locus-tag class description LCU_RS00170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCU_RS00170 PF03466 LysR substrate binding domain LCU_RS00175 PF00390 Malic enzyme, N-terminal domain LCU_RS00175 PF03949 Malic enzyme, NAD binding domain LCU_RS00185 PF01042 Endoribonuclease L-PSP LCU_RS00200 PF01180 Dihydroorotate dehydrogenase LCU_RS00205 PF13419 Haloacid dehalogenase-like hydrolase LCU_RS00210 PF00375 Sodium:dicarboxylate symporter family LCU_RS00215 PF03830 PTS system sorbose subfamily IIB component LCU_RS00215 PF03610 PTS system fructose IIA component LCU_RS00220 PF03609 PTS system sorbose-specific iic component LCU_RS00225 PF03613 PTS system mannose/fructose/sorbose family IID component LCU_RS00255 PF01925 Sulfite exporter TauE/SafE LCU_RS00270 PF13439 Glycosyltransferase Family 4 LCU_RS00270 PF00534 Glycosyl transferases group 1 LCU_RS00280 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LCU_RS00280 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LCU_RS00290 PF00884 Sulfatase LCU_RS00295 PF01475 Ferric uptake regulator family LCU_RS00345 PF00438 S-adenosylmethionine synthetase, N-terminal domain LCU_RS00345 PF02772 S-adenosylmethionine synthetase, central domain LCU_RS00345 PF02773 S-adenosylmethionine synthetase, C-terminal domain LCU_RS00350 PF07690 Major Facilitator Superfamily LCU_RS00355 PF10282 Lactonase, 7-bladed beta-propeller LCU_RS00365 PF01594 AI-2E family transporter LCU_RS00370 PF13673 Acetyltransferase (GNAT) domain LCU_RS00375 PF00478 IMP dehydrogenase / GMP reductase domain LCU_RS00385 PF13847 Methyltransferase domain LCU_RS00390 PF00588 SpoU rRNA Methylase family LCU_RS00400 PF09397 Ftsk gamma domain LCU_RS00400 PF01580 FtsK/SpoIIIE family LCU_RS00400 PF17854 FtsK alpha domain LCU_RS00405 PF05193 Peptidase M16 inactive domain LCU_RS00410 PF05193 Peptidase M16 inactive domain LCU_RS00410 PF00675 Insulinase (Peptidase family M16) LCU_RS00420 PF13464 Domain of unknown function (DUF4115) LCU_RS00425 PF01066 CDP-alcohol phosphatidyltransferase LCU_RS00430 PF00154 recA bacterial DNA recombination protein LCU_RS00435 PF01966 HD domain LCU_RS00435 PF12072 Domain of unknown function (DUF3552) LCU_RS00435 PF00013 KH domain LCU_RS00445 PF00953 Glycosyl transferase family 4 LCU_RS00450 PF01205 Uncharacterized protein family UPF0029 LCU_RS00450 PF09186 Domain of unknown function (DUF1949) LCU_RS00455 PF04851 Type III restriction enzyme, res subunit LCU_RS00455 PF00271 Helicase conserved C-terminal domain LCU_RS00465 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LCU_RS00465 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LCU_RS00470 PF07517 SecA DEAD-like domain LCU_RS00470 PF07516 SecA Wing and Scaffold domain LCU_RS00470 PF01043 SecA preprotein cross-linking domain LCU_RS00480 PF00005 ABC transporter LCU_RS00485 PF18075 FtsX extracellular domain LCU_RS00485 PF02687 FtsX-like permease family LCU_RS00490 PF17820 PDZ domain LCU_RS00495 PF00486 Transcriptional regulatory protein, C terminal LCU_RS00495 PF00072 Response regulator receiver domain LCU_RS00500 PF16736 Single Cache-like LCU_RS00500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCU_RS00500 PF00989 PAS fold LCU_RS00500 PF00512 His Kinase A (phospho-acceptor) domain LCU_RS00505 PF12849 PBP superfamily domain LCU_RS00510 PF00528 Binding-protein-dependent transport system inner membrane component LCU_RS00515 PF00528 Binding-protein-dependent transport system inner membrane component LCU_RS00520 PF00005 ABC transporter LCU_RS00525 PF00005 ABC transporter LCU_RS00530 PF01895 PhoU domain LCU_RS00545 PF04024 PspC domain LCU_RS00555 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV LCU_RS00560 PF02603 HPr Serine kinase N terminus LCU_RS00560 PF07475 HPr Serine kinase C-terminal domain LCU_RS00565 PF01790 Prolipoprotein diacylglyceryl transferase LCU_RS00570 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LCU_RS00570 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LCU_RS00580 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCU_RS00585 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LCU_RS00585 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LCU_RS00585 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LCU_RS00585 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LCU_RS00595 PF02151 UvrB/uvrC motif LCU_RS00595 PF17757 UvrB interaction domain LCU_RS00595 PF04851 Type III restriction enzyme, res subunit LCU_RS00595 PF00271 Helicase conserved C-terminal domain LCU_RS00595 PF12344 Ultra-violet resistance protein B LCU_RS00600 PF17760 UvrA interaction domain LCU_RS00600 PF17755 UvrA DNA-binding domain LCU_RS00600 PF00005 ABC transporter LCU_RS00610 PF03668 P-loop ATPase protein family LCU_RS00615 PF01933 Uncharacterised protein family UPF0052 LCU_RS00620 PF02650 WhiA C-terminal HTH domain LCU_RS00620 PF10298 WhiA N-terminal LAGLIDADG-like domain LCU_RS00620 PF14527 WhiA LAGLIDADG-like domain LCU_RS00625 PF01047 MarR family LCU_RS00635 PF00574 Clp protease LCU_RS00645 PF01915 Glycosyl hydrolase family 3 C-terminal domain LCU_RS00645 PF00933 Glycosyl hydrolase family 3 N terminal domain LCU_RS00645 PF14310 Fibronectin type III-like domain LCU_RS00650 PF00356 Bacterial regulatory proteins, lacI family LCU_RS00655 PF01156 Inosine-uridine preferring nucleoside hydrolase LCU_RS00695 PF08240 Alcohol dehydrogenase GroES-like domain LCU_RS00695 PF00107 Zinc-binding dehydrogenase LCU_RS00700 PF02245 Methylpurine-DNA glycosylase (MPG) LCU_RS00705 PF00005 ABC transporter LCU_RS00715 PF07730 Histidine kinase LCU_RS00715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCU_RS00720 PF07730 Histidine kinase LCU_RS00735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCU_RS00740 PF02566 OsmC-like protein LCU_RS00795 PF00291 Pyridoxal-phosphate dependent enzyme LCU_RS00810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCU_RS00810 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCU_RS00820 PF03009 Glycerophosphoryl diester phosphodiesterase family LCU_RS00840 PF13936 Helix-turn-helix domain LCU_RS00840 PF00665 Integrase core domain LCU_RS00850 PF04198 Putative sugar-binding domain LCU_RS00855 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LCU_RS00855 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LCU_RS00860 PF00162 Phosphoglycerate kinase LCU_RS00865 PF00121 Triosephosphate isomerase LCU_RS00870 PF03952 Enolase, N-terminal domain LCU_RS00870 PF00113 Enolase, C-terminal TIM barrel domain LCU_RS00875 PF08279 HTH domain LCU_RS00875 PF05043 Mga helix-turn-helix domain LCU_RS00875 PF00874 PRD domain LCU_RS00875 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCU_RS00880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCU_RS00885 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LCU_RS00885 PF02378 Phosphotransferase system, EIIC LCU_RS00885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCU_RS00890 PF01316 Arginine repressor, DNA binding domain LCU_RS00890 PF02863 Arginine repressor, C-terminal domain LCU_RS00895 PF01479 S4 domain LCU_RS00895 PF00849 RNA pseudouridylate synthase LCU_RS00900 PF00912 Transglycosylase LCU_RS00900 PF00905 Penicillin binding protein transpeptidase domain LCU_RS00905 PF06133 Control of competence regulator ComK, YlbF/YmcA LCU_RS00910 PF00149 Calcineurin-like phosphoesterase LCU_RS00915 PF13514 AAA domain LCU_RS00920 PF01966 HD domain LCU_RS00920 PF01336 OB-fold nucleic acid binding domain LCU_RS00935 PF01230 HIT domain LCU_RS00940 PF00005 ABC transporter LCU_RS00945 PF05975 Bacterial ABC transporter protein EcsB LCU_RS00950 PF01636 Phosphotransferase enzyme family LCU_RS00955 PF02390 Putative methyltransferase LCU_RS00965 PF00085 Thioredoxin LCU_RS00970 PF01588 Putative tRNA binding domain LCU_RS00970 PF14794 Domain of unknown function (DUF4479) LCU_RS00975 PF13537 Glutamine amidotransferase domain LCU_RS00975 PF00733 Asparagine synthase LCU_RS00980 PF08245 Mur ligase middle domain LCU_RS00980 PF02875 Mur ligase family, glutamate ligase domain LCU_RS00980 PF01225 Mur ligase family, catalytic domain LCU_RS00985 PF01027 Inhibitor of apoptosis-promoting Bax1 LCU_RS01000 PF03061 Thioesterase superfamily LCU_RS01005 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LCU_RS01005 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LCU_RS01005 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal LCU_RS01015 PF03819 MazG nucleotide pyrophosphohydrolase domain LCU_RS01020 PF00313 'Cold-shock' DNA-binding domain LCU_RS01035 PF00144 Beta-lactamase LCU_RS01050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LCU_RS01050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LCU_RS01055 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LCU_RS01055 PF01266 FAD dependent oxidoreductase LCU_RS01060 PF00230 Major intrinsic protein LCU_RS01065 PF00731 AIR carboxylase LCU_RS01070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCU_RS01070 PF02222 ATP-grasp domain LCU_RS01070 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LCU_RS01075 PF00206 Lyase LCU_RS01075 PF10397 Adenylosuccinate lyase C-terminus LCU_RS01080 PF01259 SAICAR synthetase LCU_RS01085 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LCU_RS01095 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LCU_RS01095 PF00586 AIR synthase related protein, N-terminal domain LCU_RS01095 PF02769 AIR synthase related protein, C-terminal domain LCU_RS01100 PF13537 Glutamine amidotransferase domain LCU_RS01100 PF00156 Phosphoribosyl transferase domain LCU_RS01105 PF00586 AIR synthase related protein, N-terminal domain LCU_RS01105 PF02769 AIR synthase related protein, C-terminal domain LCU_RS01110 PF00551 Formyl transferase LCU_RS01115 PF01808 AICARFT/IMPCHase bienzyme LCU_RS01115 PF02142 MGS-like domain LCU_RS01120 PF02844 Phosphoribosylglycinamide synthetase, N domain LCU_RS01120 PF02843 Phosphoribosylglycinamide synthetase, C domain LCU_RS01120 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LCU_RS01140 PF00829 Ribosomal prokaryotic L21 protein LCU_RS01150 PF01016 Ribosomal L27 protein LCU_RS01155 PF01132 Elongation factor P (EF-P) OB domain LCU_RS01155 PF09285 Elongation factor P, C-terminal LCU_RS01155 PF08207 Elongation factor P (EF-P) KOW-like domain LCU_RS01160 PF03780 Asp23 family, cell envelope-related function LCU_RS01165 PF01029 NusB family LCU_RS01170 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LCU_RS01170 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LCU_RS01175 PF02601 Exonuclease VII, large subunit LCU_RS01175 PF13742 OB-fold nucleic acid binding domain LCU_RS01180 PF02609 Exonuclease VII small subunit LCU_RS01185 PF00348 Polyprenyl synthetase LCU_RS01190 PF01728 FtsJ-like methyltransferase LCU_RS01190 PF01479 S4 domain LCU_RS01195 PF01316 Arginine repressor, DNA binding domain LCU_RS01195 PF02863 Arginine repressor, C-terminal domain LCU_RS01200 PF02463 RecF/RecN/SMC N terminal domain LCU_RS01215 PF00625 Guanylate kinase LCU_RS01220 PF01192 RNA polymerase Rpb6 LCU_RS01225 PF02441 Flavoprotein LCU_RS01225 PF04127 DNA / pantothenate metabolism flavoprotein LCU_RS01230 PF00271 Helicase conserved C-terminal domain LCU_RS01230 PF18074 Primosomal protein N C-terminal domain LCU_RS01230 PF17764 3′ DNA-binding domain (3′BD) LCU_RS01230 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LCU_RS01230 PF04851 Type III restriction enzyme, res subunit LCU_RS01235 PF02911 Formyl transferase, C-terminal domain LCU_RS01235 PF00551 Formyl transferase