AYR56_RS00020 SM00347 helix_turn_helix multiple antibiotic resistance protein AYR56_RS00100 SM00420 helix_turn_helix, Deoxyribose operon repressor AYR56_RS00100 SM01134 AYR56_RS00100 AYR56_RS00110 SM01130 AYR56_RS00110 AYR56_RS00155 SM00966 SpoVT / AbrB like domain AYR56_RS00160 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AYR56_RS00185 SM00382 ATPases associated with a variety of cellular activities AYR56_RS00195 SM00062 Bacterial periplasmic substrate-binding proteins AYR56_RS00245 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AYR56_RS00255 SM00852 Probable molybdopterin binding domain AYR56_RS00260 SM00852 Probable molybdopterin binding domain AYR56_RS00295 SM00387 Histidine kinase-like ATPases AYR56_RS00300 SM00421 helix_turn_helix, Lux Regulon AYR56_RS00300 SM00448 cheY-homologous receiver domain AYR56_RS00350 SM00729 Elongator protein 3, MiaB family, Radical SAM AYR56_RS00370 SM00382 ATPases associated with a variety of cellular activities AYR56_RS00420 SM00478 endonuclease III AYR56_RS00445 SM01133 AYR56_RS00445 AYR56_RS00465 SM00470 ParB-like nuclease domain AYR56_RS00475 SM00470 ParB-like nuclease domain AYR56_RS00495 SM00829 Enoylreductase AYR56_RS00505 SM00382 ATPases associated with a variety of cellular activities AYR56_RS00525 SM01329 AYR56_RS00525 AYR56_RS00545 SM01057 Eukaryotic-type carbonic anhydrase AYR56_RS00590 SM00382 ATPases associated with a variety of cellular activities AYR56_RS00615 SM00244 prohibitin homologues AYR56_RS00640 SM01329 AYR56_RS00640 AYR56_RS00680 SM00382 ATPases associated with a variety of cellular activities AYR56_RS00720 SM00047 Lysozyme subfamily 2 AYR56_RS00720 SM00257 Lysin motif AYR56_RS00745 SM00450 Rhodanese Homology Domain AYR56_RS00750 SM00946 Prolyl-tRNA synthetase, C-terminal AYR56_RS00755 SM00450 Rhodanese Homology Domain AYR56_RS00815 SM00382 ATPases associated with a variety of cellular activities AYR56_RS00910 SM00450 Rhodanese Homology Domain AYR56_RS01060 SM00900 AYR56_RS01060 AYR56_RS01100 SM00347 helix_turn_helix multiple antibiotic resistance protein AYR56_RS01125 SM00382 ATPases associated with a variety of cellular activities AYR56_RS01185 SM00855 Phosphoglycerate mutase family AYR56_RS01210 SM00478 endonuclease III AYR56_RS01280 SM00382 ATPases associated with a variety of cellular activities AYR56_RS01300 SM00900 AYR56_RS01300 AYR56_RS01310 SM00342 helix_turn_helix, arabinose operon control protein AYR56_RS01380 SM01001 AIR carboxylase AYR56_RS01390 SM00419 helix_turn_helix, cAMP Regulatory protein AYR56_RS01405 SM00382 ATPases associated with a variety of cellular activities AYR56_RS01430 SM00062 Bacterial periplasmic substrate-binding proteins AYR56_RS01440 SM00347 helix_turn_helix multiple antibiotic resistance protein AYR56_RS01475 SM00422 helix_turn_helix, mercury resistance AYR56_RS01480 SM00986 Uracil DNA glycosylase superfamily AYR56_RS01480 SM00987 UreE urease accessory protein, C-terminal domain AYR56_RS01520 SM00838 Elongation factor G C-terminus AYR56_RS01520 SM00889 Elongation factor G, domain IV AYR56_RS01555 SM00382 ATPases associated with a variety of cellular activities AYR56_RS01580 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AYR56_RS01585 SM00849 Metallo-beta-lactamase superfamily AYR56_RS01600 SM00091 PAS domain AYR56_RS01600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AYR56_RS01600 SM00387 Histidine kinase-like ATPases AYR56_RS01600 SM00388 His Kinase A (phosphoacceptor) domain AYR56_RS01605 SM00448 cheY-homologous receiver domain AYR56_RS01605 SM00862 Transcriptional regulatory protein, C terminal AYR56_RS01645 SM00788 Adenylosuccinate synthetase AYR56_RS01665 SM00267 diguanylate cyclase AYR56_RS01685 SM00434 DNA Topoisomerase IV AYR56_RS01690 SM00387 Histidine kinase-like ATPases AYR56_RS01690 SM00433 TopoisomeraseII AYR56_RS01705 