AYR56_RS00070	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AYR56_RS00070	PWY-5723	Rubisco shunt
AYR56_RS00110	PWY-2941	L-lysine biosynthesis II
AYR56_RS00110	PWY-2942	L-lysine biosynthesis III
AYR56_RS00110	PWY-5097	L-lysine biosynthesis VI
AYR56_RS00160	PWY-1042	glycolysis IV (plant cytosol)
AYR56_RS00160	PWY-1622	formaldehyde assimilation I (serine pathway)
AYR56_RS00160	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AYR56_RS00160	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYR56_RS00160	PWY-5723	Rubisco shunt
AYR56_RS00160	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AYR56_RS00160	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYR56_RS00160	PWY-6886	1-butanol autotrophic biosynthesis
AYR56_RS00160	PWY-6901	superpathway of glucose and xylose degradation
AYR56_RS00160	PWY-7003	glycerol degradation to butanol
AYR56_RS00160	PWY-7124	ethylene biosynthesis V (engineered)
AYR56_RS00160	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AYR56_RS00165	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AYR56_RS00175	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AYR56_RS00175	PWY-5901	2,3-dihydroxybenzoate biosynthesis
AYR56_RS00175	PWY-6406	salicylate biosynthesis I
AYR56_RS00260	PWY-6823	molybdenum cofactor biosynthesis
AYR56_RS00330	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AYR56_RS00335	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
AYR56_RS00350	PWY-6823	molybdenum cofactor biosynthesis
AYR56_RS00360	PWY-6823	molybdenum cofactor biosynthesis
AYR56_RS00405	PWY-2201	folate transformations I
AYR56_RS00405	PWY-3841	folate transformations II
AYR56_RS00415	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AYR56_RS00415	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AYR56_RS00445	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AYR56_RS00535	PWY-6840	homoglutathione biosynthesis
AYR56_RS00535	PWY-7255	ergothioneine biosynthesis I (bacteria)
AYR56_RS00640	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AYR56_RS00645	PWY-6871	3-methylbutanol biosynthesis
AYR56_RS00665	PWY-5344	L-homocysteine biosynthesis
AYR56_RS00665	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AYR56_RS00755	PWY-5350	thiosulfate disproportionation III (rhodanese)
AYR56_RS00770	PWY-6823	molybdenum cofactor biosynthesis
AYR56_RS00770	PWY-6891	thiazole biosynthesis II (Bacillus)
AYR56_RS00770	PWY-6892	thiazole biosynthesis I (E. coli)
AYR56_RS00770	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AYR56_RS00790	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AYR56_RS00970	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYR56_RS00970	PWY-6416	quinate degradation II
AYR56_RS00970	PWY-6707	gallate biosynthesis
AYR56_RS00975	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYR56_RS01010	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYR56_RS01015	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYR56_RS01040	PWY-6936	seleno-amino acid biosynthesis
AYR56_RS01085	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AYR56_RS01085	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AYR56_RS01085	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AYR56_RS01085	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AYR56_RS01085	PWY-6978	plastoquinol-9 biosynthesis II
AYR56_RS01270	PWY-6854	ethylene biosynthesis III (microbes)
AYR56_RS01345	PWY-6936	seleno-amino acid biosynthesis
AYR56_RS01345	PWY-7274	D-cycloserine biosynthesis
AYR56_RS01450	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYR56_RS01450	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYR56_RS01450	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYR56_RS01575	PWY-6825	phosphatidylcholine biosynthesis V
AYR56_RS01630	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AYR56_RS01630	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AYR56_RS01630	PWY-6897	thiamin salvage II
AYR56_RS01630	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AYR56_RS01630	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AYR56_RS01630	PWY-7356	thiamin salvage IV (yeast)
AYR56_RS01630	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AYR56_RS01635	PWY-6910	hydroxymethylpyrimidine salvage
AYR56_RS01635	PWY-7356	thiamin salvage IV (yeast)
AYR56_RS01635	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AYR56_RS01640	PWY-6897	thiamin salvage II
AYR56_RS01640	PWY-7356	thiamin salvage IV (yeast)
AYR56_RS01640	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AYR56_RS01645	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYR56_RS01755	PWY-4261	glycerol degradation I
AYR56_RS01760	PWY-4261	glycerol degradation I
AYR56_RS01760	PWY-6118	glycerol-3-phosphate shuttle
AYR56_RS01760	PWY-6952	glycerophosphodiester degradation
AYR56_RS01780	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AYR56_RS01795	PWY-5482	pyruvate fermentation to acetate II
AYR56_RS01795	PWY-5485	pyruvate fermentation to acetate IV
AYR56_RS01795	PWY-5497	purine nucleobases degradation II (anaerobic)
AYR56_RS01820	PWY-5525	D-glucuronate degradation I
AYR56_RS01825	PWY-6167	flavin biosynthesis II (archaea)
AYR56_RS01825	PWY-6168	flavin biosynthesis III (fungi)
AYR56_RS01825	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYR56_RS01830	PWY-6167	flavin biosynthesis II (archaea)
AYR56_RS01830	PWY-6168	flavin biosynthesis III (fungi)
AYR56_RS01830	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AYR56_RS01835	PWY-6167	flavin biosynthesis II (archaea)
AYR56_RS01835	PWY-6168	flavin biosynthesis III (fungi)
AYR56_RS01950	PWY-2721	trehalose degradation III
AYR56_RS01950	PWY-2722	trehalose degradation IV
AYR56_RS01950	PWY-6317	galactose degradation I (Leloir pathway)
