LS838_RS00005 PF00308 Bacterial dnaA protein LS838_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix LS838_RS00005 PF11638 DnaA N-terminal domain LS838_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LS838_RS00010 PF02767 DNA polymerase III beta subunit, central domain LS838_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LS838_RS00015 PF13275 S4 domain LS838_RS00020 PF02463 RecF/RecN/SMC N terminal domain LS838_RS00025 PF00204 DNA gyrase B LS838_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus LS838_RS00025 PF01751 Toprim domain LS838_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LS838_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A LS838_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller LS838_RS00035 PF01250 Ribosomal protein S6 LS838_RS00040 PF00436 Single-strand binding protein family LS838_RS00045 PF01084 Ribosomal protein S18 LS838_RS00050 PF01368 DHH family LS838_RS00050 PF02272 DHHA1 domain LS838_RS00055 PF01281 Ribosomal protein L9, N-terminal domain LS838_RS00055 PF03948 Ribosomal protein L9, C-terminal domain LS838_RS00060 PF00772 DnaB-like helicase N terminal domain LS838_RS00060 PF03796 DnaB-like helicase C terminal domain LS838_RS00065 PF11187 Protein of unknown function (DUF2974) LS838_RS00070 PF07282 LS838_RS00070 LS838_RS00085 PF02308 LS838_RS00085 LS838_RS00095 PF01381 Helix-turn-helix LS838_RS00100 PF07690 Major Facilitator Superfamily LS838_RS00110 PF00899 ThiF family LS838_RS00120 PF00005 ABC transporter LS838_RS00120 PF00664 ABC transporter transmembrane region LS838_RS00125 PF00005 ABC transporter LS838_RS00125 PF00664 ABC transporter transmembrane region LS838_RS00135 PF00005 ABC transporter LS838_RS00140 PF03649 LS838_RS00140 LS838_RS00150 PF01183 Glycosyl hydrolases family 25 LS838_RS00150 PF03217 LS838_RS00150 LS838_RS00155 PF00583 Acetyltransferase (GNAT) family LS838_RS00160 PF08543 Phosphomethylpyrimidine kinase LS838_RS00165 PF07155 ECF-type riboflavin transporter, S component LS838_RS00170 PF00271 Helicase conserved C-terminal domain LS838_RS00170 PF04851 Type III restriction enzyme, res subunit LS838_RS00170 PF11907 LS838_RS00170 LS838_RS00170 PF13091 PLD-like domain LS838_RS00175 PF06161 LS838_RS00175 LS838_RS00180 PF14317 LS838_RS00180 LS838_RS00185 PF02082 Transcriptional regulator LS838_RS00190 PF13460 NADH(P)-binding LS838_RS00195 PF01361 Tautomerase enzyme LS838_RS00215 PF02086 D12 class N6 adenine-specific DNA methyltransferase LS838_RS00220 PF02086 D12 class N6 adenine-specific DNA methyltransferase LS838_RS00230 PF01609 Transposase DDE domain LS838_RS00265 PF00232 Glycosyl hydrolase family 1 LS838_RS00275 PF00232 Glycosyl hydrolase family 1 LS838_RS00280 PF01238 Phosphomannose isomerase type I LS838_RS00285 PF00480 ROK family LS838_RS00300 PF04545 Sigma-70, region 4 LS838_RS00310 PF05031 Iron Transport-associated domain LS838_RS00315 PF05031 Iron Transport-associated domain LS838_RS00320 PF01385 LS838_RS00320 LS838_RS00320 PF07282 LS838_RS00320 LS838_RS00325 PF01497 Periplasmic binding protein LS838_RS00330 PF01032 FecCD transport family LS838_RS00335 PF00005 ABC transporter LS838_RS00340 PF00230 Major intrinsic protein LS838_RS00345 PF00356 Bacterial regulatory proteins, lacI family LS838_RS00345 PF13377 Periplasmic binding protein-like domain LS838_RS00350 PF00128 Alpha amylase, catalytic domain LS838_RS00365 PF00535 Glycosyl transferase family 2 LS838_RS00380 PF08876 LS838_RS00380 LS838_RS00385 PF02645 Uncharacterised protein, DegV family COG1307 LS838_RS00395 PF00239 Resolvase, N terminal domain LS838_RS00395 PF00376 MerR family regulatory protein LS838_RS00400 PF07282 LS838_RS00400 LS838_RS00405 PF13472 GDSL-like Lipase/Acylhydrolase family LS838_RS00410 PF00300 Histidine phosphatase superfamily (branch 1) LS838_RS00420 PF14239 LS838_RS00420 LS838_RS00435 PF02371 LS838_RS00435 LS838_RS00440 PF02632 BioY family LS838_RS00445 PF13419 Haloacid dehalogenase-like hydrolase LS838_RS00455 PF03372 Endonuclease/Exonuclease/phosphatase family LS838_RS00465 PF00056 lactate/malate dehydrogenase, NAD binding domain LS838_RS00465 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LS838_RS00470 PF00248 Aldo/keto reductase family LS838_RS00475 PF02867 Ribonucleotide reductase, barrel domain LS838_RS00480 PF14478 Domain of unknown function (DUF4430) LS838_RS00485 PF12822 Protein of unknown function (DUF3816) LS838_RS00490 PF01923 Cobalamin adenosyltransferase LS838_RS00495 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LS838_RS00495 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LS838_RS00500 PF01565 FAD binding domain LS838_RS00500 PF02913 FAD linked oxidases, C-terminal domain LS838_RS00505 PF01327 Polypeptide deformylase LS838_RS00510 PF03180 NLPA lipoprotein LS838_RS00515 PF02664 S-Ribosylhomocysteinase (LuxS) LS838_RS00525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LS838_RS00525 PF00766 Electron transfer flavoprotein FAD-binding domain LS838_RS00525 PF02770 Acyl-CoA dehydrogenase, middle domain LS838_RS00525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LS838_RS00530 PF00005 ABC transporter LS838_RS00535 PF00005 ABC transporter LS838_RS00535 PF00664 ABC transporter transmembrane region LS838_RS00540 PF00488 MutS domain V LS838_RS00540 PF05192 MutS domain III LS838_RS00550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LS838_RS00550 PF03466 LysR substrate binding domain LS838_RS00555 PF01717 Cobalamin-independent synthase, Catalytic domain LS838_RS00560 PF01797 Transposase IS200 like LS838_RS00565 PF01385 LS838_RS00565 LS838_RS00565 PF07282 LS838_RS00565 LS838_RS00570 PF00480 ROK family LS838_RS00580 PF07690 Major Facilitator Superfamily LS838_RS00590 PF07690 Major Facilitator Superfamily LS838_RS00595 PF00890 FAD binding domain LS838_RS00595 PF04205 FMN-binding domain LS838_RS00600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LS838_RS00600 PF03466 LysR substrate binding domain LS838_RS00605 PF08501 Shikimate dehydrogenase substrate binding domain LS838_RS00610 PF07690 Major Facilitator Superfamily LS838_RS00615 PF01487 Type I 3-dehydroquinase LS838_RS00625 PF00232 Glycosyl hydrolase family 1 LS838_RS00630 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LS838_RS00630 PF00367 phosphotransferase system, EIIB LS838_RS00630 PF02378 Phosphotransferase system, EIIC LS838_RS00635 PF01385 LS838_RS00635 LS838_RS00635 PF07282 LS838_RS00635 LS838_RS00635 PF12323 LS838_RS00635 LS838_RS00640 PF08501 Shikimate dehydrogenase substrate binding domain LS838_RS00645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LS838_RS00645 PF03466 LysR substrate binding domain LS838_RS00650 PF00890 FAD binding domain LS838_RS00650 PF04205 FMN-binding domain LS838_RS00660 PF00561 alpha/beta hydrolase fold LS838_RS00665 PF13173 AAA domain LS838_RS00665 PF13635 LS838_RS00665 LS838_RS00690 PF01553 Acyltransferase LS838_RS00695 PF01501 Glycosyl transferase family 8 LS838_RS00710 PF00072 Response regulator receiver domain LS838_RS00710 PF00486 Transcriptional regulatory protein, C terminal LS838_RS00715 PF00512 His Kinase A (phospho-acceptor) domain LS838_RS00715 PF00672 HAMP domain LS838_RS00715 PF00989 PAS fold LS838_RS00715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LS838_RS00720 PF07435 YycH protein LS838_RS00725 PF09648 YycH protein LS838_RS00730 PF12706 Beta-lactamase superfamily domain LS838_RS00735 PF13180 PDZ domain LS838_RS00735 PF13365 Trypsin-like peptidase domain LS838_RS00740 PF02590 Predicted SPOUT methyltransferase LS838_RS00760 PF01243 Pyridoxamine 5'-phosphate oxidase LS838_RS00765 PF02361 Cobalt transport protein LS838_RS00770 PF00005 ABC transporter LS838_RS00775 PF07690 Major Facilitator Superfamily LS838_RS00780 PF12833 Helix-turn-helix domain LS838_RS00790 PF01381 Helix-turn-helix LS838_RS00805 PF01435 Peptidase family M48 LS838_RS00810 PF04011 LemA family LS838_RS00815 PF03600 Citrate transporter LS838_RS00820 PF01844 HNH endonuclease LS838_RS00825 PF00877 NlpC/P60 family LS838_RS00825 PF01476 LysM domain LS838_RS00830 PF00563 EAL domain LS838_RS00830 PF00990 GGDEF domain LS838_RS00845 PF00005 ABC transporter LS838_RS00850 PF00497 Bacterial extracellular solute-binding proteins, family 3 LS838_RS00850 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS00855 PF02245 Methylpurine-DNA glycosylase (MPG) LS838_RS00860 PF04343 LS838_RS00860 LS838_RS00865 PF02146 Sir2 family LS838_RS00875 PF13091 PLD-like domain LS838_RS00875 PF13396 LS838_RS00875 LS838_RS00880 PF06028 Alpha/beta hydrolase of unknown function (DUF915) LS838_RS00885 PF00075 RNase H LS838_RS00885 PF01693 Caulimovirus viroplasmin LS838_RS00890 PF06207 LS838_RS00890 LS838_RS00895 PF00535 Glycosyl transferase family 2 LS838_RS00900 PF00561 alpha/beta hydrolase fold LS838_RS00905 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LS838_RS00905 PF14572 Phosphoribosyl synthetase-associated domain LS838_RS00910 PF00440 Bacterial regulatory proteins, tetR family LS838_RS00920 PF00027 Cyclic nucleotide-binding domain LS838_RS00920 PF13545 Crp-like helix-turn-helix domain LS838_RS00925 PF00188 Cysteine-rich secretory protein family LS838_RS00930 PF01820 D-ala D-ala ligase N-terminus LS838_RS00930 PF07478 D-ala D-ala ligase C-terminus LS838_RS00935 PF13411 MerR HTH family regulatory protein LS838_RS00940 PF07907 LS838_RS00940 LS838_RS00945 PF07907 LS838_RS00945 LS838_RS00950 PF07859 alpha/beta hydrolase fold LS838_RS00955 PF01797 Transposase IS200 like LS838_RS00960 PF01385 LS838_RS00960 LS838_RS00960 PF07282 LS838_RS00960 LS838_RS00965 PF00128 Alpha amylase, catalytic domain LS838_RS00965 PF11941 Domain of unknown function (DUF3459) LS838_RS00970 PF00356 Bacterial regulatory proteins, lacI family LS838_RS00970 PF13377 Periplasmic binding protein-like domain LS838_RS00975 PF00128 Alpha amylase, catalytic domain LS838_RS00980 PF00128 Alpha amylase, catalytic domain LS838_RS00980 PF02903 Alpha amylase, N-terminal ig-like domain LS838_RS00985 PF03632 Glycosyl hydrolase family 65 central catalytic domain LS838_RS00985 PF03633 Glycosyl hydrolase family 65, C-terminal domain LS838_RS00985 PF03636 Glycosyl hydrolase family 65, N-terminal domain LS838_RS00990 PF13419 Haloacid dehalogenase-like hydrolase LS838_RS00995 PF00005 ABC transporter LS838_RS00995 PF08402 TOBE domain LS838_RS01005 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS01010 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS01015 PF00754 F5/8 type C domain LS838_RS01015 PF01055 Glycosyl hydrolases family 31 LS838_RS01020 PF01979 Amidohydrolase family LS838_RS01040 PF00005 ABC transporter LS838_RS01050 PF00072 Response regulator receiver domain LS838_RS01050 PF04397 LytTr DNA-binding domain LS838_RS01055 PF14501 GHKL domain LS838_RS01060 PF05014 Nucleoside 2-deoxyribosyltransferase LS838_RS01065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LS838_RS01070 PF13350 Tyrosine phosphatase family LS838_RS01075 PF00582 Universal stress protein family LS838_RS01080 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein LS838_RS01085 PF00005 ABC transporter LS838_RS01090 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS01095 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS01100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LS838_RS01110 PF00149 Calcineurin-like phosphoesterase LS838_RS01115 PF00733 Asparagine synthase LS838_RS01115 PF13537 Glutamine amidotransferase domain LS838_RS01125 PF13597 Anaerobic ribonucleoside-triphosphate reductase LS838_RS01130 PF13353 4Fe-4S single cluster domain LS838_RS01135 PF01883 Domain of unknown function DUF59 LS838_RS01135 PF08984 Domain of unknown function (DUF1858) LS838_RS01140 PF01814 Hemerythrin HHE cation binding domain LS838_RS01140 PF04282 LS838_RS01140 LS838_RS01140 PF13596 PAS domain LS838_RS01145 PF07690 Major Facilitator Superfamily LS838_RS01155 PF01431 Peptidase family M13 LS838_RS01155 PF05649 Peptidase family M13 LS838_RS01160 PF02705 LS838_RS01160 LS838_RS01180 PF11148 LS838_RS01180 LS838_RS01190 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LS838_RS01190 PF03217 LS838_RS01190 LS838_RS01195 PF01510 N-acetylmuramoyl-L-alanine amidase LS838_RS01195 PF03217 LS838_RS01195 LS838_RS01200 PF00999 Sodium/hydrogen exchanger family LS838_RS01200 PF02080 TrkA-C domain LS838_RS01200 PF02254 TrkA-N domain LS838_RS01205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LS838_RS01215 PF00300 Histidine phosphatase superfamily (branch 1) LS838_RS01220 PF03816 Cell envelope-related transcriptional attenuator domain LS838_RS01225 PF02660 LS838_RS01225 LS838_RS01230 PF00884 Sulfatase LS838_RS01235 PF01757 LS838_RS01235 LS838_RS01240 PF00579 tRNA synthetases class I (W and Y) LS838_RS01240 PF01479 S4 domain LS838_RS01255 PF13451 LS838_RS01255 LS838_RS01280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LS838_RS01285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LS838_RS01295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LS838_RS01305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LS838_RS01310 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS01315 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS01315 PF12911 LS838_RS01315 LS838_RS01320 PF00005 ABC transporter LS838_RS01320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LS838_RS01325 PF00005 ABC transporter LS838_RS01325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LS838_RS01330 PF06161 LS838_RS01330 LS838_RS01335 PF03051 Peptidase C1-like family LS838_RS01340 PF03051 Peptidase C1-like family LS838_RS01345 PF00011 Hsp20/alpha crystallin family LS838_RS01350 PF01272 Transcription elongation factor, GreA/GreB, C-term LS838_RS01350 PF03449 Transcription elongation