LCU_RS01240 PF01189 16S rRNA methyltransferase RsmB/F LCU_RS01240 PF01029 NusB family LCU_RS01250 PF00069 Protein kinase domain LCU_RS01250 PF03793 PASTA domain LCU_RS01255 PF03193 RsgA GTPase LCU_RS01255 PF16745 RsgA N-terminal domain LCU_RS01260 PF00834 Ribulose-phosphate 3 epimerase family LCU_RS01265 PF04263 Thiamin pyrophosphokinase, catalytic domain LCU_RS01265 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain LCU_RS01270 PF00830 Ribosomal L28 family LCU_RS01275 PF03780 Asp23 family, cell envelope-related function LCU_RS01280 PF13684 Dihydroxyacetone kinase family LCU_RS01280 PF02734 DAK2 domain LCU_RS01285 PF17191 RecG wedge domain LCU_RS01285 PF00271 Helicase conserved C-terminal domain LCU_RS01285 PF00270 DEAD/DEAH box helicase LCU_RS01290 PF02504 Fatty acid synthesis protein LCU_RS01295 PF00550 Phosphopantetheine attachment site LCU_RS01300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LCU_RS01305 PF00528 Binding-protein-dependent transport system inner membrane component LCU_RS01310 PF00528 Binding-protein-dependent transport system inner membrane component LCU_RS01310 PF12911 N-terminal TM domain of oligopeptide transport permease C LCU_RS01315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCU_RS01315 PF00005 ABC transporter LCU_RS01320 PF00005 ABC transporter LCU_RS01320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LCU_RS01325 PF00035 Double-stranded RNA binding motif LCU_RS01325 PF14622 Ribonuclease-III-like LCU_RS01330 PF02463 RecF/RecN/SMC N terminal domain LCU_RS01330 PF06470 SMC proteins Flexible Hinge Domain LCU_RS01335 PF02881 SRP54-type protein, helical bundle domain LCU_RS01335 PF00448 SRP54-type protein, GTPase domain LCU_RS01340 PF02595 Glycerate kinase family LCU_RS01350 PF04297 Putative helix-turn-helix protein, YlxM / p13 like LCU_RS01355 PF00448 SRP54-type protein, GTPase domain LCU_RS01355 PF02881 SRP54-type protein, helical bundle domain LCU_RS01355 PF02978 Signal peptide binding domain LCU_RS01360 PF00886 Ribosomal protein S16 LCU_RS01370 PF05239 PRC-barrel domain LCU_RS01370 PF01782 RimM N-terminal domain LCU_RS01375 PF01746 tRNA (Guanine-1)-methyltransferase LCU_RS01380 PF01245 Ribosomal protein L19 LCU_RS01415 PF04073 Aminoacyl-tRNA editing domain LCU_RS01435 PF04452 RNA methyltransferase LCU_RS01445 PF04607 Region found in RelA / SpoT proteins LCU_RS01445 PF13291 ACT domain LCU_RS01445 PF02824 TGS domain LCU_RS01450 PF02580 D-Tyr-tRNA(Tyr) deacylase LCU_RS01455 PF08645 Polynucleotide kinase 3 phosphatase LCU_RS01470 PF02381 MraZ protein, putative antitoxin-like LCU_RS01475 PF01795 MraW methylase family LCU_RS01485 PF03793 PASTA domain LCU_RS01485 PF03717 Penicillin-binding Protein dimerisation domain LCU_RS01485 PF00905 Penicillin binding protein transpeptidase domain LCU_RS01490 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LCU_RS01490 PF00953 Glycosyl transferase family 4 LCU_RS01495 PF08245 Mur ligase middle domain LCU_RS01495 PF02875 Mur ligase family, glutamate ligase domain LCU_RS01500 PF04101 Glycosyltransferase family 28 C-terminal domain LCU_RS01500 PF03033 Glycosyltransferase family 28 N-terminal domain LCU_RS01505 PF03799 Cell division protein FtsQ LCU_RS01510 PF02491 SHS2 domain inserted in FTSA LCU_RS01510 PF11983 Membrane-attachment and polymerisation-promoting switch LCU_RS01515 PF00091 Tubulin/FtsZ family, GTPase domain LCU_RS01515 PF12327 FtsZ family, C-terminal domain LCU_RS01520 PF04472 Cell division protein SepF LCU_RS01530 PF01479 S4 domain LCU_RS01530 PF17774 Putative RNA-binding domain in YlmH LCU_RS01535 PF05103 DivIVA protein LCU_RS01540 PF00133 tRNA synthetases class I (I, L, M and V) LCU_RS01540 PF08264 Anticodon-binding domain of tRNA LCU_RS01540 PF06827 Zinc finger found in FPG and IleRS LCU_RS01565 PF01751 Toprim domain LCU_RS01565 PF01131 DNA topoisomerase LCU_RS01570 PF01223 DNA/RNA non-specific endonuclease LCU_RS01575 PF00356 Bacterial regulatory proteins, lacI family LCU_RS01580 PF00288 GHMP kinases N terminal domain LCU_RS01580 PF08544 GHMP kinases C terminal LCU_RS01580 PF10509 Galactokinase galactose-binding signature LCU_RS01585 PF16363 GDP-mannose 4,6 dehydratase LCU_RS01590 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LCU_RS01590 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LCU_RS01595 PF01263 Aldose 1-epimerase LCU_RS01600 PF00313 'Cold-shock' DNA-binding domain LCU_RS01605 PF00579 tRNA synthetases class I (W and Y) LCU_RS01605 PF01479 S4 domain LCU_RS01615 PF07690 Major Facilitator Superfamily LCU_RS01620 PF05816 Toxic anion resistance protein (TelA) LCU_RS01630 PF00293 NUDIX domain LCU_RS01640 PF01048 Phosphorylase superfamily LCU_RS01660 PF00005 ABC transporter LCU_RS01665 PF02361 Cobalt transport protein LCU_RS01670 PF01891 Cobalt uptake substrate-specific transmembrane region LCU_RS01670 PF13190 PDGLE domain LCU_RS01675 PF13545 Crp-like helix-turn-helix domain LCU_RS01680 PF09861 Lactate racemase N-terminal domain LCU_RS01685 PF00731 AIR carboxylase LCU_RS01690 PF01969 Protein of unknown function DUF111 LCU_RS01695 PF01969 Protein of unknown function DUF111 LCU_RS01700 PF00230 Major intrinsic protein LCU_RS01710 PF02540 NAD synthase LCU_RS01715 PF00266 Aminotransferase class-V LCU_RS01730 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCU_RS01730 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCU_RS01745 PF14490 Helix-hairpin-helix containing domain LCU_RS01745 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LCU_RS01745 PF13538 UvrD-like helicase C-terminal domain LCU_RS01755 PF00781 Diacylglycerol kinase catalytic domain LCU_RS01760 PF00753 Metallo-beta-lactamase superfamily LCU_RS01760 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LCU_RS01760 PF17770 Ribonuclease J C-terminal domain LCU_RS01765 PF07288 Protein of unknown function (DUF1447) LCU_RS01775 PF00005 ABC transporter LCU_RS01775 PF00664 ABC transporter transmembrane region LCU_RS01780 PF00005 ABC transporter LCU_RS01780 PF00664 ABC transporter transmembrane region LCU_RS01785 PF01327 Polypeptide deformylase LCU_RS01795 PF00676 Dehydrogenase E1 component LCU_RS01800 PF02780 Transketolase, C-terminal domain LCU_RS01800 PF02779 Transketolase, pyrimidine binding domain LCU_RS01805 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LCU_RS01805 PF00364 Biotin-requiring enzyme LCU_RS01805 PF02817 e3 binding domain LCU_RS01810 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCU_RS01810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCU_RS01815 PF05256 Uncharacterised protein family (UPF0223) LCU_RS01820 PF00459 Inositol monophosphatase family LCU_RS01825 PF14492 Elongation Factor G, domain II LCU_RS01825 PF03144 Elongation factor Tu domain 2 LCU_RS01825 PF00679 Elongation factor G C-terminus LCU_RS01825 PF00009 Elongation factor Tu GTP binding domain LCU_RS01830 PF07408 Protein of unknown function (DUF1507) LCU_RS01835 PF01098 Cell cycle protein LCU_RS01845 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) LCU_RS01855 PF01467 Cytidylyltransferase-like LCU_RS01860 PF05362 Lon protease (S16) C-terminal proteolytic domain LCU_RS01860 PF13180 PDZ domain LCU_RS01865 PF10531 SLBB domain LCU_RS01870 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LCU_RS01875 PF13567 Domain of unknown function (DUF4131) LCU_RS01875 PF03772 Competence protein LCU_RS01875 PF00753 Metallo-beta-lactamase superfamily LCU_RS01880 PF06144 DNA polymerase III, delta subunit LCU_RS01885 PF01649 Ribosomal protein S20 LCU_RS01890 PF00312 Ribosomal protein S15 LCU_RS01895 PF17770 Ribonuclease J C-terminal domain LCU_RS01895 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LCU_RS01895 PF00753 Metallo-beta-lactamase superfamily LCU_RS01905 PF03144 Elongation factor Tu domain 2 LCU_RS01905 PF03143 Elongation factor Tu C-terminal domain LCU_RS01905 PF00009 Elongation factor Tu GTP binding domain LCU_RS01910 PF05697 Bacterial trigger factor protein (TF) LCU_RS01910 PF05698 Bacterial trigger factor protein (TF) C-terminus LCU_RS01910 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LCU_RS01915 PF06689 ClpX C4-type zinc finger LCU_RS01915 PF10431 C-terminal, D2-small domain, of ClpB protein LCU_RS01915 PF07724 AAA domain (Cdc48 subfamily) LCU_RS01920 PF01926 50S ribosome-binding GTPase LCU_RS01930 PF00528 Binding-protein-dependent transport system inner membrane component LCU_RS01935 PF00005 ABC transporter LCU_RS01940 PF08459 UvrC Helix-hairpin-helix N-terminal LCU_RS01940 PF02151 UvrB/uvrC motif LCU_RS01940 PF01541 GIY-YIG catalytic domain LCU_RS01975 PF01047 MarR family LCU_RS01985 PF16193 AAA C-terminal domain LCU_RS01985 PF00004 ATPase family associated with various cellular activities (AAA) LCU_RS01985 PF12002 MgsA AAA+ ATPase C terminal LCU_RS01990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCU_RS01990 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LCU_RS01995 PF00294 pfkB family carbohydrate kinase LCU_RS02000 PF08220 DeoR-like helix-turn-helix domain LCU_RS02000 PF00455 DeoR C terminal sensor domain LCU_RS02010 PF01018 GTP1/OBG LCU_RS02010 PF09269 Domain of unknown function (DUF1967) LCU_RS02010 PF01926 50S ribosome-binding GTPase LCU_RS02015 PF01757 Acyltransferase family LCU_RS02020 PF00753 Metallo-beta-lactamase superfamily LCU_RS02020 PF12706 Beta-lactamase superfamily domain LCU_RS02025 PF00106 short chain dehydrogenase LCU_RS02030 PF06305 Lipopolysaccharide assembly protein A domain LCU_RS02040 PF10431 C-terminal, D2-small domain, of ClpB protein LCU_RS02040 PF00004 ATPase family associated with various cellular activities (AAA) LCU_RS02040 PF07724 AAA domain (Cdc48 subfamily) LCU_RS02040 PF17871 AAA lid domain LCU_RS02040 PF02861 Clp amino terminal domain, pathogenicity island component LCU_RS02045 PF01783 Ribosomal L32p protein family LCU_RS02055 PF13520 Amino acid permease LCU_RS02070 PF02811 PHP domain LCU_RS02070 PF07733 Bacterial DNA polymerase III alpha NTPase domain LCU_RS02070 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LCU_RS02070 PF14579 Helix-hairpin-helix motif LCU_RS02070 PF01336 OB-fold nucleic acid binding domain LCU_RS02075 PF00365 Phosphofructokinase LCU_RS02080 PF02887 Pyruvate kinase, alpha/beta domain LCU_RS02080 PF00224 Pyruvate kinase, barrel domain LCU_RS02080 PF00391 PEP-utilising enzyme, mobile domain LCU_RS02085 PF04284 Protein of unknown function (DUF441) LCU_RS02090 PF13509 S1 domain LCU_RS02090 PF17783 CvfB-like winged helix domain LCU_RS02095 PF01475 Ferric uptake regulator family LCU_RS02100 PF02899 Phage integrase, N-terminal SAM-like domain LCU_RS02100 PF00589 Phage integrase family LCU_RS02110 PF02616 Segregation and condensation protein ScpA LCU_RS02115 PF04079 Segregation and condensation complex subunit ScpB LCU_RS02120 PF01479 S4 domain LCU_RS02120 PF00849 RNA pseudouridylate synthase LCU_RS02125 PF12822 ECF transporter, substrate-specific component LCU_RS02140 PF00270 DEAD/DEAH box helicase LCU_RS02140 PF00271 Helicase conserved C-terminal domain LCU_RS02150 PF02224 Cytidylate kinase LCU_RS02155 PF00575 S1 RNA binding domain LCU_RS02160 PF01926 50S ribosome-binding GTPase LCU_RS02160 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LCU_RS02165 PF00216 Bacterial DNA-binding protein LCU_RS02175 PF00005 ABC transporter LCU_RS02175 PF02687 FtsX-like permease family LCU_RS02175 PF12704 MacB-like periplasmic core domain LCU_RS02195 PF07690 Major Facilitator Superfamily LCU_RS02200 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LCU_RS02200 