AYR56_RS01950	PWY-7459	kojibiose degradation
AYR56_RS02020	PWY-2941	L-lysine biosynthesis II
AYR56_RS02020	PWY-2942	L-lysine biosynthesis III
AYR56_RS02020	PWY-5097	L-lysine biosynthesis VI
AYR56_RS02020	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYR56_RS02020	PWY-6559	spermidine biosynthesis II
AYR56_RS02020	PWY-6562	norspermidine biosynthesis
AYR56_RS02020	PWY-7153	grixazone biosynthesis
AYR56_RS02020	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYR56_RS02040	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AYR56_RS02040	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AYR56_RS02105	PWY-6123	inosine-5'-phosphate biosynthesis I
AYR56_RS02105	PWY-7234	inosine-5'-phosphate biosynthesis III
AYR56_RS02115	PWY-6123	inosine-5'-phosphate biosynthesis I
AYR56_RS02115	PWY-6124	inosine-5'-phosphate biosynthesis II
AYR56_RS02115	PWY-7234	inosine-5'-phosphate biosynthesis III
AYR56_RS02120	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AYR56_RS02120	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AYR56_RS02120	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AYR56_RS02125	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AYR56_RS02125	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AYR56_RS02125	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AYR56_RS02130	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AYR56_RS02130	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AYR56_RS02130	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AYR56_RS02135	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AYR56_RS02135	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AYR56_RS02135	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AYR56_RS02135	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AYR56_RS02140	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AYR56_RS02140	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AYR56_RS02140	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AYR56_RS02145	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AYR56_RS02145	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AYR56_RS02150	PWY-6123	inosine-5'-phosphate biosynthesis I
AYR56_RS02150	PWY-6124	inosine-5'-phosphate biosynthesis II
AYR56_RS02150	PWY-7234	inosine-5'-phosphate biosynthesis III
AYR56_RS02155	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AYR56_RS02155	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AYR56_RS02155	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AYR56_RS02365	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AYR56_RS02365	PWY-6596	adenosine nucleotides degradation I
AYR56_RS02365	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AYR56_RS02395	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AYR56_RS02400	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYR56_RS02455	PWY-6654	phosphopantothenate biosynthesis III
AYR56_RS02620	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AYR56_RS02620	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AYR56_RS02620	PWY-6936	seleno-amino acid biosynthesis
AYR56_RS02620	PWY-702	L-methionine biosynthesis II
AYR56_RS02635	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYR56_RS02635	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYR56_RS02990	PWY-5101	L-isoleucine biosynthesis II
AYR56_RS02990	PWY-5103	L-isoleucine biosynthesis III
AYR56_RS02990	PWY-5104	L-isoleucine biosynthesis IV
AYR56_RS02990	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYR56_RS03000	PWY-5101	L-isoleucine biosynthesis II
AYR56_RS03000	PWY-5103	L-isoleucine biosynthesis III
AYR56_RS03000	PWY-5104	L-isoleucine biosynthesis IV
AYR56_RS03000	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AYR56_RS03000	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AYR56_RS03000	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AYR56_RS03000	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYR56_RS03005	PWY-5101	L-isoleucine biosynthesis II
AYR56_RS03005	PWY-5103	L-isoleucine biosynthesis III
AYR56_RS03005	PWY-5104	L-isoleucine biosynthesis IV
AYR56_RS03005	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AYR56_RS03005	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AYR56_RS03005	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AYR56_RS03005	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYR56_RS03010	PWY-5103	L-isoleucine biosynthesis III
AYR56_RS03010	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYR56_RS03030	PWY-5057	L-valine degradation II
AYR56_RS03030	PWY-5076	L-leucine degradation III
AYR56_RS03030	PWY-5078	L-isoleucine degradation II
AYR56_RS03030	PWY-5101	L-isoleucine biosynthesis II
AYR56_RS03030	PWY-5103	L-isoleucine biosynthesis III
AYR56_RS03030	PWY-5104	L-isoleucine biosynthesis IV
AYR56_RS03030	PWY-5108	L-isoleucine biosynthesis V
AYR56_RS03090	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AYR56_RS03205	PWY-5030	L-histidine degradation III
AYR56_RS03205	PWY-5497	purine nucleobases degradation II (anaerobic)
AYR56_RS03245	PWY-6174	mevalonate pathway II (archaea)
AYR56_RS03245	PWY-7391	isoprene biosynthesis II (engineered)
AYR56_RS03245	PWY-7524	mevalonate pathway III (archaea)
AYR56_RS03245	PWY-922	mevalonate pathway I
AYR56_RS03335	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYR56_RS03340	PWY-5958	acridone alkaloid biosynthesis
AYR56_RS03340	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AYR56_RS03340	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AYR56_RS03345	PWY-5958	acridone alkaloid biosynthesis
AYR56_RS03345	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AYR56_RS03345	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AYR56_RS03575	PWY-6700	queuosine biosynthesis