SM00480 DNA polymerase III beta subunit AYR56_RS01710 SM00382 ATPases associated with a variety of cellular activities AYR56_RS01710 SM00760 Bacterial dnaA protein helix-turn-helix domain AYR56_RS01725 SM00393 Putative single-stranded nucleic acids-binding domain AYR56_RS01725 SM01245 AYR56_RS01725 AYR56_RS01735 SM01228 AYR56_RS01735 AYR56_RS01740 SM00422 helix_turn_helix, mercury resistance AYR56_RS01770 SM00488 AYR56_RS01770 AYR56_RS01770 SM00491 AYR56_RS01770 AYR56_RS01855 SM01400 AYR56_RS01855 AYR56_RS01890 SM00014 Acid phosphatase homologues AYR56_RS01905 SM00387 Histidine kinase-like ATPases AYR56_RS01905 SM00388 His Kinase A (phosphoacceptor) domain AYR56_RS01910 SM00448 cheY-homologous receiver domain AYR56_RS01910 SM00862 Transcriptional regulatory protein, C terminal AYR56_RS01975 SM00347 helix_turn_helix multiple antibiotic resistance protein AYR56_RS02020 SM00859 Semialdehyde dehydrogenase, NAD binding domain AYR56_RS02060 SM00855 Phosphoglycerate mutase family AYR56_RS02085 SM00116 Domain in cystathionine beta-synthase and other proteins. AYR56_RS02085 SM00382 ATPases associated with a variety of cellular activities AYR56_RS02105 SM01001 AIR carboxylase AYR56_RS02125 SM01211 AYR56_RS02125 AYR56_RS02150 SM00798 AICARFT/IMPCHase bienzyme AYR56_RS02150 SM00851 MGS-like domain AYR56_RS02155 SM01209 AYR56_RS02155 AYR56_RS02155 SM01210 AYR56_RS02155 AYR56_RS02210 SM00382 ATPases associated with a variety of cellular activities AYR56_RS02215 SM00116 Domain in cystathionine beta-synthase and other proteins. AYR56_RS02315 SM00382 ATPases associated with a variety of cellular activities AYR56_RS02320 SM00530 Helix-turn-helix XRE-family like proteins AYR56_RS02365 SM00116 Domain in cystathionine beta-synthase and other proteins. AYR56_RS02365 SM01240 AYR56_RS02365 AYR56_RS02390 SM00831 Cation transporter/ATPase, N-terminus AYR56_RS02435 SM00382 ATPases associated with a variety of cellular activities AYR56_RS02515 SM00347 helix_turn_helix multiple antibiotic resistance protein AYR56_RS02540 SM00899 AYR56_RS02540 AYR56_RS02550 SM01061 CAT RNA binding domain AYR56_RS02605 SM00506 Appr-1"-p processing enzyme AYR56_RS02635 SM01209 AYR56_RS02635 AYR56_RS02755 SM00829 Enoylreductase AYR56_RS02780 SM00831 Cation transporter/ATPase, N-terminus AYR56_RS02795 SM00382 ATPases associated with a variety of cellular activities AYR56_RS02845 SM00831 Cation transporter/ATPase, N-terminus AYR56_RS03020 SM00382 ATPases associated with a variety of cellular activities AYR56_RS03060 SM00014 Acid phosphatase homologues AYR56_RS03070 SM00257 Lysin motif AYR56_RS03075 SM00382 ATPases associated with a variety of cellular activities AYR56_RS03190 SM00382 ATPases associated with a variety of cellular activities AYR56_RS03230 SM00382 ATPases associated with a variety of cellular activities AYR56_RS03240 SM00062 Bacterial periplasmic substrate-binding proteins AYR56_RS03410 SM00855 Phosphoglycerate mutase family AYR56_RS03425 SM00448 cheY-homologous receiver domain AYR56_RS03425 SM00862 Transcriptional regulatory protein, C terminal AYR56_RS03430 SM00387 Histidine kinase-like ATPases AYR56_RS03430 SM00388 His Kinase A (phosphoacceptor) domain AYR56_RS03495 SM00513 Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation AYR56_RS03580 SM00342 helix_turn_helix, arabinose operon control protein AYR56_RS03615 SM00062 Bacterial periplasmic substrate-binding proteins AYR56_RS03615 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AYR56_RS03645 SM00448 cheY-homologous receiver domain AYR56_RS03645 SM00862 Transcriptional regulatory protein, C terminal AYR56_RS03650 SM00387 Histidine kinase-like ATPases AYR56_RS03650 SM00388 His Kinase A (phosphoacceptor) domain AYR56_RS03655 SM00936 Penicillin-binding protein 5, C-terminal domain AYR56_RS03695 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AYR56_RS03725 