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LCU_RS02205 PF13735 tRNA nucleotidyltransferase domain 2 putative LCU_RS02205 PF12627 Probable RNA and SrmB- binding site of polymerase A LCU_RS02205 PF01743 Poly A polymerase head domain LCU_RS02215 PF00005 ABC transporter LCU_RS02215 PF12848 ABC transporter LCU_RS02215 PF16326 ABC transporter C-terminal domain LCU_RS02220 PF00303 Thymidylate synthase LCU_RS02225 PF00186 Dihydrofolate reductase LCU_RS02230 PF02645 Uncharacterised protein, DegV family COG1307 LCU_RS02235 PF13472 GDSL-like Lipase/Acylhydrolase family LCU_RS02245 PF06855 YozE SAM-like fold LCU_RS02250 PF10502 Signal peptidase, peptidase S26 LCU_RS02255 PF01926 50S ribosome-binding GTPase LCU_RS02260 PF01351 Ribonuclease HII LCU_RS02330 PF05866 Endodeoxyribonuclease RusA LCU_RS02340 PF00436 Single-strand binding protein family LCU_RS02350 PF00145 C-5 cytosine-specific DNA methylase LCU_RS02520 PF02481 DNA recombination-mediator protein A LCU_RS02520 PF17782 DprA winged helix domain LCU_RS02525 PF05368 NmrA-like family LCU_RS02530 PF02082 Transcriptional regulator LCU_RS02535 PF01131 DNA topoisomerase LCU_RS02535 PF01751 Toprim domain LCU_RS02535 PF01396 Topoisomerase DNA binding C4 zinc finger LCU_RS02540 PF01134 Glucose inhibited division protein A LCU_RS02545 PF02899 Phage integrase, N-terminal SAM-like domain LCU_RS02545 PF00589 Phage integrase family LCU_RS02550 PF00227 Proteasome subunit LCU_RS02555 PF00004 ATPase family associated with various cellular activities (AAA) LCU_RS02555 PF07724 AAA domain (Cdc48 subfamily) LCU_RS02555 PF10431 C-terminal, D2-small domain, of ClpB protein LCU_RS02565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LCU_RS02565 PF00205 Thiamine pyrophosphate enzyme, central domain LCU_RS02565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LCU_RS02570 PF03306 Alpha-acetolactate decarboxylase LCU_RS02575 PF08543 Phosphomethylpyrimidine kinase LCU_RS02580 PF00005 ABC transporter LCU_RS02585 PF03649 Uncharacterised protein family (UPF0014) LCU_RS02590 PF02660 Glycerol-3-phosphate acyltransferase LCU_RS02600 PF03989 DNA gyrase C-terminal domain, beta-propeller LCU_RS02600 PF00521 DNA gyrase/topoisomerase IV, subunit A LCU_RS02605 PF02901 Pyruvate formate lyase-like LCU_RS02605 PF01228 Glycine radical LCU_RS02610 PF04055 Radical SAM superfamily LCU_RS02615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCU_RS02615 PF03466 LysR substrate binding domain LCU_RS02620 PF02833 DHHA2 domain LCU_RS02620 PF01368 DHH family LCU_RS02630 PF00403 Heavy-metal-associated domain LCU_RS02635 PF09515 Thiamine transporter protein (Thia_YuaJ) LCU_RS02640 PF00589 Phage integrase family LCU_RS02645 PF12697 Alpha/beta hydrolase family LCU_RS02675 PF00440 Bacterial regulatory proteins, tetR family LCU_RS02680 PF02645 Uncharacterised protein, DegV family COG1307 LCU_RS02685 PF03006 Haemolysin-III related LCU_RS02695 PF02645 Uncharacterised protein, DegV family COG1307 LCU_RS02705 PF05670 NFACT protein RNA binding domain LCU_RS02710 PF00156 Phosphoribosyl transferase domain LCU_RS02715 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LCU_RS02720 PF01180 Dihydroorotate dehydrogenase LCU_RS02725 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LCU_RS02725 PF00970 Oxidoreductase FAD-binding domain LCU_RS02730 PF02142 MGS-like domain LCU_RS02730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LCU_RS02730 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LCU_RS02735 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LCU_RS02735 PF00117 Glutamine amidotransferase class-I LCU_RS02740 PF01979 Amidohydrolase family LCU_RS02745 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LCU_RS02745 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LCU_RS02750 PF00860 Permease family LCU_RS02755 PF00156 Phosphoribosyl transferase domain LCU_RS02760 PF01479 S4 domain LCU_RS02760 PF00849 RNA pseudouridylate synthase LCU_RS02765 PF01252 Signal peptidase (SPase) II LCU_RS02770 PF01268 Formate--tetrahydrofolate ligase LCU_RS02775 PF00313 'Cold-shock' DNA-binding domain LCU_RS02785 PF13456 Reverse transcriptase-like LCU_RS02790 PF13091 PLD-like domain LCU_RS02790 PF13396 Phospholipase_D-nuclease N-terminal LCU_RS02795 PF03960 ArsC family LCU_RS02800 PF08343 Ribonucleotide reductase N-terminal LCU_RS02800 PF00317 Ribonucleotide reductase, all-alpha domain LCU_RS02800 PF02867 Ribonucleotide reductase, barrel domain LCU_RS02805 PF00268 Ribonucleotide reductase, small chain LCU_RS02815 PF00005 ABC transporter LCU_RS02815 PF13732 Domain of unknown function (DUF4162) LCU_RS02840 PF11188 Protein of unknown function (DUF2975) LCU_RS02845 PF13443 Cro/C1-type HTH DNA-binding domain LCU_RS02850 PF10437 Bacterial lipoate protein ligase C-terminus LCU_RS02850 PF03099 Biotin/lipoate A/B protein ligase family LCU_RS02860 PF00005 ABC transporter LCU_RS02865 PF07729 FCD domain LCU_RS02865 PF00392 Bacterial regulatory proteins, gntR family LCU_RS02880 PF08240 Alcohol dehydrogenase GroES-like domain LCU_RS02880 PF13823 Alcohol dehydrogenase GroES-associated LCU_RS02880 PF00107 Zinc-binding dehydrogenase LCU_RS02885 PF00589 Phage integrase family LCU_RS02905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCU_RS02905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LCU_RS02910 PF02926 THUMP domain LCU_RS02910 PF01170 Putative RNA methylase family UPF0020 LCU_RS02920 PF05103 DivIVA protein LCU_RS02925 PF06908 YspA SLOG family LCU_RS02930 PF03838 Recombination protein U LCU_RS02935 PF00905 Penicillin binding protein transpeptidase domain LCU_RS02935 PF00912 Transglycosylase LCU_RS02940 PF00633 Helix-hairpin-helix motif LCU_RS02940 PF00730 HhH-GPD superfamily base excision DNA repair protein LCU_RS02940 PF10576 Iron-sulfur binding domain of endonuclease III LCU_RS02950 PF00152 tRNA synthetases class II (D, K and N) LCU_RS02950 PF01336 OB-fold nucleic acid binding domain LCU_RS02960 PF13307 Helicase C-terminal domain LCU_RS02960 PF04851 Type III restriction enzyme, res subunit LCU_RS02960 PF00929 Exonuclease LCU_RS02965 PF00580 UvrD/REP helicase N-terminal domain LCU_RS02965 PF13361 UvrD-like helicase C-terminal domain LCU_RS02970 PF12705 PD-(D/E)XK nuclease superfamily LCU_RS02975 PF10509 Galactokinase galactose-binding signature LCU_RS02975 PF08544 GHMP kinases C terminal LCU_RS02975 PF00288 GHMP kinases N terminal domain LCU_RS02985 PF00288 GHMP kinases N terminal domain LCU_RS02985 PF08544 GHMP kinases C terminal LCU_RS02990 PF01070 FMN-dependent dehydrogenase LCU_RS02995 PF00107 Zinc-binding dehydrogenase LCU_RS02995 PF08240 Alcohol dehydrogenase GroES-like domain LCU_RS03000 PF01638 HxlR-like helix-turn-helix LCU_RS03005 PF01381 Helix-turn-helix LCU_RS03025 PF01883 Iron-sulfur cluster assembly protein LCU_RS03035 PF01361 Tautomerase enzyme LCU_RS03040 PF03577 Peptidase family C69 LCU_RS03060 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LCU_RS03060 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LCU_RS03065 PF01202 Shikimate kinase LCU_RS03070 PF01761 3-dehydroquinate synthase LCU_RS03075 PF18152 DAHP synthase ferredoxin-like domain LCU_RS03075 PF00793 DAHP synthetase I family LCU_RS03080 PF08501 Shikimate dehydrogenase substrate binding domain LCU_RS03080 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LCU_RS03090 PF04963 Sigma-54 factor, core binding domain LCU_RS03090 PF04552 Sigma-54, DNA binding domain LCU_RS03090 PF00309 Sigma-54 factor, Activator interacting domain (AID) LCU_RS03105 PF01487 Type I 3-dehydroquinase LCU_RS03110 PF07687 Peptidase dimerisation domain LCU_RS03110 PF01546 Peptidase family M20/M25/M40 LCU_RS03115 PF01784 NIF3 (NGG1p interacting factor 3) LCU_RS03120 PF04816 tRNA (adenine(22)-N(1))-methyltransferase LCU_RS03135 PF00140 Sigma-70 factor, region 1.2 LCU_RS03135 PF04542 Sigma-70 region 2 LCU_RS03135 PF04545 Sigma-70, region 4 LCU_RS03135 PF04539 Sigma-70 region 3 LCU_RS03135 PF03979 Sigma-70 factor, region 1.1 LCU_RS03140 PF01807 CHC2 zinc finger LCU_RS03140 PF08275 DNA primase catalytic core, N-terminal domain LCU_RS03140 PF10410 DnaB-helicase binding domain of primase LCU_RS03145 PF04343 Protein of unknown function, DUF488 LCU_RS03150 PF02092 Glycyl-tRNA synthetase beta subunit LCU_RS03155 PF02091 Glycyl-tRNA synthetase alpha subunit LCU_RS03160 PF02565 Recombination protein O C terminal LCU_RS03160 PF11967 Recombination protein O N terminal LCU_RS03165 PF01926 50S ribosome-binding GTPase LCU_RS03165 PF07650 KH domain LCU_RS03175 PF02130 Uncharacterized protein family UPF0054 LCU_RS03180 PF02562 PhoH-like protein LCU_RS03185 PF09424 Yqey-like protein LCU_RS03190 PF01165 Ribosomal protein S21 LCU_RS03195 PF03618 Kinase/pyrophosphorylase LCU_RS03210 PF01261 Xylose isomerase-like TIM barrel LCU_RS03215 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LCU_RS03215 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LCU_RS03220 PF01625 Peptide methionine sulfoxide reductase LCU_RS03225 PF01641 SelR domain LCU_RS03230 PF13393 Histidyl-tRNA synthetase LCU_RS03230 PF03129 Anticodon binding domain LCU_RS03235 PF08239 Bacterial SH3 domain LCU_RS03235 PF01520 N-acetylmuramoyl-L-alanine amidase LCU_RS03245 PF13396 Phospholipase_D-nuclease N-terminal LCU_RS03245 PF13091 PLD-like domain LCU_RS03250 PF00497 Bacterial extracellular solute-binding proteins, family 3 LCU_RS03255 PF00005 ABC transporter LCU_RS03260 PF00528 Binding-protein-dependent transport system inner membrane component LCU_RS03265 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LCU_RS03270 PF03775 Septum formation inhibitor MinC, C-terminal domain LCU_RS03280 PF04085 rod shape-determining protein MreC LCU_RS03290 PF04002 RadC-like JAB domain LCU_RS03295 PF13419 Haloacid dehalogenase-like hydrolase LCU_RS03300 PF02875 Mur ligase family, glutamate ligase domain LCU_RS03300 PF08245 Mur ligase middle domain LCU_RS03305 PF10458 Valyl tRNA synthetase tRNA binding arm LCU_RS03305 PF00133 tRNA synthetases class I (I, L, M and V) LCU_RS03305 PF08264 Anticodon-binding domain of tRNA LCU_RS03310 PF02568 Thiamine biosynthesis protein (ThiI) LCU_RS03310 PF02926 THUMP domain LCU_RS03315 PF00266 Aminotransferase class-V LCU_RS03320 PF06160 Septation ring formation regulator, EzrA LCU_RS03325 PF00163 Ribosomal protein S4/S9 N-terminal domain LCU_RS03325 PF01479 S4 domain LCU_RS03330 PF06335 Protein of unknown function (DUF1054) LCU_RS03340 PF02655 ATP-grasp domain LCU_RS03340 PF18419 ATP-grasp-like domain LCU_RS03340 PF04262 Glutamate-cysteine ligase LCU_RS03345 PF16193 AAA C-terminal domain LCU_RS03345 PF12002 MgsA AAA+ ATPase C terminal LCU_RS03345 PF05496 Holliday junction DNA helicase RuvB P-loop domain LCU_RS03355 PF00582 Universal stress protein family LCU_RS03365 PF00665 Integrase core domain LCU_RS03365 PF13936 Helix-turn-helix domain LCU_RS03370 PF13419 Haloacid dehalogenase-like hydrolase LCU_RS03380 PF06486 Protein of unknown function (DUF1093) LCU_RS03395 PF01156 Inosine-uridine preferring nucleoside hydrolase LCU_RS03405 PF13185 GAF domain LCU_RS03410 PF01923 Cobalamin adenosyltransferase LCU_RS03435 PF13333 Integrase core domain LCU_RS03435 PF00665 Integrase core domain LCU_RS03435 PF13276 HTH-like domain LCU_RS03440 PF13936 Helix-turn-helix domain LCU_RS03440 PF00665 Integrase core domain LCU_RS03450 PF01458 Uncharacterized protein family (UPF0051) LCU_RS03455 PF01592 NifU-like N terminal domain LCU_RS03460 PF00266 Aminotransferase class-V LCU_RS03465 