AYR56_RS03620	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AYR56_RS03620	PWY-6855	chitin degradation I (archaea)
AYR56_RS03620	PWY-6906	chitin derivatives degradation
AYR56_RS03640	PWY-6531	mannitol cycle
AYR56_RS03655	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AYR56_RS03655	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AYR56_RS03670	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYR56_RS03670	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYR56_RS03695	PWY-7181	pyrimidine deoxyribonucleosides degradation
AYR56_RS03715	PWY-6936	seleno-amino acid biosynthesis
AYR56_RS03725	PWY-1622	formaldehyde assimilation I (serine pathway)
AYR56_RS03725	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYR56_RS03790	PWY-4621	arsenate detoxification II (glutaredoxin)
AYR56_RS03835	PWY-5101	L-isoleucine biosynthesis II
AYR56_RS03835	PWY-5103	L-isoleucine biosynthesis III
AYR56_RS03835	PWY-5104	L-isoleucine biosynthesis IV
AYR56_RS03835	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYR56_RS04095	PWY-6317	galactose degradation I (Leloir pathway)
AYR56_RS04095	PWY-6527	stachyose degradation
AYR56_RS04260	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYR56_RS04265	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYR56_RS04270	PWY-1042	glycolysis IV (plant cytosol)
AYR56_RS04270	PWY-1622	formaldehyde assimilation I (serine pathway)
AYR56_RS04270	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AYR56_RS04270	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYR56_RS04270	PWY-5723	Rubisco shunt
AYR56_RS04270	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYR56_RS04270	PWY-6886	1-butanol autotrophic biosynthesis
AYR56_RS04270	PWY-6901	superpathway of glucose and xylose degradation
AYR56_RS04270	PWY-7003	glycerol degradation to butanol
AYR56_RS04270	PWY-7124	ethylene biosynthesis V (engineered)
AYR56_RS04270	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AYR56_RS04285	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AYR56_RS04285	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AYR56_RS04375	PWY-5481	pyruvate fermentation to lactate
AYR56_RS04375	PWY-6901	superpathway of glucose and xylose degradation
AYR56_RS04380	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AYR56_RS04415	PWY-6599	guanine and guanosine salvage II
AYR56_RS04415	PWY-6609	adenine and adenosine salvage III
AYR56_RS04415	PWY-6610	adenine and adenosine salvage IV
AYR56_RS04415	PWY-6620	guanine and guanosine salvage
AYR56_RS04485	PWY-3341	L-proline biosynthesis III
AYR56_RS04485	PWY-4981	L-proline biosynthesis II (from arginine)
AYR56_RS04485	PWY-6344	L-ornithine degradation II (Stickland reaction)
AYR56_RS04490	PWY-6906	chitin derivatives degradation
AYR56_RS04490	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AYR56_RS04490	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AYR56_RS04505	PWY-3221	dTDP-L-rhamnose biosynthesis II
AYR56_RS04505	PWY-6808	dTDP-D-forosamine biosynthesis
AYR56_RS04505	PWY-6942	dTDP-D-desosamine biosynthesis
AYR56_RS04505	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AYR56_RS04505	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AYR56_RS04505	PWY-6974	dTDP-L-olivose biosynthesis
AYR56_RS04505	PWY-6976	dTDP-L-mycarose biosynthesis
AYR56_RS04505	PWY-7104	dTDP-L-megosamine biosynthesis
AYR56_RS04505	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AYR56_RS04505	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AYR56_RS04505	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AYR56_RS04505	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AYR56_RS04505	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AYR56_RS04505	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AYR56_RS04505	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AYR56_RS04505	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AYR56_RS04505	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AYR56_RS04505	PWY-7688	AYR56_RS04505
AYR56_RS04515	PWY-3221	dTDP-L-rhamnose biosynthesis II
AYR56_RS04515	PWY-6808	dTDP-D-forosamine biosynthesis
AYR56_RS04515	PWY-6942	dTDP-D-desosamine biosynthesis
AYR56_RS04515	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AYR56_RS04515	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AYR56_RS04515	PWY-6974	dTDP-L-olivose biosynthesis
AYR56_RS04515	PWY-6976	dTDP-L-mycarose biosynthesis
AYR56_RS04515	PWY-7104	dTDP-L-megosamine biosynthesis
AYR56_RS04515	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AYR56_RS04515	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AYR56_RS04515	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AYR56_RS04515	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AYR56_RS04515	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AYR56_RS04515	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AYR56_RS04515	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AYR56_RS04515	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AYR56_RS04515	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AYR56_RS04515	PWY-7688	AYR56_RS04515
AYR56_RS04550	PWY-5381	pyridine nucleotide cycling (plants)
AYR56_RS04605	PWY-702	L-methionine biosynthesis II
AYR56_RS04725	PWY-6123	inosine-5'-phosphate biosynthesis I
AYR56_RS04725	PWY-6124	inosine-5'-phosphate biosynthesis II
AYR56_RS04725	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYR56_RS04725	PWY-7234	inosine-5'-phosphate biosynthesis III
AYR56_RS04750	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AYR56_RS04760	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AYR56_RS04760	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AYR56_RS04760	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AYR56_RS04850	PWY-3801	sucrose degradation II (sucrose synthase)