SM00855 Phosphoglycerate mutase family AYR56_RS03760 SM00954 Region found in RelA / SpoT proteins AYR56_RS03780 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AYR56_RS03805 SM00226 Low molecular weight phosphatase family AYR56_RS03845 SM00347 helix_turn_helix multiple antibiotic resistance protein AYR56_RS03850 SM00382 ATPases associated with a variety of cellular activities AYR56_RS03875 SM00235 Zinc-dependent metalloprotease AYR56_RS03905 SM00857 Resolvase, N terminal domain AYR56_RS03930 SM00841 Elongation factor P, C-terminal AYR56_RS03930 SM01185 AYR56_RS03930 AYR56_RS03950 SM00422 helix_turn_helix, mercury resistance AYR56_RS03965 SM00919 Malic enzyme, NAD binding domain AYR56_RS03965 SM01274 AYR56_RS03965 AYR56_RS03980 SM00382 ATPases associated with a variety of cellular activities AYR56_RS04030 SM00822 AYR56_RS04030 AYR56_RS04045 SM00422 helix_turn_helix, mercury resistance AYR56_RS04100 SM00287 Bacterial SH3 domain homologues AYR56_RS04100 SM00646 AYR56_RS04100 AYR56_RS04105 SM00387 Histidine kinase-like ATPases AYR56_RS04105 SM00388 His Kinase A (phosphoacceptor) domain AYR56_RS04110 SM00448 cheY-homologous receiver domain AYR56_RS04110 SM00862 Transcriptional regulatory protein, C terminal AYR56_RS04135 SM00421 helix_turn_helix, Lux Regulon AYR56_RS04135 SM00448 cheY-homologous receiver domain AYR56_RS04270 SM01192 AYR56_RS04270 AYR56_RS04270 SM01193 AYR56_RS04270 AYR56_RS04280 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AYR56_RS04295 SM00072 Guanylate kinase homologues. AYR56_RS04330 SM00382 ATPases associated with a variety of cellular activities AYR56_RS04335 SM00062 Bacterial periplasmic substrate-binding proteins AYR56_RS04335 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AYR56_RS04385 SM00487 DEAD-like helicases superfamily AYR56_RS04385 SM00490 helicase superfamily c-terminal domain AYR56_RS04385 SM00982 AYR56_RS04385 AYR56_RS04385 SM01058 CarD-like/TRCF domain AYR56_RS04395 SM00363 S4 RNA-binding domain AYR56_RS04405 SM00316 Ribosomal protein S1-like RNA-binding domain AYR56_RS04410 SM00977 TilS substrate C-terminal domain AYR56_RS04420 SM00382 ATPases associated with a variety of cellular activities AYR56_RS04495 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR56_RS04495 SM00866 AYR56_RS04495 AYR56_RS04560 SM00831 Cation transporter/ATPase, N-terminus AYR56_RS04585 SM00382 ATPases associated with a variety of cellular activities AYR56_RS04590 SM00316 Ribosomal protein S1-like RNA-binding domain AYR56_RS04590 SM00732 Likely ribonuclease with RNase H fold. AYR56_RS04595 SM00731 SprT homologues. AYR56_RS04615 SM00382 ATPases associated with a variety of cellular activities AYR56_RS04680 SM00382 ATPases associated with a variety of cellular activities AYR56_RS04685 SM00382 ATPases associated with a variety of cellular activities AYR56_RS04710 SM00047 Lysozyme subfamily 2 AYR56_RS04725 SM00998 Adenylosuccinate lyase C-terminus AYR56_RS04735 SM00292 breast cancer carboxy-terminal domain AYR56_RS04735 SM00532 Ligase N family AYR56_RS04755 SM00845 GatB domain AYR56_RS04760 SM00046 Diacylglycerol kinase catalytic domain (presumed) AYR56_RS04815 SM00487 DEAD-like helicases superfamily AYR56_RS04815 SM00490 helicase superfamily c-terminal domain AYR56_RS04885 SM01091 Transporter associated domain AYR56_RS04905 SM00382 ATPases associated with a variety of cellular activities AYR56_RS04905 SM01086 C-terminal, D2-small domain, of ClpB protein AYR56_RS05040 SM00849 Metallo-beta-lactamase superfamily AYR56_RS05070 SM01118 AYR56_RS05070 AYR56_RS05075 SM00954 Region found in RelA / SpoT proteins AYR56_RS05090 SM00116 Domain in cystathionine beta-synthase and other proteins. AYR56_RS05090 SM00924 MgtE intracellular N domain AYR56_RS05120 SM01240 AYR56_RS05120 AYR56_RS05145 SM00530 Helix-turn-helix