00872 Transposase, Mutator family AYR56_RS07440 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AYR56_RS07440 PF12008 Type I restriction and modification enzyme - subunit R C terminal AYR56_RS07440 PF18766 SWI2/SNF2 ATPase AYR56_RS07445 PF02384 N-6 DNA Methylase AYR56_RS07445 PF12161 HsdM N-terminal domain AYR56_RS07460 PF00665 Integrase core domain AYR56_RS07460 PF13276 HTH-like domain AYR56_RS07460 PF13333 Integrase core domain AYR56_RS07465 PF01527 Transposase AYR56_RS07500 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AYR56_RS07500 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AYR56_RS07505 PF05173 Dihydrodipicolinate reductase, C-terminus AYR56_RS07505 PF01113 Dihydrodipicolinate reductase, N-terminus AYR56_RS07510 PF01743 Poly A polymerase head domain AYR56_RS07510 PF13735 tRNA nucleotidyltransferase domain 2 putative AYR56_RS07510 PF12627 Probable RNA and SrmB- binding site of polymerase A AYR56_RS07515 PF12848 ABC transporter AYR56_RS07515 PF16326 ABC transporter C-terminal domain AYR56_RS07515 PF00005 ABC transporter AYR56_RS07520 PF00303 Thymidylate synthase AYR56_RS07525 PF00186 Dihydrofolate reductase AYR56_RS07530 PF03006 Haemolysin-III related AYR56_RS07535 PF02645 Uncharacterised protein, DegV family COG1307 AYR56_RS07540 PF13472 GDSL-like Lipase/Acylhydrolase family AYR56_RS07545 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) AYR56_RS07550 PF06855 YozE SAM-like fold AYR56_RS07555 PF01471 Putative peptidoglycan binding domain AYR56_RS07555 PF17820 PDZ domain AYR56_RS07555 PF03572 Peptidase family S41 AYR56_RS07560 PF02896 PEP-utilising enzyme, TIM barrel domain AYR56_RS07560 PF00391 PEP-utilising enzyme, mobile domain AYR56_RS07560 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AYR56_RS07570 PF00106 short chain dehydrogenase AYR56_RS07580 PF01926 50S ribosome-binding GTPase AYR56_RS07585 PF01351 Ribonuclease HII AYR56_RS07590 PF18255 DNA processing protein A sterile alpha motif domain AYR56_RS07590 PF02481 DNA recombination-mediator protein A AYR56_RS07595 PF01131 DNA topoisomerase AYR56_RS07595 PF01751 Toprim domain AYR56_RS07595 PF01396 Topoisomerase DNA binding C4 zinc finger AYR56_RS07600 PF01134 Glucose inhibited division protein A AYR56_RS07605 PF02899 Phage integrase, N-terminal SAM-like domain AYR56_RS07605 PF00589 Phage integrase family AYR56_RS07610 PF00227 Proteasome subunit AYR56_RS07615 PF10431 C-terminal, D2-small domain, of ClpB protein AYR56_RS07615 PF00004 ATPase family associated with various cellular activities (AAA) AYR56_RS07615 PF07724 AAA domain (Cdc48 subfamily) AYR56_RS07625 PF02660 Glycerol-3-phosphate acyltransferase AYR56_RS07630 PF00204 DNA gyrase B AYR56_RS07630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR56_RS07630 PF00986 DNA gyrase B subunit, carboxyl terminus AYR56_RS07630 PF01751 Toprim domain AYR56_RS07635 PF00521 DNA gyrase/topoisomerase IV, subunit A AYR56_RS07635 PF03989 DNA gyrase C-terminal domain, beta-propeller AYR56_RS07640 PF02901 Pyruvate formate lyase-like AYR56_RS07640 PF01228 Glycine radical AYR56_RS07645 PF04055 Radical SAM superfamily AYR56_RS07655 PF03466 LysR substrate binding domain AYR56_RS07655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR56_RS07660 PF02833 DHHA2 domain AYR56_RS07660 PF01368 DHH family AYR56_RS07665 PF00330 Aconitase family (aconitate hydratase) AYR56_RS07665 PF00694 Aconitase C-terminal domain AYR56_RS07670 PF00285 Citrate synthase, C-terminal domain AYR56_RS07675 PF00056 lactate/malate dehydrogenase, NAD binding domain AYR56_RS07675 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AYR56_RS07685 PF05670 NFACT protein RNA binding domain AYR56_RS07700 PF00156 Phosphoribosyl transferase domain AYR56_RS07705 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AYR56_RS07710 PF02142 MGS-like domain AYR56_RS07710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYR56_RS07710 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AYR56_RS07715 PF00117 Glutamine amidotransferase class-I AYR56_RS07715 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AYR56_RS07720 PF01979 Amidohydrolase family AYR56_RS07725 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AYR56_RS07725 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AYR56_RS07730 PF00860 Permease family AYR56_RS07735 PF00156 Phosphoribosyl transferase domain AYR56_RS07740 PF00849 RNA pseudouridylate synthase AYR56_RS07740 PF01479 S4 domain AYR56_RS07745 PF01252 Signal peptidase (SPase) II AYR56_RS07750 PF03167 Uracil DNA glycosylase superfamily AYR56_RS07755 PF01268 Formate--tetrahydrofolate ligase AYR56_RS07760 PF00313 'Cold-shock' DNA-binding domain AYR56_RS07765 PF17255 EbsA-like protein AYR56_RS07770 PF13456 Reverse transcriptase-like AYR56_RS07790 PF13333 Integrase core domain AYR56_RS07790 PF00665 Integrase core domain AYR56_RS07790 PF13276 HTH-like domain AYR56_RS07805 PF02926 THUMP domain AYR56_RS07805 PF01170 Putative RNA methylase family UPF0020 AYR56_RS07815 PF05103 DivIVA protein AYR56_RS07820 PF06908 YspA SLOG family AYR56_RS07825 PF03838 Recombination protein U AYR56_RS07830 PF00905 Penicillin binding protein transpeptidase domain AYR56_RS07830 PF00912 Transglycosylase AYR56_RS07835 PF00730 HhH-GPD superfamily base excision DNA repair protein AYR56_RS07835 PF10576 Iron-sulfur binding domain of endonuclease III AYR56_RS07835 PF00633 Helix-hairpin-helix motif AYR56_RS07845 PF01336 OB-fold nucleic acid binding domain AYR56_RS07845 PF00152 tRNA synthetases class II (D, K and N) AYR56_RS07850 PF00155 Aminotransferase class I and II AYR56_RS07860 PF00929 Exonuclease AYR56_RS07860 PF04851 Type III restriction enzyme, res subunit AYR56_RS07860 PF13307 Helicase C-terminal domain AYR56_RS07865 PF00288 GHMP kinases N terminal domain AYR56_RS07865 PF08544 GHMP kinases C terminal AYR56_RS07865 PF10509 Galactokinase galactose-binding signature AYR56_RS07875 PF08544 GHMP kinases C terminal AYR56_RS07875 PF00288 GHMP kinases N terminal domain AYR56_RS07880 PF01070 FMN-dependent dehydrogenase AYR56_RS07885 PF17126 RsmF rRNA methyltransferase first C-terminal domain AYR56_RS07885 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AYR56_RS07885 PF01189 16S rRNA methyltransferase RsmB/F AYR56_RS07900 PF01883 Iron-sulfur cluster assembly protein AYR56_RS07905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AYR56_RS07905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AYR56_RS07910 