AYR56_RS04850	PWY-6527	stachyose degradation
AYR56_RS04850	PWY-7238	sucrose biosynthesis II
AYR56_RS04850	PWY-7343	UDP-glucose biosynthesis
AYR56_RS05080	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AYR56_RS05080	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AYR56_RS05080	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AYR56_RS05465	PWY-6004	glycine betaine biosynthesis V (from glycine)
AYR56_RS05505	PWY-5269	cardiolipin biosynthesis II
AYR56_RS05505	PWY-5668	cardiolipin biosynthesis I
AYR56_RS05525	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AYR56_RS05525	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AYR56_RS05525	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AYR56_RS05635	PWY-5667	CDP-diacylglycerol biosynthesis I
AYR56_RS05635	PWY-5981	CDP-diacylglycerol biosynthesis III
AYR56_RS05650	PWY-6749	CMP-legionaminate biosynthesis I
AYR56_RS05675	PWY-4983	L-citrulline-nitric oxide cycle
AYR56_RS05675	PWY-4984	urea cycle
AYR56_RS05675	PWY-5	canavanine biosynthesis
AYR56_RS05675	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYR56_RS05675	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYR56_RS05680	PWY-4983	L-citrulline-nitric oxide cycle
AYR56_RS05680	PWY-4984	urea cycle
AYR56_RS05680	PWY-5	canavanine biosynthesis
AYR56_RS05680	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYR56_RS05680	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYR56_RS05725	PWY-1042	glycolysis IV (plant cytosol)
AYR56_RS05725	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYR56_RS05725	PWY-6901	superpathway of glucose and xylose degradation
AYR56_RS05725	PWY-7003	glycerol degradation to butanol
AYR56_RS05730	PWY-1042	glycolysis IV (plant cytosol)
AYR56_RS05730	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYR56_RS05730	PWY-6886	1-butanol autotrophic biosynthesis
AYR56_RS05730	PWY-6901	superpathway of glucose and xylose degradation
AYR56_RS05730	PWY-7003	glycerol degradation to butanol
AYR56_RS05735	PWY-1042	glycolysis IV (plant cytosol)
AYR56_RS05735	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYR56_RS05735	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYR56_RS05735	PWY-7003	glycerol degradation to butanol
AYR56_RS05785	PWY-1281	sulfoacetaldehyde degradation I
AYR56_RS05785	PWY-5482	pyruvate fermentation to acetate II
AYR56_RS05785	PWY-5485	pyruvate fermentation to acetate IV
AYR56_RS05785	PWY-5497	purine nucleobases degradation II (anaerobic)
AYR56_RS05785	PWY-6637	sulfolactate degradation II
AYR56_RS05810	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYR56_RS05810	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYR56_RS05855	PWY-6749	CMP-legionaminate biosynthesis I
AYR56_RS05860	PWY-6749	CMP-legionaminate biosynthesis I
AYR56_RS05910	PWY-5482	pyruvate fermentation to acetate II
AYR56_RS05910	PWY-5485	pyruvate fermentation to acetate IV
AYR56_RS05910	PWY-5497	purine nucleobases degradation II (anaerobic)
AYR56_RS06055	PWY-3801	sucrose degradation II (sucrose synthase)
AYR56_RS06055	PWY-5054	sorbitol biosynthesis I
AYR56_RS06055	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AYR56_RS06055	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AYR56_RS06055	PWY-5659	GDP-mannose biosynthesis
AYR56_RS06055	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYR56_RS06055	PWY-621	sucrose degradation III (sucrose invertase)
AYR56_RS06055	PWY-622	starch biosynthesis
AYR56_RS06055	PWY-6981	chitin biosynthesis
AYR56_RS06055	PWY-6992	1,5-anhydrofructose degradation
AYR56_RS06055	PWY-7238	sucrose biosynthesis II
AYR56_RS06055	PWY-7347	sucrose biosynthesis III
AYR56_RS06055	PWY-7385	1,3-propanediol biosynthesis (engineered)
AYR56_RS06065	PWY-1042	glycolysis IV (plant cytosol)
AYR56_RS06065	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AYR56_RS06065	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYR56_RS06065	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYR56_RS06065	PWY-7385	1,3-propanediol biosynthesis (engineered)
AYR56_RS06125	PWY-3861	mannitol degradation II
AYR56_RS06125	PWY-3881	mannitol biosynthesis
AYR56_RS06125	PWY-5659	GDP-mannose biosynthesis
AYR56_RS06125	PWY-6992	1,5-anhydrofructose degradation
AYR56_RS06125	PWY-7456	mannan degradation
AYR56_RS06125	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
AYR56_RS06125	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AYR56_RS06135	PWY-7199	pyrimidine deoxyribonucleosides salvage
AYR56_RS06155	PWY-1622	formaldehyde assimilation I (serine pathway)
AYR56_RS06155	PWY-181	photorespiration
AYR56_RS06155	PWY-2161	folate polyglutamylation
AYR56_RS06155	PWY-2201	folate transformations I
AYR56_RS06155	PWY-3661	glycine betaine degradation I
AYR56_RS06155	PWY-3661-1	glycine betaine degradation II (mammalian)
AYR56_RS06155	PWY-3841	folate transformations II
AYR56_RS06155	PWY-5497	purine nucleobases degradation II (anaerobic)
AYR56_RS06160	PWY-7183	pyrimidine nucleobases salvage I
AYR56_RS06190	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYR56_RS06200	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYR56_RS06230	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYR56_RS06230	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYR56_RS06285	PWY-6823	molybdenum cofactor biosynthesis
AYR56_RS06285	PWY-6891	thiazole biosynthesis II (Bacillus)
AYR56_RS06285	PWY-6892	thiazole biosynthesis I (E. coli)
AYR56_RS06285	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AYR56_RS06305	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AYR56_RS06305	PWY-5723	Rubisco shunt
