locus-tag class description LDB_RS00005 PF11638 DnaA N-terminal domain LDB_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix LDB_RS00005 PF00308 Bacterial dnaA protein LDB_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LDB_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LDB_RS00010 PF02767 DNA polymerase III beta subunit, central domain LDB_RS00020 PF02463 RecF/RecN/SMC N terminal domain LDB_RS00025 PF01751 Toprim domain LDB_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus LDB_RS00025 PF00204 DNA gyrase B LDB_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A LDB_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller LDB_RS00035 PF01250 Ribosomal protein S6 LDB_RS00040 PF00436 Single-strand binding protein family LDB_RS00045 PF01084 Ribosomal protein S18 LDB_RS00050 PF01368 DHH family LDB_RS00050 PF02272 DHHA1 domain LDB_RS00055 PF03948 Ribosomal protein L9, C-terminal domain LDB_RS00055 PF01281 Ribosomal protein L9, N-terminal domain LDB_RS00060 PF00772 DnaB-like helicase N terminal domain LDB_RS00060 PF03796 DnaB-like helicase C terminal domain LDB_RS00070 PF00005 ABC transporter LDB_RS00085 PF02308 MgtC family LDB_RS00100 PF00005 ABC transporter LDB_RS00100 PF08402 TOBE domain LDB_RS00120 PF00005 ABC transporter LDB_RS00120 PF00664 ABC transporter transmembrane region LDB_RS00125 PF00069 Protein kinase domain LDB_RS00135 PF00005 ABC transporter LDB_RS00140 PF03649 Uncharacterised protein family (UPF0014) LDB_RS00175 PF00271 Helicase conserved C-terminal domain LDB_RS00175 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) LDB_RS00175 PF04851 Type III restriction enzyme, res subunit LDB_RS00175 PF08463 EcoEI R protein C-terminal LDB_RS00200 PF01361 Tautomerase enzyme LDB_RS00230 PF01238 Phosphomannose isomerase type I LDB_RS00235 PF00480 ROK family LDB_RS00265 PF04545 Sigma-70, region 4 LDB_RS00265 PF04542 Sigma-70 region 2 LDB_RS00265 PF04539 Sigma-70 region 3 LDB_RS00270 PF00230 Major intrinsic protein LDB_RS00275 PF00128 Alpha amylase, catalytic domain LDB_RS00285 PF00535 Glycosyl transferase family 2 LDB_RS00295 PF02645 Uncharacterised protein, DegV family COG1307 LDB_RS00300 PF00563 EAL domain LDB_RS00300 PF13426 PAS domain LDB_RS00300 PF00990 Diguanylate cyclase, GGDEF domain LDB_RS00310 PF00300 Histidine phosphatase superfamily (branch 1) LDB_RS00335 PF02632 BioY family LDB_RS00345 PF13419 Haloacid dehalogenase-like hydrolase LDB_RS00355 PF03372 Endonuclease/Exonuclease/phosphatase family LDB_RS00365 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LDB_RS00365 PF00056 lactate/malate dehydrogenase, NAD binding domain LDB_RS00370 PF00248 Aldo/keto reductase family LDB_RS00375 PF02867 Ribonucleotide reductase, barrel domain LDB_RS00375 PF17975 Ribonucleotide reductase alpha domain LDB_RS00390 PF01923 Cobalamin adenosyltransferase LDB_RS00395 PF13936 Helix-turn-helix domain LDB_RS00400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDB_RS00400 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDB_RS00405 PF01565 FAD binding domain LDB_RS00405 PF02913 FAD linked oxidases, C-terminal domain LDB_RS00410 PF01327 Polypeptide deformylase LDB_RS00420 PF02664 S-Ribosylhomocysteinase (LuxS) LDB_RS00425 PF04204 Homoserine O-succinyltransferase LDB_RS00440 PF00664 ABC transporter transmembrane region LDB_RS00440 PF00005 ABC transporter LDB_RS00445 PF00664 ABC transporter transmembrane region LDB_RS00445 PF03412 Peptidase C39 family LDB_RS00445 PF00005 ABC transporter LDB_RS00460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB_RS00460 PF03466 LysR substrate binding domain LDB_RS00465 PF01717 Cobalamin-independent synthase, Catalytic domain LDB_RS00475 PF00480 ROK family LDB_RS00480 PF00056 lactate/malate dehydrogenase, NAD binding domain LDB_RS00480 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LDB_RS00485 PF07690 Major Facilitator Superfamily LDB_RS00500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB_RS00500 PF03466 LysR substrate binding domain LDB_RS00505 PF04205 FMN-binding domain LDB_RS00505 PF00890 FAD binding domain LDB_RS00545 PF00486 Transcriptional regulatory protein, C terminal LDB_RS00545 PF00072 Response regulator receiver domain LDB_RS00550 PF00672 HAMP domain LDB_RS00550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB_RS00550 PF13426 PAS domain LDB_RS00550 PF00512 His Kinase A (phospho-acceptor) domain LDB_RS00565 PF00753 Metallo-beta-lactamase superfamily LDB_RS00570 PF13180 PDZ domain LDB_RS00575 PF02590 Predicted SPOUT methyltransferase LDB_RS00610 PF00005 ABC transporter LDB_RS00615 PF07690 Major Facilitator Superfamily LDB_RS00625 PF00005 ABC transporter LDB_RS00655 PF01435 Peptidase family M48 LDB_RS00660 PF04011 LemA family LDB_RS00665 PF03600 Citrate transporter LDB_RS00675 PF00877 NlpC/P60 family LDB_RS00685 PF00005 ABC transporter LDB_RS00690 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS00695 PF02245 Methylpurine-DNA glycosylase (MPG) LDB_RS00700 PF04343 Protein of unknown function, DUF488 LDB_RS00705 PF02146 Sir2 family LDB_RS00715 PF13396 Phospholipase_D-nuclease N-terminal LDB_RS00715 PF13091 PLD-like domain LDB_RS00725 PF00075 RNase H LDB_RS00735 PF00535 Glycosyl transferase family 2 LDB_RS00740 PF00561 alpha/beta hydrolase fold LDB_RS00745 PF14572 Phosphoribosyl synthetase-associated domain LDB_RS00745 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LDB_RS00760 PF13545 Crp-like helix-turn-helix domain LDB_RS00760 PF00027 Cyclic nucleotide-binding domain LDB_RS00770 PF07478 D-ala D-ala ligase C-terminus LDB_RS00770 PF01820 D-ala D-ala ligase N-terminus LDB_RS00790 PF07859 alpha/beta hydrolase fold LDB_RS00790 PF13472 GDSL-like Lipase/Acylhydrolase family LDB_RS00795 PF11941 Domain of unknown function (DUF3459) LDB_RS00795 PF00128 Alpha amylase, catalytic domain LDB_RS00800 PF16657 Maltogenic Amylase, C-terminal domain LDB_RS00800 PF00128 Alpha amylase, catalytic domain LDB_RS00805 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS00810 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS00820 PF01979 Amidohydrolase family LDB_RS00825 PF05014 Nucleoside 2-deoxyribosyltransferase LDB_RS00835 PF13350 Tyrosine phosphatase family LDB_RS00840 PF00582 Universal stress protein family LDB_RS00850 PF00005 ABC transporter LDB_RS00855 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS00860 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS00865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDB_RS00880 PF13537 Glutamine amidotransferase domain LDB_RS00880 PF00733 Asparagine synthase LDB_RS00890 PF03477 ATP cone domain LDB_RS00890 PF13597 Anaerobic ribonucleoside-triphosphate reductase LDB_RS00910 PF07690 Major Facilitator Superfamily LDB_RS00920 PF01431 Peptidase family M13 LDB_RS00920 PF05649 Peptidase family M13 LDB_RS00925 PF02705 K+ potassium transporter LDB_RS00950 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LDB_RS00950 PF10135 Rod binding protein LDB_RS00955 PF01510 N-acetylmuramoyl-L-alanine amidase LDB_RS00955 PF13457 GW (Gly-Tryp) dipeptide domain LDB_RS00960 PF02080 TrkA-C domain LDB_RS00960 PF00999 Sodium/hydrogen exchanger family LDB_RS00960 PF02254 TrkA-N domain LDB_RS00975 PF00300 Histidine phosphatase superfamily (branch 1) LDB_RS00980 PF03816 Cell envelope-related transcriptional attenuator domain LDB_RS00985 PF02660 Glycerol-3-phosphate acyltransferase LDB_RS00990 PF00884 Sulfatase LDB_RS01025 PF01227 GTP cyclohydrolase I LDB_RS01025 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LDB_RS01030 PF08245 Mur ligase middle domain LDB_RS01035 PF00809 Pterin binding enzyme LDB_RS01040 PF00293 NUDIX domain LDB_RS01045 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS01050 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS01055 PF00005 ABC transporter LDB_RS01060 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDB_RS01070 PF00579 tRNA synthetases class I (W and Y) LDB_RS01070 PF01479 S4 domain LDB_RS01095 PF01546 Peptidase family M20/M25/M40 LDB_RS01095 PF07687 Peptidase dimerisation domain LDB_RS01115 PF01966 HD domain LDB_RS01125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDB_RS01130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDB_RS01140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDB_RS01145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDB_RS01150 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS01155 PF12911 N-terminal TM domain of oligopeptide transport permease C LDB_RS01155 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS01160 PF00005 ABC transporter LDB_RS01160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDB_RS01165 PF00005 ABC transporter LDB_RS01165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDB_RS01170 PF03051 Peptidase C1-like family LDB_RS01175 PF03051 Peptidase C1-like family LDB_RS01180 PF00011 Hsp20/alpha crystallin family LDB_RS01185 PF01272 Transcription elongation factor, GreA/GreB, C-term LDB_RS01185 PF03449 Transcription elongation factor, N-terminal LDB_RS01190 PF00709 Adenylosuccinate synthetase LDB_RS01195 PF00478 IMP dehydrogenase / GMP reductase domain LDB_RS01200 PF11799 impB/mucB/samB family C-terminal domain LDB_RS01200 PF11798 IMS family HHH motif LDB_RS01200 PF00817 impB/mucB/samB family LDB_RS01210 PF00860 Permease family LDB_RS01215 PF00156 Phosphoribosyl transferase domain LDB_RS01220 PF00571 CBS domain LDB_RS01220 PF00478 IMP dehydrogenase / GMP reductase domain LDB_RS01225 PF02540 NAD synthase LDB_RS01225 PF00958 GMP synthase C terminal domain LDB_RS01225 PF00117 Glutamine amidotransferase class-I LDB_RS01240 PF00069 Protein kinase domain LDB_RS01245 PF00664 ABC transporter transmembrane region LDB_RS01245 PF00005 ABC transporter LDB_RS01255 PF00232 Glycosyl hydrolase family 1 LDB_RS01270 PF00270 DEAD/DEAH box helicase LDB_RS01270 PF13749 Putative ATP-dependent DNA helicase recG C-terminal LDB_RS01270 PF17191 RecG wedge domain LDB_RS01280 PF02574 Homocysteine S-methyltransferase LDB_RS01290 PF01817 Chorismate mutase type II LDB_RS01290 PF02153 Prephenate dehydrogenase LDB_RS01300 PF00710 Asparaginase, N-terminal LDB_RS01300 PF17763 Glutaminase/Asparaginase C-terminal domain LDB_RS01315 PF01741 Large-conductance mechanosensitive channel, MscL LDB_RS01320 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LDB_RS01320 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain LDB_RS01320 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LDB_RS01330 PF00857 Isochorismatase family LDB_RS01350 PF01385 Probable transposase LDB_RS01350 PF12323 Helix-turn-helix domain LDB_RS01350 PF07282 Putative transposase