PF00155 Aminotransferase class I and II AYR56_RS07910 PF00392 Bacterial regulatory proteins, gntR family AYR56_RS07920 PF00005 ABC transporter AYR56_RS07925 PF07702 UTRA domain AYR56_RS07925 PF00392 Bacterial regulatory proteins, gntR family AYR56_RS07950 PF00375 Sodium:dicarboxylate symporter family AYR56_RS08000 PF13460 NAD(P)H-binding AYR56_RS08020 PF08240 Alcohol dehydrogenase GroES-like domain AYR56_RS08020 PF08659 KR domain AYR56_RS08020 PF00550 Phosphopantetheine attachment site AYR56_RS08020 PF00698 Acyl transferase domain AYR56_RS08020 PF14765 Polyketide synthase dehydratase AYR56_RS08030 PF00206 Lyase AYR56_RS08030 PF02655 ATP-grasp domain AYR56_RS08040 PF03358 NADPH-dependent FMN reductase AYR56_RS08050 PF00561 alpha/beta hydrolase fold AYR56_RS08055 PF13276 HTH-like domain AYR56_RS08055 PF00665 Integrase core domain AYR56_RS08055 PF13333 Integrase core domain AYR56_RS08060 PF01527 Transposase AYR56_RS08065 PF07690 Major Facilitator Superfamily AYR56_RS08070 PF02615 Malate/L-lactate dehydrogenase AYR56_RS08085 PF00216 Bacterial DNA-binding protein AYR56_RS08090 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AYR56_RS08090 PF01926 50S ribosome-binding GTPase AYR56_RS08095 PF00575 S1 RNA binding domain AYR56_RS08100 PF02224 Cytidylate kinase AYR56_RS08110 PF00270 DEAD/DEAH box helicase AYR56_RS08110 PF00271 Helicase conserved C-terminal domain AYR56_RS08125 PF01479 S4 domain AYR56_RS08125 PF00849 RNA pseudouridylate synthase AYR56_RS08130 PF04079 Segregation and condensation complex subunit ScpB AYR56_RS08135 PF02616 Segregation and condensation protein ScpA AYR56_RS08140 PF00583 Acetyltransferase (GNAT) family AYR56_RS08145 PF02899 Phage integrase, N-terminal SAM-like domain AYR56_RS08145 PF00589 Phage integrase family AYR56_RS08150 PF01475 Ferric uptake regulator family AYR56_RS08155 PF13509 S1 domain AYR56_RS08155 PF17783 CvfB-like winged helix domain AYR56_RS08160 PF04284 Protein of unknown function (DUF441) AYR56_RS08165 PF02887 Pyruvate kinase, alpha/beta domain AYR56_RS08165 PF00224 Pyruvate kinase, barrel domain AYR56_RS08165 PF00391 PEP-utilising enzyme, mobile domain AYR56_RS08170 PF00365 Phosphofructokinase AYR56_RS08175 PF01336 OB-fold nucleic acid binding domain AYR56_RS08175 PF02811 PHP domain AYR56_RS08175 PF14579 Helix-hairpin-helix motif AYR56_RS08175 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AYR56_RS08175 PF07733 Bacterial DNA polymerase III alpha NTPase domain AYR56_RS08185 PF17871 AAA lid domain AYR56_RS08185 PF07724 AAA domain (Cdc48 subfamily) AYR56_RS08185 PF10431 C-terminal, D2-small domain, of ClpB protein AYR56_RS08185 PF02861 Clp amino terminal domain, pathogenicity island component AYR56_RS08185 PF00004 ATPase family associated with various cellular activities (AAA) AYR56_RS08190 PF07687 Peptidase dimerisation domain AYR56_RS08190 PF01546 Peptidase family M20/M25/M40 AYR56_RS08195 PF01784 NIF3 (NGG1p interacting factor 3) AYR56_RS08205 PF03979 Sigma-70 factor, region 1.1 AYR56_RS08205 PF00140 Sigma-70 factor, region 1.2 AYR56_RS08205 PF04542 Sigma-70 region 2 AYR56_RS08205 PF04539 Sigma-70 region 3 AYR56_RS08205 PF04545 Sigma-70, region 4 AYR56_RS08210 PF01807 CHC2 zinc finger AYR56_RS08210 PF08275 DNA primase catalytic core, N-terminal domain AYR56_RS08210 PF10410 DnaB-helicase binding domain of primase AYR56_RS08215 PF02092 Glycyl-tRNA synthetase beta subunit AYR56_RS08220 PF02091 Glycyl-tRNA synthetase alpha subunit AYR56_RS08225 PF02565 Recombination protein O C terminal AYR56_RS08225 PF11967 Recombination protein O N terminal AYR56_RS08230 PF01926 50S ribosome-binding GTPase AYR56_RS08230 PF07650 KH domain AYR56_RS08235 PF01219 Prokaryotic diacylglycerol kinase AYR56_RS08240 PF02130 Uncharacterized protein family UPF0054 AYR56_RS08245 PF02562 PhoH-like protein AYR56_RS08250 PF09424 Yqey-like protein AYR56_RS08255 PF01165 Ribosomal protein S21 AYR56_RS08260 PF03618 Kinase/pyrophosphorylase AYR56_RS08265 PF01261 Xylose isomerase-like TIM barrel AYR56_RS08270 PF00881 Nitroreductase family AYR56_RS08275 PF05525 Branched-chain amino acid transport protein AYR56_RS08280 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AYR56_RS08280 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AYR56_RS08285 PF01625 Peptide methionine sulfoxide reductase AYR56_RS08290 PF01641 SelR domain AYR56_RS08310 PF13005 zinc-finger binding domain of transposase IS66 AYR56_RS08310 PF03050 Transposase IS66 family AYR56_RS08310 PF13007 Transposase C of IS166 homeodomain AYR56_RS08310 PF13817 IS66 C-terminal element AYR56_RS08315 PF00152 tRNA synthetases class II (D, K and N) AYR56_RS08315 PF01336 OB-fold nucleic acid binding domain AYR56_RS08315 PF02938 GAD domain AYR56_RS08320 PF03129 Anticodon binding domain AYR56_RS08320 PF13393 Histidyl-tRNA synthetase AYR56_RS08325 PF08239 Bacterial SH3 domain AYR56_RS08325 PF01520 N-acetylmuramoyl-L-alanine amidase AYR56_RS08330 PF13007 Transposase C of IS166 homeodomain AYR56_RS08330 PF13817 IS66 C-terminal element AYR56_RS08330 PF03050 Transposase IS66 family AYR56_RS08330 PF13005 zinc-finger binding domain of transposase IS66 AYR56_RS08355 PF13419 Haloacid dehalogenase-like hydrolase AYR56_RS08360 PF02580 D-Tyr-tRNA(Tyr) deacylase AYR56_RS08365 PF02824 TGS domain AYR56_RS08365 PF04607 Region found in RelA / SpoT proteins AYR56_RS08365 PF13291 ACT domain AYR56_RS08375 PF04452 RNA methyltransferase AYR56_RS08390 PF02245 Methylpurine-DNA glycosylase (MPG) AYR56_RS08405 PF01527 Transposase AYR56_RS08410 PF13333 Integrase core domain AYR56_RS08410 PF00665 Integrase core domain AYR56_RS08410 PF13276 HTH-like domain AYR56_RS08415 PF02424 ApbE family AYR56_RS08425 PF00849 RNA pseudouridylate synthase AYR56_RS08430 PF01476 LysM domain AYR56_RS08430 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AYR56_RS08435 PF00872 Transposase, Mutator family AYR56_RS08440 PF00009 Elongation factor Tu GTP binding domain AYR56_RS08440 PF03144 Elongation factor Tu domain 2 AYR56_RS08440 PF06421 GTP-binding protein LepA C-terminus AYR56_RS08440 PF00679 Elongation factor G C-terminus AYR56_RS08445 PF00684 DnaJ central domain AYR56_RS08445 PF00226 DnaJ domain AYR56_RS08445 PF01556 DnaJ C terminal domain AYR56_RS08450 PF00012 Hsp70 protein AYR56_RS08455 PF01025 GrpE AYR56_RS08460 PF01628 HrcA protein C terminal domain AYR56_RS08460 