PF01458 Uncharacterized protein family (UPF0051) LCU_RS03470 PF00005 ABC transporter LCU_RS03485 PF09827 CRISPR associated protein Cas2 LCU_RS03500 PF01867 CRISPR associated protein Cas1 LCU_RS03505 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 LCU_RS03505 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 LCU_RS03505 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 LCU_RS03505 PF13395 HNH endonuclease LCU_RS03510 PF03180 NLPA lipoprotein LCU_RS03515 PF00528 Binding-protein-dependent transport system inner membrane component LCU_RS03520 PF00005 ABC transporter LCU_RS03520 PF09383 NIL domain LCU_RS03525 PF01597 Glycine cleavage H-protein LCU_RS03530 PF01098 Cell cycle protein LCU_RS03540 PF01809 Putative membrane protein insertion efficiency factor LCU_RS03555 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LCU_RS03565 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LCU_RS03565 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LCU_RS03570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LCU_RS03570 PF02874 ATP synthase alpha/beta family, beta-barrel domain LCU_RS03575 PF00231 ATP synthase LCU_RS03580 PF00306 ATP synthase alpha/beta chain, C terminal domain LCU_RS03580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LCU_RS03580 PF02874 ATP synthase alpha/beta family, beta-barrel domain LCU_RS03585 PF00213 ATP synthase delta (OSCP) subunit LCU_RS03590 PF00430 ATP synthase B/B' CF(0) LCU_RS03595 PF00137 ATP synthase subunit C LCU_RS03600 PF00119 ATP synthase A chain LCU_RS03610 PF00464 Serine hydroxymethyltransferase LCU_RS03615 PF01300 Telomere recombination LCU_RS03615 PF03481 Putative GTP-binding controlling metal-binding LCU_RS03620 PF05175 Methyltransferase small domain LCU_RS03620 PF17827 PrmC N-terminal domain LCU_RS03625 PF00472 RF-1 domain LCU_RS03625 PF03462 PCRF domain LCU_RS03630 PF00265 Thymidine kinase LCU_RS03635 PF08353 Domain of unknown function (DUF1727) LCU_RS03635 PF08245 Mur ligase middle domain LCU_RS03640 PF07685 CobB/CobQ-like glutamine amidotransferase domain LCU_RS03650 PF01966 HD domain LCU_RS03655 PF01238 Phosphomannose isomerase type I LCU_RS03660 PF00144 Beta-lactamase LCU_RS03665 PF00005 ABC transporter LCU_RS03665 PF00664 ABC transporter transmembrane region LCU_RS03670 PF00664 ABC transporter transmembrane region LCU_RS03670 PF00005 ABC transporter LCU_RS03685 PF12704 MacB-like periplasmic core domain LCU_RS03685 PF00005 ABC transporter LCU_RS03685 PF02687 FtsX-like permease family LCU_RS03690 PF02687 FtsX-like permease family LCU_RS03715 PF02142 MGS-like domain LCU_RS03725 PF01476 LysM domain LCU_RS03725 PF05257 CHAP domain LCU_RS03820 PF02368 Bacterial Ig-like domain (group 2) LCU_RS03890 PF00145 C-5 cytosine-specific DNA methylase LCU_RS03945 PF02151 UvrB/uvrC motif LCU_RS03945 PF12344 Ultra-violet resistance protein B LCU_RS03945 PF04851 Type III restriction enzyme, res subunit LCU_RS03945 PF00271 Helicase conserved C-terminal domain LCU_RS03945 PF17757 UvrB interaction domain LCU_RS03975 PF01381 Helix-turn-helix LCU_RS03990 PF00589 Phage integrase family LCU_RS03990 PF02899 Phage integrase, N-terminal SAM-like domain LCU_RS04015 PF11799 impB/mucB/samB family C-terminal domain LCU_RS04015 PF11798 IMS family HHH motif LCU_RS04015 PF00817 impB/mucB/samB family LCU_RS04030 PF02705 K+ potassium transporter LCU_RS04040 PF00232 Glycosyl hydrolase family 1 LCU_RS04045 PF00230 Major intrinsic protein LCU_RS04060 PF00582 Universal stress protein family LCU_RS04070 PF13529 Peptidase_C39 like family LCU_RS04095 PF00342 Phosphoglucose isomerase LCU_RS04105 PF02653 Branched-chain amino acid transport system / permease component LCU_RS04110 PF00005 ABC transporter LCU_RS04115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LCU_RS04115 PF00205 Thiamine pyrophosphate enzyme, central domain LCU_RS04115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LCU_RS04125 PF00106 short chain dehydrogenase LCU_RS04130 PF01638 HxlR-like helix-turn-helix LCU_RS04145 PF09278 MerR, DNA binding LCU_RS04145 PF00376 MerR family regulatory protein LCU_RS04170 PF04794 YdjC-like protein LCU_RS04175 PF02378 Phosphotransferase system, EIIC LCU_RS04175 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LCU_RS04175 PF00367 phosphotransferase system, EIIB LCU_RS04180 PF00128 Alpha amylase, catalytic domain LCU_RS04180 PF16657 Maltogenic Amylase, C-terminal domain LCU_RS04190 PF00392 Bacterial regulatory proteins, gntR family LCU_RS04190 PF07702 UTRA domain LCU_RS04200 PF07690 Major Facilitator Superfamily LCU_RS04205 PF09586 Bacterial membrane protein YfhO LCU_RS04210 PF06800 Sugar transport protein LCU_RS04220 PF13439 Glycosyltransferase Family 4 LCU_RS04220 PF00534 Glycosyl transferases group 1 LCU_RS04225 PF00884 Sulfatase LCU_RS04245 PF07969 Amidohydrolase family LCU_RS04250 PF00672 HAMP domain LCU_RS04250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCU_RS04250 PF00512 His Kinase A (phospho-acceptor) domain LCU_RS04255 PF00072 Response regulator receiver domain LCU_RS04255 PF00486 Transcriptional regulatory protein, C terminal LCU_RS04265 PF13520 Amino acid permease LCU_RS04275 PF00684 DnaJ central domain LCU_RS04275 PF00226 DnaJ domain LCU_RS04275 PF01556 DnaJ C terminal domain LCU_RS04280 PF00012 Hsp70 protein LCU_RS04285 PF01025 GrpE LCU_RS04290 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LCU_RS04290 PF01628 HrcA protein C terminal domain LCU_RS04295 PF04055 Radical SAM superfamily LCU_RS04295 PF06969 HemN C-terminal domain LCU_RS04300 PF06574 FAD synthetase LCU_RS04300 PF01687 Riboflavin kinase LCU_RS04305 PF16198 tRNA pseudouridylate synthase B C-terminal domain LCU_RS04305 PF01509 TruB family pseudouridylate synthase (N terminal domain) LCU_RS04320 PF02033 Ribosome-binding factor A LCU_RS04325 PF04760 Translation initiation factor IF-2, N-terminal region LCU_RS04325 PF11987 Translation-initiation factor 2 LCU_RS04325 PF00009 Elongation factor Tu GTP binding domain LCU_RS04335 PF04296 Protein of unknown function (DUF448) LCU_RS04340 PF00575 S1 RNA binding domain LCU_RS04340 PF08529 NusA N-terminal domain LCU_RS04340 PF13184 NusA-like KH domain LCU_RS04345 PF02576 RimP N-terminal domain LCU_RS04345 PF17384 RimP C-terminal SH3 domain LCU_RS04350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LCU_RS04350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LCU_RS04385 PF00589 Phage integrase family LCU_RS04385 PF02899 Phage integrase, N-terminal SAM-like domain LCU_RS04420 PF00929 Exonuclease LCU_RS04420 PF02811 PHP domain LCU_RS04420 PF14579 Helix-hairpin-helix motif LCU_RS04420 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LCU_RS04420 PF14480 DNA polymerase III polC-type N-terminus I LCU_RS04420 PF11490 DNA polymerase III polC-type N-terminus II LCU_RS04420 PF07733 Bacterial DNA polymerase III alpha NTPase domain LCU_RS04425 PF03129 Anticodon binding domain LCU_RS04425 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LCU_RS04425 PF04073 Aminoacyl-tRNA editing domain LCU_RS04430 PF17820 PDZ domain LCU_RS04430 PF02163 Peptidase family M50 LCU_RS04440 PF01255 Putative undecaprenyl diphosphate synthase LCU_RS04445 PF01061 ABC-2 type transporter LCU_RS04450 PF01765 Ribosome recycling factor LCU_RS04455 PF00696 Amino acid kinase family LCU_RS04460 PF00889 Elongation factor TS LCU_RS04465 PF00318 Ribosomal protein S2 LCU_RS04470 PF13302 Acetyltransferase (GNAT) domain LCU_RS04475 PF01541 GIY-YIG catalytic domain LCU_RS04480 PF05175 Methyltransferase small domain LCU_RS04485 PF01553 Acyltransferase LCU_RS04495 PF12146 Serine aminopeptidase, S33 LCU_RS04500 PF00664 ABC transporter transmembrane region LCU_RS04500 PF00005 ABC transporter LCU_RS04505 PF00664 ABC transporter transmembrane region LCU_RS04505 PF00005 ABC transporter LCU_RS04510 PF03672 Uncharacterised protein family (UPF0154) LCU_RS04515 PF05979 Bacterial protein of unknown function (DUF896) LCU_RS04520 PF00717 Peptidase S24-like LCU_RS04520 PF01726 LexA DNA binding domain LCU_RS04525 PF00156 Phosphoribosyl transferase domain LCU_RS04530 PF17768 RecJ OB domain LCU_RS04530 PF02272 DHHA1 domain LCU_RS04530 PF01368 DHH family LCU_RS04530 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LCU_RS04535 PF16363 GDP-mannose 4,6 dehydratase LCU_RS04540 PF06993 Protein of unknown function (DUF1304) LCU_RS04545 PF01906 Putative heavy-metal-binding LCU_RS04595 PF10668 Phage terminase small subunit LCU_RS04620 PF02899 Phage integrase, N-terminal SAM-like domain LCU_RS04620 PF00589 Phage integrase family LCU_RS04625 PF06421 GTP-binding protein LepA C-terminus LCU_RS04625 PF00679 Elongation factor G C-terminus LCU_RS04625 PF00009 Elongation factor Tu GTP binding domain LCU_RS04625 PF03144 Elongation factor Tu domain 2 LCU_RS04650 PF05656 Protein of unknown function (DUF805) LCU_RS04665 PF00871 Acetokinase family LCU_RS04670 PF02384 N-6 DNA Methylase LCU_RS04690 PF07963 Prokaryotic N-terminal methylation motif LCU_RS04695 PF00482 Type II secretion system (T2SS), protein F LCU_RS04700 PF00437 Type II/IV secretion system protein LCU_RS04705 PF01709 Transcriptional regulator LCU_RS04735 PF03601 Conserved hypothetical protein 698 LCU_RS04740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCU_RS04740 PF03466 LysR substrate binding domain LCU_RS04745 PF01554 MatE LCU_RS04755 PF00849 RNA pseudouridylate synthase LCU_RS04760 PF03358 NADPH-dependent FMN reductase LCU_RS04765 PF02525 Flavodoxin-like fold LCU_RS04770 PF00120 Glutamine synthetase, catalytic domain LCU_RS04770 PF03951 Glutamine synthetase, beta-Grasp domain LCU_RS04775 PF13411 MerR HTH family regulatory protein LCU_RS04780 PF00958 GMP synthase C terminal domain LCU_RS04780 PF03352 Methyladenine glycosylase LCU_RS04780 PF00117 Glutamine amidotransferase class-I LCU_RS04780 PF13673 Acetyltransferase (GNAT) domain LCU_RS04780 PF13302 Acetyltransferase (GNAT) domain LCU_RS04785 PF01381 Helix-turn-helix LCU_RS04790 PF06838 Methionine gamma-lyase LCU_RS04810 PF00480 ROK family LCU_RS04825 PF01812 5-formyltetrahydrofolate cyclo-ligase family LCU_RS04830 PF00471 Ribosomal protein L33 LCU_RS04835 PF00905 Penicillin binding protein transpeptidase domain LCU_RS04835 PF03717 Penicillin-binding Protein dimerisation domain LCU_RS04840 PF09586 Bacterial membrane protein YfhO LCU_RS04845 PF00999 Sodium/hydrogen exchanger family LCU_RS04850 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LCU_RS04850 PF01565 FAD binding domain LCU_RS04855 PF03372 Endonuclease/Exonuclease/phosphatase family LCU_RS04860 PF14579 Helix-hairpin-helix motif LCU_RS04860 PF11490 DNA polymerase III polC-type N-terminus II LCU_RS04860 PF07733 Bacterial DNA polymerase III alpha NTPase domain LCU_RS04860 PF14480 DNA polymerase III polC-type N-terminus I LCU_RS04860 PF00929 Exonuclease LCU_RS04860 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LCU_RS04860 PF02811 PHP domain LCU_RS04865 PF00892 EamA-like transporter family LCU_RS04875 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LCU_RS04880 PF01515 Phosphate acetyl/butaryl transferase LCU_RS04885 PF03167 Uracil DNA glycosylase superfamily LCU_RS04915 PF00392 Bacterial regulatory proteins, gntR family LCU_RS04915 PF00155 Aminotransferase class I and II LCU_RS04920 PF02581 Thiamine monophosphate synthase LCU_RS04920 PF08543 Phosphomethylpyrimidine kinase LCU_RS04925 PF07155 ECF-type riboflavin transporter, S component LCU_RS04930 PF04260 Protein of unknown function (DUF436) LCU_RS04935 PF01380 SIS