DNA-binding domain LDB_RS01375 PF00005 ABC transporter LDB_RS01405 PF00579 tRNA synthetases class I (W and Y) LDB_RS01410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LDB_RS01420 PF00690 Cation transporter/ATPase, N-terminus LDB_RS01420 PF00689 Cation transporting ATPase, C-terminus LDB_RS01425 PF09334 tRNA synthetases class I (M) LDB_RS01425 PF08264 Anticodon-binding domain of tRNA LDB_RS01425 PF01588 Putative tRNA binding domain LDB_RS01430 PF01026 TatD related DNase LDB_RS01435 PF01751 Toprim domain LDB_RS01435 PF13331 Domain of unknown function (DUF4093) LDB_RS01440 PF00398 Ribosomal RNA adenine dimethylase LDB_RS01450 PF09182 Bacterial purine repressor, N-terminal LDB_RS01450 PF00156 Phosphoribosyl transferase domain LDB_RS01455 PF00132 Bacterial transferase hexapeptide (six repeats) LDB_RS01455 PF12804 MobA-like NTP transferase domain LDB_RS01465 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LDB_RS01465 PF14572 Phosphoribosyl synthetase-associated domain LDB_RS01470 PF01966 HD domain LDB_RS01480 PF05066 HB1, ASXL, restriction endonuclease HTH domain LDB_RS01485 PF00117 Glutamine amidotransferase class-I LDB_RS01485 PF06418 CTP synthase N-terminus LDB_RS01490 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LDB_RS01495 PF01197 Ribosomal protein L31 LDB_RS01500 PF02875 Mur ligase family, glutamate ligase domain LDB_RS01500 PF08245 Mur ligase middle domain LDB_RS01500 PF01225 Mur ligase family, catalytic domain LDB_RS01505 PF00270 DEAD/DEAH box helicase LDB_RS01505 PF00271 Helicase conserved C-terminal domain LDB_RS01510 PF01648 4'-phosphopantetheinyl transferase superfamily LDB_RS01515 PF00842 Alanine racemase, C-terminal domain LDB_RS01515 PF01168 Alanine racemase, N-terminal domain LDB_RS01525 PF01195 Peptidyl-tRNA hydrolase LDB_RS01530 PF00271 Helicase conserved C-terminal domain LDB_RS01530 PF17757 UvrB interaction domain LDB_RS01530 PF02559 CarD-like/TRCF domain LDB_RS01530 PF03461 TRCF domain LDB_RS01530 PF00270 DEAD/DEAH box helicase LDB_RS01535 PF01479 S4 domain LDB_RS01550 PF01171 PP-loop family LDB_RS01555 PF00004 ATPase family associated with various cellular activities (AAA) LDB_RS01555 PF06480 FtsH Extracellular LDB_RS01555 PF17862 AAA+ lid domain LDB_RS01555 PF01434 Peptidase family M41 LDB_RS01560 PF01430 Hsp33 protein LDB_RS01565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDB_RS01570 PF01546 Peptidase family M20/M25/M40 LDB_RS01570 PF07687 Peptidase dimerisation domain LDB_RS01575 PF01207 Dihydrouridine synthase (Dus) LDB_RS01580 PF00152 tRNA synthetases class II (D, K and N) LDB_RS01580 PF01336 OB-fold nucleic acid binding domain LDB_RS01590 PF00990 Diguanylate cyclase, GGDEF domain LDB_RS01600 PF01053 Cys/Met metabolism PLP-dependent enzyme LDB_RS01625 PF13185 GAF domain LDB_RS01630 PF10431 C-terminal, D2-small domain, of ClpB protein LDB_RS01630 PF02861 Clp amino terminal domain, pathogenicity island component LDB_RS01630 PF17871 AAA lid domain LDB_RS01630 PF07724 AAA domain (Cdc48 subfamily) LDB_RS01630 PF00004 ATPase family associated with various cellular activities (AAA) LDB_RS01640 PF04563 RNA polymerase beta subunit LDB_RS01640 PF04565 RNA polymerase Rpb2, domain 3 LDB_RS01640 PF10385 RNA polymerase beta subunit external 1 domain LDB_RS01640 PF00562 RNA polymerase Rpb2, domain 6 LDB_RS01640 PF04561 RNA polymerase Rpb2, domain 2 LDB_RS01640 PF04560 RNA polymerase Rpb2, domain 7 LDB_RS01645 PF04997 RNA polymerase Rpb1, domain 1 LDB_RS01645 PF00623 RNA polymerase Rpb1, domain 2 LDB_RS01645 PF05000 RNA polymerase Rpb1, domain 4 LDB_RS01645 PF04983 RNA polymerase Rpb1, domain 3 LDB_RS01645 PF04998 RNA polymerase Rpb1, domain 5 LDB_RS01655 PF00164 Ribosomal protein S12/S23 LDB_RS01660 PF00177 Ribosomal protein S7p/S5e LDB_RS01665 PF00679 Elongation factor G C-terminus LDB_RS01665 PF14492 Elongation Factor G, domain II LDB_RS01665 PF03764 Elongation factor G, domain IV LDB_RS01665 PF00009 Elongation factor Tu GTP binding domain LDB_RS01665 PF03144 Elongation factor Tu domain 2 LDB_RS01670 PF00338 Ribosomal protein S10p/S20e LDB_RS01675 PF00297 Ribosomal protein L3 LDB_RS01680 PF00573 Ribosomal protein L4/L1 family LDB_RS01685 PF00276 Ribosomal protein L23 LDB_RS01690 PF00181 Ribosomal Proteins L2, RNA binding domain LDB_RS01690 PF03947 Ribosomal Proteins L2, C-terminal domain LDB_RS01695 PF00203 Ribosomal protein S19 LDB_RS01700 PF00237 Ribosomal protein L22p/L17e LDB_RS01705 PF00189 Ribosomal protein S3, C-terminal domain LDB_RS01705 PF07650 KH domain LDB_RS01710 PF00252 Ribosomal protein L16p/L10e LDB_RS01715 PF00831 Ribosomal L29 protein LDB_RS01720 PF00366 Ribosomal protein S17 LDB_RS01725 PF00238 Ribosomal protein L14p/L23e LDB_RS01730 PF00467 KOW motif LDB_RS01730 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LDB_RS01735 PF00673 ribosomal L5P family C-terminus LDB_RS01735 PF00281 Ribosomal protein L5 LDB_RS01740 PF00410 Ribosomal protein S8 LDB_RS01745 PF00347 Ribosomal protein L6 LDB_RS01750 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LDB_RS01755 PF03719 Ribosomal protein S5, C-terminal domain LDB_RS01755 PF00333 Ribosomal protein S5, N-terminal domain LDB_RS01760 PF00327 Ribosomal protein L30p/L7e LDB_RS01765 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LDB_RS01770 PF00344 SecY translocase LDB_RS01775 PF05191 Adenylate kinase, active site lid LDB_RS01780 PF01176 Translation initiation factor 1A / IF-1 LDB_RS01785 PF00416 Ribosomal protein S13/S18 LDB_RS01790 PF00411 Ribosomal protein S11 LDB_RS01795 PF01000 RNA polymerase Rpb3/RpoA insert domain LDB_RS01795 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LDB_RS01795 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LDB_RS01800 PF01196 Ribosomal protein L17 LDB_RS01805 PF00005 ABC transporter LDB_RS01810 PF00005 ABC transporter LDB_RS01815 PF02361 Cobalt transport protein LDB_RS01820 PF01416 tRNA pseudouridine synthase LDB_RS01825 PF00572 Ribosomal protein L13 LDB_RS01830 PF00380 Ribosomal protein S9/S16 LDB_RS01845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDB_RS01850 PF00293 NUDIX domain LDB_RS01860 PF01161 Phosphatidylethanolamine-binding protein LDB_RS01870 PF00155 Aminotransferase class I and II LDB_RS01905 PF07702 UTRA domain LDB_RS01905 PF00392 Bacterial regulatory proteins, gntR family LDB_RS01910 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LDB_RS01920 PF03808 Glycosyl transferase WecB/TagA/CpsF family LDB_RS01935 PF02540 NAD synthase LDB_RS01940 PF00690 Cation transporter/ATPase, N-terminus LDB_RS01940 PF00689 Cation transporting ATPase, C-terminus LDB_RS01955 PF00005 ABC transporter LDB_RS01960 PF10263 SprT-like family LDB_RS01975 PF13457 GW (Gly-Tryp) dipeptide domain LDB_RS01975 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LDB_RS01980 PF13361 UvrD-like helicase C-terminal domain LDB_RS01980 PF00580 UvrD/REP helicase N-terminal domain LDB_RS01985 PF00533 BRCA1 C Terminus (BRCT) domain LDB_RS01985 PF03120 NAD-dependent DNA ligase OB-fold domain LDB_RS01985 PF12826 Helix-hairpin-helix motif LDB_RS01985 PF01653 NAD-dependent DNA ligase adenylation domain LDB_RS01985 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LDB_RS01990 PF07537 CamS sex pheromone cAM373 precursor LDB_RS01995 PF02686 Glu-tRNAGln amidotransferase C subunit LDB_RS02000 PF01425 Amidase LDB_RS02005 PF02934 GatB/GatE catalytic domain LDB_RS02005 PF02637 GatB domain LDB_RS02010 PF00781 Diacylglycerol kinase catalytic domain LDB_RS02015 PF06736 Protein of unknown function (DUF1211) LDB_RS02020 PF05958 tRNA (Uracil-5-)-methyltransferase LDB_RS02020 PF01938 TRAM domain LDB_RS02030 PF00194 Eukaryotic-type carbonic anhydrase LDB_RS02060 PF00027 Cyclic nucleotide-binding domain LDB_RS02060 PF13545 Crp-like helix-turn-helix domain LDB_RS02065 PF05525 Branched-chain amino acid transport protein LDB_RS02100 PF06993 Protein of unknown function (DUF1304) LDB_RS02105 PF01037 Lrp/AsnC ligand binding domain LDB_RS02110 PF01380 SIS domain LDB_RS02120 PF01232 Mannitol dehydrogenase Rossmann domain LDB_RS02120 PF08125 Mannitol dehydrogenase C-terminal domain LDB_RS02125 PF08125 Mannitol dehydrogenase C-terminal domain LDB_RS02125 PF01232 Mannitol dehydrogenase Rossmann domain LDB_RS02130 PF08125 Mannitol dehydrogenase C-terminal domain LDB_RS02130 PF01232 Mannitol dehydrogenase Rossmann domain LDB_RS02135 PF00311 Phosphoenolpyruvate carboxylase LDB_RS02145 PF00005 ABC transporter LDB_RS02145 PF12848 ABC transporter LDB_RS02150 PF00083 Sugar (and other) transporter LDB_RS02155 PF00083 Sugar (and other) transporter LDB_RS02170 PF07690 Major Facilitator Superfamily LDB_RS02175 PF01027 Inhibitor of apoptosis-promoting Bax1 LDB_RS02180 PF01177 Asp/Glu/Hydantoin racemase LDB_RS02185 PF03577 Peptidase family C69 LDB_RS02200 PF00485 Phosphoribulokinase / Uridine kinase family LDB_RS02205 PF00485 Phosphoribulokinase / Uridine kinase family LDB_RS02210 PF00005 ABC transporter LDB_RS02215 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDB_RS02220 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS02225 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS02230 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDB_RS02240 PF02503 Polyphosphate kinase middle domain LDB_RS02240 PF13090 Polyphosphate kinase C-terminal domain 2 LDB_RS02240 PF13089 Polyphosphate kinase N-terminal domain LDB_RS02240 PF17941 Polyphosphate kinase C-terminal domain 1 LDB_RS02265 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LDB_RS02265 PF00294 pfkB family carbohydrate kinase LDB_RS02270 PF00834 Ribulose-phosphate 3 epimerase family LDB_RS02275 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LDB_RS02280 PF01156 Inosine-uridine preferring nucleoside hydrolase LDB_RS02285 PF07702 UTRA domain LDB_RS02285 PF00392 Bacterial regulatory proteins, gntR family LDB_RS02290 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase LDB_RS02290 PF09363 XFP C-terminal domain LDB_RS02290 PF09364 XFP N-terminal domain LDB_RS02305 PF00571 CBS domain LDB_RS02305 PF01595 Cyclin M transmembrane N-terminal domain LDB_RS02305 PF03471 Transporter associated domain LDB_RS02310 PF01171 PP-loop family LDB_RS02310 PF11734 TilS substrate C-terminal domain LDB_RS02310 PF00156 Phosphoribosyl transferase domain LDB_RS02315 PF13520 Amino acid permease LDB_RS02325 PF00270 DEAD/DEAH box helicase LDB_RS02325 PF00271 Helicase conserved C-terminal domain LDB_RS02330 PF02378 Phosphotransferase system, EIIC LDB_RS02345 PF00860 Permease family LDB_RS02350 PF06838 Methionine gamma-lyase LDB_RS02355 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LDB_RS02355 