XRE-family like proteins AYR56_RS05150 SM00530 Helix-turn-helix XRE-family like proteins AYR56_RS05155 SM01040 BRO family, N-terminal domain AYR56_RS05200 SM00990 AYR56_RS05200 AYR56_RS05315 SM00507 HNH nucleases AYR56_RS05450 SM00257 Lysin motif AYR56_RS05450 SM00641 Glycosyl hydrolases family 25 AYR56_RS05470 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AYR56_RS05470 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AYR56_RS05470 SM00493 AYR56_RS05470 AYR56_RS05480 SM00843 AYR56_RS05480 AYR56_RS05510 SM00852 Probable molybdopterin binding domain AYR56_RS05515 SM00382 ATPases associated with a variety of cellular activities AYR56_RS05520 SM00322 K homology RNA-binding domain AYR56_RS05520 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYR56_RS05535 SM00487 DEAD-like helicases superfamily AYR56_RS05535 SM00490 helicase superfamily c-terminal domain AYR56_RS05550 SM00957 SecA DEAD-like domain AYR56_RS05550 SM00958 SecA preprotein cross-linking domain AYR56_RS05555 SM00937 AYR56_RS05555 AYR56_RS05565 SM00448 cheY-homologous receiver domain AYR56_RS05565 SM00862 Transcriptional regulatory protein, C terminal AYR56_RS05570 SM00387 Histidine kinase-like ATPases AYR56_RS05570 SM00388 His Kinase A (phosphoacceptor) domain AYR56_RS05590 SM00382 ATPases associated with a variety of cellular activities AYR56_RS05595 SM00382 ATPases associated with a variety of cellular activities AYR56_RS05640 SM00028 Tetratricopeptide repeats AYR56_RS05660 SM00487 DEAD-like helicases superfamily AYR56_RS05660 SM00490 helicase superfamily c-terminal domain AYR56_RS05665 SM00382 ATPases associated with a variety of cellular activities AYR56_RS05725 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AYR56_RS05745 SM00316 Ribosomal protein S1-like RNA-binding domain AYR56_RS05745 SM00955 AYR56_RS05745 AYR56_RS05755 SM00382 ATPases associated with a variety of cellular activities AYR56_RS05760 SM00062 Bacterial periplasmic substrate-binding proteins AYR56_RS05760 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AYR56_RS05780 SM00986 Uracil DNA glycosylase superfamily AYR56_RS05780 SM00987 UreE urease accessory protein, C-terminal domain AYR56_RS05800 SM00479 AYR56_RS05800 AYR56_RS05820 SM00829 Enoylreductase AYR56_RS05825 SM00382 ATPases associated with a variety of cellular activities AYR56_RS06015 SM00448 cheY-homologous receiver domain AYR56_RS06015 SM00862 Transcriptional regulatory protein, C terminal AYR56_RS06020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AYR56_RS06020 SM00387 Histidine kinase-like ATPases AYR56_RS06020 SM00388 His Kinase A (phosphoacceptor) domain AYR56_RS06085 SM00357 Cold shock protein domain AYR56_RS06110 SM00382 ATPases associated with a variety of cellular activities AYR56_RS06115 SM00382 ATPases associated with a variety of cellular activities AYR56_RS06140 SM00937 AYR56_RS06140 AYR56_RS06200 SM00382 ATPases associated with a variety of cellular activities AYR56_RS06245 SM01234 AYR56_RS06245 AYR56_RS06260 SM00382 ATPases associated with a variety of cellular activities AYR56_RS06260 SM00930 AYR56_RS06260 AYR56_RS06275 SM00382 ATPases associated with a variety of cellular activities AYR56_RS06305 SM00861 Transketolase, pyrimidine binding domain AYR56_RS06395 SM00382 ATPases associated with a variety of cellular activities AYR56_RS06415 SM00363 S4 RNA-binding domain AYR56_RS06415 SM01390 AYR56_RS06415 AYR56_RS06420 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AYR56_RS06435 SM00981 AYR56_RS06435 AYR56_RS06460 SM00357 Cold shock protein domain AYR56_RS06495 SM00382 ATPases associated with a variety of cellular activities AYR56_RS06500 SM00062 Bacterial periplasmic substrate-binding proteins AYR56_RS06540 SM00740 AYR56_RS06540 AYR56_RS06565 SM00842 Cell division protein FtsA AYR56_RS06570 SM00864 Tubulin/FtsZ family, GTPase