domain LCU_RS04945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LCU_RS04945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LCU_RS04945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LCU_RS04945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LCU_RS04955 PF02457 DisA bacterial checkpoint controller nucleotide-binding LCU_RS04965 PF00528 Binding-protein-dependent transport system inner membrane component LCU_RS04970 PF00528 Binding-protein-dependent transport system inner membrane component LCU_RS04975 PF08402 TOBE domain LCU_RS04975 PF00005 ABC transporter LCU_RS04980 PF00107 Zinc-binding dehydrogenase LCU_RS04980 PF08240 Alcohol dehydrogenase GroES-like domain LCU_RS04990 PF00196 Bacterial regulatory proteins, luxR family LCU_RS04990 PF00072 Response regulator receiver domain LCU_RS04995 PF07730 Histidine kinase LCU_RS04995 PF00672 HAMP domain LCU_RS04995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCU_RS05005 PF03449 Transcription elongation factor, N-terminal LCU_RS05005 PF01272 Transcription elongation factor, GreA/GreB, C-term LCU_RS05010 PF00485 Phosphoribulokinase / Uridine kinase family LCU_RS05015 PF02618 YceG-like family LCU_RS05020 PF03483 B3/4 domain LCU_RS05020 PF03147 Ferredoxin-fold anticodon binding domain LCU_RS05020 PF01588 Putative tRNA binding domain LCU_RS05020 PF03484 tRNA synthetase B5 domain LCU_RS05020 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LCU_RS05025 PF01409 tRNA synthetases class II core domain (F) LCU_RS05025 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LCU_RS05030 PF01638 HxlR-like helix-turn-helix LCU_RS05040 PF00588 SpoU rRNA Methylase family LCU_RS05040 PF08032 RNA 2'-O ribose methyltransferase substrate binding LCU_RS05045 PF00708 Acylphosphatase LCU_RS05050 PF02096 60Kd inner membrane protein LCU_RS05055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCU_RS05055 PF18719 ArlS sensor domain LCU_RS05055 PF00512 His Kinase A (phospho-acceptor) domain LCU_RS05060 PF00072 Response regulator receiver domain LCU_RS05060 PF00486 Transcriptional regulatory protein, C terminal LCU_RS05065 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LCU_RS05065 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LCU_RS05075 PF05636 HIGH Nucleotidyl Transferase LCU_RS05080 PF13649 Methyltransferase domain LCU_RS05090 PF01966 HD domain LCU_RS05095 PF01467 Cytidylyltransferase-like LCU_RS05105 PF01926 50S ribosome-binding GTPase LCU_RS05115 PF00107 Zinc-binding dehydrogenase LCU_RS05115 PF08240 Alcohol dehydrogenase GroES-like domain LCU_RS05120 PF00453 Ribosomal protein L20 LCU_RS05125 PF01632 Ribosomal protein L35 LCU_RS05130 PF05198 Translation initiation factor IF-3, N-terminal domain LCU_RS05130 PF00707 Translation initiation factor IF-3, C-terminal domain LCU_RS05135 PF01070 FMN-dependent dehydrogenase LCU_RS05140 PF03129 Anticodon binding domain LCU_RS05140 PF02824 TGS domain LCU_RS05140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LCU_RS05145 PF01695 IstB-like ATP binding protein LCU_RS05145 PF07319 Primosomal protein DnaI N-terminus LCU_RS05150 PF07261 Replication initiation and membrane attachment LCU_RS05155 PF03477 ATP cone domain LCU_RS05160 PF01121 Dephospho-CoA kinase LCU_RS05165 PF06827 Zinc finger found in FPG and IleRS LCU_RS05165 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LCU_RS05165 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LCU_RS05170 PF00476 DNA polymerase family A LCU_RS05170 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LCU_RS05170 PF01367 5'-3' exonuclease, C-terminal SAM fold LCU_RS05180 PF03990 G5-linked-Ubiquitin-like domain LCU_RS05180 PF07501 G5 domain LCU_RS05180 PF06725 3D domain LCU_RS05185 PF01668 SmpB protein LCU_RS05190 PF00575 S1 RNA binding domain LCU_RS05190 PF17876 Cold shock domain LCU_RS05190 PF00773 RNB domain LCU_RS05190 PF08206 Ribonuclease B OB domain LCU_RS05200 PF03840 Preprotein translocase SecG subunit LCU_RS05205 PF00654 Voltage gated chloride channel LCU_RS05215 PF00326 Prolyl oligopeptidase family LCU_RS05220 PF03485 Arginyl tRNA synthetase N terminal domain LCU_RS05220 PF05746 DALR anticodon binding domain LCU_RS05220 PF00750 tRNA synthetases class I (R) LCU_RS05225 PF12704 MacB-like periplasmic core domain LCU_RS05225 PF02687 FtsX-like permease family LCU_RS05225 PF00005 ABC transporter LCU_RS05240 PF13520 Amino acid permease LCU_RS05270 PF01256 Carbohydrate kinase LCU_RS05275 PF01479 S4 domain LCU_RS05275 PF00849 RNA pseudouridylate synthase LCU_RS05280 PF14667 Polysaccharide biosynthesis C-terminal domain LCU_RS05280 PF01943 Polysaccharide biosynthesis protein LCU_RS05290 PF01638 HxlR-like helix-turn-helix LCU_RS05295 PF00324 Amino acid permease LCU_RS05300 PF13603 Leucyl-tRNA synthetase, Domain 2 LCU_RS05300 PF09334 tRNA synthetases class I (M) LCU_RS05300 PF00133 tRNA synthetases class I (I, L, M and V) LCU_RS05300 PF08264 Anticodon-binding domain of tRNA LCU_RS05305 PF01476 LysM domain LCU_RS05305 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LCU_RS05310 PF01569 PAP2 superfamily LCU_RS05315 PF06962 Putative rRNA methylase LCU_RS05320 PF03932 CutC family LCU_RS05325 PF02673 Bacitracin resistance protein BacA LCU_RS05330 PF01479 S4 domain LCU_RS05330 PF00849 RNA pseudouridylate synthase LCU_RS05335 PF01513 ATP-NAD kinase LCU_RS05340 PF04607 Region found in RelA / SpoT proteins LCU_RS05360 PF05389 Negative regulator of genetic competence (MecA) LCU_RS05365 PF03960 ArsC family LCU_RS05370 PF12706 Beta-lactamase superfamily domain LCU_RS05380 PF02687 FtsX-like permease family LCU_RS05385 PF00005 ABC transporter LCU_RS05390 PF00486 Transcriptional regulatory protein, C terminal LCU_RS05390 PF00072 Response regulator receiver domain LCU_RS05395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCU_RS05415 PF03477 ATP cone domain LCU_RS05415 PF13597 Anaerobic ribonucleoside-triphosphate reductase LCU_RS05425 PF03965 Penicillinase repressor LCU_RS05430 PF02896 PEP-utilising enzyme, TIM barrel domain LCU_RS05430 PF00391 PEP-utilising enzyme, mobile domain LCU_RS05430 PF05524 PEP-utilising enzyme, N-terminal LCU_RS05435 PF00381 PTS HPr component phosphorylation site LCU_RS05445 PF00004 ATPase family associated with various cellular activities (AAA) LCU_RS05445 PF17871 AAA lid domain LCU_RS05445 PF10431 C-terminal, D2-small domain, of ClpB protein LCU_RS05445 PF07724 AAA domain (Cdc48 subfamily) LCU_RS05465 PF16658 Class II release factor RF3, C-terminal domain LCU_RS05465 PF03144 Elongation factor Tu domain 2 LCU_RS05465 PF00009 Elongation factor Tu GTP binding domain LCU_RS05470 PF01595 Cyclin M transmembrane N-terminal domain LCU_RS05470 PF03471 Transporter associated domain LCU_RS05470 PF00571 CBS domain LCU_RS05475 PF01594 AI-2E family transporter LCU_RS05480 PF13673 Acetyltransferase (GNAT) domain LCU_RS05490 PF04167 Protein of unknown function (DUF402) LCU_RS05495 PF00730 HhH-GPD superfamily base excision DNA repair protein LCU_RS05495 PF14815 NUDIX domain LCU_RS05500 PF02631 RecX family LCU_RS05510 PF01938 TRAM domain LCU_RS05510 PF05958 tRNA (Uracil-5-)-methyltransferase LCU_RS05530 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal LCU_RS05530 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal LCU_RS05535 PF00368 Hydroxymethylglutaryl-coenzyme A reductase LCU_RS05540 PF02803 Thiolase, C-terminal domain LCU_RS05540 PF00108 Thiolase, N-terminal domain LCU_RS05570 PF00005 ABC transporter LCU_RS05575 PF00528 Binding-protein-dependent transport system inner membrane component LCU_RS05580 PF01327 Polypeptide deformylase LCU_RS05585 PF00483 Nucleotidyl transferase LCU_RS05600 PF04321 RmlD substrate binding domain LCU_RS05605 PF16363 GDP-mannose 4,6 dehydratase LCU_RS05610 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LCU_RS05615 PF00483 Nucleotidyl transferase LCU_RS05625 PF00535 Glycosyl transferase family 2 LCU_RS05645 PF13439 Glycosyltransferase Family 4 LCU_RS05645 PF00534 Glycosyl transferases group 1 LCU_RS05655 PF02397 Bacterial sugar transferase LCU_RS05660 PF13614 AAA domain LCU_RS05665 PF02706 Chain length determinant protein LCU_RS05670 PF03816 Cell envelope-related transcriptional attenuator domain LCU_RS05675 PF03631 Virulence factor BrkB LCU_RS05680 PF00557 Metallopeptidase family M24 LCU_RS05685 PF00258 Flavodoxin LCU_RS05695 PF04138 GtrA-like protein LCU_RS05700 PF00535 Glycosyl transferase family 2 LCU_RS05705 PF02350 UDP-N-acetylglucosamine 2-epimerase LCU_RS05715 PF02073 Thermophilic metalloprotease (M29) LCU_RS05730 PF00893 Small Multidrug Resistance protein LCU_RS05740 PF01116 Fructose-bisphosphate aldolase class-II LCU_RS05750 PF07690 Major Facilitator Superfamily LCU_RS05755 PF08279 HTH domain LCU_RS05755 PF02829 3H domain LCU_RS05760 PF00232 Glycosyl hydrolase family 1 LCU_RS05770 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LCU_RS05775 PF00270 DEAD/DEAH box helicase LCU_RS05775 PF00271 Helicase conserved C-terminal domain LCU_RS05780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LCU_RS05795 PF08239 Bacterial SH3 domain LCU_RS05795 PF01183 Glycosyl hydrolases family 25 LCU_RS05805 PF01145 SPFH domain / Band 7 family LCU_RS05815 PF02378 Phosphotransferase system, EIIC LCU_RS05820 PF05958 tRNA (Uracil-5-)-methyltransferase LCU_RS05820 PF01938 TRAM domain LCU_RS05825 PF00781 Diacylglycerol kinase catalytic domain LCU_RS05830 PF02637 GatB domain LCU_RS05830 PF02934 GatB/GatE catalytic domain LCU_RS05835 PF01425 Amidase LCU_RS05840 PF02686 Glu-tRNAGln amidotransferase C subunit LCU_RS05850 PF02082 Transcriptional regulator LCU_RS05865 PF07537 CamS sex pheromone cAM373 precursor LCU_RS05870 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LCU_RS05870 PF12826 Helix-hairpin-helix motif LCU_RS05870 PF01653 NAD-dependent DNA ligase adenylation domain LCU_RS05870 PF03120 NAD-dependent DNA ligase OB-fold domain LCU_RS05870 PF00533 BRCA1 C Terminus (BRCT) domain LCU_RS05875 PF00580 UvrD/REP helicase N-terminal domain LCU_RS05875 PF13361 UvrD-like helicase C-terminal domain LCU_RS05885 PF00356 Bacterial regulatory proteins, lacI family LCU_RS05890 PF10397 Adenylosuccinate lyase C-terminus LCU_RS05890 PF00206 Lyase LCU_RS05895 PF02222 ATP-grasp domain LCU_RS05895 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LCU_RS05905 PF13457 GW (Gly-Tryp) dipeptide domain LCU_RS05905 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LCU_RS05910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LCU_RS05910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LCU_RS05920 PF00313 'Cold-shock' DNA-binding domain LCU_RS05945 PF10263 SprT-like family LCU_RS05950 PF00575 S1 RNA binding domain LCU_RS05950 PF17674 HHH domain LCU_RS05950 PF16921 Tex protein YqgF-like domain LCU_RS05950 PF09371 Tex-like protein N-terminal domain LCU_RS05960 PF00689 Cation transporting ATPase, C-terminus LCU_RS05960 PF00690 Cation transporter/ATPase, N-terminus LCU_RS05965 PF02540 NAD synthase LCU_RS05970 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LCU_RS05970 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LCU_RS05970 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain LCU_RS05980 PF00535 Glycosyl transferase family 2 LCU_RS05990 PF03808 Glycosyl transferase WecB/TagA/CpsF family LCU_RS06000 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LCU_RS06005 PF01467 Cytidylyltransferase-like LCU_RS06050 PF00392 Bacterial regulatory proteins, gntR family LCU_RS06050 PF07702 UTRA domain LCU_RS06055 PF01979 