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AYR56_RS08475 PF13005 zinc-finger binding domain of transposase IS66 AYR56_RS08475 PF13817 IS66 C-terminal element AYR56_RS08475 PF03050 Transposase IS66 family AYR56_RS08475 PF13007 Transposase C of IS166 homeodomain AYR56_RS08485 PF06969 HemN C-terminal domain AYR56_RS08485 PF04055 Radical SAM superfamily AYR56_RS08490 PF06574 FAD synthetase AYR56_RS08490 PF01687 Riboflavin kinase AYR56_RS08495 PF01509 TruB family pseudouridylate synthase (N terminal domain) AYR56_RS08495 PF16198 tRNA pseudouridylate synthase B C-terminal domain AYR56_RS08500 PF02033 Ribosome-binding factor A AYR56_RS08505 PF00009 Elongation factor Tu GTP binding domain AYR56_RS08505 PF04760 Translation initiation factor IF-2, N-terminal region AYR56_RS08505 PF11987 Translation-initiation factor 2 AYR56_RS08510 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AYR56_RS08515 PF04296 Protein of unknown function (DUF448) AYR56_RS08520 PF00575 S1 RNA binding domain AYR56_RS08520 PF08529 NusA N-terminal domain AYR56_RS08520 PF13184 NusA-like KH domain AYR56_RS08525 PF02576 RimP N-terminal domain AYR56_RS08525 PF17384 RimP C-terminal SH3 domain AYR56_RS08530 PF00929 Exonuclease AYR56_RS08530 PF02811 PHP domain AYR56_RS08530 PF14480 DNA polymerase III polC-type N-terminus I AYR56_RS08530 PF14579 Helix-hairpin-helix motif AYR56_RS08530 PF11490 DNA polymerase III polC-type N-terminus II AYR56_RS08530 PF07733 Bacterial DNA polymerase III alpha NTPase domain AYR56_RS08530 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AYR56_RS08535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYR56_RS08535 PF04073 Aminoacyl-tRNA editing domain AYR56_RS08535 PF03129 Anticodon binding domain AYR56_RS08540 PF02163 Peptidase family M50 AYR56_RS08540 PF17820 PDZ domain AYR56_RS08550 PF01255 Putative undecaprenyl diphosphate synthase AYR56_RS08555 PF01765 Ribosome recycling factor AYR56_RS08560 PF00696 Amino acid kinase family AYR56_RS08565 PF00889 Elongation factor TS AYR56_RS08570 PF00318 Ribosomal protein S2 AYR56_RS08575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYR56_RS08575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYR56_RS08580 PF01541 GIY-YIG catalytic domain AYR56_RS08585 PF05175 Methyltransferase small domain AYR56_RS08590 PF01553 Acyltransferase AYR56_RS08595 PF03672 Uncharacterised protein family (UPF0154) AYR56_RS08600 PF05979 Bacterial protein of unknown function (DUF896) AYR56_RS08605 PF00717 Peptidase S24-like AYR56_RS08605 PF01726 LexA DNA binding domain AYR56_RS08640 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal AYR56_RS08640 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal AYR56_RS08650 PF03951 Glutamine synthetase, beta-Grasp domain AYR56_RS08650 PF00120 Glutamine synthetase, catalytic domain AYR56_RS08655 PF13411 MerR HTH family regulatory protein AYR56_RS08660 PF06838 Methionine gamma-lyase AYR56_RS08670 PF03009 Glycerophosphoryl diester phosphodiesterase family AYR56_RS08675 PF00581 Rhodanese-like domain AYR56_RS08680 PF00480 ROK family AYR56_RS08690 PF00480 ROK family AYR56_RS08700 PF01694 Rhomboid family AYR56_RS08705 PF01812 5-formyltetrahydrofolate cyclo-ligase family AYR56_RS08715 PF03734 L,D-transpeptidase catalytic domain AYR56_RS08720 PF13476 AAA domain AYR56_RS08725 PF12320 Type 5 capsule protein repressor C-terminal domain AYR56_RS08725 PF00149 Calcineurin-like phosphoesterase AYR56_RS08735 PF03717 Penicillin-binding Protein dimerisation domain AYR56_RS08735 PF00905 Penicillin binding protein transpeptidase domain AYR56_RS08740 PF09586 Bacterial membrane protein YfhO AYR56_RS08745 PF00196 Bacterial regulatory proteins, luxR family AYR56_RS08745 PF00072 Response regulator receiver domain AYR56_RS08750 PF07730 Histidine kinase AYR56_RS08750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR56_RS08750 PF00672 HAMP domain AYR56_RS08760 PF03449 Transcription elongation factor, N-terminal AYR56_RS08760 PF01272 Transcription elongation factor, GreA/GreB, C-term AYR56_RS08765 PF00485 Phosphoribulokinase / Uridine kinase family AYR56_RS08770 PF02618 YceG-like family AYR56_RS08775 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AYR56_RS08775 PF01588 Putative tRNA binding domain AYR56_RS08775 PF03147 Ferredoxin-fold anticodon binding domain AYR56_RS08775 PF03484 tRNA synthetase B5 domain AYR56_RS08775 PF03483 B3/4 domain AYR56_RS08780 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AYR56_RS08780 PF01409 tRNA synthetases class II core domain (F) AYR56_RS08785 PF01638 HxlR-like helix-turn-helix AYR56_RS08795 PF08032 RNA 2'-O ribose methyltransferase substrate binding AYR56_RS08795 PF00588 SpoU rRNA Methylase family AYR56_RS08800 PF00708 Acylphosphatase AYR56_RS08805 PF02096 60Kd inner membrane protein AYR56_RS08810 PF00512 His Kinase A (phospho-acceptor) domain AYR56_RS08810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR56_RS08810 PF18719 ArlS sensor domain AYR56_RS08815 PF00486 Transcriptional regulatory protein, C terminal AYR56_RS08815 PF00072 Response regulator receiver domain AYR56_RS08820 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AYR56_RS08820 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AYR56_RS08835 PF05636 HIGH Nucleotidyl Transferase AYR56_RS08840 PF13649 Methyltransferase domain AYR56_RS08850 PF01966 HD domain AYR56_RS08855 PF01467 Cytidylyltransferase-like AYR56_RS08865 PF01926 50S ribosome-binding GTPase AYR56_RS08875 PF00107 Zinc-binding dehydrogenase AYR56_RS08875 PF08240 Alcohol dehydrogenase GroES-like domain AYR56_RS08880 PF00453 Ribosomal protein L20 AYR56_RS08885 PF01632 Ribosomal protein L35 AYR56_RS08890 PF05198 Translation initiation factor IF-3, N-terminal domain AYR56_RS08890 PF00707 Translation initiation factor IF-3, C-terminal domain AYR56_RS08895 PF03129 Anticodon binding domain AYR56_RS08895 PF02824 TGS domain AYR56_RS08895 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYR56_RS08900 PF01695 IstB-like ATP binding protein AYR56_RS08900 PF07319 Primosomal protein DnaI N-terminus AYR56_RS08905 PF07261 Replication initiation and membrane attachment AYR56_RS08910 PF03477 ATP cone domain AYR56_RS08915 PF01121 Dephospho-CoA kinase AYR56_RS08920 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AYR56_RS08920 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AYR56_RS08920 PF06827 Zinc finger found in FPG and