AYR56_RS06305	PWY-6891	thiazole biosynthesis II (Bacillus)
AYR56_RS06305	PWY-6892	thiazole biosynthesis I (E. coli)
AYR56_RS06305	PWY-6901	superpathway of glucose and xylose degradation
AYR56_RS06305	PWY-7560	methylerythritol phosphate pathway II
AYR56_RS06310	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AYR56_RS06315	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AYR56_RS06315	PWY-6164	3-dehydroquinate biosynthesis I
AYR56_RS06315	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AYR56_RS06325	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AYR56_RS06335	PWY-3341	L-proline biosynthesis III
AYR56_RS06335	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AYR56_RS06340	PWY-3341	L-proline biosynthesis III
AYR56_RS06340	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AYR56_RS06400	PWY-6840	homoglutathione biosynthesis
AYR56_RS06400	PWY-7255	ergothioneine biosynthesis I (bacteria)
AYR56_RS06430	PWY-6823	molybdenum cofactor biosynthesis
AYR56_RS06430	PWY-6891	thiazole biosynthesis II (Bacillus)
AYR56_RS06430	PWY-6892	thiazole biosynthesis I (E. coli)
AYR56_RS06430	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AYR56_RS06445	PWY-2161	folate polyglutamylation
AYR56_RS06530	PWY-2201	folate transformations I
AYR56_RS06545	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AYR56_RS06545	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AYR56_RS06545	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AYR56_RS06550	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYR56_RS06550	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYR56_RS06555	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AYR56_RS06555	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AYR56_RS06555	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AYR56_RS06555	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AYR56_RS06575	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AYR56_RS06605	PWY-2941	L-lysine biosynthesis II
AYR56_RS06605	PWY-5097	L-lysine biosynthesis VI
AYR56_RS06635	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AYR56_RS06635	PWY-6153	autoinducer AI-2 biosynthesis I
AYR56_RS06635	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AYR56_RS06640	PWY-6823	molybdenum cofactor biosynthesis
AYR56_RS06640	PWY-6891	thiazole biosynthesis II (Bacillus)
AYR56_RS06640	PWY-6892	thiazole biosynthesis I (E. coli)
AYR56_RS06640	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AYR56_RS06725	PWY-5750	itaconate biosynthesis
AYR56_RS06725	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYR56_RS06725	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AYR56_RS06740	PWY-6825	phosphatidylcholine biosynthesis V
AYR56_RS06765	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AYR56_RS06795	PWY-2941	L-lysine biosynthesis II
AYR56_RS06795	PWY-2942	L-lysine biosynthesis III
AYR56_RS06795	PWY-5097	L-lysine biosynthesis VI
AYR56_RS06870	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AYR56_RS06870	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AYR56_RS06910	PWY-6605	adenine and adenosine salvage II
AYR56_RS06910	PWY-6610	adenine and adenosine salvage IV
AYR56_RS07015	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AYR56_RS07015	PWY-2201	folate transformations I
AYR56_RS07015	PWY-3841	folate transformations II
AYR56_RS07015	PWY-5030	L-histidine degradation III
AYR56_RS07015	PWY-5497	purine nucleobases degradation II (anaerobic)
AYR56_RS07015	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AYR56_RS07060	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AYR56_RS07085	PWY-6825	phosphatidylcholine biosynthesis V
AYR56_RS07105	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AYR56_RS07105	PWY-5723	Rubisco shunt
AYR56_RS07110	PWY-6898	thiamin salvage III
AYR56_RS07110	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AYR56_RS07110	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AYR56_RS07110	PWY-7356	thiamin salvage IV (yeast)
AYR56_RS07260	PWY-6829	tRNA methylation (yeast)
AYR56_RS07260	PWY-7285	methylwyosine biosynthesis
AYR56_RS07260	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AYR56_RS07330	PWY-2941	L-lysine biosynthesis II
AYR56_RS07330	PWY-2942	L-lysine biosynthesis III
AYR56_RS07330	PWY-5097	L-lysine biosynthesis VI
AYR56_RS07505	PWY-2941	L-lysine biosynthesis II
AYR56_RS07505	PWY-2942	L-lysine biosynthesis III
AYR56_RS07505	PWY-5097	L-lysine biosynthesis VI
AYR56_RS07520	PWY-3841	folate transformations II
AYR56_RS07520	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYR56_RS07520	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYR56_RS07520	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AYR56_RS07520	PWY-7199	pyrimidine deoxyribonucleosides salvage
AYR56_RS07520	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AYR56_RS07525	PWY-3841	folate transformations II
AYR56_RS07525	PWY-6614	tetrahydrofolate biosynthesis
AYR56_RS07560	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYR56_RS07640	PWY-5480	pyruvate fermentation to ethanol I
AYR56_RS07640	PWY-5485	pyruvate fermentation to acetate IV
AYR56_RS07640	PWY-5493	reductive monocarboxylic acid cycle
AYR56_RS07675	PWY-5481	pyruvate fermentation to lactate
AYR56_RS07675	PWY-6901	superpathway of glucose and xylose degradation
AYR56_RS07700	PWY-5686	UMP biosynthesis
AYR56_RS07705	PWY-5686	UMP biosynthesis
AYR56_RS07710	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYR56_RS07710	PWY-5686	UMP biosynthesis
AYR56_RS07710	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYR56_RS07715	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYR56_RS07715	PWY-5686	UMP biosynthesis
AYR56_RS07715	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYR56_RS07720	PWY-5686	UMP biosynthesis