Amidohydrolase family LCU_RS06060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LCU_RS06065 PF14748 Pyrroline-5-carboxylate reductase dimerisation LCU_RS06065 PF03807 NADP oxidoreductase coenzyme F420-dependent LCU_RS06080 PF00854 POT family LCU_RS06120 PF01336 OB-fold nucleic acid binding domain LCU_RS06120 PF00152 tRNA synthetases class II (D, K and N) LCU_RS06125 PF01207 Dihydrouridine synthase (Dus) LCU_RS06130 PF01430 Hsp33 protein LCU_RS06135 PF01434 Peptidase family M41 LCU_RS06135 PF06480 FtsH Extracellular LCU_RS06135 PF17862 AAA+ lid domain LCU_RS06135 PF00004 ATPase family associated with various cellular activities (AAA) LCU_RS06140 PF00156 Phosphoribosyl transferase domain LCU_RS06145 PF11734 TilS substrate C-terminal domain LCU_RS06145 PF01171 PP-loop family LCU_RS06150 PF00575 S1 RNA binding domain LCU_RS06160 PF01479 S4 domain LCU_RS06165 PF01943 Polysaccharide biosynthesis protein LCU_RS06165 PF14667 Polysaccharide biosynthesis C-terminal domain LCU_RS06170 PF02559 CarD-like/TRCF domain LCU_RS06170 PF00271 Helicase conserved C-terminal domain LCU_RS06170 PF03461 TRCF domain LCU_RS06170 PF17757 UvrB interaction domain LCU_RS06170 PF00270 DEAD/DEAH box helicase LCU_RS06175 PF01195 Peptidyl-tRNA hydrolase LCU_RS06180 PF00056 lactate/malate dehydrogenase, NAD binding domain LCU_RS06180 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LCU_RS06195 PF06177 QueT transporter LCU_RS06200 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LCU_RS06210 PF00842 Alanine racemase, C-terminal domain LCU_RS06210 PF01168 Alanine racemase, N-terminal domain LCU_RS06215 PF01648 4'-phosphopantetheinyl transferase superfamily LCU_RS06220 PF00270 DEAD/DEAH box helicase LCU_RS06220 PF00271 Helicase conserved C-terminal domain LCU_RS06225 PF08245 Mur ligase middle domain LCU_RS06225 PF02875 Mur ligase family, glutamate ligase domain LCU_RS06225 PF01225 Mur ligase family, catalytic domain LCU_RS06235 PF01435 Peptidase family M48 LCU_RS06240 PF04011 LemA family LCU_RS06250 PF07690 Major Facilitator Superfamily LCU_RS06260 PF06736 Protein of unknown function (DUF1211) LCU_RS06265 PF00654 Voltage gated chloride channel LCU_RS06270 PF01197 Ribosomal protein L31 LCU_RS06275 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LCU_RS06280 PF00117 Glutamine amidotransferase class-I LCU_RS06280 PF06418 CTP synthase N-terminus LCU_RS06285 PF00480 ROK family LCU_RS06290 PF05066 HB1, ASXL, restriction endonuclease HTH domain LCU_RS06300 PF03099 Biotin/lipoate A/B protein ligase family LCU_RS06305 PF01966 HD domain LCU_RS06320 PF03741 Integral membrane protein TerC family LCU_RS06325 PF01741 Large-conductance mechanosensitive channel, MscL LCU_RS06330 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LCU_RS06330 PF14572 Phosphoribosyl synthetase-associated domain LCU_RS06340 PF00132 Bacterial transferase hexapeptide (six repeats) LCU_RS06340 PF00483 Nucleotidyl transferase LCU_RS06360 PF13936 Helix-turn-helix domain LCU_RS06360 PF00665 Integrase core domain LCU_RS06365 PF03610 PTS system fructose IIA component LCU_RS06370 PF02734 DAK2 domain LCU_RS06375 PF02733 Dak1 domain LCU_RS06380 PF00156 Phosphoribosyl transferase domain LCU_RS06380 PF09182 Bacterial purine repressor, N-terminal LCU_RS06385 PF00288 GHMP kinases N terminal domain LCU_RS06385 PF08544 GHMP kinases C terminal LCU_RS06390 PF01047 MarR family LCU_RS06400 PF06257 Biofilm formation stimulator VEG LCU_RS06405 PF00398 Ribosomal RNA adenine dimethylase LCU_RS06410 PF13331 Domain of unknown function (DUF4093) LCU_RS06415 PF01026 TatD related DNase LCU_RS06420 PF09334 tRNA synthetases class I (M) LCU_RS06420 PF01588 Putative tRNA binding domain LCU_RS06420 PF08264 Anticodon-binding domain of tRNA LCU_RS06425 PF01904 Protein of unknown function DUF72 LCU_RS06445 PF02146 Sir2 family LCU_RS06455 PF01872 RibD C-terminal domain LCU_RS06465 PF00248 Aldo/keto reductase family LCU_RS06475 PF01554 MatE LCU_RS06480 PF00579 tRNA synthetases class I (W and Y) LCU_RS06485 PF13538 UvrD-like helicase C-terminal domain LCU_RS06490 PF00814 Glycoprotease family LCU_RS06500 PF00814 Glycoprotease family LCU_RS06505 PF12822 ECF transporter, substrate-specific component LCU_RS06510 PF00710 Asparaginase, N-terminal LCU_RS06510 PF17763 Glutaminase/Asparaginase C-terminal domain LCU_RS06520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LCU_RS06525 PF06156 Initiation control protein YabA LCU_RS06530 PF09115 DNA polymerase III, delta subunit, C terminal LCU_RS06535 PF06153 Cyclic-di-AMP receptor LCU_RS06540 PF02223 Thymidylate kinase LCU_RS06550 PF13662 Toprim domain LCU_RS06550 PF02132 RecR protein LCU_RS06555 PF02575 YbaB/EbfC DNA-binding family LCU_RS06560 PF12169 DNA polymerase III subunits gamma and tau domain III LCU_RS06570 PF14437 MafB19-like deaminase LCU_RS06580 PF05175 Methyltransferase small domain LCU_RS06585 PF03706 Lysylphosphatidylglycerol synthase TM region LCU_RS06585 PF09924 Uncharacterised conserved protein (DUF2156) LCU_RS06590 PF00542 Ribosomal protein L7/L12 C-terminal domain LCU_RS06590 PF16320 Ribosomal protein L7/L12 dimerisation domain LCU_RS06595 PF00466 Ribosomal protein L10 LCU_RS06600 PF00871 Acetokinase family LCU_RS06605 PF00860 Permease family LCU_RS06610 PF13382 Adenine deaminase C-terminal domain LCU_RS06610 PF01979 Amidohydrolase family LCU_RS06615 PF00687 Ribosomal protein L1p/L10e family LCU_RS06620 PF00298 Ribosomal protein L11, RNA binding domain LCU_RS06620 PF03946 Ribosomal protein L11, N-terminal domain LCU_RS06630 PF00467 KOW motif LCU_RS06630 PF02357 Transcription termination factor nusG LCU_RS06640 PF00471 Ribosomal protein L33 LCU_RS06650 PF04205 FMN-binding domain LCU_RS06670 PF00348 Polyprenyl synthetase LCU_RS06700 PF00005 ABC transporter LCU_RS06705 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LCU_RS06705 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LCU_RS06720 PF03169 OPT oligopeptide transporter protein LCU_RS06725 PF03313 Serine dehydratase alpha chain LCU_RS06730 PF01842 ACT domain LCU_RS06730 PF03315 Serine dehydratase beta chain LCU_RS06735 PF13460 NAD(P)H-binding LCU_RS06750 PF00877 NlpC/P60 family LCU_RS06755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCU_RS06755 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCU_RS06760 PF00375 Sodium:dicarboxylate symporter family LCU_RS06765 PF00665 Integrase core domain LCU_RS06765 PF13936 Helix-turn-helix domain LCU_RS06785 PF07690 Major Facilitator Superfamily LCU_RS06790 PF00085 Thioredoxin LCU_RS06810 PF00005 ABC transporter LCU_RS06810 PF12848 ABC transporter LCU_RS06840 PF05870 Phenolic acid decarboxylase (PAD) LCU_RS06845 PF00999 Sodium/hydrogen exchanger family LCU_RS06850 PF00689 Cation transporting ATPase, C-terminus LCU_RS06850 PF00690 Cation transporter/ATPase, N-terminus LCU_RS06875 PF00005 ABC transporter LCU_RS06880 PF00881 Nitroreductase family LCU_RS06900 PF01022 Bacterial regulatory protein, arsR family LCU_RS06905 PF07702 UTRA domain LCU_RS06905 PF00392 Bacterial regulatory proteins, gntR family LCU_RS06910 PF00232 Glycosyl hydrolase family 1 LCU_RS06915 PF02378 Phosphotransferase system, EIIC LCU_RS06920 PF00781 Diacylglycerol kinase catalytic domain LCU_RS06925 PF00380 Ribosomal protein S9/S16 LCU_RS06930 PF00572 Ribosomal protein L13 LCU_RS06935 PF01416 tRNA pseudouridine synthase LCU_RS06940 PF00239 Resolvase, N terminal domain LCU_RS06940 PF02796 Helix-turn-helix domain of resolvase LCU_RS06945 PF02361 Cobalt transport protein LCU_RS06950 PF00005 ABC transporter LCU_RS06955 PF00005 ABC transporter LCU_RS06960 PF01196 Ribosomal protein L17 LCU_RS06965 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LCU_RS06965 PF01000 RNA polymerase Rpb3/RpoA insert domain LCU_RS06965 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LCU_RS06970 PF00411 Ribosomal protein S11 LCU_RS06975 PF00416 Ribosomal protein S13/S18 LCU_RS06980 PF00444 Ribosomal protein L36 LCU_RS06985 PF01176 Translation initiation factor 1A / IF-1 LCU_RS06990 PF05191 Adenylate kinase, active site lid LCU_RS06995 PF00344 SecY translocase LCU_RS07000 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LCU_RS07005 PF00327 Ribosomal protein L30p/L7e LCU_RS07010 PF03719 Ribosomal protein S5, C-terminal domain LCU_RS07010 PF00333 Ribosomal protein S5, N-terminal domain LCU_RS07015 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LCU_RS07020 PF00347 Ribosomal protein L6 LCU_RS07025 PF00410 Ribosomal protein S8 LCU_RS07030 PF00253 Ribosomal protein S14p/S29e LCU_RS07035 PF00281 Ribosomal protein L5 LCU_RS07035 PF00673 ribosomal L5P family C-terminus LCU_RS07040 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LCU_RS07040 PF00467 KOW motif LCU_RS07045 PF00238 Ribosomal protein L14p/L23e LCU_RS07050 PF00366 Ribosomal protein S17 LCU_RS07055 PF00831 Ribosomal L29 protein LCU_RS07060 PF00252 Ribosomal protein L16p/L10e LCU_RS07065 PF00189 Ribosomal protein S3, C-terminal domain LCU_RS07065 PF07650 KH domain LCU_RS07070 PF00237 Ribosomal protein L22p/L17e LCU_RS07075 PF00203 Ribosomal protein S19 LCU_RS07080 PF03947 Ribosomal Proteins L2, C-terminal domain LCU_RS07080 PF00181 Ribosomal Proteins L2, RNA binding domain LCU_RS07085 PF00276 Ribosomal protein L23 LCU_RS07090 PF00573 Ribosomal protein L4/L1 family LCU_RS07095 PF00297 Ribosomal protein L3 LCU_RS07100 PF00338 Ribosomal protein S10p/S20e LCU_RS07105 PF00857 Isochorismatase family LCU_RS07110 PF03193 RsgA GTPase LCU_RS07115 PF14492 Elongation Factor G, domain II LCU_RS07115 PF03144 Elongation factor Tu domain 2 LCU_RS07115 PF00009 Elongation factor Tu GTP binding domain LCU_RS07115 PF03764 Elongation factor G, domain IV LCU_RS07115 PF00679 Elongation factor G C-terminus LCU_RS07120 PF00177 Ribosomal protein S7p/S5e LCU_RS07125 PF00164 Ribosomal protein S12/S23 LCU_RS07130 PF01478 Type IV leader peptidase family LCU_RS07130 PF06750 Bacterial Peptidase A24 N-terminal domain LCU_RS07135 PF04997 RNA polymerase Rpb1, domain 1 LCU_RS07135 PF04983 RNA polymerase Rpb1, domain 3 LCU_RS07135 PF05000 RNA polymerase Rpb1, domain 4 LCU_RS07135 PF04998 RNA polymerase Rpb1, domain 5 LCU_RS07135 PF00623 RNA polymerase Rpb1, domain 2 LCU_RS07140 PF04565 RNA polymerase Rpb2, domain 3 LCU_RS07140 PF04563 RNA polymerase beta subunit LCU_RS07140 PF04561 RNA polymerase Rpb2, domain 2 LCU_RS07140 PF10385 RNA polymerase beta subunit external 1 domain LCU_RS07140 PF00562 RNA polymerase Rpb2, domain 6 LCU_RS07140 PF04560 RNA polymerase Rpb2, domain 7 LCU_RS07145 PF12849 PBP superfamily domain LCU_RS07150 PF06874 Firmicute fructose-1,6-bisphosphatase LCU_RS07155 PF07724 AAA domain (Cdc48 subfamily) LCU_RS07155 PF00004 ATPase family associated with various cellular activities (AAA) LCU_RS07155 PF02861 Clp amino terminal domain, pathogenicity island component LCU_RS07155 PF17871 AAA lid domain LCU_RS07155 PF10431 C-terminal, D2-small domain, of ClpB protein LCU_RS07160 PF17727 CtsR C-terminal dimerization domain LCU_RS07160 PF05848 CtsR N-terminal HTH domain LCU_RS07240 PF13545 Crp-like helix-turn-helix domain LCU_RS07240 PF00027 Cyclic nucleotide-binding domain LCU_RS07255 PF00403 Heavy-metal-associated domain LCU_RS07260 PF00232 Glycosyl hydrolase family 1 LCU_RS07265 PF02378 Phosphotransferase system, EIIC LCU_RS07270 PF00392 Bacterial regulatory proteins, gntR family LCU_RS07270 PF07702 UTRA domain LCU_RS07280 PF02403 Seryl-tRNA synthetase N-terminal domain LCU_RS07280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LCU_RS07295 