IleRS AYR56_RS08925 PF01367 5'-3' exonuclease, C-terminal SAM fold AYR56_RS08925 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AYR56_RS08925 PF00476 DNA polymerase family A AYR56_RS08930 PF01027 Inhibitor of apoptosis-promoting Bax1 AYR56_RS08935 PF01225 Mur ligase family, catalytic domain AYR56_RS08935 PF08245 Mur ligase middle domain AYR56_RS08935 PF02875 Mur ligase family, glutamate ligase domain AYR56_RS08940 PF01580 FtsK/SpoIIIE family AYR56_RS08940 PF17854 FtsK alpha domain AYR56_RS08940 PF09397 Ftsk gamma domain AYR56_RS08945 PF01588 Putative tRNA binding domain AYR56_RS08945 PF14794 Domain of unknown function (DUF4479) AYR56_RS08950 PF00582 Universal stress protein family AYR56_RS08960 PF02390 Putative methyltransferase AYR56_RS08965 PF01636 Phosphotransferase enzyme family AYR56_RS08975 PF00005 ABC transporter AYR56_RS08980 PF01230 HIT domain AYR56_RS09005 PF01966 HD domain AYR56_RS09010 PF13514 AAA domain AYR56_RS09015 PF00149 Calcineurin-like phosphoesterase AYR56_RS09020 PF06133 Control of competence regulator ComK, YlbF/YmcA AYR56_RS09025 PF00912 Transglycosylase AYR56_RS09025 PF00905 Penicillin binding protein transpeptidase domain AYR56_RS09030 PF00849 RNA pseudouridylate synthase AYR56_RS09035 PF02863 Arginine repressor, C-terminal domain AYR56_RS09035 PF01316 Arginine repressor, DNA binding domain AYR56_RS09040 PF03485 Arginyl tRNA synthetase N terminal domain AYR56_RS09040 PF05746 DALR anticodon binding domain AYR56_RS09040 PF00750 tRNA synthetases class I (R) AYR56_RS09065 PF01256 Carbohydrate kinase AYR56_RS09070 PF01479 S4 domain AYR56_RS09070 PF00849 RNA pseudouridylate synthase AYR56_RS09075 PF01943 Polysaccharide biosynthesis protein AYR56_RS09075 PF14667 Polysaccharide biosynthesis C-terminal domain AYR56_RS09080 PF13603 Leucyl-tRNA synthetase, Domain 2 AYR56_RS09080 PF09334 tRNA synthetases class I (M) AYR56_RS09080 PF08264 Anticodon-binding domain of tRNA AYR56_RS09080 PF00133 tRNA synthetases class I (I, L, M and V) AYR56_RS09085 PF01569 PAP2 superfamily AYR56_RS09090 PF07690 Major Facilitator Superfamily AYR56_RS09095 PF00438 S-adenosylmethionine synthetase, N-terminal domain AYR56_RS09095 PF02772 S-adenosylmethionine synthetase, central domain AYR56_RS09095 PF02773 S-adenosylmethionine synthetase, C-terminal domain AYR56_RS09230 PF00575 S1 RNA binding domain AYR56_RS09235 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AYR56_RS09240 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR56_RS09245 PF04608 Phosphatidylglycerophosphatase A AYR56_RS09250 PF09335 SNARE associated Golgi protein AYR56_RS09265 PF13344 Haloacid dehalogenase-like hydrolase AYR56_RS09270 PF06265 Protein of unknown function (DUF1027) AYR56_RS09275 PF02872 5'-nucleotidase, C-terminal domain AYR56_RS09290 PF00375 Sodium:dicarboxylate symporter family AYR56_RS09315 PF01156 Inosine-uridine preferring nucleoside hydrolase AYR56_RS09320 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AYR56_RS09325 PF01156 Inosine-uridine preferring nucleoside hydrolase AYR56_RS09330 PF01773 Na+ dependent nucleoside transporter N-terminus AYR56_RS09330 PF07662 Na+ dependent nucleoside transporter C-terminus AYR56_RS09345 PF01022 Bacterial regulatory protein, arsR family AYR56_RS09350 PF01966 HD domain AYR56_RS09355 PF01546 Peptidase family M20/M25/M40 AYR56_RS09360 PF00665 Integrase core domain AYR56_RS09360 PF13333 Integrase core domain AYR56_RS09365 PF01527 Transposase AYR56_RS09385 PF03099 Biotin/lipoate A/B protein ligase family AYR56_RS09385 PF08279 HTH domain AYR56_RS09385 PF02237 Biotin protein ligase C terminal domain AYR56_RS09390 PF02632 BioY family AYR56_RS09400 PF13419 Haloacid dehalogenase-like hydrolase AYR56_RS09405 PF00905 Penicillin binding protein transpeptidase domain AYR56_RS09405 PF00912 Transglycosylase AYR56_RS09410 PF00872 Transposase, Mutator family AYR56_RS09415 PF00356 Bacterial regulatory proteins, lacI family AYR56_RS09420 PF00557 Metallopeptidase family M24 AYR56_RS09420 PF01321 Creatinase/Prolidase N-terminal domain AYR56_RS09440 PF00924 Mechanosensitive ion channel AYR56_RS09450 PF00248 Aldo/keto reductase family AYR56_RS09460 PF01053 Cys/Met metabolism PLP-dependent enzyme AYR56_RS09465 PF04204 Homoserine O-succinyltransferase AYR56_RS09470 PF03816 Cell envelope-related transcriptional attenuator domain AYR56_RS09475 PF00877 NlpC/P60 family AYR56_RS09490 PF02664 S-Ribosylhomocysteinase (LuxS) AYR56_RS09495 PF01725 Ham1 family AYR56_RS09500 PF01227 GTP cyclohydrolase I AYR56_RS09505 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AYR56_RS09505 PF01227 GTP cyclohydrolase I AYR56_RS09515 PF00809 Pterin binding enzyme AYR56_RS09520 PF07687 Peptidase dimerisation domain AYR56_RS09520 PF01546 Peptidase family M20/M25/M40 AYR56_RS09525 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AYR56_RS09525 PF00132 Bacterial transferase hexapeptide (six repeats) AYR56_RS09525 PF14602 Hexapeptide repeat of succinyl-transferase AYR56_RS09535 PF03725 3' exoribonuclease family, domain 2 AYR56_RS09535 PF01138 3' exoribonuclease family, domain 1 AYR56_RS09540 PF01177 Asp/Glu/Hydantoin racemase AYR56_RS09545 PF10702 Protein of unknown function (DUF2507) AYR56_RS09550 PF01541 GIY-YIG catalytic domain AYR56_RS09550 PF02151 UvrB/uvrC motif AYR56_RS09550 PF08459 UvrC Helix-hairpin-helix N-terminal AYR56_RS09560 PF00085 Thioredoxin AYR56_RS09565 PF01713 Smr domain AYR56_RS09565 PF00488 MutS domain V AYR56_RS09580 PF03652 Holliday junction resolvase AYR56_RS09585 PF06135 IreB regulatory phosphoprotein AYR56_RS09590 PF02272 DHHA1 domain AYR56_RS09590 PF01411 tRNA synthetases class II (A) AYR56_RS09590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AYR56_RS09595 PF00270 DEAD/DEAH box helicase AYR56_RS09595 PF00271 Helicase conserved C-terminal domain AYR56_RS09600 PF01368 DHH family AYR56_RS09600 PF02272 DHHA1 domain AYR56_RS09605 PF07085 DRTGG domain AYR56_RS09605 PF00392 Bacterial regulatory proteins, gntR family AYR56_RS09605 PF00571 CBS domain AYR56_RS09605 PF03061 Thioesterase superfamily AYR56_RS09615 PF00817 impB/mucB/samB family AYR56_RS09615 PF11799 impB/mucB/samB family C-terminal domain AYR56_RS09620 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AYR56_RS09620 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AYR56_RS09625 PF00171 Aldehyde dehydrogenase family AYR56_RS09625 PF00465 Iron-containing