domain AYR56_RS06570 SM00865 Tubulin/FtsZ family, C-terminal domain AYR56_RS06590 SM00363 S4 RNA-binding domain AYR56_RS06655 SM00855 Phosphoglycerate mutase family AYR56_RS06660 SM00028 Tetratricopeptide repeats AYR56_RS06665 SM00382 ATPases associated with a variety of cellular activities AYR56_RS06670 SM00046 Diacylglycerol kinase catalytic domain (presumed) AYR56_RS06675 SM00849 Metallo-beta-lactamase superfamily AYR56_RS06710 SM00838 Elongation factor G C-terminus AYR56_RS06725 SM00878 Biotin carboxylase C-terminal domain AYR56_RS06760 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYR56_RS06770 SM00849 Metallo-beta-lactamase superfamily AYR56_RS06790 SM01387 AYR56_RS06790 AYR56_RS06795 SM01130 AYR56_RS06795 AYR56_RS06800 SM00849 Metallo-beta-lactamase superfamily AYR56_RS06820 SM00382 ATPases associated with a variety of cellular activities AYR56_RS06820 SM00994 ClpX C4-type zinc finger AYR56_RS06820 SM01086 C-terminal, D2-small domain, of ClpB protein AYR56_RS06845 SM00062 Bacterial periplasmic substrate-binding proteins AYR56_RS06850 SM00382 ATPases associated with a variety of cellular activities AYR56_RS06855 SM00465 GIY-YIG type nucleases (URI domain) AYR56_RS06875 SM00420 helix_turn_helix, Deoxyribose operon repressor AYR56_RS06875 SM01134 AYR56_RS06875 AYR56_RS06920 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AYR56_RS06920 SM00940 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal AYR56_RS06975 SM01117 AYR56_RS06975 AYR56_RS07000 SM00841 Elongation factor P, C-terminal AYR56_RS07000 SM01185 AYR56_RS07000 AYR56_RS07060 SM00072 Guanylate kinase homologues. AYR56_RS07065 SM01409 AYR56_RS07065 AYR56_RS07075 SM00487 DEAD-like helicases superfamily AYR56_RS07075 SM00490 helicase superfamily c-terminal domain AYR56_RS07090 SM00331 Sigma factor PP2C-like phosphatases AYR56_RS07090 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AYR56_RS07095 SM00220 Serine/Threonine protein kinases, catalytic domain AYR56_RS07095 SM00740 AYR56_RS07095 AYR56_RS07110 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AYR56_RS07130 SM01120 AYR56_RS07130 AYR56_RS07130 SM01121 AYR56_RS07130 AYR56_RS07135 SM00487 DEAD-like helicases superfamily AYR56_RS07135 SM00490 helicase superfamily c-terminal domain AYR56_RS07150 SM00358 Double-stranded RNA binding motif AYR56_RS07150 SM00535 Ribonuclease III family AYR56_RS07155 SM00968 SMC proteins Flexible Hinge Domain AYR56_RS07165 SM00382 ATPases associated with a variety of cellular activities AYR56_RS07165 SM00962 SRP54-type protein, GTPase domain AYR56_RS07165 SM00963 SRP54-type protein, helical bundle domain AYR56_RS07180 SM00382 ATPases associated with a variety of cellular activities AYR56_RS07180 SM00962 SRP54-type protein, GTPase domain AYR56_RS07180 SM00963 SRP54-type protein, helical bundle domain AYR56_RS07200 SM00422 helix_turn_helix, mercury resistance AYR56_RS07235 SM00829 Enoylreductase AYR56_RS07365 SM00966 SpoVT / AbrB like domain AYR56_RS07440 SM00487 DEAD-like helicases superfamily AYR56_RS07515 SM00382 ATPases associated with a variety of cellular activities AYR56_RS07555 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AYR56_RS07555 SM00245 tail specific protease AYR56_RS07595 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AYR56_RS07595 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AYR56_RS07595 SM00493 AYR56_RS07595 AYR56_RS07615 SM00382 ATPases associated with a variety of cellular activities AYR56_RS07615 SM01086 C-terminal, D2-small domain, of ClpB protein AYR56_RS07625 SM01207 AYR56_RS07625 AYR56_RS07630 SM00387 Histidine kinase-like ATPases AYR56_RS07630 SM00433 TopoisomeraseII AYR56_RS07635 SM00434 DNA Topoisomerase IV AYR56_RS07660 SM01131 AYR56_RS07660 AYR56_RS07690 SM00850 LytTr DNA-binding domain AYR56_RS07705 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AYR56_RS07710 