factor, N-terminal LS838_RS01355 PF00709 Adenylosuccinate synthetase LS838_RS01360 PF00478 IMP dehydrogenase / GMP reductase domain LS838_RS01375 PF00860 Permease family LS838_RS01380 PF00156 Phosphoribosyl transferase domain LS838_RS01385 PF00478 IMP dehydrogenase / GMP reductase domain LS838_RS01390 PF00117 Glutamine amidotransferase class-I LS838_RS01390 PF00958 GMP synthase C terminal domain LS838_RS01390 PF02540 NAD synthase LS838_RS01395 PF00005 ABC transporter LS838_RS01395 PF00664 ABC transporter transmembrane region LS838_RS01400 PF12833 Helix-turn-helix domain LS838_RS01405 PF00232 Glycosyl hydrolase family 1 LS838_RS01420 PF13749 ATP-dependent DNA helicase recG C-terminal LS838_RS01425 PF00324 Amino acid permease LS838_RS01430 PF02574 Homocysteine S-methyltransferase LS838_RS01435 PF04073 Aminoacyl-tRNA editing domain LS838_RS01440 PF01047 MarR family LS838_RS01445 PF00710 Asparaginase LS838_RS01450 PF08282 haloacid dehalogenase-like hydrolase LS838_RS01455 PF01741 Large-conductance mechanosensitive channel, MscL LS838_RS01460 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LS838_RS01465 PF00857 Isochorismatase family LS838_RS01475 PF06961 LS838_RS01475 LS838_RS01480 PF01385 LS838_RS01480 LS838_RS01480 PF07282 LS838_RS01480 LS838_RS01485 PF00293 NUDIX domain LS838_RS01490 PF14501 GHKL domain LS838_RS01495 PF00072 Response regulator receiver domain LS838_RS01495 PF04397 LytTr DNA-binding domain LS838_RS01500 PF00005 ABC transporter LS838_RS01500 PF00664 ABC transporter transmembrane region LS838_RS01500 PF03412 Peptidase C39 family LS838_RS01505 PF01721 Class II bacteriocin LS838_RS01510 PF00085 Thioredoxin LS838_RS01515 PF08951 Enterocin A Immunity LS838_RS01540 PF02517 CAAX protease self-immunity LS838_RS01550 PF00579 tRNA synthetases class I (W and Y) LS838_RS01555 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LS838_RS01565 PF00122 E1-E2 ATPase LS838_RS01565 PF00690 Cation transporter/ATPase, N-terminus LS838_RS01565 PF00702 haloacid dehalogenase-like hydrolase LS838_RS01570 PF01588 Putative tRNA binding domain LS838_RS01570 PF09334 tRNA synthetases class I (M) LS838_RS01575 PF01026 TatD related DNase LS838_RS01580 PF01751 Toprim domain LS838_RS01580 PF13331 LS838_RS01580 LS838_RS01585 PF00398 Ribosomal RNA adenine dimethylase LS838_RS01590 PF06257 Protein of unknown function (DUF1021) LS838_RS01595 PF00156 Phosphoribosyl transferase domain LS838_RS01595 PF09182 Bacterial purine repressor, N-terminal LS838_RS01600 PF00132 Bacterial transferase hexapeptide (six repeats) LS838_RS01600 PF12804 MobA-like NTP transferase domain LS838_RS01610 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LS838_RS01610 PF14572 Phosphoribosyl synthetase-associated domain LS838_RS01615 PF01966 HD domain LS838_RS01620 PF09148 Domain of unknown function (DUF1934) LS838_RS01625 PF05066 HB1, ASXL, restriction endonuclease HTH domain LS838_RS01630 PF00117 Glutamine amidotransferase class-I LS838_RS01630 PF06418 CTP synthase N-terminus LS838_RS01635 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LS838_RS01640 PF01197 Ribosomal protein L31 LS838_RS01645 PF01225 Mur ligase family, catalytic domain LS838_RS01645 PF02875 Mur ligase family, glutamate ligase domain LS838_RS01645 PF08245 Mur ligase middle domain LS838_RS01650 PF00270 DEAD/DEAH box helicase LS838_RS01650 PF00271 Helicase conserved C-terminal domain LS838_RS01655 PF01648 4'-phosphopantetheinyl transferase superfamily LS838_RS01660 PF00842 Alanine racemase, C-terminal domain LS838_RS01660 PF01168 Alanine racemase, N-terminal domain LS838_RS01665 PF00571 CBS domain LS838_RS01670 PF01195 Peptidyl-tRNA hydrolase LS838_RS01675 PF00270 DEAD/DEAH box helicase LS838_RS01675 PF00271 Helicase conserved C-terminal domain LS838_RS01675 PF02559 CarD-like/TRCF domain LS838_RS01675 PF03461 TRCF domain LS838_RS01680 PF01479 S4 domain LS838_RS01685 PF04977 Septum formation initiator LS838_RS01690 PF00575 S1 RNA binding domain LS838_RS01695 PF01171 PP-loop family LS838_RS01700 PF00004 ATPase family associated with various cellular activities (AAA) LS838_RS01700 PF01434 Peptidase family M41 LS838_RS01700 PF06480 FtsH Extracellular LS838_RS01705 PF01430 Hsp33 protein LS838_RS01710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LS838_RS01715 PF01546 Peptidase family M20/M25/M40 LS838_RS01715 PF07687 Peptidase dimerisation domain LS838_RS01720 PF01207 Dihydrouridine synthase (Dus) LS838_RS01725 PF00152 tRNA synthetases class II (D, K and N) LS838_RS01725 PF01336 OB-fold nucleic acid binding domain LS838_RS01730 PF00239 Resolvase, N terminal domain LS838_RS01730 PF00376 MerR family regulatory protein LS838_RS01735 PF07282 LS838_RS01735 LS838_RS01745 PF00990 GGDEF domain LS838_RS01755 PF01053 Cys/Met metabolism PLP-dependent enzyme LS838_RS01760 PF16475 LS838_RS01760 LS838_RS01780 PF13185 GAF domain LS838_RS01785 PF00004 ATPase family associated with various cellular activities (AAA) LS838_RS01785 PF02861 Clp amino terminal domain LS838_RS01785 PF07724 AAA domain (Cdc48 subfamily) LS838_RS01785 PF10431 C-terminal, D2-small domain, of ClpB protein LS838_RS01790 PF08951 Enterocin A Immunity LS838_RS01795 PF00562 RNA polymerase Rpb2, domain 6 LS838_RS01795 PF04560 RNA polymerase Rpb2, domain 7 LS838_RS01795 PF04561 RNA polymerase Rpb2, domain 2 LS838_RS01795 PF04563 RNA polymerase beta subunit LS838_RS01795 PF04565 RNA polymerase Rpb2, domain 3 LS838_RS01795 PF10385 RNA polymerase beta subunit external 1 domain LS838_RS01800 PF00623 RNA polymerase Rpb1, domain 2 LS838_RS01800 PF04983 RNA polymerase Rpb1, domain 3 LS838_RS01800 PF04997 RNA polymerase Rpb1, domain 1 LS838_RS01800 PF04998 RNA polymerase Rpb1, domain 5 LS838_RS01800 PF05000 RNA polymerase Rpb1, domain 4 LS838_RS01810 PF08282 haloacid dehalogenase-like hydrolase LS838_RS01815 PF00164 Ribosomal protein S12/S23 LS838_RS01820 PF00177 Ribosomal protein S7p/S5e LS838_RS01825 PF00009 Elongation factor Tu GTP binding domain LS838_RS01825 PF00679 Elongation factor G C-terminus LS838_RS01825 PF03144 Elongation factor Tu domain 2 LS838_RS01825 PF03764 Elongation factor G, domain IV LS838_RS01825 PF14492 Elongation Factor G, domain II LS838_RS01830 PF00338 Ribosomal protein S10p/S20e LS838_RS01835 PF00297 Ribosomal protein L3 LS838_RS01840 PF00573 Ribosomal protein L4/L1 family LS838_RS01845 PF00276 Ribosomal protein L23 LS838_RS01850 PF00181 Ribosomal Proteins L2, RNA binding domain LS838_RS01850 PF03947 Ribosomal Proteins L2, C-terminal domain LS838_RS01855 PF00203 Ribosomal protein S19 LS838_RS01860 PF00237 Ribosomal protein L22p/L17e LS838_RS01865 PF00189 Ribosomal protein S3, C-terminal domain LS838_RS01865 PF07650 KH domain LS838_RS01870 PF00252 Ribosomal protein L16p/L10e LS838_RS01875 PF00831 Ribosomal L29 protein LS838_RS01880 PF00366 Ribosomal protein S17 LS838_RS01885 PF00238 Ribosomal protein L14p/L23e LS838_RS01890 PF00467 KOW motif LS838_RS01890 PF17136 LS838_RS01890 LS838_RS01895 PF00281 Ribosomal protein L5 LS838_RS01895 PF00673 ribosomal L5P family C-terminus LS838_RS01900 PF00253 Ribosomal protein S14p/S29e LS838_RS01905 PF00410 Ribosomal protein S8 LS838_RS01910 PF00347 Ribosomal protein L6 LS838_RS01915 PF00861 Ribosomal L18p/L5e family LS838_RS01920 PF00333 Ribosomal protein S5, N-terminal domain LS838_RS01920 PF03719 Ribosomal protein S5, C-terminal domain LS838_RS01925 PF00327 Ribosomal protein L30p/L7e LS838_RS01930 PF00828 Ribosomal protein L18e/L15 LS838_RS01935 PF00344 SecY translocase LS838_RS01940 PF00406 Adenylate kinase LS838_RS01940 PF05191 Adenylate kinase, active site lid LS838_RS01945 PF01176 Translation initiation factor 1A / IF-1 LS838_RS01950 PF00444 Ribosomal protein L36 LS838_RS01955 PF00416 Ribosomal protein S13/S18 LS838_RS01960 PF00411 Ribosomal protein S11 LS838_RS01965 PF01000 RNA polymerase Rpb3/RpoA insert domain LS838_RS01965 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LS838_RS01965 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LS838_RS01970 PF01196 Ribosomal protein L17 LS838_RS01975 PF00005 ABC transporter LS838_RS01980 PF00005 ABC transporter LS838_RS01985 PF02361 Cobalt transport protein LS838_RS01990 PF01416 tRNA pseudouridine synthase LS838_RS01995 PF00572 Ribosomal protein L13 LS838_RS02000 PF00380 Ribosomal protein S9/S16 LS838_RS02015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LS838_RS02020 PF00293 NUDIX domain LS838_RS02020 PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal LS838_RS02025 PF07690 Major Facilitator Superfamily LS838_RS02030 PF01161 Phosphatidylethanolamine-binding protein LS838_RS02040 PF00155 Aminotransferase class I and II LS838_RS02045 PF13303 LS838_RS02045 LS838_RS02060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LS838_RS02075 PF00392 Bacterial regulatory proteins, gntR family LS838_RS02075 PF07702 UTRA domain LS838_RS02080 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LS838_RS02085 PF01943 LS838_RS02085 LS838_RS02085 PF14667 Polysaccharide biosynthesis C-terminal domain LS838_RS02090 PF03808 LS838_RS02090 LS838_RS02095 PF00534 Glycosyl transferases group 1 LS838_RS02095 PF13439 Glycosyltransferase Family 4 LS838_RS02100 PF04488 Glycosyltransferase sugar-binding region containing DXD motif LS838_RS02105 PF02540 NAD synthase LS838_RS02110 PF00122 E1-E2 ATPase LS838_RS02110 PF00689 Cation transporting ATPase, C-terminus LS838_RS02110 PF00690 Cation transporter/ATPase, N-terminus LS838_RS02110 PF00702 haloacid dehalogenase-like hydrolase LS838_RS02125 PF00005 ABC transporter LS838_RS02130 PF10263 LS838_RS02130 LS838_RS02140 PF12822 Protein of unknown function (DUF3816) LS838_RS02145 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LS838_RS02150 PF00580 UvrD/REP helicase N-terminal domain LS838_RS02150 PF13361 UvrD-like helicase C-terminal domain LS838_RS02155 PF00533 BRCA1 C Terminus (BRCT) domain LS838_RS02155 PF01653 NAD-dependent DNA ligase adenylation domain LS838_RS02155 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LS838_RS02155 PF03120 NAD-dependent DNA ligase OB-fold domain LS838_RS02155 PF12826 Helix-hairpin-helix motif LS838_RS02155 PF14520 Helix-hairpin-helix domain LS838_RS02160 PF07537 CamS sex pheromone cAM373 precursor LS838_RS02165 PF02686 Glu-tRNAGln amidotransferase C subunit LS838_RS02170 PF01425 Amidase LS838_RS02175 PF02637 GatB domain LS838_RS02175 PF02934 GatB/GatE catalytic domain LS838_RS02180 PF00781 Diacylglycerol kinase catalytic domain LS838_RS02185 PF06736 LS838_RS02185 LS838_RS02190 PF01938 TRAM domain LS838_RS02190 PF05958 tRNA (Uracil-5-)-methyltransferase LS838_RS02195 PF04471 Restriction endonuclease LS838_RS02195 PF14338 LS838_RS02195 LS838_RS02200 PF00194 Eukaryotic-type carbonic anhydrase LS838_RS02220 PF00122 E1-E2 ATPase LS838_RS02220 PF00702 haloacid dehalogenase-like hydrolase LS838_RS02225 PF00403 Heavy-metal-associated domain LS838_RS02235 PF00027 Cyclic nucleotide-binding domain LS838_RS02235 PF13545 Crp-like helix-turn-helix domain LS838_RS02240 PF03992 Antibiotic biosynthesis monooxygenase LS838_RS02245 PF05525 LS838_RS02245 LS838_RS02250 PF08713 DNA alkylation repair enzyme LS838_RS02255 PF00293 NUDIX domain LS838_RS02260 PF00563 EAL domain LS838_RS02270 PF00132 Bacterial transferase hexapeptide (six repeats) LS838_RS02275 PF06993 LS838_RS02275 LS838_RS02280 PF01037 AsnC family LS838_RS02280 PF13404 AsnC-type helix-turn-helix domain LS838_RS02285 PF01380 SIS domain LS838_RS02285 PF13522 Glutamine amidotransferase domain LS838_RS02290 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LS838_RS02290 PF05043 Mga helix-turn-helix domain LS838_RS02290 PF08279 HTH domain LS838_RS02295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LS838_RS02295 PF02378 Phosphotransferase system, EIIC LS838_RS02300 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LS838_RS02305 PF01232 Mannitol dehydrogenase Rossmann domain LS838_RS02305 PF08125 Mannitol dehydrogenase C-terminal domain LS838_RS02310 PF00311 Phosphoenolpyruvate carboxylase LS838_RS02315 PF03547 LS838_RS02315 LS838_RS02320 PF00005 ABC transporter LS838_RS02320 PF12848 ABC transporter LS838_RS02335 PF07690 Major Facilitator Superfamily LS838_RS02340 PF01027 Inhibitor of apoptosis-promoting Bax1 LS838_RS02345 PF01177 Asp/Glu/Hydantoin racemase LS838_RS02350 PF03577 LS838_RS02350 LS838_RS02355 PF05343 M42 glutamyl aminopeptidase LS838_RS02360 PF09819 LS838_RS02360 LS838_RS02365 PF00485 Phosphoribulokinase / Uridine kinase family LS838_RS02370 PF00485 Phosphoribulokinase / Uridine kinase family LS838_RS02375 PF00005 ABC transporter LS838_RS02380 PF00497 Bacterial extracellular solute-binding proteins, family 3 LS838_RS02385 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS02390 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS02395 PF00497 Bacterial extracellular solute-binding proteins, family 3 LS838_RS02400 PF01966 HD domain LS838_RS02405 PF02503 Polyphosphate kinase middle domain LS838_RS02405 PF13089 Polyphosphate kinase N-terminal domain LS838_RS02405 PF13090 Polyphosphate kinase C-terminal domain LS838_RS02410 PF10009 LS838_RS02410 LS838_RS02415 PF11187 Protein of unknown function (DUF2974) LS838_RS02425 PF00294 pfkB family carbohydrate kinase LS838_RS02430 PF00834 Ribulose-phosphate 3 epimerase family LS838_RS02435 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LS838_RS02440 PF01156 Inosine-uridine preferring nucleoside hydrolase LS838_RS02445 PF00392 Bacterial regulatory proteins, gntR family LS838_RS02445 PF07702 UTRA domain LS838_RS02450 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase LS838_RS02450 PF09363 XFP C-terminal domain LS838_RS02450 PF09364 XFP N-terminal domain LS838_RS02455 PF04203 Sortase family LS838_RS02460 