PF01712 Deoxynucleoside kinase LCU_RS07320 PF00324 Amino acid permease LCU_RS07330 PF02082 Transcriptional regulator LCU_RS07350 PF03553 Na+/H+ antiporter family LCU_RS07355 PF09335 SNARE associated Golgi protein LCU_RS07360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LCU_RS07360 PF00205 Thiamine pyrophosphate enzyme, central domain LCU_RS07360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LCU_RS07365 PF04261 Dyp-type peroxidase family LCU_RS07370 PF08659 KR domain LCU_RS07370 PF16197 Ketoacyl-synthetase C-terminal extension LCU_RS07370 PF00109 Beta-ketoacyl synthase, N-terminal domain LCU_RS07370 PF14765 Polyketide synthase dehydratase LCU_RS07370 PF00550 Phosphopantetheine attachment site LCU_RS07370 PF02801 Beta-ketoacyl synthase, C-terminal domain LCU_RS07370 PF08240 Alcohol dehydrogenase GroES-like domain LCU_RS07370 PF00698 Acyl transferase domain LCU_RS07375 PF06736 Protein of unknown function (DUF1211) LCU_RS07385 PF08240 Alcohol dehydrogenase GroES-like domain LCU_RS07385 PF00107 Zinc-binding dehydrogenase LCU_RS07395 PF00005 ABC transporter LCU_RS07415 PF12704 MacB-like periplasmic core domain LCU_RS07415 PF02687 FtsX-like permease family LCU_RS07420 PF00005 ABC transporter LCU_RS07425 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LCU_RS07425 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LCU_RS07435 PF00271 Helicase conserved C-terminal domain LCU_RS07435 PF00570 HRDC domain LCU_RS07435 PF16124 RecQ zinc-binding LCU_RS07435 PF09382 RQC domain LCU_RS07435 PF00270 DEAD/DEAH box helicase LCU_RS07445 PF01161 Phosphatidylethanolamine-binding protein LCU_RS07460 PF02525 Flavodoxin-like fold LCU_RS07470 PF00300 Histidine phosphatase superfamily (branch 1) LCU_RS07485 PF00132 Bacterial transferase hexapeptide (six repeats) LCU_RS07490 PF13411 MerR HTH family regulatory protein LCU_RS07495 PF00528 Binding-protein-dependent transport system inner membrane component LCU_RS07500 PF00005 ABC transporter LCU_RS07500 PF00571 CBS domain LCU_RS07505 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCU_RS07505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCU_RS07510 PF07690 Major Facilitator Superfamily LCU_RS07530 PF02590 Predicted SPOUT methyltransferase LCU_RS07535 PF13180 PDZ domain LCU_RS07540 PF00753 Metallo-beta-lactamase superfamily LCU_RS07555 PF00672 HAMP domain LCU_RS07555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCU_RS07555 PF00512 His Kinase A (phospho-acceptor) domain LCU_RS07555 PF13426 PAS domain LCU_RS07560 PF00072 Response regulator receiver domain LCU_RS07560 PF00486 Transcriptional regulatory protein, C terminal LCU_RS07590 PF05525 Branched-chain amino acid transport protein LCU_RS07620 PF04203 Sortase domain LCU_RS07625 PF00860 Permease family LCU_RS07630 PF00709 Adenylosuccinate synthetase LCU_RS07645 PF00367 phosphotransferase system, EIIB LCU_RS07645 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LCU_RS07645 PF02378 Phosphotransferase system, EIIC LCU_RS07650 PF02110 Hydroxyethylthiazole kinase family LCU_RS07660 PF02581 Thiamine monophosphate synthase LCU_RS07665 PF12464 Maltose acetyltransferase LCU_RS07665 PF14602 Hexapeptide repeat of succinyl-transferase LCU_RS07670 PF01431 Peptidase family M13 LCU_RS07670 PF05649 Peptidase family M13 LCU_RS07675 PF02424 ApbE family LCU_RS07685 PF13732 Domain of unknown function (DUF4162) LCU_RS07685 PF00005 ABC transporter LCU_RS07705 PF00011 Hsp20/alpha crystallin family LCU_RS07710 PF07478 D-ala D-ala ligase C-terminus LCU_RS07710 PF01820 D-ala D-ala ligase N-terminus LCU_RS07725 PF01594 AI-2E family transporter LCU_RS07750 PF08546 Ketopantoate reductase PanE/ApbA C terminal LCU_RS07750 PF02558 Ketopantoate reductase PanE/ApbA LCU_RS07760 PF00005 ABC transporter LCU_RS07770 PF13673 Acetyltransferase (GNAT) domain LCU_RS07770 PF00958 GMP synthase C terminal domain LCU_RS07770 PF13302 Acetyltransferase (GNAT) domain LCU_RS07770 PF00117 Glutamine amidotransferase class-I LCU_RS07770 PF03352 Methyladenine glycosylase LCU_RS07775 PF00582 Universal stress protein family LCU_RS07785 PF13350 Tyrosine phosphatase family LCU_RS07790 PF08331 Domain of unknown function (DUF1730) LCU_RS07795 PF07690 Major Facilitator Superfamily LCU_RS07800 PF00005 ABC transporter LCU_RS07800 PF00571 CBS domain LCU_RS07805 PF00528 Binding-protein-dependent transport system inner membrane component LCU_RS07810 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LCU_RS07815 PF00528 Binding-protein-dependent transport system inner membrane component LCU_RS07830 PF00248 Aldo/keto reductase family LCU_RS07835 PF00571 CBS domain LCU_RS07835 PF03471 Transporter associated domain LCU_RS07835 PF01595 Cyclin M transmembrane N-terminal domain LCU_RS07840 PF02645 Uncharacterised protein, DegV family COG1307 LCU_RS07865 PF07972 NrdI Flavodoxin like LCU_RS07870 PF13419 Haloacid dehalogenase-like hydrolase LCU_RS07875 PF00326 Prolyl oligopeptidase family LCU_RS07885 PF06071 Protein of unknown function (DUF933) LCU_RS07885 PF01926 50S ribosome-binding GTPase LCU_RS07890 PF06107 Bacterial protein of unknown function (DUF951) LCU_RS07895 PF17762 HTH domain found in ParB protein LCU_RS07895 PF02195 ParB-like nuclease domain LCU_RS07900 PF13614 AAA domain LCU_RS07905 PF02195 ParB-like nuclease domain LCU_RS07905 PF17762 HTH domain found in ParB protein LCU_RS07910 PF02527 rRNA small subunit methyltransferase G LCU_RS07915 PF00860 Permease family LCU_RS07925 PF13439 Glycosyltransferase Family 4 LCU_RS07925 PF00534 Glycosyl transferases group 1 LCU_RS07930 PF00772 DnaB-like helicase N terminal domain LCU_RS07930 PF03796 DnaB-like helicase C terminal domain LCU_RS07935 PF03948 Ribosomal protein L9, C-terminal domain LCU_RS07935 PF01281 Ribosomal protein L9, N-terminal domain LCU_RS07940 PF02272 DHHA1 domain LCU_RS07940 PF01368 DHH family LCU_RS07945 PF01084 Ribosomal protein S18 LCU_RS07950 PF00436 Single-strand binding protein family LCU_RS07955 PF01250 Ribosomal protein S6 LCU_RS07960 PF00521 DNA gyrase/topoisomerase IV, subunit A LCU_RS07960 PF03989 DNA gyrase C-terminal domain, beta-propeller LCU_RS07965 PF00986 DNA gyrase B subunit, carboxyl terminus LCU_RS07965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCU_RS07965 PF00204 DNA gyrase B LCU_RS07965 PF01751 Toprim domain LCU_RS07970 PF02463 RecF/RecN/SMC N terminal domain LCU_RS07980 PF00712 DNA polymerase III beta subunit, N-terminal domain LCU_RS07980 PF02767 DNA polymerase III beta subunit, central domain LCU_RS07980 PF02768 DNA polymerase III beta subunit, C-terminal domain LCU_RS07985 PF08299 Bacterial dnaA protein helix-turn-helix LCU_RS07985 PF00308 Bacterial dnaA protein LCU_RS07990 PF00468 Ribosomal protein L34 LCU_RS07995 PF00825 Ribonuclease P LCU_RS08000 PF02096 60Kd inner membrane protein LCU_RS08020 PF12631 MnmE helical domain LCU_RS08020 PF01926 50S ribosome-binding GTPase LCU_RS08020 PF10396 GTP-binding protein TrmE N-terminus LCU_RS08025 PF01134 Glucose inhibited division protein A LCU_RS08025 PF13932 GidA associated domain LCU_RS08030 PF00005 ABC transporter LCU_RS08030 PF12848 ABC transporter LCU_RS08050 PF00892 EamA-like transporter family LCU_RS08060 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LCU_RS08060 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LCU_RS08065 PF07690 Major Facilitator Superfamily LCU_RS08070 PF03606 C4-dicarboxylate anaerobic carrier LCU_RS08075 PF10502 Signal peptidase, peptidase S26 LCU_RS08080 PF00300 Histidine phosphatase superfamily (branch 1) LCU_RS08100 PF08534 Redoxin LCU_RS08110 PF00877 NlpC/P60 family LCU_RS08115 PF00625 Guanylate kinase LCU_RS08125 PF01475 Ferric uptake regulator family LCU_RS08150 PF13936 Helix-turn-helix domain LCU_RS08160 PF01926 50S ribosome-binding GTPase LCU_RS08160 PF13167 GTP-binding GTPase N-terminal LCU_RS08160 PF16360 GTP-binding GTPase Middle Region LCU_RS08165 PF00480 ROK family LCU_RS08170 PF13520 Amino acid permease LCU_RS08180 PF00356 Bacterial regulatory proteins, lacI family LCU_RS08190 PF00528 Binding-protein-dependent transport system inner membrane component LCU_RS08195 PF00528 Binding-protein-dependent transport system inner membrane component LCU_RS08205 PF00005 ABC transporter LCU_RS08205 PF03459 TOBE domain LCU_RS08205 PF17912 MalK OB fold domain LCU_RS08210 PF03633 Glycosyl hydrolase family 65, C-terminal domain LCU_RS08210 PF03632 Glycosyl hydrolase family 65 central catalytic domain LCU_RS08210 PF03636 Glycosyl hydrolase family 65, N-terminal domain LCU_RS08215 PF13419 Haloacid dehalogenase-like hydrolase LCU_RS08220 PF02903 Alpha amylase, N-terminal ig-like domain LCU_RS08220 PF00128 Alpha amylase, catalytic domain LCU_RS08225 PF13520 Amino acid permease LCU_RS08230 PF00005 ABC transporter LCU_RS08240 PF00300 Histidine phosphatase superfamily (branch 1) LCU_RS08255 PF00561 alpha/beta hydrolase fold LCU_RS08260 PF02080 TrkA-C domain LCU_RS08260 PF00999 Sodium/hydrogen exchanger family LCU_RS08260 PF02254 TrkA-N domain LCU_RS08265 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LCU_RS08270 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LCU_RS08275 PF13538 UvrD-like helicase C-terminal domain LCU_RS08295 PF00485 Phosphoribulokinase / Uridine kinase family LCU_RS08300 PF02540 NAD synthase LCU_RS08300 PF00117 Glutamine amidotransferase class-I LCU_RS08300 PF00958 GMP synthase C terminal domain LCU_RS08315 PF00210 Ferritin-like domain LCU_RS08350 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCU_RS08350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCU_RS08385 PF09556 HaeIII restriction endonuclease LCU_RS08390 PF00145 C-5 cytosine-specific DNA methylase LCU_RS08420 PF00005 ABC transporter LCU_RS08425 PF00950 ABC 3 transport family LCU_RS08430 PF01297 Zinc-uptake complex component A periplasmic LCU_RS08435 PF01501 Glycosyl transferase family 8 LCU_RS08445 PF13350 Tyrosine phosphatase family LCU_RS08455 PF04226 Transglycosylase associated protein LCU_RS08470 PF03780 Asp23 family, cell envelope-related function LCU_RS08490 PF03577 Peptidase family C69 LCU_RS08505 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LCU_RS08505 PF00367 phosphotransferase system, EIIB LCU_RS08505 PF02378 Phosphotransferase system, EIIC LCU_RS08510 PF01380 SIS domain LCU_RS08510 PF01418 Helix-turn-helix domain, rpiR family LCU_RS08510 PF02685 Glucokinase LCU_RS08515 PF02378 Phosphotransferase system, EIIC LCU_RS08515 PF00367 phosphotransferase system, EIIB LCU_RS08520 PF01380 SIS domain LCU_RS08535 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LCU_RS08550 PF00005 ABC transporter LCU_RS08550 PF12848 ABC transporter LCU_RS08555 PF13520 Amino acid permease LCU_RS08570 PF00877 NlpC/P60 family LCU_RS08580 PF03577 Peptidase family C69 LCU_RS08590 PF00871 Acetokinase family LCU_RS08600 PF06800 Sugar transport protein LCU_RS08605 PF05025 RbsD / FucU transport protein family LCU_RS08610 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LCU_RS08610 PF00294 pfkB family carbohydrate kinase LCU_RS08615 PF00356 Bacterial regulatory proteins, lacI family LCU_RS08625 PF07690 Major Facilitator Superfamily LCU_RS08630 PF00300 Histidine phosphatase superfamily (branch 1) LCU_RS08635 PF02525 Flavodoxin-like fold LCU_RS08660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LCU_RS08660 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCU_RS08665 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LCU_RS08675 PF00581 Rhodanese-like domain LCU_RS08680 