alcohol dehydrogenase AYR56_RS09630 PF02699 Preprotein translocase subunit AYR56_RS09635 PF01702 Queuine tRNA-ribosyltransferase AYR56_RS09640 PF02547 Queuosine biosynthesis protein AYR56_RS09645 PF17864 RuvB AAA lid domain AYR56_RS09645 PF05491 RuvB C-terminal winged helix domain AYR56_RS09645 PF05496 Holliday junction DNA helicase RuvB P-loop domain AYR56_RS09650 PF07499 RuvA, C-terminal domain AYR56_RS09650 PF01330 RuvA N terminal domain AYR56_RS09655 PF00893 Small Multidrug Resistance protein AYR56_RS09660 PF00893 Small Multidrug Resistance protein AYR56_RS09670 PF05192 MutS domain III AYR56_RS09670 PF00488 MutS domain V AYR56_RS09670 PF05190 MutS family domain IV AYR56_RS09670 PF01624 MutS domain I AYR56_RS09670 PF05188 MutS domain II AYR56_RS09675 PF06133 Control of competence regulator ComK, YlbF/YmcA AYR56_RS09680 PF13277 YmdB-like protein AYR56_RS09685 PF13520 Amino acid permease AYR56_RS09690 PF00118 TCP-1/cpn60 chaperonin family AYR56_RS09695 PF00166 Chaperonin 10 Kd subunit AYR56_RS09700 PF02517 CPBP intramembrane metalloprotease AYR56_RS09705 PF06971 Putative DNA-binding protein N-terminus AYR56_RS09705 PF02629 CoA binding domain AYR56_RS09710 PF16326 ABC transporter C-terminal domain AYR56_RS09710 PF12848 ABC transporter AYR56_RS09710 PF00005 ABC transporter AYR56_RS09715 PF00814 Glycoprotease family AYR56_RS09730 PF00814 Glycoprotease family AYR56_RS09735 PF12822 ECF transporter, substrate-specific component AYR56_RS09745 PF17763 Glutaminase/Asparaginase C-terminal domain AYR56_RS09745 PF00710 Asparaginase, N-terminal AYR56_RS09750 PF00483 Nucleotidyl transferase AYR56_RS09800 PF04138 GtrA-like protein AYR56_RS09805 PF03050 Transposase IS66 family AYR56_RS09805 PF13007 Transposase C of IS166 homeodomain AYR56_RS09805 PF13817 IS66 C-terminal element AYR56_RS09805 PF13005 zinc-finger binding domain of transposase IS66 AYR56_RS09825 PF00877 NlpC/P60 family AYR56_RS09840 PF00877 NlpC/P60 family AYR56_RS09860 PF01527 Transposase AYR56_RS09865 PF13276 HTH-like domain AYR56_RS09865 PF00665 Integrase core domain AYR56_RS09865 PF13333 Integrase core domain AYR56_RS09875 PF00535 Glycosyl transferase family 2 AYR56_RS09880 PF00535 Glycosyl transferase family 2 AYR56_RS09885 PF13333 Integrase core domain AYR56_RS09885 PF00665 Integrase core domain AYR56_RS09885 PF13276 HTH-like domain AYR56_RS09890 PF01527 Transposase AYR56_RS09910 PF01467 Cytidylyltransferase-like AYR56_RS09915 PF01943 Polysaccharide biosynthesis protein AYR56_RS09915 PF14667 Polysaccharide biosynthesis C-terminal domain AYR56_RS09920 PF03275 UDP-galactopyranose mutase AYR56_RS09925 PF04991 LicD family AYR56_RS09930 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AYR56_RS09960 PF02397 Bacterial sugar transferase AYR56_RS09970 PF12804 MobA-like NTP transferase domain AYR56_RS09975 PF00892 EamA-like transporter family AYR56_RS10005 PF03796 DnaB-like helicase C terminal domain AYR56_RS10005 PF00772 DnaB-like helicase N terminal domain AYR56_RS10015 PF03816 Cell envelope-related transcriptional attenuator domain AYR56_RS10025 PF00849 RNA pseudouridylate synthase AYR56_RS10025 PF01479 S4 domain AYR56_RS10060 PF01717 Cobalamin-independent synthase, Catalytic domain AYR56_RS10060 PF08267 Cobalamin-independent synthase, N-terminal domain AYR56_RS10075 PF13005 zinc-finger binding domain of transposase IS66 AYR56_RS10075 PF03050 Transposase IS66 family AYR56_RS10075 PF13817 IS66 C-terminal element AYR56_RS10075 PF13007 Transposase C of IS166 homeodomain AYR56_RS10090 PF13007 Transposase C of IS166 homeodomain AYR56_RS10090 PF13817 IS66 C-terminal element AYR56_RS10090 PF13005 zinc-finger binding domain of transposase IS66 AYR56_RS10090 PF03050 Transposase IS66 family AYR56_RS10115 PF00535 Glycosyl transferase family 2 AYR56_RS10120 PF13439 Glycosyltransferase Family 4 AYR56_RS10120 PF00534 Glycosyl transferases group 1 AYR56_RS10130 PF17102 Stealth protein CR3, conserved region 3 AYR56_RS10130 PF11380 Stealth protein CR2, conserved region 2 AYR56_RS10130 PF17101 Stealth protein CR1, conserved region 1 AYR56_RS10140 PF02397 Bacterial sugar transferase AYR56_RS10145 PF01370 NAD dependent epimerase/dehydratase family AYR56_RS10150 PF01527 Transposase AYR56_RS10155 PF00665 Integrase core domain AYR56_RS10155 PF13276 HTH-like domain AYR56_RS10155 PF13333 Integrase core domain AYR56_RS10160 PF00665 Integrase core domain AYR56_RS10160 PF13333 Integrase core domain AYR56_RS10160 PF13276 HTH-like domain AYR56_RS10165 PF01527 Transposase AYR56_RS10180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AYR56_RS10185 PF06156 Initiation control protein YabA AYR56_RS10190 PF04468 PSP1 C-terminal conserved region AYR56_RS10200 PF06153 Cyclic-di-AMP receptor AYR56_RS10205 PF02223 Thymidylate kinase AYR56_RS10210 PF00271 Helicase conserved C-terminal domain AYR56_RS10210 PF00176 SNF2 family N-terminal domain AYR56_RS10210 PF04434 SWIM zinc finger AYR56_RS10220 PF13662 Toprim domain AYR56_RS10220 PF02132 RecR protein AYR56_RS10225 PF02575 YbaB/EbfC DNA-binding family AYR56_RS10230 PF12169 DNA polymerase III subunits gamma and tau domain III AYR56_RS10240 PF01527 Transposase AYR56_RS10245 PF13333 Integrase core domain AYR56_RS10245 PF00665 Integrase core domain AYR56_RS10260 PF02308 MgtC family AYR56_RS10265 PF14437 MafB19-like deaminase AYR56_RS10270 PF00248 Aldo/keto reductase family AYR56_RS10285 PF03960 ArsC family AYR56_RS10290 PF02867 Ribonucleotide reductase, barrel domain AYR56_RS10290 PF00317 Ribonucleotide reductase, all-alpha domain AYR56_RS10290 PF08343 Ribonucleotide reductase N-terminal AYR56_RS10295 PF00268 Ribonucleotide reductase, small chain AYR56_RS10305 PF03706 Lysylphosphatidylglycerol synthase TM region AYR56_RS10305 PF09924 Uncharacterised conserved protein (DUF2156) AYR56_RS10310 PF13333 Integrase core domain AYR56_RS10310 PF00665 Integrase core domain AYR56_RS10310 PF13276 HTH-like domain AYR56_RS10325 PF01527 Transposase AYR56_RS10335 PF16320 Ribosomal protein L7/L12 dimerisation domain AYR56_RS10335 PF00542 Ribosomal protein L7/L12 C-terminal domain AYR56_RS10340 PF00466 Ribosomal protein L10 AYR56_RS10345 PF00687 Ribosomal protein L1p/L10e family AYR56_RS10350 PF00298 Ribosomal protein L11, RNA binding domain AYR56_RS10350 PF03946 Ribosomal protein L11, N-terminal domain AYR56_RS10360 PF02357 Transcription termination factor nusG AYR56_RS10360 PF00467 KOW