SM00851 MGS-like domain AYR56_RS07710 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AYR56_RS07710 SM01209 AYR56_RS07710 AYR56_RS07715 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AYR56_RS07740 SM00363 S4 RNA-binding domain AYR56_RS07750 SM00986 Uracil DNA glycosylase superfamily AYR56_RS07750 SM00987 UreE urease accessory protein, C-terminal domain AYR56_RS07760 SM00357 Cold shock protein domain AYR56_RS07835 SM00478 endonuclease III AYR56_RS07860 SM00479 AYR56_RS07860 AYR56_RS07860 SM00487 DEAD-like helicases superfamily AYR56_RS07860 SM00491 AYR56_RS07860 AYR56_RS07910 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR56_RS07920 SM00382 ATPases associated with a variety of cellular activities AYR56_RS07925 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR56_RS08020 SM00829 Enoylreductase AYR56_RS08080 SM00028 Tetratricopeptide repeats AYR56_RS08085 SM00411 bacterial (prokaryotic) histone like domain AYR56_RS08095 SM00316 Ribosomal protein S1-like RNA-binding domain AYR56_RS08105 SM00257 Lysin motif AYR56_RS08110 SM00487 DEAD-like helicases superfamily AYR56_RS08110 SM00490 helicase superfamily c-terminal domain AYR56_RS08125 SM00363 S4 RNA-binding domain AYR56_RS08155 SM00316 Ribosomal protein S1-like RNA-binding domain AYR56_RS08175 SM00481 DNA polymerase alpha chain like domain AYR56_RS08185 SM00382 ATPases associated with a variety of cellular activities AYR56_RS08185 SM01086 C-terminal, D2-small domain, of ClpB protein AYR56_RS08210 SM00400 zinc finger AYR56_RS08210 SM00493 AYR56_RS08210 AYR56_RS08265 SM00518 AP endonuclease family 2 AYR56_RS08325 SM00287 Bacterial SH3 domain homologues AYR56_RS08325 SM00646 AYR56_RS08325 AYR56_RS08365 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYR56_RS08365 SM00954 Region found in RelA / SpoT proteins AYR56_RS08430 SM00047 Lysozyme subfamily 2 AYR56_RS08440 SM00838 Elongation factor G C-terminus AYR56_RS08445 SM00271 DnaJ molecular chaperone homology domain AYR56_RS08485 SM00729 Elongator protein 3, MiaB family, Radical SAM AYR56_RS08490 SM00904 Riboflavin kinase AYR56_RS08520 SM00316 Ribosomal protein S1-like RNA-binding domain AYR56_RS08520 SM00322 K homology RNA-binding domain AYR56_RS08530 SM00479 AYR56_RS08530 AYR56_RS08530 SM00481 DNA polymerase alpha chain like domain AYR56_RS08540 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AYR56_RS08590 SM00563 Phosphate acyltransferases AYR56_RS08650 SM01230 AYR56_RS08650 AYR56_RS08655 SM00422 helix_turn_helix, mercury resistance AYR56_RS08675 SM00450 Rhodanese Homology Domain AYR56_RS08745 SM00421 helix_turn_helix, Lux Regulon AYR56_RS08745 SM00448 cheY-homologous receiver domain AYR56_RS08750 SM00387 Histidine kinase-like ATPases AYR56_RS08775 SM00873 B3/4 domain AYR56_RS08775 SM00874 tRNA synthetase B5 domain AYR56_RS08775 SM00896 Ferredoxin-fold anticodon binding domain AYR56_RS08795 SM00967 RNA 2'-O ribose methyltransferase substrate binding AYR56_RS08810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AYR56_RS08810 SM00387 Histidine kinase-like ATPases AYR56_RS08810 SM00388 His Kinase A (phosphoacceptor) domain AYR56_RS08815 SM00448 cheY-homologous receiver domain AYR56_RS08815 SM00862 Transcriptional regulatory protein, C terminal AYR56_RS08820 SM01350 AYR56_RS08820 AYR56_RS08850 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYR56_RS08860 SM01103 AYR56_RS08860 AYR56_RS08875 SM00829 Enoylreductase AYR56_RS08895 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AYR56_RS08920 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AYR56_RS08920 SM01232 AYR56_RS08920 AYR56_RS08925 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AYR56_RS08925 SM00474 3'-5' exonuclease AYR56_RS08925 SM00475 5'-3' exonuclease AYR56_RS08925 SM00482 DNA polymerase A domain AYR56_RS08940 SM00382 ATPases