AYR56_RS07725	PWY-5686	UMP biosynthesis
AYR56_RS07735	PWY-7183	pyrimidine nucleobases salvage I
AYR56_RS07755	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AYR56_RS07755	PWY-2161	folate polyglutamylation
AYR56_RS07755	PWY-2201	folate transformations I
AYR56_RS07755	PWY-3841	folate transformations II
AYR56_RS07805	PWY-6825	phosphatidylcholine biosynthesis V
AYR56_RS07865	PWY-3821	galactose degradation III
AYR56_RS07865	PWY-6174	mevalonate pathway II (archaea)
AYR56_RS07865	PWY-6317	galactose degradation I (Leloir pathway)
AYR56_RS07865	PWY-6527	stachyose degradation
AYR56_RS07865	PWY-7391	isoprene biosynthesis II (engineered)
AYR56_RS07865	PWY-922	mevalonate pathway I
AYR56_RS07870	PWY-7391	isoprene biosynthesis II (engineered)
AYR56_RS07870	PWY-922	mevalonate pathway I
AYR56_RS07875	PWY-3821	galactose degradation III
AYR56_RS07875	PWY-6317	galactose degradation I (Leloir pathway)
AYR56_RS07875	PWY-6527	stachyose degradation
AYR56_RS07875	PWY-7391	isoprene biosynthesis II (engineered)
AYR56_RS07875	PWY-922	mevalonate pathway I
AYR56_RS07880	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
AYR56_RS07880	PWY-6174	mevalonate pathway II (archaea)
AYR56_RS07880	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
AYR56_RS07880	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
AYR56_RS07880	PWY-7102	bisabolene biosynthesis
AYR56_RS07880	PWY-7391	isoprene biosynthesis II (engineered)
AYR56_RS07880	PWY-7524	mevalonate pathway III (archaea)
AYR56_RS07880	PWY-7560	methylerythritol phosphate pathway II
AYR56_RS07880	PWY-922	mevalonate pathway I
AYR56_RS07885	PWY-6825	phosphatidylcholine biosynthesis V
AYR56_RS07905	PWY-4261	glycerol degradation I
AYR56_RS08100	PWY-7205	CMP phosphorylation
AYR56_RS08165	PWY-1042	glycolysis IV (plant cytosol)
AYR56_RS08165	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AYR56_RS08165	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYR56_RS08165	PWY-5723	Rubisco shunt
AYR56_RS08165	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AYR56_RS08165	PWY-6886	1-butanol autotrophic biosynthesis
AYR56_RS08165	PWY-6901	superpathway of glucose and xylose degradation
AYR56_RS08165	PWY-7003	glycerol degradation to butanol
AYR56_RS08165	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AYR56_RS08165	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AYR56_RS08170	PWY-1042	glycolysis IV (plant cytosol)
AYR56_RS08170	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AYR56_RS08170	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYR56_RS08170	PWY-7385	1,3-propanediol biosynthesis (engineered)
AYR56_RS08235	PWY-7039	phosphatidate metabolism, as a signaling molecule
AYR56_RS08375	PWY-2201	folate transformations I
AYR56_RS08400	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AYR56_RS08400	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AYR56_RS08490	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AYR56_RS08490	PWY-6167	flavin biosynthesis II (archaea)
AYR56_RS08490	PWY-6168	flavin biosynthesis III (fungi)
AYR56_RS08640	PWY-6174	mevalonate pathway II (archaea)
AYR56_RS08640	PWY-7391	isoprene biosynthesis II (engineered)
AYR56_RS08640	PWY-7524	mevalonate pathway III (archaea)
AYR56_RS08640	PWY-7571	ferrichrome A biosynthesis
AYR56_RS08640	PWY-922	mevalonate pathway I
AYR56_RS08650	PWY-381	nitrate reduction II (assimilatory)
AYR56_RS08650	PWY-5675	nitrate reduction V (assimilatory)
AYR56_RS08650	PWY-6549	L-glutamine biosynthesis III
AYR56_RS08650	PWY-6963	ammonia assimilation cycle I
AYR56_RS08650	PWY-6964	ammonia assimilation cycle II
AYR56_RS08665	PWY-2781	<i>cis</i>-zeatin biosynthesis
AYR56_RS08680	PWY-2722	trehalose degradation IV
AYR56_RS08680	PWY-2723	trehalose degradation V
AYR56_RS08680	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AYR56_RS08680	PWY-5661	GDP-glucose biosynthesis
AYR56_RS08680	PWY-621	sucrose degradation III (sucrose invertase)
AYR56_RS08680	PWY-7238	sucrose biosynthesis II
AYR56_RS08680	PWY-7385	1,3-propanediol biosynthesis (engineered)
AYR56_RS08765	PWY-7193	pyrimidine ribonucleosides salvage I
AYR56_RS08855	PWY-5381	pyridine nucleotide cycling (plants)
AYR56_RS08855	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AYR56_RS08935	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYR56_RS08935	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYR56_RS09095	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AYR56_RS09095	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AYR56_RS09240	PWY-101	photosynthesis light reactions
AYR56_RS09240	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AYR56_RS09320	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AYR56_RS09320	PWY-5723	Rubisco shunt
AYR56_RS09460	PWY-5344	L-homocysteine biosynthesis
AYR56_RS09460	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AYR56_RS09490	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AYR56_RS09490	PWY-6153	autoinducer AI-2 biosynthesis I
AYR56_RS09490	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AYR56_RS09495	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AYR56_RS09500	PWY-5663	tetrahydrobiopterin biosynthesis I
AYR56_RS09500	PWY-5664	tetrahydrobiopterin biosynthesis II
AYR56_RS09500	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AYR56_RS09500	PWY-6703	preQ<sub>0</sub> biosynthesis
AYR56_RS09500	PWY-6983	tetrahydrobiopterin biosynthesis III
AYR56_RS09500	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AYR56_RS09505	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AYR56_RS09505	PWY-6148	tetrahydromethanopterin biosynthesis