PF00571 CBS domain LS838_RS02460 PF01595 LS838_RS02460 LS838_RS02460 PF03471 Transporter associated domain LS838_RS02465 PF00156 Phosphoribosyl transferase domain LS838_RS02470 PF13520 Amino acid permease LS838_RS02480 PF00270 DEAD/DEAH box helicase LS838_RS02480 PF00271 Helicase conserved C-terminal domain LS838_RS02485 PF02378 Phosphotransferase system, EIIC LS838_RS02500 PF13303 LS838_RS02500 LS838_RS02510 PF00860 Permease family LS838_RS02515 PF06838 Methionine gamma-lyase LS838_RS02520 PF01276 Orn/Lys/Arg decarboxylase, major domain LS838_RS02520 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LS838_RS02530 PF13520 Amino acid permease LS838_RS02540 PF02350 UDP-N-acetylglucosamine 2-epimerase LS838_RS02545 PF04138 LS838_RS02545 LS838_RS02550 PF00258 Flavodoxin LS838_RS02555 PF00557 Metallopeptidase family M24 LS838_RS02560 PF03631 LS838_RS02560 LS838_RS02565 PF00483 Nucleotidyl transferase LS838_RS02575 PF12146 Putative lysophospholipase LS838_RS02580 PF01938 TRAM domain LS838_RS02580 PF05958 tRNA (Uracil-5-)-methyltransferase LS838_RS02585 PF02631 RecX family LS838_RS02600 PF00571 CBS domain LS838_RS02600 PF03471 Transporter associated domain LS838_RS02605 PF00009 Elongation factor Tu GTP binding domain LS838_RS02605 PF16658 LS838_RS02605 LS838_RS02615 PF07731 Multicopper oxidase LS838_RS02615 PF07732 Multicopper oxidase LS838_RS02620 PF08860 Domain of unknown function (DUF1827) LS838_RS02625 PF00004 ATPase family associated with various cellular activities (AAA) LS838_RS02625 PF02151 UvrB/uvrC motif LS838_RS02625 PF07724 AAA domain (Cdc48 subfamily) LS838_RS02625 PF10431 C-terminal, D2-small domain, of ClpB protein LS838_RS02635 PF00381 PTS HPr component phosphorylation site LS838_RS02640 PF00391 PEP-utilising enzyme, mobile domain LS838_RS02640 PF02896 PEP-utilising enzyme, TIM barrel domain LS838_RS02640 PF05524 PEP-utilising enzyme, N-terminal LS838_RS02645 PF03960 ArsC family LS838_RS02650 PF05389 Negative regulator of genetic competence (MecA) LS838_RS02655 PF06054 LS838_RS02655 LS838_RS02660 PF13743 Thioredoxin LS838_RS02665 PF01928 CYTH domain LS838_RS02670 PF04607 Region found in RelA / SpoT proteins LS838_RS02675 PF01513 ATP-NAD kinase LS838_RS02680 PF00849 RNA pseudouridylate synthase LS838_RS02690 PF02673 LS838_RS02690 LS838_RS02695 PF10282 Lactonase, 7-bladed beta-propeller LS838_RS02700 PF03829 PTS system glucitol/sorbitol-specific IIA component LS838_RS02705 PF01594 LS838_RS02705 LS838_RS02710 PF00588 SpoU rRNA Methylase family LS838_RS02715 PF06619 Protein of unknown function (DUF1149) LS838_RS02720 PF01580 FtsK/SpoIIIE family LS838_RS02720 PF09397 Ftsk gamma domain LS838_RS02725 PF05193 Peptidase M16 inactive domain LS838_RS02730 PF00675 Insulinase (Peptidase family M16) LS838_RS02730 PF05193 Peptidase M16 inactive domain LS838_RS02735 PF13561 Enoyl-(Acyl carrier protein) reductase LS838_RS02740 PF13413 Helix-turn-helix domain LS838_RS02745 PF01066 CDP-alcohol phosphatidyltransferase LS838_RS02750 PF00154 recA bacterial DNA recombination protein LS838_RS02755 PF00013 KH domain LS838_RS02755 PF01966 HD domain LS838_RS02755 PF12072 LS838_RS02755 LS838_RS02760 PF00953 Glycosyl transferase family 4 LS838_RS02765 PF01205 Uncharacterized protein family UPF0029 LS838_RS02765 PF09186 Domain of unknown function (DUF1949) LS838_RS02770 PF00270 DEAD/DEAH box helicase LS838_RS02770 PF00271 Helicase conserved C-terminal domain LS838_RS02780 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LS838_RS02780 PF16321 LS838_RS02780 LS838_RS02785 PF01043 SecA preprotein cross-linking domain LS838_RS02785 PF07516 SecA Wing and Scaffold domain LS838_RS02785 PF07517 SecA DEAD-like domain LS838_RS02790 PF00472 RF-1 domain LS838_RS02790 PF03462 PCRF domain LS838_RS02800 PF02603 HPr Serine kinase N terminus LS838_RS02800 PF07475 HPr Serine kinase C-terminal domain LS838_RS02805 PF01790 LS838_RS02805 LS838_RS02810 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LS838_RS02810 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LS838_RS02815 PF07992 Pyridine nucleotide-disulphide oxidoreductase LS838_RS02820 PF00271 Helicase conserved C-terminal domain LS838_RS02820 PF02151 UvrB/uvrC motif LS838_RS02820 PF04851 Type III restriction enzyme, res subunit LS838_RS02820 PF12344 Ultra-violet resistance protein B LS838_RS02825 PF00005 ABC transporter LS838_RS02830 PF03729 LS838_RS02830 LS838_RS02835 PF04951 D-aminopeptidase LS838_RS02840 PF03576 Peptidase family S58 LS838_RS02845 PF03668 LS838_RS02845 LS838_RS02850 PF01933 Uncharacterised protein family UPF0052 LS838_RS02855 PF02650 WhiA C-terminal HTH domain LS838_RS02855 PF10298 WhiA N-terminal LAGLIDADG-like domain LS838_RS02855 PF14527 WhiA LAGLIDADG-like domain LS838_RS02860 PF00574 Clp protease LS838_RS02865 PF13457 SH3-like domain LS838_RS02870 PF04392 ABC transporter substrate binding protein LS838_RS02875 PF02653 LS838_RS02875 LS838_RS02880 PF00005 ABC transporter LS838_RS02890 PF04198 Putative sugar-binding domain LS838_RS02895 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LS838_RS02895 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LS838_RS02900 PF00162 Phosphoglycerate kinase LS838_RS02905 PF00121 Triosephosphate isomerase LS838_RS02910 PF00583 Acetyltransferase (GNAT) family LS838_RS02920 PF08282 haloacid dehalogenase-like hydrolase LS838_RS02925 PF03167 Uracil DNA glycosylase superfamily LS838_RS02930 PF01515 Phosphate acetyl/butaryl transferase LS838_RS02935 PF02367 Uncharacterised P-loop hydrolase UPF0079 LS838_RS02940 PF00929 Exonuclease LS838_RS02945 PF01565 FAD binding domain LS838_RS02945 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LS838_RS02950 PF00005 ABC transporter LS838_RS02950 PF08402 TOBE domain LS838_RS02955 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS02960 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS02965 PF13416 Bacterial extracellular solute-binding protein LS838_RS02970 PF02457 DisA bacterial checkpoint controller nucleotide-binding LS838_RS02975 PF07949 YbbR-like protein LS838_RS02980 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LS838_RS02980 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LS838_RS02980 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LS838_RS02980 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LS838_RS02985 PF08282 haloacid dehalogenase-like hydrolase LS838_RS02990 PF00144 Beta-lactamase LS838_RS02995 PF03965 Penicillinase repressor LS838_RS03000 PF13473 Cupredoxin-like domain LS838_RS03005 PF00122 E1-E2 ATPase LS838_RS03005 PF00702 haloacid dehalogenase-like hydrolase LS838_RS03010 PF02537 LS838_RS03010 LS838_RS03015 PF02537 LS838_RS03015 LS838_RS03025 PF00563 EAL domain LS838_RS03025 PF00990 GGDEF domain LS838_RS03035 PF01451 Low molecular weight phosphotyrosine protein phosphatase LS838_RS03040 PF13460 NADH(P)-binding LS838_RS03045 PF13520 Amino acid permease LS838_RS03050 PF01625 Peptide methionine sulfoxide reductase LS838_RS03055 PF01734 Patatin-like phospholipase LS838_RS03060 PF01297 Periplasmic solute binding protein family LS838_RS03065 PF04892 LS838_RS03065 LS838_RS03070 PF01709 Transcriptional regulator LS838_RS03075 PF00437 Type II/IV secretion system protein LS838_RS03080 PF00482 Type II secretion system (T2SS), protein F LS838_RS03085 PF13544 LS838_RS03085 LS838_RS03105 PF02384 N-6 DNA Methylase LS838_RS03110 PF00871 Acetokinase family LS838_RS03120 PF00072 Response regulator receiver domain LS838_RS03120 PF00486 Transcriptional regulatory protein, C terminal LS838_RS03125 PF00512 His Kinase A (phospho-acceptor) domain LS838_RS03125 PF00672 HAMP domain LS838_RS03125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LS838_RS03130 PF00884 Sulfatase LS838_RS03135 PF04892 LS838_RS03135 LS838_RS03140 PF00342 Phosphoglucose isomerase LS838_RS03145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LS838_RS03160 PF00144 Beta-lactamase LS838_RS03170 PF08245 Mur ligase middle domain LS838_RS03170 PF08353 LS838_RS03170 LS838_RS03175 PF00265 Thymidine kinase LS838_RS03180 PF00472 RF-1 domain LS838_RS03180 PF03462 PCRF domain LS838_RS03185 PF05175 Methyltransferase small domain LS838_RS03190 PF01300 Telomere recombination LS838_RS03190 PF03481 Putative GTP-binding controlling metal-binding LS838_RS03195 PF14681 Uracil phosphoribosyltransferase LS838_RS03200 PF00119 ATP synthase A chain LS838_RS03205 PF00137 ATP synthase subunit C LS838_RS03210 PF00430 ATP synthase B/B' CF(0) LS838_RS03215 PF00213 ATP synthase delta (OSCP) subunit LS838_RS03220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LS838_RS03220 PF00306 ATP synthase alpha/beta chain, C terminal domain LS838_RS03220 PF02874 ATP synthase alpha/beta family, beta-barrel domain LS838_RS03225 PF00231 ATP synthase LS838_RS03230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LS838_RS03230 PF02874 ATP synthase alpha/beta family, beta-barrel domain LS838_RS03235 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LS838_RS03235 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LS838_RS03240 PF06612 LS838_RS03240 LS838_RS03245 PF06723 MreB/Mbl protein LS838_RS03250 PF01809 LS838_RS03250 LS838_RS03255 PF11184 LS838_RS03255 LS838_RS03260 PF01098 LS838_RS03260 LS838_RS03265 PF00582 Universal stress protein family LS838_RS03275 PF00004 ATPase family associated with various cellular activities (AAA) LS838_RS03275 PF12002 MgsA AAA+ ATPase C terminal LS838_RS03275 PF16193 LS838_RS03275 LS838_RS03280 PF07997 Protein of unknown function (DUF1694) LS838_RS03285 PF00163 Ribosomal protein S4/S9 N-terminal domain LS838_RS03285 PF01479 S4 domain LS838_RS03290 PF06160 LS838_RS03290 LS838_RS03295 PF00266 Aminotransferase class-V LS838_RS03300 PF02568 Thiamine biosynthesis protein (ThiI) LS838_RS03300 PF02926 THUMP domain LS838_RS03305 PF00849 RNA pseudouridylate synthase LS838_RS03305 PF01479 S4 domain LS838_RS03310 PF00133 tRNA synthetases class I (I, L, M and V) LS838_RS03310 PF08264 Anticodon-binding domain of tRNA LS838_RS03310 PF10458 Valyl tRNA synthetase tRNA binding arm LS838_RS03315 PF08245 Mur ligase middle domain LS838_RS03320 PF13419 Haloacid dehalogenase-like hydrolase LS838_RS03325 PF04002 RadC-like JAB domain LS838_RS03330 PF06723 MreB/Mbl protein LS838_RS03335 PF04085 rod shape-determining protein MreC LS838_RS03340 PF04093 LS838_RS03340 LS838_RS03345 PF13253 LS838_RS03345 LS838_RS03350 PF11877 LS838_RS03350 LS838_RS03355 PF02381 MraZ protein LS838_RS03360 PF01795 MraW methylase family LS838_RS03370 PF00905 Penicillin binding protein transpeptidase domain LS838_RS03370 PF03717 Penicillin-binding Protein dimerisation domain LS838_RS03370 PF03793 PASTA domain LS838_RS03375 PF00953 Glycosyl transferase family 4 LS838_RS03375 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LS838_RS03380 PF02875 Mur ligase family, glutamate ligase domain LS838_RS03380 PF08245 Mur ligase middle domain LS838_RS03385 PF03033 Glycosyltransferase family 28 N-terminal domain LS838_RS03385 PF04101 Glycosyltransferase family 28 C-terminal domain LS838_RS03390 PF08478 POTRA domain, FtsQ-type LS838_RS03395 PF02491 SHS2 domain inserted in FTSA LS838_RS03395 PF14450 Cell division protein FtsA LS838_RS03400 PF00091 Tubulin/FtsZ family, GTPase domain LS838_RS03400 PF12327 FtsZ family, C-terminal domain LS838_RS03405 PF04472 Protein of unknown function (DUF552) LS838_RS03410 PF02325 LS838_RS03410 LS838_RS03415 PF01479 S4 domain LS838_RS03420 PF00133 tRNA synthetases class I (I, L, M and V) LS838_RS03420 PF06827 Zinc finger found in FPG and IleRS LS838_RS03420 PF08264 Anticodon-binding domain of tRNA LS838_RS03425 PF00313 'Cold-shock' DNA-binding domain LS838_RS03430 PF00293 NUDIX domain LS838_RS03440 PF01048 Phosphorylase superfamily LS838_RS03445 PF00266 Aminotransferase class-V LS838_RS03450 PF08866 Putative amino acid metabolism LS838_RS03455 PF03054 tRNA methyl transferase LS838_RS03460 PF00300 Histidine phosphatase superfamily (branch 1) LS838_RS03465 PF14559 Tetratricopeptide repeat LS838_RS03470 PF13538 UvrD-like helicase C-terminal domain LS838_RS03470 PF13604 AAA domain LS838_RS03470 PF14490 Helix-hairpin-helix containing domain LS838_RS03480 PF07521 RNA-metabolising metallo-beta-lactamase LS838_RS03480 PF12706 Beta-lactamase superfamily domain LS838_RS03485 PF07288 Protein of unknown function (DUF1447) LS838_RS03490 PF01327 Polypeptide deformylase LS838_RS03495 PF00009 Elongation factor Tu GTP binding domain LS838_RS03495 PF00679 Elongation factor G C-terminus LS838_RS03495 PF03144 Elongation factor Tu domain 2 LS838_RS03495 PF14492 Elongation Factor G, domain II LS838_RS03500 PF01098 LS838_RS03500 LS838_RS03505 PF09902 LS838_RS03505 LS838_RS03510 PF03602 Conserved hypothetical protein 95 LS838_RS03515 PF01467 Cytidylyltransferase LS838_RS03520 PF05362 Lon protease (S16) C-terminal proteolytic domain LS838_RS03520 PF13180 PDZ domain LS838_RS03525 PF10531 SLBB domain LS838_RS03525 PF12836 Helix-hairpin-helix motif LS838_RS03530 PF00753 Metallo-beta-lactamase superfamily LS838_RS03530 PF03772 LS838_RS03530 LS838_RS03530 PF13567 LS838_RS03530 LS838_RS03535 PF06144 DNA polymerase III, delta subunit LS838_RS03540 PF01649 Ribosomal protein S20 LS838_RS03545 PF00312 Ribosomal protein S15 LS838_RS03550 PF00753 Metallo-beta-lactamase superfamily LS838_RS03550 PF07521 RNA-metabolising metallo-beta-lactamase LS838_RS03560 PF00009 Elongation factor Tu GTP binding domain LS838_RS03560 PF03143 Elongation factor Tu C-terminal domain LS838_RS03560 PF03144 Elongation factor Tu domain 2 LS838_RS03565 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LS838_RS03565 PF05697 Bacterial trigger factor protein (TF) LS838_RS03565 PF05698 Bacterial trigger factor protein (TF) C-terminus LS838_RS03570 PF06689 ClpX C4-type zinc finger LS838_RS03570 PF07724 AAA domain (Cdc48 subfamily) LS838_RS03570 PF10431 C-terminal, D2-small domain, of ClpB protein LS838_RS03575 PF01926 50S ribosome-binding GTPase LS838_RS03580 PF03729 LS838_RS03580 LS838_RS03580 PF11187 Protein of unknown function (DUF2974) LS838_RS03585 PF00881 Nitroreductase family LS838_RS03590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LS838_RS03600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LS838_RS03600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LS838_RS03605 PF00303 Thymidylate synthase LS838_RS03610 PF00186 Dihydrofolate reductase LS838_RS03615 PF00122 E1-E2 ATPase LS838_RS03615 PF00702 haloacid dehalogenase-like hydrolase LS838_RS03620 PF03180 NLPA lipoprotein LS838_RS03625 PF00005 ABC transporter LS838_RS03625 PF09383 NIL domain LS838_RS03630 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS03635 PF00890 FAD binding domain LS838_RS03640 PF01293 Phosphoenolpyruvate carboxykinase LS838_RS03665 PF00155 Aminotransferase class I and II LS838_RS03670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LS838_RS03670 PF03466 LysR substrate binding domain LS838_RS03675 PF00750 tRNA synthetases class I (R) LS838_RS03675 PF03485 Arginyl tRNA synthetase N terminal domain LS838_RS03675 PF05746 DALR anticodon binding domain LS838_RS03680 PF01316 Arginine repressor, DNA binding domain LS838_RS03680 PF02863 Arginine repressor, C-terminal domain LS838_RS03685 PF02441 Flavoprotein LS838_RS03685 PF04127 DNA / pantothenate metabolism flavoprotein LS838_RS03695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LS838_RS03695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LS838_RS03700 PF00270 DEAD/DEAH box helicase LS838_RS03700 PF00271 Helicase conserved C-terminal domain LS838_RS03700 PF00570 HRDC domain LS838_RS03700 PF09382 RQC domain LS838_RS03700 PF16124 LS838_RS03700 LS838_RS03705 PF01156 Inosine-uridine preferring nucleoside hydrolase LS838_RS03710 PF01541 GIY-YIG catalytic domain LS838_RS03710 PF02151 UvrB/uvrC motif LS838_RS03710 PF08459 UvrC Helix-hairpin-helix N-terminal LS838_RS03710 PF14520 Helix-hairpin-helix domain LS838_RS03715 PF01018 GTP1/OBG LS838_RS03715 PF01926 50S ribosome-binding GTPase LS838_RS03715 PF09269 Domain of unknown function (DUF1967) LS838_RS03720 PF01757 LS838_RS03720 LS838_RS03725 PF12706 Beta-lactamase superfamily domain LS838_RS03730 PF00106 short chain dehydrogenase LS838_RS03735 PF01783 Ribosomal L32p protein family LS838_RS03740 PF00149 Calcineurin-like phosphoesterase LS838_RS03740 PF02872 5'-nucleotidase, C-terminal domain LS838_RS03745 PF00176 SNF2 family N-terminal domain LS838_RS03745 PF00271 Helicase conserved C-terminal domain LS838_RS03755 PF04260 Protein of unknown function (DUF436) LS838_RS03760 PF07702 UTRA domain LS838_RS03765 PF03807 NADP oxidoreductase coenzyme F420-dependent LS838_RS03765 PF14748 Pyrroline-5-carboxylate reductase dimerisation LS838_RS03770 PF00171 Aldehyde dehydrogenase family LS838_RS03775 PF00696 Amino acid kinase family LS838_RS03775 PF01472 PUA domain LS838_RS03780 PF11151 LS838_RS03780 LS838_RS03785 PF02811 PHP domain LS838_RS03785 PF07733 Bacterial DNA polymerase III alpha subunit LS838_RS03785 PF14579 Helix-hairpin-helix motif LS838_RS03790 PF00365 Phosphofructokinase LS838_RS03795 PF00224 Pyruvate kinase, barrel domain LS838_RS03795 PF00391 PEP-utilising enzyme, mobile domain LS838_RS03795 PF02887 Pyruvate kinase, alpha/beta domain LS838_RS03805 PF01757 LS838_RS03805 LS838_RS03810 PF13509 S1 domain LS838_RS03815 PF00589 Phage integrase family LS838_RS03815 PF02899 Phage integrase, N-terminal SAM-like domain LS838_RS03825 PF02616 ScpA/B protein LS838_RS03830 PF04079 Putative transcriptional regulators (Ypuh-like) LS838_RS03835 PF00849 RNA pseudouridylate synthase LS838_RS03835 PF01479 S4 domain LS838_RS03840 PF12822 Protein of unknown function (DUF3816) LS838_RS03845 PF01476 LysM domain LS838_RS03850 PF02224 Cytidylate kinase LS838_RS03855 PF00575 S1 RNA binding domain LS838_RS03860 PF01926 50S ribosome-binding GTPase LS838_RS03860 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LS838_RS03865 PF00216 Bacterial DNA-binding protein LS838_RS03870 PF13174 Tetratricopeptide repeat LS838_RS03870 PF14559 Tetratricopeptide repeat LS838_RS03875 PF09586 LS838_RS03875 LS838_RS03880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LS838_RS03880 PF03466 LysR substrate binding domain LS838_RS03885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LS838_RS03885 PF03466 LysR substrate binding domain LS838_RS03905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LS838_RS03905 PF03466 LysR substrate binding domain LS838_RS03910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LS838_RS03910 PF03466 LysR substrate binding domain LS838_RS03915 PF00764 Arginosuccinate synthase LS838_RS03920 PF00206 Lyase LS838_RS03920 PF14698 Argininosuccinate lyase C-terminal LS838_RS03930 PF13443 Cro/C1-type HTH DNA-binding domain LS838_RS03940 PF00270 DEAD/DEAH box helicase LS838_RS03945 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) LS838_RS03950 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) LS838_RS03955 PF09344 CT1975-like protein LS838_RS03960 PF09704 CRISPR-associated protein (Cas_Cas5) LS838_RS03965 PF08798 CRISPR associated protein LS838_RS03970 PF01867 CRISPR associated protein Cas1 LS838_RS03975 PF00929 Exonuclease LS838_RS03975 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) LS838_RS03985 PF02195 ParB-like nuclease domain LS838_RS03990 PF04607 Region found in RelA / SpoT proteins LS838_RS03995 PF00072 Response regulator receiver domain LS838_RS03995 PF00486 Transcriptional regulatory protein, C terminal LS838_RS04000 PF00512 His Kinase A (phospho-acceptor) domain LS838_RS04000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LS838_RS04005 PF13395 HNH endonuclease LS838_RS04005 PF16592 LS838_RS04005 LS838_RS04010 PF01867 CRISPR associated protein Cas1 LS838_RS04015 PF09827 CRISPR associated protein Cas2 LS838_RS04020 PF09711 CRISPR-associated protein (Cas_Csn2) LS838_RS04025 PF00108 Thiolase, N-terminal domain LS838_RS04025 PF02803 Thiolase, C-terminal domain LS838_RS04030 PF00368 Hydroxymethylglutaryl-coenzyme A reductase LS838_RS04035 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal LS838_RS04035 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal LS838_RS04040 PF06738 LS838_RS04040 LS838_RS04040 PF12821 LS838_RS04040 LS838_RS04045 PF04073 Aminoacyl-tRNA editing domain LS838_RS04050 PF06325 Ribosomal protein L11 methyltransferase (PrmA) LS838_RS04055 PF02824 TGS domain LS838_RS04055 PF04607 Region found in RelA / SpoT proteins LS838_RS04055 PF13291 ACT domain LS838_RS04055 PF13328 HD domain LS838_RS04060 PF02580 D-Tyr-tRNA(Tyr) deacylase LS838_RS04065 PF03129 Anticodon binding domain LS838_RS04065 PF13393 Histidyl-tRNA synthetase LS838_RS04070 PF00152 tRNA synthetases class II (D, K and N) LS838_RS04070 PF01336 OB-fold nucleic acid binding domain LS838_RS04070 PF02938 GAD domain LS838_RS04080 PF09972 LS838_RS04080 LS838_RS04085 PF01594 LS838_RS04085 LS838_RS04090 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LS838_RS04090 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LS838_RS04095 PF00550 Phosphopantetheine attachment site LS838_RS04100 PF00698 Acyl transferase domain LS838_RS04105 PF13561 Enoyl-(Acyl carrier protein) reductase LS838_RS04110 PF00109 Beta-ketoacyl synthase, N-terminal domain LS838_RS04110 PF02801 Beta-ketoacyl synthase, C-terminal domain LS838_RS04115 PF00364 Biotin-requiring enzyme LS838_RS04120 PF07977 FabA-like domain LS838_RS04125 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain LS838_RS04125 PF02785 Biotin carboxylase C-terminal domain LS838_RS04125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LS838_RS04130 PF01039 Carboxyl transferase domain LS838_RS04135 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LS838_RS04140 PF13561 Enoyl-(Acyl carrier protein) reductase LS838_RS04145 PF02237 Biotin protein ligase C terminal domain LS838_RS04145 PF03099 Biotin/lipoate A/B protein ligase family LS838_RS04155 PF12978 Domain of Unknown Function with PDB structure (DUF3862) LS838_RS04160 PF01522 Polysaccharide deacetylase LS838_RS04175 PF01226 Formate/nitrite transporter LS838_RS04180 PF00171 Aldehyde dehydrogenase family LS838_RS04180 PF00465 Iron-containing alcohol dehydrogenase LS838_RS04210 PF00588 SpoU rRNA Methylase family LS838_RS04215 PF00733 Asparagine synthase LS838_RS04215 PF13537 Glutamine amidotransferase domain LS838_RS04295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LS838_RS04305 PF00563 EAL domain LS838_RS04315 PF12849 PBP superfamily domain LS838_RS04320 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS04325 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS04330 PF00005 ABC transporter LS838_RS04335 PF01895 PhoU domain LS838_RS04340 PF00072 Response regulator receiver domain LS838_RS04340 PF00486 Transcriptional regulatory protein, C terminal LS838_RS04345 PF00512 His Kinase A (phospho-acceptor) domain LS838_RS04345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LS838_RS04345 PF13188 PAS domain LS838_RS04350 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family LS838_RS04355 PF00005 ABC transporter LS838_RS04360 PF00293 NUDIX domain LS838_RS04370 PF00293 NUDIX domain LS838_RS04375 PF03606 LS838_RS04375 LS838_RS04380 PF00005 ABC transporter LS838_RS04385 PF00005 ABC transporter LS838_RS04390 PF02361 Cobalt transport protein LS838_RS04400 PF00563 EAL domain LS838_RS04420 PF08282 haloacid dehalogenase-like hydrolase LS838_RS04425 PF01047 MarR family LS838_RS04440 PF02660 LS838_RS04440 LS838_RS04445 PF00204 DNA gyrase B LS838_RS04445 PF00986 DNA gyrase B subunit, carboxyl terminus LS838_RS04445 PF01751 Toprim domain LS838_RS04445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LS838_RS04450 PF00521 DNA gyrase/topoisomerase IV, subunit A LS838_RS04450 PF03989 DNA gyrase C-terminal domain, beta-propeller LS838_RS04455 PF01368 DHH family LS838_RS04455 PF02833 DHHA2 domain LS838_RS04460 PF01070 FMN-dependent dehydrogenase LS838_RS04465 PF00288 GHMP kinases N terminal domain LS838_RS04465 PF08544 GHMP kinases C terminal LS838_RS04470 PF00288 GHMP kinases N terminal domain LS838_RS04475 PF00288 GHMP kinases N terminal domain LS838_RS04475 PF08544 GHMP kinases C terminal LS838_RS04480 PF12705 PD-(D/E)XK nuclease superfamily LS838_RS04485 PF00580 UvrD/REP helicase N-terminal domain LS838_RS04485 PF12705 PD-(D/E)XK nuclease superfamily LS838_RS04485 PF13361 UvrD-like helicase C-terminal domain LS838_RS04490 PF00929 Exonuclease LS838_RS04490 PF04851 Type III restriction enzyme, res subunit LS838_RS04490 PF13307 Helicase C-terminal domain LS838_RS04500 PF00152 tRNA synthetases class II (D, K and N) LS838_RS04500 PF01336 OB-fold nucleic acid binding domain LS838_RS04505 PF07261 Replication initiation and membrane attachment LS838_RS04510 PF00730 HhH-GPD superfamily base excision DNA repair protein LS838_RS04515 PF08282 haloacid dehalogenase-like hydrolase LS838_RS04520 PF07859 alpha/beta hydrolase fold LS838_RS04525 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LS838_RS04525 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LS838_RS04530 PF00326 Prolyl oligopeptidase family LS838_RS04535 PF00905 Penicillin binding protein transpeptidase domain LS838_RS04535 PF00912 Transglycosylase LS838_RS04540 PF03838 Recombination protein U LS838_RS04545 PF06908 Protein of unknown function (DUF1273) LS838_RS04550 PF05103 DivIVA protein LS838_RS04560 PF01170 Putative RNA methylase family UPF0020 LS838_RS04560 PF02926 THUMP domain LS838_RS04565 PF00149 Calcineurin-like phosphoesterase LS838_RS04575 PF01268 Formate--tetrahydrofolate ligase LS838_RS04580 PF01252 LS838_RS04580 LS838_RS04585 PF00849 RNA pseudouridylate synthase LS838_RS04585 PF01479 S4 domain LS838_RS04590 PF00117 Glutamine amidotransferase class-I LS838_RS04590 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LS838_RS04595 PF02142 MGS-like domain LS838_RS04595 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LS838_RS04595 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LS838_RS04600 PF13740 ACT domain LS838_RS04605 PF05167 Uncharacterised ACR (DUF711) LS838_RS04610 PF05670 LS838_RS04610 LS838_RS04610 PF05833 Fibronectin-binding protein A N-terminus (FbpA) LS838_RS04615 PF02645 Uncharacterised protein, DegV family COG1307 LS838_RS04625 PF00892 EamA-like transporter family LS838_RS04630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LS838_RS04630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LS838_RS04635 PF00266 Aminotransferase class-V LS838_RS04640 PF00300 Histidine phosphatase superfamily (branch 1) LS838_RS04645 PF02687 LS838_RS04645 LS838_RS04660 PF00881 Nitroreductase family LS838_RS04665 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LS838_RS04665 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LS838_RS04670 PF01979 Amidohydrolase family LS838_RS04675 PF00589 Phage integrase family LS838_RS04675 PF13495 Phage integrase, N-terminal SAM-like domain LS838_RS04680 PF02595 Glycerate kinase family LS838_RS04685 PF10087 LS838_RS04685 LS838_RS04690 PF08238 Sel1 repeat LS838_RS04695 PF01385 LS838_RS04695 LS838_RS04695 PF07282 LS838_RS04695 LS838_RS04700 PF01797 Transposase IS200 like LS838_RS04730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LS838_RS04735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LS838_RS04740 PF01979 Amidohydrolase family LS838_RS04765 PF00107 Zinc-binding dehydrogenase LS838_RS04765 PF08240 Alcohol dehydrogenase GroES-like domain LS838_RS04770 