associated with a variety of cellular activities AYR56_RS08940 SM00843 AYR56_RS08940 AYR56_RS08975 SM00382 ATPases associated with a variety of cellular activities AYR56_RS09040 SM00836 DALR anticodon binding domain AYR56_RS09040 SM01016 Arginyl tRNA synthetase N terminal dom AYR56_RS09070 SM00363 S4 RNA-binding domain AYR56_RS09085 SM00014 Acid phosphatase homologues AYR56_RS09230 SM00316 Ribosomal protein S1-like RNA-binding domain AYR56_RS09345 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AYR56_RS09350 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYR56_RS09375 SM01022 AYR56_RS09375 AYR56_RS09415 SM00354 helix_turn _helix lactose operon repressor AYR56_RS09485 SM00529 Helix-turn-helix diphteria tox regulatory element AYR56_RS09485 SM00899 AYR56_RS09485 AYR56_RS09510 SM00905 Dihydroneopterin aldolase AYR56_RS09565 SM00463 Small MutS-related domain AYR56_RS09565 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AYR56_RS09565 SM00534 ATPase domain of DNA mismatch repair MUTS family AYR56_RS09580 SM00732 Likely ribonuclease with RNase H fold. AYR56_RS09590 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AYR56_RS09595 SM00487 DEAD-like helicases superfamily AYR56_RS09595 SM00490 helicase superfamily c-terminal domain AYR56_RS09605 SM00116 Domain in cystathionine beta-synthase and other proteins. AYR56_RS09630 SM01323 AYR56_RS09630 AYR56_RS09645 SM00382 ATPases associated with a variety of cellular activities AYR56_RS09650 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYR56_RS09670 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AYR56_RS09670 SM00534 ATPase domain of DNA mismatch repair MUTS family AYR56_RS09695 SM00883 Chaperonin 10 Kd subunit AYR56_RS09705 SM00881 CoA binding domain AYR56_RS09710 SM00382 ATPases associated with a variety of cellular activities AYR56_RS09745 SM00870 AYR56_RS09745 AYR56_RS09855 SM00641 Glycosyl hydrolases family 25 AYR56_RS10210 SM00487 DEAD-like helicases superfamily AYR56_RS10210 SM00490 helicase superfamily c-terminal domain AYR56_RS10220 SM00493 AYR56_RS10220 AYR56_RS10230 SM00382 ATPases associated with a variety of cellular activities AYR56_RS10250 SM00257 Lysin motif AYR56_RS10350 SM00649 Ribosomal protein L11/L12 AYR56_RS10360 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AYR56_RS10360 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AYR56_RS10410 SM00967 RNA 2'-O ribose methyltransferase substrate binding AYR56_RS10420 SM00840 AYR56_RS10420 AYR56_RS10430 SM00670 Large family of predicted nucleotide-binding domains AYR56_RS10435 SM00382 ATPases associated with a variety of cellular activities AYR56_RS10460 SM00855 Phosphoglycerate mutase family AYR56_RS10495 SM00878 Biotin carboxylase C-terminal domain AYR56_RS10580 SM00382 ATPases associated with a variety of cellular activities AYR56_RS10585 SM00382 ATPases associated with a variety of cellular activities AYR56_RS10595 SM00662 RNA polymerases D AYR56_RS10610 SM00316 Ribosomal protein S1-like RNA-binding domain AYR56_RS10665 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AYR56_RS10670 SM01374 AYR56_RS10670 AYR56_RS10690 SM00322 K homology RNA-binding domain AYR56_RS10705 SM01382 AYR56_RS10705 AYR56_RS10705 SM01383 AYR56_RS10705 AYR56_RS10725 SM01403 AYR56_RS10725 AYR56_RS10735 SM00838 Elongation factor G C-terminus AYR56_RS10735 SM00889 Elongation factor G, domain IV AYR56_RS10755 SM00663 RNA polymerase I subunit A N-terminus AYR56_RS10775 SM00382 ATPases associated with a variety of cellular activities AYR56_RS10775 SM01086 C-terminal, D2-small domain, of ClpB protein AYR56_RS10860 SM00100 Cyclic nucleotide-monophosphate binding domain AYR56_RS10860 SM00419 helix_turn_helix, cAMP Regulatory protein AYR56_RS10930 SM00341 Helicase and RNase D C-terminal AYR56_RS10930 SM00487 DEAD-like helicases superfamily AYR56_RS10930 