PF00085 Thioredoxin LCU_RS08685 PF01546 Peptidase family M20/M25/M40 LCU_RS08685 PF07687 Peptidase dimerisation domain LCU_RS08710 PF00356 Bacterial regulatory proteins, lacI family LCU_RS08720 PF00480 ROK family LCU_RS08730 PF00309 Sigma-54 factor, Activator interacting domain (AID) LCU_RS08730 PF04963 Sigma-54 factor, core binding domain LCU_RS08730 PF04552 Sigma-54, DNA binding domain LCU_RS08740 PF03610 PTS system fructose IIA component LCU_RS08740 PF00874 PRD domain LCU_RS08740 PF00158 Sigma-54 interaction domain LCU_RS08745 PF03610 PTS system fructose IIA component LCU_RS08750 PF03830 PTS system sorbose subfamily IIB component LCU_RS08755 PF03609 PTS system sorbose-specific iic component LCU_RS08760 PF03613 PTS system mannose/fructose/sorbose family IID component LCU_RS08780 PF03466 LysR substrate binding domain LCU_RS08780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LCU_RS08785 PF00132 Bacterial transferase hexapeptide (six repeats) LCU_RS08785 PF14602 Hexapeptide repeat of succinyl-transferase LCU_RS08785 PF12464 Maltose acetyltransferase LCU_RS08790 PF00106 short chain dehydrogenase LCU_RS08795 PF11838 ERAP1-like C-terminal domain LCU_RS08795 PF01433 Peptidase family M1 domain LCU_RS08805 PF00232 Glycosyl hydrolase family 1 LCU_RS08815 PF06100 MCRA family LCU_RS08825 PF13411 MerR HTH family regulatory protein LCU_RS08830 PF13673 Acetyltransferase (GNAT) domain LCU_RS08840 PF13936 Helix-turn-helix domain LCU_RS08840 PF00665 Integrase core domain LCU_RS08850 PF13936 Helix-turn-helix domain LCU_RS08850 PF00665 Integrase core domain LCU_RS08890 PF01566 Natural resistance-associated macrophage protein LCU_RS08915 PF09285 Elongation factor P, C-terminal LCU_RS08915 PF01132 Elongation factor P (EF-P) OB domain LCU_RS08915 PF08207 Elongation factor P (EF-P) KOW-like domain LCU_RS08925 PF01156 Inosine-uridine preferring nucleoside hydrolase LCU_RS08940 PF02028 BCCT, betaine/carnitine/choline family transporter LCU_RS08945 PF10400 Virulence activator alpha C-term LCU_RS08945 PF03551 Transcriptional regulator PadR-like family LCU_RS08950 PF00253 Ribosomal protein S14p/S29e LCU_RS08960 PF02909 Tetracyclin repressor-like, C-terminal domain LCU_RS08960 PF00440 Bacterial regulatory proteins, tetR family LCU_RS08970 PF00005 ABC transporter LCU_RS08970 PF00664 ABC transporter transmembrane region LCU_RS08975 PF13538 UvrD-like helicase C-terminal domain LCU_RS08985 PF13538 UvrD-like helicase C-terminal domain LCU_RS08990 PF01156 Inosine-uridine preferring nucleoside hydrolase LCU_RS08995 PF02608 ABC transporter substrate-binding protein PnrA-like LCU_RS09000 PF00005 ABC transporter LCU_RS09005 PF02653 Branched-chain amino acid transport system / permease component LCU_RS09010 PF02653 Branched-chain amino acid transport system / permease component LCU_RS09015 PF00232 Glycosyl hydrolase family 1 LCU_RS09020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCU_RS09020 PF05043 Mga helix-turn-helix domain LCU_RS09020 PF08279 HTH domain LCU_RS09020 PF00874 PRD domain LCU_RS09025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LCU_RS09025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LCU_RS09030 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LCU_RS09040 PF07748 Glycosyl hydrolases family 38 C-terminal domain LCU_RS09040 PF01074 Glycosyl hydrolases family 38 N-terminal domain LCU_RS09040 PF09261 Alpha mannosidase middle domain LCU_RS09045 PF07690 Major Facilitator Superfamily LCU_RS09050 PF13350 Tyrosine phosphatase family LCU_RS09055 PF00478 IMP dehydrogenase / GMP reductase domain LCU_RS09055 PF00571 CBS domain LCU_RS09060 PF00486 Transcriptional regulatory protein, C terminal LCU_RS09060 PF00072 Response regulator receiver domain LCU_RS09065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LCU_RS09065 PF00512 His Kinase A (phospho-acceptor) domain LCU_RS09065 PF00989 PAS fold LCU_RS09065 PF16736 Single Cache-like LCU_RS09070 PF07943 Penicillin-binding protein 5, C-terminal domain LCU_RS09070 PF00768 D-alanyl-D-alanine carboxypeptidase LCU_RS09075 PF02875 Mur ligase family, glutamate ligase domain LCU_RS09075 PF08245 Mur ligase middle domain LCU_RS09090 PF00005 ABC transporter LCU_RS09095 PF00950 ABC 3 transport family LCU_RS09100 PF08439 Oligopeptidase F LCU_RS09100 PF01432 Peptidase family M3 LCU_RS09105 PF03816 Cell envelope-related transcriptional attenuator domain LCU_RS09110 PF01773 Na+ dependent nucleoside transporter N-terminus LCU_RS09110 PF07662 Na+ dependent nucleoside transporter C-terminus LCU_RS09120 PF02938 GAD domain LCU_RS09120 PF01336 OB-fold nucleic acid binding domain LCU_RS09120 PF00152 tRNA synthetases class II (D, K and N) LCU_RS09125 PF01177 Asp/Glu/Hydantoin racemase LCU_RS09135 PF00155 Aminotransferase class I and II LCU_RS09140 PF00392 Bacterial regulatory proteins, gntR family LCU_RS09140 PF07702 UTRA domain LCU_RS09145 PF09363 XFP C-terminal domain LCU_RS09145 PF09364 XFP N-terminal domain LCU_RS09145 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase LCU_RS09150 PF00749 tRNA synthetases class I (E and Q), catalytic domain LCU_RS09155 PF01418 Helix-turn-helix domain, rpiR family LCU_RS09155 PF01380 SIS domain LCU_RS09160 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LCU_RS09160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LCU_RS09165 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LCU_RS09165 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LCU_RS09185 PF01566 Natural resistance-associated macrophage protein LCU_RS09190 PF02308 MgtC family LCU_RS09195 PF00860 Permease family LCU_RS09210 PF13520 Amino acid permease LCU_RS09215 PF00005 ABC transporter LCU_RS09215 PF00571 CBS domain LCU_RS09220 PF00528 Binding-protein-dependent transport system inner membrane component LCU_RS09225 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LCU_RS09270 PF02378 Phosphotransferase system, EIIC LCU_RS09275 PF01546 Peptidase family M20/M25/M40 LCU_RS09275 PF07687 Peptidase dimerisation domain LCU_RS09280 PF03051 Peptidase C1-like family LCU_RS09285 PF03051 Peptidase C1-like family LCU_RS09290 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LCU_RS09295 PF00692 dUTPase LCU_RS09300 PF18073 Rubredoxin metal binding domain LCU_RS09310 PF09190 DALR domain LCU_RS09310 PF01406 tRNA synthetases class I (C) catalytic domain LCU_RS09315 PF00636 Ribonuclease III domain LCU_RS09320 PF00588 SpoU rRNA Methylase family LCU_RS09320 PF08032 RNA 2'-O ribose methyltransferase substrate binding LCU_RS09325 PF05991 YacP-like NYN domain LCU_RS09335 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LCU_RS09345 PF00005 ABC transporter LCU_RS09345 PF16326 ABC transporter C-terminal domain LCU_RS09345 PF12848 ABC transporter LCU_RS09350 PF06971 Putative DNA-binding protein N-terminus LCU_RS09350 PF02629 CoA binding domain LCU_RS09355 PF02517 CPBP intramembrane metalloprotease LCU_RS09360 PF00166 Chaperonin 10 Kd subunit LCU_RS09365 PF00118 TCP-1/cpn60 chaperonin family LCU_RS09375 PF00877 NlpC/P60 family LCU_RS09380 PF13520 Amino acid permease LCU_RS09385 PF13277 YmdB-like protein LCU_RS09390 PF05192 MutS domain III LCU_RS09390 PF01624 MutS domain I LCU_RS09390 PF00488 MutS domain V LCU_RS09390 PF05188 MutS domain II LCU_RS09390 PF05190 MutS family domain IV LCU_RS09395 PF01119 DNA mismatch repair protein, C-terminal domain LCU_RS09395 PF08676 MutL C terminal dimerisation domain LCU_RS09400 PF02545 Maf-like protein LCU_RS09405 PF03641 Possible lysine decarboxylase LCU_RS09410 PF07499 RuvA, C-terminal domain LCU_RS09410 PF01330 RuvA N terminal domain LCU_RS09415 PF05491 RuvB C-terminal winged helix domain LCU_RS09415 PF17864 RuvB AAA lid domain LCU_RS09415 PF05496 Holliday junction DNA helicase RuvB P-loop domain LCU_RS09420 PF02547 Queuosine biosynthesis protein LCU_RS09430 PF01702 Queuine tRNA-ribosyltransferase LCU_RS09435 PF02699 Preprotein translocase subunit LCU_RS09440 PF00171 Aldehyde dehydrogenase family LCU_RS09440 PF00465 Iron-containing alcohol dehydrogenase LCU_RS09445 PF02742 Iron dependent repressor, metal binding and dimerisation domain LCU_RS09445 PF01325 Iron dependent repressor, N-terminal DNA binding domain LCU_RS09450 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LCU_RS09450 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LCU_RS09455 PF00817 impB/mucB/samB family LCU_RS09455 PF11799 impB/mucB/samB family C-terminal domain LCU_RS09460 PF03061 Thioesterase superfamily LCU_RS09460 PF00571 CBS domain LCU_RS09460 PF07085 DRTGG domain LCU_RS09460 PF00392 Bacterial regulatory proteins, gntR family LCU_RS09465 PF02272 DHHA1 domain LCU_RS09465 PF01368 DHH family LCU_RS09470 PF00270 DEAD/DEAH box helicase LCU_RS09470 PF00271 Helicase conserved C-terminal domain LCU_RS09480 PF02272 DHHA1 domain LCU_RS09480 PF01411 tRNA synthetases class II (A) LCU_RS09480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LCU_RS09485 PF06135 IreB regulatory phosphoprotein LCU_RS09490 PF03652 Holliday junction resolvase LCU_RS09495 PF06949 Protein of unknown function (DUF1292) LCU_RS09500 PF11858 Domain of unknown function (DUF3378) LCU_RS09500 PF01351 Ribonuclease HII LCU_RS09505 PF02674 Colicin V production protein LCU_RS09510 PF01713 Smr domain LCU_RS09510 PF00488 MutS domain V LCU_RS09515 PF00085 Thioredoxin LCU_RS09525 PF00501 AMP-binding enzyme LCU_RS09525 PF13193 AMP-binding enzyme C-terminal domain LCU_RS09530 PF03062 MBOAT, membrane-bound O-acyltransferase family LCU_RS09535 PF00550 Phosphopantetheine attachment site LCU_RS09540 PF04914 DltD protein LCU_RS09545 PF10702 Protein of unknown function (DUF2507) LCU_RS09550 PF01177 Asp/Glu/Hydantoin racemase LCU_RS09555 PF01725 Ham1 family LCU_RS09580 PF13683 Integrase core domain LCU_RS09580 PF01610 Transposase LCU_RS09590 PF00924 Mechanosensitive ion channel LCU_RS09605 PF01321 Creatinase/Prolidase N-terminal domain LCU_RS09605 PF00557 Metallopeptidase family M24 LCU_RS09610 PF00356 Bacterial regulatory proteins, lacI family LCU_RS09615 PF00912 Transglycosylase LCU_RS09615 PF00905 Penicillin binding protein transpeptidase domain LCU_RS09620 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LCU_RS09635 PF07690 Major Facilitator Superfamily LCU_RS09645 PF01546 Peptidase family M20/M25/M40 LCU_RS09650 PF00403 Heavy-metal-associated domain LCU_RS09655 PF01022 Bacterial regulatory protein, arsR family LCU_RS09660 PF03009 Glycerophosphoryl diester phosphodiesterase family LCU_RS09675 PF02872 5'-nucleotidase, C-terminal domain LCU_RS09680 PF06265 Protein of unknown function (DUF1027) LCU_RS09685 PF13344 Haloacid dehalogenase-like hydrolase LCU_RS09695 PF09335 SNARE associated Golgi protein LCU_RS09700 PF07992 Pyridine nucleotide-disulphide oxidoreductase LCU_RS09705 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LCU_RS09710 PF00480 ROK family LCU_RS09715 PF00575 S1 RNA binding domain LCU_RS09765 PF01594 AI-2E family transporter LCU_RS09780 PF01820 D-ala D-ala ligase N-terminus LCU_RS09780 PF07478 D-ala D-ala ligase C-terminus LCU_RS09785 PF00011 Hsp20/alpha crystallin family LCU_RS09805 PF13538 UvrD-like helicase C-terminal domain LCU_RS09810 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LCU_RS09815 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LCU_RS09820 PF00999 Sodium/hydrogen exchanger family LCU_RS09820 PF02254 TrkA-N domain LCU_RS09820 PF02080 TrkA-C domain LCU_RS09825 PF00561 alpha/beta hydrolase fold LCU_RS09840 PF00300 Histidine phosphatase superfamily (branch 1)