motif AYR56_RS10390 PF00348 Polyprenyl synthetase AYR56_RS10405 PF05991 YacP-like NYN domain AYR56_RS10410 PF08032 RNA 2'-O ribose methyltransferase substrate binding AYR56_RS10410 PF00588 SpoU rRNA Methylase family AYR56_RS10415 PF00636 Ribonuclease III domain AYR56_RS10420 PF01406 tRNA synthetases class I (C) catalytic domain AYR56_RS10420 PF09190 DALR domain AYR56_RS10425 PF00749 tRNA synthetases class I (E and Q), catalytic domain AYR56_RS10435 PF18073 Rubredoxin metal binding domain AYR56_RS10440 PF00692 dUTPase AYR56_RS10450 PF03051 Peptidase C1-like family AYR56_RS10455 PF02705 K+ potassium transporter AYR56_RS10460 PF00300 Histidine phosphatase superfamily (branch 1) AYR56_RS10465 PF00288 GHMP kinases N terminal domain AYR56_RS10465 PF08544 GHMP kinases C terminal AYR56_RS10480 PF03816 Cell envelope-related transcriptional attenuator domain AYR56_RS10485 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AYR56_RS10490 PF01039 Carboxyl transferase domain AYR56_RS10495 PF02785 Biotin carboxylase C-terminal domain AYR56_RS10495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYR56_RS10495 PF00289 Biotin carboxylase, N-terminal domain AYR56_RS10500 PF01597 Glycine cleavage H-protein AYR56_RS10505 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AYR56_RS10505 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AYR56_RS10515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AYR56_RS10515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AYR56_RS10515 PF00205 Thiamine pyrophosphate enzyme, central domain AYR56_RS10520 PF13520 Amino acid permease AYR56_RS10525 PF10415 Fumarase C C-terminus AYR56_RS10525 PF00206 Lyase AYR56_RS10535 PF00380 Ribosomal protein S9/S16 AYR56_RS10540 PF00572 Ribosomal protein L13 AYR56_RS10560 PF13614 AAA domain AYR56_RS10565 PF02706 Chain length determinant protein AYR56_RS10565 PF13807 G-rich domain on putative tyrosine kinase AYR56_RS10570 PF01416 tRNA pseudouridine synthase AYR56_RS10575 PF02361 Cobalt transport protein AYR56_RS10580 PF00005 ABC transporter AYR56_RS10585 PF00005 ABC transporter AYR56_RS10590 PF01196 Ribosomal protein L17 AYR56_RS10595 PF01000 RNA polymerase Rpb3/RpoA insert domain AYR56_RS10595 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AYR56_RS10595 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AYR56_RS10600 PF00411 Ribosomal protein S11 AYR56_RS10605 PF00416 Ribosomal protein S13/S18 AYR56_RS10610 PF01176 Translation initiation factor 1A / IF-1 AYR56_RS10615 PF05191 Adenylate kinase, active site lid AYR56_RS10620 PF00344 SecY translocase AYR56_RS10625 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AYR56_RS10630 PF00327 Ribosomal protein L30p/L7e AYR56_RS10635 PF00333 Ribosomal protein S5, N-terminal domain AYR56_RS10635 PF03719 Ribosomal protein S5, C-terminal domain AYR56_RS10640 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AYR56_RS10645 PF00347 Ribosomal protein L6 AYR56_RS10650 PF00410 Ribosomal protein S8 AYR56_RS10655 PF00253 Ribosomal protein S14p/S29e AYR56_RS10660 PF00281 Ribosomal protein L5 AYR56_RS10660 PF00673 ribosomal L5P family C-terminus AYR56_RS10665 PF00467 KOW motif AYR56_RS10665 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AYR56_RS10670 PF00238 Ribosomal protein L14p/L23e AYR56_RS10675 PF00366 Ribosomal protein S17 AYR56_RS10680 PF00831 Ribosomal L29 protein AYR56_RS10685 PF00252 Ribosomal protein L16p/L10e AYR56_RS10690 PF00189 Ribosomal protein S3, C-terminal domain AYR56_RS10690 PF07650 KH domain AYR56_RS10695 PF00237 Ribosomal protein L22p/L17e AYR56_RS10700 PF00203 Ribosomal protein S19 AYR56_RS10705 PF00181 Ribosomal Proteins L2, RNA binding domain AYR56_RS10705 PF03947 Ribosomal Proteins L2, C-terminal domain AYR56_RS10710 PF00276 Ribosomal protein L23 AYR56_RS10715 PF00573 Ribosomal protein L4/L1 family AYR56_RS10720 PF00297 Ribosomal protein L3 AYR56_RS10725 PF00338 Ribosomal protein S10p/S20e AYR56_RS10730 PF00857 Isochorismatase family AYR56_RS10735 PF03764 Elongation factor G, domain IV AYR56_RS10735 PF00009 Elongation factor Tu GTP binding domain AYR56_RS10735 PF03144 Elongation factor Tu domain 2 AYR56_RS10735 PF00679 Elongation factor G C-terminus AYR56_RS10735 PF14492 Elongation Factor G, domain II AYR56_RS10740 PF00177 Ribosomal protein S7p/S5e AYR56_RS10745 PF00164 Ribosomal protein S12/S23 AYR56_RS10750 PF01478 Type IV leader peptidase family AYR56_RS10750 PF06750 Bacterial Peptidase A24 N-terminal domain AYR56_RS10755 PF04998 RNA polymerase Rpb1, domain 5 AYR56_RS10755 PF05000 RNA polymerase Rpb1, domain 4 AYR56_RS10755 PF04983 RNA polymerase Rpb1, domain 3 AYR56_RS10755 PF00623 RNA polymerase Rpb1, domain 2 AYR56_RS10755 PF04997 RNA polymerase Rpb1, domain 1 AYR56_RS10760 PF00562 RNA polymerase Rpb2, domain 6 AYR56_RS10760 PF10385 RNA polymerase beta subunit external 1 domain AYR56_RS10760 PF04565 RNA polymerase Rpb2, domain 3 AYR56_RS10760 PF04561 RNA polymerase Rpb2, domain 2 AYR56_RS10760 PF04560 RNA polymerase Rpb2, domain 7 AYR56_RS10760 PF04563 RNA polymerase beta subunit AYR56_RS10765 PF01136 Peptidase family U32 AYR56_RS10765 PF16325 Peptidase family U32 C-terminal domain AYR56_RS10770 PF01136 Peptidase family U32 AYR56_RS10775 PF10431 C-terminal, D2-small domain, of ClpB protein AYR56_RS10775 PF02861 Clp amino terminal domain, pathogenicity island component AYR56_RS10775 PF17871 AAA lid domain AYR56_RS10775 PF07724 AAA domain (Cdc48 subfamily) AYR56_RS10775 PF00004 ATPase family associated with various cellular activities (AAA) AYR56_RS10780 PF17727 CtsR C-terminal dimerization domain AYR56_RS10780 PF05848 CtsR N-terminal HTH domain AYR56_RS10860 PF13545 Crp-like helix-turn-helix domain AYR56_RS10860 PF00027 Cyclic nucleotide-binding domain AYR56_RS10865 PF01712 Deoxynucleoside kinase AYR56_RS10880 PF00324 Amino acid permease AYR56_RS10885 PF03306 Alpha-acetolactate decarboxylase AYR56_RS10890 PF00205 Thiamine pyrophosphate enzyme, central domain AYR56_RS10890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AYR56_RS10890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AYR56_RS10895 PF02082 Transcriptional regulator AYR56_RS10930 PF09382 RQC domain AYR56_RS10930 PF00570 HRDC domain AYR56_RS10930 PF00271 Helicase conserved C-terminal domain AYR56_RS10930 PF00270 DEAD/DEAH box helicase AYR56_RS10930 PF16124 RecQ zinc-binding AYR56_RS10935 PF03819 MazG nucleotide pyrophosphohydrolase