SM00490 helicase superfamily c-terminal domain AYR56_RS10930 SM00956 AYR56_RS10930 AYR56_RS10945 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR56_RS10950 SM00382 ATPases associated with a variety of cellular activities AYR56_RS10970 SM00422 helix_turn_helix, mercury resistance AYR56_RS10990 SM00829 Enoylreductase AYR56_RS10995 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AYR56_RS11000 SM00829 Enoylreductase AYR56_RS11010 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AYR56_RS11020 SM00347 helix_turn_helix multiple antibiotic resistance protein AYR56_RS11045 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AYR56_RS11050 SM00382 ATPases associated with a variety of cellular activities AYR56_RS11060 SM00387 Histidine kinase-like ATPases AYR56_RS11060 SM00388 His Kinase A (phosphoacceptor) domain AYR56_RS11065 SM00448 cheY-homologous receiver domain AYR56_RS11065 SM00862 Transcriptional regulatory protein, C terminal AYR56_RS11075 SM00382 ATPases associated with a variety of cellular activities AYR56_RS11095 SM00530 Helix-turn-helix XRE-family like proteins AYR56_RS11200 SM00855 Phosphoglycerate mutase family AYR56_RS11210 SM00116 Domain in cystathionine beta-synthase and other proteins. AYR56_RS11245 SM01005 Alanine racemase, C-terminal domain AYR56_RS11255 SM00487 DEAD-like helicases superfamily AYR56_RS11255 SM00490 helicase superfamily c-terminal domain AYR56_RS11295 SM00357 Cold shock protein domain AYR56_RS11295 SM00382 ATPases associated with a variety of cellular activities AYR56_RS11295 SM00959 Rho termination factor, N-terminal domain AYR56_RS11320 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYR56_RS11345 SM01400 AYR56_RS11345 AYR56_RS11380 SM00650 Ribosomal RNA adenine dimethylases AYR56_RS11385 SM00493 AYR56_RS11385 AYR56_RS11425 SM00830 Chorismate mutase type II AYR56_RS11470 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR56_RS11515 SM00859 Semialdehyde dehydrogenase, NAD binding domain AYR56_RS11520 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AYR56_RS11525 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AYR56_RS11575 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYR56_RS11575 SM00866 AYR56_RS11575 AYR56_RS11660 SM00116 Domain in cystathionine beta-synthase and other proteins. AYR56_RS11660 SM01091 Transporter associated domain AYR56_RS11670 SM00155 Phospholipase D. Active site motifs. AYR56_RS11765 SM00062 Bacterial periplasmic substrate-binding proteins AYR56_RS11780 SM00382 ATPases associated with a variety of cellular activities AYR56_RS11830 SM00892 DNA/RNA non-specific endonuclease AYR56_RS11835 SM00257 Lysin motif AYR56_RS11850 SM01120 AYR56_RS11850 AYR56_RS11865 SM01266 AYR56_RS11865 AYR56_RS11885 SM00382 ATPases associated with a variety of cellular activities AYR56_RS11890 SM00062 Bacterial periplasmic substrate-binding proteins AYR56_RS11890 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AYR56_RS11955 SM01131 AYR56_RS11955 AYR56_RS11970 SM00257 Lysin motif AYR56_RS11975 SM00347 helix_turn_helix multiple antibiotic resistance protein AYR56_RS11995 SM00357 Cold shock protein domain AYR56_RS12030 SM00382 ATPases associated with a variety of cellular activities AYR56_RS12070 SM00382 ATPases associated with a variety of cellular activities AYR56_RS12080 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AYR56_RS12080 SM00387 Histidine kinase-like ATPases AYR56_RS12080 SM00388 His Kinase A (phosphoacceptor) domain AYR56_RS12085 SM00448 cheY-homologous receiver domain AYR56_RS12085 SM00862 Transcriptional regulatory protein, C terminal AYR56_RS12160 SM00822 AYR56_RS12160 AYR56_RS12235 SM00878 Biotin carboxylase C-terminal domain AYR56_RS12245 SM00797 Allophanate hydrolase subunit 2 AYR56_RS12250 SM00796 Allophanate hydrolase subunit 1 AYR56_RS12560 SM01134 AYR56_RS12560