AYR56_RS09505	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AYR56_RS09505	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AYR56_RS09510	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AYR56_RS09510	PWY-6148	tetrahydromethanopterin biosynthesis
AYR56_RS09510	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AYR56_RS09510	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AYR56_RS09515	PWY-6614	tetrahydrofolate biosynthesis
AYR56_RS09520	PWY-2941	L-lysine biosynthesis II
AYR56_RS09525	PWY-2941	L-lysine biosynthesis II
AYR56_RS09535	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AYR56_RS09540	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYR56_RS09540	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYR56_RS09605	PWY-1281	sulfoacetaldehyde degradation I
AYR56_RS09605	PWY-5482	pyruvate fermentation to acetate II
AYR56_RS09605	PWY-5485	pyruvate fermentation to acetate IV
AYR56_RS09605	PWY-5497	purine nucleobases degradation II (anaerobic)
AYR56_RS09605	PWY-6637	sulfolactate degradation II
AYR56_RS09620	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AYR56_RS09625	PWY-3162	L-tryptophan degradation V (side chain pathway)
AYR56_RS09625	PWY-5057	L-valine degradation II
AYR56_RS09625	PWY-5076	L-leucine degradation III
AYR56_RS09625	PWY-5078	L-isoleucine degradation II
AYR56_RS09625	PWY-5079	L-phenylalanine degradation III
AYR56_RS09625	PWY-5082	L-methionine degradation III
AYR56_RS09625	PWY-5162	2-oxopentenoate degradation
AYR56_RS09625	PWY-5436	L-threonine degradation IV
AYR56_RS09625	PWY-5480	pyruvate fermentation to ethanol I
AYR56_RS09625	PWY-5486	pyruvate fermentation to ethanol II
AYR56_RS09625	PWY-5751	phenylethanol biosynthesis
AYR56_RS09625	PWY-6313	serotonin degradation
AYR56_RS09625	PWY-6333	acetaldehyde biosynthesis I
AYR56_RS09625	PWY-6342	noradrenaline and adrenaline degradation
AYR56_RS09625	PWY-6587	pyruvate fermentation to ethanol III
AYR56_RS09625	PWY-6802	salidroside biosynthesis
AYR56_RS09625	PWY-6871	3-methylbutanol biosynthesis
AYR56_RS09625	PWY-7013	L-1,2-propanediol degradation
AYR56_RS09625	PWY-7085	triethylamine degradation
AYR56_RS09625	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYR56_RS09625	PWY-7118	chitin degradation to ethanol
AYR56_RS09625	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AYR56_RS09625	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AYR56_RS09635	PWY-6700	queuosine biosynthesis
AYR56_RS09640	PWY-6700	queuosine biosynthesis
AYR56_RS09715	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AYR56_RS09715	PWY-5368	dimorphecolate biosynthesis
AYR56_RS09715	PWY-5995	linoleate biosynthesis I (plants)
AYR56_RS09715	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AYR56_RS09715	PWY-6803	phosphatidylcholine acyl editing
AYR56_RS09715	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AYR56_RS09715	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AYR56_RS09715	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AYR56_RS09715	PWY-7470	phosphatidylcholine biosynthesis VII
AYR56_RS09715	PWY-7618	ricinoleate biosynthesis
AYR56_RS09730	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AYR56_RS09730	PWY-5368	dimorphecolate biosynthesis
AYR56_RS09730	PWY-5995	linoleate biosynthesis I (plants)
AYR56_RS09730	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AYR56_RS09730	PWY-6803	phosphatidylcholine acyl editing
AYR56_RS09730	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AYR56_RS09730	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AYR56_RS09730	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AYR56_RS09730	PWY-7470	phosphatidylcholine biosynthesis VII
AYR56_RS09730	PWY-7618	ricinoleate biosynthesis
AYR56_RS09750	PWY-3801	sucrose degradation II (sucrose synthase)
AYR56_RS09750	PWY-6527	stachyose degradation
AYR56_RS09750	PWY-7238	sucrose biosynthesis II
AYR56_RS09750	PWY-7343	UDP-glucose biosynthesis
AYR56_RS09920	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AYR56_RS09920	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AYR56_RS09920	PWY-7622	UDP-galactofuranose biosynthesis
AYR56_RS10060	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AYR56_RS10060	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AYR56_RS10060	PWY-6936	seleno-amino acid biosynthesis
AYR56_RS10060	PWY-702	L-methionine biosynthesis II
AYR56_RS10180	PWY-2201	folate transformations I
AYR56_RS10205	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AYR56_RS10205	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYR56_RS10205	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYR56_RS10205	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AYR56_RS10205	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AYR56_RS10205	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AYR56_RS10290	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AYR56_RS10290	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYR56_RS10290	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AYR56_RS10290	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AYR56_RS10290	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYR56_RS10290	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYR56_RS10290	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYR56_RS10290	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AYR56_RS10295	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AYR56_RS10295	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYR56_RS10295	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AYR56_RS10295	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AYR56_RS10295	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYR56_RS10295	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AYR56_RS10295	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AYR56_RS10295	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AYR56_RS10425	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AYR56_RS10460	PWY-1622	formaldehyde assimilation I (serine pathway)