PF02627 Carboxymuconolactone decarboxylase family LS838_RS04780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LS838_RS04780 PF03466 LysR substrate binding domain LS838_RS04785 PF00890 FAD binding domain LS838_RS04790 PF01385 LS838_RS04790 LS838_RS04790 PF07282 LS838_RS04790 LS838_RS04790 PF12323 LS838_RS04790 LS838_RS04800 PF13419 Haloacid dehalogenase-like hydrolase LS838_RS04805 PF14542 GCN5-related N-acetyl-transferase LS838_RS04815 PF00890 FAD binding domain LS838_RS04820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LS838_RS04820 PF03466 LysR substrate binding domain LS838_RS04825 PF02321 Outer membrane efflux protein LS838_RS04825 PF08428 LS838_RS04825 LS838_RS04840 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LS838_RS04845 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LS838_RS04850 PF01380 SIS domain LS838_RS04850 PF01418 Helix-turn-helix domain, rpiR family LS838_RS04865 PF01878 EVE domain LS838_RS04865 PF07728 AAA domain (dynein-related subfamily) LS838_RS04870 PF10117 LS838_RS04870 LS838_RS04875 PF03060 Nitronate monooxygenase LS838_RS04880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LS838_RS04890 PF08551 LS838_RS04890 LS838_RS04895 PF01554 MatE LS838_RS04910 PF00075 RNase H LS838_RS04915 PF00581 Rhodanese-like domain LS838_RS04920 PF00005 ABC transporter LS838_RS04920 PF00664 ABC transporter transmembrane region LS838_RS04925 PF00005 ABC transporter LS838_RS04925 PF00664 ABC transporter transmembrane region LS838_RS04930 PF12802 MarR family LS838_RS04935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LS838_RS04935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LS838_RS04945 PF00005 ABC transporter LS838_RS04945 PF00664 ABC transporter transmembrane region LS838_RS04950 PF00005 ABC transporter LS838_RS04955 PF13460 NADH(P)-binding LS838_RS04960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LS838_RS04960 PF03466 LysR substrate binding domain LS838_RS04970 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LS838_RS04985 PF01385 LS838_RS04985 LS838_RS04985 PF07282 LS838_RS04985 LS838_RS04985 PF12323 LS838_RS04985 LS838_RS05005 PF13558 Putative exonuclease SbcCD, C subunit LS838_RS05020 PF09664 LS838_RS05020 LS838_RS05020 PF11796 LS838_RS05020 LS838_RS05025 PF01370 NAD dependent epimerase/dehydratase family LS838_RS05030 PF02082 Transcriptional regulator LS838_RS05035 PF01987 Mitochondrial biogenesis AIM24 LS838_RS05040 PF00561 alpha/beta hydrolase fold LS838_RS05045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LS838_RS05050 PF08241 Methyltransferase domain LS838_RS05060 PF02142 MGS-like domain LS838_RS05060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LS838_RS05060 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LS838_RS05065 PF00117 Glutamine amidotransferase class-I LS838_RS05065 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LS838_RS05070 PF00990 GGDEF domain LS838_RS05070 PF04474 LS838_RS05070 LS838_RS05075 PF01554 MatE LS838_RS05080 PF13411 MerR HTH family regulatory protein LS838_RS05085 PF00589 Phage integrase family LS838_RS05090 PF00583 Acetyltransferase (GNAT) family LS838_RS05095 PF00005 ABC transporter LS838_RS05100 PF12698 ABC-2 family transporter protein LS838_RS05105 PF11391 LS838_RS05105 LS838_RS05115 PF01451 Low molecular weight phosphotyrosine protein phosphatase LS838_RS05125 PF00005 ABC transporter LS838_RS05130 PF02687 LS838_RS05130 LS838_RS05135 PF01243 Pyridoxamine 5'-phosphate oxidase LS838_RS05140 PF03466 LysR substrate binding domain LS838_RS05145 PF00890 FAD binding domain LS838_RS05150 PF01381 Helix-turn-helix LS838_RS05150 PF13274 LS838_RS05150 LS838_RS05155 PF15723 LS838_RS05155 LS838_RS05165 PF13302 Acetyltransferase (GNAT) domain LS838_RS05170 PF03217 LS838_RS05170 LS838_RS05175 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LS838_RS05180 PF00155 Aminotransferase class I and II LS838_RS05185 PF01113 Dihydrodipicolinate reductase, N-terminus LS838_RS05185 PF05173 Dihydrodipicolinate reductase, C-terminus LS838_RS05190 PF00701 Dihydrodipicolinate synthetase family LS838_RS05195 PF01546 Peptidase family M20/M25/M40 LS838_RS05195 PF07687 Peptidase dimerisation domain LS838_RS05200 PF00132 Bacterial transferase hexapeptide (six repeats) LS838_RS05200 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal LS838_RS05200 PF14602 Hexapeptide repeat of succinyl-transferase LS838_RS05205 PF00696 Amino acid kinase family LS838_RS05205 PF01842 ACT domain LS838_RS05210 PF01678 Diaminopimelate epimerase LS838_RS05225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LS838_RS05225 PF07992 Pyridine nucleotide-disulphide oxidoreductase LS838_RS05230 PF11457 LS838_RS05230 LS838_RS05235 PF04397 LytTr DNA-binding domain LS838_RS05240 PF00533 BRCA1 C Terminus (BRCT) domain LS838_RS05240 PF00929 Exonuclease LS838_RS05245 PF04237 YjbR LS838_RS05250 PF02698 DUF218 domain LS838_RS05255 PF13420 Acetyltransferase (GNAT) domain LS838_RS05275 PF02016 LD-carboxypeptidase LS838_RS05280 PF01189 NOL1/NOP2/sun family LS838_RS05280 PF13636 pre-rRNA processing and ribosome biogenesis LS838_RS05280 PF17125 LS838_RS05280 LS838_RS05280 PF17126 LS838_RS05280 LS838_RS05300 PF01470 Pyroglutamyl peptidase LS838_RS05305 PF13367 LS838_RS05305 LS838_RS05310 PF04204 Homoserine O-succinyltransferase LS838_RS05315 PF00171 Aldehyde dehydrogenase family LS838_RS05320 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS05320 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LS838_RS05325 PF00005 ABC transporter LS838_RS05330 PF02082 Transcriptional regulator LS838_RS05335 PF13460 NADH(P)-binding LS838_RS05340 PF01435 Peptidase family M48 LS838_RS05350 PF00082 Subtilase family LS838_RS05350 PF02225 PA domain LS838_RS05350 PF03217 LS838_RS05350 LS838_RS05350 PF06280 Fn3-like domain (DUF1034) LS838_RS05355 PF13508 Acetyltransferase (GNAT) domain LS838_RS05365 PF09335 LS838_RS05365 LS838_RS05370 PF03590 Aspartate-ammonia ligase LS838_RS05375 PF00152 tRNA synthetases class II (D, K and N) LS838_RS05375 PF01336 OB-fold nucleic acid binding domain LS838_RS05380 PF00132 Bacterial transferase hexapeptide (six repeats) LS838_RS05380 PF12464 Maltose acetyltransferase LS838_RS05385 PF00239 Resolvase, N terminal domain LS838_RS05385 PF00376 MerR family regulatory protein LS838_RS05395 PF02899 Phage integrase, N-terminal SAM-like domain LS838_RS05400 PF00717 Peptidase S24-like LS838_RS05405 PF00717 Peptidase S24-like LS838_RS05415 PF01546 Peptidase family M20/M25/M40 LS838_RS05415 PF07687 Peptidase dimerisation domain LS838_RS05420 PF01784 NIF3 (NGG1p interacting factor 3) LS838_RS05425 PF04816 Family of unknown function (DUF633) LS838_RS05430 PF00293 NUDIX domain LS838_RS05435 PF01551 Peptidase family M23 LS838_RS05440 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LS838_RS05440 PF02805 Metal binding domain of Ada LS838_RS05440 PF12833 Helix-turn-helix domain LS838_RS05445 PF00890 FAD binding domain LS838_RS05445 PF04205 FMN-binding domain LS838_RS05450 PF12833 Helix-turn-helix domain LS838_RS05465 PF05362 Lon protease (S16) C-terminal proteolytic domain LS838_RS05465 PF13337 LS838_RS05465 LS838_RS05470 PF08665 LS838_RS05470 LS838_RS05475 PF07669 Eco57I restriction-modification methylase LS838_RS05485 PF08747 Domain of unknown function (DUF1788) LS838_RS05490 PF08849 Putative inner membrane protein (DUF1819) LS838_RS05510 PF02384 N-6 DNA Methylase LS838_RS05515 PF06028 Alpha/beta hydrolase of unknown function (DUF915) LS838_RS05520 PF00326 Prolyl oligopeptidase family LS838_RS05525 PF07859 alpha/beta hydrolase fold LS838_RS05530 PF00990 GGDEF domain LS838_RS05535 PF02065 Melibiase LS838_RS05535 PF16874 LS838_RS05535 LS838_RS05535 PF16875 LS838_RS05535 LS838_RS05540 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LS838_RS05540 PF13347 MFS/sugar transport protein LS838_RS05545 PF02311 AraC-like ligand binding domain LS838_RS05545 PF12833 Helix-turn-helix domain LS838_RS05555 PF00232 Glycosyl hydrolase family 1 LS838_RS05560 PF00140 Sigma-70 factor, region 1 LS838_RS05560 PF04539 Sigma-70 region 3 LS838_RS05560 PF04542 Sigma-70 region 2 LS838_RS05560 PF04545 Sigma-70, region 4 LS838_RS05565 PF00140 Sigma-70 factor, region 1 LS838_RS05565 PF03979 Sigma-70 factor, region 1 LS838_RS05565 PF04539 Sigma-70 region 3 LS838_RS05565 PF04542 Sigma-70 region 2 LS838_RS05565 PF04545 Sigma-70, region 4 LS838_RS05570 PF00140 Sigma-70 factor, region 1 LS838_RS05570 PF04539 Sigma-70 region 3 LS838_RS05570 PF04542 Sigma-70 region 2 LS838_RS05570 PF04545 Sigma-70, region 4 LS838_RS05575 PF01807 CHC2 zinc finger LS838_RS05575 PF08275 DNA primase catalytic core, N-terminal domain LS838_RS05575 PF10410 DnaB-helicase binding domain of primase LS838_RS05575 PF13155 Toprim-like LS838_RS05580 PF02092 LS838_RS05580 LS838_RS05585 PF02091 Glycyl-tRNA synthetase alpha subunit LS838_RS05590 PF02565 Recombination protein O C terminal LS838_RS05590 PF11967 Recombination protein O N terminal LS838_RS05595 PF01926 50S ribosome-binding GTPase LS838_RS05595 PF07650 KH domain LS838_RS05600 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LS838_RS05605 PF02130 Uncharacterized protein family UPF0054 LS838_RS05610 PF02562 PhoH-like protein LS838_RS05615 PF01165 Ribosomal protein S21 LS838_RS05620 PF03618 LS838_RS05620 LS838_RS05630 PF02588 LS838_RS05630 LS838_RS05630 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LS838_RS05640 PF00155 Aminotransferase class I and II LS838_RS05645 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LS838_RS05645 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LS838_RS05660 PF08428 LS838_RS05660 LS838_RS05665 PF08428 LS838_RS05665 LS838_RS05670 PF01263 Aldose 1-epimerase LS838_RS05675 PF07724 AAA domain (Cdc48 subfamily) LS838_RS05675 PF10431 C-terminal, D2-small domain, of ClpB protein LS838_RS05680 PF00227 Proteasome subunit LS838_RS05685 PF00589 Phage integrase family LS838_RS05685 PF02899 Phage integrase, N-terminal SAM-like domain LS838_RS05690 PF01134 Glucose inhibited division protein A LS838_RS05695 PF01131 DNA topoisomerase LS838_RS05695 PF01396 LS838_RS05695 LS838_RS05695 PF01751 Toprim domain LS838_RS05700 PF02481 DNA recombination-mediator protein A LS838_RS05705 PF01351 Ribonuclease HII LS838_RS05710 PF01926 50S ribosome-binding GTPase LS838_RS05715 PF06855 Protein of unknown function (DUF1250) LS838_RS05720 PF02645 Uncharacterised protein, DegV family COG1307 LS838_RS05725 PF03006 LS838_RS05725 LS838_RS05735 PF02588 LS838_RS05735 LS838_RS05735 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LS838_RS05745 PF00563 EAL domain LS838_RS05760 PF00005 ABC transporter LS838_RS05760 PF00664 ABC transporter transmembrane region LS838_RS05765 PF00005 ABC transporter LS838_RS05765 PF00664 ABC transporter transmembrane region LS838_RS05770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LS838_RS05770 PF03466 LysR substrate binding domain LS838_RS05780 PF01569 PAP2 superfamily LS838_RS05785 PF02645 Uncharacterised protein, DegV family COG1307 LS838_RS05790 PF00113 Enolase, C-terminal TIM barrel domain LS838_RS05790 PF03952 Enolase, N-terminal domain LS838_RS05795 PF14014 LS838_RS05795 LS838_RS05800 PF00005 ABC transporter LS838_RS05805 PF00497 Bacterial extracellular solute-binding proteins, family 3 LS838_RS05805 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS05810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LS838_RS05810 PF03466 LysR substrate binding domain LS838_RS05815 PF00122 E1-E2 ATPase LS838_RS05815 PF00690 Cation transporter/ATPase, N-terminus LS838_RS05815 PF00702 haloacid dehalogenase-like hydrolase LS838_RS05825 PF01594 LS838_RS05825 LS838_RS05830 PF01063 Aminotransferase class IV LS838_RS05835 PF01545 Cation efflux family LS838_RS05835 PF16916 LS838_RS05835 LS838_RS05840 PF01022 Bacterial regulatory protein, arsR family LS838_RS05845 PF00156 Phosphoribosyl transferase domain LS838_RS05850 PF01368 DHH family LS838_RS05850 PF02272 DHHA1 domain LS838_RS05850 PF10141 LS838_RS05850 LS838_RS05855 PF04203 Sortase family LS838_RS05860 PF00009 Elongation factor Tu GTP binding domain LS838_RS05860 PF00679 Elongation factor G C-terminus LS838_RS05860 PF03144 Elongation factor Tu domain 2 LS838_RS05860 PF06421 GTP-binding protein LepA C-terminus LS838_RS05865 PF00226 DnaJ domain LS838_RS05865 PF00684 DnaJ central domain LS838_RS05865 PF01556 DnaJ C terminal domain LS838_RS05870 PF00012 Hsp70 protein LS838_RS05875 PF01025 GrpE LS838_RS05880 PF01628 HrcA protein C terminal domain LS838_RS05880 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LS838_RS05885 PF01687 Riboflavin kinase LS838_RS05885 PF06574 FAD synthetase LS838_RS05890 PF01509 TruB family pseudouridylate synthase (N terminal domain) LS838_RS05890 PF16198 LS838_RS05890 LS838_RS05895 PF02033 Ribosome-binding factor A LS838_RS05900 PF00009 Elongation factor Tu GTP binding domain LS838_RS05900 PF04760 Translation initiation factor IF-2, N-terminal region LS838_RS05900 PF11987 Translation-initiation factor 2 LS838_RS05905 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LS838_RS05910 PF04296 Protein of unknown function (DUF448) LS838_RS05915 PF08529 NusA N-terminal domain LS838_RS05915 PF13184 NusA-like KH domain LS838_RS05920 PF02576 Uncharacterised BCR, YhbC family COG0779 LS838_RS05925 PF00929 Exonuclease LS838_RS05925 PF02811 PHP domain LS838_RS05925 PF07733 Bacterial DNA polymerase III alpha subunit LS838_RS05925 PF11490 LS838_RS05925 LS838_RS05925 PF14480 LS838_RS05925 LS838_RS05925 PF14579 Helix-hairpin-helix motif LS838_RS05930 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LS838_RS05930 PF03129 Anticodon binding domain LS838_RS05930 PF04073 Aminoacyl-tRNA editing domain