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LDB_RS02355 PF01276 Orn/Lys/Arg decarboxylase, major domain LDB_RS02375 PF02350 UDP-N-acetylglucosamine 2-epimerase LDB_RS02385 PF00258 Flavodoxin LDB_RS02390 PF00557 Metallopeptidase family M24 LDB_RS02395 PF03631 Virulence factor BrkB LDB_RS02400 PF00483 Nucleotidyl transferase LDB_RS02415 PF01938 TRAM domain LDB_RS02415 PF05958 tRNA (Uracil-5-)-methyltransferase LDB_RS02420 PF02631 RecX family LDB_RS02440 PF00009 Elongation factor Tu GTP binding domain LDB_RS02440 PF16658 Class II release factor RF3, C-terminal domain LDB_RS02460 PF00004 ATPase family associated with various cellular activities (AAA) LDB_RS02460 PF07724 AAA domain (Cdc48 subfamily) LDB_RS02460 PF17871 AAA lid domain LDB_RS02460 PF10431 C-terminal, D2-small domain, of ClpB protein LDB_RS02470 PF00381 PTS HPr component phosphorylation site LDB_RS02475 PF00391 PEP-utilising enzyme, mobile domain LDB_RS02475 PF05524 PEP-utilising enzyme, N-terminal LDB_RS02475 PF02896 PEP-utilising enzyme, TIM barrel domain LDB_RS02480 PF03960 ArsC family LDB_RS02485 PF05389 Negative regulator of genetic competence (MecA) LDB_RS02505 PF04607 Region found in RelA / SpoT proteins LDB_RS02510 PF01513 ATP-NAD kinase LDB_RS02515 PF00849 RNA pseudouridylate synthase LDB_RS02525 PF02673 Bacitracin resistance protein BacA LDB_RS02530 PF10282 Lactonase, 7-bladed beta-propeller LDB_RS02540 PF01594 AI-2E family transporter LDB_RS02545 PF00588 SpoU rRNA Methylase family LDB_RS02555 PF17854 FtsK alpha domain LDB_RS02555 PF09397 Ftsk gamma domain LDB_RS02555 PF01580 FtsK/SpoIIIE family LDB_RS02575 PF13464 Domain of unknown function (DUF4115) LDB_RS02580 PF01066 CDP-alcohol phosphatidyltransferase LDB_RS02585 PF00154 recA bacterial DNA recombination protein LDB_RS02595 PF01966 HD domain LDB_RS02595 PF12072 Domain of unknown function (DUF3552) LDB_RS02595 PF00013 KH domain LDB_RS02600 PF00953 Glycosyl transferase family 4 LDB_RS02605 PF09186 Domain of unknown function (DUF1949) LDB_RS02605 PF01205 Uncharacterized protein family UPF0029 LDB_RS02610 PF00271 Helicase conserved C-terminal domain LDB_RS02610 PF04851 Type III restriction enzyme, res subunit LDB_RS02620 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LDB_RS02620 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LDB_RS02625 PF07517 SecA DEAD-like domain LDB_RS02625 PF01043 SecA preprotein cross-linking domain LDB_RS02625 PF07516 SecA Wing and Scaffold domain LDB_RS02630 PF00472 RF-1 domain LDB_RS02630 PF03462 PCRF domain LDB_RS02640 PF02603 HPr Serine kinase N terminus LDB_RS02640 PF07475 HPr Serine kinase C-terminal domain LDB_RS02645 PF01790 Prolipoprotein diacylglyceryl transferase LDB_RS02650 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LDB_RS02650 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LDB_RS02655 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDB_RS02660 PF00271 Helicase conserved C-terminal domain LDB_RS02660 PF04851 Type III restriction enzyme, res subunit LDB_RS02660 PF02151 UvrB/uvrC motif LDB_RS02660 PF12344 Ultra-violet resistance protein B LDB_RS02660 PF17757 UvrB interaction domain LDB_RS02665 PF17755 UvrA DNA-binding domain LDB_RS02665 PF00005 ABC transporter LDB_RS02665 PF17760 UvrA interaction domain LDB_RS02680 PF03576 Peptidase family S58 LDB_RS02685 PF03668 P-loop ATPase protein family LDB_RS02690 PF01933 Uncharacterised protein family UPF0052 LDB_RS02695 PF14527 WhiA LAGLIDADG-like domain LDB_RS02695 PF10298 WhiA N-terminal LAGLIDADG-like domain LDB_RS02695 PF02650 WhiA C-terminal HTH domain LDB_RS02700 PF00574 Clp protease LDB_RS02715 PF02653 Branched-chain amino acid transport system / permease component LDB_RS02720 PF00005 ABC transporter LDB_RS02730 PF04198 Putative sugar-binding domain LDB_RS02735 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LDB_RS02735 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LDB_RS02740 PF00162 Phosphoglycerate kinase LDB_RS02745 PF00121 Triosephosphate isomerase LDB_RS02770 PF03167 Uracil DNA glycosylase superfamily LDB_RS02775 PF01515 Phosphate acetyl/butaryl transferase LDB_RS02780 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LDB_RS02790 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LDB_RS02790 PF01565 FAD binding domain LDB_RS02795 PF00005 ABC transporter LDB_RS02795 PF08402 TOBE domain LDB_RS02805 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS02810 PF13416 Bacterial extracellular solute-binding protein LDB_RS02815 PF02457 DisA bacterial checkpoint controller nucleotide-binding LDB_RS02825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LDB_RS02825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LDB_RS02825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LDB_RS02825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LDB_RS02840 PF00144 Beta-lactamase LDB_RS02845 PF03965 Penicillinase repressor LDB_RS02855 PF00403 Heavy-metal-associated domain LDB_RS02860 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LDB_RS02865 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LDB_RS02885 PF00990 Diguanylate cyclase, GGDEF domain LDB_RS02900 PF01451 Low molecular weight phosphotyrosine protein phosphatase LDB_RS02910 PF13520 Amino acid permease LDB_RS02915 PF01625 Peptide methionine sulfoxide reductase LDB_RS02925 PF01297 Zinc-uptake complex component A periplasmic LDB_RS02935 PF01709 Transcriptional regulator LDB_RS02940 PF00437 Type II/IV secretion system protein LDB_RS02950 PF08334 Type II secretion system (T2SS), protein G LDB_RS02950 PF07963 Prokaryotic N-terminal methylation motif LDB_RS02970 PF02384 N-6 DNA Methylase LDB_RS02975 PF00871 Acetokinase family LDB_RS02985 PF00486 Transcriptional regulatory protein, C terminal LDB_RS02985 PF00072 Response regulator receiver domain LDB_RS02990 PF00672 HAMP domain LDB_RS02990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB_RS02990 PF00512 His Kinase A (phospho-acceptor) domain LDB_RS02995 PF00884 Sulfatase LDB_RS03005 PF00342 Phosphoglucose isomerase LDB_RS03025 PF00144 Beta-lactamase LDB_RS03035 PF08245 Mur ligase middle domain LDB_RS03035 PF08353 Domain of unknown function (DUF1727) LDB_RS03040 PF00265 Thymidine kinase LDB_RS03045 PF00472 RF-1 domain LDB_RS03045 PF03462 PCRF domain LDB_RS03050 PF05175 Methyltransferase small domain LDB_RS03055 PF03481 Putative GTP-binding controlling metal-binding LDB_RS03055 PF01300 Telomere recombination LDB_RS03065 PF00119 ATP synthase A chain LDB_RS03070 PF00137 ATP synthase subunit C LDB_RS03075 PF00430 ATP synthase B/B' CF(0) LDB_RS03080 PF00213 ATP synthase delta (OSCP) subunit LDB_RS03085 PF00306 ATP synthase alpha/beta chain, C terminal domain LDB_RS03085 PF02874 ATP synthase alpha/beta family, beta-barrel domain LDB_RS03085 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDB_RS03090 PF00231 ATP synthase LDB_RS03095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDB_RS03095 PF02874 ATP synthase alpha/beta family, beta-barrel domain LDB_RS03100 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LDB_RS03100 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LDB_RS03115 PF01809 Putative membrane protein insertion efficiency factor LDB_RS03125 PF01098 Cell cycle protein LDB_RS03130 PF00582 Universal stress protein family LDB_RS03140 PF12002 MgsA AAA+ ATPase C terminal LDB_RS03140 PF16193 AAA C-terminal domain LDB_RS03140 PF05496 Holliday junction DNA helicase RuvB P-loop domain LDB_RS03150 PF01479 S4 domain LDB_RS03150 PF00163 Ribosomal protein S4/S9 N-terminal domain LDB_RS03155 PF06160 Septation ring formation regulator, EzrA LDB_RS03160 PF00266 Aminotransferase class-V LDB_RS03165 PF02926 THUMP domain LDB_RS03165 PF02568 Thiamine biosynthesis protein (ThiI) LDB_RS03170 PF01479 S4 domain LDB_RS03170 PF00849 RNA pseudouridylate synthase LDB_RS03175 PF08264 Anticodon-binding domain of tRNA LDB_RS03175 PF10458 Valyl tRNA synthetase tRNA binding arm LDB_RS03175 PF00133 tRNA synthetases class I (I, L, M and V) LDB_RS03180 PF08245 Mur ligase middle domain LDB_RS03180 PF02875 Mur ligase family, glutamate ligase domain LDB_RS03185 PF13419 Haloacid dehalogenase-like hydrolase LDB_RS03190 PF04002 RadC-like JAB domain LDB_RS03200 PF04085 rod shape-determining protein MreC LDB_RS03220 PF02381 MraZ protein, putative antitoxin-like LDB_RS03225 PF01795 MraW methylase family LDB_RS03235 PF03717 Penicillin-binding Protein dimerisation domain LDB_RS03235 PF00905 Penicillin binding protein transpeptidase domain LDB_RS03235 PF03793 PASTA domain LDB_RS03240 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LDB_RS03240 PF00953 Glycosyl transferase family 4 LDB_RS03245 PF02875 Mur ligase family, glutamate ligase domain LDB_RS03245 PF08245 Mur ligase middle domain LDB_RS03250 PF04101 Glycosyltransferase family 28 C-terminal domain LDB_RS03250 PF03033 Glycosyltransferase family 28 N-terminal domain LDB_RS03255 PF03799 Cell division protein FtsQ LDB_RS03255 PF08478 POTRA domain, FtsQ-type LDB_RS03260 PF11983 Membrane-attachment and polymerisation-promoting switch LDB_RS03260 PF02491 SHS2 domain inserted in FTSA LDB_RS03265 PF00091 Tubulin/FtsZ family, GTPase domain LDB_RS03265 PF12327 FtsZ family, C-terminal domain LDB_RS03270 PF04472 Cell division protein SepF LDB_RS03285 PF08264 Anticodon-binding domain of tRNA LDB_RS03285 PF00133 tRNA synthetases class I (I, L, M and V) LDB_RS03285 PF06827 Zinc finger found in FPG and IleRS LDB_RS03290 PF00313 'Cold-shock' DNA-binding domain LDB_RS03305 PF01048 Phosphorylase superfamily LDB_RS03310 PF00266 Aminotransferase class-V LDB_RS03325 PF00300 Histidine phosphatase superfamily (branch 1) LDB_RS03335 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LDB_RS03335 PF13538 UvrD-like helicase C-terminal domain LDB_RS03335 PF14490 Helix-hairpin-helix containing domain LDB_RS03340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDB_RS03340 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDB_RS03345 PF17770 Ribonuclease J C-terminal domain LDB_RS03345 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LDB_RS03345 PF00753 Metallo-beta-lactamase superfamily LDB_RS03350 PF07288 Protein of unknown function (DUF1447) LDB_RS03355 PF01327 Polypeptide deformylase LDB_RS03360 PF03144 Elongation factor Tu domain 2 LDB_RS03360 PF00679 Elongation factor G C-terminus LDB_RS03360 PF14492 Elongation Factor G, domain II LDB_RS03360 PF00009 Elongation factor Tu GTP binding domain LDB_RS03365 PF01098 Cell cycle protein LDB_RS03370 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) LDB_RS03380 PF01467 Cytidylyltransferase-like LDB_RS03385 PF13180 PDZ domain LDB_RS03385 PF05362 Lon protease (S16) C-terminal proteolytic domain LDB_RS03395 PF13567 Domain of unknown function (DUF4131) LDB_RS03395 PF00753 Metallo-beta-lactamase superfamily LDB_RS03395 PF03772 Competence protein LDB_RS03400 PF06144 DNA polymerase III, delta subunit LDB_RS03405 PF01649 Ribosomal protein S20 LDB_RS03410 PF00312 Ribosomal protein S15 LDB_RS03415 PF00753 Metallo-beta-lactamase superfamily LDB_RS03415 PF17770 Ribonuclease J C-terminal domain LDB_RS03415 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LDB_RS03425 PF03143 Elongation factor Tu C-terminal domain LDB_RS03425 PF00009 Elongation factor Tu GTP binding domain LDB_RS03425 PF03144 Elongation factor Tu domain 2 LDB_RS03430 PF05697 Bacterial trigger factor protein (TF) LDB_RS03430 PF05698 Bacterial trigger factor protein (TF) C-terminus LDB_RS03430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDB_RS03435 PF06689 ClpX C4-type zinc finger LDB_RS03435 PF10431 C-terminal, D2-small domain, of ClpB protein LDB_RS03435 PF07724 AAA domain (Cdc48 subfamily) LDB_RS03440 PF01926 50S ribosome-binding GTPase LDB_RS03455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDB_RS03465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDB_RS03465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDB_RS03470 PF00303 Thymidylate synthase LDB_RS03475 PF00186 Dihydrofolate reductase LDB_RS03485 PF03180 NLPA lipoprotein LDB_RS03490 PF09383 NIL domain LDB_RS03490 PF00005 ABC transporter LDB_RS03495 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS03500 PF14537 Cytochrome c3 LDB_RS03500 PF00890 FAD binding domain LDB_RS03540 PF01717 Cobalamin-independent synthase, Catalytic domain LDB_RS03545 PF00155 Aminotransferase class I and II LDB_RS03550 PF03466 LysR substrate binding domain LDB_RS03550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB_RS03555 PF00750 tRNA synthetases class I (R) LDB_RS03555 PF05746 DALR anticodon binding domain LDB_RS03555 PF03485 Arginyl tRNA synthetase N terminal domain LDB_RS03560 PF01316 Arginine repressor, DNA binding domain LDB_RS03560 PF02863 Arginine repressor, C-terminal domain LDB_RS03565 PF04127 DNA / pantothenate metabolism flavoprotein LDB_RS03565 PF02441 Flavoprotein LDB_RS03575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDB_RS03575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDB_RS03580 PF09382 RQC domain LDB_RS03580 PF16124 RecQ zinc-binding LDB_RS03580 PF00270 DEAD/DEAH box helicase LDB_RS03580 PF00570 HRDC domain LDB_RS03580 PF00271 Helicase conserved C-terminal domain LDB_RS03585 PF01156 Inosine-uridine preferring nucleoside hydrolase LDB_RS03590 PF08459 UvrC Helix-hairpin-helix N-terminal LDB_RS03590 PF01541 GIY-YIG catalytic domain LDB_RS03590 PF02151 UvrB/uvrC motif LDB_RS03595 PF01926 50S ribosome-binding GTPase LDB_RS03595 PF01018 GTP1/OBG LDB_RS03595 PF09269 Domain of unknown function (DUF1967) LDB_RS03605 PF12706 Beta-lactamase superfamily domain LDB_RS03610 PF00106 short chain dehydrogenase LDB_RS03615 PF02872 5'-nucleotidase, C-terminal domain LDB_RS03615 PF00149 Calcineurin-like phosphoesterase LDB_RS03635 PF04260 Protein of unknown function (DUF436) LDB_RS03665 PF07733 Bacterial DNA polymerase III alpha NTPase domain LDB_RS03665 PF01336 OB-fold nucleic acid binding domain LDB_RS03665 PF14579 Helix-hairpin-helix motif LDB_RS03665 PF02811 PHP domain LDB_RS03665 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LDB_RS03670 PF00365 Phosphofructokinase LDB_RS03675 PF02887 Pyruvate kinase, alpha/beta domain LDB_RS03675 PF00224 Pyruvate kinase, barrel domain LDB_RS03675 PF00391 PEP-utilising enzyme, mobile domain LDB_RS03680 PF00005 ABC transporter LDB_RS03690 PF13509 S1 domain LDB_RS03690 PF17783 CvfB-like winged helix domain LDB_RS03695 PF02899 Phage integrase, N-terminal SAM-like domain LDB_RS03695 PF00589 Phage integrase family LDB_RS03700 PF00583 Acetyltransferase (GNAT) family LDB_RS03705 PF02616 Segregation and condensation protein ScpA LDB_RS03710 PF04079 Segregation and condensation complex subunit ScpB LDB_RS03715 PF01479 S4 domain LDB_RS03715 PF00849 RNA pseudouridylate synthase LDB_RS03720 PF12822 ECF transporter, substrate-specific component LDB_RS03730 PF02224 Cytidylate kinase LDB_RS03735 PF00575 S1 RNA binding domain LDB_RS03740 PF01926 50S ribosome-binding GTPase LDB_RS03740 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LDB_RS03745 PF00216 Bacterial DNA-binding protein LDB_RS03765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB_RS03765 PF03466 LysR substrate binding domain LDB_RS03790 PF00206 Lyase LDB_RS03790 PF14698 Argininosuccinate lyase C-terminal LDB_RS03805 PF18395 Cas3 C-terminal domain LDB_RS03805 PF18019 HD domain LDB_RS03805 PF00270 DEAD/DEAH box helicase LDB_RS03820 PF09344 CT1975-like protein LDB_RS03835 PF01867 CRISPR associated protein Cas1 LDB_RS03840 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) LDB_RS03845 PF04607 Region found in RelA / SpoT proteins LDB_RS03850 PF00486 Transcriptional regulatory protein, C terminal LDB_RS03850 PF00072 Response regulator receiver domain LDB_RS03855 PF00512 His Kinase A (phospho-acceptor) domain LDB_RS03855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB_RS03860 PF02803 Thiolase, C-terminal domain LDB_RS03860 PF00108 Thiolase, N-terminal domain LDB_RS03865 PF00368 Hydroxymethylglutaryl-coenzyme A reductase LDB_RS03870 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal LDB_RS03870 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal LDB_RS03880 PF04073 Aminoacyl-tRNA editing domain LDB_RS03890 PF02824 TGS domain LDB_RS03890 PF04607 Region found in RelA / SpoT proteins LDB_RS03890 PF13291 ACT domain LDB_RS03895 PF02580 D-Tyr-tRNA(Tyr) deacylase LDB_RS03900 PF03129 Anticodon binding domain LDB_RS03900 PF13393 Histidyl-tRNA synthetase LDB_RS03905 PF02938 GAD domain LDB_RS03905 PF00152 tRNA synthetases class II (D, K and N) LDB_RS03905 PF01336 OB-fold nucleic acid binding domain LDB_RS03940 PF01594 AI-2E family transporter LDB_RS03945 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LDB_RS03945 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LDB_RS03950 PF00550 Phosphopantetheine attachment site LDB_RS03955 PF00698 Acyl transferase domain LDB_RS03965 PF00109 Beta-ketoacyl synthase, N-terminal domain LDB_RS03965 PF02801 Beta-ketoacyl synthase, C-terminal domain LDB_RS03970 PF00364 Biotin-requiring enzyme LDB_RS03975 PF07977 FabA-like domain LDB_RS03980 PF02785 Biotin carboxylase C-terminal domain LDB_RS03980 PF00289 Biotin carboxylase, N-terminal domain LDB_RS03980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDB_RS03985 PF01039 Carboxyl transferase domain LDB_RS03990 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LDB_RS04000 PF03099 Biotin/lipoate A/B protein ligase family LDB_RS04000 PF02237 Biotin protein ligase C terminal domain LDB_RS04000 PF03309 Type III pantothenate kinase LDB_RS04030 PF00465 Iron-containing alcohol dehydrogenase LDB_RS04035 PF00171 Aldehyde dehydrogenase family LDB_RS04035 PF00465 Iron-containing alcohol dehydrogenase LDB_RS04065 PF00588 SpoU rRNA Methylase family LDB_RS04160 PF12792 CSS motif domain associated with EAL LDB_RS04160 PF00563 EAL domain LDB_RS04180 PF12849 PBP superfamily domain LDB_RS04185 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS04190 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS04195 PF00005 ABC transporter LDB_RS04200 PF01895 PhoU domain LDB_RS04210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB_RS04210 PF00512 His Kinase A (phospho-acceptor) domain LDB_RS04215 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family LDB_RS04225 PF00005 ABC transporter LDB_RS04255 PF00005 ABC transporter LDB_RS04260 PF00005 ABC transporter LDB_RS04280 PF12792 CSS motif domain associated with EAL LDB_RS04280 PF00563 EAL domain LDB_RS04285 PF00990 Diguanylate cyclase, GGDEF domain LDB_RS04315 PF00005 ABC transporter LDB_RS04315 PF00664 ABC transporter transmembrane region LDB_RS04320 PF00005 ABC transporter LDB_RS04320 PF00664 ABC transporter transmembrane region LDB_RS04325 PF00664 ABC transporter transmembrane region LDB_RS04325 PF00005 ABC transporter LDB_RS04330 PF02660 Glycerol-3-phosphate acyltransferase LDB_RS04335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB_RS04335 PF00986 DNA gyrase B subunit, carboxyl terminus LDB_RS04335 PF00204 DNA gyrase B LDB_RS04335 PF01751 Toprim domain LDB_RS04340 PF03989 DNA gyrase C-terminal domain, beta-propeller LDB_RS04340 PF00521 DNA gyrase/topoisomerase IV, subunit A LDB_RS04345 PF01368 DHH family LDB_RS04345 PF02833 DHHA2 domain LDB_RS04355 PF01070 FMN-dependent dehydrogenase LDB_RS04360 PF00288 GHMP kinases N terminal domain LDB_RS04360 PF08544 GHMP kinases C terminal LDB_RS04370 PF08544 GHMP kinases C terminal LDB_RS04370 PF00288 GHMP kinases N terminal domain LDB_RS04375 PF12705 PD-(D/E)XK nuclease superfamily LDB_RS04380 PF12705 PD-(D/E)XK nuclease superfamily LDB_RS04380 PF13361 UvrD-like helicase C-terminal domain LDB_RS04380 PF00580 UvrD/REP helicase N-terminal domain LDB_RS04385 PF13307 Helicase C-terminal domain LDB_RS04385 PF00929 Exonuclease LDB_RS04385 PF04851 Type III restriction enzyme, res subunit LDB_RS04395 PF01336 OB-fold nucleic acid binding domain LDB_RS04395 PF00152 tRNA synthetases class II (D, K and N) LDB_RS04400 PF07261 Replication initiation and membrane attachment LDB_RS04405 PF00730 HhH-GPD superfamily base excision DNA repair protein LDB_RS04405 PF00633 Helix-hairpin-helix motif LDB_RS04405 PF10576 Iron-sulfur binding domain of endonuclease III LDB_RS04425 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDB_RS04425 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDB_RS04430 PF00326 Prolyl oligopeptidase family LDB_RS04430 PF07676 WD40-like Beta Propeller Repeat LDB_RS04435 PF00912 Transglycosylase LDB_RS04435 PF00905 Penicillin binding protein transpeptidase domain LDB_RS04440 PF03838 Recombination protein U LDB_RS04445 PF06908 YspA SLOG family LDB_RS04450 PF05103 DivIVA protein LDB_RS04455 PF02926 THUMP domain LDB_RS04455 PF01170 Putative RNA methylase family UPF0020 LDB_RS04470 PF01268 Formate--tetrahydrofolate ligase LDB_RS04475 PF01252 Signal peptidase (SPase) II LDB_RS04480 PF00849 RNA pseudouridylate synthase LDB_RS04480 PF01479 S4 domain LDB_RS04485 PF00117 Glutamine amidotransferase class-I LDB_RS04485 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LDB_RS04490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDB_RS04490 PF02142 MGS-like domain LDB_RS04490 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LDB_RS04500 