AYR56_RS10460	PWY-5484	glycolysis II (from fructose 6-phosphate)
AYR56_RS10465	PWY-702	L-methionine biosynthesis II
AYR56_RS10485	PWY-4381	fatty acid biosynthesis initiation I
AYR56_RS10485	PWY-5743	3-hydroxypropanoate cycle
AYR56_RS10485	PWY-5744	glyoxylate assimilation
AYR56_RS10485	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AYR56_RS10485	PWY-6679	jadomycin biosynthesis
AYR56_RS10485	PWY-6722	candicidin biosynthesis
AYR56_RS10485	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYR56_RS10490	PWY-4381	fatty acid biosynthesis initiation I
AYR56_RS10490	PWY-5743	3-hydroxypropanoate cycle
AYR56_RS10490	PWY-5744	glyoxylate assimilation
AYR56_RS10490	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AYR56_RS10490	PWY-6679	jadomycin biosynthesis
AYR56_RS10490	PWY-6722	candicidin biosynthesis
AYR56_RS10490	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AYR56_RS10505	PWY-4381	fatty acid biosynthesis initiation I
AYR56_RS10525	PWY-5392	reductive TCA cycle II
AYR56_RS10525	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AYR56_RS10525	PWY-5690	TCA cycle II (plants and fungi)
AYR56_RS10525	PWY-5913	TCA cycle VI (obligate autotrophs)
AYR56_RS10525	PWY-6728	methylaspartate cycle
AYR56_RS10525	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AYR56_RS10525	PWY-7254	TCA cycle VII (acetate-producers)
AYR56_RS10525	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AYR56_RS10615	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYR56_RS10885	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AYR56_RS10890	PWY-5101	L-isoleucine biosynthesis II
AYR56_RS10890	PWY-5103	L-isoleucine biosynthesis III
AYR56_RS10890	PWY-5104	L-isoleucine biosynthesis IV
AYR56_RS10890	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AYR56_RS10890	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AYR56_RS10890	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AYR56_RS10890	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AYR56_RS11140	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AYR56_RS11145	PWY-3961	phosphopantothenate biosynthesis II
AYR56_RS11215	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AYR56_RS11215	PWY-6549	L-glutamine biosynthesis III
AYR56_RS11215	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AYR56_RS11215	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AYR56_RS11245	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AYR56_RS11250	PWY-6012	acyl carrier protein metabolism I
AYR56_RS11250	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AYR56_RS11260	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYR56_RS11260	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYR56_RS11265	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYR56_RS11265	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYR56_RS11295	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AYR56_RS11300	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AYR56_RS11300	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AYR56_RS11305	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AYR56_RS11305	PWY-7177	UTP and CTP dephosphorylation II
AYR56_RS11305	PWY-7185	UTP and CTP dephosphorylation I
AYR56_RS11330	PWY-2201	folate transformations I
AYR56_RS11350	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AYR56_RS11350	PWY-5667	CDP-diacylglycerol biosynthesis I
AYR56_RS11350	PWY-6453	stigma estolide biosynthesis
AYR56_RS11350	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AYR56_RS11350	PWY-7587	oleate biosynthesis III (cyanobacteria)
AYR56_RS11425	PWY-3461	L-tyrosine biosynthesis II
AYR56_RS11425	PWY-3462	L-phenylalanine biosynthesis II
AYR56_RS11425	PWY-6120	L-tyrosine biosynthesis III
AYR56_RS11425	PWY-6627	salinosporamide A biosynthesis
AYR56_RS11425	PWY-7626	bacilysin biosynthesis
AYR56_RS11495	PWY-4981	L-proline biosynthesis II (from arginine)
AYR56_RS11495	PWY-4984	urea cycle
AYR56_RS11495	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYR56_RS11505	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYR56_RS11505	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYR56_RS11510	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYR56_RS11515	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYR56_RS11515	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYR56_RS11520	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYR56_RS11520	PWY-5686	UMP biosynthesis
AYR56_RS11520	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYR56_RS11525	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AYR56_RS11525	PWY-5686	UMP biosynthesis
AYR56_RS11525	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AYR56_RS11785	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AYR56_RS11785	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AYR56_RS11790	PWY-3821	galactose degradation III
AYR56_RS11790	PWY-6317	galactose degradation I (Leloir pathway)
AYR56_RS11790	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AYR56_RS11790	PWY-6527	stachyose degradation
AYR56_RS11790	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AYR56_RS11790	PWY-7344	UDP-D-galactose biosynthesis
AYR56_RS12200	PWY-5482	pyruvate fermentation to acetate II
AYR56_RS12200	PWY-5485	pyruvate fermentation to acetate IV
AYR56_RS12200	PWY-5497	purine nucleobases degradation II (anaerobic)
AYR56_RS12210	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AYR56_RS12210	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