LS838_RS05935 PF02163 Peptidase family M50 LS838_RS05935 PF13180 PDZ domain LS838_RS05940 PF01148 Cytidylyltransferase family LS838_RS05945 PF01255 Putative undecaprenyl diphosphate synthase LS838_RS05950 PF01765 Ribosome recycling factor LS838_RS05955 PF00696 Amino acid kinase family LS838_RS05960 PF00889 Elongation factor TS LS838_RS05965 PF00318 Ribosomal protein S2 LS838_RS05970 PF01541 GIY-YIG catalytic domain LS838_RS05970 PF05175 Methyltransferase small domain LS838_RS05975 PF01553 Acyltransferase LS838_RS05980 PF01118 Semialdehyde dehydrogenase, NAD binding domain LS838_RS05980 PF02774 Semialdehyde dehydrogenase, dimerisation domain LS838_RS05985 PF00696 Amino acid kinase family LS838_RS05995 PF01842 ACT domain LS838_RS06000 PF00005 ABC transporter LS838_RS06000 PF00664 ABC transporter transmembrane region LS838_RS06005 PF00005 ABC transporter LS838_RS06005 PF00664 ABC transporter transmembrane region LS838_RS06010 PF03672 LS838_RS06010 LS838_RS06015 PF05979 Bacterial protein of unknown function (DUF896) LS838_RS06020 PF00717 Peptidase S24-like LS838_RS06020 PF01726 LexA DNA binding domain LS838_RS06025 PF06800 LS838_RS06025 LS838_RS06030 PF00497 Bacterial extracellular solute-binding proteins, family 3 LS838_RS06040 PF00270 DEAD/DEAH box helicase LS838_RS06040 PF00271 Helicase conserved C-terminal domain LS838_RS06045 PF10923 LS838_RS06045 LS838_RS06050 PF13208 LS838_RS06050 LS838_RS06050 PF15615 LS838_RS06050 LS838_RS06055 PF00149 Calcineurin-like phosphoesterase LS838_RS06055 PF02872 5'-nucleotidase, C-terminal domain LS838_RS06060 PF01245 Ribosomal protein L19 LS838_RS06065 PF00176 SNF2 family N-terminal domain LS838_RS06065 PF00271 Helicase conserved C-terminal domain LS838_RS06065 PF08455 LS838_RS06065 LS838_RS06070 PF01746 tRNA (Guanine-1)-methyltransferase LS838_RS06075 PF01782 RimM N-terminal domain LS838_RS06075 PF05239 PRC-barrel domain LS838_RS06080 PF00886 Ribosomal protein S16 LS838_RS06085 PF00448 SRP54-type protein, GTPase domain LS838_RS06085 PF02881 SRP54-type protein, helical bundle domain LS838_RS06085 PF02978 Signal peptide binding domain LS838_RS06090 PF04297 Putative helix-turn-helix protein, YlxM / p13 like LS838_RS06095 PF03577 LS838_RS06095 LS838_RS06100 PF00448 SRP54-type protein, GTPase domain LS838_RS06100 PF02881 SRP54-type protein, helical bundle domain LS838_RS06105 PF02463 RecF/RecN/SMC N terminal domain LS838_RS06105 PF06470 SMC proteins Flexible Hinge Domain LS838_RS06110 PF00035 Double-stranded RNA binding motif LS838_RS06110 PF14622 Ribonuclease-III-like LS838_RS06115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LS838_RS06120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LS838_RS06125 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS06130 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS06135 PF00005 ABC transporter LS838_RS06135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LS838_RS06140 PF00005 ABC transporter LS838_RS06140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LS838_RS06145 PF00550 Phosphopantetheine attachment site LS838_RS06150 PF02504 Fatty acid synthesis protein LS838_RS06155 PF00270 DEAD/DEAH box helicase LS838_RS06155 PF00271 Helicase conserved C-terminal domain LS838_RS06155 PF17191 LS838_RS06155 LS838_RS06160 PF02734 DAK2 domain LS838_RS06160 PF13684 Dihydroxyacetone kinase family LS838_RS06165 PF03780 LS838_RS06165 LS838_RS06170 PF00830 Ribosomal L28 family LS838_RS06175 PF00005 ABC transporter LS838_RS06175 PF00664 ABC transporter transmembrane region LS838_RS06180 PF00746 LS838_RS06180 LS838_RS06195 PF04263 Thiamin pyrophosphokinase, catalytic domain LS838_RS06195 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain LS838_RS06200 PF03193 Protein of unknown function, DUF258 LS838_RS06200 PF16745 LS838_RS06200 LS838_RS06205 PF00069 Protein kinase domain LS838_RS06205 PF03793 PASTA domain LS838_RS06210 PF13672 Protein phosphatase 2C LS838_RS06215 PF01029 NusB family LS838_RS06215 PF01189 NOL1/NOP2/sun family LS838_RS06220 PF00551 Formyl transferase LS838_RS06220 PF02911 Formyl transferase, C-terminal domain LS838_RS06225 PF00271 Helicase conserved C-terminal domain LS838_RS06225 PF04851 Type III restriction enzyme, res subunit LS838_RS06230 PF01192 RNA polymerase Rpb6 LS838_RS06235 PF00625 Guanylate kinase LS838_RS06250 PF02463 RecF/RecN/SMC N terminal domain LS838_RS06255 PF01728 FtsJ-like methyltransferase LS838_RS06260 PF00348 Polyprenyl synthetase LS838_RS06265 PF02609 Exonuclease VII small subunit LS838_RS06270 PF02601 LS838_RS06270 LS838_RS06270 PF13742 LS838_RS06270 LS838_RS06275 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LS838_RS06275 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LS838_RS06280 PF01029 NusB family LS838_RS06285 PF03780 LS838_RS06285 LS838_RS06290 PF01132 Elongation factor P (EF-P) OB domain LS838_RS06290 PF08207 Elongation factor P (EF-P) KOW-like domain LS838_RS06290 PF09285 Elongation factor P, C-terminal LS838_RS06295 PF00557 Metallopeptidase family M24 LS838_RS06295 PF01321 Creatinase/Prolidase N-terminal domain LS838_RS06300 PF01016 Ribosomal L27 protein LS838_RS06305 PF00829 Ribosomal prokaryotic L21 protein LS838_RS06310 PF03960 ArsC family LS838_RS06315 PF01053 Cys/Met metabolism PLP-dependent enzyme LS838_RS06320 PF01053 Cys/Met metabolism PLP-dependent enzyme LS838_RS06325 PF00005 ABC transporter LS838_RS06330 PF00005 ABC transporter LS838_RS06330 PF12399 Branched-chain amino acid ATP-binding cassette transporter LS838_RS06335 PF02653 LS838_RS06335 LS838_RS06340 PF02653 LS838_RS06340 LS838_RS06345 PF13458 Periplasmic binding protein LS838_RS06350 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LS838_RS06350 PF02843 Phosphoribosylglycinamide synthetase, C domain LS838_RS06350 PF02844 Phosphoribosylglycinamide synthetase, N domain LS838_RS06355 PF01808 AICARFT/IMPCHase bienzyme LS838_RS06355 PF02142 MGS-like domain LS838_RS06360 PF00551 Formyl transferase LS838_RS06365 PF00586 AIR synthase related protein, N-terminal domain LS838_RS06365 PF02769 AIR synthase related protein, C-terminal domain LS838_RS06370 PF00156 Phosphoribosyl transferase domain LS838_RS06370 PF13537 Glutamine amidotransferase domain LS838_RS06375 PF00586 AIR synthase related protein, N-terminal domain LS838_RS06375 PF02769 AIR synthase related protein, C-terminal domain LS838_RS06380 PF13507 CobB/CobQ-like glutamine amidotransferase domain LS838_RS06385 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LS838_RS06390 PF01259 SAICAR synthetase LS838_RS06395 PF00206 Lyase LS838_RS06395 PF10397 Adenylosuccinate lyase C-terminus LS838_RS06400 PF02222 ATP-grasp domain LS838_RS06400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LS838_RS06405 PF00731 AIR carboxylase LS838_RS06410 PF09860 LS838_RS06410 LS838_RS06415 PF07690 Major Facilitator Superfamily LS838_RS06435 PF01131 DNA topoisomerase LS838_RS06435 PF01751 Toprim domain LS838_RS06435 PF13342 LS838_RS06435 LS838_RS06445 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LS838_RS06445 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LS838_RS06445 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal LS838_RS06455 PF04204 Homoserine O-succinyltransferase LS838_RS06460 PF00291 Pyridoxal-phosphate dependent enzyme LS838_RS06465 PF00962 Adenosine/AMP deaminase LS838_RS06470 PF08797 HIRAN domain LS838_RS06475 PF02645 Uncharacterised protein, DegV family COG1307 LS838_RS06480 PF01717 Cobalamin-independent synthase, Catalytic domain LS838_RS06485 PF01381 Helix-turn-helix LS838_RS06485 PF13127 LS838_RS06485 LS838_RS06495 PF06100 Streptococcal 67 kDa myosin-cross-reactive antigen like family LS838_RS06505 PF07690 Major Facilitator Superfamily LS838_RS06510 PF00120 Glutamine synthetase, catalytic domain LS838_RS06510 PF03951 Glutamine synthetase, beta-Grasp domain LS838_RS06515 PF06838 Methionine gamma-lyase LS838_RS06520 PF01715 IPP transferase LS838_RS06525 PF00581 Rhodanese-like domain LS838_RS06530 PF06014 Bacterial protein of unknown function (DUF910) LS838_RS06535 PF01694 Rhomboid family LS838_RS06540 PF01812 5-formyltetrahydrofolate cyclo-ligase family LS838_RS06545 PF00471 Ribosomal protein L33 LS838_RS06550 PF00905 Penicillin binding protein transpeptidase domain LS838_RS06550 PF03717 Penicillin-binding Protein dimerisation domain LS838_RS06555 PF09586 LS838_RS06555 LS838_RS06560 PF01272 Transcription elongation factor, GreA/GreB, C-term LS838_RS06560 PF03449 Transcription elongation factor, N-terminal LS838_RS06565 PF01588 Putative tRNA binding domain LS838_RS06565 PF03147 Ferredoxin-fold anticodon binding domain LS838_RS06565 PF03483 B3/4 domain LS838_RS06565 PF03484 tRNA synthetase B5 domain LS838_RS06570 PF01409 tRNA synthetases class II core domain (F) LS838_RS06570 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LS838_RS06575 PF01638 HxlR-like helix-turn-helix LS838_RS06580 PF00588 SpoU rRNA Methylase family LS838_RS06580 PF08032 RNA 2'-O ribose methyltransferase substrate binding LS838_RS06585 PF00708 Acylphosphatase LS838_RS06590 PF02096 60Kd inner membrane protein LS838_RS06595 PF00512 His Kinase A (phospho-acceptor) domain LS838_RS06595 PF00672 HAMP domain LS838_RS06595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LS838_RS06600 PF00072 Response regulator receiver domain LS838_RS06600 PF00486 Transcriptional regulatory protein, C terminal LS838_RS06605 PF02620 LS838_RS06605 LS838_RS06610 PF05636 HIGH Nucleotidyl Transferase LS838_RS06615 PF02410 Oligomerisation domain LS838_RS06620 PF01966 HD domain LS838_RS06625 PF01467 Cytidylyltransferase LS838_RS06630 PF01926 50S ribosome-binding GTPase LS838_RS06635 PF00453 Ribosomal protein L20 LS838_RS06640 PF01632 Ribosomal protein L35 LS838_RS06645 PF00707 Translation initiation factor IF-3, C-terminal domain LS838_RS06645 PF05198 Translation initiation factor IF-3, N-terminal domain LS838_RS06660 PF13518 Helix-turn-helix domain LS838_RS06665 PF00665 Integrase core domain LS838_RS06665 PF13276 LS838_RS06665 LS838_RS06670 PF03596 LS838_RS06670 LS838_RS06680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LS838_RS06680 PF02824 TGS domain LS838_RS06680 PF03129 Anticodon binding domain LS838_RS06680 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LS838_RS06685 PF01695 IstB-like ATP binding protein LS838_RS06685 PF07319 Primosomal protein DnaI N-terminus LS838_RS06690 PF07261 Replication initiation and membrane attachment LS838_RS06695 PF03477 ATP cone domain LS838_RS06700 PF01121 Dephospho-CoA kinase LS838_RS06705 PF07282 LS838_RS06705 LS838_RS06710 PF00239 Resolvase, N terminal domain LS838_RS06710 PF00376 MerR family regulatory protein LS838_RS06715 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LS838_RS06715 PF06827 Zinc finger found in FPG and IleRS LS838_RS06715 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LS838_RS06720 PF00476 DNA polymerase family A LS838_RS06720 PF01367 5'-3' exonuclease, C-terminal SAM fold LS838_RS06720 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LS838_RS06725 PF07690 Major Facilitator Superfamily LS838_RS06740 PF00665 Integrase core domain LS838_RS06740 PF13936 Helix-turn-helix domain LS838_RS06745 PF03389 MobA/MobL family LS838_RS06750 PF00890 FAD binding domain LS838_RS06755 PF12833 Helix-turn-helix domain LS838_RS06760 PF01225 Mur ligase family, catalytic domain LS838_RS06760 PF02875 Mur ligase family, glutamate ligase domain LS838_RS06760 PF08245 Mur ligase middle domain LS838_RS06765 PF01588 Putative tRNA binding domain LS838_RS06765 PF14794 Domain of unknown function (DUF4479) LS838_RS06770 PF00085 Thioredoxin LS838_RS06775 PF02390 Putative methyltransferase LS838_RS06780 PF05975 LS838_RS06780 LS838_RS06785 PF00005 ABC transporter LS838_RS06790 PF01230 HIT domain LS838_RS06795 PF12732 LS838_RS06795 LS838_RS06800 PF01180 Dihydroorotate dehydrogenase LS838_RS06805 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LS838_RS06810 PF00156 Phosphoribosyl transferase domain LS838_RS06815 PF13616 PPIC-type PPIASE domain LS838_RS06820 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LS838_RS06820 PF01264 Chorismate synthase LS838_RS06825 PF01202 Shikimate kinase LS838_RS06830 PF01966 HD domain LS838_RS06835 PF13514 AAA domain LS838_RS06840 PF12850 Calcineurin-like phosphoesterase superfamily domain LS838_RS06845 PF06133 Protein of unknown function (DUF964) LS838_RS06850 PF00905 Penicillin binding protein transpeptidase domain LS838_RS06850 PF00912 Transglycosylase LS838_RS06855 PF00849 RNA pseudouridylate synthase LS838_RS06860 PF01116 Fructose-bisphosphate aldolase class-II LS838_RS06865 PF03734 L,D-transpeptidase catalytic domain LS838_RS06870 PF04203 Sortase family LS838_RS06875 PF02324 Glycosyl hydrolase family 70 LS838_RS06880 PF04650 LS838_RS06880 LS838_RS06895 PF03734 L,D-transpeptidase catalytic domain LS838_RS06895 PF08428 LS838_RS06895 LS838_RS06900 PF01256 Carbohydrate kinase LS838_RS06905 PF00768 D-alanyl-D-alanine carboxypeptidase LS838_RS06925 PF00391 PEP-utilising enzyme, mobile domain LS838_RS06925 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LS838_RS06925 PF02896 PEP-utilising enzyme, TIM barrel domain LS838_RS06930 PF01943 LS838_RS06930 LS838_RS06930 PF14667 Polysaccharide biosynthesis C-terminal domain LS838_RS06935 PF00133 tRNA synthetases class I (I, L, M and V) LS838_RS06935 PF08264 Anticodon-binding domain of tRNA LS838_RS06935 PF09334 tRNA synthetases class I (M) LS838_RS06935 PF13603 Leucyl-tRNA synthetase, Domain 2 LS838_RS06940 PF01569 PAP2 superfamily LS838_RS06945 PF07690 Major Facilitator Superfamily LS838_RS06950 PF00438 S-adenosylmethionine synthetase, N-terminal domain LS838_RS06950 PF02772 S-adenosylmethionine synthetase, central domain LS838_RS06950 PF02773 S-adenosylmethionine synthetase, C-terminal domain LS838_RS07005 PF07992 Pyridine nucleotide-disulphide oxidoreductase LS838_RS07010 PF09335 LS838_RS07010 LS838_RS07015 PF07314 LS838_RS07015 LS838_RS07020 PF13242 HAD-hyrolase-like LS838_RS07020 PF13344 Haloacid dehalogenase-like hydrolase LS838_RS07025 PF06265 Protein of unknown function (DUF1027) LS838_RS07040 PF00356 Bacterial regulatory proteins, lacI family LS838_RS07040 PF13377 Periplasmic binding protein-like domain LS838_RS07045 PF00557 Metallopeptidase family M24 LS838_RS07045 PF01321 Creatinase/Prolidase N-terminal domain LS838_RS07060 PF06103 LS838_RS07060 LS838_RS07065 PF00924 Mechanosensitive ion channel LS838_RS07070 PF01725 Ham1 family LS838_RS07075 PF10702 Protein of unknown function (DUF2507) LS838_RS07080 PF00085 Thioredoxin LS838_RS07085 PF00488 MutS domain V LS838_RS07085 PF01713 Smr domain LS838_RS07090 PF06949 LS838_RS07090 LS838_RS07095 PF03652 Uncharacterised protein family (UPF0081) LS838_RS07100 PF06135 LS838_RS07100 LS838_RS07105 PF01411 tRNA synthetases class II (A) LS838_RS07105 PF02272 DHHA1 domain LS838_RS07105 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LS838_RS07110 PF00270 DEAD/DEAH box helicase LS838_RS07110 PF00271 Helicase conserved C-terminal domain LS838_RS07115 PF01368 DHH family LS838_RS07115 PF02272 DHHA1 domain LS838_RS07120 PF00817 impB/mucB/samB family LS838_RS07120 PF11798 IMS family HHH motif LS838_RS07120 PF11799 impB/mucB/samB family C-terminal domain LS838_RS07125 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LS838_RS07125 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LS838_RS07130 PF02699 Preprotein translocase subunit LS838_RS07135 PF05491 Holliday junction DNA helicase ruvB C-terminus LS838_RS07135 PF05496 Holliday junction DNA helicase ruvB N-terminus LS838_RS07140 PF01330 RuvA N terminal domain LS838_RS07140 PF07499 RuvA, C-terminal domain LS838_RS07140 PF14520 Helix-hairpin-helix domain LS838_RS07145 PF01119 DNA mismatch repair protein, C-terminal domain LS838_RS07145 PF08676 MutL C terminal dimerisation domain LS838_RS07145 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LS838_RS07150 PF00488 MutS domain V LS838_RS07150 PF01624 MutS domain I LS838_RS07150 PF05188 MutS domain II LS838_RS07150 PF05190 MutS family domain IV LS838_RS07150 PF05192 MutS domain III LS838_RS07155 PF00118 TCP-1/cpn60 chaperonin family LS838_RS07160 PF00166 Chaperonin 10 Kd subunit LS838_RS07165 PF02629 CoA binding domain LS838_RS07165 PF06971 Putative DNA-binding protein N-terminus LS838_RS07170 PF00005 ABC transporter LS838_RS07170 PF12848 ABC transporter LS838_RS07170 PF16326 LS838_RS07170 LS838_RS07175 PF00814 Glycoprotease family LS838_RS07180 PF00583 Acetyltransferase (GNAT) family LS838_RS07185 PF00814 Glycoprotease family LS838_RS07190 PF12822 Protein of unknown function (DUF3816) LS838_RS07195 PF01643 Acyl-ACP thioesterase LS838_RS07200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LS838_RS07205 PF06156 LS838_RS07205 LS838_RS07210 PF13177 DNA polymerase III, delta subunit LS838_RS07215 PF06153 Protein of unknown function (DUF970) LS838_RS07220 PF02223 Thymidylate kinase LS838_RS07225 PF10704 LS838_RS07225 LS838_RS07230 PF02132 RecR protein LS838_RS07230 PF13662 Toprim domain LS838_RS07235 PF02575 YbaB/EbfC DNA-binding family LS838_RS07240 PF13177 DNA polymerase III, delta subunit LS838_RS07250 PF14437 LS838_RS07250 LS838_RS07255 PF05175 Methyltransferase small domain LS838_RS07260 PF00156 Phosphoribosyl transferase domain LS838_RS07275 PF03217 LS838_RS07275 LS838_RS07290 PF07745 Glycosyl hydrolase family 53 LS838_RS07295 PF07745 Glycosyl hydrolase family 53 LS838_RS07300 PF00933 Glycosyl hydrolase family 3 N terminal domain LS838_RS07305 PF00144 Beta-lactamase LS838_RS07310 PF00144 Beta-lactamase LS838_RS07315 PF00216 Bacterial DNA-binding protein LS838_RS07320 PF02502 Ribose/Galactose Isomerase LS838_RS07325 PF04205 FMN-binding domain LS838_RS07330 PF02424 ApbE family LS838_RS07335 PF08022 LS838_RS07335 LS838_RS07340 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LS838_RS07345 PF00480 ROK family LS838_RS07350 PF00005 ABC transporter LS838_RS07350 PF03459 TOBE domain LS838_RS07355 PF00251 Glycosyl hydrolases family 32 N-terminal domain LS838_RS07360 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS07365 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS07370 PF13416 Bacterial extracellular solute-binding protein LS838_RS07375 PF00356 Bacterial regulatory proteins, lacI family LS838_RS07375 PF13377 Periplasmic binding protein-like domain LS838_RS07380 PF00542 Ribosomal protein L7/L12 C-terminal domain LS838_RS07380 PF16320 LS838_RS07380 LS838_RS07385 PF00466 Ribosomal protein L10 LS838_RS07395 PF00909 Ammonium Transporter Family LS838_RS07400 PF00535 Glycosyl transferase family 2 LS838_RS07405 PF00687 Ribosomal protein L1p/L10e family LS838_RS07410 PF00298 Ribosomal protein L11, RNA binding domain LS838_RS07410 PF03946 Ribosomal protein L11, N-terminal domain LS838_RS07415 PF02357 Transcription termination factor nusG LS838_RS07420 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LS838_RS07425 PF00471 Ribosomal protein L33 LS838_RS07430 PF02779 Transketolase, pyrimidine binding domain LS838_RS07430 PF02780 Transketolase, C-terminal domain LS838_RS07430 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LS838_RS07435 PF12695 Alpha/beta hydrolase family LS838_RS07445 PF04542 Sigma-70 region 2 LS838_RS07450 PF00588 SpoU rRNA Methylase family LS838_RS07450 PF08032 RNA 2'-O ribose methyltransferase substrate binding LS838_RS07455 PF00636 Ribonuclease III domain LS838_RS07460 PF01406 tRNA synthetases class I (C) catalytic domain LS838_RS07460 PF09190 DALR domain LS838_RS07465 PF00293 NUDIX domain LS838_RS07470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LS838_RS07475 PF01546 Peptidase family M20/M25/M40 LS838_RS07480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LS838_RS07480 PF03466 LysR substrate binding domain LS838_RS07485 PF03601 LS838_RS07485 LS838_RS07490 PF00749 tRNA synthetases class I (E and Q), catalytic domain LS838_RS07500 PF00005 ABC transporter LS838_RS07505 PF00392 Bacterial regulatory proteins, gntR family LS838_RS07510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LS838_RS07515 PF00293 NUDIX domain LS838_RS07520 PF02222 ATP-grasp domain LS838_RS07535 PF07690 Major Facilitator Superfamily LS838_RS07540 PF00557 Metallopeptidase family M24 LS838_RS07545 PF00557 Metallopeptidase family M24 LS838_RS07550 PF01321 Creatinase/Prolidase N-terminal domain LS838_RS07565 PF07155 ECF-type riboflavin transporter, S component LS838_RS07570 PF00171 Aldehyde dehydrogenase family LS838_RS07575 PF02361 Cobalt transport protein LS838_RS07580 PF00005 ABC transporter LS838_RS07580 PF12558 LS838_RS07580 LS838_RS07585 PF07155 ECF-type riboflavin transporter, S component LS838_RS07590 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase LS838_RS07595 PF00324 Amino acid permease LS838_RS07610 PF00392 Bacterial regulatory proteins, gntR family LS838_RS07660 PF00563 EAL domain LS838_RS07670 PF01501 Glycosyl transferase family 8 LS838_RS07675 PF13481 AAA domain LS838_RS07675 PF13541 Subunit ChlI of Mg-chelatase LS838_RS07680 PF00692 dUTPase LS838_RS07690 PF03051 Peptidase C1-like family LS838_RS07695 PF00890 FAD binding domain LS838_RS07695 PF04205 FMN-binding domain LS838_RS07700 PF13671 AAA domain LS838_RS07705 PF07977 FabA-like domain LS838_RS07710 PF00300 Histidine phosphatase superfamily (branch 1) LS838_RS07725 PF00300 Histidine phosphatase superfamily (branch 1) LS838_RS07730 PF01925 LS838_RS07730 LS838_RS07735 PF01965 DJ-1/PfpI family LS838_RS07740 PF00583 Acetyltransferase (GNAT) family LS838_RS07745 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LS838_RS07745 PF13378 Enolase C-terminal domain-like LS838_RS07750 PF13354 Beta-lactamase enzyme family LS838_RS07755 PF01418 Helix-turn-helix domain, rpiR family LS838_RS07760 PF01546 Peptidase family M20/M25/M40 LS838_RS07765 PF00324 Amino acid permease LS838_RS07770 PF00455 LS838_RS07770 LS838_RS07770 PF08220 DeoR-like helix-turn-helix domain LS838_RS07775 PF00288 GHMP kinases N terminal domain LS838_RS07775 PF08544 GHMP kinases C terminal LS838_RS07775 PF10509 Galactokinase galactose-binding signature LS838_RS07780 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LS838_RS07780 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LS838_RS07785 PF00206 Lyase LS838_RS07785 PF10415 Fumarase C C-terminus LS838_RS07820 PF00288 GHMP kinases N terminal domain LS838_RS07820 PF08544 GHMP kinases C terminal LS838_RS07825 PF00291 Pyridoxal-phosphate dependent enzyme LS838_RS07825 PF14821 Threonine synthase N terminus LS838_RS07845 PF00583 Acetyltransferase (GNAT) family LS838_RS07855 PF00356 Bacterial regulatory proteins, lacI family LS838_RS07855 PF13377 Periplasmic binding protein-like domain LS838_RS07860 PF00251 Glycosyl hydrolases family 32 N-terminal domain LS838_RS07860 PF08244 Glycosyl hydrolases family 32 C terminal LS838_RS07865 PF07282 LS838_RS07865 LS838_RS07870 PF00239 Resolvase, N terminal domain LS838_RS07870 PF00376 MerR family regulatory protein LS838_RS07875 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LS838_RS07875 PF00367 phosphotransferase system, EIIB LS838_RS07875 PF02378 Phosphotransferase system, EIIC LS838_RS07880 PF00365 Phosphofructokinase LS838_RS07885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LS838_RS07885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LS838_RS07885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LS838_RS07885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LS838_RS07890 PF07282 LS838_RS07890 LS838_RS07895 PF00239 Resolvase, N terminal domain LS838_RS07895 PF00376 MerR family regulatory protein LS838_RS07900 PF00128 Alpha amylase, catalytic domain LS838_RS07905 PF00343 Carbohydrate phosphorylase LS838_RS07910 PF00534 Glycosyl transferases group 1 LS838_RS07910 PF08323 Starch synthase catalytic domain LS838_RS07915 PF00483 Nucleotidyl transferase LS838_RS07920 PF00483 Nucleotidyl transferase LS838_RS07925 PF00128 Alpha amylase, catalytic domain LS838_RS07925 PF02806 Alpha amylase, C-terminal all-beta domain LS838_RS07925 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LS838_RS07930 PF06803 LS838_RS07930 LS838_RS07935 PF03306 Alpha-acetolactate decarboxylase LS838_RS07950 PF00128 Alpha amylase, catalytic domain LS838_RS07955 PF07690 Major Facilitator Superfamily LS838_RS07960 PF01381 Helix-turn-helix LS838_RS07970 PF00271 Helicase conserved C-terminal domain LS838_RS07970 PF04851 Type III restriction enzyme, res subunit LS838_RS07970 PF11907 LS838_RS07970 LS838_RS07970 PF13091 PLD-like domain LS838_RS07975 PF01370 NAD dependent epimerase/dehydratase family LS838_RS07980 PF00877 NlpC/P60 family LS838_RS07980 PF08239 Bacterial SH3 domain LS838_RS07985 PF00324 Amino acid permease LS838_RS07995 PF06115 LS838_RS07995 LS838_RS08000 PF03613 LS838_RS08000 LS838_RS08005 PF03609 LS838_RS08005 LS838_RS08010 PF03610 PTS system fructose IIA component LS838_RS08010 PF03830 PTS system sorbose subfamily IIB component LS838_RS08020 PF03553 LS838_RS08020 LS838_RS08040 PF13673 Acetyltransferase (GNAT) domain LS838_RS08045 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LS838_RS08055 PF01380 SIS domain LS838_RS08055 PF01418 Helix-turn-helix domain, rpiR family LS838_RS08060 PF00367 phosphotransferase system, EIIB LS838_RS08060 PF02378 Phosphotransferase system, EIIC LS838_RS08065 PF02056 Family 4 glycosyl hydrolase LS838_RS08065 PF11975 Family 4 glycosyl hydrolase C-terminal domain LS838_RS08070 PF01668 SmpB protein LS838_RS08075 PF00575 S1 RNA binding domain LS838_RS08075 PF00773 RNB domain LS838_RS08075 PF08206 Ribonuclease B OB domain LS838_RS08080 PF03840 Preprotein translocase SecG subunit LS838_RS08085 PF00884 Sulfatase LS838_RS08090 PF03706 LS838_RS08090 LS838_RS08095 PF00534 Glycosyl transferases group 1 LS838_RS08095 PF13439 Glycosyltransferase Family 4 LS838_RS08100 PF00534 Glycosyl transferases group 1 LS838_RS08100 PF13439 Glycosyltransferase Family 4 LS838_RS08235 PF13520 Amino acid permease LS838_RS08240 PF02274 Amidinotransferase LS838_RS08245 PF00696 Amino acid kinase family LS838_RS08250 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LS838_RS08250 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LS838_RS08255 PF00072 Response regulator receiver domain LS838_RS08255 PF08664 LS838_RS08255 LS838_RS08260 PF03483 B3/4 domain LS838_RS08265 PF07969 Amidohydrolase family LS838_RS08295 PF11738 Protein of unknown function (DUF3298) LS838_RS08300 PF04542 Sigma-70 region 2 LS838_RS08305 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LS838_RS08305 PF02403 Seryl-tRNA synthetase N-terminal domain LS838_RS08310 PF13302 Acetyltransferase (GNAT) domain LS838_RS08315 PF09335 LS838_RS08315 LS838_RS08320 PF07859 alpha/beta hydrolase fold LS838_RS08325 PF01381 Helix-turn-helix LS838_RS08330 PF05014 Nucleoside 2-deoxyribosyltransferase LS838_RS08335 PF00117 Glutamine amidotransferase class-I LS838_RS08340 PF00171 Aldehyde dehydrogenase family LS838_RS08350 PF03176 MMPL family LS838_RS08355 PF00440 Bacterial regulatory proteins, tetR family LS838_RS08365 PF13354 Beta-lactamase enzyme family LS838_RS08375 PF00561 alpha/beta hydrolase fold LS838_RS08380 PF13673 Acetyltransferase (GNAT) domain LS838_RS08395 PF13930 DNA/RNA non-specific endonuclease LS838_RS08400 PF00248 Aldo/keto reductase family LS838_RS08410 PF00480 ROK family LS838_RS08415 PF13596 PAS domain LS838_RS08420 PF00005 ABC transporter LS838_RS08420 PF00664 ABC transporter transmembrane region LS838_RS08430 PF00561 alpha/beta hydrolase fold LS838_RS08435 PF13413 Helix-turn-helix domain LS838_RS08440 PF01132 Elongation factor P (EF-P) OB domain LS838_RS08440 PF08207 Elongation factor P (EF-P) KOW-like domain LS838_RS08440 PF09285 Elongation factor P, C-terminal LS838_RS08445 PF00485 Phosphoribulokinase / Uridine kinase family LS838_RS08450 PF13472 GDSL-like Lipase/Acylhydrolase family LS838_RS08455 PF04397 LytTr DNA-binding domain LS838_RS08460 PF09922 Cell wall-active antibiotics response protein (DUF2154) LS838_RS08465 PF00497 Bacterial extracellular solute-binding proteins, family 3 LS838_RS08470 PF00005 ABC transporter LS838_RS08475 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS08480 PF00580 UvrD/REP helicase N-terminal domain LS838_RS08480 PF13538 UvrD-like helicase C-terminal domain LS838_RS08490 PF00413 Matrixin LS838_RS08495 PF00300 Histidine phosphatase superfamily (branch 1) LS838_RS08500 PF03009 Glycerophosphoryl diester phosphodiesterase family LS838_RS08510 PF02368 Bacterial Ig-like domain (group 2) LS838_RS08510 PF03009 Glycerophosphoryl diester phosphodiesterase family LS838_RS08510 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) LS838_RS08525 PF13175 AAA ATPase domain LS838_RS08530 PF04892 LS838_RS08530 LS838_RS08535 PF04138 LS838_RS08535 LS838_RS08540 PF04892 LS838_RS08540 LS838_RS08560 PF01473 Putative cell wall binding repeat LS838_RS08570 PF01757 LS838_RS08570 LS838_RS08575 PF02706 Chain length determinant protein LS838_RS08585 PF01467 Cytidylyltransferase LS838_RS08590 PF04991 LS838_RS08590 LS838_RS08595 PF01943 LS838_RS08595 LS838_RS08595 PF14667 Polysaccharide biosynthesis C-terminal domain LS838_RS08605 PF00534 Glycosyl transferases group 1 LS838_RS08605 PF13439 Glycosyltransferase Family 4 LS838_RS08610 PF00535 Glycosyl transferase family 2 LS838_RS08615 PF03275 UDP-galactopyranose mutase LS838_RS08615 PF13450 NAD(P)-binding Rossmann-like domain LS838_RS08620 PF14393 LS838_RS08620 LS838_RS08625 PF02397 LS838_RS08625 LS838_RS08630 PF03816 Cell envelope-related transcriptional attenuator domain LS838_RS08640 PF02435 Levansucrase/Invertase LS838_RS08640 PF03217 LS838_RS08640 LS838_RS08645 PF13930 DNA/RNA non-specific endonuclease LS838_RS08655 PF01381 Helix-turn-helix LS838_RS08660 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LS838_RS08660 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LS838_RS08670 PF00990 GGDEF domain LS838_RS08690 PF01610 LS838_RS08690 LS838_RS08700 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LS838_RS08700 PF00367 phosphotransferase system, EIIB LS838_RS08700 PF02378 Phosphotransferase system, EIIC LS838_RS08705 PF00392 Bacterial regulatory proteins, gntR family LS838_RS08705 PF07702 UTRA domain LS838_RS08710 PF00128 Alpha amylase, catalytic domain LS838_RS08710 PF16657 LS838_RS08710 LS838_RS08720 PF00376 MerR family regulatory protein LS838_RS08725 PF00005 ABC transporter LS838_RS08730 PF01641 SelR domain LS838_RS08740 PF04321 RmlD substrate binding domain LS838_RS08745 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LS838_RS08750 PF00483 Nucleotidyl transferase LS838_RS08755 PF16363 LS838_RS08755 LS838_RS08760 PF08241 Methyltransferase domain LS838_RS08760 PF13411 MerR HTH family regulatory protein LS838_RS08765 PF00440 Bacterial regulatory proteins, tetR family LS838_RS08770 PF00230 Major intrinsic protein LS838_RS08775 PF03610 PTS system fructose IIA component LS838_RS08780 PF02734 DAK2 domain LS838_RS08785 PF02733 Dak1 domain LS838_RS08800 PF13930 DNA/RNA non-specific endonuclease LS838_RS08805 PF02805 Metal binding domain of Ada LS838_RS08810 PF00890 FAD binding domain LS838_RS08810 PF04205 FMN-binding domain LS838_RS08820 PF01381 Helix-turn-helix LS838_RS08825 PF13289 LS838_RS08825 LS838_RS08830 PF01935 Domain of unknown function DUF87 LS838_RS08840 PF05717 LS838_RS08840 LS838_RS08845 PF01943 LS838_RS08845 LS838_RS08845 PF14667 Polysaccharide biosynthesis C-terminal domain LS838_RS08850 PF03275 UDP-galactopyranose mutase LS838_RS08850 PF13450 NAD(P)-binding Rossmann-like domain LS838_RS08860 PF00535 Glycosyl transferase family 2 LS838_RS08865 PF00535 Glycosyl transferase family 2 LS838_RS08870 PF13704 LS838_RS08870 LS838_RS08875 PF14897 LS838_RS08875 LS838_RS08880 PF00535 Glycosyl transferase family 2 LS838_RS08900 PF01370 NAD dependent epimerase/dehydratase family LS838_RS08905 PF02397 LS838_RS08905 LS838_RS08915 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LS838_RS08920 PF02706 Chain length determinant protein LS838_RS08925 PF03816 Cell envelope-related transcriptional attenuator domain LS838_RS08930 PF01926 50S ribosome-binding GTPase LS838_RS08930 PF13167 LS838_RS08930 LS838_RS08930 PF16360 LS838_RS08930 LS838_RS08935 PF00877 NlpC/P60 family LS838_RS08940 PF00877 NlpC/P60 family LS838_RS08945 PF00877 NlpC/P60 family LS838_RS08950 PF00877 NlpC/P60 family LS838_RS08955 PF00877 NlpC/P60 family LS838_RS08960 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LS838_RS08960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LS838_RS08965 PF00877 NlpC/P60 family LS838_RS08970 PF00625 Guanylate kinase LS838_RS08975 PF09953 LS838_RS08975 LS838_RS08980 PF01385 LS838_RS08980 LS838_RS08980 PF07282 LS838_RS08980 LS838_RS08985 PF13425 LS838_RS08985 LS838_RS09005 PF12821 LS838_RS09005 LS838_RS09010 PF06738 LS838_RS09010 LS838_RS09015 PF00005 ABC transporter LS838_RS09015 PF12848 ABC transporter LS838_RS09025 PF03816 Cell envelope-related transcriptional attenuator domain LS838_RS09035 PF01432 Peptidase family M3 LS838_RS09035 PF08439 Oligopeptidase F LS838_RS09040 PF01070 FMN-dependent dehydrogenase LS838_RS09045 PF02652 LS838_RS09045 LS838_RS09050 PF00950 LS838_RS09050 LS838_RS09055 PF00005 ABC transporter LS838_RS09060 PF08282 haloacid dehalogenase-like hydrolase LS838_RS09065 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LS838_RS09065 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LS838_RS09065 PF02378 Phosphotransferase system, EIIC LS838_RS09070 PF00294 pfkB family carbohydrate kinase LS838_RS09075 PF00455 LS838_RS09075 LS838_RS09075 PF08220 DeoR-like helix-turn-helix domain LS838_RS09085 PF01177 Asp/Glu/Hydantoin racemase LS838_RS09090 PF02875 Mur ligase family, glutamate ligase domain LS838_RS09090 PF08245 Mur ligase middle domain LS838_RS09095 PF00512 His Kinase A (phospho-acceptor) domain LS838_RS09095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LS838_RS09100 PF00072 Response regulator receiver domain LS838_RS09100 PF00486 Transcriptional regulatory protein, C terminal LS838_RS09105 PF00005 ABC transporter LS838_RS09105 PF00664 ABC transporter transmembrane region LS838_RS09110 PF00005 ABC transporter LS838_RS09110 PF00664 ABC transporter transmembrane region LS838_RS09115 PF06570 LS838_RS09115 LS838_RS09120 PF01926 50S ribosome-binding GTPase LS838_RS09120 PF06071 Protein of unknown function (DUF933) LS838_RS09125 PF06107 LS838_RS09125 LS838_RS09130 PF01381 Helix-turn-helix LS838_RS09130 PF02195 ParB-like nuclease domain LS838_RS09135 PF13614 AAA domain LS838_RS09140 PF02195 ParB-like nuclease domain LS838_RS09145 PF02527 rRNA small subunit methyltransferase G LS838_RS09150 PF02674 LS838_RS09150 LS838_RS09155 PF02424 ApbE family LS838_RS09160 PF13350 Tyrosine phosphatase family LS838_RS09165 PF03358 NADPH-dependent FMN reductase LS838_RS09170 PF03358 NADPH-dependent FMN reductase LS838_RS09175 PF13305 WHG domain LS838_RS09180 PF03577 LS838_RS09180 LS838_RS09185 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LS838_RS09200 PF08279 HTH domain LS838_RS09200 PF13280 LS838_RS09200 LS838_RS09210 PF01385 LS838_RS09210 LS838_RS09210 PF07282 LS838_RS09210 LS838_RS09215 PF00005 ABC transporter LS838_RS09220 PF02687 LS838_RS09220 LS838_RS09225 PF00440 Bacterial regulatory proteins, tetR family LS838_RS09230 PF01565 FAD binding domain LS838_RS09230 PF02913 FAD linked oxidases, C-terminal domain LS838_RS09235 PF03883 LS838_RS09235 LS838_RS09245 PF03734 L,D-transpeptidase catalytic domain LS838_RS09245 PF12229 Putative peptidoglycan binding domain LS838_RS09250 PF07282 LS838_RS09250 LS838_RS09255 PF00239 Resolvase, N terminal domain LS838_RS09255 PF00376 MerR family regulatory protein LS838_RS09260 PF00881 Nitroreductase family LS838_RS09265 PF01433 Peptidase family M1 LS838_RS09265 PF11838 ERAP1-like C-terminal domain LS838_RS09275 PF04198 Putative sugar-binding domain LS838_RS09280 PF03577 LS838_RS09280 LS838_RS09285 PF00939 Sodium:sulfate symporter transmembrane region LS838_RS09290 PF00206 Lyase LS838_RS09290 PF10415 Fumarase C C-terminus LS838_RS09320 PF01661 Macro domain LS838_RS09325 PF13350 Tyrosine phosphatase family LS838_RS09335 PF00069 Protein kinase domain LS838_RS09345 PF13350 Tyrosine phosphatase family LS838_RS09350 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LS838_RS09350 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LS838_RS09355 PF07282 LS838_RS09355 LS838_RS09360 PF00239 Resolvase, N terminal domain LS838_RS09360 PF00376 MerR family regulatory protein LS838_RS09365 PF07685 CobB/CobQ-like glutamine amidotransferase domain LS838_RS09380 PF00004 ATPase family associated with various cellular activities (AAA) LS838_RS09380 PF07724 AAA domain (Cdc48 subfamily) LS838_RS09380 PF10431 C-terminal, D2-small domain, of ClpB protein LS838_RS09385 PF05525 LS838_RS09385 LS838_RS09390 PF05437 LS838_RS09390 LS838_RS09395 PF03591 LS838_RS09395 LS838_RS09400 PF00892 EamA-like transporter family LS838_RS09405 PF07722 Peptidase C26 LS838_RS09410 PF08282 haloacid dehalogenase-like hydrolase LS838_RS09415 PF07282 LS838_RS09415 LS838_RS09420 PF00239 Resolvase, N terminal domain LS838_RS09420 PF00376 MerR family regulatory protein LS838_RS09425 PF06028 Alpha/beta hydrolase of unknown function (DUF915) LS838_RS09450 PF00939 Sodium:sulfate symporter transmembrane region LS838_RS09460 PF04226 LS838_RS09460 LS838_RS09470 PF00885 6,7-dimethyl-8-ribityllumazine synthase LS838_RS09475 PF00925 GTP cyclohydrolase II LS838_RS09475 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LS838_RS09480 PF00677 Lumazine binding domain LS838_RS09485 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LS838_RS09485 PF01872 RibD C-terminal domain LS838_RS09545 PF00440 Bacterial regulatory proteins, tetR family LS838_RS09550 PF00005 ABC transporter LS838_RS09550 PF02687 LS838_RS09550 LS838_RS09550 PF12704 MacB-like periplasmic core domain LS838_RS09555 PF01521 Iron-sulphur cluster biosynthesis LS838_RS09565 PF04914 DltD C-terminal region LS838_RS09565 PF04915 DltD N-terminal region LS838_RS09565 PF04918 DltD central region LS838_RS09570 PF00550 Phosphopantetheine attachment site LS838_RS09575 PF03062 LS838_RS09575 LS838_RS09580 PF00501 AMP-binding enzyme LS838_RS09585 PF12459 LS838_RS09585 LS838_RS09605 PF00571 CBS domain LS838_RS09610 PF00122 E1-E2 ATPase LS838_RS09610 PF00702 haloacid dehalogenase-like hydrolase LS838_RS09620 PF01385 LS838_RS09620 LS838_RS09620 PF07282 LS838_RS09620 LS838_RS09620 PF12323 LS838_RS09620 LS838_RS09625 PF01797 Transposase IS200 like LS838_RS09630 PF00999 Sodium/hydrogen exchanger family LS838_RS09635 PF02517 CAAX protease self-immunity LS838_RS09640 PF02698 DUF218 domain LS838_RS09645 PF02608 Basic membrane protein LS838_RS09650 PF07690 Major Facilitator Superfamily LS838_RS09665 PF00072 Response regulator receiver domain LS838_RS09665 PF04397 LytTr DNA-binding domain LS838_RS09670 PF14501 GHKL domain LS838_RS09680 PF00069 Protein kinase domain LS838_RS09685 PF11611 Domain of unknown function (DUF4352) LS838_RS09690 PF02608 Basic membrane protein LS838_RS09715 PF02608 Basic membrane protein LS838_RS09720 PF00005 ABC transporter LS838_RS09725 PF02653 LS838_RS09725 LS838_RS09730 PF02653 LS838_RS09730 LS838_RS09745 PF00248 Aldo/keto reductase family LS838_RS09750 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LS838_RS09760 PF02661 Fic/DOC family LS838_RS09765 PF00665 Integrase core domain LS838_RS09765 PF13276 LS838_RS09765 LS838_RS09775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LS838_RS09775 PF07992 Pyridine nucleotide-disulphide oxidoreductase LS838_RS09800 PF00589 Phage integrase family LS838_RS09800 PF13495 Phage integrase, N-terminal SAM-like domain LS838_RS09805 PF00210 Ferritin-like domain LS838_RS09815 PF00665 Integrase core domain LS838_RS09815 PF13276 LS838_RS09815 LS838_RS09825 PF00005 ABC transporter LS838_RS09835 PF01712 Deoxynucleoside kinase LS838_RS09840 PF01712 Deoxynucleoside kinase LS838_RS09845 PF00497 Bacterial extracellular solute-binding proteins, family 3 LS838_RS09845 PF00528 Binding-protein-dependent transport system inner membrane component LS838_RS09850 PF00005 ABC transporter LS838_RS09855 PF00860 Permease family LS838_RS09860 PF00005 ABC transporter LS838_RS09860 PF00664 ABC transporter transmembrane region LS838_RS09865 PF00654 Voltage gated chloride channel LS838_RS09865 PF02080 TrkA-C domain LS838_RS09905 PF00005 ABC transporter LS838_RS09920 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LS838_RS09920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LS838_RS09925 PF00205 Thiamine pyrophosphate enzyme, central domain LS838_RS09925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LS838_RS09925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LS838_RS09930 PF01134 Glucose inhibited division protein A LS838_RS09930 PF13932 GidA associated domain 3 LS838_RS09935 PF01926 50S ribosome-binding GTPase LS838_RS09935 PF10396 GTP-binding protein TrmE N-terminus LS838_RS09935 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE LS838_RS09940 PF02096 60Kd inner membrane protein LS838_RS09945 PF00825 Ribonuclease P LS838_RS09950 PF00468 Ribosomal protein L34