domain AYR56_RS10940 PF03641 Possible lysine decarboxylase AYR56_RS10945 PF00392 Bacterial regulatory proteins, gntR family AYR56_RS10945 PF07702 UTRA domain AYR56_RS10950 PF00005 ABC transporter AYR56_RS10960 PF00999 Sodium/hydrogen exchanger family AYR56_RS10970 PF13411 MerR HTH family regulatory protein AYR56_RS10980 PF09297 NADH pyrophosphatase zinc ribbon domain AYR56_RS10980 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AYR56_RS10980 PF00293 NUDIX domain AYR56_RS10985 PF01433 Peptidase family M1 domain AYR56_RS10985 PF11838 ERAP1-like C-terminal domain AYR56_RS10990 PF08240 Alcohol dehydrogenase GroES-like domain AYR56_RS10990 PF00107 Zinc-binding dehydrogenase AYR56_RS11000 PF08240 Alcohol dehydrogenase GroES-like domain AYR56_RS11000 PF00107 Zinc-binding dehydrogenase AYR56_RS11000 PF13823 Alcohol dehydrogenase GroES-associated AYR56_RS11025 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family AYR56_RS11030 PF07690 Major Facilitator Superfamily AYR56_RS11040 PF03466 LysR substrate binding domain AYR56_RS11040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYR56_RS11045 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal AYR56_RS11045 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AYR56_RS11045 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AYR56_RS11050 PF00005 ABC transporter AYR56_RS11065 PF00486 Transcriptional regulatory protein, C terminal AYR56_RS11065 PF00072 Response regulator receiver domain AYR56_RS11070 PF17922 Tetracyclin repressor-like, C-terminal domain AYR56_RS11070 PF00440 Bacterial regulatory proteins, tetR family AYR56_RS11075 PF00005 ABC transporter AYR56_RS11090 PF11188 Protein of unknown function (DUF2975) AYR56_RS11095 PF13443 Cro/C1-type HTH DNA-binding domain AYR56_RS11135 PF01209 ubiE/COQ5 methyltransferase family AYR56_RS11140 PF00958 GMP synthase C terminal domain AYR56_RS11140 PF02540 NAD synthase AYR56_RS11140 PF00117 Glutamine amidotransferase class-I AYR56_RS11145 PF00485 Phosphoribulokinase / Uridine kinase family AYR56_RS11160 PF02645 Uncharacterised protein, DegV family COG1307 AYR56_RS11165 PF13538 UvrD-like helicase C-terminal domain AYR56_RS11170 PF09335 SNARE associated Golgi protein AYR56_RS11185 PF03577 Peptidase family C69 AYR56_RS11195 PF00561 alpha/beta hydrolase fold AYR56_RS11200 PF00300 Histidine phosphatase superfamily (branch 1) AYR56_RS11205 PF03618 Kinase/pyrophosphorylase AYR56_RS11210 PF00571 CBS domain AYR56_RS11210 PF08279 HTH domain AYR56_RS11215 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AYR56_RS11215 PF02896 PEP-utilising enzyme, TIM barrel domain AYR56_RS11215 PF00391 PEP-utilising enzyme, mobile domain AYR56_RS11220 PF01596 O-methyltransferase AYR56_RS11235 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AYR56_RS11245 PF01168 Alanine racemase, N-terminal domain AYR56_RS11245 PF00842 Alanine racemase, C-terminal domain AYR56_RS11250 PF01648 4'-phosphopantetheinyl transferase superfamily AYR56_RS11255 PF00270 DEAD/DEAH box helicase AYR56_RS11255 PF00271 Helicase conserved C-terminal domain AYR56_RS11260 PF08245 Mur ligase middle domain AYR56_RS11260 PF02875 Mur ligase family, glutamate ligase domain AYR56_RS11260 PF01225 Mur ligase family, catalytic domain AYR56_RS11265 PF01820 D-ala D-ala ligase N-terminus AYR56_RS11265 PF07478 D-ala D-ala ligase C-terminus AYR56_RS11275 PF01435 Peptidase family M48 AYR56_RS11280 PF04011 LemA family AYR56_RS11285 PF00083 Sugar (and other) transporter AYR56_RS11285 PF07690 Major Facilitator Superfamily AYR56_RS11290 PF01197 Ribosomal protein L31 AYR56_RS11295 PF07498 Rho termination factor, N-terminal domain AYR56_RS11295 PF07497 Rho termination factor, RNA-binding domain AYR56_RS11295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AYR56_RS11300 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AYR56_RS11305 PF06418 CTP synthase N-terminus AYR56_RS11305 PF00117 Glutamine amidotransferase class-I AYR56_RS11310 PF05066 HB1, ASXL, restriction endonuclease HTH domain AYR56_RS11320 PF01966 HD domain AYR56_RS11330 PF04055 Radical SAM superfamily AYR56_RS11335 PF01741 Large-conductance mechanosensitive channel, MscL AYR56_RS11345 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AYR56_RS11345 PF14572 Phosphoribosyl synthetase-associated domain AYR56_RS11350 PF00132 Bacterial transferase hexapeptide (six repeats) AYR56_RS11350 PF00483 Nucleotidyl transferase AYR56_RS11360 PF07690 Major Facilitator Superfamily AYR56_RS11370 PF00156 Phosphoribosyl transferase domain AYR56_RS11370 PF09182 Bacterial purine repressor, N-terminal AYR56_RS11375 PF06257 Biofilm formation stimulator VEG AYR56_RS11380 PF00398 Ribosomal RNA adenine dimethylase AYR56_RS11385 PF13331 Domain of unknown function (DUF4093) AYR56_RS11385 PF01751 Toprim domain AYR56_RS11390 PF01026 TatD related DNase AYR56_RS11395 PF08264 Anticodon-binding domain of tRNA AYR56_RS11395 PF09334 tRNA synthetases class I (M) AYR56_RS11395 PF01588 Putative tRNA binding domain AYR56_RS11400 PF00958 GMP synthase C terminal domain AYR56_RS11400 PF03352 Methyladenine glycosylase AYR56_RS11400 PF13302 Acetyltransferase (GNAT) domain AYR56_RS11400 PF13673 Acetyltransferase (GNAT) domain AYR56_RS11400 PF00117 Glutamine amidotransferase class-I AYR56_RS11405 PF01904 Protein of unknown function DUF72 AYR56_RS11420 PF00293 NUDIX domain AYR56_RS11430 PF02146 Sir2 family AYR56_RS11460 PF07731 Multicopper oxidase AYR56_RS11460 PF07732 Multicopper oxidase AYR56_RS11470 PF00392 Bacterial regulatory proteins, gntR family AYR56_RS11470 PF00155 Aminotransferase class I and II AYR56_RS11495 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AYR56_RS11495 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AYR56_RS11500 PF00202 Aminotransferase class-III AYR56_RS11505 PF00696 Amino acid kinase family AYR56_RS11510 PF01960 ArgJ family AYR56_RS11515 PF02774 Semialdehyde dehydrogenase, dimerisation domain AYR56_RS11515 PF01118 Semialdehyde dehydrogenase, NAD binding domain AYR56_RS11520 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AYR56_RS11520 PF00117 Glutamine amidotransferase class-I AYR56_RS11525 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYR56_RS11525 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AYR56_RS11535 PF04260 Protein of unknown function (DUF436) AYR56_RS11555 PF00892 EamA-like transporter family AYR56_RS11560 PF13520 