PF05167 Uncharacterised ACR (DUF711) LDB_RS04505 PF05670 NFACT protein RNA binding domain LDB_RS04520 PF00892 EamA-like transporter family LDB_RS04535 PF00300 Histidine phosphatase superfamily (branch 1) LDB_RS04555 PF13495 Phage integrase, N-terminal SAM-like domain LDB_RS04555 PF00589 Phage integrase family LDB_RS04560 PF02595 Glycerate kinase family LDB_RS04585 PF12008 Type I restriction and modification enzyme - subunit R C terminal LDB_RS04585 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LDB_RS04585 PF18766 SWI2/SNF2 ATPase LDB_RS04590 PF12161 HsdM N-terminal domain LDB_RS04590 PF02384 N-6 DNA Methylase LDB_RS04600 PF00589 Phage integrase family LDB_RS04600 PF02899 Phage integrase, N-terminal SAM-like domain LDB_RS04610 PF03466 LysR substrate binding domain LDB_RS04610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB_RS04620 PF01987 Mitochondrial biogenesis AIM24 LDB_RS04625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDB_RS04640 PF00005 ABC transporter LDB_RS04640 PF00664 ABC transporter transmembrane region LDB_RS04650 PF00117 Glutamine amidotransferase class-I LDB_RS04650 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LDB_RS04685 PF00589 Phage integrase family LDB_RS04710 PF01451 Low molecular weight phosphotyrosine protein phosphatase LDB_RS04720 PF00005 ABC transporter LDB_RS04755 PF13302 Acetyltransferase (GNAT) domain LDB_RS04765 PF00155 Aminotransferase class I and II LDB_RS04770 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LDB_RS04780 PF13302 Acetyltransferase (GNAT) domain LDB_RS04815 PF00005 ABC transporter LDB_RS04825 PF01451 Low molecular weight phosphotyrosine protein phosphatase LDB_RS04850 PF00589 Phage integrase family LDB_RS04885 PF00117 Glutamine amidotransferase class-I LDB_RS04885 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LDB_RS04895 PF00005 ABC transporter LDB_RS04895 PF00664 ABC transporter transmembrane region LDB_RS04920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDB_RS04920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDB_RS04930 PF00664 ABC transporter transmembrane region LDB_RS04930 PF00005 ABC transporter LDB_RS04935 PF00664 ABC transporter transmembrane region LDB_RS04935 PF00005 ABC transporter LDB_RS04940 PF00581 Rhodanese-like domain LDB_RS04945 PF00075 RNase H LDB_RS04960 PF00075 RNase H LDB_RS04975 PF13419 Haloacid dehalogenase-like hydrolase LDB_RS04985 PF14579 Helix-hairpin-helix motif LDB_RS04985 PF02811 PHP domain LDB_RS04985 PF00929 Exonuclease LDB_RS04985 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LDB_RS04985 PF07733 Bacterial DNA polymerase III alpha NTPase domain LDB_RS04985 PF11490 DNA polymerase III polC-type N-terminus II LDB_RS04995 PF02698 DUF218 domain LDB_RS05005 PF04205 FMN-binding domain LDB_RS05005 PF00890 FAD binding domain LDB_RS05025 PF17676 LD-carboxypeptidase C-terminal domain LDB_RS05025 PF02016 LD-carboxypeptidase N-terminal domain LDB_RS05030 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF LDB_RS05030 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF LDB_RS05030 PF01189 16S rRNA methyltransferase RsmB/F LDB_RS05050 PF01470 Pyroglutamyl peptidase LDB_RS05055 PF13367 PrsW family intramembrane metalloprotease LDB_RS05065 PF00171 Aldehyde dehydrogenase family LDB_RS05070 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS05075 PF00005 ABC transporter LDB_RS05075 PF00571 CBS domain LDB_RS05080 PF02082 Transcriptional regulator LDB_RS05090 PF01435 Peptidase family M48 LDB_RS05100 PF00155 Aminotransferase class I and II LDB_RS05105 PF00082 Subtilase family LDB_RS05105 PF02225 PA domain LDB_RS05105 PF00746 LPXTG cell wall anchor motif LDB_RS05105 PF06280 Fn3-like domain LDB_RS05110 PF01047 MarR family LDB_RS05110 PF00583 Acetyltransferase (GNAT) family LDB_RS05120 PF09335 SNARE associated Golgi protein LDB_RS05125 PF03590 Aspartate-ammonia ligase LDB_RS05130 PF01336 OB-fold nucleic acid binding domain LDB_RS05130 PF00152 tRNA synthetases class II (D, K and N) LDB_RS05145 PF16353 Domain of unknown function(DUF4981) LDB_RS05145 PF00703 Glycosyl hydrolases family 2 LDB_RS05145 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LDB_RS05145 PF02929 Beta galactosidase small chain LDB_RS05145 PF02837 Glycosyl hydrolases family 2, sugar binding domain LDB_RS05150 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LDB_RS05175 PF14602 Hexapeptide repeat of succinyl-transferase LDB_RS05175 PF12464 Maltose acetyltransferase LDB_RS05190 PF10502 Signal peptidase, peptidase S26 LDB_RS05200 PF01546 Peptidase family M20/M25/M40 LDB_RS05200 PF07687 Peptidase dimerisation domain LDB_RS05205 PF01784 NIF3 (NGG1p interacting factor 3) LDB_RS05210 PF04816 tRNA (adenine(22)-N(1))-methyltransferase LDB_RS05225 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LDB_RS05225 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LDB_RS05250 PF01555 DNA methylase LDB_RS05250 PF18273 Type III R-M EcoP15I C-terminal domain LDB_RS05295 PF00232 Glycosyl hydrolase family 1 LDB_RS05300 PF03979 Sigma-70 factor, region 1.1 LDB_RS05300 PF00140 Sigma-70 factor, region 1.2 LDB_RS05300 PF04542 Sigma-70 region 2 LDB_RS05300 PF04539 Sigma-70 region 3 LDB_RS05300 PF04545 Sigma-70, region 4 LDB_RS05305 PF03979 Sigma-70 factor, region 1.1 LDB_RS05305 PF00140 Sigma-70 factor, region 1.2 LDB_RS05305 PF04539 Sigma-70 region 3 LDB_RS05305 PF04545 Sigma-70, region 4 LDB_RS05305 PF04542 Sigma-70 region 2 LDB_RS05310 PF01807 CHC2 zinc finger LDB_RS05310 PF08275 DNA primase catalytic core, N-terminal domain LDB_RS05310 PF10410 DnaB-helicase binding domain of primase LDB_RS05315 PF02092 Glycyl-tRNA synthetase beta subunit LDB_RS05320 PF02091 Glycyl-tRNA synthetase alpha subunit LDB_RS05325 PF02565 Recombination protein O C terminal LDB_RS05325 PF11967 Recombination protein O N terminal LDB_RS05330 PF01926 50S ribosome-binding GTPase LDB_RS05330 PF07650 KH domain LDB_RS05335 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LDB_RS05340 PF02130 Uncharacterized protein family UPF0054 LDB_RS05345 PF02562 PhoH-like protein LDB_RS05350 PF03618 Kinase/pyrophosphorylase LDB_RS05360 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LDB_RS05360 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LDB_RS05375 PF00344 SecY translocase LDB_RS05380 PF00155 Aminotransferase class I and II LDB_RS05385 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LDB_RS05385 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LDB_RS05410 PF10431 C-terminal, D2-small domain, of ClpB protein LDB_RS05410 PF07724 AAA domain (Cdc48 subfamily) LDB_RS05415 PF00227 Proteasome subunit LDB_RS05420 PF00589 Phage integrase family LDB_RS05420 PF02899 Phage integrase, N-terminal SAM-like domain LDB_RS05425 PF01134 Glucose inhibited division protein A LDB_RS05430 PF01396 Topoisomerase DNA binding C4 zinc finger LDB_RS05430 PF01131 DNA topoisomerase LDB_RS05430 PF01751 Toprim domain LDB_RS05435 PF18255 DNA processing protein A sterile alpha motif domain LDB_RS05435 PF02481 DNA recombination-mediator protein A LDB_RS05440 PF01351 Ribonuclease HII LDB_RS05445 PF01926 50S ribosome-binding GTPase LDB_RS05450 PF06855 YozE SAM-like fold LDB_RS05455 PF02645 Uncharacterised protein, DegV family COG1307 LDB_RS05460 PF03006 Haemolysin-III related LDB_RS05465 PF12627 Probable RNA and SrmB- binding site of polymerase A LDB_RS05465 PF13735 tRNA nucleotidyltransferase domain 2 putative LDB_RS05465 PF01743 Poly A polymerase head domain LDB_RS05470 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LDB_RS05470 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LDB_RS05495 PF00005 ABC transporter LDB_RS05495 PF00664 ABC transporter transmembrane region LDB_RS05500 PF00005 ABC transporter LDB_RS05500 PF00664 ABC transporter transmembrane region LDB_RS05505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB_RS05505 PF03466 LysR substrate binding domain LDB_RS05520 PF02645 Uncharacterised protein, DegV family COG1307 LDB_RS05525 PF03952 Enolase, N-terminal domain LDB_RS05525 PF00113 Enolase, C-terminal TIM barrel domain LDB_RS05545 PF00005 ABC transporter LDB_RS05550 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS05555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB_RS05555 PF03466 LysR substrate binding domain LDB_RS05560 PF00403 Heavy-metal-associated domain LDB_RS05570 PF01594 AI-2E family transporter LDB_RS05575 PF01063 Amino-transferase class IV LDB_RS05580 PF01545 Cation efflux family LDB_RS05585 PF01022 Bacterial regulatory protein, arsR family LDB_RS05590 PF00156 Phosphoribosyl transferase domain LDB_RS05595 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LDB_RS05595 PF01368 DHH family LDB_RS05595 PF17768 RecJ OB domain LDB_RS05595 PF02272 DHHA1 domain LDB_RS05600 PF04203 Sortase domain LDB_RS05605 PF03144 Elongation factor Tu domain 2 LDB_RS05605 PF06421 GTP-binding protein LepA C-terminus LDB_RS05605 PF14492 Elongation Factor G, domain II LDB_RS05605 PF00679 Elongation factor G C-terminus LDB_RS05605 PF00009 Elongation factor Tu GTP binding domain LDB_RS05610 PF01556 DnaJ C terminal domain LDB_RS05610 PF00684 DnaJ central domain LDB_RS05610 PF00226 DnaJ domain LDB_RS05615 PF00012 Hsp70 protein LDB_RS05620 PF01025 GrpE LDB_RS05625 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LDB_RS05625 PF01628 HrcA protein C terminal domain LDB_RS05630 PF01687 Riboflavin kinase LDB_RS05630 PF06574 FAD synthetase LDB_RS05635 PF00589 Phage integrase family LDB_RS05635 PF14659 Phage integrase, N-terminal SAM-like domain LDB_RS05660 PF00291 Pyridoxal-phosphate dependent enzyme LDB_RS05665 PF01053 Cys/Met metabolism PLP-dependent enzyme LDB_RS05670 PF00132 Bacterial transferase hexapeptide (six repeats) LDB_RS05685 PF16198 tRNA pseudouridylate synthase B C-terminal domain LDB_RS05685 PF01509 TruB family pseudouridylate synthase (N terminal domain) LDB_RS05690 PF02033 Ribosome-binding factor A LDB_RS05695 PF04760 Translation initiation factor IF-2, N-terminal region LDB_RS05695 PF11987 Translation-initiation factor 2 LDB_RS05695 PF00009 Elongation factor Tu GTP binding domain LDB_RS05700 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LDB_RS05705 PF04296 Protein of unknown function (DUF448) LDB_RS05710 PF13184 NusA-like KH domain LDB_RS05710 PF08529 NusA N-terminal domain LDB_RS05710 PF00575 S1 RNA binding domain LDB_RS05715 PF17384 RimP C-terminal SH3 domain LDB_RS05715 PF02576 RimP N-terminal domain LDB_RS05720 PF11490 DNA polymerase III polC-type N-terminus II LDB_RS05720 PF14480 DNA polymerase III polC-type N-terminus I LDB_RS05720 PF00929 Exonuclease LDB_RS05720 PF02811 PHP domain LDB_RS05720 PF14579 Helix-hairpin-helix motif LDB_RS05720 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LDB_RS05720 PF07733 Bacterial DNA polymerase III alpha NTPase domain LDB_RS05720 PF01336 OB-fold nucleic acid binding domain LDB_RS05725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDB_RS05725 PF04073 Aminoacyl-tRNA editing domain LDB_RS05725 PF03129 Anticodon binding domain LDB_RS05730 PF17820 PDZ domain LDB_RS05730 PF02163 Peptidase family M50 LDB_RS05740 PF01255 Putative undecaprenyl diphosphate synthase LDB_RS05745 PF01765 Ribosome recycling factor LDB_RS05750 PF00696 Amino acid kinase family LDB_RS05755 PF00889 Elongation factor TS LDB_RS05760 PF00318 Ribosomal protein S2 LDB_RS05765 PF01541 GIY-YIG catalytic domain LDB_RS05770 PF01553 Acyltransferase LDB_RS05775 PF02774 Semialdehyde dehydrogenase, dimerisation domain LDB_RS05775 PF01118 Semialdehyde dehydrogenase, NAD binding domain LDB_RS05780 PF00696 Amino acid kinase family LDB_RS05780 PF13840 ACT domain LDB_RS05785 PF03447 Homoserine dehydrogenase, NAD binding domain LDB_RS05785 PF00742 Homoserine dehydrogenase LDB_RS05785 PF01842 ACT domain LDB_RS05795 PF00005 ABC transporter LDB_RS05795 PF00664 ABC transporter transmembrane region LDB_RS05800 PF00005 ABC transporter LDB_RS05800 PF00664 ABC transporter transmembrane region LDB_RS05805 PF03672 Uncharacterised protein family (UPF0154) LDB_RS05810 PF05979 Bacterial protein of unknown function (DUF896) LDB_RS05815 PF01726 LexA DNA binding domain LDB_RS05815 PF00717 Peptidase S24-like LDB_RS05820 PF06800 Sugar transport protein LDB_RS05825 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDB_RS05835 PF00270 DEAD/DEAH box helicase LDB_RS05835 PF09369 Domain of unknown function (DUF1998) LDB_RS05835 PF00271 Helicase conserved C-terminal domain LDB_RS05850 PF00149 Calcineurin-like phosphoesterase LDB_RS05850 PF02872 5'-nucleotidase, C-terminal domain LDB_RS05850 PF17936 Bacterial Ig domain LDB_RS05855 PF01245 Ribosomal protein L19 LDB_RS05875 PF01746 tRNA (Guanine-1)-methyltransferase LDB_RS05880 PF01782 RimM N-terminal domain LDB_RS05880 PF05239 PRC-barrel domain LDB_RS05885 PF00886 Ribosomal protein S16 LDB_RS05890 PF00448 SRP54-type protein, GTPase domain LDB_RS05890 PF02978 Signal peptide binding domain LDB_RS05890 PF02881 SRP54-type protein, helical bundle domain LDB_RS05895 PF04297 Putative helix-turn-helix protein, YlxM / p13 like LDB_RS05905 PF03577 Peptidase family C69 LDB_RS05910 PF03577 Peptidase family C69 LDB_RS05915 PF00448 SRP54-type protein, GTPase domain LDB_RS05915 PF02881 SRP54-type protein, helical bundle domain LDB_RS05920 PF06470 SMC proteins Flexible Hinge Domain LDB_RS05920 PF02463 RecF/RecN/SMC N terminal domain LDB_RS05925 PF00035 Double-stranded RNA binding motif LDB_RS05925 PF14622 Ribonuclease-III-like LDB_RS05930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDB_RS05935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDB_RS05940 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS05945 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS05950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDB_RS05950 PF00005 ABC transporter LDB_RS05955 PF00005 ABC transporter LDB_RS05955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDB_RS05960 PF00550 Phosphopantetheine attachment site LDB_RS05965 PF02504 Fatty acid synthesis protein LDB_RS05970 PF00270 DEAD/DEAH box helicase LDB_RS05970 PF00271 Helicase conserved C-terminal domain LDB_RS05970 PF17191 RecG wedge domain LDB_RS05975 PF02734 DAK2 domain LDB_RS05975 PF13684 Dihydroxyacetone kinase family LDB_RS05980 PF03780 Asp23 family, cell envelope-related function LDB_RS05985 PF13936 Helix-turn-helix domain LDB_RS06010 PF00589 Phage integrase family LDB_RS06010 PF14659 Phage integrase, N-terminal SAM-like domain LDB_RS06040 PF16745 RsgA N-terminal domain LDB_RS06040 PF03193 RsgA GTPase LDB_RS06045 PF03793 PASTA domain LDB_RS06045 PF00069 Protein kinase domain LDB_RS06055 PF01029 NusB family LDB_RS06055 PF01189 16S rRNA methyltransferase RsmB/F LDB_RS06060 PF00551 Formyl transferase LDB_RS06060 PF02911 Formyl transferase, C-terminal domain LDB_RS06065 PF00271 Helicase conserved C-terminal domain LDB_RS06065 PF04851 Type III restriction enzyme, res subunit LDB_RS06065 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LDB_RS06065 PF17764 3′ DNA-binding domain (3′BD) LDB_RS06065 PF18074 Primosomal protein N C-terminal domain LDB_RS06070 PF01192 RNA polymerase Rpb6 LDB_RS06075 PF00625 Guanylate kinase LDB_RS06095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDB_RS06100 PF13476 AAA domain LDB_RS06105 PF01728 FtsJ-like methyltransferase LDB_RS06105 PF01479 S4 domain LDB_RS06110 PF00348 Polyprenyl synthetase LDB_RS06115 PF02609 Exonuclease VII small subunit LDB_RS06120 PF13742 OB-fold nucleic acid binding domain LDB_RS06120 PF02601 Exonuclease VII, large subunit LDB_RS06125 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LDB_RS06125 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LDB_RS06130 PF01029 NusB family LDB_RS06135 PF03780 Asp23 family, cell envelope-related function LDB_RS06140 PF09285 Elongation factor P, C-terminal LDB_RS06140 PF08207 Elongation factor P (EF-P) KOW-like domain LDB_RS06140 PF01132 Elongation factor P (EF-P) OB domain LDB_RS06145 PF00557 Metallopeptidase family M24 LDB_RS06145 PF01321 Creatinase/Prolidase N-terminal domain LDB_RS06150 PF01016 Ribosomal L27 protein LDB_RS06155 PF00829 Ribosomal prokaryotic L21 protein LDB_RS06170 PF00005 ABC transporter LDB_RS06175 PF02844 Phosphoribosylglycinamide synthetase, N domain LDB_RS06175 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LDB_RS06175 PF02843 Phosphoribosylglycinamide synthetase, C domain LDB_RS06180 PF02142 MGS-like domain LDB_RS06180 PF01808 AICARFT/IMPCHase bienzyme LDB_RS06185 PF00551 Formyl transferase LDB_RS06190 PF02769 AIR synthase related protein, C-terminal domain LDB_RS06190 PF00586 AIR synthase related protein, N-terminal domain LDB_RS06195 PF00156 Phosphoribosyl transferase domain LDB_RS06195 PF13537 Glutamine amidotransferase domain LDB_RS06200 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LDB_RS06200 PF02769 AIR synthase related protein, C-terminal domain LDB_RS06200 PF00586 AIR synthase related protein, N-terminal domain LDB_RS06210 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LDB_RS06215 PF01259 SAICAR synthetase LDB_RS06220 PF00206 Lyase LDB_RS06220 PF10397 Adenylosuccinate lyase C-terminus LDB_RS06225 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LDB_RS06225 PF02222 ATP-grasp domain LDB_RS06230 PF00731 AIR carboxylase LDB_RS06270 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LDB_RS06270 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal LDB_RS06270 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LDB_RS06275 PF07690 Major Facilitator Superfamily LDB_RS06280 PF04204 Homoserine O-succinyltransferase LDB_RS06285 PF00291 Pyridoxal-phosphate dependent enzyme LDB_RS06300 PF01431 Peptidase family M13 LDB_RS06300 PF05649 Peptidase family M13 LDB_RS06305 PF00962 Adenosine/AMP deaminase LDB_RS06340 PF03951 Glutamine synthetase, beta-Grasp domain LDB_RS06340 PF00120 Glutamine synthetase, catalytic domain LDB_RS06355 PF00581 Rhodanese-like domain LDB_RS06375 PF00905 Penicillin binding protein transpeptidase domain LDB_RS06375 PF03717 Penicillin-binding Protein dimerisation domain LDB_RS06385 PF03449 Transcription elongation factor, N-terminal LDB_RS06385 PF01272 Transcription elongation factor, GreA/GreB, C-term LDB_RS06390 PF03147 Ferredoxin-fold anticodon binding domain LDB_RS06390 PF03484 tRNA synthetase B5 domain LDB_RS06390 PF03483 B3/4 domain LDB_RS06390 PF01588 Putative tRNA binding domain LDB_RS06390 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LDB_RS06395 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LDB_RS06395 PF01409 tRNA synthetases class II core domain (F) LDB_RS06400 PF01638 HxlR-like helix-turn-helix LDB_RS06405 PF00588 SpoU rRNA Methylase family LDB_RS06405 PF08032 RNA 2'-O ribose methyltransferase substrate binding LDB_RS06410 PF00708 Acylphosphatase LDB_RS06415 PF02096 60Kd inner membrane protein LDB_RS06420 PF00512 His Kinase A (phospho-acceptor) domain LDB_RS06420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB_RS06420 PF18719 ArlS sensor domain LDB_RS06425 PF00486 Transcriptional regulatory protein, C terminal LDB_RS06425 PF00072 Response regulator receiver domain LDB_RS06435 PF05636 HIGH Nucleotidyl Transferase LDB_RS06450 PF01467 Cytidylyltransferase-like LDB_RS06455 PF01926 50S ribosome-binding GTPase LDB_RS06460 PF00453 Ribosomal protein L20 LDB_RS06465 PF01632 Ribosomal protein L35 LDB_RS06470 PF00707 Translation initiation factor IF-3, C-terminal domain LDB_RS06470 PF05198 Translation initiation factor IF-3, N-terminal domain LDB_RS06495 PF03129 Anticodon binding domain LDB_RS06495 PF02824 TGS domain LDB_RS06495 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDB_RS06495 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LDB_RS06500 PF07319 Primosomal protein DnaI N-terminus LDB_RS06500 PF01695 IstB-like ATP binding protein LDB_RS06510 PF03477 ATP cone domain LDB_RS06515 PF01121 Dephospho-CoA kinase LDB_RS06520 PF06827 Zinc finger found in FPG and IleRS LDB_RS06520 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LDB_RS06520 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LDB_RS06525 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LDB_RS06525 PF00476 DNA polymerase family A LDB_RS06525 PF01367 5'-3' exonuclease, C-terminal SAM fold LDB_RS06535 PF07690 Major Facilitator Superfamily LDB_RS06540 PF07690 Major Facilitator Superfamily LDB_RS06560 PF12833 Helix-turn-helix domain LDB_RS06560 PF02311 AraC-like ligand binding domain LDB_RS06565 PF01225 Mur ligase family, catalytic domain LDB_RS06565 PF08245 Mur ligase middle domain LDB_RS06565 PF02875 Mur ligase family, glutamate ligase domain LDB_RS06570 PF01588 Putative tRNA binding domain LDB_RS06570 PF14794 Domain of unknown function (DUF4479) LDB_RS06575 PF00085 Thioredoxin LDB_RS06580 PF02390 Putative methyltransferase LDB_RS06590 PF00005 ABC transporter LDB_RS06595 PF01230 HIT domain LDB_RS06605 PF01180 Dihydroorotate dehydrogenase LDB_RS06610 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LDB_RS06615 PF00156 Phosphoribosyl transferase domain LDB_RS06625 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LDB_RS06630 PF01202 Shikimate kinase LDB_RS06640 PF13514 AAA domain LDB_RS06645 PF00149 Calcineurin-like phosphoesterase LDB_RS06650 PF06133 Control of competence regulator ComK, YlbF/YmcA LDB_RS06655 PF00912 Transglycosylase LDB_RS06655 PF00905 Penicillin binding protein transpeptidase domain LDB_RS06660 PF00849 RNA pseudouridylate synthase LDB_RS06660 PF01479 S4 domain LDB_RS06665 PF01116 Fructose-bisphosphate aldolase class-II LDB_RS06705 PF01256 Carbohydrate kinase LDB_RS06710 PF07943 Penicillin-binding protein 5, C-terminal domain LDB_RS06710 PF00768 D-alanyl-D-alanine carboxypeptidase LDB_RS06730 PF00391 PEP-utilising enzyme, mobile domain LDB_RS06730 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LDB_RS06730 PF02896 PEP-utilising enzyme, TIM barrel domain LDB_RS06735 PF00391 PEP-utilising enzyme, mobile domain LDB_RS06735 PF02896 PEP-utilising enzyme, TIM barrel domain LDB_RS06735 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LDB_RS06745 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LDB_RS06745 PF00391 PEP-utilising enzyme, mobile domain LDB_RS06745 PF02896 PEP-utilising enzyme, TIM barrel domain LDB_RS06750 PF01943 Polysaccharide biosynthesis protein LDB_RS06750 PF14667 Polysaccharide biosynthesis C-terminal domain LDB_RS06755 PF08264 Anticodon-binding domain of tRNA LDB_RS06755 PF13603 Leucyl-tRNA synthetase, Domain 2 LDB_RS06755 PF00133 tRNA synthetases class I (I, L, M and V) LDB_RS06755 PF09334 tRNA synthetases class I (M) LDB_RS06765 PF01569 PAP2 superfamily LDB_RS06770 PF07690 Major Facilitator Superfamily LDB_RS06775 PF00438 S-adenosylmethionine synthetase, N-terminal domain LDB_RS06775 PF02772 S-adenosylmethionine synthetase, central domain LDB_RS06775 PF02773 S-adenosylmethionine synthetase, C-terminal domain LDB_RS06835 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDB_RS06840 PF09335 SNARE associated Golgi protein LDB_RS06850 PF13344 Haloacid dehalogenase-like hydrolase LDB_RS06860 PF02872 5'-nucleotidase, C-terminal domain LDB_RS06870 PF00356 Bacterial regulatory proteins, lacI family LDB_RS06875 PF00557 Metallopeptidase family M24 LDB_RS06875 PF01321 Creatinase/Prolidase N-terminal domain LDB_RS06885 PF01321 Creatinase/Prolidase N-terminal domain LDB_RS06885 PF00557 Metallopeptidase family M24 LDB_RS06900 PF00924 Mechanosensitive ion channel LDB_RS06905 PF01725 Ham1 family LDB_RS06915 PF00085 Thioredoxin LDB_RS06920 PF00488 MutS domain V LDB_RS06920 PF01713 Smr domain LDB_RS06925 PF06949 Protein of unknown function (DUF1292) LDB_RS06930 PF03652 Holliday junction resolvase LDB_RS06935 PF06135 IreB regulatory phosphoprotein LDB_RS06940 PF01411 tRNA synthetases class II (A) LDB_RS06940 PF02272 DHHA1 domain LDB_RS06940 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LDB_RS06945 PF00270 DEAD/DEAH box helicase LDB_RS06945 PF00271 Helicase conserved C-terminal domain LDB_RS06950 PF02272 DHHA1 domain LDB_RS06950 PF01368 DHH family LDB_RS06955 PF00817 impB/mucB/samB family LDB_RS06955 PF11799 impB/mucB/samB family C-terminal domain LDB_RS06960 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LDB_RS06960 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LDB_RS06970 PF05496 Holliday junction DNA helicase RuvB P-loop domain LDB_RS06970 PF05491 RuvB C-terminal winged helix domain LDB_RS06970 PF17864 RuvB AAA lid domain LDB_RS06975 PF07499 RuvA, C-terminal domain LDB_RS06975 PF01330 RuvA N terminal domain LDB_RS06980 PF01119 DNA mismatch repair protein, C-terminal domain LDB_RS06980 PF08676 MutL C terminal dimerisation domain LDB_RS06985 PF05188 MutS domain II LDB_RS06985 PF01624 MutS domain I LDB_RS06985 PF05192 MutS domain III LDB_RS06985 PF05190 MutS family domain IV LDB_RS06985 PF00488 MutS domain V LDB_RS06990 PF00118 TCP-1/cpn60 chaperonin family LDB_RS06995 PF00166 Chaperonin 10 Kd subunit LDB_RS07000 PF02629 CoA binding domain LDB_RS07000 PF06971 Putative DNA-binding protein N-terminus LDB_RS07005 PF00005 ABC transporter LDB_RS07005 PF16326 ABC transporter C-terminal domain LDB_RS07005 PF12848 ABC transporter LDB_RS07010 PF00814 Glycoprotease family LDB_RS07020 PF00814 Glycoprotease family LDB_RS07030 PF12822 ECF transporter, substrate-specific component LDB_RS07040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LDB_RS07045 PF06156 Initiation control protein YabA LDB_RS07050 PF09115 DNA polymerase III, delta subunit, C terminal LDB_RS07055 PF06153 Cyclic-di-AMP receptor LDB_RS07060 PF02223 Thymidylate kinase LDB_RS07070 PF02132 RecR protein LDB_RS07070 PF13662 Toprim domain LDB_RS07075 PF02575 YbaB/EbfC DNA-binding family LDB_RS07080 PF12169 DNA polymerase III subunits gamma and tau domain III LDB_RS07085 PF14437 MafB19-like deaminase LDB_RS07090 PF05175 Methyltransferase small domain LDB_RS07095 PF00156 Phosphoribosyl transferase domain LDB_RS07110 PF01527 Transposase LDB_RS07120 PF11954 Domain of unknown function (DUF3471) LDB_RS07120 PF00144 Beta-lactamase LDB_RS07125 PF00216 Bacterial DNA-binding protein LDB_RS07155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDB_RS07160 PF00542 Ribosomal protein L7/L12 C-terminal domain LDB_RS07160 PF16320 Ribosomal protein L7/L12 dimerisation domain LDB_RS07165 PF00466 Ribosomal protein L10 LDB_RS07180 PF00909 Ammonium Transporter Family LDB_RS07185 PF00535 Glycosyl transferase family 2 LDB_RS07190 PF00687 Ribosomal protein L1p/L10e family LDB_RS07195 PF03946 Ribosomal protein L11, N-terminal domain LDB_RS07195 PF00298 Ribosomal protein L11, RNA binding domain LDB_RS07200 PF02357 Transcription termination factor nusG LDB_RS07200 PF00467 KOW motif LDB_RS07210 PF00471 Ribosomal protein L33 LDB_RS07215 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LDB_RS07215 PF02780 Transketolase, C-terminal domain LDB_RS07215 PF02779 Transketolase, pyrimidine binding domain LDB_RS07220 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LDB_RS07220 PF02779 Transketolase, pyrimidine binding domain LDB_RS07220 PF02780 Transketolase, C-terminal domain LDB_RS07225 PF02779 Transketolase, pyrimidine binding domain LDB_RS07225 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LDB_RS07225 PF02780 Transketolase, C-terminal domain LDB_RS07230 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LDB_RS07230 PF02779 Transketolase, pyrimidine binding domain LDB_RS07230 PF02780 Transketolase, C-terminal domain LDB_RS07250 PF08032 RNA 2'-O ribose methyltransferase substrate binding LDB_RS07250 PF00588 SpoU rRNA Methylase family LDB_RS07255 PF00636 Ribonuclease III domain LDB_RS07260 PF01406 tRNA synthetases class I (C) catalytic domain LDB_RS07260 PF09190 DALR domain LDB_RS07275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB_RS07275 PF03466 LysR substrate binding domain LDB_RS07280 PF03601 Conserved hypothetical protein 698 LDB_RS07285 PF00749 tRNA synthetases class I (E and Q), catalytic domain LDB_RS07300 PF00392 Bacterial regulatory proteins, gntR family LDB_RS07305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDB_RS07310 PF00293 NUDIX domain LDB_RS07340 PF00294 pfkB family carbohydrate kinase LDB_RS07345 PF07690 Major Facilitator Superfamily LDB_RS07350 PF00557 Metallopeptidase family M24 LDB_RS07350 PF01321 Creatinase/Prolidase N-terminal domain LDB_RS07385 PF00465 Iron-containing alcohol dehydrogenase LDB_RS07385 PF00171 Aldehyde dehydrogenase family LDB_RS07395 PF00005 ABC transporter LDB_RS07395 PF12558 ATP-binding cassette cobalt transporter LDB_RS07400 PF07155 ECF-type riboflavin transporter, S component LDB_RS07405 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase LDB_RS07410 PF00324 Amino acid permease LDB_RS07420 PF00005 ABC transporter LDB_RS07475 PF00563 EAL domain LDB_RS07475 PF00990 Diguanylate cyclase, GGDEF domain LDB_RS07475 PF03707 Bacterial signalling protein N terminal repeat LDB_RS07485 PF01501 Glycosyl transferase family 8 LDB_RS07490 PF18073 Rubredoxin metal binding domain LDB_RS07495 PF00692 dUTPase LDB_RS07505 PF03051 Peptidase C1-like family LDB_RS07520 PF07977 FabA-like domain LDB_RS07525 PF00300 Histidine phosphatase superfamily (branch 1) LDB_RS07540 PF00300 Histidine phosphatase superfamily (branch 1) LDB_RS07560 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LDB_RS07560 PF13378 Enolase C-terminal domain-like LDB_RS07575 PF01418 Helix-turn-helix domain, rpiR family LDB_RS07575 PF01380 SIS domain LDB_RS07580 PF01546 Peptidase family M20/M25/M40 LDB_RS07595 PF00206 Lyase LDB_RS07595 PF10415 Fumarase C C-terminus LDB_RS07635 PF08544 GHMP kinases C terminal LDB_RS07635 PF00288 GHMP kinases N terminal domain LDB_RS07640 PF14821 Threonine synthase N terminus LDB_RS07640 PF00291 Pyridoxal-phosphate dependent enzyme LDB_RS07680 PF00356 Bacterial regulatory proteins, lacI family LDB_RS07690 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LDB_RS07690 PF00367 phosphotransferase system, EIIB LDB_RS07690 PF02378 Phosphotransferase system, EIIC LDB_RS07695 PF00365 Phosphofructokinase LDB_RS07700 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LDB_RS07700 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LDB_RS07700 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LDB_RS07700 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LDB_RS07705 PF00128 Alpha amylase, catalytic domain LDB_RS07705 PF02903 Alpha amylase, N-terminal ig-like domain LDB_RS07710 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LDB_RS07710 PF01276 Orn/Lys/Arg decarboxylase, major domain LDB_RS07710 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain LDB_RS07740 PF13936 Helix-turn-helix domain LDB_RS07755 PF07690 Major Facilitator Superfamily LDB_RS07780 PF01370 NAD dependent epimerase/dehydratase family LDB_RS07795 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain LDB_RS07795 PF00877 NlpC/P60 family LDB_RS07800 PF00324 Amino acid permease LDB_RS07815 PF03613 PTS system mannose/fructose/sorbose family IID component LDB_RS07820 PF03609 PTS system sorbose-specific iic component LDB_RS07825 PF03610 PTS system fructose IIA component LDB_RS07825 PF03830 PTS system sorbose subfamily IIB component LDB_RS07855 PF03553 Na+/H+ antiporter family LDB_RS07875 PF00005 ABC transporter LDB_RS07875 PF00664 ABC transporter transmembrane region LDB_RS07880 PF01458 Uncharacterized protein family (UPF0051) LDB_RS07885 PF01592 NifU-like N terminal domain LDB_RS07890 PF00266 Aminotransferase class-V LDB_RS07895 PF01458 Uncharacterized protein family (UPF0051) LDB_RS07900 PF00005 ABC transporter LDB_RS07910 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LDB_RS07920 PF02056 Family 4 glycosyl hydrolase LDB_RS07920 PF11975 Family 4 glycosyl hydrolase C-terminal domain LDB_RS07925 PF02687 FtsX-like permease family LDB_RS07925 PF12704 MacB-like periplasmic core domain LDB_RS07925 PF00005 ABC transporter LDB_RS07945 PF01668 SmpB protein LDB_RS07950 PF17876 Cold shock domain LDB_RS07950 PF08206 Ribonuclease B OB domain LDB_RS07950 PF00773 RNB domain LDB_RS07950 PF00575 S1 RNA binding domain LDB_RS07960 PF00884 Sulfatase LDB_RS07970 PF13439 Glycosyltransferase Family 4 LDB_RS07970 PF00534 Glycosyl transferases group 1 LDB_RS07975 PF13439 Glycosyltransferase Family 4 LDB_RS07975 PF00534 Glycosyl transferases group 1 LDB_RS08155 PF13739 Deacetylase PdaC LDB_RS08155 PF11738 Protein of unknown function (DUF3298) LDB_RS08165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDB_RS08165 PF02403 Seryl-tRNA synthetase N-terminal domain LDB_RS08175 PF09335 SNARE associated Golgi protein LDB_RS08195 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LDB_RS08195 PF00117 Glutamine amidotransferase class-I LDB_RS08200 PF13936 Helix-turn-helix domain LDB_RS08210 PF03176 MMPL family LDB_RS08235 PF00561 alpha/beta hydrolase fold LDB_RS08240 PF13673 Acetyltransferase (GNAT) domain LDB_RS08255 PF01223 DNA/RNA non-specific endonuclease LDB_RS08260 PF00248 Aldo/keto reductase family LDB_RS08280 PF00005 ABC transporter LDB_RS08280 PF00664 ABC transporter transmembrane region LDB_RS08285 PF13936 Helix-turn-helix domain LDB_RS08295 PF00561 alpha/beta hydrolase fold LDB_RS08305 PF01132 Elongation factor P (EF-P) OB domain LDB_RS08305 PF08207 Elongation factor P (EF-P) KOW-like domain LDB_RS08305 PF09285 Elongation factor P, C-terminal LDB_RS08310 PF00485 Phosphoribulokinase / Uridine kinase family LDB_RS08335 PF00005 ABC transporter LDB_RS08340 PF13538 UvrD-like helicase C-terminal domain LDB_RS08360 PF03009 Glycerophosphoryl diester phosphodiesterase family LDB_RS08395 PF04138 GtrA-like protein LDB_RS08415 PF01467 Cytidylyltransferase-like LDB_RS08420 PF04991 LicD family LDB_RS08450 PF13439 Glycosyltransferase Family 4 LDB_RS08450 PF00534 Glycosyl transferases group 1 LDB_RS08455 PF00535 Glycosyl transferase family 2 LDB_RS08465 PF03275 UDP-galactopyranose mutase LDB_RS08475 PF02397 Bacterial sugar transferase LDB_RS08485 PF03816 Cell envelope-related transcriptional attenuator domain LDB_RS08520 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LDB_RS08520 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LDB_RS08545 PF13936 Helix-turn-helix domain LDB_RS08565 PF02653 Branched-chain amino acid transport system / permease component LDB_RS08570 PF00005 ABC transporter LDB_RS08575 PF01641 SelR domain LDB_RS08585 PF04321 RmlD substrate binding domain LDB_RS08590 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LDB_RS08620 PF00890 FAD binding domain LDB_RS08620 PF04205 FMN-binding domain LDB_RS08625 PF03466 LysR substrate binding domain LDB_RS08625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDB_RS08630 PF07693 KAP family P-loop domain LDB_RS08685 PF13005 zinc-finger binding domain of transposase IS66 LDB_RS08685 PF13007 Transposase C of IS166 homeodomain LDB_RS08685 PF13817 IS66 C-terminal element LDB_RS08685 PF03050 Transposase IS66 family LDB_RS08695 PF00534 Glycosyl transferases group 1 LDB_RS08705 PF01943 Polysaccharide biosynthesis protein LDB_RS08705 PF14667 Polysaccharide biosynthesis C-terminal domain LDB_RS08710 PF03275 UDP-galactopyranose mutase LDB_RS08730 PF04101 Glycosyltransferase family 28 C-terminal domain LDB_RS08730 PF03033 Glycosyltransferase family 28 N-terminal domain LDB_RS08735 PF02397 Bacterial sugar transferase LDB_RS08745 PF13614 AAA domain LDB_RS08750 PF02706 Chain length determinant protein LDB_RS08755 PF03816 Cell envelope-related transcriptional attenuator domain LDB_RS08760 PF16360 GTP-binding GTPase Middle Region LDB_RS08760 PF01926 50S ribosome-binding GTPase LDB_RS08760 PF13167 GTP-binding GTPase N-terminal LDB_RS08775 PF00877 NlpC/P60 family LDB_RS08775 PF01476 LysM domain LDB_RS08785 PF00877 NlpC/P60 family LDB_RS08790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDB_RS08790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDB_RS08795 PF00877 NlpC/P60 family LDB_RS08800 PF00625 Guanylate kinase LDB_RS08835 PF12848 ABC transporter LDB_RS08835 PF00005 ABC transporter LDB_RS08845 PF03816 Cell envelope-related transcriptional attenuator domain LDB_RS08850 PF07282 Putative transposase DNA-binding domain LDB_RS08850 PF12323 Helix-turn-helix domain LDB_RS08850 PF01385 Probable transposase LDB_RS08855 PF08439 Oligopeptidase F LDB_RS08855 PF01432 Peptidase family M3 LDB_RS08870 PF00950 ABC 3 transport family LDB_RS08875 PF00005 ABC transporter LDB_RS08885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LDB_RS08885 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LDB_RS08890 PF00294 pfkB family carbohydrate kinase LDB_RS08895 PF08220 DeoR-like helix-turn-helix domain LDB_RS08895 PF00455 DeoR C terminal sensor domain LDB_RS08900 PF01177 Asp/Glu/Hydantoin racemase LDB_RS08905 PF08245 Mur ligase middle domain LDB_RS08905 PF02875 Mur ligase family, glutamate ligase domain LDB_RS08910 PF00512 His Kinase A (phospho-acceptor) domain LDB_RS08910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDB_RS08915 PF00486 Transcriptional regulatory protein, C terminal LDB_RS08915 PF00072 Response regulator receiver domain LDB_RS08920 PF00005 ABC transporter LDB_RS08920 PF00664 ABC transporter transmembrane region LDB_RS08935 PF06071 Protein of unknown function (DUF933) LDB_RS08935 PF01926 50S ribosome-binding GTPase LDB_RS08940 PF06107 Bacterial protein of unknown function (DUF951) LDB_RS08945 PF02195 ParB-like nuclease domain LDB_RS08945 PF17762 HTH domain found in ParB protein LDB_RS08950 PF13614 AAA domain LDB_RS08955 PF02195 ParB-like nuclease domain LDB_RS08955 PF17762 HTH domain found in ParB protein LDB_RS08960 PF02527 rRNA small subunit methyltransferase G LDB_RS08970 PF02424 ApbE family LDB_RS08975 PF13350 Tyrosine phosphatase family LDB_RS08980 PF03358 NADPH-dependent FMN reductase LDB_RS08985 PF03358 NADPH-dependent FMN reductase LDB_RS08995 PF03577 Peptidase family C69 LDB_RS09005 PF02378 Phosphotransferase system, EIIC LDB_RS09005 PF00367 phosphotransferase system, EIIB LDB_RS09005 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LDB_RS09015 PF01243 Pyridoxamine 5'-phosphate oxidase LDB_RS09025 PF00005 ABC transporter LDB_RS09030 PF02687 FtsX-like permease family LDB_RS09040 PF01565 FAD binding domain LDB_RS09040 PF02913 FAD linked oxidases, C-terminal domain LDB_RS09050 PF03883 Peroxide stress protein YaaA LDB_RS09075 PF11838 ERAP1-like C-terminal domain LDB_RS09075 PF01433 Peptidase family M1 domain LDB_RS09090 PF03577 Peptidase family C69 LDB_RS09095 PF00939 Sodium:sulfate symporter transmembrane region LDB_RS09100 PF00206 Lyase LDB_RS09100 PF10415 Fumarase C C-terminus LDB_RS09130 PF01661 Macro domain LDB_RS09135 PF13350 Tyrosine phosphatase family LDB_RS09140 PF03412 Peptidase C39 family LDB_RS09140 PF00664 ABC transporter transmembrane region LDB_RS09140 PF00005 ABC transporter LDB_RS09145 PF00069 Protein kinase domain LDB_RS09150 PF13350 Tyrosine phosphatase family LDB_RS09160 PF07685 CobB/CobQ-like glutamine amidotransferase domain LDB_RS09170 PF17871 AAA lid domain LDB_RS09170 PF10431 C-terminal, D2-small domain, of ClpB protein LDB_RS09170 PF07724 AAA domain (Cdc48 subfamily) LDB_RS09170 PF00004 ATPase family associated with various cellular activities (AAA) LDB_RS09175 PF00990 Diguanylate cyclase, GGDEF domain LDB_RS09190 PF00117 Glutamine amidotransferase class-I LDB_RS09190 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LDB_RS09195 PF01979 Amidohydrolase family LDB_RS09200 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LDB_RS09200 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LDB_RS09205 PF00156 Phosphoribosyl transferase domain LDB_RS09210 PF01180 Dihydroorotate dehydrogenase LDB_RS09220 PF00313 'Cold-shock' DNA-binding domain LDB_RS09225 PF00239 Resolvase, N terminal domain LDB_RS09225 PF02796 Helix-turn-helix domain of resolvase LDB_RS09230 PF00892 EamA-like transporter family LDB_RS09235 PF07722 Peptidase C26 LDB_RS09270 PF00677 Lumazine binding domain LDB_RS09335 PF00440 Bacterial regulatory proteins, tetR family LDB_RS09335 PF16925 Tetracyclin repressor-like, C-terminal domain LDB_RS09340 PF00005 ABC transporter LDB_RS09340 PF02687 FtsX-like permease family LDB_RS09340 PF12704 MacB-like periplasmic core domain LDB_RS09355 PF04914 DltD protein LDB_RS09360 PF00550 Phosphopantetheine attachment site LDB_RS09365 PF03062 MBOAT, membrane-bound O-acyltransferase family LDB_RS09370 PF13193 AMP-binding enzyme C-terminal domain LDB_RS09370 PF00501 AMP-binding enzyme LDB_RS09405 PF00403 Heavy-metal-associated domain LDB_RS09410 PF00999 Sodium/hydrogen exchanger family LDB_RS09425 PF02608 ABC transporter substrate-binding protein PnrA-like LDB_RS09455 PF02608 ABC transporter substrate-binding protein PnrA-like LDB_RS09485 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS09490 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS09495 PF08402 TOBE domain LDB_RS09495 PF00005 ABC transporter LDB_RS09505 PF01979 Amidohydrolase family LDB_RS09505 PF13382 Adenine deaminase C-terminal domain LDB_RS09510 PF02608 ABC transporter substrate-binding protein PnrA-like LDB_RS09515 PF00005 ABC transporter LDB_RS09520 PF02653 Branched-chain amino acid transport system / permease component LDB_RS09525 PF02653 Branched-chain amino acid transport system / permease component LDB_RS09540 PF00248 Aldo/keto reductase family LDB_RS09545 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LDB_RS09570 PF01471 Putative peptidoglycan binding domain LDB_RS09570 PF08924 Domain of unknown function (DUF1906) LDB_RS09580 PF01712 Deoxynucleoside kinase LDB_RS09585 PF01712 Deoxynucleoside kinase LDB_RS09590 PF00528 Binding-protein-dependent transport system inner membrane component LDB_RS09595 PF00005 ABC transporter LDB_RS09600 PF00860 Permease family LDB_RS09605 PF00654 Voltage gated chloride channel LDB_RS09640 PF00005 ABC transporter LDB_RS09665 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LDB_RS09665 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LDB_RS09670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LDB_RS09670 PF00205 Thiamine pyrophosphate enzyme, central domain LDB_RS09670 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LDB_RS09675 PF01134 Glucose inhibited division protein A LDB_RS09675 PF13932 GidA associated domain LDB_RS09680 PF01926 50S ribosome-binding GTPase LDB_RS09680 PF12631 MnmE helical domain LDB_RS09680 PF10396 GTP-binding protein TrmE N-terminus LDB_RS09685 PF02096 60Kd inner membrane protein LDB_RS09690 PF00825 Ribonuclease P