Amino acid permease AYR56_RS11565 PF00872 Transposase, Mutator family AYR56_RS11570 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase AYR56_RS11570 PF09363 XFP C-terminal domain AYR56_RS11570 PF09364 XFP N-terminal domain AYR56_RS11575 PF07702 UTRA domain AYR56_RS11575 PF00392 Bacterial regulatory proteins, gntR family AYR56_RS11580 PF00561 alpha/beta hydrolase fold AYR56_RS11600 PF04024 PspC domain AYR56_RS11605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AYR56_RS11605 PF00205 Thiamine pyrophosphate enzyme, central domain AYR56_RS11605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AYR56_RS11610 PF00106 short chain dehydrogenase AYR56_RS11620 PF13419 Haloacid dehalogenase-like hydrolase AYR56_RS11630 PF04343 Protein of unknown function, DUF488 AYR56_RS11635 PF01869 BadF/BadG/BcrA/BcrD ATPase family AYR56_RS11645 PF13350 Tyrosine phosphatase family AYR56_RS11650 PF01546 Peptidase family M20/M25/M40 AYR56_RS11650 PF07687 Peptidase dimerisation domain AYR56_RS11660 PF00571 CBS domain AYR56_RS11660 PF01595 Cyclin M transmembrane N-terminal domain AYR56_RS11660 PF03471 Transporter associated domain AYR56_RS11670 PF13396 Phospholipase_D-nuclease N-terminal AYR56_RS11670 PF13091 PLD-like domain AYR56_RS11675 PF03553 Na+/H+ antiporter family AYR56_RS11680 PF07690 Major Facilitator Superfamily AYR56_RS11700 PF07972 NrdI Flavodoxin like AYR56_RS11715 PF01431 Peptidase family M13 AYR56_RS11715 PF05649 Peptidase family M13 AYR56_RS11730 PF03051 Peptidase C1-like family AYR56_RS11765 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYR56_RS11770 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS11775 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS11780 PF00005 ABC transporter AYR56_RS11790 PF16363 GDP-mannose 4,6 dehydratase AYR56_RS11795 PF01906 Putative heavy-metal-binding AYR56_RS11805 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYR56_RS11815 PF01625 Peptide methionine sulfoxide reductase AYR56_RS11825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYR56_RS11825 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR56_RS11845 PF03610 PTS system fructose IIA component AYR56_RS11850 PF02734 DAK2 domain AYR56_RS11855 PF02733 Dak1 domain AYR56_RS11860 PF02028 BCCT, betaine/carnitine/choline family transporter AYR56_RS11865 PF00132 Bacterial transferase hexapeptide (six repeats) AYR56_RS11865 PF14602 Hexapeptide repeat of succinyl-transferase AYR56_RS11865 PF12464 Maltose acetyltransferase AYR56_RS11875 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS11880 PF00528 Binding-protein-dependent transport system inner membrane component AYR56_RS11885 PF00005 ABC transporter AYR56_RS11890 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYR56_RS11895 PF00293 NUDIX domain AYR56_RS11900 PF03553 Na+/H+ antiporter family AYR56_RS11910 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AYR56_RS11915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYR56_RS11915 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYR56_RS11930 PF13537 Glutamine amidotransferase domain AYR56_RS11930 PF00733 Asparagine synthase AYR56_RS11945 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AYR56_RS11945 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AYR56_RS11950 PF01545 Cation efflux family AYR56_RS11955 PF01368 DHH family AYR56_RS11955 PF02833 DHHA2 domain AYR56_RS11960 PF00654 Voltage gated chloride channel AYR56_RS11990 PF03965 Penicillinase repressor AYR56_RS11995 PF00313 'Cold-shock' DNA-binding domain AYR56_RS12005 PF00248 Aldo/keto reductase family AYR56_RS12015 PF01565 FAD binding domain AYR56_RS12015 PF02913 FAD linked oxidases, C-terminal domain AYR56_RS12020 PF01180 Dihydroorotate dehydrogenase AYR56_RS12030 PF00005 ABC transporter AYR56_RS12045 PF00155 Aminotransferase class I and II AYR56_RS12050 PF13460 NAD(P)H-binding AYR56_RS12060 PF01566 Natural resistance-associated macrophage protein AYR56_RS12070 PF00005 ABC transporter AYR56_RS12075 PF02687 FtsX-like permease family AYR56_RS12080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYR56_RS12080 PF00672 HAMP domain AYR56_RS12080 PF00512 His Kinase A (phospho-acceptor) domain AYR56_RS12085 PF00072 Response regulator receiver domain AYR56_RS12085 PF00486 Transcriptional regulatory protein, C terminal AYR56_RS12095 PF00403 Heavy-metal-associated domain AYR56_RS12100 PF00403 Heavy-metal-associated domain AYR56_RS12105 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AYR56_RS12110 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AYR56_RS12130 PF13439 Glycosyltransferase Family 4 AYR56_RS12130 PF00534 Glycosyl transferases group 1 AYR56_RS12135 PF00534 Glycosyl transferases group 1 AYR56_RS12135 PF13439 Glycosyltransferase Family 4 AYR56_RS12140 PF00440 Bacterial regulatory proteins, tetR family AYR56_RS12145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AYR56_RS12145 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AYR56_RS12160 PF00106 short chain dehydrogenase AYR56_RS12165 PF00085 Thioredoxin AYR56_RS12180 PF02913 FAD linked oxidases, C-terminal domain AYR56_RS12180 PF01565 FAD binding domain AYR56_RS12185 PF00005 ABC transporter AYR56_RS12185 PF12848 ABC transporter AYR56_RS12195 PF00005 ABC transporter AYR56_RS12195 PF12848 ABC transporter AYR56_RS12200 PF00871 Acetokinase family AYR56_RS12205 PF00202 Aminotransferase class-III AYR56_RS12215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYR56_RS12215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYR56_RS12220 PF01566 Natural resistance-associated macrophage protein AYR56_RS12225 PF03746 LamB/YcsF family AYR56_RS12230 PF07286 Protein of unknown function (DUF1445) AYR56_RS12235 PF02785 Biotin carboxylase C-terminal domain AYR56_RS12235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYR56_RS12235 PF00289 Biotin carboxylase, N-terminal domain AYR56_RS12240 PF00364 Biotin-requiring enzyme AYR56_RS12245 PF02626 Carboxyltransferase domain, subdomain A and B AYR56_RS12250 PF02682 Carboxyltransferase domain, subdomain C and D AYR56_RS12260 PF07690 Major Facilitator Superfamily AYR56_RS12405 PF00474 Sodium:solute symporter family AYR56_RS12705 PF03613 PTS system mannose/fructose/sorbose family IID component AYR56_RS13080 PF09364 XFP N-terminal domain AYR56_RS13080 PF09363 XFP C-terminal domain AYR56_RS13080 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase