LS838_RS06520 30e09eef927275f4e479ed7b4d13f333 308 SUPERFAMILY SSF52540 5 112 5.04E-17 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06520 30e09eef927275f4e479ed7b4d13f333 308 Pfam PF01715 IPP transferase 37 279 7.4E-71 T 09-03-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 LS838_RS06520 30e09eef927275f4e479ed7b4d13f333 308 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 4 305 26.722 T 09-03-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 LS838_RS06520 30e09eef927275f4e479ed7b4d13f333 308 Gene3D G3DSA:3.40.50.300 1 172 1.5E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06520 30e09eef927275f4e479ed7b4d13f333 308 SUPERFAMILY SSF52540 3 55 1.28E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06520 30e09eef927275f4e479ed7b4d13f333 308 SUPERFAMILY SSF52540 139 221 1.28E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06520 30e09eef927275f4e479ed7b4d13f333 308 Gene3D G3DSA:1.10.287.890 198 278 1.8E-28 T 09-03-2017 LS838_RS06520 30e09eef927275f4e479ed7b4d13f333 308 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 4 286 8.0E-84 T 09-03-2017 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 LS838_RS01890 045c7280491d28a159b598f545359401 79 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 77 1.8E-22 T 09-03-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01890 045c7280491d28a159b598f545359401 79 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 09-03-2017 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01890 045c7280491d28a159b598f545359401 79 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 74 1.0E-9 T 09-03-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01890 045c7280491d28a159b598f545359401 79 Pfam PF00467 KOW motif 6 36 1.0E-7 T 09-03-2017 IPR005824 KOW LS838_RS01890 045c7280491d28a159b598f545359401 79 SUPERFAMILY SSF50104 2 73 1.28E-22 T 09-03-2017 IPR008991 Translation protein SH3-like domain LS838_RS01890 045c7280491d28a159b598f545359401 79 SMART SM00739 2 29 7.8E-5 T 09-03-2017 IPR005824 KOW LS838_RS01890 045c7280491d28a159b598f545359401 79 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 73 14.44 T 09-03-2017 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01890 045c7280491d28a159b598f545359401 79 Gene3D G3DSA:2.30.30.30 1 75 2.0E-19 T 09-03-2017 IPR014722 Ribosomal protein L2 domain 2 LS838_RS00385 5f09713e6f184f021ac60aa7d8197e66 277 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 274 1.2E-53 T 09-03-2017 IPR003797 DegV LS838_RS00385 5f09713e6f184f021ac60aa7d8197e66 277 Gene3D G3DSA:3.30.1180.10 153 275 4.6E-31 T 09-03-2017 LS838_RS00385 5f09713e6f184f021ac60aa7d8197e66 277 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 271 2.4E-49 T 09-03-2017 IPR003797 DegV LS838_RS00385 5f09713e6f184f021ac60aa7d8197e66 277 SUPERFAMILY SSF82549 1 276 4.71E-65 T 09-03-2017 LS838_RS00385 5f09713e6f184f021ac60aa7d8197e66 277 Gene3D G3DSA:3.40.50.10170 1 149 2.1E-33 T 09-03-2017 LS838_RS08055 87fb5e3678f83f0bf0f0b6061441405b 260 Pfam PF01380 SIS domain 115 219 8.2E-10 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 LS838_RS08055 87fb5e3678f83f0bf0f0b6061441405b 260 Gene3D G3DSA:3.40.50.10490 64 252 1.7E-10 T 09-03-2017 LS838_RS08055 87fb5e3678f83f0bf0f0b6061441405b 260 SUPERFAMILY SSF53697 95 253 2.43E-13 T 09-03-2017 LS838_RS08055 87fb5e3678f83f0bf0f0b6061441405b 260 SUPERFAMILY SSF46689 3 74 1.97E-18 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS08055 87fb5e3678f83f0bf0f0b6061441405b 260 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 73 3.1E-20 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 LS838_RS08055 87fb5e3678f83f0bf0f0b6061441405b 260 Gene3D G3DSA:1.10.10.10 3 63 1.8E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS04120 6b34f46e9c9bed755a57745ad50c7867 147 SUPERFAMILY SSF54637 2 141 1.43E-44 T 09-03-2017 IPR029069 HotDog domain LS838_RS04120 6b34f46e9c9bed755a57745ad50c7867 147 Gene3D G3DSA:3.10.129.10 2 141 9.4E-53 T 09-03-2017 IPR029069 HotDog domain LS838_RS04120 6b34f46e9c9bed755a57745ad50c7867 147 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 4 143 31.335 T 09-03-2017 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LS838_RS04120 6b34f46e9c9bed755a57745ad50c7867 147 Pfam PF07977 FabA-like domain 13 135 4.4E-31 T 09-03-2017 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LS838_RS04120 6b34f46e9c9bed755a57745ad50c7867 147 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 5 141 5.9E-51 T 09-03-2017 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LS838_RS06275 87be7f909adc79953f70ef5c74b5791e 283 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 119 1.2E-36 T 09-03-2017 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LS838_RS06275 87be7f909adc79953f70ef5c74b5791e 283 SUPERFAMILY SSF53223 3 119 1.25E-34 T 09-03-2017 LS838_RS06275 87be7f909adc79953f70ef5c74b5791e 283 Gene3D G3DSA:3.40.192.10 6 137 1.0E-42 T 09-03-2017 LS838_RS06275 87be7f909adc79953f70ef5c74b5791e 283 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 280 37.052 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LS838_RS06275 87be7f909adc79953f70ef5c74b5791e 283 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 279 9.6E-67 T 09-03-2017 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LS838_RS06275 87be7f909adc79953f70ef5c74b5791e 283 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 74 99 - T 09-03-2017 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LS838_RS06275 87be7f909adc79953f70ef5c74b5791e 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 202 231 3.9E-77 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LS838_RS06275 87be7f909adc79953f70ef5c74b5791e 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 32 54 3.9E-77 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LS838_RS06275 87be7f909adc79953f70ef5c74b5791e 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 236 252 3.9E-77 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LS838_RS06275 87be7f909adc79953f70ef5c74b5791e 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 253 271 3.9E-77 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LS838_RS06275 87be7f909adc79953f70ef5c74b5791e 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 153 173 3.9E-77 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LS838_RS06275 87be7f909adc79953f70ef5c74b5791e 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 73 100 3.9E-77 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LS838_RS06275 87be7f909adc79953f70ef5c74b5791e 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 108 129 3.9E-77 T 09-03-2017 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 LS838_RS06275 87be7f909adc79953f70ef5c74b5791e 283 Gene3D G3DSA:3.40.50.720 138 261 5.2E-52 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS06275 87be7f909adc79953f70ef5c74b5791e 283 SUPERFAMILY SSF51735 121 279 1.82E-48 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS07105 80d88f8abf8efb925a06d3fff360a616 877 SUPERFAMILY SSF55186 555 711 1.96E-47 T 09-03-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 LS838_RS07105 80d88f8abf8efb925a06d3fff360a616 877 SUPERFAMILY SSF50447 486 547 1.48E-12 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain LS838_RS07105 80d88f8abf8efb925a06d3fff360a616 877 SUPERFAMILY SSF55681 5 246 3.98E-87 T 09-03-2017 LS838_RS07105 80d88f8abf8efb925a06d3fff360a616 877 Pfam PF01411 tRNA synthetases class II (A) 8 558 2.1E-186 T 09-03-2017 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 LS838_RS07105 80d88f8abf8efb925a06d3fff360a616 877 Pfam PF02272 DHHA1 domain 804 873 2.4E-13 T 09-03-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 LS838_RS07105 80d88f8abf8efb925a06d3fff360a616 877 SUPERFAMILY SSF101353 247 445 1.22E-64 T 09-03-2017 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 LS838_RS07105 80d88f8abf8efb925a06d3fff360a616 877 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 877 165.487 T 09-03-2017 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 LS838_RS07105 80d88f8abf8efb925a06d3fff360a616 877 SMART SM00863 656 699 4.9E-22 T 09-03-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 LS838_RS07105 80d88f8abf8efb925a06d3fff360a616 877 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 859 1.2E-291 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 LS838_RS07105 80d88f8abf8efb925a06d3fff360a616 877 Gene3D G3DSA:3.30.930.10 4 242 3.2E-97 T 09-03-2017 LS838_RS07105 80d88f8abf8efb925a06d3fff360a616 877 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 656 699 5.1E-19 T 09-03-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 LS838_RS07105 80d88f8abf8efb925a06d3fff360a616 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 302 315 5.3E-30 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 LS838_RS07105 80d88f8abf8efb925a06d3fff360a616 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 200 211 5.3E-30 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 LS838_RS07105 80d88f8abf8efb925a06d3fff360a616 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 227 240 5.3E-30 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 LS838_RS07105 80d88f8abf8efb925a06d3fff360a616 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 5.3E-30 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 LS838_RS07105 80d88f8abf8efb925a06d3fff360a616 877 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 294 5.3E-30 T 09-03-2017 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 LS838_RS02460 62c0d1808cea189be58c986e72d2c2b6 448 SUPERFAMILY SSF54631 213 353 3.92E-30 T 09-03-2017 LS838_RS02460 62c0d1808cea189be58c986e72d2c2b6 448 SMART SM00116 232 282 0.0019 T 09-03-2017 IPR000644 CBS domain LS838_RS02460 62c0d1808cea189be58c986e72d2c2b6 448 SMART SM00116 295 343 7.6 T 09-03-2017 IPR000644 CBS domain LS838_RS02460 62c0d1808cea189be58c986e72d2c2b6 448 SMART SM01091 359 439 6.5E-9 T 09-03-2017 IPR005170 Transporter-associated domain LS838_RS02460 62c0d1808cea189be58c986e72d2c2b6 448 Pfam PF01595 Domain of unknown function DUF21 15 207 1.2E-40 T 09-03-2017 IPR002550 Domain of unknown function DUF21 LS838_RS02460 62c0d1808cea189be58c986e72d2c2b6 448 Gene3D G3DSA:3.10.580.10 211 337 1.0E-26 T 09-03-2017 LS838_RS02460 62c0d1808cea189be58c986e72d2c2b6 448 Gene3D G3DSA:3.30.465.10 338 426 1.0E-14 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LS838_RS02460 62c0d1808cea189be58c986e72d2c2b6 448 Pfam PF03471 Transporter associated domain 360 426 7.7E-9 T 09-03-2017 IPR005170 Transporter-associated domain LS838_RS02460 62c0d1808cea189be58c986e72d2c2b6 448 Pfam PF00571 CBS domain 293 342 1.4E-8 T 09-03-2017 IPR000644 CBS domain LS838_RS02460 62c0d1808cea189be58c986e72d2c2b6 448 Pfam PF00571 CBS domain 223 279 2.6E-7 T 09-03-2017 IPR000644 CBS domain LS838_RS02460 62c0d1808cea189be58c986e72d2c2b6 448 SUPERFAMILY SSF56176 357 435 1.66E-11 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LS838_RS02790 9ea96d55df12db0215661116aa5392ef 343 Gene3D G3DSA:3.30.160.20 199 277 2.3E-34 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain LS838_RS02790 9ea96d55df12db0215661116aa5392ef 343 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 336 1.4E-145 T 09-03-2017 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 LS838_RS02790 9ea96d55df12db0215661116aa5392ef 343 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 216 232 - T 09-03-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LS838_RS02790 9ea96d55df12db0215661116aa5392ef 343 Pfam PF03462 PCRF domain 3 191 8.9E-57 T 09-03-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 LS838_RS02790 9ea96d55df12db0215661116aa5392ef 343 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 337 36.548 T 09-03-2017 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 LS838_RS02790 9ea96d55df12db0215661116aa5392ef 343 SUPERFAMILY SSF75620 3 339 8.37E-128 T 09-03-2017 LS838_RS02790 9ea96d55df12db0215661116aa5392ef 343 Pfam PF00472 RF-1 domain 200 309 5.4E-39 T 09-03-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LS838_RS02790 9ea96d55df12db0215661116aa5392ef 343 SMART SM00937 56 166 2.3E-50 T 09-03-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 LS838_RS02790 9ea96d55df12db0215661116aa5392ef 343 Gene3D G3DSA:1.20.58.410 2 86 2.6E-15 T 09-03-2017 LS838_RS09550 66de0793b92557250ff353fb859abaea 666 SMART SM00382 33 226 2.6E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS09550 66de0793b92557250ff353fb859abaea 666 Gene3D G3DSA:3.40.50.300 2 233 4.4E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09550 66de0793b92557250ff353fb859abaea 666 SUPERFAMILY SSF52540 3 229 8.05E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09550 66de0793b92557250ff353fb859abaea 666 Pfam PF12704 MacB-like periplasmic core domain 267 511 8.2E-15 T 09-03-2017 IPR025857 MacB-like periplasmic core domain LS838_RS09550 66de0793b92557250ff353fb859abaea 666 Pfam PF00005 ABC transporter 24 172 8.5E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS09550 66de0793b92557250ff353fb859abaea 666 Pfam PF02687 FtsX-like permease family 542 659 3.6E-23 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 LS838_RS09550 66de0793b92557250ff353fb859abaea 666 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS01450 5df80967f7240a308b044fddfd802e2b 276 Gene3D G3DSA:3.30.1240.10 89 184 2.2E-5 T 09-03-2017 LS838_RS01450 5df80967f7240a308b044fddfd802e2b 276 Gene3D G3DSA:3.40.50.1000 185 272 3.8E-43 T 09-03-2017 IPR023214 HAD-like domain LS838_RS01450 5df80967f7240a308b044fddfd802e2b 276 Gene3D G3DSA:3.40.50.1000 1 77 3.8E-43 T 09-03-2017 IPR023214 HAD-like domain LS838_RS01450 5df80967f7240a308b044fddfd802e2b 276 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 1.9E-48 T 09-03-2017 IPR000150 Cof protein GO:0016787 LS838_RS01450 5df80967f7240a308b044fddfd802e2b 276 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 3.9E-54 T 09-03-2017 IPR023214 HAD-like domain LS838_RS01450 5df80967f7240a308b044fddfd802e2b 276 SUPERFAMILY SSF56784 1 271 2.03E-59 T 09-03-2017 IPR023214 HAD-like domain LS838_RS01450 5df80967f7240a308b044fddfd802e2b 276 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 239 2.5E-27 T 09-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 LS838_RS03370 836e7cf8e7db48451749361d7821c0bd 720 Pfam PF00905 Penicillin binding protein transpeptidase domain 282 590 4.2E-64 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LS838_RS03370 836e7cf8e7db48451749361d7821c0bd 720 Gene3D G3DSA:3.40.710.10 264 593 9.4E-79 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS03370 836e7cf8e7db48451749361d7821c0bd 720 Pfam PF03793 PASTA domain 667 718 6.7E-8 T 09-03-2017 IPR005543 PASTA domain LS838_RS03370 836e7cf8e7db48451749361d7821c0bd 720 Pfam PF03793 PASTA domain 607 660 1.4E-9 T 09-03-2017 IPR005543 PASTA domain LS838_RS03370 836e7cf8e7db48451749361d7821c0bd 720 SUPERFAMILY SSF56601 208 594 4.88E-81 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS03370 836e7cf8e7db48451749361d7821c0bd 720 SUPERFAMILY SSF56519 65 256 1.44E-43 T 09-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LS838_RS03370 836e7cf8e7db48451749361d7821c0bd 720 Pfam PF03717 Penicillin-binding Protein dimerisation domain 69 238 9.2E-24 T 09-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LS838_RS03370 836e7cf8e7db48451749361d7821c0bd 720 SUPERFAMILY SSF54184 665 719 2.75E-11 T 09-03-2017 LS838_RS03370 836e7cf8e7db48451749361d7821c0bd 720 Gene3D G3DSA:3.90.1310.10 156 263 3.6E-32 T 09-03-2017 LS838_RS03370 836e7cf8e7db48451749361d7821c0bd 720 SMART SM00740 664 720 1.4E-6 T 09-03-2017 IPR005543 PASTA domain LS838_RS03370 836e7cf8e7db48451749361d7821c0bd 720 SMART SM00740 603 663 3.7E-7 T 09-03-2017 IPR005543 PASTA domain LS838_RS03370 836e7cf8e7db48451749361d7821c0bd 720 SUPERFAMILY SSF54184 607 661 4.45E-11 T 09-03-2017 LS838_RS02665 a519584aa95a4de37d429f8eb7b34a83 200 SMART SM01118 4 199 6.8E-15 T 09-03-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 LS838_RS02665 a519584aa95a4de37d429f8eb7b34a83 200 SUPERFAMILY SSF55154 1 198 4.25E-30 T 09-03-2017 IPR033469 CYTH-like domain Reactome: R-HSA-196819 LS838_RS02665 a519584aa95a4de37d429f8eb7b34a83 200 Pfam PF01928 CYTH domain 4 177 6.7E-18 T 09-03-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 LS838_RS02665 a519584aa95a4de37d429f8eb7b34a83 200 Gene3D G3DSA:2.40.320.10 4 197 2.1E-13 T 09-03-2017 IPR023577 CYTH domain Reactome: R-HSA-196819 LS838_RS02435 2c83a7de5cc75387160edf68c1ece5c7 230 Gene3D G3DSA:3.30.70.260 146 207 1.4E-20 T 09-03-2017 LS838_RS02435 2c83a7de5cc75387160edf68c1ece5c7 230 SUPERFAMILY SSF75445 132 210 3.66E-19 T 09-03-2017 LS838_RS02435 2c83a7de5cc75387160edf68c1ece5c7 230 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 55 223 2.2E-52 T 09-03-2017 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 LS838_RS02435 2c83a7de5cc75387160edf68c1ece5c7 230 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 6 227 29.604 T 09-03-2017 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 LS838_RS02435 2c83a7de5cc75387160edf68c1ece5c7 230 Gene3D G3DSA:3.40.50.1360 9 145 2.0E-52 T 09-03-2017 LS838_RS02435 2c83a7de5cc75387160edf68c1ece5c7 230 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 9 224 2.9E-71 T 09-03-2017 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 LS838_RS02435 2c83a7de5cc75387160edf68c1ece5c7 230 SUPERFAMILY SSF100950 5 152 8.7E-41 T 09-03-2017 LS838_RS02770 9e8726917935ddd9eee48388a633bbfd 419 Gene3D G3DSA:3.40.50.300 285 417 4.7E-12 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02770 9e8726917935ddd9eee48388a633bbfd 419 SMART SM00487 87 272 1.8E-19 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LS838_RS02770 9e8726917935ddd9eee48388a633bbfd 419 Pfam PF00271 Helicase conserved C-terminal domain 294 375 2.9E-7 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS02770 9e8726917935ddd9eee48388a633bbfd 419 Pfam PF00270 DEAD/DEAH box helicase 105 241 1.7E-8 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LS838_RS02770 9e8726917935ddd9eee48388a633bbfd 419 Gene3D G3DSA:3.40.50.300 90 259 5.9E-24 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02770 9e8726917935ddd9eee48388a633bbfd 419 SUPERFAMILY SSF52540 106 396 4.53E-31 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06825 62e1480885943a04c82aa5984e36037a 122 Pfam PF01202 Shikimate kinase 9 81 1.4E-18 T 09-03-2017 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 LS838_RS06825 62e1480885943a04c82aa5984e36037a 122 SUPERFAMILY SSF52540 1 86 5.57E-13 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06825 62e1480885943a04c82aa5984e36037a 122 PRINTS PR01100 Shikimate kinase family signature 3 18 3.1E-9 T 09-03-2017 LS838_RS06825 62e1480885943a04c82aa5984e36037a 122 PRINTS PR01100 Shikimate kinase family signature 72 81 3.1E-9 T 09-03-2017 LS838_RS06825 62e1480885943a04c82aa5984e36037a 122 PRINTS PR01100 Shikimate kinase family signature 55 63 3.1E-9 T 09-03-2017 LS838_RS06825 62e1480885943a04c82aa5984e36037a 122 PRINTS PR01100 Shikimate kinase family signature 27 40 3.1E-9 T 09-03-2017 LS838_RS06825 62e1480885943a04c82aa5984e36037a 122 Gene3D G3DSA:3.40.50.300 1 84 2.8E-24 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02860 64ef143699ef95da1062c2aa21681a83 194 Gene3D G3DSA:3.90.226.10 2 191 6.4E-83 T 09-03-2017 IPR029045 ClpP/crotonase-like domain LS838_RS02860 64ef143699ef95da1062c2aa21681a83 194 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 2 192 41.966 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LS838_RS02860 64ef143699ef95da1062c2aa21681a83 194 Pfam PF00574 Clp protease 12 191 3.1E-81 T 09-03-2017 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA LS838_RS02860 64ef143699ef95da1062c2aa21681a83 194 PRINTS PR00127 Clp protease catalytic subunit P signature 167 186 1.5E-47 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LS838_RS02860 64ef143699ef95da1062c2aa21681a83 194 PRINTS PR00127 Clp protease catalytic subunit P signature 18 33 1.5E-47 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LS838_RS02860 64ef143699ef95da1062c2aa21681a83 194 PRINTS PR00127 Clp protease catalytic subunit P signature 110 129 1.5E-47 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LS838_RS02860 64ef143699ef95da1062c2aa21681a83 194 PRINTS PR00127 Clp protease catalytic subunit P signature 58 78 1.5E-47 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LS838_RS02860 64ef143699ef95da1062c2aa21681a83 194 PRINTS PR00127 Clp protease catalytic subunit P signature 89 106 1.5E-47 T 09-03-2017 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 LS838_RS02860 64ef143699ef95da1062c2aa21681a83 194 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 111 124 - T 09-03-2017 IPR033135 ClpP, histidine active site LS838_RS02860 64ef143699ef95da1062c2aa21681a83 194 SUPERFAMILY SSF52096 10 189 2.98E-70 T 09-03-2017 IPR029045 ClpP/crotonase-like domain LS838_RS08420 be9395a2b672cf3e377567d5f49a862c 531 SMART SM00382 346 529 4.8E-18 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS08420 be9395a2b672cf3e377567d5f49a862c 531 Gene3D G3DSA:1.20.1560.10 9 299 1.7E-21 T 09-03-2017 LS838_RS08420 be9395a2b672cf3e377567d5f49a862c 531 ProSitePatterns PS00211 ABC transporters family signature. 454 468 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS08420 be9395a2b672cf3e377567d5f49a862c 531 Gene3D G3DSA:3.40.50.300 321 527 3.7E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08420 be9395a2b672cf3e377567d5f49a862c 531 SUPERFAMILY SSF52540 313 527 1.04E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08420 be9395a2b672cf3e377567d5f49a862c 531 Pfam PF00005 ABC transporter 338 482 2.1E-26 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS08420 be9395a2b672cf3e377567d5f49a862c 531 Pfam PF00664 ABC transporter transmembrane region 16 277 4.8E-13 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS08420 be9395a2b672cf3e377567d5f49a862c 531 SUPERFAMILY SSF90123 7 298 3.27E-33 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS02925 663c36fc4c99625da55d023589ee2493 227 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 7 212 5.2E-73 T 09-03-2017 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 LS838_RS02925 663c36fc4c99625da55d023589ee2493 227 Gene3D G3DSA:3.40.470.10 3 221 2.2E-91 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 LS838_RS02925 663c36fc4c99625da55d023589ee2493 227 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 58 67 - T 09-03-2017 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 LS838_RS02925 663c36fc4c99625da55d023589ee2493 227 SMART SM00987 50 209 2.5E-33 T 09-03-2017 LS838_RS02925 663c36fc4c99625da55d023589ee2493 227 SMART SM00986 50 209 2.5E-33 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 LS838_RS02925 663c36fc4c99625da55d023589ee2493 227 Pfam PF03167 Uracil DNA glycosylase superfamily 54 208 5.4E-21 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 LS838_RS02925 663c36fc4c99625da55d023589ee2493 227 SUPERFAMILY SSF52141 4 221 2.18E-87 T 09-03-2017 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 LS838_RS02925 663c36fc4c99625da55d023589ee2493 227 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 6 220 38.198 T 09-03-2017 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 LS838_RS04460 3d2139982d734dec44fcf46f84124384 341 PIRSF PIRSF003314 1 329 1.5E-102 T 09-03-2017 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 LS838_RS04460 3d2139982d734dec44fcf46f84124384 341 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 4 330 29.838 T 09-03-2017 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 LS838_RS04460 3d2139982d734dec44fcf46f84124384 341 SUPERFAMILY SSF51395 24 313 8.9E-65 T 09-03-2017 LS838_RS04460 3d2139982d734dec44fcf46f84124384 341 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 7 313 1.3E-89 T 09-03-2017 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 LS838_RS04460 3d2139982d734dec44fcf46f84124384 341 Pfam PF01070 FMN-dependent dehydrogenase 161 312 2.3E-12 T 09-03-2017 IPR000262 FMN-dependent dehydrogenase GO:0016491 LS838_RS04460 3d2139982d734dec44fcf46f84124384 341 Gene3D G3DSA:3.20.20.70 23 313 2.7E-99 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LS838_RS09165 dd75db8f46ddc22bef65e83cce65bdb0 182 Pfam PF03358 NADPH-dependent FMN reductase 1 146 4.8E-33 T 09-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 LS838_RS09165 dd75db8f46ddc22bef65e83cce65bdb0 182 SUPERFAMILY SSF52218 1 173 5.24E-37 T 09-03-2017 IPR029039 Flavoprotein-like domain LS838_RS09165 dd75db8f46ddc22bef65e83cce65bdb0 182 Gene3D G3DSA:3.40.50.360 1 179 1.2E-43 T 09-03-2017 IPR029039 Flavoprotein-like domain LS838_RS03920 821b33dcc281daf219660e1bb5d24a06 460 Gene3D G3DSA:1.10.40.30 375 431 2.4E-27 T 09-03-2017 LS838_RS03920 821b33dcc281daf219660e1bb5d24a06 460 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 6.0E-63 T 09-03-2017 LS838_RS03920 821b33dcc281daf219660e1bb5d24a06 460 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 6.0E-63 T 09-03-2017 LS838_RS03920 821b33dcc281daf219660e1bb5d24a06 460 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 6.0E-63 T 09-03-2017 LS838_RS03920 821b33dcc281daf219660e1bb5d24a06 460 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 6.0E-63 T 09-03-2017 LS838_RS03920 821b33dcc281daf219660e1bb5d24a06 460 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 6.0E-63 T 09-03-2017 LS838_RS03920 821b33dcc281daf219660e1bb5d24a06 460 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 6.0E-63 T 09-03-2017 LS838_RS03920 821b33dcc281daf219660e1bb5d24a06 460 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 09-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 LS838_RS03920 821b33dcc281daf219660e1bb5d24a06 460 Pfam PF00206 Lyase 7 301 3.4E-76 T 09-03-2017 IPR022761 Fumarate lyase, N-terminal LS838_RS03920 821b33dcc281daf219660e1bb5d24a06 460 Gene3D G3DSA:1.10.275.10 2 107 5.4E-38 T 09-03-2017 IPR024083 Fumarase/histidase, N-terminal LS838_RS03920 821b33dcc281daf219660e1bb5d24a06 460 TIGRFAM TIGR00838 argH: argininosuccinate lyase 4 456 8.2E-188 T 09-03-2017 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LS838_RS03920 821b33dcc281daf219660e1bb5d24a06 460 Hamap MF_00006 Argininosuccinate lyase [argH]. 3 454 42.294 T 09-03-2017 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LS838_RS03920 821b33dcc281daf219660e1bb5d24a06 460 SUPERFAMILY SSF48557 4 455 2.36E-147 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 LS838_RS03920 821b33dcc281daf219660e1bb5d24a06 460 Gene3D G3DSA:1.20.200.10 108 374 1.0E-98 T 09-03-2017 LS838_RS03920 821b33dcc281daf219660e1bb5d24a06 460 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 1.4E-27 T 09-03-2017 IPR000362 Fumarate lyase family LS838_RS03920 821b33dcc281daf219660e1bb5d24a06 460 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 1.4E-27 T 09-03-2017 IPR000362 Fumarate lyase family LS838_RS03920 821b33dcc281daf219660e1bb5d24a06 460 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 1.4E-27 T 09-03-2017 IPR000362 Fumarate lyase family LS838_RS03920 821b33dcc281daf219660e1bb5d24a06 460 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 1.4E-27 T 09-03-2017 IPR000362 Fumarate lyase family LS838_RS03920 821b33dcc281daf219660e1bb5d24a06 460 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 4.1E-22 T 09-03-2017 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LS838_RS03265 c05caad9d97e68483eb9ad38d6219a64 153 PRINTS PR01438 Universal stress protein signature 124 146 3.9E-17 T 09-03-2017 IPR006015 Universal stress protein A LS838_RS03265 c05caad9d97e68483eb9ad38d6219a64 153 PRINTS PR01438 Universal stress protein signature 106 118 3.9E-17 T 09-03-2017 IPR006015 Universal stress protein A LS838_RS03265 c05caad9d97e68483eb9ad38d6219a64 153 PRINTS PR01438 Universal stress protein signature 7 25 3.9E-17 T 09-03-2017 IPR006015 Universal stress protein A LS838_RS03265 c05caad9d97e68483eb9ad38d6219a64 153 SUPERFAMILY SSF52402 7 147 5.61E-35 T 09-03-2017 LS838_RS03265 c05caad9d97e68483eb9ad38d6219a64 153 PIRSF PIRSF006276 3 149 2.1E-21 T 09-03-2017 IPR006015 Universal stress protein A LS838_RS03265 c05caad9d97e68483eb9ad38d6219a64 153 Gene3D G3DSA:3.40.50.620 7 146 1.1E-42 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS03265 c05caad9d97e68483eb9ad38d6219a64 153 Pfam PF00582 Universal stress protein family 7 146 4.8E-35 T 09-03-2017 IPR006016 UspA GO:0006950 LS838_RS06200 359b81fad882995ee542805a50d62d00 297 Gene3D G3DSA:2.40.50.140 5 64 7.2E-18 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS06200 359b81fad882995ee542805a50d62d00 297 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 5 291 34.829 T 09-03-2017 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 LS838_RS06200 359b81fad882995ee542805a50d62d00 297 Gene3D G3DSA:1.10.40.50 229 291 2.1E-21 T 09-03-2017 LS838_RS06200 359b81fad882995ee542805a50d62d00 297 SUPERFAMILY SSF50249 5 66 6.85E-10 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS06200 359b81fad882995ee542805a50d62d00 297 Pfam PF16745 RsgA N-terminal domain 6 58 1.2E-16 T 09-03-2017 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal LS838_RS06200 359b81fad882995ee542805a50d62d00 297 Gene3D G3DSA:3.40.50.300 67 224 7.3E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06200 359b81fad882995ee542805a50d62d00 297 Pfam PF03193 Protein of unknown function, DUF258 62 226 1.0E-49 T 09-03-2017 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 LS838_RS06200 359b81fad882995ee542805a50d62d00 297 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 43 283 4.8E-67 T 09-03-2017 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 LS838_RS06200 359b81fad882995ee542805a50d62d00 297 SUPERFAMILY SSF52540 68 289 2.16E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05310 5df140bedcc52b916977fa801d559c9d 303 SUPERFAMILY SSF52317 17 295 3.62E-91 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS05310 5df140bedcc52b916977fa801d559c9d 303 Pfam PF04204 Homoserine O-succinyltransferase 2 297 1.1E-127 T 09-03-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 LS838_RS05310 5df140bedcc52b916977fa801d559c9d 303 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 287 1.0E-96 T 09-03-2017 LS838_RS05310 5df140bedcc52b916977fa801d559c9d 303 PIRSF PIRSF000450 1 303 2.1E-137 T 09-03-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 LS838_RS05310 5df140bedcc52b916977fa801d559c9d 303 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 299 50.144 T 09-03-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 LS838_RS05310 5df140bedcc52b916977fa801d559c9d 303 Gene3D G3DSA:3.40.50.880 34 299 1.7E-115 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS05310 5df140bedcc52b916977fa801d559c9d 303 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 299 1.4E-122 T 09-03-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 LS838_RS01910 1702f8b98df88bf43da1de410a8c51dc 176 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 152 160 - T 09-03-2017 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01910 1702f8b98df88bf43da1de410a8c51dc 176 Pfam PF00347 Ribosomal protein L6 88 162 1.9E-19 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01910 1702f8b98df88bf43da1de410a8c51dc 176 Pfam PF00347 Ribosomal protein L6 11 78 1.6E-15 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01910 1702f8b98df88bf43da1de410a8c51dc 176 Gene3D G3DSA:3.90.930.12 2 80 5.2E-26 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01910 1702f8b98df88bf43da1de410a8c51dc 176 PRINTS PR00059 Ribosomal protein L6 signature 97 113 1.3E-31 T 09-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LS838_RS01910 1702f8b98df88bf43da1de410a8c51dc 176 PRINTS PR00059 Ribosomal protein L6 signature 69 94 1.3E-31 T 09-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LS838_RS01910 1702f8b98df88bf43da1de410a8c51dc 176 PRINTS PR00059 Ribosomal protein L6 signature 139 160 1.3E-31 T 09-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LS838_RS01910 1702f8b98df88bf43da1de410a8c51dc 176 PIRSF PIRSF002162 1 175 2.5E-48 T 09-03-2017 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01910 1702f8b98df88bf43da1de410a8c51dc 176 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 174 35.678 T 09-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LS838_RS01910 1702f8b98df88bf43da1de410a8c51dc 176 SUPERFAMILY SSF56053 81 175 2.62E-36 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01910 1702f8b98df88bf43da1de410a8c51dc 176 Gene3D G3DSA:3.90.930.12 81 175 5.4E-40 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01910 1702f8b98df88bf43da1de410a8c51dc 176 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 174 1.1E-71 T 09-03-2017 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 LS838_RS01910 1702f8b98df88bf43da1de410a8c51dc 176 SUPERFAMILY SSF56053 1 80 1.7E-22 T 09-03-2017 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS00540 21ffc2a242083d46e798e04813528cd6 632 Gene3D G3DSA:3.40.50.300 295 508 1.7E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00540 21ffc2a242083d46e798e04813528cd6 632 SUPERFAMILY SSF52540 295 507 2.29E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00540 21ffc2a242083d46e798e04813528cd6 632 SUPERFAMILY SSF48334 26 287 6.41E-16 T 09-03-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LS838_RS00540 21ffc2a242083d46e798e04813528cd6 632 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 405 421 - T 09-03-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LS838_RS00540 21ffc2a242083d46e798e04813528cd6 632 Pfam PF05192 MutS domain III 44 280 2.9E-6 T 09-03-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LS838_RS00540 21ffc2a242083d46e798e04813528cd6 632 Pfam PF00488 MutS domain V 326 507 1.2E-39 T 09-03-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LS838_RS00540 21ffc2a242083d46e798e04813528cd6 632 SMART SM00533 7 312 1.0E-5 T 09-03-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LS838_RS00540 21ffc2a242083d46e798e04813528cd6 632 SMART SM00534 323 508 3.2E-58 T 09-03-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LS838_RS02980 62462484426ede338db06634bc1df93d 450 Gene3D G3DSA:3.40.120.10 178 252 1.0E-22 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS02980 62462484426ede338db06634bc1df93d 450 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 09-03-2017 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS02980 62462484426ede338db06634bc1df93d 450 Gene3D G3DSA:3.30.310.50 373 445 6.2E-20 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS02980 62462484426ede338db06634bc1df93d 450 SUPERFAMILY SSF53738 3 182 2.79E-44 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS02980 62462484426ede338db06634bc1df93d 450 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 443 1.0E-13 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS02980 62462484426ede338db06634bc1df93d 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 5.5E-15 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS02980 62462484426ede338db06634bc1df93d 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 5.5E-15 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS02980 62462484426ede338db06634bc1df93d 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 5.5E-15 T 09-03-2017 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS02980 62462484426ede338db06634bc1df93d 450 Gene3D G3DSA:3.40.120.10 253 372 1.7E-39 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS02980 62462484426ede338db06634bc1df93d 450 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 447 43.691 T 09-03-2017 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS02980 62462484426ede338db06634bc1df93d 450 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 138 1.7E-41 T 09-03-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS02980 62462484426ede338db06634bc1df93d 450 Gene3D G3DSA:3.40.120.10 3 153 9.4E-44 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS02980 62462484426ede338db06634bc1df93d 450 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 372 3.4E-34 T 09-03-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS02980 62462484426ede338db06634bc1df93d 450 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 161 256 1.7E-18 T 09-03-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS02980 62462484426ede338db06634bc1df93d 450 SUPERFAMILY SSF53738 160 258 1.26E-26 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS02980 62462484426ede338db06634bc1df93d 450 SUPERFAMILY SSF55957 360 449 2.49E-23 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS02980 62462484426ede338db06634bc1df93d 450 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 445 2.6E-174 T 09-03-2017 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS02980 62462484426ede338db06634bc1df93d 450 SUPERFAMILY SSF53738 260 369 3.3E-32 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS00395 2433d2807ded2b9c3b21450059ebdd15 219 SUPERFAMILY SSF46955 4 51 1.83E-11 T 09-03-2017 IPR009061 Putative DNA-binding domain LS838_RS00395 2433d2807ded2b9c3b21450059ebdd15 219 SMART SM00422 5 67 9.5E-7 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS00395 2433d2807ded2b9c3b21450059ebdd15 219 Pfam PF00239 Resolvase, N terminal domain 66 196 4.0E-21 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS00395 2433d2807ded2b9c3b21450059ebdd15 219 Gene3D G3DSA:3.40.50.1390 65 184 7.4E-19 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS00395 2433d2807ded2b9c3b21450059ebdd15 219 Pfam PF00376 MerR family regulatory protein 6 42 3.3E-12 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS00395 2433d2807ded2b9c3b21450059ebdd15 219 SUPERFAMILY SSF53041 65 198 2.35E-22 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS00395 2433d2807ded2b9c3b21450059ebdd15 219 SMART SM00857 65 205 1.4E-22 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS00395 2433d2807ded2b9c3b21450059ebdd15 219 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS00395 2433d2807ded2b9c3b21450059ebdd15 219 Gene3D G3DSA:1.10.1660.10 2 50 2.3E-12 T 09-03-2017 LS838_RS00395 2433d2807ded2b9c3b21450059ebdd15 219 ProSitePatterns PS00397 Site-specific recombinases active site. 68 76 - T 09-03-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 LS838_RS01980 92ab86abd973061add18b25c1dbd7b5a 287 SUPERFAMILY SSF52540 2 239 2.27E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01980 92ab86abd973061add18b25c1dbd7b5a 287 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS01980 92ab86abd973061add18b25c1dbd7b5a 287 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 279 9.7E-114 T 09-03-2017 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 LS838_RS01980 92ab86abd973061add18b25c1dbd7b5a 287 Pfam PF00005 ABC transporter 23 173 2.0E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS01980 92ab86abd973061add18b25c1dbd7b5a 287 SMART SM00382 32 222 3.1E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS01980 92ab86abd973061add18b25c1dbd7b5a 287 Gene3D G3DSA:3.40.50.300 2 237 2.4E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01380 8d3a8b683c775a57d3dc60b11ae703be 189 Gene3D G3DSA:3.40.50.2020 1 188 3.6E-63 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS01380 8d3a8b683c775a57d3dc60b11ae703be 189 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 188 3.3E-80 T 09-03-2017 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 LS838_RS01380 8d3a8b683c775a57d3dc60b11ae703be 189 Pfam PF00156 Phosphoribosyl transferase domain 53 157 6.4E-7 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 LS838_RS01380 8d3a8b683c775a57d3dc60b11ae703be 189 SUPERFAMILY SSF53271 1 187 3.21E-46 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS01380 8d3a8b683c775a57d3dc60b11ae703be 189 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 41.944 T 09-03-2017 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 LS838_RS02240 f415edb5b80da57da50706b4fc0c42be 108 Gene3D G3DSA:3.30.70.900 3 96 1.2E-19 T 09-03-2017 LS838_RS02240 f415edb5b80da57da50706b4fc0c42be 108 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 76 2.0E-13 T 09-03-2017 IPR007138 Antibiotic biosynthesis monooxygenase domain LS838_RS02240 f415edb5b80da57da50706b4fc0c42be 108 SUPERFAMILY SSF54909 3 93 5.37E-19 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel LS838_RS02450 f10be14666f7cd49b3bc7e2ede86c1cf 800 Gene3D G3DSA:3.40.50.970 409 606 3.3E-4 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold LS838_RS02450 f10be14666f7cd49b3bc7e2ede86c1cf 800 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 408 583 7.2E-71 T 09-03-2017 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 LS838_RS02450 f10be14666f7cd49b3bc7e2ede86c1cf 800 Pfam PF09364 XFP N-terminal domain 7 392 4.8E-172 T 09-03-2017 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal LS838_RS02450 f10be14666f7cd49b3bc7e2ede86c1cf 800 Pfam PF09363 XFP C-terminal domain 595 795 2.4E-73 T 09-03-2017 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 LS838_RS02450 f10be14666f7cd49b3bc7e2ede86c1cf 800 SUPERFAMILY SSF52518 384 601 2.27E-34 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold LS838_RS02450 f10be14666f7cd49b3bc7e2ede86c1cf 800 PIRSF PIRSF017245 1 797 0.0 T 09-03-2017 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 LS838_RS02450 f10be14666f7cd49b3bc7e2ede86c1cf 800 SUPERFAMILY SSF52518 3 376 5.09E-63 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold LS838_RS02450 f10be14666f7cd49b3bc7e2ede86c1cf 800 ProSitePatterns PS60002 Phosphoketolase signature 1. 142 148 - T 09-03-2017 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 LS838_RS02450 f10be14666f7cd49b3bc7e2ede86c1cf 800 Gene3D G3DSA:3.40.50.970 44 260 2.3E-11 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold LS838_RS02605 e117aa4a3fea76cf657ba2b8a00a19d1 523 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 3 523 47.606 T 09-03-2017 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 LS838_RS02605 e117aa4a3fea76cf657ba2b8a00a19d1 523 Gene3D G3DSA:3.40.50.300 7 279 3.9E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02605 e117aa4a3fea76cf657ba2b8a00a19d1 523 Gene3D G3DSA:2.40.30.10 290 388 1.1E-23 T 09-03-2017 LS838_RS02605 e117aa4a3fea76cf657ba2b8a00a19d1 523 SUPERFAMILY SSF54980 392 463 8.99E-17 T 09-03-2017 IPR009022 Elongation factor G, III-V domain LS838_RS02605 e117aa4a3fea76cf657ba2b8a00a19d1 523 Gene3D G3DSA:3.30.70.870 393 463 3.0E-14 T 09-03-2017 LS838_RS02605 e117aa4a3fea76cf657ba2b8a00a19d1 523 SUPERFAMILY SSF50447 258 388 2.36E-26 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain LS838_RS02605 e117aa4a3fea76cf657ba2b8a00a19d1 523 Pfam PF16658 Class II release factor RF3, C-terminal domain 386 510 7.7E-43 T 09-03-2017 IPR032090 Peptide chain release factor 3, C-terminal LS838_RS02605 e117aa4a3fea76cf657ba2b8a00a19d1 523 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 57 72 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site LS838_RS02605 e117aa4a3fea76cf657ba2b8a00a19d1 523 PRINTS PR00315 GTP-binding elongation factor signature 64 72 7.6E-11 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS02605 e117aa4a3fea76cf657ba2b8a00a19d1 523 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.6E-11 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS02605 e117aa4a3fea76cf657ba2b8a00a19d1 523 PRINTS PR00315 GTP-binding elongation factor signature 100 111 7.6E-11 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS02605 e117aa4a3fea76cf657ba2b8a00a19d1 523 PRINTS PR00315 GTP-binding elongation factor signature 136 145 7.6E-11 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS02605 e117aa4a3fea76cf657ba2b8a00a19d1 523 PRINTS PR00315 GTP-binding elongation factor signature 84 94 7.6E-11 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS02605 e117aa4a3fea76cf657ba2b8a00a19d1 523 SUPERFAMILY SSF52540 9 274 9.0E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02605 e117aa4a3fea76cf657ba2b8a00a19d1 523 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 520 3.4E-188 T 09-03-2017 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 LS838_RS02605 e117aa4a3fea76cf657ba2b8a00a19d1 523 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 147 2.4E-19 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LS838_RS02605 e117aa4a3fea76cf657ba2b8a00a19d1 523 Pfam PF00009 Elongation factor Tu GTP binding domain 11 274 3.1E-50 T 09-03-2017 LS838_RS02175 a56ea2de2cc23b6e2c441ae82e8676f6 476 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 142 156 - T 09-03-2017 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 LS838_RS02175 a56ea2de2cc23b6e2c441ae82e8676f6 476 SUPERFAMILY SSF89095 298 401 5.06E-31 T 09-03-2017 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 LS838_RS02175 a56ea2de2cc23b6e2c441ae82e8676f6 476 SUPERFAMILY SSF55931 6 294 4.84E-112 T 09-03-2017 LS838_RS02175 a56ea2de2cc23b6e2c441ae82e8676f6 476 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 474 35.769 T 09-03-2017 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 LS838_RS02175 a56ea2de2cc23b6e2c441ae82e8676f6 476 SMART SM00845 326 473 1.9E-74 T 09-03-2017 IPR018027 Asn/Gln amidotransferase GO:0016884 LS838_RS02175 a56ea2de2cc23b6e2c441ae82e8676f6 476 Pfam PF02637 GatB domain 326 472 3.4E-54 T 09-03-2017 IPR018027 Asn/Gln amidotransferase GO:0016884 LS838_RS02175 a56ea2de2cc23b6e2c441ae82e8676f6 476 Gene3D G3DSA:1.10.10.410 411 473 2.9E-4 T 09-03-2017 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal LS838_RS02175 a56ea2de2cc23b6e2c441ae82e8676f6 476 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 471 3.8E-167 T 09-03-2017 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 LS838_RS02175 a56ea2de2cc23b6e2c441ae82e8676f6 476 Pfam PF02934 GatB/GatE catalytic domain 6 287 9.8E-103 T 09-03-2017 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 LS838_RS04055 4108b43396753ec06ff03134a1a81a59 753 SMART SM00954 240 350 7.0E-71 T 09-03-2017 IPR007685 RelA/SpoT GO:0015969 LS838_RS04055 4108b43396753ec06ff03134a1a81a59 753 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 31 750 1.3E-244 T 09-03-2017 IPR004811 RelA/SpoT family GO:0015969 LS838_RS04055 4108b43396753ec06ff03134a1a81a59 753 SUPERFAMILY SSF55021 682 750 1.73E-6 T 09-03-2017 LS838_RS04055 4108b43396753ec06ff03134a1a81a59 753 Pfam PF13291 ACT domain 673 750 1.5E-18 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 LS838_RS04055 4108b43396753ec06ff03134a1a81a59 753 Pfam PF04607 Region found in RelA / SpoT proteins 240 349 6.3E-40 T 09-03-2017 IPR007685 RelA/SpoT GO:0015969 LS838_RS04055 4108b43396753ec06ff03134a1a81a59 753 Gene3D G3DSA:3.10.20.30 394 454 1.8E-22 T 09-03-2017 IPR012675 Beta-grasp domain LS838_RS04055 4108b43396753ec06ff03134a1a81a59 753 SUPERFAMILY SSF109604 9 195 2.39E-73 T 09-03-2017 LS838_RS04055 4108b43396753ec06ff03134a1a81a59 753 SMART SM00471 46 158 4.3E-7 T 09-03-2017 IPR003607 HD/PDEase domain LS838_RS04055 4108b43396753ec06ff03134a1a81a59 753 SUPERFAMILY SSF81271 381 453 1.46E-22 T 09-03-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 LS838_RS04055 4108b43396753ec06ff03134a1a81a59 753 Pfam PF02824 TGS domain 394 453 4.6E-23 T 09-03-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 LS838_RS04055 4108b43396753ec06ff03134a1a81a59 753 Gene3D G3DSA:3.30.70.260 682 748 2.5E-7 T 09-03-2017 LS838_RS04055 4108b43396753ec06ff03134a1a81a59 753 Gene3D G3DSA:3.30.460.10 183 329 6.7E-53 T 09-03-2017 LS838_RS04055 4108b43396753ec06ff03134a1a81a59 753 SUPERFAMILY SSF81301 185 398 9.32E-67 T 09-03-2017 LS838_RS04055 4108b43396753ec06ff03134a1a81a59 753 Pfam PF13328 HD domain 31 180 2.0E-49 T 09-03-2017 IPR003607 HD/PDEase domain LS838_RS05280 a56c1a5ddd06ca16187862b0f78c2068 474 SUPERFAMILY SSF53335 3 292 2.24E-64 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS05280 a56c1a5ddd06ca16187862b0f78c2068 474 Pfam PF17126 RsmF rRNA methyltransferase first C-terminal domain 355 407 2.7E-14 T 09-03-2017 IPR031340 Ribosomal RNA small subunit methyltransferase F, first C-terminal domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS05280 a56c1a5ddd06ca16187862b0f78c2068 474 Pfam PF01189 16S rRNA methyltransferase RsmB/F 92 291 3.2E-43 T 09-03-2017 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS05280 a56c1a5ddd06ca16187862b0f78c2068 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 275 292 6.8E-24 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS05280 a56c1a5ddd06ca16187862b0f78c2068 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 71 85 6.8E-24 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS05280 a56c1a5ddd06ca16187862b0f78c2068 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 167 179 6.8E-24 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS05280 a56c1a5ddd06ca16187862b0f78c2068 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 217 233 6.8E-24 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS05280 a56c1a5ddd06ca16187862b0f78c2068 474 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 100 110 6.8E-24 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS05280 a56c1a5ddd06ca16187862b0f78c2068 474 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 4 85 2.5E-14 T 09-03-2017 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901 LS838_RS05280 a56c1a5ddd06ca16187862b0f78c2068 474 Gene3D G3DSA:3.40.50.150 82 292 2.4E-61 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS05280 a56c1a5ddd06ca16187862b0f78c2068 474 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 427 473 4.1E-16 T 09-03-2017 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS05280 a56c1a5ddd06ca16187862b0f78c2068 474 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 166 177 - T 09-03-2017 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS03110 a5deedabb12b49cc42270419d6811899 395 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 09-03-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LS838_RS03110 a5deedabb12b49cc42270419d6811899 395 Pfam PF00871 Acetokinase family 3 384 6.8E-133 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LS838_RS03110 a5deedabb12b49cc42270419d6811899 395 SUPERFAMILY SSF53067 156 391 8.26E-84 T 09-03-2017 LS838_RS03110 a5deedabb12b49cc42270419d6811899 395 PRINTS PR00471 Acetate kinase family signature 320 336 1.1E-36 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LS838_RS03110 a5deedabb12b49cc42270419d6811899 395 PRINTS PR00471 Acetate kinase family signature 373 385 1.1E-36 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LS838_RS03110 a5deedabb12b49cc42270419d6811899 395 PRINTS PR00471 Acetate kinase family signature 173 186 1.1E-36 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LS838_RS03110 a5deedabb12b49cc42270419d6811899 395 PRINTS PR00471 Acetate kinase family signature 298 311 1.1E-36 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LS838_RS03110 a5deedabb12b49cc42270419d6811899 395 PRINTS PR00471 Acetate kinase family signature 203 224 1.1E-36 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LS838_RS03110 a5deedabb12b49cc42270419d6811899 395 PRINTS PR00471 Acetate kinase family signature 4 15 1.1E-36 T 09-03-2017 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LS838_RS03110 a5deedabb12b49cc42270419d6811899 395 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 09-03-2017 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LS838_RS03110 a5deedabb12b49cc42270419d6811899 395 Gene3D G3DSA:3.30.420.40 142 204 1.4E-7 T 09-03-2017 LS838_RS03110 a5deedabb12b49cc42270419d6811899 395 PIRSF PIRSF000722 1 395 8.0E-135 T 09-03-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LS838_RS03110 a5deedabb12b49cc42270419d6811899 395 Hamap MF_00020 Acetate kinase [ackA]. 1 395 172.393 T 09-03-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LS838_RS03110 a5deedabb12b49cc42270419d6811899 395 TIGRFAM TIGR00016 ackA: acetate kinase 2 392 1.3E-140 T 09-03-2017 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 LS838_RS03110 a5deedabb12b49cc42270419d6811899 395 SUPERFAMILY SSF53067 1 196 3.5E-61 T 09-03-2017 LS838_RS03110 a5deedabb12b49cc42270419d6811899 395 Gene3D G3DSA:3.30.420.40 205 391 5.0E-73 T 09-03-2017 LS838_RS06380 74421223b1109f0a548b52271bc2a0aa 224 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 206 2.6E-43 T 09-03-2017 LS838_RS06380 74421223b1109f0a548b52271bc2a0aa 224 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 218 43.902 T 09-03-2017 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 LS838_RS06380 74421223b1109f0a548b52271bc2a0aa 224 PIRSF PIRSF001586 1 223 6.2E-86 T 09-03-2017 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 LS838_RS06380 74421223b1109f0a548b52271bc2a0aa 224 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 219 1.2E-93 T 09-03-2017 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 LS838_RS06380 74421223b1109f0a548b52271bc2a0aa 224 Gene3D G3DSA:3.40.50.880 1 220 2.2E-42 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS06380 74421223b1109f0a548b52271bc2a0aa 224 SUPERFAMILY SSF52317 1 218 2.64E-75 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS06380 74421223b1109f0a548b52271bc2a0aa 224 SMART SM01211 1 220 2.1E-133 T 09-03-2017 LS838_RS06060 1a56e8e120f763fd8cc749a3af8d86a0 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 113 9.1E-48 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06060 1a56e8e120f763fd8cc749a3af8d86a0 115 SUPERFAMILY SSF50104 3 114 5.82E-44 T 09-03-2017 IPR008991 Translation protein SH3-like domain LS838_RS06060 1a56e8e120f763fd8cc749a3af8d86a0 115 PIRSF PIRSF002191 1 115 4.8E-47 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06060 1a56e8e120f763fd8cc749a3af8d86a0 115 Pfam PF01245 Ribosomal protein L19 4 113 4.5E-49 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06060 1a56e8e120f763fd8cc749a3af8d86a0 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 09-03-2017 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS06060 1a56e8e120f763fd8cc749a3af8d86a0 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.1E-42 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06060 1a56e8e120f763fd8cc749a3af8d86a0 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.1E-42 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06060 1a56e8e120f763fd8cc749a3af8d86a0 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.1E-42 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06060 1a56e8e120f763fd8cc749a3af8d86a0 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.353 T 09-03-2017 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06540 7baa56e93e1fbe6000f3db4c610d5f40 190 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 7 183 8.4E-33 T 09-03-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase LS838_RS06540 7baa56e93e1fbe6000f3db4c610d5f40 190 PIRSF PIRSF006806 2 187 5.8E-31 T 09-03-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase LS838_RS06540 7baa56e93e1fbe6000f3db4c610d5f40 190 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 11 182 9.3E-28 T 09-03-2017 IPR002698 5-formyltetrahydrofolate cyclo-ligase LS838_RS06540 7baa56e93e1fbe6000f3db4c610d5f40 190 Gene3D G3DSA:3.40.50.10420 6 182 1.3E-38 T 09-03-2017 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain LS838_RS06540 7baa56e93e1fbe6000f3db4c610d5f40 190 SUPERFAMILY SSF100950 5 182 1.67E-37 T 09-03-2017 LS838_RS01040 3405be45467d3119564c02aab6a9bc99 208 SUPERFAMILY SSF52540 15 207 5.84E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01040 3405be45467d3119564c02aab6a9bc99 208 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS01040 3405be45467d3119564c02aab6a9bc99 208 Gene3D G3DSA:3.40.50.300 6 206 2.9E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01040 3405be45467d3119564c02aab6a9bc99 208 SMART SM00382 30 208 1.9E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS01040 3405be45467d3119564c02aab6a9bc99 208 Pfam PF00005 ABC transporter 22 163 1.1E-26 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS03445 699cdeb160355ef02ea36cd3b28eec33 387 SUPERFAMILY SSF53383 3 380 2.06E-98 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase LS838_RS03445 699cdeb160355ef02ea36cd3b28eec33 387 Pfam PF00266 Aminotransferase class-V 4 369 1.5E-79 T 09-03-2017 IPR000192 Aminotransferase class V domain LS838_RS03445 699cdeb160355ef02ea36cd3b28eec33 387 PIRSF PIRSF005572 1 384 1.1E-111 T 09-03-2017 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 LS838_RS03445 699cdeb160355ef02ea36cd3b28eec33 387 Gene3D G3DSA:3.40.640.10 16 247 8.3E-83 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LS838_RS03445 699cdeb160355ef02ea36cd3b28eec33 387 Gene3D G3DSA:3.90.1150.10 248 375 5.1E-30 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LS838_RS00065 432df6dde66be9f25d373cfe3f8dbe34 385 Pfam PF11187 Protein of unknown function (DUF2974) 74 298 1.7E-77 T 09-03-2017 IPR024499 Protein of unknown function DUF2974 LS838_RS00065 432df6dde66be9f25d373cfe3f8dbe34 385 SUPERFAMILY SSF53474 72 214 2.22E-17 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS00065 432df6dde66be9f25d373cfe3f8dbe34 385 Gene3D G3DSA:3.40.50.1820 107 213 1.8E-11 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS07885 e7f041eee99c449c6bebc6880588ee91 573 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 325 452 3.2E-20 T 09-03-2017 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS07885 e7f041eee99c449c6bebc6880588ee91 573 SUPERFAMILY SSF53738 305 454 8.24E-27 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS07885 e7f041eee99c449c6bebc6880588ee91 573 Gene3D G3DSA:3.40.120.10 231 309 3.0E-17 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS07885 e7f041eee99c449c6bebc6880588ee91 573 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 42 174 1.8E-34 T 09-03-2017 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS07885 e7f041eee99c449c6bebc6880588ee91 573 Gene3D G3DSA:3.30.310.50 481 572 1.6E-21 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS07885 e7f041eee99c449c6bebc6880588ee91 573 SUPERFAMILY SSF55957 445 482 6.41E-14 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS07885 e7f041eee99c449c6bebc6880588ee91 573 SUPERFAMILY SSF55957 513 572 6.41E-14 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS07885 e7f041eee99c449c6bebc6880588ee91 573 SUPERFAMILY SSF53738 208 314 5.89E-18 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS07885 e7f041eee99c449c6bebc6880588ee91 573 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 493 558 4.9E-8 T 09-03-2017 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS07885 e7f041eee99c449c6bebc6880588ee91 573 Gene3D G3DSA:3.40.120.10 310 456 7.7E-34 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS07885 e7f041eee99c449c6bebc6880588ee91 573 SUPERFAMILY SSF53738 29 237 4.32E-41 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS07885 e7f041eee99c449c6bebc6880588ee91 573 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 209 316 5.9E-22 T 09-03-2017 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS07885 e7f041eee99c449c6bebc6880588ee91 573 Gene3D G3DSA:3.40.120.10 28 215 2.3E-52 T 09-03-2017 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 LS838_RS00030 627c2a5a10388a1f0e6937fd1700d8f4 823 SMART SM00434 15 468 3.1E-267 T 09-03-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS00030 627c2a5a10388a1f0e6937fd1700d8f4 823 SUPERFAMILY SSF56719 35 490 1.7E-175 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 LS838_RS00030 627c2a5a10388a1f0e6937fd1700d8f4 823 Gene3D G3DSA:3.90.199.10 35 239 3.3E-121 T 09-03-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 LS838_RS00030 627c2a5a10388a1f0e6937fd1700d8f4 823 Gene3D G3DSA:3.90.199.10 337 402 3.3E-121 T 09-03-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 LS838_RS00030 627c2a5a10388a1f0e6937fd1700d8f4 823 SUPERFAMILY SSF101904 503 819 1.96E-105 T 09-03-2017 LS838_RS00030 627c2a5a10388a1f0e6937fd1700d8f4 823 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 12 809 0.0 T 09-03-2017 LS838_RS00030 627c2a5a10388a1f0e6937fd1700d8f4 823 Gene3D G3DSA:3.30.1360.40 240 336 1.2E-35 T 09-03-2017 IPR024946 Arginine repressor C-terminal-like domain LS838_RS00030 627c2a5a10388a1f0e6937fd1700d8f4 823 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 4 811 24.007 T 09-03-2017 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LS838_RS00030 627c2a5a10388a1f0e6937fd1700d8f4 823 Gene3D G3DSA:2.120.10.90 500 809 8.3E-120 T 09-03-2017 LS838_RS00030 627c2a5a10388a1f0e6937fd1700d8f4 823 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 475 9.8E-157 T 09-03-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS00030 627c2a5a10388a1f0e6937fd1700d8f4 823 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 508 551 1.6E-10 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LS838_RS00030 627c2a5a10388a1f0e6937fd1700d8f4 823 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 662 704 3.1E-14 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LS838_RS00030 627c2a5a10388a1f0e6937fd1700d8f4 823 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 614 658 4.3E-8 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LS838_RS00030 627c2a5a10388a1f0e6937fd1700d8f4 823 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 558 605 1.6E-7 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LS838_RS00030 627c2a5a10388a1f0e6937fd1700d8f4 823 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 712 760 2.0E-12 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LS838_RS00030 627c2a5a10388a1f0e6937fd1700d8f4 823 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 764 810 7.7E-12 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LS838_RS01650 e869db2b406a81ebdd694e0aa086eec7 481 SMART SM00490 255 336 3.0E-35 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS01650 e869db2b406a81ebdd694e0aa086eec7 481 SMART SM00487 20 219 9.4E-63 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LS838_RS01650 e869db2b406a81ebdd694e0aa086eec7 481 Gene3D G3DSA:3.40.50.300 209 368 2.5E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01650 e869db2b406a81ebdd694e0aa086eec7 481 Gene3D G3DSA:3.40.50.300 2 208 1.2E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01650 e869db2b406a81ebdd694e0aa086eec7 481 Pfam PF00270 DEAD/DEAH box helicase 25 192 6.1E-50 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LS838_RS01650 e869db2b406a81ebdd694e0aa086eec7 481 Pfam PF00271 Helicase conserved C-terminal domain 228 336 8.7E-30 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS01650 e869db2b406a81ebdd694e0aa086eec7 481 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 150 158 - T 09-03-2017 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site LS838_RS01650 e869db2b406a81ebdd694e0aa086eec7 481 SUPERFAMILY SSF52540 72 357 3.65E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00830 2caab145e75922442c8e4eb1904ace19 941 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 390 489 2.4E-12 T 09-03-2017 IPR000160 GGDEF domain LS838_RS00830 2caab145e75922442c8e4eb1904ace19 941 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 254 378 2.6E-11 T 09-03-2017 IPR000160 GGDEF domain LS838_RS00830 2caab145e75922442c8e4eb1904ace19 941 Gene3D G3DSA:3.30.70.270 238 380 2.8E-17 T 09-03-2017 LS838_RS00830 2caab145e75922442c8e4eb1904ace19 941 Gene3D G3DSA:3.30.70.270 391 544 5.8E-17 T 09-03-2017 LS838_RS00830 2caab145e75922442c8e4eb1904ace19 941 SUPERFAMILY SSF141868 555 800 1.44E-65 T 09-03-2017 IPR001633 EAL domain LS838_RS00830 2caab145e75922442c8e4eb1904ace19 941 SMART SM00052 548 794 9.8E-64 T 09-03-2017 IPR001633 EAL domain LS838_RS00830 2caab145e75922442c8e4eb1904ace19 941 SUPERFAMILY SSF55073 234 379 2.82E-15 T 09-03-2017 IPR029787 Nucleotide cyclase LS838_RS00830 2caab145e75922442c8e4eb1904ace19 941 SUPERFAMILY SSF55073 395 534 3.3E-15 T 09-03-2017 IPR029787 Nucleotide cyclase LS838_RS00830 2caab145e75922442c8e4eb1904ace19 941 Pfam PF00563 EAL domain 554 789 8.0E-57 T 09-03-2017 IPR001633 EAL domain LS838_RS00830 2caab145e75922442c8e4eb1904ace19 941 Pfam PF00990 Diguanylate cyclase, GGDEF domain 391 496 3.9E-15 T 09-03-2017 IPR000160 GGDEF domain LS838_RS00830 2caab145e75922442c8e4eb1904ace19 941 Pfam PF00990 Diguanylate cyclase, GGDEF domain 233 378 7.4E-15 T 09-03-2017 IPR000160 GGDEF domain LS838_RS00830 2caab145e75922442c8e4eb1904ace19 941 SMART SM00267 380 538 1.6E-5 T 09-03-2017 IPR000160 GGDEF domain LS838_RS00830 2caab145e75922442c8e4eb1904ace19 941 SMART SM00267 217 379 2.7E-7 T 09-03-2017 IPR000160 GGDEF domain LS838_RS00830 2caab145e75922442c8e4eb1904ace19 941 Gene3D G3DSA:3.20.20.450 555 797 4.2E-70 T 09-03-2017 IPR001633 EAL domain LS838_RS03540 817fd0a0aada3d68516da441fa7b47b2 83 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 17 79 2.0E-16 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS03540 817fd0a0aada3d68516da441fa7b47b2 83 Gene3D G3DSA:1.20.58.110 1 83 2.5E-23 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS03540 817fd0a0aada3d68516da441fa7b47b2 83 SUPERFAMILY SSF46992 4 83 1.44E-22 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS03540 817fd0a0aada3d68516da441fa7b47b2 83 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 81 2.4E-19 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS03540 817fd0a0aada3d68516da441fa7b47b2 83 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 83 13.139 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS03540 817fd0a0aada3d68516da441fa7b47b2 83 Pfam PF01649 Ribosomal protein S20 2 81 8.9E-23 T 09-03-2017 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS03245 ee4bb176c3ce9c5888b24ae8dce31d46 329 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 60 83 9.1E-52 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LS838_RS03245 ee4bb176c3ce9c5888b24ae8dce31d46 329 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 123 142 9.1E-52 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LS838_RS03245 ee4bb176c3ce9c5888b24ae8dce31d46 329 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 178 198 9.1E-52 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LS838_RS03245 ee4bb176c3ce9c5888b24ae8dce31d46 329 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 291 317 9.1E-52 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LS838_RS03245 ee4bb176c3ce9c5888b24ae8dce31d46 329 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 40 58 9.1E-52 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LS838_RS03245 ee4bb176c3ce9c5888b24ae8dce31d46 329 Gene3D G3DSA:3.90.640.10 178 249 5.2E-30 T 09-03-2017 LS838_RS03245 ee4bb176c3ce9c5888b24ae8dce31d46 329 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 2 327 1.0E-129 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LS838_RS03245 ee4bb176c3ce9c5888b24ae8dce31d46 329 Gene3D G3DSA:3.30.420.40 254 308 5.9E-33 T 09-03-2017 LS838_RS03245 ee4bb176c3ce9c5888b24ae8dce31d46 329 Gene3D G3DSA:3.30.420.40 151 177 5.9E-33 T 09-03-2017 LS838_RS03245 ee4bb176c3ce9c5888b24ae8dce31d46 329 Gene3D G3DSA:3.30.420.40 2 150 8.2E-39 T 09-03-2017 LS838_RS03245 ee4bb176c3ce9c5888b24ae8dce31d46 329 Pfam PF06723 MreB/Mbl protein 2 327 1.1E-139 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LS838_RS03245 ee4bb176c3ce9c5888b24ae8dce31d46 329 SUPERFAMILY SSF53067 140 326 4.6E-48 T 09-03-2017 LS838_RS03245 ee4bb176c3ce9c5888b24ae8dce31d46 329 SUPERFAMILY SSF53067 2 139 7.13E-35 T 09-03-2017 LS838_RS03775 4dcf03d77bbb55207de59f7542eed0ea 358 TIGRFAM TIGR01027 proB: glutamate 5-kinase 6 343 8.4E-130 T 09-03-2017 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 LS838_RS03775 4dcf03d77bbb55207de59f7542eed0ea 358 ProSitePatterns PS00902 Glutamate 5-kinase signature. 206 223 - T 09-03-2017 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 LS838_RS03775 4dcf03d77bbb55207de59f7542eed0ea 358 Gene3D G3DSA:3.40.1160.10 4 254 4.9E-61 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase LS838_RS03775 4dcf03d77bbb55207de59f7542eed0ea 358 PRINTS PR00474 Glutamate 5-kinase family signature 115 136 6.7E-49 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 LS838_RS03775 4dcf03d77bbb55207de59f7542eed0ea 358 PRINTS PR00474 Glutamate 5-kinase family signature 41 55 6.7E-49 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 LS838_RS03775 4dcf03d77bbb55207de59f7542eed0ea 358 PRINTS PR00474 Glutamate 5-kinase family signature 75 103 6.7E-49 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 LS838_RS03775 4dcf03d77bbb55207de59f7542eed0ea 358 PRINTS PR00474 Glutamate 5-kinase family signature 147 174 6.7E-49 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 LS838_RS03775 4dcf03d77bbb55207de59f7542eed0ea 358 PRINTS PR00474 Glutamate 5-kinase family signature 208 228 6.7E-49 T 09-03-2017 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 LS838_RS03775 4dcf03d77bbb55207de59f7542eed0ea 358 SMART SM00359 275 356 1.7E-6 T 09-03-2017 IPR002478 PUA domain GO:0003723 LS838_RS03775 4dcf03d77bbb55207de59f7542eed0ea 358 PIRSF PIRSF000729 1 354 5.7E-131 T 09-03-2017 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 LS838_RS03775 4dcf03d77bbb55207de59f7542eed0ea 358 SUPERFAMILY SSF88697 276 355 4.2E-13 T 09-03-2017 IPR015947 PUA-like domain LS838_RS03775 4dcf03d77bbb55207de59f7542eed0ea 358 Hamap MF_00456 Glutamate 5-kinase [proB]. 4 256 35.459 T 09-03-2017 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 LS838_RS03775 4dcf03d77bbb55207de59f7542eed0ea 358 Pfam PF01472 PUA domain 276 341 1.4E-13 T 09-03-2017 IPR002478 PUA domain GO:0003723 LS838_RS03775 4dcf03d77bbb55207de59f7542eed0ea 358 Gene3D G3DSA:2.30.130.10 273 355 3.6E-20 T 09-03-2017 IPR015947 PUA-like domain LS838_RS03775 4dcf03d77bbb55207de59f7542eed0ea 358 Pfam PF00696 Amino acid kinase family 5 234 2.2E-46 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase LS838_RS03775 4dcf03d77bbb55207de59f7542eed0ea 358 SUPERFAMILY SSF53633 5 254 2.62E-68 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase LS838_RS01955 6c9f1546721dab87eaf4b70a36b25909 116 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 116 25.943 T 09-03-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01955 6c9f1546721dab87eaf4b70a36b25909 116 SUPERFAMILY SSF46946 2 113 3.14E-46 T 09-03-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 LS838_RS01955 6c9f1546721dab87eaf4b70a36b25909 116 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 09-03-2017 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01955 6c9f1546721dab87eaf4b70a36b25909 116 Pfam PF00416 Ribosomal protein S13/S18 3 108 8.2E-33 T 09-03-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01955 6c9f1546721dab87eaf4b70a36b25909 116 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.2E-52 T 09-03-2017 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01955 6c9f1546721dab87eaf4b70a36b25909 116 Gene3D G3DSA:1.10.8.50 1 71 2.9E-31 T 09-03-2017 LS838_RS01955 6c9f1546721dab87eaf4b70a36b25909 116 PIRSF PIRSF002134 1 116 2.3E-43 T 09-03-2017 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01955 6c9f1546721dab87eaf4b70a36b25909 116 Gene3D G3DSA:4.10.910.10 72 113 4.3E-25 T 09-03-2017 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS00560 fd31f95d19b2a2ea01a04df143cfef82 153 Gene3D G3DSA:3.30.70.1290 4 130 5.3E-43 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LS838_RS00560 fd31f95d19b2a2ea01a04df143cfef82 153 SMART SM01321 9 129 6.6E-35 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LS838_RS00560 fd31f95d19b2a2ea01a04df143cfef82 153 SUPERFAMILY SSF143422 3 129 4.19E-39 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LS838_RS00560 fd31f95d19b2a2ea01a04df143cfef82 153 Pfam PF01797 Transposase IS200 like 9 129 2.3E-36 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LS838_RS03765 6a7d73b7bc38ad4bd6d9a4b707f87105 257 PIRSF PIRSF000193 1 257 4.6E-77 T 09-03-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 LS838_RS03765 6a7d73b7bc38ad4bd6d9a4b707f87105 257 Gene3D G3DSA:1.10.3730.10 151 256 1.9E-43 T 09-03-2017 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 LS838_RS03765 6a7d73b7bc38ad4bd6d9a4b707f87105 257 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 3 256 9.8E-81 T 09-03-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 LS838_RS03765 6a7d73b7bc38ad4bd6d9a4b707f87105 257 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 212 234 - T 09-03-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 LS838_RS03765 6a7d73b7bc38ad4bd6d9a4b707f87105 257 SUPERFAMILY SSF48179 151 257 1.12E-36 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LS838_RS03765 6a7d73b7bc38ad4bd6d9a4b707f87105 257 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 92 7.6E-19 T 09-03-2017 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal LS838_RS03765 6a7d73b7bc38ad4bd6d9a4b707f87105 257 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 256 26.797 T 09-03-2017 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 LS838_RS03765 6a7d73b7bc38ad4bd6d9a4b707f87105 257 Gene3D G3DSA:3.40.50.720 2 149 7.2E-39 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS03765 6a7d73b7bc38ad4bd6d9a4b707f87105 257 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 152 256 3.2E-40 T 09-03-2017 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 LS838_RS03765 6a7d73b7bc38ad4bd6d9a4b707f87105 257 SUPERFAMILY SSF51735 1 149 3.53E-32 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS09105 16fdd2743a75191bcafd440b9d952e3f 614 Gene3D G3DSA:3.40.50.300 374 605 5.2E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09105 16fdd2743a75191bcafd440b9d952e3f 614 SUPERFAMILY SSF52540 364 608 3.36E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09105 16fdd2743a75191bcafd440b9d952e3f 614 Pfam PF00664 ABC transporter transmembrane region 30 308 3.5E-51 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS09105 16fdd2743a75191bcafd440b9d952e3f 614 Gene3D G3DSA:1.20.1560.10 17 338 1.9E-76 T 09-03-2017 LS838_RS09105 16fdd2743a75191bcafd440b9d952e3f 614 ProSitePatterns PS00211 ABC transporters family signature. 512 526 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS09105 16fdd2743a75191bcafd440b9d952e3f 614 SMART SM00382 400 572 3.7E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS09105 16fdd2743a75191bcafd440b9d952e3f 614 Pfam PF00005 ABC transporter 391 540 6.6E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS09105 16fdd2743a75191bcafd440b9d952e3f 614 SUPERFAMILY SSF90123 17 340 6.41E-74 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS02780 85062a9dd5f1e80037a2fbcfae57606f 185 Gene3D G3DSA:3.30.160.100 3 95 4.3E-34 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LS838_RS02780 85062a9dd5f1e80037a2fbcfae57606f 185 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 3 103 1.2E-30 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LS838_RS02780 85062a9dd5f1e80037a2fbcfae57606f 185 SUPERFAMILY SSF69754 3 112 4.58E-32 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LS838_RS02780 85062a9dd5f1e80037a2fbcfae57606f 185 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 96 5.2E-28 T 09-03-2017 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 LS838_RS02780 85062a9dd5f1e80037a2fbcfae57606f 185 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 127 180 8.8E-28 T 09-03-2017 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal LS838_RS06150 d13980a1a92eaf96c4b8db3cff25e8e5 330 SUPERFAMILY SSF53659 3 328 2.47E-93 T 09-03-2017 LS838_RS06150 d13980a1a92eaf96c4b8db3cff25e8e5 330 Pfam PF02504 Fatty acid synthesis protein 3 319 7.4E-98 T 09-03-2017 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 LS838_RS06150 d13980a1a92eaf96c4b8db3cff25e8e5 330 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 330 131.908 T 09-03-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 LS838_RS06150 d13980a1a92eaf96c4b8db3cff25e8e5 330 Gene3D G3DSA:3.40.718.10 2 329 4.1E-121 T 09-03-2017 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 LS838_RS06150 d13980a1a92eaf96c4b8db3cff25e8e5 330 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 329 9.1E-107 T 09-03-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 LS838_RS06150 d13980a1a92eaf96c4b8db3cff25e8e5 330 PIRSF PIRSF002465 1 330 5.3E-117 T 09-03-2017 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 LS838_RS00950 a98456e17efe8bb2fb24f272a80f7fc4 288 Gene3D G3DSA:3.40.50.1820 5 269 7.0E-53 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS00950 a98456e17efe8bb2fb24f272a80f7fc4 288 Pfam PF07859 alpha/beta hydrolase fold 42 159 6.7E-8 T 09-03-2017 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 LS838_RS00950 a98456e17efe8bb2fb24f272a80f7fc4 288 SUPERFAMILY SSF53474 30 270 1.08E-27 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS03385 f0adf873595fb5eba1d81da1e2ee1b64 370 SUPERFAMILY SSF53756 1 368 5.86E-103 T 09-03-2017 LS838_RS03385 f0adf873595fb5eba1d81da1e2ee1b64 370 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 193 358 3.2E-38 T 09-03-2017 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 LS838_RS03385 f0adf873595fb5eba1d81da1e2ee1b64 370 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 3 367 31.833 T 09-03-2017 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 LS838_RS03385 f0adf873595fb5eba1d81da1e2ee1b64 370 Gene3D G3DSA:3.40.50.2000 1 205 1.5E-62 T 09-03-2017 LS838_RS03385 f0adf873595fb5eba1d81da1e2ee1b64 370 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 143 3.0E-40 T 09-03-2017 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 LS838_RS03385 f0adf873595fb5eba1d81da1e2ee1b64 370 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 362 1.1E-89 T 09-03-2017 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 LS838_RS03385 f0adf873595fb5eba1d81da1e2ee1b64 370 Gene3D G3DSA:3.40.50.2000 238 348 5.5E-8 T 09-03-2017 LS838_RS03525 6111a12d21785e93c18a209752a8753d 250 SUPERFAMILY SSF47781 178 249 1.33E-29 T 09-03-2017 IPR010994 RuvA domain 2-like LS838_RS03525 6111a12d21785e93c18a209752a8753d 250 SMART SM00278 198 217 0.0031 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LS838_RS03525 6111a12d21785e93c18a209752a8753d 250 SMART SM00278 228 247 10.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LS838_RS03525 6111a12d21785e93c18a209752a8753d 250 Pfam PF12836 Helix-hairpin-helix motif 188 249 3.5E-25 T 09-03-2017 LS838_RS03525 6111a12d21785e93c18a209752a8753d 250 Gene3D G3DSA:3.10.560.10 93 131 1.1E-7 T 09-03-2017 LS838_RS03525 6111a12d21785e93c18a209752a8753d 250 Gene3D G3DSA:1.10.150.320 181 250 1.1E-22 T 09-03-2017 LS838_RS03525 6111a12d21785e93c18a209752a8753d 250 Pfam PF10531 SLBB domain 93 145 2.0E-12 T 09-03-2017 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LS838_RS03525 6111a12d21785e93c18a209752a8753d 250 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 186 250 1.0E-23 T 09-03-2017 IPR004509 Competence protein ComEA, helix-hairpin-helix domain LS838_RS02445 5a614d710091b4fce95c415925f7ebd5 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 67 3.6E-15 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LS838_RS02445 5a614d710091b4fce95c415925f7ebd5 240 SUPERFAMILY SSF46785 5 71 3.16E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS02445 5a614d710091b4fce95c415925f7ebd5 240 Gene3D G3DSA:1.10.10.10 5 69 4.9E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS02445 5a614d710091b4fce95c415925f7ebd5 240 SMART SM00345 9 67 9.6E-13 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LS838_RS02445 5a614d710091b4fce95c415925f7ebd5 240 Pfam PF07702 UTRA domain 95 230 3.1E-30 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LS838_RS02445 5a614d710091b4fce95c415925f7ebd5 240 SMART SM00866 93 232 9.3E-34 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LS838_RS02445 5a614d710091b4fce95c415925f7ebd5 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 4.0E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LS838_RS02445 5a614d710091b4fce95c415925f7ebd5 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 4.0E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LS838_RS02445 5a614d710091b4fce95c415925f7ebd5 240 Gene3D G3DSA:3.40.1410.10 88 237 2.3E-48 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LS838_RS02445 5a614d710091b4fce95c415925f7ebd5 240 SUPERFAMILY SSF64288 55 238 2.04E-41 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LS838_RS06740 1fd388646d55d427c69d4caf65d469fe 349 Pfam PF00665 Integrase core domain 188 299 1.7E-10 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 LS838_RS06740 1fd388646d55d427c69d4caf65d469fe 349 Gene3D G3DSA:3.30.420.10 188 338 1.8E-11 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS06740 1fd388646d55d427c69d4caf65d469fe 349 Pfam PF13936 Helix-turn-helix domain 13 56 2.1E-17 T 09-03-2017 IPR025246 Transposase IS30-like HTH domain LS838_RS06740 1fd388646d55d427c69d4caf65d469fe 349 SUPERFAMILY SSF53098 188 338 1.13E-23 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS06740 1fd388646d55d427c69d4caf65d469fe 349 Gene3D G3DSA:1.10.10.60 21 49 1.3E-5 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS04490 4e50d19690f97d81c53d356d8d4df9e2 930 Gene3D G3DSA:3.40.50.300 253 352 4.3E-17 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04490 4e50d19690f97d81c53d356d8d4df9e2 930 Gene3D G3DSA:3.40.50.300 427 474 4.3E-17 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04490 4e50d19690f97d81c53d356d8d4df9e2 930 Pfam PF00929 Exonuclease 12 164 6.4E-28 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LS838_RS04490 4e50d19690f97d81c53d356d8d4df9e2 930 SMART SM00479 9 176 1.2E-33 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LS838_RS04490 4e50d19690f97d81c53d356d8d4df9e2 930 SUPERFAMILY SSF53098 10 205 3.13E-48 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS04490 4e50d19690f97d81c53d356d8d4df9e2 930 TIGRFAM TIGR01407 dinG_rel: putative DnaQ family exonuclease/DinG family helicase 10 918 2.4E-200 T 09-03-2017 IPR006310 DnaQ exonuclease/DinG helicase, predicted LS838_RS04490 4e50d19690f97d81c53d356d8d4df9e2 930 SUPERFAMILY SSF52540 278 328 4.43E-22 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04490 4e50d19690f97d81c53d356d8d4df9e2 930 SUPERFAMILY SSF52540 414 482 4.43E-22 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04490 4e50d19690f97d81c53d356d8d4df9e2 930 SUPERFAMILY SSF52540 675 689 4.43E-22 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04490 4e50d19690f97d81c53d356d8d4df9e2 930 SUPERFAMILY SSF52540 720 890 4.43E-22 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04490 4e50d19690f97d81c53d356d8d4df9e2 930 Pfam PF13307 Helicase C-terminal domain 753 908 1.3E-26 T 09-03-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 LS838_RS04490 4e50d19690f97d81c53d356d8d4df9e2 930 Pfam PF04851 Type III restriction enzyme, res subunit 257 475 2.8E-8 T 09-03-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 LS838_RS04490 4e50d19690f97d81c53d356d8d4df9e2 930 Gene3D G3DSA:3.30.420.10 5 182 6.5E-48 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS04490 4e50d19690f97d81c53d356d8d4df9e2 930 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 8 177 2.6E-24 T 09-03-2017 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS04490 4e50d19690f97d81c53d356d8d4df9e2 930 SMART SM00487 255 538 0.0019 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LS838_RS04490 4e50d19690f97d81c53d356d8d4df9e2 930 SMART SM00491 763 896 8.0E-15 T 09-03-2017 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 LS838_RS06790 8ea5f84a9d1a54e7f3d243aa546d3005 145 Gene3D G3DSA:3.30.428.10 9 145 4.9E-38 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 LS838_RS06790 8ea5f84a9d1a54e7f3d243aa546d3005 145 Pfam PF01230 HIT domain 17 112 1.6E-20 T 09-03-2017 IPR001310 Histidine triad (HIT) protein LS838_RS06790 8ea5f84a9d1a54e7f3d243aa546d3005 145 SUPERFAMILY SSF54197 7 144 1.32E-40 T 09-03-2017 IPR011146 HIT-like domain GO:0003824 LS838_RS06790 8ea5f84a9d1a54e7f3d243aa546d3005 145 PRINTS PR00332 Histidine triad family signature 11 27 3.9E-14 T 09-03-2017 IPR001310 Histidine triad (HIT) protein LS838_RS06790 8ea5f84a9d1a54e7f3d243aa546d3005 145 PRINTS PR00332 Histidine triad family signature 32 50 3.9E-14 T 09-03-2017 IPR001310 Histidine triad (HIT) protein LS838_RS06790 8ea5f84a9d1a54e7f3d243aa546d3005 145 PRINTS PR00332 Histidine triad family signature 100 110 3.9E-14 T 09-03-2017 IPR001310 Histidine triad (HIT) protein LS838_RS06790 8ea5f84a9d1a54e7f3d243aa546d3005 145 ProSitePatterns PS00892 HIT domain signature. 93 111 - T 09-03-2017 IPR019808 Histidine triad, conserved site LS838_RS05415 5f853a4228a3645df9b7dc9460c4e56f 412 SUPERFAMILY SSF53187 324 406 1.94E-66 T 09-03-2017 LS838_RS05415 5f853a4228a3645df9b7dc9460c4e56f 412 SUPERFAMILY SSF53187 5 213 1.94E-66 T 09-03-2017 LS838_RS05415 5f853a4228a3645df9b7dc9460c4e56f 412 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 410 5.6E-213 T 09-03-2017 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 LS838_RS05415 5f853a4228a3645df9b7dc9460c4e56f 412 PIRSF PIRSF037215 1 411 1.4E-176 T 09-03-2017 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 LS838_RS05415 5f853a4228a3645df9b7dc9460c4e56f 412 SUPERFAMILY SSF55031 212 322 5.13E-39 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain LS838_RS05415 5f853a4228a3645df9b7dc9460c4e56f 412 Pfam PF07687 Peptidase dimerisation domain 210 309 3.4E-8 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain LS838_RS05415 5f853a4228a3645df9b7dc9460c4e56f 412 Gene3D G3DSA:3.30.70.360 213 321 5.2E-42 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain LS838_RS05415 5f853a4228a3645df9b7dc9460c4e56f 412 Gene3D G3DSA:3.40.630.10 324 408 3.8E-103 T 09-03-2017 LS838_RS05415 5f853a4228a3645df9b7dc9460c4e56f 412 Gene3D G3DSA:3.40.630.10 3 212 3.8E-103 T 09-03-2017 LS838_RS05415 5f853a4228a3645df9b7dc9460c4e56f 412 Pfam PF01546 Peptidase family M20/M25/M40 143 404 4.4E-9 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LS838_RS08720 7735f397b394d97b1ce9e1216036ee21 52 SUPERFAMILY SSF46955 4 49 1.37E-12 T 09-03-2017 IPR009061 Putative DNA-binding domain LS838_RS08720 7735f397b394d97b1ce9e1216036ee21 52 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 4 49 2.4E-7 T 09-03-2017 IPR010093 SinI-like, DNA-binding domain GO:0003677 LS838_RS08720 7735f397b394d97b1ce9e1216036ee21 52 Gene3D G3DSA:1.10.1660.10 1 50 4.6E-14 T 09-03-2017 LS838_RS08720 7735f397b394d97b1ce9e1216036ee21 52 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS08720 7735f397b394d97b1ce9e1216036ee21 52 SMART SM00422 5 52 0.004 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS08720 7735f397b394d97b1ce9e1216036ee21 52 Pfam PF00376 MerR family regulatory protein 6 42 1.5E-13 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 811 876 1.2E-20 T 09-03-2017 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 SUPERFAMILY SSF52374 2 194 1.71E-143 T 09-03-2017 LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 SUPERFAMILY SSF52374 342 571 1.71E-143 T 09-03-2017 LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 Gene3D G3DSA:1.10.287.380 804 873 1.1E-11 T 09-03-2017 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 SUPERFAMILY SSF46589 811 875 3.66E-16 T 09-03-2017 IPR010978 tRNA-binding arm GO:0000166 LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 Gene3D G3DSA:3.40.50.620 7 195 1.1E-142 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 Gene3D G3DSA:3.40.50.620 342 560 1.1E-142 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 SUPERFAMILY SSF47323 572 825 5.61E-66 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 PRINTS PR00986 Valyl-tRNA synthetase signature 441 462 1.8E-35 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 PRINTS PR00986 Valyl-tRNA synthetase signature 347 360 1.8E-35 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 PRINTS PR00986 Valyl-tRNA synthetase signature 473 491 1.8E-35 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 PRINTS PR00986 Valyl-tRNA synthetase signature 38 49 1.8E-35 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 PRINTS PR00986 Valyl-tRNA synthetase signature 232 249 1.8E-35 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 SUPERFAMILY SSF50677 193 343 1.57E-62 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 Pfam PF08264 Anticodon-binding domain of tRNA 605 752 3.0E-42 T 09-03-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 Gene3D G3DSA:1.10.730.10 561 742 4.5E-59 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 Hamap MF_02004 Valine--tRNA ligase [valS]. 4 876 15.948 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 17 561 5.1E-222 T 09-03-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 TIGRFAM TIGR00422 valS: valine--tRNA ligase 6 858 0.0 T 09-03-2017 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 Gene3D G3DSA:3.90.740.10 196 337 1.1E-50 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 LS838_RS03310 344f30acd6cd3c42df670472b445f392 879 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 56 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS07250 a72332260d58bd7201865d8a9421d90b 171 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 11 153 44.393 T 09-03-2017 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 LS838_RS07250 a72332260d58bd7201865d8a9421d90b 171 Pfam PF14437 MafB19-like deaminase 6 153 1.6E-39 T 09-03-2017 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 LS838_RS07250 a72332260d58bd7201865d8a9421d90b 171 Gene3D G3DSA:3.40.140.10 3 151 9.6E-58 T 09-03-2017 LS838_RS07250 a72332260d58bd7201865d8a9421d90b 171 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 94 - T 09-03-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 LS838_RS07250 a72332260d58bd7201865d8a9421d90b 171 SUPERFAMILY SSF53927 7 157 1.67E-52 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 SMART SM01086 717 806 9.4E-33 T 09-03-2017 IPR019489 Clp ATPase, C-terminal LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 SMART SM00382 541 718 9.0E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 SMART SM00382 204 348 1.4E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 Pfam PF07724 AAA domain (Cdc48 subfamily) 540 710 4.3E-48 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 SUPERFAMILY SSF81923 4 141 3.01E-19 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 Gene3D G3DSA:3.40.50.300 167 346 1.1E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 590 608 7.0E-39 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 619 637 7.0E-39 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 652 666 7.0E-39 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 545 563 7.0E-39 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 575 593 - T 09-03-2017 IPR028299 ClpA/B, conserved site 2 LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 Gene3D G3DSA:1.10.8.60 349 430 2.7E-26 T 09-03-2017 LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 67 1.3E-12 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 Gene3D G3DSA:1.10.1780.10 1 140 3.5E-28 T 09-03-2017 IPR004176 Clp, N-terminal GO:0019538 LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 717 797 2.8E-24 T 09-03-2017 IPR019489 Clp ATPase, C-terminal LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 SUPERFAMILY SSF52540 165 427 9.85E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 Gene3D G3DSA:1.10.8.60 729 812 5.6E-29 T 09-03-2017 LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 209 321 1.3E-14 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 SUPERFAMILY SSF52540 490 796 1.1E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 Gene3D G3DSA:3.40.50.300 700 728 7.2E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01785 ecdeb0130d57a1da0c85ae331f84076b 819 Gene3D G3DSA:3.40.50.300 496 667 7.2E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03635 4014100ae05cae2efff02a7e29b5d26a 465 Gene3D G3DSA:3.90.700.10 255 394 4.1E-41 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS03635 4014100ae05cae2efff02a7e29b5d26a 465 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 19 454 2.5E-149 T 09-03-2017 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 LS838_RS03635 4014100ae05cae2efff02a7e29b5d26a 465 Pfam PF00890 FAD binding domain 19 443 9.6E-93 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS03635 4014100ae05cae2efff02a7e29b5d26a 465 SUPERFAMILY SSF51905 402 463 3.99E-62 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS03635 4014100ae05cae2efff02a7e29b5d26a 465 SUPERFAMILY SSF51905 13 274 3.99E-62 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS03635 4014100ae05cae2efff02a7e29b5d26a 465 Gene3D G3DSA:3.50.50.60 16 249 3.3E-99 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS03635 4014100ae05cae2efff02a7e29b5d26a 465 Gene3D G3DSA:3.50.50.60 399 460 3.3E-99 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS03635 4014100ae05cae2efff02a7e29b5d26a 465 SUPERFAMILY SSF56425 250 398 2.84E-44 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS06875 ec353ad2b5221de797fe58c3fd8619f3 924 SUPERFAMILY SSF51445 706 833 1.5E-20 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS06875 ec353ad2b5221de797fe58c3fd8619f3 924 Gene3D G3DSA:2.60.40.1180 569 639 2.7E-4 T 09-03-2017 IPR013780 Glycosyl hydrolase, all-beta LS838_RS06875 ec353ad2b5221de797fe58c3fd8619f3 924 Gene3D G3DSA:3.20.20.80 706 792 6.6E-16 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS06875 ec353ad2b5221de797fe58c3fd8619f3 924 Gene3D G3DSA:3.20.20.80 834 856 6.6E-16 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS06875 ec353ad2b5221de797fe58c3fd8619f3 924 Gene3D G3DSA:3.20.20.80 262 532 1.1E-25 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS06875 ec353ad2b5221de797fe58c3fd8619f3 924 Pfam PF02324 Glycosyl hydrolase family 70 131 918 2.3E-185 T 09-03-2017 IPR003318 Glycoside hydrolase, family 70, catalytic domain GO:0009250|GO:0046527 KEGG: 00500+2.4.1.5 LS838_RS06875 ec353ad2b5221de797fe58c3fd8619f3 924 SUPERFAMILY SSF51445 254 443 3.04E-28 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS06875 ec353ad2b5221de797fe58c3fd8619f3 924 SUPERFAMILY SSF51445 481 528 3.04E-28 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS03305 b76415bdd363ae41d2690286921d6415 241 SUPERFAMILY SSF55174 2 58 6.48E-15 T 09-03-2017 LS838_RS03305 b76415bdd363ae41d2690286921d6415 241 Pfam PF00849 RNA pseudouridylate synthase 61 198 6.4E-25 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS03305 b76415bdd363ae41d2690286921d6415 241 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 09-03-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 LS838_RS03305 b76415bdd363ae41d2690286921d6415 241 Pfam PF01479 S4 domain 3 48 8.6E-14 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS03305 b76415bdd363ae41d2690286921d6415 241 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 230 3.1E-49 T 09-03-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 LS838_RS03305 b76415bdd363ae41d2690286921d6415 241 SUPERFAMILY SSF55120 46 238 1.3E-45 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS03305 b76415bdd363ae41d2690286921d6415 241 Gene3D G3DSA:3.10.290.10 2 64 6.1E-22 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS03305 b76415bdd363ae41d2690286921d6415 241 SMART SM00363 2 61 4.5E-14 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS06760 72e5757593487c754e560ef5072b6a37 439 SUPERFAMILY SSF53244 300 435 3.48E-36 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LS838_RS06760 72e5757593487c754e560ef5072b6a37 439 Gene3D G3DSA:3.40.50.720 2 92 1.1E-26 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS06760 72e5757593487c754e560ef5072b6a37 439 Pfam PF08245 Mur ligase middle domain 111 281 3.1E-24 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LS838_RS06760 72e5757593487c754e560ef5072b6a37 439 Pfam PF01225 Mur ligase family, catalytic domain 8 106 4.4E-20 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 LS838_RS06760 72e5757593487c754e560ef5072b6a37 439 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 429 3.2E-122 T 09-03-2017 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS06760 72e5757593487c754e560ef5072b6a37 439 Gene3D G3DSA:3.90.190.20 303 437 1.4E-39 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LS838_RS06760 72e5757593487c754e560ef5072b6a37 439 SUPERFAMILY SSF53623 97 298 1.18E-55 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LS838_RS06760 72e5757593487c754e560ef5072b6a37 439 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 439 32.601 T 09-03-2017 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS06760 72e5757593487c754e560ef5072b6a37 439 Pfam PF02875 Mur ligase family, glutamate ligase domain 303 383 1.0E-18 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LS838_RS06760 72e5757593487c754e560ef5072b6a37 439 Gene3D G3DSA:3.40.1190.10 95 302 6.2E-59 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LS838_RS06760 72e5757593487c754e560ef5072b6a37 439 SUPERFAMILY SSF51984 6 92 1.04E-18 T 09-03-2017 LS838_RS09420 446d3678a5b1f61bf30e4e3c8de6bd9a 219 SUPERFAMILY SSF46955 4 51 1.05E-11 T 09-03-2017 IPR009061 Putative DNA-binding domain LS838_RS09420 446d3678a5b1f61bf30e4e3c8de6bd9a 219 Gene3D G3DSA:1.10.1660.10 2 50 1.2E-12 T 09-03-2017 LS838_RS09420 446d3678a5b1f61bf30e4e3c8de6bd9a 219 Pfam PF00376 MerR family regulatory protein 6 42 3.3E-12 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS09420 446d3678a5b1f61bf30e4e3c8de6bd9a 219 Pfam PF00239 Resolvase, N terminal domain 66 195 2.0E-20 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS09420 446d3678a5b1f61bf30e4e3c8de6bd9a 219 SUPERFAMILY SSF53041 65 198 6.8E-22 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS09420 446d3678a5b1f61bf30e4e3c8de6bd9a 219 SMART SM00422 5 67 2.3E-7 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS09420 446d3678a5b1f61bf30e4e3c8de6bd9a 219 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS09420 446d3678a5b1f61bf30e4e3c8de6bd9a 219 ProSitePatterns PS00397 Site-specific recombinases active site. 68 76 - T 09-03-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 LS838_RS09420 446d3678a5b1f61bf30e4e3c8de6bd9a 219 SMART SM00857 65 205 4.4E-22 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS09420 446d3678a5b1f61bf30e4e3c8de6bd9a 219 Gene3D G3DSA:3.40.50.1390 65 184 3.1E-18 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS07305 97f654a80693a1ae8257d5f807b4b69b 372 Pfam PF00144 Beta-lactamase 46 355 1.1E-30 T 09-03-2017 IPR001466 Beta-lactamase-related LS838_RS07305 97f654a80693a1ae8257d5f807b4b69b 372 Gene3D G3DSA:3.40.710.10 35 363 4.5E-51 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS07305 97f654a80693a1ae8257d5f807b4b69b 372 SUPERFAMILY SSF56601 39 353 8.03E-55 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS04105 03a4e849259c804bc28e34f96f151821 240 SUPERFAMILY SSF51735 4 240 6.25E-83 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS04105 03a4e849259c804bc28e34f96f151821 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.2E-45 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS04105 03a4e849259c804bc28e34f96f151821 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.2E-45 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS04105 03a4e849259c804bc28e34f96f151821 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.2E-45 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS04105 03a4e849259c804bc28e34f96f151821 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 2.2E-45 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS04105 03a4e849259c804bc28e34f96f151821 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.2E-45 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS04105 03a4e849259c804bc28e34f96f151821 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.2E-45 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS04105 03a4e849259c804bc28e34f96f151821 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LS838_RS04105 03a4e849259c804bc28e34f96f151821 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 239 1.4E-62 T 09-03-2017 LS838_RS04105 03a4e849259c804bc28e34f96f151821 240 Gene3D G3DSA:3.40.50.720 1 239 1.4E-85 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS04105 03a4e849259c804bc28e34f96f151821 240 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 2.8E-6 T 09-03-2017 LS838_RS04105 03a4e849259c804bc28e34f96f151821 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 6.3E-15 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS04105 03a4e849259c804bc28e34f96f151821 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 6.3E-15 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS04105 03a4e849259c804bc28e34f96f151821 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 6.3E-15 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS08430 37c118f4e30df326b01f4053174b4273 304 Gene3D G3DSA:3.40.50.1820 8 295 6.9E-52 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS08430 37c118f4e30df326b01f4053174b4273 304 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 58 69 9.0E-11 T 09-03-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LS838_RS08430 37c118f4e30df326b01f4053174b4273 304 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 28 36 9.0E-11 T 09-03-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LS838_RS08430 37c118f4e30df326b01f4053174b4273 304 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 107 121 9.0E-11 T 09-03-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LS838_RS08430 37c118f4e30df326b01f4053174b4273 304 Pfam PF00561 alpha/beta hydrolase fold 27 279 1.5E-18 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 LS838_RS08430 37c118f4e30df326b01f4053174b4273 304 PIRSF PIRSF005539 1 302 5.9E-100 T 09-03-2017 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LS838_RS08430 37c118f4e30df326b01f4053174b4273 304 TIGRFAM TIGR01250 pro_imino_pep_2: proline-specific peptidase 3 294 1.1E-123 T 09-03-2017 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LS838_RS08430 37c118f4e30df326b01f4053174b4273 304 SUPERFAMILY SSF53474 9 294 8.11E-54 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS00170 b0a96a9207bf9417144c8db57f9b5d7a 921 Pfam PF11907 Domain of unknown function (DUF3427) 647 918 4.8E-61 T 09-03-2017 IPR021835 Protein of unknown function DUF3427 LS838_RS00170 b0a96a9207bf9417144c8db57f9b5d7a 921 SUPERFAMILY SSF56024 16 160 1.05E-11 T 09-03-2017 LS838_RS00170 b0a96a9207bf9417144c8db57f9b5d7a 921 SMART SM00490 428 509 5.2E-8 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS00170 b0a96a9207bf9417144c8db57f9b5d7a 921 Pfam PF04851 Type III restriction enzyme, res subunit 186 336 2.8E-30 T 09-03-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 LS838_RS00170 b0a96a9207bf9417144c8db57f9b5d7a 921 Gene3D G3DSA:3.40.50.300 395 545 1.7E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00170 b0a96a9207bf9417144c8db57f9b5d7a 921 SMART SM00487 184 371 1.0E-13 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LS838_RS00170 b0a96a9207bf9417144c8db57f9b5d7a 921 Gene3D G3DSA:3.30.870.10 16 159 3.5E-7 T 09-03-2017 LS838_RS00170 b0a96a9207bf9417144c8db57f9b5d7a 921 Pfam PF13091 PLD-like domain 51 137 3.6E-10 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 LS838_RS00170 b0a96a9207bf9417144c8db57f9b5d7a 921 Gene3D G3DSA:3.40.50.300 184 345 8.9E-24 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00170 b0a96a9207bf9417144c8db57f9b5d7a 921 Pfam PF00271 Helicase conserved C-terminal domain 415 508 1.2E-9 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS00170 b0a96a9207bf9417144c8db57f9b5d7a 921 SUPERFAMILY SSF52540 234 529 7.31E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02040 b74b39db854dea24f47216841b76ad88 393 Pfam PF00155 Aminotransferase class I and II 32 381 1.2E-64 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LS838_RS02040 b74b39db854dea24f47216841b76ad88 393 Gene3D G3DSA:3.90.1150.10 255 387 1.5E-39 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LS838_RS02040 b74b39db854dea24f47216841b76ad88 393 Gene3D G3DSA:3.40.640.10 45 254 6.9E-62 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LS838_RS02040 b74b39db854dea24f47216841b76ad88 393 SUPERFAMILY SSF53383 11 387 7.8E-102 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase LS838_RS02040 b74b39db854dea24f47216841b76ad88 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 233 246 - T 09-03-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 LS838_RS02655 95a1b15fcd736c30654879c26cc58c1d 286 Pfam PF06054 Competence protein CoiA-like family 29 156 1.0E-14 T 09-03-2017 IPR010330 Competence-induced protein CoiA-like LS838_RS02725 5600eae77025fa14f9b7170163d840e4 407 SUPERFAMILY SSF63411 98 208 3.17E-10 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LS838_RS02725 5600eae77025fa14f9b7170163d840e4 407 SUPERFAMILY SSF63411 239 405 1.91E-20 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LS838_RS02725 5600eae77025fa14f9b7170163d840e4 407 Gene3D G3DSA:3.30.830.10 243 405 4.2E-18 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 LS838_RS02725 5600eae77025fa14f9b7170163d840e4 407 Pfam PF05193 Peptidase M16 inactive domain 232 347 5.3E-11 T 09-03-2017 IPR007863 Peptidase M16, C-terminal LS838_RS02725 5600eae77025fa14f9b7170163d840e4 407 Gene3D G3DSA:3.30.830.10 6 209 1.3E-14 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 LS838_RS00640 ac1927da38fd5a6a72b4c4751f14a0e9 310 SUPERFAMILY SSF51735 129 308 2.96E-31 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS00640 ac1927da38fd5a6a72b4c4751f14a0e9 310 SUPERFAMILY SSF53223 24 128 2.3E-32 T 09-03-2017 LS838_RS00640 ac1927da38fd5a6a72b4c4751f14a0e9 310 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 29 309 30.035 T 09-03-2017 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 LS838_RS00640 ac1927da38fd5a6a72b4c4751f14a0e9 310 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 34 116 9.1E-29 T 09-03-2017 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 LS838_RS00640 ac1927da38fd5a6a72b4c4751f14a0e9 310 Gene3D G3DSA:3.40.192.10 26 134 2.0E-39 T 09-03-2017 LS838_RS00640 ac1927da38fd5a6a72b4c4751f14a0e9 310 Gene3D G3DSA:3.40.50.720 135 309 1.5E-38 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS01655 a0f775bd7a3e4c8ec6d9a16d52f1f80d 137 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 90 1.3E-16 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 LS838_RS01655 a0f775bd7a3e4c8ec6d9a16d52f1f80d 137 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 117 2.0E-28 T 09-03-2017 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LS838_RS01655 a0f775bd7a3e4c8ec6d9a16d52f1f80d 137 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 116 1.3E-23 T 09-03-2017 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LS838_RS01655 a0f775bd7a3e4c8ec6d9a16d52f1f80d 137 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 117 21.456 T 09-03-2017 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LS838_RS01655 a0f775bd7a3e4c8ec6d9a16d52f1f80d 137 Gene3D G3DSA:3.90.470.20 1 117 1.7E-32 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 LS838_RS01655 a0f775bd7a3e4c8ec6d9a16d52f1f80d 137 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 94 3.0E-26 T 09-03-2017 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 LS838_RS01655 a0f775bd7a3e4c8ec6d9a16d52f1f80d 137 SUPERFAMILY SSF56214 1 116 1.01E-28 T 09-03-2017 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 LS838_RS05570 fd391c86035b51118bac48c5f698c18e 372 PRINTS PR00046 Major sigma-70 factor signature 187 195 2.4E-31 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05570 fd391c86035b51118bac48c5f698c18e 372 PRINTS PR00046 Major sigma-70 factor signature 332 347 2.4E-31 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05570 fd391c86035b51118bac48c5f698c18e 372 PRINTS PR00046 Major sigma-70 factor signature 311 323 2.4E-31 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05570 fd391c86035b51118bac48c5f698c18e 372 PRINTS PR00046 Major sigma-70 factor signature 347 358 2.4E-31 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05570 fd391c86035b51118bac48c5f698c18e 372 PRINTS PR00046 Major sigma-70 factor signature 163 176 2.4E-31 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05570 fd391c86035b51118bac48c5f698c18e 372 Gene3D G3DSA:1.10.10.10 212 263 3.6E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS05570 fd391c86035b51118bac48c5f698c18e 372 SUPERFAMILY SSF88659 269 370 3.74E-30 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05570 fd391c86035b51118bac48c5f698c18e 372 Pfam PF04539 Sigma-70 region 3 218 294 1.2E-29 T 09-03-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05570 fd391c86035b51118bac48c5f698c18e 372 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 332 358 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05570 fd391c86035b51118bac48c5f698c18e 372 Gene3D G3DSA:1.10.601.10 30 208 5.6E-76 T 09-03-2017 LS838_RS05570 fd391c86035b51118bac48c5f698c18e 372 SUPERFAMILY SSF88946 100 209 2.62E-55 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05570 fd391c86035b51118bac48c5f698c18e 372 Pfam PF00140 Sigma-70 factor, region 1.2 101 134 7.7E-19 T 09-03-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05570 fd391c86035b51118bac48c5f698c18e 372 SUPERFAMILY SSF88659 212 285 2.62E-21 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05570 fd391c86035b51118bac48c5f698c18e 372 Pfam PF04545 Sigma-70, region 4 307 360 3.4E-19 T 09-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05570 fd391c86035b51118bac48c5f698c18e 372 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 135 371 7.9E-124 T 09-03-2017 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 LS838_RS05570 fd391c86035b51118bac48c5f698c18e 372 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 2 372 33.813 T 09-03-2017 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 LS838_RS05570 fd391c86035b51118bac48c5f698c18e 372 Gene3D G3DSA:1.10.10.10 301 372 1.2E-33 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS05570 fd391c86035b51118bac48c5f698c18e 372 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 135 360 1.4E-42 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05570 fd391c86035b51118bac48c5f698c18e 372 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 163 176 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05570 fd391c86035b51118bac48c5f698c18e 372 Pfam PF04542 Sigma-70 region 2 139 208 2.0E-21 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05910 2332afdc3f1ffd5035aeb42d82b8b7bb 99 Pfam PF04296 Protein of unknown function (DUF448) 9 81 7.4E-23 T 09-03-2017 IPR007393 Domain of unknown function DUF448 LS838_RS05910 2332afdc3f1ffd5035aeb42d82b8b7bb 99 Gene3D G3DSA:3.30.1230.10 2 93 2.3E-30 T 09-03-2017 IPR007393 Domain of unknown function DUF448 LS838_RS05910 2332afdc3f1ffd5035aeb42d82b8b7bb 99 SUPERFAMILY SSF64376 4 94 2.35E-28 T 09-03-2017 IPR007393 Domain of unknown function DUF448 LS838_RS03880 7297e3dc1b2bed47b117708a6cf20c0d 311 Gene3D G3DSA:1.10.10.10 8 83 9.2E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS03880 7297e3dc1b2bed47b117708a6cf20c0d 311 SUPERFAMILY SSF53850 92 284 5.25E-13 T 09-03-2017 LS838_RS03880 7297e3dc1b2bed47b117708a6cf20c0d 311 Pfam PF03466 LysR substrate binding domain 89 262 2.3E-11 T 09-03-2017 IPR005119 LysR, substrate-binding LS838_RS03880 7297e3dc1b2bed47b117708a6cf20c0d 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 2.0E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS03880 7297e3dc1b2bed47b117708a6cf20c0d 311 Gene3D G3DSA:3.40.190.10 84 203 2.9E-5 T 09-03-2017 LS838_RS03880 7297e3dc1b2bed47b117708a6cf20c0d 311 Gene3D G3DSA:3.40.190.10 204 262 5.0E-8 T 09-03-2017 LS838_RS03880 7297e3dc1b2bed47b117708a6cf20c0d 311 SUPERFAMILY SSF46785 7 102 4.09E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS07575 8eaa73ca9d8f58c5d578549e7a2dc082 275 Pfam PF02361 Cobalt transport protein 12 231 9.7E-28 T 09-03-2017 IPR003339 ABC/ECF transporter, transmembrane component LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 Pfam PF00702 haloacid dehalogenase-like hydrolase 299 503 4.0E-31 T 09-03-2017 LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 82 568 2.3E-73 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 304 310 - T 09-03-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 SUPERFAMILY SSF81665 211 296 1.12E-10 T 09-03-2017 LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 SUPERFAMILY SSF81665 63 114 1.12E-10 T 09-03-2017 LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 60 590 8.7E-140 T 09-03-2017 LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 SUPERFAMILY SSF81653 113 210 9.55E-25 T 09-03-2017 LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 SUPERFAMILY SSF56784 357 587 6.0E-45 T 09-03-2017 IPR023214 HAD-like domain LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 SUPERFAMILY SSF56784 300 320 6.0E-45 T 09-03-2017 IPR023214 HAD-like domain LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 60 590 2.0E-153 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 Pfam PF00122 E1-E2 ATPase 81 293 1.6E-59 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 302 316 4.1E-28 T 09-03-2017 LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 436 446 4.1E-28 T 09-03-2017 LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 413 424 4.1E-28 T 09-03-2017 LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 513 525 4.1E-28 T 09-03-2017 LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 160 174 4.1E-28 T 09-03-2017 LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 489 508 4.1E-28 T 09-03-2017 LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 489 505 2.7E-7 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 461 477 2.7E-7 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 521 546 2.7E-7 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 Gene3D G3DSA:3.40.50.1000 421 536 1.7E-38 T 09-03-2017 IPR023214 HAD-like domain LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 Gene3D G3DSA:3.40.50.1000 286 316 1.7E-38 T 09-03-2017 IPR023214 HAD-like domain LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 Gene3D G3DSA:2.70.150.10 63 211 2.8E-28 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LS838_RS09610 f5b295f4e15bff5863371f4999021104 604 Gene3D G3DSA:3.40.1110.10 317 420 5.4E-7 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 LS838_RS00330 03c8a2f468dc3193547f8c412f387be3 294 Gene3D G3DSA:1.10.3470.10 24 293 2.8E-49 T 09-03-2017 IPR029022 ABC transporter, BtuC-like LS838_RS00330 03c8a2f468dc3193547f8c412f387be3 294 Pfam PF01032 FecCD transport family 21 290 2.8E-48 T 09-03-2017 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 LS838_RS00330 03c8a2f468dc3193547f8c412f387be3 294 SUPERFAMILY SSF81345 10 290 5.75E-41 T 09-03-2017 IPR029022 ABC transporter, BtuC-like LS838_RS03835 0f7f4d27ff74a66f96fd15d0d6454a33 239 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 101 115 - T 09-03-2017 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 LS838_RS03835 0f7f4d27ff74a66f96fd15d0d6454a33 239 SUPERFAMILY SSF55174 3 69 2.16E-14 T 09-03-2017 LS838_RS03835 0f7f4d27ff74a66f96fd15d0d6454a33 239 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 68 228 3.4E-46 T 09-03-2017 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 LS838_RS03835 0f7f4d27ff74a66f96fd15d0d6454a33 239 SMART SM00363 4 62 8.7E-12 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS03835 0f7f4d27ff74a66f96fd15d0d6454a33 239 SUPERFAMILY SSF55120 50 237 4.6E-41 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS03835 0f7f4d27ff74a66f96fd15d0d6454a33 239 Gene3D G3DSA:3.10.290.10 3 66 2.6E-24 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS03835 0f7f4d27ff74a66f96fd15d0d6454a33 239 Pfam PF00849 RNA pseudouridylate synthase 64 197 2.7E-21 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS03835 0f7f4d27ff74a66f96fd15d0d6454a33 239 Pfam PF01479 S4 domain 4 45 6.2E-15 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS03715 cbe51ff00a004dbe53bad33d67a33fe5 440 PIRSF PIRSF002401 4 388 5.0E-132 T 09-03-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 LS838_RS03715 cbe51ff00a004dbe53bad33d67a33fe5 440 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 232 250 1.9E-33 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS03715 cbe51ff00a004dbe53bad33d67a33fe5 440 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 166 186 1.9E-33 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS03715 cbe51ff00a004dbe53bad33d67a33fe5 440 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 187 205 1.9E-33 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS03715 cbe51ff00a004dbe53bad33d67a33fe5 440 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 215 230 1.9E-33 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS03715 cbe51ff00a004dbe53bad33d67a33fe5 440 Pfam PF01018 GTP1/OBG 7 162 2.1E-59 T 09-03-2017 IPR006169 GTP1/OBG domain GO:0005525 LS838_RS03715 cbe51ff00a004dbe53bad33d67a33fe5 440 SUPERFAMILY SSF82051 7 162 6.28E-55 T 09-03-2017 IPR006169 GTP1/OBG domain GO:0005525 LS838_RS03715 cbe51ff00a004dbe53bad33d67a33fe5 440 Hamap MF_01454 GTPase Obg [obg]. 6 338 45.555 T 09-03-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 LS838_RS03715 cbe51ff00a004dbe53bad33d67a33fe5 440 Pfam PF09269 Domain of unknown function (DUF1967) 370 438 1.6E-24 T 09-03-2017 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 LS838_RS03715 cbe51ff00a004dbe53bad33d67a33fe5 440 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 7 336 2.1E-133 T 09-03-2017 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 LS838_RS03715 cbe51ff00a004dbe53bad33d67a33fe5 440 SUPERFAMILY SSF52540 155 341 1.92E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03715 cbe51ff00a004dbe53bad33d67a33fe5 440 Gene3D G3DSA:3.40.50.300 164 349 3.3E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03715 cbe51ff00a004dbe53bad33d67a33fe5 440 Pfam PF01926 50S ribosome-binding GTPase 165 286 2.5E-20 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS03715 cbe51ff00a004dbe53bad33d67a33fe5 440 SUPERFAMILY SSF102741 368 439 1.83E-21 T 09-03-2017 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 LS838_RS03715 cbe51ff00a004dbe53bad33d67a33fe5 440 Gene3D G3DSA:2.70.210.12 6 160 1.6E-56 T 09-03-2017 IPR006169 GTP1/OBG domain GO:0005525 LS838_RS03715 cbe51ff00a004dbe53bad33d67a33fe5 440 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 370 439 5.3E-25 T 09-03-2017 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 LS838_RS03715 cbe51ff00a004dbe53bad33d67a33fe5 440 ProSitePatterns PS00905 GTP1/OBG family signature. 217 230 - T 09-03-2017 IPR006074 GTP1/OBG, conserved site GO:0005525 LS838_RS08615 63c587bdbe932f16bca0164b792735f2 371 Pfam PF03275 UDP-galactopyranose mutase 146 351 1.2E-87 T 09-03-2017 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 LS838_RS08615 63c587bdbe932f16bca0164b792735f2 371 Pfam PF13450 NAD(P)-binding Rossmann-like domain 6 72 3.4E-20 T 09-03-2017 LS838_RS08615 63c587bdbe932f16bca0164b792735f2 371 Gene3D G3DSA:3.40.50.720 181 256 6.2E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS08615 63c587bdbe932f16bca0164b792735f2 371 Gene3D G3DSA:3.40.50.720 4 78 6.2E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS08615 63c587bdbe932f16bca0164b792735f2 371 Gene3D G3DSA:3.40.50.720 325 368 6.2E-45 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS08615 63c587bdbe932f16bca0164b792735f2 371 SUPERFAMILY SSF54373 247 317 1.29E-25 T 09-03-2017 LS838_RS08615 63c587bdbe932f16bca0164b792735f2 371 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 2 367 5.9E-132 T 09-03-2017 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 LS838_RS08615 63c587bdbe932f16bca0164b792735f2 371 SUPERFAMILY SSF51971 3 265 1.47E-55 T 09-03-2017 LS838_RS08615 63c587bdbe932f16bca0164b792735f2 371 SUPERFAMILY SSF51971 336 366 1.47E-55 T 09-03-2017 LS838_RS01705 06e296655073cc7c2df80ed0366aa32b 293 Gene3D G3DSA:3.90.1280.10 234 288 3.0E-22 T 09-03-2017 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 LS838_RS01705 06e296655073cc7c2df80ed0366aa32b 293 SUPERFAMILY SSF118352 232 288 3.4E-18 T 09-03-2017 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 LS838_RS01705 06e296655073cc7c2df80ed0366aa32b 293 Hamap MF_00117 33 kDa chaperonin [hslO]. 2 290 35.152 T 09-03-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 LS838_RS01705 06e296655073cc7c2df80ed0366aa32b 293 Pfam PF01430 Hsp33 protein 3 279 4.0E-83 T 09-03-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 LS838_RS01705 06e296655073cc7c2df80ed0366aa32b 293 PIRSF PIRSF005261 1 290 7.2E-69 T 09-03-2017 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 LS838_RS01705 06e296655073cc7c2df80ed0366aa32b 293 Gene3D G3DSA:3.55.30.10 2 233 4.3E-75 T 09-03-2017 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 LS838_RS01705 06e296655073cc7c2df80ed0366aa32b 293 SUPERFAMILY SSF64397 2 240 1.83E-68 T 09-03-2017 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 LS838_RS05615 d46e063fa33adbff8068f511244cb2d6 58 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 57 6.2E-23 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS05615 d46e063fa33adbff8068f511244cb2d6 58 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 23.448 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS05615 d46e063fa33adbff8068f511244cb2d6 58 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 56 6.0E-15 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS05615 d46e063fa33adbff8068f511244cb2d6 58 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.1E-13 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS05615 d46e063fa33adbff8068f511244cb2d6 58 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.1E-13 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS05615 d46e063fa33adbff8068f511244cb2d6 58 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.1E-13 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS05615 d46e063fa33adbff8068f511244cb2d6 58 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.1E-13 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS05615 d46e063fa33adbff8068f511244cb2d6 58 Pfam PF01165 Ribosomal protein S21 6 56 6.0E-22 T 09-03-2017 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS05615 d46e063fa33adbff8068f511244cb2d6 58 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 09-03-2017 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS02300 a48b42bdd6b38b464786b6df9524575c 149 Gene3D G3DSA:3.40.930.10 3 145 1.0E-42 T 09-03-2017 IPR002178 PTS EIIA type-2 domain LS838_RS02300 a48b42bdd6b38b464786b6df9524575c 149 SUPERFAMILY SSF55804 3 145 1.03E-39 T 09-03-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 LS838_RS02300 a48b42bdd6b38b464786b6df9524575c 149 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 46 62 - T 09-03-2017 IPR002178 PTS EIIA type-2 domain LS838_RS02300 a48b42bdd6b38b464786b6df9524575c 149 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 3 145 4.3E-35 T 09-03-2017 IPR002178 PTS EIIA type-2 domain LS838_RS02190 8d4b963b9bcd9618934118feebf2f956 451 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 378 409 - T 09-03-2017 IPR030390 RNA methyltransferase TrmA, active site LS838_RS02190 8d4b963b9bcd9618934118feebf2f956 451 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 430 440 - T 09-03-2017 IPR030391 RNA methyltransferase TrmA, conserved site LS838_RS02190 8d4b963b9bcd9618934118feebf2f956 451 Gene3D G3DSA:2.40.50.140 1 71 4.5E-26 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS02190 8d4b963b9bcd9618934118feebf2f956 451 Pfam PF01938 TRAM domain 4 56 8.7E-12 T 09-03-2017 IPR002792 TRAM domain LS838_RS02190 8d4b963b9bcd9618934118feebf2f956 451 Gene3D G3DSA:3.40.50.150 241 447 4.4E-70 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS02190 8d4b963b9bcd9618934118feebf2f956 451 SUPERFAMILY SSF50249 1 57 5.14E-16 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS02190 8d4b963b9bcd9618934118feebf2f956 451 SUPERFAMILY SSF53335 65 447 2.32E-78 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS02190 8d4b963b9bcd9618934118feebf2f956 451 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 86 447 7.9E-27 T 09-03-2017 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 LS838_RS02190 8d4b963b9bcd9618934118feebf2f956 451 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 14 440 1.6E-131 T 09-03-2017 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 LS838_RS00320 d6d1ed5fe1f40d6c014ba7a5219c7bc2 413 Pfam PF01385 Probable transposase 203 294 3.7E-16 T 09-03-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 LS838_RS00320 d6d1ed5fe1f40d6c014ba7a5219c7bc2 413 Pfam PF07282 Putative transposase DNA-binding domain 323 390 2.0E-16 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS00320 d6d1ed5fe1f40d6c014ba7a5219c7bc2 413 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 271 350 4.6E-9 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS05780 ac00a712853bc81638041317a3406ad9 195 SMART SM00014 79 186 3.8E-19 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LS838_RS05780 ac00a712853bc81638041317a3406ad9 195 Pfam PF01569 PAP2 superfamily 82 190 2.5E-16 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LS838_RS05780 ac00a712853bc81638041317a3406ad9 195 SUPERFAMILY SSF48317 12 190 3.92E-27 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LS838_RS05780 ac00a712853bc81638041317a3406ad9 195 Gene3D G3DSA:1.20.144.10 30 189 2.0E-22 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LS838_RS04820 26b636f3d1b6b4f7085848020dd642ad 297 Gene3D G3DSA:1.10.10.10 1 75 4.3E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS04820 26b636f3d1b6b4f7085848020dd642ad 297 SUPERFAMILY SSF46785 1 79 3.33E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS04820 26b636f3d1b6b4f7085848020dd642ad 297 Gene3D G3DSA:3.40.190.10 116 200 5.8E-4 T 09-03-2017 LS838_RS04820 26b636f3d1b6b4f7085848020dd642ad 297 SUPERFAMILY SSF53850 104 291 5.79E-6 T 09-03-2017 LS838_RS04820 26b636f3d1b6b4f7085848020dd642ad 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.6E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS04820 26b636f3d1b6b4f7085848020dd642ad 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.2E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS04820 26b636f3d1b6b4f7085848020dd642ad 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.2E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS04820 26b636f3d1b6b4f7085848020dd642ad 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.2E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS04820 26b636f3d1b6b4f7085848020dd642ad 297 Pfam PF03466 LysR substrate binding domain 116 293 3.8E-7 T 09-03-2017 IPR005119 LysR, substrate-binding LS838_RS05630 54f90971215895fdcd4d55d0959754b3 294 PIRSF PIRSF006483 4 294 6.9E-87 T 09-03-2017 IPR003740 Uncharacterised membrane protein YitT LS838_RS05630 54f90971215895fdcd4d55d0959754b3 294 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 231 286 3.5E-15 T 09-03-2017 IPR019264 Domain of unknown function DUF2179 LS838_RS05630 54f90971215895fdcd4d55d0959754b3 294 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 20 225 3.7E-58 T 09-03-2017 IPR003740 Uncharacterised membrane protein YitT LS838_RS01115 de6673e2678851c911fa9fcff769466e 649 PIRSF PIRSF001589 1 639 4.6E-158 T 09-03-2017 LS838_RS01115 de6673e2678851c911fa9fcff769466e 649 Gene3D G3DSA:3.60.20.10 1 220 1.0E-71 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LS838_RS01115 de6673e2678851c911fa9fcff769466e 649 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 555 6.3E-147 T 09-03-2017 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 LS838_RS01115 de6673e2678851c911fa9fcff769466e 649 SUPERFAMILY SSF52402 475 614 5.33E-64 T 09-03-2017 LS838_RS01115 de6673e2678851c911fa9fcff769466e 649 SUPERFAMILY SSF52402 229 373 5.33E-64 T 09-03-2017 LS838_RS01115 de6673e2678851c911fa9fcff769466e 649 Pfam PF00733 Asparagine synthase 238 618 5.5E-74 T 09-03-2017 IPR001962 Asparagine synthase GO:0004066|GO:0006529 LS838_RS01115 de6673e2678851c911fa9fcff769466e 649 SUPERFAMILY SSF56235 1 221 9.44E-61 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LS838_RS01115 de6673e2678851c911fa9fcff769466e 649 Gene3D G3DSA:3.40.50.620 221 369 1.7E-76 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS01115 de6673e2678851c911fa9fcff769466e 649 Gene3D G3DSA:3.40.50.620 471 619 1.7E-76 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS01115 de6673e2678851c911fa9fcff769466e 649 Pfam PF13537 Glutamine amidotransferase domain 47 166 1.9E-42 T 09-03-2017 IPR017932 Glutamine amidotransferase type 2 domain LS838_RS07760 80d5b34985dd327d1ca4acf7b590ba8b 470 TIGRFAM TIGR01886 dipeptidase: dipeptidase PepV 2 466 1.8E-255 T 09-03-2017 IPR011291 Peptidase M20A, peptidase V LS838_RS07760 80d5b34985dd327d1ca4acf7b590ba8b 470 Gene3D G3DSA:3.30.70.360 285 370 8.8E-34 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain LS838_RS07760 80d5b34985dd327d1ca4acf7b590ba8b 470 Gene3D G3DSA:3.40.630.10 5 187 2.9E-64 T 09-03-2017 LS838_RS07760 80d5b34985dd327d1ca4acf7b590ba8b 470 Gene3D G3DSA:3.40.630.10 382 466 2.9E-64 T 09-03-2017 LS838_RS07760 80d5b34985dd327d1ca4acf7b590ba8b 470 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 13 461 1.8E-187 T 09-03-2017 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 LS838_RS07760 80d5b34985dd327d1ca4acf7b590ba8b 470 Pfam PF01546 Peptidase family M20/M25/M40 85 462 7.7E-30 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LS838_RS07760 80d5b34985dd327d1ca4acf7b590ba8b 470 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 117 156 - T 09-03-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LS838_RS07760 80d5b34985dd327d1ca4acf7b590ba8b 470 SUPERFAMILY SSF55031 188 371 1.83E-51 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain LS838_RS07760 80d5b34985dd327d1ca4acf7b590ba8b 470 Gene3D G3DSA:3.30.70.360 206 284 1.0E-22 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain LS838_RS07760 80d5b34985dd327d1ca4acf7b590ba8b 470 SUPERFAMILY SSF53187 4 187 2.31E-64 T 09-03-2017 LS838_RS07760 80d5b34985dd327d1ca4acf7b590ba8b 470 SUPERFAMILY SSF53187 383 465 2.31E-64 T 09-03-2017 LS838_RS07760 80d5b34985dd327d1ca4acf7b590ba8b 470 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 82 91 - T 09-03-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LS838_RS09255 4a58c6ef89e1a4d5c9549518d0ff6d4a 219 Pfam PF00239 Resolvase, N terminal domain 66 196 1.5E-20 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS09255 4a58c6ef89e1a4d5c9549518d0ff6d4a 219 SMART SM00857 65 205 7.3E-22 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS09255 4a58c6ef89e1a4d5c9549518d0ff6d4a 219 Gene3D G3DSA:1.10.1660.10 2 50 2.2E-12 T 09-03-2017 LS838_RS09255 4a58c6ef89e1a4d5c9549518d0ff6d4a 219 SUPERFAMILY SSF46955 4 50 2.38E-11 T 09-03-2017 IPR009061 Putative DNA-binding domain LS838_RS09255 4a58c6ef89e1a4d5c9549518d0ff6d4a 219 SMART SM00422 5 67 9.8E-7 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS09255 4a58c6ef89e1a4d5c9549518d0ff6d4a 219 Pfam PF00376 MerR family regulatory protein 6 42 3.3E-12 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS09255 4a58c6ef89e1a4d5c9549518d0ff6d4a 219 SUPERFAMILY SSF53041 65 198 6.93E-22 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS09255 4a58c6ef89e1a4d5c9549518d0ff6d4a 219 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS09255 4a58c6ef89e1a4d5c9549518d0ff6d4a 219 ProSitePatterns PS00397 Site-specific recombinases active site. 68 76 - T 09-03-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 LS838_RS09255 4a58c6ef89e1a4d5c9549518d0ff6d4a 219 Gene3D G3DSA:3.40.50.1390 65 184 3.1E-18 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS08860 fda628c5252e4efb6548343e239a582c 284 SUPERFAMILY SSF53448 5 261 3.49E-26 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS08860 fda628c5252e4efb6548343e239a582c 284 Pfam PF00535 Glycosyl transferase family 2 9 129 8.1E-14 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 LS838_RS08860 fda628c5252e4efb6548343e239a582c 284 Gene3D G3DSA:3.90.550.10 9 184 6.1E-15 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS09160 5dedb69dd074c13bfab8c9d7307710a0 260 Gene3D G3DSA:3.90.190.10 8 92 8.2E-19 T 09-03-2017 IPR029021 Protein-tyrosine phosphatase-like LS838_RS09160 5dedb69dd074c13bfab8c9d7307710a0 260 Gene3D G3DSA:3.90.190.10 125 186 8.2E-19 T 09-03-2017 IPR029021 Protein-tyrosine phosphatase-like LS838_RS09160 5dedb69dd074c13bfab8c9d7307710a0 260 SUPERFAMILY SSF52799 6 258 1.77E-49 T 09-03-2017 IPR029021 Protein-tyrosine phosphatase-like LS838_RS09160 5dedb69dd074c13bfab8c9d7307710a0 260 Pfam PF13350 Tyrosine phosphatase family 7 259 5.5E-61 T 09-03-2017 IPR026893 Tyrosine/serine-protein phosphatase IphP-type LS838_RS01070 fe6ea36bc7d3ea58884779c883dcf458 265 SUPERFAMILY SSF52799 9 263 1.5E-54 T 09-03-2017 IPR029021 Protein-tyrosine phosphatase-like LS838_RS01070 fe6ea36bc7d3ea58884779c883dcf458 265 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 153 163 - T 09-03-2017 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 LS838_RS01070 fe6ea36bc7d3ea58884779c883dcf458 265 Gene3D G3DSA:3.90.190.10 16 95 8.2E-15 T 09-03-2017 IPR029021 Protein-tyrosine phosphatase-like LS838_RS01070 fe6ea36bc7d3ea58884779c883dcf458 265 Gene3D G3DSA:3.90.190.10 127 188 8.2E-15 T 09-03-2017 IPR029021 Protein-tyrosine phosphatase-like LS838_RS01070 fe6ea36bc7d3ea58884779c883dcf458 265 Pfam PF13350 Tyrosine phosphatase family 10 264 1.6E-64 T 09-03-2017 IPR026893 Tyrosine/serine-protein phosphatase IphP-type LS838_RS06235 8329d29516253733f03a8d39b6fbfffd 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 184 4.5E-70 T 09-03-2017 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 LS838_RS06235 8329d29516253733f03a8d39b6fbfffd 204 SMART SM00072 4 187 1.4E-68 T 09-03-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LS838_RS06235 8329d29516253733f03a8d39b6fbfffd 204 SUPERFAMILY SSF52540 4 189 8.02E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06235 8329d29516253733f03a8d39b6fbfffd 204 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 09-03-2017 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 LS838_RS06235 8329d29516253733f03a8d39b6fbfffd 204 Hamap MF_00328 Guanylate kinase [gmk]. 3 187 35.419 T 09-03-2017 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 LS838_RS06235 8329d29516253733f03a8d39b6fbfffd 204 Gene3D G3DSA:3.40.50.300 88 202 5.8E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06235 8329d29516253733f03a8d39b6fbfffd 204 Gene3D G3DSA:3.40.50.300 3 27 5.8E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06235 8329d29516253733f03a8d39b6fbfffd 204 Gene3D G3DSA:3.30.63.10 35 87 1.2E-28 T 09-03-2017 LS838_RS06235 8329d29516253733f03a8d39b6fbfffd 204 Pfam PF00625 Guanylate kinase 7 185 3.2E-50 T 09-03-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LS838_RS03360 197585c7d24ab45f4c4fd2d10cee21d6 314 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 314 38.713 T 09-03-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LS838_RS03360 197585c7d24ab45f4c4fd2d10cee21d6 314 PIRSF PIRSF004486 1 314 5.9E-108 T 09-03-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LS838_RS03360 197585c7d24ab45f4c4fd2d10cee21d6 314 Pfam PF01795 MraW methylase family 2 313 3.2E-125 T 09-03-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LS838_RS03360 197585c7d24ab45f4c4fd2d10cee21d6 314 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 313 5.7E-115 T 09-03-2017 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LS838_RS03360 197585c7d24ab45f4c4fd2d10cee21d6 314 Gene3D G3DSA:1.10.150.170 116 221 1.0E-38 T 09-03-2017 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LS838_RS03360 197585c7d24ab45f4c4fd2d10cee21d6 314 SUPERFAMILY SSF53335 219 314 1.12E-45 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS03360 197585c7d24ab45f4c4fd2d10cee21d6 314 SUPERFAMILY SSF53335 5 117 1.12E-45 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS03360 197585c7d24ab45f4c4fd2d10cee21d6 314 SUPERFAMILY SSF81799 118 219 9.81E-36 T 09-03-2017 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LS838_RS03360 197585c7d24ab45f4c4fd2d10cee21d6 314 Gene3D G3DSA:3.40.50.150 222 314 9.5E-54 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS03360 197585c7d24ab45f4c4fd2d10cee21d6 314 Gene3D G3DSA:3.40.50.150 5 114 9.5E-54 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS07160 6158f8d2ae1cd2a6cf9983841fce1f60 94 Gene3D G3DSA:2.30.33.40 2 93 1.4E-34 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LS838_RS07160 6158f8d2ae1cd2a6cf9983841fce1f60 94 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 1.1E-34 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LS838_RS07160 6158f8d2ae1cd2a6cf9983841fce1f60 94 SUPERFAMILY SSF50129 2 93 8.48E-33 T 09-03-2017 IPR011032 GroES-like LS838_RS07160 6158f8d2ae1cd2a6cf9983841fce1f60 94 SMART SM00883 1 93 2.0E-46 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LS838_RS07160 6158f8d2ae1cd2a6cf9983841fce1f60 94 Hamap MF_00580 10 kDa chaperonin [groS]. 1 94 24.311 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LS838_RS07160 6158f8d2ae1cd2a6cf9983841fce1f60 94 PRINTS PR00297 10kDa chaperonin signature 2 17 3.9E-28 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LS838_RS07160 6158f8d2ae1cd2a6cf9983841fce1f60 94 PRINTS PR00297 10kDa chaperonin signature 59 71 3.9E-28 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LS838_RS07160 6158f8d2ae1cd2a6cf9983841fce1f60 94 PRINTS PR00297 10kDa chaperonin signature 80 93 3.9E-28 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LS838_RS07160 6158f8d2ae1cd2a6cf9983841fce1f60 94 PRINTS PR00297 10kDa chaperonin signature 24 45 3.9E-28 T 09-03-2017 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 LS838_RS07160 6158f8d2ae1cd2a6cf9983841fce1f60 94 ProSitePatterns PS00681 Chaperonins cpn10 signature. 2 26 - T 09-03-2017 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 LS838_RS00990 c6fe350e542726db2a223cd148629441 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 187 2.0E-23 T 09-03-2017 IPR023214 HAD-like domain LS838_RS00990 c6fe350e542726db2a223cd148629441 221 SUPERFAMILY SSF56784 1 208 4.2E-45 T 09-03-2017 IPR023214 HAD-like domain LS838_RS00990 c6fe350e542726db2a223cd148629441 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 151 171 3.8E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LS838_RS00990 c6fe350e542726db2a223cd148629441 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 3.8E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LS838_RS00990 c6fe350e542726db2a223cd148629441 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 133 149 3.8E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LS838_RS00990 c6fe350e542726db2a223cd148629441 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 63 188 5.7E-17 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LS838_RS00990 c6fe350e542726db2a223cd148629441 221 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 3 189 7.6E-56 T 09-03-2017 IPR010976 Beta-phosphoglucomutase hydrolase LS838_RS00990 c6fe350e542726db2a223cd148629441 221 Gene3D G3DSA:3.40.50.1000 95 208 7.0E-32 T 09-03-2017 IPR023214 HAD-like domain LS838_RS00990 c6fe350e542726db2a223cd148629441 221 Gene3D G3DSA:3.40.50.1000 1 15 7.0E-32 T 09-03-2017 IPR023214 HAD-like domain LS838_RS00990 c6fe350e542726db2a223cd148629441 221 Gene3D G3DSA:1.10.150.240 16 93 1.3E-26 T 09-03-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 LS838_RS00990 c6fe350e542726db2a223cd148629441 221 TIGRFAM TIGR01990 bPGM: beta-phosphoglucomutase 2 190 4.2E-72 T 09-03-2017 IPR010972 Beta-phosphoglucomutase GO:0000287|GO:0005975|GO:0008801 KEGG: 00500+5.4.2.6|MetaCyc: PWY-2721|MetaCyc: PWY-2722|MetaCyc: PWY-6317|MetaCyc: PWY-7459 LS838_RS09245 e1d9d94eee63326835c9a8d749d84d0c 403 SUPERFAMILY SSF141523 273 403 1.2E-30 T 09-03-2017 LS838_RS09245 e1d9d94eee63326835c9a8d749d84d0c 403 Pfam PF03734 L,D-transpeptidase catalytic domain 276 402 4.7E-18 T 09-03-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 LS838_RS09245 e1d9d94eee63326835c9a8d749d84d0c 403 SUPERFAMILY SSF143985 141 262 3.79E-26 T 09-03-2017 LS838_RS09245 e1d9d94eee63326835c9a8d749d84d0c 403 Pfam PF12229 Putative peptidoglycan binding domain 139 249 2.1E-9 T 09-03-2017 IPR022029 Putative peptidoglycan binding domain LS838_RS09245 e1d9d94eee63326835c9a8d749d84d0c 403 Gene3D G3DSA:2.40.440.10 274 403 5.5E-19 T 09-03-2017 LS838_RS07120 10b4863f020290a5ff408788efd64877 371 Pfam PF11799 impB/mucB/samB family C-terminal domain 250 361 3.4E-18 T 09-03-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 LS838_RS07120 10b4863f020290a5ff408788efd64877 371 Gene3D G3DSA:3.30.1490.100 258 364 1.1E-25 T 09-03-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 LS838_RS07120 10b4863f020290a5ff408788efd64877 371 Gene3D G3DSA:1.10.150.20 182 255 5.9E-16 T 09-03-2017 LS838_RS07120 10b4863f020290a5ff408788efd64877 371 Gene3D G3DSA:3.30.70.270 85 179 3.5E-24 T 09-03-2017 LS838_RS07120 10b4863f020290a5ff408788efd64877 371 Pfam PF11798 IMS family HHH motif 183 214 2.7E-7 T 09-03-2017 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 LS838_RS07120 10b4863f020290a5ff408788efd64877 371 SUPERFAMILY SSF100879 258 367 2.04E-21 T 09-03-2017 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 LS838_RS07120 10b4863f020290a5ff408788efd64877 371 Hamap MF_01113 DNA polymerase IV [dinB]. 13 367 32.167 T 09-03-2017 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 LS838_RS07120 10b4863f020290a5ff408788efd64877 371 SUPERFAMILY SSF56672 6 251 1.42E-75 T 09-03-2017 LS838_RS07120 10b4863f020290a5ff408788efd64877 371 Pfam PF00817 impB/mucB/samB family 19 171 1.4E-42 T 09-03-2017 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 LS838_RS03055 42006e32cd763673605d2f80ea2e5103 282 SUPERFAMILY SSF52151 2 275 2.22E-41 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LS838_RS03055 42006e32cd763673605d2f80ea2e5103 282 Pfam PF01734 Patatin-like phospholipase 5 171 4.8E-19 T 09-03-2017 IPR002641 Patatin/Phospholipase A2-related GO:0006629 LS838_RS00530 0ec6325e26616bfaea16a33e4577b4f8 525 ProSitePatterns PS00211 ABC transporters family signature. 454 468 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS00530 0ec6325e26616bfaea16a33e4577b4f8 525 SUPERFAMILY SSF52540 322 524 1.61E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00530 0ec6325e26616bfaea16a33e4577b4f8 525 SUPERFAMILY SSF90123 13 290 1.7E-22 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS00530 0ec6325e26616bfaea16a33e4577b4f8 525 Gene3D G3DSA:3.40.50.300 339 519 7.6E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00530 0ec6325e26616bfaea16a33e4577b4f8 525 SMART SM00382 343 525 6.6E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS00530 0ec6325e26616bfaea16a33e4577b4f8 525 Pfam PF00005 ABC transporter 339 481 2.3E-26 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS00530 0ec6325e26616bfaea16a33e4577b4f8 525 Gene3D G3DSA:1.20.1560.10 15 291 5.1E-13 T 09-03-2017 LS838_RS01660 22d1ab7d06fe4a4491c6fa7cd0f1eea5 376 Gene3D G3DSA:2.40.37.10 225 374 1.0E-49 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 LS838_RS01660 22d1ab7d06fe4a4491c6fa7cd0f1eea5 376 SMART SM01005 249 374 2.0E-56 T 09-03-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LS838_RS01660 22d1ab7d06fe4a4491c6fa7cd0f1eea5 376 PRINTS PR00992 Alanine racemase signature 204 231 3.6E-58 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LS838_RS01660 22d1ab7d06fe4a4491c6fa7cd0f1eea5 376 PRINTS PR00992 Alanine racemase signature 265 280 3.6E-58 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LS838_RS01660 22d1ab7d06fe4a4491c6fa7cd0f1eea5 376 PRINTS PR00992 Alanine racemase signature 356 369 3.6E-58 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LS838_RS01660 22d1ab7d06fe4a4491c6fa7cd0f1eea5 376 PRINTS PR00992 Alanine racemase signature 129 141 3.6E-58 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LS838_RS01660 22d1ab7d06fe4a4491c6fa7cd0f1eea5 376 PRINTS PR00992 Alanine racemase signature 164 175 3.6E-58 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LS838_RS01660 22d1ab7d06fe4a4491c6fa7cd0f1eea5 376 PRINTS PR00992 Alanine racemase signature 68 86 3.6E-58 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LS838_RS01660 22d1ab7d06fe4a4491c6fa7cd0f1eea5 376 PRINTS PR00992 Alanine racemase signature 282 297 3.6E-58 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LS838_RS01660 22d1ab7d06fe4a4491c6fa7cd0f1eea5 376 PRINTS PR00992 Alanine racemase signature 32 48 3.6E-58 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LS838_RS01660 22d1ab7d06fe4a4491c6fa7cd0f1eea5 376 PRINTS PR00992 Alanine racemase signature 302 319 3.6E-58 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LS838_RS01660 22d1ab7d06fe4a4491c6fa7cd0f1eea5 376 Pfam PF01168 Alanine racemase, N-terminal domain 13 231 7.5E-65 T 09-03-2017 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LS838_RS01660 22d1ab7d06fe4a4491c6fa7cd0f1eea5 376 SUPERFAMILY SSF50621 244 374 5.23E-44 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 LS838_RS01660 22d1ab7d06fe4a4491c6fa7cd0f1eea5 376 Hamap MF_01201 Alanine racemase. 6 374 31.851 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LS838_RS01660 22d1ab7d06fe4a4491c6fa7cd0f1eea5 376 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 37 47 - T 09-03-2017 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LS838_RS01660 22d1ab7d06fe4a4491c6fa7cd0f1eea5 376 Gene3D G3DSA:3.20.20.10 15 224 4.6E-69 T 09-03-2017 IPR029066 PLP-binding barrel LS838_RS01660 22d1ab7d06fe4a4491c6fa7cd0f1eea5 376 Pfam PF00842 Alanine racemase, C-terminal domain 249 373 5.5E-34 T 09-03-2017 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LS838_RS01660 22d1ab7d06fe4a4491c6fa7cd0f1eea5 376 SUPERFAMILY SSF51419 13 249 4.07E-61 T 09-03-2017 IPR029066 PLP-binding barrel LS838_RS01660 22d1ab7d06fe4a4491c6fa7cd0f1eea5 376 TIGRFAM TIGR00492 alr: alanine racemase 8 373 1.9E-103 T 09-03-2017 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 LS838_RS07690 4cf76c3398e2508ed2c8cfe0cb4d3f5a 449 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 64 75 - T 09-03-2017 IPR000169 Cysteine peptidase, cysteine active site LS838_RS07690 4cf76c3398e2508ed2c8cfe0cb4d3f5a 449 Gene3D G3DSA:3.90.70.10 51 446 3.2E-168 T 09-03-2017 LS838_RS07690 4cf76c3398e2508ed2c8cfe0cb4d3f5a 449 Pfam PF03051 Peptidase C1-like family 4 443 4.0E-210 T 09-03-2017 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 LS838_RS07690 4cf76c3398e2508ed2c8cfe0cb4d3f5a 449 PIRSF PIRSF005700 1 447 1.8E-179 T 09-03-2017 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 LS838_RS07690 4cf76c3398e2508ed2c8cfe0cb4d3f5a 449 SUPERFAMILY SSF54001 1 445 1.33E-133 T 09-03-2017 LS838_RS05950 f378f589efc32cf98d7bb3c276d6362b 185 Gene3D G3DSA:1.10.132.20 66 184 5.6E-41 T 09-03-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 LS838_RS05950 f378f589efc32cf98d7bb3c276d6362b 185 Pfam PF01765 Ribosome recycling factor 21 182 3.3E-60 T 09-03-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 LS838_RS05950 f378f589efc32cf98d7bb3c276d6362b 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 25.752 T 09-03-2017 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 LS838_RS05950 f378f589efc32cf98d7bb3c276d6362b 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 184 6.9E-70 T 09-03-2017 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 LS838_RS05950 f378f589efc32cf98d7bb3c276d6362b 185 SUPERFAMILY SSF55194 2 183 1.23E-66 T 09-03-2017 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 LS838_RS07825 d2299bd542d499361676f35601b94307 492 Gene3D G3DSA:3.40.50.1100 124 205 2.2E-7 T 09-03-2017 LS838_RS07825 d2299bd542d499361676f35601b94307 492 Gene3D G3DSA:3.90.1380.10 1 84 3.9E-23 T 09-03-2017 IPR029144 Threonine synthase, N-terminal LS838_RS07825 d2299bd542d499361676f35601b94307 492 TIGRFAM TIGR00260 thrC: threonine synthase 100 443 2.6E-72 T 09-03-2017 IPR004450 Threonine synthase-like LS838_RS07825 d2299bd542d499361676f35601b94307 492 Gene3D G3DSA:3.40.50.1100 206 441 5.1E-92 T 09-03-2017 LS838_RS07825 d2299bd542d499361676f35601b94307 492 Pfam PF14821 Threonine synthase N terminus 3 80 8.2E-20 T 09-03-2017 IPR029144 Threonine synthase, N-terminal LS838_RS07825 d2299bd542d499361676f35601b94307 492 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 103 421 5.8E-13 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LS838_RS07825 d2299bd542d499361676f35601b94307 492 SUPERFAMILY SSF53686 1 443 1.98E-142 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LS838_RS04950 424ae7e1a1ab399f725ef39dbc9267e7 99 Pfam PF00005 ABC transporter 4 59 1.2E-8 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS04950 424ae7e1a1ab399f725ef39dbc9267e7 99 SUPERFAMILY SSF52540 3 90 1.5E-22 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04950 424ae7e1a1ab399f725ef39dbc9267e7 99 Gene3D G3DSA:3.40.50.300 2 89 9.0E-21 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01330 32452adef18760a72ed49612e5f56e93 45 Pfam PF06161 Protein of unknown function (DUF975) 1 37 1.8E-10 T 09-03-2017 IPR010380 Protein of unknown function DUF975 LS838_RS07455 f45c6c0a73e6e6fde2e4349c9e2a0580 147 Pfam PF00636 Ribonuclease III domain 20 116 2.5E-12 T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 LS838_RS07455 f45c6c0a73e6e6fde2e4349c9e2a0580 147 SUPERFAMILY SSF69065 13 136 3.84E-39 T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 LS838_RS07455 f45c6c0a73e6e6fde2e4349c9e2a0580 147 Gene3D G3DSA:1.10.1520.10 10 139 6.4E-47 T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 LS838_RS07455 f45c6c0a73e6e6fde2e4349c9e2a0580 147 PIRSF PIRSF005520 5 142 1.8E-44 T 09-03-2017 IPR008226 Mini-ribonuclease 3 family LS838_RS07455 f45c6c0a73e6e6fde2e4349c9e2a0580 147 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 11 137 25.975 T 09-03-2017 IPR008226 Mini-ribonuclease 3 family LS838_RS03950 5885db70e192d821ced9e05dba1008ca 202 TIGRFAM TIGR02548 casB_cse2: CRISPR type I-E/ECOLI-associated protein CasB/Cse2 13 193 3.7E-16 T 09-03-2017 IPR013382 CRISPR-associated protein Cse2 LS838_RS03950 5885db70e192d821ced9e05dba1008ca 202 Pfam PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) 27 191 1.0E-30 T 09-03-2017 IPR013382 CRISPR-associated protein Cse2 LS838_RS06300 8681c6d2c127ca5bcc114cd159212bc6 97 PRINTS PR00063 Ribosomal protein L27 signature 63 87 1.3E-35 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06300 8681c6d2c127ca5bcc114cd159212bc6 97 PRINTS PR00063 Ribosomal protein L27 signature 38 62 1.3E-35 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06300 8681c6d2c127ca5bcc114cd159212bc6 97 PRINTS PR00063 Ribosomal protein L27 signature 13 37 1.3E-35 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06300 8681c6d2c127ca5bcc114cd159212bc6 97 ProSitePatterns PS00831 Ribosomal protein L27 signature. 43 57 - T 09-03-2017 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS06300 8681c6d2c127ca5bcc114cd159212bc6 97 TIGRFAM TIGR00062 L27: ribosomal protein bL27 11 90 7.4E-38 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06300 8681c6d2c127ca5bcc114cd159212bc6 97 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 10 93 26.511 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06300 8681c6d2c127ca5bcc114cd159212bc6 97 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 37 78 5.0E-17 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06300 8681c6d2c127ca5bcc114cd159212bc6 97 Gene3D G3DSA:2.40.50.100 29 93 1.5E-31 T 09-03-2017 LS838_RS06300 8681c6d2c127ca5bcc114cd159212bc6 97 Pfam PF01016 Ribosomal L27 protein 11 90 1.7E-34 T 09-03-2017 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06300 8681c6d2c127ca5bcc114cd159212bc6 97 SUPERFAMILY SSF110324 11 93 3.38E-31 T 09-03-2017 LS838_RS01240 3abf2e34238364b319df96c8f4daaf28 421 Pfam PF00579 tRNA synthetases class I (W and Y) 32 324 6.7E-85 T 09-03-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS01240 3abf2e34238364b319df96c8f4daaf28 421 SUPERFAMILY SSF52374 5 324 1.3E-107 T 09-03-2017 LS838_RS01240 3abf2e34238364b319df96c8f4daaf28 421 Gene3D G3DSA:1.10.240.10 234 317 7.3E-46 T 09-03-2017 LS838_RS01240 3abf2e34238364b319df96c8f4daaf28 421 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 419 2.4E-129 T 09-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 LS838_RS01240 3abf2e34238364b319df96c8f4daaf28 421 Gene3D G3DSA:3.10.290.10 318 419 3.0E-28 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS01240 3abf2e34238364b319df96c8f4daaf28 421 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 419 43.679 T 09-03-2017 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 LS838_RS01240 3abf2e34238364b319df96c8f4daaf28 421 SUPERFAMILY SSF55174 322 419 1.09E-20 T 09-03-2017 LS838_RS01240 3abf2e34238364b319df96c8f4daaf28 421 Pfam PF01479 S4 domain 355 396 5.5E-8 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS01240 3abf2e34238364b319df96c8f4daaf28 421 Gene3D G3DSA:3.40.50.620 5 233 8.4E-96 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS01240 3abf2e34238364b319df96c8f4daaf28 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 47 69 2.5E-29 T 09-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 LS838_RS01240 3abf2e34238364b319df96c8f4daaf28 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 2.5E-29 T 09-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 LS838_RS01240 3abf2e34238364b319df96c8f4daaf28 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 182 204 2.5E-29 T 09-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 LS838_RS01240 3abf2e34238364b319df96c8f4daaf28 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 217 229 2.5E-29 T 09-03-2017 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 LS838_RS01240 3abf2e34238364b319df96c8f4daaf28 421 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 53 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS00920 d25ebfbf9f9b330136d66440ce25495c 216 SUPERFAMILY SSF46785 154 215 1.31E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS00920 d25ebfbf9f9b330136d66440ce25495c 216 Pfam PF13545 Crp-like helix-turn-helix domain 155 215 2.3E-14 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LS838_RS00920 d25ebfbf9f9b330136d66440ce25495c 216 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 174 190 1.1E-6 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LS838_RS00920 d25ebfbf9f9b330136d66440ce25495c 216 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 190 205 1.1E-6 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LS838_RS00920 d25ebfbf9f9b330136d66440ce25495c 216 Pfam PF00027 Cyclic nucleotide-binding domain 35 120 4.5E-13 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain LS838_RS00920 d25ebfbf9f9b330136d66440ce25495c 216 SMART SM00100 15 137 3.0E-10 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain LS838_RS00920 d25ebfbf9f9b330136d66440ce25495c 216 SUPERFAMILY SSF51206 9 142 3.27E-28 T 09-03-2017 IPR018490 Cyclic nucleotide-binding-like LS838_RS00920 d25ebfbf9f9b330136d66440ce25495c 216 Gene3D G3DSA:2.60.120.10 10 142 2.9E-28 T 09-03-2017 IPR014710 RmlC-like jelly roll fold LS838_RS00920 d25ebfbf9f9b330136d66440ce25495c 216 Gene3D G3DSA:1.10.10.10 155 215 1.3E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS00920 d25ebfbf9f9b330136d66440ce25495c 216 SMART SM00419 168 216 5.0E-14 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LS838_RS03185 231423beea721fc6709c5cf577ff0053 280 Gene3D G3DSA:3.40.50.150 86 278 4.5E-51 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS03185 231423beea721fc6709c5cf577ff0053 280 Gene3D G3DSA:1.10.8.10 22 84 4.4E-9 T 09-03-2017 LS838_RS03185 231423beea721fc6709c5cf577ff0053 280 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 24 274 2.9E-74 T 09-03-2017 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 LS838_RS03185 231423beea721fc6709c5cf577ff0053 280 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 5 278 35.18 T 09-03-2017 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 LS838_RS03185 231423beea721fc6709c5cf577ff0053 280 SUPERFAMILY SSF53335 19 254 9.09E-44 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS03185 231423beea721fc6709c5cf577ff0053 280 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 18 280 2.5E-51 T 09-03-2017 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 LS838_RS03185 231423beea721fc6709c5cf577ff0053 280 Pfam PF05175 Methyltransferase small domain 105 193 3.4E-10 T 09-03-2017 IPR007848 Methyltransferase small domain GO:0008168 LS838_RS03185 231423beea721fc6709c5cf577ff0053 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 181 187 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 Gene3D G3DSA:3.30.420.10 314 500 1.7E-47 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 Gene3D G3DSA:3.30.70.370 778 887 6.9E-65 T 09-03-2017 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 Gene3D G3DSA:3.30.70.370 620 669 6.9E-65 T 09-03-2017 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 TIGRFAM TIGR00593 pola: DNA polymerase I 6 887 0.0 T 09-03-2017 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 PRINTS PR00868 DNA-polymerase family A (pol I) signature 635 650 1.4E-76 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 PRINTS PR00868 DNA-polymerase family A (pol I) signature 804 820 1.4E-76 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 PRINTS PR00868 DNA-polymerase family A (pol I) signature 612 634 1.4E-76 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 PRINTS PR00868 DNA-polymerase family A (pol I) signature 713 738 1.4E-76 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 PRINTS PR00868 DNA-polymerase family A (pol I) signature 834 847 1.4E-76 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 PRINTS PR00868 DNA-polymerase family A (pol I) signature 658 681 1.4E-76 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 PRINTS PR00868 DNA-polymerase family A (pol I) signature 750 761 1.4E-76 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 PRINTS PR00868 DNA-polymerase family A (pol I) signature 688 701 1.4E-76 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 PRINTS PR00868 DNA-polymerase family A (pol I) signature 772 783 1.4E-76 T 09-03-2017 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 SMART SM00475 4 267 2.6E-134 T 09-03-2017 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 Pfam PF00476 DNA polymerase family A 509 885 1.4E-155 T 09-03-2017 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 SUPERFAMILY SSF47807 176 289 3.89E-33 T 09-03-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 ProSitePatterns PS00447 DNA polymerase family A signature. 713 732 - T 09-03-2017 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 Gene3D G3DSA:1.10.150.20 670 777 9.6E-35 T 09-03-2017 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 SUPERFAMILY SSF88723 3 172 9.08E-51 T 09-03-2017 IPR029060 PIN domain-like LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 SMART SM00279 178 213 8.5E-17 T 09-03-2017 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 SMART SM00474 307 476 2.0E-9 T 09-03-2017 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 SUPERFAMILY SSF53098 316 477 1.35E-35 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 SMART SM00482 643 851 3.6E-108 T 09-03-2017 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 Gene3D G3DSA:1.20.1060.10 501 619 5.7E-41 T 09-03-2017 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 176 269 7.9E-33 T 09-03-2017 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 Gene3D G3DSA:3.40.50.1010 4 186 6.8E-68 T 09-03-2017 IPR029060 PIN domain-like LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 Gene3D G3DSA:1.10.150.20 187 249 4.8E-31 T 09-03-2017 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 SUPERFAMILY SSF56672 481 887 1.78E-152 T 09-03-2017 LS838_RS06720 0544fa3418864c3bdd88a9e65a6c1cb7 887 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 171 2.0E-50 T 09-03-2017 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 LS838_RS06510 4cf9c34c562fbad8cf2e4ef15116e702 445 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 18 100 1.1E-25 T 09-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LS838_RS06510 4cf9c34c562fbad8cf2e4ef15116e702 445 Gene3D G3DSA:3.30.590.10 111 432 1.7E-119 T 09-03-2017 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 LS838_RS06510 4cf9c34c562fbad8cf2e4ef15116e702 445 Gene3D G3DSA:3.10.20.70 7 110 6.0E-35 T 09-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LS838_RS06510 4cf9c34c562fbad8cf2e4ef15116e702 445 SUPERFAMILY SSF54368 7 106 9.94E-29 T 09-03-2017 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LS838_RS06510 4cf9c34c562fbad8cf2e4ef15116e702 445 SMART SM01230 107 356 7.6E-124 T 09-03-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LS838_RS06510 4cf9c34c562fbad8cf2e4ef15116e702 445 SUPERFAMILY SSF55931 107 444 2.26E-116 T 09-03-2017 LS838_RS06510 4cf9c34c562fbad8cf2e4ef15116e702 445 ProSitePatterns PS00180 Glutamine synthetase signature 1. 53 71 - T 09-03-2017 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 LS838_RS06510 4cf9c34c562fbad8cf2e4ef15116e702 445 Pfam PF00120 Glutamine synthetase, catalytic domain 108 442 1.5E-131 T 09-03-2017 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LS838_RS06510 4cf9c34c562fbad8cf2e4ef15116e702 445 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 9 444 4.7E-154 T 09-03-2017 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 LS838_RS06510 4cf9c34c562fbad8cf2e4ef15116e702 445 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 236 251 - T 09-03-2017 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 LS838_RS03415 b2ddc373b596925f2d62849eab477f76 265 Gene3D G3DSA:3.10.290.10 184 239 8.6E-13 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS03415 b2ddc373b596925f2d62849eab477f76 265 SMART SM00363 186 243 5.9E-7 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS03415 b2ddc373b596925f2d62849eab477f76 265 SUPERFAMILY SSF55174 41 130 1.28E-24 T 09-03-2017 LS838_RS03415 b2ddc373b596925f2d62849eab477f76 265 SUPERFAMILY SSF55174 183 247 1.28E-24 T 09-03-2017 LS838_RS03415 b2ddc373b596925f2d62849eab477f76 265 Pfam PF01479 S4 domain 186 231 1.5E-6 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS00465 56b8381b0cc327620196e0d7ee919cec 302 Gene3D G3DSA:3.90.110.10 147 301 1.5E-41 T 09-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 LS838_RS00465 56b8381b0cc327620196e0d7ee919cec 302 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 146 298 3.2E-11 T 09-03-2017 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 LS838_RS00465 56b8381b0cc327620196e0d7ee919cec 302 PRINTS PR00086 L-lactate dehydrogenase signature 28 52 1.9E-27 T 09-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 LS838_RS00465 56b8381b0cc327620196e0d7ee919cec 302 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 1.9E-27 T 09-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 LS838_RS00465 56b8381b0cc327620196e0d7ee919cec 302 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 1.9E-27 T 09-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 LS838_RS00465 56b8381b0cc327620196e0d7ee919cec 302 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 1.9E-27 T 09-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 LS838_RS00465 56b8381b0cc327620196e0d7ee919cec 302 PRINTS PR00086 L-lactate dehydrogenase signature 3 27 1.9E-27 T 09-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 LS838_RS00465 56b8381b0cc327620196e0d7ee919cec 302 PIRSF PIRSF000102 1 302 1.1E-77 T 09-03-2017 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 LS838_RS00465 56b8381b0cc327620196e0d7ee919cec 302 SUPERFAMILY SSF51735 1 145 8.62E-37 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS00465 56b8381b0cc327620196e0d7ee919cec 302 SUPERFAMILY SSF56327 144 299 2.74E-40 T 09-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 LS838_RS00465 56b8381b0cc327620196e0d7ee919cec 302 Gene3D G3DSA:3.40.50.720 1 146 1.5E-34 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS00465 56b8381b0cc327620196e0d7ee919cec 302 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 3 143 9.0E-20 T 09-03-2017 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 Gene3D G3DSA:3.40.50.20 4 107 1.3E-42 T 09-03-2017 IPR016185 Pre-ATP-grasp domain LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 SMART SM01096 420 540 1.4E-52 T 09-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 Gene3D G3DSA:3.40.50.1380 934 1060 8.5E-34 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 SMART SM00851 952 1038 1.1E-16 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 Gene3D G3DSA:3.30.1490.20 682 746 1.1E-20 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 Gene3D G3DSA:3.30.1490.20 142 199 2.7E-24 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 703 717 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 6.4E-39 T 09-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.6E-61 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.6E-61 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.6E-61 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.6E-61 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 1.6E-61 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 1.6E-61 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.6E-61 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 833 840 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 9.9E-82 T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 667 870 2.4E-36 T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 09-03-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 Gene3D G3DSA:3.40.50.20 533 656 3.5E-58 T 09-03-2017 IPR016185 Pre-ATP-grasp domain LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 Gene3D G3DSA:1.10.1030.10 399 532 5.7E-46 T 09-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1059 12.753 T 09-03-2017 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 Pfam PF02142 MGS-like domain 953 1038 6.7E-15 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 SUPERFAMILY SSF56059 128 399 9.37E-107 T 09-03-2017 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 SUPERFAMILY SSF52440 1 127 5.61E-48 T 09-03-2017 IPR016185 Pre-ATP-grasp domain LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 SMART SM01209 673 839 9.4E-4 T 09-03-2017 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 SUPERFAMILY SSF56059 667 930 4.07E-94 T 09-03-2017 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 SUPERFAMILY SSF52335 932 1055 1.26E-30 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 Gene3D G3DSA:3.30.470.20 747 930 3.7E-70 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 Gene3D G3DSA:3.30.470.20 200 398 2.1E-75 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 SUPERFAMILY SSF48108 394 546 5.62E-44 T 09-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS05060 6879a7183fbbec5909d7699883af6b2b 1066 SUPERFAMILY SSF52440 551 669 1.58E-49 T 09-03-2017 IPR016185 Pre-ATP-grasp domain LS838_RS00060 d719e0e60625dafcebeae44b5f5115c3 456 Gene3D G3DSA:3.40.50.300 169 449 7.4E-99 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00060 d719e0e60625dafcebeae44b5f5115c3 456 SUPERFAMILY SSF52540 182 439 8.34E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00060 d719e0e60625dafcebeae44b5f5115c3 456 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 10 449 5.0E-167 T 09-03-2017 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 LS838_RS00060 d719e0e60625dafcebeae44b5f5115c3 456 Gene3D G3DSA:1.10.860.10 10 111 7.2E-33 T 09-03-2017 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal LS838_RS00060 d719e0e60625dafcebeae44b5f5115c3 456 SUPERFAMILY SSF48024 7 119 7.06E-33 T 09-03-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 LS838_RS00060 d719e0e60625dafcebeae44b5f5115c3 456 Pfam PF00772 DnaB-like helicase N terminal domain 10 109 2.3E-30 T 09-03-2017 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 LS838_RS00060 d719e0e60625dafcebeae44b5f5115c3 456 Pfam PF03796 DnaB-like helicase C terminal domain 184 447 4.7E-107 T 09-03-2017 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 LS838_RS01645 044d21758f7d32961b7354c2509ad9d1 455 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 3 455 33.247 T 09-03-2017 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS01645 044d21758f7d32961b7354c2509ad9d1 455 SUPERFAMILY SSF53244 312 454 1.13E-31 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LS838_RS01645 044d21758f7d32961b7354c2509ad9d1 455 SUPERFAMILY SSF63418 1 98 8.76E-23 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 LS838_RS01645 044d21758f7d32961b7354c2509ad9d1 455 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 454 8.2E-118 T 09-03-2017 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS01645 044d21758f7d32961b7354c2509ad9d1 455 Gene3D G3DSA:3.90.190.20 310 455 2.2E-34 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LS838_RS01645 044d21758f7d32961b7354c2509ad9d1 455 Gene3D G3DSA:3.40.1190.10 84 308 1.4E-67 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LS838_RS01645 044d21758f7d32961b7354c2509ad9d1 455 SUPERFAMILY SSF53623 101 309 7.06E-53 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LS838_RS01645 044d21758f7d32961b7354c2509ad9d1 455 Pfam PF02875 Mur ligase family, glutamate ligase domain 325 388 4.0E-7 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LS838_RS01645 044d21758f7d32961b7354c2509ad9d1 455 Gene3D G3DSA:3.40.1390.10 1 71 1.5E-22 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 LS838_RS01645 044d21758f7d32961b7354c2509ad9d1 455 Pfam PF08245 Mur ligase middle domain 107 290 6.3E-50 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LS838_RS01645 044d21758f7d32961b7354c2509ad9d1 455 Pfam PF01225 Mur ligase family, catalytic domain 24 96 1.1E-10 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 LS838_RS02465 1770bacd7ddc75bfd59466e3a3e898f7 190 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 14 176 1.9E-56 T 09-03-2017 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 LS838_RS02465 1770bacd7ddc75bfd59466e3a3e898f7 190 Gene3D G3DSA:3.40.50.2020 2 185 9.8E-75 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS02465 1770bacd7ddc75bfd59466e3a3e898f7 190 Pfam PF00156 Phosphoribosyl transferase domain 18 162 2.3E-26 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 LS838_RS02465 1770bacd7ddc75bfd59466e3a3e898f7 190 SUPERFAMILY SSF53271 4 182 1.31E-54 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS07230 042f072dc63f49d4ab8658bcb040b2be 199 SUPERFAMILY SSF111304 3 199 9.55E-73 T 09-03-2017 IPR023627 Recombination protein RecR LS838_RS07230 042f072dc63f49d4ab8658bcb040b2be 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 101.263 T 09-03-2017 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 LS838_RS07230 042f072dc63f49d4ab8658bcb040b2be 199 SMART SM00493 80 166 7.7E-15 T 09-03-2017 IPR006171 Toprim domain LS838_RS07230 042f072dc63f49d4ab8658bcb040b2be 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 09-03-2017 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 LS838_RS07230 042f072dc63f49d4ab8658bcb040b2be 199 Pfam PF13662 Toprim domain 80 172 1.6E-24 T 09-03-2017 IPR006171 Toprim domain LS838_RS07230 042f072dc63f49d4ab8658bcb040b2be 199 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 6.2E-77 T 09-03-2017 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 LS838_RS07230 042f072dc63f49d4ab8658bcb040b2be 199 Pfam PF02132 RecR protein 39 78 1.1E-18 T 09-03-2017 IPR023628 Recombination protein RecR, C4-type zinc finger LS838_RS07045 a528772741268f5e4e0110b07426f605 368 SUPERFAMILY SSF53092 3 136 1.92E-31 T 09-03-2017 IPR028980 Creatinase/Aminopeptidase P, N-terminal LS838_RS07045 a528772741268f5e4e0110b07426f605 368 SUPERFAMILY SSF55920 137 364 7.07E-74 T 09-03-2017 IPR000994 Peptidase M24, structural domain LS838_RS07045 a528772741268f5e4e0110b07426f605 368 Gene3D G3DSA:3.90.230.10 137 364 6.2E-74 T 09-03-2017 IPR000994 Peptidase M24, structural domain LS838_RS07045 a528772741268f5e4e0110b07426f605 368 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 294 306 - T 09-03-2017 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site LS838_RS07045 a528772741268f5e4e0110b07426f605 368 Pfam PF00557 Metallopeptidase family M24 145 348 7.9E-60 T 09-03-2017 IPR000994 Peptidase M24, structural domain LS838_RS07045 a528772741268f5e4e0110b07426f605 368 Pfam PF01321 Creatinase/Prolidase N-terminal domain 3 136 6.3E-24 T 09-03-2017 IPR000587 Creatinase, N-terminal GO:0016787 LS838_RS07045 a528772741268f5e4e0110b07426f605 368 Gene3D G3DSA:3.40.350.10 3 135 2.4E-28 T 09-03-2017 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal LS838_RS00860 cc3cbfb01844ba71001905540c07b4ed 123 Pfam PF04343 Protein of unknown function, DUF488 7 114 7.6E-31 T 09-03-2017 IPR007438 Protein of unknown function DUF488 LS838_RS02965 799ab613e52a548fa932215ef4f43d5a 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 58 79 5.4E-55 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LS838_RS02965 799ab613e52a548fa932215ef4f43d5a 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 101 114 5.4E-55 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LS838_RS02965 799ab613e52a548fa932215ef4f43d5a 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 85 99 5.4E-55 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LS838_RS02965 799ab613e52a548fa932215ef4f43d5a 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 176 195 5.4E-55 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LS838_RS02965 799ab613e52a548fa932215ef4f43d5a 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 302 328 5.4E-55 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LS838_RS02965 799ab613e52a548fa932215ef4f43d5a 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 42 58 5.4E-55 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LS838_RS02965 799ab613e52a548fa932215ef4f43d5a 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 132 148 5.4E-55 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LS838_RS02965 799ab613e52a548fa932215ef4f43d5a 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 158 172 5.4E-55 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LS838_RS02965 799ab613e52a548fa932215ef4f43d5a 360 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 257 276 5.4E-55 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LS838_RS02965 799ab613e52a548fa932215ef4f43d5a 360 SUPERFAMILY SSF53850 36 355 2.95E-91 T 09-03-2017 LS838_RS02965 799ab613e52a548fa932215ef4f43d5a 360 Pfam PF13416 Bacterial extracellular solute-binding protein 52 323 1.2E-34 T 09-03-2017 LS838_RS02965 799ab613e52a548fa932215ef4f43d5a 360 Gene3D G3DSA:3.40.190.10 143 278 3.6E-24 T 09-03-2017 LS838_RS02965 799ab613e52a548fa932215ef4f43d5a 360 Gene3D G3DSA:3.40.190.10 35 141 1.2E-62 T 09-03-2017 LS838_RS02965 799ab613e52a548fa932215ef4f43d5a 360 Gene3D G3DSA:3.40.190.10 279 323 1.2E-62 T 09-03-2017 LS838_RS02965 799ab613e52a548fa932215ef4f43d5a 360 PIRSF PIRSF019574 1 358 5.7E-131 T 09-03-2017 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 LS838_RS08075 c1bd171c8b9449deb1479c1cd95388af 789 SUPERFAMILY SSF50249 222 642 6.28E-140 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS08075 c1bd171c8b9449deb1479c1cd95388af 789 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 62 724 7.3E-197 T 09-03-2017 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 LS838_RS08075 c1bd171c8b9449deb1479c1cd95388af 789 Pfam PF08206 Ribonuclease B OB domain 75 131 1.4E-14 T 09-03-2017 IPR013223 Ribonuclease B, N-terminal OB domain LS838_RS08075 c1bd171c8b9449deb1479c1cd95388af 789 SMART SM00316 643 725 2.2E-12 T 09-03-2017 IPR022967 RNA-binding domain, S1 LS838_RS08075 c1bd171c8b9449deb1479c1cd95388af 789 Pfam PF00773 RNB domain 264 595 2.4E-105 T 09-03-2017 LS838_RS08075 c1bd171c8b9449deb1479c1cd95388af 789 Pfam PF00575 S1 RNA binding domain 642 723 8.9E-13 T 09-03-2017 IPR003029 S1 domain GO:0003676 LS838_RS08075 c1bd171c8b9449deb1479c1cd95388af 789 TIGRFAM TIGR02063 RNase_R: ribonuclease R 11 725 6.4E-243 T 09-03-2017 IPR011805 Ribonuclease R GO:0003723|GO:0004518 LS838_RS08075 c1bd171c8b9449deb1479c1cd95388af 789 ProSitePatterns PS01175 Ribonuclease II family signature. 563 587 - T 09-03-2017 IPR022966 Ribonuclease II/R, conserved site LS838_RS08075 c1bd171c8b9449deb1479c1cd95388af 789 SUPERFAMILY SSF50249 55 139 7.81E-16 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS08075 c1bd171c8b9449deb1479c1cd95388af 789 SUPERFAMILY SSF50249 645 723 6.31E-19 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS08075 c1bd171c8b9449deb1479c1cd95388af 789 SMART SM00955 264 596 5.7E-170 T 09-03-2017 LS838_RS08075 c1bd171c8b9449deb1479c1cd95388af 789 Gene3D G3DSA:2.40.50.140 645 730 3.7E-20 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS08075 c1bd171c8b9449deb1479c1cd95388af 789 Hamap MF_01895 Ribonuclease R [rnr]. 30 725 54.646 T 09-03-2017 IPR011805 Ribonuclease R GO:0003723|GO:0004518 LS838_RS08075 c1bd171c8b9449deb1479c1cd95388af 789 SUPERFAMILY SSF50249 130 238 9.43E-8 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS00110 f4dca33e330d621f05dc80cb1c0f9d36 174 SUPERFAMILY SSF69572 44 161 1.96E-34 T 09-03-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LS838_RS00110 f4dca33e330d621f05dc80cb1c0f9d36 174 Pfam PF00899 ThiF family 54 161 1.9E-27 T 09-03-2017 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 LS838_RS00110 f4dca33e330d621f05dc80cb1c0f9d36 174 Gene3D G3DSA:3.40.50.720 45 160 1.5E-31 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS05585 05ea6400a8e8a12a5182ef73ca9f59ac 303 Gene3D G3DSA:3.30.930.10 2 207 1.9E-91 T 09-03-2017 LS838_RS05585 05ea6400a8e8a12a5182ef73ca9f59ac 303 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 7 284 1.1E-135 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LS838_RS05585 05ea6400a8e8a12a5182ef73ca9f59ac 303 SUPERFAMILY SSF55681 6 284 3.15E-120 T 09-03-2017 LS838_RS05585 05ea6400a8e8a12a5182ef73ca9f59ac 303 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 5 285 52.557 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LS838_RS05585 05ea6400a8e8a12a5182ef73ca9f59ac 303 Gene3D G3DSA:1.20.58.180 209 290 1.4E-35 T 09-03-2017 LS838_RS05585 05ea6400a8e8a12a5182ef73ca9f59ac 303 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 6 292 6.4E-141 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LS838_RS05585 05ea6400a8e8a12a5182ef73ca9f59ac 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 59 74 2.0E-59 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LS838_RS05585 05ea6400a8e8a12a5182ef73ca9f59ac 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 80 100 2.0E-59 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LS838_RS05585 05ea6400a8e8a12a5182ef73ca9f59ac 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 137 157 2.0E-59 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LS838_RS05585 05ea6400a8e8a12a5182ef73ca9f59ac 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 160 175 2.0E-59 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LS838_RS05585 05ea6400a8e8a12a5182ef73ca9f59ac 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 111 135 2.0E-59 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LS838_RS05585 05ea6400a8e8a12a5182ef73ca9f59ac 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 245 261 2.0E-59 T 09-03-2017 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LS838_RS07560 283da8b360a5e41848249fb47f0a27ad 60 Gene3D G3DSA:3.30.70.270 8 52 8.1E-5 T 09-03-2017 LS838_RS09095 fc2cbbe070124eb8b0f24cf027614d18 399 SMART SM00388 166 233 9.3E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS09095 fc2cbbe070124eb8b0f24cf027614d18 399 SUPERFAMILY SSF55874 222 389 1.22E-38 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS09095 fc2cbbe070124eb8b0f24cf027614d18 399 Gene3D G3DSA:3.30.565.10 234 391 1.5E-39 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS09095 fc2cbbe070124eb8b0f24cf027614d18 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 345 6.1E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LS838_RS09095 fc2cbbe070124eb8b0f24cf027614d18 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 317 331 6.1E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LS838_RS09095 fc2cbbe070124eb8b0f24cf027614d18 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 370 6.1E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LS838_RS09095 fc2cbbe070124eb8b0f24cf027614d18 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 388 6.1E-12 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LS838_RS09095 fc2cbbe070124eb8b0f24cf027614d18 399 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 280 389 2.1E-20 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS09095 fc2cbbe070124eb8b0f24cf027614d18 399 SUPERFAMILY SSF47384 151 232 2.94E-17 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS09095 fc2cbbe070124eb8b0f24cf027614d18 399 SMART SM00387 279 391 8.9E-31 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS09095 fc2cbbe070124eb8b0f24cf027614d18 399 Pfam PF00512 His Kinase A (phospho-acceptor) domain 166 231 9.6E-14 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS09095 fc2cbbe070124eb8b0f24cf027614d18 399 Gene3D G3DSA:1.10.287.130 158 228 7.6E-17 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS03325 20bc3e6c1a08eb91497f8d427c87f9fc 204 SUPERFAMILY SSF102712 133 174 1.83E-5 T 09-03-2017 LS838_RS03325 20bc3e6c1a08eb91497f8d427c87f9fc 204 Pfam PF04002 RadC-like JAB domain 85 202 5.8E-41 T 09-03-2017 IPR025657 RadC-like JAB domain LS838_RS03325 20bc3e6c1a08eb91497f8d427c87f9fc 204 Gene3D G3DSA:3.40.140.10 84 203 7.3E-43 T 09-03-2017 LS838_RS03325 20bc3e6c1a08eb91497f8d427c87f9fc 204 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 153 158 - T 09-03-2017 IPR020891 Uncharacterised protein family UPF0758, conserved site LS838_RS07205 eee84948631e87ae3df8abbee36a1290 110 PIRSF PIRSF021439 1 103 9.6E-34 T 09-03-2017 IPR010377 Initiation control protein YabA GO:0006260 LS838_RS07205 eee84948631e87ae3df8abbee36a1290 110 Pfam PF06156 Protein of unknown function (DUF972) 4 98 2.4E-27 T 09-03-2017 IPR010377 Initiation control protein YabA GO:0006260 LS838_RS02355 e266b724673eee6a43baea6f154fe875 361 Gene3D G3DSA:2.40.30.40 77 165 1.0E-28 T 09-03-2017 IPR023367 Peptidase M42, domain 2 LS838_RS02355 e266b724673eee6a43baea6f154fe875 361 SUPERFAMILY SSF101821 72 183 7.48E-21 T 09-03-2017 LS838_RS02355 e266b724673eee6a43baea6f154fe875 361 PIRSF PIRSF001123 3 360 2.3E-88 T 09-03-2017 IPR008007 Peptidase M42 LS838_RS02355 e266b724673eee6a43baea6f154fe875 361 Pfam PF05343 M42 glutamyl aminopeptidase 47 341 1.7E-68 T 09-03-2017 IPR008007 Peptidase M42 LS838_RS02355 e266b724673eee6a43baea6f154fe875 361 SUPERFAMILY SSF53187 175 356 3.87E-52 T 09-03-2017 LS838_RS02355 e266b724673eee6a43baea6f154fe875 361 SUPERFAMILY SSF53187 7 82 3.87E-52 T 09-03-2017 LS838_RS02355 e266b724673eee6a43baea6f154fe875 361 Gene3D G3DSA:3.40.630.10 2 75 1.3E-65 T 09-03-2017 LS838_RS02355 e266b724673eee6a43baea6f154fe875 361 Gene3D G3DSA:3.40.630.10 172 360 1.3E-65 T 09-03-2017 LS838_RS09145 4bead70b0285e9ff6474b7fd50dc5758 239 Gene3D G3DSA:3.40.50.150 3 239 6.5E-78 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS09145 4bead70b0285e9ff6474b7fd50dc5758 239 Pfam PF02527 rRNA small subunit methyltransferase G 21 200 4.8E-50 T 09-03-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 LS838_RS09145 4bead70b0285e9ff6474b7fd50dc5758 239 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 217 4.2E-47 T 09-03-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 LS838_RS09145 4bead70b0285e9ff6474b7fd50dc5758 239 SUPERFAMILY SSF53335 1 239 1.8E-43 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS09145 4bead70b0285e9ff6474b7fd50dc5758 239 PIRSF PIRSF003078 2 222 1.2E-52 T 09-03-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 LS838_RS09145 4bead70b0285e9ff6474b7fd50dc5758 239 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 216 27.077 T 09-03-2017 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 LS838_RS03515 11ed5dd52e5ab6e0cfeb06e11bd8e61c 164 Pfam PF01467 Cytidylyltransferase-like 5 114 7.7E-15 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LS838_RS03515 11ed5dd52e5ab6e0cfeb06e11bd8e61c 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 159 4.7E-52 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 LS838_RS03515 11ed5dd52e5ab6e0cfeb06e11bd8e61c 164 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 11 70 0.003 T 09-03-2017 LS838_RS03515 11ed5dd52e5ab6e0cfeb06e11bd8e61c 164 SUPERFAMILY SSF52374 3 159 4.74E-36 T 09-03-2017 LS838_RS03515 11ed5dd52e5ab6e0cfeb06e11bd8e61c 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 161 31.152 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 LS838_RS03515 11ed5dd52e5ab6e0cfeb06e11bd8e61c 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 59 2.2E-16 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LS838_RS03515 11ed5dd52e5ab6e0cfeb06e11bd8e61c 164 Gene3D G3DSA:3.40.50.620 1 160 1.2E-45 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS03515 11ed5dd52e5ab6e0cfeb06e11bd8e61c 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 115 137 2.0E-26 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 LS838_RS03515 11ed5dd52e5ab6e0cfeb06e11bd8e61c 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 2.0E-26 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 LS838_RS03515 11ed5dd52e5ab6e0cfeb06e11bd8e61c 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 2.0E-26 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 LS838_RS03515 11ed5dd52e5ab6e0cfeb06e11bd8e61c 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 88 104 2.0E-26 T 09-03-2017 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 LS838_RS03580 136febc30c575cc84a5b109555326c42 535 SUPERFAMILY SSF53474 111 232 7.41E-18 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS03580 136febc30c575cc84a5b109555326c42 535 Pfam PF11187 Protein of unknown function (DUF2974) 79 299 2.0E-63 T 09-03-2017 IPR024499 Protein of unknown function DUF2974 LS838_RS03580 136febc30c575cc84a5b109555326c42 535 Pfam PF03729 Short repeat of unknown function (DUF308) 481 527 1.1E-4 T 09-03-2017 IPR005325 Protein of unknown function DUF308, membrane LS838_RS03580 136febc30c575cc84a5b109555326c42 535 Gene3D G3DSA:3.40.50.1820 111 244 1.7E-10 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS07510 187ab3e1802652ee66a4fdd744645a6e 539 PIRSF PIRSF002741 1 534 2.4E-89 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LS838_RS07510 187ab3e1802652ee66a4fdd744645a6e 539 Gene3D G3DSA:3.10.105.10 291 510 7.9E-45 T 09-03-2017 LS838_RS07510 187ab3e1802652ee66a4fdd744645a6e 539 SUPERFAMILY SSF53850 34 531 8.87E-113 T 09-03-2017 LS838_RS07510 187ab3e1802652ee66a4fdd744645a6e 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 463 9.0E-70 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain LS838_RS07510 187ab3e1802652ee66a4fdd744645a6e 539 Gene3D G3DSA:3.90.76.10 45 218 2.4E-46 T 09-03-2017 LS838_RS09815 a78da2b0ff9680c6a14a14b43a2369b0 459 SUPERFAMILY SSF53098 288 448 4.25E-31 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS09815 a78da2b0ff9680c6a14a14b43a2369b0 459 SUPERFAMILY SSF48295 39 116 1.62E-8 T 09-03-2017 IPR010921 Trp repressor/replication initiator GO:0043565 LS838_RS09815 a78da2b0ff9680c6a14a14b43a2369b0 459 Pfam PF00665 Integrase core domain 294 406 2.0E-23 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 LS838_RS09815 a78da2b0ff9680c6a14a14b43a2369b0 459 Pfam PF13276 HTH-like domain 211 267 5.7E-17 T 09-03-2017 IPR025948 HTH-like domain LS838_RS09815 a78da2b0ff9680c6a14a14b43a2369b0 459 Gene3D G3DSA:1.10.10.60 62 109 1.5E-5 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS09815 a78da2b0ff9680c6a14a14b43a2369b0 459 Gene3D G3DSA:1.10.10.60 155 173 1.5E-5 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS09815 a78da2b0ff9680c6a14a14b43a2369b0 459 Gene3D G3DSA:3.30.420.10 287 446 7.1E-26 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS06940 0f15bc261c5ec84bdcdfa7d5a8f70954 219 Pfam PF01569 PAP2 superfamily 95 209 1.4E-24 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LS838_RS06940 0f15bc261c5ec84bdcdfa7d5a8f70954 219 Gene3D G3DSA:1.20.144.10 34 210 2.6E-32 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LS838_RS06940 0f15bc261c5ec84bdcdfa7d5a8f70954 219 SUPERFAMILY SSF48317 20 212 6.93E-38 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LS838_RS06940 0f15bc261c5ec84bdcdfa7d5a8f70954 219 SMART SM00014 92 204 6.1E-18 T 09-03-2017 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase LS838_RS05645 5d1b23e2e014d7e8a28006786b4db5fd 436 SUPERFAMILY SSF51419 31 300 1.6E-77 T 09-03-2017 IPR029066 PLP-binding barrel LS838_RS05645 5d1b23e2e014d7e8a28006786b4db5fd 436 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 20 432 38.697 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LS838_RS05645 5d1b23e2e014d7e8a28006786b4db5fd 436 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 84 96 1.0E-14 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 LS838_RS05645 5d1b23e2e014d7e8a28006786b4db5fd 436 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 199 212 1.0E-14 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 LS838_RS05645 5d1b23e2e014d7e8a28006786b4db5fd 436 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 64 82 1.0E-14 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 LS838_RS05645 5d1b23e2e014d7e8a28006786b4db5fd 436 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 389 402 1.0E-14 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 LS838_RS05645 5d1b23e2e014d7e8a28006786b4db5fd 436 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 288 307 1.0E-14 T 09-03-2017 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 LS838_RS05645 5d1b23e2e014d7e8a28006786b4db5fd 436 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 43 298 4.1E-61 T 09-03-2017 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 LS838_RS05645 5d1b23e2e014d7e8a28006786b4db5fd 436 Gene3D G3DSA:2.40.37.10 280 432 6.4E-48 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 LS838_RS05645 5d1b23e2e014d7e8a28006786b4db5fd 436 PRINTS PR01181 Diaminopimelate decarboxylase signature 171 180 7.8E-24 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LS838_RS05645 5d1b23e2e014d7e8a28006786b4db5fd 436 PRINTS PR01181 Diaminopimelate decarboxylase signature 82 99 7.8E-24 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LS838_RS05645 5d1b23e2e014d7e8a28006786b4db5fd 436 PRINTS PR01181 Diaminopimelate decarboxylase signature 317 335 7.8E-24 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LS838_RS05645 5d1b23e2e014d7e8a28006786b4db5fd 436 PRINTS PR01181 Diaminopimelate decarboxylase signature 399 421 7.8E-24 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LS838_RS05645 5d1b23e2e014d7e8a28006786b4db5fd 436 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 308 408 3.8E-14 T 09-03-2017 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 LS838_RS05645 5d1b23e2e014d7e8a28006786b4db5fd 436 Gene3D G3DSA:3.20.20.10 41 279 2.3E-72 T 09-03-2017 IPR029066 PLP-binding barrel LS838_RS05645 5d1b23e2e014d7e8a28006786b4db5fd 436 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 10 431 1.9E-141 T 09-03-2017 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LS838_RS05645 5d1b23e2e014d7e8a28006786b4db5fd 436 SUPERFAMILY SSF50621 274 432 6.91E-49 T 09-03-2017 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 LS838_RS03930 4f909bb2da0e7dce5845bac2abccd279 74 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 4 63 1.3E-5 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LS838_RS03930 4f909bb2da0e7dce5845bac2abccd279 74 Gene3D G3DSA:1.10.260.40 3 64 3.6E-8 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS03930 4f909bb2da0e7dce5845bac2abccd279 74 SUPERFAMILY SSF47413 3 47 2.35E-5 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS00600 3963609559d7bd8b90d7486c3caa8346 306 Gene3D G3DSA:3.40.190.10 90 180 2.7E-17 T 09-03-2017 LS838_RS00600 3963609559d7bd8b90d7486c3caa8346 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.0E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS00600 3963609559d7bd8b90d7486c3caa8346 306 Pfam PF03466 LysR substrate binding domain 89 295 3.1E-33 T 09-03-2017 IPR005119 LysR, substrate-binding LS838_RS00600 3963609559d7bd8b90d7486c3caa8346 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS00600 3963609559d7bd8b90d7486c3caa8346 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS00600 3963609559d7bd8b90d7486c3caa8346 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS00600 3963609559d7bd8b90d7486c3caa8346 306 SUPERFAMILY SSF53850 90 299 1.84E-37 T 09-03-2017 LS838_RS00600 3963609559d7bd8b90d7486c3caa8346 306 Gene3D G3DSA:1.10.10.10 1 78 4.2E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS00600 3963609559d7bd8b90d7486c3caa8346 306 SUPERFAMILY SSF46785 1 81 2.45E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS00600 3963609559d7bd8b90d7486c3caa8346 306 Gene3D G3DSA:3.40.190.10 181 263 3.6E-24 T 09-03-2017 LS838_RS05680 d24357052b90158d54069017b9af7150 177 Pfam PF00227 Proteasome subunit 2 169 1.4E-21 T 09-03-2017 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5687128|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-983168 LS838_RS05680 d24357052b90158d54069017b9af7150 177 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 174 6.2E-71 T 09-03-2017 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 LS838_RS05680 d24357052b90158d54069017b9af7150 177 SUPERFAMILY SSF56235 1 174 1.4E-50 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LS838_RS05680 d24357052b90158d54069017b9af7150 177 Gene3D G3DSA:3.60.20.10 2 175 1.4E-67 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LS838_RS05800 f756c4726e49a63b09e5ce7865b8e166 246 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS05800 f756c4726e49a63b09e5ce7865b8e166 246 SUPERFAMILY SSF52540 4 239 3.04E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05800 f756c4726e49a63b09e5ce7865b8e166 246 Pfam PF00005 ABC transporter 20 169 3.3E-37 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS05800 f756c4726e49a63b09e5ce7865b8e166 246 SMART SM00382 29 218 7.1E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS05800 f756c4726e49a63b09e5ce7865b8e166 246 PIRSF PIRSF039085 1 245 4.0E-113 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LS838_RS05800 f756c4726e49a63b09e5ce7865b8e166 246 Gene3D G3DSA:3.40.50.300 3 240 2.8E-87 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08510 746c5ee577a3f026f291597db5208f47 659 SUPERFAMILY SSF49373 51 122 7.46E-15 T 09-03-2017 IPR008964 Invasin/intimin cell-adhesion fragments LS838_RS08510 746c5ee577a3f026f291597db5208f47 659 Pfam PF02368 Bacterial Ig-like domain (group 2) 52 112 7.1E-11 T 09-03-2017 IPR003343 Bacterial Ig-like, group 2 LS838_RS08510 746c5ee577a3f026f291597db5208f47 659 Gene3D G3DSA:2.60.40.1080 51 122 1.0E-15 T 09-03-2017 LS838_RS08510 746c5ee577a3f026f291597db5208f47 659 SMART SM00635 48 120 6.7E-6 T 09-03-2017 IPR003343 Bacterial Ig-like, group 2 LS838_RS08510 746c5ee577a3f026f291597db5208f47 659 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 408 644 5.4E-23 T 09-03-2017 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 LS838_RS08510 746c5ee577a3f026f291597db5208f47 659 SUPERFAMILY SSF51695 404 646 5.76E-40 T 09-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LS838_RS08510 746c5ee577a3f026f291597db5208f47 659 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 202 270 5.1E-7 T 09-03-2017 IPR013378 Listeria/Bacterioides repeat LS838_RS08510 746c5ee577a3f026f291597db5208f47 659 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 127 195 1.4E-4 T 09-03-2017 IPR013378 Listeria/Bacterioides repeat LS838_RS08510 746c5ee577a3f026f291597db5208f47 659 Gene3D G3DSA:3.20.20.190 398 651 2.5E-43 T 09-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LS838_RS00570 3128600bbf9f5bd6863343123d7e6a92 312 SUPERFAMILY SSF53067 4 308 2.95E-67 T 09-03-2017 LS838_RS00570 3128600bbf9f5bd6863343123d7e6a92 312 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 7 309 4.3E-90 T 09-03-2017 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 LS838_RS00570 3128600bbf9f5bd6863343123d7e6a92 312 Gene3D G3DSA:3.30.420.40 2 143 7.1E-41 T 09-03-2017 LS838_RS00570 3128600bbf9f5bd6863343123d7e6a92 312 Gene3D G3DSA:3.30.420.40 144 295 8.4E-53 T 09-03-2017 LS838_RS00570 3128600bbf9f5bd6863343123d7e6a92 312 ProSitePatterns PS01125 ROK family signature. 138 165 - T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 LS838_RS00570 3128600bbf9f5bd6863343123d7e6a92 312 Pfam PF00480 ROK family 6 309 2.2E-63 T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 LS838_RS03275 b4d598b35d6f83f97d67332131920ce7 434 Gene3D G3DSA:1.10.8.60 139 212 4.0E-10 T 09-03-2017 LS838_RS03275 b4d598b35d6f83f97d67332131920ce7 434 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 41 144 1.6E-15 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LS838_RS03275 b4d598b35d6f83f97d67332131920ce7 434 SUPERFAMILY SSF52540 2 211 1.39E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03275 b4d598b35d6f83f97d67332131920ce7 434 Gene3D G3DSA:3.40.50.300 2 138 2.3E-29 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03275 b4d598b35d6f83f97d67332131920ce7 434 Pfam PF16193 AAA C-terminal domain 171 257 2.7E-19 T 09-03-2017 IPR032423 AAA ATPase, C-terminal domain LS838_RS03275 b4d598b35d6f83f97d67332131920ce7 434 Gene3D G3DSA:1.10.3710.10 338 429 2.6E-26 T 09-03-2017 LS838_RS03275 b4d598b35d6f83f97d67332131920ce7 434 Pfam PF12002 MgsA AAA+ ATPase C terminal 258 423 1.9E-63 T 09-03-2017 IPR021886 MgsA AAA+ ATPase C-terminal LS838_RS03275 b4d598b35d6f83f97d67332131920ce7 434 SUPERFAMILY SSF48019 243 427 2.38E-68 T 09-03-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 LS838_RS03275 b4d598b35d6f83f97d67332131920ce7 434 Gene3D G3DSA:1.20.272.10 239 336 1.9E-38 T 09-03-2017 LS838_RS03275 b4d598b35d6f83f97d67332131920ce7 434 SMART SM00382 37 149 9.0E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS02165 4173b3bd60bc4567292b185a7946bf9c 100 SUPERFAMILY SSF141000 3 94 1.83E-27 T 09-03-2017 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 LS838_RS02165 4173b3bd60bc4567292b185a7946bf9c 100 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 96 23.535 T 09-03-2017 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 LS838_RS02165 4173b3bd60bc4567292b185a7946bf9c 100 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 96 7.7E-28 T 09-03-2017 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 LS838_RS02165 4173b3bd60bc4567292b185a7946bf9c 100 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 91 1.3E-20 T 09-03-2017 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 LS838_RS08710 9c4045044b97d389e43641c24e89b4d2 550 Pfam PF16657 Maltogenic Amylase, C-terminal domain 473 519 2.1E-7 T 09-03-2017 IPR032091 Maltogenic Amylase, C-terminal LS838_RS08710 9c4045044b97d389e43641c24e89b4d2 550 SUPERFAMILY SSF51445 6 469 2.72E-131 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS08710 9c4045044b97d389e43641c24e89b4d2 550 Gene3D G3DSA:3.20.20.80 173 471 8.3E-108 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS08710 9c4045044b97d389e43641c24e89b4d2 550 Gene3D G3DSA:3.20.20.80 3 101 8.3E-108 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS08710 9c4045044b97d389e43641c24e89b4d2 550 Gene3D G3DSA:3.90.400.10 102 169 8.2E-25 T 09-03-2017 LS838_RS08710 9c4045044b97d389e43641c24e89b4d2 550 SMART SM00642 11 414 6.4E-122 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LS838_RS08710 9c4045044b97d389e43641c24e89b4d2 550 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 5 549 4.6E-258 T 09-03-2017 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 LS838_RS08710 9c4045044b97d389e43641c24e89b4d2 550 Pfam PF00128 Alpha amylase, catalytic domain 26 372 6.2E-104 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LS838_RS08710 9c4045044b97d389e43641c24e89b4d2 550 SUPERFAMILY SSF51011 473 549 6.55E-17 T 09-03-2017 LS838_RS08710 9c4045044b97d389e43641c24e89b4d2 550 Gene3D G3DSA:2.60.40.1180 475 550 7.6E-20 T 09-03-2017 IPR013780 Glycosyl hydrolase, all-beta LS838_RS02920 1eff52b5f4011b3c6a80b3ba055f9e1a 295 Gene3D G3DSA:3.40.50.1000 200 287 8.9E-50 T 09-03-2017 IPR023214 HAD-like domain LS838_RS02920 1eff52b5f4011b3c6a80b3ba055f9e1a 295 Gene3D G3DSA:3.40.50.1000 1 72 8.9E-50 T 09-03-2017 IPR023214 HAD-like domain LS838_RS02920 1eff52b5f4011b3c6a80b3ba055f9e1a 295 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 282 3.5E-58 T 09-03-2017 IPR000150 Cof protein GO:0016787 LS838_RS02920 1eff52b5f4011b3c6a80b3ba055f9e1a 295 SUPERFAMILY SSF56784 1 286 3.6E-65 T 09-03-2017 IPR023214 HAD-like domain LS838_RS02920 1eff52b5f4011b3c6a80b3ba055f9e1a 295 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 255 1.5E-23 T 09-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 LS838_RS02920 1eff52b5f4011b3c6a80b3ba055f9e1a 295 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 09-03-2017 IPR000150 Cof protein GO:0016787 LS838_RS02920 1eff52b5f4011b3c6a80b3ba055f9e1a 295 Gene3D G3DSA:3.30.1240.10 82 199 1.2E-38 T 09-03-2017 LS838_RS02920 1eff52b5f4011b3c6a80b3ba055f9e1a 295 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 282 1.3E-62 T 09-03-2017 IPR023214 HAD-like domain LS838_RS02920 1eff52b5f4011b3c6a80b3ba055f9e1a 295 ProSitePatterns PS01229 Hypothetical cof family signature 2. 236 258 - T 09-03-2017 LS838_RS07775 04e61b4297fd30d336aa95fb030c0039 388 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 09-03-2017 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 LS838_RS07775 04e61b4297fd30d336aa95fb030c0039 388 PRINTS PR00473 Galactokinase signature 270 284 2.3E-25 T 09-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS07775 04e61b4297fd30d336aa95fb030c0039 388 PRINTS PR00473 Galactokinase signature 26 44 2.3E-25 T 09-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS07775 04e61b4297fd30d336aa95fb030c0039 388 PRINTS PR00473 Galactokinase signature 92 103 2.3E-25 T 09-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS07775 04e61b4297fd30d336aa95fb030c0039 388 PRINTS PR00473 Galactokinase signature 113 131 2.3E-25 T 09-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS07775 04e61b4297fd30d336aa95fb030c0039 388 Pfam PF10509 Galactokinase galactose-binding signature 9 57 1.1E-20 T 09-03-2017 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS07775 04e61b4297fd30d336aa95fb030c0039 388 Hamap MF_00246 Galactokinase [galK]. 24 387 44.937 T 09-03-2017 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS07775 04e61b4297fd30d336aa95fb030c0039 388 Pfam PF08544 GHMP kinases C terminal 286 365 3.4E-9 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain LS838_RS07775 04e61b4297fd30d336aa95fb030c0039 388 TIGRFAM TIGR00131 gal_kin: galactokinase 7 385 2.4E-105 T 09-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS07775 04e61b4297fd30d336aa95fb030c0039 388 PRINTS PR00959 Mevalonate kinase family signature 24 48 8.5E-36 T 09-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS07775 04e61b4297fd30d336aa95fb030c0039 388 PRINTS PR00959 Mevalonate kinase family signature 120 142 8.5E-36 T 09-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS07775 04e61b4297fd30d336aa95fb030c0039 388 PRINTS PR00959 Mevalonate kinase family signature 163 182 8.5E-36 T 09-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS07775 04e61b4297fd30d336aa95fb030c0039 388 PRINTS PR00959 Mevalonate kinase family signature 334 351 8.5E-36 T 09-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS07775 04e61b4297fd30d336aa95fb030c0039 388 PIRSF PIRSF000530 2 388 1.2E-111 T 09-03-2017 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS07775 04e61b4297fd30d336aa95fb030c0039 388 Gene3D G3DSA:3.30.230.10 6 210 4.2E-67 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LS838_RS07775 04e61b4297fd30d336aa95fb030c0039 388 ProSitePatterns PS00106 Galactokinase signature. 26 37 - T 09-03-2017 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS07775 04e61b4297fd30d336aa95fb030c0039 388 Gene3D G3DSA:3.30.70.890 211 386 1.2E-50 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain LS838_RS07775 04e61b4297fd30d336aa95fb030c0039 388 SUPERFAMILY SSF55060 206 386 5.04E-48 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain LS838_RS07775 04e61b4297fd30d336aa95fb030c0039 388 SUPERFAMILY SSF54211 6 204 3.19E-56 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LS838_RS07775 04e61b4297fd30d336aa95fb030c0039 388 Pfam PF00288 GHMP kinases N terminal domain 116 178 3.3E-10 T 09-03-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 LS838_RS07085 3b6c470a4a608f698be1f2c110574beb 786 SMART SM00463 708 786 6.5E-20 T 09-03-2017 IPR002625 Smr domain LS838_RS07085 3b6c470a4a608f698be1f2c110574beb 786 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 410 426 - T 09-03-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LS838_RS07085 3b6c470a4a608f698be1f2c110574beb 786 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 786 1.1E-214 T 09-03-2017 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 LS838_RS07085 3b6c470a4a608f698be1f2c110574beb 786 Gene3D G3DSA:3.40.50.300 293 515 9.1E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07085 3b6c470a4a608f698be1f2c110574beb 786 Pfam PF00488 MutS domain V 331 512 7.7E-35 T 09-03-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LS838_RS07085 3b6c470a4a608f698be1f2c110574beb 786 SUPERFAMILY SSF48334 34 288 1.83E-20 T 09-03-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LS838_RS07085 3b6c470a4a608f698be1f2c110574beb 786 Pfam PF01713 Smr domain 711 786 2.1E-19 T 09-03-2017 IPR002625 Smr domain LS838_RS07085 3b6c470a4a608f698be1f2c110574beb 786 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 785 20.026 T 09-03-2017 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 LS838_RS07085 3b6c470a4a608f698be1f2c110574beb 786 SUPERFAMILY SSF52540 293 513 3.58E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07085 3b6c470a4a608f698be1f2c110574beb 786 SMART SM00534 328 513 4.7E-71 T 09-03-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LS838_RS07085 3b6c470a4a608f698be1f2c110574beb 786 PIRSF PIRSF005814 1 786 6.9E-237 T 09-03-2017 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 LS838_RS07085 3b6c470a4a608f698be1f2c110574beb 786 SUPERFAMILY SSF160443 710 786 1.57E-10 T 09-03-2017 IPR002625 Smr domain LS838_RS07085 3b6c470a4a608f698be1f2c110574beb 786 SMART SM00533 9 315 6.1E-6 T 09-03-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LS838_RS06435 5334d9f25d5d0b64031588183e47c538 712 SMART SM00493 2 129 1.3E-20 T 09-03-2017 IPR006171 Toprim domain LS838_RS06435 5334d9f25d5d0b64031588183e47c538 712 Pfam PF13342 C-terminal repeat of topoisomerase 653 712 2.6E-15 T 09-03-2017 IPR025589 Topoisomerase C-terminal repeat LS838_RS06435 5334d9f25d5d0b64031588183e47c538 712 Gene3D G3DSA:1.10.460.10 469 603 9.0E-51 T 09-03-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LS838_RS06435 5334d9f25d5d0b64031588183e47c538 712 Gene3D G3DSA:1.10.460.10 163 221 9.0E-51 T 09-03-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LS838_RS06435 5334d9f25d5d0b64031588183e47c538 712 Gene3D G3DSA:3.40.50.140 3 156 4.2E-43 T 09-03-2017 IPR006171 Toprim domain LS838_RS06435 5334d9f25d5d0b64031588183e47c538 712 SMART SM00437 277 553 4.6E-78 T 09-03-2017 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 LS838_RS06435 5334d9f25d5d0b64031588183e47c538 712 Pfam PF01751 Toprim domain 4 140 8.6E-18 T 09-03-2017 IPR006171 Toprim domain LS838_RS06435 5334d9f25d5d0b64031588183e47c538 712 SMART SM00436 132 227 6.5E-38 T 09-03-2017 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 LS838_RS06435 5334d9f25d5d0b64031588183e47c538 712 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 703 3.0E-180 T 09-03-2017 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 LS838_RS06435 5334d9f25d5d0b64031588183e47c538 712 Pfam PF01131 DNA topoisomerase 163 589 6.7E-103 T 09-03-2017 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 LS838_RS06435 5334d9f25d5d0b64031588183e47c538 712 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 314 328 - T 09-03-2017 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 LS838_RS06435 5334d9f25d5d0b64031588183e47c538 712 SUPERFAMILY SSF56712 3 602 1.83E-163 T 09-03-2017 IPR023405 DNA topoisomerase, type IA, core domain LS838_RS06435 5334d9f25d5d0b64031588183e47c538 712 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 197 215 1.4E-22 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LS838_RS06435 5334d9f25d5d0b64031588183e47c538 712 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 404 420 1.4E-22 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LS838_RS06435 5334d9f25d5d0b64031588183e47c538 712 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 319 328 1.4E-22 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LS838_RS06435 5334d9f25d5d0b64031588183e47c538 712 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 103 116 1.4E-22 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LS838_RS06435 5334d9f25d5d0b64031588183e47c538 712 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 516 530 1.4E-22 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LS838_RS06435 5334d9f25d5d0b64031588183e47c538 712 Gene3D G3DSA:1.10.290.10 288 417 1.7E-29 T 09-03-2017 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 LS838_RS09555 de945353d129317f651b0a0dfab01e08 129 Gene3D G3DSA:2.60.300.12 1 128 3.4E-45 T 09-03-2017 IPR000361 FeS cluster biogenesis LS838_RS09555 de945353d129317f651b0a0dfab01e08 129 SUPERFAMILY SSF89360 3 110 1.14E-25 T 09-03-2017 IPR000361 FeS cluster biogenesis LS838_RS09555 de945353d129317f651b0a0dfab01e08 129 Pfam PF01521 Iron-sulphur cluster biosynthesis 3 111 2.0E-22 T 09-03-2017 IPR000361 FeS cluster biogenesis LS838_RS03000 08e2504671a40958e2442d787c47ba21 124 Gene3D G3DSA:2.60.40.420 34 123 2.9E-6 T 09-03-2017 IPR008972 Cupredoxin LS838_RS03000 08e2504671a40958e2442d787c47ba21 124 Pfam PF13473 Cupredoxin-like domain 15 123 6.0E-23 T 09-03-2017 IPR028096 EfeO-type cupredoxin-like domain LS838_RS03000 08e2504671a40958e2442d787c47ba21 124 SUPERFAMILY SSF49503 15 123 2.43E-11 T 09-03-2017 IPR008972 Cupredoxin LS838_RS07580 229b7515c815c4152f356eb2d2982383 572 Gene3D G3DSA:3.40.50.300 3 238 1.8E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07580 229b7515c815c4152f356eb2d2982383 572 Gene3D G3DSA:3.40.50.300 299 530 1.3E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07580 229b7515c815c4152f356eb2d2982383 572 Pfam PF00005 ABC transporter 319 464 5.3E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS07580 229b7515c815c4152f356eb2d2982383 572 Pfam PF00005 ABC transporter 22 172 9.2E-27 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS07580 229b7515c815c4152f356eb2d2982383 572 SUPERFAMILY SSF52540 291 530 3.7E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07580 229b7515c815c4152f356eb2d2982383 572 SMART SM00382 328 512 7.5E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS07580 229b7515c815c4152f356eb2d2982383 572 SMART SM00382 31 223 5.8E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS07580 229b7515c815c4152f356eb2d2982383 572 SUPERFAMILY SSF52540 4 236 1.0E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07580 229b7515c815c4152f356eb2d2982383 572 Pfam PF12558 ATP-binding cassette cobalt transporter 237 309 1.3E-16 T 09-03-2017 IPR022216 ABC cobalt transporter GO:0016820 LS838_RS07580 229b7515c815c4152f356eb2d2982383 572 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS07580 229b7515c815c4152f356eb2d2982383 572 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS06155 f6a15f83fa31e6cdefa9548cb8461259 679 Gene3D G3DSA:1.10.150.20 10 37 3.7E-5 T 09-03-2017 LS838_RS06155 f6a15f83fa31e6cdefa9548cb8461259 679 SMART SM00490 488 572 3.7E-22 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS06155 f6a15f83fa31e6cdefa9548cb8461259 679 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 647 1.7E-224 T 09-03-2017 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 LS838_RS06155 f6a15f83fa31e6cdefa9548cb8461259 679 SUPERFAMILY SSF52540 368 628 1.59E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06155 f6a15f83fa31e6cdefa9548cb8461259 679 Gene3D G3DSA:2.40.50.140 51 122 1.0E-13 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS06155 f6a15f83fa31e6cdefa9548cb8461259 679 SUPERFAMILY SSF50249 9 167 1.25E-25 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS06155 f6a15f83fa31e6cdefa9548cb8461259 679 Pfam PF00270 DEAD/DEAH box helicase 259 414 3.4E-18 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LS838_RS06155 f6a15f83fa31e6cdefa9548cb8461259 679 Pfam PF17191 RecG wedge domain 13 165 3.1E-13 T 09-03-2017 IPR033454 RecG, wedge domain LS838_RS06155 f6a15f83fa31e6cdefa9548cb8461259 679 SUPERFAMILY SSF52540 176 436 2.53E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06155 f6a15f83fa31e6cdefa9548cb8461259 679 Pfam PF00271 Helicase conserved C-terminal domain 454 571 1.4E-19 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS06155 f6a15f83fa31e6cdefa9548cb8461259 679 Gene3D G3DSA:3.40.50.300 439 619 1.2E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06155 f6a15f83fa31e6cdefa9548cb8461259 679 SMART SM00487 253 443 5.4E-31 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LS838_RS06155 f6a15f83fa31e6cdefa9548cb8461259 679 Gene3D G3DSA:3.40.50.300 246 438 1.6E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09135 6ed0ab7fb1322edcd4014655f7c4f869 259 Pfam PF13614 AAA domain 3 177 8.2E-68 T 09-03-2017 IPR025669 AAA domain LS838_RS09135 6ed0ab7fb1322edcd4014655f7c4f869 259 Gene3D G3DSA:3.40.50.300 4 254 8.3E-76 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09135 6ed0ab7fb1322edcd4014655f7c4f869 259 SUPERFAMILY SSF52540 1 253 5.51E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07125 b48adcc86b1ebdf60094cb30051d5870 482 SUPERFAMILY SSF51735 5 191 4.92E-62 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS07125 b48adcc86b1ebdf60094cb30051d5870 482 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 220 237 2.6E-41 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LS838_RS07125 b48adcc86b1ebdf60094cb30051d5870 482 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 238 254 2.6E-41 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LS838_RS07125 b48adcc86b1ebdf60094cb30051d5870 482 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 325 351 2.6E-41 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LS838_RS07125 b48adcc86b1ebdf60094cb30051d5870 482 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 144 157 2.6E-41 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LS838_RS07125 b48adcc86b1ebdf60094cb30051d5870 482 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 168 196 2.6E-41 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LS838_RS07125 b48adcc86b1ebdf60094cb30051d5870 482 Gene3D G3DSA:3.40.50.720 6 187 3.6E-70 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS07125 b48adcc86b1ebdf60094cb30051d5870 482 Gene3D G3DSA:3.30.360.10 188 472 2.1E-88 T 09-03-2017 LS838_RS07125 b48adcc86b1ebdf60094cb30051d5870 482 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 178 184 - T 09-03-2017 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LS838_RS07125 b48adcc86b1ebdf60094cb30051d5870 482 PIRSF PIRSF000110 1 482 1.2E-161 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LS838_RS07125 b48adcc86b1ebdf60094cb30051d5870 482 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 191 473 1.2E-82 T 09-03-2017 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LS838_RS07125 b48adcc86b1ebdf60094cb30051d5870 482 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 6 470 9.9E-144 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LS838_RS07125 b48adcc86b1ebdf60094cb30051d5870 482 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 9 188 8.0E-61 T 09-03-2017 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LS838_RS07125 b48adcc86b1ebdf60094cb30051d5870 482 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 5 481 68.805 T 09-03-2017 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 LS838_RS07125 b48adcc86b1ebdf60094cb30051d5870 482 SUPERFAMILY SSF55347 183 477 1.8E-84 T 09-03-2017 LS838_RS06800 11c6f87ebc09b290ef59fa4d0cec0561 309 Gene3D G3DSA:3.20.20.70 4 303 2.2E-90 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LS838_RS06800 11c6f87ebc09b290ef59fa4d0cec0561 309 SUPERFAMILY SSF51395 4 303 6.96E-85 T 09-03-2017 LS838_RS06800 11c6f87ebc09b290ef59fa4d0cec0561 309 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 7 304 37.656 T 09-03-2017 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 LS838_RS06800 11c6f87ebc09b290ef59fa4d0cec0561 309 Pfam PF01180 Dihydroorotate dehydrogenase 7 289 1.8E-75 T 09-03-2017 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 LS838_RS06800 11c6f87ebc09b290ef59fa4d0cec0561 309 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 242 262 - T 09-03-2017 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 LS838_RS06800 11c6f87ebc09b290ef59fa4d0cec0561 309 PIRSF PIRSF000164 1 306 1.5E-78 T 09-03-2017 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 LS838_RS06800 11c6f87ebc09b290ef59fa4d0cec0561 309 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 7 302 2.7E-100 T 09-03-2017 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 LS838_RS01960 855661734b1a27f2da98084df8c03bf6 129 Gene3D G3DSA:3.30.420.80 6 129 1.7E-55 T 09-03-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LS838_RS01960 855661734b1a27f2da98084df8c03bf6 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 4 129 33.558 T 09-03-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LS838_RS01960 855661734b1a27f2da98084df8c03bf6 129 SUPERFAMILY SSF53137 14 129 2.35E-48 T 09-03-2017 LS838_RS01960 855661734b1a27f2da98084df8c03bf6 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 126 2.2E-57 T 09-03-2017 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01960 855661734b1a27f2da98084df8c03bf6 129 Pfam PF00411 Ribosomal protein S11 19 128 6.2E-52 T 09-03-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LS838_RS01960 855661734b1a27f2da98084df8c03bf6 129 PIRSF PIRSF002131 1 129 5.1E-53 T 09-03-2017 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 LS838_RS01960 855661734b1a27f2da98084df8c03bf6 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 09-03-2017 IPR018102 Ribosomal S11, conserved site LS838_RS02555 069adfcd4d653e81676cc04167c2989c 275 SUPERFAMILY SSF55920 1 255 1.03E-69 T 09-03-2017 IPR000994 Peptidase M24, structural domain LS838_RS02555 069adfcd4d653e81676cc04167c2989c 275 Pfam PF00557 Metallopeptidase family M24 12 248 5.4E-46 T 09-03-2017 IPR000994 Peptidase M24, structural domain LS838_RS02555 069adfcd4d653e81676cc04167c2989c 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 192 204 1.8E-16 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase LS838_RS02555 069adfcd4d653e81676cc04167c2989c 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 1.8E-16 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase LS838_RS02555 069adfcd4d653e81676cc04167c2989c 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 161 173 1.8E-16 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase LS838_RS02555 069adfcd4d653e81676cc04167c2989c 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 90 106 1.8E-16 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase LS838_RS02555 069adfcd4d653e81676cc04167c2989c 275 Gene3D G3DSA:3.90.230.10 2 258 2.0E-73 T 09-03-2017 IPR000994 Peptidase M24, structural domain LS838_RS02555 069adfcd4d653e81676cc04167c2989c 275 Hamap MF_01974 Methionine aminopeptidase [map]. 2 257 35.214 T 09-03-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 LS838_RS02555 069adfcd4d653e81676cc04167c2989c 275 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 256 1.7E-74 T 09-03-2017 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 LS838_RS06230 f774e45f04df059540ff076f88f8fc8e 73 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 3 61 2.7E-14 T 09-03-2017 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS06230 f774e45f04df059540ff076f88f8fc8e 73 Pfam PF01192 RNA polymerase Rpb6 10 63 5.5E-14 T 09-03-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 LS838_RS06230 f774e45f04df059540ff076f88f8fc8e 73 SUPERFAMILY SSF63562 3 68 5.93E-22 T 09-03-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 LS838_RS06230 f774e45f04df059540ff076f88f8fc8e 73 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 3 64 15.602 T 09-03-2017 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS06230 f774e45f04df059540ff076f88f8fc8e 73 SMART SM01409 10 63 2.2E-14 T 09-03-2017 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 LS838_RS06230 f774e45f04df059540ff076f88f8fc8e 73 Gene3D G3DSA:3.90.940.10 3 70 1.4E-23 T 09-03-2017 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 LS838_RS04565 eed7df883ce0a2109c93c7dd1143d253 410 SUPERFAMILY SSF56300 14 304 6.51E-44 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like LS838_RS04565 eed7df883ce0a2109c93c7dd1143d253 410 Pfam PF00149 Calcineurin-like phosphoesterase 14 255 2.7E-14 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LS838_RS04565 eed7df883ce0a2109c93c7dd1143d253 410 Gene3D G3DSA:3.60.21.10 12 294 8.3E-40 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like LS838_RS01455 df3df0bf8bee52a3482d37f8d625f61c 158 SUPERFAMILY SSF81330 30 137 1.44E-30 T 09-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LS838_RS01455 df3df0bf8bee52a3482d37f8d625f61c 158 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 30 43 - T 09-03-2017 IPR019823 Large-conductance mechanosensitive channel, conserved site LS838_RS01455 df3df0bf8bee52a3482d37f8d625f61c 158 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 20 128 2.2E-33 T 09-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LS838_RS01455 df3df0bf8bee52a3482d37f8d625f61c 158 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 20 137 1.3E-37 T 09-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LS838_RS01455 df3df0bf8bee52a3482d37f8d625f61c 158 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 101 1.3E-8 T 09-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LS838_RS01455 df3df0bf8bee52a3482d37f8d625f61c 158 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 23 37 1.3E-8 T 09-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LS838_RS01455 df3df0bf8bee52a3482d37f8d625f61c 158 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 102 111 1.3E-8 T 09-03-2017 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 LS838_RS06115 2fefea8687657a195b6ecec8e217f487 592 Gene3D G3DSA:3.40.190.10 239 352 6.1E-26 T 09-03-2017 LS838_RS06115 2fefea8687657a195b6ecec8e217f487 592 PIRSF PIRSF002741 1 588 4.3E-58 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LS838_RS06115 2fefea8687657a195b6ecec8e217f487 592 Gene3D G3DSA:3.10.105.10 353 556 2.5E-32 T 09-03-2017 LS838_RS06115 2fefea8687657a195b6ecec8e217f487 592 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 105 506 1.3E-65 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain LS838_RS06115 2fefea8687657a195b6ecec8e217f487 592 Gene3D G3DSA:3.90.76.10 75 238 1.9E-22 T 09-03-2017 LS838_RS06115 2fefea8687657a195b6ecec8e217f487 592 SUPERFAMILY SSF53850 51 587 1.65E-86 T 09-03-2017 LS838_RS01135 6f9a534ff486ff5f3ea46087128300cb 185 Gene3D G3DSA:1.10.3910.10 112 185 1.1E-28 T 09-03-2017 IPR015077 Domain of unknown function DUF1858 LS838_RS01135 6f9a534ff486ff5f3ea46087128300cb 185 Pfam PF08984 Domain of unknown function (DUF1858) 115 172 6.7E-14 T 09-03-2017 IPR015077 Domain of unknown function DUF1858 LS838_RS01135 6f9a534ff486ff5f3ea46087128300cb 185 SUPERFAMILY SSF140683 113 183 1.06E-16 T 09-03-2017 LS838_RS01135 6f9a534ff486ff5f3ea46087128300cb 185 SUPERFAMILY SSF117916 9 103 2.98E-28 T 09-03-2017 LS838_RS01135 6f9a534ff486ff5f3ea46087128300cb 185 Pfam PF01883 Domain of unknown function DUF59 11 80 1.9E-15 T 09-03-2017 IPR002744 Domain of unknown function DUF59 LS838_RS04925 e5747dd674682ef71ce1435314da06ec 575 Gene3D G3DSA:1.20.1560.10 2 319 2.5E-47 T 09-03-2017 LS838_RS04925 e5747dd674682ef71ce1435314da06ec 575 Pfam PF00664 ABC transporter transmembrane region 15 282 1.3E-30 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS04925 e5747dd674682ef71ce1435314da06ec 575 SUPERFAMILY SSF90123 3 314 3.66E-57 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS04925 e5747dd674682ef71ce1435314da06ec 575 SMART SM00382 356 542 1.6E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS04925 e5747dd674682ef71ce1435314da06ec 575 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS04925 e5747dd674682ef71ce1435314da06ec 575 SUPERFAMILY SSF52540 324 566 9.1E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04925 e5747dd674682ef71ce1435314da06ec 575 Gene3D G3DSA:3.40.50.300 329 557 1.6E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04925 e5747dd674682ef71ce1435314da06ec 575 Pfam PF00005 ABC transporter 347 496 1.9E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS03355 877c47afd1de7f5ca3dc5418ec0cfccc 143 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 9.1E-23 T 09-03-2017 IPR020603 MraZ domain LS838_RS03355 877c47afd1de7f5ca3dc5418ec0cfccc 143 Pfam PF02381 MraZ protein, putative antitoxin-like 72 138 2.5E-20 T 09-03-2017 IPR020603 MraZ domain LS838_RS03355 877c47afd1de7f5ca3dc5418ec0cfccc 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 57.672 T 09-03-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 LS838_RS03355 877c47afd1de7f5ca3dc5418ec0cfccc 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 143 1.8E-51 T 09-03-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 LS838_RS03355 877c47afd1de7f5ca3dc5418ec0cfccc 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 131 4.0E-59 T 09-03-2017 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 LS838_RS03355 877c47afd1de7f5ca3dc5418ec0cfccc 143 SUPERFAMILY SSF89447 1 136 3.56E-51 T 09-03-2017 LS838_RS09580 ec1c131608893eb5b783255fff7f03f6 500 Gene3D G3DSA:3.40.50.980 3 153 4.1E-26 T 09-03-2017 LS838_RS09580 ec1c131608893eb5b783255fff7f03f6 500 SUPERFAMILY SSF56801 4 497 5.49E-104 T 09-03-2017 LS838_RS09580 ec1c131608893eb5b783255fff7f03f6 500 TIGRFAM TIGR01734 D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1 3 499 4.8E-186 T 09-03-2017 IPR010072 D-alanine--poly(phosphoribitol) ligase subunit 1 GO:0005524|GO:0047473|GO:0070395 KEGG: 00473+6.1.1.13 LS838_RS09580 ec1c131608893eb5b783255fff7f03f6 500 ProSitePatterns PS00455 Putative AMP-binding domain signature. 144 155 - T 09-03-2017 IPR020845 AMP-binding, conserved site LS838_RS09580 ec1c131608893eb5b783255fff7f03f6 500 Gene3D G3DSA:3.30.300.30 392 497 1.7E-21 T 09-03-2017 LS838_RS09580 ec1c131608893eb5b783255fff7f03f6 500 Gene3D G3DSA:3.40.50.980 154 306 4.8E-39 T 09-03-2017 LS838_RS09580 ec1c131608893eb5b783255fff7f03f6 500 Gene3D G3DSA:2.30.38.10 316 382 2.9E-13 T 09-03-2017 LS838_RS09580 ec1c131608893eb5b783255fff7f03f6 500 Pfam PF00501 AMP-binding enzyme 9 396 3.3E-73 T 09-03-2017 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 LS838_RS09580 ec1c131608893eb5b783255fff7f03f6 500 Hamap MF_00593 D-alanine--poly(phosphoribitol) ligase subunit 1 [dltA]. 1 499 230.423 T 09-03-2017 IPR010072 D-alanine--poly(phosphoribitol) ligase subunit 1 GO:0005524|GO:0047473|GO:0070395 KEGG: 00473+6.1.1.13 LS838_RS03180 09127378171b3a5dec323ee38cf0c52a 361 SMART SM00937 65 180 4.8E-56 T 09-03-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 LS838_RS03180 09127378171b3a5dec323ee38cf0c52a 361 Pfam PF03462 PCRF domain 12 205 3.3E-70 T 09-03-2017 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 LS838_RS03180 09127378171b3a5dec323ee38cf0c52a 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 359 1.4E-158 T 09-03-2017 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 LS838_RS03180 09127378171b3a5dec323ee38cf0c52a 361 Pfam PF00472 RF-1 domain 213 322 3.7E-41 T 09-03-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LS838_RS03180 09127378171b3a5dec323ee38cf0c52a 361 Gene3D G3DSA:3.30.160.20 212 289 3.4E-35 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain LS838_RS03180 09127378171b3a5dec323ee38cf0c52a 361 SUPERFAMILY SSF75620 11 354 7.19E-129 T 09-03-2017 LS838_RS03180 09127378171b3a5dec323ee38cf0c52a 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 4 358 39.209 T 09-03-2017 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 LS838_RS03180 09127378171b3a5dec323ee38cf0c52a 361 Gene3D G3DSA:1.20.58.410 7 95 1.8E-19 T 09-03-2017 LS838_RS03180 09127378171b3a5dec323ee38cf0c52a 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 229 245 - T 09-03-2017 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 Pfam PF00562 RNA polymerase Rpb2, domain 6 682 1067 3.6E-161 T 09-03-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 Gene3D G3DSA:3.90.1110.10 382 406 2.4E-62 T 09-03-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 Gene3D G3DSA:3.90.1110.10 143 301 2.4E-62 T 09-03-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 ProSitePatterns PS01166 RNA polymerases beta chain signature. 920 932 - T 09-03-2017 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 SUPERFAMILY SSF64484 15 292 0.0 T 09-03-2017 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 SUPERFAMILY SSF64484 384 1153 0.0 T 09-03-2017 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 Gene3D G3DSA:3.90.1100.10 623 677 5.9E-142 T 09-03-2017 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 Gene3D G3DSA:3.90.1100.10 407 553 5.9E-142 T 09-03-2017 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 Gene3D G3DSA:3.90.1100.10 22 141 5.9E-142 T 09-03-2017 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 Pfam PF04561 RNA polymerase Rpb2, domain 2 378 416 1.7E-7 T 09-03-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 Pfam PF04561 RNA polymerase Rpb2, domain 2 141 289 5.7E-21 T 09-03-2017 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 Pfam PF04563 RNA polymerase beta subunit 30 460 6.8E-27 T 09-03-2017 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 Gene3D G3DSA:2.40.50.100 680 750 5.0E-26 T 09-03-2017 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 Pfam PF04565 RNA polymerase Rpb2, domain 3 475 542 2.3E-28 T 09-03-2017 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 Gene3D G3DSA:2.40.270.10 751 777 2.3E-73 T 09-03-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 Gene3D G3DSA:2.40.270.10 917 1045 2.3E-73 T 09-03-2017 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 16 1145 12.195 T 09-03-2017 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 Gene3D G3DSA:2.40.50.150 784 916 3.1E-58 T 09-03-2017 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 226 894 1.1E-287 T 09-03-2017 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 Gene3D G3DSA:2.30.150.10 554 619 2.6E-27 T 09-03-2017 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 Pfam PF10385 RNA polymerase beta subunit external 1 domain 553 619 4.9E-25 T 09-03-2017 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01795 c8718c0cd59f2a24f7a5f67f2905cc84 1229 Pfam PF04560 RNA polymerase Rpb2, domain 7 1069 1143 1.4E-26 T 09-03-2017 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS09090 87b64fb3c8d49b482af51fc32b66bc4d 516 Gene3D G3DSA:3.40.1390.10 20 103 1.8E-7 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 LS838_RS09090 87b64fb3c8d49b482af51fc32b66bc4d 516 SUPERFAMILY SSF63418 27 105 1.01E-11 T 09-03-2017 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 LS838_RS09090 87b64fb3c8d49b482af51fc32b66bc4d 516 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 30 505 1.1E-87 T 09-03-2017 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 LS838_RS09090 87b64fb3c8d49b482af51fc32b66bc4d 516 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 12 511 27.498 T 09-03-2017 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 LS838_RS09090 87b64fb3c8d49b482af51fc32b66bc4d 516 Gene3D G3DSA:3.40.1190.10 105 359 4.2E-49 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LS838_RS09090 87b64fb3c8d49b482af51fc32b66bc4d 516 Pfam PF08245 Mur ligase middle domain 115 335 1.1E-27 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LS838_RS09090 87b64fb3c8d49b482af51fc32b66bc4d 516 Pfam PF02875 Mur ligase family, glutamate ligase domain 356 439 1.6E-13 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LS838_RS09090 87b64fb3c8d49b482af51fc32b66bc4d 516 Gene3D G3DSA:3.90.190.20 360 500 1.7E-36 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LS838_RS09090 87b64fb3c8d49b482af51fc32b66bc4d 516 SUPERFAMILY SSF53623 105 354 1.44E-40 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LS838_RS09090 87b64fb3c8d49b482af51fc32b66bc4d 516 SUPERFAMILY SSF53244 356 509 6.02E-35 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LS838_RS06355 e96d0c98659d70e304e8769890f334d8 513 SUPERFAMILY SSF53927 208 513 6.72E-122 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 LS838_RS06355 e96d0c98659d70e304e8769890f334d8 513 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2 513 1.4E-208 T 09-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LS838_RS06355 e96d0c98659d70e304e8769890f334d8 513 PIRSF PIRSF000414 1 513 1.6E-205 T 09-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LS838_RS06355 e96d0c98659d70e304e8769890f334d8 513 Gene3D G3DSA:3.40.50.1380 2 185 1.1E-80 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain LS838_RS06355 e96d0c98659d70e304e8769890f334d8 513 Pfam PF01808 AICARFT/IMPCHase bienzyme 133 445 4.0E-116 T 09-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LS838_RS06355 e96d0c98659d70e304e8769890f334d8 513 Pfam PF02142 MGS-like domain 14 127 2.5E-27 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain LS838_RS06355 e96d0c98659d70e304e8769890f334d8 513 Gene3D G3DSA:3.40.140.20 363 503 2.6E-53 T 09-03-2017 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LS838_RS06355 e96d0c98659d70e304e8769890f334d8 513 Gene3D G3DSA:3.40.140.20 238 357 9.4E-48 T 09-03-2017 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LS838_RS06355 e96d0c98659d70e304e8769890f334d8 513 SUPERFAMILY SSF52335 2 192 1.96E-67 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain LS838_RS06355 e96d0c98659d70e304e8769890f334d8 513 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 1 513 42.97 T 09-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LS838_RS06355 e96d0c98659d70e304e8769890f334d8 513 SMART SM00851 13 128 9.4E-54 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain LS838_RS06355 e96d0c98659d70e304e8769890f334d8 513 SMART SM00798 133 447 7.5E-186 T 09-03-2017 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LS838_RS09620 c0ece4e16bf5ff8de5be7a4167eeb483 392 Pfam PF12323 Helix-turn-helix domain 15 55 1.9E-10 T 09-03-2017 IPR021027 Transposase, putative, helix-turn-helix domain LS838_RS09620 c0ece4e16bf5ff8de5be7a4167eeb483 392 Pfam PF01385 Probable transposase 180 304 1.4E-16 T 09-03-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 LS838_RS09620 c0ece4e16bf5ff8de5be7a4167eeb483 392 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 272 345 8.1E-22 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS09620 c0ece4e16bf5ff8de5be7a4167eeb483 392 Pfam PF07282 Putative transposase DNA-binding domain 318 386 1.5E-26 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS01355 8f079f12651a154a32780bae9bae39c8 429 Gene3D G3DSA:1.10.300.10 100 194 7.2E-37 T 09-03-2017 LS838_RS01355 8f079f12651a154a32780bae9bae39c8 429 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 429 197.472 T 09-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 LS838_RS01355 8f079f12651a154a32780bae9bae39c8 429 Gene3D G3DSA:3.90.170.10 265 423 1.2E-69 T 09-03-2017 LS838_RS01355 8f079f12651a154a32780bae9bae39c8 429 SUPERFAMILY SSF52540 1 427 1.27E-169 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01355 8f079f12651a154a32780bae9bae39c8 429 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 09-03-2017 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 LS838_RS01355 8f079f12651a154a32780bae9bae39c8 429 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 426 5.5E-173 T 09-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 LS838_RS01355 8f079f12651a154a32780bae9bae39c8 429 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 09-03-2017 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 LS838_RS01355 8f079f12651a154a32780bae9bae39c8 429 Gene3D G3DSA:3.40.440.10 2 93 3.0E-63 T 09-03-2017 LS838_RS01355 8f079f12651a154a32780bae9bae39c8 429 Gene3D G3DSA:3.40.440.10 195 264 3.0E-63 T 09-03-2017 LS838_RS01355 8f079f12651a154a32780bae9bae39c8 429 SMART SM00788 3 422 7.5E-271 T 09-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 LS838_RS01355 8f079f12651a154a32780bae9bae39c8 429 Pfam PF00709 Adenylosuccinate synthetase 5 421 1.3E-172 T 09-03-2017 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 LS838_RS04960 9668656613fd6c25b60f8df756812f81 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.6E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS04960 9668656613fd6c25b60f8df756812f81 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-11 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS04960 9668656613fd6c25b60f8df756812f81 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-11 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS04960 9668656613fd6c25b60f8df756812f81 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-11 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS04960 9668656613fd6c25b60f8df756812f81 298 SUPERFAMILY SSF46785 1 85 7.07E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS04960 9668656613fd6c25b60f8df756812f81 298 Gene3D G3DSA:1.10.10.10 1 81 2.6E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS04960 9668656613fd6c25b60f8df756812f81 298 SUPERFAMILY SSF53850 91 291 1.57E-21 T 09-03-2017 LS838_RS04960 9668656613fd6c25b60f8df756812f81 298 Pfam PF03466 LysR substrate binding domain 91 290 1.2E-20 T 09-03-2017 IPR005119 LysR, substrate-binding LS838_RS04960 9668656613fd6c25b60f8df756812f81 298 Gene3D G3DSA:3.40.190.10 89 182 2.7E-17 T 09-03-2017 LS838_RS04960 9668656613fd6c25b60f8df756812f81 298 Gene3D G3DSA:3.40.190.10 183 258 4.0E-5 T 09-03-2017 LS838_RS06610 fb4b4e027041160b10eb6c9b16f51167 384 SUPERFAMILY SSF52374 171 208 1.25E-15 T 09-03-2017 LS838_RS06610 fb4b4e027041160b10eb6c9b16f51167 384 SUPERFAMILY SSF52374 10 105 1.25E-15 T 09-03-2017 LS838_RS06610 fb4b4e027041160b10eb6c9b16f51167 384 Hamap MF_01539 UPF0348 protein . 2 382 35.278 T 09-03-2017 IPR008513 Uncharacterised protein family UPF0348 LS838_RS06610 fb4b4e027041160b10eb6c9b16f51167 384 Pfam PF05636 HIGH Nucleotidyl Transferase 1 370 3.6E-108 T 09-03-2017 IPR008513 Uncharacterised protein family UPF0348 LS838_RS06610 fb4b4e027041160b10eb6c9b16f51167 384 Gene3D G3DSA:3.40.50.620 1 224 7.3E-66 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS04030 d6c0d0464e92db1a17d6806ab5287f47 408 TIGRFAM TIGR00532 HMG_CoA_R_NAD: hydroxymethylglutaryl-CoA reductase, degradative 27 365 8.0E-78 T 09-03-2017 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type GO:0015936|GO:0016616|GO:0050662 LS838_RS04030 d6c0d0464e92db1a17d6806ab5287f47 408 SUPERFAMILY SSF55035 98 199 2.62E-19 T 09-03-2017 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 LS838_RS04030 d6c0d0464e92db1a17d6806ab5287f47 408 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 36 57 6.0E-5 T 09-03-2017 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 LS838_RS04030 d6c0d0464e92db1a17d6806ab5287f47 408 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 153 171 6.0E-5 T 09-03-2017 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 LS838_RS04030 d6c0d0464e92db1a17d6806ab5287f47 408 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 63 83 6.0E-5 T 09-03-2017 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 LS838_RS04030 d6c0d0464e92db1a17d6806ab5287f47 408 Gene3D G3DSA:3.30.70.420 103 199 3.5E-19 T 09-03-2017 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 LS838_RS04030 d6c0d0464e92db1a17d6806ab5287f47 408 SUPERFAMILY SSF56542 1 105 6.54E-86 T 09-03-2017 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 LS838_RS04030 d6c0d0464e92db1a17d6806ab5287f47 408 SUPERFAMILY SSF56542 210 407 6.54E-86 T 09-03-2017 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 LS838_RS04030 d6c0d0464e92db1a17d6806ab5287f47 408 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 9 365 1.7E-81 T 09-03-2017 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 LS838_RS04030 d6c0d0464e92db1a17d6806ab5287f47 408 Gene3D G3DSA:3.90.770.10 215 354 8.1E-73 T 09-03-2017 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 LS838_RS04030 d6c0d0464e92db1a17d6806ab5287f47 408 Gene3D G3DSA:3.90.770.10 2 102 8.1E-73 T 09-03-2017 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 LS838_RS06015 1dedaf48ecf4e514ebf8a0db3d26b262 78 Pfam PF05979 Bacterial protein of unknown function (DUF896) 8 69 4.4E-27 T 09-03-2017 IPR009242 Protein of unknown function DUF896 LS838_RS06015 1dedaf48ecf4e514ebf8a0db3d26b262 78 Gene3D G3DSA:1.10.287.540 6 61 1.3E-24 T 09-03-2017 IPR023218 UPF0291 structural domain LS838_RS06015 1dedaf48ecf4e514ebf8a0db3d26b262 78 SUPERFAMILY SSF158221 5 43 6.15E-11 T 09-03-2017 LS838_RS06015 1dedaf48ecf4e514ebf8a0db3d26b262 78 Hamap MF_01103 UPF0291 protein . 1 61 13.525 T 09-03-2017 IPR009242 Protein of unknown function DUF896 LS838_RS03795 c32901944899900148c3cd9bbb027019 589 Pfam PF00224 Pyruvate kinase, barrel domain 1 345 7.0E-160 T 09-03-2017 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LS838_RS03795 c32901944899900148c3cd9bbb027019 589 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 475 5.0E-175 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LS838_RS03795 c32901944899900148c3cd9bbb027019 589 Gene3D G3DSA:3.50.30.10 474 582 1.4E-26 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LS838_RS03795 c32901944899900148c3cd9bbb027019 589 PRINTS PR01050 Pyruvate kinase family signature 245 269 3.4E-71 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LS838_RS03795 c32901944899900148c3cd9bbb027019 589 PRINTS PR01050 Pyruvate kinase family signature 187 201 3.4E-71 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LS838_RS03795 c32901944899900148c3cd9bbb027019 589 PRINTS PR01050 Pyruvate kinase family signature 314 330 3.4E-71 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LS838_RS03795 c32901944899900148c3cd9bbb027019 589 PRINTS PR01050 Pyruvate kinase family signature 295 313 3.4E-71 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LS838_RS03795 c32901944899900148c3cd9bbb027019 589 PRINTS PR01050 Pyruvate kinase family signature 270 294 3.4E-71 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LS838_RS03795 c32901944899900148c3cd9bbb027019 589 PRINTS PR01050 Pyruvate kinase family signature 59 75 3.4E-71 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LS838_RS03795 c32901944899900148c3cd9bbb027019 589 PRINTS PR01050 Pyruvate kinase family signature 218 244 3.4E-71 T 09-03-2017 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LS838_RS03795 c32901944899900148c3cd9bbb027019 589 Gene3D G3DSA:3.20.20.60 2 72 1.3E-104 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LS838_RS03795 c32901944899900148c3cd9bbb027019 589 Gene3D G3DSA:3.20.20.60 170 326 1.3E-104 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LS838_RS03795 c32901944899900148c3cd9bbb027019 589 SUPERFAMILY SSF51621 157 342 6.98E-99 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LS838_RS03795 c32901944899900148c3cd9bbb027019 589 SUPERFAMILY SSF51621 1 74 6.98E-99 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LS838_RS03795 c32901944899900148c3cd9bbb027019 589 SUPERFAMILY SSF52935 350 548 9.92E-49 T 09-03-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LS838_RS03795 c32901944899900148c3cd9bbb027019 589 SUPERFAMILY SSF50800 71 168 1.71E-22 T 09-03-2017 IPR011037 Pyruvate kinase-like, insert domain LS838_RS03795 c32901944899900148c3cd9bbb027019 589 Pfam PF02887 Pyruvate kinase, alpha/beta domain 361 472 1.1E-37 T 09-03-2017 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LS838_RS03795 c32901944899900148c3cd9bbb027019 589 Gene3D G3DSA:2.40.33.10 73 169 5.8E-26 T 09-03-2017 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LS838_RS03795 c32901944899900148c3cd9bbb027019 589 Pfam PF00391 PEP-utilising enzyme, mobile domain 508 579 3.1E-21 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LS838_RS03795 c32901944899900148c3cd9bbb027019 589 Gene3D G3DSA:3.40.1380.20 327 473 2.0E-50 T 09-03-2017 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 LS838_RS05600 dd61bc0cad63fc25200cb973ef1d1606 138 Gene3D G3DSA:3.40.140.10 3 123 4.3E-38 T 09-03-2017 LS838_RS05600 dd61bc0cad63fc25200cb973ef1d1606 138 SUPERFAMILY SSF53927 6 123 1.29E-37 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 LS838_RS05600 dd61bc0cad63fc25200cb973ef1d1606 138 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 101 1.4E-14 T 09-03-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 LS838_RS05600 dd61bc0cad63fc25200cb973ef1d1606 138 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 96 - T 09-03-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 LS838_RS05600 dd61bc0cad63fc25200cb973ef1d1606 138 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 7 122 1.6E-38 T 09-03-2017 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-73614 LS838_RS03560 b53c727b9742c484b462813959cd59b5 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 2 396 58.5 T 09-03-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LS838_RS03560 b53c727b9742c484b462813959cd59b5 396 SUPERFAMILY SSF50465 304 395 7.77E-34 T 09-03-2017 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal LS838_RS03560 b53c727b9742c484b462813959cd59b5 396 SUPERFAMILY SSF50447 206 301 2.16E-29 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain LS838_RS03560 b53c727b9742c484b462813959cd59b5 396 Gene3D G3DSA:2.40.30.10 211 300 1.3E-36 T 09-03-2017 LS838_RS03560 b53c727b9742c484b462813959cd59b5 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site LS838_RS03560 b53c727b9742c484b462813959cd59b5 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 4 394 1.7E-215 T 09-03-2017 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LS838_RS03560 b53c727b9742c484b462813959cd59b5 396 SUPERFAMILY SSF52540 9 227 1.13E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03560 b53c727b9742c484b462813959cd59b5 396 PRINTS PR00315 GTP-binding elongation factor signature 79 89 9.1E-25 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS03560 b53c727b9742c484b462813959cd59b5 396 PRINTS PR00315 GTP-binding elongation factor signature 59 67 9.1E-25 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS03560 b53c727b9742c484b462813959cd59b5 396 PRINTS PR00315 GTP-binding elongation factor signature 15 28 9.1E-25 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS03560 b53c727b9742c484b462813959cd59b5 396 PRINTS PR00315 GTP-binding elongation factor signature 95 106 9.1E-25 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS03560 b53c727b9742c484b462813959cd59b5 396 PRINTS PR00315 GTP-binding elongation factor signature 132 141 9.1E-25 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS03560 b53c727b9742c484b462813959cd59b5 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 8.6E-31 T 09-03-2017 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal LS838_RS03560 b53c727b9742c484b462813959cd59b5 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 150 3.3E-15 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LS838_RS03560 b53c727b9742c484b462813959cd59b5 396 Gene3D G3DSA:3.40.50.300 4 210 1.4E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03560 b53c727b9742c484b462813959cd59b5 396 Pfam PF00009 Elongation factor Tu GTP binding domain 11 202 1.5E-60 T 09-03-2017 LS838_RS03560 b53c727b9742c484b462813959cd59b5 396 Pfam PF03144 Elongation factor Tu domain 2 226 295 1.7E-15 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 LS838_RS03560 b53c727b9742c484b462813959cd59b5 396 Gene3D G3DSA:2.40.30.10 303 394 5.9E-43 T 09-03-2017 LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 Pfam PF00575 S1 RNA binding domain 196 265 3.0E-24 T 09-03-2017 IPR003029 S1 domain GO:0003676 LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 Pfam PF00575 S1 RNA binding domain 279 351 3.0E-24 T 09-03-2017 IPR003029 S1 domain GO:0003676 LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 Pfam PF00575 S1 RNA binding domain 108 176 4.2E-16 T 09-03-2017 IPR003029 S1 domain GO:0003676 LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 Pfam PF00575 S1 RNA binding domain 17 77 2.1E-6 T 09-03-2017 IPR003029 S1 domain GO:0003676 LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 Gene3D G3DSA:2.40.50.140 279 353 6.1E-31 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 Gene3D G3DSA:2.40.50.140 102 177 2.9E-18 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 Gene3D G3DSA:2.40.50.140 14 92 1.6E-11 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 SUPERFAMILY SSF50249 280 358 6.01E-26 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 SUPERFAMILY SSF50249 98 180 2.11E-16 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 Gene3D G3DSA:2.40.50.140 197 278 1.3E-30 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 SUPERFAMILY SSF50249 196 277 1.29E-26 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 SMART SM00316 109 176 1.7E-14 T 09-03-2017 IPR022967 RNA-binding domain, S1 LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 SMART SM00316 280 351 6.2E-28 T 09-03-2017 IPR022967 RNA-binding domain, S1 LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 SMART SM00316 18 93 5.3E-4 T 09-03-2017 IPR022967 RNA-binding domain, S1 LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 SMART SM00316 195 265 1.4E-25 T 09-03-2017 IPR022967 RNA-binding domain, S1 LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 SUPERFAMILY SSF50249 4 119 4.05E-17 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 PRINTS PR00681 Ribosomal protein S1 signature 20 38 6.4E-48 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 PRINTS PR00681 Ribosomal protein S1 signature 90 109 6.4E-48 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 PRINTS PR00681 Ribosomal protein S1 signature 295 314 6.4E-48 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 PRINTS PR00681 Ribosomal protein S1 signature 334 352 6.4E-48 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 PRINTS PR00681 Ribosomal protein S1 signature 114 130 6.4E-48 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 PRINTS PR00681 Ribosomal protein S1 signature 131 148 6.4E-48 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 PRINTS PR00681 Ribosomal protein S1 signature 160 180 6.4E-48 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LS838_RS03855 477b75c46e53e06f3b471157c5675155 401 PRINTS PR00681 Ribosomal protein S1 signature 217 238 6.4E-48 T 09-03-2017 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 SUPERFAMILY SSF53067 1 158 6.64E-57 T 09-03-2017 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 Gene3D G3DSA:3.30.420.40 290 332 2.3E-34 T 09-03-2017 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 Gene3D G3DSA:3.30.420.40 166 200 2.3E-34 T 09-03-2017 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 167 180 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 PRINTS PR00301 70kDa heat shock protein signature 440 456 2.7E-77 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 PRINTS PR00301 70kDa heat shock protein signature 336 356 2.7E-77 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.7E-77 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 PRINTS PR00301 70kDa heat shock protein signature 53 61 2.7E-77 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 PRINTS PR00301 70kDa heat shock protein signature 113 133 2.7E-77 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 PRINTS PR00301 70kDa heat shock protein signature 359 378 2.7E-77 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.7E-77 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 PRINTS PR00301 70kDa heat shock protein signature 305 321 2.7E-77 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 PRINTS PR00301 70kDa heat shock protein signature 173 183 2.7E-77 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 610 36.35 T 09-03-2017 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 Gene3D G3DSA:2.60.34.10 361 502 3.2E-73 T 09-03-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 Pfam PF00012 Hsp70 protein 4 575 4.9E-241 T 09-03-2017 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 Gene3D G3DSA:1.20.1270.10 503 574 8.0E-21 T 09-03-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 Gene3D G3DSA:3.30.30.30 39 99 2.4E-13 T 09-03-2017 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 575 4.7E-282 T 09-03-2017 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 SUPERFAMILY SSF100934 478 579 2.35E-14 T 09-03-2017 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 Gene3D G3DSA:3.90.640.10 201 286 3.8E-29 T 09-03-2017 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 Gene3D G3DSA:3.30.420.40 100 165 1.4E-57 T 09-03-2017 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 Gene3D G3DSA:3.30.420.40 3 38 1.4E-57 T 09-03-2017 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 SUPERFAMILY SSF53067 162 352 5.93E-65 T 09-03-2017 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 SUPERFAMILY SSF100920 355 511 1.7E-62 T 09-03-2017 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 LS838_RS05870 867b5dd30119a7c6b8575591067f3f09 614 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 308 322 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 LS838_RS08760 6721d4e9d11c91e65df0c589d37f0f23 390 SMART SM00422 5 74 2.5E-23 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS08760 6721d4e9d11c91e65df0c589d37f0f23 390 SUPERFAMILY SSF46955 5 123 7.69E-28 T 09-03-2017 IPR009061 Putative DNA-binding domain LS838_RS08760 6721d4e9d11c91e65df0c589d37f0f23 390 Pfam PF08241 Methyltransferase domain 180 276 1.3E-22 T 09-03-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 LS838_RS08760 6721d4e9d11c91e65df0c589d37f0f23 390 Gene3D G3DSA:3.40.50.150 161 390 3.5E-39 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS08760 6721d4e9d11c91e65df0c589d37f0f23 390 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 41 61 1.3E-7 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS08760 6721d4e9d11c91e65df0c589d37f0f23 390 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 6 17 1.3E-7 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS08760 6721d4e9d11c91e65df0c589d37f0f23 390 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 1.3E-7 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS08760 6721d4e9d11c91e65df0c589d37f0f23 390 SUPERFAMILY SSF53335 152 390 2.01E-38 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS08760 6721d4e9d11c91e65df0c589d37f0f23 390 Gene3D G3DSA:1.10.1660.10 59 129 3.5E-8 T 09-03-2017 LS838_RS08760 6721d4e9d11c91e65df0c589d37f0f23 390 Gene3D G3DSA:1.10.1660.10 2 58 1.8E-25 T 09-03-2017 LS838_RS08760 6721d4e9d11c91e65df0c589d37f0f23 390 Pfam PF13411 MerR HTH family regulatory protein 5 70 9.7E-17 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS00710 739342068020a52b7cc39d5c0a6b6fd8 242 SUPERFAMILY SSF46894 135 236 2.55E-30 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LS838_RS00710 739342068020a52b7cc39d5c0a6b6fd8 242 Pfam PF00072 Response regulator receiver domain 5 114 2.1E-30 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LS838_RS00710 739342068020a52b7cc39d5c0a6b6fd8 242 SMART SM00448 3 113 8.5E-46 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LS838_RS00710 739342068020a52b7cc39d5c0a6b6fd8 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 235 3.1E-25 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LS838_RS00710 739342068020a52b7cc39d5c0a6b6fd8 242 Gene3D G3DSA:1.10.10.10 136 238 7.1E-34 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS00710 739342068020a52b7cc39d5c0a6b6fd8 242 SMART SM00862 160 236 3.7E-24 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LS838_RS00710 739342068020a52b7cc39d5c0a6b6fd8 242 Gene3D G3DSA:3.40.50.2300 2 121 9.4E-42 T 09-03-2017 LS838_RS00710 739342068020a52b7cc39d5c0a6b6fd8 242 SUPERFAMILY SSF52172 2 130 1.71E-41 T 09-03-2017 IPR011006 CheY-like superfamily LS838_RS08365 d9c0511150dc0386a78031bbfa6fd48b 304 Gene3D G3DSA:3.40.710.10 76 290 2.7E-14 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS08365 d9c0511150dc0386a78031bbfa6fd48b 304 SUPERFAMILY SSF56601 118 296 3.9E-17 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS08365 d9c0511150dc0386a78031bbfa6fd48b 304 Pfam PF13354 Beta-lactamase enzyme family 116 253 3.4E-17 T 09-03-2017 LS838_RS06580 a347a953d1e10c538ba1fdc1d13c3950 254 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 31 101 5.7E-9 T 09-03-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 LS838_RS06580 a347a953d1e10c538ba1fdc1d13c3950 254 Pfam PF00588 SpoU rRNA Methylase family 113 251 6.6E-34 T 09-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LS838_RS06580 a347a953d1e10c538ba1fdc1d13c3950 254 SUPERFAMILY SSF75217 109 253 4.97E-40 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases LS838_RS06580 a347a953d1e10c538ba1fdc1d13c3950 254 SUPERFAMILY SSF55315 5 99 3.3E-21 T 09-03-2017 IPR029064 50S ribosomal protein L30e-like LS838_RS06580 a347a953d1e10c538ba1fdc1d13c3950 254 SMART SM00967 31 103 1.2E-10 T 09-03-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 LS838_RS06580 a347a953d1e10c538ba1fdc1d13c3950 254 Gene3D G3DSA:3.30.1330.30 5 99 1.5E-24 T 09-03-2017 IPR029064 50S ribosomal protein L30e-like LS838_RS06580 a347a953d1e10c538ba1fdc1d13c3950 254 Gene3D G3DSA:3.40.1280.10 111 253 7.3E-45 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 353 359 - T 09-03-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 PRINTS PR01836 Magnesium-transporting ATPase signature 385 398 2.8E-51 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 PRINTS PR01836 Magnesium-transporting ATPase signature 681 696 2.8E-51 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 PRINTS PR01836 Magnesium-transporting ATPase signature 281 300 2.8E-51 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 PRINTS PR01836 Magnesium-transporting ATPase signature 699 710 2.8E-51 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 PRINTS PR01836 Magnesium-transporting ATPase signature 751 767 2.8E-51 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 PRINTS PR01836 Magnesium-transporting ATPase signature 264 280 2.8E-51 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 PRINTS PR01836 Magnesium-transporting ATPase signature 799 820 2.8E-51 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 PRINTS PR01836 Magnesium-transporting ATPase signature 731 744 2.8E-51 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 Gene3D G3DSA:2.70.150.10 134 251 3.4E-39 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 Gene3D G3DSA:2.70.150.10 35 71 3.4E-39 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 SUPERFAMILY SSF81665 252 345 1.03E-86 T 09-03-2017 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 SUPERFAMILY SSF81665 29 139 1.03E-86 T 09-03-2017 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 SUPERFAMILY SSF81665 672 890 1.03E-86 T 09-03-2017 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 Gene3D G3DSA:3.40.1110.10 343 530 2.4E-39 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 Pfam PF00690 Cation transporter/ATPase, N-terminus 29 87 3.2E-12 T 09-03-2017 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 SUPERFAMILY SSF81660 318 525 1.47E-38 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 16 891 3.0E-297 T 09-03-2017 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 SUPERFAMILY SSF81653 139 250 7.85E-28 T 09-03-2017 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 Gene3D G3DSA:1.20.1110.10 72 133 3.5E-62 T 09-03-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 Gene3D G3DSA:1.20.1110.10 592 888 3.5E-62 T 09-03-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 SMART SM00831 21 92 1.5E-4 T 09-03-2017 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 Pfam PF00122 E1-E2 ATPase 106 342 4.6E-55 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 589 712 3.7E-31 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 244 387 2.1E-18 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 SUPERFAMILY SSF56784 516 670 8.46E-35 T 09-03-2017 IPR023214 HAD-like domain LS838_RS01565 3119286acce9ab9be23fab9d4fe0cbcc 896 Pfam PF00702 haloacid dehalogenase-like hydrolase 349 637 2.7E-20 T 09-03-2017 LS838_RS06330 647beeef5b3936f1fe96b33722de7f50 258 SUPERFAMILY SSF52540 5 253 4.6E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06330 647beeef5b3936f1fe96b33722de7f50 258 Gene3D G3DSA:3.40.50.300 3 250 1.1E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06330 647beeef5b3936f1fe96b33722de7f50 258 SMART SM00382 29 230 1.1E-5 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS06330 647beeef5b3936f1fe96b33722de7f50 258 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 231 253 4.9E-9 T 09-03-2017 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal LS838_RS06330 647beeef5b3936f1fe96b33722de7f50 258 Pfam PF00005 ABC transporter 21 181 3.9E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS05145 21226edf7f8fd06f5b9effa71ca83e8b 489 SUPERFAMILY SSF51905 425 486 1.12E-35 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS05145 21226edf7f8fd06f5b9effa71ca83e8b 489 SUPERFAMILY SSF51905 2 235 1.12E-35 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS05145 21226edf7f8fd06f5b9effa71ca83e8b 489 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 442 457 1.1E-5 T 09-03-2017 LS838_RS05145 21226edf7f8fd06f5b9effa71ca83e8b 489 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.1E-5 T 09-03-2017 LS838_RS05145 21226edf7f8fd06f5b9effa71ca83e8b 489 Pfam PF00890 FAD binding domain 4 461 1.2E-48 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS05145 21226edf7f8fd06f5b9effa71ca83e8b 489 Gene3D G3DSA:3.50.50.60 422 486 2.0E-58 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS05145 21226edf7f8fd06f5b9effa71ca83e8b 489 Gene3D G3DSA:3.50.50.60 2 233 2.0E-58 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS05145 21226edf7f8fd06f5b9effa71ca83e8b 489 SUPERFAMILY SSF56425 347 425 2.33E-23 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS05145 21226edf7f8fd06f5b9effa71ca83e8b 489 SUPERFAMILY SSF56425 256 312 2.33E-23 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS05145 21226edf7f8fd06f5b9effa71ca83e8b 489 Gene3D G3DSA:3.90.700.10 346 415 2.0E-26 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS05145 21226edf7f8fd06f5b9effa71ca83e8b 489 Gene3D G3DSA:3.90.700.10 264 311 2.0E-26 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS00445 3c6468566d0f87d1bae68a61fca0bc9f 237 SUPERFAMILY SSF56784 3 228 4.27E-47 T 09-03-2017 IPR023214 HAD-like domain LS838_RS00445 3c6468566d0f87d1bae68a61fca0bc9f 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 199 7.0E-26 T 09-03-2017 IPR023214 HAD-like domain LS838_RS00445 3c6468566d0f87d1bae68a61fca0bc9f 237 Gene3D G3DSA:3.40.50.1000 94 229 4.6E-39 T 09-03-2017 IPR023214 HAD-like domain LS838_RS00445 3c6468566d0f87d1bae68a61fca0bc9f 237 Gene3D G3DSA:1.10.150.240 18 93 5.1E-18 T 09-03-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 LS838_RS00445 3c6468566d0f87d1bae68a61fca0bc9f 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 112 125 2.4E-11 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LS838_RS00445 3c6468566d0f87d1bae68a61fca0bc9f 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 159 2.4E-11 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LS838_RS00445 3c6468566d0f87d1bae68a61fca0bc9f 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 2.4E-11 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LS838_RS00445 3c6468566d0f87d1bae68a61fca0bc9f 237 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 189 202 2.4E-11 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LS838_RS00445 3c6468566d0f87d1bae68a61fca0bc9f 237 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 96 194 2.9E-10 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LS838_RS00445 3c6468566d0f87d1bae68a61fca0bc9f 237 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 226 1.2E-48 T 09-03-2017 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 LS838_RS08335 da6e70f5ae46d646827128c7253d9995 223 Pfam PF00117 Glutamine amidotransferase class-I 41 170 2.3E-17 T 09-03-2017 IPR017926 Glutamine amidotransferase LS838_RS08335 da6e70f5ae46d646827128c7253d9995 223 SUPERFAMILY SSF52317 2 185 1.1E-40 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS08335 da6e70f5ae46d646827128c7253d9995 223 Gene3D G3DSA:3.40.50.880 1 203 4.2E-49 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS05715 06d7e20fa5de3b9230059f12d133f164 76 Gene3D G3DSA:1.10.150.260 5 74 1.7E-27 T 09-03-2017 IPR023089 YozE SAM-like domain LS838_RS05715 06d7e20fa5de3b9230059f12d133f164 76 PIRSF PIRSF037262 3 75 6.0E-28 T 09-03-2017 IPR010673 Protein of unknown function UPF0346 LS838_RS05715 06d7e20fa5de3b9230059f12d133f164 76 SUPERFAMILY SSF140652 4 74 1.96E-27 T 09-03-2017 IPR023089 YozE SAM-like domain LS838_RS05715 06d7e20fa5de3b9230059f12d133f164 76 Pfam PF06855 YozE SAM-like fold 6 72 1.3E-25 T 09-03-2017 IPR023089 YozE SAM-like domain LS838_RS05715 06d7e20fa5de3b9230059f12d133f164 76 Hamap MF_01538 UPF0346 protein . 3 73 20.918 T 09-03-2017 IPR010673 Protein of unknown function UPF0346 LS838_RS01715 50dadc98062c6dbf78e18765a1619d3a 428 Pfam PF01546 Peptidase family M20/M25/M40 145 408 6.8E-17 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LS838_RS01715 50dadc98062c6dbf78e18765a1619d3a 428 SUPERFAMILY SSF53187 11 217 1.47E-65 T 09-03-2017 LS838_RS01715 50dadc98062c6dbf78e18765a1619d3a 428 SUPERFAMILY SSF53187 329 412 1.47E-65 T 09-03-2017 LS838_RS01715 50dadc98062c6dbf78e18765a1619d3a 428 Gene3D G3DSA:3.40.630.10 329 413 5.2E-94 T 09-03-2017 LS838_RS01715 50dadc98062c6dbf78e18765a1619d3a 428 Gene3D G3DSA:3.40.630.10 10 216 5.2E-94 T 09-03-2017 LS838_RS01715 50dadc98062c6dbf78e18765a1619d3a 428 Pfam PF07687 Peptidase dimerisation domain 214 314 3.1E-6 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain LS838_RS01715 50dadc98062c6dbf78e18765a1619d3a 428 TIGRFAM TIGR01882 peptidase-T: peptidase T 11 412 4.9E-120 T 09-03-2017 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 LS838_RS01715 50dadc98062c6dbf78e18765a1619d3a 428 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 144 183 - T 09-03-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LS838_RS01715 50dadc98062c6dbf78e18765a1619d3a 428 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 78 87 - T 09-03-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LS838_RS01715 50dadc98062c6dbf78e18765a1619d3a 428 Gene3D G3DSA:3.30.70.360 217 326 8.9E-34 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain LS838_RS01715 50dadc98062c6dbf78e18765a1619d3a 428 SUPERFAMILY SSF55031 216 326 2.2E-29 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain LS838_RS01715 50dadc98062c6dbf78e18765a1619d3a 428 PIRSF PIRSF037215 5 415 3.2E-153 T 09-03-2017 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 LS838_RS04545 38b5e43064a75f258832199eb3defa0c 186 PIRSF PIRSF021290 1 180 3.2E-64 T 09-03-2017 IPR010697 Protein of unknown function DUF1273 LS838_RS04545 38b5e43064a75f258832199eb3defa0c 186 SUPERFAMILY SSF102405 1 177 4.85E-59 T 09-03-2017 LS838_RS04545 38b5e43064a75f258832199eb3defa0c 186 Gene3D G3DSA:3.40.50.450 1 180 2.0E-62 T 09-03-2017 LS838_RS04545 38b5e43064a75f258832199eb3defa0c 186 Pfam PF06908 Protein of unknown function (DUF1273) 4 172 1.3E-66 T 09-03-2017 IPR010697 Protein of unknown function DUF1273 LS838_RS04545 38b5e43064a75f258832199eb3defa0c 186 Hamap MF_01575 UPF0398 protein . 1 178 36.7 T 09-03-2017 IPR010697 Protein of unknown function DUF1273 LS838_RS02690 1f371484ff7e04931d80277e8d70b73a 275 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 271 17.92 T 09-03-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 LS838_RS02690 1f371484ff7e04931d80277e8d70b73a 275 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 264 1.5E-70 T 09-03-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 LS838_RS02690 1f371484ff7e04931d80277e8d70b73a 275 Pfam PF02673 Bacitracin resistance protein BacA 7 266 7.3E-81 T 09-03-2017 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 SMART SM01096 429 550 6.4E-17 T 09-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 SUPERFAMILY SSF52440 563 669 9.78E-25 T 09-03-2017 IPR016185 Pre-ATP-grasp domain LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 Gene3D G3DSA:1.10.1030.10 420 542 5.2E-20 T 09-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 Pfam PF02142 MGS-like domain 955 1040 1.8E-15 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 Gene3D G3DSA:3.30.470.20 737 932 2.3E-33 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 Gene3D G3DSA:3.30.470.20 215 407 7.4E-33 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 Gene3D G3DSA:3.40.50.20 543 667 2.1E-26 T 09-03-2017 IPR016185 Pre-ATP-grasp domain LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 SUPERFAMILY SSF48108 421 555 4.05E-22 T 09-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 Gene3D G3DSA:3.40.50.1380 936 1056 2.9E-30 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 SUPERFAMILY SSF56059 689 931 2.55E-50 T 09-03-2017 LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 SMART SM00851 954 1041 6.7E-18 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 432 550 4.6E-16 T 09-03-2017 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 SUPERFAMILY SSF52335 935 1055 1.57E-24 T 09-03-2017 IPR011607 Methylglyoxal synthase-like domain LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 Gene3D G3DSA:3.40.50.20 4 108 3.0E-22 T 09-03-2017 IPR016185 Pre-ATP-grasp domain LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 SUPERFAMILY SSF52440 1 125 1.21E-26 T 09-03-2017 IPR016185 Pre-ATP-grasp domain LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 SUPERFAMILY SSF56059 162 407 8.33E-48 T 09-03-2017 LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 691 871 4.9E-9 T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 214 342 3.6E-10 T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 5.5E-22 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 211 230 5.5E-22 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 246 263 5.5E-22 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 305 334 5.5E-22 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS04595 68f1c6c5f2091145506de5a0e20fa851 1063 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 386 404 5.5E-22 T 09-03-2017 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS06545 008b65d85b0c593b90437ae4fdc666ea 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 09-03-2017 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS06545 008b65d85b0c593b90437ae4fdc666ea 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 5 49 4.5E-20 T 09-03-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06545 008b65d85b0c593b90437ae4fdc666ea 49 Pfam PF00471 Ribosomal protein L33 4 49 1.0E-20 T 09-03-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06545 008b65d85b0c593b90437ae4fdc666ea 49 SUPERFAMILY SSF57829 3 49 2.01E-17 T 09-03-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 LS838_RS06545 008b65d85b0c593b90437ae4fdc666ea 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 17.426 T 09-03-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS04140 23a88742d07114d6348f580f4910a5f3 254 SUPERFAMILY SSF51735 7 253 1.1E-54 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS04140 23a88742d07114d6348f580f4910a5f3 254 Gene3D G3DSA:3.40.50.720 7 201 2.0E-59 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS04140 23a88742d07114d6348f580f4910a5f3 254 PIRSF PIRSF000094 2 254 4.7E-90 T 09-03-2017 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LS838_RS04140 23a88742d07114d6348f580f4910a5f3 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 252 4.1E-74 T 09-03-2017 LS838_RS07735 b8d09e012af824f47189bfe40372bcbe 193 Pfam PF01965 DJ-1/PfpI family 4 167 1.4E-35 T 09-03-2017 IPR002818 DJ-1/PfpI LS838_RS07735 b8d09e012af824f47189bfe40372bcbe 193 SUPERFAMILY SSF52317 1 172 6.46E-38 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS07735 b8d09e012af824f47189bfe40372bcbe 193 Gene3D G3DSA:3.40.50.880 1 185 1.5E-42 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS02815 ed316374fec8c8eb8411703d0d55ea20 310 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 292 1.0E-46 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS02815 ed316374fec8c8eb8411703d0d55ea20 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 193 209 1.0E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LS838_RS02815 ed316374fec8c8eb8411703d0d55ea20 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 59 69 1.0E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LS838_RS02815 ed316374fec8c8eb8411703d0d55ea20 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 1.0E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LS838_RS02815 ed316374fec8c8eb8411703d0d55ea20 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 232 253 1.0E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LS838_RS02815 ed316374fec8c8eb8411703d0d55ea20 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 284 1.0E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LS838_RS02815 ed316374fec8c8eb8411703d0d55ea20 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 126 138 1.0E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LS838_RS02815 ed316374fec8c8eb8411703d0d55ea20 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 141 165 1.0E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LS838_RS02815 ed316374fec8c8eb8411703d0d55ea20 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 1.0E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LS838_RS02815 ed316374fec8c8eb8411703d0d55ea20 310 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 104 112 1.0E-66 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LS838_RS02815 ed316374fec8c8eb8411703d0d55ea20 310 SUPERFAMILY SSF51905 1 303 1.53E-56 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS02815 ed316374fec8c8eb8411703d0d55ea20 310 Gene3D G3DSA:3.50.50.60 109 300 1.3E-36 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS02815 ed316374fec8c8eb8411703d0d55ea20 310 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 6 303 3.8E-110 T 09-03-2017 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 LS838_RS02815 ed316374fec8c8eb8411703d0d55ea20 310 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 133 153 - T 09-03-2017 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 LS838_RS02815 ed316374fec8c8eb8411703d0d55ea20 310 Gene3D G3DSA:3.50.50.60 2 108 2.3E-30 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS02815 ed316374fec8c8eb8411703d0d55ea20 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.1E-35 T 09-03-2017 LS838_RS02815 ed316374fec8c8eb8411703d0d55ea20 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 2.1E-35 T 09-03-2017 LS838_RS02815 ed316374fec8c8eb8411703d0d55ea20 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 2.1E-35 T 09-03-2017 LS838_RS02815 ed316374fec8c8eb8411703d0d55ea20 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 2.1E-35 T 09-03-2017 LS838_RS02815 ed316374fec8c8eb8411703d0d55ea20 310 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 2.1E-35 T 09-03-2017 LS838_RS07710 fd89466c442443155cc1d36db3a062b4 225 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 224 36.485 T 09-03-2017 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 LS838_RS07710 fd89466c442443155cc1d36db3a062b4 225 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 126 1.6E-26 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LS838_RS07710 fd89466c442443155cc1d36db3a062b4 225 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 132 215 3.4E-6 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LS838_RS07710 fd89466c442443155cc1d36db3a062b4 225 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 09-03-2017 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 LS838_RS07710 fd89466c442443155cc1d36db3a062b4 225 SUPERFAMILY SSF53254 1 216 6.68E-60 T 09-03-2017 IPR029033 Histidine phosphatase superfamily LS838_RS07710 fd89466c442443155cc1d36db3a062b4 225 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 222 1.8E-75 T 09-03-2017 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 LS838_RS07710 fd89466c442443155cc1d36db3a062b4 225 SMART SM00855 3 185 1.3E-23 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LS838_RS07710 fd89466c442443155cc1d36db3a062b4 225 Gene3D G3DSA:3.40.50.1240 1 222 1.8E-69 T 09-03-2017 IPR029033 Histidine phosphatase superfamily LS838_RS00535 474f039a0856df1c46578c6888df9277 520 SUPERFAMILY SSF52540 318 515 1.78E-38 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00535 474f039a0856df1c46578c6888df9277 520 SUPERFAMILY SSF90123 3 288 2.35E-34 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS00535 474f039a0856df1c46578c6888df9277 520 ProSitePatterns PS00211 ABC transporters family signature. 444 458 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS00535 474f039a0856df1c46578c6888df9277 520 Pfam PF00005 ABC transporter 337 470 6.5E-27 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS00535 474f039a0856df1c46578c6888df9277 520 Gene3D G3DSA:1.20.1560.10 3 299 1.2E-29 T 09-03-2017 LS838_RS00535 474f039a0856df1c46578c6888df9277 520 Pfam PF00664 ABC transporter transmembrane region 15 274 1.3E-7 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS00535 474f039a0856df1c46578c6888df9277 520 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 346 359 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LS838_RS00535 474f039a0856df1c46578c6888df9277 520 SMART SM00382 342 518 2.1E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS00535 474f039a0856df1c46578c6888df9277 520 Gene3D G3DSA:3.40.50.300 317 510 5.0E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09350 d316edbb8d846f3aa99b51198a88c237 502 SUPERFAMILY SSF53067 5 254 8.61E-95 T 09-03-2017 LS838_RS09350 d316edbb8d846f3aa99b51198a88c237 502 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 252 5.1E-83 T 09-03-2017 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 LS838_RS09350 d316edbb8d846f3aa99b51198a88c237 502 PIRSF PIRSF000538 3 500 1.0E-165 T 09-03-2017 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 LS838_RS09350 d316edbb8d846f3aa99b51198a88c237 502 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 09-03-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 LS838_RS09350 d316edbb8d846f3aa99b51198a88c237 502 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 493 1.2E-219 T 09-03-2017 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 LS838_RS09350 d316edbb8d846f3aa99b51198a88c237 502 Gene3D G3DSA:3.30.420.40 1 253 4.0E-105 T 09-03-2017 LS838_RS09350 d316edbb8d846f3aa99b51198a88c237 502 Hamap MF_00186 Glycerol kinase [glpK]. 3 497 56.157 T 09-03-2017 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 LS838_RS09350 d316edbb8d846f3aa99b51198a88c237 502 SUPERFAMILY SSF53067 255 492 1.77E-76 T 09-03-2017 LS838_RS09350 d316edbb8d846f3aa99b51198a88c237 502 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 450 3.7E-54 T 09-03-2017 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 LS838_RS09350 d316edbb8d846f3aa99b51198a88c237 502 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 09-03-2017 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 LS838_RS09350 d316edbb8d846f3aa99b51198a88c237 502 Gene3D G3DSA:3.30.420.40 255 494 2.0E-93 T 09-03-2017 LS838_RS03320 4b34f012b6e737d4b06d04e20f82e3b0 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 144 197 1.5E-10 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LS838_RS03320 4b34f012b6e737d4b06d04e20f82e3b0 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 197 3.5E-29 T 09-03-2017 IPR023214 HAD-like domain LS838_RS03320 4b34f012b6e737d4b06d04e20f82e3b0 226 SUPERFAMILY SSF56784 11 225 6.2E-40 T 09-03-2017 IPR023214 HAD-like domain LS838_RS03320 4b34f012b6e737d4b06d04e20f82e3b0 226 Gene3D G3DSA:3.40.50.1000 9 24 2.5E-32 T 09-03-2017 IPR023214 HAD-like domain LS838_RS03320 4b34f012b6e737d4b06d04e20f82e3b0 226 Gene3D G3DSA:3.40.50.1000 97 223 2.5E-32 T 09-03-2017 IPR023214 HAD-like domain LS838_RS06600 6edd067d06e799ae6f8625f8e6106b4b 237 Gene3D G3DSA:3.40.50.2300 2 126 1.1E-39 T 09-03-2017 LS838_RS06600 6edd067d06e799ae6f8625f8e6106b4b 237 SMART SM00448 2 112 9.7E-42 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LS838_RS06600 6edd067d06e799ae6f8625f8e6106b4b 237 SMART SM00862 155 230 4.6E-23 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LS838_RS06600 6edd067d06e799ae6f8625f8e6106b4b 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 4.3E-24 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LS838_RS06600 6edd067d06e799ae6f8625f8e6106b4b 237 Gene3D G3DSA:1.10.10.10 132 231 2.5E-30 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS06600 6edd067d06e799ae6f8625f8e6106b4b 237 Pfam PF00072 Response regulator receiver domain 4 112 1.0E-26 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LS838_RS06600 6edd067d06e799ae6f8625f8e6106b4b 237 SUPERFAMILY SSF46894 132 230 8.32E-28 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LS838_RS06600 6edd067d06e799ae6f8625f8e6106b4b 237 SUPERFAMILY SSF52172 1 123 2.13E-40 T 09-03-2017 IPR011006 CheY-like superfamily LS838_RS05900 77134c0de2ba4c475c5bad3e3b159ab4 825 SUPERFAMILY SSF50447 499 580 4.71E-23 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain LS838_RS05900 77134c0de2ba4c475c5bad3e3b159ab4 825 Gene3D G3DSA:3.40.50.10050 627 705 1.6E-26 T 09-03-2017 IPR023115 Translation initiation factor IF- 2, domain 3 LS838_RS05900 77134c0de2ba4c475c5bad3e3b159ab4 825 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 250 295 1.8E-9 T 09-03-2017 IPR006847 Translation initiation factor IF-2, N-terminal LS838_RS05900 77134c0de2ba4c475c5bad3e3b159ab4 825 Pfam PF11987 Translation-initiation factor 2 612 716 3.5E-38 T 09-03-2017 IPR023115 Translation initiation factor IF- 2, domain 3 LS838_RS05900 77134c0de2ba4c475c5bad3e3b159ab4 825 ProSitePatterns PS01176 Initiation factor 2 signature. 777 799 - T 09-03-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 LS838_RS05900 77134c0de2ba4c475c5bad3e3b159ab4 825 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 824 16.625 T 09-03-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 LS838_RS05900 77134c0de2ba4c475c5bad3e3b159ab4 825 SUPERFAMILY SSF52540 320 497 3.36E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05900 77134c0de2ba4c475c5bad3e3b159ab4 825 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 329 484 5.4E-35 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LS838_RS05900 77134c0de2ba4c475c5bad3e3b159ab4 825 Gene3D G3DSA:3.40.50.300 314 486 5.8E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05900 77134c0de2ba4c475c5bad3e3b159ab4 825 SUPERFAMILY SSF52156 603 733 2.88E-39 T 09-03-2017 IPR023115 Translation initiation factor IF- 2, domain 3 LS838_RS05900 77134c0de2ba4c475c5bad3e3b159ab4 825 SUPERFAMILY SSF50447 727 823 7.27E-32 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain LS838_RS05900 77134c0de2ba4c475c5bad3e3b159ab4 825 Pfam PF00009 Elongation factor Tu GTP binding domain 331 487 3.8E-37 T 09-03-2017 LS838_RS05900 77134c0de2ba4c475c5bad3e3b159ab4 825 Gene3D G3DSA:2.40.30.10 497 590 1.3E-22 T 09-03-2017 LS838_RS05900 77134c0de2ba4c475c5bad3e3b159ab4 825 Gene3D G3DSA:2.40.30.10 727 824 1.7E-34 T 09-03-2017 LS838_RS05900 77134c0de2ba4c475c5bad3e3b159ab4 825 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 238 823 2.0E-247 T 09-03-2017 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 LS838_RS02895 6e36af7eb5968e19fab5c8cbf2b0cc75 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 114 127 1.1E-27 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02895 6e36af7eb5968e19fab5c8cbf2b0cc75 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 235 252 1.1E-27 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02895 6e36af7eb5968e19fab5c8cbf2b0cc75 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 1.1E-27 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02895 6e36af7eb5968e19fab5c8cbf2b0cc75 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 150 168 1.1E-27 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02895 6e36af7eb5968e19fab5c8cbf2b0cc75 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 177 193 1.1E-27 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02895 6e36af7eb5968e19fab5c8cbf2b0cc75 338 Gene3D G3DSA:3.40.50.720 2 164 2.0E-69 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS02895 6e36af7eb5968e19fab5c8cbf2b0cc75 338 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 161 318 3.9E-57 T 09-03-2017 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02895 6e36af7eb5968e19fab5c8cbf2b0cc75 338 SUPERFAMILY SSF55347 156 319 3.87E-57 T 09-03-2017 LS838_RS02895 6e36af7eb5968e19fab5c8cbf2b0cc75 338 SUPERFAMILY SSF51735 1 182 1.39E-56 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS02895 6e36af7eb5968e19fab5c8cbf2b0cc75 338 PIRSF PIRSF000149 1 338 7.0E-120 T 09-03-2017 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02895 6e36af7eb5968e19fab5c8cbf2b0cc75 338 SMART SM00846 3 156 9.3E-87 T 09-03-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02895 6e36af7eb5968e19fab5c8cbf2b0cc75 338 Gene3D G3DSA:3.30.360.10 165 320 4.6E-60 T 09-03-2017 LS838_RS02895 6e36af7eb5968e19fab5c8cbf2b0cc75 338 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 156 4.6E-54 T 09-03-2017 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02895 6e36af7eb5968e19fab5c8cbf2b0cc75 338 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 330 1.4E-126 T 09-03-2017 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS00875 3e89647d2922334901e031208ebb220a 487 SUPERFAMILY SSF56024 268 474 1.1E-44 T 09-03-2017 LS838_RS00875 3e89647d2922334901e031208ebb220a 487 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 9 487 3.0E-145 T 09-03-2017 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 LS838_RS00875 3e89647d2922334901e031208ebb220a 487 Pfam PF13091 PLD-like domain 135 247 6.5E-13 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 LS838_RS00875 3e89647d2922334901e031208ebb220a 487 Pfam PF13091 PLD-like domain 328 454 7.9E-25 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 LS838_RS00875 3e89647d2922334901e031208ebb220a 487 Pfam PF13396 Phospholipase_D-nuclease N-terminal 18 58 7.2E-9 T 09-03-2017 IPR027379 Cardiolipin synthase N-terminal LS838_RS00875 3e89647d2922334901e031208ebb220a 487 SUPERFAMILY SSF56024 106 317 1.04E-50 T 09-03-2017 LS838_RS00875 3e89647d2922334901e031208ebb220a 487 Hamap MF_01916 Cardiolipin synthase. 11 487 39.939 T 09-03-2017 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 LS838_RS00875 3e89647d2922334901e031208ebb220a 487 Gene3D G3DSA:3.30.870.10 111 314 2.1E-46 T 09-03-2017 LS838_RS00875 3e89647d2922334901e031208ebb220a 487 SMART SM00155 216 243 0.16 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 LS838_RS00875 3e89647d2922334901e031208ebb220a 487 SMART SM00155 400 427 6.3E-6 T 09-03-2017 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 LS838_RS00875 3e89647d2922334901e031208ebb220a 487 Gene3D G3DSA:3.30.870.10 315 463 4.1E-33 T 09-03-2017 LS838_RS09920 4157c6781f112dba83cfb94d526b1f1f 461 SMART SM01350 176 458 1.7E-150 T 09-03-2017 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LS838_RS09920 4157c6781f112dba83cfb94d526b1f1f 461 Gene3D G3DSA:3.40.50.720 1 177 3.7E-53 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS09920 4157c6781f112dba83cfb94d526b1f1f 461 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 166 1.2E-48 T 09-03-2017 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 LS838_RS09920 4157c6781f112dba83cfb94d526b1f1f 461 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 176 457 1.8E-108 T 09-03-2017 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LS838_RS09920 4157c6781f112dba83cfb94d526b1f1f 461 SUPERFAMILY SSF51735 3 169 3.24E-48 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS09920 4157c6781f112dba83cfb94d526b1f1f 461 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 116 141 4.1E-72 T 09-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LS838_RS09920 4157c6781f112dba83cfb94d526b1f1f 461 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 165 193 4.1E-72 T 09-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LS838_RS09920 4157c6781f112dba83cfb94d526b1f1f 461 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 2 25 4.1E-72 T 09-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LS838_RS09920 4157c6781f112dba83cfb94d526b1f1f 461 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 247 274 4.1E-72 T 09-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LS838_RS09920 4157c6781f112dba83cfb94d526b1f1f 461 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 63 92 4.1E-72 T 09-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LS838_RS09920 4157c6781f112dba83cfb94d526b1f1f 461 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 347 369 4.1E-72 T 09-03-2017 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LS838_RS09920 4157c6781f112dba83cfb94d526b1f1f 461 SUPERFAMILY SSF48179 174 460 1.76E-104 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LS838_RS09920 4157c6781f112dba83cfb94d526b1f1f 461 Gene3D G3DSA:1.20.5.320 426 459 1.4E-20 T 09-03-2017 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LS838_RS09920 4157c6781f112dba83cfb94d526b1f1f 461 PIRSF PIRSF000109 1 461 7.5E-180 T 09-03-2017 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LS838_RS09920 4157c6781f112dba83cfb94d526b1f1f 461 Gene3D G3DSA:1.10.1040.10 178 422 3.6E-84 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LS838_RS09920 4157c6781f112dba83cfb94d526b1f1f 461 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 3 458 2.5E-175 T 09-03-2017 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 LS838_RS08705 7c2b2e46285cd4a8fff6701e0b2b5167 235 SMART SM00866 89 225 2.4E-23 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LS838_RS08705 7c2b2e46285cd4a8fff6701e0b2b5167 235 Gene3D G3DSA:3.40.1410.10 64 233 1.3E-43 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LS838_RS08705 7c2b2e46285cd4a8fff6701e0b2b5167 235 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 4 232 2.1E-77 T 09-03-2017 IPR012770 Trehalose operon transcriptional repressor LS838_RS08705 7c2b2e46285cd4a8fff6701e0b2b5167 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 6.1E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LS838_RS08705 7c2b2e46285cd4a8fff6701e0b2b5167 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 6.1E-9 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LS838_RS08705 7c2b2e46285cd4a8fff6701e0b2b5167 235 SMART SM00345 8 67 6.1E-12 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LS838_RS08705 7c2b2e46285cd4a8fff6701e0b2b5167 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 1.4E-14 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LS838_RS08705 7c2b2e46285cd4a8fff6701e0b2b5167 235 Gene3D G3DSA:1.10.10.10 4 63 1.8E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS08705 7c2b2e46285cd4a8fff6701e0b2b5167 235 Pfam PF07702 UTRA domain 90 225 1.0E-27 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LS838_RS08705 7c2b2e46285cd4a8fff6701e0b2b5167 235 SUPERFAMILY SSF46785 5 77 2.58E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS08705 7c2b2e46285cd4a8fff6701e0b2b5167 235 SUPERFAMILY SSF64288 55 232 2.04E-35 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LS838_RS05860 ff969c7037fe2b029d0b95294da59d8a 612 SUPERFAMILY SSF54980 301 379 2.16E-18 T 09-03-2017 IPR009022 Elongation factor G, III-V domain LS838_RS05860 ff969c7037fe2b029d0b95294da59d8a 612 SUPERFAMILY SSF54980 408 503 5.28E-25 T 09-03-2017 IPR009022 Elongation factor G, III-V domain LS838_RS05860 ff969c7037fe2b029d0b95294da59d8a 612 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 183 7.9E-19 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LS838_RS05860 ff969c7037fe2b029d0b95294da59d8a 612 Gene3D G3DSA:3.40.50.300 3 199 8.9E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05860 ff969c7037fe2b029d0b95294da59d8a 612 Pfam PF03144 Elongation factor Tu domain 2 214 284 9.4E-13 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 LS838_RS05860 ff969c7037fe2b029d0b95294da59d8a 612 Pfam PF06421 GTP-binding protein LepA C-terminus 497 603 3.5E-43 T 09-03-2017 IPR013842 GTP-binding protein LepA, C-terminal LS838_RS05860 ff969c7037fe2b029d0b95294da59d8a 612 SMART SM00838 407 495 0.004 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain LS838_RS05860 ff969c7037fe2b029d0b95294da59d8a 612 Gene3D G3DSA:2.40.30.10 200 298 1.3E-23 T 09-03-2017 LS838_RS05860 ff969c7037fe2b029d0b95294da59d8a 612 Hamap MF_00071 Elongation factor 4 [lepA]. 1 608 280.768 T 09-03-2017 IPR006297 Elongation factor 4 GO:0005525 LS838_RS05860 ff969c7037fe2b029d0b95294da59d8a 612 Gene3D G3DSA:3.30.70.240 410 499 1.2E-21 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain LS838_RS05860 ff969c7037fe2b029d0b95294da59d8a 612 SUPERFAMILY SSF52540 5 237 1.45E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05860 ff969c7037fe2b029d0b95294da59d8a 612 Gene3D G3DSA:3.30.70.870 301 378 8.3E-26 T 09-03-2017 LS838_RS05860 ff969c7037fe2b029d0b95294da59d8a 612 PRINTS PR00315 GTP-binding elongation factor signature 135 144 1.4E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS05860 ff969c7037fe2b029d0b95294da59d8a 612 PRINTS PR00315 GTP-binding elongation factor signature 15 28 1.4E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS05860 ff969c7037fe2b029d0b95294da59d8a 612 PRINTS PR00315 GTP-binding elongation factor signature 83 93 1.4E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS05860 ff969c7037fe2b029d0b95294da59d8a 612 PRINTS PR00315 GTP-binding elongation factor signature 99 110 1.4E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS05860 ff969c7037fe2b029d0b95294da59d8a 612 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.4E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS05860 ff969c7037fe2b029d0b95294da59d8a 612 TIGRFAM TIGR01393 lepA: elongation factor 4 11 605 8.2E-290 T 09-03-2017 IPR006297 Elongation factor 4 GO:0005525 LS838_RS05860 ff969c7037fe2b029d0b95294da59d8a 612 Pfam PF00009 Elongation factor Tu GTP binding domain 11 190 8.3E-50 T 09-03-2017 LS838_RS05860 ff969c7037fe2b029d0b95294da59d8a 612 Pfam PF00679 Elongation factor G C-terminus 408 494 1.3E-23 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain LS838_RS04870 cce0d8bfbd5509b333713753132fb87e 352 Pfam PF10117 McrBC 5-methylcytosine restriction system component 12 290 5.9E-34 T 09-03-2017 IPR019292 5-methylcytosine restriction system component LS838_RS04870 cce0d8bfbd5509b333713753132fb87e 352 PIRSF PIRSF003109 2 349 1.4E-55 T 09-03-2017 IPR014407 McrBC 5-methylcytosine restriction system component, bacterial LS838_RS09100 6dcb7f18fb95d7882d743f9b052aa515 228 SMART SM00862 150 226 5.1E-23 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LS838_RS09100 6dcb7f18fb95d7882d743f9b052aa515 228 Gene3D G3DSA:3.40.50.2300 1 125 2.0E-38 T 09-03-2017 LS838_RS09100 6dcb7f18fb95d7882d743f9b052aa515 228 Pfam PF00072 Response regulator receiver domain 3 112 1.4E-25 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LS838_RS09100 6dcb7f18fb95d7882d743f9b052aa515 228 Gene3D G3DSA:1.10.10.10 126 227 2.1E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS09100 6dcb7f18fb95d7882d743f9b052aa515 228 SUPERFAMILY SSF52172 1 124 2.42E-37 T 09-03-2017 IPR011006 CheY-like superfamily LS838_RS09100 6dcb7f18fb95d7882d743f9b052aa515 228 SUPERFAMILY SSF46894 125 226 5.95E-27 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LS838_RS09100 6dcb7f18fb95d7882d743f9b052aa515 228 SMART SM00448 1 112 1.3E-40 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LS838_RS09100 6dcb7f18fb95d7882d743f9b052aa515 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 7.5E-24 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LS838_RS00300 d738a0bda9830bcd3c9094f789e32218 161 Pfam PF04545 Sigma-70, region 4 112 158 6.1E-7 T 09-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS00300 d738a0bda9830bcd3c9094f789e32218 161 Gene3D G3DSA:1.10.10.10 101 160 1.6E-5 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS00300 d738a0bda9830bcd3c9094f789e32218 161 SUPERFAMILY SSF88659 101 160 3.55E-9 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS00300 d738a0bda9830bcd3c9094f789e32218 161 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 160 3.3E-13 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05835 7ea3349b5ebd78a44e17efc81f8f7e95 295 SUPERFAMILY SSF161111 4 201 1.07E-52 T 09-03-2017 LS838_RS05835 7ea3349b5ebd78a44e17efc81f8f7e95 295 Gene3D G3DSA:1.20.1510.10 6 200 1.6E-56 T 09-03-2017 IPR027469 Cation efflux protein transmembrane domain LS838_RS05835 7ea3349b5ebd78a44e17efc81f8f7e95 295 SUPERFAMILY SSF160240 204 280 8.5E-14 T 09-03-2017 LS838_RS05835 7ea3349b5ebd78a44e17efc81f8f7e95 295 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 7 279 1.5E-83 T 09-03-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LS838_RS05835 7ea3349b5ebd78a44e17efc81f8f7e95 295 Pfam PF16916 Dimerisation domain of Zinc Transporter 207 278 6.1E-8 T 09-03-2017 IPR027470 Cation efflux protein, cytoplasmic domain LS838_RS05835 7ea3349b5ebd78a44e17efc81f8f7e95 295 Gene3D G3DSA:3.30.70.1350 204 279 2.0E-10 T 09-03-2017 IPR027470 Cation efflux protein, cytoplasmic domain LS838_RS05835 7ea3349b5ebd78a44e17efc81f8f7e95 295 Pfam PF01545 Cation efflux family 13 200 1.3E-44 T 09-03-2017 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 LS838_RS07430 fcc467c6108da239b437f1a1630746ba 583 SUPERFAMILY SSF52922 463 582 1.01E-13 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LS838_RS07430 fcc467c6108da239b437f1a1630746ba 583 ProSitePatterns PS00801 Transketolase signature 1. 34 53 - T 09-03-2017 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 LS838_RS07430 fcc467c6108da239b437f1a1630746ba 583 SUPERFAMILY SSF52518 303 452 4.65E-36 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold LS838_RS07430 fcc467c6108da239b437f1a1630746ba 583 Pfam PF02780 Transketolase, C-terminal domain 462 539 4.4E-9 T 09-03-2017 IPR033248 Transketolase, C-terminal domain LS838_RS07430 fcc467c6108da239b437f1a1630746ba 583 Gene3D G3DSA:3.40.50.970 22 262 3.5E-60 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold LS838_RS07430 fcc467c6108da239b437f1a1630746ba 583 Gene3D G3DSA:3.40.50.920 463 582 1.3E-15 T 09-03-2017 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 LS838_RS07430 fcc467c6108da239b437f1a1630746ba 583 Pfam PF02779 Transketolase, pyrimidine binding domain 303 442 8.0E-17 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain LS838_RS07430 fcc467c6108da239b437f1a1630746ba 583 SUPERFAMILY SSF52518 8 347 9.77E-64 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold LS838_RS07430 fcc467c6108da239b437f1a1630746ba 583 SMART SM00861 284 448 2.8E-25 T 09-03-2017 IPR005475 Transketolase-like, pyrimidine-binding domain LS838_RS07430 fcc467c6108da239b437f1a1630746ba 583 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 9 201 6.0E-75 T 09-03-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 LS838_RS07430 fcc467c6108da239b437f1a1630746ba 583 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 206 248 9.6E-5 T 09-03-2017 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 LS838_RS07430 fcc467c6108da239b437f1a1630746ba 583 Gene3D G3DSA:3.40.50.970 263 447 2.2E-38 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold LS838_RS02840 afc293af0a4af14e99101b54dcfc0edb 352 Gene3D G3DSA:3.60.70.12 9 348 1.7E-121 T 09-03-2017 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 LS838_RS02840 afc293af0a4af14e99101b54dcfc0edb 352 SUPERFAMILY SSF56266 7 344 2.88E-94 T 09-03-2017 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 LS838_RS02840 afc293af0a4af14e99101b54dcfc0edb 352 Pfam PF03576 Peptidase family S58 19 344 4.6E-107 T 09-03-2017 IPR005321 Peptidase S58, DmpA LS838_RS05490 fea93e1dffbe1e6cf09a6753d98f8cd9 204 Gene3D G3DSA:1.10.3540.10 7 202 3.8E-57 T 09-03-2017 IPR023137 DUF1819 domain LS838_RS05490 fea93e1dffbe1e6cf09a6753d98f8cd9 204 Pfam PF08849 Putative inner membrane protein (DUF1819) 9 192 3.2E-56 T 09-03-2017 IPR014948 Protein of unknown function DUF1819, putative inner membrane LS838_RS05785 a03c2b0f6f8fb78fab4839a096d67246 278 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 5 276 4.2E-58 T 09-03-2017 IPR003797 DegV LS838_RS05785 a03c2b0f6f8fb78fab4839a096d67246 278 Pfam PF02645 Uncharacterised protein, DegV family COG1307 4 272 6.8E-52 T 09-03-2017 IPR003797 DegV LS838_RS05785 a03c2b0f6f8fb78fab4839a096d67246 278 Gene3D G3DSA:2.20.28.50 27 63 2.3E-7 T 09-03-2017 LS838_RS05785 a03c2b0f6f8fb78fab4839a096d67246 278 Gene3D G3DSA:3.40.50.10440 1 26 4.6E-19 T 09-03-2017 LS838_RS05785 a03c2b0f6f8fb78fab4839a096d67246 278 Gene3D G3DSA:3.40.50.10440 64 151 4.6E-19 T 09-03-2017 LS838_RS05785 a03c2b0f6f8fb78fab4839a096d67246 278 Gene3D G3DSA:3.30.1180.10 153 276 1.3E-37 T 09-03-2017 LS838_RS05785 a03c2b0f6f8fb78fab4839a096d67246 278 SUPERFAMILY SSF82549 4 277 2.17E-57 T 09-03-2017 LS838_RS01610 c6f8f213e754519b6161bc42d1ab60b6 326 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 8 315 4.2E-120 T 09-03-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 LS838_RS01610 c6f8f213e754519b6161bc42d1ab60b6 326 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 7 315 49.987 T 09-03-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 LS838_RS01610 c6f8f213e754519b6161bc42d1ab60b6 326 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 7 123 9.0E-50 T 09-03-2017 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 LS838_RS01610 c6f8f213e754519b6161bc42d1ab60b6 326 SMART SM01400 7 123 6.9E-78 T 09-03-2017 LS838_RS01610 c6f8f213e754519b6161bc42d1ab60b6 326 Pfam PF14572 Phosphoribosyl synthetase-associated domain 206 314 4.7E-23 T 09-03-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 LS838_RS01610 c6f8f213e754519b6161bc42d1ab60b6 326 Gene3D G3DSA:3.40.50.2020 4 162 1.4E-75 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS01610 c6f8f213e754519b6161bc42d1ab60b6 326 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 131 146 - T 09-03-2017 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 LS838_RS01610 c6f8f213e754519b6161bc42d1ab60b6 326 Gene3D G3DSA:3.40.50.2020 163 289 3.8E-54 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS01610 c6f8f213e754519b6161bc42d1ab60b6 326 SUPERFAMILY SSF53271 72 305 6.63E-64 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS08810 7c70dbd247c969c345746c119bc69693 605 Pfam PF00890 FAD binding domain 139 568 1.1E-43 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS08810 7c70dbd247c969c345746c119bc69693 605 SMART SM00900 15 89 1.3E-8 T 09-03-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 LS838_RS08810 7c70dbd247c969c345746c119bc69693 605 Gene3D G3DSA:3.90.700.10 399 531 2.1E-24 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS08810 7c70dbd247c969c345746c119bc69693 605 SUPERFAMILY SSF51905 124 382 1.43E-39 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS08810 7c70dbd247c969c345746c119bc69693 605 SUPERFAMILY SSF51905 539 604 1.43E-39 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS08810 7c70dbd247c969c345746c119bc69693 605 Pfam PF04205 FMN-binding domain 19 87 6.3E-8 T 09-03-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 LS838_RS08810 7c70dbd247c969c345746c119bc69693 605 Gene3D G3DSA:3.50.50.60 536 600 4.8E-65 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS08810 7c70dbd247c969c345746c119bc69693 605 Gene3D G3DSA:3.50.50.60 124 363 4.8E-65 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS08810 7c70dbd247c969c345746c119bc69693 605 SUPERFAMILY SSF56425 399 540 1.38E-22 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS05575 abc62e9f88d4df87b0f3666597855ebd 612 PIRSF PIRSF002811 2 596 7.2E-172 T 09-03-2017 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 LS838_RS05575 abc62e9f88d4df87b0f3666597855ebd 612 Pfam PF13155 Toprim-like 260 345 7.1E-16 T 09-03-2017 LS838_RS05575 abc62e9f88d4df87b0f3666597855ebd 612 TIGRFAM TIGR01391 dnaG: DNA primase 4 413 9.2E-138 T 09-03-2017 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 LS838_RS05575 abc62e9f88d4df87b0f3666597855ebd 612 Pfam PF10410 DnaB-helicase binding domain of primase 366 420 1.2E-16 T 09-03-2017 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 LS838_RS05575 abc62e9f88d4df87b0f3666597855ebd 612 Pfam PF01807 CHC2 zinc finger 6 100 1.4E-38 T 09-03-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 LS838_RS05575 abc62e9f88d4df87b0f3666597855ebd 612 Hamap MF_00974 DNA primase [dnaG]. 4 587 27.516 T 09-03-2017 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 LS838_RS05575 abc62e9f88d4df87b0f3666597855ebd 612 SUPERFAMILY SSF56731 111 420 2.22E-99 T 09-03-2017 LS838_RS05575 abc62e9f88d4df87b0f3666597855ebd 612 SMART SM00493 257 328 1.5E-10 T 09-03-2017 IPR006171 Toprim domain LS838_RS05575 abc62e9f88d4df87b0f3666597855ebd 612 Pfam PF08275 DNA primase catalytic core, N-terminal domain 123 250 2.5E-39 T 09-03-2017 IPR013264 DNA primase, catalytic core, N-terminal LS838_RS05575 abc62e9f88d4df87b0f3666597855ebd 612 Gene3D G3DSA:3.40.1360.10 239 361 1.9E-36 T 09-03-2017 LS838_RS05575 abc62e9f88d4df87b0f3666597855ebd 612 Gene3D G3DSA:3.90.580.10 3 100 2.4E-40 T 09-03-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 LS838_RS05575 abc62e9f88d4df87b0f3666597855ebd 612 Gene3D G3DSA:3.90.980.10 111 238 1.5E-42 T 09-03-2017 IPR013264 DNA primase, catalytic core, N-terminal LS838_RS05575 abc62e9f88d4df87b0f3666597855ebd 612 SMART SM00400 36 90 2.0E-33 T 09-03-2017 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 LS838_RS05575 abc62e9f88d4df87b0f3666597855ebd 612 SUPERFAMILY SSF57783 4 99 1.19E-36 T 09-03-2017 LS838_RS03810 633bd27882635707bd54ac3df5754919 292 PIRSF PIRSF012524 1 286 8.8E-85 T 09-03-2017 IPR014464 Conserved virulence factor B LS838_RS03810 633bd27882635707bd54ac3df5754919 292 Pfam PF13509 S1 domain 2 62 2.5E-13 T 09-03-2017 LS838_RS03810 633bd27882635707bd54ac3df5754919 292 SMART SM00316 68 148 38.0 T 09-03-2017 IPR022967 RNA-binding domain, S1 LS838_RS03810 633bd27882635707bd54ac3df5754919 292 SMART SM00316 151 213 0.035 T 09-03-2017 IPR022967 RNA-binding domain, S1 LS838_RS03810 633bd27882635707bd54ac3df5754919 292 SUPERFAMILY SSF50249 153 215 5.3E-6 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS00845 549b30e79e778ba1e8503cca99a51594 253 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS00845 549b30e79e778ba1e8503cca99a51594 253 SMART SM00382 35 223 1.9E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS00845 549b30e79e778ba1e8503cca99a51594 253 Gene3D G3DSA:3.40.50.300 10 245 4.2E-82 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00845 549b30e79e778ba1e8503cca99a51594 253 SUPERFAMILY SSF52540 10 244 6.41E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00845 549b30e79e778ba1e8503cca99a51594 253 PIRSF PIRSF039085 7 249 6.5E-105 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LS838_RS00845 549b30e79e778ba1e8503cca99a51594 253 Pfam PF00005 ABC transporter 26 174 4.4E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS01885 b7fc6aa17d789917d3415025c621d5b1 122 Pfam PF00238 Ribosomal protein L14p/L23e 2 122 8.8E-52 T 09-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LS838_RS01885 b7fc6aa17d789917d3415025c621d5b1 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 09-03-2017 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01885 b7fc6aa17d789917d3415025c621d5b1 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 6.1E-54 T 09-03-2017 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 LS838_RS01885 b7fc6aa17d789917d3415025c621d5b1 122 SUPERFAMILY SSF50193 2 122 6.67E-48 T 09-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LS838_RS01885 b7fc6aa17d789917d3415025c621d5b1 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.723 T 09-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LS838_RS01885 b7fc6aa17d789917d3415025c621d5b1 122 Gene3D G3DSA:2.40.150.20 2 122 7.1E-51 T 09-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LS838_RS01885 b7fc6aa17d789917d3415025c621d5b1 122 SMART SM01374 1 122 1.2E-80 T 09-03-2017 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 LS838_RS08300 c01c53406a8178e5dd7549ec8b9cc711 187 Gene3D G3DSA:1.10.10.10 118 184 3.9E-9 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS08300 c01c53406a8178e5dd7549ec8b9cc711 187 SUPERFAMILY SSF88659 118 182 2.06E-8 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS08300 c01c53406a8178e5dd7549ec8b9cc711 187 Pfam PF04542 Sigma-70 region 2 31 87 9.7E-12 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS08300 c01c53406a8178e5dd7549ec8b9cc711 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 181 2.9E-19 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS08300 c01c53406a8178e5dd7549ec8b9cc711 187 Gene3D G3DSA:1.10.1740.10 8 88 1.5E-13 T 09-03-2017 LS838_RS08300 c01c53406a8178e5dd7549ec8b9cc711 187 SUPERFAMILY SSF88946 3 95 3.92E-14 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS01215 66ff34e8e7277be49f8d124e05d87179 229 SUPERFAMILY SSF53254 1 224 2.17E-72 T 09-03-2017 IPR029033 Histidine phosphatase superfamily LS838_RS01215 66ff34e8e7277be49f8d124e05d87179 229 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 09-03-2017 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 LS838_RS01215 66ff34e8e7277be49f8d124e05d87179 229 SMART SM00855 3 189 5.7E-25 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LS838_RS01215 66ff34e8e7277be49f8d124e05d87179 229 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 123 1.7E-27 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LS838_RS01215 66ff34e8e7277be49f8d124e05d87179 229 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 130 221 5.5E-5 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LS838_RS01215 66ff34e8e7277be49f8d124e05d87179 229 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 227 4.6E-109 T 09-03-2017 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 LS838_RS01215 66ff34e8e7277be49f8d124e05d87179 229 Gene3D G3DSA:3.40.50.1240 1 224 1.0E-92 T 09-03-2017 IPR029033 Histidine phosphatase superfamily LS838_RS01215 66ff34e8e7277be49f8d124e05d87179 229 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 44.605 T 09-03-2017 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 LS838_RS05595 c5b9e001ff1275db2a3b5537b744051e 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 10 279 4.2E-96 T 09-03-2017 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 LS838_RS05595 c5b9e001ff1275db2a3b5537b744051e 301 SUPERFAMILY SSF54814 182 297 7.85E-42 T 09-03-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 LS838_RS05595 c5b9e001ff1275db2a3b5537b744051e 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 61 76 1.8E-6 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS05595 c5b9e001ff1275db2a3b5537b744051e 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 12 32 1.8E-6 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS05595 c5b9e001ff1275db2a3b5537b744051e 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 168 8.4E-31 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LS838_RS05595 c5b9e001ff1275db2a3b5537b744051e 301 Pfam PF07650 KH domain 208 285 4.6E-19 T 09-03-2017 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS05595 c5b9e001ff1275db2a3b5537b744051e 301 Gene3D G3DSA:3.40.50.300 6 191 6.7E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05595 c5b9e001ff1275db2a3b5537b744051e 301 SUPERFAMILY SSF52540 12 203 5.04E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05595 c5b9e001ff1275db2a3b5537b744051e 301 Gene3D G3DSA:3.30.300.20 192 293 1.5E-41 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta LS838_RS05595 c5b9e001ff1275db2a3b5537b744051e 301 Pfam PF01926 50S ribosome-binding GTPase 12 125 4.2E-26 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS05595 c5b9e001ff1275db2a3b5537b744051e 301 Hamap MF_00367 GTPase Era [era]. 7 296 37.199 T 09-03-2017 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 LS838_RS01300 af92e6e5fd19e2f54af9d64d1370f1d0 110 Gene3D G3DSA:3.10.105.10 33 79 1.5E-4 T 09-03-2017 LS838_RS01300 af92e6e5fd19e2f54af9d64d1370f1d0 110 SUPERFAMILY SSF53850 38 105 1.25E-7 T 09-03-2017 LS838_RS03375 85d462fdd320e7fef5cf97982f6176e9 320 Pfam PF00953 Glycosyl transferase family 4 80 245 4.2E-32 T 09-03-2017 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 LS838_RS03375 85d462fdd320e7fef5cf97982f6176e9 320 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 15 310 3.5E-87 T 09-03-2017 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 LS838_RS03375 85d462fdd320e7fef5cf97982f6176e9 320 ProSitePatterns PS01348 MraY family signature 2. 166 177 - T 09-03-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 LS838_RS03375 85d462fdd320e7fef5cf97982f6176e9 320 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 3 320 21.54 T 09-03-2017 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 LS838_RS03375 85d462fdd320e7fef5cf97982f6176e9 320 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 46 58 6.6E-5 T 09-03-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 LS838_RS00815 72a2e592805625d90ce6cb2326e2a3ef 385 Pfam PF03600 Citrate transporter 48 311 1.4E-12 T 09-03-2017 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 LS838_RS01425 8fe995556626684894178b194b096ef4 464 ProSitePatterns PS00218 Amino acid permeases signature. 43 74 - T 09-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LS838_RS01425 8fe995556626684894178b194b096ef4 464 Pfam PF00324 Amino acid permease 18 457 1.7E-117 T 09-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LS838_RS01425 8fe995556626684894178b194b096ef4 464 PIRSF PIRSF006060 1 463 1.3E-80 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LS838_RS00340 a712713ff84b4b18a2103824a4585990 239 Pfam PF00230 Major intrinsic protein 3 230 3.1E-28 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LS838_RS00340 a712713ff84b4b18a2103824a4585990 239 Gene3D G3DSA:1.20.1080.10 2 236 3.6E-60 T 09-03-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 LS838_RS00340 a712713ff84b4b18a2103824a4585990 239 SUPERFAMILY SSF81338 2 236 2.49E-52 T 09-03-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 LS838_RS00340 a712713ff84b4b18a2103824a4585990 239 PRINTS PR00783 Major intrinsic protein family signature 78 97 7.1E-23 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LS838_RS00340 a712713ff84b4b18a2103824a4585990 239 PRINTS PR00783 Major intrinsic protein family signature 2 21 7.1E-23 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LS838_RS00340 a712713ff84b4b18a2103824a4585990 239 PRINTS PR00783 Major intrinsic protein family signature 166 188 7.1E-23 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LS838_RS00340 a712713ff84b4b18a2103824a4585990 239 PRINTS PR00783 Major intrinsic protein family signature 136 154 7.1E-23 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LS838_RS00340 a712713ff84b4b18a2103824a4585990 239 PRINTS PR00783 Major intrinsic protein family signature 214 234 7.1E-23 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LS838_RS04815 f9c34c81e9e132884adf25914aec99c1 484 SUPERFAMILY SSF56425 269 423 5.49E-29 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS04815 f9c34c81e9e132884adf25914aec99c1 484 Gene3D G3DSA:3.50.50.60 419 483 4.7E-63 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS04815 f9c34c81e9e132884adf25914aec99c1 484 Gene3D G3DSA:3.50.50.60 3 238 4.7E-63 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS04815 f9c34c81e9e132884adf25914aec99c1 484 Gene3D G3DSA:3.90.700.10 268 413 7.9E-31 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS04815 f9c34c81e9e132884adf25914aec99c1 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 1.1E-6 T 09-03-2017 LS838_RS04815 f9c34c81e9e132884adf25914aec99c1 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 439 454 1.1E-6 T 09-03-2017 LS838_RS04815 f9c34c81e9e132884adf25914aec99c1 484 SUPERFAMILY SSF51905 6 245 2.57E-41 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS04815 f9c34c81e9e132884adf25914aec99c1 484 SUPERFAMILY SSF51905 422 484 2.57E-41 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS04815 f9c34c81e9e132884adf25914aec99c1 484 Pfam PF00890 FAD binding domain 10 454 4.1E-54 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS00630 37108a5b924c1262e4ec971c568b1d50 620 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 474 598 1.3E-53 T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LS838_RS00630 37108a5b924c1262e4ec971c568b1d50 620 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 537 549 - T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LS838_RS00630 37108a5b924c1262e4ec971c568b1d50 620 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 10 27 - T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LS838_RS00630 37108a5b924c1262e4ec971c568b1d50 620 Pfam PF00367 phosphotransferase system, EIIB 2 32 2.6E-13 T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LS838_RS00630 37108a5b924c1262e4ec971c568b1d50 620 Gene3D G3DSA:2.70.70.10 471 619 3.2E-64 T 09-03-2017 LS838_RS00630 37108a5b924c1262e4ec971c568b1d50 620 Pfam PF02378 Phosphotransferase system, EIIC 102 380 1.5E-30 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LS838_RS00630 37108a5b924c1262e4ec971c568b1d50 620 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 1 619 2.8E-214 T 09-03-2017 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 LS838_RS00630 37108a5b924c1262e4ec971c568b1d50 620 SUPERFAMILY SSF51261 471 618 2.09E-56 T 09-03-2017 IPR011055 Duplicated hybrid motif LS838_RS00630 37108a5b924c1262e4ec971c568b1d50 620 Gene3D G3DSA:3.30.1360.60 1 67 6.8E-25 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LS838_RS00630 37108a5b924c1262e4ec971c568b1d50 620 SUPERFAMILY SSF55604 2 69 3.92E-20 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LS838_RS00630 37108a5b924c1262e4ec971c568b1d50 620 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 475 595 1.0E-46 T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LS838_RS02620 6a357692d0e0a36b49daac84ab22bcf1 92 Gene3D G3DSA:3.40.1720.10 1 92 1.2E-34 T 09-03-2017 LS838_RS02620 6a357692d0e0a36b49daac84ab22bcf1 92 Pfam PF08860 Domain of unknown function (DUF1827) 1 91 1.1E-35 T 09-03-2017 IPR014959 Protein of unknown function DUF1827 LS838_RS00890 720853747719cfac5e9b4c0ec78bfcea 318 Pfam PF06207 Protein of unknown function (DUF1002) 37 273 6.7E-61 T 09-03-2017 IPR009343 Protein of unknown function DUF1002 LS838_RS01500 8505a041c328b6da3a84f4cd314589b3 724 Gene3D G3DSA:1.20.1560.10 159 463 1.7E-67 T 09-03-2017 LS838_RS01500 8505a041c328b6da3a84f4cd314589b3 724 Pfam PF00005 ABC transporter 502 652 1.2E-33 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS01500 8505a041c328b6da3a84f4cd314589b3 724 Pfam PF03412 Peptidase C39 family 9 143 4.9E-37 T 09-03-2017 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 LS838_RS01500 8505a041c328b6da3a84f4cd314589b3 724 Pfam PF00664 ABC transporter transmembrane region 172 439 8.9E-51 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS01500 8505a041c328b6da3a84f4cd314589b3 724 SUPERFAMILY SSF52540 476 718 2.0E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01500 8505a041c328b6da3a84f4cd314589b3 724 TIGRFAM TIGR01193 bacteriocin_ABC: ABC-type bacteriocin transporter 12 718 1.3E-265 T 09-03-2017 IPR005897 Peptidase C39, ABC-type bacteriocin transporter GO:0008234|GO:0016020|GO:0022885|GO:0043213 LS838_RS01500 8505a041c328b6da3a84f4cd314589b3 724 Gene3D G3DSA:3.40.50.300 487 714 2.7E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01500 8505a041c328b6da3a84f4cd314589b3 724 ProSitePatterns PS00211 ABC transporters family signature. 624 638 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS01500 8505a041c328b6da3a84f4cd314589b3 724 SMART SM00382 511 696 1.7E-16 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS01500 8505a041c328b6da3a84f4cd314589b3 724 SUPERFAMILY SSF90123 158 463 8.89E-62 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS01500 8505a041c328b6da3a84f4cd314589b3 724 Gene3D G3DSA:3.90.70.10 14 141 3.1E-14 T 09-03-2017 LS838_RS04805 a2ae7fd4dc16096e92a83bca5f714e2a 88 Gene3D G3DSA:3.40.630.30 1 87 1.5E-23 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS04805 a2ae7fd4dc16096e92a83bca5f714e2a 88 SUPERFAMILY SSF55729 6 84 4.9E-17 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS04805 a2ae7fd4dc16096e92a83bca5f714e2a 88 Pfam PF14542 GCN5-related N-acetyl-transferase 16 86 1.1E-17 T 09-03-2017 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase LS838_RS01150 19e777e8184c025cbd3a7377230423ce 112 Gene3D G3DSA:3.40.30.10 3 51 4.3E-7 T 09-03-2017 IPR012336 Thioredoxin-like fold LS838_RS01150 19e777e8184c025cbd3a7377230423ce 112 SUPERFAMILY SSF52833 1 46 1.0E-6 T 09-03-2017 IPR012336 Thioredoxin-like fold LS838_RS00850 2461c76ff094793bb302585e9fb87243 527 SUPERFAMILY SSF161098 293 494 1.7E-42 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS00850 2461c76ff094793bb302585e9fb87243 527 Gene3D G3DSA:1.10.3720.10 292 505 1.0E-50 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS00850 2461c76ff094793bb302585e9fb87243 527 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 342 505 2.4E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS00850 2461c76ff094793bb302585e9fb87243 527 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 264 1.5E-37 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LS838_RS00850 2461c76ff094793bb302585e9fb87243 527 SUPERFAMILY SSF53850 1 262 1.04E-45 T 09-03-2017 LS838_RS00850 2461c76ff094793bb302585e9fb87243 527 Gene3D G3DSA:3.40.190.10 123 206 3.1E-8 T 09-03-2017 LS838_RS00850 2461c76ff094793bb302585e9fb87243 527 Gene3D G3DSA:3.40.190.10 30 122 2.1E-35 T 09-03-2017 LS838_RS00850 2461c76ff094793bb302585e9fb87243 527 Gene3D G3DSA:3.40.190.10 233 268 2.1E-35 T 09-03-2017 LS838_RS00850 2461c76ff094793bb302585e9fb87243 527 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 293 400 8.5E-20 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LS838_RS00850 2461c76ff094793bb302585e9fb87243 527 SMART SM00062 33 269 4.4E-33 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LS838_RS07860 252c223bba64f23be8ec6a4b38844350 485 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 23 460 5.0E-148 T 09-03-2017 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 LS838_RS07860 252c223bba64f23be8ec6a4b38844350 485 Gene3D G3DSA:2.60.120.560 311 464 1.4E-30 T 09-03-2017 IPR013189 Glycosyl hydrolase family 32, C-terminal LS838_RS07860 252c223bba64f23be8ec6a4b38844350 485 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 37 50 - T 09-03-2017 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 LS838_RS07860 252c223bba64f23be8ec6a4b38844350 485 SMART SM00640 37 450 3.9E-108 T 09-03-2017 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 LS838_RS07860 252c223bba64f23be8ec6a4b38844350 485 Gene3D G3DSA:2.115.10.20 43 310 1.4E-18 T 09-03-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain LS838_RS07860 252c223bba64f23be8ec6a4b38844350 485 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 379 450 1.8E-8 T 09-03-2017 IPR013189 Glycosyl hydrolase family 32, C-terminal LS838_RS07860 252c223bba64f23be8ec6a4b38844350 485 SUPERFAMILY SSF49899 339 483 2.37E-20 T 09-03-2017 IPR013320 Concanavalin A-like lectin/glucanase domain LS838_RS07860 252c223bba64f23be8ec6a4b38844350 485 SUPERFAMILY SSF75005 29 340 4.85E-87 T 09-03-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain LS838_RS07860 252c223bba64f23be8ec6a4b38844350 485 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 37 339 2.2E-87 T 09-03-2017 IPR013148 Glycosyl hydrolase family 32, N-terminal LS838_RS06570 5b5f0c037d871cecfb0ab344f71aab05 349 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 23 90 2.2E-20 T 09-03-2017 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 LS838_RS06570 5b5f0c037d871cecfb0ab344f71aab05 349 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 41 345 2.8E-102 T 09-03-2017 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 LS838_RS06570 5b5f0c037d871cecfb0ab344f71aab05 349 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 11 344 46.202 T 09-03-2017 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 LS838_RS06570 5b5f0c037d871cecfb0ab344f71aab05 349 SUPERFAMILY SSF46589 15 102 6.28E-20 T 09-03-2017 IPR010978 tRNA-binding arm GO:0000166 LS838_RS06570 5b5f0c037d871cecfb0ab344f71aab05 349 Gene3D G3DSA:3.30.930.10 12 345 5.3E-127 T 09-03-2017 LS838_RS06570 5b5f0c037d871cecfb0ab344f71aab05 349 Pfam PF01409 tRNA synthetases class II core domain (F) 94 344 2.8E-99 T 09-03-2017 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 LS838_RS06570 5b5f0c037d871cecfb0ab344f71aab05 349 SUPERFAMILY SSF55681 94 345 6.63E-79 T 09-03-2017 LS838_RS03170 4374ef04b8fd3f78091d9d0f90a69cda 451 Pfam PF08353 Domain of unknown function (DUF1727) 323 433 3.9E-36 T 09-03-2017 IPR013564 Domain of unknown function DUF1727 LS838_RS03170 4374ef04b8fd3f78091d9d0f90a69cda 451 Gene3D G3DSA:3.40.1190.10 227 301 7.9E-42 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LS838_RS03170 4374ef04b8fd3f78091d9d0f90a69cda 451 Gene3D G3DSA:3.40.1190.10 39 190 7.9E-42 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LS838_RS03170 4374ef04b8fd3f78091d9d0f90a69cda 451 Pfam PF08245 Mur ligase middle domain 54 285 1.4E-15 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LS838_RS03170 4374ef04b8fd3f78091d9d0f90a69cda 451 SUPERFAMILY SSF53623 40 191 1.03E-32 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LS838_RS03170 4374ef04b8fd3f78091d9d0f90a69cda 451 SUPERFAMILY SSF53623 228 300 1.03E-32 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LS838_RS05210 ee912beaff8f9409b36584f834e8e1a3 328 SUPERFAMILY SSF54506 4 140 3.45E-23 T 09-03-2017 LS838_RS05210 ee912beaff8f9409b36584f834e8e1a3 328 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 5 277 3.2E-46 T 09-03-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 LS838_RS05210 ee912beaff8f9409b36584f834e8e1a3 328 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 2 295 26.631 T 09-03-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 LS838_RS05210 ee912beaff8f9409b36584f834e8e1a3 328 Gene3D G3DSA:3.10.310.10 129 277 3.3E-30 T 09-03-2017 LS838_RS05210 ee912beaff8f9409b36584f834e8e1a3 328 Pfam PF01678 Diaminopimelate epimerase 168 281 2.0E-9 T 09-03-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 LS838_RS05210 ee912beaff8f9409b36584f834e8e1a3 328 Pfam PF01678 Diaminopimelate epimerase 5 115 5.2E-17 T 09-03-2017 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 LS838_RS05210 ee912beaff8f9409b36584f834e8e1a3 328 SUPERFAMILY SSF54506 160 291 1.73E-23 T 09-03-2017 LS838_RS05210 ee912beaff8f9409b36584f834e8e1a3 328 Gene3D G3DSA:3.10.310.10 3 128 2.0E-28 T 09-03-2017 LS838_RS05210 ee912beaff8f9409b36584f834e8e1a3 328 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 71 85 - T 09-03-2017 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 LS838_RS06375 e94b1f789df014e2cc7f82e0bb95a1a5 740 SUPERFAMILY SSF55326 397 570 1.05E-51 T 09-03-2017 LS838_RS06375 e94b1f789df014e2cc7f82e0bb95a1a5 740 SUPERFAMILY SSF56042 204 430 2.39E-51 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain LS838_RS06375 e94b1f789df014e2cc7f82e0bb95a1a5 740 Gene3D G3DSA:3.30.1330.10 419 566 6.3E-53 T 09-03-2017 IPR016188 PurM-like, N-terminal domain LS838_RS06375 e94b1f789df014e2cc7f82e0bb95a1a5 740 Gene3D G3DSA:3.30.1330.10 54 198 9.0E-48 T 09-03-2017 IPR016188 PurM-like, N-terminal domain LS838_RS06375 e94b1f789df014e2cc7f82e0bb95a1a5 740 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 21 736 1.8E-273 T 09-03-2017 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 LS838_RS06375 e94b1f789df014e2cc7f82e0bb95a1a5 740 Pfam PF02769 AIR synthase related protein, C-terminal domain 576 706 8.1E-17 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain LS838_RS06375 e94b1f789df014e2cc7f82e0bb95a1a5 740 Pfam PF02769 AIR synthase related protein, C-terminal domain 206 359 2.7E-31 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain LS838_RS06375 e94b1f789df014e2cc7f82e0bb95a1a5 740 SUPERFAMILY SSF55326 17 199 2.99E-49 T 09-03-2017 LS838_RS06375 e94b1f789df014e2cc7f82e0bb95a1a5 740 PIRSF PIRSF001587 2 739 2.2E-285 T 09-03-2017 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 LS838_RS06375 e94b1f789df014e2cc7f82e0bb95a1a5 740 SUPERFAMILY SSF56042 573 737 2.54E-33 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain LS838_RS06375 e94b1f789df014e2cc7f82e0bb95a1a5 740 Pfam PF00586 AIR synthase related protein, N-terminal domain 459 563 1.2E-20 T 09-03-2017 IPR016188 PurM-like, N-terminal domain LS838_RS06375 e94b1f789df014e2cc7f82e0bb95a1a5 740 Pfam PF00586 AIR synthase related protein, N-terminal domain 91 192 3.4E-22 T 09-03-2017 IPR016188 PurM-like, N-terminal domain LS838_RS06375 e94b1f789df014e2cc7f82e0bb95a1a5 740 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 740 294.786 T 09-03-2017 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 LS838_RS06375 e94b1f789df014e2cc7f82e0bb95a1a5 740 Gene3D G3DSA:3.90.650.10 217 361 2.3E-5 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain LS838_RS06375 e94b1f789df014e2cc7f82e0bb95a1a5 740 Gene3D G3DSA:3.90.650.10 576 663 9.2E-4 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain LS838_RS06565 0d37fcad02c78304034dd38241f25da4 803 SUPERFAMILY SSF55681 475 697 1.09E-41 T 09-03-2017 LS838_RS06565 0d37fcad02c78304034dd38241f25da4 803 Pfam PF01588 Putative tRNA binding domain 46 126 2.3E-17 T 09-03-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 LS838_RS06565 0d37fcad02c78304034dd38241f25da4 803 SMART SM00896 710 803 1.0E-41 T 09-03-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 LS838_RS06565 0d37fcad02c78304034dd38241f25da4 803 SUPERFAMILY SSF56037 215 402 1.18E-62 T 09-03-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 LS838_RS06565 0d37fcad02c78304034dd38241f25da4 803 Gene3D G3DSA:3.50.40.10 229 400 3.2E-70 T 09-03-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 LS838_RS06565 0d37fcad02c78304034dd38241f25da4 803 SUPERFAMILY SSF46955 412 483 2.93E-19 T 09-03-2017 IPR009061 Putative DNA-binding domain LS838_RS06565 0d37fcad02c78304034dd38241f25da4 803 SUPERFAMILY SSF50249 42 197 7.35E-37 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS06565 0d37fcad02c78304034dd38241f25da4 803 SUPERFAMILY SSF54991 706 803 9.94E-28 T 09-03-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 LS838_RS06565 0d37fcad02c78304034dd38241f25da4 803 SMART SM00874 411 479 1.2E-23 T 09-03-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 LS838_RS06565 0d37fcad02c78304034dd38241f25da4 803 Pfam PF03483 B3/4 domain 221 389 1.5E-59 T 09-03-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 LS838_RS06565 0d37fcad02c78304034dd38241f25da4 803 Gene3D G3DSA:3.30.930.10 503 697 1.4E-52 T 09-03-2017 LS838_RS06565 0d37fcad02c78304034dd38241f25da4 803 Gene3D G3DSA:3.30.56.10 1 39 1.2E-17 T 09-03-2017 LS838_RS06565 0d37fcad02c78304034dd38241f25da4 803 Gene3D G3DSA:2.40.50.140 43 228 2.3E-44 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS06565 0d37fcad02c78304034dd38241f25da4 803 Gene3D G3DSA:3.30.70.380 712 803 1.6E-29 T 09-03-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 LS838_RS06565 0d37fcad02c78304034dd38241f25da4 803 Pfam PF03484 tRNA synthetase B5 domain 414 479 1.8E-15 T 09-03-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 LS838_RS06565 0d37fcad02c78304034dd38241f25da4 803 SMART SM00873 220 394 2.5E-80 T 09-03-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 LS838_RS06565 0d37fcad02c78304034dd38241f25da4 803 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 803 1.0E-238 T 09-03-2017 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 LS838_RS06565 0d37fcad02c78304034dd38241f25da4 803 Pfam PF03147 Ferredoxin-fold anticodon binding domain 710 803 1.5E-28 T 09-03-2017 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 LS838_RS06565 0d37fcad02c78304034dd38241f25da4 803 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 797 42.221 T 09-03-2017 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 LS838_RS06565 0d37fcad02c78304034dd38241f25da4 803 Gene3D G3DSA:3.30.56.20 412 483 3.0E-23 T 09-03-2017 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 LS838_RS06365 0a42daa4976fdc7e3fd104fa37abc0e2 344 Gene3D G3DSA:3.30.1330.10 17 165 3.1E-61 T 09-03-2017 IPR016188 PurM-like, N-terminal domain LS838_RS06365 0a42daa4976fdc7e3fd104fa37abc0e2 344 Gene3D G3DSA:3.90.650.10 172 342 1.7E-64 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain LS838_RS06365 0a42daa4976fdc7e3fd104fa37abc0e2 344 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 2 343 44.934 T 09-03-2017 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LS838_RS06365 0a42daa4976fdc7e3fd104fa37abc0e2 344 Pfam PF02769 AIR synthase related protein, C-terminal domain 172 339 3.2E-31 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain LS838_RS06365 0a42daa4976fdc7e3fd104fa37abc0e2 344 SUPERFAMILY SSF55326 3 165 1.94E-50 T 09-03-2017 LS838_RS06365 0a42daa4976fdc7e3fd104fa37abc0e2 344 SUPERFAMILY SSF56042 171 341 5.53E-54 T 09-03-2017 IPR010918 AIR synthase-related protein, C-terminal domain LS838_RS06365 0a42daa4976fdc7e3fd104fa37abc0e2 344 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 3 334 3.5E-133 T 09-03-2017 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LS838_RS06365 0a42daa4976fdc7e3fd104fa37abc0e2 344 Pfam PF00586 AIR synthase related protein, N-terminal domain 57 159 1.2E-16 T 09-03-2017 IPR016188 PurM-like, N-terminal domain LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 SMART SM00436 134 222 1.9E-49 T 09-03-2017 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 SUPERFAMILY SSF56712 33 615 3.01E-192 T 09-03-2017 IPR023405 DNA topoisomerase, type IA, core domain LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 SMART SM00493 33 133 5.5E-32 T 09-03-2017 IPR006171 Toprim domain LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 35 637 7.1E-240 T 09-03-2017 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 310 333 - T 09-03-2017 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 107 120 6.8E-36 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 324 333 6.8E-36 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 401 417 6.8E-36 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 192 210 6.8E-36 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 499 513 6.8E-36 T 09-03-2017 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 Pfam PF01131 DNA topoisomerase 158 574 8.8E-133 T 09-03-2017 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 604 639 1.3E-13 T 09-03-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 643 681 2.9E-15 T 09-03-2017 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 Hamap MF_00952 DNA topoisomerase 1 [topA]. 33 659 54.335 T 09-03-2017 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 SMART SM00437 273 536 2.5E-107 T 09-03-2017 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 Pfam PF01751 Toprim domain 35 143 1.3E-29 T 09-03-2017 IPR006171 Toprim domain LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 Gene3D G3DSA:2.70.20.10 214 345 2.2E-31 T 09-03-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 Gene3D G3DSA:2.70.20.10 347 482 4.7E-34 T 09-03-2017 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 Gene3D G3DSA:3.30.65.10 600 645 3.3E-16 T 09-03-2017 LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 Gene3D G3DSA:1.10.460.10 646 650 3.0E-59 T 09-03-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 Gene3D G3DSA:1.10.460.10 165 212 3.0E-59 T 09-03-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 Gene3D G3DSA:1.10.460.10 483 587 3.0E-59 T 09-03-2017 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 LS838_RS05695 690a640a58d0071ad9575b9dc5b13b74 724 Gene3D G3DSA:3.40.50.140 32 164 1.4E-45 T 09-03-2017 IPR006171 Toprim domain LS838_RS07370 c7fbfc33f7056568a462c20c6e4da38b 430 SUPERFAMILY SSF53850 34 420 1.43E-72 T 09-03-2017 LS838_RS07370 c7fbfc33f7056568a462c20c6e4da38b 430 Pfam PF13416 Bacterial extracellular solute-binding protein 54 356 2.5E-37 T 09-03-2017 LS838_RS07370 c7fbfc33f7056568a462c20c6e4da38b 430 Gene3D G3DSA:3.40.190.10 151 326 1.8E-38 T 09-03-2017 LS838_RS07370 c7fbfc33f7056568a462c20c6e4da38b 430 Gene3D G3DSA:3.40.190.10 327 388 4.7E-17 T 09-03-2017 LS838_RS07370 c7fbfc33f7056568a462c20c6e4da38b 430 Gene3D G3DSA:3.40.190.10 7 145 4.7E-17 T 09-03-2017 LS838_RS01635 60036a1db083af4799574ef12dfef069 423 Gene3D G3DSA:3.65.10.10 221 416 2.3E-49 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 LS838_RS01635 60036a1db083af4799574ef12dfef069 423 SUPERFAMILY SSF55205 1 418 4.41E-117 T 09-03-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 LS838_RS01635 60036a1db083af4799574ef12dfef069 423 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 2.9E-139 T 09-03-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS01635 60036a1db083af4799574ef12dfef069 423 Gene3D G3DSA:3.65.10.10 21 220 1.5E-57 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 LS838_RS01635 60036a1db083af4799574ef12dfef069 423 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 36.275 T 09-03-2017 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS01635 60036a1db083af4799574ef12dfef069 423 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 409 1.4E-74 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 LS838_RS06120 e3353cd7188f903590cc589bb54ff36b 593 Gene3D G3DSA:3.40.190.10 238 353 3.4E-26 T 09-03-2017 LS838_RS06120 e3353cd7188f903590cc589bb54ff36b 593 SUPERFAMILY SSF53850 51 588 4.34E-92 T 09-03-2017 LS838_RS06120 e3353cd7188f903590cc589bb54ff36b 593 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 110 507 5.4E-63 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain LS838_RS06120 e3353cd7188f903590cc589bb54ff36b 593 Gene3D G3DSA:3.10.105.10 354 557 8.4E-37 T 09-03-2017 LS838_RS06120 e3353cd7188f903590cc589bb54ff36b 593 Gene3D G3DSA:3.90.76.10 77 237 6.7E-23 T 09-03-2017 LS838_RS06120 e3353cd7188f903590cc589bb54ff36b 593 PIRSF PIRSF002741 2 590 1.1E-63 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LS838_RS06830 fa2e8a5d5688dc45b604f604a0466e9c 316 Gene3D G3DSA:1.10.3210.10 161 288 3.1E-5 T 09-03-2017 IPR006674 HD domain LS838_RS06830 fa2e8a5d5688dc45b604f604a0466e9c 316 Pfam PF01966 HD domain 163 280 1.0E-9 T 09-03-2017 IPR006674 HD domain LS838_RS06830 fa2e8a5d5688dc45b604f604a0466e9c 316 SUPERFAMILY SSF109604 147 287 6.91E-13 T 09-03-2017 LS838_RS06830 fa2e8a5d5688dc45b604f604a0466e9c 316 Gene3D G3DSA:2.40.50.140 33 93 3.7E-5 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS06950 e544b90deeb357d465caf4912a460b5a 398 Gene3D G3DSA:3.30.300.10 255 394 4.2E-70 T 09-03-2017 LS838_RS06950 e544b90deeb357d465caf4912a460b5a 398 Gene3D G3DSA:3.30.300.10 11 145 3.7E-47 T 09-03-2017 LS838_RS06950 e544b90deeb357d465caf4912a460b5a 398 SUPERFAMILY SSF55973 120 243 8.63E-50 T 09-03-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LS838_RS06950 e544b90deeb357d465caf4912a460b5a 398 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 394 57.669 T 09-03-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LS838_RS06950 e544b90deeb357d465caf4912a460b5a 398 SUPERFAMILY SSF55973 244 394 1.22E-69 T 09-03-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LS838_RS06950 e544b90deeb357d465caf4912a460b5a 398 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 270 278 - T 09-03-2017 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LS838_RS06950 e544b90deeb357d465caf4912a460b5a 398 Gene3D G3DSA:3.30.300.10 146 244 1.2E-45 T 09-03-2017 LS838_RS06950 e544b90deeb357d465caf4912a460b5a 398 SUPERFAMILY SSF55973 3 109 2.12E-46 T 09-03-2017 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LS838_RS06950 e544b90deeb357d465caf4912a460b5a 398 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 126 136 - T 09-03-2017 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LS838_RS06950 e544b90deeb357d465caf4912a460b5a 398 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 7.0E-43 T 09-03-2017 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LS838_RS06950 e544b90deeb357d465caf4912a460b5a 398 PIRSF PIRSF000497 1 395 8.5E-176 T 09-03-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LS838_RS06950 e544b90deeb357d465caf4912a460b5a 398 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 393 1.3E-181 T 09-03-2017 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LS838_RS06950 e544b90deeb357d465caf4912a460b5a 398 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 244 383 4.9E-70 T 09-03-2017 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LS838_RS06950 e544b90deeb357d465caf4912a460b5a 398 Pfam PF02772 S-adenosylmethionine synthetase, central domain 124 242 6.2E-46 T 09-03-2017 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 LS838_RS04095 0f75ccb4103a147b784ad48d686a22dc 81 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 37 76 1.0E-6 T 09-03-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LS838_RS04095 0f75ccb4103a147b784ad48d686a22dc 81 SUPERFAMILY SSF47336 1 79 1.06E-16 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain LS838_RS04095 0f75ccb4103a147b784ad48d686a22dc 81 Gene3D G3DSA:1.10.1200.10 1 80 2.2E-20 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain LS838_RS04095 0f75ccb4103a147b784ad48d686a22dc 81 Pfam PF00550 Phosphopantetheine attachment site 9 73 1.1E-8 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain LS838_RS04095 0f75ccb4103a147b784ad48d686a22dc 81 Hamap MF_01217 Acyl carrier protein [acpP]. 5 77 16.841 T 09-03-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LS838_RS03575 96049b08db12dbac336fe8d65a140ab4 200 PRINTS PR00449 Transforming protein P21 ras signature 136 149 5.1E-5 T 09-03-2017 LS838_RS03575 96049b08db12dbac336fe8d65a140ab4 200 PRINTS PR00449 Transforming protein P21 ras signature 24 45 5.1E-5 T 09-03-2017 LS838_RS03575 96049b08db12dbac336fe8d65a140ab4 200 PRINTS PR00449 Transforming protein P21 ras signature 175 197 5.1E-5 T 09-03-2017 LS838_RS03575 96049b08db12dbac336fe8d65a140ab4 200 SUPERFAMILY SSF52540 6 197 1.09E-38 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03575 96049b08db12dbac336fe8d65a140ab4 200 Pfam PF01926 50S ribosome-binding GTPase 25 146 4.1E-22 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS03575 96049b08db12dbac336fe8d65a140ab4 200 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 193 2.4E-69 T 09-03-2017 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 LS838_RS03575 96049b08db12dbac336fe8d65a140ab4 200 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 26 188 1.6E-13 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LS838_RS03575 96049b08db12dbac336fe8d65a140ab4 200 Gene3D G3DSA:3.40.50.300 3 198 9.1E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03575 96049b08db12dbac336fe8d65a140ab4 200 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 197 29.163 T 09-03-2017 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 LS838_RS07235 7f4db71239ed28c08e149eb7eef8da3d 109 Gene3D G3DSA:3.30.1310.10 9 108 1.6E-30 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family LS838_RS07235 7f4db71239ed28c08e149eb7eef8da3d 109 PIRSF PIRSF004555 11 109 5.4E-28 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family LS838_RS07235 7f4db71239ed28c08e149eb7eef8da3d 109 Pfam PF02575 YbaB/EbfC DNA-binding family 19 108 3.8E-28 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family LS838_RS07235 7f4db71239ed28c08e149eb7eef8da3d 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 13 107 20.55 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family LS838_RS07235 7f4db71239ed28c08e149eb7eef8da3d 109 SUPERFAMILY SSF82607 15 107 1.2E-27 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family LS838_RS07235 7f4db71239ed28c08e149eb7eef8da3d 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 12 106 8.6E-24 T 09-03-2017 IPR004401 Nucleoid-associated protein YbaB/EbfC family LS838_RS03910 7d45b5e2e3c3ae1844c7b9ebfabb8589 301 Gene3D G3DSA:1.10.10.10 1 85 2.5E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS03910 7d45b5e2e3c3ae1844c7b9ebfabb8589 301 SUPERFAMILY SSF46785 1 86 1.82E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS03910 7d45b5e2e3c3ae1844c7b9ebfabb8589 301 Pfam PF03466 LysR substrate binding domain 90 291 6.5E-21 T 09-03-2017 IPR005119 LysR, substrate-binding LS838_RS03910 7d45b5e2e3c3ae1844c7b9ebfabb8589 301 SUPERFAMILY SSF53850 92 291 2.9E-19 T 09-03-2017 LS838_RS03910 7d45b5e2e3c3ae1844c7b9ebfabb8589 301 Gene3D G3DSA:3.40.190.10 89 180 3.3E-7 T 09-03-2017 LS838_RS03910 7d45b5e2e3c3ae1844c7b9ebfabb8589 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 9.4E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS03910 7d45b5e2e3c3ae1844c7b9ebfabb8589 301 Gene3D G3DSA:3.40.190.10 181 264 1.6E-6 T 09-03-2017 LS838_RS03910 7d45b5e2e3c3ae1844c7b9ebfabb8589 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.7E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS03910 7d45b5e2e3c3ae1844c7b9ebfabb8589 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.7E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS03910 7d45b5e2e3c3ae1844c7b9ebfabb8589 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.7E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS07470 5dd42cbc99933b9bd448c94e89ca5050 539 PIRSF PIRSF002741 1 539 7.1E-89 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LS838_RS07470 5dd42cbc99933b9bd448c94e89ca5050 539 Gene3D G3DSA:3.90.76.10 40 215 4.3E-44 T 09-03-2017 LS838_RS07470 5dd42cbc99933b9bd448c94e89ca5050 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 457 4.1E-68 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain LS838_RS07470 5dd42cbc99933b9bd448c94e89ca5050 539 SUPERFAMILY SSF53850 25 531 1.47E-108 T 09-03-2017 LS838_RS07470 5dd42cbc99933b9bd448c94e89ca5050 539 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 09-03-2017 IPR023765 Solute-binding protein family 5, conserved site LS838_RS07470 5dd42cbc99933b9bd448c94e89ca5050 539 Gene3D G3DSA:3.10.105.10 287 508 2.7E-42 T 09-03-2017 LS838_RS03675 373e569cd14a087961cfb2463d777b28 565 SMART SM00836 449 565 2.0E-42 T 09-03-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 LS838_RS03675 373e569cd14a087961cfb2463d777b28 565 Hamap MF_00123 Arginine--tRNA ligase [argS]. 1 565 25.183 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 LS838_RS03675 373e569cd14a087961cfb2463d777b28 565 Gene3D G3DSA:1.10.730.10 443 565 3.2E-31 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS03675 373e569cd14a087961cfb2463d777b28 565 SUPERFAMILY SSF47323 443 565 8.11E-28 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS03675 373e569cd14a087961cfb2463d777b28 565 PRINTS PR01038 Arginyl-tRNA synthetase signature 128 144 1.4E-19 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 LS838_RS03675 373e569cd14a087961cfb2463d777b28 565 PRINTS PR01038 Arginyl-tRNA synthetase signature 152 165 1.4E-19 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 LS838_RS03675 373e569cd14a087961cfb2463d777b28 565 PRINTS PR01038 Arginyl-tRNA synthetase signature 113 128 1.4E-19 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 LS838_RS03675 373e569cd14a087961cfb2463d777b28 565 PRINTS PR01038 Arginyl-tRNA synthetase signature 296 317 1.4E-19 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 LS838_RS03675 373e569cd14a087961cfb2463d777b28 565 Pfam PF05746 DALR anticodon binding domain 449 565 8.9E-26 T 09-03-2017 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 LS838_RS03675 373e569cd14a087961cfb2463d777b28 565 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 7 565 1.0E-149 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 LS838_RS03675 373e569cd14a087961cfb2463d777b28 565 SUPERFAMILY SSF52374 109 443 2.96E-95 T 09-03-2017 LS838_RS03675 373e569cd14a087961cfb2463d777b28 565 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 83 2.9E-19 T 09-03-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 LS838_RS03675 373e569cd14a087961cfb2463d777b28 565 SMART SM01016 1 83 2.3E-30 T 09-03-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 LS838_RS03675 373e569cd14a087961cfb2463d777b28 565 Gene3D G3DSA:3.40.50.620 107 442 9.7E-108 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS03675 373e569cd14a087961cfb2463d777b28 565 SUPERFAMILY SSF55190 4 104 2.49E-26 T 09-03-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 LS838_RS03675 373e569cd14a087961cfb2463d777b28 565 Gene3D G3DSA:3.30.1360.70 4 99 1.3E-30 T 09-03-2017 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 LS838_RS03675 373e569cd14a087961cfb2463d777b28 565 Pfam PF00750 tRNA synthetases class I (R) 93 434 1.5E-88 T 09-03-2017 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 LS838_RS00985 965099e711cdcc0803e072d628a8da7e 758 SUPERFAMILY SSF48208 271 746 1.55E-145 T 09-03-2017 IPR008928 Six-hairpin glycosidase-like GO:0003824 LS838_RS00985 965099e711cdcc0803e072d628a8da7e 758 Gene3D G3DSA:2.70.98.40 1 266 2.4E-75 T 09-03-2017 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 LS838_RS00985 965099e711cdcc0803e072d628a8da7e 758 Gene3D G3DSA:2.60.420.10 679 751 1.1E-26 T 09-03-2017 LS838_RS00985 965099e711cdcc0803e072d628a8da7e 758 PIRSF PIRSF036289 1 757 4.2E-272 T 09-03-2017 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase LS838_RS00985 965099e711cdcc0803e072d628a8da7e 758 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 14 264 9.9E-50 T 09-03-2017 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 LS838_RS00985 965099e711cdcc0803e072d628a8da7e 758 SUPERFAMILY SSF74650 1 266 4.71E-79 T 09-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LS838_RS00985 965099e711cdcc0803e072d628a8da7e 758 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 320 691 1.1E-150 T 09-03-2017 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 LS838_RS00985 965099e711cdcc0803e072d628a8da7e 758 Gene3D G3DSA:1.50.10.10 315 678 7.9E-146 T 09-03-2017 IPR012341 Six-hairpin glycosidase GO:0003824 LS838_RS00985 965099e711cdcc0803e072d628a8da7e 758 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 697 748 1.5E-15 T 09-03-2017 IPR005194 Glycoside hydrolase family 65, C-terminal LS838_RS08965 d6fc2bf552f0841de1a435c9e74a152d 161 Pfam PF00877 NlpC/P60 family 55 155 2.1E-23 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain LS838_RS08965 d6fc2bf552f0841de1a435c9e74a152d 161 Gene3D G3DSA:3.90.1720.10 35 155 7.0E-38 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain LS838_RS08965 d6fc2bf552f0841de1a435c9e74a152d 161 SUPERFAMILY SSF54001 39 154 3.14E-35 T 09-03-2017 LS838_RS06295 702c22d81d6d3fc8680fca6e169a2c45 368 Pfam PF01321 Creatinase/Prolidase N-terminal domain 14 141 6.7E-21 T 09-03-2017 IPR000587 Creatinase, N-terminal GO:0016787 LS838_RS06295 702c22d81d6d3fc8680fca6e169a2c45 368 Gene3D G3DSA:3.90.230.10 141 363 1.6E-71 T 09-03-2017 IPR000994 Peptidase M24, structural domain LS838_RS06295 702c22d81d6d3fc8680fca6e169a2c45 368 Gene3D G3DSA:3.40.350.10 13 139 9.7E-20 T 09-03-2017 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal LS838_RS06295 702c22d81d6d3fc8680fca6e169a2c45 368 SUPERFAMILY SSF53092 11 139 6.63E-22 T 09-03-2017 IPR028980 Creatinase/Aminopeptidase P, N-terminal LS838_RS06295 702c22d81d6d3fc8680fca6e169a2c45 368 SUPERFAMILY SSF55920 141 364 9.16E-70 T 09-03-2017 IPR000994 Peptidase M24, structural domain LS838_RS06295 702c22d81d6d3fc8680fca6e169a2c45 368 Pfam PF00557 Metallopeptidase family M24 150 349 1.3E-60 T 09-03-2017 IPR000994 Peptidase M24, structural domain LS838_RS06295 702c22d81d6d3fc8680fca6e169a2c45 368 PRINTS PR00599 Methionine aminopeptidase-1 signature 320 332 6.4E-5 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase LS838_RS06295 702c22d81d6d3fc8680fca6e169a2c45 368 PRINTS PR00599 Methionine aminopeptidase-1 signature 221 237 6.4E-5 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase LS838_RS06295 702c22d81d6d3fc8680fca6e169a2c45 368 PRINTS PR00599 Methionine aminopeptidase-1 signature 288 300 6.4E-5 T 09-03-2017 IPR001714 Peptidase M24, methionine aminopeptidase LS838_RS06295 702c22d81d6d3fc8680fca6e169a2c45 368 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 297 309 - T 09-03-2017 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site LS838_RS04630 674a01629ffa32591125af5daac5d8cc 391 Gene3D G3DSA:3.40.50.720 96 274 8.1E-42 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS04630 674a01629ffa32591125af5daac5d8cc 391 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 92 271 4.4E-36 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LS838_RS04630 674a01629ffa32591125af5daac5d8cc 391 Gene3D G3DSA:3.40.50.720 28 95 4.9E-19 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS04630 674a01629ffa32591125af5daac5d8cc 391 SUPERFAMILY SSF51735 81 272 4.48E-40 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS04630 674a01629ffa32591125af5daac5d8cc 391 Gene3D G3DSA:3.30.70.260 300 387 5.2E-23 T 09-03-2017 LS838_RS04630 674a01629ffa32591125af5daac5d8cc 391 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 47 303 3.0E-15 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LS838_RS04630 674a01629ffa32591125af5daac5d8cc 391 SUPERFAMILY SSF52283 20 106 2.84E-19 T 09-03-2017 LS838_RS04630 674a01629ffa32591125af5daac5d8cc 391 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 137 164 - T 09-03-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LS838_RS04630 674a01629ffa32591125af5daac5d8cc 391 SUPERFAMILY SSF55021 307 387 2.91E-15 T 09-03-2017 LS838_RS07845 f559a18e051dd8579c39bca1f31aa949 176 Gene3D G3DSA:3.40.630.30 1 161 6.9E-36 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS07845 f559a18e051dd8579c39bca1f31aa949 176 SUPERFAMILY SSF55729 1 163 3.55E-30 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS07845 f559a18e051dd8579c39bca1f31aa949 176 Pfam PF00583 Acetyltransferase (GNAT) family 91 152 3.0E-13 T 09-03-2017 IPR000182 GNAT domain GO:0008080 LS838_RS05930 5caf8b25211f75ee52e9b571b6f54b44 565 SUPERFAMILY SSF55826 219 386 6.54E-29 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LS838_RS05930 5caf8b25211f75ee52e9b571b6f54b44 565 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 565 37.274 T 09-03-2017 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 LS838_RS05930 5caf8b25211f75ee52e9b571b6f54b44 565 SUPERFAMILY SSF52954 461 564 9.16E-24 T 09-03-2017 IPR004154 Anticodon-binding LS838_RS05930 5caf8b25211f75ee52e9b571b6f54b44 565 SUPERFAMILY SSF55681 9 237 1.66E-91 T 09-03-2017 LS838_RS05930 5caf8b25211f75ee52e9b571b6f54b44 565 SUPERFAMILY SSF55681 405 476 1.66E-91 T 09-03-2017 LS838_RS05930 5caf8b25211f75ee52e9b571b6f54b44 565 Gene3D G3DSA:3.90.960.10 249 386 4.8E-29 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LS838_RS05930 5caf8b25211f75ee52e9b571b6f54b44 565 Gene3D G3DSA:3.30.930.10 7 204 5.0E-91 T 09-03-2017 LS838_RS05930 5caf8b25211f75ee52e9b571b6f54b44 565 Gene3D G3DSA:3.30.930.10 390 465 5.0E-91 T 09-03-2017 LS838_RS05930 5caf8b25211f75ee52e9b571b6f54b44 565 Pfam PF04073 Aminoacyl-tRNA editing domain 257 374 3.0E-28 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LS838_RS05930 5caf8b25211f75ee52e9b571b6f54b44 565 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 94 457 5.5E-49 T 09-03-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS05930 5caf8b25211f75ee52e9b571b6f54b44 565 Gene3D G3DSA:3.40.50.800 466 564 1.6E-21 T 09-03-2017 IPR004154 Anticodon-binding LS838_RS05930 5caf8b25211f75ee52e9b571b6f54b44 565 Pfam PF03129 Anticodon binding domain 476 562 2.0E-13 T 09-03-2017 IPR004154 Anticodon-binding LS838_RS05930 5caf8b25211f75ee52e9b571b6f54b44 565 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 8.4E-16 T 09-03-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 LS838_RS05930 5caf8b25211f75ee52e9b571b6f54b44 565 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 8.4E-16 T 09-03-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 LS838_RS05930 5caf8b25211f75ee52e9b571b6f54b44 565 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 8.4E-16 T 09-03-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 LS838_RS05930 5caf8b25211f75ee52e9b571b6f54b44 565 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 8.4E-16 T 09-03-2017 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 LS838_RS05930 5caf8b25211f75ee52e9b571b6f54b44 565 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 561 4.0E-196 T 09-03-2017 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 LS838_RS02110 ff377721924aff778bd80728962790be 888 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 336 342 - T 09-03-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 LS838_RS02110 ff377721924aff778bd80728962790be 888 TIGRFAM TIGR01517 ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 12 877 1.9E-161 T 09-03-2017 IPR006408 P-type ATPase, subfamily IIB GO:0005388|GO:0005524|GO:0016020|GO:0070588 Reactome: R-HSA-418359|Reactome: R-HSA-5578775|Reactome: R-HSA-936837 LS838_RS02110 ff377721924aff778bd80728962790be 888 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 593 702 6.2E-34 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS02110 ff377721924aff778bd80728962790be 888 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 86 184 2.4E-21 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS02110 ff377721924aff778bd80728962790be 888 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 212 360 2.4E-25 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS02110 ff377721924aff778bd80728962790be 888 SMART SM00831 4 78 2.0E-26 T 09-03-2017 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 LS838_RS02110 ff377721924aff778bd80728962790be 888 SUPERFAMILY SSF81660 341 521 1.31E-47 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 LS838_RS02110 ff377721924aff778bd80728962790be 888 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 334 348 4.0E-39 T 09-03-2017 LS838_RS02110 ff377721924aff778bd80728962790be 888 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 549 4.0E-39 T 09-03-2017 LS838_RS02110 ff377721924aff778bd80728962790be 888 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 517 528 4.0E-39 T 09-03-2017 LS838_RS02110 ff377721924aff778bd80728962790be 888 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 164 178 4.0E-39 T 09-03-2017 LS838_RS02110 ff377721924aff778bd80728962790be 888 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 645 657 4.0E-39 T 09-03-2017 LS838_RS02110 ff377721924aff778bd80728962790be 888 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 621 640 4.0E-39 T 09-03-2017 LS838_RS02110 ff377721924aff778bd80728962790be 888 SUPERFAMILY SSF81665 4 117 1.57E-128 T 09-03-2017 LS838_RS02110 ff377721924aff778bd80728962790be 888 SUPERFAMILY SSF81665 228 328 1.57E-128 T 09-03-2017 LS838_RS02110 ff377721924aff778bd80728962790be 888 SUPERFAMILY SSF81665 671 882 1.57E-128 T 09-03-2017 LS838_RS02110 ff377721924aff778bd80728962790be 888 Gene3D G3DSA:3.40.1110.10 325 524 2.3E-56 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 LS838_RS02110 ff377721924aff778bd80728962790be 888 Pfam PF00689 Cation transporting ATPase, C-terminus 706 879 1.8E-46 T 09-03-2017 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 LS838_RS02110 ff377721924aff778bd80728962790be 888 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 653 678 1.2E-18 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS02110 ff377721924aff778bd80728962790be 888 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 621 637 1.2E-18 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS02110 ff377721924aff778bd80728962790be 888 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 593 609 1.2E-18 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS02110 ff377721924aff778bd80728962790be 888 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 475 493 1.2E-18 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS02110 ff377721924aff778bd80728962790be 888 Pfam PF00690 Cation transporter/ATPase, N-terminus 5 73 8.4E-21 T 09-03-2017 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 LS838_RS02110 ff377721924aff778bd80728962790be 888 SUPERFAMILY SSF81653 117 227 4.45E-31 T 09-03-2017 LS838_RS02110 ff377721924aff778bd80728962790be 888 Gene3D G3DSA:1.20.1110.10 58 111 2.9E-118 T 09-03-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 LS838_RS02110 ff377721924aff778bd80728962790be 888 Gene3D G3DSA:1.20.1110.10 590 882 2.9E-118 T 09-03-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 LS838_RS02110 ff377721924aff778bd80728962790be 888 SUPERFAMILY SSF56784 472 725 3.75E-59 T 09-03-2017 IPR023214 HAD-like domain LS838_RS02110 ff377721924aff778bd80728962790be 888 SUPERFAMILY SSF56784 332 352 3.75E-59 T 09-03-2017 IPR023214 HAD-like domain LS838_RS02110 ff377721924aff778bd80728962790be 888 Gene3D G3DSA:2.70.150.10 112 227 6.6E-44 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LS838_RS02110 ff377721924aff778bd80728962790be 888 Gene3D G3DSA:2.70.150.10 16 57 6.6E-44 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LS838_RS02110 ff377721924aff778bd80728962790be 888 Pfam PF00702 haloacid dehalogenase-like hydrolase 331 635 5.3E-24 T 09-03-2017 LS838_RS02110 ff377721924aff778bd80728962790be 888 Pfam PF00122 E1-E2 ATPase 85 325 7.2E-69 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LS838_RS01680 06ef6834b349809ec5f727f46677ed54 80 SMART SM00363 1 65 4.8E-10 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS01680 06ef6834b349809ec5f727f46677ed54 80 PIRSF PIRSF038881 1 80 3.2E-31 T 09-03-2017 IPR025490 RNA-binding protein, HP1423 type LS838_RS01680 06ef6834b349809ec5f727f46677ed54 80 Pfam PF01479 S4 domain 1 47 2.0E-12 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS01680 06ef6834b349809ec5f727f46677ed54 80 SUPERFAMILY SSF55174 1 70 6.28E-20 T 09-03-2017 LS838_RS01680 06ef6834b349809ec5f727f46677ed54 80 Gene3D G3DSA:3.10.290.10 1 77 6.8E-23 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS02430 7f4b9f4097c553256a8cc4f78685edcd 216 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 30 44 - T 09-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LS838_RS02430 7f4b9f4097c553256a8cc4f78685edcd 216 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 3 210 4.7E-66 T 09-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LS838_RS02430 7f4b9f4097c553256a8cc4f78685edcd 216 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 198 1.1E-58 T 09-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LS838_RS02430 7f4b9f4097c553256a8cc4f78685edcd 216 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 135 157 - T 09-03-2017 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 LS838_RS02430 7f4b9f4097c553256a8cc4f78685edcd 216 Gene3D G3DSA:3.20.20.70 1 215 5.0E-74 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LS838_RS02430 7f4b9f4097c553256a8cc4f78685edcd 216 SUPERFAMILY SSF51366 2 214 3.56E-61 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LS838_RS04435 a4ca374065aaee18d5248aa02927ee68 97 Gene3D G3DSA:3.40.50.300 1 91 4.8E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04435 a4ca374065aaee18d5248aa02927ee68 97 SUPERFAMILY SSF52540 1 92 1.51E-31 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07870 b322db79027af1d20441c771f276e121 219 Gene3D G3DSA:3.40.50.1390 65 184 5.6E-19 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS07870 b322db79027af1d20441c771f276e121 219 SUPERFAMILY SSF53041 65 198 1.01E-22 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS07870 b322db79027af1d20441c771f276e121 219 SMART SM00422 5 67 7.8E-9 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS07870 b322db79027af1d20441c771f276e121 219 SMART SM00857 65 205 4.6E-23 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS07870 b322db79027af1d20441c771f276e121 219 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS07870 b322db79027af1d20441c771f276e121 219 Pfam PF00239 Resolvase, N terminal domain 66 195 4.0E-21 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS07870 b322db79027af1d20441c771f276e121 219 Pfam PF00376 MerR family regulatory protein 6 42 3.3E-12 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS07870 b322db79027af1d20441c771f276e121 219 ProSitePatterns PS00397 Site-specific recombinases active site. 68 76 - T 09-03-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 LS838_RS07870 b322db79027af1d20441c771f276e121 219 Gene3D G3DSA:1.10.1660.10 2 50 1.2E-12 T 09-03-2017 LS838_RS07870 b322db79027af1d20441c771f276e121 219 SUPERFAMILY SSF46955 4 51 1.37E-11 T 09-03-2017 IPR009061 Putative DNA-binding domain LS838_RS05300 364fe4b53aeb1879e7ae8b5f95317ad6 203 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 199 36.163 T 09-03-2017 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 LS838_RS05300 364fe4b53aeb1879e7ae8b5f95317ad6 203 Pfam PF01470 Pyroglutamyl peptidase 3 197 1.4E-77 T 09-03-2017 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like LS838_RS05300 364fe4b53aeb1879e7ae8b5f95317ad6 203 PIRSF PIRSF015592 1 201 2.7E-74 T 09-03-2017 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 LS838_RS05300 364fe4b53aeb1879e7ae8b5f95317ad6 203 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 129 143 - T 09-03-2017 IPR033694 Pyroglutamyl peptidase I, Cys active site LS838_RS05300 364fe4b53aeb1879e7ae8b5f95317ad6 203 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 131 147 1.2E-36 T 09-03-2017 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 LS838_RS05300 364fe4b53aeb1879e7ae8b5f95317ad6 203 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 1.2E-36 T 09-03-2017 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 LS838_RS05300 364fe4b53aeb1879e7ae8b5f95317ad6 203 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 1.2E-36 T 09-03-2017 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 LS838_RS05300 364fe4b53aeb1879e7ae8b5f95317ad6 203 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 79 99 1.2E-36 T 09-03-2017 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 LS838_RS05300 364fe4b53aeb1879e7ae8b5f95317ad6 203 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 61 73 1.2E-36 T 09-03-2017 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 LS838_RS05300 364fe4b53aeb1879e7ae8b5f95317ad6 203 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 3 197 2.1E-69 T 09-03-2017 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 LS838_RS05300 364fe4b53aeb1879e7ae8b5f95317ad6 203 Gene3D G3DSA:3.40.630.20 2 198 3.3E-63 T 09-03-2017 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like LS838_RS05300 364fe4b53aeb1879e7ae8b5f95317ad6 203 SUPERFAMILY SSF53182 1 198 6.02E-64 T 09-03-2017 LS838_RS05380 20170ac3762e7809f429798bb1ef1d67 196 Pfam PF12464 Maltose acetyltransferase 7 57 9.7E-12 T 09-03-2017 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 LS838_RS05380 20170ac3762e7809f429798bb1ef1d67 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 162 8.1E-9 T 09-03-2017 IPR001451 Hexapeptide repeat LS838_RS05380 20170ac3762e7809f429798bb1ef1d67 196 Gene3D G3DSA:2.160.10.10 3 188 5.7E-62 T 09-03-2017 LS838_RS05380 20170ac3762e7809f429798bb1ef1d67 196 SUPERFAMILY SSF51161 3 187 9.98E-51 T 09-03-2017 IPR011004 Trimeric LpxA-like LS838_RS05380 20170ac3762e7809f429798bb1ef1d67 196 SMART SM01266 5 58 2.9E-11 T 09-03-2017 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 LS838_RS05380 20170ac3762e7809f429798bb1ef1d67 196 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 LS838_RS09085 70ac780201471ae501509f94168a446d 249 SUPERFAMILY SSF53681 5 111 2.13E-28 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS09085 70ac780201471ae501509f94168a446d 249 Gene3D G3DSA:3.40.50.1860 6 117 7.6E-34 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS09085 70ac780201471ae501509f94168a446d 249 TIGRFAM TIGR00035 asp_race: aspartate racemase 2 235 5.7E-67 T 09-03-2017 IPR004380 Aspartate racemase GO:0006520|GO:0016855 LS838_RS09085 70ac780201471ae501509f94168a446d 249 SUPERFAMILY SSF53681 121 234 4.09E-20 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS09085 70ac780201471ae501509f94168a446d 249 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 81 89 - T 09-03-2017 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS09085 70ac780201471ae501509f94168a446d 249 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 224 6.2E-58 T 09-03-2017 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS09085 70ac780201471ae501509f94168a446d 249 Gene3D G3DSA:3.40.50.1860 118 218 3.6E-24 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS07220 666bfd2b6d7a14e4be5b5f9e08d8a550 212 Pfam PF02223 Thymidylate kinase 8 197 7.8E-56 T 09-03-2017 LS838_RS07220 666bfd2b6d7a14e4be5b5f9e08d8a550 212 Gene3D G3DSA:3.40.50.300 3 207 7.9E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07220 666bfd2b6d7a14e4be5b5f9e08d8a550 212 SUPERFAMILY SSF52540 1 207 2.07E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07220 666bfd2b6d7a14e4be5b5f9e08d8a550 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 197 1.1E-59 T 09-03-2017 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 LS838_RS07220 666bfd2b6d7a14e4be5b5f9e08d8a550 212 Hamap MF_00165 Thymidylate kinase [tmk]. 4 208 30.999 T 09-03-2017 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 LS838_RS07220 666bfd2b6d7a14e4be5b5f9e08d8a550 212 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 09-03-2017 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 LS838_RS04340 1b6e9e11025f9c019a7412d4818ce80d 225 SUPERFAMILY SSF46894 123 221 2.24E-28 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LS838_RS04340 1b6e9e11025f9c019a7412d4818ce80d 225 Gene3D G3DSA:1.10.10.10 127 222 2.1E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS04340 1b6e9e11025f9c019a7412d4818ce80d 225 Pfam PF00072 Response regulator receiver domain 4 115 1.8E-24 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LS838_RS04340 1b6e9e11025f9c019a7412d4818ce80d 225 SMART SM00862 148 221 2.6E-27 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LS838_RS04340 1b6e9e11025f9c019a7412d4818ce80d 225 SUPERFAMILY SSF52172 3 129 4.98E-35 T 09-03-2017 IPR011006 CheY-like superfamily LS838_RS04340 1b6e9e11025f9c019a7412d4818ce80d 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 8.2E-27 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LS838_RS04340 1b6e9e11025f9c019a7412d4818ce80d 225 Gene3D G3DSA:3.40.50.2300 2 126 6.0E-34 T 09-03-2017 LS838_RS04340 1b6e9e11025f9c019a7412d4818ce80d 225 SMART SM00448 2 115 3.7E-31 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LS838_RS09225 7f1b9f96d267d6f26db230a18cfb5ce4 168 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 54 1.2E-6 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LS838_RS09225 7f1b9f96d267d6f26db230a18cfb5ce4 168 Gene3D G3DSA:1.10.357.10 13 113 3.0E-12 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LS838_RS09225 7f1b9f96d267d6f26db230a18cfb5ce4 168 SUPERFAMILY SSF46689 12 72 4.26E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS06555 2b2d78e56ae64050d6d7c04b4c0f3507 860 Pfam PF09586 Bacterial membrane protein YfhO 24 844 2.4E-204 T 09-03-2017 IPR018580 Uncharacterised protein family YfhO LS838_RS05580 63ec8607a45e2b111ccd1071f0cf7227 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 2.6E-33 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LS838_RS05580 63ec8607a45e2b111ccd1071f0cf7227 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 2.6E-33 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LS838_RS05580 63ec8607a45e2b111ccd1071f0cf7227 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 2.6E-33 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LS838_RS05580 63ec8607a45e2b111ccd1071f0cf7227 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 242 257 2.6E-33 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LS838_RS05580 63ec8607a45e2b111ccd1071f0cf7227 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 314 330 2.6E-33 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LS838_RS05580 63ec8607a45e2b111ccd1071f0cf7227 688 SUPERFAMILY SSF109604 337 489 2.04E-16 T 09-03-2017 LS838_RS05580 63ec8607a45e2b111ccd1071f0cf7227 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 685 9.6E-221 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LS838_RS05580 63ec8607a45e2b111ccd1071f0cf7227 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 685 27.539 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LS838_RS05580 63ec8607a45e2b111ccd1071f0cf7227 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 555 2.3E-206 T 09-03-2017 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 LS838_RS06105 d35bb37f9ad5c28cb1f1abad0d87deb7 1186 Pfam PF06470 SMC proteins Flexible Hinge Domain 515 635 2.8E-22 T 09-03-2017 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 LS838_RS06105 d35bb37f9ad5c28cb1f1abad0d87deb7 1186 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1172 3.2E-73 T 09-03-2017 IPR003395 RecF/RecN/SMC, N-terminal LS838_RS06105 d35bb37f9ad5c28cb1f1abad0d87deb7 1186 SUPERFAMILY SSF75553 480 683 2.22E-47 T 09-03-2017 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 LS838_RS06105 d35bb37f9ad5c28cb1f1abad0d87deb7 1186 PIRSF PIRSF005719 1 1185 4.5E-288 T 09-03-2017 IPR024704 Structural maintenance of chromosomes protein LS838_RS06105 d35bb37f9ad5c28cb1f1abad0d87deb7 1186 Gene3D G3DSA:3.40.50.300 1017 1184 5.6E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06105 d35bb37f9ad5c28cb1f1abad0d87deb7 1186 Gene3D G3DSA:3.40.50.300 3 163 5.6E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06105 d35bb37f9ad5c28cb1f1abad0d87deb7 1186 SMART SM00968 515 636 3.0E-31 T 09-03-2017 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 LS838_RS06105 d35bb37f9ad5c28cb1f1abad0d87deb7 1186 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 3 1179 0.0 T 09-03-2017 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 LS838_RS06105 d35bb37f9ad5c28cb1f1abad0d87deb7 1186 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1181 22.74 T 09-03-2017 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 LS838_RS06105 d35bb37f9ad5c28cb1f1abad0d87deb7 1186 SUPERFAMILY SSF52540 1065 1184 3.63E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06105 d35bb37f9ad5c28cb1f1abad0d87deb7 1186 SUPERFAMILY SSF52540 3 210 3.63E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06220 6f382d7be394772d9e19885673647b48 315 Gene3D G3DSA:3.40.50.170 4 205 3.0E-63 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LS838_RS06220 6f382d7be394772d9e19885673647b48 315 Pfam PF00551 Formyl transferase 4 180 3.1E-39 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LS838_RS06220 6f382d7be394772d9e19885673647b48 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 09-03-2017 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LS838_RS06220 6f382d7be394772d9e19885673647b48 315 Pfam PF02911 Formyl transferase, C-terminal domain 205 301 1.8E-22 T 09-03-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LS838_RS06220 6f382d7be394772d9e19885673647b48 315 SUPERFAMILY SSF53328 4 202 6.02E-60 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LS838_RS06220 6f382d7be394772d9e19885673647b48 315 Gene3D G3DSA:3.10.25.10 207 303 4.7E-25 T 09-03-2017 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LS838_RS06220 6f382d7be394772d9e19885673647b48 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 4 305 1.9E-88 T 09-03-2017 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 LS838_RS06220 6f382d7be394772d9e19885673647b48 315 SUPERFAMILY SSF50486 205 305 1.07E-24 T 09-03-2017 IPR011034 Formyl transferase, C-terminal-like GO:0003824 LS838_RS06220 6f382d7be394772d9e19885673647b48 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 304 31.884 T 09-03-2017 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 LS838_RS06215 d33f3b71997003ba8acec7095b7c7cf9 438 Pfam PF01029 NusB family 4 128 4.5E-27 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LS838_RS06215 d33f3b71997003ba8acec7095b7c7cf9 438 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 320 331 - T 09-03-2017 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS06215 d33f3b71997003ba8acec7095b7c7cf9 438 Gene3D G3DSA:3.40.50.150 234 435 1.5E-56 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS06215 d33f3b71997003ba8acec7095b7c7cf9 438 Pfam PF01189 16S rRNA methyltransferase RsmB/F 245 434 5.8E-58 T 09-03-2017 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS06215 d33f3b71997003ba8acec7095b7c7cf9 438 Gene3D G3DSA:1.10.940.10 2 152 9.7E-33 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LS838_RS06215 d33f3b71997003ba8acec7095b7c7cf9 438 SUPERFAMILY SSF53335 141 435 6.91E-64 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS06215 d33f3b71997003ba8acec7095b7c7cf9 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 253 263 4.3E-29 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS06215 d33f3b71997003ba8acec7095b7c7cf9 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 224 238 4.3E-29 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS06215 d33f3b71997003ba8acec7095b7c7cf9 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 321 333 4.3E-29 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS06215 d33f3b71997003ba8acec7095b7c7cf9 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 371 387 4.3E-29 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS06215 d33f3b71997003ba8acec7095b7c7cf9 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 419 436 4.3E-29 T 09-03-2017 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS06215 d33f3b71997003ba8acec7095b7c7cf9 438 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 6 437 1.5E-104 T 09-03-2017 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS06215 d33f3b71997003ba8acec7095b7c7cf9 438 SUPERFAMILY SSF48013 4 152 4.45E-28 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LS838_RS05030 c4cd4c1a3beffd40646fbae66541b1bc 149 SUPERFAMILY SSF46785 2 138 1.13E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS05030 c4cd4c1a3beffd40646fbae66541b1bc 149 Pfam PF02082 Transcriptional regulator 1 83 5.0E-19 T 09-03-2017 IPR000944 Transcription regulator Rrf2-type LS838_RS05030 c4cd4c1a3beffd40646fbae66541b1bc 149 Gene3D G3DSA:1.10.10.10 1 139 5.4E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS03145 40a7cbe85c7bd3e2b02e96a74d42c810 533 Gene3D G3DSA:3.40.190.10 148 297 1.0E-42 T 09-03-2017 LS838_RS03145 40a7cbe85c7bd3e2b02e96a74d42c810 533 SUPERFAMILY SSF53850 27 524 9.95E-115 T 09-03-2017 LS838_RS03145 40a7cbe85c7bd3e2b02e96a74d42c810 533 Gene3D G3DSA:3.10.105.10 298 503 4.1E-54 T 09-03-2017 LS838_RS03145 40a7cbe85c7bd3e2b02e96a74d42c810 533 PIRSF PIRSF002741 1 532 2.3E-96 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LS838_RS03145 40a7cbe85c7bd3e2b02e96a74d42c810 533 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 455 2.3E-70 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain LS838_RS04345 a486af5171d13da915fe91d744ccc92f 552 SMART SM00387 432 544 5.9E-36 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS04345 a486af5171d13da915fe91d744ccc92f 552 SMART SM00388 323 389 6.3E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS04345 a486af5171d13da915fe91d744ccc92f 552 SUPERFAMILY SSF47384 311 389 1.37E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS04345 a486af5171d13da915fe91d744ccc92f 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 497 1.7E-18 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LS838_RS04345 a486af5171d13da915fe91d744ccc92f 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 483 1.7E-18 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LS838_RS04345 a486af5171d13da915fe91d744ccc92f 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 541 1.7E-18 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LS838_RS04345 a486af5171d13da915fe91d744ccc92f 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 522 1.7E-18 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LS838_RS04345 a486af5171d13da915fe91d744ccc92f 552 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 437 541 4.3E-25 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS04345 a486af5171d13da915fe91d744ccc92f 552 Gene3D G3DSA:3.30.450.20 215 282 1.8E-6 T 09-03-2017 LS838_RS04345 a486af5171d13da915fe91d744ccc92f 552 Pfam PF00512 His Kinase A (phospho-acceptor) domain 324 388 1.2E-15 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS04345 a486af5171d13da915fe91d744ccc92f 552 Gene3D G3DSA:3.30.450.20 66 141 4.0E-8 T 09-03-2017 LS838_RS04345 a486af5171d13da915fe91d744ccc92f 552 SUPERFAMILY SSF55785 214 301 1.84E-6 T 09-03-2017 IPR000014 PAS domain LS838_RS04345 a486af5171d13da915fe91d744ccc92f 552 Pfam PF13188 PAS domain 224 262 2.4E-4 T 09-03-2017 IPR000014 PAS domain LS838_RS04345 a486af5171d13da915fe91d744ccc92f 552 Gene3D G3DSA:3.30.565.10 375 544 1.1E-43 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS04345 a486af5171d13da915fe91d744ccc92f 552 SUPERFAMILY SSF55874 380 544 1.57E-40 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS04345 a486af5171d13da915fe91d744ccc92f 552 Gene3D G3DSA:1.10.287.130 316 374 2.2E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS04515 8e8da7cd75776bd6b1f3a227285c9c6c 267 SUPERFAMILY SSF56784 1 264 4.9E-59 T 09-03-2017 IPR023214 HAD-like domain LS838_RS04515 8e8da7cd75776bd6b1f3a227285c9c6c 267 Gene3D G3DSA:3.40.50.1000 179 264 1.4E-39 T 09-03-2017 IPR023214 HAD-like domain LS838_RS04515 8e8da7cd75776bd6b1f3a227285c9c6c 267 Gene3D G3DSA:3.40.50.1000 1 79 1.4E-39 T 09-03-2017 IPR023214 HAD-like domain LS838_RS04515 8e8da7cd75776bd6b1f3a227285c9c6c 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 1.2E-50 T 09-03-2017 IPR023214 HAD-like domain LS838_RS04515 8e8da7cd75776bd6b1f3a227285c9c6c 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 232 3.5E-20 T 09-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 LS838_RS04515 8e8da7cd75776bd6b1f3a227285c9c6c 267 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 258 2.7E-45 T 09-03-2017 IPR000150 Cof protein GO:0016787 LS838_RS04515 8e8da7cd75776bd6b1f3a227285c9c6c 267 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 09-03-2017 LS838_RS04515 8e8da7cd75776bd6b1f3a227285c9c6c 267 Gene3D G3DSA:3.30.1240.10 82 178 3.6E-16 T 09-03-2017 LS838_RS06630 555dc0c332da344de2964432e58f62ed 369 SUPERFAMILY SSF52540 69 230 1.05E-28 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06630 555dc0c332da344de2964432e58f62ed 369 Gene3D G3DSA:3.40.50.300 73 227 7.2E-32 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06630 555dc0c332da344de2964432e58f62ed 369 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 6 369 3.9E-143 T 09-03-2017 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH LS838_RS06630 555dc0c332da344de2964432e58f62ed 369 Pfam PF01926 50S ribosome-binding GTPase 169 231 2.4E-13 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS08645 db842ae77a71a5a168bfa096944eb297 295 Pfam PF13930 DNA/RNA non-specific endonuclease 55 187 1.3E-40 T 09-03-2017 LS838_RS08645 db842ae77a71a5a168bfa096944eb297 295 Gene3D G3DSA:3.40.10.10 252 292 5.2E-6 T 09-03-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 LS838_RS08645 db842ae77a71a5a168bfa096944eb297 295 SUPERFAMILY SSF57884 252 295 4.45E-7 T 09-03-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 LS838_RS03780 75a7ce52cad81422eb59af94b8651c00 66 Pfam PF11151 Protein of unknown function (DUF2929) 2 57 7.8E-20 T 09-03-2017 IPR021324 Protein of unknown function DUF2929 LS838_RS00910 1013350610ecba19f1fe6e86610c83e3 226 Gene3D G3DSA:1.10.357.10 3 202 2.7E-25 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LS838_RS00910 1013350610ecba19f1fe6e86610c83e3 226 SUPERFAMILY SSF46689 3 71 7.7E-13 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS00910 1013350610ecba19f1fe6e86610c83e3 226 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 9.2E-7 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LS838_RS02805 2d802d4fa1b6026279048854f009b431 277 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 133 145 - T 09-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 LS838_RS02805 2d802d4fa1b6026279048854f009b431 277 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 6 258 2.4E-73 T 09-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 LS838_RS02805 2d802d4fa1b6026279048854f009b431 277 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 7 255 4.9E-74 T 09-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 LS838_RS02805 2d802d4fa1b6026279048854f009b431 277 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 4 260 17.115 T 09-03-2017 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 LS838_RS03225 90f6349157c8de9f0a83cf79e92e8a17 320 PRINTS PR00126 ATP synthase gamma subunit signature 195 212 6.2E-30 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LS838_RS03225 90f6349157c8de9f0a83cf79e92e8a17 320 PRINTS PR00126 ATP synthase gamma subunit signature 102 121 6.2E-30 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LS838_RS03225 90f6349157c8de9f0a83cf79e92e8a17 320 PRINTS PR00126 ATP synthase gamma subunit signature 266 285 6.2E-30 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LS838_RS03225 90f6349157c8de9f0a83cf79e92e8a17 320 PRINTS PR00126 ATP synthase gamma subunit signature 297 318 6.2E-30 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LS838_RS03225 90f6349157c8de9f0a83cf79e92e8a17 320 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 3 319 3.3E-84 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LS838_RS03225 90f6349157c8de9f0a83cf79e92e8a17 320 Pfam PF00231 ATP synthase 5 319 3.5E-78 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LS838_RS03225 90f6349157c8de9f0a83cf79e92e8a17 320 Gene3D G3DSA:3.40.1380.10 95 220 1.0E-35 T 09-03-2017 LS838_RS03225 90f6349157c8de9f0a83cf79e92e8a17 320 Gene3D G3DSA:1.10.287.80 253 319 9.0E-47 T 09-03-2017 LS838_RS03225 90f6349157c8de9f0a83cf79e92e8a17 320 Gene3D G3DSA:1.10.287.80 3 37 9.0E-47 T 09-03-2017 LS838_RS03225 90f6349157c8de9f0a83cf79e92e8a17 320 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 305 318 - T 09-03-2017 IPR023632 ATPase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210 LS838_RS03225 90f6349157c8de9f0a83cf79e92e8a17 320 SUPERFAMILY SSF52943 3 57 2.22E-76 T 09-03-2017 IPR023633 ATPase, F1 complex, gamma subunit domain Reactome: R-HSA-163210 LS838_RS03225 90f6349157c8de9f0a83cf79e92e8a17 320 SUPERFAMILY SSF52943 95 319 2.22E-76 T 09-03-2017 IPR023633 ATPase, F1 complex, gamma subunit domain Reactome: R-HSA-163210 LS838_RS03225 90f6349157c8de9f0a83cf79e92e8a17 320 Hamap MF_00815 ATP synthase gamma chain [atpG]. 2 319 31.132 T 09-03-2017 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LS838_RS07980 143b2390d7e0ccfc2b7c83d9cdcb671c 280 Gene3D G3DSA:3.90.1720.10 151 259 1.1E-27 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain LS838_RS07980 143b2390d7e0ccfc2b7c83d9cdcb671c 280 Gene3D G3DSA:2.30.30.40 92 129 5.4E-4 T 09-03-2017 LS838_RS07980 143b2390d7e0ccfc2b7c83d9cdcb671c 280 Pfam PF00877 NlpC/P60 family 171 248 1.4E-17 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain LS838_RS07980 143b2390d7e0ccfc2b7c83d9cdcb671c 280 SUPERFAMILY SSF54001 154 259 4.58E-26 T 09-03-2017 LS838_RS07980 143b2390d7e0ccfc2b7c83d9cdcb671c 280 Pfam PF08239 Bacterial SH3 domain 82 128 1.9E-6 T 09-03-2017 IPR003646 SH3-like domain, bacterial-type LS838_RS05065 1abd94c86b94b19dae76070c837ed1bd 358 SUPERFAMILY SSF52317 152 356 8.41E-57 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS05065 1abd94c86b94b19dae76070c837ed1bd 358 SUPERFAMILY SSF52021 1 144 1.44E-53 T 09-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS05065 1abd94c86b94b19dae76070c837ed1bd 358 Pfam PF00117 Glutamine amidotransferase class-I 173 350 3.8E-44 T 09-03-2017 IPR017926 Glutamine amidotransferase LS838_RS05065 1abd94c86b94b19dae76070c837ed1bd 358 Gene3D G3DSA:3.40.50.880 157 356 7.7E-66 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS05065 1abd94c86b94b19dae76070c837ed1bd 358 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 356 42.876 T 09-03-2017 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS05065 1abd94c86b94b19dae76070c837ed1bd 358 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 171 185 4.8E-31 T 09-03-2017 LS838_RS05065 1abd94c86b94b19dae76070c837ed1bd 358 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 258 275 4.8E-31 T 09-03-2017 LS838_RS05065 1abd94c86b94b19dae76070c837ed1bd 358 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 210 224 4.8E-31 T 09-03-2017 LS838_RS05065 1abd94c86b94b19dae76070c837ed1bd 358 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 241 257 4.8E-31 T 09-03-2017 LS838_RS05065 1abd94c86b94b19dae76070c837ed1bd 358 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 283 294 4.8E-31 T 09-03-2017 LS838_RS05065 1abd94c86b94b19dae76070c837ed1bd 358 PRINTS PR00096 Glutamine amidotransferase superfamily signature 241 252 5.8E-12 T 09-03-2017 LS838_RS05065 1abd94c86b94b19dae76070c837ed1bd 358 PRINTS PR00096 Glutamine amidotransferase superfamily signature 327 340 5.8E-12 T 09-03-2017 LS838_RS05065 1abd94c86b94b19dae76070c837ed1bd 358 PRINTS PR00096 Glutamine amidotransferase superfamily signature 213 222 5.8E-12 T 09-03-2017 LS838_RS05065 1abd94c86b94b19dae76070c837ed1bd 358 Gene3D G3DSA:3.50.30.20 1 143 4.0E-57 T 09-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS05065 1abd94c86b94b19dae76070c837ed1bd 358 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 130 1.2E-48 T 09-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS05065 1abd94c86b94b19dae76070c837ed1bd 358 SMART SM01097 1 131 3.3E-81 T 09-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS05065 1abd94c86b94b19dae76070c837ed1bd 358 PRINTS PR00097 Anthranilate synthase component II signature 213 222 3.1E-7 T 09-03-2017 LS838_RS05065 1abd94c86b94b19dae76070c837ed1bd 358 PRINTS PR00097 Anthranilate synthase component II signature 327 340 3.1E-7 T 09-03-2017 LS838_RS05065 1abd94c86b94b19dae76070c837ed1bd 358 PRINTS PR00097 Anthranilate synthase component II signature 241 252 3.1E-7 T 09-03-2017 LS838_RS05065 1abd94c86b94b19dae76070c837ed1bd 358 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 3 352 3.0E-134 T 09-03-2017 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS07375 08c726a1eb55c1bdd531f08b52771e6e 337 SUPERFAMILY SSF47413 1 59 3.94E-17 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS07375 08c726a1eb55c1bdd531f08b52771e6e 337 Gene3D G3DSA:3.40.50.2300 168 299 2.8E-30 T 09-03-2017 LS838_RS07375 08c726a1eb55c1bdd531f08b52771e6e 337 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.3E-6 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LS838_RS07375 08c726a1eb55c1bdd531f08b52771e6e 337 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.3E-6 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LS838_RS07375 08c726a1eb55c1bdd531f08b52771e6e 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.5E-18 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LS838_RS07375 08c726a1eb55c1bdd531f08b52771e6e 337 SMART SM00354 1 71 9.9E-29 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LS838_RS07375 08c726a1eb55c1bdd531f08b52771e6e 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 09-03-2017 LS838_RS07375 08c726a1eb55c1bdd531f08b52771e6e 337 Gene3D G3DSA:1.10.260.40 2 53 8.1E-24 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS07375 08c726a1eb55c1bdd531f08b52771e6e 337 SUPERFAMILY SSF53822 58 315 1.38E-56 T 09-03-2017 IPR028082 Periplasmic binding protein-like I LS838_RS07375 08c726a1eb55c1bdd531f08b52771e6e 337 Pfam PF13377 Periplasmic binding protein-like domain 164 322 3.2E-22 T 09-03-2017 LS838_RS07375 08c726a1eb55c1bdd531f08b52771e6e 337 Gene3D G3DSA:3.40.50.2300 54 167 1.7E-34 T 09-03-2017 LS838_RS06460 03afc2de0895eb7671b3d6905bc4a876 307 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 36 54 - T 09-03-2017 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 LS838_RS06460 03afc2de0895eb7671b3d6905bc4a876 307 Gene3D G3DSA:3.40.50.1100 138 306 1.6E-68 T 09-03-2017 LS838_RS06460 03afc2de0895eb7671b3d6905bc4a876 307 Gene3D G3DSA:3.40.50.1100 41 137 1.9E-43 T 09-03-2017 LS838_RS06460 03afc2de0895eb7671b3d6905bc4a876 307 SUPERFAMILY SSF53686 5 306 6.16E-99 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LS838_RS06460 03afc2de0895eb7671b3d6905bc4a876 307 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 12 294 1.6E-67 T 09-03-2017 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme LS838_RS06460 03afc2de0895eb7671b3d6905bc4a876 307 TIGRFAM TIGR01136 cysKM: cysteine synthase 11 306 2.5E-125 T 09-03-2017 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 LS838_RS06460 03afc2de0895eb7671b3d6905bc4a876 307 TIGRFAM TIGR01139 cysK: cysteine synthase A 11 306 2.5E-131 T 09-03-2017 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 LS838_RS06470 003b3d0aed05aa5b0f062700112a8d37 113 Pfam PF08797 HIRAN domain 3 56 1.2E-8 T 09-03-2017 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 LS838_RS03725 23fc8684f091cdb502c374754b2a7d50 309 SUPERFAMILY SSF56281 1 305 1.76E-75 T 09-03-2017 IPR001279 Metallo-beta-lactamase LS838_RS03725 23fc8684f091cdb502c374754b2a7d50 309 Pfam PF12706 Beta-lactamase superfamily domain 35 270 2.1E-13 T 09-03-2017 IPR001279 Metallo-beta-lactamase LS838_RS03725 23fc8684f091cdb502c374754b2a7d50 309 Hamap MF_01818 Ribonuclease BN [rbn]. 1 305 37.876 T 09-03-2017 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 LS838_RS03725 23fc8684f091cdb502c374754b2a7d50 309 Gene3D G3DSA:3.60.15.10 4 305 1.4E-80 T 09-03-2017 IPR001279 Metallo-beta-lactamase LS838_RS03725 23fc8684f091cdb502c374754b2a7d50 309 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 304 7.1E-109 T 09-03-2017 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 LS838_RS00455 0072115b84dea2ca53b2da500e9994db 275 SUPERFAMILY SSF56219 1 275 3.53E-60 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase LS838_RS00455 0072115b84dea2ca53b2da500e9994db 275 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 273 7.3E-55 T 09-03-2017 LS838_RS00455 0072115b84dea2ca53b2da500e9994db 275 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 274 4.1E-76 T 09-03-2017 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 LS838_RS00455 0072115b84dea2ca53b2da500e9994db 275 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 37 46 - T 09-03-2017 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 LS838_RS00455 0072115b84dea2ca53b2da500e9994db 275 Gene3D G3DSA:3.60.10.10 1 274 1.7E-76 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase LS838_RS00455 0072115b84dea2ca53b2da500e9994db 275 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 234 245 - T 09-03-2017 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 LS838_RS00455 0072115b84dea2ca53b2da500e9994db 275 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 207 223 - T 09-03-2017 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 LS838_RS00455 0072115b84dea2ca53b2da500e9994db 275 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 252 1.3E-22 T 09-03-2017 IPR005135 Endonuclease/exonuclease/phosphatase LS838_RS00955 5d03257f065071ebed75368d02d337a9 153 Pfam PF01797 Transposase IS200 like 9 129 4.3E-35 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LS838_RS00955 5d03257f065071ebed75368d02d337a9 153 Gene3D G3DSA:3.30.70.1290 4 130 4.3E-42 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LS838_RS00955 5d03257f065071ebed75368d02d337a9 153 SMART SM01321 9 129 8.7E-33 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LS838_RS00955 5d03257f065071ebed75368d02d337a9 153 SUPERFAMILY SSF143422 3 129 3.79E-38 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LS838_RS02370 e2e406ad307f36985f8e98308b0f489a 218 Hamap MF_00551 Uridine kinase [udk]. 4 208 41.158 T 09-03-2017 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LS838_RS02370 e2e406ad307f36985f8e98308b0f489a 218 TIGRFAM TIGR00235 udk: uridine kinase 2 207 3.8E-88 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LS838_RS02370 e2e406ad307f36985f8e98308b0f489a 218 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 195 9.4E-50 T 09-03-2017 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 LS838_RS02370 e2e406ad307f36985f8e98308b0f489a 218 SUPERFAMILY SSF52540 5 199 4.37E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02370 e2e406ad307f36985f8e98308b0f489a 218 PRINTS PR00988 Uridine kinase signature 174 187 2.9E-37 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LS838_RS02370 e2e406ad307f36985f8e98308b0f489a 218 PRINTS PR00988 Uridine kinase signature 37 48 2.9E-37 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LS838_RS02370 e2e406ad307f36985f8e98308b0f489a 218 PRINTS PR00988 Uridine kinase signature 82 97 2.9E-37 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LS838_RS02370 e2e406ad307f36985f8e98308b0f489a 218 PRINTS PR00988 Uridine kinase signature 152 163 2.9E-37 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LS838_RS02370 e2e406ad307f36985f8e98308b0f489a 218 PRINTS PR00988 Uridine kinase signature 138 148 2.9E-37 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LS838_RS02370 e2e406ad307f36985f8e98308b0f489a 218 PRINTS PR00988 Uridine kinase signature 7 24 2.9E-37 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LS838_RS02370 e2e406ad307f36985f8e98308b0f489a 218 Gene3D G3DSA:3.40.50.300 3 199 3.5E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03830 5e721bfa9d7285fa762e5dda6690af45 200 PIRSF PIRSF019345 2 199 1.7E-43 T 09-03-2017 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 LS838_RS03830 5e721bfa9d7285fa762e5dda6690af45 200 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 6 189 3.5E-43 T 09-03-2017 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 LS838_RS03830 5e721bfa9d7285fa762e5dda6690af45 200 Pfam PF04079 Segregation and condensation complex subunit ScpB 7 166 2.2E-49 T 09-03-2017 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 LS838_RS03830 5e721bfa9d7285fa762e5dda6690af45 200 Gene3D G3DSA:1.10.10.10 7 80 2.6E-8 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS03830 5e721bfa9d7285fa762e5dda6690af45 200 SUPERFAMILY SSF46785 5 80 8.62E-7 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS03830 5e721bfa9d7285fa762e5dda6690af45 200 Hamap MF_01804 Segregation and condensation protein B [scpB]. 1 184 30.028 T 09-03-2017 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 LS838_RS03830 5e721bfa9d7285fa762e5dda6690af45 200 Gene3D G3DSA:1.10.10.10 86 157 1.1E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS03830 5e721bfa9d7285fa762e5dda6690af45 200 SUPERFAMILY SSF46785 85 157 1.5E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS08235 3d9a2d2bb6c1ceb16f7179d925bbc0ff 475 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 7 474 9.9E-140 T 09-03-2017 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 LS838_RS08235 3d9a2d2bb6c1ceb16f7179d925bbc0ff 475 Pfam PF13520 Amino acid permease 10 412 1.7E-54 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LS838_RS08235 3d9a2d2bb6c1ceb16f7179d925bbc0ff 475 PIRSF PIRSF006060 1 473 1.3E-48 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LS838_RS01950 2dec5aeac4bcc1aeb19ab8c29ca75f22 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 38 4.0E-10 T 09-03-2017 LS838_RS01950 2dec5aeac4bcc1aeb19ab8c29ca75f22 38 SUPERFAMILY SSF57840 1 38 1.01E-17 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01950 2dec5aeac4bcc1aeb19ab8c29ca75f22 38 Pfam PF00444 Ribosomal protein L36 1 38 2.3E-22 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01950 2dec5aeac4bcc1aeb19ab8c29ca75f22 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01950 2dec5aeac4bcc1aeb19ab8c29ca75f22 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.548 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01950 2dec5aeac4bcc1aeb19ab8c29ca75f22 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 4.4E-23 T 09-03-2017 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS05320 116e89367474202f84a33650ccf2b4d1 506 Gene3D G3DSA:3.40.190.120 348 444 1.7E-37 T 09-03-2017 LS838_RS05320 116e89367474202f84a33650ccf2b4d1 506 Gene3D G3DSA:3.40.190.10 456 506 3.7E-56 T 09-03-2017 LS838_RS05320 116e89367474202f84a33650ccf2b4d1 506 Gene3D G3DSA:3.40.190.10 234 347 3.7E-56 T 09-03-2017 LS838_RS05320 116e89367474202f84a33650ccf2b4d1 506 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 237 502 1.7E-60 T 09-03-2017 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 LS838_RS05320 116e89367474202f84a33650ccf2b4d1 506 Gene3D G3DSA:1.10.3720.10 8 197 2.9E-38 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS05320 116e89367474202f84a33650ccf2b4d1 506 SUPERFAMILY SSF161098 13 193 6.93E-38 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS05320 116e89367474202f84a33650ccf2b4d1 506 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 201 1.9E-23 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS05320 116e89367474202f84a33650ccf2b4d1 506 SUPERFAMILY SSF53850 237 505 4.23E-73 T 09-03-2017 LS838_RS06925 77a0a5a56566f2a657763b0b0e29c3c9 804 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 493 782 7.0E-69 T 09-03-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 LS838_RS06925 77a0a5a56566f2a657763b0b0e29c3c9 804 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 18 784 4.3E-290 T 09-03-2017 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 LS838_RS06925 77a0a5a56566f2a657763b0b0e29c3c9 804 Gene3D G3DSA:3.20.20.60 493 791 1.6E-89 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LS838_RS06925 77a0a5a56566f2a657763b0b0e29c3c9 804 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 419 430 - T 09-03-2017 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 LS838_RS06925 77a0a5a56566f2a657763b0b0e29c3c9 804 SUPERFAMILY SSF51621 488 787 2.07E-87 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LS838_RS06925 77a0a5a56566f2a657763b0b0e29c3c9 804 SUPERFAMILY SSF52009 357 470 9.03E-34 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LS838_RS06925 77a0a5a56566f2a657763b0b0e29c3c9 804 SUPERFAMILY SSF56059 16 388 9.3E-96 T 09-03-2017 LS838_RS06925 77a0a5a56566f2a657763b0b0e29c3c9 804 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 31 348 1.4E-112 T 09-03-2017 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 LS838_RS06925 77a0a5a56566f2a657763b0b0e29c3c9 804 Gene3D G3DSA:3.50.30.10 358 468 2.5E-36 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LS838_RS06925 77a0a5a56566f2a657763b0b0e29c3c9 804 PIRSF PIRSF000854 13 787 5.1E-257 T 09-03-2017 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 LS838_RS06925 77a0a5a56566f2a657763b0b0e29c3c9 804 Gene3D G3DSA:3.30.470.20 207 350 3.0E-52 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LS838_RS06925 77a0a5a56566f2a657763b0b0e29c3c9 804 Pfam PF00391 PEP-utilising enzyme, mobile domain 389 464 1.0E-24 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LS838_RS06925 77a0a5a56566f2a657763b0b0e29c3c9 804 Gene3D G3DSA:3.30.1490.20 17 206 4.9E-61 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LS838_RS01855 4cffc913320fd8a6321f7792fc977e80 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 09-03-2017 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01855 4cffc913320fd8a6321f7792fc977e80 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.9E-23 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01855 4cffc913320fd8a6321f7792fc977e80 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.9E-23 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01855 4cffc913320fd8a6321f7792fc977e80 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.9E-23 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01855 4cffc913320fd8a6321f7792fc977e80 91 PIRSF PIRSF002144 1 91 5.9E-33 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01855 4cffc913320fd8a6321f7792fc977e80 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 90 2.8E-45 T 09-03-2017 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 LS838_RS01855 4cffc913320fd8a6321f7792fc977e80 91 Pfam PF00203 Ribosomal protein S19 3 83 2.1E-37 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01855 4cffc913320fd8a6321f7792fc977e80 91 SUPERFAMILY SSF54570 2 84 1.44E-35 T 09-03-2017 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01855 4cffc913320fd8a6321f7792fc977e80 91 Gene3D G3DSA:3.30.860.10 1 89 6.8E-42 T 09-03-2017 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01855 4cffc913320fd8a6321f7792fc977e80 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.122 T 09-03-2017 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS07070 e1ba975a18ddd92ad17bfd12f6c5f87f 206 SUPERFAMILY SSF52972 3 198 9.94E-64 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like LS838_RS07070 e1ba975a18ddd92ad17bfd12f6c5f87f 206 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 3 200 46.516 T 09-03-2017 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 LS838_RS07070 e1ba975a18ddd92ad17bfd12f6c5f87f 206 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 5 198 1.2E-56 T 09-03-2017 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 LS838_RS07070 e1ba975a18ddd92ad17bfd12f6c5f87f 206 Pfam PF01725 Ham1 family 5 196 8.5E-54 T 09-03-2017 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 LS838_RS07070 e1ba975a18ddd92ad17bfd12f6c5f87f 206 Gene3D G3DSA:3.90.950.10 2 202 2.5E-73 T 09-03-2017 IPR029001 Inosine triphosphate pyrophosphatase-like LS838_RS03710 0e5878e35db57526c8b28b28c182dc03 600 SUPERFAMILY SSF82771 16 95 2.75E-19 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily LS838_RS03710 0e5878e35db57526c8b28b28c182dc03 600 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 381 535 1.3E-39 T 09-03-2017 IPR001162 UvrC family homology region LS838_RS03710 0e5878e35db57526c8b28b28c182dc03 600 Hamap MF_00203 UvrABC system protein C [uvrC]. 3 599 25.458 T 09-03-2017 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 LS838_RS03710 0e5878e35db57526c8b28b28c182dc03 600 Gene3D G3DSA:4.10.860.10 176 237 2.1E-19 T 09-03-2017 IPR001943 UVR domain GO:0005515 LS838_RS03710 0e5878e35db57526c8b28b28c182dc03 600 Gene3D G3DSA:1.10.150.20 549 597 5.2E-16 T 09-03-2017 LS838_RS03710 0e5878e35db57526c8b28b28c182dc03 600 Pfam PF02151 UvrB/uvrC motif 198 231 4.8E-9 T 09-03-2017 IPR001943 UVR domain GO:0005515 LS838_RS03710 0e5878e35db57526c8b28b28c182dc03 600 SUPERFAMILY SSF47781 515 596 9.21E-16 T 09-03-2017 IPR010994 RuvA domain 2-like LS838_RS03710 0e5878e35db57526c8b28b28c182dc03 600 Pfam PF01541 GIY-YIG catalytic domain 17 91 1.4E-10 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily LS838_RS03710 0e5878e35db57526c8b28b28c182dc03 600 Gene3D G3DSA:3.40.1440.10 16 93 6.5E-12 T 09-03-2017 IPR027299 GIY-YIG domain LS838_RS03710 0e5878e35db57526c8b28b28c182dc03 600 SUPERFAMILY SSF46600 183 236 1.2E-13 T 09-03-2017 IPR001943 UVR domain GO:0005515 LS838_RS03710 0e5878e35db57526c8b28b28c182dc03 600 Pfam PF14520 Helix-hairpin-helix domain 550 599 1.6E-6 T 09-03-2017 LS838_RS03710 0e5878e35db57526c8b28b28c182dc03 600 SMART SM00465 16 96 2.3E-19 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily LS838_RS03710 0e5878e35db57526c8b28b28c182dc03 600 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 7 581 2.8E-170 T 09-03-2017 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 LS838_RS07145 f60fe439a428833d11245c4d7bfbfb06 656 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 121 1.5E-13 T 09-03-2017 LS838_RS07145 f60fe439a428833d11245c4d7bfbfb06 656 SUPERFAMILY SSF54211 190 324 1.4E-32 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LS838_RS07145 f60fe439a428833d11245c4d7bfbfb06 656 Pfam PF08676 MutL C terminal dimerisation domain 471 607 1.9E-26 T 09-03-2017 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 LS838_RS07145 f60fe439a428833d11245c4d7bfbfb06 656 SMART SM00853 473 613 1.3E-22 T 09-03-2017 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 LS838_RS07145 f60fe439a428833d11245c4d7bfbfb06 656 SMART SM01340 208 325 1.2E-43 T 09-03-2017 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 LS838_RS07145 f60fe439a428833d11245c4d7bfbfb06 656 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 09-03-2017 IPR014762 DNA mismatch repair, conserved site LS838_RS07145 f60fe439a428833d11245c4d7bfbfb06 656 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 209 324 9.6E-32 T 09-03-2017 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 LS838_RS07145 f60fe439a428833d11245c4d7bfbfb06 656 SUPERFAMILY SSF118116 473 653 1.07E-28 T 09-03-2017 LS838_RS07145 f60fe439a428833d11245c4d7bfbfb06 656 SUPERFAMILY SSF55874 2 214 3.54E-52 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS07145 f60fe439a428833d11245c4d7bfbfb06 656 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 652 23.741 T 09-03-2017 IPR020667 DNA mismatch repair protein, MutL GO:0006298 LS838_RS07145 f60fe439a428833d11245c4d7bfbfb06 656 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 305 3.6E-96 T 09-03-2017 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 LS838_RS07145 f60fe439a428833d11245c4d7bfbfb06 656 Gene3D G3DSA:3.30.565.10 3 202 6.8E-72 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS07145 f60fe439a428833d11245c4d7bfbfb06 656 Gene3D G3DSA:3.30.230.10 203 324 5.5E-35 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LS838_RS07080 62069ce8182ce2230fec7f999798f6a5 103 TIGRFAM TIGR01068 thioredoxin: thioredoxin 6 100 2.5E-35 T 09-03-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LS838_RS07080 62069ce8182ce2230fec7f999798f6a5 103 ProSitePatterns PS00194 Thioredoxin family active site. 20 38 - T 09-03-2017 IPR017937 Thioredoxin, conserved site GO:0045454 LS838_RS07080 62069ce8182ce2230fec7f999798f6a5 103 PRINTS PR00421 Thioredoxin family signature 66 77 5.5E-7 T 09-03-2017 LS838_RS07080 62069ce8182ce2230fec7f999798f6a5 103 PRINTS PR00421 Thioredoxin family signature 27 36 5.5E-7 T 09-03-2017 LS838_RS07080 62069ce8182ce2230fec7f999798f6a5 103 PRINTS PR00421 Thioredoxin family signature 19 27 5.5E-7 T 09-03-2017 LS838_RS07080 62069ce8182ce2230fec7f999798f6a5 103 SUPERFAMILY SSF52833 4 101 2.71E-35 T 09-03-2017 IPR012336 Thioredoxin-like fold LS838_RS07080 62069ce8182ce2230fec7f999798f6a5 103 PIRSF PIRSF000077 1 102 7.2E-38 T 09-03-2017 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 LS838_RS07080 62069ce8182ce2230fec7f999798f6a5 103 Pfam PF00085 Thioredoxin 3 100 3.5E-28 T 09-03-2017 IPR013766 Thioredoxin domain GO:0045454 LS838_RS07080 62069ce8182ce2230fec7f999798f6a5 103 Gene3D G3DSA:3.40.30.10 4 101 2.5E-34 T 09-03-2017 IPR012336 Thioredoxin-like fold LS838_RS07545 8961e69f2f46e3e04208b1083435d533 25 Pfam PF00557 Metallopeptidase family M24 1 24 7.7E-5 T 09-03-2017 IPR000994 Peptidase M24, structural domain LS838_RS07545 8961e69f2f46e3e04208b1083435d533 25 SUPERFAMILY SSF55920 1 25 4.32E-6 T 09-03-2017 IPR000994 Peptidase M24, structural domain LS838_RS07545 8961e69f2f46e3e04208b1083435d533 25 Gene3D G3DSA:3.90.230.10 1 25 1.1E-4 T 09-03-2017 IPR000994 Peptidase M24, structural domain LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 SUPERFAMILY SSF51905 7 364 9.46E-47 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 Gene3D G3DSA:3.30.390.30 333 434 3.9E-12 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 7.1E-39 T 09-03-2017 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 253 267 7.1E-39 T 09-03-2017 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 7.1E-39 T 09-03-2017 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 7.1E-39 T 09-03-2017 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 395 410 7.1E-39 T 09-03-2017 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 7.1E-39 T 09-03-2017 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 295 302 7.1E-39 T 09-03-2017 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 333 354 7.1E-39 T 09-03-2017 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.4E-24 T 09-03-2017 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 280 302 1.4E-24 T 09-03-2017 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 252 268 1.4E-24 T 09-03-2017 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 1.4E-24 T 09-03-2017 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 1.4E-24 T 09-03-2017 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 PIRSF PIRSF000350 1 432 3.2E-57 T 09-03-2017 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 SUPERFAMILY SSF55424 334 436 1.1E-16 T 09-03-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 Gene3D G3DSA:3.50.50.60 142 268 1.1E-28 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 314 8.8E-53 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 337 434 1.6E-6 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 Gene3D G3DSA:3.50.50.60 269 332 2.2E-47 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS09775 91f66dc61af8606c95c27129935a2e37 444 Gene3D G3DSA:3.50.50.60 6 141 2.2E-47 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS04605 2039a36d76533c30d787d1d76e43dd0f 447 Hamap MF_01221 UPF0210 protein . 1 447 51.19 T 09-03-2017 IPR007841 Uncharacterised protein family UPF0210 LS838_RS04605 2039a36d76533c30d787d1d76e43dd0f 447 Gene3D G3DSA:3.20.70.20 2 447 3.9E-213 T 09-03-2017 LS838_RS04605 2039a36d76533c30d787d1d76e43dd0f 447 Pfam PF05167 Uncharacterised ACR (DUF711) 12 411 2.0E-174 T 09-03-2017 IPR007841 Uncharacterised protein family UPF0210 LS838_RS04605 2039a36d76533c30d787d1d76e43dd0f 447 SUPERFAMILY SSF51998 2 442 6.87E-180 T 09-03-2017 LS838_RS03410 759d0e93f97f78b789cdeb1529e1f3c2 100 Pfam PF02325 YGGT family 14 86 2.3E-15 T 09-03-2017 IPR003425 CCB3/YggT GO:0016020 LS838_RS06180 c3764538b0206edc418265bcee3e1f11 33 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1 33 2.1E-9 T 09-03-2017 IPR019931 LPXTG cell wall anchor domain LS838_RS06180 c3764538b0206edc418265bcee3e1f11 33 Pfam PF00746 Gram positive anchor 1 28 5.7E-6 T 09-03-2017 IPR019948 Gram-positive anchor LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 183 196 4.9E-55 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 212 231 4.9E-55 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 555 565 4.9E-55 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 151 167 4.9E-55 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 483 501 4.9E-55 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 125 142 4.9E-55 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 522 544 4.9E-55 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 2 804 0.0 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 SUPERFAMILY SSF52374 2 223 2.01E-140 T 09-03-2017 LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 SUPERFAMILY SSF52374 410 616 2.01E-140 T 09-03-2017 LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 Pfam PF08264 Anticodon-binding domain of tRNA 657 765 1.1E-19 T 09-03-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 1 803 22.639 T 09-03-2017 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 Gene3D G3DSA:1.10.730.10 602 738 1.3E-39 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 Pfam PF09334 tRNA synthetases class I (M) 37 169 5.5E-17 T 09-03-2017 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 Gene3D G3DSA:3.90.740.10 220 418 6.6E-60 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 SUPERFAMILY SSF47323 620 803 1.87E-36 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 SUPERFAMILY SSF50677 223 409 8.9E-57 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 411 599 4.0E-20 T 09-03-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 218 397 2.5E-67 T 09-03-2017 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 Gene3D G3DSA:3.40.50.620 419 601 4.0E-164 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS06935 9d569a20c114c67a27b7d44b5f281158 804 Gene3D G3DSA:3.40.50.620 2 219 4.0E-164 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS05875 312924c52ca28b24c48cf179a9e47732 205 Hamap MF_01151 Protein GrpE [grpE]. 15 205 20.339 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 LS838_RS05875 312924c52ca28b24c48cf179a9e47732 205 ProSitePatterns PS01071 grpE protein signature. 159 203 - T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 LS838_RS05875 312924c52ca28b24c48cf179a9e47732 205 PRINTS PR00773 GrpE protein signature 184 203 5.7E-26 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 LS838_RS05875 312924c52ca28b24c48cf179a9e47732 205 PRINTS PR00773 GrpE protein signature 102 117 5.7E-26 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 LS838_RS05875 312924c52ca28b24c48cf179a9e47732 205 PRINTS PR00773 GrpE protein signature 74 90 5.7E-26 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 LS838_RS05875 312924c52ca28b24c48cf179a9e47732 205 PRINTS PR00773 GrpE protein signature 156 171 5.7E-26 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 LS838_RS05875 312924c52ca28b24c48cf179a9e47732 205 Gene3D G3DSA:2.30.22.10 148 205 5.4E-25 T 09-03-2017 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 LS838_RS05875 312924c52ca28b24c48cf179a9e47732 205 Gene3D G3DSA:3.90.20.20 49 146 6.3E-26 T 09-03-2017 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 LS838_RS05875 312924c52ca28b24c48cf179a9e47732 205 SUPERFAMILY SSF51064 149 205 7.72E-17 T 09-03-2017 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 LS838_RS05875 312924c52ca28b24c48cf179a9e47732 205 SUPERFAMILY SSF58014 51 148 1.57E-22 T 09-03-2017 LS838_RS05875 312924c52ca28b24c48cf179a9e47732 205 Pfam PF01025 GrpE 41 205 1.6E-47 T 09-03-2017 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 LS838_RS01835 7f153f47a394ead88ee6f09a3954d631 209 Gene3D G3DSA:2.40.30.10 4 33 1.0E-9 T 09-03-2017 LS838_RS01835 7f153f47a394ead88ee6f09a3954d631 209 Gene3D G3DSA:2.40.30.10 156 207 1.0E-9 T 09-03-2017 LS838_RS01835 7f153f47a394ead88ee6f09a3954d631 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 205 35.285 T 09-03-2017 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01835 7f153f47a394ead88ee6f09a3954d631 209 Pfam PF00297 Ribosomal protein L3 99 174 1.0E-8 T 09-03-2017 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01835 7f153f47a394ead88ee6f09a3954d631 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 09-03-2017 IPR019926 Ribosomal protein L3, conserved site LS838_RS01835 7f153f47a394ead88ee6f09a3954d631 209 Gene3D G3DSA:4.10.960.10 77 155 3.2E-25 T 09-03-2017 LS838_RS01835 7f153f47a394ead88ee6f09a3954d631 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 202 3.3E-78 T 09-03-2017 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01835 7f153f47a394ead88ee6f09a3954d631 209 SUPERFAMILY SSF50447 1 207 2.03E-68 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain LS838_RS01870 470af505547ee90af51c43beef631fa1 147 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 83 94 - T 09-03-2017 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01870 470af505547ee90af51c43beef631fa1 147 PRINTS PR00060 Ribosomal protein L16 signature 89 118 1.4E-35 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01870 470af505547ee90af51c43beef631fa1 147 PRINTS PR00060 Ribosomal protein L16 signature 25 37 1.4E-35 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01870 470af505547ee90af51c43beef631fa1 147 PRINTS PR00060 Ribosomal protein L16 signature 59 88 1.4E-35 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01870 470af505547ee90af51c43beef631fa1 147 PRINTS PR00060 Ribosomal protein L16 signature 43 54 1.4E-35 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01870 470af505547ee90af51c43beef631fa1 147 Gene3D G3DSA:3.90.1170.10 24 139 6.4E-53 T 09-03-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 LS838_RS01870 470af505547ee90af51c43beef631fa1 147 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 60 71 - T 09-03-2017 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01870 470af505547ee90af51c43beef631fa1 147 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 2 135 37.107 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01870 470af505547ee90af51c43beef631fa1 147 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 3 128 8.7E-56 T 09-03-2017 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01870 470af505547ee90af51c43beef631fa1 147 SUPERFAMILY SSF54686 2 138 1.44E-54 T 09-03-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 LS838_RS01870 470af505547ee90af51c43beef631fa1 147 Pfam PF00252 Ribosomal protein L16p/L10e 5 133 3.5E-47 T 09-03-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 LS838_RS06055 99018f33eebefdc17ba31132b14d5826 616 Gene3D G3DSA:3.90.780.10 409 602 4.7E-41 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LS838_RS06055 99018f33eebefdc17ba31132b14d5826 616 PRINTS PR01607 Apyrase family signature 57 75 2.7E-17 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LS838_RS06055 99018f33eebefdc17ba31132b14d5826 616 PRINTS PR01607 Apyrase family signature 466 489 2.7E-17 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LS838_RS06055 99018f33eebefdc17ba31132b14d5826 616 PRINTS PR01607 Apyrase family signature 305 328 2.7E-17 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LS838_RS06055 99018f33eebefdc17ba31132b14d5826 616 PRINTS PR01607 Apyrase family signature 539 558 2.7E-17 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LS838_RS06055 99018f33eebefdc17ba31132b14d5826 616 SUPERFAMILY SSF55816 409 600 2.88E-39 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LS838_RS06055 99018f33eebefdc17ba31132b14d5826 616 Pfam PF00149 Calcineurin-like phosphoesterase 61 323 2.2E-6 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LS838_RS06055 99018f33eebefdc17ba31132b14d5826 616 Gene3D G3DSA:3.60.21.10 54 400 1.9E-62 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like LS838_RS06055 99018f33eebefdc17ba31132b14d5826 616 SUPERFAMILY SSF56300 54 399 1.73E-53 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like LS838_RS06055 99018f33eebefdc17ba31132b14d5826 616 Pfam PF02872 5'-nucleotidase, C-terminal domain 409 564 5.9E-30 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LS838_RS06055 99018f33eebefdc17ba31132b14d5826 616 ProSitePatterns PS00786 5'-nucleotidase signature 2. 146 157 - T 09-03-2017 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LS838_RS07355 0885b26873f837ce8e172ab550494757 424 SMART SM00640 24 407 1.3E-84 T 09-03-2017 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 LS838_RS07355 0885b26873f837ce8e172ab550494757 424 Gene3D G3DSA:2.115.10.20 21 230 3.4E-27 T 09-03-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain LS838_RS07355 0885b26873f837ce8e172ab550494757 424 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 24 324 4.0E-90 T 09-03-2017 IPR013148 Glycosyl hydrolase family 32, N-terminal LS838_RS07355 0885b26873f837ce8e172ab550494757 424 SUPERFAMILY SSF75005 15 325 8.32E-102 T 09-03-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain LS838_RS07355 0885b26873f837ce8e172ab550494757 424 Gene3D G3DSA:2.60.120.560 300 331 6.2E-5 T 09-03-2017 IPR013189 Glycosyl hydrolase family 32, C-terminal LS838_RS01050 53be9d1a36ced8d01509e33b498bb4a4 239 Pfam PF00072 Response regulator receiver domain 9 116 4.6E-16 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LS838_RS01050 53be9d1a36ced8d01509e33b498bb4a4 239 Gene3D G3DSA:2.40.50.40 137 196 2.3E-12 T 09-03-2017 LS838_RS01050 53be9d1a36ced8d01509e33b498bb4a4 239 SUPERFAMILY SSF52172 6 122 2.28E-21 T 09-03-2017 IPR011006 CheY-like superfamily LS838_RS01050 53be9d1a36ced8d01509e33b498bb4a4 239 SMART SM00850 136 229 2.8E-12 T 09-03-2017 IPR007492 LytTR DNA-binding domain GO:0003677 LS838_RS01050 53be9d1a36ced8d01509e33b498bb4a4 239 Pfam PF04397 LytTr DNA-binding domain 138 227 2.2E-13 T 09-03-2017 IPR007492 LytTR DNA-binding domain GO:0003677 LS838_RS01050 53be9d1a36ced8d01509e33b498bb4a4 239 SMART SM00448 7 116 1.2E-20 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LS838_RS01050 53be9d1a36ced8d01509e33b498bb4a4 239 Gene3D G3DSA:3.40.50.2300 5 121 8.6E-25 T 09-03-2017 LS838_RS00980 349a5bc54f2ceff622756ce1053dfcc5 567 Gene3D G3DSA:3.20.20.80 127 499 2.7E-121 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS00980 349a5bc54f2ceff622756ce1053dfcc5 567 SUPERFAMILY SSF51445 63 500 4.17E-114 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS00980 349a5bc54f2ceff622756ce1053dfcc5 567 SMART SM00642 138 497 1.2E-104 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LS838_RS00980 349a5bc54f2ceff622756ce1053dfcc5 567 Pfam PF00128 Alpha amylase, catalytic domain 173 471 1.5E-77 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LS838_RS00980 349a5bc54f2ceff622756ce1053dfcc5 567 SUPERFAMILY SSF81296 1 107 4.48E-15 T 09-03-2017 IPR014756 Immunoglobulin E-set LS838_RS00980 349a5bc54f2ceff622756ce1053dfcc5 567 Gene3D G3DSA:2.60.40.10 1 124 1.6E-33 T 09-03-2017 IPR013783 Immunoglobulin-like fold LS838_RS00980 349a5bc54f2ceff622756ce1053dfcc5 567 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 1 120 2.5E-29 T 09-03-2017 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 LS838_RS06820 856a35682d0a40e6cac85206c04bd7df 274 Gene3D G3DSA:3.60.150.10 1 108 5.7E-27 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 LS838_RS06820 856a35682d0a40e6cac85206c04bd7df 274 Pfam PF01264 Chorismate synthase 1 109 5.4E-20 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 LS838_RS06820 856a35682d0a40e6cac85206c04bd7df 274 SUPERFAMILY SSF103263 1 109 6.02E-26 T 09-03-2017 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 LS838_RS06820 856a35682d0a40e6cac85206c04bd7df 274 Gene3D G3DSA:3.65.10.10 109 263 1.4E-35 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 LS838_RS06820 856a35682d0a40e6cac85206c04bd7df 274 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 106 265 1.9E-43 T 09-03-2017 IPR001986 Enolpyruvate transferase domain GO:0016765 LS838_RS06820 856a35682d0a40e6cac85206c04bd7df 274 SUPERFAMILY SSF55205 102 267 1.8E-41 T 09-03-2017 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 LS838_RS04025 a1a49142ea0fa0d2bba64d880e8adec6 366 SUPERFAMILY SSF53901 243 363 2.71E-36 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LS838_RS04025 a1a49142ea0fa0d2bba64d880e8adec6 366 PIRSF PIRSF000429 1 366 4.0E-108 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 LS838_RS04025 a1a49142ea0fa0d2bba64d880e8adec6 366 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 362 3.5E-116 T 09-03-2017 IPR002155 Thiolase GO:0008152|GO:0016747 LS838_RS04025 a1a49142ea0fa0d2bba64d880e8adec6 366 Gene3D G3DSA:3.40.47.10 126 176 3.8E-56 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LS838_RS04025 a1a49142ea0fa0d2bba64d880e8adec6 366 Gene3D G3DSA:3.40.47.10 251 364 3.8E-56 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LS838_RS04025 a1a49142ea0fa0d2bba64d880e8adec6 366 ProSitePatterns PS00737 Thiolases signature 2. 313 329 - T 09-03-2017 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 LS838_RS04025 a1a49142ea0fa0d2bba64d880e8adec6 366 ProSitePatterns PS00099 Thiolases active site. 347 360 - T 09-03-2017 IPR020610 Thiolase, active site GO:0008152|GO:0016747 LS838_RS04025 a1a49142ea0fa0d2bba64d880e8adec6 366 Pfam PF02803 Thiolase, C-terminal domain 244 364 4.5E-42 T 09-03-2017 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 LS838_RS04025 a1a49142ea0fa0d2bba64d880e8adec6 366 SUPERFAMILY SSF53901 3 244 5.0E-68 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LS838_RS04025 a1a49142ea0fa0d2bba64d880e8adec6 366 Gene3D G3DSA:3.40.47.10 177 249 6.6E-58 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LS838_RS04025 a1a49142ea0fa0d2bba64d880e8adec6 366 Gene3D G3DSA:3.40.47.10 3 123 6.6E-58 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LS838_RS04025 a1a49142ea0fa0d2bba64d880e8adec6 366 Pfam PF00108 Thiolase, N-terminal domain 4 236 1.6E-65 T 09-03-2017 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 LS838_RS06400 f7ee4f5c472e701c7fd09ce578d96a30 374 SUPERFAMILY SSF56059 106 305 6.54E-63 T 09-03-2017 LS838_RS06400 f7ee4f5c472e701c7fd09ce578d96a30 374 SUPERFAMILY SSF51246 308 372 1.18E-16 T 09-03-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LS838_RS06400 f7ee4f5c472e701c7fd09ce578d96a30 374 Gene3D G3DSA:3.30.470.20 185 367 2.9E-69 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LS838_RS06400 f7ee4f5c472e701c7fd09ce578d96a30 374 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 8 74 9.7E-7 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LS838_RS06400 f7ee4f5c472e701c7fd09ce578d96a30 374 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 10 362 3.0E-120 T 09-03-2017 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 LS838_RS06400 f7ee4f5c472e701c7fd09ce578d96a30 374 Gene3D G3DSA:3.30.1490.20 121 184 7.3E-24 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LS838_RS06400 f7ee4f5c472e701c7fd09ce578d96a30 374 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 10 359 41.88 T 09-03-2017 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 LS838_RS06400 f7ee4f5c472e701c7fd09ce578d96a30 374 Gene3D G3DSA:3.40.50.20 6 114 2.4E-35 T 09-03-2017 IPR016185 Pre-ATP-grasp domain LS838_RS06400 f7ee4f5c472e701c7fd09ce578d96a30 374 Pfam PF02222 ATP-grasp domain 115 284 3.1E-56 T 09-03-2017 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type LS838_RS06400 f7ee4f5c472e701c7fd09ce578d96a30 374 SUPERFAMILY SSF52440 6 92 5.32E-25 T 09-03-2017 IPR016185 Pre-ATP-grasp domain LS838_RS03740 54aa4e4db0ae7bd0cc2f45bda26beb9a 521 Gene3D G3DSA:3.90.780.10 327 514 2.5E-33 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LS838_RS03740 54aa4e4db0ae7bd0cc2f45bda26beb9a 521 Pfam PF00149 Calcineurin-like phosphoesterase 5 239 4.4E-8 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LS838_RS03740 54aa4e4db0ae7bd0cc2f45bda26beb9a 521 PRINTS PR01607 Apyrase family signature 369 392 1.1E-21 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LS838_RS03740 54aa4e4db0ae7bd0cc2f45bda26beb9a 521 PRINTS PR01607 Apyrase family signature 1 19 1.1E-21 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LS838_RS03740 54aa4e4db0ae7bd0cc2f45bda26beb9a 521 PRINTS PR01607 Apyrase family signature 187 204 1.1E-21 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LS838_RS03740 54aa4e4db0ae7bd0cc2f45bda26beb9a 521 PRINTS PR01607 Apyrase family signature 222 245 1.1E-21 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LS838_RS03740 54aa4e4db0ae7bd0cc2f45bda26beb9a 521 PRINTS PR01607 Apyrase family signature 459 478 1.1E-21 T 09-03-2017 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LS838_RS03740 54aa4e4db0ae7bd0cc2f45bda26beb9a 521 Gene3D G3DSA:3.60.21.10 2 312 8.9E-72 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like LS838_RS03740 54aa4e4db0ae7bd0cc2f45bda26beb9a 521 SUPERFAMILY SSF55816 311 507 4.84E-38 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LS838_RS03740 54aa4e4db0ae7bd0cc2f45bda26beb9a 521 SUPERFAMILY SSF56300 2 313 2.24E-72 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like LS838_RS03740 54aa4e4db0ae7bd0cc2f45bda26beb9a 521 Pfam PF02872 5'-nucleotidase, C-terminal domain 314 482 3.6E-29 T 09-03-2017 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-73621|Reactome: R-HSA-74259 LS838_RS04330 3d93dc7793954ef19c5e70c5b3517196 251 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS04330 3d93dc7793954ef19c5e70c5b3517196 251 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 5 251 5.5E-128 T 09-03-2017 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 LS838_RS04330 3d93dc7793954ef19c5e70c5b3517196 251 Pfam PF00005 ABC transporter 20 176 1.4E-33 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS04330 3d93dc7793954ef19c5e70c5b3517196 251 SMART SM00382 29 240 7.7E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS04330 3d93dc7793954ef19c5e70c5b3517196 251 SUPERFAMILY SSF52540 5 238 1.36E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04330 3d93dc7793954ef19c5e70c5b3517196 251 Gene3D G3DSA:3.40.50.300 2 243 1.3E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05435 f7d84e935db8f6121ebc93799e5b206a 275 Pfam PF01551 Peptidase family M23 102 190 7.2E-10 T 09-03-2017 IPR016047 Peptidase M23 LS838_RS05435 f7d84e935db8f6121ebc93799e5b206a 275 Gene3D G3DSA:2.70.70.10 45 220 1.3E-21 T 09-03-2017 LS838_RS05435 f7d84e935db8f6121ebc93799e5b206a 275 SUPERFAMILY SSF51261 84 192 5.18E-15 T 09-03-2017 IPR011055 Duplicated hybrid motif LS838_RS01965 fd55a125646f4b9a42f8d4863079d588 312 Gene3D G3DSA:3.30.1360.10 2 62 6.2E-12 T 09-03-2017 LS838_RS01965 fd55a125646f4b9a42f8d4863079d588 312 SUPERFAMILY SSF55257 4 48 6.67E-32 T 09-03-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01965 fd55a125646f4b9a42f8d4863079d588 312 SUPERFAMILY SSF55257 170 224 6.67E-32 T 09-03-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01965 fd55a125646f4b9a42f8d4863079d588 312 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 238 302 2.0E-27 T 09-03-2017 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01965 fd55a125646f4b9a42f8d4863079d588 312 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 55 150 7.3E-25 T 09-03-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01965 fd55a125646f4b9a42f8d4863079d588 312 SUPERFAMILY SSF47789 246 310 3.66E-23 T 09-03-2017 LS838_RS01965 fd55a125646f4b9a42f8d4863079d588 312 SUPERFAMILY SSF56553 48 169 3.92E-40 T 09-03-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01965 fd55a125646f4b9a42f8d4863079d588 312 SMART SM00662 18 225 1.4E-91 T 09-03-2017 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01965 fd55a125646f4b9a42f8d4863079d588 312 Gene3D G3DSA:2.170.120.12 63 168 5.8E-44 T 09-03-2017 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01965 fd55a125646f4b9a42f8d4863079d588 312 Gene3D G3DSA:1.10.150.20 244 311 2.0E-31 T 09-03-2017 LS838_RS01965 fd55a125646f4b9a42f8d4863079d588 312 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 18 310 1.0E-119 T 09-03-2017 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01965 fd55a125646f4b9a42f8d4863079d588 312 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 24 219 1.7E-21 T 09-03-2017 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01965 fd55a125646f4b9a42f8d4863079d588 312 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 251 308 9.0E-23 T 09-03-2017 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01965 fd55a125646f4b9a42f8d4863079d588 312 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 311 36.793 T 09-03-2017 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS04920 3250fd37201bec4ece074a1140cbc3de 585 SUPERFAMILY SSF90123 11 329 4.71E-64 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS04920 3250fd37201bec4ece074a1140cbc3de 585 Pfam PF00005 ABC transporter 362 511 2.7E-31 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS04920 3250fd37201bec4ece074a1140cbc3de 585 Pfam PF00664 ABC transporter transmembrane region 22 295 1.1E-42 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS04920 3250fd37201bec4ece074a1140cbc3de 585 SMART SM00382 371 556 1.9E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS04920 3250fd37201bec4ece074a1140cbc3de 585 Gene3D G3DSA:1.20.1560.10 11 327 1.5E-64 T 09-03-2017 LS838_RS04920 3250fd37201bec4ece074a1140cbc3de 585 SUPERFAMILY SSF52540 339 582 1.59E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04920 3250fd37201bec4ece074a1140cbc3de 585 Gene3D G3DSA:3.40.50.300 345 576 1.3E-76 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01875 f04374f802b00319ab6d88cfb36573df 65 SUPERFAMILY SSF46561 1 63 6.15E-24 T 09-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01875 f04374f802b00319ab6d88cfb36573df 65 Pfam PF00831 Ribosomal L29 protein 4 60 5.4E-26 T 09-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01875 f04374f802b00319ab6d88cfb36573df 65 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.745 T 09-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01875 f04374f802b00319ab6d88cfb36573df 65 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 09-03-2017 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01875 f04374f802b00319ab6d88cfb36573df 65 Gene3D G3DSA:1.10.287.310 1 63 2.6E-30 T 09-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01875 f04374f802b00319ab6d88cfb36573df 65 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 6.7E-24 T 09-03-2017 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS04020 14488c4b66a356cb5cde2b0554d84e77 201 Pfam PF09711 CRISPR-associated protein (Cas_Csn2) 98 200 1.8E-8 T 09-03-2017 IPR010146 CRISPR-associated protein, Csn2-type LS838_RS04020 14488c4b66a356cb5cde2b0554d84e77 201 TIGRFAM TIGR01866 cas_Csn2: CRISPR type II-A/NMEMI-associated protein Csn2 21 200 1.5E-17 T 09-03-2017 IPR010146 CRISPR-associated protein, Csn2-type LS838_RS08250 e0bd946f236410be6acafdb0bcaa2af0 333 SUPERFAMILY SSF53671 4 332 1.31E-96 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LS838_RS08250 e0bd946f236410be6acafdb0bcaa2af0 333 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 332 79.839 T 09-03-2017 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 LS838_RS08250 e0bd946f236410be6acafdb0bcaa2af0 333 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 331 1.7E-120 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LS838_RS08250 e0bd946f236410be6acafdb0bcaa2af0 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 1.1E-28 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LS838_RS08250 e0bd946f236410be6acafdb0bcaa2af0 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 310 321 1.1E-28 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LS838_RS08250 e0bd946f236410be6acafdb0bcaa2af0 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.1E-28 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LS838_RS08250 e0bd946f236410be6acafdb0bcaa2af0 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.1E-28 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LS838_RS08250 e0bd946f236410be6acafdb0bcaa2af0 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.1E-28 T 09-03-2017 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LS838_RS08250 e0bd946f236410be6acafdb0bcaa2af0 333 Gene3D G3DSA:3.40.50.1370 5 144 2.5E-54 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LS838_RS08250 e0bd946f236410be6acafdb0bcaa2af0 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 296 319 1.8E-23 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LS838_RS08250 e0bd946f236410be6acafdb0bcaa2af0 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 1.8E-23 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LS838_RS08250 e0bd946f236410be6acafdb0bcaa2af0 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.8E-23 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LS838_RS08250 e0bd946f236410be6acafdb0bcaa2af0 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.8E-23 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LS838_RS08250 e0bd946f236410be6acafdb0bcaa2af0 333 Gene3D G3DSA:3.40.50.1370 145 318 4.5E-65 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LS838_RS08250 e0bd946f236410be6acafdb0bcaa2af0 333 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LS838_RS08250 e0bd946f236410be6acafdb0bcaa2af0 333 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 329 2.5E-52 T 09-03-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 LS838_RS08250 e0bd946f236410be6acafdb0bcaa2af0 333 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 3.1E-45 T 09-03-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 LS838_RS03700 7aa834accbf76391f0f15c1873ddfb23 589 Pfam PF16124 RecQ zinc-binding 336 397 2.1E-13 T 09-03-2017 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain LS838_RS03700 7aa834accbf76391f0f15c1873ddfb23 589 SMART SM00490 243 324 3.8E-24 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS03700 7aa834accbf76391f0f15c1873ddfb23 589 Gene3D G3DSA:3.40.50.300 199 337 5.1E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03700 7aa834accbf76391f0f15c1873ddfb23 589 Gene3D G3DSA:3.40.50.300 5 194 3.7E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03700 7aa834accbf76391f0f15c1873ddfb23 589 SMART SM00341 515 588 2.9E-14 T 09-03-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 LS838_RS03700 7aa834accbf76391f0f15c1873ddfb23 589 Gene3D G3DSA:1.10.150.80 518 588 7.8E-21 T 09-03-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 LS838_RS03700 7aa834accbf76391f0f15c1873ddfb23 589 Gene3D G3DSA:1.10.10.10 338 509 2.2E-45 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS03700 7aa834accbf76391f0f15c1873ddfb23 589 SMART SM00956 404 507 9.7E-27 T 09-03-2017 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 LS838_RS03700 7aa834accbf76391f0f15c1873ddfb23 589 SUPERFAMILY SSF52540 57 345 1.13E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03700 7aa834accbf76391f0f15c1873ddfb23 589 SUPERFAMILY SSF47819 516 588 1.4E-21 T 09-03-2017 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 LS838_RS03700 7aa834accbf76391f0f15c1873ddfb23 589 Pfam PF00270 DEAD/DEAH box helicase 19 181 4.1E-22 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LS838_RS03700 7aa834accbf76391f0f15c1873ddfb23 589 SUPERFAMILY SSF46785 402 506 2.99E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS03700 7aa834accbf76391f0f15c1873ddfb23 589 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 5 588 2.5E-219 T 09-03-2017 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 LS838_RS03700 7aa834accbf76391f0f15c1873ddfb23 589 Pfam PF09382 RQC domain 403 510 9.4E-25 T 09-03-2017 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 LS838_RS03700 7aa834accbf76391f0f15c1873ddfb23 589 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 6 452 7.3E-141 T 09-03-2017 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 LS838_RS03700 7aa834accbf76391f0f15c1873ddfb23 589 Pfam PF00570 HRDC domain 519 585 1.5E-21 T 09-03-2017 IPR002121 HRDC domain GO:0003676|GO:0005622 LS838_RS03700 7aa834accbf76391f0f15c1873ddfb23 589 SMART SM00487 13 210 2.4E-35 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LS838_RS03700 7aa834accbf76391f0f15c1873ddfb23 589 Pfam PF00271 Helicase conserved C-terminal domain 218 324 5.7E-18 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS02480 a1dc2954c6ec38bddd59e53fdf4b5cc4 414 SMART SM00490 217 326 6.7E-18 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS02480 a1dc2954c6ec38bddd59e53fdf4b5cc4 414 SMART SM00487 15 209 9.3E-37 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LS838_RS02480 a1dc2954c6ec38bddd59e53fdf4b5cc4 414 SUPERFAMILY SSF52540 28 337 5.23E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02480 a1dc2954c6ec38bddd59e53fdf4b5cc4 414 Pfam PF00270 DEAD/DEAH box helicase 20 180 1.1E-32 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LS838_RS02480 a1dc2954c6ec38bddd59e53fdf4b5cc4 414 Pfam PF00271 Helicase conserved C-terminal domain 219 325 2.4E-20 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS02480 a1dc2954c6ec38bddd59e53fdf4b5cc4 414 Gene3D G3DSA:3.40.50.300 5 199 4.9E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02480 a1dc2954c6ec38bddd59e53fdf4b5cc4 414 Gene3D G3DSA:3.40.50.300 200 348 2.5E-35 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05980 e800e0a853d54c9df62089aa9ca45c56 328 SUPERFAMILY SSF51735 1 153 1.19E-39 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS05980 e800e0a853d54c9df62089aa9ca45c56 328 Gene3D G3DSA:3.30.360.10 137 307 1.5E-64 T 09-03-2017 LS838_RS05980 e800e0a853d54c9df62089aa9ca45c56 328 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 113 7.6E-27 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LS838_RS05980 e800e0a853d54c9df62089aa9ca45c56 328 PIRSF PIRSF000148 1 328 2.2E-112 T 09-03-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LS838_RS05980 e800e0a853d54c9df62089aa9ca45c56 328 SMART SM00859 2 117 4.3E-32 T 09-03-2017 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 LS838_RS05980 e800e0a853d54c9df62089aa9ca45c56 328 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 325 31.475 T 09-03-2017 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LS838_RS05980 e800e0a853d54c9df62089aa9ca45c56 328 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 135 311 1.7E-45 T 09-03-2017 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 LS838_RS05980 e800e0a853d54c9df62089aa9ca45c56 328 Gene3D G3DSA:3.40.50.720 1 136 2.3E-48 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS05980 e800e0a853d54c9df62089aa9ca45c56 328 SUPERFAMILY SSF55347 125 312 1.28E-61 T 09-03-2017 LS838_RS05980 e800e0a853d54c9df62089aa9ca45c56 328 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 2 326 5.1E-105 T 09-03-2017 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LS838_RS03760 5a792d827dea80e578aa2ce0afc7c203 139 SMART SM00866 1 131 1.8E-27 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LS838_RS03760 5a792d827dea80e578aa2ce0afc7c203 139 Gene3D G3DSA:3.40.1410.10 1 134 6.1E-44 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LS838_RS03760 5a792d827dea80e578aa2ce0afc7c203 139 Pfam PF07702 UTRA domain 2 124 5.0E-32 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LS838_RS03760 5a792d827dea80e578aa2ce0afc7c203 139 SUPERFAMILY SSF64288 1 135 9.58E-40 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LS838_RS02130 21b52542e0fc40b2f65c47c0d3d21575 152 SMART SM00731 4 146 2.1E-39 T 09-03-2017 IPR006640 SprT-like LS838_RS02130 21b52542e0fc40b2f65c47c0d3d21575 152 Pfam PF10263 SprT-like family 8 146 9.2E-19 T 09-03-2017 IPR006640 SprT-like LS838_RS04880 62ca5c5d75934ca43825a3a7d012e168 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 63 9.4E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS04880 62ca5c5d75934ca43825a3a7d012e168 309 Gene3D G3DSA:1.10.10.10 18 85 8.2E-12 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS04880 62ca5c5d75934ca43825a3a7d012e168 309 SUPERFAMILY SSF46785 17 85 2.16E-9 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS02625 9e34af9c27c1b90d37c13e0bd0358f32 731 Gene3D G3DSA:1.10.8.60 273 344 2.3E-31 T 09-03-2017 LS838_RS02625 9e34af9c27c1b90d37c13e0bd0358f32 731 SMART SM01086 628 715 1.6E-27 T 09-03-2017 IPR019489 Clp ATPase, C-terminal LS838_RS02625 9e34af9c27c1b90d37c13e0bd0358f32 731 SUPERFAMILY SSF52540 91 342 1.39E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02625 9e34af9c27c1b90d37c13e0bd0358f32 731 SUPERFAMILY SSF52540 406 702 9.52E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02625 9e34af9c27c1b90d37c13e0bd0358f32 731 Gene3D G3DSA:4.10.860.10 345 378 1.9E-4 T 09-03-2017 IPR001943 UVR domain GO:0005515 LS838_RS02625 9e34af9c27c1b90d37c13e0bd0358f32 731 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 224 236 - T 09-03-2017 IPR018368 ClpA/B, conserved site 1 GO:0005524 LS838_RS02625 9e34af9c27c1b90d37c13e0bd0358f32 731 Gene3D G3DSA:3.40.50.300 413 635 7.2E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02625 9e34af9c27c1b90d37c13e0bd0358f32 731 Gene3D G3DSA:3.40.50.300 92 271 3.8E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02625 9e34af9c27c1b90d37c13e0bd0358f32 731 Gene3D G3DSA:1.10.8.60 636 717 3.4E-26 T 09-03-2017 LS838_RS02625 9e34af9c27c1b90d37c13e0bd0358f32 731 Pfam PF07724 AAA domain (Cdc48 subfamily) 456 622 6.7E-51 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LS838_RS02625 9e34af9c27c1b90d37c13e0bd0358f32 731 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 491 509 - T 09-03-2017 IPR028299 ClpA/B, conserved site 2 LS838_RS02625 9e34af9c27c1b90d37c13e0bd0358f32 731 Pfam PF02151 UvrB/uvrC motif 344 377 2.5E-7 T 09-03-2017 IPR001943 UVR domain GO:0005515 LS838_RS02625 9e34af9c27c1b90d37c13e0bd0358f32 731 SMART SM00382 129 273 4.8E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS02625 9e34af9c27c1b90d37c13e0bd0358f32 731 SMART SM00382 457 629 7.9E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS02625 9e34af9c27c1b90d37c13e0bd0358f32 731 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 134 246 1.3E-11 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LS838_RS02625 9e34af9c27c1b90d37c13e0bd0358f32 731 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 628 699 1.7E-21 T 09-03-2017 IPR019489 Clp ATPase, C-terminal LS838_RS02625 9e34af9c27c1b90d37c13e0bd0358f32 731 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 568 582 4.8E-37 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 LS838_RS02625 9e34af9c27c1b90d37c13e0bd0358f32 731 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 506 524 4.8E-37 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 LS838_RS02625 9e34af9c27c1b90d37c13e0bd0358f32 731 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 461 479 4.8E-37 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 LS838_RS02625 9e34af9c27c1b90d37c13e0bd0358f32 731 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 535 553 4.8E-37 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 LS838_RS07950 3991802036e1ad33d5e2a22d9b36b86e 429 SUPERFAMILY SSF51445 8 342 1.74E-80 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS07950 3991802036e1ad33d5e2a22d9b36b86e 429 Pfam PF00128 Alpha amylase, catalytic domain 121 314 2.3E-12 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LS838_RS07950 3991802036e1ad33d5e2a22d9b36b86e 429 Pfam PF00128 Alpha amylase, catalytic domain 26 118 2.4E-26 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LS838_RS07950 3991802036e1ad33d5e2a22d9b36b86e 429 SMART SM00642 12 346 1.1E-23 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LS838_RS07950 3991802036e1ad33d5e2a22d9b36b86e 429 Gene3D G3DSA:3.20.20.80 8 329 1.9E-74 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS07005 6c9274572c96b640cd0696a149e23ff1 327 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 16 293 1.2E-31 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS07005 6c9274572c96b640cd0696a149e23ff1 327 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 18 37 3.6E-22 T 09-03-2017 LS838_RS07005 6c9274572c96b640cd0696a149e23ff1 327 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 3.6E-22 T 09-03-2017 LS838_RS07005 6c9274572c96b640cd0696a149e23ff1 327 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 3.6E-22 T 09-03-2017 LS838_RS07005 6c9274572c96b640cd0696a149e23ff1 327 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 239 255 3.6E-22 T 09-03-2017 LS838_RS07005 6c9274572c96b640cd0696a149e23ff1 327 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 113 131 3.6E-22 T 09-03-2017 LS838_RS07005 6c9274572c96b640cd0696a149e23ff1 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 275 293 1.7E-20 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LS838_RS07005 6c9274572c96b640cd0696a149e23ff1 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 1.7E-20 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LS838_RS07005 6c9274572c96b640cd0696a149e23ff1 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 17 39 1.7E-20 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LS838_RS07005 6c9274572c96b640cd0696a149e23ff1 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 114 122 1.7E-20 T 09-03-2017 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 LS838_RS07005 6c9274572c96b640cd0696a149e23ff1 327 SUPERFAMILY SSF51905 12 313 1.42E-39 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS07005 6c9274572c96b640cd0696a149e23ff1 327 Gene3D G3DSA:3.50.50.60 142 247 1.0E-14 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS07005 6c9274572c96b640cd0696a149e23ff1 327 Hamap MF_01685 Ferredoxin--NADP reductase. 15 327 34.979 T 09-03-2017 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 LS838_RS07005 6c9274572c96b640cd0696a149e23ff1 327 Gene3D G3DSA:3.50.50.60 14 128 1.5E-40 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS07005 6c9274572c96b640cd0696a149e23ff1 327 Gene3D G3DSA:3.50.50.60 248 319 1.5E-40 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS06225 6e7755a81f5b48d4f81c3a69f85da017 793 TIGRFAM TIGR00595 priA: primosomal protein N' 281 789 1.2E-203 T 09-03-2017 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 LS838_RS06225 6e7755a81f5b48d4f81c3a69f85da017 793 Pfam PF00271 Helicase conserved C-terminal domain 560 651 3.7E-9 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS06225 6e7755a81f5b48d4f81c3a69f85da017 793 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 792 24.753 T 09-03-2017 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 LS838_RS06225 6e7755a81f5b48d4f81c3a69f85da017 793 SMART SM00487 253 452 4.8E-23 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LS838_RS06225 6e7755a81f5b48d4f81c3a69f85da017 793 SUPERFAMILY SSF52540 521 699 1.68E-38 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06225 6e7755a81f5b48d4f81c3a69f85da017 793 SMART SM00490 555 652 1.0E-9 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS06225 6e7755a81f5b48d4f81c3a69f85da017 793 SUPERFAMILY SSF52540 254 436 4.73E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06225 6e7755a81f5b48d4f81c3a69f85da017 793 Pfam PF04851 Type III restriction enzyme, res subunit 256 420 3.8E-14 T 09-03-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 LS838_RS06225 6e7755a81f5b48d4f81c3a69f85da017 793 Gene3D G3DSA:3.40.50.300 519 695 9.4E-35 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06225 6e7755a81f5b48d4f81c3a69f85da017 793 Gene3D G3DSA:3.40.50.300 249 441 2.9E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00160 55fb4d9b935d5d39ece1a66b5b8b6b0a 277 Pfam PF08543 Phosphomethylpyrimidine kinase 71 256 6.8E-17 T 09-03-2017 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 LS838_RS00160 55fb4d9b935d5d39ece1a66b5b8b6b0a 277 Gene3D G3DSA:3.40.1190.20 2 269 5.9E-45 T 09-03-2017 IPR029056 Ribokinase-like LS838_RS00160 55fb4d9b935d5d39ece1a66b5b8b6b0a 277 SUPERFAMILY SSF53613 2 253 2.18E-46 T 09-03-2017 IPR029056 Ribokinase-like LS838_RS06495 eb012cc03cc3bcd4c4f2ee2d7b27592b 591 Pfam PF06100 MCRA family 22 521 1.2E-210 T 09-03-2017 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 LS838_RS06495 eb012cc03cc3bcd4c4f2ee2d7b27592b 591 Gene3D G3DSA:3.50.50.60 221 274 1.7E-11 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS06495 eb012cc03cc3bcd4c4f2ee2d7b27592b 591 Gene3D G3DSA:3.50.50.60 15 76 1.7E-11 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS06495 eb012cc03cc3bcd4c4f2ee2d7b27592b 591 SUPERFAMILY SSF51905 26 276 2.49E-19 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS07295 418c4ad001e1b8111234c09b27abba93 1191 Pfam PF07745 Glycosyl hydrolase family 53 521 921 2.5E-86 T 09-03-2017 IPR011683 Glycosyl hydrolase family 53 GO:0015926 LS838_RS07295 418c4ad001e1b8111234c09b27abba93 1191 Gene3D G3DSA:2.10.270.10 143 212 2.7E-10 T 09-03-2017 LS838_RS07295 418c4ad001e1b8111234c09b27abba93 1191 Gene3D G3DSA:3.20.20.80 508 929 8.6E-123 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS07295 418c4ad001e1b8111234c09b27abba93 1191 SUPERFAMILY SSF69360 150 207 6.54E-10 T 09-03-2017 LS838_RS07295 418c4ad001e1b8111234c09b27abba93 1191 SUPERFAMILY SSF51445 516 930 9.83E-90 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS03010 6de6d8496b9874b4734b7678c519a9d6 128 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 118 16.58 T 09-03-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 LS838_RS03010 6de6d8496b9874b4734b7678c519a9d6 128 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 113 4.0E-20 T 09-03-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 LS838_RS04500 72122e17c41b29b914549229e714f4bf 432 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 3 432 40.52 T 09-03-2017 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 LS838_RS04500 72122e17c41b29b914549229e714f4bf 432 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 7 431 6.5E-144 T 09-03-2017 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 LS838_RS04500 72122e17c41b29b914549229e714f4bf 432 SUPERFAMILY SSF50249 10 103 1.33E-19 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS04500 72122e17c41b29b914549229e714f4bf 432 Gene3D G3DSA:3.30.930.10 104 432 1.2E-105 T 09-03-2017 LS838_RS04500 72122e17c41b29b914549229e714f4bf 432 Gene3D G3DSA:2.40.50.140 8 103 1.3E-21 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS04500 72122e17c41b29b914549229e714f4bf 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 182 194 3.5E-15 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS04500 72122e17c41b29b914549229e714f4bf 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 387 401 3.5E-15 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS04500 72122e17c41b29b914549229e714f4bf 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 347 363 3.5E-15 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS04500 72122e17c41b29b914549229e714f4bf 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 198 211 3.5E-15 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS04500 72122e17c41b29b914549229e714f4bf 432 Pfam PF01336 OB-fold nucleic acid binding domain 18 96 3.4E-10 T 09-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 LS838_RS04500 72122e17c41b29b914549229e714f4bf 432 SUPERFAMILY SSF55681 98 431 1.04E-90 T 09-03-2017 LS838_RS04500 72122e17c41b29b914549229e714f4bf 432 Pfam PF00152 tRNA synthetases class II (D, K and N) 113 426 3.4E-73 T 09-03-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS09765 df3c2cfbe4a0d9b1b3f4f43c8ad6d7c9 456 Pfam PF13276 HTH-like domain 211 267 3.0E-17 T 09-03-2017 IPR025948 HTH-like domain LS838_RS09765 df3c2cfbe4a0d9b1b3f4f43c8ad6d7c9 456 SUPERFAMILY SSF53098 287 445 6.83E-33 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS09765 df3c2cfbe4a0d9b1b3f4f43c8ad6d7c9 456 Gene3D G3DSA:1.10.10.60 155 174 7.5E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS09765 df3c2cfbe4a0d9b1b3f4f43c8ad6d7c9 456 Gene3D G3DSA:1.10.10.60 61 109 7.5E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS09765 df3c2cfbe4a0d9b1b3f4f43c8ad6d7c9 456 Pfam PF00665 Integrase core domain 294 406 1.4E-24 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 LS838_RS09765 df3c2cfbe4a0d9b1b3f4f43c8ad6d7c9 456 Gene3D G3DSA:3.30.420.10 287 443 1.9E-26 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS09765 df3c2cfbe4a0d9b1b3f4f43c8ad6d7c9 456 SUPERFAMILY SSF48295 37 117 1.94E-9 T 09-03-2017 IPR010921 Trp repressor/replication initiator GO:0043565 LS838_RS01745 d94475f18247e20f210ae7f970435777 93 Pfam PF00990 Diguanylate cyclase, GGDEF domain 8 46 9.0E-6 T 09-03-2017 IPR000160 GGDEF domain LS838_RS01745 d94475f18247e20f210ae7f970435777 93 Pfam PF00990 Diguanylate cyclase, GGDEF domain 49 85 1.4E-4 T 09-03-2017 IPR000160 GGDEF domain LS838_RS01745 d94475f18247e20f210ae7f970435777 93 Gene3D G3DSA:3.30.70.270 1 46 2.3E-7 T 09-03-2017 LS838_RS01745 d94475f18247e20f210ae7f970435777 93 Gene3D G3DSA:3.30.70.270 49 89 7.0E-5 T 09-03-2017 LS838_RS01745 d94475f18247e20f210ae7f970435777 93 SUPERFAMILY SSF55073 1 89 1.18E-11 T 09-03-2017 IPR029787 Nucleotide cyclase LS838_RS05770 e7842272054ee4fa0781faf120be4f77 300 Pfam PF03466 LysR substrate binding domain 93 297 2.2E-17 T 09-03-2017 IPR005119 LysR, substrate-binding LS838_RS05770 e7842272054ee4fa0781faf120be4f77 300 Gene3D G3DSA:3.40.190.10 185 269 2.4E-5 T 09-03-2017 LS838_RS05770 e7842272054ee4fa0781faf120be4f77 300 Gene3D G3DSA:3.40.190.10 93 184 7.1E-14 T 09-03-2017 LS838_RS05770 e7842272054ee4fa0781faf120be4f77 300 SUPERFAMILY SSF46785 3 83 2.83E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS05770 e7842272054ee4fa0781faf120be4f77 300 SUPERFAMILY SSF53850 93 297 9.93E-19 T 09-03-2017 LS838_RS05770 e7842272054ee4fa0781faf120be4f77 300 Gene3D G3DSA:1.10.10.10 2 80 1.6E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS05770 e7842272054ee4fa0781faf120be4f77 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.0E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS05770 e7842272054ee4fa0781faf120be4f77 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS05770 e7842272054ee4fa0781faf120be4f77 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS05770 e7842272054ee4fa0781faf120be4f77 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS05940 e90e9a5efb734c7b539f544819a4b24d 265 Pfam PF01148 Cytidylyltransferase family 2 263 1.3E-64 T 09-03-2017 LS838_RS07350 d8274d0fe2a0133c1c324d5140f55bfe 370 SUPERFAMILY SSF50331 238 367 7.53E-28 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal LS838_RS07350 d8274d0fe2a0133c1c324d5140f55bfe 370 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS07350 d8274d0fe2a0133c1c324d5140f55bfe 370 SUPERFAMILY SSF52540 4 246 1.25E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07350 d8274d0fe2a0133c1c324d5140f55bfe 370 Gene3D G3DSA:2.40.50.100 353 367 1.7E-23 T 09-03-2017 LS838_RS07350 d8274d0fe2a0133c1c324d5140f55bfe 370 Gene3D G3DSA:2.40.50.100 241 288 1.7E-23 T 09-03-2017 LS838_RS07350 d8274d0fe2a0133c1c324d5140f55bfe 370 Gene3D G3DSA:3.40.50.300 3 232 1.0E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07350 d8274d0fe2a0133c1c324d5140f55bfe 370 Pfam PF00005 ABC transporter 22 163 6.2E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS07350 d8274d0fe2a0133c1c324d5140f55bfe 370 SMART SM00382 30 213 1.5E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS07350 d8274d0fe2a0133c1c324d5140f55bfe 370 Gene3D G3DSA:2.40.50.140 289 352 5.3E-15 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS07350 d8274d0fe2a0133c1c324d5140f55bfe 370 Pfam PF03459 TOBE domain 302 358 6.3E-10 T 09-03-2017 IPR005116 Transport-associated OB, type 1 LS838_RS01820 43e08d7232141b59d0d3908469a4706b 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.734 T 09-03-2017 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 LS838_RS01820 43e08d7232141b59d0d3908469a4706b 156 Gene3D G3DSA:1.10.455.10 8 156 3.4E-68 T 09-03-2017 IPR023798 Ribosomal protein S7 domain LS838_RS01820 43e08d7232141b59d0d3908469a4706b 156 SUPERFAMILY SSF47973 4 149 1.14E-62 T 09-03-2017 IPR023798 Ribosomal protein S7 domain LS838_RS01820 43e08d7232141b59d0d3908469a4706b 156 PIRSF PIRSF002122 4 156 2.4E-60 T 09-03-2017 IPR000235 Ribosomal protein S5/S7 GO:0006412 LS838_RS01820 43e08d7232141b59d0d3908469a4706b 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 09-03-2017 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01820 43e08d7232141b59d0d3908469a4706b 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 3.1E-69 T 09-03-2017 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 LS838_RS01820 43e08d7232141b59d0d3908469a4706b 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.9E-67 T 09-03-2017 IPR023798 Ribosomal protein S7 domain LS838_RS00960 70e9e5333bd8ad7fbd2b68feadf76fca 470 Pfam PF07282 Putative transposase DNA-binding domain 374 439 5.5E-18 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS00960 70e9e5333bd8ad7fbd2b68feadf76fca 470 Pfam PF01385 Probable transposase 270 351 3.3E-7 T 09-03-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 LS838_RS02715 a90b2d109534428fafae542edc608453 131 Pfam PF06619 Protein of unknown function (DUF1149) 5 127 2.1E-33 T 09-03-2017 IPR009530 Protein of unknown function DUF1149 LS838_RS02715 a90b2d109534428fafae542edc608453 131 Gene3D G3DSA:3.10.420.10 1 127 1.5E-34 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LS838_RS02715 a90b2d109534428fafae542edc608453 131 SUPERFAMILY SSF54611 5 127 6.87E-33 T 09-03-2017 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 LS838_RS06100 f6e2cc2e8d5f1441a5f6e7eb4bf00c9c 434 SMART SM00962 230 431 1.6E-108 T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LS838_RS06100 f6e2cc2e8d5f1441a5f6e7eb4bf00c9c 434 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 404 417 - T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LS838_RS06100 f6e2cc2e8d5f1441a5f6e7eb4bf00c9c 434 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 154 431 59.426 T 09-03-2017 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 LS838_RS06100 f6e2cc2e8d5f1441a5f6e7eb4bf00c9c 434 SUPERFAMILY SSF52540 229 423 7.63E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06100 f6e2cc2e8d5f1441a5f6e7eb4bf00c9c 434 SUPERFAMILY SSF47364 132 213 1.27E-17 T 09-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LS838_RS06100 f6e2cc2e8d5f1441a5f6e7eb4bf00c9c 434 Gene3D G3DSA:1.20.120.140 155 241 5.2E-27 T 09-03-2017 LS838_RS06100 f6e2cc2e8d5f1441a5f6e7eb4bf00c9c 434 SMART SM00382 229 409 1.1E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS06100 f6e2cc2e8d5f1441a5f6e7eb4bf00c9c 434 Gene3D G3DSA:3.40.50.300 242 430 5.0E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06100 f6e2cc2e8d5f1441a5f6e7eb4bf00c9c 434 SMART SM00963 130 211 1.3E-19 T 09-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LS838_RS06100 f6e2cc2e8d5f1441a5f6e7eb4bf00c9c 434 Pfam PF02881 SRP54-type protein, helical bundle domain 141 207 2.3E-13 T 09-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LS838_RS06100 f6e2cc2e8d5f1441a5f6e7eb4bf00c9c 434 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 155 430 5.4E-108 T 09-03-2017 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 LS838_RS06100 f6e2cc2e8d5f1441a5f6e7eb4bf00c9c 434 Pfam PF00448 SRP54-type protein, GTPase domain 230 430 7.1E-75 T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LS838_RS06455 2a81112f1989add9566d50ea2751446f 260 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 4 230 6.0E-60 T 09-03-2017 LS838_RS06455 2a81112f1989add9566d50ea2751446f 260 Pfam PF04204 Homoserine O-succinyltransferase 4 257 7.1E-61 T 09-03-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 LS838_RS06455 2a81112f1989add9566d50ea2751446f 260 PIRSF PIRSF000450 2 259 8.7E-59 T 09-03-2017 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 LS838_RS06455 2a81112f1989add9566d50ea2751446f 260 Gene3D G3DSA:3.40.50.880 4 258 3.1E-77 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS06455 2a81112f1989add9566d50ea2751446f 260 SUPERFAMILY SSF52317 3 258 7.63E-63 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS05605 4de89ccd39e70488fa7bb511463c69e0 174 Pfam PF02130 Uncharacterized protein family UPF0054 23 159 4.0E-38 T 09-03-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 LS838_RS05605 4de89ccd39e70488fa7bb511463c69e0 174 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 3 163 22.436 T 09-03-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 LS838_RS05605 4de89ccd39e70488fa7bb511463c69e0 174 Gene3D G3DSA:3.40.390.30 19 162 2.3E-41 T 09-03-2017 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 LS838_RS05605 4de89ccd39e70488fa7bb511463c69e0 174 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 44 160 2.4E-38 T 09-03-2017 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 LS838_RS05605 4de89ccd39e70488fa7bb511463c69e0 174 SUPERFAMILY SSF55486 19 160 1.34E-38 T 09-03-2017 LS838_RS05605 4de89ccd39e70488fa7bb511463c69e0 174 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 129 139 - T 09-03-2017 IPR020549 Endoribonuclease YbeY, conserved site LS838_RS02290 c910cfdbd2d5b7b2fd72407bc37d6f2a 688 Pfam PF05043 Mga helix-turn-helix domain 101 161 3.8E-7 T 09-03-2017 IPR007737 Mga helix-turn-helix domain LS838_RS02290 c910cfdbd2d5b7b2fd72407bc37d6f2a 688 Gene3D G3DSA:3.40.50.270 409 463 2.0E-6 T 09-03-2017 LS838_RS02290 c910cfdbd2d5b7b2fd72407bc37d6f2a 688 Pfam PF08279 HTH domain 6 61 1.1E-5 T 09-03-2017 IPR013196 Helix-turn-helix, type 11 LS838_RS02290 c910cfdbd2d5b7b2fd72407bc37d6f2a 688 Gene3D G3DSA:3.40.930.10 553 671 3.4E-12 T 09-03-2017 IPR002178 PTS EIIA type-2 domain LS838_RS02290 c910cfdbd2d5b7b2fd72407bc37d6f2a 688 SUPERFAMILY SSF52794 408 488 1.36E-8 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LS838_RS02290 c910cfdbd2d5b7b2fd72407bc37d6f2a 688 Gene3D G3DSA:1.10.10.10 4 46 1.1E-6 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS02290 c910cfdbd2d5b7b2fd72407bc37d6f2a 688 Gene3D G3DSA:1.10.10.10 81 151 1.0E-7 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS02290 c910cfdbd2d5b7b2fd72407bc37d6f2a 688 SUPERFAMILY SSF55804 538 670 2.27E-13 T 09-03-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 LS838_RS02290 c910cfdbd2d5b7b2fd72407bc37d6f2a 688 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 541 671 1.4E-9 T 09-03-2017 IPR002178 PTS EIIA type-2 domain LS838_RS03230 36d87db08968cfe5169a8ad74c78c2f9 479 SUPERFAMILY SSF47917 349 464 8.63E-51 T 09-03-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LS838_RS03230 36d87db08968cfe5169a8ad74c78c2f9 479 SUPERFAMILY SSF50615 2 76 4.71E-21 T 09-03-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LS838_RS03230 36d87db08968cfe5169a8ad74c78c2f9 479 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 75 1.9E-21 T 09-03-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LS838_RS03230 36d87db08968cfe5169a8ad74c78c2f9 479 Gene3D G3DSA:2.40.10.170 2 76 5.2E-28 T 09-03-2017 LS838_RS03230 36d87db08968cfe5169a8ad74c78c2f9 479 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 09-03-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LS838_RS03230 36d87db08968cfe5169a8ad74c78c2f9 479 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 56.09 T 09-03-2017 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 LS838_RS03230 36d87db08968cfe5169a8ad74c78c2f9 479 SUPERFAMILY SSF52540 79 351 4.45E-91 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03230 36d87db08968cfe5169a8ad74c78c2f9 479 Gene3D G3DSA:1.10.1140.10 349 464 3.4E-51 T 09-03-2017 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LS838_RS03230 36d87db08968cfe5169a8ad74c78c2f9 479 SMART SM00382 145 330 2.9E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS03230 36d87db08968cfe5169a8ad74c78c2f9 479 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 1.3E-244 T 09-03-2017 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 LS838_RS03230 36d87db08968cfe5169a8ad74c78c2f9 479 Gene3D G3DSA:3.40.50.300 78 346 6.3E-108 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03230 36d87db08968cfe5169a8ad74c78c2f9 479 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 133 346 1.0E-66 T 09-03-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LS838_RS06640 79fa1c3808bfde79521a9cabdff5ba7e 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.247 T 09-03-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LS838_RS06640 79fa1c3808bfde79521a9cabdff5ba7e 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 09-03-2017 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS06640 79fa1c3808bfde79521a9cabdff5ba7e 66 SUPERFAMILY SSF143034 2 62 1.19E-20 T 09-03-2017 LS838_RS06640 79fa1c3808bfde79521a9cabdff5ba7e 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 9.2E-18 T 09-03-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LS838_RS06640 79fa1c3808bfde79521a9cabdff5ba7e 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 9.2E-18 T 09-03-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LS838_RS06640 79fa1c3808bfde79521a9cabdff5ba7e 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 9.2E-18 T 09-03-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LS838_RS06640 79fa1c3808bfde79521a9cabdff5ba7e 66 Pfam PF01632 Ribosomal protein L35 2 62 2.6E-22 T 09-03-2017 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06640 79fa1c3808bfde79521a9cabdff5ba7e 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 5.2E-23 T 09-03-2017 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 LS838_RS05045 b6f4b1f92dbdf0d7b12de264ca57cc86 539 SUPERFAMILY SSF53850 29 536 6.73E-101 T 09-03-2017 LS838_RS05045 b6f4b1f92dbdf0d7b12de264ca57cc86 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 458 1.0E-66 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain LS838_RS05045 b6f4b1f92dbdf0d7b12de264ca57cc86 539 Gene3D G3DSA:3.40.190.10 214 306 7.4E-17 T 09-03-2017 LS838_RS05045 b6f4b1f92dbdf0d7b12de264ca57cc86 539 Gene3D G3DSA:3.10.105.10 307 509 1.2E-40 T 09-03-2017 LS838_RS05045 b6f4b1f92dbdf0d7b12de264ca57cc86 539 PIRSF PIRSF002741 1 539 8.4E-83 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LS838_RS05045 b6f4b1f92dbdf0d7b12de264ca57cc86 539 Gene3D G3DSA:3.90.76.10 45 213 3.3E-36 T 09-03-2017 LS838_RS04610 2a0d3be9c8782e23577be67173fef7be 563 Pfam PF05670 Domain of unknown function (DUF814) 449 531 1.1E-24 T 09-03-2017 IPR008532 Domain of unknown function DUF814 LS838_RS04610 2a0d3be9c8782e23577be67173fef7be 563 Gene3D G3DSA:3.40.970.40 239 284 4.2E-4 T 09-03-2017 LS838_RS04610 2a0d3be9c8782e23577be67173fef7be 563 Gene3D G3DSA:2.30.310.10 1 166 2.0E-56 T 09-03-2017 LS838_RS04610 2a0d3be9c8782e23577be67173fef7be 563 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 437 2.2E-140 T 09-03-2017 LS838_RS04440 fe25b2433560110407ca883881d8c27e 213 SMART SM01207 11 188 1.2E-77 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 LS838_RS04440 fe25b2433560110407ca883881d8c27e 213 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 187 4.9E-51 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 LS838_RS04440 fe25b2433560110407ca883881d8c27e 213 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 7 195 7.4E-55 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 LS838_RS04440 fe25b2433560110407ca883881d8c27e 213 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 8 196 18.616 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 LS838_RS05085 b781e59d8fba679604155ea777965886 188 Gene3D G3DSA:1.10.443.10 14 180 1.1E-31 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LS838_RS05085 b781e59d8fba679604155ea777965886 188 SUPERFAMILY SSF56349 16 180 5.3E-30 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LS838_RS05085 b781e59d8fba679604155ea777965886 188 Pfam PF00589 Phage integrase family 18 173 7.6E-19 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LS838_RS02600 2101ad56281319b574ea7e7bb0b00d31 287 Pfam PF00571 CBS domain 63 117 1.7E-5 T 09-03-2017 IPR000644 CBS domain LS838_RS02600 2101ad56281319b574ea7e7bb0b00d31 287 Gene3D G3DSA:3.10.580.10 48 190 3.2E-13 T 09-03-2017 LS838_RS02600 2101ad56281319b574ea7e7bb0b00d31 287 SUPERFAMILY SSF56176 196 286 2.51E-18 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LS838_RS02600 2101ad56281319b574ea7e7bb0b00d31 287 SMART SM01091 197 278 2.5E-19 T 09-03-2017 IPR005170 Transporter-associated domain LS838_RS02600 2101ad56281319b574ea7e7bb0b00d31 287 Gene3D G3DSA:3.30.465.10 191 279 1.6E-22 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LS838_RS02600 2101ad56281319b574ea7e7bb0b00d31 287 SUPERFAMILY SSF54631 49 185 1.04E-26 T 09-03-2017 LS838_RS02600 2101ad56281319b574ea7e7bb0b00d31 287 Pfam PF03471 Transporter associated domain 198 276 1.1E-17 T 09-03-2017 IPR005170 Transporter-associated domain LS838_RS03815 333870438701612c93e0186674066200 301 SUPERFAMILY SSF56349 7 293 8.54E-63 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LS838_RS03815 333870438701612c93e0186674066200 301 Gene3D G3DSA:1.10.443.10 115 294 4.6E-60 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LS838_RS03815 333870438701612c93e0186674066200 301 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 7 301 53.126 T 09-03-2017 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 LS838_RS03815 333870438701612c93e0186674066200 301 Pfam PF00589 Phage integrase family 116 286 1.8E-51 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LS838_RS03815 333870438701612c93e0186674066200 301 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 11 93 2.2E-18 T 09-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 LS838_RS03815 333870438701612c93e0186674066200 301 Gene3D G3DSA:1.10.150.130 8 102 3.9E-25 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal LS838_RS03815 333870438701612c93e0186674066200 301 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 13 300 2.4E-112 T 09-03-2017 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 LS838_RS03815 333870438701612c93e0186674066200 301 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 9 301 55.185 T 09-03-2017 IPR023009 Tyrosine recombinase XerC/XerD LS838_RS04665 f857d0c0edd7d2575b013f6b041432b9 336 Gene3D G3DSA:3.40.50.1370 166 306 3.1E-40 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LS838_RS04665 f857d0c0edd7d2575b013f6b041432b9 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 174 325 1.3E-20 T 09-03-2017 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 LS838_RS04665 f857d0c0edd7d2575b013f6b041432b9 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 26 167 3.7E-27 T 09-03-2017 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 LS838_RS04665 f857d0c0edd7d2575b013f6b041432b9 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 56 78 2.7E-28 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LS838_RS04665 f857d0c0edd7d2575b013f6b041432b9 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 154 171 2.7E-28 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LS838_RS04665 f857d0c0edd7d2575b013f6b041432b9 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 238 247 2.7E-28 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LS838_RS04665 f857d0c0edd7d2575b013f6b041432b9 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 94 103 2.7E-28 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LS838_RS04665 f857d0c0edd7d2575b013f6b041432b9 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 284 289 2.7E-28 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LS838_RS04665 f857d0c0edd7d2575b013f6b041432b9 336 PRINTS PR00101 Aspartate carbamoyltransferase signature 308 322 2.7E-28 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LS838_RS04665 f857d0c0edd7d2575b013f6b041432b9 336 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 66 73 - T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LS838_RS04665 f857d0c0edd7d2575b013f6b041432b9 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 155 166 1.3E-17 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LS838_RS04665 f857d0c0edd7d2575b013f6b041432b9 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 292 315 1.3E-17 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LS838_RS04665 f857d0c0edd7d2575b013f6b041432b9 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 280 289 1.3E-17 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LS838_RS04665 f857d0c0edd7d2575b013f6b041432b9 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 66 85 1.3E-17 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LS838_RS04665 f857d0c0edd7d2575b013f6b041432b9 336 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 27 327 5.3E-80 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LS838_RS04665 f857d0c0edd7d2575b013f6b041432b9 336 SUPERFAMILY SSF53671 23 329 3.93E-81 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LS838_RS04665 f857d0c0edd7d2575b013f6b041432b9 336 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 23 329 37.125 T 09-03-2017 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LS838_RS04665 f857d0c0edd7d2575b013f6b041432b9 336 Gene3D G3DSA:3.40.50.1370 26 165 8.7E-40 T 09-03-2017 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 LS838_RS07170 594c4ff2f4b5f6b0f1dc59407417e208 638 SMART SM00382 348 513 3.0E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS07170 594c4ff2f4b5f6b0f1dc59407417e208 638 SMART SM00382 28 234 3.5E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS07170 594c4ff2f4b5f6b0f1dc59407417e208 638 Gene3D G3DSA:3.40.50.300 322 546 3.9E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07170 594c4ff2f4b5f6b0f1dc59407417e208 638 Gene3D G3DSA:3.40.50.300 7 90 1.3E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07170 594c4ff2f4b5f6b0f1dc59407417e208 638 Gene3D G3DSA:3.40.50.300 124 276 1.3E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07170 594c4ff2f4b5f6b0f1dc59407417e208 638 Pfam PF00005 ABC transporter 20 189 7.1E-25 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS07170 594c4ff2f4b5f6b0f1dc59407417e208 638 Pfam PF00005 ABC transporter 339 469 1.8E-22 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS07170 594c4ff2f4b5f6b0f1dc59407417e208 638 SUPERFAMILY SSF52540 307 528 3.95E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07170 594c4ff2f4b5f6b0f1dc59407417e208 638 Pfam PF16326 ABC transporter C-terminal domain 557 629 3.1E-8 T 09-03-2017 IPR032524 ABC transporter Uup, C-terminal GO:0003677 LS838_RS07170 594c4ff2f4b5f6b0f1dc59407417e208 638 SUPERFAMILY SSF52540 8 235 3.05E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07170 594c4ff2f4b5f6b0f1dc59407417e208 638 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS07170 594c4ff2f4b5f6b0f1dc59407417e208 638 Pfam PF12848 ABC transporter 228 312 2.3E-28 T 09-03-2017 IPR032781 ABC-transporter extension domain LS838_RS00650 77fdd4df3593e78601482e1413c903bb 627 SUPERFAMILY SSF56425 404 554 8.82E-33 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS00650 77fdd4df3593e78601482e1413c903bb 627 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 237 610 5.2E-89 T 09-03-2017 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 LS838_RS00650 77fdd4df3593e78601482e1413c903bb 627 Pfam PF04205 FMN-binding domain 20 87 4.7E-11 T 09-03-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 LS838_RS00650 77fdd4df3593e78601482e1413c903bb 627 SUPERFAMILY SSF51905 194 224 1.32E-57 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS00650 77fdd4df3593e78601482e1413c903bb 627 SUPERFAMILY SSF51905 557 614 1.32E-57 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS00650 77fdd4df3593e78601482e1413c903bb 627 SUPERFAMILY SSF51905 251 419 1.32E-57 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS00650 77fdd4df3593e78601482e1413c903bb 627 SUPERFAMILY SSF51905 105 166 1.32E-57 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS00650 77fdd4df3593e78601482e1413c903bb 627 Gene3D G3DSA:3.50.50.60 554 614 5.7E-95 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS00650 77fdd4df3593e78601482e1413c903bb 627 Gene3D G3DSA:3.50.50.60 94 168 5.7E-95 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS00650 77fdd4df3593e78601482e1413c903bb 627 Gene3D G3DSA:3.50.50.60 214 402 5.7E-95 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS00650 77fdd4df3593e78601482e1413c903bb 627 SMART SM00900 14 89 7.3E-15 T 09-03-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 LS838_RS00650 77fdd4df3593e78601482e1413c903bb 627 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 574 589 2.0E-5 T 09-03-2017 LS838_RS00650 77fdd4df3593e78601482e1413c903bb 627 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 115 137 2.0E-5 T 09-03-2017 LS838_RS00650 77fdd4df3593e78601482e1413c903bb 627 Gene3D G3DSA:3.90.700.10 427 549 3.8E-31 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS00650 77fdd4df3593e78601482e1413c903bb 627 Pfam PF00890 FAD binding domain 115 163 3.1E-12 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS00650 77fdd4df3593e78601482e1413c903bb 627 Pfam PF00890 FAD binding domain 245 598 3.1E-59 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS04110 71567561bea42806fa324759b404a7a9 406 PIRSF PIRSF000447 1 406 4.9E-161 T 09-03-2017 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 LS838_RS04110 71567561bea42806fa324759b404a7a9 406 Gene3D G3DSA:3.40.47.10 259 405 8.8E-59 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LS838_RS04110 71567561bea42806fa324759b404a7a9 406 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 243 1.0E-52 T 09-03-2017 IPR014030 Beta-ketoacyl synthase, N-terminal LS838_RS04110 71567561bea42806fa324759b404a7a9 406 SMART SM00825 Beta-ketoacyl synthase 3 396 3.7E-15 T 09-03-2017 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain LS838_RS04110 71567561bea42806fa324759b404a7a9 406 SUPERFAMILY SSF53901 211 405 2.1E-65 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LS838_RS04110 71567561bea42806fa324759b404a7a9 406 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 251 362 8.4E-35 T 09-03-2017 IPR014031 Beta-ketoacyl synthase, C-terminal LS838_RS04110 71567561bea42806fa324759b404a7a9 406 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 403 5.7E-173 T 09-03-2017 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 LS838_RS04110 71567561bea42806fa324759b404a7a9 406 Gene3D G3DSA:3.40.47.10 5 256 1.8E-69 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LS838_RS04110 71567561bea42806fa324759b404a7a9 406 SUPERFAMILY SSF53901 2 248 3.85E-68 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LS838_RS07755 a9d6089105086f243f2946d113e0e7a5 251 SUPERFAMILY SSF53697 88 222 4.73E-8 T 09-03-2017 LS838_RS07755 a9d6089105086f243f2946d113e0e7a5 251 Gene3D G3DSA:1.10.10.10 8 65 1.8E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS07755 a9d6089105086f243f2946d113e0e7a5 251 Gene3D G3DSA:3.40.50.10490 66 179 1.5E-7 T 09-03-2017 LS838_RS07755 a9d6089105086f243f2946d113e0e7a5 251 SUPERFAMILY SSF46689 1 76 2.51E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS07755 a9d6089105086f243f2946d113e0e7a5 251 Pfam PF01418 Helix-turn-helix domain, rpiR family 9 76 4.0E-18 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 LS838_RS08260 b64ef745edd76e627dba54b4ede472db 239 Pfam PF03483 B3/4 domain 70 203 1.8E-18 T 09-03-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 LS838_RS08260 b64ef745edd76e627dba54b4ede472db 239 SMART SM00873 67 220 1.4E-11 T 09-03-2017 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 LS838_RS08260 b64ef745edd76e627dba54b4ede472db 239 Gene3D G3DSA:3.50.40.10 81 202 1.2E-12 T 09-03-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 LS838_RS08260 b64ef745edd76e627dba54b4ede472db 239 SUPERFAMILY SSF56037 59 229 1.67E-28 T 09-03-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 LS838_RS07365 f753bf784aabae9d8f05adabe00ec8cc 293 Gene3D G3DSA:1.20.58.370 8 42 2.2E-7 T 09-03-2017 LS838_RS07365 f753bf784aabae9d8f05adabe00ec8cc 293 SUPERFAMILY SSF160964 7 42 6.67E-8 T 09-03-2017 LS838_RS07365 f753bf784aabae9d8f05adabe00ec8cc 293 Gene3D G3DSA:1.10.3720.10 61 287 1.1E-63 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS07365 f753bf784aabae9d8f05adabe00ec8cc 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 288 9.5E-19 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS07365 f753bf784aabae9d8f05adabe00ec8cc 293 SUPERFAMILY SSF161098 54 281 2.35E-59 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS07570 319c1685274efff355e02450e8f3d72e 464 Pfam PF00171 Aldehyde dehydrogenase family 20 283 2.2E-25 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LS838_RS07570 319c1685274efff355e02450e8f3d72e 464 Gene3D G3DSA:3.40.605.10 19 239 6.7E-24 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LS838_RS07570 319c1685274efff355e02450e8f3d72e 464 SUPERFAMILY SSF53720 22 461 1.05E-77 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LS838_RS07570 319c1685274efff355e02450e8f3d72e 464 Gene3D G3DSA:3.40.309.10 240 287 2.1E-28 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LS838_RS07570 319c1685274efff355e02450e8f3d72e 464 Gene3D G3DSA:3.40.309.10 325 417 2.1E-28 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LS838_RS07985 d2278ee60d5f51d1025d6edec214eb71 456 PIRSF PIRSF006060 1 456 5.6E-61 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LS838_RS07985 d2278ee60d5f51d1025d6edec214eb71 456 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 09-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LS838_RS07985 d2278ee60d5f51d1025d6edec214eb71 456 Pfam PF00324 Amino acid permease 18 434 1.0E-84 T 09-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LS838_RS05400 131c739dda637150363593922841c5a0 188 ProSitePatterns PS00761 Signal peptidases I signature 3. 145 158 - T 09-03-2017 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 LS838_RS05400 131c739dda637150363593922841c5a0 188 Gene3D G3DSA:2.10.109.10 35 96 2.9E-35 T 09-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain LS838_RS05400 131c739dda637150363593922841c5a0 188 Gene3D G3DSA:2.10.109.10 140 184 2.9E-35 T 09-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain LS838_RS05400 131c739dda637150363593922841c5a0 188 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 23 180 7.8E-43 T 09-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LS838_RS05400 131c739dda637150363593922841c5a0 188 SUPERFAMILY SSF51306 37 184 1.44E-49 T 09-03-2017 IPR015927 Peptidase S24/S26A/S26B/S26C LS838_RS05400 131c739dda637150363593922841c5a0 188 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 140 159 2.0E-16 T 09-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LS838_RS05400 131c739dda637150363593922841c5a0 188 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 38 54 2.0E-16 T 09-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LS838_RS05400 131c739dda637150363593922841c5a0 188 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 86 98 2.0E-16 T 09-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LS838_RS05400 131c739dda637150363593922841c5a0 188 Pfam PF00717 Peptidase S24-like 45 110 1.6E-17 T 09-03-2017 IPR019759 Peptidase S24/S26A/S26B LS838_RS07395 aa44d648003078ed828b2b02a3fed42c 416 SUPERFAMILY SSF111352 2 385 1.57E-108 T 09-03-2017 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 LS838_RS07395 aa44d648003078ed828b2b02a3fed42c 416 Pfam PF00909 Ammonium Transporter Family 7 403 6.6E-106 T 09-03-2017 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 LS838_RS07395 aa44d648003078ed828b2b02a3fed42c 416 Gene3D G3DSA:1.10.3430.10 1 385 1.0E-115 T 09-03-2017 IPR029020 Ammonium/urea transporter LS838_RS07395 aa44d648003078ed828b2b02a3fed42c 416 TIGRFAM TIGR00836 amt: ammonium transporter 5 403 2.3E-120 T 09-03-2017 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 LS838_RS07395 aa44d648003078ed828b2b02a3fed42c 416 ProSitePatterns PS01219 Ammonium transporters signature. 160 185 - T 09-03-2017 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 LS838_RS09485 a097b755b762b1ae8413f27049136b7a 351 Gene3D G3DSA:3.40.140.10 2 128 2.6E-32 T 09-03-2017 LS838_RS09485 a097b755b762b1ae8413f27049136b7a 351 SUPERFAMILY SSF53597 149 348 4.82E-40 T 09-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 LS838_RS09485 a097b755b762b1ae8413f27049136b7a 351 Gene3D G3DSA:3.40.430.10 129 345 5.5E-53 T 09-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 LS838_RS09485 a097b755b762b1ae8413f27049136b7a 351 SUPERFAMILY SSF53927 4 145 6.2E-41 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 LS838_RS09485 a097b755b762b1ae8413f27049136b7a 351 PIRSF PIRSF006769 1 351 8.0E-97 T 09-03-2017 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 LS838_RS09485 a097b755b762b1ae8413f27049136b7a 351 Pfam PF01872 RibD C-terminal domain 149 342 8.1E-33 T 09-03-2017 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 LS838_RS09485 a097b755b762b1ae8413f27049136b7a 351 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 90 - T 09-03-2017 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 LS838_RS09485 a097b755b762b1ae8413f27049136b7a 351 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 343 5.6E-85 T 09-03-2017 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 LS838_RS09485 a097b755b762b1ae8413f27049136b7a 351 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 101 1.0E-19 T 09-03-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 LS838_RS05540 ed2b76e5a36706ed21c9e2a8ff717b10 640 Gene3D G3DSA:1.20.1250.20 252 448 3.8E-10 T 09-03-2017 LS838_RS05540 ed2b76e5a36706ed21c9e2a8ff717b10 640 Gene3D G3DSA:1.20.1250.20 15 223 5.3E-10 T 09-03-2017 LS838_RS05540 ed2b76e5a36706ed21c9e2a8ff717b10 640 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 14 467 1.4E-137 T 09-03-2017 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 LS838_RS05540 ed2b76e5a36706ed21c9e2a8ff717b10 640 Pfam PF13347 MFS/sugar transport protein 17 449 1.0E-83 T 09-03-2017 LS838_RS05540 ed2b76e5a36706ed21c9e2a8ff717b10 640 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 74 99 - T 09-03-2017 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 LS838_RS05540 ed2b76e5a36706ed21c9e2a8ff717b10 640 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 493 616 9.3E-45 T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LS838_RS05540 ed2b76e5a36706ed21c9e2a8ff717b10 640 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 555 567 - T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LS838_RS05540 ed2b76e5a36706ed21c9e2a8ff717b10 640 SUPERFAMILY SSF103473 8 452 6.98E-28 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS05540 ed2b76e5a36706ed21c9e2a8ff717b10 640 Gene3D G3DSA:2.70.70.10 487 639 6.7E-55 T 09-03-2017 LS838_RS05540 ed2b76e5a36706ed21c9e2a8ff717b10 640 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 493 613 1.2E-42 T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LS838_RS05540 ed2b76e5a36706ed21c9e2a8ff717b10 640 SUPERFAMILY SSF51261 487 637 2.27E-48 T 09-03-2017 IPR011055 Duplicated hybrid motif LS838_RS06710 875d5608c85d1fe474c4f9edce6e87ea 219 Gene3D G3DSA:3.40.50.1390 65 184 1.3E-19 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS06710 875d5608c85d1fe474c4f9edce6e87ea 219 Gene3D G3DSA:1.10.1660.10 2 50 8.1E-13 T 09-03-2017 LS838_RS06710 875d5608c85d1fe474c4f9edce6e87ea 219 SUPERFAMILY SSF46955 4 51 1.14E-11 T 09-03-2017 IPR009061 Putative DNA-binding domain LS838_RS06710 875d5608c85d1fe474c4f9edce6e87ea 219 SMART SM00857 65 205 2.3E-21 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS06710 875d5608c85d1fe474c4f9edce6e87ea 219 Pfam PF00376 MerR family regulatory protein 6 42 4.7E-12 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS06710 875d5608c85d1fe474c4f9edce6e87ea 219 ProSitePatterns PS00397 Site-specific recombinases active site. 68 76 - T 09-03-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 LS838_RS06710 875d5608c85d1fe474c4f9edce6e87ea 219 Pfam PF00239 Resolvase, N terminal domain 66 195 2.1E-20 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS06710 875d5608c85d1fe474c4f9edce6e87ea 219 SUPERFAMILY SSF53041 65 198 1.96E-23 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS06710 875d5608c85d1fe474c4f9edce6e87ea 219 SMART SM00422 5 67 3.6E-7 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS03845 557e675da8ff5a876c5255b0b4e250cb 131 SUPERFAMILY SSF54106 83 127 3.27E-11 T 09-03-2017 IPR018392 LysM domain LS838_RS03845 557e675da8ff5a876c5255b0b4e250cb 131 Gene3D G3DSA:3.10.350.10 82 128 2.1E-17 T 09-03-2017 IPR018392 LysM domain LS838_RS03845 557e675da8ff5a876c5255b0b4e250cb 131 Pfam PF01476 LysM domain 85 127 2.9E-14 T 09-03-2017 IPR018392 LysM domain LS838_RS03845 557e675da8ff5a876c5255b0b4e250cb 131 SMART SM00257 84 128 2.1E-13 T 09-03-2017 IPR018392 LysM domain LS838_RS08700 1c2baa6e28936e374f59a12da7eeb27f 624 Pfam PF00367 phosphotransferase system, EIIB 11 44 1.9E-15 T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LS838_RS08700 1c2baa6e28936e374f59a12da7eeb27f 624 SUPERFAMILY SSF55604 9 82 4.97E-23 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LS838_RS08700 1c2baa6e28936e374f59a12da7eeb27f 624 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 22 39 - T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LS838_RS08700 1c2baa6e28936e374f59a12da7eeb27f 624 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 554 566 - T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LS838_RS08700 1c2baa6e28936e374f59a12da7eeb27f 624 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 491 615 1.8E-49 T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LS838_RS08700 1c2baa6e28936e374f59a12da7eeb27f 624 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 6 615 8.4E-199 T 09-03-2017 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 LS838_RS08700 1c2baa6e28936e374f59a12da7eeb27f 624 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 492 611 1.1E-42 T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LS838_RS08700 1c2baa6e28936e374f59a12da7eeb27f 624 Gene3D G3DSA:2.70.70.10 485 618 1.9E-56 T 09-03-2017 LS838_RS08700 1c2baa6e28936e374f59a12da7eeb27f 624 Gene3D G3DSA:3.30.1360.60 5 83 6.1E-29 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LS838_RS08700 1c2baa6e28936e374f59a12da7eeb27f 624 SUPERFAMILY SSF51261 486 619 4.53E-52 T 09-03-2017 IPR011055 Duplicated hybrid motif LS838_RS08700 1c2baa6e28936e374f59a12da7eeb27f 624 Pfam PF02378 Phosphotransferase system, EIIC 121 401 7.9E-36 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LS838_RS07415 7de2c8e16d03e124aeeeac248701a153 184 SMART SM00738 6 117 1.3E-48 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 LS838_RS07415 7de2c8e16d03e124aeeeac248701a153 184 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 182 1.9E-55 T 09-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 LS838_RS07415 7de2c8e16d03e124aeeeac248701a153 184 Gene3D G3DSA:3.30.70.940 6 118 1.8E-44 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 LS838_RS07415 7de2c8e16d03e124aeeeac248701a153 184 SUPERFAMILY SSF50104 126 181 8.02E-15 T 09-03-2017 IPR008991 Translation protein SH3-like domain LS838_RS07415 7de2c8e16d03e124aeeeac248701a153 184 SMART SM00739 128 155 0.0011 T 09-03-2017 IPR005824 KOW LS838_RS07415 7de2c8e16d03e124aeeeac248701a153 184 Gene3D G3DSA:2.30.30.30 122 182 5.1E-22 T 09-03-2017 IPR014722 Ribosomal protein L2 domain 2 LS838_RS07415 7de2c8e16d03e124aeeeac248701a153 184 Pfam PF02357 Transcription termination factor nusG 7 114 4.3E-27 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 LS838_RS07415 7de2c8e16d03e124aeeeac248701a153 184 SUPERFAMILY SSF82679 6 118 3.01E-37 T 09-03-2017 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 LS838_RS07415 7de2c8e16d03e124aeeeac248701a153 184 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 182 25.658 T 09-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 LS838_RS07415 7de2c8e16d03e124aeeeac248701a153 184 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 2.2E-10 T 09-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 LS838_RS07415 7de2c8e16d03e124aeeeac248701a153 184 PRINTS PR00338 Transcription termination factor NUSG signature 158 174 2.2E-10 T 09-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 LS838_RS07415 7de2c8e16d03e124aeeeac248701a153 184 PRINTS PR00338 Transcription termination factor NUSG signature 140 155 2.2E-10 T 09-03-2017 IPR001062 Transcription antitermination protein, NusG GO:0032784 LS838_RS05070 31f82249b317491dfcc7a596bd6c84c9 146 SUPERFAMILY SSF55073 56 140 2.43E-15 T 09-03-2017 IPR029787 Nucleotide cyclase LS838_RS05070 31f82249b317491dfcc7a596bd6c84c9 146 Pfam PF00990 Diguanylate cyclase, GGDEF domain 52 138 2.0E-17 T 09-03-2017 IPR000160 GGDEF domain LS838_RS05070 31f82249b317491dfcc7a596bd6c84c9 146 Gene3D G3DSA:3.30.70.270 53 142 1.3E-18 T 09-03-2017 LS838_RS05070 31f82249b317491dfcc7a596bd6c84c9 146 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 48 140 2.0E-16 T 09-03-2017 IPR000160 GGDEF domain LS838_RS05070 31f82249b317491dfcc7a596bd6c84c9 146 Pfam PF04474 Protein of unknown function (DUF554) 4 41 3.7E-6 T 09-03-2017 IPR007563 Protein of unknown function DUF554 LS838_RS01020 8822e0081532222d42ff3ce7cef6833d 382 SUPERFAMILY SSF51556 53 350 2.35E-94 T 09-03-2017 IPR032466 Metal-dependent hydrolase LS838_RS01020 8822e0081532222d42ff3ce7cef6833d 382 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 22 376 4.9E-81 T 09-03-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 LS838_RS01020 8822e0081532222d42ff3ce7cef6833d 382 Gene3D G3DSA:3.20.20.140 54 329 1.6E-95 T 09-03-2017 LS838_RS01020 8822e0081532222d42ff3ce7cef6833d 382 Gene3D G3DSA:2.30.40.10 330 378 1.2E-7 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LS838_RS01020 8822e0081532222d42ff3ce7cef6833d 382 Pfam PF01979 Amidohydrolase family 50 378 1.7E-18 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 LS838_RS01020 8822e0081532222d42ff3ce7cef6833d 382 SUPERFAMILY SSF51338 350 381 3.78E-9 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LS838_RS01020 8822e0081532222d42ff3ce7cef6833d 382 SUPERFAMILY SSF51338 1 52 3.78E-9 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LS838_RS01020 8822e0081532222d42ff3ce7cef6833d 382 PIRSF PIRSF038994 1 382 5.8E-110 T 09-03-2017 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 LS838_RS05960 70bd6b41c5ea5723c6e1a36b75838c1d 342 SUPERFAMILY SSF54713 56 146 1.83E-21 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LS838_RS05960 70bd6b41c5ea5723c6e1a36b75838c1d 342 SUPERFAMILY SSF54713 152 225 1.73E-14 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LS838_RS05960 70bd6b41c5ea5723c6e1a36b75838c1d 342 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 341 1.2E-97 T 09-03-2017 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LS838_RS05960 70bd6b41c5ea5723c6e1a36b75838c1d 342 Gene3D G3DSA:3.30.479.20 57 146 3.8E-16 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LS838_RS05960 70bd6b41c5ea5723c6e1a36b75838c1d 342 Hamap MF_00050 Elongation factor Ts [tsf]. 1 340 67.719 T 09-03-2017 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LS838_RS05960 70bd6b41c5ea5723c6e1a36b75838c1d 342 SUPERFAMILY SSF46934 3 56 1.82E-16 T 09-03-2017 IPR009060 UBA-like GO:0005515 LS838_RS05960 70bd6b41c5ea5723c6e1a36b75838c1d 342 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 09-03-2017 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LS838_RS05960 70bd6b41c5ea5723c6e1a36b75838c1d 342 SUPERFAMILY SSF54713 235 341 1.64E-28 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LS838_RS05960 70bd6b41c5ea5723c6e1a36b75838c1d 342 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 09-03-2017 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LS838_RS05960 70bd6b41c5ea5723c6e1a36b75838c1d 342 Gene3D G3DSA:1.10.8.10 2 55 1.2E-22 T 09-03-2017 LS838_RS05960 70bd6b41c5ea5723c6e1a36b75838c1d 342 Pfam PF00889 Elongation factor TS 71 323 3.2E-67 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LS838_RS05960 70bd6b41c5ea5723c6e1a36b75838c1d 342 Gene3D G3DSA:1.10.286.20 239 277 9.9E-7 T 09-03-2017 LS838_RS05960 70bd6b41c5ea5723c6e1a36b75838c1d 342 Gene3D G3DSA:3.30.479.20 286 322 1.8E-29 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LS838_RS05960 70bd6b41c5ea5723c6e1a36b75838c1d 342 Gene3D G3DSA:3.30.479.20 153 189 1.8E-29 T 09-03-2017 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LS838_RS05620 28d8d6f543336419d9b646282618626f 285 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 19 283 56.448 T 09-03-2017 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein LS838_RS05620 28d8d6f543336419d9b646282618626f 285 Pfam PF03618 Kinase/pyrophosphorylase 21 277 1.8E-90 T 09-03-2017 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 LS838_RS05620 28d8d6f543336419d9b646282618626f 285 SUPERFAMILY SSF52540 194 280 2.17E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05445 fd55cb6df214087cecdfaa91ecf7f6d2 576 Gene3D G3DSA:3.50.50.60 84 336 7.3E-68 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS05445 fd55cb6df214087cecdfaa91ecf7f6d2 576 Gene3D G3DSA:3.50.50.60 509 574 7.3E-68 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS05445 fd55cb6df214087cecdfaa91ecf7f6d2 576 SUPERFAMILY SSF51905 512 575 9.28E-49 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS05445 fd55cb6df214087cecdfaa91ecf7f6d2 576 SUPERFAMILY SSF51905 93 355 9.28E-49 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS05445 fd55cb6df214087cecdfaa91ecf7f6d2 576 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 529 544 5.3E-8 T 09-03-2017 LS838_RS05445 fd55cb6df214087cecdfaa91ecf7f6d2 576 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 282 307 5.3E-8 T 09-03-2017 LS838_RS05445 fd55cb6df214087cecdfaa91ecf7f6d2 576 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 101 123 5.3E-8 T 09-03-2017 LS838_RS05445 fd55cb6df214087cecdfaa91ecf7f6d2 576 Pfam PF04205 FMN-binding domain 14 84 1.6E-11 T 09-03-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 LS838_RS05445 fd55cb6df214087cecdfaa91ecf7f6d2 576 Pfam PF00890 FAD binding domain 101 545 2.3E-54 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS05445 fd55cb6df214087cecdfaa91ecf7f6d2 576 Gene3D G3DSA:3.90.700.10 352 500 4.1E-24 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS05445 fd55cb6df214087cecdfaa91ecf7f6d2 576 SUPERFAMILY SSF56425 350 513 1.67E-22 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS05445 fd55cb6df214087cecdfaa91ecf7f6d2 576 SMART SM00900 14 86 1.6E-15 T 09-03-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 LS838_RS03235 429e652311776eb7b3f84d39a79047b6 146 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 6 140 20.941 T 09-03-2017 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LS838_RS03235 429e652311776eb7b3f84d39a79047b6 146 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 8 141 1.1E-25 T 09-03-2017 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LS838_RS03235 429e652311776eb7b3f84d39a79047b6 146 SUPERFAMILY SSF51344 7 92 6.93E-20 T 09-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LS838_RS03235 429e652311776eb7b3f84d39a79047b6 146 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 94 140 7.8E-13 T 09-03-2017 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 LS838_RS03235 429e652311776eb7b3f84d39a79047b6 146 Gene3D G3DSA:1.20.5.440 98 142 4.2E-14 T 09-03-2017 LS838_RS03235 429e652311776eb7b3f84d39a79047b6 146 Gene3D G3DSA:2.60.15.10 8 97 3.7E-24 T 09-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LS838_RS03235 429e652311776eb7b3f84d39a79047b6 146 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 25 96 4.0E-12 T 09-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LS838_RS03235 429e652311776eb7b3f84d39a79047b6 146 SUPERFAMILY SSF46604 95 143 7.32E-5 T 09-03-2017 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 LS838_RS03235 429e652311776eb7b3f84d39a79047b6 146 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 8 90 1.5E-22 T 09-03-2017 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 LS838_RS08070 70aeea600bc8d4d6fedc8f4881b49de3 153 Hamap MF_00023 SsrA-binding protein [smpB]. 1 153 69.873 T 09-03-2017 IPR000037 SsrA-binding protein GO:0003723 LS838_RS08070 70aeea600bc8d4d6fedc8f4881b49de3 153 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 11 134 4.0E-58 T 09-03-2017 IPR000037 SsrA-binding protein GO:0003723 LS838_RS08070 70aeea600bc8d4d6fedc8f4881b49de3 153 ProSitePatterns PS01317 SsrA-binding protein. 29 41 - T 09-03-2017 IPR020081 SsrA-binding protein, conserved site LS838_RS08070 70aeea600bc8d4d6fedc8f4881b49de3 153 TIGRFAM TIGR00086 smpB: SsrA-binding protein 11 151 2.6E-56 T 09-03-2017 IPR000037 SsrA-binding protein GO:0003723 LS838_RS08070 70aeea600bc8d4d6fedc8f4881b49de3 153 Pfam PF01668 SmpB protein 11 74 1.4E-28 T 09-03-2017 IPR000037 SsrA-binding protein GO:0003723 LS838_RS08070 70aeea600bc8d4d6fedc8f4881b49de3 153 SUPERFAMILY SSF74982 5 134 6.8E-51 T 09-03-2017 IPR023620 Small protein B LS838_RS08070 70aeea600bc8d4d6fedc8f4881b49de3 153 Gene3D G3DSA:2.40.280.10 10 129 1.2E-49 T 09-03-2017 IPR023620 Small protein B LS838_RS06615 2c148ebf4915ea1c765509b45ecb3a27 115 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 3.5E-23 T 09-03-2017 LS838_RS06615 2c148ebf4915ea1c765509b45ecb3a27 115 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 1.7E-31 T 09-03-2017 IPR004394 Protein Iojap/ribosomal silencing factor RsfS LS838_RS06615 2c148ebf4915ea1c765509b45ecb3a27 115 SUPERFAMILY SSF81301 2 113 1.34E-35 T 09-03-2017 LS838_RS06615 2c148ebf4915ea1c765509b45ecb3a27 115 Gene3D G3DSA:3.30.460.10 3 107 5.4E-32 T 09-03-2017 LS838_RS06615 2c148ebf4915ea1c765509b45ecb3a27 115 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 22.781 T 09-03-2017 IPR004394 Protein Iojap/ribosomal silencing factor RsfS LS838_RS03125 9788992c27ab69e8c367b4312a794931 521 SUPERFAMILY SSF47384 263 347 4.9E-17 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS03125 9788992c27ab69e8c367b4312a794931 521 SMART SM00387 391 504 1.1E-29 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS03125 9788992c27ab69e8c367b4312a794931 521 SMART SM00388 280 346 3.2E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS03125 9788992c27ab69e8c367b4312a794931 521 SMART SM00304 220 272 4.7E-12 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LS838_RS03125 9788992c27ab69e8c367b4312a794931 521 SUPERFAMILY SSF158472 222 269 2.88E-9 T 09-03-2017 LS838_RS03125 9788992c27ab69e8c367b4312a794931 521 Gene3D G3DSA:1.10.287.130 272 342 4.8E-16 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS03125 9788992c27ab69e8c367b4312a794931 521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 482 3.5E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LS838_RS03125 9788992c27ab69e8c367b4312a794931 521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 441 3.5E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LS838_RS03125 9788992c27ab69e8c367b4312a794931 521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 501 3.5E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LS838_RS03125 9788992c27ab69e8c367b4312a794931 521 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 455 3.5E-13 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LS838_RS03125 9788992c27ab69e8c367b4312a794931 521 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 392 500 1.2E-22 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS03125 9788992c27ab69e8c367b4312a794931 521 SUPERFAMILY SSF55874 335 500 1.63E-39 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS03125 9788992c27ab69e8c367b4312a794931 521 Gene3D G3DSA:3.30.565.10 347 502 1.7E-41 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS03125 9788992c27ab69e8c367b4312a794931 521 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 346 3.7E-13 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS03125 9788992c27ab69e8c367b4312a794931 521 Pfam PF00672 HAMP domain 202 268 3.7E-16 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LS838_RS08340 079ed0dc51005ae1b0f0d685642d5036 461 SUPERFAMILY SSF53720 4 452 4.32E-125 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LS838_RS08340 079ed0dc51005ae1b0f0d685642d5036 461 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 228 235 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LS838_RS08340 079ed0dc51005ae1b0f0d685642d5036 461 Gene3D G3DSA:3.40.605.10 3 238 2.3E-58 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LS838_RS08340 079ed0dc51005ae1b0f0d685642d5036 461 Gene3D G3DSA:3.40.309.10 239 427 4.3E-54 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LS838_RS08340 079ed0dc51005ae1b0f0d685642d5036 461 Pfam PF00171 Aldehyde dehydrogenase family 3 448 2.0E-118 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LS838_RS01340 f35dfb439f98efa016b53c66a6695362 437 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 64 75 - T 09-03-2017 IPR000169 Cysteine peptidase, cysteine active site LS838_RS01340 f35dfb439f98efa016b53c66a6695362 437 Pfam PF03051 Peptidase C1-like family 4 436 1.2E-199 T 09-03-2017 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 LS838_RS01340 f35dfb439f98efa016b53c66a6695362 437 PIRSF PIRSF005700 1 437 6.2E-171 T 09-03-2017 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 LS838_RS01340 f35dfb439f98efa016b53c66a6695362 437 Gene3D G3DSA:3.90.70.10 51 436 3.1E-152 T 09-03-2017 LS838_RS01340 f35dfb439f98efa016b53c66a6695362 437 SUPERFAMILY SSF54001 1 436 3.02E-125 T 09-03-2017 LS838_RS04970 b3d8eeadde536495d649de39db7a5504 331 Gene3D G3DSA:3.40.50.1820 27 331 1.9E-69 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS04970 b3d8eeadde536495d649de39db7a5504 331 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 35 271 8.7E-9 T 09-03-2017 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 LS838_RS04970 b3d8eeadde536495d649de39db7a5504 331 SUPERFAMILY SSF53474 254 331 2.37E-43 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS04970 b3d8eeadde536495d649de39db7a5504 331 SUPERFAMILY SSF53474 4 221 2.37E-43 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS04180 c515597c2fe1c725655d06a690a2e2f6 900 SUPERFAMILY SSF53720 32 471 1.54E-64 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LS838_RS04180 c515597c2fe1c725655d06a690a2e2f6 900 Gene3D G3DSA:3.40.50.1970 473 678 2.6E-54 T 09-03-2017 LS838_RS04180 c515597c2fe1c725655d06a690a2e2f6 900 Gene3D G3DSA:3.40.309.10 254 422 2.9E-9 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LS838_RS04180 c515597c2fe1c725655d06a690a2e2f6 900 SUPERFAMILY SSF56796 471 898 1.15E-100 T 09-03-2017 LS838_RS04180 c515597c2fe1c725655d06a690a2e2f6 900 Gene3D G3DSA:1.20.1090.10 679 900 2.2E-59 T 09-03-2017 LS838_RS04180 c515597c2fe1c725655d06a690a2e2f6 900 Gene3D G3DSA:3.40.605.10 24 253 1.6E-29 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LS838_RS04180 c515597c2fe1c725655d06a690a2e2f6 900 Pfam PF00171 Aldehyde dehydrogenase family 31 290 4.9E-15 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LS838_RS04180 c515597c2fe1c725655d06a690a2e2f6 900 PIRSF PIRSF000111 13 900 0.0 T 09-03-2017 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 LS838_RS04180 c515597c2fe1c725655d06a690a2e2f6 900 Pfam PF00465 Iron-containing alcohol dehydrogenase 478 892 1.0E-105 T 09-03-2017 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 LS838_RS04050 d71ed796a80e066a235def8f7aec1285 314 SUPERFAMILY SSF53335 62 296 1.63E-42 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS04050 d71ed796a80e066a235def8f7aec1285 314 Gene3D G3DSA:3.40.50.150 115 305 6.6E-43 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS04050 d71ed796a80e066a235def8f7aec1285 314 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 44 311 4.3E-71 T 09-03-2017 LS838_RS04050 d71ed796a80e066a235def8f7aec1285 314 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 311 30.094 T 09-03-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 LS838_RS04050 d71ed796a80e066a235def8f7aec1285 314 PIRSF PIRSF000401 1 313 6.5E-77 T 09-03-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 LS838_RS04050 d71ed796a80e066a235def8f7aec1285 314 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 59 304 4.0E-58 T 09-03-2017 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 LS838_RS05700 69a98eddc8b9cad523b306b5c0923628 279 SUPERFAMILY SSF102405 77 269 1.08E-30 T 09-03-2017 LS838_RS05700 69a98eddc8b9cad523b306b5c0923628 279 Pfam PF02481 DNA recombination-mediator protein A 70 272 7.7E-74 T 09-03-2017 IPR003488 DNA recombination-mediator protein A GO:0009294 LS838_RS05700 69a98eddc8b9cad523b306b5c0923628 279 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 69 274 9.0E-67 T 09-03-2017 IPR003488 DNA recombination-mediator protein A GO:0009294 LS838_RS05700 69a98eddc8b9cad523b306b5c0923628 279 Gene3D G3DSA:3.40.50.450 107 252 2.3E-7 T 09-03-2017 LS838_RS05685 b414845674c1914fc83a33f37a2f387e 295 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 87 5.4E-21 T 09-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 LS838_RS05685 b414845674c1914fc83a33f37a2f387e 295 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 2 295 53.416 T 09-03-2017 IPR023009 Tyrosine recombinase XerC/XerD LS838_RS05685 b414845674c1914fc83a33f37a2f387e 295 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 5 295 1.2E-102 T 09-03-2017 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 LS838_RS05685 b414845674c1914fc83a33f37a2f387e 295 Gene3D G3DSA:1.10.150.130 5 96 7.7E-22 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal LS838_RS05685 b414845674c1914fc83a33f37a2f387e 295 Gene3D G3DSA:1.10.443.10 110 287 1.3E-55 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LS838_RS05685 b414845674c1914fc83a33f37a2f387e 295 SUPERFAMILY SSF47823 4 96 5.3E-14 T 09-03-2017 IPR010998 Integrase, Lambda-type, N-terminal LS838_RS05685 b414845674c1914fc83a33f37a2f387e 295 Pfam PF00589 Phage integrase family 109 281 1.5E-49 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LS838_RS05685 b414845674c1914fc83a33f37a2f387e 295 SUPERFAMILY SSF56349 103 291 3.53E-54 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LS838_RS04735 099431f9a4444d66556fe3830adddf51 541 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 464 9.3E-67 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain LS838_RS04735 099431f9a4444d66556fe3830adddf51 541 SUPERFAMILY SSF53850 35 534 1.54E-104 T 09-03-2017 LS838_RS04735 099431f9a4444d66556fe3830adddf51 541 Gene3D G3DSA:3.10.105.10 289 510 2.5E-39 T 09-03-2017 LS838_RS04735 099431f9a4444d66556fe3830adddf51 541 PIRSF PIRSF002741 1 541 8.8E-85 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LS838_RS04735 099431f9a4444d66556fe3830adddf51 541 Gene3D G3DSA:3.90.76.10 44 217 2.7E-43 T 09-03-2017 LS838_RS01555 4c873bb23267d314ae29f5687ba41765 160 Gene3D G3DSA:3.40.140.10 8 149 4.4E-37 T 09-03-2017 LS838_RS01555 4c873bb23267d314ae29f5687ba41765 160 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 117 2.0E-24 T 09-03-2017 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 LS838_RS01555 4c873bb23267d314ae29f5687ba41765 160 PIRSF PIRSF006019 1 152 2.7E-49 T 09-03-2017 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-500753 LS838_RS01555 4c873bb23267d314ae29f5687ba41765 160 SUPERFAMILY SSF53927 10 154 9.41E-37 T 09-03-2017 IPR016193 Cytidine deaminase-like GO:0003824 LS838_RS01600 fb0c5cf2325eaa57117b5eb1cd4c3ec4 461 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 451 40.174 T 09-03-2017 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 LS838_RS01600 fb0c5cf2325eaa57117b5eb1cd4c3ec4 461 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 393 428 2.8E-4 T 09-03-2017 IPR001451 Hexapeptide repeat LS838_RS01600 fb0c5cf2325eaa57117b5eb1cd4c3ec4 461 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 266 298 3.0E-5 T 09-03-2017 IPR001451 Hexapeptide repeat LS838_RS01600 fb0c5cf2325eaa57117b5eb1cd4c3ec4 461 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 5 450 1.0E-169 T 09-03-2017 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 LS838_RS01600 fb0c5cf2325eaa57117b5eb1cd4c3ec4 461 Pfam PF12804 MobA-like NTP transferase domain 5 138 7.1E-21 T 09-03-2017 IPR025877 MobA-like NTP transferase LS838_RS01600 fb0c5cf2325eaa57117b5eb1cd4c3ec4 461 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 402 430 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 LS838_RS01600 fb0c5cf2325eaa57117b5eb1cd4c3ec4 461 Gene3D G3DSA:2.160.10.10 255 436 2.4E-44 T 09-03-2017 LS838_RS01600 fb0c5cf2325eaa57117b5eb1cd4c3ec4 461 Gene3D G3DSA:3.90.550.10 4 250 1.1E-77 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS01600 fb0c5cf2325eaa57117b5eb1cd4c3ec4 461 SUPERFAMILY SSF51161 248 446 5.33E-44 T 09-03-2017 IPR011004 Trimeric LpxA-like LS838_RS01600 fb0c5cf2325eaa57117b5eb1cd4c3ec4 461 SUPERFAMILY SSF53448 4 252 6.07E-63 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS08935 8b55517fbb83b8aecca208aa05edb015 259 SUPERFAMILY SSF54001 132 252 3.01E-24 T 09-03-2017 LS838_RS08935 8b55517fbb83b8aecca208aa05edb015 259 Pfam PF00877 NlpC/P60 family 154 255 1.0E-13 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain LS838_RS08935 8b55517fbb83b8aecca208aa05edb015 259 Gene3D G3DSA:3.90.1720.10 135 256 1.2E-27 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 Gene3D G3DSA:3.30.230.10 484 598 1.5E-47 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 Pfam PF03144 Elongation factor Tu domain 2 324 391 2.1E-12 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 Gene3D G3DSA:3.40.50.300 9 288 1.4E-105 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 PRINTS PR00315 GTP-binding elongation factor signature 60 68 5.0E-17 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 PRINTS PR00315 GTP-binding elongation factor signature 132 141 5.0E-17 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 PRINTS PR00315 GTP-binding elongation factor signature 14 27 5.0E-17 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 PRINTS PR00315 GTP-binding elongation factor signature 96 107 5.0E-17 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 PRINTS PR00315 GTP-binding elongation factor signature 80 90 5.0E-17 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 Pfam PF00009 Elongation factor Tu GTP binding domain 11 283 1.2E-70 T 09-03-2017 LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 SUPERFAMILY SSF50447 266 402 1.59E-32 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 Gene3D G3DSA:2.40.30.10 305 404 3.1E-34 T 09-03-2017 LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 Pfam PF03764 Elongation factor G, domain IV 479 596 4.9E-46 T 09-03-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 SUPERFAMILY SSF54211 479 597 7.59E-41 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 SMART SM00889 480 597 3.6E-71 T 09-03-2017 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 SMART SM00838 599 686 6.8E-54 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 Gene3D G3DSA:3.30.70.870 405 480 9.9E-36 T 09-03-2017 LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 SUPERFAMILY SSF54980 404 481 2.27E-24 T 09-03-2017 IPR009022 Elongation factor G, III-V domain LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 Gene3D G3DSA:3.30.70.240 599 684 1.1E-33 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 Pfam PF00679 Elongation factor G C-terminus 599 685 3.2E-30 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 SUPERFAMILY SSF52540 8 283 2.53E-107 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 TIGRFAM TIGR00484 EF-G: translation elongation factor G 5 690 0.0 T 09-03-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 Hamap MF_00054_B Elongation factor G [fusA]. 8 690 106.383 T 09-03-2017 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 SUPERFAMILY SSF54980 599 689 1.29E-29 T 09-03-2017 IPR009022 Elongation factor G, III-V domain LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 Pfam PF14492 Elongation Factor G, domain II 404 477 1.7E-33 T 09-03-2017 IPR009022 Elongation factor G, III-V domain LS838_RS01825 9c437d66d7114d7e8edbfab954bad8d3 694 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 180 1.3E-40 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LS838_RS01390 4aab3e6868204b1f6f2b76097662010d 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 83 99 3.0E-7 T 09-03-2017 LS838_RS01390 4aab3e6868204b1f6f2b76097662010d 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 12 26 3.0E-7 T 09-03-2017 LS838_RS01390 4aab3e6868204b1f6f2b76097662010d 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 53 67 3.0E-7 T 09-03-2017 LS838_RS01390 4aab3e6868204b1f6f2b76097662010d 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 9 517 54.345 T 09-03-2017 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 LS838_RS01390 4aab3e6868204b1f6f2b76097662010d 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 172 185 1.9E-5 T 09-03-2017 LS838_RS01390 4aab3e6868204b1f6f2b76097662010d 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 56 65 1.9E-5 T 09-03-2017 LS838_RS01390 4aab3e6868204b1f6f2b76097662010d 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 83 94 1.9E-5 T 09-03-2017 LS838_RS01390 4aab3e6868204b1f6f2b76097662010d 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.7E-42 T 09-03-2017 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 LS838_RS01390 4aab3e6868204b1f6f2b76097662010d 517 Gene3D G3DSA:3.30.300.10 393 517 1.8E-51 T 09-03-2017 LS838_RS01390 4aab3e6868204b1f6f2b76097662010d 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 12 199 1.1E-77 T 09-03-2017 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 LS838_RS01390 4aab3e6868204b1f6f2b76097662010d 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 207 517 7.7E-154 T 09-03-2017 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 LS838_RS01390 4aab3e6868204b1f6f2b76097662010d 517 Pfam PF00117 Glutamine amidotransferase class-I 14 194 4.9E-41 T 09-03-2017 IPR017926 Glutamine amidotransferase LS838_RS01390 4aab3e6868204b1f6f2b76097662010d 517 Gene3D G3DSA:3.40.50.880 9 217 8.3E-63 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS01390 4aab3e6868204b1f6f2b76097662010d 517 SUPERFAMILY SSF52402 188 439 2.3E-57 T 09-03-2017 LS838_RS01390 4aab3e6868204b1f6f2b76097662010d 517 Gene3D G3DSA:3.40.50.620 218 392 5.9E-59 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS01390 4aab3e6868204b1f6f2b76097662010d 517 Pfam PF02540 NAD synthase 214 394 1.8E-10 T 09-03-2017 IPR022310 NAD/GMP synthase LS838_RS01390 4aab3e6868204b1f6f2b76097662010d 517 SUPERFAMILY SSF52317 10 232 1.64E-55 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS07705 77d601e96c517e4a6acacc0677d0db40 153 Pfam PF07977 FabA-like domain 13 135 5.5E-31 T 09-03-2017 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LS838_RS07705 77d601e96c517e4a6acacc0677d0db40 153 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 4 143 32.116 T 09-03-2017 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LS838_RS07705 77d601e96c517e4a6acacc0677d0db40 153 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 4 140 5.1E-52 T 09-03-2017 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 LS838_RS07705 77d601e96c517e4a6acacc0677d0db40 153 SUPERFAMILY SSF54637 7 144 2.33E-42 T 09-03-2017 IPR029069 HotDog domain LS838_RS07705 77d601e96c517e4a6acacc0677d0db40 153 Gene3D G3DSA:3.10.129.10 2 142 3.8E-50 T 09-03-2017 IPR029069 HotDog domain LS838_RS04580 1c961df4ffc96c50e9929ebdcf88d9c1 150 Pfam PF01252 Signal peptidase (SPase) II 8 145 5.6E-33 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 LS838_RS04580 1c961df4ffc96c50e9929ebdcf88d9c1 150 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 47 55 3.6E-16 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 LS838_RS04580 1c961df4ffc96c50e9929ebdcf88d9c1 150 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 125 141 3.6E-16 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 LS838_RS04580 1c961df4ffc96c50e9929ebdcf88d9c1 150 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 91 106 3.6E-16 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 LS838_RS04580 1c961df4ffc96c50e9929ebdcf88d9c1 150 TIGRFAM TIGR00077 lspA: signal peptidase II 7 148 3.1E-32 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 LS838_RS04580 1c961df4ffc96c50e9929ebdcf88d9c1 150 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 150 15.524 T 09-03-2017 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 LS838_RS03480 dad9ecb06fe14e03c3b8c052331fca53 559 Gene3D G3DSA:3.60.15.10 4 257 2.2E-70 T 09-03-2017 IPR001279 Metallo-beta-lactamase LS838_RS03480 dad9ecb06fe14e03c3b8c052331fca53 559 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 8 555 9.8E-196 T 09-03-2017 IPR004613 Ribonuclease J GO:0003723|GO:0046872 LS838_RS03480 dad9ecb06fe14e03c3b8c052331fca53 559 Hamap MF_01491 Ribonuclease J [rnj]. 3 558 43.862 T 09-03-2017 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 LS838_RS03480 dad9ecb06fe14e03c3b8c052331fca53 559 PIRSF PIRSF004803 1 558 9.3E-219 T 09-03-2017 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 LS838_RS03480 dad9ecb06fe14e03c3b8c052331fca53 559 SUPERFAMILY SSF56281 10 424 9.04E-90 T 09-03-2017 IPR001279 Metallo-beta-lactamase LS838_RS03480 dad9ecb06fe14e03c3b8c052331fca53 559 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 358 411 7.9E-12 T 09-03-2017 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain LS838_RS03480 dad9ecb06fe14e03c3b8c052331fca53 559 Pfam PF12706 Beta-lactamase superfamily domain 61 166 6.4E-12 T 09-03-2017 IPR001279 Metallo-beta-lactamase LS838_RS03480 dad9ecb06fe14e03c3b8c052331fca53 559 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 366 394 - T 09-03-2017 IPR001587 Ribonuclease J, conserved site LS838_RS03480 dad9ecb06fe14e03c3b8c052331fca53 559 SMART SM00849 20 217 1.1E-19 T 09-03-2017 IPR001279 Metallo-beta-lactamase LS838_RS04945 358cd529f53e287cf3101392288f0f9d 399 Pfam PF00005 ABC transporter 345 393 8.4E-13 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS04945 358cd529f53e287cf3101392288f0f9d 399 Pfam PF00664 ABC transporter transmembrane region 19 288 8.4E-32 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS04945 358cd529f53e287cf3101392288f0f9d 399 Gene3D G3DSA:1.20.1560.10 9 314 6.9E-50 T 09-03-2017 LS838_RS04945 358cd529f53e287cf3101392288f0f9d 399 Gene3D G3DSA:3.40.50.300 330 390 7.3E-19 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04945 358cd529f53e287cf3101392288f0f9d 399 SUPERFAMILY SSF52540 278 391 1.01E-20 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04945 358cd529f53e287cf3101392288f0f9d 399 SUPERFAMILY SSF90123 8 313 7.46E-50 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS06170 c7b70b1877b04989a7a5a2cd3664eda6 61 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 55 8.7E-20 T 09-03-2017 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS06170 c7b70b1877b04989a7a5a2cd3664eda6 61 Gene3D G3DSA:4.10.1160.10 18 60 5.7E-22 T 09-03-2017 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS06170 c7b70b1877b04989a7a5a2cd3664eda6 61 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 61 16.33 T 09-03-2017 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS06170 c7b70b1877b04989a7a5a2cd3664eda6 61 SUPERFAMILY SSF143800 3 59 2.55E-21 T 09-03-2017 LS838_RS06170 c7b70b1877b04989a7a5a2cd3664eda6 61 Pfam PF00830 Ribosomal L28 family 6 57 5.8E-19 T 09-03-2017 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01385 858128ec1451cb3ce019b2da955db180 385 SUPERFAMILY SSF51412 4 379 3.14E-138 T 09-03-2017 LS838_RS01385 858128ec1451cb3ce019b2da955db180 385 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 12 369 2.7E-151 T 09-03-2017 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 LS838_RS01385 858128ec1451cb3ce019b2da955db180 385 Gene3D G3DSA:3.20.20.70 7 380 1.1E-138 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LS838_RS01385 858128ec1451cb3ce019b2da955db180 385 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 187 199 - T 09-03-2017 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 LS838_RS01385 858128ec1451cb3ce019b2da955db180 385 SMART SM01240 11 369 5.4E-234 T 09-03-2017 LS838_RS06320 88ccedae2d94b72527cddb6f09e45dea 383 SUPERFAMILY SSF53383 15 379 1.88E-105 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase LS838_RS06320 88ccedae2d94b72527cddb6f09e45dea 383 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 LS838_RS06320 88ccedae2d94b72527cddb6f09e45dea 383 PIRSF PIRSF001434 1 382 5.6E-132 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 LS838_RS06320 88ccedae2d94b72527cddb6f09e45dea 383 Gene3D G3DSA:3.40.640.10 3 244 5.4E-91 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LS838_RS06320 88ccedae2d94b72527cddb6f09e45dea 383 Gene3D G3DSA:3.90.1150.10 246 381 1.8E-40 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LS838_RS06320 88ccedae2d94b72527cddb6f09e45dea 383 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 378 4.1E-133 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 LS838_RS03730 d921041bf368e77af548ef946a9b04c3 264 SUPERFAMILY SSF51735 3 250 7.26E-67 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS03730 d921041bf368e77af548ef946a9b04c3 264 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LS838_RS03730 d921041bf368e77af548ef946a9b04c3 264 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 193 0.0046 T 09-03-2017 LS838_RS03730 d921041bf368e77af548ef946a9b04c3 264 PIRSF PIRSF000126 1 264 4.3E-53 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS03730 d921041bf368e77af548ef946a9b04c3 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 7.0E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS03730 d921041bf368e77af548ef946a9b04c3 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 7.0E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS03730 d921041bf368e77af548ef946a9b04c3 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.0E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS03730 d921041bf368e77af548ef946a9b04c3 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 7.0E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS03730 d921041bf368e77af548ef946a9b04c3 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 7.0E-24 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS03730 d921041bf368e77af548ef946a9b04c3 264 Pfam PF00106 short chain dehydrogenase 8 195 1.8E-53 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS03730 d921041bf368e77af548ef946a9b04c3 264 Gene3D G3DSA:3.40.50.720 7 230 3.5E-67 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS03730 d921041bf368e77af548ef946a9b04c3 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 4.6E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS03730 d921041bf368e77af548ef946a9b04c3 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.6E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS03730 d921041bf368e77af548ef946a9b04c3 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 4.6E-9 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS03420 0a3f7e184817f801bfa379b6e3327200 931 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 522 535 3.8E-29 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 LS838_RS03420 0a3f7e184817f801bfa379b6e3327200 931 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 3.8E-29 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 LS838_RS03420 0a3f7e184817f801bfa379b6e3327200 931 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 229 252 3.8E-29 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 LS838_RS03420 0a3f7e184817f801bfa379b6e3327200 931 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 394 409 3.8E-29 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 LS838_RS03420 0a3f7e184817f801bfa379b6e3327200 931 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 556 565 3.8E-29 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 LS838_RS03420 0a3f7e184817f801bfa379b6e3327200 931 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 635 1.6E-204 T 09-03-2017 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS03420 0a3f7e184817f801bfa379b6e3327200 931 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS03420 0a3f7e184817f801bfa379b6e3327200 931 SUPERFAMILY SSF47323 647 918 4.86E-71 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS03420 0a3f7e184817f801bfa379b6e3327200 931 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 918 19.718 T 09-03-2017 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 LS838_RS03420 0a3f7e184817f801bfa379b6e3327200 931 Gene3D G3DSA:1.10.730.10 636 819 8.8E-41 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS03420 0a3f7e184817f801bfa379b6e3327200 931 SUPERFAMILY SSF52374 1 200 2.1E-146 T 09-03-2017 LS838_RS03420 0a3f7e184817f801bfa379b6e3327200 931 SUPERFAMILY SSF52374 396 643 2.1E-146 T 09-03-2017 LS838_RS03420 0a3f7e184817f801bfa379b6e3327200 931 Pfam PF06827 Zinc finger found in FPG and IleRS 887 915 1.7E-8 T 09-03-2017 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 LS838_RS03420 0a3f7e184817f801bfa379b6e3327200 931 Pfam PF08264 Anticodon-binding domain of tRNA 680 833 2.4E-28 T 09-03-2017 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 LS838_RS03420 0a3f7e184817f801bfa379b6e3327200 931 SUPERFAMILY SSF50677 201 395 1.47E-48 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 LS838_RS03420 0a3f7e184817f801bfa379b6e3327200 931 Gene3D G3DSA:3.40.50.620 12 198 2.6E-138 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS03420 0a3f7e184817f801bfa379b6e3327200 931 Gene3D G3DSA:3.40.50.620 399 631 2.6E-138 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS03420 0a3f7e184817f801bfa379b6e3327200 931 Gene3D G3DSA:3.90.740.10 204 382 6.8E-52 T 09-03-2017 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 LS838_RS03420 0a3f7e184817f801bfa379b6e3327200 931 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 13 835 2.7E-281 T 09-03-2017 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 LS838_RS00790 fd6f0e68bf1df1c838da5281fd6c5da9 59 SMART SM00530 4 58 2.0E-9 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LS838_RS00790 fd6f0e68bf1df1c838da5281fd6c5da9 59 Gene3D G3DSA:1.10.260.40 2 58 1.6E-12 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS00790 fd6f0e68bf1df1c838da5281fd6c5da9 59 Pfam PF01381 Helix-turn-helix 5 55 2.0E-11 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LS838_RS00790 fd6f0e68bf1df1c838da5281fd6c5da9 59 SUPERFAMILY SSF47413 1 58 6.19E-13 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS06715 e9bb03e61c5f4011e479ca09757f3d0c 274 SUPERFAMILY SSF81624 2 141 3.4E-37 T 09-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LS838_RS06715 e9bb03e61c5f4011e479ca09757f3d0c 274 Gene3D G3DSA:3.20.190.10 2 130 7.3E-35 T 09-03-2017 LS838_RS06715 e9bb03e61c5f4011e479ca09757f3d0c 274 SMART SM00898 2 116 1.1E-43 T 09-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LS838_RS06715 e9bb03e61c5f4011e479ca09757f3d0c 274 Gene3D G3DSA:1.10.8.50 132 272 8.4E-47 T 09-03-2017 LS838_RS06715 e9bb03e61c5f4011e479ca09757f3d0c 274 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 132 221 4.2E-27 T 09-03-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 LS838_RS06715 e9bb03e61c5f4011e479ca09757f3d0c 274 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 271 2.2E-96 T 09-03-2017 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 LS838_RS06715 e9bb03e61c5f4011e479ca09757f3d0c 274 Pfam PF06827 Zinc finger found in FPG and IleRS 244 273 1.9E-9 T 09-03-2017 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 LS838_RS06715 e9bb03e61c5f4011e479ca09757f3d0c 274 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 272 40.494 T 09-03-2017 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 LS838_RS06715 e9bb03e61c5f4011e479ca09757f3d0c 274 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 2.2E-33 T 09-03-2017 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 LS838_RS06715 e9bb03e61c5f4011e479ca09757f3d0c 274 SMART SM01232 132 224 1.5E-40 T 09-03-2017 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 LS838_RS06715 e9bb03e61c5f4011e479ca09757f3d0c 274 SUPERFAMILY SSF46946 132 221 1.83E-27 T 09-03-2017 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 LS838_RS06715 e9bb03e61c5f4011e479ca09757f3d0c 274 SUPERFAMILY SSF57716 221 272 1.6E-15 T 09-03-2017 LS838_RS00970 37f8627613b3f21f6ea02a9d6be851cf 319 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 09-03-2017 LS838_RS00970 37f8627613b3f21f6ea02a9d6be851cf 319 Gene3D G3DSA:1.10.260.40 6 54 1.2E-20 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS00970 37f8627613b3f21f6ea02a9d6be851cf 319 SUPERFAMILY SSF53822 74 306 8.78E-44 T 09-03-2017 IPR028082 Periplasmic binding protein-like I LS838_RS00970 37f8627613b3f21f6ea02a9d6be851cf 319 Gene3D G3DSA:3.40.50.2300 55 162 5.2E-17 T 09-03-2017 LS838_RS00970 37f8627613b3f21f6ea02a9d6be851cf 319 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 4.0E-17 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LS838_RS00970 37f8627613b3f21f6ea02a9d6be851cf 319 SUPERFAMILY SSF47413 4 62 9.38E-15 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS00970 37f8627613b3f21f6ea02a9d6be851cf 319 SMART SM00354 4 74 5.5E-24 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LS838_RS00970 37f8627613b3f21f6ea02a9d6be851cf 319 Gene3D G3DSA:3.40.50.2300 163 298 9.3E-30 T 09-03-2017 LS838_RS00970 37f8627613b3f21f6ea02a9d6be851cf 319 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 4.9E-5 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LS838_RS00970 37f8627613b3f21f6ea02a9d6be851cf 319 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 4.9E-5 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LS838_RS00970 37f8627613b3f21f6ea02a9d6be851cf 319 Pfam PF13377 Periplasmic binding protein-like domain 162 318 2.8E-25 T 09-03-2017 LS838_RS06850 40db4161a082dffa9e1315213a4453fa 695 Gene3D G3DSA:3.40.710.10 258 657 1.1E-104 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS06850 40db4161a082dffa9e1315213a4453fa 695 SUPERFAMILY SSF53955 69 275 1.21E-68 T 09-03-2017 IPR023346 Lysozyme-like domain LS838_RS06850 40db4161a082dffa9e1315213a4453fa 695 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 90 633 1.5E-177 T 09-03-2017 LS838_RS06850 40db4161a082dffa9e1315213a4453fa 695 Pfam PF00905 Penicillin binding protein transpeptidase domain 350 613 3.0E-36 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LS838_RS06850 40db4161a082dffa9e1315213a4453fa 695 Gene3D G3DSA:1.10.3810.10 81 257 8.3E-68 T 09-03-2017 LS838_RS06850 40db4161a082dffa9e1315213a4453fa 695 SUPERFAMILY SSF56601 288 642 4.1E-103 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS06850 40db4161a082dffa9e1315213a4453fa 695 SUPERFAMILY SSF56601 236 258 4.1E-103 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS06850 40db4161a082dffa9e1315213a4453fa 695 Pfam PF00912 Transglycosylase 85 254 2.8E-61 T 09-03-2017 IPR001264 Glycosyl transferase, family 51 LS838_RS01630 7a3086622463462bc3ac0adb02c0bf9c 539 Hamap MF_01227 CTP synthase [pyrG]. 2 535 48.322 T 09-03-2017 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 LS838_RS01630 7a3086622463462bc3ac0adb02c0bf9c 539 Pfam PF00117 Glutamine amidotransferase class-I 304 529 9.3E-54 T 09-03-2017 IPR017926 Glutamine amidotransferase LS838_RS01630 7a3086622463462bc3ac0adb02c0bf9c 539 SUPERFAMILY SSF52540 1 271 7.97E-119 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01630 7a3086622463462bc3ac0adb02c0bf9c 539 Pfam PF06418 CTP synthase N-terminus 3 266 3.0E-121 T 09-03-2017 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 LS838_RS01630 7a3086622463462bc3ac0adb02c0bf9c 539 Gene3D G3DSA:3.40.50.300 1 287 1.0E-129 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01630 7a3086622463462bc3ac0adb02c0bf9c 539 SUPERFAMILY SSF52317 291 532 1.02E-71 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS01630 7a3086622463462bc3ac0adb02c0bf9c 539 Gene3D G3DSA:3.40.50.880 292 533 9.2E-94 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS01630 7a3086622463462bc3ac0adb02c0bf9c 539 TIGRFAM TIGR00337 PyrG: CTP synthase 1 530 4.1E-234 T 09-03-2017 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 LS838_RS02755 e156c398aced72fdb2278ccb16b054ff 547 Pfam PF00013 KH domain 241 298 8.8E-8 T 09-03-2017 IPR004088 K Homology domain, type 1 GO:0003723 LS838_RS02755 e156c398aced72fdb2278ccb16b054ff 547 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 59 547 2.9E-208 T 09-03-2017 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 LS838_RS02755 e156c398aced72fdb2278ccb16b054ff 547 TIGRFAM TIGR00277 HDIG: HDIG domain 359 436 3.3E-24 T 09-03-2017 IPR006675 HDIG domain LS838_RS02755 e156c398aced72fdb2278ccb16b054ff 547 SMART SM00322 235 302 9.7E-10 T 09-03-2017 IPR004087 K Homology domain GO:0003676 LS838_RS02755 e156c398aced72fdb2278ccb16b054ff 547 Pfam PF01966 HD domain 364 447 5.0E-18 T 09-03-2017 IPR006674 HD domain LS838_RS02755 e156c398aced72fdb2278ccb16b054ff 547 SUPERFAMILY SSF109604 351 497 8.08E-28 T 09-03-2017 LS838_RS02755 e156c398aced72fdb2278ccb16b054ff 547 Gene3D G3DSA:3.30.1370.10 247 324 3.5E-9 T 09-03-2017 IPR004088 K Homology domain, type 1 GO:0003723 LS838_RS02755 e156c398aced72fdb2278ccb16b054ff 547 Hamap MF_00335 Ribonuclease Y [rny]. 11 547 24.435 T 09-03-2017 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 LS838_RS02755 e156c398aced72fdb2278ccb16b054ff 547 SUPERFAMILY SSF54791 235 330 1.82E-16 T 09-03-2017 IPR004088 K Homology domain, type 1 GO:0003723 LS838_RS02755 e156c398aced72fdb2278ccb16b054ff 547 Pfam PF12072 Domain of unknown function (DUF3552) 13 232 2.0E-52 T 09-03-2017 IPR022711 Ribonuclease Y, N-terminal LS838_RS02755 e156c398aced72fdb2278ccb16b054ff 547 Gene3D G3DSA:1.10.3210.10 342 522 2.0E-44 T 09-03-2017 IPR006674 HD domain LS838_RS02755 e156c398aced72fdb2278ccb16b054ff 547 SMART SM00471 359 465 4.6E-11 T 09-03-2017 IPR003607 HD/PDEase domain LS838_RS05670 0ed16d8f7b7f9341a8331fa70b48b8f4 298 SUPERFAMILY SSF74650 3 292 3.58E-54 T 09-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LS838_RS05670 0ed16d8f7b7f9341a8331fa70b48b8f4 298 Gene3D G3DSA:2.70.98.10 4 290 1.1E-24 T 09-03-2017 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 LS838_RS05670 0ed16d8f7b7f9341a8331fa70b48b8f4 298 Pfam PF01263 Aldose 1-epimerase 3 255 3.1E-25 T 09-03-2017 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 LS838_RS02270 5d6931eefd372ffcab3cce9e3db607b7 188 Gene3D G3DSA:2.160.10.10 2 183 6.6E-40 T 09-03-2017 LS838_RS02270 5d6931eefd372ffcab3cce9e3db607b7 188 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 163 4.3E-9 T 09-03-2017 IPR001451 Hexapeptide repeat LS838_RS02270 5d6931eefd372ffcab3cce9e3db607b7 188 SUPERFAMILY SSF51161 2 182 8.59E-37 T 09-03-2017 IPR011004 Trimeric LpxA-like LS838_RS02270 5d6931eefd372ffcab3cce9e3db607b7 188 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 LS838_RS04335 6677d362baea0cab7f741a44f421a310 212 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 3 209 2.7E-52 T 09-03-2017 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 LS838_RS04335 6677d362baea0cab7f741a44f421a310 212 SUPERFAMILY SSF109755 2 210 3.03E-54 T 09-03-2017 LS838_RS04335 6677d362baea0cab7f741a44f421a310 212 Gene3D G3DSA:1.20.58.220 1 105 2.8E-27 T 09-03-2017 LS838_RS04335 6677d362baea0cab7f741a44f421a310 212 Pfam PF01895 PhoU domain 17 103 5.4E-15 T 09-03-2017 IPR026022 PhoU domain LS838_RS04335 6677d362baea0cab7f741a44f421a310 212 Pfam PF01895 PhoU domain 118 201 3.5E-21 T 09-03-2017 IPR026022 PhoU domain LS838_RS04335 6677d362baea0cab7f741a44f421a310 212 PIRSF PIRSF003107 1 212 7.6E-56 T 09-03-2017 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 LS838_RS04335 6677d362baea0cab7f741a44f421a310 212 Gene3D G3DSA:1.20.58.220 117 209 1.3E-24 T 09-03-2017 LS838_RS05925 b8e1d09adf06d3f6d37db93119daffc8 1445 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1445 383.467 T 09-03-2017 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS05925 b8e1d09adf06d3f6d37db93119daffc8 1445 Pfam PF11490 DNA polymerase III polC-type N-terminus II 92 196 5.4E-8 T 09-03-2017 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS05925 b8e1d09adf06d3f6d37db93119daffc8 1445 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 234 1445 0.0 T 09-03-2017 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS05925 b8e1d09adf06d3f6d37db93119daffc8 1445 Gene3D G3DSA:3.30.420.10 422 593 7.3E-59 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS05925 b8e1d09adf06d3f6d37db93119daffc8 1445 Pfam PF02811 PHP domain 341 700 1.0E-41 T 09-03-2017 IPR004013 PHP domain GO:0003824 LS838_RS05925 b8e1d09adf06d3f6d37db93119daffc8 1445 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 831 1240 1.2E-86 T 09-03-2017 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS05925 b8e1d09adf06d3f6d37db93119daffc8 1445 SMART SM00481 340 407 1.4E-23 T 09-03-2017 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 LS838_RS05925 b8e1d09adf06d3f6d37db93119daffc8 1445 Pfam PF14480 DNA polymerase III polC-type N-terminus I 7 76 4.7E-12 T 09-03-2017 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS05925 b8e1d09adf06d3f6d37db93119daffc8 1445 Pfam PF00929 Exonuclease 427 581 4.4E-34 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LS838_RS05925 b8e1d09adf06d3f6d37db93119daffc8 1445 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 422 625 3.6E-39 T 09-03-2017 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS05925 b8e1d09adf06d3f6d37db93119daffc8 1445 SMART SM00479 425 591 1.2E-38 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LS838_RS05925 b8e1d09adf06d3f6d37db93119daffc8 1445 SUPERFAMILY SSF53098 425 882 4.17E-95 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS05925 b8e1d09adf06d3f6d37db93119daffc8 1445 Gene3D G3DSA:3.20.20.140 635 799 3.0E-56 T 09-03-2017 LS838_RS05925 b8e1d09adf06d3f6d37db93119daffc8 1445 Gene3D G3DSA:3.20.20.140 338 421 3.0E-56 T 09-03-2017 LS838_RS05925 b8e1d09adf06d3f6d37db93119daffc8 1445 Gene3D G3DSA:1.10.150.280 1377 1433 3.5E-9 T 09-03-2017 LS838_RS05925 b8e1d09adf06d3f6d37db93119daffc8 1445 Pfam PF14579 Helix-hairpin-helix motif 1356 1424 6.1E-9 T 09-03-2017 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS07895 4ee65d3c457701f07aaf86f7caf8a0a9 199 Gene3D G3DSA:1.10.1660.10 2 50 9.8E-13 T 09-03-2017 LS838_RS07895 4ee65d3c457701f07aaf86f7caf8a0a9 199 SUPERFAMILY SSF46955 4 51 1.14E-11 T 09-03-2017 IPR009061 Putative DNA-binding domain LS838_RS07895 4ee65d3c457701f07aaf86f7caf8a0a9 199 Gene3D G3DSA:3.40.50.1390 65 184 3.9E-19 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS07895 4ee65d3c457701f07aaf86f7caf8a0a9 199 SMART SM00857 65 191 8.5E-21 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS07895 4ee65d3c457701f07aaf86f7caf8a0a9 199 SUPERFAMILY SSF53041 65 196 1.44E-22 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS07895 4ee65d3c457701f07aaf86f7caf8a0a9 199 SMART SM00422 5 67 7.8E-9 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS07895 4ee65d3c457701f07aaf86f7caf8a0a9 199 Pfam PF00376 MerR family regulatory protein 6 42 2.9E-12 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS07895 4ee65d3c457701f07aaf86f7caf8a0a9 199 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS07895 4ee65d3c457701f07aaf86f7caf8a0a9 199 ProSitePatterns PS00397 Site-specific recombinases active site. 68 76 - T 09-03-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 LS838_RS07895 4ee65d3c457701f07aaf86f7caf8a0a9 199 Pfam PF00239 Resolvase, N terminal domain 66 194 5.5E-21 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS07150 ea9eb8c6054148a2365738dcecb358de 856 Gene3D G3DSA:1.10.1420.10 253 459 7.8E-55 T 09-03-2017 LS838_RS07150 ea9eb8c6054148a2365738dcecb358de 856 Gene3D G3DSA:3.30.420.110 126 249 1.3E-23 T 09-03-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 LS838_RS07150 ea9eb8c6054148a2365738dcecb358de 856 SUPERFAMILY SSF55271 4 114 3.14E-42 T 09-03-2017 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 LS838_RS07150 ea9eb8c6054148a2365738dcecb358de 856 SMART SM00533 274 583 3.8E-103 T 09-03-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LS838_RS07150 ea9eb8c6054148a2365738dcecb358de 856 Pfam PF00488 MutS domain V 604 790 7.2E-83 T 09-03-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LS838_RS07150 ea9eb8c6054148a2365738dcecb358de 856 Pfam PF05190 MutS family domain IV 419 510 9.5E-29 T 09-03-2017 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 LS838_RS07150 ea9eb8c6054148a2365738dcecb358de 856 Gene3D G3DSA:3.40.1170.10 4 116 4.3E-48 T 09-03-2017 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 LS838_RS07150 ea9eb8c6054148a2365738dcecb358de 856 SUPERFAMILY SSF48334 261 557 8.37E-88 T 09-03-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LS838_RS07150 ea9eb8c6054148a2365738dcecb358de 856 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 850 0.0 T 09-03-2017 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 LS838_RS07150 ea9eb8c6054148a2365738dcecb358de 856 Pfam PF05192 MutS domain III 261 551 2.5E-43 T 09-03-2017 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 LS838_RS07150 ea9eb8c6054148a2365738dcecb358de 856 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 681 697 - T 09-03-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LS838_RS07150 ea9eb8c6054148a2365738dcecb358de 856 SUPERFAMILY SSF52540 559 790 6.1E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07150 ea9eb8c6054148a2365738dcecb358de 856 SMART SM00534 600 787 8.4E-120 T 09-03-2017 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 LS838_RS07150 ea9eb8c6054148a2365738dcecb358de 856 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 6 845 24.415 T 09-03-2017 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 LS838_RS07150 ea9eb8c6054148a2365738dcecb358de 856 Pfam PF01624 MutS domain I 7 116 8.9E-43 T 09-03-2017 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 LS838_RS07150 ea9eb8c6054148a2365738dcecb358de 856 Pfam PF05188 MutS domain II 127 243 2.1E-12 T 09-03-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 LS838_RS07150 ea9eb8c6054148a2365738dcecb358de 856 SUPERFAMILY SSF53150 122 269 3.53E-26 T 09-03-2017 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 LS838_RS07150 ea9eb8c6054148a2365738dcecb358de 856 Gene3D G3DSA:3.40.50.300 559 790 9.6E-86 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06905 50a32c900bfdd1e3ac483429409d351c 428 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 129 146 2.0E-11 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LS838_RS06905 50a32c900bfdd1e3ac483429409d351c 428 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 2.0E-11 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LS838_RS06905 50a32c900bfdd1e3ac483429409d351c 428 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 156 169 2.0E-11 T 09-03-2017 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 LS838_RS06905 50a32c900bfdd1e3ac483429409d351c 428 Gene3D G3DSA:3.40.710.10 32 316 4.2E-84 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS06905 50a32c900bfdd1e3ac483429409d351c 428 Gene3D G3DSA:2.60.410.10 322 410 7.3E-9 T 09-03-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LS838_RS06905 50a32c900bfdd1e3ac483429409d351c 428 SUPERFAMILY SSF56601 8 317 1.15E-67 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS06905 50a32c900bfdd1e3ac483429409d351c 428 SUPERFAMILY SSF69189 309 393 3.53E-8 T 09-03-2017 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LS838_RS06905 50a32c900bfdd1e3ac483429409d351c 428 SMART SM00936 317 413 9.5E-10 T 09-03-2017 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 LS838_RS06905 50a32c900bfdd1e3ac483429409d351c 428 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 37 293 7.0E-71 T 09-03-2017 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 LS838_RS02080 aa6247c15b9546df029815daf24569a2 379 SUPERFAMILY SSF53756 22 373 3.77E-7 T 09-03-2017 LS838_RS02080 aa6247c15b9546df029815daf24569a2 379 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 70 375 1.6E-50 T 09-03-2017 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 LS838_RS04505 4288dadff16676aee035ad8c4ddb3cbc 215 Pfam PF07261 Replication initiation and membrane attachment 140 210 2.9E-22 T 09-03-2017 IPR006343 Replication protein, DnaD/DnaB domain LS838_RS04505 4288dadff16676aee035ad8c4ddb3cbc 215 SUPERFAMILY SSF158499 140 203 7.32E-18 T 09-03-2017 IPR006343 Replication protein, DnaD/DnaB domain LS838_RS04505 4288dadff16676aee035ad8c4ddb3cbc 215 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 139 208 1.0E-20 T 09-03-2017 IPR006343 Replication protein, DnaD/DnaB domain LS838_RS04505 4288dadff16676aee035ad8c4ddb3cbc 215 Gene3D G3DSA:1.10.10.630 134 208 6.4E-25 T 09-03-2017 IPR006343 Replication protein, DnaD/DnaB domain LS838_RS03460 44b3c166c3e7d185dca2ab4302cbf1b7 219 SMART SM00855 2 163 5.1E-20 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LS838_RS03460 44b3c166c3e7d185dca2ab4302cbf1b7 219 Gene3D G3DSA:3.40.50.1240 1 212 4.3E-55 T 09-03-2017 IPR029033 Histidine phosphatase superfamily LS838_RS03460 44b3c166c3e7d185dca2ab4302cbf1b7 219 SUPERFAMILY SSF53254 1 211 9.29E-51 T 09-03-2017 IPR029033 Histidine phosphatase superfamily LS838_RS03460 44b3c166c3e7d185dca2ab4302cbf1b7 219 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 202 4.3E-54 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LS838_RS02530 2a898aa83c86d319013de5a3e98be4a5 484 PIRSF PIRSF006060 2 482 8.0E-36 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LS838_RS02530 2a898aa83c86d319013de5a3e98be4a5 484 Pfam PF13520 Amino acid permease 34 460 4.4E-30 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LS838_RS04380 03f45713693796e179e5e98c0369c643 255 Gene3D G3DSA:3.40.50.300 2 229 4.5E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04380 03f45713693796e179e5e98c0369c643 255 SMART SM00382 27 232 2.4E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS04380 03f45713693796e179e5e98c0369c643 255 SUPERFAMILY SSF52540 1 225 8.39E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04380 03f45713693796e179e5e98c0369c643 255 Pfam PF00005 ABC transporter 24 162 3.2E-19 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS09070 0d1e1761ab92506d810b4f1bf3349b6d 304 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LS838_RS09070 0d1e1761ab92506d810b4f1bf3349b6d 304 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 300 5.3E-105 T 09-03-2017 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 LS838_RS09070 0d1e1761ab92506d810b4f1bf3349b6d 304 Pfam PF00294 pfkB family carbohydrate kinase 20 280 5.7E-50 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB LS838_RS09070 0d1e1761ab92506d810b4f1bf3349b6d 304 Gene3D G3DSA:3.40.1190.20 32 301 3.6E-81 T 09-03-2017 IPR029056 Ribokinase-like LS838_RS09070 0d1e1761ab92506d810b4f1bf3349b6d 304 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 300 1.5E-106 T 09-03-2017 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 LS838_RS09070 0d1e1761ab92506d810b4f1bf3349b6d 304 PIRSF PIRSF000535 1 303 3.3E-85 T 09-03-2017 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 LS838_RS09070 0d1e1761ab92506d810b4f1bf3349b6d 304 SUPERFAMILY SSF53613 1 300 8.57E-66 T 09-03-2017 IPR029056 Ribokinase-like LS838_RS09070 0d1e1761ab92506d810b4f1bf3349b6d 304 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 09-03-2017 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 LS838_RS08305 ca3d7eb42952dd8889c0527f52d006f8 435 SUPERFAMILY SSF55681 117 423 7.67E-99 T 09-03-2017 LS838_RS08305 ca3d7eb42952dd8889c0527f52d006f8 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 4.7E-31 T 09-03-2017 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LS838_RS08305 ca3d7eb42952dd8889c0527f52d006f8 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 422 4.4E-164 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LS838_RS08305 ca3d7eb42952dd8889c0527f52d006f8 435 PIRSF PIRSF001529 1 431 2.7E-173 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LS838_RS08305 ca3d7eb42952dd8889c0527f52d006f8 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 427 40.181 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LS838_RS08305 ca3d7eb42952dd8889c0527f52d006f8 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 229 405 4.7E-37 T 09-03-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS08305 ca3d7eb42952dd8889c0527f52d006f8 435 Gene3D G3DSA:1.10.287.40 1 105 7.7E-28 T 09-03-2017 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LS838_RS08305 ca3d7eb42952dd8889c0527f52d006f8 435 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 3.4E-32 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LS838_RS08305 ca3d7eb42952dd8889c0527f52d006f8 435 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 3.4E-32 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LS838_RS08305 ca3d7eb42952dd8889c0527f52d006f8 435 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 3.4E-32 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LS838_RS08305 ca3d7eb42952dd8889c0527f52d006f8 435 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 3.4E-32 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LS838_RS08305 ca3d7eb42952dd8889c0527f52d006f8 435 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 3.4E-32 T 09-03-2017 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 LS838_RS08305 ca3d7eb42952dd8889c0527f52d006f8 435 SUPERFAMILY SSF46589 1 112 1.57E-29 T 09-03-2017 IPR010978 tRNA-binding arm GO:0000166 LS838_RS08305 ca3d7eb42952dd8889c0527f52d006f8 435 Gene3D G3DSA:3.30.930.10 106 425 1.8E-136 T 09-03-2017 LS838_RS04065 cceebb58500fcb6ea3fb8f5d98de238f 428 SUPERFAMILY SSF55681 4 323 1.08E-96 T 09-03-2017 LS838_RS04065 cceebb58500fcb6ea3fb8f5d98de238f 428 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 428 32.629 T 09-03-2017 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 LS838_RS04065 cceebb58500fcb6ea3fb8f5d98de238f 428 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 412 9.0E-149 T 09-03-2017 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 LS838_RS04065 cceebb58500fcb6ea3fb8f5d98de238f 428 Gene3D G3DSA:3.40.50.800 330 418 1.1E-25 T 09-03-2017 IPR004154 Anticodon-binding LS838_RS04065 cceebb58500fcb6ea3fb8f5d98de238f 428 Pfam PF03129 Anticodon binding domain 335 419 7.6E-15 T 09-03-2017 IPR004154 Anticodon-binding LS838_RS04065 cceebb58500fcb6ea3fb8f5d98de238f 428 Gene3D G3DSA:3.30.930.10 1 185 5.4E-94 T 09-03-2017 LS838_RS04065 cceebb58500fcb6ea3fb8f5d98de238f 428 Gene3D G3DSA:3.30.930.10 221 323 5.4E-94 T 09-03-2017 LS838_RS04065 cceebb58500fcb6ea3fb8f5d98de238f 428 SUPERFAMILY SSF52954 331 418 1.03E-21 T 09-03-2017 IPR004154 Anticodon-binding LS838_RS04065 cceebb58500fcb6ea3fb8f5d98de238f 428 Pfam PF13393 Histidyl-tRNA synthetase 8 310 2.6E-43 T 09-03-2017 LS838_RS04065 cceebb58500fcb6ea3fb8f5d98de238f 428 PIRSF PIRSF001549 1 422 1.2E-121 T 09-03-2017 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 LS838_RS00965 c4b86e0c9417e5782e159dc60b862588 540 Pfam PF00128 Alpha amylase, catalytic domain 34 362 1.2E-121 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LS838_RS00965 c4b86e0c9417e5782e159dc60b862588 540 Gene3D G3DSA:2.60.40.1180 469 538 6.5E-12 T 09-03-2017 IPR013780 Glycosyl hydrolase, all-beta LS838_RS00965 c4b86e0c9417e5782e159dc60b862588 540 Gene3D G3DSA:3.20.20.80 176 466 1.2E-127 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS00965 c4b86e0c9417e5782e159dc60b862588 540 Gene3D G3DSA:3.20.20.80 8 109 1.2E-127 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS00965 c4b86e0c9417e5782e159dc60b862588 540 SUPERFAMILY SSF51445 10 464 3.42E-153 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS00965 c4b86e0c9417e5782e159dc60b862588 540 Pfam PF11941 Domain of unknown function (DUF3459) 450 535 1.1E-8 T 09-03-2017 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) LS838_RS00965 c4b86e0c9417e5782e159dc60b862588 540 Gene3D G3DSA:3.90.400.10 110 172 5.7E-27 T 09-03-2017 LS838_RS00965 c4b86e0c9417e5782e159dc60b862588 540 SMART SM00642 19 406 2.9E-156 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LS838_RS00965 c4b86e0c9417e5782e159dc60b862588 540 SUPERFAMILY SSF51011 467 536 7.2E-10 T 09-03-2017 LS838_RS03965 52b2dab461bc2116fc6c1d0ce30ad079 207 Gene3D G3DSA:3.30.70.1210 91 205 8.6E-26 T 09-03-2017 LS838_RS03965 52b2dab461bc2116fc6c1d0ce30ad079 207 TIGRFAM TIGR01907 casE_Cse3: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI 1 205 3.4E-21 T 09-03-2017 IPR010179 CRISPR-associated protein Cse3 LS838_RS03965 52b2dab461bc2116fc6c1d0ce30ad079 207 SUPERFAMILY SSF117987 1 84 1.31E-19 T 09-03-2017 LS838_RS03965 52b2dab461bc2116fc6c1d0ce30ad079 207 SUPERFAMILY SSF117987 91 205 3.92E-27 T 09-03-2017 LS838_RS03965 52b2dab461bc2116fc6c1d0ce30ad079 207 Pfam PF08798 CRISPR associated protein 1 205 7.9E-52 T 09-03-2017 IPR010179 CRISPR-associated protein Cse3 LS838_RS03965 52b2dab461bc2116fc6c1d0ce30ad079 207 SMART SM01101 1 205 3.1E-73 T 09-03-2017 IPR010179 CRISPR-associated protein Cse3 LS838_RS03965 52b2dab461bc2116fc6c1d0ce30ad079 207 Gene3D G3DSA:3.30.70.1200 1 76 9.7E-14 T 09-03-2017 LS838_RS02105 b07c1d8bc0599662465dde5d9c10989b 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 20 275 1.5E-71 T 09-03-2017 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 LS838_RS02105 b07c1d8bc0599662465dde5d9c10989b 276 SUPERFAMILY SSF52402 4 271 6.7E-84 T 09-03-2017 LS838_RS02105 b07c1d8bc0599662465dde5d9c10989b 276 Gene3D G3DSA:3.40.50.620 5 269 2.3E-68 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS02105 b07c1d8bc0599662465dde5d9c10989b 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 18 269 30.635 T 09-03-2017 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 LS838_RS02105 b07c1d8bc0599662465dde5d9c10989b 276 Pfam PF02540 NAD synthase 24 266 3.9E-68 T 09-03-2017 IPR022310 NAD/GMP synthase LS838_RS09625 f5c1e1ead06ce111cfb8070dfbdd3038 147 Pfam PF01797 Transposase IS200 like 20 141 6.7E-39 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LS838_RS09625 f5c1e1ead06ce111cfb8070dfbdd3038 147 Gene3D G3DSA:3.30.70.1290 11 143 1.2E-44 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LS838_RS09625 f5c1e1ead06ce111cfb8070dfbdd3038 147 SMART SM01321 20 141 6.4E-42 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LS838_RS09625 f5c1e1ead06ce111cfb8070dfbdd3038 147 SUPERFAMILY SSF143422 12 141 4.05E-40 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LS838_RS01190 509cfc8ab34ffed8770271bccbdd97c0 401 Pfam PF03217 Bacterial surface layer protein 286 400 5.4E-37 T 09-03-2017 IPR024968 SLAP domain, Lactobacillus LS838_RS01190 509cfc8ab34ffed8770271bccbdd97c0 401 SMART SM00047 26 195 1.8E-36 T 09-03-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 LS838_RS01190 509cfc8ab34ffed8770271bccbdd97c0 401 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 50 191 4.0E-23 T 09-03-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 LS838_RS01190 509cfc8ab34ffed8770271bccbdd97c0 401 PRINTS PR01002 Flagellar protein FlgJ signature 152 171 1.3E-13 T 09-03-2017 LS838_RS01190 509cfc8ab34ffed8770271bccbdd97c0 401 PRINTS PR01002 Flagellar protein FlgJ signature 37 60 1.3E-13 T 09-03-2017 LS838_RS01190 509cfc8ab34ffed8770271bccbdd97c0 401 PRINTS PR01002 Flagellar protein FlgJ signature 172 190 1.3E-13 T 09-03-2017 LS838_RS01190 509cfc8ab34ffed8770271bccbdd97c0 401 PRINTS PR01002 Flagellar protein FlgJ signature 61 79 1.3E-13 T 09-03-2017 LS838_RS09935 7f880de1c571af799a7a31c0cf1f4841 461 Pfam PF12631 MnmE helical domain 131 458 1.0E-55 T 09-03-2017 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 LS838_RS09935 7f880de1c571af799a7a31c0cf1f4841 461 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 9 461 33.512 T 09-03-2017 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 LS838_RS09935 7f880de1c571af799a7a31c0cf1f4841 461 Gene3D G3DSA:3.40.50.300 294 395 3.3E-14 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09935 7f880de1c571af799a7a31c0cf1f4841 461 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 16 461 1.9E-134 T 09-03-2017 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 LS838_RS09935 7f880de1c571af799a7a31c0cf1f4841 461 Gene3D G3DSA:3.40.50.300 205 254 6.0E-6 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09935 7f880de1c571af799a7a31c0cf1f4841 461 Gene3D G3DSA:3.30.1360.120 4 129 5.4E-47 T 09-03-2017 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 LS838_RS09935 7f880de1c571af799a7a31c0cf1f4841 461 SUPERFAMILY SSF52540 84 178 2.02E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09935 7f880de1c571af799a7a31c0cf1f4841 461 SUPERFAMILY SSF52540 212 377 2.02E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09935 7f880de1c571af799a7a31c0cf1f4841 461 Gene3D G3DSA:1.20.120.430 130 190 2.2E-51 T 09-03-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 LS838_RS09935 7f880de1c571af799a7a31c0cf1f4841 461 Gene3D G3DSA:1.20.120.430 255 279 2.2E-51 T 09-03-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 LS838_RS09935 7f880de1c571af799a7a31c0cf1f4841 461 Gene3D G3DSA:1.20.120.430 396 461 2.2E-51 T 09-03-2017 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 LS838_RS09935 7f880de1c571af799a7a31c0cf1f4841 461 Pfam PF01926 50S ribosome-binding GTPase 227 339 5.2E-27 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS09935 7f880de1c571af799a7a31c0cf1f4841 461 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 226 374 7.2E-27 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LS838_RS09935 7f880de1c571af799a7a31c0cf1f4841 461 Pfam PF10396 GTP-binding protein TrmE N-terminus 10 128 3.7E-41 T 09-03-2017 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 LS838_RS00595 5d474e121752fdd2fb843ea11b6ac144 594 SMART SM00900 12 86 1.5E-8 T 09-03-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 LS838_RS00595 5d474e121752fdd2fb843ea11b6ac144 594 SUPERFAMILY SSF51905 91 353 3.92E-37 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS00595 5d474e121752fdd2fb843ea11b6ac144 594 SUPERFAMILY SSF51905 508 572 3.92E-37 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS00595 5d474e121752fdd2fb843ea11b6ac144 594 Gene3D G3DSA:3.90.700.10 360 497 2.8E-27 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS00595 5d474e121752fdd2fb843ea11b6ac144 594 Pfam PF04205 FMN-binding domain 12 83 2.9E-9 T 09-03-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 LS838_RS00595 5d474e121752fdd2fb843ea11b6ac144 594 SUPERFAMILY SSF56425 359 508 1.86E-24 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS00595 5d474e121752fdd2fb843ea11b6ac144 594 Pfam PF00890 FAD binding domain 107 540 1.3E-39 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS00595 5d474e121752fdd2fb843ea11b6ac144 594 Gene3D G3DSA:3.50.50.60 92 336 2.0E-51 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS00595 5d474e121752fdd2fb843ea11b6ac144 594 Gene3D G3DSA:3.50.50.60 505 567 2.0E-51 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS03860 2ff0e1fbd38585b194cfe44d199e81d8 435 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 352 430 2.0E-33 T 09-03-2017 IPR032859 GTPase Der, C-terminal KH-domain-like LS838_RS03860 2ff0e1fbd38585b194cfe44d199e81d8 435 Hamap MF_00195 GTPase Der [der]. 3 435 40.264 T 09-03-2017 IPR016484 GTP-binding protein EngA GO:0005525 LS838_RS03860 2ff0e1fbd38585b194cfe44d199e81d8 435 SUPERFAMILY SSF52540 4 173 1.89E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03860 2ff0e1fbd38585b194cfe44d199e81d8 435 Gene3D G3DSA:3.30.300.20 355 435 4.6E-37 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta LS838_RS03860 2ff0e1fbd38585b194cfe44d199e81d8 435 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 159 3.2E-25 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LS838_RS03860 2ff0e1fbd38585b194cfe44d199e81d8 435 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 179 343 1.6E-31 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LS838_RS03860 2ff0e1fbd38585b194cfe44d199e81d8 435 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 429 3.3E-176 T 09-03-2017 IPR016484 GTP-binding protein EngA GO:0005525 LS838_RS03860 2ff0e1fbd38585b194cfe44d199e81d8 435 PIRSF PIRSF006485 2 435 1.3E-171 T 09-03-2017 IPR016484 GTP-binding protein EngA GO:0005525 LS838_RS03860 2ff0e1fbd38585b194cfe44d199e81d8 435 SUPERFAMILY SSF52540 138 434 7.83E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03860 2ff0e1fbd38585b194cfe44d199e81d8 435 Pfam PF01926 50S ribosome-binding GTPase 178 294 5.4E-24 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS03860 2ff0e1fbd38585b194cfe44d199e81d8 435 Pfam PF01926 50S ribosome-binding GTPase 6 120 1.7E-28 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS03860 2ff0e1fbd38585b194cfe44d199e81d8 435 Gene3D G3DSA:3.40.50.300 173 354 2.9E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03860 2ff0e1fbd38585b194cfe44d199e81d8 435 Gene3D G3DSA:3.40.50.300 4 172 1.5E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08880 26c7581cb17d10f26e13259926ab72f3 302 SUPERFAMILY SSF53448 237 275 1.29E-21 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS08880 26c7581cb17d10f26e13259926ab72f3 302 SUPERFAMILY SSF53448 5 205 1.29E-21 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS08880 26c7581cb17d10f26e13259926ab72f3 302 Gene3D G3DSA:3.90.550.10 9 191 1.1E-13 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS08880 26c7581cb17d10f26e13259926ab72f3 302 Pfam PF00535 Glycosyl transferase family 2 9 129 5.7E-9 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 LS838_RS00525 3b7e8af79e0dedc6d1dc55dc4088adf3 531 SUPERFAMILY SSF47203 217 366 8.22E-35 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LS838_RS00525 3b7e8af79e0dedc6d1dc55dc4088adf3 531 Gene3D G3DSA:2.40.110.10 114 207 1.3E-24 T 09-03-2017 LS838_RS00525 3b7e8af79e0dedc6d1dc55dc4088adf3 531 SUPERFAMILY SSF52467 410 530 1.64E-25 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain LS838_RS00525 3b7e8af79e0dedc6d1dc55dc4088adf3 531 Gene3D G3DSA:1.20.140.10 208 366 6.6E-40 T 09-03-2017 LS838_RS00525 3b7e8af79e0dedc6d1dc55dc4088adf3 531 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 413 492 7.9E-18 T 09-03-2017 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 LS838_RS00525 3b7e8af79e0dedc6d1dc55dc4088adf3 531 SUPERFAMILY SSF56645 5 223 9.95E-46 T 09-03-2017 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 LS838_RS00525 3b7e8af79e0dedc6d1dc55dc4088adf3 531 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 105 3.4E-16 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LS838_RS00525 3b7e8af79e0dedc6d1dc55dc4088adf3 531 Gene3D G3DSA:1.10.540.10 4 105 5.8E-21 T 09-03-2017 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 LS838_RS00525 3b7e8af79e0dedc6d1dc55dc4088adf3 531 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 115 204 1.3E-18 T 09-03-2017 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 LS838_RS00525 3b7e8af79e0dedc6d1dc55dc4088adf3 531 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 217 362 1.6E-26 T 09-03-2017 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 LS838_RS00525 3b7e8af79e0dedc6d1dc55dc4088adf3 531 Gene3D G3DSA:3.40.50.1220 407 530 1.0E-28 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain LS838_RS06350 80c8bc61bb261c86b072c6e16983f334 421 SUPERFAMILY SSF56059 107 318 3.7E-57 T 09-03-2017 LS838_RS06350 80c8bc61bb261c86b072c6e16983f334 421 SMART SM01210 326 417 4.8E-25 T 09-03-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LS838_RS06350 80c8bc61bb261c86b072c6e16983f334 421 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 09-03-2017 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LS838_RS06350 80c8bc61bb261c86b072c6e16983f334 421 Gene3D G3DSA:3.90.600.10 326 416 4.1E-21 T 09-03-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LS838_RS06350 80c8bc61bb261c86b072c6e16983f334 421 Gene3D G3DSA:3.40.50.20 6 98 1.7E-31 T 09-03-2017 IPR016185 Pre-ATP-grasp domain LS838_RS06350 80c8bc61bb261c86b072c6e16983f334 421 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 5 417 37.182 T 09-03-2017 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LS838_RS06350 80c8bc61bb261c86b072c6e16983f334 421 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 5 416 5.3E-133 T 09-03-2017 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LS838_RS06350 80c8bc61bb261c86b072c6e16983f334 421 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 328 415 3.3E-17 T 09-03-2017 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LS838_RS06350 80c8bc61bb261c86b072c6e16983f334 421 SUPERFAMILY SSF52440 5 106 2.73E-30 T 09-03-2017 IPR016185 Pre-ATP-grasp domain LS838_RS06350 80c8bc61bb261c86b072c6e16983f334 421 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 106 293 2.6E-64 T 09-03-2017 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LS838_RS06350 80c8bc61bb261c86b072c6e16983f334 421 Gene3D G3DSA:3.30.1490.20 124 188 1.8E-20 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LS838_RS06350 80c8bc61bb261c86b072c6e16983f334 421 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 6 105 3.4E-29 T 09-03-2017 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 LS838_RS06350 80c8bc61bb261c86b072c6e16983f334 421 Gene3D G3DSA:3.30.470.20 189 315 5.6E-53 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LS838_RS06350 80c8bc61bb261c86b072c6e16983f334 421 SMART SM01209 106 293 1.3E-106 T 09-03-2017 LS838_RS06350 80c8bc61bb261c86b072c6e16983f334 421 SUPERFAMILY SSF51246 325 416 6.59E-20 T 09-03-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LS838_RS00350 e1307baa6547052cd2d94a2f90c7572b 480 Gene3D G3DSA:3.90.400.10 88 167 1.1E-29 T 09-03-2017 LS838_RS00350 e1307baa6547052cd2d94a2f90c7572b 480 Gene3D G3DSA:3.20.20.80 173 424 5.3E-96 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS00350 e1307baa6547052cd2d94a2f90c7572b 480 Gene3D G3DSA:3.20.20.80 4 87 5.3E-96 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS00350 e1307baa6547052cd2d94a2f90c7572b 480 SUPERFAMILY SSF51445 4 425 1.25E-75 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS00350 e1307baa6547052cd2d94a2f90c7572b 480 SMART SM00642 6 423 7.1E-4 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LS838_RS00350 e1307baa6547052cd2d94a2f90c7572b 480 Pfam PF00128 Alpha amylase, catalytic domain 36 246 1.2E-11 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LS838_RS00350 e1307baa6547052cd2d94a2f90c7572b 480 PIRSF PIRSF003059 1 480 6.5E-181 T 09-03-2017 IPR016377 Sucrose phosphorylase GO:0005985|GO:0009018 KEGG: 00500+2.4.1.7|MetaCyc: PWY-5384 LS838_RS00350 e1307baa6547052cd2d94a2f90c7572b 480 TIGRFAM TIGR03852 sucrose_gtfA: sucrose phosphorylase 5 473 1.0E-255 T 09-03-2017 IPR022527 Sucrose phosphorylase, GftA GO:0005985|GO:0009018 LS838_RS02800 f9013fceb383d815661d77c9819f57a6 319 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 7 304 6.7E-109 T 09-03-2017 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 LS838_RS02800 f9013fceb383d815661d77c9819f57a6 319 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 1 309 39.969 T 09-03-2017 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 LS838_RS02800 f9013fceb383d815661d77c9819f57a6 319 Gene3D G3DSA:3.40.50.300 136 309 1.5E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02800 f9013fceb383d815661d77c9819f57a6 319 Gene3D G3DSA:3.40.1390.20 11 134 2.4E-40 T 09-03-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like LS838_RS02800 f9013fceb383d815661d77c9819f57a6 319 SUPERFAMILY SSF53795 135 301 3.97E-42 T 09-03-2017 LS838_RS02800 f9013fceb383d815661d77c9819f57a6 319 SUPERFAMILY SSF75138 11 131 4.71E-35 T 09-03-2017 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like LS838_RS02800 f9013fceb383d815661d77c9819f57a6 319 Pfam PF02603 HPr Serine kinase N terminus 5 130 6.4E-37 T 09-03-2017 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 LS838_RS02800 f9013fceb383d815661d77c9819f57a6 319 Pfam PF07475 HPr Serine kinase C-terminal domain 133 301 3.8E-73 T 09-03-2017 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 LS838_RS05560 49bcd187dbfb45158ec7dfe6991b9ac4 378 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 338 364 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05560 49bcd187dbfb45158ec7dfe6991b9ac4 378 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 166 179 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05560 49bcd187dbfb45158ec7dfe6991b9ac4 378 Pfam PF04539 Sigma-70 region 3 221 299 5.0E-19 T 09-03-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05560 49bcd187dbfb45158ec7dfe6991b9ac4 378 SUPERFAMILY SSF88946 102 211 3.61E-50 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05560 49bcd187dbfb45158ec7dfe6991b9ac4 378 SUPERFAMILY SSF88659 215 291 6.1E-17 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05560 49bcd187dbfb45158ec7dfe6991b9ac4 378 SUPERFAMILY SSF88659 275 368 7.2E-26 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05560 49bcd187dbfb45158ec7dfe6991b9ac4 378 Gene3D G3DSA:1.10.10.10 315 375 4.4E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS05560 49bcd187dbfb45158ec7dfe6991b9ac4 378 Pfam PF04545 Sigma-70, region 4 317 366 2.4E-18 T 09-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05560 49bcd187dbfb45158ec7dfe6991b9ac4 378 PRINTS PR00046 Major sigma-70 factor signature 317 329 1.1E-30 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05560 49bcd187dbfb45158ec7dfe6991b9ac4 378 PRINTS PR00046 Major sigma-70 factor signature 166 179 1.1E-30 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05560 49bcd187dbfb45158ec7dfe6991b9ac4 378 PRINTS PR00046 Major sigma-70 factor signature 190 198 1.1E-30 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05560 49bcd187dbfb45158ec7dfe6991b9ac4 378 PRINTS PR00046 Major sigma-70 factor signature 338 353 1.1E-30 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05560 49bcd187dbfb45158ec7dfe6991b9ac4 378 PRINTS PR00046 Major sigma-70 factor signature 353 364 1.1E-30 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05560 49bcd187dbfb45158ec7dfe6991b9ac4 378 Gene3D G3DSA:1.10.10.10 215 265 2.7E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS05560 49bcd187dbfb45158ec7dfe6991b9ac4 378 Pfam PF04542 Sigma-70 region 2 141 211 1.5E-19 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05560 49bcd187dbfb45158ec7dfe6991b9ac4 378 Pfam PF00140 Sigma-70 factor, region 1.2 102 134 4.1E-18 T 09-03-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05560 49bcd187dbfb45158ec7dfe6991b9ac4 378 Gene3D G3DSA:1.10.601.10 26 211 1.4E-67 T 09-03-2017 LS838_RS05560 49bcd187dbfb45158ec7dfe6991b9ac4 378 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 136 366 2.7E-34 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS04115 da570ec638c051912422b28ee69f3781 156 Gene3D G3DSA:2.40.50.100 77 154 1.7E-28 T 09-03-2017 LS838_RS04115 da570ec638c051912422b28ee69f3781 156 Pfam PF00364 Biotin-requiring enzyme 80 153 3.6E-21 T 09-03-2017 IPR000089 Biotin/lipoyl attachment LS838_RS04115 da570ec638c051912422b28ee69f3781 156 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 9.9E-40 T 09-03-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 LS838_RS04115 da570ec638c051912422b28ee69f3781 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 4.9E-14 T 09-03-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 LS838_RS04115 da570ec638c051912422b28ee69f3781 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 4.9E-14 T 09-03-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 LS838_RS04115 da570ec638c051912422b28ee69f3781 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 4.9E-14 T 09-03-2017 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 LS838_RS04115 da570ec638c051912422b28ee69f3781 156 SUPERFAMILY SSF51230 79 154 5.2E-23 T 09-03-2017 IPR011053 Single hybrid motif LS838_RS04115 da570ec638c051912422b28ee69f3781 156 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 110 127 - T 09-03-2017 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LS838_RS01760 0bb2c7dab6aa9ee8b3464942e2b3aa4e 202 Pfam PF16475 Domain of unknown function (DUF5052) 4 199 2.6E-75 T 09-03-2017 IPR032484 Protein of unknown function DUF5052 LS838_RS09570 5c98e5305e3c9efb8fb6a41f6d64453e 80 SUPERFAMILY SSF47336 2 76 3.01E-15 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain LS838_RS09570 5c98e5305e3c9efb8fb6a41f6d64453e 80 Pfam PF00550 Phosphopantetheine attachment site 6 72 5.2E-11 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain LS838_RS09570 5c98e5305e3c9efb8fb6a41f6d64453e 80 TIGRFAM TIGR01688 dltC: D-alanine--poly(phosphoribitol) ligase, subunit 2 5 74 1.3E-27 T 09-03-2017 IPR003230 D-alanine--poly(phosphoribitol) ligase subunit 2 GO:0019350|GO:0036370 KEGG: 00473+6.1.1.13 LS838_RS09570 5c98e5305e3c9efb8fb6a41f6d64453e 80 Hamap MF_00565 D-alanine--poly(phosphoribitol) ligase subunit 2 [dltC]. 1 77 47.158 T 09-03-2017 IPR003230 D-alanine--poly(phosphoribitol) ligase subunit 2 GO:0019350|GO:0036370 KEGG: 00473+6.1.1.13 LS838_RS09570 5c98e5305e3c9efb8fb6a41f6d64453e 80 Gene3D G3DSA:1.10.1200.10 1 77 1.3E-23 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain LS838_RS08255 e5f5c7bd74f685a2da353769e1133906 289 Gene3D G3DSA:3.40.50.2300 11 113 1.7E-12 T 09-03-2017 LS838_RS08255 e5f5c7bd74f685a2da353769e1133906 289 SUPERFAMILY SSF52172 12 118 1.85E-11 T 09-03-2017 IPR011006 CheY-like superfamily LS838_RS08255 e5f5c7bd74f685a2da353769e1133906 289 Pfam PF00072 Response regulator receiver domain 10 111 1.9E-10 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LS838_RS08255 e5f5c7bd74f685a2da353769e1133906 289 SMART SM00448 1 114 0.0057 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LS838_RS08255 e5f5c7bd74f685a2da353769e1133906 289 Pfam PF08664 YcbB domain 156 273 6.0E-20 T 09-03-2017 IPR013972 YcbB domain LS838_RS05370 4db30299fdb44c472f56f4a71a959bb7 338 Gene3D G3DSA:3.30.930.10 13 332 1.4E-146 T 09-03-2017 LS838_RS05370 4db30299fdb44c472f56f4a71a959bb7 338 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 12 334 50.831 T 09-03-2017 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 LS838_RS05370 4db30299fdb44c472f56f4a71a959bb7 338 PIRSF PIRSF001555 8 338 1.2E-158 T 09-03-2017 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 LS838_RS05370 4db30299fdb44c472f56f4a71a959bb7 338 Pfam PF03590 Aspartate-ammonia ligase 20 248 7.1E-96 T 09-03-2017 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 LS838_RS05370 4db30299fdb44c472f56f4a71a959bb7 338 SUPERFAMILY SSF55681 16 331 4.97E-93 T 09-03-2017 LS838_RS05370 4db30299fdb44c472f56f4a71a959bb7 338 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 20 330 3.1E-109 T 09-03-2017 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 SMART SM00271 5 62 5.5E-29 T 09-03-2017 IPR001623 DnaJ domain LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 Pfam PF01556 DnaJ C terminal domain 125 341 1.2E-39 T 09-03-2017 IPR002939 Chaperone DnaJ, C-terminal LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 SUPERFAMILY SSF49493 118 159 1.44E-17 T 09-03-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 SUPERFAMILY SSF49493 222 263 1.44E-17 T 09-03-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 PRINTS PR00625 DnaJ domain signature 8 26 2.2E-30 T 09-03-2017 IPR001623 DnaJ domain LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 PRINTS PR00625 DnaJ domain signature 26 41 2.2E-30 T 09-03-2017 IPR001623 DnaJ domain LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 PRINTS PR00625 DnaJ domain signature 42 62 2.2E-30 T 09-03-2017 IPR001623 DnaJ domain LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 PRINTS PR00625 DnaJ domain signature 62 81 2.2E-30 T 09-03-2017 IPR001623 DnaJ domain LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 SUPERFAMILY SSF46565 2 106 6.67E-36 T 09-03-2017 IPR001623 DnaJ domain LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 SUPERFAMILY SSF49493 267 352 6.93E-20 T 09-03-2017 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 SUPERFAMILY SSF57938 138 218 2.88E-19 T 09-03-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 Gene3D G3DSA:2.10.230.10 145 218 6.3E-20 T 09-03-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 Pfam PF00684 DnaJ central domain 151 215 1.1E-13 T 09-03-2017 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 Gene3D G3DSA:1.10.287.110 1 109 4.4E-39 T 09-03-2017 IPR001623 DnaJ domain LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 Gene3D G3DSA:2.60.260.20 266 342 5.4E-18 T 09-03-2017 LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 6 358 3.7E-136 T 09-03-2017 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 Gene3D G3DSA:2.60.260.20 110 144 5.4E-21 T 09-03-2017 LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 Gene3D G3DSA:2.60.260.20 219 262 5.4E-21 T 09-03-2017 LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 Pfam PF00226 DnaJ domain 6 67 2.0E-26 T 09-03-2017 IPR001623 DnaJ domain LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 09-03-2017 IPR018253 DnaJ domain, conserved site LS838_RS05865 16ae27123bb0c92fe8eb28b7341fa9d0 379 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 3 377 39.05 T 09-03-2017 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 LS838_RS05520 7ef4ab436c27d8de3613a974ab903183 631 SUPERFAMILY SSF69304 70 325 4.58E-7 T 09-03-2017 LS838_RS05520 7ef4ab436c27d8de3613a974ab903183 631 Gene3D G3DSA:3.40.50.1820 151 192 1.1E-66 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS05520 7ef4ab436c27d8de3613a974ab903183 631 Gene3D G3DSA:3.40.50.1820 338 630 1.1E-66 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS05520 7ef4ab436c27d8de3613a974ab903183 631 SUPERFAMILY SSF53474 375 630 9.52E-60 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS05520 7ef4ab436c27d8de3613a974ab903183 631 Pfam PF00326 Prolyl oligopeptidase family 421 630 4.5E-50 T 09-03-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 LS838_RS02560 73982a7916a78e47530da19f6e336d45 304 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 15 281 4.5E-22 T 09-03-2017 IPR017039 Virulence factor BrkB LS838_RS02560 73982a7916a78e47530da19f6e336d45 304 PIRSF PIRSF035875 3 293 1.5E-48 T 09-03-2017 IPR017039 Virulence factor BrkB LS838_RS02560 73982a7916a78e47530da19f6e336d45 304 Pfam PF03631 Virulence factor BrkB 26 281 1.3E-48 T 09-03-2017 IPR017039 Virulence factor BrkB LS838_RS07960 7ae03d6b9aae20b2e70825b208956562 136 Pfam PF01381 Helix-turn-helix 10 64 3.9E-14 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LS838_RS07960 7ae03d6b9aae20b2e70825b208956562 136 SUPERFAMILY SSF47413 10 69 1.66E-14 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS07960 7ae03d6b9aae20b2e70825b208956562 136 SMART SM00530 9 64 3.2E-13 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LS838_RS07960 7ae03d6b9aae20b2e70825b208956562 136 Gene3D G3DSA:1.10.260.40 10 66 1.1E-18 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS05710 cc097f13266da393c85ed09763a4eebc 285 SUPERFAMILY SSF52540 10 196 1.52E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05710 cc097f13266da393c85ed09763a4eebc 285 PIRSF PIRSF006230 1 282 6.1E-98 T 09-03-2017 IPR016478 GTPase, MTG1 LS838_RS05710 cc097f13266da393c85ed09763a4eebc 285 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 170 185 5.4E-5 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS05710 cc097f13266da393c85ed09763a4eebc 285 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 124 144 5.4E-5 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS05710 cc097f13266da393c85ed09763a4eebc 285 Pfam PF01926 50S ribosome-binding GTPase 123 216 7.3E-14 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS05710 cc097f13266da393c85ed09763a4eebc 285 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 4 277 6.7E-102 T 09-03-2017 IPR019991 GTP-binding protein, ribosome biogenesis LS838_RS05710 cc097f13266da393c85ed09763a4eebc 285 Gene3D G3DSA:3.40.50.300 17 178 7.6E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05710 cc097f13266da393c85ed09763a4eebc 285 Gene3D G3DSA:1.10.1580.10 181 271 1.9E-19 T 09-03-2017 IPR023179 GTP-binding protein, orthogonal bundle domain LS838_RS08770 a408b5bafcdd2a36d93136e41c5d8591 234 ProSitePatterns PS00221 MIP family signature. 63 71 - T 09-03-2017 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LS838_RS08770 a408b5bafcdd2a36d93136e41c5d8591 234 Gene3D G3DSA:1.20.1080.10 3 231 1.4E-71 T 09-03-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 LS838_RS08770 a408b5bafcdd2a36d93136e41c5d8591 234 PRINTS PR00783 Major intrinsic protein family signature 138 156 6.5E-38 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LS838_RS08770 a408b5bafcdd2a36d93136e41c5d8591 234 PRINTS PR00783 Major intrinsic protein family signature 45 69 6.5E-38 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LS838_RS08770 a408b5bafcdd2a36d93136e41c5d8591 234 PRINTS PR00783 Major intrinsic protein family signature 2 21 6.5E-38 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LS838_RS08770 a408b5bafcdd2a36d93136e41c5d8591 234 PRINTS PR00783 Major intrinsic protein family signature 82 101 6.5E-38 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LS838_RS08770 a408b5bafcdd2a36d93136e41c5d8591 234 PRINTS PR00783 Major intrinsic protein family signature 166 188 6.5E-38 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LS838_RS08770 a408b5bafcdd2a36d93136e41c5d8591 234 PRINTS PR00783 Major intrinsic protein family signature 213 233 6.5E-38 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LS838_RS08770 a408b5bafcdd2a36d93136e41c5d8591 234 SUPERFAMILY SSF81338 3 230 6.93E-61 T 09-03-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 LS838_RS08770 a408b5bafcdd2a36d93136e41c5d8591 234 Pfam PF00230 Major intrinsic protein 4 227 9.0E-40 T 09-03-2017 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 LS838_RS04130 19aa6b00230285126c278e2cdf79dc2d 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 6.9E-33 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LS838_RS04130 19aa6b00230285126c278e2cdf79dc2d 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 6.9E-33 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LS838_RS04130 19aa6b00230285126c278e2cdf79dc2d 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 6.9E-33 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LS838_RS04130 19aa6b00230285126c278e2cdf79dc2d 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 6.9E-33 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LS838_RS04130 19aa6b00230285126c278e2cdf79dc2d 282 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 6.9E-33 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LS838_RS04130 19aa6b00230285126c278e2cdf79dc2d 282 SUPERFAMILY SSF52096 31 274 9.59E-65 T 09-03-2017 IPR029045 ClpP/crotonase-like domain LS838_RS04130 19aa6b00230285126c278e2cdf79dc2d 282 Gene3D G3DSA:3.90.226.10 25 276 5.6E-58 T 09-03-2017 IPR029045 ClpP/crotonase-like domain LS838_RS04130 19aa6b00230285126c278e2cdf79dc2d 282 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 279 34.478 T 09-03-2017 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LS838_RS04130 19aa6b00230285126c278e2cdf79dc2d 282 Pfam PF01039 Carboxyl transferase domain 91 259 1.7E-17 T 09-03-2017 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LS838_RS06000 7e60828abb25406877196d87a1e716e7 596 SMART SM00382 381 567 4.4E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS06000 7e60828abb25406877196d87a1e716e7 596 ProSitePatterns PS00211 ABC transporters family signature. 493 507 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS06000 7e60828abb25406877196d87a1e716e7 596 SUPERFAMILY SSF52540 349 591 1.02E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06000 7e60828abb25406877196d87a1e716e7 596 Gene3D G3DSA:1.20.1560.10 24 341 1.4E-67 T 09-03-2017 LS838_RS06000 7e60828abb25406877196d87a1e716e7 596 SUPERFAMILY SSF90123 21 340 3.92E-66 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS06000 7e60828abb25406877196d87a1e716e7 596 Gene3D G3DSA:3.40.50.300 355 586 4.2E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06000 7e60828abb25406877196d87a1e716e7 596 Pfam PF00005 ABC transporter 372 521 3.7E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS06000 7e60828abb25406877196d87a1e716e7 596 Pfam PF00664 ABC transporter transmembrane region 40 309 5.1E-36 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS02870 5985dd64dc2625a6ff3569bba631fc47 326 Gene3D G3DSA:3.40.50.2300 157 288 2.5E-49 T 09-03-2017 LS838_RS02870 5985dd64dc2625a6ff3569bba631fc47 326 Pfam PF04392 ABC transporter substrate binding protein 34 319 6.2E-84 T 09-03-2017 IPR007487 ABC transporter, substrate-binding protein LS838_RS02870 5985dd64dc2625a6ff3569bba631fc47 326 Gene3D G3DSA:3.40.50.2300 31 156 2.6E-53 T 09-03-2017 LS838_RS02870 5985dd64dc2625a6ff3569bba631fc47 326 SUPERFAMILY SSF53822 41 284 2.36E-16 T 09-03-2017 IPR028082 Periplasmic binding protein-like I LS838_RS07695 680a0050b3aa3449233e8490f79fe1dd 617 SMART SM00900 12 85 4.1E-13 T 09-03-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 LS838_RS07695 680a0050b3aa3449233e8490f79fe1dd 617 Pfam PF00890 FAD binding domain 241 589 2.8E-51 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS07695 680a0050b3aa3449233e8490f79fe1dd 617 Pfam PF00890 FAD binding domain 111 164 8.0E-12 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS07695 680a0050b3aa3449233e8490f79fe1dd 617 Gene3D G3DSA:3.50.50.60 210 393 5.0E-86 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS07695 680a0050b3aa3449233e8490f79fe1dd 617 Gene3D G3DSA:3.50.50.60 545 604 5.0E-86 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS07695 680a0050b3aa3449233e8490f79fe1dd 617 Gene3D G3DSA:3.50.50.60 92 164 5.0E-86 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS07695 680a0050b3aa3449233e8490f79fe1dd 617 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 111 133 5.3E-7 T 09-03-2017 LS838_RS07695 680a0050b3aa3449233e8490f79fe1dd 617 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 565 580 5.3E-7 T 09-03-2017 LS838_RS07695 680a0050b3aa3449233e8490f79fe1dd 617 SUPERFAMILY SSF56425 419 549 1.64E-33 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS07695 680a0050b3aa3449233e8490f79fe1dd 617 Pfam PF04205 FMN-binding domain 12 83 9.4E-11 T 09-03-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 LS838_RS07695 680a0050b3aa3449233e8490f79fe1dd 617 Gene3D G3DSA:3.90.700.10 419 540 1.6E-31 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS07695 680a0050b3aa3449233e8490f79fe1dd 617 SUPERFAMILY SSF51905 99 169 1.24E-55 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS07695 680a0050b3aa3449233e8490f79fe1dd 617 SUPERFAMILY SSF51905 197 220 1.24E-55 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS07695 680a0050b3aa3449233e8490f79fe1dd 617 SUPERFAMILY SSF51905 548 605 1.24E-55 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS07695 680a0050b3aa3449233e8490f79fe1dd 617 SUPERFAMILY SSF51905 247 410 1.24E-55 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS05420 3a273e0462228970a017fab0e87440cf 265 SUPERFAMILY SSF102705 1 262 1.23E-84 T 09-03-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LS838_RS05420 3a273e0462228970a017fab0e87440cf 265 Gene3D G3DSA:3.40.1390.30 114 223 5.3E-35 T 09-03-2017 LS838_RS05420 3a273e0462228970a017fab0e87440cf 265 Gene3D G3DSA:3.40.1390.30 2 113 1.1E-45 T 09-03-2017 LS838_RS05420 3a273e0462228970a017fab0e87440cf 265 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 243 6.0E-76 T 09-03-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LS838_RS05420 3a273e0462228970a017fab0e87440cf 265 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 3 245 7.2E-62 T 09-03-2017 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 LS838_RS06730 9855cec6bbdfbef262c5685ecc5e0424 139 SUPERFAMILY SSF103473 3 71 5.89E-9 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS06730 9855cec6bbdfbef262c5685ecc5e0424 139 Gene3D G3DSA:1.20.1250.20 2 58 2.3E-6 T 09-03-2017 LS838_RS05125 4e40e5ee4ad3f4f33e351b0a145c540f 250 Gene3D G3DSA:3.40.50.300 4 235 2.5E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05125 4e40e5ee4ad3f4f33e351b0a145c540f 250 SMART SM00382 34 222 4.3E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS05125 4e40e5ee4ad3f4f33e351b0a145c540f 250 Pfam PF00005 ABC transporter 25 173 2.9E-35 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS05125 4e40e5ee4ad3f4f33e351b0a145c540f 250 SUPERFAMILY SSF52540 5 230 1.92E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06645 f6f62c0a3550c0bf419680ed09f3167f 173 ProSitePatterns PS00938 Initiation factor 3 signature. 54 67 - T 09-03-2017 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 LS838_RS06645 f6f62c0a3550c0bf419680ed09f3167f 173 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 79 165 6.5E-36 T 09-03-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 LS838_RS06645 f6f62c0a3550c0bf419680ed09f3167f 173 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 3 166 9.4E-65 T 09-03-2017 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 LS838_RS06645 f6f62c0a3550c0bf419680ed09f3167f 173 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 3 71 1.9E-30 T 09-03-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 LS838_RS06645 f6f62c0a3550c0bf419680ed09f3167f 173 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 167 27.287 T 09-03-2017 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 LS838_RS06645 f6f62c0a3550c0bf419680ed09f3167f 173 SUPERFAMILY SSF55200 79 168 6.93E-30 T 09-03-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 LS838_RS06645 f6f62c0a3550c0bf419680ed09f3167f 173 SUPERFAMILY SSF54364 2 74 1.57E-27 T 09-03-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 LS838_RS06645 f6f62c0a3550c0bf419680ed09f3167f 173 Gene3D G3DSA:3.10.20.80 3 74 1.6E-32 T 09-03-2017 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 LS838_RS06645 f6f62c0a3550c0bf419680ed09f3167f 173 Gene3D G3DSA:3.30.110.10 76 168 3.9E-36 T 09-03-2017 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 LS838_RS01675 71211b8737088d0e2d970585019232d0 1158 SMART SM00487 605 795 7.5E-33 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LS838_RS01675 71211b8737088d0e2d970585019232d0 1158 Pfam PF03461 TRCF domain 1010 1098 3.8E-25 T 09-03-2017 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 LS838_RS01675 71211b8737088d0e2d970585019232d0 1158 SUPERFAMILY SSF52540 787 993 4.37E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01675 71211b8737088d0e2d970585019232d0 1158 Gene3D G3DSA:3.30.2060.10 140 216 1.2E-15 T 09-03-2017 LS838_RS01675 71211b8737088d0e2d970585019232d0 1158 SUPERFAMILY SSF143517 994 1134 2.09E-31 T 09-03-2017 LS838_RS01675 71211b8737088d0e2d970585019232d0 1158 SUPERFAMILY SSF141259 475 553 7.32E-25 T 09-03-2017 IPR003711 CarD-like/TRCF domain LS838_RS01675 71211b8737088d0e2d970585019232d0 1158 Gene3D G3DSA:3.40.50.300 807 961 5.5E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01675 71211b8737088d0e2d970585019232d0 1158 Pfam PF00270 DEAD/DEAH box helicase 630 769 7.9E-16 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LS838_RS01675 71211b8737088d0e2d970585019232d0 1158 SUPERFAMILY SSF52540 21 353 1.67E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01675 71211b8737088d0e2d970585019232d0 1158 Gene3D G3DSA:3.40.50.300 597 791 3.5E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01675 71211b8737088d0e2d970585019232d0 1158 SMART SM01058 484 581 1.7E-49 T 09-03-2017 IPR003711 CarD-like/TRCF domain LS838_RS01675 71211b8737088d0e2d970585019232d0 1158 Pfam PF02559 CarD-like/TRCF domain 485 580 3.0E-29 T 09-03-2017 IPR003711 CarD-like/TRCF domain LS838_RS01675 71211b8737088d0e2d970585019232d0 1158 SMART SM00490 831 915 2.7E-20 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS01675 71211b8737088d0e2d970585019232d0 1158 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 44 1112 28.675 T 09-03-2017 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 LS838_RS01675 71211b8737088d0e2d970585019232d0 1158 SMART SM00982 1008 1108 1.7E-36 T 09-03-2017 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 LS838_RS01675 71211b8737088d0e2d970585019232d0 1158 Pfam PF00271 Helicase conserved C-terminal domain 813 914 1.2E-18 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS01675 71211b8737088d0e2d970585019232d0 1158 SUPERFAMILY SSF52540 529 788 1.6E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01675 71211b8737088d0e2d970585019232d0 1158 SUPERFAMILY SSF52540 365 473 9.29E-16 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01675 71211b8737088d0e2d970585019232d0 1158 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 155 1080 0.0 T 09-03-2017 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 LS838_RS04540 40d645680ac470a236e5ef2a9f519c5f 210 Pfam PF03838 Recombination protein U 32 197 2.1E-64 T 09-03-2017 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 LS838_RS04540 40d645680ac470a236e5ef2a9f519c5f 210 PIRSF PIRSF037785 24 207 4.6E-79 T 09-03-2017 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 LS838_RS04540 40d645680ac470a236e5ef2a9f519c5f 210 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 210 98.412 T 09-03-2017 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 LS838_RS04540 40d645680ac470a236e5ef2a9f519c5f 210 TIGRFAM TIGR00648 recU: recombination protein U 31 198 2.5E-66 T 09-03-2017 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 LS838_RS04540 40d645680ac470a236e5ef2a9f519c5f 210 Gene3D G3DSA:3.40.1350.10 33 202 2.1E-74 T 09-03-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 LS838_RS04540 40d645680ac470a236e5ef2a9f519c5f 210 SUPERFAMILY SSF52980 34 200 2.25E-64 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 LS838_RS02660 fd29a653bc87832527d84e777746c0c4 214 SUPERFAMILY SSF52833 4 186 1.38E-11 T 09-03-2017 IPR012336 Thioredoxin-like fold LS838_RS02660 fd29a653bc87832527d84e777746c0c4 214 Gene3D G3DSA:3.40.30.10 15 184 3.1E-12 T 09-03-2017 IPR012336 Thioredoxin-like fold LS838_RS02660 fd29a653bc87832527d84e777746c0c4 214 Pfam PF13743 Thioredoxin 5 173 1.3E-25 T 09-03-2017 LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 SUPERFAMILY SSF55874 443 624 7.47E-49 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 510 620 1.6E-27 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 Gene3D G3DSA:3.30.450.20 269 379 2.9E-13 T 09-03-2017 LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 Pfam PF00512 His Kinase A (phospho-acceptor) domain 388 454 2.1E-19 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 Pfam PF00989 PAS fold 274 328 5.5E-6 T 09-03-2017 IPR013767 PAS fold GO:0006355 LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 271 386 1.6E-5 T 09-03-2017 IPR000014 PAS domain LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 SUPERFAMILY SSF47384 374 454 7.46E-20 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 SMART SM00304 214 266 2.1E-14 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 SUPERFAMILY SSF55785 263 379 2.47E-10 T 09-03-2017 IPR000014 PAS domain LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 SUPERFAMILY SSF103190 102 189 4.71E-7 T 09-03-2017 IPR029151 Periplasmic sensor domain-like LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 Pfam PF00672 HAMP domain 195 261 3.1E-18 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 Gene3D G3DSA:1.10.287.130 380 439 3.4E-20 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 SUPERFAMILY SSF158472 214 262 1.16E-9 T 09-03-2017 LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 SMART SM00387 509 621 1.9E-41 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 Gene3D G3DSA:3.30.565.10 440 624 7.6E-52 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 SMART SM00388 387 454 2.2E-21 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 618 2.4E-20 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 PRINTS PR00344 Bacterial sensor protein C-terminal signature 564 574 2.4E-20 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 599 2.4E-20 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 560 2.4E-20 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LS838_RS00715 c601daffa43c8b8b253a3c5415f11d0d 631 SMART SM00091 273 339 4.1E-6 T 09-03-2017 IPR000014 PAS domain LS838_RS08470 4f8529aada0b96827c3bc319c920aef2 210 Gene3D G3DSA:3.40.50.300 1 204 8.5E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08470 4f8529aada0b96827c3bc319c920aef2 210 SUPERFAMILY SSF52540 1 205 2.42E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08470 4f8529aada0b96827c3bc319c920aef2 210 SMART SM00382 26 209 4.8E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS08470 4f8529aada0b96827c3bc319c920aef2 210 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS08470 4f8529aada0b96827c3bc319c920aef2 210 Pfam PF00005 ABC transporter 17 161 1.3E-35 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS03220 f810a797fbb7411faa73409466400369 503 SUPERFAMILY SSF52540 95 370 9.51E-95 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03220 f810a797fbb7411faa73409466400369 503 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 09-03-2017 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LS838_RS03220 f810a797fbb7411faa73409466400369 503 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 494 1.4E-46 T 09-03-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LS838_RS03220 f810a797fbb7411faa73409466400369 503 Gene3D G3DSA:2.40.30.20 2 93 2.8E-34 T 09-03-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 LS838_RS03220 f810a797fbb7411faa73409466400369 503 SUPERFAMILY SSF50615 10 94 1.78E-27 T 09-03-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LS838_RS03220 f810a797fbb7411faa73409466400369 503 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 92 3.7E-17 T 09-03-2017 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LS838_RS03220 f810a797fbb7411faa73409466400369 503 Gene3D G3DSA:1.20.150.20 372 498 7.3E-50 T 09-03-2017 LS838_RS03220 f810a797fbb7411faa73409466400369 503 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 499 3.7E-247 T 09-03-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 LS838_RS03220 f810a797fbb7411faa73409466400369 503 SUPERFAMILY SSF47917 373 498 8.37E-46 T 09-03-2017 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LS838_RS03220 f810a797fbb7411faa73409466400369 503 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 2.6E-67 T 09-03-2017 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 LS838_RS03220 f810a797fbb7411faa73409466400369 503 Gene3D G3DSA:3.40.50.300 94 371 1.0E-109 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03220 f810a797fbb7411faa73409466400369 503 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 499 49.372 T 09-03-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 LS838_RS03220 f810a797fbb7411faa73409466400369 503 PIRSF PIRSF039088 1 501 7.4E-235 T 09-03-2017 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 LS838_RS08875 0131a8ff59514a388cadcbc826b89d75 359 Pfam PF14897 EpsG family 22 309 1.2E-17 T 09-03-2017 LS838_RS00220 45a4812d0f9a365070be7409acc182c0 303 PIRSF PIRSF000398 1 303 1.2E-45 T 09-03-2017 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 LS838_RS00220 45a4812d0f9a365070be7409acc182c0 303 SUPERFAMILY SSF53335 5 89 3.45E-44 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS00220 45a4812d0f9a365070be7409acc182c0 303 SUPERFAMILY SSF53335 118 302 3.45E-44 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS00220 45a4812d0f9a365070be7409acc182c0 303 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 281 8.3E-30 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LS838_RS00220 45a4812d0f9a365070be7409acc182c0 303 Gene3D G3DSA:1.10.1020.10 83 181 6.2E-19 T 09-03-2017 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 LS838_RS00220 45a4812d0f9a365070be7409acc182c0 303 TIGRFAM TIGR00571 dam: DNA adenine methylase 6 302 1.4E-39 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LS838_RS00220 45a4812d0f9a365070be7409acc182c0 303 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 210 216 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LS838_RS00220 45a4812d0f9a365070be7409acc182c0 303 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 1.3E-14 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LS838_RS00220 45a4812d0f9a365070be7409acc182c0 303 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 51 64 1.3E-14 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LS838_RS00220 45a4812d0f9a365070be7409acc182c0 303 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 207 219 1.3E-14 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LS838_RS00220 45a4812d0f9a365070be7409acc182c0 303 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 32 46 1.3E-14 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LS838_RS00220 45a4812d0f9a365070be7409acc182c0 303 Gene3D G3DSA:3.40.50.150 5 60 2.4E-40 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS00220 45a4812d0f9a365070be7409acc182c0 303 Gene3D G3DSA:3.40.50.150 190 302 2.4E-40 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS04585 b1e9fc864eef2c6bc040ca490dd6af72 304 SUPERFAMILY SSF55174 14 100 4.71E-15 T 09-03-2017 LS838_RS04585 b1e9fc864eef2c6bc040ca490dd6af72 304 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 133 147 - T 09-03-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS04585 b1e9fc864eef2c6bc040ca490dd6af72 304 SUPERFAMILY SSF55120 73 299 1.18E-78 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS04585 b1e9fc864eef2c6bc040ca490dd6af72 304 Gene3D G3DSA:3.10.290.10 14 62 2.7E-15 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS04585 b1e9fc864eef2c6bc040ca490dd6af72 304 Pfam PF01479 S4 domain 14 60 3.2E-12 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS04585 b1e9fc864eef2c6bc040ca490dd6af72 304 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 10 298 2.8E-103 T 09-03-2017 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS04585 b1e9fc864eef2c6bc040ca490dd6af72 304 SMART SM00363 14 78 7.6E-15 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS04585 b1e9fc864eef2c6bc040ca490dd6af72 304 Pfam PF00849 RNA pseudouridylate synthase 87 240 3.1E-39 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS08685 8d23e61b064cb64b420ba31a20c759ee 290 PRINTS PR00624 Histone H5 signature 122 146 2.1E-5 T 09-03-2017 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 LS838_RS08685 8d23e61b064cb64b420ba31a20c759ee 290 PRINTS PR00624 Histone H5 signature 214 233 2.1E-5 T 09-03-2017 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 LS838_RS08685 8d23e61b064cb64b420ba31a20c759ee 290 PRINTS PR00624 Histone H5 signature 52 73 2.1E-5 T 09-03-2017 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 LS838_RS08685 8d23e61b064cb64b420ba31a20c759ee 290 PRINTS PR00624 Histone H5 signature 192 209 2.1E-5 T 09-03-2017 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 LS838_RS08685 8d23e61b064cb64b420ba31a20c759ee 290 PRINTS PR00624 Histone H5 signature 157 171 2.1E-5 T 09-03-2017 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 LS838_RS07820 05c405b01d5e92afb03849c4e837c6ee 287 TIGRFAM TIGR00191 thrB: homoserine kinase 1 283 3.7E-70 T 09-03-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 LS838_RS07820 05c405b01d5e92afb03849c4e837c6ee 287 Pfam PF08544 GHMP kinases C terminal 192 268 1.6E-7 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain LS838_RS07820 05c405b01d5e92afb03849c4e837c6ee 287 Pfam PF00288 GHMP kinases N terminal domain 70 130 4.4E-11 T 09-03-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 LS838_RS07820 05c405b01d5e92afb03849c4e837c6ee 287 PIRSF PIRSF000676 1 287 3.2E-78 T 09-03-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 LS838_RS07820 05c405b01d5e92afb03849c4e837c6ee 287 Gene3D G3DSA:3.30.70.890 152 278 1.2E-33 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain LS838_RS07820 05c405b01d5e92afb03849c4e837c6ee 287 SUPERFAMILY SSF55060 153 268 2.3E-30 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain LS838_RS07820 05c405b01d5e92afb03849c4e837c6ee 287 PRINTS PR00958 Homoserine kinase signature 156 173 3.0E-38 T 09-03-2017 LS838_RS07820 05c405b01d5e92afb03849c4e837c6ee 287 PRINTS PR00958 Homoserine kinase signature 236 251 3.0E-38 T 09-03-2017 LS838_RS07820 05c405b01d5e92afb03849c4e837c6ee 287 PRINTS PR00958 Homoserine kinase signature 118 131 3.0E-38 T 09-03-2017 LS838_RS07820 05c405b01d5e92afb03849c4e837c6ee 287 PRINTS PR00958 Homoserine kinase signature 84 99 3.0E-38 T 09-03-2017 LS838_RS07820 05c405b01d5e92afb03849c4e837c6ee 287 PRINTS PR00958 Homoserine kinase signature 8 23 3.0E-38 T 09-03-2017 LS838_RS07820 05c405b01d5e92afb03849c4e837c6ee 287 Gene3D G3DSA:3.30.230.10 1 141 2.3E-40 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LS838_RS07820 05c405b01d5e92afb03849c4e837c6ee 287 Hamap MF_00384 Homoserine kinase [thrB]. 1 285 29.623 T 09-03-2017 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 LS838_RS07820 05c405b01d5e92afb03849c4e837c6ee 287 SUPERFAMILY SSF54211 2 143 3.26E-26 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LS838_RS07820 05c405b01d5e92afb03849c4e837c6ee 287 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 77 88 - T 09-03-2017 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 LS838_RS00905 722fdc3e89dc6c4317b54071fa2589da 330 Gene3D G3DSA:3.40.50.2020 170 290 9.1E-38 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS00905 722fdc3e89dc6c4317b54071fa2589da 330 SUPERFAMILY SSF53271 10 166 1.16E-50 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS00905 722fdc3e89dc6c4317b54071fa2589da 330 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 13 129 3.5E-41 T 09-03-2017 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 LS838_RS00905 722fdc3e89dc6c4317b54071fa2589da 330 Pfam PF14572 Phosphoribosyl synthetase-associated domain 218 321 4.5E-20 T 09-03-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 LS838_RS00905 722fdc3e89dc6c4317b54071fa2589da 330 SUPERFAMILY SSF53271 115 313 2.02E-41 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS00905 722fdc3e89dc6c4317b54071fa2589da 330 SMART SM01400 13 129 1.1E-60 T 09-03-2017 LS838_RS00905 722fdc3e89dc6c4317b54071fa2589da 330 Gene3D G3DSA:3.40.50.2020 11 169 1.6E-65 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS00905 722fdc3e89dc6c4317b54071fa2589da 330 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 13 322 1.3E-94 T 09-03-2017 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 LS838_RS01895 b191279a031671370ef218e33580f803 180 PIRSF PIRSF002161 1 180 1.6E-64 T 09-03-2017 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01895 b191279a031671370ef218e33580f803 180 Gene3D G3DSA:3.30.1440.10 5 179 4.6E-75 T 09-03-2017 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01895 b191279a031671370ef218e33580f803 180 Pfam PF00673 ribosomal L5P family C-terminus 86 178 5.1E-39 T 09-03-2017 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01895 b191279a031671370ef218e33580f803 180 SUPERFAMILY SSF55282 6 179 1.65E-74 T 09-03-2017 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01895 b191279a031671370ef218e33580f803 180 Pfam PF00281 Ribosomal protein L5 26 81 2.4E-27 T 09-03-2017 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01895 b191279a031671370ef218e33580f803 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 09-03-2017 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01895 b191279a031671370ef218e33580f803 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 43.534 T 09-03-2017 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS04060 6b0266d974a6a610099af210de4d68e0 145 SUPERFAMILY SSF69500 1 144 1.44E-54 T 09-03-2017 IPR023509 D-Tyr tRNAtyr deacylase-like domain LS838_RS04060 6b0266d974a6a610099af210de4d68e0 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.124 T 09-03-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 LS838_RS04060 6b0266d974a6a610099af210de4d68e0 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 3.8E-53 T 09-03-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 LS838_RS04060 6b0266d974a6a610099af210de4d68e0 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 2.3E-53 T 09-03-2017 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 LS838_RS04060 6b0266d974a6a610099af210de4d68e0 145 Gene3D G3DSA:3.50.80.10 1 144 3.0E-59 T 09-03-2017 IPR023509 D-Tyr tRNAtyr deacylase-like domain LS838_RS03260 b3b23e0758164675eb7637cad7eccaf8 396 Pfam PF01098 Cell cycle protein 18 385 4.3E-87 T 09-03-2017 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 LS838_RS02585 a4446d2a9e3f09f1a0df71a619560d22 271 Pfam PF02631 RecX family 83 203 8.0E-24 T 09-03-2017 IPR003783 Regulatory protein RecX GO:0006282 LS838_RS02585 a4446d2a9e3f09f1a0df71a619560d22 271 Pfam PF02631 RecX family 200 259 1.3E-4 T 09-03-2017 IPR003783 Regulatory protein RecX GO:0006282 LS838_RS02585 a4446d2a9e3f09f1a0df71a619560d22 271 Gene3D G3DSA:1.10.10.10 108 150 1.4E-7 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS02585 a4446d2a9e3f09f1a0df71a619560d22 271 Hamap MF_01114 Regulatory protein RecX [recX]. 41 208 15.506 T 09-03-2017 IPR003783 Regulatory protein RecX GO:0006282 LS838_RS04785 7185409bb9ddbc3b108e8dc5b1243e3e 416 Gene3D G3DSA:3.50.50.60 13 260 9.8E-43 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS04785 7185409bb9ddbc3b108e8dc5b1243e3e 416 SUPERFAMILY SSF56425 301 413 4.45E-16 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS04785 7185409bb9ddbc3b108e8dc5b1243e3e 416 Pfam PF00890 FAD binding domain 24 269 6.3E-29 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS04785 7185409bb9ddbc3b108e8dc5b1243e3e 416 SUPERFAMILY SSF51905 163 264 8.75E-30 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS04785 7185409bb9ddbc3b108e8dc5b1243e3e 416 SUPERFAMILY SSF51905 16 133 8.75E-30 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS04785 7185409bb9ddbc3b108e8dc5b1243e3e 416 Gene3D G3DSA:3.90.700.10 301 412 7.0E-17 T 09-03-2017 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS03105 513a8936460a71580c9fe53541456dc4 332 PIRSF PIRSF026567 1 332 3.5E-117 T 09-03-2017 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted LS838_RS03105 513a8936460a71580c9fe53541456dc4 332 SUPERFAMILY SSF53335 30 313 1.24E-45 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS03105 513a8936460a71580c9fe53541456dc4 332 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 221 245 2.1E-5 T 09-03-2017 LS838_RS03105 513a8936460a71580c9fe53541456dc4 332 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 121 135 2.1E-5 T 09-03-2017 LS838_RS03105 513a8936460a71580c9fe53541456dc4 332 Pfam PF02384 N-6 DNA Methylase 77 315 1.3E-20 T 09-03-2017 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 LS838_RS03105 513a8936460a71580c9fe53541456dc4 332 Gene3D G3DSA:3.40.50.150 85 276 1.1E-25 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS01025 ecc12397dcebd0f915f0d28ecc4c2926 159 SUPERFAMILY SSF54001 1 140 3.43E-8 T 09-03-2017 LS838_RS01025 ecc12397dcebd0f915f0d28ecc4c2926 159 Gene3D G3DSA:2.30.30.330 2 126 2.2E-7 T 09-03-2017 LS838_RS02810 1215bf5976a6056a8ddbbc23337d32bc 338 Gene3D G3DSA:3.40.50.720 1 187 3.8E-57 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS02810 1215bf5976a6056a8ddbbc23337d32bc 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 56 83 2.1E-42 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS02810 1215bf5976a6056a8ddbbc23337d32bc 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 137 157 2.1E-42 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS02810 1215bf5976a6056a8ddbbc23337d32bc 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 2.1E-42 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS02810 1215bf5976a6056a8ddbbc23337d32bc 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 2.1E-42 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS02810 1215bf5976a6056a8ddbbc23337d32bc 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 2.1E-42 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS02810 1215bf5976a6056a8ddbbc23337d32bc 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 2.1E-42 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS02810 1215bf5976a6056a8ddbbc23337d32bc 338 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 326 35.095 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS02810 1215bf5976a6056a8ddbbc23337d32bc 338 SUPERFAMILY SSF48179 183 335 2.72E-58 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LS838_RS02810 1215bf5976a6056a8ddbbc23337d32bc 338 Gene3D G3DSA:1.10.1040.10 188 330 2.8E-59 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LS838_RS02810 1215bf5976a6056a8ddbbc23337d32bc 338 PIRSF PIRSF000114 1 336 1.6E-104 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS02810 1215bf5976a6056a8ddbbc23337d32bc 338 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 322 2.2E-53 T 09-03-2017 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS02810 1215bf5976a6056a8ddbbc23337d32bc 338 SUPERFAMILY SSF51735 3 182 3.28E-49 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS02810 1215bf5976a6056a8ddbbc23337d32bc 338 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS02810 1215bf5976a6056a8ddbbc23337d32bc 338 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 162 1.1E-43 T 09-03-2017 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS02145 93695f7f7e4d4d9df390aafb33ea8057 217 SMART SM00047 56 216 2.5E-45 T 09-03-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 LS838_RS02145 93695f7f7e4d4d9df390aafb33ea8057 217 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 77 212 9.8E-25 T 09-03-2017 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 LS838_RS02145 93695f7f7e4d4d9df390aafb33ea8057 217 PRINTS PR01002 Flagellar protein FlgJ signature 193 211 1.7E-5 T 09-03-2017 LS838_RS02145 93695f7f7e4d4d9df390aafb33ea8057 217 PRINTS PR01002 Flagellar protein FlgJ signature 88 106 1.7E-5 T 09-03-2017 LS838_RS09945 12e2035d43720264e7f4cebc2d6e5461 121 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 8 103 1.0E-35 T 09-03-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 LS838_RS09945 12e2035d43720264e7f4cebc2d6e5461 121 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 2 106 4.9E-23 T 09-03-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 LS838_RS09945 12e2035d43720264e7f4cebc2d6e5461 121 Pfam PF00825 Ribonuclease P 1 107 6.0E-32 T 09-03-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 LS838_RS09945 12e2035d43720264e7f4cebc2d6e5461 121 SUPERFAMILY SSF54211 1 112 1.24E-30 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LS838_RS09945 12e2035d43720264e7f4cebc2d6e5461 121 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 112 18.425 T 09-03-2017 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 LS838_RS09945 12e2035d43720264e7f4cebc2d6e5461 121 Gene3D G3DSA:3.30.230.10 1 114 3.4E-34 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LS838_RS02140 20379d8377e5d3356a9951ff880f0bd5 207 Pfam PF12822 Protein of unknown function (DUF3816) 13 196 7.1E-12 T 09-03-2017 IPR024529 ECF transporter, substrate-specific component GO:0005215 LS838_RS02510 803a79ceb86b7a8e56b8edbeb6b28a2d 427 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 21 418 7.4E-134 T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 LS838_RS02510 803a79ceb86b7a8e56b8edbeb6b28a2d 427 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 342 362 - T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 LS838_RS02510 803a79ceb86b7a8e56b8edbeb6b28a2d 427 Pfam PF00860 Permease family 25 395 1.5E-102 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LS838_RS00925 9d04af1772293ffcf64e491e43e6f6d1 451 Pfam PF00188 Cysteine-rich secretory protein family 83 208 2.8E-5 T 09-03-2017 IPR014044 CAP domain LS838_RS00925 9d04af1772293ffcf64e491e43e6f6d1 451 SUPERFAMILY SSF55797 75 210 8.72E-5 T 09-03-2017 IPR014044 CAP domain LS838_RS03035 51af74a8f75f1f9340e610e056064e3c 152 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 149 6.2E-31 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily LS838_RS03035 51af74a8f75f1f9340e610e056064e3c 152 SMART SM00226 2 151 3.4E-32 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily LS838_RS03035 51af74a8f75f1f9340e610e056064e3c 152 Gene3D G3DSA:3.40.50.270 1 152 5.7E-46 T 09-03-2017 LS838_RS03035 51af74a8f75f1f9340e610e056064e3c 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 85 100 4.4E-12 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 LS838_RS03035 51af74a8f75f1f9340e610e056064e3c 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 4.4E-12 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 LS838_RS03035 51af74a8f75f1f9340e610e056064e3c 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 125 140 4.4E-12 T 09-03-2017 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 LS838_RS03035 51af74a8f75f1f9340e610e056064e3c 152 SUPERFAMILY SSF52788 1 152 1.13E-42 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily LS838_RS09930 e5d1af394a2b6a56f4353ac737d93173 631 Pfam PF01134 Glucose inhibited division protein A 10 401 1.0E-166 T 09-03-2017 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 LS838_RS09930 e5d1af394a2b6a56f4353ac737d93173 631 SMART SM01228 548 619 4.1E-40 T 09-03-2017 LS838_RS09930 e5d1af394a2b6a56f4353ac737d93173 631 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 6.1E-6 T 09-03-2017 LS838_RS09930 e5d1af394a2b6a56f4353ac737d93173 631 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 162 6.1E-6 T 09-03-2017 LS838_RS09930 e5d1af394a2b6a56f4353ac737d93173 631 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 2.2E-5 T 09-03-2017 LS838_RS09930 e5d1af394a2b6a56f4353ac737d93173 631 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 2.2E-5 T 09-03-2017 LS838_RS09930 e5d1af394a2b6a56f4353ac737d93173 631 SUPERFAMILY SSF51905 8 68 7.25E-46 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS09930 e5d1af394a2b6a56f4353ac737d93173 631 SUPERFAMILY SSF51905 99 264 7.25E-46 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS09930 e5d1af394a2b6a56f4353ac737d93173 631 Gene3D G3DSA:3.50.50.60 8 225 4.0E-37 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS09930 e5d1af394a2b6a56f4353ac737d93173 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 9 623 1.1E-273 T 09-03-2017 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 LS838_RS09930 e5d1af394a2b6a56f4353ac737d93173 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 276 290 - T 09-03-2017 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 LS838_RS09930 e5d1af394a2b6a56f4353ac737d93173 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 371 394 - T 09-03-2017 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 LS838_RS09930 e5d1af394a2b6a56f4353ac737d93173 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 7 626 41.703 T 09-03-2017 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 LS838_RS09930 e5d1af394a2b6a56f4353ac737d93173 631 Pfam PF13932 GidA associated domain 404 617 6.5E-70 T 09-03-2017 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 LS838_RS06245 1f0a782995d096a865360a9d2ab4232c 63 SUPERFAMILY SSF53850 13 63 1.63E-5 T 09-03-2017 LS838_RS06245 1f0a782995d096a865360a9d2ab4232c 63 Gene3D G3DSA:3.40.190.10 13 63 5.5E-9 T 09-03-2017 LS838_RS05510 dbb22d9a40565b2938f298b2d1a4ab9d 218 Gene3D G3DSA:3.40.50.150 18 112 1.1E-11 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS05510 dbb22d9a40565b2938f298b2d1a4ab9d 218 Pfam PF02384 N-6 DNA Methylase 5 170 6.2E-44 T 09-03-2017 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 LS838_RS05510 dbb22d9a40565b2938f298b2d1a4ab9d 218 SUPERFAMILY SSF53335 15 203 1.7E-43 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS05675 19fb10c1dae074e1f00dcf66a01c2843 464 Gene3D G3DSA:1.10.8.60 355 464 3.9E-35 T 09-03-2017 LS838_RS05675 19fb10c1dae074e1f00dcf66a01c2843 464 Gene3D G3DSA:1.10.8.10 234 264 3.6E-20 T 09-03-2017 LS838_RS05675 19fb10c1dae074e1f00dcf66a01c2843 464 Gene3D G3DSA:1.10.8.10 111 200 3.6E-20 T 09-03-2017 LS838_RS05675 19fb10c1dae074e1f00dcf66a01c2843 464 SMART SM01086 356 450 1.5E-21 T 09-03-2017 IPR019489 Clp ATPase, C-terminal LS838_RS05675 19fb10c1dae074e1f00dcf66a01c2843 464 Pfam PF07724 AAA domain (Cdc48 subfamily) 52 115 1.8E-6 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LS838_RS05675 19fb10c1dae074e1f00dcf66a01c2843 464 Pfam PF07724 AAA domain (Cdc48 subfamily) 211 350 2.8E-36 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LS838_RS05675 19fb10c1dae074e1f00dcf66a01c2843 464 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 464 41.471 T 09-03-2017 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 LS838_RS05675 19fb10c1dae074e1f00dcf66a01c2843 464 SMART SM00382 49 353 6.1E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS05675 19fb10c1dae074e1f00dcf66a01c2843 464 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 5 464 1.0E-182 T 09-03-2017 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 LS838_RS05675 19fb10c1dae074e1f00dcf66a01c2843 464 SUPERFAMILY SSF52540 5 459 6.19E-79 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05675 19fb10c1dae074e1f00dcf66a01c2843 464 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 356 430 2.0E-7 T 09-03-2017 IPR019489 Clp ATPase, C-terminal LS838_RS05675 19fb10c1dae074e1f00dcf66a01c2843 464 Gene3D G3DSA:3.40.50.300 4 110 1.4E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05675 19fb10c1dae074e1f00dcf66a01c2843 464 Gene3D G3DSA:3.40.50.300 266 352 1.4E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03295 9c8ed2c2851c5661828dd3849c0ac2d0 385 SUPERFAMILY SSF53383 1 375 2.83E-99 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase LS838_RS03295 9c8ed2c2851c5661828dd3849c0ac2d0 385 Pfam PF00266 Aminotransferase class-V 2 366 2.4E-71 T 09-03-2017 IPR000192 Aminotransferase class V domain LS838_RS03295 9c8ed2c2851c5661828dd3849c0ac2d0 385 Gene3D G3DSA:3.40.640.10 14 247 6.3E-77 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LS838_RS03295 9c8ed2c2851c5661828dd3849c0ac2d0 385 Gene3D G3DSA:3.90.1150.10 248 373 7.6E-29 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LS838_RS03295 9c8ed2c2851c5661828dd3849c0ac2d0 385 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 09-03-2017 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site LS838_RS03295 9c8ed2c2851c5661828dd3849c0ac2d0 385 PIRSF PIRSF005572 1 381 3.5E-113 T 09-03-2017 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 LS838_RS03465 b6a44505c50c317e3bac8e8b7d132d1f 218 Pfam PF14559 Tetratricopeptide repeat 42 98 1.1E-8 T 09-03-2017 LS838_RS03465 b6a44505c50c317e3bac8e8b7d132d1f 218 Gene3D G3DSA:1.25.40.10 6 109 5.4E-14 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LS838_RS03465 b6a44505c50c317e3bac8e8b7d132d1f 218 Gene3D G3DSA:1.25.40.10 110 206 5.7E-8 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LS838_RS03465 b6a44505c50c317e3bac8e8b7d132d1f 218 SUPERFAMILY SSF48452 6 192 4.88E-15 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LS838_RS04350 e67c92336b04c1c0072246a38c6d712a 324 Gene3D G3DSA:3.60.60.10 2 321 1.9E-104 T 09-03-2017 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 Reactome: R-HSA-1660662 LS838_RS04350 e67c92336b04c1c0072246a38c6d712a 324 SUPERFAMILY SSF56235 2 322 3.24E-98 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LS838_RS04350 e67c92336b04c1c0072246a38c6d712a 324 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 2 311 1.1E-100 T 09-03-2017 IPR029132 Choloylglycine hydrolase/NAAA C-terminal LS838_RS07380 f168f9d4d789cabc4dcf6dc366802f85 121 Gene3D G3DSA:3.30.1390.10 51 121 1.3E-26 T 09-03-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LS838_RS07380 f168f9d4d789cabc4dcf6dc366802f85 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 1.0E-12 T 09-03-2017 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS07380 f168f9d4d789cabc4dcf6dc366802f85 121 Gene3D G3DSA:1.20.5.710 2 50 1.9E-20 T 09-03-2017 LS838_RS07380 f168f9d4d789cabc4dcf6dc366802f85 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 5.4E-25 T 09-03-2017 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS07380 f168f9d4d789cabc4dcf6dc366802f85 121 SUPERFAMILY SSF54736 51 121 5.41E-21 T 09-03-2017 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like LS838_RS07380 f168f9d4d789cabc4dcf6dc366802f85 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 6 50 7.5E-18 T 09-03-2017 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS07380 f168f9d4d789cabc4dcf6dc366802f85 121 SUPERFAMILY SSF48300 4 51 4.05E-13 T 09-03-2017 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS07380 f168f9d4d789cabc4dcf6dc366802f85 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 21.652 T 09-03-2017 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS07380 f168f9d4d789cabc4dcf6dc366802f85 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 2.6E-40 T 09-03-2017 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS09120 073fae21b9a81b37f863fd21b8b57182 366 PIRSF PIRSF006641 1 366 2.4E-153 T 09-03-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 LS838_RS09120 073fae21b9a81b37f863fd21b8b57182 366 Gene3D G3DSA:3.10.20.30 271 366 6.2E-48 T 09-03-2017 IPR012675 Beta-grasp domain LS838_RS09120 073fae21b9a81b37f863fd21b8b57182 366 SUPERFAMILY SSF52540 3 304 8.3E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09120 073fae21b9a81b37f863fd21b8b57182 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 43.25 T 09-03-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 LS838_RS09120 073fae21b9a81b37f863fd21b8b57182 366 Gene3D G3DSA:3.40.50.300 4 130 1.8E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09120 073fae21b9a81b37f863fd21b8b57182 366 Gene3D G3DSA:3.40.50.300 201 270 1.8E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09120 073fae21b9a81b37f863fd21b8b57182 366 Gene3D G3DSA:1.10.150.300 131 200 7.7E-28 T 09-03-2017 IPR023192 TGS-like domain LS838_RS09120 073fae21b9a81b37f863fd21b8b57182 366 Pfam PF01926 50S ribosome-binding GTPase 5 122 8.5E-24 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS09120 073fae21b9a81b37f863fd21b8b57182 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 1.4E-38 T 09-03-2017 IPR013029 Domain of unknown function DUF933 LS838_RS09120 073fae21b9a81b37f863fd21b8b57182 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.2E-36 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS09120 073fae21b9a81b37f863fd21b8b57182 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 6.2E-36 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS09120 073fae21b9a81b37f863fd21b8b57182 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 6.2E-36 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS09120 073fae21b9a81b37f863fd21b8b57182 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 6.2E-36 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS09120 073fae21b9a81b37f863fd21b8b57182 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 2.0E-147 T 09-03-2017 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 LS838_RS09120 073fae21b9a81b37f863fd21b8b57182 366 SUPERFAMILY SSF81271 282 366 2.4E-34 T 09-03-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 LS838_RS05105 bd025d2b26dba882cbb772025e691118 154 Pfam PF11391 Protein of unknown function (DUF2798) 93 146 1.8E-5 T 09-03-2017 IPR021529 Protein of unknown function DUF2798 LS838_RS08735 779e1d505b07c261df1e0e6e51b8e558 79 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 1 56 3.9E-17 T 09-03-2017 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 LS838_RS08735 779e1d505b07c261df1e0e6e51b8e558 79 Gene3D G3DSA:1.10.260.40 1 66 1.1E-17 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS08735 779e1d505b07c261df1e0e6e51b8e558 79 SUPERFAMILY SSF47413 1 64 2.02E-13 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS05830 355be85784ff0b02bb358ee6ceb06d5b 341 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 31 340 1.1E-104 T 09-03-2017 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: R-HSA-70895 LS838_RS05830 355be85784ff0b02bb358ee6ceb06d5b 341 PIRSF PIRSF006468 1 341 6.3E-111 T 09-03-2017 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: R-HSA-70895 LS838_RS05830 355be85784ff0b02bb358ee6ceb06d5b 341 SUPERFAMILY SSF56752 3 337 4.45E-93 T 09-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 LS838_RS05830 355be85784ff0b02bb358ee6ceb06d5b 341 Gene3D G3DSA:3.20.10.10 163 326 8.9E-52 T 09-03-2017 LS838_RS05830 355be85784ff0b02bb358ee6ceb06d5b 341 Pfam PF01063 Amino-transferase class IV 56 295 4.8E-31 T 09-03-2017 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 LS838_RS05830 355be85784ff0b02bb358ee6ceb06d5b 341 Gene3D G3DSA:3.30.470.10 3 162 8.2E-62 T 09-03-2017 LS838_RS09040 35e9766afdd656d8c5d6eb66b3f97a5b 408 SUPERFAMILY SSF51395 19 363 1.47E-92 T 09-03-2017 LS838_RS09040 35e9766afdd656d8c5d6eb66b3f97a5b 408 Gene3D G3DSA:3.20.20.70 19 365 2.9E-126 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LS838_RS09040 35e9766afdd656d8c5d6eb66b3f97a5b 408 PIRSF PIRSF000138 1 370 4.8E-140 T 09-03-2017 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 LS838_RS09040 35e9766afdd656d8c5d6eb66b3f97a5b 408 Pfam PF01070 FMN-dependent dehydrogenase 29 365 1.1E-114 T 09-03-2017 IPR000262 FMN-dependent dehydrogenase GO:0016491 LS838_RS05475 07c458d6874aa9cd8dc9d3a26c509c68 1166 Gene3D G3DSA:3.40.50.150 301 392 1.6E-47 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS05475 07c458d6874aa9cd8dc9d3a26c509c68 1166 Gene3D G3DSA:3.40.50.150 462 589 1.6E-47 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS05475 07c458d6874aa9cd8dc9d3a26c509c68 1166 Gene3D G3DSA:3.40.50.150 239 256 1.6E-47 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS05475 07c458d6874aa9cd8dc9d3a26c509c68 1166 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 474 480 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LS838_RS05475 07c458d6874aa9cd8dc9d3a26c509c68 1166 SUPERFAMILY SSF53335 58 256 4.07E-62 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS05475 07c458d6874aa9cd8dc9d3a26c509c68 1166 SUPERFAMILY SSF53335 301 382 4.07E-62 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS05475 07c458d6874aa9cd8dc9d3a26c509c68 1166 SUPERFAMILY SSF53335 462 649 4.07E-62 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS05475 07c458d6874aa9cd8dc9d3a26c509c68 1166 Pfam PF07669 Eco57I restriction-modification methylase 470 554 6.6E-6 T 09-03-2017 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 LS838_RS05475 07c458d6874aa9cd8dc9d3a26c509c68 1166 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 504 528 2.9E-8 T 09-03-2017 LS838_RS05475 07c458d6874aa9cd8dc9d3a26c509c68 1166 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 471 483 2.9E-8 T 09-03-2017 LS838_RS05475 07c458d6874aa9cd8dc9d3a26c509c68 1166 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 305 319 2.9E-8 T 09-03-2017 LS838_RS05475 07c458d6874aa9cd8dc9d3a26c509c68 1166 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 237 253 2.9E-8 T 09-03-2017 LS838_RS00550 b47b4e32b74025f1fa6767389fc2b59a 302 SUPERFAMILY SSF46785 1 86 2.05E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS00550 b47b4e32b74025f1fa6767389fc2b59a 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.4E-17 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS00550 b47b4e32b74025f1fa6767389fc2b59a 302 Gene3D G3DSA:3.40.190.10 185 265 9.3E-8 T 09-03-2017 LS838_RS00550 b47b4e32b74025f1fa6767389fc2b59a 302 Pfam PF03466 LysR substrate binding domain 120 297 1.7E-8 T 09-03-2017 IPR005119 LysR, substrate-binding LS838_RS00550 b47b4e32b74025f1fa6767389fc2b59a 302 Gene3D G3DSA:3.40.190.10 117 184 1.0E-7 T 09-03-2017 LS838_RS00550 b47b4e32b74025f1fa6767389fc2b59a 302 Gene3D G3DSA:1.10.10.10 1 80 8.9E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS00550 b47b4e32b74025f1fa6767389fc2b59a 302 SUPERFAMILY SSF53850 85 296 3.62E-20 T 09-03-2017 LS838_RS00550 b47b4e32b74025f1fa6767389fc2b59a 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.3E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS00550 b47b4e32b74025f1fa6767389fc2b59a 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.3E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS00550 b47b4e32b74025f1fa6767389fc2b59a 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.3E-7 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 SUPERFAMILY SSF81653 100 191 1.96E-24 T 09-03-2017 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 506 522 5.9E-8 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 534 550 5.9E-8 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 397 415 5.9E-8 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 565 590 5.9E-8 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 Pfam PF00122 E1-E2 ATPase 68 288 6.1E-54 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 Gene3D G3DSA:3.40.1110.10 287 313 3.3E-7 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 505 618 5.9E-26 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 71 327 4.3E-36 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 Pfam PF00702 haloacid dehalogenase-like hydrolase 293 548 4.0E-26 T 09-03-2017 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 SUPERFAMILY SSF81665 583 764 5.1E-63 T 09-03-2017 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 SUPERFAMILY SSF81665 2 99 5.1E-63 T 09-03-2017 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 SUPERFAMILY SSF81665 197 291 5.1E-63 T 09-03-2017 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 Gene3D G3DSA:3.40.1110.10 314 439 1.8E-5 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 SUPERFAMILY SSF56784 295 315 9.43E-42 T 09-03-2017 IPR023214 HAD-like domain LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 SUPERFAMILY SSF56784 394 637 9.43E-42 T 09-03-2017 IPR023214 HAD-like domain LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 Gene3D G3DSA:2.70.150.10 1 42 5.8E-30 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 Gene3D G3DSA:2.70.150.10 94 192 5.8E-30 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 299 305 - T 09-03-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 145 159 4.7E-23 T 09-03-2017 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 297 311 4.7E-23 T 09-03-2017 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 436 447 4.7E-23 T 09-03-2017 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 557 569 4.7E-23 T 09-03-2017 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 458 468 4.7E-23 T 09-03-2017 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 553 4.7E-23 T 09-03-2017 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 Gene3D G3DSA:1.20.1110.10 48 93 2.7E-47 T 09-03-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 LS838_RS03615 860898f4ff607215e9a0fe9aef2f53d8 802 Gene3D G3DSA:1.20.1110.10 503 760 2.7E-47 T 09-03-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 LS838_RS08970 274f72ff8d7793eda92069ddb34b37fb 180 SMART SM00072 2 179 9.5E-6 T 09-03-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LS838_RS08970 274f72ff8d7793eda92069ddb34b37fb 180 Pfam PF00625 Guanylate kinase 4 177 3.0E-18 T 09-03-2017 IPR008145 Guanylate kinase/L-type calcium channel beta subunit LS838_RS08970 274f72ff8d7793eda92069ddb34b37fb 180 Gene3D G3DSA:3.30.63.10 44 78 1.1E-11 T 09-03-2017 LS838_RS08970 274f72ff8d7793eda92069ddb34b37fb 180 Gene3D G3DSA:3.40.50.300 3 43 2.0E-4 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08970 274f72ff8d7793eda92069ddb34b37fb 180 Gene3D G3DSA:3.40.50.300 79 177 6.5E-19 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08970 274f72ff8d7793eda92069ddb34b37fb 180 SUPERFAMILY SSF52540 4 179 2.55E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 3 373 33.408 T 09-03-2017 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 Gene3D G3DSA:1.10.601.10 18 209 1.4E-73 T 09-03-2017 LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 Pfam PF04542 Sigma-70 region 2 142 209 3.7E-21 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 333 359 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 136 372 7.9E-124 T 09-03-2017 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 Gene3D G3DSA:1.10.10.10 213 264 5.7E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 PRINTS PR00046 Major sigma-70 factor signature 188 196 4.0E-32 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 PRINTS PR00046 Major sigma-70 factor signature 348 359 4.0E-32 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 PRINTS PR00046 Major sigma-70 factor signature 333 348 4.0E-32 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 PRINTS PR00046 Major sigma-70 factor signature 164 177 4.0E-32 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 PRINTS PR00046 Major sigma-70 factor signature 312 324 4.0E-32 T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 SUPERFAMILY SSF88659 270 371 5.42E-31 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 Gene3D G3DSA:1.10.10.10 303 373 6.7E-35 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 Pfam PF00140 Sigma-70 factor, region 1.2 102 135 6.5E-16 T 09-03-2017 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 SUPERFAMILY SSF88946 101 210 2.49E-52 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 Pfam PF03979 Sigma-70 factor, region 1.1 18 88 3.6E-5 T 09-03-2017 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 Pfam PF04545 Sigma-70, region 4 308 361 1.2E-20 T 09-03-2017 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 136 361 3.6E-41 T 09-03-2017 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 Pfam PF04539 Sigma-70 region 3 219 295 8.3E-32 T 09-03-2017 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 SUPERFAMILY SSF88659 213 286 3.49E-22 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS05565 585ef3bc9c2ca56bd83aa59026577ebf 373 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 164 177 - T 09-03-2017 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS07500 55955feca1b25b95e48693ddbee00889 232 Pfam PF00005 ABC transporter 19 154 2.8E-23 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS07500 55955feca1b25b95e48693ddbee00889 232 SMART SM00382 28 203 1.3E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS07500 55955feca1b25b95e48693ddbee00889 232 SUPERFAMILY SSF52540 4 219 2.57E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07500 55955feca1b25b95e48693ddbee00889 232 Gene3D G3DSA:3.40.50.300 3 219 9.6E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00735 02a589b0f8202739b5be732ade9c5b47 427 Gene3D G3DSA:2.30.42.10 329 425 6.2E-27 T 09-03-2017 IPR001478 PDZ domain GO:0005515 LS838_RS00735 02a589b0f8202739b5be732ade9c5b47 427 Pfam PF13180 PDZ domain 346 423 1.1E-21 T 09-03-2017 IPR001478 PDZ domain GO:0005515 LS838_RS00735 02a589b0f8202739b5be732ade9c5b47 427 Gene3D G3DSA:2.40.10.10 143 219 6.9E-26 T 09-03-2017 LS838_RS00735 02a589b0f8202739b5be732ade9c5b47 427 Pfam PF13365 Trypsin-like peptidase domain 145 285 4.7E-29 T 09-03-2017 LS838_RS00735 02a589b0f8202739b5be732ade9c5b47 427 SUPERFAMILY SSF50494 89 323 5.93E-57 T 09-03-2017 IPR009003 Peptidase S1, PA clan LS838_RS00735 02a589b0f8202739b5be732ade9c5b47 427 SUPERFAMILY SSF50156 313 423 5.13E-23 T 09-03-2017 IPR001478 PDZ domain GO:0005515 LS838_RS00735 02a589b0f8202739b5be732ade9c5b47 427 PRINTS PR00834 HtrA/DegQ protease family signature 178 198 7.4E-37 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LS838_RS00735 02a589b0f8202739b5be732ade9c5b47 427 PRINTS PR00834 HtrA/DegQ protease family signature 256 273 7.4E-37 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LS838_RS00735 02a589b0f8202739b5be732ade9c5b47 427 PRINTS PR00834 HtrA/DegQ protease family signature 157 169 7.4E-37 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LS838_RS00735 02a589b0f8202739b5be732ade9c5b47 427 PRINTS PR00834 HtrA/DegQ protease family signature 219 243 7.4E-37 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LS838_RS00735 02a589b0f8202739b5be732ade9c5b47 427 PRINTS PR00834 HtrA/DegQ protease family signature 372 384 7.4E-37 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LS838_RS00735 02a589b0f8202739b5be732ade9c5b47 427 PRINTS PR00834 HtrA/DegQ protease family signature 278 295 7.4E-37 T 09-03-2017 IPR001940 Peptidase S1C GO:0004252|GO:0006508 LS838_RS00735 02a589b0f8202739b5be732ade9c5b47 427 Gene3D G3DSA:2.40.10.10 220 328 1.3E-42 T 09-03-2017 LS838_RS00735 02a589b0f8202739b5be732ade9c5b47 427 SMART SM00228 345 414 1.2E-14 T 09-03-2017 IPR001478 PDZ domain GO:0005515 LS838_RS02280 c7a25c04e9157a2f832f30a4ce1e65cf 161 Gene3D G3DSA:3.30.70.920 59 148 3.0E-13 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LS838_RS02280 c7a25c04e9157a2f832f30a4ce1e65cf 161 Pfam PF13404 AsnC-type helix-turn-helix domain 6 47 3.4E-14 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LS838_RS02280 c7a25c04e9157a2f832f30a4ce1e65cf 161 Gene3D G3DSA:1.10.10.10 2 57 1.1E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS02280 c7a25c04e9157a2f832f30a4ce1e65cf 161 SUPERFAMILY SSF46785 4 66 7.56E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS02280 c7a25c04e9157a2f832f30a4ce1e65cf 161 Pfam PF01037 Lrp/AsnC ligand binding domain 73 139 6.0E-10 T 09-03-2017 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain LS838_RS02280 c7a25c04e9157a2f832f30a4ce1e65cf 161 SMART SM00344 6 112 2.8E-25 T 09-03-2017 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 LS838_RS02280 c7a25c04e9157a2f832f30a4ce1e65cf 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 3.4E-6 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LS838_RS02280 c7a25c04e9157a2f832f30a4ce1e65cf 161 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 3.4E-6 T 09-03-2017 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 LS838_RS02280 c7a25c04e9157a2f832f30a4ce1e65cf 161 SUPERFAMILY SSF54909 69 142 2.15E-14 T 09-03-2017 IPR011008 Dimeric alpha-beta barrel LS838_RS01080 861882fc85d757c58b6b652aac9dbea3 313 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 46 300 1.9E-62 T 09-03-2017 LS838_RS01080 861882fc85d757c58b6b652aac9dbea3 313 Gene3D G3DSA:3.40.190.10 143 262 1.3E-18 T 09-03-2017 LS838_RS01080 861882fc85d757c58b6b652aac9dbea3 313 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 4 272 7.7E-72 T 09-03-2017 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 LS838_RS01080 861882fc85d757c58b6b652aac9dbea3 313 SMART SM00062 44 290 2.7E-4 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LS838_RS01080 861882fc85d757c58b6b652aac9dbea3 313 SUPERFAMILY SSF53850 42 310 9.28E-51 T 09-03-2017 LS838_RS04575 b2ce7d03c2cfd20889a2acc1ec50cec2 559 Gene3D G3DSA:3.40.50.300 15 131 1.5E-129 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04575 b2ce7d03c2cfd20889a2acc1ec50cec2 559 Gene3D G3DSA:3.40.50.300 251 444 1.5E-129 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04575 b2ce7d03c2cfd20889a2acc1ec50cec2 559 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 2 559 44.337 T 09-03-2017 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 LS838_RS04575 b2ce7d03c2cfd20889a2acc1ec50cec2 559 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 106 116 - T 09-03-2017 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 LS838_RS04575 b2ce7d03c2cfd20889a2acc1ec50cec2 559 Gene3D G3DSA:3.10.410.10 447 535 9.8E-33 T 09-03-2017 LS838_RS04575 b2ce7d03c2cfd20889a2acc1ec50cec2 559 Pfam PF01268 Formate--tetrahydrofolate ligase 3 559 5.0E-237 T 09-03-2017 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 LS838_RS04575 b2ce7d03c2cfd20889a2acc1ec50cec2 559 Gene3D G3DSA:3.30.1510.10 132 250 6.3E-44 T 09-03-2017 LS838_RS04575 b2ce7d03c2cfd20889a2acc1ec50cec2 559 SUPERFAMILY SSF52540 5 557 9.16E-216 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09825 4c6d51b6dd31a80b94a4bfc8d49f3d73 217 SUPERFAMILY SSF52540 4 214 6.85E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09825 4c6d51b6dd31a80b94a4bfc8d49f3d73 217 Pfam PF00005 ABC transporter 21 168 8.5E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS09825 4c6d51b6dd31a80b94a4bfc8d49f3d73 217 SMART SM00382 29 217 1.1E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS09825 4c6d51b6dd31a80b94a4bfc8d49f3d73 217 Gene3D G3DSA:3.40.50.300 3 214 8.1E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04935 2d754c6768774729441b94e3d1a85586 316 Gene3D G3DSA:3.40.50.720 1 117 2.1E-30 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS04935 2d754c6768774729441b94e3d1a85586 316 SUPERFAMILY SSF51735 106 285 1.78E-53 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS04935 2d754c6768774729441b94e3d1a85586 316 Gene3D G3DSA:3.40.50.720 118 287 3.1E-62 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS04935 2d754c6768774729441b94e3d1a85586 316 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 12 311 1.5E-25 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LS838_RS04935 2d754c6768774729441b94e3d1a85586 316 SUPERFAMILY SSF52283 10 129 1.57E-26 T 09-03-2017 LS838_RS04935 2d754c6768774729441b94e3d1a85586 316 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 09-03-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LS838_RS04935 2d754c6768774729441b94e3d1a85586 316 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 285 6.8E-59 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LS838_RS04935 2d754c6768774729441b94e3d1a85586 316 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 Gene3D G3DSA:3.10.20.30 5 65 8.5E-20 T 09-03-2017 IPR012675 Beta-grasp domain LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 SMART SM00863 166 215 5.4E-13 T 09-03-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 Gene3D G3DSA:3.30.980.10 184 219 9.0E-27 T 09-03-2017 LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 Gene3D G3DSA:3.30.980.10 67 130 9.0E-27 T 09-03-2017 LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 638 31.391 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 Gene3D G3DSA:3.40.50.800 534 640 4.6E-33 T 09-03-2017 IPR004154 Anticodon-binding LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 166 214 2.8E-7 T 09-03-2017 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 Gene3D G3DSA:3.30.54.20 134 177 4.4E-5 T 09-03-2017 LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 74 635 8.6E-201 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 SUPERFAMILY SSF81271 5 62 1.61E-14 T 09-03-2017 IPR012676 TGS-like KEGG: 00970+6.1.1.3 LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 SUPERFAMILY SSF55186 65 237 2.75E-38 T 09-03-2017 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 323 531 2.2E-32 T 09-03-2017 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 SUPERFAMILY SSF52954 532 637 8.16E-31 T 09-03-2017 IPR004154 Anticodon-binding LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 1.4E-47 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 467 495 1.4E-47 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 510 523 1.4E-47 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 537 549 1.4E-47 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 1.4E-47 T 09-03-2017 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 Gene3D G3DSA:3.30.930.10 238 533 3.6E-100 T 09-03-2017 LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 Pfam PF02824 TGS domain 6 62 1.6E-9 T 09-03-2017 IPR004095 TGS KEGG: 00970+6.1.1.3 LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 Pfam PF03129 Anticodon binding domain 544 634 2.7E-21 T 09-03-2017 IPR004154 Anticodon-binding LS838_RS06680 4dce9052821d1cfa77b8813a9fd6154d 643 SUPERFAMILY SSF55681 239 528 2.19E-94 T 09-03-2017 LS838_RS03060 927a2dfa734d64519b3c6ba4757109d7 293 PRINTS PR00690 Adhesin family signature 66 79 2.7E-9 T 09-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 LS838_RS03060 927a2dfa734d64519b3c6ba4757109d7 293 PRINTS PR00690 Adhesin family signature 34 52 2.7E-9 T 09-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 LS838_RS03060 927a2dfa734d64519b3c6ba4757109d7 293 PRINTS PR00690 Adhesin family signature 79 96 2.7E-9 T 09-03-2017 IPR006128 Adhesion lipoprotein GO:0007155 LS838_RS03060 927a2dfa734d64519b3c6ba4757109d7 293 Gene3D G3DSA:3.40.50.1980 16 165 8.7E-36 T 09-03-2017 LS838_RS03060 927a2dfa734d64519b3c6ba4757109d7 293 Gene3D G3DSA:3.40.50.1980 183 290 4.7E-14 T 09-03-2017 LS838_RS03060 927a2dfa734d64519b3c6ba4757109d7 293 PRINTS PR00691 Adhesin B signature 34 55 1.8E-5 T 09-03-2017 IPR006129 Adhesin B GO:0007155 LS838_RS03060 927a2dfa734d64519b3c6ba4757109d7 293 PRINTS PR00691 Adhesin B signature 257 274 1.8E-5 T 09-03-2017 IPR006129 Adhesin B GO:0007155 LS838_RS03060 927a2dfa734d64519b3c6ba4757109d7 293 PRINTS PR00691 Adhesin B signature 79 98 1.8E-5 T 09-03-2017 IPR006129 Adhesin B GO:0007155 LS838_RS03060 927a2dfa734d64519b3c6ba4757109d7 293 SUPERFAMILY SSF53807 19 290 1.23E-58 T 09-03-2017 LS838_RS03060 927a2dfa734d64519b3c6ba4757109d7 293 Pfam PF01297 Zinc-uptake complex component A periplasmic 37 290 5.1E-44 T 09-03-2017 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 LS838_RS06340 27defee0c5b6dbb102995f79a4d896a4 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 276 4.8E-48 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LS838_RS04985 c82df91c1a32d1f1f64db5d959a859be 392 Pfam PF07282 Putative transposase DNA-binding domain 318 386 5.4E-26 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS04985 c82df91c1a32d1f1f64db5d959a859be 392 Pfam PF01385 Probable transposase 180 304 2.6E-16 T 09-03-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 LS838_RS04985 c82df91c1a32d1f1f64db5d959a859be 392 Pfam PF12323 Helix-turn-helix domain 15 56 1.1E-11 T 09-03-2017 IPR021027 Transposase, putative, helix-turn-helix domain LS838_RS04985 c82df91c1a32d1f1f64db5d959a859be 392 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 272 345 1.9E-21 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS09845 48d8eb4eb06ecb9ad8a243bdbd63e92e 485 SMART SM00079 35 259 5.3E-5 T 09-03-2017 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LS838_RS09845 48d8eb4eb06ecb9ad8a243bdbd63e92e 485 SMART SM00062 35 260 1.3E-53 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LS838_RS09845 48d8eb4eb06ecb9ad8a243bdbd63e92e 485 Gene3D G3DSA:1.10.3720.10 278 484 1.6E-49 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS09845 48d8eb4eb06ecb9ad8a243bdbd63e92e 485 SUPERFAMILY SSF53850 14 258 7.59E-64 T 09-03-2017 LS838_RS09845 48d8eb4eb06ecb9ad8a243bdbd63e92e 485 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 302 484 9.5E-20 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS09845 48d8eb4eb06ecb9ad8a243bdbd63e92e 485 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 257 1.7E-54 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LS838_RS09845 48d8eb4eb06ecb9ad8a243bdbd63e92e 485 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 281 378 5.2E-25 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LS838_RS09845 48d8eb4eb06ecb9ad8a243bdbd63e92e 485 Gene3D G3DSA:3.40.190.10 219 260 1.2E-34 T 09-03-2017 LS838_RS09845 48d8eb4eb06ecb9ad8a243bdbd63e92e 485 Gene3D G3DSA:3.40.190.10 32 116 1.2E-34 T 09-03-2017 LS838_RS09845 48d8eb4eb06ecb9ad8a243bdbd63e92e 485 Gene3D G3DSA:3.40.190.10 117 218 7.7E-29 T 09-03-2017 LS838_RS09845 48d8eb4eb06ecb9ad8a243bdbd63e92e 485 SUPERFAMILY SSF161098 282 472 5.49E-42 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS01730 7f2c1b8d95229d42ff3e789e41559870 219 Gene3D G3DSA:3.40.50.1390 65 184 1.5E-18 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS01730 7f2c1b8d95229d42ff3e789e41559870 219 Gene3D G3DSA:1.10.1660.10 2 50 1.2E-12 T 09-03-2017 LS838_RS01730 7f2c1b8d95229d42ff3e789e41559870 219 Pfam PF00376 MerR family regulatory protein 6 42 3.3E-12 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS01730 7f2c1b8d95229d42ff3e789e41559870 219 SUPERFAMILY SSF53041 65 198 2.88E-22 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS01730 7f2c1b8d95229d42ff3e789e41559870 219 SMART SM00422 5 67 2.3E-7 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS01730 7f2c1b8d95229d42ff3e789e41559870 219 Pfam PF00239 Resolvase, N terminal domain 66 196 8.6E-21 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS01730 7f2c1b8d95229d42ff3e789e41559870 219 SUPERFAMILY SSF46955 4 51 1.01E-11 T 09-03-2017 IPR009061 Putative DNA-binding domain LS838_RS01730 7f2c1b8d95229d42ff3e789e41559870 219 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS01730 7f2c1b8d95229d42ff3e789e41559870 219 SMART SM00857 65 205 4.4E-22 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS01730 7f2c1b8d95229d42ff3e789e41559870 219 ProSitePatterns PS00397 Site-specific recombinases active site. 68 76 - T 09-03-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 LS838_RS05040 8b8609b218f2762b9e03bc4d54e13f86 301 TIGRFAM TIGR01250 pro_imino_pep_2: proline-specific peptidase 4 289 3.2E-119 T 09-03-2017 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LS838_RS05040 8b8609b218f2762b9e03bc4d54e13f86 301 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 55 66 7.6E-11 T 09-03-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LS838_RS05040 8b8609b218f2762b9e03bc4d54e13f86 301 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 27 35 7.6E-11 T 09-03-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LS838_RS05040 8b8609b218f2762b9e03bc4d54e13f86 301 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 103 117 7.6E-11 T 09-03-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LS838_RS05040 8b8609b218f2762b9e03bc4d54e13f86 301 Gene3D G3DSA:3.40.50.1820 5 290 1.3E-50 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS05040 8b8609b218f2762b9e03bc4d54e13f86 301 PIRSF PIRSF005539 1 298 5.6E-99 T 09-03-2017 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LS838_RS05040 8b8609b218f2762b9e03bc4d54e13f86 301 SUPERFAMILY SSF53474 9 289 2.13E-56 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS05040 8b8609b218f2762b9e03bc4d54e13f86 301 Pfam PF00561 alpha/beta hydrolase fold 27 141 9.2E-18 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 LS838_RS02225 4bdc36997a08991070a5300c5707e314 75 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 09-03-2017 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 LS838_RS02225 4bdc36997a08991070a5300c5707e314 75 SUPERFAMILY SSF55008 1 70 8.51E-15 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 LS838_RS02225 4bdc36997a08991070a5300c5707e314 75 Gene3D G3DSA:3.30.70.100 3 69 1.5E-16 T 09-03-2017 LS838_RS02225 4bdc36997a08991070a5300c5707e314 75 Pfam PF00403 Heavy-metal-associated domain 6 68 1.1E-11 T 09-03-2017 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 LS838_RS05440 790ce339322631c4ce847e94c3c8d37b 317 SMART SM00342 60 142 1.2E-12 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LS838_RS05440 790ce339322631c4ce847e94c3c8d37b 317 Pfam PF02805 Metal binding domain of Ada 5 43 3.5E-12 T 09-03-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 LS838_RS05440 790ce339322631c4ce847e94c3c8d37b 317 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 282 288 - T 09-03-2017 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 LS838_RS05440 790ce339322631c4ce847e94c3c8d37b 317 Pfam PF12833 Helix-turn-helix domain 68 143 2.0E-17 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LS838_RS05440 790ce339322631c4ce847e94c3c8d37b 317 SUPERFAMILY SSF53155 150 237 1.67E-15 T 09-03-2017 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 LS838_RS05440 790ce339322631c4ce847e94c3c8d37b 317 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 232 311 1.1E-32 T 09-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 LS838_RS05440 790ce339322631c4ce847e94c3c8d37b 317 Gene3D G3DSA:1.10.10.60 95 144 2.4E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS05440 790ce339322631c4ce847e94c3c8d37b 317 Gene3D G3DSA:3.40.10.10 1 40 8.3E-14 T 09-03-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 LS838_RS05440 790ce339322631c4ce847e94c3c8d37b 317 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 97 138 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LS838_RS05440 790ce339322631c4ce847e94c3c8d37b 317 SUPERFAMILY SSF46689 96 147 4.93E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS05440 790ce339322631c4ce847e94c3c8d37b 317 SUPERFAMILY SSF46767 231 312 1.83E-29 T 09-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 LS838_RS05440 790ce339322631c4ce847e94c3c8d37b 317 SUPERFAMILY SSF57884 2 35 1.83E-11 T 09-03-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 LS838_RS05440 790ce339322631c4ce847e94c3c8d37b 317 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 234 312 8.6E-30 T 09-03-2017 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 LS838_RS05440 790ce339322631c4ce847e94c3c8d37b 317 Gene3D G3DSA:1.10.10.10 231 312 2.3E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS03570 b5992b4184921417e9161141b733de64 417 Pfam PF07724 AAA domain (Cdc48 subfamily) 108 305 4.4E-46 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LS838_RS03570 b5992b4184921417e9161141b733de64 417 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 9 405 1.1E-190 T 09-03-2017 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 LS838_RS03570 b5992b4184921417e9161141b733de64 417 SUPERFAMILY SSF52540 60 395 4.06E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03570 b5992b4184921417e9161141b733de64 417 SMART SM01086 311 405 4.0E-33 T 09-03-2017 IPR019489 Clp ATPase, C-terminal LS838_RS03570 b5992b4184921417e9161141b733de64 417 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 3 409 49.828 T 09-03-2017 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 LS838_RS03570 b5992b4184921417e9161141b733de64 417 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 311 388 1.6E-16 T 09-03-2017 IPR019489 Clp ATPase, C-terminal LS838_RS03570 b5992b4184921417e9161141b733de64 417 Pfam PF06689 ClpX C4-type zinc finger 12 48 2.8E-16 T 09-03-2017 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 LS838_RS03570 b5992b4184921417e9161141b733de64 417 Gene3D G3DSA:1.10.8.60 311 412 3.0E-36 T 09-03-2017 LS838_RS03570 b5992b4184921417e9161141b733de64 417 Gene3D G3DSA:3.40.50.300 63 250 1.4E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03570 b5992b4184921417e9161141b733de64 417 Gene3D G3DSA:3.40.50.300 288 305 1.4E-50 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03570 b5992b4184921417e9161141b733de64 417 SMART SM00382 108 258 8.2E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS03570 b5992b4184921417e9161141b733de64 417 SMART SM00994 10 49 3.7E-16 T 09-03-2017 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 LS838_RS03570 b5992b4184921417e9161141b733de64 417 SUPERFAMILY SSF57716 11 46 5.42E-9 T 09-03-2017 LS838_RS07975 743485706252ca12f3d3b570fda82494 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 252 4.5E-63 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LS838_RS07975 743485706252ca12f3d3b570fda82494 329 Gene3D G3DSA:3.40.50.720 1 169 1.1E-54 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS07975 743485706252ca12f3d3b570fda82494 329 SUPERFAMILY SSF51735 1 326 1.03E-100 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS07975 743485706252ca12f3d3b570fda82494 329 Gene3D G3DSA:3.90.25.10 170 222 3.2E-44 T 09-03-2017 LS838_RS07975 743485706252ca12f3d3b570fda82494 329 Gene3D G3DSA:3.90.25.10 254 328 3.2E-44 T 09-03-2017 LS838_RS07975 743485706252ca12f3d3b570fda82494 329 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 326 1.0E-129 T 09-03-2017 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 LS838_RS02820 799cdd5c78f79f75d04b8b79dd50b680 680 SUPERFAMILY SSF52540 474 598 2.24E-38 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02820 799cdd5c78f79f75d04b8b79dd50b680 680 SUPERFAMILY SSF52540 38 85 2.24E-38 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02820 799cdd5c78f79f75d04b8b79dd50b680 680 SMART SM00490 464 550 6.6E-18 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS02820 799cdd5c78f79f75d04b8b79dd50b680 680 Pfam PF12344 Ultra-violet resistance protein B 556 598 1.6E-24 T 09-03-2017 IPR024759 UvrB, YAD/RRR-motif-containing domain LS838_RS02820 799cdd5c78f79f75d04b8b79dd50b680 680 Pfam PF00271 Helicase conserved C-terminal domain 439 549 1.7E-18 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS02820 799cdd5c78f79f75d04b8b79dd50b680 680 Gene3D G3DSA:4.10.860.10 621 663 1.3E-12 T 09-03-2017 IPR001943 UVR domain GO:0005515 LS838_RS02820 799cdd5c78f79f75d04b8b79dd50b680 680 Gene3D G3DSA:3.30.2060.10 164 235 1.1E-11 T 09-03-2017 LS838_RS02820 799cdd5c78f79f75d04b8b79dd50b680 680 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 9 662 0.0 T 09-03-2017 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 LS838_RS02820 799cdd5c78f79f75d04b8b79dd50b680 680 Gene3D G3DSA:3.40.50.300 393 414 1.3E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02820 799cdd5c78f79f75d04b8b79dd50b680 680 Gene3D G3DSA:3.40.50.300 10 94 1.3E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02820 799cdd5c78f79f75d04b8b79dd50b680 680 Gene3D G3DSA:3.40.50.300 283 343 1.3E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02820 799cdd5c78f79f75d04b8b79dd50b680 680 Hamap MF_00204 UvrABC system protein B [uvrB]. 8 665 43.512 T 09-03-2017 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 LS838_RS02820 799cdd5c78f79f75d04b8b79dd50b680 680 SUPERFAMILY SSF52540 8 419 1.47E-137 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02820 799cdd5c78f79f75d04b8b79dd50b680 680 SMART SM00487 14 430 2.5E-28 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LS838_RS02820 799cdd5c78f79f75d04b8b79dd50b680 680 SUPERFAMILY SSF46600 624 664 5.23E-10 T 09-03-2017 IPR001943 UVR domain GO:0005515 LS838_RS02820 799cdd5c78f79f75d04b8b79dd50b680 680 Pfam PF02151 UvrB/uvrC motif 630 663 3.3E-8 T 09-03-2017 IPR001943 UVR domain GO:0005515 LS838_RS02820 799cdd5c78f79f75d04b8b79dd50b680 680 Gene3D G3DSA:3.40.50.300 423 586 3.6E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02820 799cdd5c78f79f75d04b8b79dd50b680 680 Pfam PF04851 Type III restriction enzyme, res subunit 21 143 1.1E-14 T 09-03-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 LS838_RS02440 f0128228d11e714b90c6ae078f40c861 311 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 300 2.8E-56 T 09-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LS838_RS02440 f0128228d11e714b90c6ae078f40c861 311 Gene3D G3DSA:3.90.245.10 1 309 5.9E-82 T 09-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LS838_RS02440 f0128228d11e714b90c6ae078f40c861 311 SUPERFAMILY SSF53590 3 308 3.66E-80 T 09-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LS838_RS01155 2631f8c6ac517bb8637995c0873ab6c9 650 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 559 570 1.6E-20 T 09-03-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 LS838_RS01155 2631f8c6ac517bb8637995c0873ab6c9 650 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 489 505 1.6E-20 T 09-03-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 LS838_RS01155 2631f8c6ac517bb8637995c0873ab6c9 650 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 450 462 1.6E-20 T 09-03-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 LS838_RS01155 2631f8c6ac517bb8637995c0873ab6c9 650 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 468 480 1.6E-20 T 09-03-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 LS838_RS01155 2631f8c6ac517bb8637995c0873ab6c9 650 SUPERFAMILY SSF55486 13 650 2.93E-190 T 09-03-2017 LS838_RS01155 2631f8c6ac517bb8637995c0873ab6c9 650 Gene3D G3DSA:3.40.390.10 285 404 2.2E-79 T 09-03-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 LS838_RS01155 2631f8c6ac517bb8637995c0873ab6c9 650 Gene3D G3DSA:3.40.390.10 449 650 2.2E-79 T 09-03-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 LS838_RS01155 2631f8c6ac517bb8637995c0873ab6c9 650 Pfam PF01431 Peptidase family M13 458 647 2.4E-54 T 09-03-2017 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 LS838_RS01155 2631f8c6ac517bb8637995c0873ab6c9 650 Pfam PF05649 Peptidase family M13 23 401 1.0E-71 T 09-03-2017 IPR008753 Peptidase M13, N-terminal domain GO:0006508 LS838_RS09545 eac0c276903eccde5a039084720a9c98 208 SUPERFAMILY SSF46689 4 80 2.87E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS09545 eac0c276903eccde5a039084720a9c98 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 4.7E-5 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LS838_RS09545 eac0c276903eccde5a039084720a9c98 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 4.7E-5 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LS838_RS09545 eac0c276903eccde5a039084720a9c98 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 60 1.0E-11 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LS838_RS09545 eac0c276903eccde5a039084720a9c98 208 Gene3D G3DSA:1.10.357.10 12 203 1.4E-24 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LS838_RS01585 8fd7a8ce08bb189a8dab950dc74edba5 296 SMART SM00650 38 221 8.4E-73 T 09-03-2017 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 LS838_RS01585 8fd7a8ce08bb189a8dab950dc74edba5 296 Pfam PF00398 Ribosomal RNA adenine dimethylase 24 292 3.2E-60 T 09-03-2017 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm LS838_RS01585 8fd7a8ce08bb189a8dab950dc74edba5 296 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 23 290 4.6E-81 T 09-03-2017 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 LS838_RS01585 8fd7a8ce08bb189a8dab950dc74edba5 296 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 54 81 - T 09-03-2017 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 LS838_RS01585 8fd7a8ce08bb189a8dab950dc74edba5 296 Gene3D G3DSA:3.40.50.150 11 222 4.8E-64 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS01585 8fd7a8ce08bb189a8dab950dc74edba5 296 Gene3D G3DSA:1.10.8.100 225 293 8.7E-22 T 09-03-2017 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201 LS838_RS01585 8fd7a8ce08bb189a8dab950dc74edba5 296 SUPERFAMILY SSF53335 19 293 1.8E-69 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS01585 8fd7a8ce08bb189a8dab950dc74edba5 296 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 22 292 52.263 T 09-03-2017 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 LS838_RS05005 fb9528a93b8e97dc2d4936cd38f1a62b 1250 SUPERFAMILY SSF52540 960 1042 1.12E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05005 fb9528a93b8e97dc2d4936cd38f1a62b 1250 SUPERFAMILY SSF52540 1082 1203 1.12E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05005 fb9528a93b8e97dc2d4936cd38f1a62b 1250 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1112 1194 2.3E-7 T 09-03-2017 LS838_RS05005 fb9528a93b8e97dc2d4936cd38f1a62b 1250 Gene3D G3DSA:3.40.1140.10 1142 1204 3.4E-13 T 09-03-2017 LS838_RS05005 fb9528a93b8e97dc2d4936cd38f1a62b 1250 Gene3D G3DSA:3.40.1140.10 5 84 3.4E-13 T 09-03-2017 LS838_RS05005 fb9528a93b8e97dc2d4936cd38f1a62b 1250 SUPERFAMILY SSF52540 10 161 1.48E-11 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05005 fb9528a93b8e97dc2d4936cd38f1a62b 1250 SUPERFAMILY SSF52540 1130 1203 1.48E-11 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06090 db4f0b14a5e473a620d8c0b53b4ac7a3 113 Gene3D G3DSA:1.10.10.10 2 102 3.1E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS06090 db4f0b14a5e473a620d8c0b53b4ac7a3 113 SUPERFAMILY SSF88659 6 106 1.12E-24 T 09-03-2017 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS06090 db4f0b14a5e473a620d8c0b53b4ac7a3 113 Hamap MF_00245 UPF0122 protein . 4 110 17.233 T 09-03-2017 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like LS838_RS06090 db4f0b14a5e473a620d8c0b53b4ac7a3 113 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 6 94 8.8E-26 T 09-03-2017 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 541 785 1.0E-43 T 09-03-2017 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 SMART SM00940 1 156 2.7E-74 T 09-03-2017 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 SUPERFAMILY SSF49785 582 790 8.5E-62 T 09-03-2017 IPR008979 Galactose-binding domain-like LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 SUPERFAMILY SSF81761 1 158 4.05E-42 T 09-03-2017 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 SMART SM00939 529 788 7.2E-63 T 09-03-2017 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 Gene3D G3DSA:3.40.50.1820 454 558 1.2E-53 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 Gene3D G3DSA:3.40.50.1820 283 397 1.2E-53 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 Gene3D G3DSA:3.40.50.1820 157 245 1.2E-53 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 Pfam PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal 1 156 4.4E-48 T 09-03-2017 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 201 515 1.0E-75 T 09-03-2017 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 SUPERFAMILY SSF53474 165 567 6.35E-85 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 219 235 1.4E-53 T 09-03-2017 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 386 402 1.4E-53 T 09-03-2017 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 756 771 1.4E-53 T 09-03-2017 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 184 194 1.4E-53 T 09-03-2017 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 168 180 1.4E-53 T 09-03-2017 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 202 211 1.4E-53 T 09-03-2017 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 521 537 1.4E-53 T 09-03-2017 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 Hamap MF_00698 Xaa-Pro dipeptidyl-peptidase [pepX]. 1 791 31.492 T 09-03-2017 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 Gene3D G3DSA:2.60.120.260 559 671 1.8E-56 T 09-03-2017 IPR008979 Galactose-binding domain-like LS838_RS06445 ce53746e734f80ba3c53e9cfc6b34b53 792 Gene3D G3DSA:2.60.120.260 711 789 1.8E-56 T 09-03-2017 IPR008979 Galactose-binding domain-like LS838_RS08825 e1d45dbda285ffb2427dd5053e006363 346 Pfam PF13289 SIR2-like domain 133 285 5.1E-15 T 09-03-2017 LS838_RS08825 e1d45dbda285ffb2427dd5053e006363 346 SUPERFAMILY SSF52467 130 146 7.19E-5 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain LS838_RS08825 e1d45dbda285ffb2427dd5053e006363 346 SUPERFAMILY SSF52467 191 288 7.19E-5 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain LS838_RS00005 f0086a1868b74f9699c366706a14e653 454 ProSitePatterns PS01008 DnaA protein signature. 412 431 - T 09-03-2017 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 LS838_RS00005 f0086a1868b74f9699c366706a14e653 454 SMART SM00760 362 431 1.6E-41 T 09-03-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 LS838_RS00005 f0086a1868b74f9699c366706a14e653 454 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 151 171 8.7E-50 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like LS838_RS00005 f0086a1868b74f9699c366706a14e653 454 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 215 229 8.7E-50 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like LS838_RS00005 f0086a1868b74f9699c366706a14e653 454 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 412 431 8.7E-50 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like LS838_RS00005 f0086a1868b74f9699c366706a14e653 454 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 183 197 8.7E-50 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like LS838_RS00005 f0086a1868b74f9699c366706a14e653 454 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 249 276 8.7E-50 T 09-03-2017 IPR020591 Chromosomal replication control, initiator DnaA-like LS838_RS00005 f0086a1868b74f9699c366706a14e653 454 SUPERFAMILY SSF48295 350 453 3.66E-36 T 09-03-2017 IPR010921 Trp repressor/replication initiator GO:0043565 LS838_RS00005 f0086a1868b74f9699c366706a14e653 454 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 8 452 1.4E-170 T 09-03-2017 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 LS838_RS00005 f0086a1868b74f9699c366706a14e653 454 Gene3D G3DSA:1.10.1750.10 355 453 6.6E-40 T 09-03-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 LS838_RS00005 f0086a1868b74f9699c366706a14e653 454 Gene3D G3DSA:3.40.50.300 104 282 1.1E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00005 f0086a1868b74f9699c366706a14e653 454 SMART SM00382 150 279 2.3E-7 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS00005 f0086a1868b74f9699c366706a14e653 454 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 363 431 1.5E-32 T 09-03-2017 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 LS838_RS00005 f0086a1868b74f9699c366706a14e653 454 Pfam PF00308 Bacterial dnaA protein 118 333 2.5E-93 T 09-03-2017 IPR013317 Chromosomal replication initiator protein DnaA LS838_RS00005 f0086a1868b74f9699c366706a14e653 454 Gene3D G3DSA:1.10.8.60 284 352 1.5E-26 T 09-03-2017 LS838_RS00005 f0086a1868b74f9699c366706a14e653 454 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 5 453 32.048 T 09-03-2017 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 LS838_RS00005 f0086a1868b74f9699c366706a14e653 454 Pfam PF11638 DnaA N-terminal domain 6 53 6.3E-6 T 09-03-2017 IPR024633 DnaA N-terminal domain LS838_RS00005 f0086a1868b74f9699c366706a14e653 454 SUPERFAMILY SSF52540 117 327 1.41E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09290 1ad7db0eef27acc15c1ec532e113821d 467 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 09-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 LS838_RS09290 1ad7db0eef27acc15c1ec532e113821d 467 Gene3D G3DSA:1.10.275.10 5 137 2.7E-44 T 09-03-2017 IPR024083 Fumarase/histidase, N-terminal LS838_RS09290 1ad7db0eef27acc15c1ec532e113821d 467 Pfam PF00206 Lyase 14 340 6.8E-92 T 09-03-2017 IPR022761 Fumarate lyase, N-terminal LS838_RS09290 1ad7db0eef27acc15c1ec532e113821d 467 Gene3D G3DSA:1.10.40.30 403 459 7.9E-22 T 09-03-2017 LS838_RS09290 1ad7db0eef27acc15c1ec532e113821d 467 PRINTS PR00145 Argininosuccinate lyase family signature 132 154 8.0E-7 T 09-03-2017 LS838_RS09290 1ad7db0eef27acc15c1ec532e113821d 467 PRINTS PR00145 Argininosuccinate lyase family signature 173 193 8.0E-7 T 09-03-2017 LS838_RS09290 1ad7db0eef27acc15c1ec532e113821d 467 PRINTS PR00145 Argininosuccinate lyase family signature 315 331 8.0E-7 T 09-03-2017 LS838_RS09290 1ad7db0eef27acc15c1ec532e113821d 467 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 1.2E-29 T 09-03-2017 IPR000362 Fumarate lyase family LS838_RS09290 1ad7db0eef27acc15c1ec532e113821d 467 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 1.2E-29 T 09-03-2017 IPR000362 Fumarate lyase family LS838_RS09290 1ad7db0eef27acc15c1ec532e113821d 467 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 1.2E-29 T 09-03-2017 IPR000362 Fumarate lyase family LS838_RS09290 1ad7db0eef27acc15c1ec532e113821d 467 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 1.2E-29 T 09-03-2017 IPR000362 Fumarate lyase family LS838_RS09290 1ad7db0eef27acc15c1ec532e113821d 467 Gene3D G3DSA:1.20.200.10 138 401 1.9E-90 T 09-03-2017 LS838_RS09290 1ad7db0eef27acc15c1ec532e113821d 467 Pfam PF10415 Fumarase C C-terminus 407 459 4.5E-20 T 09-03-2017 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 LS838_RS09290 1ad7db0eef27acc15c1ec532e113821d 467 Hamap MF_00743 Fumarate hydratase class II [fumC]. 6 460 71.193 T 09-03-2017 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 LS838_RS09290 1ad7db0eef27acc15c1ec532e113821d 467 SUPERFAMILY SSF48557 4 453 7.51E-132 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 LS838_RS05995 201dd34489683869b7fa138bcf409e01 144 Gene3D G3DSA:3.30.70.260 65 137 1.3E-5 T 09-03-2017 LS838_RS05995 201dd34489683869b7fa138bcf409e01 144 Pfam PF01842 ACT domain 68 133 1.6E-6 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 LS838_RS05995 201dd34489683869b7fa138bcf409e01 144 SUPERFAMILY SSF55021 66 137 1.96E-8 T 09-03-2017 LS838_RS05995 201dd34489683869b7fa138bcf409e01 144 PIRSF PIRSF025624 1 144 5.8E-39 T 09-03-2017 IPR008310 UPF0735 ACT domain-containing protein GO:0009094 LS838_RS05995 201dd34489683869b7fa138bcf409e01 144 Hamap MF_00707 UPF0735 ACT domain-containing protein . 1 144 28.425 T 09-03-2017 IPR008310 UPF0735 ACT domain-containing protein GO:0009094 LS838_RS01755 0c465bae9370a24bc42bc4a05b2fbb59 430 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 14 427 2.4E-144 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 LS838_RS01755 0c465bae9370a24bc42bc4a05b2fbb59 430 SUPERFAMILY SSF53383 12 428 1.73E-123 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase LS838_RS01755 0c465bae9370a24bc42bc4a05b2fbb59 430 PIRSF PIRSF001434 1 430 2.5E-131 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 LS838_RS01755 0c465bae9370a24bc42bc4a05b2fbb59 430 Gene3D G3DSA:3.90.1150.10 294 430 6.5E-51 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LS838_RS01755 0c465bae9370a24bc42bc4a05b2fbb59 430 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 205 219 - T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 LS838_RS01755 0c465bae9370a24bc42bc4a05b2fbb59 430 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 13 428 1.7E-189 T 09-03-2017 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 LS838_RS01755 0c465bae9370a24bc42bc4a05b2fbb59 430 Gene3D G3DSA:3.40.640.10 12 292 3.4E-113 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 SMART SM00958 226 350 3.6E-64 T 09-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 SUPERFAMILY SSF81886 584 798 1.2E-66 T 09-03-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 795 19.557 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 508 3.0E-240 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 PRINTS PR00906 SecA protein signature 405 418 9.0E-73 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 PRINTS PR00906 SecA protein signature 168 188 9.0E-73 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 PRINTS PR00906 SecA protein signature 368 385 9.0E-73 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 PRINTS PR00906 SecA protein signature 331 353 9.0E-73 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 PRINTS PR00906 SecA protein signature 61 85 9.0E-73 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 PRINTS PR00906 SecA protein signature 115 125 9.0E-73 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 PRINTS PR00906 SecA protein signature 99 113 9.0E-73 T 09-03-2017 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 Pfam PF07516 SecA Wing and Scaffold domain 582 792 1.3E-58 T 09-03-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 Pfam PF01043 SecA preprotein cross-linking domain 232 350 8.6E-37 T 09-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 ProSitePatterns PS01312 SecA family signature. 492 507 - T 09-03-2017 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 SUPERFAMILY SSF52540 4 226 1.43E-82 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 SUPERFAMILY SSF52540 360 407 1.43E-82 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 SUPERFAMILY SSF81767 225 360 8.63E-43 T 09-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 Gene3D G3DSA:3.40.50.300 409 579 6.0E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 Gene3D G3DSA:3.40.50.300 361 408 6.0E-122 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 Gene3D G3DSA:3.40.50.300 4 226 6.0E-122 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 Gene3D G3DSA:1.10.3060.10 612 794 5.4E-51 T 09-03-2017 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 SUPERFAMILY SSF52540 408 577 1.02E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 SMART SM00957 5 394 7.7E-283 T 09-03-2017 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 Pfam PF07517 SecA DEAD-like domain 8 394 2.9E-129 T 09-03-2017 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 LS838_RS02785 f4a7ae5e5aa79ac2152790bef5db94d8 800 Gene3D G3DSA:3.90.1440.10 229 360 8.2E-45 T 09-03-2017 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 LS838_RS04125 52873dad8bba76c7ea0895263dbc1935 460 Gene3D G3DSA:3.40.50.20 1 129 2.2E-50 T 09-03-2017 IPR016185 Pre-ATP-grasp domain LS838_RS04125 52873dad8bba76c7ea0895263dbc1935 460 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 7.9E-45 T 09-03-2017 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LS838_RS04125 52873dad8bba76c7ea0895263dbc1935 460 Gene3D G3DSA:3.30.470.20 204 446 1.4E-91 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LS838_RS04125 52873dad8bba76c7ea0895263dbc1935 460 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LS838_RS04125 52873dad8bba76c7ea0895263dbc1935 460 Gene3D G3DSA:3.30.1490.20 130 202 1.5E-26 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LS838_RS04125 52873dad8bba76c7ea0895263dbc1935 460 Pfam PF02785 Biotin carboxylase C-terminal domain 336 444 2.8E-37 T 09-03-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LS838_RS04125 52873dad8bba76c7ea0895263dbc1935 460 SUPERFAMILY SSF56059 115 326 1.61E-61 T 09-03-2017 LS838_RS04125 52873dad8bba76c7ea0895263dbc1935 460 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LS838_RS04125 52873dad8bba76c7ea0895263dbc1935 460 SMART SM00878 336 443 1.3E-52 T 09-03-2017 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LS838_RS04125 52873dad8bba76c7ea0895263dbc1935 460 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 3.7E-192 T 09-03-2017 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 LS838_RS04125 52873dad8bba76c7ea0895263dbc1935 460 SUPERFAMILY SSF52440 1 113 8.63E-48 T 09-03-2017 IPR016185 Pre-ATP-grasp domain LS838_RS04125 52873dad8bba76c7ea0895263dbc1935 460 SUPERFAMILY SSF51246 331 445 1.15E-38 T 09-03-2017 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LS838_RS04125 52873dad8bba76c7ea0895263dbc1935 460 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 4.4E-71 T 09-03-2017 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 LS838_RS06755 68806669d0290217530f8ed931348135 210 Gene3D G3DSA:1.10.10.60 156 204 8.8E-16 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS06755 68806669d0290217530f8ed931348135 210 SUPERFAMILY SSF46689 154 204 1.61E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS06755 68806669d0290217530f8ed931348135 210 Gene3D G3DSA:1.10.10.60 106 155 5.7E-4 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS06755 68806669d0290217530f8ed931348135 210 Pfam PF12833 Helix-turn-helix domain 125 202 1.5E-17 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LS838_RS06755 68806669d0290217530f8ed931348135 210 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 155 197 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LS838_RS06755 68806669d0290217530f8ed931348135 210 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 185 201 2.1E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LS838_RS06755 68806669d0290217530f8ed931348135 210 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 170 185 2.1E-5 T 09-03-2017 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 LS838_RS06755 68806669d0290217530f8ed931348135 210 SMART SM00342 118 201 2.6E-19 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LS838_RS02540 cf40946ac1d7002985a7876f4b26b499 380 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 364 1.5E-159 T 09-03-2017 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 LS838_RS02540 cf40946ac1d7002985a7876f4b26b499 380 Gene3D G3DSA:3.40.50.2000 206 364 4.5E-63 T 09-03-2017 LS838_RS02540 cf40946ac1d7002985a7876f4b26b499 380 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 29 364 8.2E-122 T 09-03-2017 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 LS838_RS02540 cf40946ac1d7002985a7876f4b26b499 380 SUPERFAMILY SSF53756 3 366 2.75E-137 T 09-03-2017 LS838_RS02540 cf40946ac1d7002985a7876f4b26b499 380 Gene3D G3DSA:3.40.50.2000 1 205 1.6E-88 T 09-03-2017 LS838_RS05100 df6e0a81d59da78ef7dc16291bf9d377 286 Pfam PF12698 ABC-2 family transporter protein 64 277 1.5E-18 T 09-03-2017 LS838_RS05100 df6e0a81d59da78ef7dc16291bf9d377 286 PIRSF PIRSF006648 1 284 2.1E-22 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LS838_RS05100 df6e0a81d59da78ef7dc16291bf9d377 286 PRINTS PR00164 ABC-2 type transport system membrane protein signature 141 165 3.3E-5 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LS838_RS05100 df6e0a81d59da78ef7dc16291bf9d377 286 PRINTS PR00164 ABC-2 type transport system membrane protein signature 198 217 3.3E-5 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LS838_RS05100 df6e0a81d59da78ef7dc16291bf9d377 286 PRINTS PR00164 ABC-2 type transport system membrane protein signature 178 197 3.3E-5 T 09-03-2017 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 LS838_RS02640 d871e13c8c357e0f2b76507c6a83faa6 575 SUPERFAMILY SSF51621 251 551 1.49E-112 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LS838_RS02640 d871e13c8c357e0f2b76507c6a83faa6 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 562 2.6E-229 T 09-03-2017 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 LS838_RS02640 d871e13c8c357e0f2b76507c6a83faa6 575 PIRSF PIRSF000732 1 575 3.5E-215 T 09-03-2017 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 LS838_RS02640 d871e13c8c357e0f2b76507c6a83faa6 575 Gene3D G3DSA:3.20.20.60 258 570 7.9E-114 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LS838_RS02640 d871e13c8c357e0f2b76507c6a83faa6 575 SUPERFAMILY SSF52009 127 247 8.76E-37 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LS838_RS02640 d871e13c8c357e0f2b76507c6a83faa6 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 128 1.6E-32 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LS838_RS02640 d871e13c8c357e0f2b76507c6a83faa6 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 295 314 2.2E-29 T 09-03-2017 LS838_RS02640 d871e13c8c357e0f2b76507c6a83faa6 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 502 514 2.2E-29 T 09-03-2017 LS838_RS02640 d871e13c8c357e0f2b76507c6a83faa6 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 466 481 2.2E-29 T 09-03-2017 LS838_RS02640 d871e13c8c357e0f2b76507c6a83faa6 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 449 464 2.2E-29 T 09-03-2017 LS838_RS02640 d871e13c8c357e0f2b76507c6a83faa6 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 449 467 - T 09-03-2017 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 LS838_RS02640 d871e13c8c357e0f2b76507c6a83faa6 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 155 227 2.6E-22 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LS838_RS02640 d871e13c8c357e0f2b76507c6a83faa6 575 Gene3D G3DSA:1.10.274.10 24 135 5.0E-40 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LS838_RS02640 d871e13c8c357e0f2b76507c6a83faa6 575 Gene3D G3DSA:3.50.30.10 136 257 1.1E-43 T 09-03-2017 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 LS838_RS02640 d871e13c8c357e0f2b76507c6a83faa6 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 542 4.5E-125 T 09-03-2017 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 LS838_RS02640 d871e13c8c357e0f2b76507c6a83faa6 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 186 197 - T 09-03-2017 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 LS838_RS02640 d871e13c8c357e0f2b76507c6a83faa6 575 SUPERFAMILY SSF47831 24 145 3.27E-34 T 09-03-2017 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 LS838_RS07875 3969ff950035b18ebb5198b4d3e0dda5 646 Gene3D G3DSA:3.30.1360.60 1 81 1.2E-23 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LS838_RS07875 3969ff950035b18ebb5198b4d3e0dda5 646 Gene3D G3DSA:2.70.70.10 495 644 6.7E-60 T 09-03-2017 LS838_RS07875 3969ff950035b18ebb5198b4d3e0dda5 646 Pfam PF02378 Phosphotransferase system, EIIC 111 400 3.9E-55 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LS838_RS07875 3969ff950035b18ebb5198b4d3e0dda5 646 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 561 573 - T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LS838_RS07875 3969ff950035b18ebb5198b4d3e0dda5 646 SUPERFAMILY SSF55604 7 81 3.14E-17 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LS838_RS07875 3969ff950035b18ebb5198b4d3e0dda5 646 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 499 619 1.4E-45 T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LS838_RS07875 3969ff950035b18ebb5198b4d3e0dda5 646 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 27 111 1.9E-17 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LS838_RS07875 3969ff950035b18ebb5198b4d3e0dda5 646 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 2 456 2.6E-184 T 09-03-2017 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 LS838_RS07875 3969ff950035b18ebb5198b4d3e0dda5 646 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 498 621 7.6E-50 T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LS838_RS07875 3969ff950035b18ebb5198b4d3e0dda5 646 Pfam PF00367 phosphotransferase system, EIIB 8 40 2.7E-11 T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LS838_RS07875 3969ff950035b18ebb5198b4d3e0dda5 646 SUPERFAMILY SSF51261 495 642 9.03E-54 T 09-03-2017 IPR011055 Duplicated hybrid motif LS838_RS07875 3969ff950035b18ebb5198b4d3e0dda5 646 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 18 35 - T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LS838_RS02400 f090babb183df57ffdd841f9c6bf0686 503 Pfam PF01966 HD domain 336 411 1.1E-4 T 09-03-2017 IPR006674 HD domain LS838_RS02400 f090babb183df57ffdd841f9c6bf0686 503 SUPERFAMILY SSF109604 316 498 1.26E-35 T 09-03-2017 LS838_RS02400 f090babb183df57ffdd841f9c6bf0686 503 Gene3D G3DSA:3.30.420.40 2 116 7.0E-5 T 09-03-2017 LS838_RS02400 f090babb183df57ffdd841f9c6bf0686 503 Gene3D G3DSA:1.10.3210.10 353 449 4.3E-6 T 09-03-2017 IPR006674 HD domain LS838_RS05760 c47a8b0efeb2118b73138387252c8ed2 590 SUPERFAMILY SSF52540 344 585 1.3E-82 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05760 c47a8b0efeb2118b73138387252c8ed2 590 SMART SM00382 376 567 5.4E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS05760 c47a8b0efeb2118b73138387252c8ed2 590 Pfam PF00005 ABC transporter 368 514 5.0E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS05760 c47a8b0efeb2118b73138387252c8ed2 590 Pfam PF00664 ABC transporter transmembrane region 28 300 3.0E-51 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS05760 c47a8b0efeb2118b73138387252c8ed2 590 SUPERFAMILY SSF90123 15 333 1.29E-77 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS05760 c47a8b0efeb2118b73138387252c8ed2 590 Gene3D G3DSA:1.20.1560.10 14 330 2.9E-76 T 09-03-2017 LS838_RS05760 c47a8b0efeb2118b73138387252c8ed2 590 Gene3D G3DSA:3.40.50.300 351 577 5.5E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01920 af1cfa003b79c79b51b6ff9710d0c087 170 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 170 34.383 T 09-03-2017 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 LS838_RS01920 af1cfa003b79c79b51b6ff9710d0c087 170 ProSitePatterns PS00585 Ribosomal protein S5 signature. 33 65 - T 09-03-2017 IPR018192 Ribosomal protein S5, N-terminal, conserved site LS838_RS01920 af1cfa003b79c79b51b6ff9710d0c087 170 SUPERFAMILY SSF54211 85 162 3.79E-24 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LS838_RS01920 af1cfa003b79c79b51b6ff9710d0c087 170 SUPERFAMILY SSF54768 13 80 6.8E-23 T 09-03-2017 LS838_RS01920 af1cfa003b79c79b51b6ff9710d0c087 170 Gene3D G3DSA:3.30.160.20 14 77 6.2E-30 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain LS838_RS01920 af1cfa003b79c79b51b6ff9710d0c087 170 Gene3D G3DSA:3.30.230.10 82 163 1.9E-29 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LS838_RS01920 af1cfa003b79c79b51b6ff9710d0c087 170 Pfam PF00333 Ribosomal protein S5, N-terminal domain 17 80 1.5E-28 T 09-03-2017 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 LS838_RS01920 af1cfa003b79c79b51b6ff9710d0c087 170 Pfam PF03719 Ribosomal protein S5, C-terminal domain 92 162 9.8E-27 T 09-03-2017 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 LS838_RS01920 af1cfa003b79c79b51b6ff9710d0c087 170 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 14 164 1.2E-63 T 09-03-2017 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 LS838_RS04215 cfe41c9e689096a77836608e4376ec28 530 SUPERFAMILY SSF56235 1 180 3.0E-45 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LS838_RS04215 cfe41c9e689096a77836608e4376ec28 530 Pfam PF13537 Glutamine amidotransferase domain 45 163 6.2E-32 T 09-03-2017 IPR017932 Glutamine amidotransferase type 2 domain LS838_RS04215 cfe41c9e689096a77836608e4376ec28 530 Gene3D G3DSA:3.40.50.620 193 497 1.3E-90 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS04215 cfe41c9e689096a77836608e4376ec28 530 SUPERFAMILY SSF52402 196 465 4.19E-65 T 09-03-2017 LS838_RS04215 cfe41c9e689096a77836608e4376ec28 530 Pfam PF00733 Asparagine synthase 207 504 5.3E-80 T 09-03-2017 IPR001962 Asparagine synthase GO:0004066|GO:0006529 LS838_RS04215 cfe41c9e689096a77836608e4376ec28 530 Gene3D G3DSA:3.60.20.10 2 179 3.0E-49 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LS838_RS06395 760a9108960874ee9203c1fc93a22413 431 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 09-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 LS838_RS06395 760a9108960874ee9203c1fc93a22413 431 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 427 8.9E-23 T 09-03-2017 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LS838_RS06395 760a9108960874ee9203c1fc93a22413 431 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 9.0E-27 T 09-03-2017 IPR000362 Fumarate lyase family LS838_RS06395 760a9108960874ee9203c1fc93a22413 431 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 9.0E-27 T 09-03-2017 IPR000362 Fumarate lyase family LS838_RS06395 760a9108960874ee9203c1fc93a22413 431 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 9.0E-27 T 09-03-2017 IPR000362 Fumarate lyase family LS838_RS06395 760a9108960874ee9203c1fc93a22413 431 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 9.0E-27 T 09-03-2017 IPR000362 Fumarate lyase family LS838_RS06395 760a9108960874ee9203c1fc93a22413 431 Gene3D G3DSA:1.20.200.10 91 356 3.2E-92 T 09-03-2017 LS838_RS06395 760a9108960874ee9203c1fc93a22413 431 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 428 6.9E-166 T 09-03-2017 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LS838_RS06395 760a9108960874ee9203c1fc93a22413 431 Gene3D G3DSA:1.10.275.10 2 90 2.9E-34 T 09-03-2017 IPR024083 Fumarase/histidase, N-terminal LS838_RS06395 760a9108960874ee9203c1fc93a22413 431 Pfam PF00206 Lyase 6 285 8.3E-65 T 09-03-2017 IPR022761 Fumarate lyase, N-terminal LS838_RS06395 760a9108960874ee9203c1fc93a22413 431 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 2.8E-8 T 09-03-2017 LS838_RS06395 760a9108960874ee9203c1fc93a22413 431 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 2.8E-8 T 09-03-2017 LS838_RS06395 760a9108960874ee9203c1fc93a22413 431 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 2.8E-8 T 09-03-2017 LS838_RS06395 760a9108960874ee9203c1fc93a22413 431 SUPERFAMILY SSF48557 3 427 5.5E-135 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 LS838_RS06395 760a9108960874ee9203c1fc93a22413 431 Gene3D G3DSA:1.10.40.30 357 428 2.0E-30 T 09-03-2017 LS838_RS06395 760a9108960874ee9203c1fc93a22413 431 SMART SM00998 349 429 3.6E-38 T 09-03-2017 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LS838_RS01465 5b87df8d95e3f08c3c0b5eb885eff9d5 184 Pfam PF00857 Isochorismatase family 5 178 1.1E-39 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LS838_RS01465 5b87df8d95e3f08c3c0b5eb885eff9d5 184 Gene3D G3DSA:3.40.50.850 2 183 2.0E-48 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LS838_RS01465 5b87df8d95e3f08c3c0b5eb885eff9d5 184 SUPERFAMILY SSF52499 2 183 7.33E-52 T 09-03-2017 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 Gene3D G3DSA:3.30.390.30 331 442 1.6E-12 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 Gene3D G3DSA:3.50.50.60 133 313 1.5E-50 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 313 1.2E-59 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 PIRSF PIRSF000350 1 416 3.9E-53 T 09-03-2017 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 SUPERFAMILY SSF51905 1 318 4.1E-50 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 SUPERFAMILY SSF55424 333 439 2.75E-15 T 09-03-2017 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 279 301 7.1E-28 T 09-03-2017 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 129 147 7.1E-28 T 09-03-2017 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 7.1E-28 T 09-03-2017 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 250 266 7.1E-28 T 09-03-2017 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 166 184 7.1E-28 T 09-03-2017 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 Gene3D G3DSA:3.50.50.60 2 132 1.2E-23 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 336 438 2.9E-9 T 09-03-2017 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 166 191 4.0E-40 T 09-03-2017 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 251 265 4.0E-40 T 09-03-2017 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 132 141 4.0E-40 T 09-03-2017 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 294 301 4.0E-40 T 09-03-2017 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 393 408 4.0E-40 T 09-03-2017 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.0E-40 T 09-03-2017 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 4.0E-40 T 09-03-2017 LS838_RS05225 5946d95ad5eae443782149255e99d3c7 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 332 353 4.0E-40 T 09-03-2017 LS838_RS01485 d856187f5e45575b6f511b34dee7eb9a 256 Gene3D G3DSA:3.90.79.10 11 180 9.5E-34 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LS838_RS01485 d856187f5e45575b6f511b34dee7eb9a 256 Pfam PF00293 NUDIX domain 22 138 4.6E-9 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LS838_RS01485 d856187f5e45575b6f511b34dee7eb9a 256 Gene3D G3DSA:1.10.10.10 181 242 1.2E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS01485 d856187f5e45575b6f511b34dee7eb9a 256 SUPERFAMILY SSF55811 11 172 1.54E-25 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LS838_RS01485 d856187f5e45575b6f511b34dee7eb9a 256 SUPERFAMILY SSF46785 175 233 7.35E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS08060 5b1c7e2250dba013611249526fd5d2db 627 TIGRFAM TIGR02005 PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component 2 534 2.0E-222 T 09-03-2017 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401 LS838_RS08060 5b1c7e2250dba013611249526fd5d2db 627 SUPERFAMILY SSF55604 461 533 5.62E-17 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LS838_RS08060 5b1c7e2250dba013611249526fd5d2db 627 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 413 520 6.1E-17 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LS838_RS08060 5b1c7e2250dba013611249526fd5d2db 627 Pfam PF02378 Phosphotransferase system, EIIC 10 350 9.1E-56 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LS838_RS08060 5b1c7e2250dba013611249526fd5d2db 627 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 565 582 - T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LS838_RS08060 5b1c7e2250dba013611249526fd5d2db 627 SUPERFAMILY SSF55604 553 626 1.31E-12 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LS838_RS08060 5b1c7e2250dba013611249526fd5d2db 627 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 473 490 - T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LS838_RS08060 5b1c7e2250dba013611249526fd5d2db 627 Pfam PF00367 phosphotransferase system, EIIB 556 586 4.0E-9 T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LS838_RS08060 5b1c7e2250dba013611249526fd5d2db 627 Pfam PF00367 phosphotransferase system, EIIB 466 494 8.7E-13 T 09-03-2017 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 LS838_RS08060 5b1c7e2250dba013611249526fd5d2db 627 Gene3D G3DSA:3.30.1360.60 459 534 6.6E-22 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LS838_RS08060 5b1c7e2250dba013611249526fd5d2db 627 Gene3D G3DSA:3.30.1360.60 550 627 2.2E-17 T 09-03-2017 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 LS838_RS00285 9be878f85829f3124bb109f50df7fa44 291 Gene3D G3DSA:3.30.420.40 108 290 4.6E-48 T 09-03-2017 LS838_RS00285 9be878f85829f3124bb109f50df7fa44 291 Gene3D G3DSA:3.30.420.40 4 107 1.1E-33 T 09-03-2017 LS838_RS00285 9be878f85829f3124bb109f50df7fa44 291 Pfam PF00480 ROK family 7 288 7.5E-53 T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 LS838_RS00285 9be878f85829f3124bb109f50df7fa44 291 SUPERFAMILY SSF53067 7 289 5.89E-35 T 09-03-2017 LS838_RS00770 c0b809e02ceadd00a45370c0de58b416 451 SMART SM00382 262 443 4.4E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS00770 c0b809e02ceadd00a45370c0de58b416 451 SMART SM00382 29 213 3.1E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS00770 c0b809e02ceadd00a45370c0de58b416 451 SUPERFAMILY SSF52540 5 208 8.95E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00770 c0b809e02ceadd00a45370c0de58b416 451 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS00770 c0b809e02ceadd00a45370c0de58b416 451 SUPERFAMILY SSF52540 241 445 4.65E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00770 c0b809e02ceadd00a45370c0de58b416 451 Gene3D G3DSA:3.40.50.300 3 204 5.6E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00770 c0b809e02ceadd00a45370c0de58b416 451 Pfam PF00005 ABC transporter 255 395 4.2E-24 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS00770 c0b809e02ceadd00a45370c0de58b416 451 Pfam PF00005 ABC transporter 21 159 1.2E-20 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS00770 c0b809e02ceadd00a45370c0de58b416 451 Gene3D G3DSA:3.40.50.300 248 445 1.3E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00770 c0b809e02ceadd00a45370c0de58b416 451 ProSitePatterns PS00211 ABC transporters family signature. 368 382 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS02635 f94af696bb2fcb34f3349a6070d07d56 88 Pfam PF00381 PTS HPr component phosphorylation site 3 81 5.8E-29 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like LS838_RS02635 f94af696bb2fcb34f3349a6070d07d56 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.7E-27 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like LS838_RS02635 f94af696bb2fcb34f3349a6070d07d56 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.7E-27 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like LS838_RS02635 f94af696bb2fcb34f3349a6070d07d56 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.7E-27 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like LS838_RS02635 f94af696bb2fcb34f3349a6070d07d56 88 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 09-03-2017 IPR002114 Phosphotransferase system, HPr serine phosphorylation site LS838_RS02635 f94af696bb2fcb34f3349a6070d07d56 88 SUPERFAMILY SSF55594 1 83 1.7E-28 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like LS838_RS02635 f94af696bb2fcb34f3349a6070d07d56 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 4.5E-33 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like LS838_RS02635 f94af696bb2fcb34f3349a6070d07d56 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 09-03-2017 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site LS838_RS02635 f94af696bb2fcb34f3349a6070d07d56 88 Gene3D G3DSA:3.30.1340.10 1 83 2.0E-34 T 09-03-2017 IPR000032 Phosphocarrier protein HPr-like LS838_RS04035 8b834cc0635a2992294201061a8e22b2 387 SUPERFAMILY SSF53901 168 385 7.68E-64 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LS838_RS04035 8b834cc0635a2992294201061a8e22b2 387 TIGRFAM TIGR01835 HMG-CoA-S_prok: hydroxymethylglutaryl-CoA synthase 3 384 1.4E-126 T 09-03-2017 IPR011554 Hydroxymethylglutaryl-CoA synthase, prokaryotic KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922 LS838_RS04035 8b834cc0635a2992294201061a8e22b2 387 SUPERFAMILY SSF53901 2 166 4.22E-38 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LS838_RS04035 8b834cc0635a2992294201061a8e22b2 387 Gene3D G3DSA:3.40.47.10 1 245 1.6E-78 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LS838_RS04035 8b834cc0635a2992294201061a8e22b2 387 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 264 386 2.3E-14 T 09-03-2017 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: R-HSA-1989781 LS838_RS04035 8b834cc0635a2992294201061a8e22b2 387 Pfam PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal 2 164 1.2E-16 T 09-03-2017 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal GO:0004421|GO:0008299 Reactome: R-HSA-1989781 LS838_RS05915 c99e8e14e850bee4e773f26b72160e9f 403 SUPERFAMILY SSF54814 200 277 4.97E-31 T 09-03-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 LS838_RS05915 c99e8e14e850bee4e773f26b72160e9f 403 Gene3D G3DSA:3.30.300.20 199 277 4.3E-37 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta LS838_RS05915 c99e8e14e850bee4e773f26b72160e9f 403 Gene3D G3DSA:3.30.300.20 278 347 1.1E-31 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta LS838_RS05915 c99e8e14e850bee4e773f26b72160e9f 403 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 344 2.0E-126 T 09-03-2017 IPR010213 Transcription termination factor NusA GO:0003723 LS838_RS05915 c99e8e14e850bee4e773f26b72160e9f 403 SMART SM00322 230 303 1.2 T 09-03-2017 IPR004087 K Homology domain GO:0003676 LS838_RS05915 c99e8e14e850bee4e773f26b72160e9f 403 SMART SM00322 304 379 0.7 T 09-03-2017 IPR004087 K Homology domain GO:0003676 LS838_RS05915 c99e8e14e850bee4e773f26b72160e9f 403 SUPERFAMILY SSF54814 279 345 6.15E-15 T 09-03-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 LS838_RS05915 c99e8e14e850bee4e773f26b72160e9f 403 Gene3D G3DSA:2.40.50.140 128 198 2.5E-22 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS05915 c99e8e14e850bee4e773f26b72160e9f 403 Pfam PF13184 NusA-like KH domain 230 298 7.1E-31 T 09-03-2017 IPR025249 KH domain, NusA-like GO:0003723 LS838_RS05915 c99e8e14e850bee4e773f26b72160e9f 403 SUPERFAMILY SSF50249 132 199 1.64E-13 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS05915 c99e8e14e850bee4e773f26b72160e9f 403 SUPERFAMILY SSF69705 1 125 7.06E-41 T 09-03-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 LS838_RS05915 c99e8e14e850bee4e773f26b72160e9f 403 Pfam PF08529 NusA N-terminal domain 4 123 9.7E-40 T 09-03-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 LS838_RS05915 c99e8e14e850bee4e773f26b72160e9f 403 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 387 28.917 T 09-03-2017 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 LS838_RS05915 c99e8e14e850bee4e773f26b72160e9f 403 Gene3D G3DSA:3.30.1480.10 1 123 4.4E-46 T 09-03-2017 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 LS838_RS06765 2af86afffbb48b9745b5954fbc9e6ff4 215 Gene3D G3DSA:3.30.1940.10 20 90 9.2E-23 T 09-03-2017 IPR027855 Domain of unknown function DUF4479 LS838_RS06765 2af86afffbb48b9745b5954fbc9e6ff4 215 Gene3D G3DSA:2.40.50.140 93 199 8.6E-42 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS06765 2af86afffbb48b9745b5954fbc9e6ff4 215 Pfam PF14794 Domain of unknown function (DUF4479) 22 90 8.6E-21 T 09-03-2017 IPR027855 Domain of unknown function DUF4479 LS838_RS06765 2af86afffbb48b9745b5954fbc9e6ff4 215 SUPERFAMILY SSF50249 90 199 1.42E-31 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS06765 2af86afffbb48b9745b5954fbc9e6ff4 215 Pfam PF01588 Putative tRNA binding domain 95 197 6.7E-22 T 09-03-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 LS838_RS03605 d180f9f16c9ad0e14ae23e0677a22fdf 318 ProSitePatterns PS00091 Thymidylate synthase active site. 180 208 - T 09-03-2017 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LS838_RS03605 d180f9f16c9ad0e14ae23e0677a22fdf 318 Hamap MF_00008 Thymidylate synthase [thyA]. 5 318 40.154 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LS838_RS03605 d180f9f16c9ad0e14ae23e0677a22fdf 318 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 6 318 3.3E-154 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LS838_RS03605 d180f9f16c9ad0e14ae23e0677a22fdf 318 PRINTS PR00108 Thymidylate synthase family signature 213 239 8.5E-48 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LS838_RS03605 d180f9f16c9ad0e14ae23e0677a22fdf 318 PRINTS PR00108 Thymidylate synthase family signature 251 268 8.5E-48 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LS838_RS03605 d180f9f16c9ad0e14ae23e0677a22fdf 318 PRINTS PR00108 Thymidylate synthase family signature 169 188 8.5E-48 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LS838_RS03605 d180f9f16c9ad0e14ae23e0677a22fdf 318 PRINTS PR00108 Thymidylate synthase family signature 46 67 8.5E-48 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LS838_RS03605 d180f9f16c9ad0e14ae23e0677a22fdf 318 PRINTS PR00108 Thymidylate synthase family signature 195 210 8.5E-48 T 09-03-2017 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LS838_RS03605 d180f9f16c9ad0e14ae23e0677a22fdf 318 Gene3D G3DSA:3.30.572.10 137 318 2.4E-126 T 09-03-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LS838_RS03605 d180f9f16c9ad0e14ae23e0677a22fdf 318 Gene3D G3DSA:3.30.572.10 3 98 2.4E-126 T 09-03-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LS838_RS03605 d180f9f16c9ad0e14ae23e0677a22fdf 318 SUPERFAMILY SSF55831 5 318 1.3E-134 T 09-03-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LS838_RS03605 d180f9f16c9ad0e14ae23e0677a22fdf 318 Pfam PF00303 Thymidylate synthase 6 318 4.2E-114 T 09-03-2017 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 LS838_RS00690 6c1827afd153e6b48620788d729dba50 289 SMART SM00563 93 207 2.4E-19 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LS838_RS00690 6c1827afd153e6b48620788d729dba50 289 SUPERFAMILY SSF69593 73 205 1.23E-8 T 09-03-2017 LS838_RS00690 6c1827afd153e6b48620788d729dba50 289 Pfam PF01553 Acyltransferase 76 206 3.7E-14 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LS838_RS06255 06d7e691c016e893aa5807a5e0da4b1b 271 Pfam PF01728 FtsJ-like methyltransferase 62 245 6.0E-20 T 09-03-2017 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 LS838_RS06255 06d7e691c016e893aa5807a5e0da4b1b 271 Gene3D G3DSA:3.40.50.150 94 150 5.5E-4 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS06255 06d7e691c016e893aa5807a5e0da4b1b 271 SUPERFAMILY SSF53335 52 247 2.03E-24 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS06255 06d7e691c016e893aa5807a5e0da4b1b 271 SUPERFAMILY SSF55174 4 71 8.1E-8 T 09-03-2017 LS838_RS06255 06d7e691c016e893aa5807a5e0da4b1b 271 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 6 239 8.2E-77 T 09-03-2017 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 LS838_RS06255 06d7e691c016e893aa5807a5e0da4b1b 271 SMART SM00363 5 71 0.0021 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS06255 06d7e691c016e893aa5807a5e0da4b1b 271 PIRSF PIRSF005578 1 264 1.7E-98 T 09-03-2017 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 LS838_RS06255 06d7e691c016e893aa5807a5e0da4b1b 271 Gene3D G3DSA:3.10.290.10 5 93 1.6E-17 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS08455 685eb99b5b5fb3987928810e4956eeb4 147 Pfam PF04397 LytTr DNA-binding domain 51 142 8.2E-16 T 09-03-2017 IPR007492 LytTR DNA-binding domain GO:0003677 LS838_RS08455 685eb99b5b5fb3987928810e4956eeb4 147 SMART SM00850 48 144 8.3E-19 T 09-03-2017 IPR007492 LytTR DNA-binding domain GO:0003677 LS838_RS08455 685eb99b5b5fb3987928810e4956eeb4 147 Gene3D G3DSA:2.40.50.40 40 105 5.1E-14 T 09-03-2017 LS838_RS06195 2fc8b8e2de475ad43c75dd15991f37a1 227 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 19 216 1.5E-36 T 09-03-2017 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 LS838_RS06195 2fc8b8e2de475ad43c75dd15991f37a1 227 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 24 118 5.2E-13 T 09-03-2017 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 LS838_RS06195 2fc8b8e2de475ad43c75dd15991f37a1 227 Gene3D G3DSA:3.40.50.10240 3 139 2.4E-22 T 09-03-2017 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 LS838_RS06195 2fc8b8e2de475ad43c75dd15991f37a1 227 SUPERFAMILY SSF63999 4 137 3.4E-29 T 09-03-2017 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 LS838_RS06195 2fc8b8e2de475ad43c75dd15991f37a1 227 SMART SM00983 149 214 1.0E-9 T 09-03-2017 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 LS838_RS06195 2fc8b8e2de475ad43c75dd15991f37a1 227 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 154 213 7.0E-6 T 09-03-2017 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 LS838_RS00015 31b9f27a125f897b47545d34689e33b7 76 Pfam PF13275 S4 domain 9 72 3.5E-26 T 09-03-2017 LS838_RS00015 31b9f27a125f897b47545d34689e33b7 76 SUPERFAMILY SSF55174 6 72 2.09E-19 T 09-03-2017 LS838_RS00015 31b9f27a125f897b47545d34689e33b7 76 Gene3D G3DSA:3.10.290.10 5 73 7.0E-26 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS00015 31b9f27a125f897b47545d34689e33b7 76 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 9 66 5.0E-27 T 09-03-2017 IPR014330 RNA-binding S4-related,YaaA LS838_RS09865 01753f0f7b2143698e3e8dce6974019a 512 Gene3D G3DSA:1.10.3080.10 3 422 1.9E-88 T 09-03-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 LS838_RS09865 01753f0f7b2143698e3e8dce6974019a 512 Pfam PF02080 TrkA-C domain 440 493 1.3E-9 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LS838_RS09865 01753f0f7b2143698e3e8dce6974019a 512 SUPERFAMILY SSF116726 438 501 6.41E-9 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LS838_RS09865 01753f0f7b2143698e3e8dce6974019a 512 SUPERFAMILY SSF81340 8 423 1.96E-96 T 09-03-2017 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 LS838_RS09865 01753f0f7b2143698e3e8dce6974019a 512 PRINTS PR00762 Chloride channel signature 376 395 1.2E-26 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LS838_RS09865 01753f0f7b2143698e3e8dce6974019a 512 PRINTS PR00762 Chloride channel signature 160 179 1.2E-26 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LS838_RS09865 01753f0f7b2143698e3e8dce6974019a 512 PRINTS PR00762 Chloride channel signature 323 343 1.2E-26 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LS838_RS09865 01753f0f7b2143698e3e8dce6974019a 512 PRINTS PR00762 Chloride channel signature 80 97 1.2E-26 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LS838_RS09865 01753f0f7b2143698e3e8dce6974019a 512 Gene3D G3DSA:3.30.70.1450 439 490 1.6E-5 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LS838_RS09865 01753f0f7b2143698e3e8dce6974019a 512 Pfam PF00654 Voltage gated chloride channel 69 408 7.4E-84 T 09-03-2017 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 LS838_RS05150 f7ab25a003cd3bdc829ddf8988309b1e 307 Gene3D G3DSA:1.10.260.40 61 94 1.3E-7 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS05150 f7ab25a003cd3bdc829ddf8988309b1e 307 SUPERFAMILY SSF47413 61 105 1.25E-7 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS05150 f7ab25a003cd3bdc829ddf8988309b1e 307 SMART SM00530 62 114 6.5E-4 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LS838_RS05150 f7ab25a003cd3bdc829ddf8988309b1e 307 Pfam PF13274 Protein of unknown function (DUF4065) 185 283 2.7E-10 T 09-03-2017 IPR025272 Domain of unknown function DUF4065 LS838_RS05150 f7ab25a003cd3bdc829ddf8988309b1e 307 Pfam PF01381 Helix-turn-helix 63 99 3.1E-7 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LS838_RS00730 85eaa7f6a5167a833f974e0f92dbbe76 265 Pfam PF12706 Beta-lactamase superfamily domain 22 208 1.1E-24 T 09-03-2017 IPR001279 Metallo-beta-lactamase LS838_RS00730 85eaa7f6a5167a833f974e0f92dbbe76 265 SUPERFAMILY SSF56281 7 234 2.36E-42 T 09-03-2017 IPR001279 Metallo-beta-lactamase LS838_RS00730 85eaa7f6a5167a833f974e0f92dbbe76 265 SMART SM00849 11 192 3.9E-8 T 09-03-2017 IPR001279 Metallo-beta-lactamase LS838_RS00730 85eaa7f6a5167a833f974e0f92dbbe76 265 Gene3D G3DSA:3.60.15.10 3 243 9.7E-38 T 09-03-2017 IPR001279 Metallo-beta-lactamase LS838_RS01725 1e6759d0e874f7a3c6e0614625d80298 507 SUPERFAMILY SSF50249 5 146 6.61E-40 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS01725 1e6759d0e874f7a3c6e0614625d80298 507 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 12 495 43.638 T 09-03-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 LS838_RS01725 1e6759d0e874f7a3c6e0614625d80298 507 Pfam PF00152 tRNA synthetases class II (D, K and N) 154 491 2.9E-74 T 09-03-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS01725 1e6759d0e874f7a3c6e0614625d80298 507 SUPERFAMILY SSF55681 153 492 8.53E-116 T 09-03-2017 LS838_RS01725 1e6759d0e874f7a3c6e0614625d80298 507 Gene3D G3DSA:2.40.50.140 7 146 1.2E-44 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS01725 1e6759d0e874f7a3c6e0614625d80298 507 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 6 495 1.2E-200 T 09-03-2017 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 LS838_RS01725 1e6759d0e874f7a3c6e0614625d80298 507 Gene3D G3DSA:3.30.930.10 148 490 4.1E-117 T 09-03-2017 LS838_RS01725 1e6759d0e874f7a3c6e0614625d80298 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 206 222 1.4E-36 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 LS838_RS01725 1e6759d0e874f7a3c6e0614625d80298 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 376 392 1.4E-36 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 LS838_RS01725 1e6759d0e874f7a3c6e0614625d80298 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 235 248 1.4E-36 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 LS838_RS01725 1e6759d0e874f7a3c6e0614625d80298 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 190 200 1.4E-36 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 LS838_RS01725 1e6759d0e874f7a3c6e0614625d80298 507 PRINTS PR00982 Lysyl-tRNA synthetase signature 253 270 1.4E-36 T 09-03-2017 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 LS838_RS01725 1e6759d0e874f7a3c6e0614625d80298 507 Pfam PF01336 OB-fold nucleic acid binding domain 61 136 2.8E-14 T 09-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 LS838_RS05705 5951413131ca6db00a32da9fc306d941 256 Pfam PF01351 Ribonuclease HII 70 245 1.1E-38 T 09-03-2017 IPR024567 Ribonuclease HII/HIII domain LS838_RS05705 5951413131ca6db00a32da9fc306d941 256 SUPERFAMILY SSF53098 62 251 1.08E-67 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS05705 5951413131ca6db00a32da9fc306d941 256 Gene3D G3DSA:3.30.420.10 68 207 2.2E-45 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS05705 5951413131ca6db00a32da9fc306d941 256 Hamap MF_00052_B Ribonuclease HII [rnhB]. 68 246 36.138 T 09-03-2017 IPR022898 Ribonuclease HII GO:0004523 LS838_RS03905 9e950c1102b7c555e7128beb12adb23c 301 SUPERFAMILY SSF53850 90 291 3.06E-22 T 09-03-2017 LS838_RS03905 9e950c1102b7c555e7128beb12adb23c 301 SUPERFAMILY SSF46785 1 86 2.22E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS03905 9e950c1102b7c555e7128beb12adb23c 301 Gene3D G3DSA:3.40.190.10 92 178 2.0E-8 T 09-03-2017 LS838_RS03905 9e950c1102b7c555e7128beb12adb23c 301 Gene3D G3DSA:3.40.190.10 179 263 1.1E-6 T 09-03-2017 LS838_RS03905 9e950c1102b7c555e7128beb12adb23c 301 Gene3D G3DSA:1.10.10.10 1 87 1.8E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS03905 9e950c1102b7c555e7128beb12adb23c 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.1E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS03905 9e950c1102b7c555e7128beb12adb23c 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.1E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS03905 9e950c1102b7c555e7128beb12adb23c 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.1E-5 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS03905 9e950c1102b7c555e7128beb12adb23c 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.8E-16 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS03905 9e950c1102b7c555e7128beb12adb23c 301 Pfam PF03466 LysR substrate binding domain 87 291 2.1E-23 T 09-03-2017 IPR005119 LysR, substrate-binding LS838_RS08465 33757fac5887f7e86586156792a2798e 276 SMART SM00062 43 268 2.9E-63 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LS838_RS08465 33757fac5887f7e86586156792a2798e 276 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 66 79 - T 09-03-2017 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 LS838_RS08465 33757fac5887f7e86586156792a2798e 276 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 267 1.3E-63 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LS838_RS08465 33757fac5887f7e86586156792a2798e 276 Gene3D G3DSA:3.40.190.10 227 268 3.2E-41 T 09-03-2017 LS838_RS08465 33757fac5887f7e86586156792a2798e 276 Gene3D G3DSA:3.40.190.10 40 129 3.2E-41 T 09-03-2017 LS838_RS08465 33757fac5887f7e86586156792a2798e 276 Gene3D G3DSA:3.40.190.10 130 226 5.5E-22 T 09-03-2017 LS838_RS08465 33757fac5887f7e86586156792a2798e 276 SUPERFAMILY SSF53850 4 268 3.96E-68 T 09-03-2017 LS838_RS07090 b44b3032e640c51be8e6b98d26440a38 107 Pfam PF06949 Protein of unknown function (DUF1292) 19 96 2.1E-16 T 09-03-2017 IPR009711 Uncharacterised protein family UPF0473 LS838_RS07090 b44b3032e640c51be8e6b98d26440a38 107 Hamap MF_01448 UPF0473 protein . 10 97 21.41 T 09-03-2017 IPR009711 Uncharacterised protein family UPF0473 LS838_RS07090 b44b3032e640c51be8e6b98d26440a38 107 ProSitePatterns PS00018 EF-hand calcium-binding domain. 63 75 - T 09-03-2017 IPR018247 EF-Hand 1, calcium-binding site LS838_RS04430 092133cdf74c2b515560e64811545b1e 89 SUPERFAMILY SSF90123 2 66 2.75E-8 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS04430 092133cdf74c2b515560e64811545b1e 89 Gene3D G3DSA:1.20.1560.10 2 64 2.4E-6 T 09-03-2017 LS838_RS09475 482d9528a247daaf63c2277634fed854 392 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 197 4.7E-69 T 09-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LS838_RS09475 482d9528a247daaf63c2277634fed854 392 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 202 36.937 T 09-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LS838_RS09475 482d9528a247daaf63c2277634fed854 392 Pfam PF00925 GTP cyclohydrolase II 209 365 1.4E-63 T 09-03-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 LS838_RS09475 482d9528a247daaf63c2277634fed854 392 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 197 6.4E-78 T 09-03-2017 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LS838_RS09475 482d9528a247daaf63c2277634fed854 392 SUPERFAMILY SSF55821 3 199 1.83E-77 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain LS838_RS09475 482d9528a247daaf63c2277634fed854 392 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 201 391 37.67 T 09-03-2017 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 LS838_RS09475 482d9528a247daaf63c2277634fed854 392 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 209 389 9.3E-68 T 09-03-2017 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 LS838_RS09475 482d9528a247daaf63c2277634fed854 392 Gene3D G3DSA:3.90.870.10 2 201 2.2E-86 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain LS838_RS09475 482d9528a247daaf63c2277634fed854 392 PIRSF PIRSF001259 1 392 3.3E-147 T 09-03-2017 LS838_RS09475 482d9528a247daaf63c2277634fed854 392 SUPERFAMILY SSF142695 209 367 1.83E-56 T 09-03-2017 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 LS838_RS06160 184bc06c5d81074a1d4040913b26b29a 554 Gene3D G3DSA:3.40.50.2300 345 447 2.5E-6 T 09-03-2017 LS838_RS06160 184bc06c5d81074a1d4040913b26b29a 554 Pfam PF02734 DAK2 domain 36 200 1.8E-42 T 09-03-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 LS838_RS06160 184bc06c5d81074a1d4040913b26b29a 554 SUPERFAMILY SSF101473 5 201 1.44E-46 T 09-03-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 LS838_RS06160 184bc06c5d81074a1d4040913b26b29a 554 SMART SM01121 241 554 4.2E-181 T 09-03-2017 IPR033470 Uncharacterised protein, DhaK domain LS838_RS06160 184bc06c5d81074a1d4040913b26b29a 554 SMART SM01120 36 201 2.3E-72 T 09-03-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 LS838_RS06160 184bc06c5d81074a1d4040913b26b29a 554 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 11 554 1.8E-203 T 09-03-2017 IPR019986 DAK2 domain-containing protein YloV LS838_RS06160 184bc06c5d81074a1d4040913b26b29a 554 Pfam PF13684 Dihydroxyacetone kinase family 242 554 1.8E-118 T 09-03-2017 IPR033470 Uncharacterised protein, DhaK domain LS838_RS05385 7e607e5d9eb1d8e6a6fabdd47927505c 219 Gene3D G3DSA:3.40.50.1390 65 184 5.5E-18 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS05385 7e607e5d9eb1d8e6a6fabdd47927505c 219 SUPERFAMILY SSF46955 5 51 1.37E-11 T 09-03-2017 IPR009061 Putative DNA-binding domain LS838_RS05385 7e607e5d9eb1d8e6a6fabdd47927505c 219 SMART SM00857 65 205 2.4E-21 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS05385 7e607e5d9eb1d8e6a6fabdd47927505c 219 Pfam PF00376 MerR family regulatory protein 6 42 3.3E-12 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS05385 7e607e5d9eb1d8e6a6fabdd47927505c 219 SUPERFAMILY SSF53041 65 198 1.14E-21 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS05385 7e607e5d9eb1d8e6a6fabdd47927505c 219 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS05385 7e607e5d9eb1d8e6a6fabdd47927505c 219 Gene3D G3DSA:1.10.1660.10 2 50 1.2E-12 T 09-03-2017 LS838_RS05385 7e607e5d9eb1d8e6a6fabdd47927505c 219 SMART SM00422 5 67 4.4E-6 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS05385 7e607e5d9eb1d8e6a6fabdd47927505c 219 Pfam PF00239 Resolvase, N terminal domain 66 196 2.1E-20 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS05385 7e607e5d9eb1d8e6a6fabdd47927505c 219 ProSitePatterns PS00397 Site-specific recombinases active site. 68 76 - T 09-03-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 LS838_RS07855 f6df94956dd645810044f012d61bb083 328 Gene3D G3DSA:3.40.50.2300 170 305 1.4E-36 T 09-03-2017 LS838_RS07855 f6df94956dd645810044f012d61bb083 328 SUPERFAMILY SSF53822 59 322 1.04E-64 T 09-03-2017 IPR028082 Periplasmic binding protein-like I LS838_RS07855 f6df94956dd645810044f012d61bb083 328 SUPERFAMILY SSF47413 2 60 1.95E-18 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS07855 f6df94956dd645810044f012d61bb083 328 Gene3D G3DSA:3.40.50.2300 55 169 1.8E-45 T 09-03-2017 LS838_RS07855 f6df94956dd645810044f012d61bb083 328 Pfam PF13377 Periplasmic binding protein-like domain 165 322 6.3E-27 T 09-03-2017 LS838_RS07855 f6df94956dd645810044f012d61bb083 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 49 1.7E-20 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LS838_RS07855 f6df94956dd645810044f012d61bb083 328 SMART SM00354 2 72 7.3E-37 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LS838_RS07855 f6df94956dd645810044f012d61bb083 328 Gene3D G3DSA:1.10.260.40 4 54 5.0E-26 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS08670 c472109eb960afcf884800eaad9306fc 147 Gene3D G3DSA:3.30.70.270 2 147 1.0E-36 T 09-03-2017 LS838_RS08670 c472109eb960afcf884800eaad9306fc 147 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 2 146 4.0E-33 T 09-03-2017 IPR000160 GGDEF domain LS838_RS08670 c472109eb960afcf884800eaad9306fc 147 SMART SM00267 1 147 8.0E-24 T 09-03-2017 IPR000160 GGDEF domain LS838_RS08670 c472109eb960afcf884800eaad9306fc 147 Pfam PF00990 Diguanylate cyclase, GGDEF domain 2 147 8.0E-34 T 09-03-2017 IPR000160 GGDEF domain LS838_RS08670 c472109eb960afcf884800eaad9306fc 147 SUPERFAMILY SSF55073 4 147 1.57E-34 T 09-03-2017 IPR029787 Nucleotide cyclase LS838_RS03530 ac5cd83f257075a468ef3c60d77b81c0 736 SUPERFAMILY SSF56281 471 718 2.61E-44 T 09-03-2017 IPR001279 Metallo-beta-lactamase LS838_RS03530 ac5cd83f257075a468ef3c60d77b81c0 736 Gene3D G3DSA:3.60.15.10 471 700 4.7E-30 T 09-03-2017 IPR001279 Metallo-beta-lactamase LS838_RS03530 ac5cd83f257075a468ef3c60d77b81c0 736 Pfam PF00753 Metallo-beta-lactamase superfamily 477 679 3.4E-12 T 09-03-2017 IPR001279 Metallo-beta-lactamase LS838_RS03530 ac5cd83f257075a468ef3c60d77b81c0 736 SMART SM00849 479 682 1.3E-6 T 09-03-2017 IPR001279 Metallo-beta-lactamase LS838_RS03530 ac5cd83f257075a468ef3c60d77b81c0 736 Pfam PF03772 Competence protein 212 446 3.6E-27 T 09-03-2017 IPR004477 ComEC/Rec2-related protein LS838_RS03530 ac5cd83f257075a468ef3c60d77b81c0 736 Pfam PF13567 Domain of unknown function (DUF4131) 5 161 1.8E-9 T 09-03-2017 IPR025405 Domain of unknown function DUF4131 LS838_RS03530 ac5cd83f257075a468ef3c60d77b81c0 736 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 108 711 1.7E-68 T 09-03-2017 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 LS838_RS04420 0df73e7aa0a7a49af5e3ff5cc187d47b 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 15 241 5.2E-23 T 09-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 LS838_RS04420 0df73e7aa0a7a49af5e3ff5cc187d47b 273 Gene3D G3DSA:3.40.50.1000 5 81 1.9E-47 T 09-03-2017 IPR023214 HAD-like domain LS838_RS04420 0df73e7aa0a7a49af5e3ff5cc187d47b 273 Gene3D G3DSA:3.40.50.1000 188 272 1.9E-47 T 09-03-2017 IPR023214 HAD-like domain LS838_RS04420 0df73e7aa0a7a49af5e3ff5cc187d47b 273 SUPERFAMILY SSF56784 9 272 7.13E-61 T 09-03-2017 IPR023214 HAD-like domain LS838_RS04420 0df73e7aa0a7a49af5e3ff5cc187d47b 273 Gene3D G3DSA:3.30.1240.10 92 187 6.5E-15 T 09-03-2017 LS838_RS04420 0df73e7aa0a7a49af5e3ff5cc187d47b 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 15 26 - T 09-03-2017 IPR000150 Cof protein GO:0016787 LS838_RS04420 0df73e7aa0a7a49af5e3ff5cc187d47b 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 16 268 8.4E-53 T 09-03-2017 IPR023214 HAD-like domain LS838_RS04420 0df73e7aa0a7a49af5e3ff5cc187d47b 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 15 268 1.7E-47 T 09-03-2017 IPR000150 Cof protein GO:0016787 LS838_RS00515 30578232643a98de4734e208ea3720de 159 Gene3D G3DSA:3.30.1360.80 1 158 2.7E-66 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LS838_RS00515 30578232643a98de4734e208ea3720de 159 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 155 36.461 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LS838_RS00515 30578232643a98de4734e208ea3720de 159 PIRSF PIRSF006160 1 158 1.2E-63 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LS838_RS00515 30578232643a98de4734e208ea3720de 159 SUPERFAMILY SSF63411 3 158 2.2E-62 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LS838_RS00515 30578232643a98de4734e208ea3720de 159 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 150 2.0E-73 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LS838_RS00515 30578232643a98de4734e208ea3720de 159 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 73 91 4.1E-34 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LS838_RS00515 30578232643a98de4734e208ea3720de 159 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 4.1E-34 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LS838_RS00515 30578232643a98de4734e208ea3720de 159 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 4.1E-34 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LS838_RS00515 30578232643a98de4734e208ea3720de 159 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 4.1E-34 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LS838_RS00515 30578232643a98de4734e208ea3720de 159 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 117 136 4.1E-34 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LS838_RS00515 30578232643a98de4734e208ea3720de 159 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 3 148 4.2E-53 T 09-03-2017 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LS838_RS07290 67a2fe731ec1e8a1ec957a59b20a2a22 1170 Gene3D G3DSA:3.20.20.80 505 908 1.5E-125 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS07290 67a2fe731ec1e8a1ec957a59b20a2a22 1170 SUPERFAMILY SSF69360 152 206 2.22E-6 T 09-03-2017 LS838_RS07290 67a2fe731ec1e8a1ec957a59b20a2a22 1170 SUPERFAMILY SSF51445 514 907 1.64E-87 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS07290 67a2fe731ec1e8a1ec957a59b20a2a22 1170 Gene3D G3DSA:2.10.270.10 143 203 1.1E-7 T 09-03-2017 LS838_RS07290 67a2fe731ec1e8a1ec957a59b20a2a22 1170 Pfam PF07745 Glycosyl hydrolase family 53 520 901 2.3E-93 T 09-03-2017 IPR011683 Glycosyl hydrolase family 53 GO:0015926 LS838_RS03545 2a5d5f1ce7858bdbd186c9bfeac2e254 89 Pfam PF00312 Ribosomal protein S15 8 88 2.5E-34 T 09-03-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS03545 2a5d5f1ce7858bdbd186c9bfeac2e254 89 Gene3D G3DSA:1.10.287.10 3 89 6.3E-37 T 09-03-2017 IPR009068 S15/NS1, RNA-binding LS838_RS03545 2a5d5f1ce7858bdbd186c9bfeac2e254 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 3.4E-37 T 09-03-2017 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS03545 2a5d5f1ce7858bdbd186c9bfeac2e254 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 5.0E-39 T 09-03-2017 LS838_RS03545 2a5d5f1ce7858bdbd186c9bfeac2e254 89 SUPERFAMILY SSF47060 3 89 2.09E-33 T 09-03-2017 IPR009068 S15/NS1, RNA-binding LS838_RS03545 2a5d5f1ce7858bdbd186c9bfeac2e254 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.866 T 09-03-2017 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS03545 2a5d5f1ce7858bdbd186c9bfeac2e254 89 SMART SM01387 8 88 6.1E-47 T 09-03-2017 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS03215 d1423592617c4a610274ac0be183b9d2 180 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 140 159 - T 09-03-2017 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210 LS838_RS03215 d1423592617c4a610274ac0be183b9d2 180 Pfam PF00213 ATP synthase delta (OSCP) subunit 9 177 6.2E-42 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 LS838_RS03215 d1423592617c4a610274ac0be183b9d2 180 SUPERFAMILY SSF47928 9 107 1.83E-20 T 09-03-2017 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 LS838_RS03215 d1423592617c4a610274ac0be183b9d2 180 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 9 177 1.3E-31 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 LS838_RS03215 d1423592617c4a610274ac0be183b9d2 180 Hamap MF_01416 ATP synthase subunit delta [atpD]. 4 180 17.699 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 LS838_RS03215 d1423592617c4a610274ac0be183b9d2 180 Gene3D G3DSA:1.10.520.20 8 107 1.6E-20 T 09-03-2017 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 LS838_RS03215 d1423592617c4a610274ac0be183b9d2 180 PRINTS PR00125 ATP synthase delta subunit signature 8 27 1.0E-17 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 LS838_RS03215 d1423592617c4a610274ac0be183b9d2 180 PRINTS PR00125 ATP synthase delta subunit signature 153 171 1.0E-17 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 LS838_RS03215 d1423592617c4a610274ac0be183b9d2 180 PRINTS PR00125 ATP synthase delta subunit signature 87 101 1.0E-17 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 LS838_RS03215 d1423592617c4a610274ac0be183b9d2 180 PRINTS PR00125 ATP synthase delta subunit signature 138 153 1.0E-17 T 09-03-2017 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 LS838_RS02015 2e98518a9e35af3984a0f74de8fe5c78 543 Gene3D G3DSA:3.90.76.10 44 217 6.0E-47 T 09-03-2017 LS838_RS02015 2e98518a9e35af3984a0f74de8fe5c78 543 SUPERFAMILY SSF53850 33 541 4.19E-117 T 09-03-2017 LS838_RS02015 2e98518a9e35af3984a0f74de8fe5c78 543 Gene3D G3DSA:3.10.105.10 290 514 1.5E-47 T 09-03-2017 LS838_RS02015 2e98518a9e35af3984a0f74de8fe5c78 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 467 1.6E-68 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain LS838_RS02015 2e98518a9e35af3984a0f74de8fe5c78 543 PIRSF PIRSF002741 1 542 3.4E-92 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LS838_RS00740 e133226b0ca12dbbbe6a2a3f4179acec 159 Gene3D G3DSA:3.40.1280.10 1 159 1.9E-62 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LS838_RS00740 e133226b0ca12dbbbe6a2a3f4179acec 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 29.983 T 09-03-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS00740 e133226b0ca12dbbbe6a2a3f4179acec 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 158 7.5E-58 T 09-03-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS00740 e133226b0ca12dbbbe6a2a3f4179acec 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 159 1.1E-55 T 09-03-2017 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS00740 e133226b0ca12dbbbe6a2a3f4179acec 159 SUPERFAMILY SSF75217 1 157 9.81E-60 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases LS838_RS00740 e133226b0ca12dbbbe6a2a3f4179acec 159 PIRSF PIRSF004505 1 159 2.6E-52 T 09-03-2017 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS04615 c5b0e1f7c788328c6f42174def2278fa 293 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 285 8.1E-87 T 09-03-2017 IPR003797 DegV LS838_RS04615 c5b0e1f7c788328c6f42174def2278fa 293 Gene3D G3DSA:3.40.50.10170 1 152 1.7E-44 T 09-03-2017 LS838_RS04615 c5b0e1f7c788328c6f42174def2278fa 293 SUPERFAMILY SSF82549 1 287 1.44E-83 T 09-03-2017 LS838_RS04615 c5b0e1f7c788328c6f42174def2278fa 293 Gene3D G3DSA:3.30.1180.10 155 287 6.2E-37 T 09-03-2017 LS838_RS04615 c5b0e1f7c788328c6f42174def2278fa 293 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 285 5.6E-75 T 09-03-2017 IPR003797 DegV LS838_RS02880 db240a059bc362e0cd9307cb2b22f0bf 254 SUPERFAMILY SSF52540 6 234 7.42E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02880 db240a059bc362e0cd9307cb2b22f0bf 254 Pfam PF00005 ABC transporter 29 182 1.3E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS02880 db240a059bc362e0cd9307cb2b22f0bf 254 Gene3D G3DSA:3.40.50.300 3 235 2.5E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02880 db240a059bc362e0cd9307cb2b22f0bf 254 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS02880 db240a059bc362e0cd9307cb2b22f0bf 254 SMART SM00382 36 233 3.0E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS00040 fe37a2df4d83287c62c8d046cc260632 192 SUPERFAMILY SSF50249 1 192 5.14E-48 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS00040 fe37a2df4d83287c62c8d046cc260632 192 Pfam PF00436 Single-strand binding protein family 2 102 7.3E-34 T 09-03-2017 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 LS838_RS00040 fe37a2df4d83287c62c8d046cc260632 192 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 33.466 T 09-03-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 LS838_RS00040 fe37a2df4d83287c62c8d046cc260632 192 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 192 1.6E-42 T 09-03-2017 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 LS838_RS00040 fe37a2df4d83287c62c8d046cc260632 192 Gene3D G3DSA:2.40.50.140 172 192 2.7E-43 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS00040 fe37a2df4d83287c62c8d046cc260632 192 Gene3D G3DSA:2.40.50.140 1 117 2.7E-43 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS03940 51db6967454b16266902d389220bb958 921 SUPERFAMILY SSF52540 403 492 1.78E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03940 51db6967454b16266902d389220bb958 921 SUPERFAMILY SSF52540 542 673 1.78E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03940 51db6967454b16266902d389220bb958 921 SUPERFAMILY SSF52540 309 358 1.78E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03940 51db6967454b16266902d389220bb958 921 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 26 227 5.6E-28 T 09-03-2017 IPR006483 CRISPR-associated Cas3-HD domain LS838_RS03940 51db6967454b16266902d389220bb958 921 SMART SM00487 286 522 5.6E-6 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LS838_RS03940 51db6967454b16266902d389220bb958 921 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 309 714 2.5E-61 T 09-03-2017 IPR006474 Helicase Cas3, CRISPR-associated, core LS838_RS03940 51db6967454b16266902d389220bb958 921 Pfam PF00270 DEAD/DEAH box helicase 301 492 4.7E-8 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LS838_RS03940 51db6967454b16266902d389220bb958 921 Gene3D G3DSA:3.40.50.300 280 496 5.5E-17 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03940 51db6967454b16266902d389220bb958 921 Gene3D G3DSA:3.40.50.300 562 673 3.6E-6 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05885 474bac3217213260adfa89d89400f41d 313 Gene3D G3DSA:2.40.30.30 180 308 2.0E-37 T 09-03-2017 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 LS838_RS05885 474bac3217213260adfa89d89400f41d 313 SUPERFAMILY SSF82114 174 308 6.98E-42 T 09-03-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 LS838_RS05885 474bac3217213260adfa89d89400f41d 313 Pfam PF06574 FAD synthetase 17 166 7.1E-41 T 09-03-2017 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LS838_RS05885 474bac3217213260adfa89d89400f41d 313 Pfam PF01687 Riboflavin kinase 184 306 1.3E-31 T 09-03-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 LS838_RS05885 474bac3217213260adfa89d89400f41d 313 SMART SM00904 183 308 7.3E-54 T 09-03-2017 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 LS838_RS05885 474bac3217213260adfa89d89400f41d 313 SUPERFAMILY SSF52374 20 186 3.38E-24 T 09-03-2017 LS838_RS05885 474bac3217213260adfa89d89400f41d 313 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 307 9.1E-77 T 09-03-2017 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LS838_RS05885 474bac3217213260adfa89d89400f41d 313 Gene3D G3DSA:3.40.50.620 15 179 1.6E-51 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS05885 474bac3217213260adfa89d89400f41d 313 PIRSF PIRSF004491 2 313 1.6E-93 T 09-03-2017 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LS838_RS01850 80df6418004c94b994f6191b90ba2f4a 278 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 4.6E-33 T 09-03-2017 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01850 80df6418004c94b994f6191b90ba2f4a 278 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 1.1E-55 T 09-03-2017 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 LS838_RS01850 80df6418004c94b994f6191b90ba2f4a 278 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 3.3E-133 T 09-03-2017 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01850 80df6418004c94b994f6191b90ba2f4a 278 Gene3D G3DSA:4.10.950.10 196 275 8.6E-32 T 09-03-2017 IPR014726 Ribosomal protein L2, domain 3 LS838_RS01850 80df6418004c94b994f6191b90ba2f4a 278 SUPERFAMILY SSF50249 2 125 1.51E-49 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS01850 80df6418004c94b994f6191b90ba2f4a 278 SUPERFAMILY SSF50104 126 272 2.17E-57 T 09-03-2017 IPR008991 Translation protein SH3-like domain LS838_RS01850 80df6418004c94b994f6191b90ba2f4a 278 Gene3D G3DSA:2.30.30.30 119 195 1.1E-34 T 09-03-2017 IPR014722 Ribosomal protein L2 domain 2 LS838_RS01850 80df6418004c94b994f6191b90ba2f4a 278 SMART SM01383 42 118 1.8E-44 T 09-03-2017 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01850 80df6418004c94b994f6191b90ba2f4a 278 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 09-03-2017 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01850 80df6418004c94b994f6191b90ba2f4a 278 SMART SM01382 124 253 1.1E-90 T 09-03-2017 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 LS838_RS01850 80df6418004c94b994f6191b90ba2f4a 278 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 47.301 T 09-03-2017 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01850 80df6418004c94b994f6191b90ba2f4a 278 Gene3D G3DSA:2.40.50.140 2 114 3.1E-51 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS01850 80df6418004c94b994f6191b90ba2f4a 278 PIRSF PIRSF002158 5 277 3.8E-96 T 09-03-2017 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS08745 3f4b442edab1a3731222f441768a41fa 202 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 13 166 1.2E-68 T 09-03-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 LS838_RS08745 3f4b442edab1a3731222f441768a41fa 202 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 13 198 1.0E-95 T 09-03-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 LS838_RS08745 3f4b442edab1a3731222f441768a41fa 202 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 13 197 3.4E-70 T 09-03-2017 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 LS838_RS08745 3f4b442edab1a3731222f441768a41fa 202 SUPERFAMILY SSF51182 12 191 9.0E-68 T 09-03-2017 IPR011051 RmlC-like cupin domain LS838_RS08745 3f4b442edab1a3731222f441768a41fa 202 Gene3D G3DSA:2.60.120.10 4 202 2.1E-81 T 09-03-2017 IPR014710 RmlC-like jelly roll fold LS838_RS00400 81ec3c7c58cce93acb34cef10761d132 516 Pfam PF07282 Putative transposase DNA-binding domain 423 490 4.3E-13 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS08085 72c55d493e897b86ab3bf273eeab3a05 690 Pfam PF00884 Sulfatase 253 546 1.3E-38 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LS838_RS08085 72c55d493e897b86ab3bf273eeab3a05 690 Gene3D G3DSA:3.40.720.10 253 559 5.2E-39 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LS838_RS08085 72c55d493e897b86ab3bf273eeab3a05 690 PIRSF PIRSF005091 1 633 1.2E-178 T 09-03-2017 IPR012160 Lipoteichoic acid synthase-like LS838_RS08085 72c55d493e897b86ab3bf273eeab3a05 690 SUPERFAMILY SSF53649 251 651 4.09E-78 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 48 609 6.2E-125 T 09-03-2017 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 Pfam PF00122 E1-E2 ATPase 87 299 8.5E-60 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 66 609 5.1E-165 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 SUPERFAMILY SSF81653 125 217 9.42E-25 T 09-03-2017 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 89 592 2.5E-75 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 PRINTS PR00941 Cadmium-transporting ATPase signature 202 216 6.8E-6 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 PRINTS PR00941 Cadmium-transporting ATPase signature 183 199 6.8E-6 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 PRINTS PR00941 Cadmium-transporting ATPase signature 101 121 6.8E-6 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 PRINTS PR00941 Cadmium-transporting ATPase signature 47 59 6.8E-6 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 SUPERFAMILY SSF56784 307 327 3.71E-48 T 09-03-2017 IPR023214 HAD-like domain LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 SUPERFAMILY SSF56784 362 607 3.71E-48 T 09-03-2017 IPR023214 HAD-like domain LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 Gene3D G3DSA:2.70.150.10 69 218 5.6E-28 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 Pfam PF00702 haloacid dehalogenase-like hydrolase 305 520 1.6E-33 T 09-03-2017 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 541 1.3E-19 T 09-03-2017 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 506 525 1.3E-19 T 09-03-2017 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 167 181 1.3E-19 T 09-03-2017 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 309 323 1.3E-19 T 09-03-2017 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 SUPERFAMILY SSF81665 70 120 5.23E-11 T 09-03-2017 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 SUPERFAMILY SSF81665 218 303 5.23E-11 T 09-03-2017 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 SUPERFAMILY SSF81665 555 589 5.23E-11 T 09-03-2017 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 Gene3D G3DSA:3.40.1110.10 337 432 4.3E-13 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 311 317 - T 09-03-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 Gene3D G3DSA:3.40.50.1000 433 570 1.6E-44 T 09-03-2017 IPR023214 HAD-like domain LS838_RS02220 c2b92014137e728c70d8256949caa91d 642 Gene3D G3DSA:3.40.50.1000 282 325 1.6E-44 T 09-03-2017 IPR023214 HAD-like domain LS838_RS05080 11bc821d62028e718dee1bd68224a887 245 Gene3D G3DSA:1.10.1660.10 61 115 4.5E-5 T 09-03-2017 LS838_RS05080 11bc821d62028e718dee1bd68224a887 245 SMART SM00422 6 75 5.9E-15 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS05080 11bc821d62028e718dee1bd68224a887 245 SUPERFAMILY SSF46955 6 106 5.13E-20 T 09-03-2017 IPR009061 Putative DNA-binding domain LS838_RS05080 11bc821d62028e718dee1bd68224a887 245 Gene3D G3DSA:1.10.1660.10 3 60 2.5E-18 T 09-03-2017 LS838_RS05080 11bc821d62028e718dee1bd68224a887 245 Pfam PF13411 MerR HTH family regulatory protein 7 72 1.5E-11 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS07700 c96d1acf07b1dd143cc124994b0b9298 311 Gene3D G3DSA:3.40.50.300 1 151 1.0E-19 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07700 c96d1acf07b1dd143cc124994b0b9298 311 SUPERFAMILY SSF52540 1 133 1.76E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07700 c96d1acf07b1dd143cc124994b0b9298 311 Pfam PF13671 AAA domain 4 127 1.7E-8 T 09-03-2017 LS838_RS08525 14bbaf0baf898dc402c9711436ace06b 507 SUPERFAMILY SSF52540 1 272 4.99E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08525 14bbaf0baf898dc402c9711436ace06b 507 Pfam PF13175 AAA ATPase domain 1 93 6.1E-12 T 09-03-2017 LS838_RS08525 14bbaf0baf898dc402c9711436ace06b 507 Gene3D G3DSA:3.40.50.300 1 284 4.2E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04480 394c835c52707492f4aac367bcbc1fb0 1179 SUPERFAMILY SSF52980 789 1006 1.5E-6 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 LS838_RS04480 394c835c52707492f4aac367bcbc1fb0 1179 Gene3D G3DSA:3.40.50.300 303 366 2.8E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04480 394c835c52707492f4aac367bcbc1fb0 1179 SUPERFAMILY SSF52540 304 712 9.14E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04480 394c835c52707492f4aac367bcbc1fb0 1179 Hamap MF_01453 ATP-dependent helicase/deoxyribonuclease subunit B [rexB]. 2 1177 40.9 T 09-03-2017 IPR014141 DNA helicase subunit RexB GO:0016788|GO:0016817 LS838_RS04480 394c835c52707492f4aac367bcbc1fb0 1179 Pfam PF12705 PD-(D/E)XK nuclease superfamily 791 1129 4.1E-28 T 09-03-2017 LS838_RS04680 8487007ae4fef9b9efbbc47d66715c47 382 Pfam PF02595 Glycerate kinase family 5 374 3.4E-142 T 09-03-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LS838_RS04680 8487007ae4fef9b9efbbc47d66715c47 382 SUPERFAMILY SSF110738 3 374 6.54E-133 T 09-03-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LS838_RS04680 8487007ae4fef9b9efbbc47d66715c47 382 PIRSF PIRSF006078 2 379 1.8E-133 T 09-03-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LS838_RS04680 8487007ae4fef9b9efbbc47d66715c47 382 Gene3D G3DSA:3.90.1510.10 43 275 1.0E-94 T 09-03-2017 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 LS838_RS04680 8487007ae4fef9b9efbbc47d66715c47 382 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 3 375 1.5E-150 T 09-03-2017 IPR004381 Glycerate kinase GO:0008887|GO:0031388 LS838_RS08385 cfbe835892b29a21f219631f38ee04a0 195 SUPERFAMILY SSF53474 4 189 5.67E-14 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS08385 cfbe835892b29a21f219631f38ee04a0 195 Gene3D G3DSA:3.40.50.1820 27 190 2.0E-16 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS05965 d0f615c99cdcfc38abf8b21d8ec1b8c6 253 PRINTS PR00395 Ribosomal protein S2 signature 87 104 7.4E-42 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS05965 d0f615c99cdcfc38abf8b21d8ec1b8c6 253 PRINTS PR00395 Ribosomal protein S2 signature 175 186 7.4E-42 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS05965 d0f615c99cdcfc38abf8b21d8ec1b8c6 253 PRINTS PR00395 Ribosomal protein S2 signature 6 24 7.4E-42 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS05965 d0f615c99cdcfc38abf8b21d8ec1b8c6 253 PRINTS PR00395 Ribosomal protein S2 signature 196 210 7.4E-42 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS05965 d0f615c99cdcfc38abf8b21d8ec1b8c6 253 PRINTS PR00395 Ribosomal protein S2 signature 37 46 7.4E-42 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS05965 d0f615c99cdcfc38abf8b21d8ec1b8c6 253 PRINTS PR00395 Ribosomal protein S2 signature 158 175 7.4E-42 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS05965 d0f615c99cdcfc38abf8b21d8ec1b8c6 253 Gene3D G3DSA:1.10.287.610 100 152 2.4E-26 T 09-03-2017 LS838_RS05965 d0f615c99cdcfc38abf8b21d8ec1b8c6 253 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 09-03-2017 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 LS838_RS05965 d0f615c99cdcfc38abf8b21d8ec1b8c6 253 SUPERFAMILY SSF52313 6 228 1.57E-98 T 09-03-2017 IPR023591 Ribosomal protein S2, flavodoxin-like domain LS838_RS05965 d0f615c99cdcfc38abf8b21d8ec1b8c6 253 Pfam PF00318 Ribosomal protein S2 9 224 2.2E-99 T 09-03-2017 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS05965 d0f615c99cdcfc38abf8b21d8ec1b8c6 253 Gene3D G3DSA:3.40.50.10490 23 99 1.7E-69 T 09-03-2017 LS838_RS05965 d0f615c99cdcfc38abf8b21d8ec1b8c6 253 Gene3D G3DSA:3.40.50.10490 158 248 1.7E-69 T 09-03-2017 LS838_RS05965 d0f615c99cdcfc38abf8b21d8ec1b8c6 253 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 09-03-2017 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 LS838_RS05965 d0f615c99cdcfc38abf8b21d8ec1b8c6 253 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 2.4E-109 T 09-03-2017 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 LS838_RS05965 d0f615c99cdcfc38abf8b21d8ec1b8c6 253 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 42.956 T 09-03-2017 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 LS838_RS03850 64bd8f78a01d450a119182162a8529e0 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 1 216 5.6E-79 T 09-03-2017 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 LS838_RS03850 64bd8f78a01d450a119182162a8529e0 225 Hamap MF_00238 Cytidylate kinase [cmk]. 1 221 33.132 T 09-03-2017 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 LS838_RS03850 64bd8f78a01d450a119182162a8529e0 225 Pfam PF02224 Cytidylate kinase 3 218 1.3E-72 T 09-03-2017 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 LS838_RS03850 64bd8f78a01d450a119182162a8529e0 225 Gene3D G3DSA:3.40.50.300 1 217 1.6E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03850 64bd8f78a01d450a119182162a8529e0 225 SUPERFAMILY SSF52540 2 220 2.01E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09075 e1b38d200b59f50970633579ec643166 249 SMART SM00420 6 58 2.3E-20 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LS838_RS09075 e1b38d200b59f50970633579ec643166 249 Gene3D G3DSA:1.10.10.10 5 57 4.2E-7 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS09075 e1b38d200b59f50970633579ec643166 249 Gene3D G3DSA:3.40.50.1360 76 214 1.3E-12 T 09-03-2017 LS838_RS09075 e1b38d200b59f50970633579ec643166 249 SUPERFAMILY SSF46785 4 62 2.06E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS09075 e1b38d200b59f50970633579ec643166 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 6.5E-9 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LS838_RS09075 e1b38d200b59f50970633579ec643166 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 6.5E-9 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LS838_RS09075 e1b38d200b59f50970633579ec643166 249 SMART SM01134 73 231 4.2E-56 T 09-03-2017 LS838_RS09075 e1b38d200b59f50970633579ec643166 249 SUPERFAMILY SSF100950 75 228 5.55E-29 T 09-03-2017 LS838_RS09075 e1b38d200b59f50970633579ec643166 249 Pfam PF00455 DeoR C terminal sensor domain 75 228 5.0E-44 T 09-03-2017 IPR014036 DeoR C-terminal sensor domain LS838_RS09075 e1b38d200b59f50970633579ec643166 249 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 09-03-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LS838_RS09075 e1b38d200b59f50970633579ec643166 249 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 3.4E-17 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LS838_RS00625 e12602a2e6a4c9cabbf856c42ac6637c 110 Gene3D G3DSA:3.20.20.80 35 107 1.3E-17 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS00625 e12602a2e6a4c9cabbf856c42ac6637c 110 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 14 28 - T 09-03-2017 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site LS838_RS00625 e12602a2e6a4c9cabbf856c42ac6637c 110 SUPERFAMILY SSF51445 9 34 5.08E-9 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS00625 e12602a2e6a4c9cabbf856c42ac6637c 110 Pfam PF00232 Glycosyl hydrolase family 1 7 34 2.2E-8 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LS838_RS00625 e12602a2e6a4c9cabbf856c42ac6637c 110 Pfam PF00232 Glycosyl hydrolase family 1 35 105 1.7E-11 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LS838_RS00625 e12602a2e6a4c9cabbf856c42ac6637c 110 Gene3D G3DSA:3.20.20.80 3 34 7.4E-9 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS00625 e12602a2e6a4c9cabbf856c42ac6637c 110 SUPERFAMILY SSF51445 31 106 1.93E-20 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS08440 03003c4f9ede37070f4b7a5c721e8102 185 Gene3D G3DSA:2.40.50.140 64 126 2.0E-22 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS08440 03003c4f9ede37070f4b7a5c721e8102 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 59 2.8E-19 T 09-03-2017 IPR013185 Translation elongation factor, KOW-like LS838_RS08440 03003c4f9ede37070f4b7a5c721e8102 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 4.9E-22 T 09-03-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 LS838_RS08440 03003c4f9ede37070f4b7a5c721e8102 185 SUPERFAMILY SSF50249 128 185 1.37E-16 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS08440 03003c4f9ede37070f4b7a5c721e8102 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 67 117 2.7E-19 T 09-03-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 LS838_RS08440 03003c4f9ede37070f4b7a5c721e8102 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 41.451 T 09-03-2017 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 LS838_RS08440 03003c4f9ede37070f4b7a5c721e8102 185 SUPERFAMILY SSF50249 66 129 1.03E-15 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS08440 03003c4f9ede37070f4b7a5c721e8102 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 09-03-2017 IPR013852 Translation elongation factor P/YeiP, conserved site LS838_RS08440 03003c4f9ede37070f4b7a5c721e8102 185 Gene3D G3DSA:2.30.30.30 2 62 5.5E-18 T 09-03-2017 IPR014722 Ribosomal protein L2 domain 2 LS838_RS08440 03003c4f9ede37070f4b7a5c721e8102 185 PIRSF PIRSF005901 1 185 7.0E-61 T 09-03-2017 IPR020599 Translation elongation factor P/YeiP LS838_RS08440 03003c4f9ede37070f4b7a5c721e8102 185 SMART SM01185 66 121 2.4E-23 T 09-03-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 LS838_RS08440 03003c4f9ede37070f4b7a5c721e8102 185 SMART SM00841 129 184 5.3E-29 T 09-03-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 LS838_RS08440 03003c4f9ede37070f4b7a5c721e8102 185 Gene3D G3DSA:2.40.50.140 128 185 2.2E-24 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS08440 03003c4f9ede37070f4b7a5c721e8102 185 SUPERFAMILY SSF50104 2 62 9.63E-15 T 09-03-2017 IPR008991 Translation protein SH3-like domain LS838_RS08440 03003c4f9ede37070f4b7a5c721e8102 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 185 2.2E-64 T 09-03-2017 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 LS838_RS00125 660e857eb6fbcf8582ee6c1baf3cd440 524 SUPERFAMILY SSF90123 5 289 2.62E-35 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS00125 660e857eb6fbcf8582ee6c1baf3cd440 524 Pfam PF00005 ABC transporter 338 479 8.6E-25 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS00125 660e857eb6fbcf8582ee6c1baf3cd440 524 SMART SM00382 343 524 4.6E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS00125 660e857eb6fbcf8582ee6c1baf3cd440 524 Gene3D G3DSA:3.40.50.300 320 510 1.1E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00125 660e857eb6fbcf8582ee6c1baf3cd440 524 Pfam PF00664 ABC transporter transmembrane region 16 279 1.4E-19 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS00125 660e857eb6fbcf8582ee6c1baf3cd440 524 Gene3D G3DSA:1.20.1560.10 5 302 3.2E-29 T 09-03-2017 LS838_RS00125 660e857eb6fbcf8582ee6c1baf3cd440 524 SUPERFAMILY SSF52540 317 520 2.21E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08040 34828c32d93328a36e9dc1f800949709 164 Gene3D G3DSA:3.40.630.30 19 161 1.6E-32 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS08040 34828c32d93328a36e9dc1f800949709 164 Pfam PF13673 Acetyltransferase (GNAT) domain 62 163 2.2E-19 T 09-03-2017 IPR000182 GNAT domain GO:0008080 LS838_RS08040 34828c32d93328a36e9dc1f800949709 164 SUPERFAMILY SSF55729 21 163 4.01E-28 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS03050 fb3a71dc70c55f06b71311f673f9ffa5 175 Pfam PF01625 Peptide methionine sulfoxide reductase 8 158 3.9E-61 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 LS838_RS03050 fb3a71dc70c55f06b71311f673f9ffa5 175 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 7 157 6.5E-62 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 LS838_RS03050 fb3a71dc70c55f06b71311f673f9ffa5 175 SUPERFAMILY SSF55068 3 159 3.4E-71 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 LS838_RS03050 fb3a71dc70c55f06b71311f673f9ffa5 175 Gene3D G3DSA:3.30.1060.10 2 157 7.6E-70 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 LS838_RS03050 fb3a71dc70c55f06b71311f673f9ffa5 175 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 5 164 37.007 T 09-03-2017 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 LS838_RS05985 fa64f95e97a770dc312306bb9a1019f7 446 Pfam PF00696 Amino acid kinase family 5 263 1.4E-32 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase LS838_RS05985 fa64f95e97a770dc312306bb9a1019f7 446 PIRSF PIRSF000726 2 446 3.3E-70 T 09-03-2017 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LS838_RS05985 fa64f95e97a770dc312306bb9a1019f7 446 SUPERFAMILY SSF53633 4 277 2.36E-59 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase LS838_RS05985 fa64f95e97a770dc312306bb9a1019f7 446 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 5 439 3.4E-72 T 09-03-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LS838_RS05985 fa64f95e97a770dc312306bb9a1019f7 446 SUPERFAMILY SSF55021 288 361 5.31E-10 T 09-03-2017 LS838_RS05985 fa64f95e97a770dc312306bb9a1019f7 446 Gene3D G3DSA:3.40.1160.10 5 48 2.2E-46 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase LS838_RS05985 fa64f95e97a770dc312306bb9a1019f7 446 Gene3D G3DSA:3.40.1160.10 99 280 2.2E-46 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase LS838_RS05985 fa64f95e97a770dc312306bb9a1019f7 446 SUPERFAMILY SSF55021 363 441 3.05E-18 T 09-03-2017 LS838_RS09365 a31493a303be3d778c1554fc75a97e9f 222 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 7 201 7.5E-38 T 09-03-2017 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 LS838_RS09365 a31493a303be3d778c1554fc75a97e9f 222 SUPERFAMILY SSF52317 21 195 2.29E-24 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS09365 a31493a303be3d778c1554fc75a97e9f 222 Gene3D G3DSA:3.40.50.880 19 196 2.3E-13 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS02390 4099c9fd5500455aceedac0e76e24bf9 222 SUPERFAMILY SSF161098 15 206 1.96E-44 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS02390 4099c9fd5500455aceedac0e76e24bf9 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 114 8.1E-28 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LS838_RS02390 4099c9fd5500455aceedac0e76e24bf9 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 54 221 2.8E-20 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS02390 4099c9fd5500455aceedac0e76e24bf9 222 Gene3D G3DSA:1.10.3720.10 15 221 1.9E-49 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS07015 6e281082bc827a107b02a43f0fa2872b 201 Pfam PF07314 Protein of unknown function (DUF1461) 13 179 1.1E-40 T 09-03-2017 IPR010178 Integral membrane protein 1906 LS838_RS07015 6e281082bc827a107b02a43f0fa2872b 201 TIGRFAM TIGR01906 integ_TIGR01906: integral membrane protein TIGR01906 12 184 6.0E-32 T 09-03-2017 IPR010178 Integral membrane protein 1906 LS838_RS02760 027d7b7df1135a14382637d57cb405e1 399 Pfam PF00953 Glycosyl transferase family 4 75 234 1.4E-42 T 09-03-2017 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 LS838_RS02760 027d7b7df1135a14382637d57cb405e1 399 ProSitePatterns PS01348 MraY family signature 2. 152 163 - T 09-03-2017 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 LS838_RS07300 a10cec81f6fcb0407d99dbaec96c06a9 315 Gene3D G3DSA:3.20.20.300 22 310 3.3E-57 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LS838_RS07300 a10cec81f6fcb0407d99dbaec96c06a9 315 SUPERFAMILY SSF51445 24 310 2.74E-47 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS07300 a10cec81f6fcb0407d99dbaec96c06a9 315 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 4 309 2.3E-44 T 09-03-2017 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 LS838_RS04305 adf3419d4b458c7b0b98fa3138fcd768 164 SUPERFAMILY SSF141868 2 162 2.48E-37 T 09-03-2017 IPR001633 EAL domain LS838_RS04305 adf3419d4b458c7b0b98fa3138fcd768 164 SMART SM00052 1 164 1.5E-8 T 09-03-2017 IPR001633 EAL domain LS838_RS04305 adf3419d4b458c7b0b98fa3138fcd768 164 Pfam PF00563 EAL domain 2 162 2.5E-32 T 09-03-2017 IPR001633 EAL domain LS838_RS04305 adf3419d4b458c7b0b98fa3138fcd768 164 Gene3D G3DSA:3.20.20.450 2 160 6.2E-40 T 09-03-2017 IPR001633 EAL domain LS838_RS07135 c57c131a3871e7b240d5cf2f89dc821c 336 Gene3D G3DSA:1.10.8.60 185 257 1.6E-31 T 09-03-2017 LS838_RS07135 c57c131a3871e7b240d5cf2f89dc821c 336 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 329 1.0E-30 T 09-03-2017 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 LS838_RS07135 c57c131a3871e7b240d5cf2f89dc821c 336 Gene3D G3DSA:3.40.50.300 22 177 2.4E-31 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07135 c57c131a3871e7b240d5cf2f89dc821c 336 SUPERFAMILY SSF46785 259 332 3.61E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS07135 c57c131a3871e7b240d5cf2f89dc821c 336 SUPERFAMILY SSF52540 22 254 7.71E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07135 c57c131a3871e7b240d5cf2f89dc821c 336 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 26 328 2.6E-135 T 09-03-2017 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 LS838_RS07135 c57c131a3871e7b240d5cf2f89dc821c 336 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 255 328 1.5E-31 T 09-03-2017 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 LS838_RS07135 c57c131a3871e7b240d5cf2f89dc821c 336 SMART SM00382 53 184 1.3E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS07135 c57c131a3871e7b240d5cf2f89dc821c 336 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 237 2.7E-111 T 09-03-2017 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 LS838_RS07135 c57c131a3871e7b240d5cf2f89dc821c 336 Gene3D G3DSA:1.10.10.10 259 329 1.8E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS07135 c57c131a3871e7b240d5cf2f89dc821c 336 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 336 158.911 T 09-03-2017 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 LS838_RS06020 4d2a16509bd619fe8bdc7389f2a2f5a2 206 Gene3D G3DSA:2.10.109.10 83 202 3.0E-43 T 09-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain LS838_RS06020 4d2a16509bd619fe8bdc7389f2a2f5a2 206 Pfam PF00717 Peptidase S24-like 122 190 5.6E-17 T 09-03-2017 IPR019759 Peptidase S24/S26A/S26B LS838_RS06020 4d2a16509bd619fe8bdc7389f2a2f5a2 206 SUPERFAMILY SSF46785 6 70 2.95E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS06020 4d2a16509bd619fe8bdc7389f2a2f5a2 206 SUPERFAMILY SSF51306 82 202 1.44E-35 T 09-03-2017 IPR015927 Peptidase S24/S26A/S26B/S26C LS838_RS06020 4d2a16509bd619fe8bdc7389f2a2f5a2 206 Hamap MF_00015 LexA repressor [lexA]. 3 204 32.13 T 09-03-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 LS838_RS06020 4d2a16509bd619fe8bdc7389f2a2f5a2 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 130 141 6.9E-10 T 09-03-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LS838_RS06020 4d2a16509bd619fe8bdc7389f2a2f5a2 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 159 171 6.9E-10 T 09-03-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LS838_RS06020 4d2a16509bd619fe8bdc7389f2a2f5a2 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 119 129 6.9E-10 T 09-03-2017 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 LS838_RS06020 4d2a16509bd619fe8bdc7389f2a2f5a2 206 Pfam PF01726 LexA DNA binding domain 6 65 7.2E-21 T 09-03-2017 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 LS838_RS06020 4d2a16509bd619fe8bdc7389f2a2f5a2 206 Gene3D G3DSA:1.10.10.10 3 69 2.4E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS06020 4d2a16509bd619fe8bdc7389f2a2f5a2 206 TIGRFAM TIGR00498 lexA: repressor LexA 6 204 1.3E-70 T 09-03-2017 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 LS838_RS01495 40a182ee5f730f81b8499abcdeb6d090 266 Pfam PF04397 LytTr DNA-binding domain 168 255 2.7E-12 T 09-03-2017 IPR007492 LytTR DNA-binding domain GO:0003677 LS838_RS01495 40a182ee5f730f81b8499abcdeb6d090 266 Gene3D G3DSA:2.40.50.40 156 223 3.5E-7 T 09-03-2017 LS838_RS01495 40a182ee5f730f81b8499abcdeb6d090 266 SMART SM00448 6 136 1.5E-4 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LS838_RS01495 40a182ee5f730f81b8499abcdeb6d090 266 Gene3D G3DSA:3.40.50.2300 5 141 3.8E-14 T 09-03-2017 LS838_RS01495 40a182ee5f730f81b8499abcdeb6d090 266 SMART SM00850 164 258 4.6E-9 T 09-03-2017 IPR007492 LytTR DNA-binding domain GO:0003677 LS838_RS01495 40a182ee5f730f81b8499abcdeb6d090 266 Pfam PF00072 Response regulator receiver domain 49 136 4.8E-8 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LS838_RS01495 40a182ee5f730f81b8499abcdeb6d090 266 SUPERFAMILY SSF52172 6 144 1.57E-10 T 09-03-2017 IPR011006 CheY-like superfamily LS838_RS05905 ca2303064b60dfc99b68565ede8afea4 103 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 6 94 4.5E-13 T 09-03-2017 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 LS838_RS05905 ca2303064b60dfc99b68565ede8afea4 103 SUPERFAMILY SSF55315 5 100 1.96E-22 T 09-03-2017 IPR029064 50S ribosomal protein L30e-like LS838_RS05905 ca2303064b60dfc99b68565ede8afea4 103 Gene3D G3DSA:3.30.1330.30 3 96 4.2E-20 T 09-03-2017 IPR029064 50S ribosomal protein L30e-like LS838_RS01100 76d2b94bbe8e3d5b6d84bb44d8cb795f 540 Gene3D G3DSA:3.10.105.10 290 510 1.8E-52 T 09-03-2017 LS838_RS01100 76d2b94bbe8e3d5b6d84bb44d8cb795f 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 460 2.9E-78 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain LS838_RS01100 76d2b94bbe8e3d5b6d84bb44d8cb795f 540 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 82 104 - T 09-03-2017 IPR023765 Solute-binding protein family 5, conserved site LS838_RS01100 76d2b94bbe8e3d5b6d84bb44d8cb795f 540 PIRSF PIRSF002741 1 540 4.4E-98 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LS838_RS01100 76d2b94bbe8e3d5b6d84bb44d8cb795f 540 SUPERFAMILY SSF53850 29 536 6.02E-121 T 09-03-2017 LS838_RS01100 76d2b94bbe8e3d5b6d84bb44d8cb795f 540 Gene3D G3DSA:3.90.76.10 46 217 1.5E-45 T 09-03-2017 LS838_RS02150 3a8ebdb837f769a5084ffc29c021c0cd 753 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 7 751 0.0 T 09-03-2017 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 LS838_RS02150 3a8ebdb837f769a5084ffc29c021c0cd 753 SUPERFAMILY SSF52540 6 651 1.48E-178 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02150 3a8ebdb837f769a5084ffc29c021c0cd 753 Gene3D G3DSA:3.40.50.300 287 389 8.8E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02150 3a8ebdb837f769a5084ffc29c021c0cd 753 Gene3D G3DSA:3.40.50.300 559 652 8.8E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02150 3a8ebdb837f769a5084ffc29c021c0cd 753 Gene3D G3DSA:1.10.10.160 115 191 2.0E-24 T 09-03-2017 IPR013986 DExx box DNA helicase domain LS838_RS02150 3a8ebdb837f769a5084ffc29c021c0cd 753 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 273 5.1E-79 T 09-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LS838_RS02150 3a8ebdb837f769a5084ffc29c021c0cd 753 Gene3D G3DSA:3.40.50.300 5 110 7.0E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02150 3a8ebdb837f769a5084ffc29c021c0cd 753 Gene3D G3DSA:3.40.50.300 192 286 7.0E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02150 3a8ebdb837f769a5084ffc29c021c0cd 753 Gene3D G3DSA:1.10.486.10 390 547 2.4E-44 T 09-03-2017 LS838_RS02150 3a8ebdb837f769a5084ffc29c021c0cd 753 Pfam PF13361 UvrD-like helicase C-terminal domain 278 623 3.5E-78 T 09-03-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 LS838_RS06040 365fef195df6536a382b6d74f3698302 744 Gene3D G3DSA:3.40.50.300 16 196 1.1E-31 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06040 365fef195df6536a382b6d74f3698302 744 SUPERFAMILY SSF52540 242 384 2.59E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06040 365fef195df6536a382b6d74f3698302 744 SUPERFAMILY SSF52540 34 196 2.59E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06040 365fef195df6536a382b6d74f3698302 744 Pfam PF00271 Helicase conserved C-terminal domain 269 375 8.4E-13 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS06040 365fef195df6536a382b6d74f3698302 744 SMART SM00490 291 375 1.0E-8 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS06040 365fef195df6536a382b6d74f3698302 744 Pfam PF00270 DEAD/DEAH box helicase 26 194 4.7E-23 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LS838_RS06040 365fef195df6536a382b6d74f3698302 744 SMART SM00487 19 222 8.4E-26 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LS838_RS06040 365fef195df6536a382b6d74f3698302 744 Gene3D G3DSA:3.40.50.300 264 381 2.0E-21 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09230 a6e623a01f52ab55ba2499099dd14d50 467 SUPERFAMILY SSF56176 28 219 1.92E-58 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LS838_RS09230 a6e623a01f52ab55ba2499099dd14d50 467 Gene3D G3DSA:1.10.45.10 424 463 3.6E-9 T 09-03-2017 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 LS838_RS09230 a6e623a01f52ab55ba2499099dd14d50 467 SUPERFAMILY SSF55103 225 465 2.78E-52 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 LS838_RS09230 a6e623a01f52ab55ba2499099dd14d50 467 Gene3D G3DSA:3.30.43.10 5 98 4.0E-21 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LS838_RS09230 a6e623a01f52ab55ba2499099dd14d50 467 Pfam PF02913 FAD linked oxidases, C-terminal domain 219 463 1.3E-50 T 09-03-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 LS838_RS09230 a6e623a01f52ab55ba2499099dd14d50 467 Gene3D G3DSA:3.30.465.10 99 219 3.9E-35 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LS838_RS09230 a6e623a01f52ab55ba2499099dd14d50 467 Pfam PF01565 FAD binding domain 44 181 3.4E-36 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 LS838_RS02945 3a5d55e387c37b12980bea8bbc8f9579 297 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 196 294 3.7E-26 T 09-03-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS02945 3a5d55e387c37b12980bea8bbc8f9579 297 Gene3D G3DSA:3.30.465.10 84 220 2.3E-50 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LS838_RS02945 3a5d55e387c37b12980bea8bbc8f9579 297 Gene3D G3DSA:3.90.78.10 221 296 1.6E-30 T 09-03-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS02945 3a5d55e387c37b12980bea8bbc8f9579 297 SUPERFAMILY SSF56194 191 296 7.46E-36 T 09-03-2017 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS02945 3a5d55e387c37b12980bea8bbc8f9579 297 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 20 295 1.1E-71 T 09-03-2017 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS02945 3a5d55e387c37b12980bea8bbc8f9579 297 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 297 94.795 T 09-03-2017 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS02945 3a5d55e387c37b12980bea8bbc8f9579 297 Gene3D G3DSA:3.30.43.10 12 83 5.9E-24 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LS838_RS02945 3a5d55e387c37b12980bea8bbc8f9579 297 SUPERFAMILY SSF56176 12 188 1.38E-46 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LS838_RS02945 3a5d55e387c37b12980bea8bbc8f9579 297 Pfam PF01565 FAD binding domain 32 159 3.0E-26 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 LS838_RS07260 e8d2f92273329b9d5b0d13e18488d02a 176 Gene3D G3DSA:3.40.50.2020 2 168 7.6E-49 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS07260 e8d2f92273329b9d5b0d13e18488d02a 176 SUPERFAMILY SSF53271 2 168 1.97E-41 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS07260 e8d2f92273329b9d5b0d13e18488d02a 176 Pfam PF00156 Phosphoribosyl transferase domain 3 159 4.6E-24 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 LS838_RS07260 e8d2f92273329b9d5b0d13e18488d02a 176 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 2 175 36.426 T 09-03-2017 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 Pfam PF00702 haloacid dehalogenase-like hydrolase 288 521 6.1E-27 T 09-03-2017 LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 Gene3D G3DSA:1.20.1110.10 477 744 1.3E-60 T 09-03-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 Gene3D G3DSA:1.20.1110.10 39 90 1.3E-60 T 09-03-2017 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 Pfam PF00122 E1-E2 ATPase 64 281 5.1E-50 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 480 594 1.1E-24 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 65 462 7.3E-47 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 293 299 - T 09-03-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 531 543 7.0E-27 T 09-03-2017 LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 437 447 7.0E-27 T 09-03-2017 LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 291 305 7.0E-27 T 09-03-2017 LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 508 527 7.0E-27 T 09-03-2017 LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 142 156 7.0E-27 T 09-03-2017 LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 SMART SM00831 1 58 3.3E-6 T 09-03-2017 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 SUPERFAMILY SSF81665 4 96 1.44E-54 T 09-03-2017 LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 SUPERFAMILY SSF81665 192 285 1.44E-54 T 09-03-2017 LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 SUPERFAMILY SSF81665 557 743 1.44E-54 T 09-03-2017 LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 Pfam PF00690 Cation transporter/ATPase, N-terminus 4 52 9.9E-9 T 09-03-2017 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 SUPERFAMILY SSF56784 289 309 3.52E-36 T 09-03-2017 IPR023214 HAD-like domain LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 SUPERFAMILY SSF56784 358 608 3.52E-36 T 09-03-2017 IPR023214 HAD-like domain LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 Gene3D G3DSA:2.70.150.10 91 192 2.4E-34 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 Gene3D G3DSA:2.70.150.10 4 38 2.4E-34 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LS838_RS05815 e9a3665993aca5e018fa1546c425d73a 752 SUPERFAMILY SSF81653 96 192 2.48E-24 T 09-03-2017 LS838_RS04135 02866b693d010ccfe18ab8b6b52812a5 255 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 3 94 2.4E-29 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LS838_RS04135 02866b693d010ccfe18ab8b6b52812a5 255 SUPERFAMILY SSF52096 4 254 8.5E-68 T 09-03-2017 IPR029045 ClpP/crotonase-like domain LS838_RS04135 02866b693d010ccfe18ab8b6b52812a5 255 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 81 97 1.9E-32 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LS838_RS04135 02866b693d010ccfe18ab8b6b52812a5 255 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 144 153 1.9E-32 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LS838_RS04135 02866b693d010ccfe18ab8b6b52812a5 255 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 100 113 1.9E-32 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LS838_RS04135 02866b693d010ccfe18ab8b6b52812a5 255 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 129 1.9E-32 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LS838_RS04135 02866b693d010ccfe18ab8b6b52812a5 255 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 35 46 1.9E-32 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LS838_RS04135 02866b693d010ccfe18ab8b6b52812a5 255 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 60 78 1.9E-32 T 09-03-2017 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 LS838_RS04135 02866b693d010ccfe18ab8b6b52812a5 255 Gene3D G3DSA:3.90.226.10 3 217 2.7E-41 T 09-03-2017 IPR029045 ClpP/crotonase-like domain LS838_RS00780 fb96429d78679f03b7c7078867c25a78 282 SUPERFAMILY SSF46689 225 274 2.02E-8 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS00780 fb96429d78679f03b7c7078867c25a78 282 Gene3D G3DSA:1.10.10.60 177 221 5.2E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS00780 fb96429d78679f03b7c7078867c25a78 282 SMART SM00342 188 271 1.8E-12 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LS838_RS00780 fb96429d78679f03b7c7078867c25a78 282 SUPERFAMILY SSF51215 51 164 1.31E-5 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LS838_RS00780 fb96429d78679f03b7c7078867c25a78 282 Gene3D G3DSA:2.60.120.280 51 167 2.2E-5 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LS838_RS00780 fb96429d78679f03b7c7078867c25a78 282 Gene3D G3DSA:1.10.10.60 224 273 1.8E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS00780 fb96429d78679f03b7c7078867c25a78 282 Pfam PF12833 Helix-turn-helix domain 195 272 2.0E-14 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LS838_RS07110 edc3408bc46e7f8dc4b3041cd9e809ee 453 Pfam PF00271 Helicase conserved C-terminal domain 232 339 2.4E-27 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS07110 edc3408bc46e7f8dc4b3041cd9e809ee 453 SMART SM00487 22 227 1.9E-51 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LS838_RS07110 edc3408bc46e7f8dc4b3041cd9e809ee 453 Gene3D G3DSA:3.40.50.300 5 206 1.9E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07110 edc3408bc46e7f8dc4b3041cd9e809ee 453 Pfam PF00270 DEAD/DEAH box helicase 27 192 8.2E-40 T 09-03-2017 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 LS838_RS07110 edc3408bc46e7f8dc4b3041cd9e809ee 453 Gene3D G3DSA:3.40.50.300 207 361 3.2E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07110 edc3408bc46e7f8dc4b3041cd9e809ee 453 SMART SM00490 258 339 1.1E-30 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS07110 edc3408bc46e7f8dc4b3041cd9e809ee 453 SUPERFAMILY SSF52540 33 351 3.83E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01935 ac48d65b5bdca4085bdeef7f0193d9d4 431 SUPERFAMILY SSF103491 1 421 1.83E-116 T 09-03-2017 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 LS838_RS01935 ac48d65b5bdca4085bdeef7f0193d9d4 431 ProSitePatterns PS00755 Protein secY signature 1. 68 87 - T 09-03-2017 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 LS838_RS01935 ac48d65b5bdca4085bdeef7f0193d9d4 431 Pfam PF00344 SecY translocase 68 413 9.7E-99 T 09-03-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 LS838_RS01935 ac48d65b5bdca4085bdeef7f0193d9d4 431 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 426 4.0E-129 T 09-03-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 LS838_RS01935 ac48d65b5bdca4085bdeef7f0193d9d4 431 ProSitePatterns PS00756 Protein secY signature 2. 165 182 - T 09-03-2017 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 LS838_RS01935 ac48d65b5bdca4085bdeef7f0193d9d4 431 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 430 26.772 T 09-03-2017 IPR026593 Protein translocase subunit SecY LS838_RS01935 ac48d65b5bdca4085bdeef7f0193d9d4 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 146 171 8.3E-88 T 09-03-2017 LS838_RS01935 ac48d65b5bdca4085bdeef7f0193d9d4 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 8.3E-88 T 09-03-2017 LS838_RS01935 ac48d65b5bdca4085bdeef7f0193d9d4 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 399 417 8.3E-88 T 09-03-2017 LS838_RS01935 ac48d65b5bdca4085bdeef7f0193d9d4 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 266 285 8.3E-88 T 09-03-2017 LS838_RS01935 ac48d65b5bdca4085bdeef7f0193d9d4 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 8.3E-88 T 09-03-2017 LS838_RS01935 ac48d65b5bdca4085bdeef7f0193d9d4 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 67 87 8.3E-88 T 09-03-2017 LS838_RS01935 ac48d65b5bdca4085bdeef7f0193d9d4 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 8.3E-88 T 09-03-2017 LS838_RS01935 ac48d65b5bdca4085bdeef7f0193d9d4 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 172 195 8.3E-88 T 09-03-2017 LS838_RS01935 ac48d65b5bdca4085bdeef7f0193d9d4 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 8.3E-88 T 09-03-2017 LS838_RS01935 ac48d65b5bdca4085bdeef7f0193d9d4 431 Gene3D G3DSA:1.10.3370.10 1 430 2.8E-136 T 09-03-2017 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 LS838_RS01935 ac48d65b5bdca4085bdeef7f0193d9d4 431 PIRSF PIRSF004557 1 431 2.0E-118 T 09-03-2017 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 LS838_RS07180 30ad96dd29f82c69f66283c86d008e44 176 SUPERFAMILY SSF55729 25 159 2.83E-24 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS07180 30ad96dd29f82c69f66283c86d008e44 176 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 36 159 1.4E-30 T 09-03-2017 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 LS838_RS07180 30ad96dd29f82c69f66283c86d008e44 176 Pfam PF00583 Acetyltransferase (GNAT) family 74 146 1.1E-14 T 09-03-2017 IPR000182 GNAT domain GO:0008080 LS838_RS07180 30ad96dd29f82c69f66283c86d008e44 176 Gene3D G3DSA:3.40.630.30 30 173 3.3E-27 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS04315 2b12f88c80b61bbea5b18ebcc5fe1a30 294 SUPERFAMILY SSF53850 37 278 2.4E-65 T 09-03-2017 LS838_RS04315 2b12f88c80b61bbea5b18ebcc5fe1a30 294 Pfam PF12849 PBP superfamily domain 31 268 6.9E-34 T 09-03-2017 IPR024370 PBP domain LS838_RS04315 2b12f88c80b61bbea5b18ebcc5fe1a30 294 Gene3D G3DSA:3.40.190.10 124 242 3.9E-39 T 09-03-2017 LS838_RS04315 2b12f88c80b61bbea5b18ebcc5fe1a30 294 Gene3D G3DSA:3.40.190.10 4 123 4.3E-13 T 09-03-2017 LS838_RS04315 2b12f88c80b61bbea5b18ebcc5fe1a30 294 Gene3D G3DSA:3.40.190.10 243 282 4.3E-13 T 09-03-2017 LS838_RS04315 2b12f88c80b61bbea5b18ebcc5fe1a30 294 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 5 278 5.2E-73 T 09-03-2017 IPR011862 Phosphate binding protein GO:0006810 LS838_RS04670 0a7e525dc7b14955124bce6695c39f98 427 Hamap MF_00220_B Dihydroorotase [pyrC]. 2 423 44.941 T 09-03-2017 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 LS838_RS04670 0a7e525dc7b14955124bce6695c39f98 427 Pfam PF01979 Amidohydrolase family 50 419 3.8E-54 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 LS838_RS04670 0a7e525dc7b14955124bce6695c39f98 427 Gene3D G3DSA:3.20.20.140 67 382 1.1E-106 T 09-03-2017 LS838_RS04670 0a7e525dc7b14955124bce6695c39f98 427 Gene3D G3DSA:2.30.40.10 3 66 4.6E-20 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LS838_RS04670 0a7e525dc7b14955124bce6695c39f98 427 SUPERFAMILY SSF51338 365 424 1.19E-25 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LS838_RS04670 0a7e525dc7b14955124bce6695c39f98 427 SUPERFAMILY SSF51338 1 52 1.19E-25 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LS838_RS04670 0a7e525dc7b14955124bce6695c39f98 427 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 14 422 3.3E-126 T 09-03-2017 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 LS838_RS04670 0a7e525dc7b14955124bce6695c39f98 427 SUPERFAMILY SSF51556 53 365 9.43E-103 T 09-03-2017 IPR032466 Metal-dependent hydrolase LS838_RS04670 0a7e525dc7b14955124bce6695c39f98 427 ProSitePatterns PS00483 Dihydroorotase signature 2. 301 312 - T 09-03-2017 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 LS838_RS02385 da84edc0f53cec9a689df005bff59552 213 Gene3D G3DSA:1.10.3720.10 8 211 1.9E-54 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS02385 da84edc0f53cec9a689df005bff59552 213 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 107 1.7E-23 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LS838_RS02385 da84edc0f53cec9a689df005bff59552 213 SUPERFAMILY SSF161098 9 201 1.7E-48 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS02385 da84edc0f53cec9a689df005bff59552 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 211 5.5E-24 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS05340 2ef9608e0e784516dd8f40bc536ea5ab 303 Gene3D G3DSA:3.30.2010.10 68 156 1.1E-29 T 09-03-2017 LS838_RS05340 2ef9608e0e784516dd8f40bc536ea5ab 303 Hamap MF_00188 Protease HtpX [htpX]. 10 298 23.481 T 09-03-2017 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 LS838_RS05340 2ef9608e0e784516dd8f40bc536ea5ab 303 Pfam PF01435 Peptidase family M48 77 298 1.4E-30 T 09-03-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 LS838_RS03620 0136f66c61dfeb74e17bba343aed74ea 286 Gene3D G3DSA:3.40.190.10 45 169 1.2E-51 T 09-03-2017 LS838_RS03620 0136f66c61dfeb74e17bba343aed74ea 286 PIRSF PIRSF002854 3 283 6.0E-87 T 09-03-2017 IPR004872 Lipoprotein NlpA family LS838_RS03620 0136f66c61dfeb74e17bba343aed74ea 286 SUPERFAMILY SSF53850 40 285 6.18E-73 T 09-03-2017 LS838_RS03620 0136f66c61dfeb74e17bba343aed74ea 286 Pfam PF03180 NLPA lipoprotein 45 282 7.6E-86 T 09-03-2017 IPR004872 Lipoprotein NlpA family LS838_RS06560 40d8c99464b731429e7e343bf4692b66 162 SUPERFAMILY SSF46557 5 78 8.24E-24 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LS838_RS06560 40d8c99464b731429e7e343bf4692b66 162 Gene3D G3DSA:3.10.50.30 78 154 1.8E-23 T 09-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LS838_RS06560 40d8c99464b731429e7e343bf4692b66 162 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 85 154 1.9E-22 T 09-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LS838_RS06560 40d8c99464b731429e7e343bf4692b66 162 Pfam PF03449 Transcription elongation factor, N-terminal 8 76 1.4E-25 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LS838_RS06560 40d8c99464b731429e7e343bf4692b66 162 SUPERFAMILY SSF54534 82 154 8.83E-17 T 09-03-2017 LS838_RS06560 40d8c99464b731429e7e343bf4692b66 162 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 154 5.4E-52 T 09-03-2017 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 LS838_RS06560 40d8c99464b731429e7e343bf4692b66 162 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 19 50 - T 09-03-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 LS838_RS06560 40d8c99464b731429e7e343bf4692b66 162 Hamap MF_00105 Transcription elongation factor GreA [greA]. 4 159 28.622 T 09-03-2017 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 LS838_RS06560 40d8c99464b731429e7e343bf4692b66 162 PIRSF PIRSF006092 1 158 1.2E-46 T 09-03-2017 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 LS838_RS06560 40d8c99464b731429e7e343bf4692b66 162 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 122 138 - T 09-03-2017 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 LS838_RS06560 40d8c99464b731429e7e343bf4692b66 162 Gene3D G3DSA:1.10.287.180 4 77 6.3E-27 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LS838_RS06290 b4f32069a3ac9307502bf983bc487a93 188 Gene3D G3DSA:2.30.30.30 1 65 7.4E-32 T 09-03-2017 IPR014722 Ribosomal protein L2 domain 2 LS838_RS06290 b4f32069a3ac9307502bf983bc487a93 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 4.6E-26 T 09-03-2017 IPR013185 Translation elongation factor, KOW-like LS838_RS06290 b4f32069a3ac9307502bf983bc487a93 188 SMART SM00841 131 186 1.6E-32 T 09-03-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 LS838_RS06290 b4f32069a3ac9307502bf983bc487a93 188 Gene3D G3DSA:2.40.50.140 66 129 5.5E-27 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS06290 b4f32069a3ac9307502bf983bc487a93 188 Gene3D G3DSA:2.40.50.140 130 186 5.9E-27 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS06290 b4f32069a3ac9307502bf983bc487a93 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.2E-24 T 09-03-2017 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 LS838_RS06290 b4f32069a3ac9307502bf983bc487a93 188 SUPERFAMILY SSF50104 3 65 1.75E-21 T 09-03-2017 IPR008991 Translation protein SH3-like domain LS838_RS06290 b4f32069a3ac9307502bf983bc487a93 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 09-03-2017 IPR013852 Translation elongation factor P/YeiP, conserved site LS838_RS06290 b4f32069a3ac9307502bf983bc487a93 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.417 T 09-03-2017 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 LS838_RS06290 b4f32069a3ac9307502bf983bc487a93 188 SUPERFAMILY SSF50249 67 131 1.54E-19 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS06290 b4f32069a3ac9307502bf983bc487a93 188 TIGRFAM TIGR00038 efp: translation elongation factor P 4 186 8.6E-79 T 09-03-2017 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 LS838_RS06290 b4f32069a3ac9307502bf983bc487a93 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 122 5.3E-24 T 09-03-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 LS838_RS06290 b4f32069a3ac9307502bf983bc487a93 188 SUPERFAMILY SSF50249 130 186 1.2E-17 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS06290 b4f32069a3ac9307502bf983bc487a93 188 SMART SM01185 69 123 1.7E-27 T 09-03-2017 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 LS838_RS06290 b4f32069a3ac9307502bf983bc487a93 188 PIRSF PIRSF005901 2 188 2.5E-68 T 09-03-2017 IPR020599 Translation elongation factor P/YeiP LS838_RS03120 eeb82032b19701a0e347d816eeefe65f 241 SUPERFAMILY SSF46894 138 235 1.84E-28 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LS838_RS03120 eeb82032b19701a0e347d816eeefe65f 241 SMART SM00862 159 234 1.3E-28 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LS838_RS03120 eeb82032b19701a0e347d816eeefe65f 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 165 234 1.7E-27 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LS838_RS03120 eeb82032b19701a0e347d816eeefe65f 241 SMART SM00448 1 114 6.0E-42 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LS838_RS03120 eeb82032b19701a0e347d816eeefe65f 241 Pfam PF00072 Response regulator receiver domain 3 115 1.2E-27 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LS838_RS03120 eeb82032b19701a0e347d816eeefe65f 241 Gene3D G3DSA:3.40.50.2300 1 128 5.1E-38 T 09-03-2017 LS838_RS03120 eeb82032b19701a0e347d816eeefe65f 241 Gene3D G3DSA:1.10.10.10 141 236 5.5E-35 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS03120 eeb82032b19701a0e347d816eeefe65f 241 SUPERFAMILY SSF52172 1 129 4.27E-37 T 09-03-2017 IPR011006 CheY-like superfamily LS838_RS01280 eceb5f372322832603550db5f46425a7 542 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 465 2.8E-65 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain LS838_RS01280 eceb5f372322832603550db5f46425a7 542 Gene3D G3DSA:3.90.76.10 46 218 2.3E-43 T 09-03-2017 LS838_RS01280 eceb5f372322832603550db5f46425a7 542 SUPERFAMILY SSF53850 35 540 1.71E-109 T 09-03-2017 LS838_RS01280 eceb5f372322832603550db5f46425a7 542 PIRSF PIRSF002741 1 542 6.1E-85 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LS838_RS01280 eceb5f372322832603550db5f46425a7 542 Gene3D G3DSA:3.10.105.10 291 513 1.2E-44 T 09-03-2017 LS838_RS03565 ac1e33d043e570b32536cde6d6779b0d 441 Gene3D G3DSA:3.10.50.40 156 216 2.9E-10 T 09-03-2017 LS838_RS03565 ac1e33d043e570b32536cde6d6779b0d 441 TIGRFAM TIGR00115 tig: trigger factor 13 419 5.6E-130 T 09-03-2017 IPR005215 Trigger factor GO:0015031 LS838_RS03565 ac1e33d043e570b32536cde6d6779b0d 441 SUPERFAMILY SSF102735 1 128 9.94E-34 T 09-03-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 LS838_RS03565 ac1e33d043e570b32536cde6d6779b0d 441 SUPERFAMILY SSF54534 89 242 8.45E-36 T 09-03-2017 LS838_RS03565 ac1e33d043e570b32536cde6d6779b0d 441 PIRSF PIRSF003095 1 441 1.1E-123 T 09-03-2017 IPR005215 Trigger factor GO:0015031 LS838_RS03565 ac1e33d043e570b32536cde6d6779b0d 441 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 236 4.6E-16 T 09-03-2017 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 LS838_RS03565 ac1e33d043e570b32536cde6d6779b0d 441 Gene3D G3DSA:3.30.70.1050 1 119 1.2E-32 T 09-03-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 LS838_RS03565 ac1e33d043e570b32536cde6d6779b0d 441 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 420 2.4E-39 T 09-03-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 LS838_RS03565 ac1e33d043e570b32536cde6d6779b0d 441 SUPERFAMILY SSF109998 249 428 1.31E-37 T 09-03-2017 IPR027304 Trigger factor/SurA domain LS838_RS03565 ac1e33d043e570b32536cde6d6779b0d 441 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 5.4E-36 T 09-03-2017 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 LS838_RS03565 ac1e33d043e570b32536cde6d6779b0d 441 Gene3D G3DSA:1.10.3120.10 217 399 1.4E-58 T 09-03-2017 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 LS838_RS03565 ac1e33d043e570b32536cde6d6779b0d 441 Hamap MF_00303 Trigger factor [tig]. 1 426 21.313 T 09-03-2017 IPR005215 Trigger factor GO:0015031 LS838_RS02285 56e198d37d3edae365e7c780fd5aee86 603 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 603 6.4E-207 T 09-03-2017 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 LS838_RS02285 56e198d37d3edae365e7c780fd5aee86 603 Gene3D G3DSA:3.40.50.10490 442 603 1.1E-52 T 09-03-2017 LS838_RS02285 56e198d37d3edae365e7c780fd5aee86 603 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 603 36.625 T 09-03-2017 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 LS838_RS02285 56e198d37d3edae365e7c780fd5aee86 603 Gene3D G3DSA:3.40.50.10490 244 441 5.5E-54 T 09-03-2017 LS838_RS02285 56e198d37d3edae365e7c780fd5aee86 603 SUPERFAMILY SSF53697 246 603 2.1E-90 T 09-03-2017 LS838_RS02285 56e198d37d3edae365e7c780fd5aee86 603 Pfam PF13522 Glutamine amidotransferase domain 63 182 1.1E-21 T 09-03-2017 LS838_RS02285 56e198d37d3edae365e7c780fd5aee86 603 Pfam PF01380 SIS domain 289 413 2.0E-27 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 LS838_RS02285 56e198d37d3edae365e7c780fd5aee86 603 Pfam PF01380 SIS domain 460 580 9.5E-18 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 LS838_RS02285 56e198d37d3edae365e7c780fd5aee86 603 SUPERFAMILY SSF56235 2 234 5.83E-62 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LS838_RS02285 56e198d37d3edae365e7c780fd5aee86 603 Gene3D G3DSA:3.60.20.10 2 234 1.9E-65 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LS838_RS02310 f694baf678a85fd3d3dab557ad777c4f 909 SUPERFAMILY SSF51621 17 909 1.88E-285 T 09-03-2017 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 LS838_RS02310 f694baf678a85fd3d3dab557ad777c4f 909 Gene3D G3DSA:1.20.1440.90 272 402 3.7E-25 T 09-03-2017 LS838_RS02310 f694baf678a85fd3d3dab557ad777c4f 909 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 09-03-2017 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LS838_RS02310 f694baf678a85fd3d3dab557ad777c4f 909 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 8 909 17.274 T 09-03-2017 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LS838_RS02310 f694baf678a85fd3d3dab557ad777c4f 909 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 603 632 2.3E-50 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LS838_RS02310 f694baf678a85fd3d3dab557ad777c4f 909 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 2.3E-50 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LS838_RS02310 f694baf678a85fd3d3dab557ad777c4f 909 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 399 419 2.3E-50 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LS838_RS02310 f694baf678a85fd3d3dab557ad777c4f 909 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 2.3E-50 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LS838_RS02310 f694baf678a85fd3d3dab557ad777c4f 909 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 738 764 2.3E-50 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LS838_RS02310 f694baf678a85fd3d3dab557ad777c4f 909 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 561 581 2.3E-50 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LS838_RS02310 f694baf678a85fd3d3dab557ad777c4f 909 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 243 258 2.3E-50 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LS838_RS02310 f694baf678a85fd3d3dab557ad777c4f 909 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 563 575 - T 09-03-2017 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LS838_RS02310 f694baf678a85fd3d3dab557ad777c4f 909 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 909 1.6E-254 T 09-03-2017 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 LS838_RS03680 e41179e59103a4441f0f171643cc3899 157 Pfam PF01316 Arginine repressor, DNA binding domain 1 63 1.6E-19 T 09-03-2017 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 LS838_RS03680 e41179e59103a4441f0f171643cc3899 157 PRINTS PR01467 Bacterial arginine repressor signature 37 52 3.7E-12 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 LS838_RS03680 e41179e59103a4441f0f171643cc3899 157 PRINTS PR01467 Bacterial arginine repressor signature 21 34 3.7E-12 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 LS838_RS03680 e41179e59103a4441f0f171643cc3899 157 PRINTS PR01467 Bacterial arginine repressor signature 120 135 3.7E-12 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 LS838_RS03680 e41179e59103a4441f0f171643cc3899 157 SUPERFAMILY SSF55252 80 146 4.84E-12 T 09-03-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 LS838_RS03680 e41179e59103a4441f0f171643cc3899 157 Hamap MF_00173 Arginine repressor [argR]. 1 154 46.048 T 09-03-2017 IPR001669 Arginine repressor GO:0003700|GO:0006355 LS838_RS03680 e41179e59103a4441f0f171643cc3899 157 Gene3D G3DSA:1.10.10.10 9 63 4.9E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS03680 e41179e59103a4441f0f171643cc3899 157 Gene3D G3DSA:3.30.1360.40 73 148 1.5E-18 T 09-03-2017 IPR024946 Arginine repressor C-terminal-like domain LS838_RS03680 e41179e59103a4441f0f171643cc3899 157 SUPERFAMILY SSF46785 5 76 1.98E-17 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS03680 e41179e59103a4441f0f171643cc3899 157 Pfam PF02863 Arginine repressor, C-terminal domain 80 147 2.0E-16 T 09-03-2017 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 LS838_RS07915 b7d6fc18ccf4cdd509ff0037f3121451 380 Gene3D G3DSA:3.90.550.10 17 268 1.1E-28 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS07915 b7d6fc18ccf4cdd509ff0037f3121451 380 Gene3D G3DSA:3.90.550.10 305 348 1.1E-28 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS07915 b7d6fc18ccf4cdd509ff0037f3121451 380 SUPERFAMILY SSF53448 17 261 5.28E-33 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS07915 b7d6fc18ccf4cdd509ff0037f3121451 380 SUPERFAMILY SSF53448 322 338 5.28E-33 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS07915 b7d6fc18ccf4cdd509ff0037f3121451 380 SUPERFAMILY SSF51161 227 376 5.27E-12 T 09-03-2017 IPR011004 Trimeric LpxA-like LS838_RS07915 b7d6fc18ccf4cdd509ff0037f3121451 380 TIGRFAM TIGR02092 glgD: glucose-1-phosphate adenylyltransferase, GlgD subunit 5 372 9.2E-110 T 09-03-2017 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit GO:0005978 LS838_RS07915 b7d6fc18ccf4cdd509ff0037f3121451 380 Pfam PF00483 Nucleotidyl transferase 17 237 1.4E-8 T 09-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 LS838_RS04690 4c691ddc7f4746aa69f079d039dc7fe6 181 Pfam PF08238 Sel1 repeat 7 33 0.19 T 09-03-2017 IPR006597 Sel1-like repeat LS838_RS04690 4c691ddc7f4746aa69f079d039dc7fe6 181 Pfam PF08238 Sel1 repeat 37 72 2.4E-7 T 09-03-2017 IPR006597 Sel1-like repeat LS838_RS04690 4c691ddc7f4746aa69f079d039dc7fe6 181 Pfam PF08238 Sel1 repeat 120 137 19.0 T 09-03-2017 IPR006597 Sel1-like repeat LS838_RS04690 4c691ddc7f4746aa69f079d039dc7fe6 181 Pfam PF08238 Sel1 repeat 77 103 0.011 T 09-03-2017 IPR006597 Sel1-like repeat LS838_RS04690 4c691ddc7f4746aa69f079d039dc7fe6 181 SUPERFAMILY SSF81901 8 160 5.49E-26 T 09-03-2017 LS838_RS04690 4c691ddc7f4746aa69f079d039dc7fe6 181 Gene3D G3DSA:1.25.40.10 12 146 3.9E-26 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LS838_RS04690 4c691ddc7f4746aa69f079d039dc7fe6 181 SMART SM00671 37 72 3.6E-6 T 09-03-2017 IPR006597 Sel1-like repeat LS838_RS04690 4c691ddc7f4746aa69f079d039dc7fe6 181 SMART SM00671 3 36 160.0 T 09-03-2017 IPR006597 Sel1-like repeat LS838_RS04690 4c691ddc7f4746aa69f079d039dc7fe6 181 SMART SM00671 73 108 7.5 T 09-03-2017 IPR006597 Sel1-like repeat LS838_RS04690 4c691ddc7f4746aa69f079d039dc7fe6 181 SMART SM00671 116 151 20.0 T 09-03-2017 IPR006597 Sel1-like repeat LS838_RS05590 48c629fdad207f4547b68930158938c9 249 TIGRFAM TIGR00613 reco: DNA repair protein RecO 8 245 7.6E-47 T 09-03-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 LS838_RS05590 48c629fdad207f4547b68930158938c9 249 Hamap MF_00201 DNA repair protein RecO [recO]. 4 246 24.578 T 09-03-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 LS838_RS05590 48c629fdad207f4547b68930158938c9 249 SUPERFAMILY SSF50249 6 77 2.74E-8 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS05590 48c629fdad207f4547b68930158938c9 249 Gene3D G3DSA:2.40.50.140 6 65 1.9E-9 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS05590 48c629fdad207f4547b68930158938c9 249 Pfam PF11967 Recombination protein O N terminal 8 77 6.7E-13 T 09-03-2017 IPR022572 DNA replication/recombination mediator RecO, N-terminal LS838_RS05590 48c629fdad207f4547b68930158938c9 249 SUPERFAMILY SSF57863 84 235 1.31E-37 T 09-03-2017 LS838_RS05590 48c629fdad207f4547b68930158938c9 249 Pfam PF02565 Recombination protein O C terminal 87 240 1.3E-27 T 09-03-2017 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 LS838_RS04005 84ea84fa300d9ccd7823ed36cc0c0c42 1427 TIGRFAM TIGR01865 cas_Csn1: CRISPR subtype II RNA-guided endonuclease Cas9 8 1078 8.7E-111 T 09-03-2017 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 LS838_RS04005 84ea84fa300d9ccd7823ed36cc0c0c42 1427 Pfam PF13395 HNH endonuclease 883 925 1.4E-11 T 09-03-2017 IPR003615 HNH nuclease LS838_RS04005 84ea84fa300d9ccd7823ed36cc0c0c42 1427 Pfam PF16592 REC lobe of CRISPR-associated endonuclease Cas9 208 753 2.1E-98 T 09-03-2017 IPR032240 CRISPR-associated endonuclease Cas9, REC lobe LS838_RS09805 ddc506611c85b4ea72401d4375fc33e7 155 ProSitePatterns PS00818 Dps protein family signature 1. 28 44 - T 09-03-2017 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 LS838_RS09805 ddc506611c85b4ea72401d4375fc33e7 155 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 28 44 8.3E-14 T 09-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 LS838_RS09805 ddc506611c85b4ea72401d4375fc33e7 155 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 52 68 8.3E-14 T 09-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 LS838_RS09805 ddc506611c85b4ea72401d4375fc33e7 155 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 125 143 8.3E-14 T 09-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 LS838_RS09805 ddc506611c85b4ea72401d4375fc33e7 155 SUPERFAMILY SSF47240 5 151 1.18E-41 T 09-03-2017 IPR009078 Ferritin-like superfamily LS838_RS09805 ddc506611c85b4ea72401d4375fc33e7 155 PIRSF PIRSF005900 1 152 1.0E-41 T 09-03-2017 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 LS838_RS09805 ddc506611c85b4ea72401d4375fc33e7 155 Gene3D G3DSA:1.20.1260.10 3 150 4.0E-50 T 09-03-2017 IPR012347 Ferritin-related LS838_RS09805 ddc506611c85b4ea72401d4375fc33e7 155 Pfam PF00210 Ferritin-like domain 8 149 2.5E-29 T 09-03-2017 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 LS838_RS00645 56f65bf48d843656453642f6cf5bd3cc 308 SUPERFAMILY SSF46785 8 89 1.58E-15 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS00645 56f65bf48d843656453642f6cf5bd3cc 308 Gene3D G3DSA:3.40.190.10 202 273 8.4E-10 T 09-03-2017 LS838_RS00645 56f65bf48d843656453642f6cf5bd3cc 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 1.6E-13 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS00645 56f65bf48d843656453642f6cf5bd3cc 308 Pfam PF03466 LysR substrate binding domain 89 300 5.6E-28 T 09-03-2017 IPR005119 LysR, substrate-binding LS838_RS00645 56f65bf48d843656453642f6cf5bd3cc 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.3E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS00645 56f65bf48d843656453642f6cf5bd3cc 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.3E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS00645 56f65bf48d843656453642f6cf5bd3cc 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.3E-6 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS00645 56f65bf48d843656453642f6cf5bd3cc 308 Gene3D G3DSA:3.40.190.10 91 201 7.3E-17 T 09-03-2017 LS838_RS00645 56f65bf48d843656453642f6cf5bd3cc 308 SUPERFAMILY SSF53850 91 301 3.53E-29 T 09-03-2017 LS838_RS00645 56f65bf48d843656453642f6cf5bd3cc 308 Gene3D G3DSA:1.10.10.10 8 89 8.6E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 Pfam PF00082 Subtilase family 213 679 5.6E-58 T 09-03-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 Pfam PF02225 PA domain 467 549 4.9E-13 T 09-03-2017 IPR003137 PA domain LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 PRINTS PR00723 Subtilisin serine protease family (S8) signature 213 232 1.1E-15 T 09-03-2017 IPR015500 Peptidase S8, subtilisin-related LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 PRINTS PR00723 Subtilisin serine protease family (S8) signature 614 630 1.1E-15 T 09-03-2017 IPR015500 Peptidase S8, subtilisin-related LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 PRINTS PR00723 Subtilisin serine protease family (S8) signature 282 295 1.1E-15 T 09-03-2017 IPR015500 Peptidase S8, subtilisin-related LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 Gene3D G3DSA:3.50.30.30 437 563 1.4E-28 T 09-03-2017 LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 615 625 - T 09-03-2017 IPR023828 Peptidase S8, subtilisin, Ser-active site LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 SUPERFAMILY SSF52743 265 426 4.97E-63 T 09-03-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 SUPERFAMILY SSF52743 577 689 4.97E-63 T 09-03-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 SUPERFAMILY SSF52743 196 236 4.97E-63 T 09-03-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 Gene3D G3DSA:3.40.50.200 198 432 5.7E-77 T 09-03-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 Gene3D G3DSA:3.40.50.200 572 687 5.7E-77 T 09-03-2017 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 SUPERFAMILY SSF50939 1672 1720 4.32E-7 T 09-03-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 SUPERFAMILY SSF50939 1558 1613 4.32E-7 T 09-03-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 SUPERFAMILY SSF50939 1500 1525 4.32E-7 T 09-03-2017 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 Pfam PF06280 Fn3-like domain 703 811 3.9E-25 T 09-03-2017 IPR010435 Fn3-like domain GO:0004252|GO:0005618|GO:0016020 LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 Gene3D G3DSA:2.60.40.320 1591 1633 1.8E-6 T 09-03-2017 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 SUPERFAMILY SSF52025 458 634 7.06E-20 T 09-03-2017 LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 Gene3D G3DSA:2.60.40.1560 1162 1250 5.0E-9 T 09-03-2017 LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 218 229 - T 09-03-2017 IPR023827 Peptidase S8, subtilisin, Asp-active site LS838_RS05350 2d3939240e65676d6fc532e82bc892a1 1938 Pfam PF03217 Bacterial surface layer protein 1824 1936 1.9E-25 T 09-03-2017 IPR024968 SLAP domain, Lactobacillus LS838_RS03600 9040f3420a81e4761dc4e9411f7bf9c6 330 Gene3D G3DSA:3.40.50.720 1 117 3.8E-20 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS03600 9040f3420a81e4761dc4e9411f7bf9c6 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 298 3.5E-53 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LS838_RS03600 9040f3420a81e4761dc4e9411f7bf9c6 330 Gene3D G3DSA:3.40.50.720 118 297 1.6E-53 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS03600 9040f3420a81e4761dc4e9411f7bf9c6 330 SUPERFAMILY SSF52283 2 134 4.35E-33 T 09-03-2017 LS838_RS03600 9040f3420a81e4761dc4e9411f7bf9c6 330 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 10 330 8.5E-26 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LS838_RS03600 9040f3420a81e4761dc4e9411f7bf9c6 330 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LS838_RS03600 9040f3420a81e4761dc4e9411f7bf9c6 330 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 - T 09-03-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LS838_RS03600 9040f3420a81e4761dc4e9411f7bf9c6 330 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LS838_RS03600 9040f3420a81e4761dc4e9411f7bf9c6 330 SUPERFAMILY SSF51735 103 299 9.87E-51 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS08100 581ef172510aa9811e38a0118bacdeb8 389 Gene3D G3DSA:3.40.50.2000 172 334 2.1E-23 T 09-03-2017 LS838_RS08100 581ef172510aa9811e38a0118bacdeb8 389 Pfam PF00534 Glycosyl transferases group 1 191 344 1.3E-25 T 09-03-2017 IPR001296 Glycosyl transferase, family 1 LS838_RS08100 581ef172510aa9811e38a0118bacdeb8 389 SUPERFAMILY SSF53756 1 375 1.96E-71 T 09-03-2017 LS838_RS08100 581ef172510aa9811e38a0118bacdeb8 389 Pfam PF13439 Glycosyltransferase Family 4 16 183 7.7E-34 T 09-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 LS838_RS02200 dfaef5725169afe8d072f43ffd6d26ec 211 Pfam PF00194 Eukaryotic-type carbonic anhydrase 9 108 1.6E-7 T 09-03-2017 IPR001148 Alpha carbonic anhydrase LS838_RS02200 dfaef5725169afe8d072f43ffd6d26ec 211 Pfam PF00194 Eukaryotic-type carbonic anhydrase 140 199 3.5E-9 T 09-03-2017 IPR001148 Alpha carbonic anhydrase LS838_RS02200 dfaef5725169afe8d072f43ffd6d26ec 211 SMART SM01057 4 200 2.7E-11 T 09-03-2017 IPR001148 Alpha carbonic anhydrase LS838_RS02200 dfaef5725169afe8d072f43ffd6d26ec 211 Gene3D G3DSA:3.10.200.10 3 199 2.7E-31 T 09-03-2017 IPR001148 Alpha carbonic anhydrase LS838_RS02200 dfaef5725169afe8d072f43ffd6d26ec 211 SUPERFAMILY SSF51069 3 199 4.97E-37 T 09-03-2017 IPR001148 Alpha carbonic anhydrase LS838_RS09470 f3a87e3fecc1af4e4f84d3f33d7b5637 154 SUPERFAMILY SSF52121 11 153 9.42E-49 T 09-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LS838_RS09470 f3a87e3fecc1af4e4f84d3f33d7b5637 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 26.215 T 09-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LS838_RS09470 f3a87e3fecc1af4e4f84d3f33d7b5637 154 Gene3D G3DSA:3.40.50.960 3 153 7.8E-54 T 09-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LS838_RS09470 f3a87e3fecc1af4e4f84d3f33d7b5637 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 148 3.9E-44 T 09-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LS838_RS09470 f3a87e3fecc1af4e4f84d3f33d7b5637 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 150 1.7E-47 T 09-03-2017 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LS838_RS03470 6ff3b6700a4383d834320ac2634a5496 796 Gene3D G3DSA:3.40.50.300 646 711 5.9E-16 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03470 6ff3b6700a4383d834320ac2634a5496 796 SUPERFAMILY SSF52540 184 488 9.4E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03470 6ff3b6700a4383d834320ac2634a5496 796 Pfam PF13538 UvrD-like helicase C-terminal domain 654 701 1.9E-17 T 09-03-2017 IPR027785 UvrD-like helicase C-terminal domain LS838_RS03470 6ff3b6700a4383d834320ac2634a5496 796 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 4 723 1.7E-202 T 09-03-2017 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 LS838_RS03470 6ff3b6700a4383d834320ac2634a5496 796 Pfam PF13604 AAA domain 324 521 3.2E-43 T 09-03-2017 LS838_RS03470 6ff3b6700a4383d834320ac2634a5496 796 Gene3D G3DSA:3.40.50.300 289 505 6.0E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03470 6ff3b6700a4383d834320ac2634a5496 796 Pfam PF14490 Helix-hairpin-helix containing domain 147 235 1.4E-18 T 09-03-2017 IPR029493 RecD helicase-like helix-hairpin-helix domain LS838_RS03470 6ff3b6700a4383d834320ac2634a5496 796 SUPERFAMILY SSF52540 545 726 8.85E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03470 6ff3b6700a4383d834320ac2634a5496 796 SUPERFAMILY SSF52540 441 506 8.85E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03470 6ff3b6700a4383d834320ac2634a5496 796 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 1 772 26.043 T 09-03-2017 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 LS838_RS06700 7be4ee6a2c05a20ca8300b8f7a7ae62c 194 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 186 1.1E-49 T 09-03-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 LS838_RS06700 7be4ee6a2c05a20ca8300b8f7a7ae62c 194 Gene3D G3DSA:3.40.50.300 1 192 5.7E-68 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06700 7be4ee6a2c05a20ca8300b8f7a7ae62c 194 Pfam PF01121 Dephospho-CoA kinase 5 180 6.7E-53 T 09-03-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 LS838_RS06700 7be4ee6a2c05a20ca8300b8f7a7ae62c 194 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 192 25.304 T 09-03-2017 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 LS838_RS06700 7be4ee6a2c05a20ca8300b8f7a7ae62c 194 SUPERFAMILY SSF52540 1 193 3.43E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06880 22ec85fa75b356c128dc0949a17bd86c 38 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 2 35 1.7E-10 T 09-03-2017 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 LS838_RS06880 22ec85fa75b356c128dc0949a17bd86c 38 Pfam PF04650 YSIRK type signal peptide 9 31 5.6E-9 T 09-03-2017 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 LS838_RS05840 349d8431e0b2dc2755878622b31413e7 100 Pfam PF01022 Bacterial regulatory protein, arsR family 20 66 1.6E-8 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LS838_RS05840 349d8431e0b2dc2755878622b31413e7 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 14 29 3.0E-9 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LS838_RS05840 349d8431e0b2dc2755878622b31413e7 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 3.0E-9 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LS838_RS05840 349d8431e0b2dc2755878622b31413e7 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 3.0E-9 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LS838_RS05840 349d8431e0b2dc2755878622b31413e7 100 SUPERFAMILY SSF46785 4 95 2.11E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS05840 349d8431e0b2dc2755878622b31413e7 100 Gene3D G3DSA:1.10.10.10 3 95 2.8E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS05840 349d8431e0b2dc2755878622b31413e7 100 SMART SM00418 12 91 1.1E-18 T 09-03-2017 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 LS838_RS05855 d81c5d3f238a6f1219fd7f1dbb8a5826 233 Gene3D G3DSA:2.40.260.10 89 221 7.2E-37 T 09-03-2017 IPR023365 Sortase domain LS838_RS05855 d81c5d3f238a6f1219fd7f1dbb8a5826 233 TIGRFAM TIGR01076 sortase_fam: sortase 96 218 6.6E-17 T 09-03-2017 IPR005754 Sortase family LS838_RS05855 d81c5d3f238a6f1219fd7f1dbb8a5826 233 Pfam PF04203 Sortase family 98 204 5.4E-21 T 09-03-2017 IPR005754 Sortase family LS838_RS05855 d81c5d3f238a6f1219fd7f1dbb8a5826 233 SUPERFAMILY SSF63817 86 218 1.44E-36 T 09-03-2017 IPR023365 Sortase domain LS838_RS04100 415d7ff93bbeee0ebcd3885870c221d7 314 Gene3D G3DSA:3.40.366.10 196 305 3.4E-48 T 09-03-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 LS838_RS04100 415d7ff93bbeee0ebcd3885870c221d7 314 Gene3D G3DSA:3.40.366.10 3 119 3.4E-48 T 09-03-2017 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 LS838_RS04100 415d7ff93bbeee0ebcd3885870c221d7 314 SUPERFAMILY SSF55048 127 194 1.96E-7 T 09-03-2017 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 LS838_RS04100 415d7ff93bbeee0ebcd3885870c221d7 314 PIRSF PIRSF000446 1 307 1.1E-55 T 09-03-2017 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 LS838_RS04100 415d7ff93bbeee0ebcd3885870c221d7 314 Pfam PF00698 Acyl transferase domain 6 281 6.8E-27 T 09-03-2017 IPR014043 Acyl transferase LS838_RS04100 415d7ff93bbeee0ebcd3885870c221d7 314 Gene3D G3DSA:3.30.70.250 124 195 7.7E-13 T 09-03-2017 LS838_RS04100 415d7ff93bbeee0ebcd3885870c221d7 314 SUPERFAMILY SSF52151 189 306 2.51E-50 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LS838_RS04100 415d7ff93bbeee0ebcd3885870c221d7 314 SUPERFAMILY SSF52151 4 119 2.51E-50 T 09-03-2017 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 LS838_RS04100 415d7ff93bbeee0ebcd3885870c221d7 314 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 300 1.9E-17 T 09-03-2017 IPR020801 Polyketide synthase, acyl transferase domain LS838_RS04015 afb0c9347f1d8a26f3717a6838e139e5 101 SUPERFAMILY SSF143430 1 82 9.29E-13 T 09-03-2017 LS838_RS04015 afb0c9347f1d8a26f3717a6838e139e5 101 Pfam PF09827 CRISPR associated protein Cas2 1 78 1.5E-14 T 09-03-2017 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 LS838_RS04015 afb0c9347f1d8a26f3717a6838e139e5 101 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 96 3.2E-18 T 09-03-2017 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 LS838_RS04015 afb0c9347f1d8a26f3717a6838e139e5 101 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 99 12.733 T 09-03-2017 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 LS838_RS04015 afb0c9347f1d8a26f3717a6838e139e5 101 Gene3D G3DSA:3.30.70.240 1 64 1.5E-6 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain LS838_RS06135 ef1b087e583144e30c2e54841c259774 318 Gene3D G3DSA:3.40.50.300 4 257 7.9E-78 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06135 ef1b087e583144e30c2e54841c259774 318 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 271 8.2E-6 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LS838_RS06135 ef1b087e583144e30c2e54841c259774 318 SUPERFAMILY SSF52540 5 255 5.8E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06135 ef1b087e583144e30c2e54841c259774 318 SMART SM00382 41 233 5.4E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS06135 ef1b087e583144e30c2e54841c259774 318 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS06135 ef1b087e583144e30c2e54841c259774 318 Pfam PF00005 ABC transporter 33 184 1.6E-33 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS00495 807859e3698a196617c4a1f6f5b477d9 333 SUPERFAMILY SSF52283 1 136 2.46E-38 T 09-03-2017 LS838_RS00495 807859e3698a196617c4a1f6f5b477d9 333 SUPERFAMILY SSF51735 104 301 3.47E-51 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS00495 807859e3698a196617c4a1f6f5b477d9 333 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 330 3.6E-32 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LS838_RS00495 807859e3698a196617c4a1f6f5b477d9 333 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LS838_RS00495 807859e3698a196617c4a1f6f5b477d9 333 Gene3D G3DSA:3.40.50.720 144 307 5.6E-43 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS00495 807859e3698a196617c4a1f6f5b477d9 333 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 - T 09-03-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LS838_RS00495 807859e3698a196617c4a1f6f5b477d9 333 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LS838_RS00495 807859e3698a196617c4a1f6f5b477d9 333 Gene3D G3DSA:3.40.50.720 1 143 4.9E-37 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS00495 807859e3698a196617c4a1f6f5b477d9 333 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 117 299 4.9E-50 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LS838_RS01460 fe532447cb46db52c3c25ff73a98dab2 477 Gene3D G3DSA:3.20.140.10 3 386 5.3E-129 T 09-03-2017 LS838_RS01460 fe532447cb46db52c3c25ff73a98dab2 477 SUPERFAMILY SSF51690 136 476 1.61E-108 T 09-03-2017 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 LS838_RS01460 fe532447cb46db52c3c25ff73a98dab2 477 SUPERFAMILY SSF54675 4 135 1.1E-45 T 09-03-2017 LS838_RS01460 fe532447cb46db52c3c25ff73a98dab2 477 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 152 352 2.2E-11 T 09-03-2017 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 LS838_RS01460 fe532447cb46db52c3c25ff73a98dab2 477 PIRSF PIRSF000484 1 477 1.3E-148 T 09-03-2017 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 LS838_RS01460 fe532447cb46db52c3c25ff73a98dab2 477 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 6 463 4.6E-161 T 09-03-2017 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 LS838_RS05095 819c66cce0d4533b965809c225bc27ca 304 Pfam PF00005 ABC transporter 21 163 2.1E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS05095 819c66cce0d4533b965809c225bc27ca 304 SUPERFAMILY SSF52540 3 228 3.04E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05095 819c66cce0d4533b965809c225bc27ca 304 SMART SM00382 29 212 2.7E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS05095 819c66cce0d4533b965809c225bc27ca 304 Gene3D G3DSA:3.40.50.300 2 224 4.3E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05095 819c66cce0d4533b965809c225bc27ca 304 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS01420 f5fc5e401bdd56f0e956ccf5e8cffaae 321 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 144 224 2.0E-15 T 09-03-2017 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain LS838_RS01420 f5fc5e401bdd56f0e956ccf5e8cffaae 321 Gene3D G3DSA:1.10.10.10 263 308 3.5E-8 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS01420 f5fc5e401bdd56f0e956ccf5e8cffaae 321 SUPERFAMILY SSF46785 265 319 2.4E-7 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS07490 a08ad7174afd456faa1e93528f0b35e4 500 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 488 9.0E-170 T 09-03-2017 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 LS838_RS07490 a08ad7174afd456faa1e93528f0b35e4 500 PRINTS PR00987 Glutamyl-tRNA synthetase signature 216 224 6.0E-28 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 LS838_RS07490 a08ad7174afd456faa1e93528f0b35e4 500 PRINTS PR00987 Glutamyl-tRNA synthetase signature 200 210 6.0E-28 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 LS838_RS07490 a08ad7174afd456faa1e93528f0b35e4 500 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 6.0E-28 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 LS838_RS07490 a08ad7174afd456faa1e93528f0b35e4 500 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 6.0E-28 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 LS838_RS07490 a08ad7174afd456faa1e93528f0b35e4 500 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 6.0E-28 T 09-03-2017 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 LS838_RS07490 a08ad7174afd456faa1e93528f0b35e4 500 Gene3D G3DSA:3.90.800.10 71 201 1.1E-35 T 09-03-2017 LS838_RS07490 a08ad7174afd456faa1e93528f0b35e4 500 SUPERFAMILY SSF52374 5 323 3.75E-106 T 09-03-2017 LS838_RS07490 a08ad7174afd456faa1e93528f0b35e4 500 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 330 1.2E-115 T 09-03-2017 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 LS838_RS07490 a08ad7174afd456faa1e93528f0b35e4 500 Gene3D G3DSA:1.10.1160.10 256 339 5.1E-33 T 09-03-2017 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 LS838_RS07490 a08ad7174afd456faa1e93528f0b35e4 500 Gene3D G3DSA:1.10.10.350 395 490 2.6E-17 T 09-03-2017 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 LS838_RS07490 a08ad7174afd456faa1e93528f0b35e4 500 SUPERFAMILY SSF48163 306 489 8.5E-45 T 09-03-2017 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 LS838_RS07490 a08ad7174afd456faa1e93528f0b35e4 500 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS07490 a08ad7174afd456faa1e93528f0b35e4 500 Gene3D G3DSA:3.40.50.620 5 70 9.5E-52 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS07490 a08ad7174afd456faa1e93528f0b35e4 500 Gene3D G3DSA:3.40.50.620 202 251 9.5E-52 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS07490 a08ad7174afd456faa1e93528f0b35e4 500 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 6 491 33.389 T 09-03-2017 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 LS838_RS03195 aa62b8769b3fcff335ce1761604656a7 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 209 6.1E-86 T 09-03-2017 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 LS838_RS03195 aa62b8769b3fcff335ce1761604656a7 209 Gene3D G3DSA:3.40.50.2020 4 209 1.1E-78 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS03195 aa62b8769b3fcff335ce1761604656a7 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 45.571 T 09-03-2017 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 LS838_RS03195 aa62b8769b3fcff335ce1761604656a7 209 SUPERFAMILY SSF53271 5 207 1.7E-69 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS03195 aa62b8769b3fcff335ce1761604656a7 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 1.0E-69 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS04865 7d4ddd41d4fbe8dd719ebc1a227e1634 667 Gene3D G3DSA:3.40.50.300 386 568 1.5E-17 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04865 7d4ddd41d4fbe8dd719ebc1a227e1634 667 SUPERFAMILY SSF52540 387 569 5.25E-18 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04865 7d4ddd41d4fbe8dd719ebc1a227e1634 667 Pfam PF01878 EVE domain 251 375 1.2E-5 T 09-03-2017 IPR002740 EVE domain LS838_RS04865 7d4ddd41d4fbe8dd719ebc1a227e1634 667 Pfam PF07728 AAA domain (dynein-related subfamily) 413 562 2.3E-25 T 09-03-2017 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 LS838_RS04865 7d4ddd41d4fbe8dd719ebc1a227e1634 667 SUPERFAMILY SSF88697 251 375 1.69E-20 T 09-03-2017 IPR015947 PUA-like domain LS838_RS03380 a94651abc144efebe064f37ad4e67db5 460 Gene3D G3DSA:3.40.1190.10 103 317 1.2E-41 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LS838_RS03380 a94651abc144efebe064f37ad4e67db5 460 Gene3D G3DSA:3.90.190.20 319 454 7.4E-43 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LS838_RS03380 a94651abc144efebe064f37ad4e67db5 460 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 455 3.5E-118 T 09-03-2017 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS03380 a94651abc144efebe064f37ad4e67db5 460 SUPERFAMILY SSF51984 6 101 9.42E-16 T 09-03-2017 LS838_RS03380 a94651abc144efebe064f37ad4e67db5 460 Pfam PF08245 Mur ligase middle domain 118 296 2.2E-25 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LS838_RS03380 a94651abc144efebe064f37ad4e67db5 460 Gene3D G3DSA:3.40.50.720 7 101 9.3E-19 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS03380 a94651abc144efebe064f37ad4e67db5 460 SUPERFAMILY SSF53244 317 457 8.55E-40 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LS838_RS03380 a94651abc144efebe064f37ad4e67db5 460 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 457 32.006 T 09-03-2017 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS03380 a94651abc144efebe064f37ad4e67db5 460 Pfam PF02875 Mur ligase family, glutamate ligase domain 319 385 3.9E-6 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LS838_RS03380 a94651abc144efebe064f37ad4e67db5 460 SUPERFAMILY SSF53623 108 315 8.39E-41 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LS838_RS05375 2f007b40af1c033752b7ff04562d09c8 432 Pfam PF00152 tRNA synthetases class II (D, K and N) 113 426 7.2E-73 T 09-03-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS05375 2f007b40af1c033752b7ff04562d09c8 432 SUPERFAMILY SSF55681 98 431 1.49E-90 T 09-03-2017 LS838_RS05375 2f007b40af1c033752b7ff04562d09c8 432 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 3 432 40.446 T 09-03-2017 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 LS838_RS05375 2f007b40af1c033752b7ff04562d09c8 432 Pfam PF01336 OB-fold nucleic acid binding domain 18 96 7.0E-10 T 09-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 LS838_RS05375 2f007b40af1c033752b7ff04562d09c8 432 Gene3D G3DSA:2.40.50.140 8 103 3.1E-21 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS05375 2f007b40af1c033752b7ff04562d09c8 432 SUPERFAMILY SSF50249 10 103 4.5E-19 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS05375 2f007b40af1c033752b7ff04562d09c8 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 182 194 3.5E-15 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS05375 2f007b40af1c033752b7ff04562d09c8 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 387 401 3.5E-15 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS05375 2f007b40af1c033752b7ff04562d09c8 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 347 363 3.5E-15 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS05375 2f007b40af1c033752b7ff04562d09c8 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 198 211 3.5E-15 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS05375 2f007b40af1c033752b7ff04562d09c8 432 Gene3D G3DSA:3.30.930.10 104 432 1.5E-105 T 09-03-2017 LS838_RS05375 2f007b40af1c033752b7ff04562d09c8 432 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 7 431 2.5E-143 T 09-03-2017 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 LS838_RS02060 8d6fb022d19d26d3fb5982e48be311c3 535 SUPERFAMILY SSF53850 31 533 4.71E-98 T 09-03-2017 LS838_RS02060 8d6fb022d19d26d3fb5982e48be311c3 535 Gene3D G3DSA:3.10.105.10 301 504 8.2E-36 T 09-03-2017 LS838_RS02060 8d6fb022d19d26d3fb5982e48be311c3 535 PIRSF PIRSF002741 3 534 6.8E-80 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LS838_RS02060 8d6fb022d19d26d3fb5982e48be311c3 535 Gene3D G3DSA:3.40.190.10 151 300 2.9E-43 T 09-03-2017 LS838_RS02060 8d6fb022d19d26d3fb5982e48be311c3 535 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 80 102 - T 09-03-2017 IPR023765 Solute-binding protein family 5, conserved site LS838_RS02060 8d6fb022d19d26d3fb5982e48be311c3 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 446 5.2E-62 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain LS838_RS03025 751ac5a9f8ad607003c57e840b69dfc9 1082 SUPERFAMILY SSF55073 937 1073 2.12E-20 T 09-03-2017 IPR029787 Nucleotide cyclase LS838_RS03025 751ac5a9f8ad607003c57e840b69dfc9 1082 SUPERFAMILY SSF141868 208 454 4.18E-55 T 09-03-2017 IPR001633 EAL domain LS838_RS03025 751ac5a9f8ad607003c57e840b69dfc9 1082 Pfam PF00563 EAL domain 208 442 3.6E-53 T 09-03-2017 IPR001633 EAL domain LS838_RS03025 751ac5a9f8ad607003c57e840b69dfc9 1082 SMART SM00052 201 447 1.0E-36 T 09-03-2017 IPR001633 EAL domain LS838_RS03025 751ac5a9f8ad607003c57e840b69dfc9 1082 Gene3D G3DSA:3.20.20.450 208 449 3.6E-59 T 09-03-2017 IPR001633 EAL domain LS838_RS03025 751ac5a9f8ad607003c57e840b69dfc9 1082 SMART SM00267 921 1078 8.1E-16 T 09-03-2017 IPR000160 GGDEF domain LS838_RS03025 751ac5a9f8ad607003c57e840b69dfc9 1082 Pfam PF00990 Diguanylate cyclase, GGDEF domain 40 180 6.5E-5 T 09-03-2017 IPR000160 GGDEF domain LS838_RS03025 751ac5a9f8ad607003c57e840b69dfc9 1082 Pfam PF00990 Diguanylate cyclase, GGDEF domain 934 1072 8.2E-20 T 09-03-2017 IPR000160 GGDEF domain LS838_RS03025 751ac5a9f8ad607003c57e840b69dfc9 1082 Gene3D G3DSA:3.30.70.270 41 196 2.5E-10 T 09-03-2017 LS838_RS03025 751ac5a9f8ad607003c57e840b69dfc9 1082 Gene3D G3DSA:3.30.70.270 934 1073 4.0E-24 T 09-03-2017 LS838_RS03025 751ac5a9f8ad607003c57e840b69dfc9 1082 Gene3D G3DSA:3.30.450.20 665 708 4.4E-4 T 09-03-2017 LS838_RS03025 751ac5a9f8ad607003c57e840b69dfc9 1082 SUPERFAMILY SSF55073 43 182 1.18E-9 T 09-03-2017 IPR029787 Nucleotide cyclase LS838_RS03025 751ac5a9f8ad607003c57e840b69dfc9 1082 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 928 1072 1.2E-18 T 09-03-2017 IPR000160 GGDEF domain LS838_RS00660 c844adb379d09f242d71359c2f3bfe47 252 Pfam PF00561 alpha/beta hydrolase fold 32 135 1.1E-13 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 LS838_RS00660 c844adb379d09f242d71359c2f3bfe47 252 SUPERFAMILY SSF53474 4 139 4.42E-41 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS00660 c844adb379d09f242d71359c2f3bfe47 252 SUPERFAMILY SSF53474 181 246 4.42E-41 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS00660 c844adb379d09f242d71359c2f3bfe47 252 Gene3D G3DSA:3.40.50.1820 9 246 4.6E-36 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS06175 d04607e254ab29be9cc29a3c14d06324 523 Gene3D G3DSA:1.20.1560.10 8 290 2.8E-24 T 09-03-2017 LS838_RS06175 d04607e254ab29be9cc29a3c14d06324 523 SMART SM00382 341 523 3.1E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS06175 d04607e254ab29be9cc29a3c14d06324 523 Pfam PF00005 ABC transporter 332 477 6.4E-22 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS06175 d04607e254ab29be9cc29a3c14d06324 523 SUPERFAMILY SSF52540 320 518 1.02E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06175 d04607e254ab29be9cc29a3c14d06324 523 Gene3D G3DSA:3.40.50.300 318 521 1.6E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06175 d04607e254ab29be9cc29a3c14d06324 523 SUPERFAMILY SSF90123 7 293 1.44E-30 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS06175 d04607e254ab29be9cc29a3c14d06324 523 Pfam PF00664 ABC transporter transmembrane region 14 275 7.9E-12 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS02025 63d30af1c8805631ba2f2db909356445 389 Gene3D G3DSA:1.20.1250.20 203 383 2.0E-11 T 09-03-2017 LS838_RS02025 63d30af1c8805631ba2f2db909356445 389 Pfam PF07690 Major Facilitator Superfamily 12 347 1.3E-38 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LS838_RS02025 63d30af1c8805631ba2f2db909356445 389 SUPERFAMILY SSF103473 4 386 1.1E-53 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS02025 63d30af1c8805631ba2f2db909356445 389 Gene3D G3DSA:1.20.1250.20 8 185 4.5E-28 T 09-03-2017 LS838_RS05205 83a2870c7a3b5ed5c7cb304fe4ccbd30 457 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 450 7.9E-72 T 09-03-2017 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LS838_RS05205 83a2870c7a3b5ed5c7cb304fe4ccbd30 457 SUPERFAMILY SSF55021 298 362 9.84E-7 T 09-03-2017 LS838_RS05205 83a2870c7a3b5ed5c7cb304fe4ccbd30 457 Gene3D G3DSA:3.40.1160.10 1 54 6.8E-47 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase LS838_RS05205 83a2870c7a3b5ed5c7cb304fe4ccbd30 457 Gene3D G3DSA:3.40.1160.10 94 292 6.8E-47 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase LS838_RS05205 83a2870c7a3b5ed5c7cb304fe4ccbd30 457 SUPERFAMILY SSF55021 377 452 5.5E-18 T 09-03-2017 LS838_RS05205 83a2870c7a3b5ed5c7cb304fe4ccbd30 457 PIRSF PIRSF000726 1 456 3.7E-71 T 09-03-2017 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LS838_RS05205 83a2870c7a3b5ed5c7cb304fe4ccbd30 457 SUPERFAMILY SSF53633 1 291 1.7E-63 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase LS838_RS05205 83a2870c7a3b5ed5c7cb304fe4ccbd30 457 Pfam PF01842 ACT domain 395 441 1.1E-6 T 09-03-2017 IPR002912 ACT domain GO:0008152|GO:0016597 LS838_RS05205 83a2870c7a3b5ed5c7cb304fe4ccbd30 457 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 09-03-2017 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 LS838_RS05205 83a2870c7a3b5ed5c7cb304fe4ccbd30 457 Pfam PF00696 Amino acid kinase family 2 277 1.9E-39 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase LS838_RS06010 51d2aef19b2973715acd15dcab9d9040 74 Pfam PF03672 Uncharacterised protein family (UPF0154) 10 68 7.4E-28 T 09-03-2017 IPR005359 Protein with unknown function UPF0154 LS838_RS06010 51d2aef19b2973715acd15dcab9d9040 74 ProDom PD048972 UPF0154 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED FAMILY YNEF SUPERFAMILY MG335.1 EXPORTED MYCGA5700 26 62 9.0E-10 T 09-03-2017 IPR005359 Protein with unknown function UPF0154 LS838_RS06750 781347737d93de635dc87c14a806fc23 120 Gene3D G3DSA:3.50.50.60 3 104 2.8E-17 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS06750 781347737d93de635dc87c14a806fc23 120 SUPERFAMILY SSF51905 2 106 6.05E-12 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS06750 781347737d93de635dc87c14a806fc23 120 Pfam PF00890 FAD binding domain 2 103 1.8E-12 T 09-03-2017 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 LS838_RS07240 54fa352b5548623add32f972399f14f8 607 Gene3D G3DSA:3.40.50.300 15 166 2.2E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07240 54fa352b5548623add32f972399f14f8 607 SUPERFAMILY SSF48019 246 353 1.34E-7 T 09-03-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 LS838_RS07240 54fa352b5548623add32f972399f14f8 607 SMART SM00382 37 188 2.5E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS07240 54fa352b5548623add32f972399f14f8 607 Gene3D G3DSA:1.10.8.60 167 242 4.6E-31 T 09-03-2017 LS838_RS07240 54fa352b5548623add32f972399f14f8 607 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.9E-46 T 09-03-2017 LS838_RS07240 54fa352b5548623add32f972399f14f8 607 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 6.5E-6 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 LS838_RS07240 54fa352b5548623add32f972399f14f8 607 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 6.5E-6 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 LS838_RS07240 54fa352b5548623add32f972399f14f8 607 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 350 1.1E-137 T 09-03-2017 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 LS838_RS07240 54fa352b5548623add32f972399f14f8 607 SUPERFAMILY SSF52540 32 221 5.17E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07240 54fa352b5548623add32f972399f14f8 607 Gene3D G3DSA:1.20.272.10 243 351 2.0E-5 T 09-03-2017 LS838_RS04520 6c341c7d1139525ad3c0e167a324c960 302 SUPERFAMILY SSF53474 40 301 6.63E-35 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS04520 6c341c7d1139525ad3c0e167a324c960 302 Gene3D G3DSA:3.40.50.1820 36 299 3.9E-48 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS04520 6c341c7d1139525ad3c0e167a324c960 302 Pfam PF07859 alpha/beta hydrolase fold 71 280 3.5E-14 T 09-03-2017 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 LS838_RS02825 e4cb39b9b3d350c1489614638b1ea574 952 Pfam PF00005 ABC transporter 618 854 6.6E-11 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS02825 e4cb39b9b3d350c1489614638b1ea574 952 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS02825 e4cb39b9b3d350c1489614638b1ea574 952 SUPERFAMILY SSF52540 609 906 5.79E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02825 e4cb39b9b3d350c1489614638b1ea574 952 SUPERFAMILY SSF52540 8 206 1.44E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02825 e4cb39b9b3d350c1489614638b1ea574 952 SUPERFAMILY SSF52540 426 565 1.44E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02825 e4cb39b9b3d350c1489614638b1ea574 952 Gene3D G3DSA:1.20.1580.10 93 131 1.8E-53 T 09-03-2017 LS838_RS02825 e4cb39b9b3d350c1489614638b1ea574 952 Gene3D G3DSA:1.20.1580.10 250 283 1.8E-53 T 09-03-2017 LS838_RS02825 e4cb39b9b3d350c1489614638b1ea574 952 Gene3D G3DSA:1.20.1580.10 403 473 1.8E-53 T 09-03-2017 LS838_RS02825 e4cb39b9b3d350c1489614638b1ea574 952 ProSitePatterns PS00211 ABC transporters family signature. 824 838 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS02825 e4cb39b9b3d350c1489614638b1ea574 952 Gene3D G3DSA:1.20.1580.10 688 814 7.1E-57 T 09-03-2017 LS838_RS02825 e4cb39b9b3d350c1489614638b1ea574 952 Gene3D G3DSA:3.40.50.300 5 53 1.1E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02825 e4cb39b9b3d350c1489614638b1ea574 952 Gene3D G3DSA:3.40.50.300 474 591 1.1E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02825 e4cb39b9b3d350c1489614638b1ea574 952 Gene3D G3DSA:3.40.50.300 606 666 1.9E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02825 e4cb39b9b3d350c1489614638b1ea574 952 Gene3D G3DSA:3.40.50.300 815 935 1.9E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02825 e4cb39b9b3d350c1489614638b1ea574 952 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 919 0.0 T 09-03-2017 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 LS838_RS02825 e4cb39b9b3d350c1489614638b1ea574 952 Gene3D G3DSA:1.10.8.280 285 402 5.4E-37 T 09-03-2017 LS838_RS02825 e4cb39b9b3d350c1489614638b1ea574 952 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 934 22.535 T 09-03-2017 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 LS838_RS02825 e4cb39b9b3d350c1489614638b1ea574 952 Gene3D G3DSA:3.30.1490.20 132 155 1.6E-25 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LS838_RS02825 e4cb39b9b3d350c1489614638b1ea574 952 Gene3D G3DSA:3.30.1490.20 202 248 1.6E-25 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LS838_RS07405 2f36886153c7bc7684b17d26795b2843 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 225 1.8E-101 T 09-03-2017 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 LS838_RS07405 2f36886153c7bc7684b17d26795b2843 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 09-03-2017 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS07405 2f36886153c7bc7684b17d26795b2843 231 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 7.1E-53 T 09-03-2017 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein LS838_RS07405 2f36886153c7bc7684b17d26795b2843 231 SUPERFAMILY SSF56808 6 225 9.29E-83 T 09-03-2017 IPR023674 Ribosomal protein L1-like LS838_RS07405 2f36886153c7bc7684b17d26795b2843 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.443 T 09-03-2017 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 LS838_RS07405 2f36886153c7bc7684b17d26795b2843 231 Gene3D G3DSA:3.30.190.20 161 226 2.9E-44 T 09-03-2017 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 LS838_RS07405 2f36886153c7bc7684b17d26795b2843 231 Gene3D G3DSA:3.30.190.20 17 68 2.9E-44 T 09-03-2017 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 LS838_RS07405 2f36886153c7bc7684b17d26795b2843 231 Gene3D G3DSA:3.40.50.790 69 159 3.4E-41 T 09-03-2017 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich LS838_RS07405 2f36886153c7bc7684b17d26795b2843 231 PIRSF PIRSF002155 1 227 1.5E-78 T 09-03-2017 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS03290 07feb8ffffa7b0f92b3975622916e58f 573 Pfam PF06160 Septation ring formation regulator, EzrA 9 564 2.3E-148 T 09-03-2017 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 LS838_RS05920 241f6f08cc2835e4eb1cd7b2fe0fd41d 158 SUPERFAMILY SSF75420 5 86 3.27E-21 T 09-03-2017 IPR028989 Ribosome maturation factor RimP, N-terminal LS838_RS05920 241f6f08cc2835e4eb1cd7b2fe0fd41d 158 Gene3D G3DSA:2.30.30.180 90 156 1.5E-26 T 09-03-2017 IPR028998 Ribosome maturation factor RimP, C-terminal LS838_RS05920 241f6f08cc2835e4eb1cd7b2fe0fd41d 158 Pfam PF02576 Putative ribosome maturation factor RimP 12 153 7.7E-38 T 09-03-2017 IPR003728 Ribosome maturation factor RimP GO:0042274 LS838_RS05920 241f6f08cc2835e4eb1cd7b2fe0fd41d 158 Gene3D G3DSA:3.30.300.70 8 83 6.9E-23 T 09-03-2017 IPR028989 Ribosome maturation factor RimP, N-terminal LS838_RS05920 241f6f08cc2835e4eb1cd7b2fe0fd41d 158 SUPERFAMILY SSF74942 87 158 8.24E-19 T 09-03-2017 IPR028998 Ribosome maturation factor RimP, C-terminal LS838_RS05920 241f6f08cc2835e4eb1cd7b2fe0fd41d 158 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 158 22.073 T 09-03-2017 IPR003728 Ribosome maturation factor RimP GO:0042274 LS838_RS07910 a39e27eb255210d37dff14085246d0bd 476 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 2 473 9.9E-165 T 09-03-2017 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 LS838_RS07910 a39e27eb255210d37dff14085246d0bd 476 Pfam PF08323 Starch synthase catalytic domain 2 236 3.7E-80 T 09-03-2017 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 LS838_RS07910 a39e27eb255210d37dff14085246d0bd 476 Gene3D G3DSA:3.40.50.2000 252 455 8.6E-69 T 09-03-2017 LS838_RS07910 a39e27eb255210d37dff14085246d0bd 476 Pfam PF00534 Glycosyl transferases group 1 290 451 1.5E-13 T 09-03-2017 IPR001296 Glycosyl transferase, family 1 LS838_RS07910 a39e27eb255210d37dff14085246d0bd 476 Hamap MF_00484 Glycogen synthase [glgA]. 1 474 42.746 T 09-03-2017 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 LS838_RS07910 a39e27eb255210d37dff14085246d0bd 476 SUPERFAMILY SSF53756 5 476 5.58E-121 T 09-03-2017 LS838_RS06315 0f19d7cb3cd3ff57a11d8501621c5514 375 Gene3D G3DSA:3.40.640.10 9 257 1.9E-76 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LS838_RS06315 0f19d7cb3cd3ff57a11d8501621c5514 375 SUPERFAMILY SSF53383 42 374 3.84E-94 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase LS838_RS06315 0f19d7cb3cd3ff57a11d8501621c5514 375 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 200 214 - T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 LS838_RS06315 0f19d7cb3cd3ff57a11d8501621c5514 375 PIRSF PIRSF001434 1 375 3.0E-112 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 LS838_RS06315 0f19d7cb3cd3ff57a11d8501621c5514 375 Gene3D G3DSA:3.90.1150.10 258 373 4.9E-34 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LS838_RS06315 0f19d7cb3cd3ff57a11d8501621c5514 375 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 373 3.6E-118 T 09-03-2017 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 LS838_RS06810 87f604252a07e2a23e107ec9bcee0204 207 SUPERFAMILY SSF53271 15 206 9.44E-47 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS06810 87f604252a07e2a23e107ec9bcee0204 207 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 22 177 4.4E-44 T 09-03-2017 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LS838_RS06810 87f604252a07e2a23e107ec9bcee0204 207 Pfam PF00156 Phosphoribosyl transferase domain 45 143 1.5E-15 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 LS838_RS06810 87f604252a07e2a23e107ec9bcee0204 207 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 207 26.932 T 09-03-2017 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LS838_RS06810 87f604252a07e2a23e107ec9bcee0204 207 Gene3D G3DSA:3.40.50.2020 3 206 3.2E-52 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS09395 e062891cfefc462583d639c8a5fd9937 236 Pfam PF03591 AzlC protein 16 157 1.1E-36 T 09-03-2017 IPR011606 Branched-chain amino acid transport, permease LS838_RS00935 e2d611fc3e1b096e465ddebfc889bb8b 211 Pfam PF13411 MerR HTH family regulatory protein 8 75 9.7E-9 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS00935 e2d611fc3e1b096e465ddebfc889bb8b 211 SUPERFAMILY SSF46955 8 120 4.12E-11 T 09-03-2017 IPR009061 Putative DNA-binding domain LS838_RS00935 e2d611fc3e1b096e465ddebfc889bb8b 211 Gene3D G3DSA:1.10.1660.10 8 122 5.7E-12 T 09-03-2017 LS838_RS07935 1430f94e0308e3cb58aca36a17bfa63e 236 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 6 235 4.6E-73 T 09-03-2017 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 LS838_RS07935 1430f94e0308e3cb58aca36a17bfa63e 236 SUPERFAMILY SSF117856 6 235 2.51E-73 T 09-03-2017 LS838_RS07935 1430f94e0308e3cb58aca36a17bfa63e 236 Pfam PF03306 Alpha-acetolactate decarboxylase 7 223 7.1E-72 T 09-03-2017 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 LS838_RS07935 1430f94e0308e3cb58aca36a17bfa63e 236 PIRSF PIRSF001332 1 236 3.5E-80 T 09-03-2017 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 LS838_RS07935 1430f94e0308e3cb58aca36a17bfa63e 236 Gene3D G3DSA:3.30.1330.80 105 200 4.3E-39 T 09-03-2017 LS838_RS07935 1430f94e0308e3cb58aca36a17bfa63e 236 Gene3D G3DSA:3.30.1330.80 5 104 9.3E-33 T 09-03-2017 LS838_RS08605 4870f40866048d3c0186ed17e1a98f62 372 Pfam PF13439 Glycosyltransferase Family 4 33 182 6.7E-10 T 09-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 LS838_RS08605 4870f40866048d3c0186ed17e1a98f62 372 SUPERFAMILY SSF53756 5 340 1.05E-57 T 09-03-2017 LS838_RS08605 4870f40866048d3c0186ed17e1a98f62 372 Gene3D G3DSA:3.40.50.2000 168 308 7.8E-23 T 09-03-2017 LS838_RS08605 4870f40866048d3c0186ed17e1a98f62 372 Pfam PF00534 Glycosyl transferases group 1 192 308 4.8E-25 T 09-03-2017 IPR001296 Glycosyl transferase, family 1 LS838_RS01205 8c43aa70e9dba5845bdc8c0899e6a9bb 321 SUPERFAMILY SSF51735 3 152 1.21E-37 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS01205 8c43aa70e9dba5845bdc8c0899e6a9bb 321 SUPERFAMILY SSF55347 131 289 9.97E-14 T 09-03-2017 LS838_RS01205 8c43aa70e9dba5845bdc8c0899e6a9bb 321 Gene3D G3DSA:3.40.50.720 2 144 1.3E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS01205 8c43aa70e9dba5845bdc8c0899e6a9bb 321 Gene3D G3DSA:3.30.360.10 145 318 3.9E-47 T 09-03-2017 LS838_RS01205 8c43aa70e9dba5845bdc8c0899e6a9bb 321 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 2.7E-24 T 09-03-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 LS838_RS00945 63a5829cadeb35b0376c332f7565f3f6 264 PIRSF PIRSF031503 1 260 1.2E-64 T 09-03-2017 IPR014564 Uncharacterised conserved protein UCP031503, transmembrane LS838_RS00945 63a5829cadeb35b0376c332f7565f3f6 264 Pfam PF07907 YibE/F-like protein 6 243 3.1E-50 T 09-03-2017 IPR012507 YibE/F-like LS838_RS08925 1d117508e053ef6267d125305cba3c86 347 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 107 252 5.9E-33 T 09-03-2017 IPR004474 Cell envelope-related transcriptional attenuator domain LS838_RS08925 1d117508e053ef6267d125305cba3c86 347 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 108 252 2.3E-38 T 09-03-2017 IPR004474 Cell envelope-related transcriptional attenuator domain LS838_RS00500 16147983527550b0cc75f015c1bfe5d2 465 SUPERFAMILY SSF56176 11 225 2.01E-59 T 09-03-2017 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 LS838_RS00500 16147983527550b0cc75f015c1bfe5d2 465 Pfam PF01565 FAD binding domain 50 187 3.1E-36 T 09-03-2017 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 LS838_RS00500 16147983527550b0cc75f015c1bfe5d2 465 Gene3D G3DSA:3.30.43.10 8 104 6.3E-14 T 09-03-2017 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 LS838_RS00500 16147983527550b0cc75f015c1bfe5d2 465 SUPERFAMILY SSF55103 231 464 7.52E-48 T 09-03-2017 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 LS838_RS00500 16147983527550b0cc75f015c1bfe5d2 465 Pfam PF02913 FAD linked oxidases, C-terminal domain 232 461 8.3E-48 T 09-03-2017 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 LS838_RS00500 16147983527550b0cc75f015c1bfe5d2 465 Gene3D G3DSA:3.30.465.10 105 225 4.0E-43 T 09-03-2017 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 LS838_RS06780 eb98e584185cd9b725ca3558aa03bf82 405 Pfam PF05975 Bacterial ABC transporter protein EcsB 3 377 3.6E-97 T 09-03-2017 IPR010288 Bacterial ABC transporter EcsB GO:0016021 LS838_RS06780 eb98e584185cd9b725ca3558aa03bf82 405 PIRSF PIRSF037259 1 396 6.9E-99 T 09-03-2017 IPR010288 Bacterial ABC transporter EcsB GO:0016021 LS838_RS00010 f7f8aef0195d6f687cdddf735018cfe4 375 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 123 6.7E-28 T 09-03-2017 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS00010 f7f8aef0195d6f687cdddf735018cfe4 375 Gene3D G3DSA:3.10.150.10 127 250 6.2E-35 T 09-03-2017 LS838_RS00010 f7f8aef0195d6f687cdddf735018cfe4 375 SUPERFAMILY SSF55979 1 123 6.28E-21 T 09-03-2017 LS838_RS00010 f7f8aef0195d6f687cdddf735018cfe4 375 Gene3D G3DSA:3.10.150.10 252 374 2.3E-25 T 09-03-2017 LS838_RS00010 f7f8aef0195d6f687cdddf735018cfe4 375 PIRSF PIRSF000804 1 375 2.7E-104 T 09-03-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS00010 f7f8aef0195d6f687cdddf735018cfe4 375 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 374 6.9E-92 T 09-03-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS00010 f7f8aef0195d6f687cdddf735018cfe4 375 Pfam PF02767 DNA polymerase III beta subunit, central domain 132 246 1.1E-32 T 09-03-2017 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS00010 f7f8aef0195d6f687cdddf735018cfe4 375 SUPERFAMILY SSF55979 128 246 3.77E-25 T 09-03-2017 LS838_RS00010 f7f8aef0195d6f687cdddf735018cfe4 375 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 249 373 1.1E-20 T 09-03-2017 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS00010 f7f8aef0195d6f687cdddf735018cfe4 375 SMART SM00480 17 370 7.4E-115 T 09-03-2017 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS00010 f7f8aef0195d6f687cdddf735018cfe4 375 SUPERFAMILY SSF55979 248 374 1.48E-22 T 09-03-2017 LS838_RS00010 f7f8aef0195d6f687cdddf735018cfe4 375 Gene3D G3DSA:3.10.150.10 1 125 1.7E-24 T 09-03-2017 LS838_RS03205 0844ba08229d507c446f4ad2673013af 74 PRINTS PR00124 ATP synthase C subunit signature 9 28 5.1E-16 T 09-03-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 LS838_RS03205 0844ba08229d507c446f4ad2673013af 74 PRINTS PR00124 ATP synthase C subunit signature 30 45 5.1E-16 T 09-03-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 LS838_RS03205 0844ba08229d507c446f4ad2673013af 74 PRINTS PR00124 ATP synthase C subunit signature 47 72 5.1E-16 T 09-03-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 LS838_RS03205 0844ba08229d507c446f4ad2673013af 74 Pfam PF00137 ATP synthase subunit C 8 71 1.1E-14 T 09-03-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 LS838_RS03205 0844ba08229d507c446f4ad2673013af 74 Hamap MF_01396 ATP synthase subunit c [atpH]. 6 74 15.259 T 09-03-2017 LS838_RS03205 0844ba08229d507c446f4ad2673013af 74 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 17 73 6.9E-24 T 09-03-2017 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 LS838_RS03205 0844ba08229d507c446f4ad2673013af 74 Gene3D G3DSA:1.20.20.10 3 73 1.4E-28 T 09-03-2017 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 LS838_RS03205 0844ba08229d507c446f4ad2673013af 74 SUPERFAMILY SSF81333 2 73 5.62E-20 T 09-03-2017 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 LS838_RS03205 0844ba08229d507c446f4ad2673013af 74 ProSitePatterns PS00605 ATP synthase c subunit signature. 37 58 - T 09-03-2017 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210 LS838_RS01255 f1088ecd91a35c07ec0f73065e2fe6a8 57 Pfam PF13451 Probable zinc-ribbon domain 2 48 4.0E-26 T 09-03-2017 IPR025306 Probable zinc-binding domain LS838_RS05135 a138edab9ccf887a4e614563903c4b89 154 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 15 98 3.8E-4 T 09-03-2017 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 LS838_RS05135 a138edab9ccf887a4e614563903c4b89 154 Gene3D G3DSA:2.30.110.10 20 154 2.4E-27 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 LS838_RS05135 a138edab9ccf887a4e614563903c4b89 154 SUPERFAMILY SSF50475 25 138 1.29E-10 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 LS838_RS04090 616091f309502513d9dac4f7033054b8 319 SUPERFAMILY SSF53901 3 318 1.11E-57 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LS838_RS04090 616091f309502513d9dac4f7033054b8 319 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 230 318 6.1E-31 T 09-03-2017 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 LS838_RS04090 616091f309502513d9dac4f7033054b8 319 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 319 64.949 T 09-03-2017 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 LS838_RS04090 616091f309502513d9dac4f7033054b8 319 Gene3D G3DSA:3.40.47.10 4 156 3.7E-51 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LS838_RS04090 616091f309502513d9dac4f7033054b8 319 Gene3D G3DSA:3.40.47.10 157 318 6.2E-47 T 09-03-2017 IPR016039 Thiolase-like GO:0003824|GO:0008152 LS838_RS04090 616091f309502513d9dac4f7033054b8 319 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 318 1.2E-90 T 09-03-2017 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 LS838_RS04090 616091f309502513d9dac4f7033054b8 319 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 104 181 7.8E-26 T 09-03-2017 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 LS838_RS05200 e1d726c17b9096da4eaab197e76028e8 237 SUPERFAMILY SSF51161 90 223 1.74E-48 T 09-03-2017 IPR011004 Trimeric LpxA-like LS838_RS05200 e1d726c17b9096da4eaab197e76028e8 237 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 92 120 2.0E-4 T 09-03-2017 IPR001451 Hexapeptide repeat LS838_RS05200 e1d726c17b9096da4eaab197e76028e8 237 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 157 2.0E-8 T 09-03-2017 IPR001451 Hexapeptide repeat LS838_RS05200 e1d726c17b9096da4eaab197e76028e8 237 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 175 203 - T 09-03-2017 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 LS838_RS05200 e1d726c17b9096da4eaab197e76028e8 237 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 1 236 44.892 T 09-03-2017 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 LS838_RS05200 e1d726c17b9096da4eaab197e76028e8 237 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 6 237 1.9E-113 T 09-03-2017 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 LS838_RS05200 e1d726c17b9096da4eaab197e76028e8 237 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 4 88 2.1E-29 T 09-03-2017 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 LS838_RS05200 e1d726c17b9096da4eaab197e76028e8 237 Gene3D G3DSA:3.30.70.250 1 88 2.7E-30 T 09-03-2017 LS838_RS05200 e1d726c17b9096da4eaab197e76028e8 237 Gene3D G3DSA:2.160.10.10 89 226 1.6E-47 T 09-03-2017 LS838_RS05200 e1d726c17b9096da4eaab197e76028e8 237 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 166 201 5.4E-10 T 09-03-2017 IPR001451 Hexapeptide repeat LS838_RS03140 9f3ab54ccda1bc78124e799da76fe496 446 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 406 423 - T 09-03-2017 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS03140 9f3ab54ccda1bc78124e799da76fe496 446 Pfam PF00342 Phosphoglucose isomerase 77 423 2.8E-21 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS03140 9f3ab54ccda1bc78124e799da76fe496 446 SUPERFAMILY SSF53697 6 445 4.59E-134 T 09-03-2017 LS838_RS03140 9f3ab54ccda1bc78124e799da76fe496 446 PRINTS PR00662 Glucose-6-phosphate isomerase signature 374 392 2.1E-23 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS03140 9f3ab54ccda1bc78124e799da76fe496 446 PRINTS PR00662 Glucose-6-phosphate isomerase signature 196 214 2.1E-23 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS03140 9f3ab54ccda1bc78124e799da76fe496 446 PRINTS PR00662 Glucose-6-phosphate isomerase signature 77 96 2.1E-23 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS03140 9f3ab54ccda1bc78124e799da76fe496 446 PRINTS PR00662 Glucose-6-phosphate isomerase signature 392 406 2.1E-23 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS03140 9f3ab54ccda1bc78124e799da76fe496 446 PRINTS PR00662 Glucose-6-phosphate isomerase signature 271 292 2.1E-23 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS03140 9f3ab54ccda1bc78124e799da76fe496 446 PRINTS PR00662 Glucose-6-phosphate isomerase signature 406 419 2.1E-23 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS03140 9f3ab54ccda1bc78124e799da76fe496 446 Gene3D G3DSA:3.40.50.10490 69 197 1.3E-23 T 09-03-2017 LS838_RS03140 9f3ab54ccda1bc78124e799da76fe496 446 Gene3D G3DSA:3.40.50.10490 198 415 2.0E-90 T 09-03-2017 LS838_RS03140 9f3ab54ccda1bc78124e799da76fe496 446 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 200 213 - T 09-03-2017 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS03140 9f3ab54ccda1bc78124e799da76fe496 446 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 2 433 23.684 T 09-03-2017 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS07140 a87dfb2c17efc49c29611cae16bdb845 197 SUPERFAMILY SSF46929 151 194 1.7E-7 T 09-03-2017 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 LS838_RS07140 a87dfb2c17efc49c29611cae16bdb845 197 Gene3D G3DSA:2.40.50.140 1 60 5.5E-20 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS07140 a87dfb2c17efc49c29611cae16bdb845 197 Gene3D G3DSA:1.10.150.20 64 138 3.4E-26 T 09-03-2017 LS838_RS07140 a87dfb2c17efc49c29611cae16bdb845 197 SUPERFAMILY SSF47781 63 135 6.23E-19 T 09-03-2017 IPR010994 RuvA domain 2-like LS838_RS07140 a87dfb2c17efc49c29611cae16bdb845 197 SMART SM00278 70 89 1.8 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LS838_RS07140 a87dfb2c17efc49c29611cae16bdb845 197 SMART SM00278 105 124 1.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LS838_RS07140 a87dfb2c17efc49c29611cae16bdb845 197 Pfam PF01330 RuvA N terminal domain 1 59 2.5E-18 T 09-03-2017 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 LS838_RS07140 a87dfb2c17efc49c29611cae16bdb845 197 Pfam PF14520 Helix-hairpin-helix domain 69 126 7.7E-13 T 09-03-2017 LS838_RS07140 a87dfb2c17efc49c29611cae16bdb845 197 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 195 27.746 T 09-03-2017 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 LS838_RS07140 a87dfb2c17efc49c29611cae16bdb845 197 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 3 192 8.6E-46 T 09-03-2017 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 LS838_RS07140 a87dfb2c17efc49c29611cae16bdb845 197 SUPERFAMILY SSF50249 1 60 5.71E-14 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS07140 a87dfb2c17efc49c29611cae16bdb845 197 Pfam PF07499 RuvA, C-terminal domain 151 194 1.1E-10 T 09-03-2017 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 LS838_RS07140 a87dfb2c17efc49c29611cae16bdb845 197 Gene3D G3DSA:1.10.8.10 151 193 3.9E-10 T 09-03-2017 LS838_RS03590 f9e19f3891c7b47f18eb79d130afae3a 549 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 468 1.2E-76 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain LS838_RS03590 f9e19f3891c7b47f18eb79d130afae3a 549 Gene3D G3DSA:3.90.76.10 49 218 9.6E-44 T 09-03-2017 LS838_RS03590 f9e19f3891c7b47f18eb79d130afae3a 549 Gene3D G3DSA:3.10.105.10 291 519 2.7E-44 T 09-03-2017 LS838_RS03590 f9e19f3891c7b47f18eb79d130afae3a 549 Gene3D G3DSA:3.40.190.10 5 48 2.9E-4 T 09-03-2017 LS838_RS03590 f9e19f3891c7b47f18eb79d130afae3a 549 PIRSF PIRSF002741 1 549 1.5E-89 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LS838_RS03590 f9e19f3891c7b47f18eb79d130afae3a 549 SUPERFAMILY SSF53850 35 548 4.01E-115 T 09-03-2017 LS838_RS04450 0b523be0d84a5b27301a9772587bb224 827 TIGRFAM TIGR01061 parC_Gpos: DNA topoisomerase IV, A subunit 8 755 0.0 T 09-03-2017 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LS838_RS04450 0b523be0d84a5b27301a9772587bb224 827 SMART SM00434 11 464 1.1E-242 T 09-03-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS04450 0b523be0d84a5b27301a9772587bb224 827 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 663 707 1.7E-7 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LS838_RS04450 0b523be0d84a5b27301a9772587bb224 827 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 551 598 0.0042 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LS838_RS04450 0b523be0d84a5b27301a9772587bb224 827 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 719 760 0.14 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LS838_RS04450 0b523be0d84a5b27301a9772587bb224 827 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 610 655 0.14 T 09-03-2017 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 LS838_RS04450 0b523be0d84a5b27301a9772587bb224 827 Gene3D G3DSA:3.30.1360.40 236 332 3.1E-34 T 09-03-2017 IPR024946 Arginine repressor C-terminal-like domain LS838_RS04450 0b523be0d84a5b27301a9772587bb224 827 SUPERFAMILY SSF101904 500 808 1.96E-70 T 09-03-2017 LS838_RS04450 0b523be0d84a5b27301a9772587bb224 827 SUPERFAMILY SSF56719 31 486 2.49E-163 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 LS838_RS04450 0b523be0d84a5b27301a9772587bb224 827 Gene3D G3DSA:3.90.199.10 333 398 2.9E-110 T 09-03-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 LS838_RS04450 0b523be0d84a5b27301a9772587bb224 827 Gene3D G3DSA:3.90.199.10 30 235 2.9E-110 T 09-03-2017 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 LS838_RS04450 0b523be0d84a5b27301a9772587bb224 827 Hamap MF_00937 DNA topoisomerase 4 subunit A [parC]. 7 813 32.237 T 09-03-2017 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LS838_RS04450 0b523be0d84a5b27301a9772587bb224 827 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 471 1.5E-147 T 09-03-2017 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS04450 0b523be0d84a5b27301a9772587bb224 827 Gene3D G3DSA:2.120.10.90 499 806 2.7E-64 T 09-03-2017 LS838_RS04525 7a09948da8dd5926c25aec234b2120d8 333 SUPERFAMILY SSF51735 104 301 4.68E-50 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS04525 7a09948da8dd5926c25aec234b2120d8 333 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 300 1.6E-55 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LS838_RS04525 7a09948da8dd5926c25aec234b2120d8 333 Gene3D G3DSA:3.40.50.720 2 114 7.7E-16 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS04525 7a09948da8dd5926c25aec234b2120d8 333 Gene3D G3DSA:3.40.50.720 115 299 1.2E-54 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS04525 7a09948da8dd5926c25aec234b2120d8 333 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 197 219 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LS838_RS04525 7a09948da8dd5926c25aec234b2120d8 333 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LS838_RS04525 7a09948da8dd5926c25aec234b2120d8 333 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 332 9.7E-27 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LS838_RS04525 7a09948da8dd5926c25aec234b2120d8 333 SUPERFAMILY SSF52283 1 128 1.28E-28 T 09-03-2017 LS838_RS03340 0ceee8a7d41bac6cf8f36cab6dc1201f 179 Pfam PF04093 rod shape-determining protein MreD 1 161 2.4E-9 T 09-03-2017 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 LS838_RS07585 7c3abe518fe0b4378336e4d54f779724 186 Pfam PF07155 ECF-type riboflavin transporter, S component 7 174 3.1E-46 T 09-03-2017 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 LS838_RS07585 7c3abe518fe0b4378336e4d54f779724 186 Hamap MF_01572 UPF0397 protein . 6 186 26.339 T 09-03-2017 IPR022914 Protein of unknown function UPF0397 LS838_RS01285 c151c640c6e49ba9e6d4367e3ad33bfd 542 SUPERFAMILY SSF53850 35 541 2.76E-108 T 09-03-2017 LS838_RS01285 c151c640c6e49ba9e6d4367e3ad33bfd 542 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 465 3.8E-65 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain LS838_RS01285 c151c640c6e49ba9e6d4367e3ad33bfd 542 PIRSF PIRSF002741 1 541 1.5E-84 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LS838_RS01285 c151c640c6e49ba9e6d4367e3ad33bfd 542 Gene3D G3DSA:3.10.105.10 291 513 2.7E-43 T 09-03-2017 LS838_RS01285 c151c640c6e49ba9e6d4367e3ad33bfd 542 Gene3D G3DSA:3.90.76.10 46 218 3.6E-43 T 09-03-2017 LS838_RS09140 886feab986b6081e47da881bbf8c94e0 274 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 16 191 3.0E-59 T 09-03-2017 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 LS838_RS09140 886feab986b6081e47da881bbf8c94e0 274 Gene3D G3DSA:3.90.1530.10 12 113 1.6E-38 T 09-03-2017 LS838_RS09140 886feab986b6081e47da881bbf8c94e0 274 Pfam PF02195 ParB-like nuclease domain 20 106 8.5E-29 T 09-03-2017 IPR003115 ParB/Sulfiredoxin LS838_RS09140 886feab986b6081e47da881bbf8c94e0 274 SUPERFAMILY SSF110849 18 109 5.75E-29 T 09-03-2017 IPR003115 ParB/Sulfiredoxin LS838_RS09140 886feab986b6081e47da881bbf8c94e0 274 SUPERFAMILY SSF109709 101 206 3.92E-33 T 09-03-2017 LS838_RS09140 886feab986b6081e47da881bbf8c94e0 274 TIGRFAM TIGR04285 nucleoid_noc: nucleoid occlusion protein 16 266 4.8E-104 T 09-03-2017 IPR023705 Nucleoid occlusion protein LS838_RS09140 886feab986b6081e47da881bbf8c94e0 274 SMART SM00470 18 107 5.7E-35 T 09-03-2017 IPR003115 ParB/Sulfiredoxin LS838_RS00995 540e98d8a1683832a620e8ad44fa21a4 368 Pfam PF00005 ABC transporter 23 163 4.6E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS00995 540e98d8a1683832a620e8ad44fa21a4 368 Gene3D G3DSA:3.40.50.300 3 236 4.9E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00995 540e98d8a1683832a620e8ad44fa21a4 368 Pfam PF08402 TOBE domain 284 358 8.5E-6 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LS838_RS00995 540e98d8a1683832a620e8ad44fa21a4 368 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS00995 540e98d8a1683832a620e8ad44fa21a4 368 Gene3D G3DSA:2.40.50.140 288 350 3.0E-9 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS00995 540e98d8a1683832a620e8ad44fa21a4 368 SMART SM00382 30 213 1.2E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS00995 540e98d8a1683832a620e8ad44fa21a4 368 SUPERFAMILY SSF52540 4 246 3.19E-85 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00995 540e98d8a1683832a620e8ad44fa21a4 368 SUPERFAMILY SSF50331 238 366 1.24E-23 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal LS838_RS00995 540e98d8a1683832a620e8ad44fa21a4 368 Gene3D G3DSA:2.40.50.100 352 367 2.8E-22 T 09-03-2017 LS838_RS00995 540e98d8a1683832a620e8ad44fa21a4 368 Gene3D G3DSA:2.40.50.100 241 287 2.8E-22 T 09-03-2017 LS838_RS07785 23935e8313832b5d91a55b14e290eb21 455 Gene3D G3DSA:1.10.40.30 408 454 6.2E-16 T 09-03-2017 LS838_RS07785 23935e8313832b5d91a55b14e290eb21 455 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 09-03-2017 IPR020557 Fumarate lyase, conserved site GO:0003824 LS838_RS07785 23935e8313832b5d91a55b14e290eb21 455 Gene3D G3DSA:1.10.275.10 5 139 2.9E-52 T 09-03-2017 IPR024083 Fumarase/histidase, N-terminal LS838_RS07785 23935e8313832b5d91a55b14e290eb21 455 Pfam PF00206 Lyase 13 342 3.1E-95 T 09-03-2017 IPR022761 Fumarate lyase, N-terminal LS838_RS07785 23935e8313832b5d91a55b14e290eb21 455 Pfam PF10415 Fumarase C C-terminus 408 454 9.6E-16 T 09-03-2017 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 LS838_RS07785 23935e8313832b5d91a55b14e290eb21 455 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 5.8E-31 T 09-03-2017 IPR000362 Fumarate lyase family LS838_RS07785 23935e8313832b5d91a55b14e290eb21 455 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 5.8E-31 T 09-03-2017 IPR000362 Fumarate lyase family LS838_RS07785 23935e8313832b5d91a55b14e290eb21 455 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 5.8E-31 T 09-03-2017 IPR000362 Fumarate lyase family LS838_RS07785 23935e8313832b5d91a55b14e290eb21 455 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 5.8E-31 T 09-03-2017 IPR000362 Fumarate lyase family LS838_RS07785 23935e8313832b5d91a55b14e290eb21 455 SUPERFAMILY SSF48557 6 454 9.11E-133 T 09-03-2017 IPR008948 L-Aspartase-like GO:0003824 LS838_RS07785 23935e8313832b5d91a55b14e290eb21 455 Gene3D G3DSA:1.20.200.10 140 400 2.2E-86 T 09-03-2017 LS838_RS01095 672c585382bc372412e6a35fce642f18 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 269 1.1E-17 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS01095 672c585382bc372412e6a35fce642f18 270 SUPERFAMILY SSF161098 74 261 3.92E-33 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS01095 672c585382bc372412e6a35fce642f18 270 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 19 269 2.7E-77 T 09-03-2017 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 LS838_RS01095 672c585382bc372412e6a35fce642f18 270 Gene3D G3DSA:1.10.3720.10 74 269 5.9E-28 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS03075 eaedc198946452b3cb43d4dee77f79bd 323 Gene3D G3DSA:3.30.450.90 3 107 6.2E-24 T 09-03-2017 LS838_RS03075 eaedc198946452b3cb43d4dee77f79bd 323 Gene3D G3DSA:3.40.50.300 131 274 6.2E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03075 eaedc198946452b3cb43d4dee77f79bd 323 SUPERFAMILY SSF52540 7 317 1.35E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03075 eaedc198946452b3cb43d4dee77f79bd 323 Pfam PF00437 Type II/IV secretion system protein 11 262 6.0E-48 T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LS838_RS03075 eaedc198946452b3cb43d4dee77f79bd 323 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 196 210 - T 09-03-2017 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 LS838_RS02515 14e81497bd4e7b38891ba1d07d2d8242 416 Pfam PF06838 Methionine gamma-lyase 10 412 4.3E-171 T 09-03-2017 IPR009651 Putative methionine gamma-lyase LS838_RS02515 14e81497bd4e7b38891ba1d07d2d8242 416 SUPERFAMILY SSF53383 32 367 7.45E-37 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase LS838_RS02515 14e81497bd4e7b38891ba1d07d2d8242 416 Gene3D G3DSA:3.40.640.10 41 266 2.8E-28 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LS838_RS07480 ec2dff898aeeb99f91e03bf16fbb941c 291 Pfam PF03466 LysR substrate binding domain 90 277 2.7E-35 T 09-03-2017 IPR005119 LysR, substrate-binding LS838_RS07480 ec2dff898aeeb99f91e03bf16fbb941c 291 Gene3D G3DSA:1.10.10.10 6 84 7.3E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS07480 ec2dff898aeeb99f91e03bf16fbb941c 291 Gene3D G3DSA:3.40.190.10 190 262 1.1E-4 T 09-03-2017 LS838_RS07480 ec2dff898aeeb99f91e03bf16fbb941c 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.5E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS07480 ec2dff898aeeb99f91e03bf16fbb941c 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.5E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS07480 ec2dff898aeeb99f91e03bf16fbb941c 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.5E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS07480 ec2dff898aeeb99f91e03bf16fbb941c 291 Gene3D G3DSA:3.40.190.10 90 189 9.6E-21 T 09-03-2017 LS838_RS07480 ec2dff898aeeb99f91e03bf16fbb941c 291 SUPERFAMILY SSF53850 89 289 4.47E-33 T 09-03-2017 LS838_RS07480 ec2dff898aeeb99f91e03bf16fbb941c 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 6.3E-19 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS07480 ec2dff898aeeb99f91e03bf16fbb941c 291 SUPERFAMILY SSF46785 7 83 4.62E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS01990 06d708b05c37bac9e66e476e7713434b 262 Pfam PF01416 tRNA pseudouridine synthase 11 106 1.2E-8 T 09-03-2017 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS01990 06d708b05c37bac9e66e476e7713434b 262 Pfam PF01416 tRNA pseudouridine synthase 146 250 6.7E-24 T 09-03-2017 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS01990 06d708b05c37bac9e66e476e7713434b 262 SUPERFAMILY SSF55120 4 257 1.41E-79 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS01990 06d708b05c37bac9e66e476e7713434b 262 Gene3D G3DSA:3.30.70.580 2 107 1.4E-33 T 09-03-2017 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS01990 06d708b05c37bac9e66e476e7713434b 262 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 3 249 35.058 T 09-03-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS01990 06d708b05c37bac9e66e476e7713434b 262 PIRSF PIRSF001430 2 259 3.1E-73 T 09-03-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS01990 06d708b05c37bac9e66e476e7713434b 262 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 6 244 1.7E-60 T 09-03-2017 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS01990 06d708b05c37bac9e66e476e7713434b 262 Gene3D G3DSA:3.30.70.660 110 247 2.4E-40 T 09-03-2017 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS02485 8b5f280726bbc4c5c525e3399ad1efb9 439 PIRSF PIRSF006351 1 433 3.9E-111 T 09-03-2017 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 LS838_RS02485 8b5f280726bbc4c5c525e3399ad1efb9 439 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 426 2.9E-86 T 09-03-2017 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 LS838_RS02485 8b5f280726bbc4c5c525e3399ad1efb9 439 Pfam PF02378 Phosphotransferase system, EIIC 29 357 6.4E-35 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LS838_RS05450 e4d2c6dc963abe1cf5e886f1e0621221 290 SMART SM00342 201 284 8.7E-20 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LS838_RS05450 e4d2c6dc963abe1cf5e886f1e0621221 290 Gene3D G3DSA:1.10.10.60 191 232 2.3E-5 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS05450 e4d2c6dc963abe1cf5e886f1e0621221 290 Pfam PF12833 Helix-turn-helix domain 207 285 2.0E-16 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LS838_RS05450 e4d2c6dc963abe1cf5e886f1e0621221 290 SUPERFAMILY SSF46689 238 285 2.69E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS05450 e4d2c6dc963abe1cf5e886f1e0621221 290 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 238 280 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LS838_RS05450 e4d2c6dc963abe1cf5e886f1e0621221 290 Gene3D G3DSA:1.10.10.60 237 286 2.0E-14 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS00820 532fed969450d745c7e0511e021313aa 303 SMART SM00507 146 195 5.8E-7 T 09-03-2017 IPR003615 HNH nuclease LS838_RS00820 532fed969450d745c7e0511e021313aa 303 Pfam PF01844 HNH endonuclease 159 199 6.5E-10 T 09-03-2017 IPR002711 HNH endonuclease GO:0003676|GO:0004519 LS838_RS09360 4733892c3fe61de8d1667a2e13eb8669 219 Pfam PF00376 MerR family regulatory protein 6 42 3.3E-12 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS09360 4733892c3fe61de8d1667a2e13eb8669 219 Gene3D G3DSA:1.10.1660.10 2 50 4.5E-12 T 09-03-2017 LS838_RS09360 4733892c3fe61de8d1667a2e13eb8669 219 SUPERFAMILY SSF53041 65 198 2.88E-22 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS09360 4733892c3fe61de8d1667a2e13eb8669 219 Gene3D G3DSA:3.40.50.1390 65 184 1.5E-18 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS09360 4733892c3fe61de8d1667a2e13eb8669 219 SMART SM00422 5 67 2.3E-7 T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS09360 4733892c3fe61de8d1667a2e13eb8669 219 ProSitePatterns PS00552 MerR-type HTH domain signature. 8 30 - T 09-03-2017 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 LS838_RS09360 4733892c3fe61de8d1667a2e13eb8669 219 ProSitePatterns PS00397 Site-specific recombinases active site. 68 76 - T 09-03-2017 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 LS838_RS09360 4733892c3fe61de8d1667a2e13eb8669 219 SMART SM00857 65 205 4.4E-22 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS09360 4733892c3fe61de8d1667a2e13eb8669 219 SUPERFAMILY SSF46955 5 51 1.51E-11 T 09-03-2017 IPR009061 Putative DNA-binding domain LS838_RS09360 4733892c3fe61de8d1667a2e13eb8669 219 Pfam PF00239 Resolvase, N terminal domain 66 196 8.6E-21 T 09-03-2017 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 LS838_RS09345 b21ff6e25e832e3a325397e36fa0ac66 252 Gene3D G3DSA:3.90.190.10 13 184 7.6E-16 T 09-03-2017 IPR029021 Protein-tyrosine phosphatase-like LS838_RS09345 b21ff6e25e832e3a325397e36fa0ac66 252 Pfam PF13350 Tyrosine phosphatase family 7 252 1.4E-54 T 09-03-2017 IPR026893 Tyrosine/serine-protein phosphatase IphP-type LS838_RS09345 b21ff6e25e832e3a325397e36fa0ac66 252 SUPERFAMILY SSF52799 7 251 2.97E-44 T 09-03-2017 IPR029021 Protein-tyrosine phosphatase-like LS838_RS01945 e231c37ca43a540e41bb6dd43468cccb 73 Gene3D G3DSA:2.40.50.140 2 71 1.0E-38 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS01945 e231c37ca43a540e41bb6dd43468cccb 73 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 6.4E-29 T 09-03-2017 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 LS838_RS01945 e231c37ca43a540e41bb6dd43468cccb 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 73 27.627 T 09-03-2017 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 LS838_RS01945 e231c37ca43a540e41bb6dd43468cccb 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.8E-39 T 09-03-2017 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 LS838_RS01945 e231c37ca43a540e41bb6dd43468cccb 73 SMART SM00316 4 72 1.2E-5 T 09-03-2017 IPR022967 RNA-binding domain, S1 LS838_RS01945 e231c37ca43a540e41bb6dd43468cccb 73 SUPERFAMILY SSF50249 1 71 5.78E-28 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS04930 6a7d6b785e9904e8a8d5d6763e9032da 153 Gene3D G3DSA:1.10.10.10 16 145 3.8E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS04930 6a7d6b785e9904e8a8d5d6763e9032da 153 SUPERFAMILY SSF46785 10 145 1.61E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS04930 6a7d6b785e9904e8a8d5d6763e9032da 153 SMART SM00347 26 126 5.6E-4 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LS838_RS04930 6a7d6b785e9904e8a8d5d6763e9032da 153 ProSitePatterns PS01117 MarR-type HTH domain signature. 65 99 - T 09-03-2017 IPR023187 Transcriptional regulator MarR-type, conserved site LS838_RS04930 6a7d6b785e9904e8a8d5d6763e9032da 153 Pfam PF12802 MarR family 32 89 5.3E-8 T 09-03-2017 LS838_RS03315 4805ee6540a01d1fb286de1651cdf12b 421 SUPERFAMILY SSF53623 5 286 5.8E-77 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LS838_RS03315 4805ee6540a01d1fb286de1651cdf12b 421 Pfam PF08245 Mur ligase middle domain 47 204 1.9E-11 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LS838_RS03315 4805ee6540a01d1fb286de1651cdf12b 421 TIGRFAM TIGR01499 folC: bifunctional protein FolC 27 418 4.0E-98 T 09-03-2017 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 LS838_RS03315 4805ee6540a01d1fb286de1651cdf12b 421 Gene3D G3DSA:3.40.1190.10 5 289 4.8E-78 T 09-03-2017 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 LS838_RS03315 4805ee6540a01d1fb286de1651cdf12b 421 SUPERFAMILY SSF53244 288 418 1.52E-21 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LS838_RS03315 4805ee6540a01d1fb286de1651cdf12b 421 PIRSF PIRSF001563 1 421 1.0E-104 T 09-03-2017 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 LS838_RS03315 4805ee6540a01d1fb286de1651cdf12b 421 Gene3D G3DSA:3.90.190.20 290 420 5.2E-26 T 09-03-2017 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 LS838_RS05315 39b2685f1dd5350651fcdec70a9fa343 476 Pfam PF00171 Aldehyde dehydrogenase family 13 470 3.5E-151 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LS838_RS05315 39b2685f1dd5350651fcdec70a9fa343 476 Gene3D G3DSA:3.40.605.10 4 264 5.1E-86 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LS838_RS05315 39b2685f1dd5350651fcdec70a9fa343 476 SUPERFAMILY SSF53720 4 473 3.67E-143 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LS838_RS05315 39b2685f1dd5350651fcdec70a9fa343 476 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 09-03-2017 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 LS838_RS05315 39b2685f1dd5350651fcdec70a9fa343 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 09-03-2017 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 LS838_RS05315 39b2685f1dd5350651fcdec70a9fa343 476 Gene3D G3DSA:3.40.309.10 265 444 4.3E-64 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LS838_RS00900 90e63bc7a40d9af0e44b2c6f5c6cabc4 219 SUPERFAMILY SSF53474 3 218 7.67E-41 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS00900 90e63bc7a40d9af0e44b2c6f5c6cabc4 219 Gene3D G3DSA:3.40.50.1820 3 219 8.1E-39 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS00900 90e63bc7a40d9af0e44b2c6f5c6cabc4 219 Pfam PF00561 alpha/beta hydrolase fold 20 116 2.6E-11 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 LS838_RS01595 9f4aff3059f5dfaf745ba5d58d0ab4e1 276 Pfam PF00156 Phosphoribosyl transferase domain 114 256 1.5E-19 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 LS838_RS01595 9f4aff3059f5dfaf745ba5d58d0ab4e1 276 Gene3D G3DSA:3.40.50.2020 80 261 1.2E-51 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS01595 9f4aff3059f5dfaf745ba5d58d0ab4e1 276 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 1 268 1.7E-100 T 09-03-2017 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 LS838_RS01595 9f4aff3059f5dfaf745ba5d58d0ab4e1 276 Gene3D G3DSA:1.10.10.10 1 71 1.4E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS01595 9f4aff3059f5dfaf745ba5d58d0ab4e1 276 SUPERFAMILY SSF53271 82 257 1.85E-34 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS01595 9f4aff3059f5dfaf745ba5d58d0ab4e1 276 Pfam PF09182 Bacterial purine repressor, N-terminal 2 71 3.1E-29 T 09-03-2017 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 LS838_RS01595 9f4aff3059f5dfaf745ba5d58d0ab4e1 276 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 7 71 1.0E-30 T 09-03-2017 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 LS838_RS01595 9f4aff3059f5dfaf745ba5d58d0ab4e1 276 SUPERFAMILY SSF46785 1 72 1.69E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS05355 ae315e1e0477d693526ffe954444dd22 167 Pfam PF13508 Acetyltransferase (GNAT) domain 43 144 2.1E-14 T 09-03-2017 IPR000182 GNAT domain GO:0008080 LS838_RS05355 ae315e1e0477d693526ffe954444dd22 167 SUPERFAMILY SSF55729 1 161 1.33E-25 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS05355 ae315e1e0477d693526ffe954444dd22 167 Gene3D G3DSA:3.40.630.30 2 163 3.6E-37 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS01940 26c9cb1061409c90d4b1aa7721d74d2b 217 Pfam PF05191 Adenylate kinase, active site lid 128 164 9.3E-14 T 09-03-2017 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219 LS838_RS01940 26c9cb1061409c90d4b1aa7721d74d2b 217 Pfam PF00406 Adenylate kinase 6 192 1.3E-53 T 09-03-2017 LS838_RS01940 26c9cb1061409c90d4b1aa7721d74d2b 217 Hamap MF_00235 Adenylate kinase [adk]. 2 215 47.851 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 LS838_RS01940 26c9cb1061409c90d4b1aa7721d74d2b 217 PRINTS PR00094 Adenylate kinase signature 179 193 1.1E-28 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 LS838_RS01940 26c9cb1061409c90d4b1aa7721d74d2b 217 PRINTS PR00094 Adenylate kinase signature 5 18 1.1E-28 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 LS838_RS01940 26c9cb1061409c90d4b1aa7721d74d2b 217 PRINTS PR00094 Adenylate kinase signature 82 98 1.1E-28 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 LS838_RS01940 26c9cb1061409c90d4b1aa7721d74d2b 217 PRINTS PR00094 Adenylate kinase signature 162 177 1.1E-28 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 LS838_RS01940 26c9cb1061409c90d4b1aa7721d74d2b 217 PRINTS PR00094 Adenylate kinase signature 33 47 1.1E-28 T 09-03-2017 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 LS838_RS01940 26c9cb1061409c90d4b1aa7721d74d2b 217 ProSitePatterns PS00113 Adenylate kinase signature. 82 93 - T 09-03-2017 LS838_RS01940 26c9cb1061409c90d4b1aa7721d74d2b 217 TIGRFAM TIGR01351 adk: adenylate kinase 3 214 2.6E-78 T 09-03-2017 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219 LS838_RS01940 26c9cb1061409c90d4b1aa7721d74d2b 217 Gene3D G3DSA:3.40.50.300 2 213 6.2E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01940 26c9cb1061409c90d4b1aa7721d74d2b 217 SUPERFAMILY SSF52540 1 215 2.05E-38 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04070 f4d8db787ed9a607e77f6faa2dd034df 614 Gene3D G3DSA:2.40.50.140 6 112 4.0E-37 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS04070 f4d8db787ed9a607e77f6faa2dd034df 614 PRINTS PR01042 Aspartyl-tRNA synthetase signature 213 226 5.1E-24 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS04070 f4d8db787ed9a607e77f6faa2dd034df 614 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 208 5.1E-24 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS04070 f4d8db787ed9a607e77f6faa2dd034df 614 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 5.1E-24 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS04070 f4d8db787ed9a607e77f6faa2dd034df 614 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 5.1E-24 T 09-03-2017 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS04070 f4d8db787ed9a607e77f6faa2dd034df 614 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 6 586 2.3E-229 T 09-03-2017 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 Reactome: R-HSA-379726 LS838_RS04070 f4d8db787ed9a607e77f6faa2dd034df 614 Gene3D G3DSA:3.30.930.10 417 587 2.9E-105 T 09-03-2017 LS838_RS04070 f4d8db787ed9a607e77f6faa2dd034df 614 Gene3D G3DSA:3.30.930.10 137 282 2.9E-105 T 09-03-2017 LS838_RS04070 f4d8db787ed9a607e77f6faa2dd034df 614 Pfam PF00152 tRNA synthetases class II (D, K and N) 123 560 3.6E-101 T 09-03-2017 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS04070 f4d8db787ed9a607e77f6faa2dd034df 614 SUPERFAMILY SSF55681 118 298 1.13E-98 T 09-03-2017 LS838_RS04070 f4d8db787ed9a607e77f6faa2dd034df 614 SUPERFAMILY SSF55681 427 587 1.13E-98 T 09-03-2017 LS838_RS04070 f4d8db787ed9a607e77f6faa2dd034df 614 SUPERFAMILY SSF55261 295 422 1.05E-36 T 09-03-2017 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 LS838_RS04070 f4d8db787ed9a607e77f6faa2dd034df 614 Pfam PF01336 OB-fold nucleic acid binding domain 23 106 6.6E-15 T 09-03-2017 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 LS838_RS04070 f4d8db787ed9a607e77f6faa2dd034df 614 Pfam PF02938 GAD domain 314 408 6.3E-25 T 09-03-2017 IPR029351 GAD domain Reactome: R-HSA-379726 LS838_RS04070 f4d8db787ed9a607e77f6faa2dd034df 614 SUPERFAMILY SSF50249 6 113 3.05E-32 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS04070 f4d8db787ed9a607e77f6faa2dd034df 614 Gene3D G3DSA:3.30.1360.30 283 416 9.0E-40 T 09-03-2017 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 LS838_RS04070 f4d8db787ed9a607e77f6faa2dd034df 614 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 6 566 34.945 T 09-03-2017 LS838_RS06085 2d7dd3c39843efb3145e74f7f8a0342c 476 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 429 1.2E-182 T 09-03-2017 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 LS838_RS06085 2d7dd3c39843efb3145e74f7f8a0342c 476 Gene3D G3DSA:3.40.50.300 99 298 1.1E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06085 2d7dd3c39843efb3145e74f7f8a0342c 476 SUPERFAMILY SSF47446 328 430 3.27E-35 T 09-03-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 LS838_RS06085 2d7dd3c39843efb3145e74f7f8a0342c 476 Gene3D G3DSA:1.20.120.140 3 90 1.4E-36 T 09-03-2017 LS838_RS06085 2d7dd3c39843efb3145e74f7f8a0342c 476 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 452 34.224 T 09-03-2017 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 LS838_RS06085 2d7dd3c39843efb3145e74f7f8a0342c 476 SMART SM00382 100 302 2.8E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS06085 2d7dd3c39843efb3145e74f7f8a0342c 476 SMART SM00962 101 297 1.6E-108 T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LS838_RS06085 2d7dd3c39843efb3145e74f7f8a0342c 476 SMART SM00963 2 87 8.1E-34 T 09-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LS838_RS06085 2d7dd3c39843efb3145e74f7f8a0342c 476 SUPERFAMILY SSF52540 43 355 4.96E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06085 2d7dd3c39843efb3145e74f7f8a0342c 476 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 7.5E-24 T 09-03-2017 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LS838_RS06085 2d7dd3c39843efb3145e74f7f8a0342c 476 Pfam PF02978 Signal peptide binding domain 328 427 3.1E-31 T 09-03-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 LS838_RS06085 2d7dd3c39843efb3145e74f7f8a0342c 476 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 5.5E-75 T 09-03-2017 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 LS838_RS06085 2d7dd3c39843efb3145e74f7f8a0342c 476 Gene3D G3DSA:1.10.260.30 328 431 2.1E-38 T 09-03-2017 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 LS838_RS05895 ea734fa441be106233bd13b76894d53f 120 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 7 95 2.0E-37 T 09-03-2017 IPR000238 Ribosome-binding factor A GO:0006364 LS838_RS05895 ea734fa441be106233bd13b76894d53f 120 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 1 115 19.48 T 09-03-2017 IPR000238 Ribosome-binding factor A GO:0006364 LS838_RS05895 ea734fa441be106233bd13b76894d53f 120 Gene3D G3DSA:3.30.300.20 2 116 1.0E-36 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta LS838_RS05895 ea734fa441be106233bd13b76894d53f 120 Pfam PF02033 Ribosome-binding factor A 4 108 5.0E-28 T 09-03-2017 IPR000238 Ribosome-binding factor A GO:0006364 LS838_RS05895 ea734fa441be106233bd13b76894d53f 120 SUPERFAMILY SSF89919 3 111 1.27E-30 T 09-03-2017 IPR023799 Ribosome-binding factor A domain LS838_RS05895 ea734fa441be106233bd13b76894d53f 120 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 2 113 2.9E-29 T 09-03-2017 IPR000238 Ribosome-binding factor A GO:0006364 LS838_RS05895 ea734fa441be106233bd13b76894d53f 120 ProSitePatterns PS01319 Ribosome-binding factor A signature. 74 95 - T 09-03-2017 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 LS838_RS03990 6ff64fb74cadecc3f7db73c47adaef2e 202 Gene3D G3DSA:1.10.287.860 153 201 7.6E-20 T 09-03-2017 LS838_RS03990 6ff64fb74cadecc3f7db73c47adaef2e 202 SMART SM00954 43 170 3.0E-39 T 09-03-2017 IPR007685 RelA/SpoT GO:0015969 LS838_RS03990 6ff64fb74cadecc3f7db73c47adaef2e 202 Pfam PF04607 Region found in RelA / SpoT proteins 43 167 3.4E-32 T 09-03-2017 IPR007685 RelA/SpoT GO:0015969 LS838_RS03990 6ff64fb74cadecc3f7db73c47adaef2e 202 Gene3D G3DSA:3.30.460.10 8 150 1.8E-33 T 09-03-2017 LS838_RS03990 6ff64fb74cadecc3f7db73c47adaef2e 202 SUPERFAMILY SSF81301 10 200 3.43E-47 T 09-03-2017 LS838_RS02075 90655dbc3c5253e172233f20243f66b1 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 2.3E-11 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LS838_RS02075 90655dbc3c5253e172233f20243f66b1 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 2.3E-11 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LS838_RS02075 90655dbc3c5253e172233f20243f66b1 233 SMART SM00345 9 68 2.0E-25 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LS838_RS02075 90655dbc3c5253e172233f20243f66b1 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 68 7.0E-22 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LS838_RS02075 90655dbc3c5253e172233f20243f66b1 233 Gene3D G3DSA:1.10.10.10 2 66 1.3E-28 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS02075 90655dbc3c5253e172233f20243f66b1 233 SUPERFAMILY SSF64288 56 231 4.08E-46 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LS838_RS02075 90655dbc3c5253e172233f20243f66b1 233 Pfam PF07702 UTRA domain 90 228 5.1E-35 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LS838_RS02075 90655dbc3c5253e172233f20243f66b1 233 SMART SM00866 89 228 1.6E-37 T 09-03-2017 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 LS838_RS02075 90655dbc3c5253e172233f20243f66b1 233 SUPERFAMILY SSF46785 3 78 1.44E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS02075 90655dbc3c5253e172233f20243f66b1 233 Gene3D G3DSA:3.40.1410.10 67 231 5.4E-49 T 09-03-2017 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain LS838_RS03070 4b708fa0788dc751ff0abad9a83677a1 243 SUPERFAMILY SSF75625 3 239 8.89E-94 T 09-03-2017 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LS838_RS03070 4b708fa0788dc751ff0abad9a83677a1 243 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 3.1E-97 T 09-03-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LS838_RS03070 4b708fa0788dc751ff0abad9a83677a1 243 Gene3D G3DSA:1.10.10.200 1 80 2.3E-37 T 09-03-2017 IPR017856 Integrase, N-terminal zinc-binding domain-like LS838_RS03070 4b708fa0788dc751ff0abad9a83677a1 243 Pfam PF01709 Transcriptional regulator 5 237 9.6E-95 T 09-03-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LS838_RS03070 4b708fa0788dc751ff0abad9a83677a1 243 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 240 36.887 T 09-03-2017 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LS838_RS03070 4b708fa0788dc751ff0abad9a83677a1 243 Gene3D G3DSA:3.30.70.980 134 206 8.8E-27 T 09-03-2017 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LS838_RS03070 4b708fa0788dc751ff0abad9a83677a1 243 Gene3D G3DSA:3.30.1270.10 81 133 1.1E-37 T 09-03-2017 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LS838_RS03070 4b708fa0788dc751ff0abad9a83677a1 243 Gene3D G3DSA:3.30.1270.10 213 239 1.1E-37 T 09-03-2017 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 LS838_RS00175 56767dbbb8382a838da74521c637c076 236 Pfam PF06161 Protein of unknown function (DUF975) 106 234 3.5E-19 T 09-03-2017 IPR010380 Protein of unknown function DUF975 LS838_RS03975 b4304774ddbf98d4b1cc1689a42971b2 290 SMART SM00479 125 288 8.9E-33 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LS838_RS03975 b4304774ddbf98d4b1cc1689a42971b2 290 TIGRFAM TIGR01873 cas_CT1978: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI 1 84 6.4E-18 T 09-03-2017 IPR010152 CRISPR-associated protein Cas2 subtype LS838_RS03975 b4304774ddbf98d4b1cc1689a42971b2 290 Pfam PF00929 Exonuclease 127 278 3.9E-24 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LS838_RS03975 b4304774ddbf98d4b1cc1689a42971b2 290 Pfam PF09707 CRISPR-associated protein (Cas_Cas2CT1978) 1 83 9.3E-32 T 09-03-2017 IPR010152 CRISPR-associated protein Cas2 subtype LS838_RS03975 b4304774ddbf98d4b1cc1689a42971b2 290 SUPERFAMILY SSF53098 124 285 3.17E-45 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS03975 b4304774ddbf98d4b1cc1689a42971b2 290 Gene3D G3DSA:3.30.420.10 122 285 4.7E-43 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS03975 b4304774ddbf98d4b1cc1689a42971b2 290 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 122 280 6.3E-24 T 09-03-2017 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS07040 4adc0fc0f3d012e727e942335bdc2372 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 1.3E-5 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LS838_RS07040 4adc0fc0f3d012e727e942335bdc2372 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 1.3E-5 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LS838_RS07040 4adc0fc0f3d012e727e942335bdc2372 333 Pfam PF13377 Periplasmic binding protein-like domain 175 330 2.6E-20 T 09-03-2017 LS838_RS07040 4adc0fc0f3d012e727e942335bdc2372 333 Gene3D G3DSA:3.40.50.2300 180 311 4.3E-24 T 09-03-2017 LS838_RS07040 4adc0fc0f3d012e727e942335bdc2372 333 SUPERFAMILY SSF53822 65 331 1.33E-54 T 09-03-2017 IPR028082 Periplasmic binding protein-like I LS838_RS07040 4adc0fc0f3d012e727e942335bdc2372 333 Gene3D G3DSA:3.40.50.2300 58 179 1.5E-39 T 09-03-2017 LS838_RS07040 4adc0fc0f3d012e727e942335bdc2372 333 Gene3D G3DSA:1.10.260.40 6 57 3.1E-26 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS07040 4adc0fc0f3d012e727e942335bdc2372 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 09-03-2017 LS838_RS07040 4adc0fc0f3d012e727e942335bdc2372 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 2.4E-21 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LS838_RS07040 4adc0fc0f3d012e727e942335bdc2372 333 SMART SM00354 5 75 7.1E-38 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LS838_RS07040 4adc0fc0f3d012e727e942335bdc2372 333 SUPERFAMILY SSF47413 6 63 8.76E-19 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS00565 f316069c7f8e88d231360a9afbee1005 470 Pfam PF01385 Probable transposase 270 351 3.3E-7 T 09-03-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 LS838_RS00565 f316069c7f8e88d231360a9afbee1005 470 Pfam PF07282 Putative transposase DNA-binding domain 374 439 5.5E-18 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS08730 077e42346cfd136d0171a7a0fc8e2d66 141 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 3 133 1.3E-58 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 LS838_RS08730 077e42346cfd136d0171a7a0fc8e2d66 141 Gene3D G3DSA:2.170.150.20 3 140 5.6E-58 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 LS838_RS08730 077e42346cfd136d0171a7a0fc8e2d66 141 SUPERFAMILY SSF51316 3 139 3.09E-56 T 09-03-2017 IPR011057 Mss4-like LS838_RS08730 077e42346cfd136d0171a7a0fc8e2d66 141 Pfam PF01641 SelR domain 7 124 1.3E-46 T 09-03-2017 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 LS838_RS05790 3af146ba3996358ac87443b432a0d1af 425 ProSitePatterns PS00164 Enolase signature. 335 348 - T 09-03-2017 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS05790 3af146ba3996358ac87443b432a0d1af 425 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 415 1.8E-103 T 09-03-2017 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LS838_RS05790 3af146ba3996358ac87443b432a0d1af 425 PIRSF PIRSF001400 2 423 5.3E-177 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LS838_RS05790 3af146ba3996358ac87443b432a0d1af 425 SMART SM01193 6 135 2.0E-88 T 09-03-2017 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LS838_RS05790 3af146ba3996358ac87443b432a0d1af 425 Gene3D G3DSA:3.20.20.120 130 417 7.4E-112 T 09-03-2017 IPR029065 Enolase C-terminal domain-like LS838_RS05790 3af146ba3996358ac87443b432a0d1af 425 Gene3D G3DSA:3.30.390.10 6 126 3.4E-53 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LS838_RS05790 3af146ba3996358ac87443b432a0d1af 425 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 6 415 6.4E-173 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LS838_RS05790 3af146ba3996358ac87443b432a0d1af 425 Pfam PF03952 Enolase, N-terminal domain 6 135 8.5E-57 T 09-03-2017 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LS838_RS05790 3af146ba3996358ac87443b432a0d1af 425 SUPERFAMILY SSF54826 5 137 1.62E-53 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LS838_RS05790 3af146ba3996358ac87443b432a0d1af 425 SMART SM01192 139 423 4.8E-169 T 09-03-2017 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LS838_RS05790 3af146ba3996358ac87443b432a0d1af 425 Hamap MF_00318 Enolase [eno]. 4 412 40.81 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LS838_RS05790 3af146ba3996358ac87443b432a0d1af 425 SUPERFAMILY SSF51604 140 418 3.81E-105 T 09-03-2017 IPR029065 Enolase C-terminal domain-like LS838_RS05790 3af146ba3996358ac87443b432a0d1af 425 PRINTS PR00148 Enolase signature 108 124 1.4E-37 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LS838_RS05790 3af146ba3996358ac87443b432a0d1af 425 PRINTS PR00148 Enolase signature 312 323 1.4E-37 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LS838_RS05790 3af146ba3996358ac87443b432a0d1af 425 PRINTS PR00148 Enolase signature 364 381 1.4E-37 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LS838_RS05790 3af146ba3996358ac87443b432a0d1af 425 PRINTS PR00148 Enolase signature 335 349 1.4E-37 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LS838_RS05790 3af146ba3996358ac87443b432a0d1af 425 PRINTS PR00148 Enolase signature 161 174 1.4E-37 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LS838_RS05790 3af146ba3996358ac87443b432a0d1af 425 PRINTS PR00148 Enolase signature 39 53 1.4E-37 T 09-03-2017 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LS838_RS03330 7902903875ec05ba4b878939e52939e4 334 Gene3D G3DSA:3.30.420.40 7 151 1.3E-44 T 09-03-2017 LS838_RS03330 7902903875ec05ba4b878939e52939e4 334 SUPERFAMILY SSF53067 7 140 2.88E-40 T 09-03-2017 LS838_RS03330 7902903875ec05ba4b878939e52939e4 334 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 6 330 7.1E-143 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LS838_RS03330 7902903875ec05ba4b878939e52939e4 334 Gene3D G3DSA:3.90.640.10 179 252 3.0E-29 T 09-03-2017 LS838_RS03330 7902903875ec05ba4b878939e52939e4 334 SUPERFAMILY SSF53067 142 324 1.61E-46 T 09-03-2017 LS838_RS03330 7902903875ec05ba4b878939e52939e4 334 Pfam PF06723 MreB/Mbl protein 7 329 2.5E-138 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LS838_RS03330 7902903875ec05ba4b878939e52939e4 334 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 294 320 8.7E-58 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LS838_RS03330 7902903875ec05ba4b878939e52939e4 334 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 124 143 8.7E-58 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LS838_RS03330 7902903875ec05ba4b878939e52939e4 334 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 64 87 8.7E-58 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LS838_RS03330 7902903875ec05ba4b878939e52939e4 334 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 179 199 8.7E-58 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LS838_RS03330 7902903875ec05ba4b878939e52939e4 334 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 44 62 8.7E-58 T 09-03-2017 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 LS838_RS03330 7902903875ec05ba4b878939e52939e4 334 Gene3D G3DSA:3.30.420.40 257 311 2.1E-30 T 09-03-2017 LS838_RS03330 7902903875ec05ba4b878939e52939e4 334 Gene3D G3DSA:3.30.420.40 152 178 2.1E-30 T 09-03-2017 LS838_RS00475 a7c09c9236f49c8cfc0dd593d09f85ed 739 SUPERFAMILY SSF51998 5 723 2.23E-251 T 09-03-2017 LS838_RS00475 a7c09c9236f49c8cfc0dd593d09f85ed 739 Gene3D G3DSA:3.90.1390.10 575 613 3.1E-36 T 09-03-2017 LS838_RS00475 a7c09c9236f49c8cfc0dd593d09f85ed 739 Gene3D G3DSA:3.90.1390.10 681 739 3.1E-36 T 09-03-2017 LS838_RS00475 a7c09c9236f49c8cfc0dd593d09f85ed 739 Gene3D G3DSA:3.20.70.20 639 680 1.8E-121 T 09-03-2017 LS838_RS00475 a7c09c9236f49c8cfc0dd593d09f85ed 739 Gene3D G3DSA:3.20.70.20 5 165 1.8E-121 T 09-03-2017 LS838_RS00475 a7c09c9236f49c8cfc0dd593d09f85ed 739 Gene3D G3DSA:3.20.70.20 253 574 1.8E-121 T 09-03-2017 LS838_RS00475 a7c09c9236f49c8cfc0dd593d09f85ed 739 Pfam PF02867 Ribonucleotide reductase, barrel domain 252 482 1.2E-8 T 09-03-2017 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 LS838_RS00475 a7c09c9236f49c8cfc0dd593d09f85ed 739 TIGRFAM TIGR02505 RTPR: ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent 16 739 0.0 T 09-03-2017 IPR013345 Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0006260|GO:0008998|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 LS838_RS07425 6afc9a9739c1dfcdbeb7362f3a742fb1 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 49 4.1E-15 T 09-03-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS07425 6afc9a9739c1dfcdbeb7362f3a742fb1 49 SUPERFAMILY SSF57829 4 49 1.65E-13 T 09-03-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 LS838_RS07425 6afc9a9739c1dfcdbeb7362f3a742fb1 49 Pfam PF00471 Ribosomal protein L33 5 49 4.9E-17 T 09-03-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS07425 6afc9a9739c1dfcdbeb7362f3a742fb1 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 49 14.237 T 09-03-2017 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS09185 6aa0e1dae08f74dcfbb4829d372a055a 165 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 79 91 - T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LS838_RS09185 6aa0e1dae08f74dcfbb4829d372a055a 165 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 16 138 7.4E-43 T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LS838_RS09185 6aa0e1dae08f74dcfbb4829d372a055a 165 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 17 137 1.8E-36 T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LS838_RS09185 6aa0e1dae08f74dcfbb4829d372a055a 165 Gene3D G3DSA:2.70.70.10 14 159 1.0E-47 T 09-03-2017 LS838_RS09185 6aa0e1dae08f74dcfbb4829d372a055a 165 SUPERFAMILY SSF51261 9 142 1.44E-45 T 09-03-2017 IPR011055 Duplicated hybrid motif LS838_RS09665 3096162df55034222e9141c720ce927c 250 Gene3D G3DSA:3.40.50.2300 1 132 6.2E-18 T 09-03-2017 LS838_RS09665 3096162df55034222e9141c720ce927c 250 SMART SM00448 2 127 1.0E-11 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LS838_RS09665 3096162df55034222e9141c720ce927c 250 Gene3D G3DSA:2.40.50.40 146 214 3.6E-5 T 09-03-2017 LS838_RS09665 3096162df55034222e9141c720ce927c 250 Pfam PF00072 Response regulator receiver domain 4 127 3.1E-13 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LS838_RS09665 3096162df55034222e9141c720ce927c 250 SMART SM00850 155 249 1.2E-9 T 09-03-2017 IPR007492 LytTR DNA-binding domain GO:0003677 LS838_RS09665 3096162df55034222e9141c720ce927c 250 SUPERFAMILY SSF52172 2 139 2.42E-15 T 09-03-2017 IPR011006 CheY-like superfamily LS838_RS09665 3096162df55034222e9141c720ce927c 250 Pfam PF04397 LytTr DNA-binding domain 157 247 2.8E-14 T 09-03-2017 IPR007492 LytTR DNA-binding domain GO:0003677 LS838_RS08870 e9ceed879b8b7bac138ef2d763c904c3 315 Gene3D G3DSA:3.90.550.10 89 163 2.9E-5 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS08870 e9ceed879b8b7bac138ef2d763c904c3 315 SUPERFAMILY SSF53448 58 195 1.77E-13 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS08870 e9ceed879b8b7bac138ef2d763c904c3 315 Pfam PF13704 Glycosyl transferase family 2 67 159 5.7E-15 T 09-03-2017 LS838_RS01265 fa4c64ec599afe6c1a11681374250fab 216 SUPERFAMILY SSF109604 4 215 4.57E-56 T 09-03-2017 LS838_RS01265 fa4c64ec599afe6c1a11681374250fab 216 Gene3D G3DSA:1.10.3210.10 185 213 8.4E-33 T 09-03-2017 IPR006674 HD domain LS838_RS01265 fa4c64ec599afe6c1a11681374250fab 216 Gene3D G3DSA:1.10.3210.10 3 142 8.4E-33 T 09-03-2017 IPR006674 HD domain LS838_RS01265 fa4c64ec599afe6c1a11681374250fab 216 SMART SM00471 18 138 6.8E-6 T 09-03-2017 IPR003607 HD/PDEase domain LS838_RS02750 3a528687ca7de9e4973890da293eee21 369 PRINTS PR00142 RecA protein signature 128 157 2.4E-84 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LS838_RS02750 3a528687ca7de9e4973890da293eee21 369 PRINTS PR00142 RecA protein signature 94 123 2.4E-84 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LS838_RS02750 3a528687ca7de9e4973890da293eee21 369 PRINTS PR00142 RecA protein signature 166 195 2.4E-84 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LS838_RS02750 3a528687ca7de9e4973890da293eee21 369 PRINTS PR00142 RecA protein signature 211 239 2.4E-84 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LS838_RS02750 3a528687ca7de9e4973890da293eee21 369 PRINTS PR00142 RecA protein signature 244 273 2.4E-84 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LS838_RS02750 3a528687ca7de9e4973890da293eee21 369 PRINTS PR00142 RecA protein signature 298 315 2.4E-84 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LS838_RS02750 3a528687ca7de9e4973890da293eee21 369 Gene3D G3DSA:3.30.250.10 269 327 2.5E-26 T 09-03-2017 IPR023400 DNA recombination and repair protein RecA, C-terminal LS838_RS02750 3a528687ca7de9e4973890da293eee21 369 Pfam PF00154 recA bacterial DNA recombination protein 9 269 2.4E-138 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LS838_RS02750 3a528687ca7de9e4973890da293eee21 369 SUPERFAMILY SSF52540 6 268 6.37E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02750 3a528687ca7de9e4973890da293eee21 369 Hamap MF_00268 Protein RecA [recA]. 6 330 51.58 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LS838_RS02750 3a528687ca7de9e4973890da293eee21 369 Gene3D G3DSA:3.40.50.300 29 268 1.4E-79 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02750 3a528687ca7de9e4973890da293eee21 369 SMART SM00382 58 229 3.4E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS02750 3a528687ca7de9e4973890da293eee21 369 SUPERFAMILY SSF54752 270 327 1.31E-20 T 09-03-2017 IPR023400 DNA recombination and repair protein RecA, C-terminal LS838_RS02750 3a528687ca7de9e4973890da293eee21 369 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 5 324 2.5E-165 T 09-03-2017 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 LS838_RS02750 3a528687ca7de9e4973890da293eee21 369 ProSitePatterns PS00321 recA signature. 214 222 - T 09-03-2017 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 LS838_RS09480 a77d8c2d8368feb3e03b5f992e4467a2 204 Pfam PF00677 Lumazine binding domain 100 184 3.0E-22 T 09-03-2017 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LS838_RS09480 a77d8c2d8368feb3e03b5f992e4467a2 204 Pfam PF00677 Lumazine binding domain 3 86 1.2E-20 T 09-03-2017 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LS838_RS09480 a77d8c2d8368feb3e03b5f992e4467a2 204 PIRSF PIRSF000498 1 204 5.1E-67 T 09-03-2017 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LS838_RS09480 a77d8c2d8368feb3e03b5f992e4467a2 204 Gene3D G3DSA:2.40.30.20 6 104 6.1E-31 T 09-03-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 LS838_RS09480 a77d8c2d8368feb3e03b5f992e4467a2 204 Gene3D G3DSA:2.40.30.20 105 201 3.2E-30 T 09-03-2017 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 LS838_RS09480 a77d8c2d8368feb3e03b5f992e4467a2 204 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 2.9E-65 T 09-03-2017 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 LS838_RS09480 a77d8c2d8368feb3e03b5f992e4467a2 204 SUPERFAMILY SSF63380 1 88 1.7E-24 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LS838_RS09480 a77d8c2d8368feb3e03b5f992e4467a2 204 SUPERFAMILY SSF63380 94 201 8.5E-31 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LS838_RS06390 f1fff88a1c69e9ea0d835c2d7476c7cb 240 Pfam PF01259 SAICAR synthetase 4 230 1.3E-58 T 09-03-2017 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LS838_RS06390 f1fff88a1c69e9ea0d835c2d7476c7cb 240 SUPERFAMILY SSF56104 3 233 2.16E-76 T 09-03-2017 LS838_RS06390 f1fff88a1c69e9ea0d835c2d7476c7cb 240 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 2 234 29.889 T 09-03-2017 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 LS838_RS06390 f1fff88a1c69e9ea0d835c2d7476c7cb 240 Gene3D G3DSA:3.30.200.20 4 91 1.7E-35 T 09-03-2017 LS838_RS06390 f1fff88a1c69e9ea0d835c2d7476c7cb 240 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 5 218 6.0E-67 T 09-03-2017 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 LS838_RS06390 f1fff88a1c69e9ea0d835c2d7476c7cb 240 Gene3D G3DSA:3.30.470.20 92 219 3.5E-48 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LS838_RS01915 dfaa5a3ce186b67b71bc46943dfc67ed 119 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 119 29.282 T 09-03-2017 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01915 dfaa5a3ce186b67b71bc46943dfc67ed 119 Gene3D G3DSA:3.30.420.100 24 119 3.8E-39 T 09-03-2017 LS838_RS01915 dfaa5a3ce186b67b71bc46943dfc67ed 119 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 119 1.0E-42 T 09-03-2017 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01915 dfaa5a3ce186b67b71bc46943dfc67ed 119 SUPERFAMILY SSF53137 7 117 3.49E-52 T 09-03-2017 LS838_RS01915 dfaa5a3ce186b67b71bc46943dfc67ed 119 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 119 3.4E-48 T 09-03-2017 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01375 f0c60e8c30bac355719c0dc3664adbb0 430 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 420 2.9E-135 T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 LS838_RS01375 f0c60e8c30bac355719c0dc3664adbb0 430 TIGRFAM TIGR03173 pbuX: xanthine permease 15 422 8.8E-163 T 09-03-2017 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 LS838_RS01375 f0c60e8c30bac355719c0dc3664adbb0 430 Pfam PF00860 Permease family 12 390 3.9E-112 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LS838_RS01375 f0c60e8c30bac355719c0dc3664adbb0 430 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 337 357 - T 09-03-2017 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 LS838_RS04740 3a2acf984f58cedb3eb2d60d38ff7a2b 402 SUPERFAMILY SSF51338 363 386 1.16E-9 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LS838_RS04740 3a2acf984f58cedb3eb2d60d38ff7a2b 402 SUPERFAMILY SSF51338 31 59 1.16E-9 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LS838_RS04740 3a2acf984f58cedb3eb2d60d38ff7a2b 402 Gene3D G3DSA:2.30.40.10 2 60 7.5E-22 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LS838_RS04740 3a2acf984f58cedb3eb2d60d38ff7a2b 402 Gene3D G3DSA:2.30.40.10 363 399 7.5E-22 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LS838_RS04740 3a2acf984f58cedb3eb2d60d38ff7a2b 402 Pfam PF01979 Amidohydrolase family 55 388 9.6E-37 T 09-03-2017 IPR006680 Amidohydrolase-related GO:0016787 LS838_RS04740 3a2acf984f58cedb3eb2d60d38ff7a2b 402 SUPERFAMILY SSF51556 59 363 1.48E-82 T 09-03-2017 IPR032466 Metal-dependent hydrolase LS838_RS04740 3a2acf984f58cedb3eb2d60d38ff7a2b 402 Gene3D G3DSA:3.20.20.140 61 358 8.0E-79 T 09-03-2017 LS838_RS01925 d176776e215478d168688f7530cd58d6 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 7.9E-20 T 09-03-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 LS838_RS01925 d176776e215478d168688f7530cd58d6 61 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 3.3E-18 T 09-03-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain LS838_RS01925 d176776e215478d168688f7530cd58d6 61 SUPERFAMILY SSF55129 2 60 7.33E-18 T 09-03-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain LS838_RS01925 d176776e215478d168688f7530cd58d6 61 PIRSF PIRSF002211 1 60 5.7E-23 T 09-03-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 LS838_RS01925 d176776e215478d168688f7530cd58d6 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 16.098 T 09-03-2017 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 LS838_RS01925 d176776e215478d168688f7530cd58d6 61 Gene3D G3DSA:3.30.1390.20 1 59 3.8E-22 T 09-03-2017 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain LS838_RS06895 85007507cee0992fb1b5d51045949b1e 511 Gene3D G3DSA:2.40.440.10 356 508 6.8E-14 T 09-03-2017 LS838_RS06895 85007507cee0992fb1b5d51045949b1e 511 Pfam PF08428 Rib/alpha-like repeat 61 124 1.6E-13 T 09-03-2017 IPR012706 Rib/alpha/Esp surface antigen LS838_RS06895 85007507cee0992fb1b5d51045949b1e 511 Pfam PF08428 Rib/alpha-like repeat 139 202 2.3E-12 T 09-03-2017 IPR012706 Rib/alpha/Esp surface antigen LS838_RS06895 85007507cee0992fb1b5d51045949b1e 511 TIGRFAM TIGR02331 rib_alpha: Rib/alpha/Esp surface antigen repeat 61 126 9.1E-13 T 09-03-2017 IPR012706 Rib/alpha/Esp surface antigen LS838_RS06895 85007507cee0992fb1b5d51045949b1e 511 TIGRFAM TIGR02331 rib_alpha: Rib/alpha/Esp surface antigen repeat 139 206 2.7E-10 T 09-03-2017 IPR012706 Rib/alpha/Esp surface antigen LS838_RS06895 85007507cee0992fb1b5d51045949b1e 511 SUPERFAMILY SSF141523 358 508 3.27E-15 T 09-03-2017 LS838_RS06895 85007507cee0992fb1b5d51045949b1e 511 Pfam PF03734 L,D-transpeptidase catalytic domain 362 508 1.3E-11 T 09-03-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 LS838_RS08445 6d44256ab1c6f2c5bc0c29f4b7326ee0 304 Hamap MF_00215 Pantothenate kinase [coaA]. 1 304 135.695 T 09-03-2017 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 LS838_RS08445 6d44256ab1c6f2c5bc0c29f4b7326ee0 304 Gene3D G3DSA:3.40.50.300 2 302 2.8E-92 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08445 6d44256ab1c6f2c5bc0c29f4b7326ee0 304 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 4 302 2.5E-95 T 09-03-2017 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 LS838_RS08445 6d44256ab1c6f2c5bc0c29f4b7326ee0 304 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 230 1.0E-8 T 09-03-2017 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 LS838_RS08445 6d44256ab1c6f2c5bc0c29f4b7326ee0 304 PIRSF PIRSF000545 1 304 1.7E-119 T 09-03-2017 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 LS838_RS08445 6d44256ab1c6f2c5bc0c29f4b7326ee0 304 SUPERFAMILY SSF52540 3 302 1.87E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00590 93ffcd8f1f3360fd4378078de89b57bf 393 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LS838_RS00590 93ffcd8f1f3360fd4378078de89b57bf 393 Pfam PF07690 Major Facilitator Superfamily 16 231 1.5E-15 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LS838_RS00590 93ffcd8f1f3360fd4378078de89b57bf 393 Gene3D G3DSA:1.20.1250.20 15 197 4.7E-19 T 09-03-2017 LS838_RS00590 93ffcd8f1f3360fd4378078de89b57bf 393 Gene3D G3DSA:1.20.1250.20 207 389 2.6E-8 T 09-03-2017 LS838_RS00590 93ffcd8f1f3360fd4378078de89b57bf 393 SUPERFAMILY SSF103473 14 387 7.46E-35 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS04295 0fefcdd46e0cd7853ce2e69685197c14 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 464 2.5E-65 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain LS838_RS04295 0fefcdd46e0cd7853ce2e69685197c14 539 Gene3D G3DSA:3.10.105.10 291 511 6.1E-47 T 09-03-2017 LS838_RS04295 0fefcdd46e0cd7853ce2e69685197c14 539 SUPERFAMILY SSF53850 34 537 3.46E-112 T 09-03-2017 LS838_RS04295 0fefcdd46e0cd7853ce2e69685197c14 539 PIRSF PIRSF002741 4 538 4.7E-85 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LS838_RS04295 0fefcdd46e0cd7853ce2e69685197c14 539 Gene3D G3DSA:3.90.76.10 45 218 3.0E-44 T 09-03-2017 LS838_RS09565 d458951d88d52460637d8d3dbbc8de61 428 Pfam PF04918 DltD central region 97 257 2.2E-46 T 09-03-2017 IPR007002 DltD, central domain LS838_RS09565 d458951d88d52460637d8d3dbbc8de61 428 PIRSF PIRSF021438 3 389 1.4E-131 T 09-03-2017 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD LS838_RS09565 d458951d88d52460637d8d3dbbc8de61 428 Pfam PF04914 DltD C-terminal region 259 387 1.2E-50 T 09-03-2017 IPR006998 DltD, C-terminal LS838_RS09565 d458951d88d52460637d8d3dbbc8de61 428 Pfam PF04915 DltD N-terminal region 39 96 2.0E-26 T 09-03-2017 IPR006999 DltD, N-terminal LS838_RS09565 d458951d88d52460637d8d3dbbc8de61 428 TIGRFAM TIGR04092 LTA_DltD: D-alanyl-lipoteichoic acid biosynthesis protein DltD 11 386 8.6E-133 T 09-03-2017 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD LS838_RS01550 f23928eab34c68c27a91fa376cb76b1a 341 Gene3D G3DSA:1.10.240.10 217 324 4.2E-41 T 09-03-2017 LS838_RS01550 f23928eab34c68c27a91fa376cb76b1a 341 Pfam PF00579 tRNA synthetases class I (W and Y) 5 289 3.6E-60 T 09-03-2017 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS01550 f23928eab34c68c27a91fa376cb76b1a 341 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS01550 f23928eab34c68c27a91fa376cb76b1a 341 Gene3D G3DSA:3.40.50.620 3 216 7.1E-78 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS01550 f23928eab34c68c27a91fa376cb76b1a 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 1.3E-26 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 LS838_RS01550 f23928eab34c68c27a91fa376cb76b1a 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 201 211 1.3E-26 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 LS838_RS01550 f23928eab34c68c27a91fa376cb76b1a 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 147 168 1.3E-26 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 LS838_RS01550 f23928eab34c68c27a91fa376cb76b1a 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 69 88 1.3E-26 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 LS838_RS01550 f23928eab34c68c27a91fa376cb76b1a 341 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 1.7E-81 T 09-03-2017 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 LS838_RS01550 f23928eab34c68c27a91fa376cb76b1a 341 SUPERFAMILY SSF52374 5 334 3.22E-85 T 09-03-2017 LS838_RS06005 a74f9db337eb5b0b78e4088a877353d3 586 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS06005 a74f9db337eb5b0b78e4088a877353d3 586 SMART SM00382 364 544 8.7E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS06005 a74f9db337eb5b0b78e4088a877353d3 586 Gene3D G3DSA:3.40.50.300 342 569 9.5E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06005 a74f9db337eb5b0b78e4088a877353d3 586 SUPERFAMILY SSF90123 7 318 1.06E-68 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS06005 a74f9db337eb5b0b78e4088a877353d3 586 Pfam PF00664 ABC transporter transmembrane region 20 291 3.7E-40 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS06005 a74f9db337eb5b0b78e4088a877353d3 586 Gene3D G3DSA:1.20.1560.10 7 318 2.4E-68 T 09-03-2017 LS838_RS06005 a74f9db337eb5b0b78e4088a877353d3 586 Pfam PF00005 ABC transporter 357 503 7.9E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS06005 a74f9db337eb5b0b78e4088a877353d3 586 SUPERFAMILY SSF52540 331 574 4.69E-82 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03790 c52a0115df8f08c541b7852061a1f65b 319 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 318 45.352 T 09-03-2017 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 LS838_RS03790 c52a0115df8f08c541b7852061a1f65b 319 SUPERFAMILY SSF53784 1 315 5.49E-113 T 09-03-2017 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS03790 c52a0115df8f08c541b7852061a1f65b 319 Pfam PF00365 Phosphofructokinase 3 275 1.3E-105 T 09-03-2017 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS03790 c52a0115df8f08c541b7852061a1f65b 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 1.8E-80 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS03790 c52a0115df8f08c541b7852061a1f65b 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 1.8E-80 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS03790 c52a0115df8f08c541b7852061a1f65b 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 1.8E-80 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS03790 c52a0115df8f08c541b7852061a1f65b 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 1.8E-80 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS03790 c52a0115df8f08c541b7852061a1f65b 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 239 261 1.8E-80 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS03790 c52a0115df8f08c541b7852061a1f65b 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 1.8E-80 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS03790 c52a0115df8f08c541b7852061a1f65b 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 1.8E-80 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS03790 c52a0115df8f08c541b7852061a1f65b 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 1.8E-80 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS03790 c52a0115df8f08c541b7852061a1f65b 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 1.8E-80 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS03790 c52a0115df8f08c541b7852061a1f65b 319 Gene3D G3DSA:3.40.50.450 1 212 1.5E-71 T 09-03-2017 LS838_RS03790 c52a0115df8f08c541b7852061a1f65b 319 ProSitePatterns PS00433 Phosphofructokinase signature. 243 261 - T 09-03-2017 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS03790 c52a0115df8f08c541b7852061a1f65b 319 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 298 1.9E-120 T 09-03-2017 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 LS838_RS03790 c52a0115df8f08c541b7852061a1f65b 319 PIRSF PIRSF000532 1 318 9.0E-116 T 09-03-2017 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 LS838_RS01005 1b9a0d9cbdc2a1621d57ab2373899375 452 SUPERFAMILY SSF161098 201 441 1.28E-45 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS01005 1b9a0d9cbdc2a1621d57ab2373899375 452 Gene3D G3DSA:1.10.3720.10 212 446 3.0E-50 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS01005 1b9a0d9cbdc2a1621d57ab2373899375 452 SUPERFAMILY SSF160964 151 192 4.71E-5 T 09-03-2017 LS838_RS01005 1b9a0d9cbdc2a1621d57ab2373899375 452 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 235 445 3.0E-21 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS01005 1b9a0d9cbdc2a1621d57ab2373899375 452 Gene3D G3DSA:1.20.58.370 152 186 1.8E-4 T 09-03-2017 LS838_RS05195 990f9593fa459586529ce7b842e384bc 384 Pfam PF01546 Peptidase family M20/M25/M40 73 378 3.6E-27 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LS838_RS05195 990f9593fa459586529ce7b842e384bc 384 Gene3D G3DSA:3.40.630.10 6 177 9.9E-76 T 09-03-2017 LS838_RS05195 990f9593fa459586529ce7b842e384bc 384 Gene3D G3DSA:3.40.630.10 298 379 9.9E-76 T 09-03-2017 LS838_RS05195 990f9593fa459586529ce7b842e384bc 384 Hamap MF_01692 N-acetyldiaminopimelate deacetylase. 6 380 62.085 T 09-03-2017 IPR023905 Acetyldiaminopimelate deacetylase GO:0009089|GO:0050118 KEGG: 00300+3.5.1.47|MetaCyc: PWY-2941 LS838_RS05195 990f9593fa459586529ce7b842e384bc 384 Gene3D G3DSA:3.30.70.360 180 297 1.8E-33 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain LS838_RS05195 990f9593fa459586529ce7b842e384bc 384 PIRSF PIRSF005962 3 383 4.2E-99 T 09-03-2017 IPR017439 Amidohydrolase GO:0016787 LS838_RS05195 990f9593fa459586529ce7b842e384bc 384 Pfam PF07687 Peptidase dimerisation domain 181 274 3.6E-6 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain LS838_RS05195 990f9593fa459586529ce7b842e384bc 384 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 10 365 2.6E-89 T 09-03-2017 IPR017439 Amidohydrolase GO:0016787 LS838_RS05195 990f9593fa459586529ce7b842e384bc 384 SUPERFAMILY SSF53187 298 378 4.07E-65 T 09-03-2017 LS838_RS05195 990f9593fa459586529ce7b842e384bc 384 SUPERFAMILY SSF53187 7 196 4.07E-65 T 09-03-2017 LS838_RS05195 990f9593fa459586529ce7b842e384bc 384 SUPERFAMILY SSF55031 183 290 6.02E-26 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain LS838_RS01395 d5174abc1e463b6c2ae1a1e687604a68 536 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 355 368 - T 09-03-2017 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 LS838_RS01395 d5174abc1e463b6c2ae1a1e687604a68 536 SUPERFAMILY SSF90123 9 300 4.97E-34 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS01395 d5174abc1e463b6c2ae1a1e687604a68 536 SMART SM00382 351 535 2.0E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS01395 d5174abc1e463b6c2ae1a1e687604a68 536 Gene3D G3DSA:1.20.1560.10 8 299 1.8E-22 T 09-03-2017 LS838_RS01395 d5174abc1e463b6c2ae1a1e687604a68 536 Pfam PF00005 ABC transporter 346 488 2.0E-26 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS01395 d5174abc1e463b6c2ae1a1e687604a68 536 Pfam PF00664 ABC transporter transmembrane region 106 282 1.9E-11 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS01395 d5174abc1e463b6c2ae1a1e687604a68 536 Gene3D G3DSA:3.40.50.300 328 533 6.0E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01395 d5174abc1e463b6c2ae1a1e687604a68 536 SUPERFAMILY SSF52540 327 533 7.53E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01670 7e4ad44c6f97afb32cc62ac123f60c64 185 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 185 1.1E-56 T 09-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LS838_RS01670 7e4ad44c6f97afb32cc62ac123f60c64 185 Gene3D G3DSA:3.40.50.1470 1 185 3.1E-68 T 09-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LS838_RS01670 7e4ad44c6f97afb32cc62ac123f60c64 185 SUPERFAMILY SSF53178 1 185 8.76E-62 T 09-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LS838_RS01670 7e4ad44c6f97afb32cc62ac123f60c64 185 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 09-03-2017 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 LS838_RS01670 7e4ad44c6f97afb32cc62ac123f60c64 185 Pfam PF01195 Peptidyl-tRNA hydrolase 3 183 5.1E-56 T 09-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LS838_RS01670 7e4ad44c6f97afb32cc62ac123f60c64 185 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 177 33.863 T 09-03-2017 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 LS838_RS08780 1794bffde0bdf669c16d8c2fa264500e 193 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 10 189 5.0E-69 T 09-03-2017 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 LS838_RS08780 1794bffde0bdf669c16d8c2fa264500e 193 Pfam PF02734 DAK2 domain 32 189 4.0E-48 T 09-03-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 LS838_RS08780 1794bffde0bdf669c16d8c2fa264500e 193 SUPERFAMILY SSF101473 4 191 3.4E-57 T 09-03-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 LS838_RS08780 1794bffde0bdf669c16d8c2fa264500e 193 SMART SM01120 32 190 2.9E-68 T 09-03-2017 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 LS838_RS03535 32510ead0d50f0f4c5e79f21878c47ce 329 SUPERFAMILY SSF52540 6 206 3.98E-8 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03535 32510ead0d50f0f4c5e79f21878c47ce 329 SUPERFAMILY SSF48019 212 315 1.45E-16 T 09-03-2017 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 LS838_RS03535 32510ead0d50f0f4c5e79f21878c47ce 329 Gene3D G3DSA:3.40.50.300 16 138 1.1E-8 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03535 32510ead0d50f0f4c5e79f21878c47ce 329 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 326 1.3E-39 T 09-03-2017 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 LS838_RS03535 32510ead0d50f0f4c5e79f21878c47ce 329 Pfam PF06144 DNA polymerase III, delta subunit 38 189 1.7E-14 T 09-03-2017 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 LS838_RS03535 32510ead0d50f0f4c5e79f21878c47ce 329 Gene3D G3DSA:1.10.8.60 151 230 6.6E-6 T 09-03-2017 LS838_RS08750 d36ec8f56b209cd1ab8ed583b8b34ef6 294 Pfam PF00483 Nucleotidyl transferase 2 239 2.7E-71 T 09-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 LS838_RS08750 d36ec8f56b209cd1ab8ed583b8b34ef6 294 Gene3D G3DSA:3.90.550.10 1 266 4.5E-64 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS08750 d36ec8f56b209cd1ab8ed583b8b34ef6 294 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 288 1.4E-141 T 09-03-2017 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LS838_RS08750 d36ec8f56b209cd1ab8ed583b8b34ef6 294 SUPERFAMILY SSF53448 1 287 4.33E-86 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS04530 02373d81735dc31b86d657f53fef088c 642 Gene3D G3DSA:3.40.50.1820 88 123 5.5E-69 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS04530 02373d81735dc31b86d657f53fef088c 642 Gene3D G3DSA:3.40.50.1820 347 641 5.5E-69 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS04530 02373d81735dc31b86d657f53fef088c 642 SUPERFAMILY SSF53474 389 641 5.84E-60 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS04530 02373d81735dc31b86d657f53fef088c 642 SUPERFAMILY SSF69322 162 371 1.7E-10 T 09-03-2017 LS838_RS04530 02373d81735dc31b86d657f53fef088c 642 SUPERFAMILY SSF69322 47 126 1.7E-10 T 09-03-2017 LS838_RS04530 02373d81735dc31b86d657f53fef088c 642 Pfam PF00326 Prolyl oligopeptidase family 432 641 5.5E-48 T 09-03-2017 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 LS838_RS02710 732915685a2d2d1ea65a2d981119e373 185 SUPERFAMILY SSF75217 4 157 1.83E-38 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases LS838_RS02710 732915685a2d2d1ea65a2d981119e373 185 Gene3D G3DSA:3.40.1280.10 3 167 1.4E-59 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LS838_RS02710 732915685a2d2d1ea65a2d981119e373 185 Pfam PF00588 SpoU rRNA Methylase family 4 145 4.2E-29 T 09-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LS838_RS02710 732915685a2d2d1ea65a2d981119e373 185 PIRSF PIRSF029256 2 158 3.1E-60 T 09-03-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LS838_RS02710 732915685a2d2d1ea65a2d981119e373 185 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 3 155 33.002 T 09-03-2017 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 SUPERFAMILY SSF52113 590 659 1.8E-17 T 09-03-2017 IPR001357 BRCT domain LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 SUPERFAMILY SSF47781 401 581 1.71E-56 T 09-03-2017 IPR010994 RuvA domain 2-like LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 7 315 3.7E-116 T 09-03-2017 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 Pfam PF14520 Helix-hairpin-helix domain 442 495 0.003 T 09-03-2017 LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 Gene3D G3DSA:2.40.50.140 317 388 4.2E-29 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 117 146 - T 09-03-2017 IPR018239 NAD-dependent DNA ligase, active site LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 Hamap MF_01588 DNA ligase [ligA]. 6 664 49.612 T 09-03-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 318 395 5.8E-31 T 09-03-2017 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 SMART SM00278 476 495 120.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 SMART SM00278 540 559 190.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 SMART SM00278 442 461 23.0 T 09-03-2017 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 SMART SM00292 590 667 3.9E-10 T 09-03-2017 IPR001357 BRCT domain LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 Gene3D G3DSA:1.10.150.20 431 499 4.3E-28 T 09-03-2017 LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 PIRSF PIRSF001604 1 669 8.3E-239 T 09-03-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 Gene3D G3DSA:1.10.150.20 500 580 1.7E-23 T 09-03-2017 LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 Gene3D G3DSA:3.40.50.10190 589 666 1.0E-22 T 09-03-2017 IPR001357 BRCT domain LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 15 659 9.0E-242 T 09-03-2017 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 SUPERFAMILY SSF50249 315 398 7.88E-26 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 404 430 9.0E-9 T 09-03-2017 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 SMART SM00532 7 444 3.5E-242 T 09-03-2017 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 Gene3D G3DSA:3.30.470.30 121 249 2.3E-47 T 09-03-2017 LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 SUPERFAMILY SSF56091 5 313 3.08E-113 T 09-03-2017 LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 Gene3D G3DSA:1.10.287.610 5 70 4.9E-24 T 09-03-2017 LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 328 343 - T 09-03-2017 IPR033136 NAD-dependent DNA ligase, conserved site LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 591 657 2.8E-10 T 09-03-2017 IPR001357 BRCT domain LS838_RS02155 631d59e75973d807e2ace8cfdccd7c87 671 Pfam PF12826 Helix-hairpin-helix motif 507 568 1.3E-18 T 09-03-2017 LS838_RS02935 3e7ee496edca681fde7d84ddc70af14f 161 SUPERFAMILY SSF52540 23 117 6.13E-18 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02935 3e7ee496edca681fde7d84ddc70af14f 161 Gene3D G3DSA:3.40.50.300 2 152 4.9E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02935 3e7ee496edca681fde7d84ddc70af14f 161 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 7 123 5.1E-36 T 09-03-2017 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 LS838_RS02935 3e7ee496edca681fde7d84ddc70af14f 161 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 129 6.1E-39 T 09-03-2017 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 LS838_RS02705 4d3b84a1a456e234cd94d06a49661acd 393 Pfam PF01594 Domain of unknown function DUF20 30 363 5.8E-75 T 09-03-2017 IPR002549 Transmembrane protein TqsA-like LS838_RS06080 240d21bfd904fd79e6ba3c9798a71d49 90 Gene3D G3DSA:3.30.1320.10 3 83 7.8E-36 T 09-03-2017 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06080 240d21bfd904fd79e6ba3c9798a71d49 90 Pfam PF00886 Ribosomal protein S16 9 67 1.1E-26 T 09-03-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06080 240d21bfd904fd79e6ba3c9798a71d49 90 SUPERFAMILY SSF54565 3 85 2.09E-34 T 09-03-2017 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06080 240d21bfd904fd79e6ba3c9798a71d49 90 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 79 2.9E-35 T 09-03-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06080 240d21bfd904fd79e6ba3c9798a71d49 90 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 26.083 T 09-03-2017 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS07660 1fe86f6a85383d702e9ec73d1dcac11a 261 SUPERFAMILY SSF141868 13 132 7.72E-37 T 09-03-2017 IPR001633 EAL domain LS838_RS07660 1fe86f6a85383d702e9ec73d1dcac11a 261 SMART SM00052 1 125 1.2E-6 T 09-03-2017 IPR001633 EAL domain LS838_RS07660 1fe86f6a85383d702e9ec73d1dcac11a 261 Pfam PF00563 EAL domain 16 120 3.0E-30 T 09-03-2017 IPR001633 EAL domain LS838_RS07660 1fe86f6a85383d702e9ec73d1dcac11a 261 Gene3D G3DSA:3.20.20.450 12 132 7.2E-38 T 09-03-2017 IPR001633 EAL domain LS838_RS05035 6e6febfaa35291d165f3a4b2b4c65532 233 Gene3D G3DSA:3.60.160.10 1 226 1.8E-71 T 09-03-2017 IPR002838 Mitochondrial biogenesis protein AIM24 LS838_RS05035 6e6febfaa35291d165f3a4b2b4c65532 233 SUPERFAMILY SSF51219 1 226 1.99E-59 T 09-03-2017 IPR016031 Tryptophan RNA-binding attenuator protein-like domain LS838_RS05035 6e6febfaa35291d165f3a4b2b4c65532 233 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 1 225 7.8E-40 T 09-03-2017 IPR002838 Mitochondrial biogenesis protein AIM24 LS838_RS05035 6e6febfaa35291d165f3a4b2b4c65532 233 Pfam PF01987 Mitochondrial biogenesis AIM24 4 213 2.6E-50 T 09-03-2017 IPR002838 Mitochondrial biogenesis protein AIM24 LS838_RS06370 6b6a4deeef0534a662a4a77864b04d42 492 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 11 463 45.408 T 09-03-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 LS838_RS06370 6b6a4deeef0534a662a4a77864b04d42 492 Gene3D G3DSA:3.40.50.2020 270 438 9.2E-45 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS06370 6b6a4deeef0534a662a4a77864b04d42 492 PIRSF PIRSF000485 8 475 1.8E-168 T 09-03-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 LS838_RS06370 6b6a4deeef0534a662a4a77864b04d42 492 SUPERFAMILY SSF56235 12 254 4.55E-69 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LS838_RS06370 6b6a4deeef0534a662a4a77864b04d42 492 Gene3D G3DSA:3.60.20.10 12 255 1.5E-69 T 09-03-2017 IPR029055 Nucleophile aminohydrolases, N-terminal LS838_RS06370 6b6a4deeef0534a662a4a77864b04d42 492 Pfam PF13537 Glutamine amidotransferase domain 91 211 5.3E-23 T 09-03-2017 IPR017932 Glutamine amidotransferase type 2 domain LS838_RS06370 6b6a4deeef0534a662a4a77864b04d42 492 SUPERFAMILY SSF53271 248 469 5.24E-68 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS06370 6b6a4deeef0534a662a4a77864b04d42 492 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 12 462 3.7E-152 T 09-03-2017 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 LS838_RS06370 6b6a4deeef0534a662a4a77864b04d42 492 Pfam PF00156 Phosphoribosyl transferase domain 284 389 3.1E-8 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 LS838_RS00440 22c09d3d1980fffb90e57524a6dd7afb 181 PIRSF PIRSF016661 1 174 1.5E-32 T 09-03-2017 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 LS838_RS00440 22c09d3d1980fffb90e57524a6dd7afb 181 Pfam PF02632 BioY family 32 167 7.1E-33 T 09-03-2017 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 LS838_RS09840 fc1490dca12c87fa4723c3f203b33672 232 SUPERFAMILY SSF52540 1 209 6.23E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09840 fc1490dca12c87fa4723c3f203b33672 232 Pfam PF01712 Deoxynucleoside kinase 4 208 4.8E-62 T 09-03-2017 IPR031314 Deoxynucleoside kinase domain LS838_RS09840 fc1490dca12c87fa4723c3f203b33672 232 Gene3D G3DSA:3.40.50.300 2 207 9.7E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09840 fc1490dca12c87fa4723c3f203b33672 232 PIRSF PIRSF000705 1 214 1.9E-53 T 09-03-2017 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 LS838_RS03585 99405225c04a23a25e8d772a4431574e 220 SUPERFAMILY SSF55469 1 217 6.15E-40 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 LS838_RS03585 99405225c04a23a25e8d772a4431574e 220 Pfam PF00881 Nitroreductase family 8 196 7.6E-26 T 09-03-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 LS838_RS03585 99405225c04a23a25e8d772a4431574e 220 Gene3D G3DSA:3.40.109.10 122 218 2.0E-40 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 LS838_RS03585 99405225c04a23a25e8d772a4431574e 220 Gene3D G3DSA:3.40.109.10 2 85 2.0E-40 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 LS838_RS09720 5fff216e836e45b2b87512a7fae96813 514 Gene3D G3DSA:3.40.50.300 258 494 1.9E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09720 5fff216e836e45b2b87512a7fae96813 514 Gene3D G3DSA:3.40.50.300 6 237 1.5E-59 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09720 5fff216e836e45b2b87512a7fae96813 514 SMART SM00382 33 221 1.8E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS09720 5fff216e836e45b2b87512a7fae96813 514 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS09720 5fff216e836e45b2b87512a7fae96813 514 Pfam PF00005 ABC transporter 25 173 9.4E-27 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS09720 5fff216e836e45b2b87512a7fae96813 514 Pfam PF00005 ABC transporter 278 433 5.8E-13 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS09720 5fff216e836e45b2b87512a7fae96813 514 SUPERFAMILY SSF52540 7 231 4.33E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09720 5fff216e836e45b2b87512a7fae96813 514 SUPERFAMILY SSF52540 246 485 3.31E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01685 0381407237b04cbc8742797956e22c19 126 Pfam PF04977 Septum formation initiator 45 122 5.7E-14 T 09-03-2017 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 LS838_RS05765 8c7ba85a4815b5e88e8cc364e71ced95 580 SMART SM00382 356 535 1.4E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS05765 8c7ba85a4815b5e88e8cc364e71ced95 580 SUPERFAMILY SSF90123 3 315 1.96E-63 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS05765 8c7ba85a4815b5e88e8cc364e71ced95 580 SUPERFAMILY SSF52540 325 566 2.87E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05765 8c7ba85a4815b5e88e8cc364e71ced95 580 Pfam PF00005 ABC transporter 348 493 1.3E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS05765 8c7ba85a4815b5e88e8cc364e71ced95 580 Gene3D G3DSA:3.40.50.300 330 559 2.2E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05765 8c7ba85a4815b5e88e8cc364e71ced95 580 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS05765 8c7ba85a4815b5e88e8cc364e71ced95 580 Pfam PF00664 ABC transporter transmembrane region 17 283 2.0E-39 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS05765 8c7ba85a4815b5e88e8cc364e71ced95 580 Gene3D G3DSA:1.20.1560.10 2 313 2.5E-58 T 09-03-2017 LS838_RS03995 f9e99b88b9a758c2abe2443b9e8ce37a 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 205 1.0E-12 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LS838_RS03995 f9e99b88b9a758c2abe2443b9e8ce37a 222 Gene3D G3DSA:3.40.50.2300 1 124 2.0E-40 T 09-03-2017 LS838_RS03995 f9e99b88b9a758c2abe2443b9e8ce37a 222 Pfam PF00072 Response regulator receiver domain 3 112 7.0E-29 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LS838_RS03995 f9e99b88b9a758c2abe2443b9e8ce37a 222 SMART SM00862 145 219 9.5E-10 T 09-03-2017 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 LS838_RS03995 f9e99b88b9a758c2abe2443b9e8ce37a 222 Gene3D G3DSA:1.10.10.10 125 214 1.6E-16 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS03995 f9e99b88b9a758c2abe2443b9e8ce37a 222 SUPERFAMILY SSF52172 1 128 2.85E-38 T 09-03-2017 IPR011006 CheY-like superfamily LS838_RS03995 f9e99b88b9a758c2abe2443b9e8ce37a 222 SMART SM00448 1 112 2.9E-43 T 09-03-2017 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 LS838_RS03995 f9e99b88b9a758c2abe2443b9e8ce37a 222 SUPERFAMILY SSF46894 124 210 2.55E-14 T 09-03-2017 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 LS838_RS00470 ca583c1d09d9e3572d7c7b11e97bb353 285 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 135 152 - T 09-03-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LS838_RS00470 ca583c1d09d9e3572d7c7b11e97bb353 285 Pfam PF00248 Aldo/keto reductase family 21 270 2.4E-51 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain LS838_RS00470 ca583c1d09d9e3572d7c7b11e97bb353 285 Gene3D G3DSA:3.20.20.100 8 272 4.4E-102 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain LS838_RS00470 ca583c1d09d9e3572d7c7b11e97bb353 285 PIRSF PIRSF000097 4 276 3.7E-82 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LS838_RS00470 ca583c1d09d9e3572d7c7b11e97bb353 285 SUPERFAMILY SSF51430 9 270 3.54E-93 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain LS838_RS00470 ca583c1d09d9e3572d7c7b11e97bb353 285 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 45 62 - T 09-03-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LS838_RS00470 ca583c1d09d9e3572d7c7b11e97bb353 285 PRINTS PR00069 Aldo-keto reductase signature 41 65 2.0E-42 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LS838_RS00470 ca583c1d09d9e3572d7c7b11e97bb353 285 PRINTS PR00069 Aldo-keto reductase signature 169 198 2.0E-42 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LS838_RS00470 ca583c1d09d9e3572d7c7b11e97bb353 285 PRINTS PR00069 Aldo-keto reductase signature 206 230 2.0E-42 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LS838_RS00470 ca583c1d09d9e3572d7c7b11e97bb353 285 PRINTS PR00069 Aldo-keto reductase signature 97 115 2.0E-42 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LS838_RS00470 ca583c1d09d9e3572d7c7b11e97bb353 285 PRINTS PR00069 Aldo-keto reductase signature 135 152 2.0E-42 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LS838_RS08095 9eeb17f309bc17b804383ee48779e6f5 349 Pfam PF13439 Glycosyltransferase Family 4 43 138 9.8E-7 T 09-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 LS838_RS08095 9eeb17f309bc17b804383ee48779e6f5 349 Pfam PF00534 Glycosyl transferases group 1 152 303 5.9E-16 T 09-03-2017 IPR001296 Glycosyl transferase, family 1 LS838_RS08095 9eeb17f309bc17b804383ee48779e6f5 349 SUPERFAMILY SSF53756 4 335 2.3E-51 T 09-03-2017 LS838_RS08095 9eeb17f309bc17b804383ee48779e6f5 349 Gene3D G3DSA:3.40.50.2000 122 311 9.6E-19 T 09-03-2017 LS838_RS02395 e114a285dcf7aa366532f7c3428f4187 281 Gene3D G3DSA:3.40.190.10 38 122 7.5E-31 T 09-03-2017 LS838_RS02395 e114a285dcf7aa366532f7c3428f4187 281 Gene3D G3DSA:3.40.190.10 227 264 7.5E-31 T 09-03-2017 LS838_RS02395 e114a285dcf7aa366532f7c3428f4187 281 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 264 2.1E-52 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LS838_RS02395 e114a285dcf7aa366532f7c3428f4187 281 SMART SM00079 41 265 0.0014 T 09-03-2017 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LS838_RS02395 e114a285dcf7aa366532f7c3428f4187 281 Gene3D G3DSA:3.40.190.10 123 226 3.1E-18 T 09-03-2017 LS838_RS02395 e114a285dcf7aa366532f7c3428f4187 281 SUPERFAMILY SSF53850 8 264 7.24E-60 T 09-03-2017 LS838_RS02395 e114a285dcf7aa366532f7c3428f4187 281 SMART SM00062 41 266 3.4E-51 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LS838_RS01930 cef1ca75aef9d0a16cd9e67728a01001 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 21.906 T 09-03-2017 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 LS838_RS01930 cef1ca75aef9d0a16cd9e67728a01001 146 Gene3D G3DSA:3.100.10.10 32 146 1.0E-37 T 09-03-2017 LS838_RS01930 cef1ca75aef9d0a16cd9e67728a01001 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 5.4E-38 T 09-03-2017 IPR021131 Ribosomal protein L18e/L15P LS838_RS01930 cef1ca75aef9d0a16cd9e67728a01001 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 09-03-2017 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01930 cef1ca75aef9d0a16cd9e67728a01001 146 SUPERFAMILY SSF52080 4 145 3.27E-50 T 09-03-2017 IPR021131 Ribosomal protein L18e/L15P LS838_RS01930 cef1ca75aef9d0a16cd9e67728a01001 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 144 1.6E-55 T 09-03-2017 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06110 631b4f72e0c862e78a6d5a8d02f7e6cb 231 Gene3D G3DSA:1.10.1520.10 8 151 5.0E-45 T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 LS838_RS06110 631b4f72e0c862e78a6d5a8d02f7e6cb 231 Pfam PF00035 Double-stranded RNA binding motif 164 227 1.3E-16 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain LS838_RS06110 631b4f72e0c862e78a6d5a8d02f7e6cb 231 ProSitePatterns PS00517 Ribonuclease III family signature. 46 54 - T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 LS838_RS06110 631b4f72e0c862e78a6d5a8d02f7e6cb 231 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 10 227 1.5E-73 T 09-03-2017 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 LS838_RS06110 631b4f72e0c862e78a6d5a8d02f7e6cb 231 SUPERFAMILY SSF54768 119 227 8.6E-20 T 09-03-2017 LS838_RS06110 631b4f72e0c862e78a6d5a8d02f7e6cb 231 Gene3D G3DSA:3.30.160.20 162 227 8.7E-23 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain LS838_RS06110 631b4f72e0c862e78a6d5a8d02f7e6cb 231 Hamap MF_00104 Ribonuclease 3 [rnc]. 10 224 28.908 T 09-03-2017 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 LS838_RS06110 631b4f72e0c862e78a6d5a8d02f7e6cb 231 Pfam PF14622 Ribonuclease-III-like 22 147 2.4E-29 T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 LS838_RS06110 631b4f72e0c862e78a6d5a8d02f7e6cb 231 SUPERFAMILY SSF69065 7 160 2.09E-45 T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 LS838_RS06110 631b4f72e0c862e78a6d5a8d02f7e6cb 231 SMART SM00535 22 157 2.7E-52 T 09-03-2017 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 LS838_RS06110 631b4f72e0c862e78a6d5a8d02f7e6cb 231 SMART SM00358 163 228 1.7E-15 T 09-03-2017 IPR014720 Double-stranded RNA-binding domain LS838_RS02765 181455d04419de870e7c469eac6c595c 219 Gene3D G3DSA:3.30.230.30 8 133 6.8E-46 T 09-03-2017 IPR001498 Impact, N-terminal LS838_RS02765 181455d04419de870e7c469eac6c595c 219 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 3.6E-13 T 09-03-2017 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal LS838_RS02765 181455d04419de870e7c469eac6c595c 219 Pfam PF01205 Uncharacterized protein family UPF0029 21 125 2.1E-29 T 09-03-2017 IPR001498 Impact, N-terminal LS838_RS02765 181455d04419de870e7c469eac6c595c 219 Gene3D G3DSA:3.30.70.240 137 211 7.2E-10 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain LS838_RS02765 181455d04419de870e7c469eac6c595c 219 SUPERFAMILY SSF54211 8 133 2.73E-41 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LS838_RS02765 181455d04419de870e7c469eac6c595c 219 SUPERFAMILY SSF54980 138 203 8.63E-9 T 09-03-2017 IPR009022 Elongation factor G, III-V domain LS838_RS02765 181455d04419de870e7c469eac6c595c 219 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 6 200 4.5E-54 T 09-03-2017 IPR015796 Impact family, bacterial/archaeal LS838_RS08660 2dfdbae32d4d67594b51e66fb1ec8340 337 PIRSF PIRSF000114 1 335 1.2E-95 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS08660 2dfdbae32d4d67594b51e66fb1ec8340 337 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS08660 2dfdbae32d4d67594b51e66fb1ec8340 337 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 325 34.05 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS08660 2dfdbae32d4d67594b51e66fb1ec8340 337 SUPERFAMILY SSF48179 182 334 5.95E-51 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LS838_RS08660 2dfdbae32d4d67594b51e66fb1ec8340 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 9.6E-42 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS08660 2dfdbae32d4d67594b51e66fb1ec8340 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 55 82 9.6E-42 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS08660 2dfdbae32d4d67594b51e66fb1ec8340 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 9.6E-42 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS08660 2dfdbae32d4d67594b51e66fb1ec8340 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 9.6E-42 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS08660 2dfdbae32d4d67594b51e66fb1ec8340 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 9.6E-42 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS08660 2dfdbae32d4d67594b51e66fb1ec8340 337 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 9.6E-42 T 09-03-2017 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS08660 2dfdbae32d4d67594b51e66fb1ec8340 337 Gene3D G3DSA:3.40.50.720 2 190 1.4E-56 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS08660 2dfdbae32d4d67594b51e66fb1ec8340 337 Gene3D G3DSA:1.10.1040.10 192 335 3.0E-52 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LS838_RS08660 2dfdbae32d4d67594b51e66fb1ec8340 337 SUPERFAMILY SSF51735 3 181 1.72E-50 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS08660 2dfdbae32d4d67594b51e66fb1ec8340 337 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 323 1.2E-47 T 09-03-2017 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS08660 2dfdbae32d4d67594b51e66fb1ec8340 337 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 163 8.5E-43 T 09-03-2017 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 LS838_RS03705 948171cffb52a2f81d899f12d7037634 312 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 300 2.1E-37 T 09-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LS838_RS03705 948171cffb52a2f81d899f12d7037634 312 Gene3D G3DSA:3.90.245.10 2 307 9.5E-59 T 09-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LS838_RS03705 948171cffb52a2f81d899f12d7037634 312 SUPERFAMILY SSF53590 1 307 3.14E-75 T 09-03-2017 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain LS838_RS02415 a5dbb0bd8f38f428a02fa0463b22839d 305 SUPERFAMILY SSF53474 46 193 2.41E-12 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS02415 a5dbb0bd8f38f428a02fa0463b22839d 305 Pfam PF11187 Protein of unknown function (DUF2974) 103 191 6.6E-6 T 09-03-2017 IPR024499 Protein of unknown function DUF2974 LS838_RS02415 a5dbb0bd8f38f428a02fa0463b22839d 305 Gene3D G3DSA:3.40.50.1820 205 272 8.0E-6 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS02415 a5dbb0bd8f38f428a02fa0463b22839d 305 Gene3D G3DSA:3.40.50.1820 100 163 8.0E-6 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS03160 475facc76b0d16e6191aedc1bac3c2b4 334 Pfam PF00144 Beta-lactamase 12 312 1.4E-51 T 09-03-2017 IPR001466 Beta-lactamase-related LS838_RS03160 475facc76b0d16e6191aedc1bac3c2b4 334 Gene3D G3DSA:3.40.710.10 6 330 3.1E-65 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS03160 475facc76b0d16e6191aedc1bac3c2b4 334 SUPERFAMILY SSF56601 10 322 9.55E-67 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS08775 fe90beda130fab77f4ac5fa80f675733 125 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 3 107 1.9E-33 T 09-03-2017 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain LS838_RS08775 fe90beda130fab77f4ac5fa80f675733 125 SUPERFAMILY SSF53062 2 118 2.09E-28 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LS838_RS08775 fe90beda130fab77f4ac5fa80f675733 125 Gene3D G3DSA:3.40.50.510 2 120 2.9E-36 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LS838_RS08775 fe90beda130fab77f4ac5fa80f675733 125 Pfam PF03610 PTS system fructose IIA component 4 105 3.1E-23 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LS838_RS07065 ffe72f5c1c5c6cb6085961a662d9b729 283 Gene3D G3DSA:2.30.30.60 131 177 1.8E-14 T 09-03-2017 LS838_RS07065 ffe72f5c1c5c6cb6085961a662d9b729 283 SUPERFAMILY SSF82861 31 114 1.44E-13 T 09-03-2017 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 LS838_RS07065 ffe72f5c1c5c6cb6085961a662d9b729 283 Pfam PF00924 Mechanosensitive ion channel 73 211 8.9E-33 T 09-03-2017 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 LS838_RS07065 ffe72f5c1c5c6cb6085961a662d9b729 283 SUPERFAMILY SSF50182 116 178 8.5E-14 T 09-03-2017 IPR010920 LSM domain LS838_RS02900 38df438c4e4199bca36bf6961229fc56 403 Gene3D G3DSA:3.40.50.1270 192 390 2.4E-82 T 09-03-2017 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02900 38df438c4e4199bca36bf6961229fc56 403 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 09-03-2017 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02900 38df438c4e4199bca36bf6961229fc56 403 Gene3D G3DSA:3.40.50.1260 5 191 2.8E-69 T 09-03-2017 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02900 38df438c4e4199bca36bf6961229fc56 403 SUPERFAMILY SSF53748 1 402 2.83E-151 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02900 38df438c4e4199bca36bf6961229fc56 403 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 402 41.617 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02900 38df438c4e4199bca36bf6961229fc56 403 Pfam PF00162 Phosphoglycerate kinase 6 392 3.8E-157 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02900 38df438c4e4199bca36bf6961229fc56 403 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 3.3E-92 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02900 38df438c4e4199bca36bf6961229fc56 403 PRINTS PR00477 Phosphoglycerate kinase family signature 145 167 3.3E-92 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02900 38df438c4e4199bca36bf6961229fc56 403 PRINTS PR00477 Phosphoglycerate kinase family signature 321 346 3.3E-92 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02900 38df438c4e4199bca36bf6961229fc56 403 PRINTS PR00477 Phosphoglycerate kinase family signature 203 222 3.3E-92 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02900 38df438c4e4199bca36bf6961229fc56 403 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 3.3E-92 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02900 38df438c4e4199bca36bf6961229fc56 403 PRINTS PR00477 Phosphoglycerate kinase family signature 180 202 3.3E-92 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02900 38df438c4e4199bca36bf6961229fc56 403 PRINTS PR00477 Phosphoglycerate kinase family signature 355 366 3.3E-92 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02900 38df438c4e4199bca36bf6961229fc56 403 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 3.3E-92 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02900 38df438c4e4199bca36bf6961229fc56 403 PRINTS PR00477 Phosphoglycerate kinase family signature 378 395 3.3E-92 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02900 38df438c4e4199bca36bf6961229fc56 403 PIRSF PIRSF000724 1 403 1.8E-142 T 09-03-2017 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS07765 5e34283645634bf47e3f1aae314266a5 451 Pfam PF00324 Amino acid permease 15 425 4.8E-78 T 09-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LS838_RS07765 5e34283645634bf47e3f1aae314266a5 451 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 09-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LS838_RS07765 5e34283645634bf47e3f1aae314266a5 451 PIRSF PIRSF006060 1 449 1.6E-58 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LS838_RS02865 4ef3c3a6a83466400a2636c134a6f5a1 498 Pfam PF13457 SH3-like domain 21 90 1.1E-8 T 09-03-2017 IPR025987 SH3-like domain KEGG: 00511+3.2.1.96 LS838_RS02865 4ef3c3a6a83466400a2636c134a6f5a1 498 SUPERFAMILY SSF82057 27 93 1.83E-6 T 09-03-2017 LS838_RS02865 4ef3c3a6a83466400a2636c134a6f5a1 498 Gene3D G3DSA:2.30.30.170 22 92 8.5E-5 T 09-03-2017 LS838_RS04210 cfed31454e7c48371753f99eb330ff0e 291 Pfam PF00588 SpoU rRNA Methylase family 141 283 1.0E-24 T 09-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LS838_RS04210 cfed31454e7c48371753f99eb330ff0e 291 SUPERFAMILY SSF75217 119 288 4.45E-30 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases LS838_RS04210 cfed31454e7c48371753f99eb330ff0e 291 Gene3D G3DSA:3.30.1330.30 39 120 2.0E-7 T 09-03-2017 IPR029064 50S ribosomal protein L30e-like LS838_RS04210 cfed31454e7c48371753f99eb330ff0e 291 Gene3D G3DSA:3.40.1280.10 136 287 5.9E-46 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LS838_RS04210 cfed31454e7c48371753f99eb330ff0e 291 SUPERFAMILY SSF55315 12 121 1.41E-9 T 09-03-2017 IPR029064 50S ribosomal protein L30e-like LS838_RS07925 94fda0fea40121443f3fffdf418e068f 632 SUPERFAMILY SSF51445 75 510 6.72E-98 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS07925 94fda0fea40121443f3fffdf418e068f 632 Gene3D G3DSA:3.20.20.80 136 503 5.0E-81 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS07925 94fda0fea40121443f3fffdf418e068f 632 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 522 619 8.0E-17 T 09-03-2017 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 LS838_RS07925 94fda0fea40121443f3fffdf418e068f 632 Gene3D G3DSA:2.60.40.1180 519 619 1.7E-25 T 09-03-2017 IPR013780 Glycosyl hydrolase, all-beta LS838_RS07925 94fda0fea40121443f3fffdf418e068f 632 Gene3D G3DSA:2.60.40.10 11 112 9.1E-29 T 09-03-2017 IPR013783 Immunoglobulin-like fold LS838_RS07925 94fda0fea40121443f3fffdf418e068f 632 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 23 99 5.7E-19 T 09-03-2017 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 LS838_RS07925 94fda0fea40121443f3fffdf418e068f 632 SUPERFAMILY SSF51011 518 619 3.6E-23 T 09-03-2017 LS838_RS07925 94fda0fea40121443f3fffdf418e068f 632 Pfam PF00128 Alpha amylase, catalytic domain 168 238 4.0E-8 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LS838_RS07925 94fda0fea40121443f3fffdf418e068f 632 Pfam PF00128 Alpha amylase, catalytic domain 272 469 8.1E-5 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LS838_RS07925 94fda0fea40121443f3fffdf418e068f 632 SUPERFAMILY SSF81296 31 100 9.1E-12 T 09-03-2017 IPR014756 Immunoglobulin E-set LS838_RS07925 94fda0fea40121443f3fffdf418e068f 632 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 21 617 6.8E-195 T 09-03-2017 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 LS838_RS07925 94fda0fea40121443f3fffdf418e068f 632 PIRSF PIRSF000463 1 630 1.3E-242 T 09-03-2017 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 LS838_RS07925 94fda0fea40121443f3fffdf418e068f 632 SMART SM00642 143 503 9.5E-8 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LS838_RS03490 7a9918792d8337731793f2dd1b2b9f0d 184 PRINTS PR01576 Peptide deformylase signature 47 76 2.5E-23 T 09-03-2017 IPR023635 Peptide deformylase LS838_RS03490 7a9918792d8337731793f2dd1b2b9f0d 184 PRINTS PR01576 Peptide deformylase signature 141 170 2.5E-23 T 09-03-2017 IPR023635 Peptide deformylase LS838_RS03490 7a9918792d8337731793f2dd1b2b9f0d 184 PRINTS PR01576 Peptide deformylase signature 109 120 2.5E-23 T 09-03-2017 IPR023635 Peptide deformylase LS838_RS03490 7a9918792d8337731793f2dd1b2b9f0d 184 PRINTS PR01576 Peptide deformylase signature 122 140 2.5E-23 T 09-03-2017 IPR023635 Peptide deformylase LS838_RS03490 7a9918792d8337731793f2dd1b2b9f0d 184 PIRSF PIRSF004749 2 183 2.7E-41 T 09-03-2017 IPR023635 Peptide deformylase LS838_RS03490 7a9918792d8337731793f2dd1b2b9f0d 184 Hamap MF_00163 Peptide deformylase [def]. 3 183 26.182 T 09-03-2017 IPR023635 Peptide deformylase LS838_RS03490 7a9918792d8337731793f2dd1b2b9f0d 184 Pfam PF01327 Polypeptide deformylase 4 172 8.2E-44 T 09-03-2017 IPR023635 Peptide deformylase LS838_RS03490 7a9918792d8337731793f2dd1b2b9f0d 184 Gene3D G3DSA:3.90.45.10 4 179 1.6E-54 T 09-03-2017 IPR023635 Peptide deformylase LS838_RS03490 7a9918792d8337731793f2dd1b2b9f0d 184 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 180 1.1E-39 T 09-03-2017 IPR023635 Peptide deformylase LS838_RS03490 7a9918792d8337731793f2dd1b2b9f0d 184 SUPERFAMILY SSF56420 3 179 8.77E-55 T 09-03-2017 IPR023635 Peptide deformylase LS838_RS07025 b287ed151053ae16ed1f905c6ee4a46c 186 PIRSF PIRSF012565 9 186 1.2E-45 T 09-03-2017 IPR009370 Protein of unknown function DUF1027 LS838_RS07025 b287ed151053ae16ed1f905c6ee4a46c 186 Pfam PF06265 Protein of unknown function (DUF1027) 42 124 2.1E-29 T 09-03-2017 IPR009370 Protein of unknown function DUF1027 LS838_RS01615 d954fd36768e02f452423ebca104a4a6 437 Gene3D G3DSA:1.10.3210.10 12 268 1.4E-86 T 09-03-2017 IPR006674 HD domain LS838_RS01615 d954fd36768e02f452423ebca104a4a6 437 SUPERFAMILY SSF109604 8 423 3.56E-119 T 09-03-2017 LS838_RS01615 d954fd36768e02f452423ebca104a4a6 437 Pfam PF01966 HD domain 62 137 3.7E-10 T 09-03-2017 IPR006674 HD domain LS838_RS01615 d954fd36768e02f452423ebca104a4a6 437 SMART SM00471 58 196 1.1E-12 T 09-03-2017 IPR003607 HD/PDEase domain LS838_RS03285 be378a318f89333fb1029dcd64decdc4 203 Pfam PF01479 S4 domain 93 140 2.4E-21 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS03285 be378a318f89333fb1029dcd64decdc4 203 Gene3D G3DSA:1.10.1050.10 1 96 1.4E-35 T 09-03-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 LS838_RS03285 be378a318f89333fb1029dcd64decdc4 203 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 201 3.2E-77 T 09-03-2017 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 LS838_RS03285 be378a318f89333fb1029dcd64decdc4 203 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 92 3.4E-24 T 09-03-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 LS838_RS03285 be378a318f89333fb1029dcd64decdc4 203 SMART SM01390 3 92 2.9E-40 T 09-03-2017 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 LS838_RS03285 be378a318f89333fb1029dcd64decdc4 203 SUPERFAMILY SSF55174 3 201 5.63E-63 T 09-03-2017 LS838_RS03285 be378a318f89333fb1029dcd64decdc4 203 ProSitePatterns PS00632 Ribosomal protein S4 signature. 91 115 - T 09-03-2017 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS03285 be378a318f89333fb1029dcd64decdc4 203 SMART SM00363 93 157 1.8E-20 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS03285 be378a318f89333fb1029dcd64decdc4 203 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 201 34.542 T 09-03-2017 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 LS838_RS03285 be378a318f89333fb1029dcd64decdc4 203 Gene3D G3DSA:3.10.290.10 97 192 1.5E-34 T 09-03-2017 IPR002942 RNA-binding S4 domain GO:0003723 LS838_RS09650 827445eaca8126a99ab851238577c9fe 405 Pfam PF07690 Major Facilitator Superfamily 15 354 2.0E-9 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LS838_RS09650 827445eaca8126a99ab851238577c9fe 405 SUPERFAMILY SSF103473 14 398 4.84E-17 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS09650 827445eaca8126a99ab851238577c9fe 405 Gene3D G3DSA:1.20.1250.20 15 189 1.4E-6 T 09-03-2017 LS838_RS01125 c702927ec8c1a9b735ac321b15588b54 736 SUPERFAMILY SSF51998 130 696 2.38E-189 T 09-03-2017 LS838_RS01125 c702927ec8c1a9b735ac321b15588b54 736 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 125 716 2.3E-178 T 09-03-2017 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 LS838_RS01125 c702927ec8c1a9b735ac321b15588b54 736 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 125 716 6.6E-177 T 09-03-2017 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 LS838_RS01125 c702927ec8c1a9b735ac321b15588b54 736 ProSitePatterns PS00850 Glycine radical domain signature. 687 695 - T 09-03-2017 IPR019777 Formate C-acetyltransferase glycine radical, conserved site LS838_RS01125 c702927ec8c1a9b735ac321b15588b54 736 Gene3D G3DSA:3.20.70.20 132 696 8.2E-180 T 09-03-2017 LS838_RS09380 aa5d6b9633be6d5731b064730f133492 696 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 473 491 - T 09-03-2017 IPR028299 ClpA/B, conserved site 2 LS838_RS09380 aa5d6b9633be6d5731b064730f133492 696 Gene3D G3DSA:1.10.8.60 617 693 3.6E-27 T 09-03-2017 LS838_RS09380 aa5d6b9633be6d5731b064730f133492 696 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 113 246 3.3E-14 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LS838_RS09380 aa5d6b9633be6d5731b064730f133492 696 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 443 461 5.1E-28 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 LS838_RS09380 aa5d6b9633be6d5731b064730f133492 696 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 488 506 5.1E-28 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 LS838_RS09380 aa5d6b9633be6d5731b064730f133492 696 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 518 536 5.1E-28 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 LS838_RS09380 aa5d6b9633be6d5731b064730f133492 696 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 551 565 5.1E-28 T 09-03-2017 IPR001270 ClpA/B family GO:0005524 LS838_RS09380 aa5d6b9633be6d5731b064730f133492 696 SUPERFAMILY SSF52540 388 672 1.95E-73 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09380 aa5d6b9633be6d5731b064730f133492 696 SMART SM01086 605 692 4.4E-31 T 09-03-2017 IPR019489 Clp ATPase, C-terminal LS838_RS09380 aa5d6b9633be6d5731b064730f133492 696 Gene3D G3DSA:3.40.50.300 392 616 3.1E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09380 aa5d6b9633be6d5731b064730f133492 696 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 605 675 5.4E-23 T 09-03-2017 IPR019489 Clp ATPase, C-terminal LS838_RS09380 aa5d6b9633be6d5731b064730f133492 696 SUPERFAMILY SSF52540 70 345 7.28E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09380 aa5d6b9633be6d5731b064730f133492 696 SMART SM00382 439 606 4.7E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS09380 aa5d6b9633be6d5731b064730f133492 696 SMART SM00382 108 254 8.7E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS09380 aa5d6b9633be6d5731b064730f133492 696 Gene3D G3DSA:3.40.50.300 71 254 1.1E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09380 aa5d6b9633be6d5731b064730f133492 696 Pfam PF07724 AAA domain (Cdc48 subfamily) 438 598 1.2E-42 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LS838_RS09380 aa5d6b9633be6d5731b064730f133492 696 Gene3D G3DSA:1.10.8.60 256 339 1.7E-25 T 09-03-2017 LS838_RS08345 2d4e692ecfec7f7176c413e76d94d828 360 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 4 31 1.0E-5 T 09-03-2017 LS838_RS00120 83050fa3639d76ce0d450da878674b27 526 ProSitePatterns PS00211 ABC transporters family signature. 448 462 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS00120 83050fa3639d76ce0d450da878674b27 526 SMART SM00382 340 522 3.3E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS00120 83050fa3639d76ce0d450da878674b27 526 Gene3D G3DSA:1.20.1560.10 6 291 8.3E-27 T 09-03-2017 LS838_RS00120 83050fa3639d76ce0d450da878674b27 526 Pfam PF00664 ABC transporter transmembrane region 46 277 2.1E-11 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS00120 83050fa3639d76ce0d450da878674b27 526 Pfam PF00005 ABC transporter 335 475 1.3E-27 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS00120 83050fa3639d76ce0d450da878674b27 526 SUPERFAMILY SSF90123 3 289 9.03E-35 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS00120 83050fa3639d76ce0d450da878674b27 526 SUPERFAMILY SSF52540 329 522 9.61E-38 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00120 83050fa3639d76ce0d450da878674b27 526 Gene3D G3DSA:3.40.50.300 329 522 7.0E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03665 f371a83752659d2d4df99d39aa6481ee 401 Gene3D G3DSA:3.40.640.10 57 277 3.2E-73 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LS838_RS03665 f371a83752659d2d4df99d39aa6481ee 401 Gene3D G3DSA:3.90.1150.10 278 392 1.1E-8 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LS838_RS03665 f371a83752659d2d4df99d39aa6481ee 401 SUPERFAMILY SSF53383 4 392 4.45E-93 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase LS838_RS03665 f371a83752659d2d4df99d39aa6481ee 401 Pfam PF00155 Aminotransferase class I and II 48 388 3.7E-28 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LS838_RS02845 2fe36c49b36bc988c73573c595a39aca 292 Gene3D G3DSA:3.40.50.300 4 164 8.4E-18 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02845 2fe36c49b36bc988c73573c595a39aca 292 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 7 288 40.109 T 09-03-2017 IPR005337 RapZ-like family GO:0005524 LS838_RS02845 2fe36c49b36bc988c73573c595a39aca 292 PIRSF PIRSF005052 7 290 2.1E-104 T 09-03-2017 IPR005337 RapZ-like family GO:0005524 LS838_RS02845 2fe36c49b36bc988c73573c595a39aca 292 Pfam PF03668 P-loop ATPase protein family 8 288 6.3E-103 T 09-03-2017 IPR005337 RapZ-like family GO:0005524 LS838_RS02845 2fe36c49b36bc988c73573c595a39aca 292 SUPERFAMILY SSF52540 6 163 3.16E-14 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07410 58e40049703d5d010c16df90ff1a9d87 141 Gene3D G3DSA:1.10.10.250 72 140 1.9E-32 T 09-03-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 LS838_RS07410 58e40049703d5d010c16df90ff1a9d87 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 8.9E-30 T 09-03-2017 IPR020784 Ribosomal protein L11, N-terminal LS838_RS07410 58e40049703d5d010c16df90ff1a9d87 141 SUPERFAMILY SSF54747 3 72 2.09E-29 T 09-03-2017 IPR020784 Ribosomal protein L11, N-terminal LS838_RS07410 58e40049703d5d010c16df90ff1a9d87 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 09-03-2017 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS07410 58e40049703d5d010c16df90ff1a9d87 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 7.2E-26 T 09-03-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 LS838_RS07410 58e40049703d5d010c16df90ff1a9d87 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.5E-64 T 09-03-2017 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS07410 58e40049703d5d010c16df90ff1a9d87 141 Gene3D G3DSA:3.30.1550.10 2 71 8.7E-37 T 09-03-2017 IPR020784 Ribosomal protein L11, N-terminal LS838_RS07410 58e40049703d5d010c16df90ff1a9d87 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 3.0E-15 T 09-03-2017 LS838_RS07410 58e40049703d5d010c16df90ff1a9d87 141 SUPERFAMILY SSF46906 67 139 1.31E-27 T 09-03-2017 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 LS838_RS07410 58e40049703d5d010c16df90ff1a9d87 141 SMART SM00649 9 140 2.6E-83 T 09-03-2017 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 LS838_RS07410 58e40049703d5d010c16df90ff1a9d87 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 31.168 T 09-03-2017 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 LS838_RS05470 9fa4c03874cef0260ab1bc22a30b5a81 861 SUPERFAMILY SSF53649 454 722 3.92E-6 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LS838_RS05470 9fa4c03874cef0260ab1bc22a30b5a81 861 Pfam PF08665 PglZ domain 463 635 7.9E-46 T 09-03-2017 IPR013973 PglZ domain LS838_RS05470 9fa4c03874cef0260ab1bc22a30b5a81 861 TIGRFAM TIGR02687 TIGR02687: TIGR02687 family protein 14 848 8.8E-170 T 09-03-2017 IPR014060 Conserved hypothetical protein CHP02687 LS838_RS03640 c89c76f4d3a1213900cf8adf4ee543b5 549 SUPERFAMILY SSF53795 235 543 4.97E-62 T 09-03-2017 LS838_RS03640 c89c76f4d3a1213900cf8adf4ee543b5 549 Pfam PF01293 Phosphoenolpyruvate carboxykinase 118 475 3.3E-14 T 09-03-2017 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 LS838_RS03640 c89c76f4d3a1213900cf8adf4ee543b5 549 Gene3D G3DSA:3.90.228.20 363 531 8.2E-23 T 09-03-2017 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 LS838_RS03640 c89c76f4d3a1213900cf8adf4ee543b5 549 Gene3D G3DSA:3.90.228.20 236 306 8.2E-23 T 09-03-2017 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 LS838_RS03640 c89c76f4d3a1213900cf8adf4ee543b5 549 SUPERFAMILY SSF68923 53 232 1.34E-33 T 09-03-2017 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 Gene3D G3DSA:3.40.50.1000 448 587 1.1E-55 T 09-03-2017 IPR023214 HAD-like domain LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 Gene3D G3DSA:3.40.50.1000 301 345 1.1E-55 T 09-03-2017 IPR023214 HAD-like domain LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 Gene3D G3DSA:2.70.150.10 68 229 1.2E-30 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 SUPERFAMILY SSF81653 134 229 5.36E-26 T 09-03-2017 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 519 538 5.3E-31 T 09-03-2017 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 467 477 5.3E-31 T 09-03-2017 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 330 344 5.3E-31 T 09-03-2017 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 179 193 5.3E-31 T 09-03-2017 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 445 456 5.3E-31 T 09-03-2017 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 542 554 5.3E-31 T 09-03-2017 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 SUPERFAMILY SSF56784 328 348 6.79E-57 T 09-03-2017 IPR023214 HAD-like domain LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 SUPERFAMILY SSF56784 417 624 6.79E-57 T 09-03-2017 IPR023214 HAD-like domain LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 Gene3D G3DSA:3.40.1110.10 346 447 2.6E-19 T 09-03-2017 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 SUPERFAMILY SSF81665 230 324 9.55E-18 T 09-03-2017 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 SUPERFAMILY SSF81665 82 130 9.55E-18 T 09-03-2017 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 SUPERFAMILY SSF81665 568 618 9.55E-18 T 09-03-2017 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 69 627 2.3E-187 T 09-03-2017 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 332 338 - T 09-03-2017 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 Pfam PF00702 haloacid dehalogenase-like hydrolase 326 533 6.2E-42 T 09-03-2017 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 Pfam PF00122 E1-E2 ATPase 100 321 5.8E-66 T 09-03-2017 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 ProSitePatterns PS01229 Hypothetical cof family signature 2. 519 541 - T 09-03-2017 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 PRINTS PR00943 Copper-transporting ATPase signature 54 73 1.8E-8 T 09-03-2017 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 PRINTS PR00943 Copper-transporting ATPase signature 497 514 1.8E-8 T 09-03-2017 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 PRINTS PR00943 Copper-transporting ATPase signature 592 606 1.8E-8 T 09-03-2017 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 PRINTS PR00943 Copper-transporting ATPase signature 313 328 1.8E-8 T 09-03-2017 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 PRINTS PR00943 Copper-transporting ATPase signature 252 266 1.8E-8 T 09-03-2017 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 101 602 1.3E-94 T 09-03-2017 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 LS838_RS03005 d6477371b6ff096de10050a8cac91317 638 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 52 627 1.9E-188 T 09-03-2017 LS838_RS03865 62d1d148ba85fdaf9f07d7bfc7dd03a6 91 Pfam PF00216 Bacterial DNA-binding protein 3 91 6.5E-38 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LS838_RS03865 62d1d148ba85fdaf9f07d7bfc7dd03a6 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 09-03-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 LS838_RS03865 62d1d148ba85fdaf9f07d7bfc7dd03a6 91 SUPERFAMILY SSF47729 3 91 1.09E-34 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LS838_RS03865 62d1d148ba85fdaf9f07d7bfc7dd03a6 91 SMART SM00411 2 91 1.5E-49 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LS838_RS03865 62d1d148ba85fdaf9f07d7bfc7dd03a6 91 Gene3D G3DSA:4.10.520.10 3 91 5.2E-41 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LS838_RS03865 62d1d148ba85fdaf9f07d7bfc7dd03a6 91 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.3E-21 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LS838_RS03865 62d1d148ba85fdaf9f07d7bfc7dd03a6 91 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.3E-21 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LS838_RS03865 62d1d148ba85fdaf9f07d7bfc7dd03a6 91 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.3E-21 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LS838_RS01220 8a986c00b7b3ed5dcfb99ea1886a1045 427 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 100 246 1.5E-44 T 09-03-2017 IPR004474 Cell envelope-related transcriptional attenuator domain LS838_RS01220 8a986c00b7b3ed5dcfb99ea1886a1045 427 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 99 245 4.2E-41 T 09-03-2017 IPR004474 Cell envelope-related transcriptional attenuator domain LS838_RS06695 bf2e9eb325f49f8b490ed9441f540063 155 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 3.5E-60 T 09-03-2017 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 LS838_RS06695 bf2e9eb325f49f8b490ed9441f540063 155 Pfam PF03477 ATP cone domain 50 136 1.1E-22 T 09-03-2017 IPR005144 ATP-cone domain Reactome: R-HSA-499943 LS838_RS06695 bf2e9eb325f49f8b490ed9441f540063 155 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 154 82.748 T 09-03-2017 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 LS838_RS01700 38718b4cc4f45f92d134ff98172fbc24 737 Gene3D G3DSA:1.10.8.60 368 432 3.8E-28 T 09-03-2017 LS838_RS01700 38718b4cc4f45f92d134ff98172fbc24 737 Pfam PF06480 FtsH Extracellular 13 123 2.9E-9 T 09-03-2017 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 LS838_RS01700 38718b4cc4f45f92d134ff98172fbc24 737 ProSitePatterns PS00674 AAA-protein family signature. 328 346 - T 09-03-2017 IPR003960 ATPase, AAA-type, conserved site GO:0005524 LS838_RS01700 38718b4cc4f45f92d134ff98172fbc24 737 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 225 357 1.7E-45 T 09-03-2017 IPR003959 ATPase, AAA-type, core GO:0005524 LS838_RS01700 38718b4cc4f45f92d134ff98172fbc24 737 Pfam PF01434 Peptidase family M41 419 621 2.1E-73 T 09-03-2017 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 LS838_RS01700 38718b4cc4f45f92d134ff98172fbc24 737 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 4 640 36.322 T 09-03-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 LS838_RS01700 38718b4cc4f45f92d134ff98172fbc24 737 SUPERFAMILY SSF52540 182 428 1.11E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01700 38718b4cc4f45f92d134ff98172fbc24 737 Gene3D G3DSA:3.40.50.300 182 367 1.5E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01700 38718b4cc4f45f92d134ff98172fbc24 737 SUPERFAMILY SSF140990 440 631 1.27E-63 T 09-03-2017 LS838_RS01700 38718b4cc4f45f92d134ff98172fbc24 737 SMART SM00382 221 360 9.5E-24 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS01700 38718b4cc4f45f92d134ff98172fbc24 737 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 135 623 7.3E-220 T 09-03-2017 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 LS838_RS02235 8a3e19246994b1961e239532c22050d4 216 SUPERFAMILY SSF46785 145 215 1.12E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS02235 8a3e19246994b1961e239532c22050d4 216 SMART SM00419 161 209 5.6E-11 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LS838_RS02235 8a3e19246994b1961e239532c22050d4 216 Pfam PF13545 Crp-like helix-turn-helix domain 147 215 4.9E-17 T 09-03-2017 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 LS838_RS02235 8a3e19246994b1961e239532c22050d4 216 Pfam PF00027 Cyclic nucleotide-binding domain 30 115 9.8E-17 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain LS838_RS02235 8a3e19246994b1961e239532c22050d4 216 SUPERFAMILY SSF51206 9 141 9.3E-30 T 09-03-2017 IPR018490 Cyclic nucleotide-binding-like LS838_RS02235 8a3e19246994b1961e239532c22050d4 216 SMART SM00100 11 130 2.4E-16 T 09-03-2017 IPR000595 Cyclic nucleotide-binding domain LS838_RS02235 8a3e19246994b1961e239532c22050d4 216 Gene3D G3DSA:2.60.120.10 9 141 2.1E-28 T 09-03-2017 IPR014710 RmlC-like jelly roll fold LS838_RS02235 8a3e19246994b1961e239532c22050d4 216 Gene3D G3DSA:1.10.10.10 145 214 3.0E-18 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS02680 774f416f7987eeb993b32bc4d68be1f6 297 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 128 142 - T 09-03-2017 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS02680 774f416f7987eeb993b32bc4d68be1f6 297 Pfam PF00849 RNA pseudouridylate synthase 82 236 1.1E-23 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS02680 774f416f7987eeb993b32bc4d68be1f6 297 SUPERFAMILY SSF55120 69 292 5.22E-59 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS01400 0de2e25d4f1d106223bc6304d286076d 280 Gene3D G3DSA:2.60.120.10 29 101 3.1E-8 T 09-03-2017 IPR014710 RmlC-like jelly roll fold LS838_RS01400 0de2e25d4f1d106223bc6304d286076d 280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 225 267 - T 09-03-2017 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 LS838_RS01400 0de2e25d4f1d106223bc6304d286076d 280 SUPERFAMILY SSF46689 224 274 1.79E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS01400 0de2e25d4f1d106223bc6304d286076d 280 Gene3D G3DSA:1.10.10.60 168 224 2.3E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS01400 0de2e25d4f1d106223bc6304d286076d 280 SMART SM00342 188 271 6.0E-19 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LS838_RS01400 0de2e25d4f1d106223bc6304d286076d 280 Pfam PF12833 Helix-turn-helix domain 194 272 2.4E-18 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LS838_RS01400 0de2e25d4f1d106223bc6304d286076d 280 SUPERFAMILY SSF51182 28 106 1.15E-6 T 09-03-2017 IPR011051 RmlC-like cupin domain LS838_RS01400 0de2e25d4f1d106223bc6304d286076d 280 Gene3D G3DSA:1.10.10.60 225 274 4.5E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS07155 57d3ff4d480efa2340966b60636a8784 537 SUPERFAMILY SSF48592 1 228 4.58E-68 T 09-03-2017 LS838_RS07155 57d3ff4d480efa2340966b60636a8784 537 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 521 3.7E-106 T 09-03-2017 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 LS838_RS07155 57d3ff4d480efa2340966b60636a8784 537 Gene3D G3DSA:3.50.7.10 195 365 1.7E-95 T 09-03-2017 IPR027409 GroEL-like apical domain LS838_RS07155 57d3ff4d480efa2340966b60636a8784 537 SUPERFAMILY SSF52029 182 374 2.49E-82 T 09-03-2017 IPR027409 GroEL-like apical domain LS838_RS07155 57d3ff4d480efa2340966b60636a8784 537 SUPERFAMILY SSF48592 370 521 1.98E-34 T 09-03-2017 LS838_RS07155 57d3ff4d480efa2340966b60636a8784 537 PRINTS PR00298 60kDa chaperonin signature 26 52 4.6E-70 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 LS838_RS07155 57d3ff4d480efa2340966b60636a8784 537 PRINTS PR00298 60kDa chaperonin signature 82 109 4.6E-70 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 LS838_RS07155 57d3ff4d480efa2340966b60636a8784 537 PRINTS PR00298 60kDa chaperonin signature 396 417 4.6E-70 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 LS838_RS07155 57d3ff4d480efa2340966b60636a8784 537 PRINTS PR00298 60kDa chaperonin signature 348 373 4.6E-70 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 LS838_RS07155 57d3ff4d480efa2340966b60636a8784 537 PRINTS PR00298 60kDa chaperonin signature 266 289 4.6E-70 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 LS838_RS07155 57d3ff4d480efa2340966b60636a8784 537 Hamap MF_00600 60 kDa chaperonin [groL]. 1 536 39.97 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 LS838_RS07155 57d3ff4d480efa2340966b60636a8784 537 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 524 6.5E-251 T 09-03-2017 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 LS838_RS07155 57d3ff4d480efa2340966b60636a8784 537 Gene3D G3DSA:1.10.560.10 366 516 2.6E-42 T 09-03-2017 IPR027413 GroEL-like equatorial domain LS838_RS07155 57d3ff4d480efa2340966b60636a8784 537 Gene3D G3DSA:1.10.560.10 3 194 3.7E-48 T 09-03-2017 IPR027413 GroEL-like equatorial domain LS838_RS07155 57d3ff4d480efa2340966b60636a8784 537 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 09-03-2017 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020 LS838_RS07955 c166c1c922db8848ab02c46e6aed16a9 411 Gene3D G3DSA:1.20.1250.20 8 198 5.0E-21 T 09-03-2017 LS838_RS07955 c166c1c922db8848ab02c46e6aed16a9 411 Gene3D G3DSA:1.20.1250.20 218 399 4.7E-18 T 09-03-2017 LS838_RS07955 c166c1c922db8848ab02c46e6aed16a9 411 SUPERFAMILY SSF103473 3 402 1.29E-52 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS07955 c166c1c922db8848ab02c46e6aed16a9 411 Pfam PF07690 Major Facilitator Superfamily 12 362 2.5E-35 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LS838_RS02580 2f3f3dc2df9570669d40cfeae9e0b6ed 460 Gene3D G3DSA:2.40.50.140 6 77 1.0E-21 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS02580 2f3f3dc2df9570669d40cfeae9e0b6ed 460 Gene3D G3DSA:3.40.50.150 257 457 3.0E-56 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS02580 2f3f3dc2df9570669d40cfeae9e0b6ed 460 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 390 421 - T 09-03-2017 IPR030390 RNA methyltransferase TrmA, active site LS838_RS02580 2f3f3dc2df9570669d40cfeae9e0b6ed 460 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 96 453 1.4E-16 T 09-03-2017 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 LS838_RS02580 2f3f3dc2df9570669d40cfeae9e0b6ed 460 SUPERFAMILY SSF50249 4 66 1.2E-13 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS02580 2f3f3dc2df9570669d40cfeae9e0b6ed 460 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 23 449 1.8E-107 T 09-03-2017 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 LS838_RS02580 2f3f3dc2df9570669d40cfeae9e0b6ed 460 SUPERFAMILY SSF53335 75 456 1.41E-59 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS02580 2f3f3dc2df9570669d40cfeae9e0b6ed 460 Pfam PF01938 TRAM domain 18 66 1.1E-10 T 09-03-2017 IPR002792 TRAM domain LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 Gene3D G3DSA:3.30.565.10 21 232 1.1E-90 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 Pfam PF00204 DNA gyrase B 240 409 1.3E-62 T 09-03-2017 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 Pfam PF01751 Toprim domain 438 549 9.5E-18 T 09-03-2017 IPR006171 Toprim domain LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 48 190 2.0E-21 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 21 652 4.7E-289 T 09-03-2017 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 SMART SM00387 46 192 2.2E-22 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 582 642 4.2E-26 T 09-03-2017 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 18 653 86.031 T 09-03-2017 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 PRINTS PR00418 DNA topoisomerase II family signature 505 521 3.3E-69 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 PRINTS PR00418 DNA topoisomerase II family signature 85 98 3.3E-69 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 PRINTS PR00418 DNA topoisomerase II family signature 543 555 3.3E-69 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 PRINTS PR00418 DNA topoisomerase II family signature 585 601 3.3E-69 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 PRINTS PR00418 DNA topoisomerase II family signature 128 142 3.3E-69 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 PRINTS PR00418 DNA topoisomerase II family signature 287 300 3.3E-69 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 PRINTS PR00418 DNA topoisomerase II family signature 523 540 3.3E-69 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 PRINTS PR00418 DNA topoisomerase II family signature 50 65 3.3E-69 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 PRINTS PR00418 DNA topoisomerase II family signature 439 453 3.3E-69 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 SUPERFAMILY SSF54211 240 410 2.28E-58 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 SUPERFAMILY SSF56719 413 645 1.67E-83 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 Gene3D G3DSA:3.30.230.10 239 411 1.3E-70 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 ProSitePatterns PS00177 DNA topoisomerase II signature. 441 449 - T 09-03-2017 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 PRINTS PR01159 DNA gyrase subunit B signature 489 498 3.2E-63 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 PRINTS PR01159 DNA gyrase subunit B signature 198 213 3.2E-63 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 PRINTS PR01159 DNA gyrase subunit B signature 331 347 3.2E-63 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 PRINTS PR01159 DNA gyrase subunit B signature 622 638 3.2E-63 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 PRINTS PR01159 DNA gyrase subunit B signature 393 413 3.2E-63 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 PRINTS PR01159 DNA gyrase subunit B signature 239 261 3.2E-63 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 PRINTS PR01159 DNA gyrase subunit B signature 379 393 3.2E-63 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 PRINTS PR01159 DNA gyrase subunit B signature 213 226 3.2E-63 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 PRINTS PR01159 DNA gyrase subunit B signature 21 31 3.2E-63 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 SUPERFAMILY SSF55874 20 234 6.29E-71 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 SMART SM00433 50 646 0.0 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS00025 09616c6eff5b156e39aac0862d3e5c25 653 Gene3D G3DSA:3.40.50.670 423 634 7.0E-89 T 09-03-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS09755 ec1925263a64c29a809cf9c7c6cafc1e 81 Gene3D G3DSA:2.10.260.10 7 74 7.0E-4 T 09-03-2017 LS838_RS02000 4c78d958ac8d5bc931c2ba2668e8db35 131 SUPERFAMILY SSF54211 7 131 6.07E-49 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LS838_RS02000 4c78d958ac8d5bc931c2ba2668e8db35 131 Gene3D G3DSA:3.30.230.10 6 131 7.0E-52 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LS838_RS02000 4c78d958ac8d5bc931c2ba2668e8db35 131 ProSitePatterns PS00360 Ribosomal protein S9 signature. 70 88 - T 09-03-2017 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 LS838_RS02000 4c78d958ac8d5bc931c2ba2668e8db35 131 Pfam PF00380 Ribosomal protein S9/S16 11 131 2.3E-49 T 09-03-2017 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 LS838_RS02000 4c78d958ac8d5bc931c2ba2668e8db35 131 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 2 131 34.322 T 09-03-2017 IPR023035 Ribosomal protein S9, bacterial/plastid LS838_RS05745 527e851618b686a0b1f2c192af558a16 98 SUPERFAMILY SSF141868 33 74 9.81E-9 T 09-03-2017 IPR001633 EAL domain LS838_RS05745 527e851618b686a0b1f2c192af558a16 98 Gene3D G3DSA:3.20.20.450 33 72 9.4E-7 T 09-03-2017 IPR001633 EAL domain LS838_RS05745 527e851618b686a0b1f2c192af558a16 98 Pfam PF00563 EAL domain 34 73 8.9E-7 T 09-03-2017 IPR001633 EAL domain LS838_RS01405 0b7700ec9fac7961ff534150c36ab345 490 SUPERFAMILY SSF51445 2 40 1.32E-153 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS01405 0b7700ec9fac7961ff534150c36ab345 490 SUPERFAMILY SSF51445 78 487 1.32E-153 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS01405 0b7700ec9fac7961ff534150c36ab345 490 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 09-03-2017 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site LS838_RS01405 0b7700ec9fac7961ff534150c36ab345 490 PRINTS PR00131 Glycosyl hydrolase family 1 signature 386 394 3.7E-14 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LS838_RS01405 0b7700ec9fac7961ff534150c36ab345 490 PRINTS PR00131 Glycosyl hydrolase family 1 signature 427 444 3.7E-14 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LS838_RS01405 0b7700ec9fac7961ff534150c36ab345 490 PRINTS PR00131 Glycosyl hydrolase family 1 signature 406 417 3.7E-14 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LS838_RS01405 0b7700ec9fac7961ff534150c36ab345 490 PRINTS PR00131 Glycosyl hydrolase family 1 signature 321 335 3.7E-14 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LS838_RS01405 0b7700ec9fac7961ff534150c36ab345 490 PRINTS PR00131 Glycosyl hydrolase family 1 signature 452 464 3.7E-14 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LS838_RS01405 0b7700ec9fac7961ff534150c36ab345 490 Gene3D G3DSA:3.20.20.80 3 487 5.0E-140 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS01405 0b7700ec9fac7961ff534150c36ab345 490 Pfam PF00232 Glycosyl hydrolase family 1 3 487 1.9E-123 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LS838_RS06075 c0ed48d1102dd3f028cac40e061692c7 167 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 3 166 23.415 T 09-03-2017 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 LS838_RS06075 c0ed48d1102dd3f028cac40e061692c7 167 Pfam PF01782 RimM N-terminal domain 6 86 4.7E-26 T 09-03-2017 IPR002676 RimM protein GO:0006364 LS838_RS06075 c0ed48d1102dd3f028cac40e061692c7 167 Pfam PF05239 PRC-barrel domain 93 166 4.1E-9 T 09-03-2017 IPR027275 PRC-barrel domain LS838_RS06075 c0ed48d1102dd3f028cac40e061692c7 167 Gene3D G3DSA:2.30.30.240 95 166 2.9E-21 T 09-03-2017 LS838_RS06075 c0ed48d1102dd3f028cac40e061692c7 167 Gene3D G3DSA:2.40.30.60 3 86 5.1E-20 T 09-03-2017 IPR002676 RimM protein GO:0006364 LS838_RS06075 c0ed48d1102dd3f028cac40e061692c7 167 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 4 166 6.1E-47 T 09-03-2017 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 LS838_RS06075 c0ed48d1102dd3f028cac40e061692c7 167 SUPERFAMILY SSF50346 95 166 6.28E-17 T 09-03-2017 IPR011033 PRC-barrel-like LS838_RS06075 c0ed48d1102dd3f028cac40e061692c7 167 SUPERFAMILY SSF50447 2 86 2.24E-21 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain LS838_RS08450 47cf7b7dc1330f4703bebca2b2b44022 189 Gene3D G3DSA:3.40.50.1110 1 188 7.2E-31 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain LS838_RS08450 47cf7b7dc1330f4703bebca2b2b44022 189 SUPERFAMILY SSF52266 2 187 4.79E-32 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain LS838_RS08450 47cf7b7dc1330f4703bebca2b2b44022 189 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 6 173 3.5E-19 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain LS838_RS03885 d564267f6fad893ced097aba1ee39644 301 Pfam PF03466 LysR substrate binding domain 88 292 1.4E-33 T 09-03-2017 IPR005119 LysR, substrate-binding LS838_RS03885 d564267f6fad893ced097aba1ee39644 301 Gene3D G3DSA:1.10.10.10 1 85 1.3E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS03885 d564267f6fad893ced097aba1ee39644 301 Gene3D G3DSA:3.40.190.10 88 179 3.6E-17 T 09-03-2017 LS838_RS03885 d564267f6fad893ced097aba1ee39644 301 SUPERFAMILY SSF53850 88 296 6.92E-31 T 09-03-2017 LS838_RS03885 d564267f6fad893ced097aba1ee39644 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.3E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS03885 d564267f6fad893ced097aba1ee39644 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.3E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS03885 d564267f6fad893ced097aba1ee39644 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.3E-10 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS03885 d564267f6fad893ced097aba1ee39644 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.6E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS03885 d564267f6fad893ced097aba1ee39644 301 Gene3D G3DSA:3.40.190.10 180 263 2.0E-19 T 09-03-2017 LS838_RS03885 d564267f6fad893ced097aba1ee39644 301 SUPERFAMILY SSF46785 1 84 5.7E-21 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS05810 386a66c5f3c565fd7d2411c5485a2b47 284 SUPERFAMILY SSF53850 84 281 1.9E-30 T 09-03-2017 LS838_RS05810 386a66c5f3c565fd7d2411c5485a2b47 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS05810 386a66c5f3c565fd7d2411c5485a2b47 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS05810 386a66c5f3c565fd7d2411c5485a2b47 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-9 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS05810 386a66c5f3c565fd7d2411c5485a2b47 284 Gene3D G3DSA:3.40.190.10 90 185 2.1E-17 T 09-03-2017 LS838_RS05810 386a66c5f3c565fd7d2411c5485a2b47 284 Pfam PF03466 LysR substrate binding domain 88 281 1.9E-31 T 09-03-2017 IPR005119 LysR, substrate-binding LS838_RS05810 386a66c5f3c565fd7d2411c5485a2b47 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 7.0E-21 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS05810 386a66c5f3c565fd7d2411c5485a2b47 284 Gene3D G3DSA:1.10.10.10 1 82 1.8E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS05810 386a66c5f3c565fd7d2411c5485a2b47 284 Gene3D G3DSA:3.40.190.10 186 247 2.4E-12 T 09-03-2017 LS838_RS05810 386a66c5f3c565fd7d2411c5485a2b47 284 SUPERFAMILY SSF46785 1 86 6.73E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS00055 50fb089008ba64e4aff9a961e168403d 151 SUPERFAMILY SSF55658 1 56 2.62E-16 T 09-03-2017 IPR009027 Ribosomal protein L9/RNase H1, N-terminal LS838_RS00055 50fb089008ba64e4aff9a961e168403d 151 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 3.4E-25 T 09-03-2017 IPR020069 Ribosomal protein L9, C-terminal LS838_RS00055 50fb089008ba64e4aff9a961e168403d 151 Gene3D G3DSA:3.40.5.10 1 49 1.8E-21 T 09-03-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS00055 50fb089008ba64e4aff9a961e168403d 151 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 09-03-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS00055 50fb089008ba64e4aff9a961e168403d 151 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 150 3.5E-40 T 09-03-2017 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS00055 50fb089008ba64e4aff9a961e168403d 151 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 150 23.418 T 09-03-2017 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS00055 50fb089008ba64e4aff9a961e168403d 151 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 1.4E-20 T 09-03-2017 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS00055 50fb089008ba64e4aff9a961e168403d 151 Gene3D G3DSA:3.10.430.100 61 150 3.0E-26 T 09-03-2017 IPR020069 Ribosomal protein L9, C-terminal LS838_RS00055 50fb089008ba64e4aff9a961e168403d 151 SUPERFAMILY SSF55653 57 150 2.22E-23 T 09-03-2017 IPR020069 Ribosomal protein L9, C-terminal LS838_RS08960 c1385299d32d1a5a55299a5c66eab1af 348 SUPERFAMILY SSF51735 101 300 5.32E-43 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS08960 c1385299d32d1a5a55299a5c66eab1af 348 SUPERFAMILY SSF52283 2 133 2.46E-32 T 09-03-2017 LS838_RS08960 c1385299d32d1a5a55299a5c66eab1af 348 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 325 1.5E-21 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LS838_RS08960 c1385299d32d1a5a55299a5c66eab1af 348 Gene3D G3DSA:3.40.50.720 7 117 5.6E-25 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS08960 c1385299d32d1a5a55299a5c66eab1af 348 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 299 7.2E-43 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LS838_RS08960 c1385299d32d1a5a55299a5c66eab1af 348 Gene3D G3DSA:3.40.50.720 118 299 9.3E-46 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS08960 c1385299d32d1a5a55299a5c66eab1af 348 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 09-03-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LS838_RS02985 6250e1ef76782a80cce0979a0b73b512 270 Gene3D G3DSA:3.30.1240.10 87 181 1.7E-14 T 09-03-2017 LS838_RS02985 6250e1ef76782a80cce0979a0b73b512 270 SUPERFAMILY SSF56784 1 269 2.8E-66 T 09-03-2017 IPR023214 HAD-like domain LS838_RS02985 6250e1ef76782a80cce0979a0b73b512 270 Gene3D G3DSA:3.40.50.1000 1 76 4.1E-50 T 09-03-2017 IPR023214 HAD-like domain LS838_RS02985 6250e1ef76782a80cce0979a0b73b512 270 Gene3D G3DSA:3.40.50.1000 182 270 4.1E-50 T 09-03-2017 IPR023214 HAD-like domain LS838_RS02985 6250e1ef76782a80cce0979a0b73b512 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 265 5.0E-56 T 09-03-2017 IPR023214 HAD-like domain LS838_RS02985 6250e1ef76782a80cce0979a0b73b512 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 233 1.2E-27 T 09-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 LS838_RS02985 6250e1ef76782a80cce0979a0b73b512 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 265 7.8E-51 T 09-03-2017 IPR000150 Cof protein GO:0016787 LS838_RS04325 1d97b8af77b13ff23fcbd010d9deb31b 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 286 3.2E-28 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS04325 1d97b8af77b13ff23fcbd010d9deb31b 291 Gene3D G3DSA:1.10.3720.10 7 287 5.9E-38 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS04325 1d97b8af77b13ff23fcbd010d9deb31b 291 SUPERFAMILY SSF161098 8 279 4.49E-33 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS04325 1d97b8af77b13ff23fcbd010d9deb31b 291 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 9 284 3.0E-67 T 09-03-2017 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 LS838_RS04370 f981a840ecb8439dbaac016f4f5cd63e 183 Pfam PF00293 NUDIX domain 30 161 5.0E-20 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LS838_RS04370 f981a840ecb8439dbaac016f4f5cd63e 183 Gene3D G3DSA:3.90.79.10 1 169 2.1E-46 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LS838_RS04370 f981a840ecb8439dbaac016f4f5cd63e 183 SUPERFAMILY SSF55811 2 169 6.09E-32 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LS838_RS02950 fa55dfee09733059c4fb4d646b9ae426 362 Pfam PF08402 TOBE domain 273 342 8.0E-7 T 09-03-2017 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 LS838_RS02950 fa55dfee09733059c4fb4d646b9ae426 362 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS02950 fa55dfee09733059c4fb4d646b9ae426 362 Pfam PF00005 ABC transporter 20 162 8.5E-37 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS02950 fa55dfee09733059c4fb4d646b9ae426 362 SMART SM00382 29 212 5.8E-19 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS02950 fa55dfee09733059c4fb4d646b9ae426 362 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 35 304 3.2E-108 T 09-03-2017 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 LS838_RS02950 fa55dfee09733059c4fb4d646b9ae426 362 SUPERFAMILY SSF50331 238 342 1.05E-13 T 09-03-2017 IPR008995 Molybdate/tungstate binding, C-terminal LS838_RS02950 fa55dfee09733059c4fb4d646b9ae426 362 Gene3D G3DSA:3.40.50.300 2 235 1.3E-78 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02950 fa55dfee09733059c4fb4d646b9ae426 362 SUPERFAMILY SSF52540 3 244 9.22E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06360 239ac157296a0b1f7123ec86ab853652 193 Gene3D G3DSA:3.40.50.170 1 184 9.4E-61 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LS838_RS06360 239ac157296a0b1f7123ec86ab853652 193 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 2 187 29.169 T 09-03-2017 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 LS838_RS06360 239ac157296a0b1f7123ec86ab853652 193 Pfam PF00551 Formyl transferase 1 181 1.6E-48 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LS838_RS06360 239ac157296a0b1f7123ec86ab853652 193 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 1 185 1.6E-58 T 09-03-2017 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 LS838_RS06360 239ac157296a0b1f7123ec86ab853652 193 SUPERFAMILY SSF53328 1 184 6.67E-57 T 09-03-2017 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 LS838_RS08375 0ee5f390e6ef70596ca5121793b82d54 294 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 57 68 6.7E-15 T 09-03-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LS838_RS08375 0ee5f390e6ef70596ca5121793b82d54 294 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 102 116 6.7E-15 T 09-03-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LS838_RS08375 0ee5f390e6ef70596ca5121793b82d54 294 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 29 37 6.7E-15 T 09-03-2017 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LS838_RS08375 0ee5f390e6ef70596ca5121793b82d54 294 PIRSF PIRSF005539 1 294 1.3E-110 T 09-03-2017 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LS838_RS08375 0ee5f390e6ef70596ca5121793b82d54 294 Pfam PF00561 alpha/beta hydrolase fold 28 278 5.0E-36 T 09-03-2017 IPR000073 Alpha/beta hydrolase fold-1 LS838_RS08375 0ee5f390e6ef70596ca5121793b82d54 294 TIGRFAM TIGR01250 pro_imino_pep_2: proline-specific peptidase 3 290 1.8E-98 T 09-03-2017 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 LS838_RS08375 0ee5f390e6ef70596ca5121793b82d54 294 Gene3D G3DSA:3.40.50.1820 2 290 1.8E-58 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS08375 0ee5f390e6ef70596ca5121793b82d54 294 SUPERFAMILY SSF53474 5 290 1.45E-57 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS00580 8d1135a3c132279f8d5428f11840d995 408 SUPERFAMILY SSF103473 8 401 6.28E-80 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS00580 8d1135a3c132279f8d5428f11840d995 408 Gene3D G3DSA:1.20.1250.20 221 393 6.2E-24 T 09-03-2017 LS838_RS00580 8d1135a3c132279f8d5428f11840d995 408 Pfam PF07690 Major Facilitator Superfamily 21 271 2.6E-33 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LS838_RS00580 8d1135a3c132279f8d5428f11840d995 408 Gene3D G3DSA:1.20.1250.20 14 202 7.9E-32 T 09-03-2017 LS838_RS06505 059e26eaa59ba4a98af95537f4962483 391 Gene3D G3DSA:1.20.1250.20 210 385 7.1E-14 T 09-03-2017 LS838_RS06505 059e26eaa59ba4a98af95537f4962483 391 Gene3D G3DSA:1.20.1250.20 12 199 9.1E-30 T 09-03-2017 LS838_RS06505 059e26eaa59ba4a98af95537f4962483 391 SUPERFAMILY SSF103473 7 386 9.42E-49 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS06505 059e26eaa59ba4a98af95537f4962483 391 Pfam PF07690 Major Facilitator Superfamily 18 261 3.0E-22 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LS838_RS06505 059e26eaa59ba4a98af95537f4962483 391 Pfam PF07690 Major Facilitator Superfamily 273 382 5.1E-9 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LS838_RS04550 3903a76d5b404cf017ed594d61e26f10 154 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 9 42 5.1E-14 T 09-03-2017 IPR019933 DivIVA domain LS838_RS04550 3903a76d5b404cf017ed594d61e26f10 154 Pfam PF05103 DivIVA protein 9 140 4.5E-17 T 09-03-2017 IPR007793 DivIVA family LS838_RS02180 8e003f288098ea14f7750a0b0407cafa 308 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 3 305 1.3E-66 T 09-03-2017 IPR005218 Diacylglycerol/lipid kinase LS838_RS02180 8e003f288098ea14f7750a0b0407cafa 308 Pfam PF00781 Diacylglycerol kinase catalytic domain 5 131 5.9E-32 T 09-03-2017 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 LS838_RS02180 8e003f288098ea14f7750a0b0407cafa 308 SUPERFAMILY SSF111331 2 307 2.18E-71 T 09-03-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain LS838_RS02180 8e003f288098ea14f7750a0b0407cafa 308 Gene3D G3DSA:3.40.50.10330 44 98 6.9E-4 T 09-03-2017 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LS838_RS02180 8e003f288098ea14f7750a0b0407cafa 308 SMART SM00046 4 130 6.7E-5 T 09-03-2017 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 LS838_RS04385 b268a3e54ab8803f66fa6beb1ad788f3 272 Pfam PF00005 ABC transporter 31 173 4.6E-24 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS04385 b268a3e54ab8803f66fa6beb1ad788f3 272 SMART SM00382 32 217 2.6E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS04385 b268a3e54ab8803f66fa6beb1ad788f3 272 Gene3D G3DSA:3.40.50.300 5 231 1.0E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04385 b268a3e54ab8803f66fa6beb1ad788f3 272 SUPERFAMILY SSF52540 7 231 5.7E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03300 1f68b10c14a9c596c6974f3f8111b3bc 405 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 6 372 4.9E-118 T 09-03-2017 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 LS838_RS03300 1f68b10c14a9c596c6974f3f8111b3bc 405 Pfam PF02926 THUMP domain 59 163 6.7E-15 T 09-03-2017 IPR004114 THUMP domain GO:0003723 LS838_RS03300 1f68b10c14a9c596c6974f3f8111b3bc 405 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 405 164.784 T 09-03-2017 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 LS838_RS03300 1f68b10c14a9c596c6974f3f8111b3bc 405 Gene3D G3DSA:3.40.50.620 173 333 6.7E-53 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS03300 1f68b10c14a9c596c6974f3f8111b3bc 405 SUPERFAMILY SSF143437 3 173 3.01E-52 T 09-03-2017 LS838_RS03300 1f68b10c14a9c596c6974f3f8111b3bc 405 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 370 7.6E-62 T 09-03-2017 IPR020536 Thil, AANH domain GO:0004810 LS838_RS03300 1f68b10c14a9c596c6974f3f8111b3bc 405 SUPERFAMILY SSF52402 174 382 3.97E-49 T 09-03-2017 LS838_RS03300 1f68b10c14a9c596c6974f3f8111b3bc 405 SMART SM00981 74 165 5.0E-21 T 09-03-2017 IPR004114 THUMP domain GO:0003723 LS838_RS09870 e98acbabb85c688188e9df41079f328d 89 SUPERFAMILY SSF52540 2 82 5.72E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09870 e98acbabb85c688188e9df41079f328d 89 Gene3D G3DSA:3.40.50.300 2 84 4.9E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09680 fc28820ba57dc09eceadb892e449170b 346 SUPERFAMILY SSF56112 63 230 1.03E-33 T 09-03-2017 IPR011009 Protein kinase-like domain LS838_RS09680 fc28820ba57dc09eceadb892e449170b 346 Gene3D G3DSA:1.10.510.10 62 212 8.2E-30 T 09-03-2017 LS838_RS09680 fc28820ba57dc09eceadb892e449170b 346 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 116 128 - T 09-03-2017 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 LS838_RS09680 fc28820ba57dc09eceadb892e449170b 346 SMART SM00220 9 229 3.7E-10 T 09-03-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 LS838_RS09680 fc28820ba57dc09eceadb892e449170b 346 Pfam PF00069 Protein kinase domain 62 220 6.4E-26 T 09-03-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 LS838_RS07725 532d8527e82965241262484b8c32b9bc 226 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 134 220 2.0E-6 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LS838_RS07725 532d8527e82965241262484b8c32b9bc 226 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 101 1.7E-23 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LS838_RS07725 532d8527e82965241262484b8c32b9bc 226 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 09-03-2017 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 LS838_RS07725 532d8527e82965241262484b8c32b9bc 226 Gene3D G3DSA:3.40.50.1240 1 222 2.6E-48 T 09-03-2017 IPR029033 Histidine phosphatase superfamily LS838_RS07725 532d8527e82965241262484b8c32b9bc 226 SUPERFAMILY SSF53254 1 220 5.57E-44 T 09-03-2017 IPR029033 Histidine phosphatase superfamily LS838_RS07725 532d8527e82965241262484b8c32b9bc 226 SMART SM00855 4 181 2.2E-18 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LS838_RS05535 5c732117425a401f23771d5230f42bb4 734 Gene3D G3DSA:3.20.20.70 329 623 3.6E-54 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LS838_RS05535 5c732117425a401f23771d5230f42bb4 734 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 31 287 9.3E-86 T 09-03-2017 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LS838_RS05535 5c732117425a401f23771d5230f42bb4 734 ProSitePatterns PS00512 Alpha-galactosidase signature. 362 377 - T 09-03-2017 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LS838_RS05535 5c732117425a401f23771d5230f42bb4 734 Pfam PF02065 Melibiase 292 638 7.9E-166 T 09-03-2017 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LS838_RS05535 5c732117425a401f23771d5230f42bb4 734 PIRSF PIRSF005536 3 732 5.1E-299 T 09-03-2017 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LS838_RS05535 5c732117425a401f23771d5230f42bb4 734 PRINTS PR00743 Glycosyl hydrolase family 36 signature 333 347 1.1E-65 T 09-03-2017 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LS838_RS05535 5c732117425a401f23771d5230f42bb4 734 PRINTS PR00743 Glycosyl hydrolase family 36 signature 244 259 1.1E-65 T 09-03-2017 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LS838_RS05535 5c732117425a401f23771d5230f42bb4 734 PRINTS PR00743 Glycosyl hydrolase family 36 signature 295 315 1.1E-65 T 09-03-2017 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LS838_RS05535 5c732117425a401f23771d5230f42bb4 734 PRINTS PR00743 Glycosyl hydrolase family 36 signature 361 376 1.1E-65 T 09-03-2017 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LS838_RS05535 5c732117425a401f23771d5230f42bb4 734 PRINTS PR00743 Glycosyl hydrolase family 36 signature 411 433 1.1E-65 T 09-03-2017 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LS838_RS05535 5c732117425a401f23771d5230f42bb4 734 PRINTS PR00743 Glycosyl hydrolase family 36 signature 523 539 1.1E-65 T 09-03-2017 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LS838_RS05535 5c732117425a401f23771d5230f42bb4 734 PRINTS PR00743 Glycosyl hydrolase family 36 signature 469 484 1.1E-65 T 09-03-2017 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LS838_RS05535 5c732117425a401f23771d5230f42bb4 734 PRINTS PR00743 Glycosyl hydrolase family 36 signature 548 564 1.1E-65 T 09-03-2017 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LS838_RS05535 5c732117425a401f23771d5230f42bb4 734 SUPERFAMILY SSF51445 329 667 2.11E-106 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS05535 5c732117425a401f23771d5230f42bb4 734 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 652 729 1.5E-20 T 09-03-2017 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 LS838_RS01225 58c8b800f949899b724215d328aa03d6 205 SMART SM01207 9 184 2.5E-44 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 LS838_RS01225 58c8b800f949899b724215d328aa03d6 205 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 6 192 14.022 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 LS838_RS01225 58c8b800f949899b724215d328aa03d6 205 Pfam PF02660 Glycerol-3-phosphate acyltransferase 10 181 9.9E-36 T 09-03-2017 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 LS838_RS00885 15f3b35b62ac3a6140a25515765b65eb 255 Pfam PF00075 RNase H 95 248 6.8E-22 T 09-03-2017 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 LS838_RS00885 15f3b35b62ac3a6140a25515765b65eb 255 Gene3D G3DSA:3.30.420.10 91 254 8.4E-40 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS00885 15f3b35b62ac3a6140a25515765b65eb 255 SUPERFAMILY SSF53098 96 254 2.4E-33 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS00885 15f3b35b62ac3a6140a25515765b65eb 255 Pfam PF01693 Caulimovirus viroplasmin 2 45 1.2E-17 T 09-03-2017 IPR011320 Ribonuclease H1, N-terminal LS838_RS00885 15f3b35b62ac3a6140a25515765b65eb 255 Gene3D G3DSA:3.40.970.10 1 46 5.2E-20 T 09-03-2017 IPR011320 Ribonuclease H1, N-terminal LS838_RS00885 15f3b35b62ac3a6140a25515765b65eb 255 SUPERFAMILY SSF55658 2 45 1.05E-13 T 09-03-2017 IPR009027 Ribosomal protein L9/RNase H1, N-terminal LS838_RS00975 4d7d7142627577b6c25516cd606a6b32 551 SUPERFAMILY SSF51445 6 472 1.77E-123 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS00975 4d7d7142627577b6c25516cd606a6b32 551 SUPERFAMILY SSF51011 479 548 6.17E-7 T 09-03-2017 LS838_RS00975 4d7d7142627577b6c25516cd606a6b32 551 Gene3D G3DSA:3.20.20.80 177 478 1.5E-103 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS00975 4d7d7142627577b6c25516cd606a6b32 551 Gene3D G3DSA:3.20.20.80 5 106 1.5E-103 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS00975 4d7d7142627577b6c25516cd606a6b32 551 Pfam PF00128 Alpha amylase, catalytic domain 30 377 1.3E-90 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LS838_RS00975 4d7d7142627577b6c25516cd606a6b32 551 Gene3D G3DSA:2.60.40.1180 479 548 1.2E-11 T 09-03-2017 IPR013780 Glycosyl hydrolase, all-beta LS838_RS00975 4d7d7142627577b6c25516cd606a6b32 551 Gene3D G3DSA:3.90.400.10 107 176 1.1E-27 T 09-03-2017 LS838_RS00975 4d7d7142627577b6c25516cd606a6b32 551 SMART SM00642 15 420 1.8E-115 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LS838_RS08400 d368eb36ed009474fd1c74878869b7d3 276 SUPERFAMILY SSF51430 4 268 4.85E-81 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain LS838_RS08400 d368eb36ed009474fd1c74878869b7d3 276 Gene3D G3DSA:3.20.20.100 3 273 5.5E-92 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain LS838_RS08400 d368eb36ed009474fd1c74878869b7d3 276 Pfam PF00248 Aldo/keto reductase family 14 258 1.5E-41 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain LS838_RS08400 d368eb36ed009474fd1c74878869b7d3 276 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 122 139 - T 09-03-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LS838_RS08400 d368eb36ed009474fd1c74878869b7d3 276 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 38 55 - T 09-03-2017 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 LS838_RS08400 d368eb36ed009474fd1c74878869b7d3 276 PRINTS PR00069 Aldo-keto reductase signature 156 185 6.7E-43 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LS838_RS08400 d368eb36ed009474fd1c74878869b7d3 276 PRINTS PR00069 Aldo-keto reductase signature 90 108 6.7E-43 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LS838_RS08400 d368eb36ed009474fd1c74878869b7d3 276 PRINTS PR00069 Aldo-keto reductase signature 122 139 6.7E-43 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LS838_RS08400 d368eb36ed009474fd1c74878869b7d3 276 PRINTS PR00069 Aldo-keto reductase signature 34 58 6.7E-43 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LS838_RS08400 d368eb36ed009474fd1c74878869b7d3 276 PRINTS PR00069 Aldo-keto reductase signature 194 218 6.7E-43 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LS838_RS08400 d368eb36ed009474fd1c74878869b7d3 276 PIRSF PIRSF000097 1 275 1.1E-73 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LS838_RS07175 47eaf4585f29f5faa8ff4b93a0f74984 346 SUPERFAMILY SSF53067 9 128 1.49E-28 T 09-03-2017 LS838_RS07175 47eaf4585f29f5faa8ff4b93a0f74984 346 Gene3D G3DSA:3.30.420.40 8 164 1.2E-43 T 09-03-2017 LS838_RS07175 47eaf4585f29f5faa8ff4b93a0f74984 346 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 7 341 56.608 T 09-03-2017 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LS838_RS07175 47eaf4585f29f5faa8ff4b93a0f74984 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 103 122 7.1E-44 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LS838_RS07175 47eaf4585f29f5faa8ff4b93a0f74984 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 159 180 7.1E-44 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LS838_RS07175 47eaf4585f29f5faa8ff4b93a0f74984 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 136 148 7.1E-44 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LS838_RS07175 47eaf4585f29f5faa8ff4b93a0f74984 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 269 278 7.1E-44 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LS838_RS07175 47eaf4585f29f5faa8ff4b93a0f74984 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 10 23 7.1E-44 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LS838_RS07175 47eaf4585f29f5faa8ff4b93a0f74984 346 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 82 102 7.1E-44 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LS838_RS07175 47eaf4585f29f5faa8ff4b93a0f74984 346 Gene3D G3DSA:3.30.420.40 231 319 3.4E-5 T 09-03-2017 LS838_RS07175 47eaf4585f29f5faa8ff4b93a0f74984 346 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 10 314 3.1E-101 T 09-03-2017 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LS838_RS07175 47eaf4585f29f5faa8ff4b93a0f74984 346 Pfam PF00814 Glycoprotease family 30 314 1.8E-93 T 09-03-2017 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LS838_RS07175 47eaf4585f29f5faa8ff4b93a0f74984 346 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 9 321 6.1E-125 T 09-03-2017 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LS838_RS07175 47eaf4585f29f5faa8ff4b93a0f74984 346 SUPERFAMILY SSF53067 107 315 1.88E-38 T 09-03-2017 LS838_RS01570 9da3b9c5aab389d37302840e1c8af11d 660 Hamap MF_01228 Methionine--tRNA ligase [metG]. 4 520 48.452 T 09-03-2017 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LS838_RS01570 9da3b9c5aab389d37302840e1c8af11d 660 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 496 1.1E-169 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LS838_RS01570 9da3b9c5aab389d37302840e1c8af11d 660 Pfam PF01588 Putative tRNA binding domain 564 656 1.8E-21 T 09-03-2017 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 LS838_RS01570 9da3b9c5aab389d37302840e1c8af11d 660 SUPERFAMILY SSF52374 4 364 1.41E-108 T 09-03-2017 LS838_RS01570 9da3b9c5aab389d37302840e1c8af11d 660 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 525 656 2.8E-35 T 09-03-2017 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LS838_RS01570 9da3b9c5aab389d37302840e1c8af11d 660 Gene3D G3DSA:1.10.730.10 350 521 2.0E-49 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS01570 9da3b9c5aab389d37302840e1c8af11d 660 Pfam PF09334 tRNA synthetases class I (M) 8 373 6.4E-115 T 09-03-2017 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS01570 9da3b9c5aab389d37302840e1c8af11d 660 SUPERFAMILY SSF50249 557 659 3.18E-27 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS01570 9da3b9c5aab389d37302840e1c8af11d 660 Gene3D G3DSA:3.40.50.620 238 348 2.3E-76 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS01570 9da3b9c5aab389d37302840e1c8af11d 660 Gene3D G3DSA:3.40.50.620 5 116 2.3E-76 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS01570 9da3b9c5aab389d37302840e1c8af11d 660 Gene3D G3DSA:2.170.220.10 119 237 9.5E-47 T 09-03-2017 LS838_RS01570 9da3b9c5aab389d37302840e1c8af11d 660 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 17 26 - T 09-03-2017 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS01570 9da3b9c5aab389d37302840e1c8af11d 660 PRINTS PR01041 Methionyl-tRNA synthetase signature 236 247 4.8E-33 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LS838_RS01570 9da3b9c5aab389d37302840e1c8af11d 660 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 4.8E-33 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LS838_RS01570 9da3b9c5aab389d37302840e1c8af11d 660 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 4.8E-33 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LS838_RS01570 9da3b9c5aab389d37302840e1c8af11d 660 PRINTS PR01041 Methionyl-tRNA synthetase signature 361 372 4.8E-33 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LS838_RS01570 9da3b9c5aab389d37302840e1c8af11d 660 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 4.8E-33 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LS838_RS01570 9da3b9c5aab389d37302840e1c8af11d 660 PRINTS PR01041 Methionyl-tRNA synthetase signature 269 284 4.8E-33 T 09-03-2017 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 LS838_RS01570 9da3b9c5aab389d37302840e1c8af11d 660 Gene3D G3DSA:2.40.50.140 550 659 3.9E-34 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS01570 9da3b9c5aab389d37302840e1c8af11d 660 SUPERFAMILY SSF47323 363 572 3.36E-40 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS06030 ed99eb1ab79d865909ec1363b6be583d 286 SUPERFAMILY SSF53850 15 269 6.72E-60 T 09-03-2017 LS838_RS06030 ed99eb1ab79d865909ec1363b6be583d 286 SMART SM00062 46 270 1.9E-60 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LS838_RS06030 ed99eb1ab79d865909ec1363b6be583d 286 Gene3D G3DSA:3.40.190.10 128 230 7.5E-21 T 09-03-2017 LS838_RS06030 ed99eb1ab79d865909ec1363b6be583d 286 SMART SM00079 46 269 0.0025 T 09-03-2017 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LS838_RS06030 ed99eb1ab79d865909ec1363b6be583d 286 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 269 1.4E-51 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LS838_RS06030 ed99eb1ab79d865909ec1363b6be583d 286 Gene3D G3DSA:3.40.190.10 43 127 2.3E-34 T 09-03-2017 LS838_RS06030 ed99eb1ab79d865909ec1363b6be583d 286 Gene3D G3DSA:3.40.190.10 231 269 2.3E-34 T 09-03-2017 LS838_RS02360 bb2e1b102f277f5d311932c4447f56e0 189 Pfam PF09819 ABC-type cobalt transport system, permease component 12 137 1.5E-31 T 09-03-2017 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted LS838_RS02360 bb2e1b102f277f5d311932c4447f56e0 189 PIRSF PIRSF037394 1 189 7.3E-52 T 09-03-2017 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted LS838_RS05525 9b1873bce838c205b8774e61bf2e57f8 303 Gene3D G3DSA:3.40.50.1820 42 302 2.3E-54 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS05525 9b1873bce838c205b8774e61bf2e57f8 303 Pfam PF07859 alpha/beta hydrolase fold 75 269 5.7E-25 T 09-03-2017 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 LS838_RS05525 9b1873bce838c205b8774e61bf2e57f8 303 SUPERFAMILY SSF53474 41 301 3.5E-44 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS08315 4426cd9d64a8ab567a71e38f0fcfb87b 197 Pfam PF09335 SNARE associated Golgi protein 68 185 2.2E-21 T 09-03-2017 IPR032816 SNARE associated Golgi protein LS838_RS09170 8a08814e6c09a540484f450e3c0d8f25 179 SUPERFAMILY SSF52218 1 177 5.41E-35 T 09-03-2017 IPR029039 Flavoprotein-like domain LS838_RS09170 8a08814e6c09a540484f450e3c0d8f25 179 Gene3D G3DSA:3.40.50.360 1 175 4.2E-41 T 09-03-2017 IPR029039 Flavoprotein-like domain LS838_RS09170 8a08814e6c09a540484f450e3c0d8f25 179 Pfam PF03358 NADPH-dependent FMN reductase 1 143 1.3E-32 T 09-03-2017 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 LS838_RS07590 c9dd03d4dab557476413fea071e9450b 283 SUPERFAMILY SSF101852 171 277 1.57E-28 T 09-03-2017 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal LS838_RS07590 c9dd03d4dab557476413fea071e9450b 283 SUPERFAMILY SSF102522 5 168 3.4E-58 T 09-03-2017 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal LS838_RS07590 c9dd03d4dab557476413fea071e9450b 283 Gene3D G3DSA:2.40.30.90 170 277 3.9E-25 T 09-03-2017 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal LS838_RS07590 c9dd03d4dab557476413fea071e9450b 283 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 7 274 7.3E-73 T 09-03-2017 IPR002747 SAM-dependent chlorinase/fluorinase LS838_RS07590 c9dd03d4dab557476413fea071e9450b 283 PIRSF PIRSF006779 2 279 4.9E-96 T 09-03-2017 IPR002747 SAM-dependent chlorinase/fluorinase LS838_RS05240 493b76441565fa273afd5cf9a5c1f135 261 SUPERFAMILY SSF53098 7 183 2.39E-34 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS05240 493b76441565fa273afd5cf9a5c1f135 261 Gene3D G3DSA:3.40.50.10190 184 259 1.7E-13 T 09-03-2017 IPR001357 BRCT domain LS838_RS05240 493b76441565fa273afd5cf9a5c1f135 261 SMART SM00479 7 169 4.0E-23 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LS838_RS05240 493b76441565fa273afd5cf9a5c1f135 261 SUPERFAMILY SSF52113 185 259 2.78E-11 T 09-03-2017 IPR001357 BRCT domain LS838_RS05240 493b76441565fa273afd5cf9a5c1f135 261 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 186 251 4.0E-11 T 09-03-2017 IPR001357 BRCT domain LS838_RS05240 493b76441565fa273afd5cf9a5c1f135 261 Gene3D G3DSA:3.30.420.10 7 165 6.9E-34 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS05240 493b76441565fa273afd5cf9a5c1f135 261 Pfam PF00929 Exonuclease 10 155 2.0E-17 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LS838_RS03440 53a2a9f45998e460d4edcef2bcbe62d4 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 226 1.5E-40 T 09-03-2017 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 LS838_RS03440 53a2a9f45998e460d4edcef2bcbe62d4 232 SUPERFAMILY SSF53167 1 227 2.09E-58 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LS838_RS03440 53a2a9f45998e460d4edcef2bcbe62d4 232 Gene3D G3DSA:3.40.50.1580 1 229 4.8E-62 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LS838_RS03440 53a2a9f45998e460d4edcef2bcbe62d4 232 Pfam PF01048 Phosphorylase superfamily 2 227 2.7E-42 T 09-03-2017 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 LS838_RS07075 40550cbed82c3a2a3817c2d76a81700e 131 Gene3D G3DSA:3.30.1380.20 9 111 3.7E-11 T 09-03-2017 LS838_RS07075 40550cbed82c3a2a3817c2d76a81700e 131 Pfam PF10702 Protein of unknown function (DUF2507) 9 129 3.4E-41 T 09-03-2017 IPR019642 Protein of unknown function DUF2507 LS838_RS07075 40550cbed82c3a2a3817c2d76a81700e 131 SUPERFAMILY SSF111126 5 114 1.26E-21 T 09-03-2017 IPR024096 NO signalling/Golgi transport ligand-binding domain LS838_RS09855 0451715ab6680d293986df29dd931692 436 PIRSF PIRSF005353 1 436 2.0E-169 T 09-03-2017 IPR026033 Purine permease PbuG-like LS838_RS09855 0451715ab6680d293986df29dd931692 436 Pfam PF00860 Permease family 20 393 2.0E-47 T 09-03-2017 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 LS838_RS01305 99577b06a205ff36b94b210024baab7a 548 PIRSF PIRSF002741 1 548 1.1E-83 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LS838_RS01305 99577b06a205ff36b94b210024baab7a 548 Gene3D G3DSA:3.10.105.10 310 517 1.5E-39 T 09-03-2017 LS838_RS01305 99577b06a205ff36b94b210024baab7a 548 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 89 111 - T 09-03-2017 IPR023765 Solute-binding protein family 5, conserved site LS838_RS01305 99577b06a205ff36b94b210024baab7a 548 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 470 1.4E-67 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain LS838_RS01305 99577b06a205ff36b94b210024baab7a 548 Gene3D G3DSA:3.40.190.10 174 309 3.2E-37 T 09-03-2017 LS838_RS01305 99577b06a205ff36b94b210024baab7a 548 Gene3D G3DSA:3.90.76.10 73 173 2.0E-36 T 09-03-2017 LS838_RS01305 99577b06a205ff36b94b210024baab7a 548 SUPERFAMILY SSF53850 40 537 1.61E-104 T 09-03-2017 LS838_RS02650 8188063864f2e54f0def0002df2e45ed 249 PIRSF PIRSF029008 1 246 3.0E-55 T 09-03-2017 IPR008681 Negative regulator of genetic competence, MecA LS838_RS02650 8188063864f2e54f0def0002df2e45ed 249 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 239 6.3E-44 T 09-03-2017 IPR008681 Negative regulator of genetic competence, MecA LS838_RS09015 b110a897a2962a056f2a66da45e61e04 514 SUPERFAMILY SSF52540 303 510 6.32E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09015 b110a897a2962a056f2a66da45e61e04 514 Pfam PF00005 ABC transporter 340 467 9.0E-20 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS09015 b110a897a2962a056f2a66da45e61e04 514 Pfam PF00005 ABC transporter 20 188 6.5E-25 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS09015 b110a897a2962a056f2a66da45e61e04 514 Gene3D G3DSA:3.40.50.300 323 510 8.8E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09015 b110a897a2962a056f2a66da45e61e04 514 Pfam PF12848 ABC transporter 227 311 3.3E-21 T 09-03-2017 IPR032781 ABC-transporter extension domain LS838_RS09015 b110a897a2962a056f2a66da45e61e04 514 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS09015 b110a897a2962a056f2a66da45e61e04 514 Gene3D G3DSA:3.40.50.300 3 276 6.7E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09015 b110a897a2962a056f2a66da45e61e04 514 SMART SM00382 346 513 1.1E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS09015 b110a897a2962a056f2a66da45e61e04 514 SMART SM00382 28 233 7.6E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS09015 b110a897a2962a056f2a66da45e61e04 514 SUPERFAMILY SSF52540 13 238 1.18E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07970 266782281e582b8986fdd14d73decb01 1046 Gene3D G3DSA:3.30.870.10 168 285 1.7E-7 T 09-03-2017 LS838_RS07970 266782281e582b8986fdd14d73decb01 1046 Pfam PF04851 Type III restriction enzyme, res subunit 321 475 1.4E-32 T 09-03-2017 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 LS838_RS07970 266782281e582b8986fdd14d73decb01 1046 SUPERFAMILY SSF56024 143 285 3.14E-7 T 09-03-2017 LS838_RS07970 266782281e582b8986fdd14d73decb01 1046 Pfam PF13091 PLD-like domain 148 283 3.6E-12 T 09-03-2017 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 LS838_RS07970 266782281e582b8986fdd14d73decb01 1046 Gene3D G3DSA:3.40.50.300 313 479 3.4E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07970 266782281e582b8986fdd14d73decb01 1046 SMART SM00490 574 655 6.5E-12 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS07970 266782281e582b8986fdd14d73decb01 1046 Pfam PF11907 Domain of unknown function (DUF3427) 848 1037 8.6E-28 T 09-03-2017 IPR021835 Protein of unknown function DUF3427 LS838_RS07970 266782281e582b8986fdd14d73decb01 1046 SMART SM00487 318 510 5.8E-14 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LS838_RS07970 266782281e582b8986fdd14d73decb01 1046 Pfam PF00271 Helicase conserved C-terminal domain 556 654 1.7E-11 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS07970 266782281e582b8986fdd14d73decb01 1046 Gene3D G3DSA:3.40.50.300 559 671 1.5E-20 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07970 266782281e582b8986fdd14d73decb01 1046 SUPERFAMILY SSF52540 373 515 6.39E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07970 266782281e582b8986fdd14d73decb01 1046 SUPERFAMILY SSF52540 543 673 6.39E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04045 fe419e4456048162550eb52535f3ed11 168 PIRSF PIRSF006181 9 168 4.4E-53 T 09-03-2017 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC LS838_RS04045 fe419e4456048162550eb52535f3ed11 168 SUPERFAMILY SSF55826 12 166 2.49E-35 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LS838_RS04045 fe419e4456048162550eb52535f3ed11 168 Pfam PF04073 Aminoacyl-tRNA editing domain 50 158 7.0E-21 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LS838_RS04045 fe419e4456048162550eb52535f3ed11 168 Gene3D G3DSA:3.90.960.10 8 166 2.9E-43 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LS838_RS05530 0d5d3f84f9de106df10c9ebe9a31971b 285 SUPERFAMILY SSF55073 2 151 2.04E-33 T 09-03-2017 IPR029787 Nucleotide cyclase LS838_RS05530 0d5d3f84f9de106df10c9ebe9a31971b 285 Gene3D G3DSA:3.30.450.20 170 268 2.3E-7 T 09-03-2017 LS838_RS05530 0d5d3f84f9de106df10c9ebe9a31971b 285 SMART SM00267 2 149 1.4E-14 T 09-03-2017 IPR000160 GGDEF domain LS838_RS05530 0d5d3f84f9de106df10c9ebe9a31971b 285 Gene3D G3DSA:3.30.70.270 2 155 8.7E-35 T 09-03-2017 LS838_RS05530 0d5d3f84f9de106df10c9ebe9a31971b 285 Pfam PF00990 Diguanylate cyclase, GGDEF domain 2 143 1.6E-29 T 09-03-2017 IPR000160 GGDEF domain LS838_RS05530 0d5d3f84f9de106df10c9ebe9a31971b 285 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 25 147 1.0E-26 T 09-03-2017 IPR000160 GGDEF domain LS838_RS03610 ec815ee2d27e083197bdbe345972835d 162 Pfam PF00186 Dihydrofolate reductase 1 160 1.2E-52 T 09-03-2017 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 LS838_RS03610 ec815ee2d27e083197bdbe345972835d 162 PRINTS PR00070 Dihydrofolate reductase signature 40 51 8.6E-12 T 09-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 LS838_RS03610 ec815ee2d27e083197bdbe345972835d 162 PRINTS PR00070 Dihydrofolate reductase signature 92 106 8.6E-12 T 09-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 LS838_RS03610 ec815ee2d27e083197bdbe345972835d 162 PRINTS PR00070 Dihydrofolate reductase signature 27 35 8.6E-12 T 09-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 LS838_RS03610 ec815ee2d27e083197bdbe345972835d 162 PRINTS PR00070 Dihydrofolate reductase signature 13 23 8.6E-12 T 09-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 LS838_RS03610 ec815ee2d27e083197bdbe345972835d 162 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 09-03-2017 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-113510|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-69205 LS838_RS03610 ec815ee2d27e083197bdbe345972835d 162 Gene3D G3DSA:3.40.430.10 1 161 6.0E-49 T 09-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 LS838_RS03610 ec815ee2d27e083197bdbe345972835d 162 SUPERFAMILY SSF53597 1 161 1.51E-49 T 09-03-2017 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 LS838_RS03610 ec815ee2d27e083197bdbe345972835d 162 PIRSF PIRSF000194 1 162 2.0E-47 T 09-03-2017 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 LS838_RS08755 92430443be8dcf1c7324a5dd60c84fe9 345 Gene3D G3DSA:3.90.25.10 186 333 1.7E-59 T 09-03-2017 LS838_RS08755 92430443be8dcf1c7324a5dd60c84fe9 345 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 309 1.9E-94 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS08755 92430443be8dcf1c7324a5dd60c84fe9 345 SUPERFAMILY SSF51735 1 336 2.36E-100 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS08755 92430443be8dcf1c7324a5dd60c84fe9 345 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 323 1.3E-151 T 09-03-2017 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 LS838_RS08755 92430443be8dcf1c7324a5dd60c84fe9 345 Gene3D G3DSA:3.40.50.720 1 185 1.0E-68 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS07485 8efc86cc437bb272d35534fb84f2333f 341 Pfam PF03601 Conserved hypothetical protein 698 9 320 1.5E-85 T 09-03-2017 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 LS838_RS02720 dc870b5a574425babbdce474aa05f27a 788 SUPERFAMILY SSF52540 397 694 1.22E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02720 dc870b5a574425babbdce474aa05f27a 788 Pfam PF09397 Ftsk gamma domain 722 781 6.1E-30 T 09-03-2017 IPR018541 FtsK gamma domain LS838_RS02720 dc870b5a574425babbdce474aa05f27a 788 Pfam PF01580 FtsK/SpoIIIE family 427 621 8.1E-56 T 09-03-2017 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 LS838_RS02720 dc870b5a574425babbdce474aa05f27a 788 Gene3D G3DSA:3.40.50.300 397 687 4.1E-79 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02720 dc870b5a574425babbdce474aa05f27a 788 SUPERFAMILY SSF46785 719 785 2.99E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS02720 dc870b5a574425babbdce474aa05f27a 788 SMART SM00843 719 784 8.6E-42 T 09-03-2017 IPR018541 FtsK gamma domain LS838_RS05955 3b7e19c8f5a404a2cff6a234009bee58 241 Pfam PF00696 Amino acid kinase family 7 217 7.6E-27 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase LS838_RS05955 3b7e19c8f5a404a2cff6a234009bee58 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 5.9E-97 T 09-03-2017 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 LS838_RS05955 3b7e19c8f5a404a2cff6a234009bee58 241 SUPERFAMILY SSF53633 4 239 7.72E-72 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase LS838_RS05955 3b7e19c8f5a404a2cff6a234009bee58 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 238 42.863 T 09-03-2017 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 LS838_RS05955 3b7e19c8f5a404a2cff6a234009bee58 241 Gene3D G3DSA:3.40.1160.10 3 237 6.2E-86 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase LS838_RS05955 3b7e19c8f5a404a2cff6a234009bee58 241 PIRSF PIRSF005650 1 241 1.5E-93 T 09-03-2017 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 LS838_RS07460 9ba9047d38aee6933e3f54bcd5400d1a 474 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 24 35 6.4E-30 T 09-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LS838_RS07460 9ba9047d38aee6933e3f54bcd5400d1a 474 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 225 246 6.4E-30 T 09-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LS838_RS07460 9ba9047d38aee6933e3f54bcd5400d1a 474 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 6.4E-30 T 09-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LS838_RS07460 9ba9047d38aee6933e3f54bcd5400d1a 474 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 194 212 6.4E-30 T 09-03-2017 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 LS838_RS07460 9ba9047d38aee6933e3f54bcd5400d1a 474 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 473 1.1E-178 T 09-03-2017 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 LS838_RS07460 9ba9047d38aee6933e3f54bcd5400d1a 474 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 474 38.33 T 09-03-2017 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 LS838_RS07460 9ba9047d38aee6933e3f54bcd5400d1a 474 Pfam PF09190 DALR domain 357 412 1.5E-10 T 09-03-2017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 LS838_RS07460 9ba9047d38aee6933e3f54bcd5400d1a 474 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 14 318 3.8E-133 T 09-03-2017 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 LS838_RS07460 9ba9047d38aee6933e3f54bcd5400d1a 474 Gene3D G3DSA:1.20.120.640 311 411 2.0E-18 T 09-03-2017 LS838_RS07460 9ba9047d38aee6933e3f54bcd5400d1a 474 SMART SM00840 357 418 3.4E-14 T 09-03-2017 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 LS838_RS07460 9ba9047d38aee6933e3f54bcd5400d1a 474 SUPERFAMILY SSF47323 334 473 4.71E-34 T 09-03-2017 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 LS838_RS07460 9ba9047d38aee6933e3f54bcd5400d1a 474 SUPERFAMILY SSF52374 2 319 4.1E-95 T 09-03-2017 LS838_RS07460 9ba9047d38aee6933e3f54bcd5400d1a 474 Gene3D G3DSA:3.40.50.620 19 310 2.3E-103 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS08080 5b7ab88c5e1d124615e660278cbb52ec 77 Pfam PF03840 Preprotein translocase SecG subunit 4 74 5.5E-17 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LS838_RS08080 5b7ab88c5e1d124615e660278cbb52ec 77 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.3E-7 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LS838_RS08080 5b7ab88c5e1d124615e660278cbb52ec 77 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 1.3E-7 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LS838_RS08080 5b7ab88c5e1d124615e660278cbb52ec 77 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.3E-7 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LS838_RS08080 5b7ab88c5e1d124615e660278cbb52ec 77 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 75 2.4E-19 T 09-03-2017 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 LS838_RS03510 9454de26d5c3d70a61fb86f1a62e7b35 183 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 117 123 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LS838_RS03510 9454de26d5c3d70a61fb86f1a62e7b35 183 Pfam PF03602 Conserved hypothetical protein 95 1 180 8.0E-55 T 09-03-2017 LS838_RS03510 9454de26d5c3d70a61fb86f1a62e7b35 183 Gene3D G3DSA:3.40.50.150 1 181 1.2E-57 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS03510 9454de26d5c3d70a61fb86f1a62e7b35 183 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 181 1.1E-47 T 09-03-2017 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS03510 9454de26d5c3d70a61fb86f1a62e7b35 183 PIRSF PIRSF004553 1 183 2.3E-48 T 09-03-2017 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS03510 9454de26d5c3d70a61fb86f1a62e7b35 183 SUPERFAMILY SSF53335 1 180 1.11E-45 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 Pfam PF03144 Elongation factor Tu domain 2 234 303 5.0E-15 T 09-03-2017 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 Pfam PF00679 Elongation factor G C-terminus 411 490 2.1E-25 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 Gene3D G3DSA:2.40.50.250 498 592 1.2E-36 T 09-03-2017 LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 SUPERFAMILY SSF50447 165 314 2.36E-33 T 09-03-2017 IPR009000 Translation protein, beta-barrel domain LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 Gene3D G3DSA:3.30.70.240 416 493 1.2E-34 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 Gene3D G3DSA:3.40.50.300 12 219 1.4E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 SMART SM00838 410 498 2.7E-7 T 09-03-2017 IPR000640 Translation elongation factor EFG, V domain LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 PRINTS PR00315 GTP-binding elongation factor signature 64 72 9.2E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 PRINTS PR00315 GTP-binding elongation factor signature 84 94 9.2E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 PRINTS PR00315 GTP-binding elongation factor signature 136 145 9.2E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 PRINTS PR00315 GTP-binding elongation factor signature 20 33 9.2E-13 T 09-03-2017 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 Gene3D G3DSA:2.40.30.10 220 317 2.0E-30 T 09-03-2017 LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 Pfam PF00009 Elongation factor Tu GTP binding domain 16 210 1.8E-53 T 09-03-2017 LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 SUPERFAMILY SSF54980 317 402 2.95E-14 T 09-03-2017 IPR009022 Elongation factor G, III-V domain LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 SUPERFAMILY SSF52540 10 222 4.13E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 SUPERFAMILY SSF54980 413 527 6.71E-28 T 09-03-2017 IPR009022 Elongation factor G, III-V domain LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 57 72 - T 09-03-2017 IPR031157 Tr-type G domain, conserved site LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 18 614 7.3E-276 T 09-03-2017 IPR006298 GTP-binding protein TypA GO:0005525 LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 17 167 3.1E-23 T 09-03-2017 IPR005225 Small GTP-binding protein domain GO:0005525 LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 Pfam PF14492 Elongation Factor G, domain II 344 391 6.7E-7 T 09-03-2017 IPR009022 Elongation factor G, III-V domain LS838_RS03495 3bfaf46e730df0b8009d4d2ee4f8063d 623 Gene3D G3DSA:3.30.70.870 318 415 3.3E-35 T 09-03-2017 LS838_RS03970 c392814b9645c36772c66adf79db480f 316 TIGRFAM TIGR03638 cas1_ECOLI: CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI 13 279 1.1E-111 T 09-03-2017 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype GO:0004520|GO:0043571|GO:0046872 LS838_RS03970 c392814b9645c36772c66adf79db480f 316 Pfam PF01867 CRISPR associated protein Cas1 29 127 1.8E-7 T 09-03-2017 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 LS838_RS03970 c392814b9645c36772c66adf79db480f 316 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 17 269 17.68 T 09-03-2017 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 LS838_RS06025 bad1387a3d265a3ecd79cea3cf7c5241 282 SUPERFAMILY SSF103481 39 137 1.03E-8 T 09-03-2017 LS838_RS06025 bad1387a3d265a3ecd79cea3cf7c5241 282 Pfam PF06800 Sugar transport protein 4 282 4.7E-88 T 09-03-2017 IPR010651 Sugar transport protein GO:0015144|GO:0016021|GO:0034219 LS838_RS06945 ac1b4b473c9fb4ba1c8f962139e2af24 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 259 284 8.8E-8 T 09-03-2017 LS838_RS06945 ac1b4b473c9fb4ba1c8f962139e2af24 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 132 156 8.8E-8 T 09-03-2017 LS838_RS06945 ac1b4b473c9fb4ba1c8f962139e2af24 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 294 318 8.8E-8 T 09-03-2017 LS838_RS06945 ac1b4b473c9fb4ba1c8f962139e2af24 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 102 122 8.8E-8 T 09-03-2017 LS838_RS06945 ac1b4b473c9fb4ba1c8f962139e2af24 482 PRINTS PR01036 Tetracycline resistance protein TetB signature 12 36 8.8E-8 T 09-03-2017 LS838_RS06945 ac1b4b473c9fb4ba1c8f962139e2af24 482 Gene3D G3DSA:1.20.1250.20 255 412 9.5E-20 T 09-03-2017 LS838_RS06945 ac1b4b473c9fb4ba1c8f962139e2af24 482 Gene3D G3DSA:1.20.1250.20 455 478 9.5E-20 T 09-03-2017 LS838_RS06945 ac1b4b473c9fb4ba1c8f962139e2af24 482 Gene3D G3DSA:1.20.1250.20 10 185 3.4E-35 T 09-03-2017 LS838_RS06945 ac1b4b473c9fb4ba1c8f962139e2af24 482 SUPERFAMILY SSF103473 1 197 3.53E-69 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS06945 ac1b4b473c9fb4ba1c8f962139e2af24 482 SUPERFAMILY SSF103473 241 411 3.53E-69 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS06945 ac1b4b473c9fb4ba1c8f962139e2af24 482 SUPERFAMILY SSF103473 454 479 3.53E-69 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS06945 ac1b4b473c9fb4ba1c8f962139e2af24 482 Pfam PF07690 Major Facilitator Superfamily 13 400 7.4E-58 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LS838_RS00665 24c576544d0538d963091c7e7a31ce57 396 Pfam PF13173 AAA domain 20 149 2.9E-38 T 09-03-2017 LS838_RS00665 24c576544d0538d963091c7e7a31ce57 396 SUPERFAMILY SSF52540 2 202 1.02E-22 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00665 24c576544d0538d963091c7e7a31ce57 396 Gene3D G3DSA:3.40.50.300 2 143 2.0E-12 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00665 24c576544d0538d963091c7e7a31ce57 396 Pfam PF13635 Domain of unknown function (DUF4143) 213 343 9.9E-12 T 09-03-2017 IPR025420 Domain of unknown function DUF4143 LS838_RS01695 b199c5da73c8097cbbb708093571bb73 431 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 304 22.845 T 09-03-2017 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LS838_RS01695 b199c5da73c8097cbbb708093571bb73 431 SUPERFAMILY SSF56037 350 409 6.28E-5 T 09-03-2017 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 LS838_RS01695 b199c5da73c8097cbbb708093571bb73 431 SMART SM00977 354 421 3.2E-4 T 09-03-2017 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LS838_RS01695 b199c5da73c8097cbbb708093571bb73 431 Gene3D G3DSA:3.40.50.620 21 182 1.1E-16 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS01695 b199c5da73c8097cbbb708093571bb73 431 Pfam PF01171 PP-loop family 22 200 1.8E-49 T 09-03-2017 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 LS838_RS01695 b199c5da73c8097cbbb708093571bb73 431 SUPERFAMILY SSF52402 21 228 1.9E-53 T 09-03-2017 LS838_RS01695 b199c5da73c8097cbbb708093571bb73 431 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 22 203 3.6E-52 T 09-03-2017 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 LS838_RS05405 3f4873d9619f51b95752e8e401b8b36a 189 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 141 160 4.0E-16 T 09-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LS838_RS05405 3f4873d9619f51b95752e8e401b8b36a 189 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 87 99 4.0E-16 T 09-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LS838_RS05405 3f4873d9619f51b95752e8e401b8b36a 189 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 39 55 4.0E-16 T 09-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LS838_RS05405 3f4873d9619f51b95752e8e401b8b36a 189 ProSitePatterns PS00761 Signal peptidases I signature 3. 146 159 - T 09-03-2017 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 LS838_RS05405 3f4873d9619f51b95752e8e401b8b36a 189 Gene3D G3DSA:2.10.109.10 36 97 6.6E-34 T 09-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain LS838_RS05405 3f4873d9619f51b95752e8e401b8b36a 189 Gene3D G3DSA:2.10.109.10 141 185 6.6E-34 T 09-03-2017 IPR028360 Peptidase S24/S26, beta-ribbon domain LS838_RS05405 3f4873d9619f51b95752e8e401b8b36a 189 Pfam PF00717 Peptidase S24-like 46 111 4.8E-18 T 09-03-2017 IPR019759 Peptidase S24/S26A/S26B LS838_RS05405 3f4873d9619f51b95752e8e401b8b36a 189 SUPERFAMILY SSF51306 38 185 4.19E-49 T 09-03-2017 IPR015927 Peptidase S24/S26A/S26B/S26C LS838_RS05405 3f4873d9619f51b95752e8e401b8b36a 189 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 24 181 4.8E-43 T 09-03-2017 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 LS838_RS07225 99659cd5c5e69285f2b53b127fb5a2af 78 Pfam PF10704 Protein of unknown function (DUF2508) 2 68 5.3E-16 T 09-03-2017 IPR019644 Protein of unknown function DUF2508 LS838_RS02910 1ef0d3f7052bd99544c653d4d214855c 188 SUPERFAMILY SSF55729 106 187 4.73E-27 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS02910 1ef0d3f7052bd99544c653d4d214855c 188 SUPERFAMILY SSF55729 1 78 4.73E-27 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS02910 1ef0d3f7052bd99544c653d4d214855c 188 Pfam PF00583 Acetyltransferase (GNAT) family 62 169 1.3E-14 T 09-03-2017 IPR000182 GNAT domain GO:0008080 LS838_RS02910 1ef0d3f7052bd99544c653d4d214855c 188 Gene3D G3DSA:3.40.630.30 1 187 1.2E-34 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS09605 dd083123b04ce35434c76ab591845512 165 SUPERFAMILY SSF54631 16 139 1.01E-25 T 09-03-2017 LS838_RS09605 dd083123b04ce35434c76ab591845512 165 Pfam PF00571 CBS domain 86 134 1.5E-5 T 09-03-2017 IPR000644 CBS domain LS838_RS09605 dd083123b04ce35434c76ab591845512 165 Gene3D G3DSA:3.10.580.10 10 149 3.2E-24 T 09-03-2017 LS838_RS01975 d00cbeafc7679e4af9bfddb12bf86b98 282 Pfam PF00005 ABC transporter 24 172 7.1E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS01975 d00cbeafc7679e4af9bfddb12bf86b98 282 Gene3D G3DSA:3.40.50.300 2 235 2.0E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01975 d00cbeafc7679e4af9bfddb12bf86b98 282 SUPERFAMILY SSF52540 4 236 2.46E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01975 d00cbeafc7679e4af9bfddb12bf86b98 282 SMART SM00382 32 220 2.1E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS01975 d00cbeafc7679e4af9bfddb12bf86b98 282 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 6 276 8.9E-114 T 09-03-2017 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 LS838_RS01975 d00cbeafc7679e4af9bfddb12bf86b98 282 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS02125 de190e329386378b45d994229a6b9b1e 172 SUPERFAMILY SSF52540 2 170 1.27E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02125 de190e329386378b45d994229a6b9b1e 172 Gene3D G3DSA:3.40.50.300 3 131 1.6E-24 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02125 de190e329386378b45d994229a6b9b1e 172 ProSitePatterns PS00211 ABC transporters family signature. 120 134 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS02125 de190e329386378b45d994229a6b9b1e 172 Pfam PF00005 ABC transporter 17 134 9.8E-16 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS04590 6068821f72a618a3951d4a1d5eff127a 351 SUPERFAMILY SSF52021 1 142 1.57E-43 T 09-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS04590 6068821f72a618a3951d4a1d5eff127a 351 Gene3D G3DSA:3.50.30.20 2 140 1.2E-41 T 09-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS04590 6068821f72a618a3951d4a1d5eff127a 351 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 209 223 6.0E-8 T 09-03-2017 LS838_RS04590 6068821f72a618a3951d4a1d5eff127a 351 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 170 184 6.0E-8 T 09-03-2017 LS838_RS04590 6068821f72a618a3951d4a1d5eff127a 351 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 240 256 6.0E-8 T 09-03-2017 LS838_RS04590 6068821f72a618a3951d4a1d5eff127a 351 Gene3D G3DSA:3.40.50.880 155 350 1.2E-31 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS04590 6068821f72a618a3951d4a1d5eff127a 351 SUPERFAMILY SSF52317 148 350 4.37E-27 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS04590 6068821f72a618a3951d4a1d5eff127a 351 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 130 1.2E-36 T 09-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS04590 6068821f72a618a3951d4a1d5eff127a 351 Pfam PF00117 Glutamine amidotransferase class-I 172 348 8.9E-12 T 09-03-2017 IPR017926 Glutamine amidotransferase LS838_RS04590 6068821f72a618a3951d4a1d5eff127a 351 SMART SM01097 1 131 7.4E-56 T 09-03-2017 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 LS838_RS09270 11fe83dcdebcd7831691e110a7cee9c6 281 PRINTS PR00624 Histone H5 signature 84 101 8.3E-7 T 09-03-2017 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 LS838_RS09270 11fe83dcdebcd7831691e110a7cee9c6 281 PRINTS PR00624 Histone H5 signature 161 175 8.3E-7 T 09-03-2017 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 LS838_RS09270 11fe83dcdebcd7831691e110a7cee9c6 281 PRINTS PR00624 Histone H5 signature 197 214 8.3E-7 T 09-03-2017 IPR005819 Histone H5 GO:0000786|GO:0003677|GO:0006334 LS838_RS01170 42f3e92404788478f0eff6eadda224c5 315 Gene3D G3DSA:1.25.40.10 41 188 7.8E-5 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 ProSitePatterns PS00177 DNA topoisomerase II signature. 425 433 - T 09-03-2017 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 Pfam PF00204 DNA gyrase B 222 392 1.9E-50 T 09-03-2017 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 SUPERFAMILY SSF54211 222 392 7.78E-49 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 PRINTS PR00418 DNA topoisomerase II family signature 527 539 3.1E-64 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 PRINTS PR00418 DNA topoisomerase II family signature 423 437 3.1E-64 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 PRINTS PR00418 DNA topoisomerase II family signature 112 126 3.1E-64 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 PRINTS PR00418 DNA topoisomerase II family signature 268 281 3.1E-64 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 PRINTS PR00418 DNA topoisomerase II family signature 507 524 3.1E-64 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 PRINTS PR00418 DNA topoisomerase II family signature 567 583 3.1E-64 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 PRINTS PR00418 DNA topoisomerase II family signature 70 83 3.1E-64 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 PRINTS PR00418 DNA topoisomerase II family signature 35 50 3.1E-64 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 PRINTS PR00418 DNA topoisomerase II family signature 489 505 3.1E-64 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 563 624 1.3E-27 T 09-03-2017 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 Gene3D G3DSA:3.30.230.10 221 392 2.0E-58 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 2.6E-21 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 Hamap MF_00939 DNA topoisomerase 4 subunit B [parE]. 4 633 45.954 T 09-03-2017 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 SUPERFAMILY SSF56719 398 628 2.88E-82 T 09-03-2017 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 Pfam PF01751 Toprim domain 422 531 2.5E-17 T 09-03-2017 IPR006171 Toprim domain LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 PRINTS PR01159 DNA gyrase subunit B signature 221 243 4.5E-51 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 PRINTS PR01159 DNA gyrase subunit B signature 376 396 4.5E-51 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 PRINTS PR01159 DNA gyrase subunit B signature 604 620 4.5E-51 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 PRINTS PR01159 DNA gyrase subunit B signature 6 16 4.5E-51 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 PRINTS PR01159 DNA gyrase subunit B signature 362 376 4.5E-51 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 PRINTS PR01159 DNA gyrase subunit B signature 196 209 4.5E-51 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 PRINTS PR01159 DNA gyrase subunit B signature 312 328 4.5E-51 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 PRINTS PR01159 DNA gyrase subunit B signature 588 600 4.5E-51 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 PRINTS PR01159 DNA gyrase subunit B signature 473 482 4.5E-51 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 PRINTS PR01159 DNA gyrase subunit B signature 181 196 4.5E-51 T 09-03-2017 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 SUPERFAMILY SSF55874 6 214 1.72E-63 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 SMART SM00387 31 176 1.1E-23 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 Gene3D G3DSA:3.40.50.670 408 616 1.1E-84 T 09-03-2017 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 Gene3D G3DSA:3.30.565.10 6 215 1.7E-85 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 TIGRFAM TIGR01058 parE_Gpos: DNA topoisomerase IV, B subunit 3 636 0.0 T 09-03-2017 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 LS838_RS04445 b0cee3f474659861ab0fd4812a6ceaad 643 SMART SM00433 35 628 0.0 T 09-03-2017 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 LS838_RS02380 c6d493a0a25b048d401b73fd6a3614be 279 SUPERFAMILY SSF53850 8 268 3.86E-63 T 09-03-2017 LS838_RS02380 c6d493a0a25b048d401b73fd6a3614be 279 SMART SM00062 45 269 2.1E-67 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LS838_RS02380 c6d493a0a25b048d401b73fd6a3614be 279 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 49 268 2.1E-53 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LS838_RS02380 c6d493a0a25b048d401b73fd6a3614be 279 Gene3D G3DSA:3.40.190.10 42 126 1.7E-35 T 09-03-2017 LS838_RS02380 c6d493a0a25b048d401b73fd6a3614be 279 Gene3D G3DSA:3.40.190.10 230 267 1.7E-35 T 09-03-2017 LS838_RS02380 c6d493a0a25b048d401b73fd6a3614be 279 Gene3D G3DSA:3.40.190.10 127 229 2.3E-24 T 09-03-2017 LS838_RS02380 c6d493a0a25b048d401b73fd6a3614be 279 SMART SM00079 54 268 0.0011 T 09-03-2017 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 LS838_RS08910 9fdf282b3a8f1f08c1bde68fa1b8ea65 258 PIRSF PIRSF016557 3 258 1.8E-102 T 09-03-2017 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 LS838_RS08910 9fdf282b3a8f1f08c1bde68fa1b8ea65 258 Gene3D G3DSA:3.20.20.140 3 64 4.3E-5 T 09-03-2017 LS838_RS08910 9fdf282b3a8f1f08c1bde68fa1b8ea65 258 SUPERFAMILY SSF89550 3 204 2.16E-12 T 09-03-2017 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 LS838_RS04940 1f685093515fb036188af37fa4e2bf07 181 Gene3D G3DSA:3.40.50.300 82 131 3.7E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04940 1f685093515fb036188af37fa4e2bf07 181 Gene3D G3DSA:1.20.1560.10 2 69 2.6E-4 T 09-03-2017 LS838_RS04940 1f685093515fb036188af37fa4e2bf07 181 SUPERFAMILY SSF52540 35 166 4.37E-9 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06815 359345cafc0977008fb4f469af704bac 309 Pfam PF13616 PPIC-type PPIASE domain 153 237 7.4E-15 T 09-03-2017 LS838_RS06815 359345cafc0977008fb4f469af704bac 309 Hamap MF_01145 Foldase protein PrsA [prsA]. 6 296 20.701 T 09-03-2017 IPR023059 Foldase protein PrsA GO:0003755 LS838_RS06815 359345cafc0977008fb4f469af704bac 309 Gene3D G3DSA:3.10.50.40 143 259 1.4E-23 T 09-03-2017 LS838_RS06815 359345cafc0977008fb4f469af704bac 309 SUPERFAMILY SSF54534 128 236 2.94E-21 T 09-03-2017 LS838_RS06815 359345cafc0977008fb4f469af704bac 309 SUPERFAMILY SSF109998 31 172 8.04E-12 T 09-03-2017 IPR027304 Trigger factor/SurA domain LS838_RS08310 e12fd3c70e44d1f1d41a3a0aaa3ca9dc 165 Gene3D G3DSA:3.40.630.30 2 139 1.3E-30 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS08310 e12fd3c70e44d1f1d41a3a0aaa3ca9dc 165 Pfam PF13302 Acetyltransferase (GNAT) domain 6 138 3.2E-24 T 09-03-2017 IPR000182 GNAT domain GO:0008080 LS838_RS08310 e12fd3c70e44d1f1d41a3a0aaa3ca9dc 165 SUPERFAMILY SSF55729 2 139 1.67E-30 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS03695 be72f8c3498523d0a64acc28d46c481d 316 Gene3D G3DSA:3.40.50.720 12 113 2.5E-31 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS03695 be72f8c3498523d0a64acc28d46c481d 316 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 146 173 - T 09-03-2017 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 LS838_RS03695 be72f8c3498523d0a64acc28d46c481d 316 Gene3D G3DSA:3.40.50.720 114 285 1.9E-63 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS03695 be72f8c3498523d0a64acc28d46c481d 316 SUPERFAMILY SSF52283 13 129 5.29E-28 T 09-03-2017 LS838_RS03695 be72f8c3498523d0a64acc28d46c481d 316 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 316 1.8E-24 T 09-03-2017 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 LS838_RS03695 be72f8c3498523d0a64acc28d46c481d 316 SUPERFAMILY SSF51735 100 285 1.25E-57 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS03695 be72f8c3498523d0a64acc28d46c481d 316 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 284 2.4E-59 T 09-03-2017 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 LS838_RS03695 be72f8c3498523d0a64acc28d46c481d 316 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 09-03-2017 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site LS838_RS06205 950f5f3e5110b9e474a5097696dc5093 668 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 131 143 - T 09-03-2017 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 LS838_RS06205 950f5f3e5110b9e474a5097696dc5093 668 SMART SM00220 12 272 1.4E-72 T 09-03-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 LS838_RS06205 950f5f3e5110b9e474a5097696dc5093 668 Gene3D G3DSA:1.10.510.10 79 263 7.8E-59 T 09-03-2017 LS838_RS06205 950f5f3e5110b9e474a5097696dc5093 668 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 18 41 - T 09-03-2017 IPR017441 Protein kinase, ATP binding site GO:0005524 LS838_RS06205 950f5f3e5110b9e474a5097696dc5093 668 Pfam PF00069 Protein kinase domain 12 259 1.3E-57 T 09-03-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 LS838_RS06205 950f5f3e5110b9e474a5097696dc5093 668 Gene3D G3DSA:3.30.200.20 3 78 4.0E-27 T 09-03-2017 LS838_RS06205 950f5f3e5110b9e474a5097696dc5093 668 SUPERFAMILY SSF56112 9 264 3.1E-84 T 09-03-2017 IPR011009 Protein kinase-like domain LS838_RS06205 950f5f3e5110b9e474a5097696dc5093 668 SMART SM00740 419 486 4.7E-16 T 09-03-2017 IPR005543 PASTA domain LS838_RS06205 950f5f3e5110b9e474a5097696dc5093 668 SMART SM00740 351 418 1.9E-17 T 09-03-2017 IPR005543 PASTA domain LS838_RS06205 950f5f3e5110b9e474a5097696dc5093 668 SMART SM00740 501 567 1.7E-18 T 09-03-2017 IPR005543 PASTA domain LS838_RS06205 950f5f3e5110b9e474a5097696dc5093 668 Pfam PF03793 PASTA domain 355 417 1.4E-15 T 09-03-2017 IPR005543 PASTA domain LS838_RS06205 950f5f3e5110b9e474a5097696dc5093 668 Pfam PF03793 PASTA domain 424 485 3.2E-14 T 09-03-2017 IPR005543 PASTA domain LS838_RS06205 950f5f3e5110b9e474a5097696dc5093 668 Pfam PF03793 PASTA domain 507 567 2.3E-17 T 09-03-2017 IPR005543 PASTA domain LS838_RS00135 f327e39308c5425e380e5c98dc472dcb 212 Gene3D G3DSA:3.40.50.300 4 210 1.1E-66 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00135 f327e39308c5425e380e5c98dc472dcb 212 SUPERFAMILY SSF52540 3 210 6.5E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00135 f327e39308c5425e380e5c98dc472dcb 212 Pfam PF00005 ABC transporter 19 161 6.3E-35 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS00135 f327e39308c5425e380e5c98dc472dcb 212 SMART SM00382 28 209 9.1E-11 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS00135 f327e39308c5425e380e5c98dc472dcb 212 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS03745 37348707aec6e5d65f70246f0865e211 636 Pfam PF00176 SNF2 family N-terminal domain 197 449 3.9E-19 T 09-03-2017 IPR000330 SNF2-related, N-terminal domain GO:0005524 LS838_RS03745 37348707aec6e5d65f70246f0865e211 636 SUPERFAMILY SSF52540 177 384 1.39E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03745 37348707aec6e5d65f70246f0865e211 636 SUPERFAMILY SSF52540 418 628 4.3E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03745 37348707aec6e5d65f70246f0865e211 636 SMART SM00487 175 373 1.5E-12 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LS838_RS03745 37348707aec6e5d65f70246f0865e211 636 Gene3D G3DSA:3.40.50.300 501 619 8.9E-10 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03745 37348707aec6e5d65f70246f0865e211 636 Pfam PF00271 Helicase conserved C-terminal domain 537 593 3.4E-5 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS03745 37348707aec6e5d65f70246f0865e211 636 Gene3D G3DSA:3.40.50.300 179 359 5.4E-15 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04425 6200328482cb543cca61e0cf54f34932 160 SMART SM00347 27 127 1.7E-16 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LS838_RS04425 6200328482cb543cca61e0cf54f34932 160 Pfam PF01047 MarR family 38 91 5.2E-15 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LS838_RS04425 6200328482cb543cca61e0cf54f34932 160 Gene3D G3DSA:1.10.10.10 3 139 1.1E-29 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS04425 6200328482cb543cca61e0cf54f34932 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 5.9E-13 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LS838_RS04425 6200328482cb543cca61e0cf54f34932 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 5.9E-13 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LS838_RS04425 6200328482cb543cca61e0cf54f34932 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 5.9E-13 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LS838_RS04425 6200328482cb543cca61e0cf54f34932 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 5.9E-13 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LS838_RS04425 6200328482cb543cca61e0cf54f34932 160 SUPERFAMILY SSF46785 6 138 1.6E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS05935 b39a9ac6ea8228d7f7474d65e1226a2c 415 Pfam PF13180 PDZ domain 200 263 1.6E-10 T 09-03-2017 IPR001478 PDZ domain GO:0005515 LS838_RS05935 b39a9ac6ea8228d7f7474d65e1226a2c 415 SMART SM00228 189 256 1.9E-7 T 09-03-2017 IPR001478 PDZ domain GO:0005515 LS838_RS05935 b39a9ac6ea8228d7f7474d65e1226a2c 415 Pfam PF02163 Peptidase family M50 6 400 1.8E-74 T 09-03-2017 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033 LS838_RS05935 b39a9ac6ea8228d7f7474d65e1226a2c 415 Gene3D G3DSA:2.30.42.10 166 266 1.1E-21 T 09-03-2017 IPR001478 PDZ domain GO:0005515 LS838_RS05935 b39a9ac6ea8228d7f7474d65e1226a2c 415 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 412 6.4E-81 T 09-03-2017 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 LS838_RS05935 b39a9ac6ea8228d7f7474d65e1226a2c 415 SUPERFAMILY SSF50156 202 278 3.68E-15 T 09-03-2017 IPR001478 PDZ domain GO:0005515 LS838_RS06210 212863a6cef72a5fc057fc7edde93876 251 Pfam PF13672 Protein phosphatase 2C 12 202 1.3E-18 T 09-03-2017 LS838_RS06210 212863a6cef72a5fc057fc7edde93876 251 SMART SM00332 1 241 2.1E-20 T 09-03-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LS838_RS06210 212863a6cef72a5fc057fc7edde93876 251 SUPERFAMILY SSF81606 2 241 5.1E-63 T 09-03-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LS838_RS06210 212863a6cef72a5fc057fc7edde93876 251 SMART SM00331 1 243 4.1E-34 T 09-03-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LS838_RS06210 212863a6cef72a5fc057fc7edde93876 251 Gene3D G3DSA:3.60.40.10 2 241 1.9E-67 T 09-03-2017 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 LS838_RS01015 48722eec71e4f8c7f45755b99342113c 1001 SUPERFAMILY SSF49785 853 997 9.92E-20 T 09-03-2017 IPR008979 Galactose-binding domain-like LS838_RS01015 48722eec71e4f8c7f45755b99342113c 1001 SUPERFAMILY SSF51445 227 510 2.0E-18 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS01015 48722eec71e4f8c7f45755b99342113c 1001 SUPERFAMILY SSF49265 778 860 4.58E-5 T 09-03-2017 IPR003961 Fibronectin type III GO:0005515 LS838_RS01015 48722eec71e4f8c7f45755b99342113c 1001 Pfam PF01055 Glycosyl hydrolases family 31 375 609 9.9E-43 T 09-03-2017 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 LS838_RS01015 48722eec71e4f8c7f45755b99342113c 1001 SUPERFAMILY SSF51011 515 606 8.63E-14 T 09-03-2017 LS838_RS01015 48722eec71e4f8c7f45755b99342113c 1001 Gene3D G3DSA:2.60.120.260 867 997 1.5E-18 T 09-03-2017 IPR008979 Galactose-binding domain-like LS838_RS01015 48722eec71e4f8c7f45755b99342113c 1001 SUPERFAMILY SSF74650 6 224 4.39E-32 T 09-03-2017 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 LS838_RS01015 48722eec71e4f8c7f45755b99342113c 1001 Pfam PF00754 F5/8 type C domain 871 989 2.9E-11 T 09-03-2017 IPR000421 Coagulation factor 5/8 C-terminal domain LS838_RS06860 8cb11ec14ba69d24f38270611c1b6b43 303 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 282 3.4E-91 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LS838_RS06860 8cb11ec14ba69d24f38270611c1b6b43 303 SUPERFAMILY SSF51569 6 283 6.96E-88 T 09-03-2017 LS838_RS06860 8cb11ec14ba69d24f38270611c1b6b43 303 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 4 282 7.3E-83 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LS838_RS06860 8cb11ec14ba69d24f38270611c1b6b43 303 PIRSF PIRSF001359 2 286 4.1E-98 T 09-03-2017 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 LS838_RS06860 8cb11ec14ba69d24f38270611c1b6b43 303 Gene3D G3DSA:3.20.20.70 3 283 3.6E-94 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LS838_RS01865 08cee1c91b9595c80a4736ff4421fac8 223 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 37.206 T 09-03-2017 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 LS838_RS01865 08cee1c91b9595c80a4736ff4421fac8 223 SMART SM00322 59 124 4.6E-10 T 09-03-2017 IPR004087 K Homology domain GO:0003676 LS838_RS01865 08cee1c91b9595c80a4736ff4421fac8 223 Gene3D G3DSA:3.30.300.20 17 106 9.4E-33 T 09-03-2017 IPR015946 K homology domain-like, alpha/beta LS838_RS01865 08cee1c91b9595c80a4736ff4421fac8 223 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 7.5E-90 T 09-03-2017 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 LS838_RS01865 08cee1c91b9595c80a4736ff4421fac8 223 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 09-03-2017 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01865 08cee1c91b9595c80a4736ff4421fac8 223 Gene3D G3DSA:3.30.1140.32 107 206 1.3E-40 T 09-03-2017 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01865 08cee1c91b9595c80a4736ff4421fac8 223 Pfam PF07650 KH domain 38 109 3.3E-22 T 09-03-2017 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01865 08cee1c91b9595c80a4736ff4421fac8 223 SUPERFAMILY SSF54814 2 105 4.45E-35 T 09-03-2017 IPR009019 K homology domain, prokaryotic type GO:0003723 LS838_RS01865 08cee1c91b9595c80a4736ff4421fac8 223 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 3.1E-36 T 09-03-2017 LS838_RS01865 08cee1c91b9595c80a4736ff4421fac8 223 SUPERFAMILY SSF54821 106 205 5.49E-37 T 09-03-2017 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS04010 7f5bcb522e6b6d0193d9ec980cc61097 301 Pfam PF01867 CRISPR associated protein Cas1 9 231 1.6E-16 T 09-03-2017 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 LS838_RS04010 7f5bcb522e6b6d0193d9ec980cc61097 301 TIGRFAM TIGR03639 cas1_NMENI: CRISPR-associated endonuclease Cas1, subtype II/NMENI 3 271 3.6E-70 T 09-03-2017 IPR019855 CRISPR-associated protein Cas1, NMENI subtype GO:0004520|GO:0043571|GO:0046872 LS838_RS07595 da0249a0083181a1d15a7cc8381cf24f 462 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 09-03-2017 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 LS838_RS07595 da0249a0083181a1d15a7cc8381cf24f 462 Pfam PF00324 Amino acid permease 19 449 7.8E-84 T 09-03-2017 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 LS838_RS07595 da0249a0083181a1d15a7cc8381cf24f 462 PIRSF PIRSF006060 1 461 3.9E-62 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LS838_RS07345 405e833e92953af2fb8c0a618d48d419 291 Gene3D G3DSA:3.30.420.40 109 290 2.6E-52 T 09-03-2017 LS838_RS07345 405e833e92953af2fb8c0a618d48d419 291 Pfam PF00480 ROK family 9 288 3.8E-63 T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 LS838_RS07345 405e833e92953af2fb8c0a618d48d419 291 Gene3D G3DSA:3.30.420.40 4 107 6.8E-34 T 09-03-2017 LS838_RS07345 405e833e92953af2fb8c0a618d48d419 291 SUPERFAMILY SSF53067 8 289 2.76E-39 T 09-03-2017 LS838_RS07905 cba1df4c138157d218e5b7d9105df92a 816 PIRSF PIRSF000460 1 815 3.0E-208 T 09-03-2017 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 LS838_RS07905 cba1df4c138157d218e5b7d9105df92a 816 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 19 806 0.0 T 09-03-2017 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 LS838_RS07905 cba1df4c138157d218e5b7d9105df92a 816 Gene3D G3DSA:3.40.50.2000 16 477 8.3E-173 T 09-03-2017 LS838_RS07905 cba1df4c138157d218e5b7d9105df92a 816 Pfam PF00343 Carbohydrate phosphorylase 106 806 3.2E-287 T 09-03-2017 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 LS838_RS07905 cba1df4c138157d218e5b7d9105df92a 816 SUPERFAMILY SSF53756 16 811 1.81E-274 T 09-03-2017 LS838_RS07905 cba1df4c138157d218e5b7d9105df92a 816 Gene3D G3DSA:3.40.50.2000 478 790 5.5E-115 T 09-03-2017 LS838_RS05720 75bfea68e4989a0b874db83fe3d8a57b 281 Gene3D G3DSA:3.40.50.10170 3 149 3.6E-49 T 09-03-2017 LS838_RS05720 75bfea68e4989a0b874db83fe3d8a57b 281 SUPERFAMILY SSF82549 2 280 6.28E-79 T 09-03-2017 LS838_RS05720 75bfea68e4989a0b874db83fe3d8a57b 281 Gene3D G3DSA:3.30.1180.10 156 281 1.6E-29 T 09-03-2017 LS838_RS05720 75bfea68e4989a0b874db83fe3d8a57b 281 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 280 5.1E-71 T 09-03-2017 IPR003797 DegV LS838_RS05720 75bfea68e4989a0b874db83fe3d8a57b 281 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 279 4.4E-87 T 09-03-2017 IPR003797 DegV LS838_RS02170 97923badafab58e8a4360f3f8a439e36 480 ProSitePatterns PS00571 Amidases signature. 143 174 - T 09-03-2017 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 LS838_RS02170 97923badafab58e8a4360f3f8a439e36 480 Pfam PF01425 Amidase 28 457 4.6E-146 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LS838_RS02170 97923badafab58e8a4360f3f8a439e36 480 Gene3D G3DSA:3.90.1300.10 3 474 1.7E-163 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LS838_RS02170 97923badafab58e8a4360f3f8a439e36 480 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 13 467 1.9E-179 T 09-03-2017 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LS838_RS02170 97923badafab58e8a4360f3f8a439e36 480 SUPERFAMILY SSF75304 1 474 1.57E-146 T 09-03-2017 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LS838_RS02170 97923badafab58e8a4360f3f8a439e36 480 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 469 87.494 T 09-03-2017 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 LS838_RS07340 6267ee58df0198e3416eeaf081c26395 541 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 81 103 - T 09-03-2017 IPR023765 Solute-binding protein family 5, conserved site LS838_RS07340 6267ee58df0198e3416eeaf081c26395 541 SUPERFAMILY SSF53850 32 539 1.16E-108 T 09-03-2017 LS838_RS07340 6267ee58df0198e3416eeaf081c26395 541 PIRSF PIRSF002741 1 541 5.9E-85 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LS838_RS07340 6267ee58df0198e3416eeaf081c26395 541 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 455 4.3E-67 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain LS838_RS07340 6267ee58df0198e3416eeaf081c26395 541 Gene3D G3DSA:3.10.105.10 288 509 8.0E-43 T 09-03-2017 LS838_RS07340 6267ee58df0198e3416eeaf081c26395 541 Gene3D G3DSA:3.90.76.10 43 216 1.2E-41 T 09-03-2017 LS838_RS03405 72d136eec0d779650fd5140804ddd6b3 148 Hamap MF_01197 Cell division protein SepF [sepF]. 1 141 19.161 T 09-03-2017 IPR023052 Cell division protein SepF GO:0090529 LS838_RS03405 72d136eec0d779650fd5140804ddd6b3 148 Pfam PF04472 Protein of unknown function (DUF552) 62 131 5.1E-26 T 09-03-2017 IPR007561 Cell division protein SepF/SepF-related GO:0090529 LS838_RS03130 e4dc32fd05990a1eeb0e4de703e3233b 740 Gene3D G3DSA:3.40.720.10 252 563 6.7E-37 T 09-03-2017 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 LS838_RS03130 e4dc32fd05990a1eeb0e4de703e3233b 740 SUPERFAMILY SSF53649 250 655 5.98E-65 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LS838_RS03130 e4dc32fd05990a1eeb0e4de703e3233b 740 PIRSF PIRSF005091 1 642 6.0E-190 T 09-03-2017 IPR012160 Lipoteichoic acid synthase-like LS838_RS03130 e4dc32fd05990a1eeb0e4de703e3233b 740 Pfam PF00884 Sulfatase 252 549 1.7E-34 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LS838_RS00200 c14055e52f2b84c2abb5a5f10197e6a5 70 SUPERFAMILY SSF46689 16 63 6.16E-6 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS09950 213a56a27eff7f40af5be44a9da92c43 46 Pfam PF00468 Ribosomal protein L34 3 46 1.0E-22 T 09-03-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS09950 213a56a27eff7f40af5be44a9da92c43 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 44 5.0E-15 T 09-03-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS09950 213a56a27eff7f40af5be44a9da92c43 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 3 46 14.798 T 09-03-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS09950 213a56a27eff7f40af5be44a9da92c43 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 4 23 - T 09-03-2017 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS09950 213a56a27eff7f40af5be44a9da92c43 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 46 3.8E-21 T 09-03-2017 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01320 ffc8a1818eeecebca1064a541278708d 347 SMART SM00382 34 233 2.1E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS01320 ffc8a1818eeecebca1064a541278708d 347 Pfam PF00005 ABC transporter 26 183 7.5E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS01320 ffc8a1818eeecebca1064a541278708d 347 Gene3D G3DSA:3.40.50.300 5 257 2.3E-78 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01320 ffc8a1818eeecebca1064a541278708d 347 SUPERFAMILY SSF52540 5 254 8.35E-72 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01320 ffc8a1818eeecebca1064a541278708d 347 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 316 1.8E-18 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LS838_RS01320 ffc8a1818eeecebca1064a541278708d 347 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 295 2.7E-13 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LS838_RS01320 ffc8a1818eeecebca1064a541278708d 347 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS09260 4b40d791aed9ac49009e1d10f69e9f6f 210 SUPERFAMILY SSF55469 3 209 2.88E-53 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 LS838_RS09260 4b40d791aed9ac49009e1d10f69e9f6f 210 Pfam PF00881 Nitroreductase family 10 188 1.5E-23 T 09-03-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 LS838_RS09260 4b40d791aed9ac49009e1d10f69e9f6f 210 Gene3D G3DSA:3.40.109.10 1 209 2.2E-55 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 LS838_RS04640 774b2a39a907092dd96522005edc02fd 207 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 192 1.5E-45 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LS838_RS04640 774b2a39a907092dd96522005edc02fd 207 Gene3D G3DSA:3.40.50.1240 1 202 6.1E-50 T 09-03-2017 IPR029033 Histidine phosphatase superfamily LS838_RS04640 774b2a39a907092dd96522005edc02fd 207 SMART SM00855 3 163 3.2E-17 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LS838_RS04640 774b2a39a907092dd96522005edc02fd 207 SUPERFAMILY SSF53254 1 199 3.67E-47 T 09-03-2017 IPR029033 Histidine phosphatase superfamily LS838_RS08640 142e6e9a40c639e0e4489e23e03779c8 1094 SUPERFAMILY SSF75005 271 746 4.45E-48 T 09-03-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain LS838_RS08640 142e6e9a40c639e0e4489e23e03779c8 1094 SUPERFAMILY SSF69360 773 970 2.28E-26 T 09-03-2017 LS838_RS08640 142e6e9a40c639e0e4489e23e03779c8 1094 Gene3D G3DSA:2.10.270.10 855 918 6.9E-20 T 09-03-2017 LS838_RS08640 142e6e9a40c639e0e4489e23e03779c8 1094 Gene3D G3DSA:2.20.120.10 919 962 5.6E-12 T 09-03-2017 LS838_RS08640 142e6e9a40c639e0e4489e23e03779c8 1094 Gene3D G3DSA:2.115.10.20 258 741 4.4E-129 T 09-03-2017 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain LS838_RS08640 142e6e9a40c639e0e4489e23e03779c8 1094 Pfam PF03217 Bacterial surface layer protein 979 1093 9.3E-22 T 09-03-2017 IPR024968 SLAP domain, Lactobacillus LS838_RS08640 142e6e9a40c639e0e4489e23e03779c8 1094 Gene3D G3DSA:2.10.270.10 776 854 3.2E-13 T 09-03-2017 LS838_RS08640 142e6e9a40c639e0e4489e23e03779c8 1094 Pfam PF02435 Levansucrase/Invertase 269 743 1.0E-89 T 09-03-2017 IPR003469 Glycoside hydrolase, family 68 GO:0009758|GO:0050053 LS838_RS08500 8377e4207c657b9d3b74bdeffb68c6a0 230 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 168 1.9E-30 T 09-03-2017 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 LS838_RS08500 8377e4207c657b9d3b74bdeffb68c6a0 230 SUPERFAMILY SSF51695 3 222 2.07E-54 T 09-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LS838_RS08500 8377e4207c657b9d3b74bdeffb68c6a0 230 Gene3D G3DSA:3.20.20.190 2 226 1.1E-57 T 09-03-2017 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 LS838_RS05880 12703bcea9bd496b9398e491449f34cc 349 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 1 71 3.7E-5 T 09-03-2017 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 LS838_RS05880 12703bcea9bd496b9398e491449f34cc 349 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 340 9.3E-96 T 09-03-2017 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 LS838_RS05880 12703bcea9bd496b9398e491449f34cc 349 SUPERFAMILY SSF46785 1 85 1.36E-23 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS05880 12703bcea9bd496b9398e491449f34cc 349 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 334 28.53 T 09-03-2017 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 LS838_RS05880 12703bcea9bd496b9398e491449f34cc 349 PIRSF PIRSF005485 1 345 2.3E-96 T 09-03-2017 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 LS838_RS05880 12703bcea9bd496b9398e491449f34cc 349 Gene3D G3DSA:3.30.450.40 178 344 1.0E-33 T 09-03-2017 IPR029016 GAF domain-like LS838_RS05880 12703bcea9bd496b9398e491449f34cc 349 Pfam PF01628 HrcA protein C terminal domain 104 327 4.3E-48 T 09-03-2017 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 LS838_RS05880 12703bcea9bd496b9398e491449f34cc 349 Gene3D G3DSA:1.10.10.10 1 81 5.1E-34 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS05880 12703bcea9bd496b9398e491449f34cc 349 SUPERFAMILY SSF55781 71 345 9.22E-60 T 09-03-2017 IPR029016 GAF domain-like LS838_RS09925 43143be42fc2ef8ffc19c18b5e7f8c11 616 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 423 442 - T 09-03-2017 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 LS838_RS09925 43143be42fc2ef8ffc19c18b5e7f8c11 616 TIGRFAM TIGR02720 pyruv_oxi_spxB: pyruvate oxidase 7 570 2.5E-217 T 09-03-2017 IPR014092 Pyruvate oxidase GO:0047112|GO:0055114 KEGG: 00620+1.2.3.3 LS838_RS09925 43143be42fc2ef8ffc19c18b5e7f8c11 616 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 386 533 3.4E-37 T 09-03-2017 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 LS838_RS09925 43143be42fc2ef8ffc19c18b5e7f8c11 616 SUPERFAMILY SSF52518 363 546 5.52E-53 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold LS838_RS09925 43143be42fc2ef8ffc19c18b5e7f8c11 616 SUPERFAMILY SSF52467 187 354 1.17E-40 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain LS838_RS09925 43143be42fc2ef8ffc19c18b5e7f8c11 616 SUPERFAMILY SSF52518 2 172 2.46E-44 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold LS838_RS09925 43143be42fc2ef8ffc19c18b5e7f8c11 616 Gene3D G3DSA:3.40.50.970 359 539 6.8E-53 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold LS838_RS09925 43143be42fc2ef8ffc19c18b5e7f8c11 616 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 323 4.3E-30 T 09-03-2017 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 LS838_RS09925 43143be42fc2ef8ffc19c18b5e7f8c11 616 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 172 8.1E-44 T 09-03-2017 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 LS838_RS09925 43143be42fc2ef8ffc19c18b5e7f8c11 616 Gene3D G3DSA:3.40.50.970 2 175 7.7E-50 T 09-03-2017 IPR029061 Thiamin diphosphate-binding fold LS838_RS09925 43143be42fc2ef8ffc19c18b5e7f8c11 616 Gene3D G3DSA:3.40.50.1220 188 347 1.3E-40 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain LS838_RS02740 d107b80e03caade773271cc1b572a301 381 SUPERFAMILY SSF47413 3 45 2.61E-5 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS02740 d107b80e03caade773271cc1b572a301 381 Gene3D G3DSA:1.10.260.40 4 95 1.3E-9 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS02740 d107b80e03caade773271cc1b572a301 381 Pfam PF13413 Helix-turn-helix domain 7 68 2.1E-25 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS09320 03a3d22ce602b414ceeb5574c2e3a4fb 166 SUPERFAMILY SSF52949 1 165 7.74E-63 T 09-03-2017 LS838_RS09320 03a3d22ce602b414ceeb5574c2e3a4fb 166 Pfam PF01661 Macro domain 19 130 4.0E-43 T 09-03-2017 IPR002589 Macro domain LS838_RS09320 03a3d22ce602b414ceeb5574c2e3a4fb 166 SMART SM00506 2 130 7.7E-47 T 09-03-2017 IPR002589 Macro domain LS838_RS09320 03a3d22ce602b414ceeb5574c2e3a4fb 166 Gene3D G3DSA:3.40.220.10 2 165 1.1E-70 T 09-03-2017 LS838_RS03685 a5dae8cd471788ced6cdf4fada50a816 399 Gene3D G3DSA:3.40.50.1950 3 177 6.7E-55 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 LS838_RS03685 a5dae8cd471788ced6cdf4fada50a816 399 Gene3D G3DSA:3.40.50.10300 180 397 1.6E-76 T 09-03-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 LS838_RS03685 a5dae8cd471788ced6cdf4fada50a816 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 181 365 2.4E-67 T 09-03-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 LS838_RS03685 a5dae8cd471788ced6cdf4fada50a816 399 SUPERFAMILY SSF102645 177 394 1.57E-68 T 09-03-2017 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 LS838_RS03685 a5dae8cd471788ced6cdf4fada50a816 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 388 8.6E-123 T 09-03-2017 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5 LS838_RS03685 a5dae8cd471788ced6cdf4fada50a816 399 SUPERFAMILY SSF52507 3 174 7.19E-51 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 LS838_RS03685 a5dae8cd471788ced6cdf4fada50a816 399 Pfam PF02441 Flavoprotein 3 129 2.3E-29 T 09-03-2017 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 LS838_RS02255 b85869487dd69e49ea6ed9219d75e08b 168 Gene3D G3DSA:3.90.79.10 3 151 6.5E-28 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LS838_RS02255 b85869487dd69e49ea6ed9219d75e08b 168 Pfam PF00293 NUDIX domain 40 148 1.5E-16 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LS838_RS02255 b85869487dd69e49ea6ed9219d75e08b 168 SUPERFAMILY SSF55811 5 161 3.79E-29 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LS838_RS06930 68ba2830ea8ff53fa0157b8768da1783 539 Pfam PF01943 Polysaccharide biosynthesis protein 14 320 2.4E-23 T 09-03-2017 IPR002797 Polysaccharide biosynthesis protein GO:0016020 LS838_RS06930 68ba2830ea8ff53fa0157b8768da1783 539 PIRSF PIRSF038958 9 539 4.2E-80 T 09-03-2017 IPR024923 Peptidoglycan biosynthesis protein, SpoVB type LS838_RS06930 68ba2830ea8ff53fa0157b8768da1783 539 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 374 522 5.3E-22 T 09-03-2017 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain LS838_RS01830 8db074d776b20785f6609188be0a3057 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 8.4E-47 T 09-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01830 8db074d776b20785f6609188be0a3057 102 Gene3D G3DSA:3.30.70.600 4 102 1.2E-45 T 09-03-2017 IPR027486 Ribosomal protein S10 domain LS838_RS01830 8db074d776b20785f6609188be0a3057 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 28.501 T 09-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01830 8db074d776b20785f6609188be0a3057 102 SMART SM01403 7 101 7.3E-60 T 09-03-2017 IPR027486 Ribosomal protein S10 domain LS838_RS01830 8db074d776b20785f6609188be0a3057 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.0E-20 T 09-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01830 8db074d776b20785f6609188be0a3057 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.0E-20 T 09-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01830 8db074d776b20785f6609188be0a3057 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.0E-20 T 09-03-2017 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01830 8db074d776b20785f6609188be0a3057 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 2.2E-37 T 09-03-2017 IPR027486 Ribosomal protein S10 domain LS838_RS01830 8db074d776b20785f6609188be0a3057 102 SUPERFAMILY SSF54999 5 102 9.42E-40 T 09-03-2017 IPR027486 Ribosomal protein S10 domain LS838_RS02550 fc9076cc79cab6594966c3d167a67968 148 SUPERFAMILY SSF52218 1 144 2.8E-37 T 09-03-2017 IPR029039 Flavoprotein-like domain LS838_RS02550 fc9076cc79cab6594966c3d167a67968 148 PRINTS PR00369 Flavodoxin signature 52 63 4.9E-5 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LS838_RS02550 fc9076cc79cab6594966c3d167a67968 148 PRINTS PR00369 Flavodoxin signature 4 17 4.9E-5 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LS838_RS02550 fc9076cc79cab6594966c3d167a67968 148 PRINTS PR00369 Flavodoxin signature 81 91 4.9E-5 T 09-03-2017 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 LS838_RS02550 fc9076cc79cab6594966c3d167a67968 148 Gene3D G3DSA:3.40.50.360 1 146 4.7E-37 T 09-03-2017 IPR029039 Flavoprotein-like domain LS838_RS02550 fc9076cc79cab6594966c3d167a67968 148 Pfam PF00258 Flavodoxin 5 129 6.1E-22 T 09-03-2017 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 LS838_RS02405 57e5b3ee43e887cbbb726a9a70f8b548 721 Gene3D G3DSA:3.30.1840.10 118 304 3.5E-66 T 09-03-2017 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 LS838_RS02405 57e5b3ee43e887cbbb726a9a70f8b548 721 Pfam PF13089 Polyphosphate kinase N-terminal domain 16 121 3.0E-36 T 09-03-2017 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 LS838_RS02405 57e5b3ee43e887cbbb726a9a70f8b548 721 Pfam PF02503 Polyphosphate kinase middle domain 131 324 3.0E-66 T 09-03-2017 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 LS838_RS02405 57e5b3ee43e887cbbb726a9a70f8b548 721 PIRSF PIRSF015589 2 703 3.8E-276 T 09-03-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 LS838_RS02405 57e5b3ee43e887cbbb726a9a70f8b548 721 Gene3D G3DSA:3.30.870.10 321 505 4.0E-75 T 09-03-2017 LS838_RS02405 57e5b3ee43e887cbbb726a9a70f8b548 721 SUPERFAMILY SSF56024 507 684 1.5E-67 T 09-03-2017 LS838_RS02405 57e5b3ee43e887cbbb726a9a70f8b548 721 Pfam PF13090 Polyphosphate kinase C-terminal domain 336 681 5.4E-154 T 09-03-2017 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 LS838_RS02405 57e5b3ee43e887cbbb726a9a70f8b548 721 Hamap MF_00347 Polyphosphate kinase [ppk]. 13 685 31.866 T 09-03-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 LS838_RS02405 57e5b3ee43e887cbbb726a9a70f8b548 721 Gene3D G3DSA:3.30.870.10 506 687 7.3E-70 T 09-03-2017 LS838_RS02405 57e5b3ee43e887cbbb726a9a70f8b548 721 SUPERFAMILY SSF140356 12 117 1.96E-35 T 09-03-2017 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 LS838_RS02405 57e5b3ee43e887cbbb726a9a70f8b548 721 SUPERFAMILY SSF143724 119 319 4.12E-58 T 09-03-2017 LS838_RS02405 57e5b3ee43e887cbbb726a9a70f8b548 721 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 15 682 1.6E-269 T 09-03-2017 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 LS838_RS02405 57e5b3ee43e887cbbb726a9a70f8b548 721 SUPERFAMILY SSF56024 322 502 2.43E-56 T 09-03-2017 LS838_RS00335 0e827d3b26cbe6a8e7763963256fe8e7 235 SMART SM00382 26 212 1.3E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS00335 0e827d3b26cbe6a8e7763963256fe8e7 235 SUPERFAMILY SSF52540 2 214 5.12E-62 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00335 0e827d3b26cbe6a8e7763963256fe8e7 235 Gene3D G3DSA:3.40.50.300 1 214 2.0E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00335 0e827d3b26cbe6a8e7763963256fe8e7 235 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS00335 0e827d3b26cbe6a8e7763963256fe8e7 235 Pfam PF00005 ABC transporter 17 163 3.2E-39 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS04770 49e955adea8fca17b7fa5b00baa53d2e 101 SUPERFAMILY SSF69118 9 99 1.26E-23 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 LS838_RS04770 49e955adea8fca17b7fa5b00baa53d2e 101 Pfam PF02627 Carboxymuconolactone decarboxylase family 17 98 2.0E-16 T 09-03-2017 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 LS838_RS04770 49e955adea8fca17b7fa5b00baa53d2e 101 Gene3D G3DSA:1.20.1290.10 9 98 3.4E-20 T 09-03-2017 IPR029032 AhpD-like Reactome: R-HSA-5628897 LS838_RS06845 1a7c26f6aedf92fdfbc4c91041c648b2 117 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 4 107 6.9E-22 T 09-03-2017 IPR010368 Control of competence regulator ComK, YlbF/YmcA LS838_RS06845 1a7c26f6aedf92fdfbc4c91041c648b2 117 Hamap MF_01526 UPF0342 protein . 1 112 17.607 T 09-03-2017 IPR010368 Control of competence regulator ComK, YlbF/YmcA LS838_RS06845 1a7c26f6aedf92fdfbc4c91041c648b2 117 SUPERFAMILY SSF158622 2 113 4.97E-30 T 09-03-2017 IPR023378 YheA/YmcA-like domain LS838_RS06845 1a7c26f6aedf92fdfbc4c91041c648b2 117 Gene3D G3DSA:1.20.1500.10 1 113 1.5E-34 T 09-03-2017 IPR023378 YheA/YmcA-like domain LS838_RS07745 24fe9bf4650d9c1897e1070422cc4622 352 Gene3D G3DSA:3.30.390.10 7 118 4.3E-30 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LS838_RS07745 24fe9bf4650d9c1897e1070422cc4622 352 Pfam PF13378 Enolase C-terminal domain-like 148 328 4.2E-42 T 09-03-2017 IPR029065 Enolase C-terminal domain-like LS838_RS07745 24fe9bf4650d9c1897e1070422cc4622 352 Gene3D G3DSA:3.20.20.120 125 335 2.1E-65 T 09-03-2017 IPR029065 Enolase C-terminal domain-like LS838_RS07745 24fe9bf4650d9c1897e1070422cc4622 352 SMART SM00922 145 244 4.9E-22 T 09-03-2017 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal LS838_RS07745 24fe9bf4650d9c1897e1070422cc4622 352 SUPERFAMILY SSF54826 6 129 1.47E-24 T 09-03-2017 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 LS838_RS07745 24fe9bf4650d9c1897e1070422cc4622 352 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 16 128 1.2E-14 T 09-03-2017 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain LS838_RS07745 24fe9bf4650d9c1897e1070422cc4622 352 SUPERFAMILY SSF51604 132 335 6.42E-55 T 09-03-2017 IPR029065 Enolase C-terminal domain-like LS838_RS07020 82dc6ad98e24b6fd18ceb62e8920f262 256 Gene3D G3DSA:3.40.50.10410 77 181 2.6E-30 T 09-03-2017 IPR023215 Nitrophenylphosphatase-like domain LS838_RS07020 82dc6ad98e24b6fd18ceb62e8920f262 256 TIGRFAM TIGR01457 HAD-SF-IIA-hyp2: HAD hydrolase, TIGR01457 family 4 253 1.9E-83 T 09-03-2017 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 LS838_RS07020 82dc6ad98e24b6fd18ceb62e8920f262 256 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 7 231 9.5E-41 T 09-03-2017 IPR006357 HAD-superfamily hydrolase, subfamily IIA LS838_RS07020 82dc6ad98e24b6fd18ceb62e8920f262 256 Pfam PF13344 Haloacid dehalogenase-like hydrolase 7 102 2.9E-17 T 09-03-2017 IPR006357 HAD-superfamily hydrolase, subfamily IIA LS838_RS07020 82dc6ad98e24b6fd18ceb62e8920f262 256 SUPERFAMILY SSF56784 3 254 2.71E-61 T 09-03-2017 IPR023214 HAD-like domain LS838_RS07020 82dc6ad98e24b6fd18ceb62e8920f262 256 Gene3D G3DSA:3.40.50.1000 182 254 5.2E-37 T 09-03-2017 IPR023214 HAD-like domain LS838_RS07020 82dc6ad98e24b6fd18ceb62e8920f262 256 Gene3D G3DSA:3.40.50.1000 2 76 5.2E-37 T 09-03-2017 IPR023214 HAD-like domain LS838_RS07020 82dc6ad98e24b6fd18ceb62e8920f262 256 Pfam PF13242 HAD-hyrolase-like 182 253 3.8E-16 T 09-03-2017 LS838_RS08480 f95a36077ae9794e889a48a9251fda08 759 Gene3D G3DSA:3.40.50.300 203 312 2.3E-32 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08480 f95a36077ae9794e889a48a9251fda08 759 Gene3D G3DSA:3.40.50.300 505 599 2.3E-32 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08480 f95a36077ae9794e889a48a9251fda08 759 Pfam PF13538 UvrD-like helicase C-terminal domain 696 737 4.3E-7 T 09-03-2017 IPR027785 UvrD-like helicase C-terminal domain LS838_RS08480 f95a36077ae9794e889a48a9251fda08 759 Gene3D G3DSA:3.40.50.300 600 751 4.4E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08480 f95a36077ae9794e889a48a9251fda08 759 SUPERFAMILY SSF52540 209 325 2.06E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08480 f95a36077ae9794e889a48a9251fda08 759 SUPERFAMILY SSF52540 386 629 2.06E-45 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08480 f95a36077ae9794e889a48a9251fda08 759 Pfam PF00580 UvrD/REP helicase N-terminal domain 211 568 6.0E-8 T 09-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LS838_RS08005 3f1beedfe5261063dda26a5a42f2021b 270 Pfam PF03609 PTS system sorbose-specific iic component 6 238 3.4E-68 T 09-03-2017 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 LS838_RS03455 ac19c68e86d65ecc2ae8974239847a57 375 Gene3D G3DSA:3.40.50.620 4 212 3.2E-99 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS03455 ac19c68e86d65ecc2ae8974239847a57 375 Pfam PF03054 tRNA methyl transferase 8 362 5.7E-138 T 09-03-2017 LS838_RS03455 ac19c68e86d65ecc2ae8974239847a57 375 Gene3D G3DSA:2.30.30.280 215 280 1.1E-29 T 09-03-2017 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 LS838_RS03455 ac19c68e86d65ecc2ae8974239847a57 375 Gene3D G3DSA:2.40.30.10 282 373 5.0E-25 T 09-03-2017 LS838_RS03455 ac19c68e86d65ecc2ae8974239847a57 375 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 8 362 1.2E-129 T 09-03-2017 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 LS838_RS03455 ac19c68e86d65ecc2ae8974239847a57 375 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 363 39.707 T 09-03-2017 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 LS838_RS03455 ac19c68e86d65ecc2ae8974239847a57 375 SUPERFAMILY SSF52402 8 245 6.4E-58 T 09-03-2017 LS838_RS00095 3361c1963d251702aecae4f3807caf3f 277 Pfam PF01381 Helix-turn-helix 7 50 1.4E-5 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LS838_RS00095 3361c1963d251702aecae4f3807caf3f 277 SUPERFAMILY SSF47413 1 60 1.44E-12 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS00095 3361c1963d251702aecae4f3807caf3f 277 Gene3D G3DSA:1.10.260.40 1 60 3.7E-10 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS00095 3361c1963d251702aecae4f3807caf3f 277 SMART SM00530 6 60 1.4E-5 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LS838_RS05725 e2bbe4786196ba37a4be6f3b8e0b2bb5 220 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 22 220 1.9E-53 T 09-03-2017 IPR005744 Hly-III GO:0016021|GO:0019835 LS838_RS05725 e2bbe4786196ba37a4be6f3b8e0b2bb5 220 Pfam PF03006 Haemolysin-III related 20 211 8.1E-33 T 09-03-2017 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 LS838_RS06585 c52fc502635ca7171da977c07d599af6 90 SUPERFAMILY SSF54975 1 89 2.4E-23 T 09-03-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LS838_RS06585 c52fc502635ca7171da977c07d599af6 90 Gene3D G3DSA:3.30.70.100 1 88 8.4E-24 T 09-03-2017 LS838_RS06585 c52fc502635ca7171da977c07d599af6 90 Pfam PF00708 Acylphosphatase 1 88 7.4E-25 T 09-03-2017 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 LS838_RS00280 8badfdec09650593a9fb41fdab9761e3 320 Gene3D G3DSA:2.60.120.10 230 316 2.5E-24 T 09-03-2017 IPR014710 RmlC-like jelly roll fold LS838_RS00280 8badfdec09650593a9fb41fdab9761e3 320 Pfam PF01238 Phosphomannose isomerase type I 5 198 1.2E-40 T 09-03-2017 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 LS838_RS00280 8badfdec09650593a9fb41fdab9761e3 320 Gene3D G3DSA:2.60.120.10 2 216 8.3E-78 T 09-03-2017 IPR014710 RmlC-like jelly roll fold LS838_RS00280 8badfdec09650593a9fb41fdab9761e3 320 SUPERFAMILY SSF51182 1 313 2.23E-99 T 09-03-2017 IPR011051 RmlC-like cupin domain LS838_RS00280 8badfdec09650593a9fb41fdab9761e3 320 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 102 314 5.1E-35 T 09-03-2017 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 LS838_RS00280 8badfdec09650593a9fb41fdab9761e3 320 PIRSF PIRSF036894 2 317 2.0E-121 T 09-03-2017 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 LS838_RS08800 233483a32000864588b0df3aa19b2479 291 Pfam PF13930 DNA/RNA non-specific endonuclease 128 259 1.3E-45 T 09-03-2017 LS838_RS09065 d3663dcd5cc89bd8a3918a58ea9f6147 656 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 184 273 9.9E-15 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LS838_RS09065 d3663dcd5cc89bd8a3918a58ea9f6147 656 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 183 264 7.6E-26 T 09-03-2017 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 LS838_RS09065 d3663dcd5cc89bd8a3918a58ea9f6147 656 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 303 651 1.0E-97 T 09-03-2017 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 LS838_RS09065 d3663dcd5cc89bd8a3918a58ea9f6147 656 SUPERFAMILY SSF55804 1 148 1.44E-44 T 09-03-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 LS838_RS09065 d3663dcd5cc89bd8a3918a58ea9f6147 656 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 1.5E-38 T 09-03-2017 IPR002178 PTS EIIA type-2 domain LS838_RS09065 d3663dcd5cc89bd8a3918a58ea9f6147 656 Gene3D G3DSA:3.40.930.10 1 148 1.9E-52 T 09-03-2017 IPR002178 PTS EIIA type-2 domain LS838_RS09065 d3663dcd5cc89bd8a3918a58ea9f6147 656 Gene3D G3DSA:3.40.50.2300 177 283 5.9E-40 T 09-03-2017 LS838_RS09065 d3663dcd5cc89bd8a3918a58ea9f6147 656 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 09-03-2017 IPR002178 PTS EIIA type-2 domain LS838_RS09065 d3663dcd5cc89bd8a3918a58ea9f6147 656 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 133 1.1E-38 T 09-03-2017 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 LS838_RS09065 d3663dcd5cc89bd8a3918a58ea9f6147 656 Pfam PF02378 Phosphotransferase system, EIIC 311 592 7.1E-18 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LS838_RS09065 d3663dcd5cc89bd8a3918a58ea9f6147 656 SUPERFAMILY SSF52794 182 281 2.62E-33 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LS838_RS06070 fa49181a2b0b8b2f1d0b2793cd5322a2 245 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 215 7.9E-61 T 09-03-2017 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LS838_RS06070 fa49181a2b0b8b2f1d0b2793cd5322a2 245 Gene3D G3DSA:3.40.1280.10 2 154 1.0E-61 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LS838_RS06070 fa49181a2b0b8b2f1d0b2793cd5322a2 245 Gene3D G3DSA:1.10.1270.20 155 238 3.1E-35 T 09-03-2017 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LS838_RS06070 fa49181a2b0b8b2f1d0b2793cd5322a2 245 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 245 102.689 T 09-03-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LS838_RS06070 fa49181a2b0b8b2f1d0b2793cd5322a2 245 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 226 1.4E-87 T 09-03-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LS838_RS06070 fa49181a2b0b8b2f1d0b2793cd5322a2 245 PIRSF PIRSF000386 1 244 1.2E-92 T 09-03-2017 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 LS838_RS06070 fa49181a2b0b8b2f1d0b2793cd5322a2 245 SUPERFAMILY SSF75217 2 241 8.97E-95 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases LS838_RS09045 a1e0554bbd7931f5147550bf4dc1f5a2 512 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 2 503 3.7E-121 T 09-03-2017 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 LS838_RS09045 a1e0554bbd7931f5147550bf4dc1f5a2 512 Pfam PF02652 L-lactate permease 4 502 8.1E-124 T 09-03-2017 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 LS838_RS00490 474e4f990a110932f944cffe6fb8da14 187 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 10 134 2.0E-35 T 09-03-2017 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 LS838_RS00490 474e4f990a110932f944cffe6fb8da14 187 SUPERFAMILY SSF89028 3 174 7.65E-49 T 09-03-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 LS838_RS00490 474e4f990a110932f944cffe6fb8da14 187 Pfam PF01923 Cobalamin adenosyltransferase 4 164 3.3E-46 T 09-03-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 LS838_RS00490 474e4f990a110932f944cffe6fb8da14 187 Gene3D G3DSA:1.20.1200.10 14 178 3.6E-48 T 09-03-2017 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 LS838_RS00490 474e4f990a110932f944cffe6fb8da14 187 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 5 174 4.5E-48 T 09-03-2017 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 LS838_RS08930 456c007d626c9967cb76da077c9ac13b 426 Pfam PF01926 50S ribosome-binding GTPase 206 332 3.4E-17 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS08930 456c007d626c9967cb76da077c9ac13b 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 281 299 1.6E-5 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS08930 456c007d626c9967cb76da077c9ac13b 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 207 227 1.6E-5 T 09-03-2017 IPR006073 GTP binding domain GO:0005525 LS838_RS08930 456c007d626c9967cb76da077c9ac13b 426 PIRSF PIRSF006809 2 425 1.3E-136 T 09-03-2017 IPR016496 GTPase HflX GO:0005525 LS838_RS08930 456c007d626c9967cb76da077c9ac13b 426 Pfam PF16360 GTP-binding GTPase Middle Region 114 199 2.3E-23 T 09-03-2017 IPR032305 GTP-binding protein, middle domain LS838_RS08930 456c007d626c9967cb76da077c9ac13b 426 Gene3D G3DSA:3.40.50.300 204 343 2.4E-26 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08930 456c007d626c9967cb76da077c9ac13b 426 Pfam PF13167 GTP-binding GTPase N-terminal 25 111 5.1E-28 T 09-03-2017 IPR025121 GTPase HflX, N-terminal LS838_RS08930 456c007d626c9967cb76da077c9ac13b 426 SUPERFAMILY SSF52540 205 378 8.76E-31 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08930 456c007d626c9967cb76da077c9ac13b 426 Hamap MF_00900 GTPase HflX [hflX]. 27 398 42.69 T 09-03-2017 IPR016496 GTPase HflX GO:0005525 LS838_RS08930 456c007d626c9967cb76da077c9ac13b 426 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 368 4.6E-122 T 09-03-2017 IPR016496 GTPase HflX GO:0005525 LS838_RS02735 ed65fb97856ba841cd7e92d56a07ea08 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 9.1E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS02735 ed65fb97856ba841cd7e92d56a07ea08 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 9.1E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS02735 ed65fb97856ba841cd7e92d56a07ea08 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 9.1E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS02735 ed65fb97856ba841cd7e92d56a07ea08 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 9.1E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS02735 ed65fb97856ba841cd7e92d56a07ea08 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 9.1E-23 T 09-03-2017 IPR002347 Short-chain dehydrogenase/reductase SDR LS838_RS02735 ed65fb97856ba841cd7e92d56a07ea08 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 09-03-2017 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 LS838_RS02735 ed65fb97856ba841cd7e92d56a07ea08 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 240 1.1E-33 T 09-03-2017 LS838_RS02735 ed65fb97856ba841cd7e92d56a07ea08 242 SUPERFAMILY SSF51735 2 240 9.45E-50 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS02735 ed65fb97856ba841cd7e92d56a07ea08 242 Gene3D G3DSA:3.40.50.720 2 241 1.6E-51 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS09200 630d5b98113ac1265876540452605d0b 308 Gene3D G3DSA:1.10.10.10 2 64 5.4E-9 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS09200 630d5b98113ac1265876540452605d0b 308 Pfam PF13280 WYL domain 140 304 1.9E-19 T 09-03-2017 IPR026881 WYL domain LS838_RS09200 630d5b98113ac1265876540452605d0b 308 SUPERFAMILY SSF46785 3 62 4.74E-7 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS09200 630d5b98113ac1265876540452605d0b 308 Pfam PF08279 HTH domain 6 60 1.7E-10 T 09-03-2017 IPR013196 Helix-turn-helix, type 11 LS838_RS09060 3d2a01e887dbde83005198911dd17a31 266 Gene3D G3DSA:3.40.50.1000 1 74 1.4E-39 T 09-03-2017 IPR023214 HAD-like domain LS838_RS09060 3d2a01e887dbde83005198911dd17a31 266 Gene3D G3DSA:3.40.50.1000 178 263 1.4E-39 T 09-03-2017 IPR023214 HAD-like domain LS838_RS09060 3d2a01e887dbde83005198911dd17a31 266 Gene3D G3DSA:3.30.1240.10 86 177 1.5E-19 T 09-03-2017 LS838_RS09060 3d2a01e887dbde83005198911dd17a31 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 230 1.2E-17 T 09-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 LS838_RS09060 3d2a01e887dbde83005198911dd17a31 266 SUPERFAMILY SSF56784 1 263 1.39E-58 T 09-03-2017 IPR023214 HAD-like domain LS838_RS09060 3d2a01e887dbde83005198911dd17a31 266 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 256 3.1E-48 T 09-03-2017 IPR023214 HAD-like domain LS838_RS09060 3d2a01e887dbde83005198911dd17a31 266 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 255 4.6E-43 T 09-03-2017 IPR000150 Cof protein GO:0016787 LS838_RS05640 ab845478437796e826c8b222411eafa2 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 239 252 - T 09-03-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 LS838_RS05640 ab845478437796e826c8b222411eafa2 394 Gene3D G3DSA:3.40.640.10 49 259 4.2E-65 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LS838_RS05640 ab845478437796e826c8b222411eafa2 394 SUPERFAMILY SSF53383 11 392 4.43E-107 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase LS838_RS05640 ab845478437796e826c8b222411eafa2 394 Pfam PF00155 Aminotransferase class I and II 36 387 1.3E-64 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LS838_RS05640 ab845478437796e826c8b222411eafa2 394 Gene3D G3DSA:3.90.1150.10 260 392 1.8E-39 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LS838_RS02990 d27fc3b13ab41c791ed179745a025512 324 SUPERFAMILY SSF56601 5 303 6.22E-60 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS02990 d27fc3b13ab41c791ed179745a025512 324 Pfam PF00144 Beta-lactamase 13 308 2.6E-42 T 09-03-2017 IPR001466 Beta-lactamase-related LS838_RS02990 d27fc3b13ab41c791ed179745a025512 324 Gene3D G3DSA:3.40.710.10 4 298 1.8E-57 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS05180 15bafe6cc482f155d74a43bf5dc39cb0 393 Gene3D G3DSA:3.90.1150.10 261 391 3.5E-38 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LS838_RS05180 15bafe6cc482f155d74a43bf5dc39cb0 393 SUPERFAMILY SSF53383 14 391 1.32E-103 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase LS838_RS05180 15bafe6cc482f155d74a43bf5dc39cb0 393 Gene3D G3DSA:3.40.640.10 50 260 5.5E-67 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LS838_RS05180 15bafe6cc482f155d74a43bf5dc39cb0 393 Pfam PF00155 Aminotransferase class I and II 37 385 3.1E-63 T 09-03-2017 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 LS838_RS05180 15bafe6cc482f155d74a43bf5dc39cb0 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 238 251 - T 09-03-2017 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 LS838_RS01350 619d69e193a6fd08a642c06de03fa589 153 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 80 153 9.0E-22 T 09-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LS838_RS01350 619d69e193a6fd08a642c06de03fa589 153 Pfam PF03449 Transcription elongation factor, N-terminal 6 74 4.1E-22 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LS838_RS01350 619d69e193a6fd08a642c06de03fa589 153 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 7 153 6.2E-42 T 09-03-2017 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 LS838_RS01350 619d69e193a6fd08a642c06de03fa589 153 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 153 26.418 T 09-03-2017 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 LS838_RS01350 619d69e193a6fd08a642c06de03fa589 153 Gene3D G3DSA:3.10.50.30 77 153 1.1E-22 T 09-03-2017 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 LS838_RS01350 619d69e193a6fd08a642c06de03fa589 153 SUPERFAMILY SSF46557 6 76 8.24E-22 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LS838_RS01350 619d69e193a6fd08a642c06de03fa589 153 PIRSF PIRSF006092 1 153 4.0E-44 T 09-03-2017 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 LS838_RS01350 619d69e193a6fd08a642c06de03fa589 153 Gene3D G3DSA:1.10.287.180 7 75 4.8E-24 T 09-03-2017 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 LS838_RS01350 619d69e193a6fd08a642c06de03fa589 153 SUPERFAMILY SSF54534 78 152 7.06E-17 T 09-03-2017 LS838_RS00365 63099f4664bee1565bcf44961be445ce 315 SUPERFAMILY SSF53448 1 255 1.59E-45 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS00365 63099f4664bee1565bcf44961be445ce 315 Gene3D G3DSA:3.90.550.10 1 141 1.6E-32 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS00365 63099f4664bee1565bcf44961be445ce 315 Pfam PF00535 Glycosyl transferase family 2 5 167 9.8E-35 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 LS838_RS04760 40d98ce19bef4edbbe4a1a16da40529b 171 Gene3D G3DSA:3.40.50.300 1 117 1.2E-11 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04760 40d98ce19bef4edbbe4a1a16da40529b 171 SUPERFAMILY SSF52540 1 162 1.31E-13 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04700 31373860164ec566143577abec35d98d 153 Gene3D G3DSA:3.30.70.1290 4 130 3.2E-42 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LS838_RS04700 31373860164ec566143577abec35d98d 153 Pfam PF01797 Transposase IS200 like 9 129 3.8E-35 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LS838_RS04700 31373860164ec566143577abec35d98d 153 SMART SM01321 9 129 5.8E-34 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LS838_RS04700 31373860164ec566143577abec35d98d 153 SUPERFAMILY SSF143422 3 129 3.27E-38 T 09-03-2017 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 LS838_RS02520 ec7b66f5f5b79d224f3872c6aeee56ac 695 Gene3D G3DSA:3.90.100.10 573 693 1.6E-29 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LS838_RS02520 ec7b66f5f5b79d224f3872c6aeee56ac 695 SUPERFAMILY SSF55904 550 686 5.1E-38 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LS838_RS02520 ec7b66f5f5b79d224f3872c6aeee56ac 695 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 90 528 3.2E-131 T 09-03-2017 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 LS838_RS02520 ec7b66f5f5b79d224f3872c6aeee56ac 695 SUPERFAMILY SSF53383 88 543 3.63E-97 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase LS838_RS02520 ec7b66f5f5b79d224f3872c6aeee56ac 695 TIGRFAM TIGR04318 lacto_ODC_hypo: putative ornithine decarboxylase 1 692 0.0 T 09-03-2017 IPR027605 Putative ornithine decarboxylase, Lactobacillus LS838_RS02520 ec7b66f5f5b79d224f3872c6aeee56ac 695 Gene3D G3DSA:3.40.640.10 90 393 3.1E-99 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LS838_RS02520 ec7b66f5f5b79d224f3872c6aeee56ac 695 Gene3D G3DSA:3.90.1150.10 400 572 3.8E-62 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LS838_RS02520 ec7b66f5f5b79d224f3872c6aeee56ac 695 PIRSF PIRSF009393 30 694 3.4E-213 T 09-03-2017 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 LS838_RS02520 ec7b66f5f5b79d224f3872c6aeee56ac 695 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 555 683 1.9E-42 T 09-03-2017 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 LS838_RS09860 374ca8e8bd4d8ab857687a77bd6c03ed 526 SUPERFAMILY SSF52540 342 516 3.05E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09860 374ca8e8bd4d8ab857687a77bd6c03ed 526 SUPERFAMILY SSF90123 14 298 6.41E-26 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS09860 374ca8e8bd4d8ab857687a77bd6c03ed 526 SMART SM00382 347 526 7.8E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS09860 374ca8e8bd4d8ab857687a77bd6c03ed 526 Gene3D G3DSA:3.40.50.300 324 510 3.8E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09860 374ca8e8bd4d8ab857687a77bd6c03ed 526 Pfam PF00664 ABC transporter transmembrane region 110 282 1.0E-12 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS09860 374ca8e8bd4d8ab857687a77bd6c03ed 526 Pfam PF00005 ABC transporter 343 475 1.2E-18 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS09860 374ca8e8bd4d8ab857687a77bd6c03ed 526 Gene3D G3DSA:1.20.1560.10 14 303 6.8E-21 T 09-03-2017 LS838_RS06625 9ad2a0ecebe3b227486e303959394d35 212 SUPERFAMILY SSF52374 24 211 4.07E-54 T 09-03-2017 LS838_RS06625 9ad2a0ecebe3b227486e303959394d35 212 Gene3D G3DSA:3.40.50.620 22 211 7.1E-65 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS06625 9ad2a0ecebe3b227486e303959394d35 212 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 29 210 6.5E-54 T 09-03-2017 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 LS838_RS06625 9ad2a0ecebe3b227486e303959394d35 212 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 25 211 30.093 T 09-03-2017 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 LS838_RS06625 9ad2a0ecebe3b227486e303959394d35 212 Pfam PF01467 Cytidylyltransferase-like 29 185 3.6E-29 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LS838_RS00180 08d8b6fc1a4812f965cecb2db4c16b3b 159 Pfam PF14317 YcxB-like protein 97 147 5.2E-7 T 09-03-2017 IPR025588 YcxB-like protein LS838_RS08655 9abd11a717f0bbff0c655ef3e03f5486 122 Gene3D G3DSA:1.10.260.40 5 112 4.3E-23 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS08655 9abd11a717f0bbff0c655ef3e03f5486 122 Pfam PF01381 Helix-turn-helix 10 60 1.4E-17 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LS838_RS08655 9abd11a717f0bbff0c655ef3e03f5486 122 SMART SM00530 9 64 2.1E-16 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LS838_RS08655 9abd11a717f0bbff0c655ef3e03f5486 122 SUPERFAMILY SSF47413 3 67 2.82E-20 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS05425 e66b9b4a2ea03f7a7cb049bdd5826dca 230 Gene3D G3DSA:3.40.50.150 8 107 9.9E-11 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS05425 e66b9b4a2ea03f7a7cb049bdd5826dca 230 SUPERFAMILY SSF53335 4 135 6.67E-12 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS05425 e66b9b4a2ea03f7a7cb049bdd5826dca 230 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 18 218 6.8E-57 T 09-03-2017 IPR006901 tRNA methyltransferase TrmK GO:0016429 LS838_RS05425 e66b9b4a2ea03f7a7cb049bdd5826dca 230 PIRSF PIRSF018637 1 226 2.8E-65 T 09-03-2017 IPR006901 tRNA methyltransferase TrmK GO:0016429 LS838_RS02455 64c8df37451e1f6ec854cc6b0e54ff0c 121 TIGRFAM TIGR01076 sortase_fam: sortase 1 71 7.4E-27 T 09-03-2017 IPR005754 Sortase family LS838_RS02455 64c8df37451e1f6ec854cc6b0e54ff0c 121 Pfam PF04203 Sortase family 2 64 1.9E-9 T 09-03-2017 IPR005754 Sortase family LS838_RS02455 64c8df37451e1f6ec854cc6b0e54ff0c 121 SUPERFAMILY SSF63817 1 68 3.4E-22 T 09-03-2017 IPR023365 Sortase domain LS838_RS02455 64c8df37451e1f6ec854cc6b0e54ff0c 121 Gene3D G3DSA:2.40.260.10 1 69 3.5E-25 T 09-03-2017 IPR023365 Sortase domain LS838_RS00825 5e600d599e79b857a13ec3a733858014 372 SMART SM00257 31 74 9.2E-17 T 09-03-2017 IPR018392 LysM domain LS838_RS00825 5e600d599e79b857a13ec3a733858014 372 SMART SM00257 96 139 5.0E-17 T 09-03-2017 IPR018392 LysM domain LS838_RS00825 5e600d599e79b857a13ec3a733858014 372 Gene3D G3DSA:3.10.350.10 95 138 4.2E-19 T 09-03-2017 IPR018392 LysM domain LS838_RS00825 5e600d599e79b857a13ec3a733858014 372 Gene3D G3DSA:3.10.350.10 31 75 8.2E-18 T 09-03-2017 IPR018392 LysM domain LS838_RS00825 5e600d599e79b857a13ec3a733858014 372 SUPERFAMILY SSF54001 250 365 1.44E-38 T 09-03-2017 LS838_RS00825 5e600d599e79b857a13ec3a733858014 372 SUPERFAMILY SSF54106 31 74 9.81E-12 T 09-03-2017 IPR018392 LysM domain LS838_RS00825 5e600d599e79b857a13ec3a733858014 372 Pfam PF00877 NlpC/P60 family 269 360 4.8E-24 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain LS838_RS00825 5e600d599e79b857a13ec3a733858014 372 Gene3D G3DSA:3.90.1720.10 250 368 1.0E-40 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain LS838_RS00825 5e600d599e79b857a13ec3a733858014 372 Pfam PF01476 LysM domain 32 74 4.1E-14 T 09-03-2017 IPR018392 LysM domain LS838_RS00825 5e600d599e79b857a13ec3a733858014 372 Pfam PF01476 LysM domain 97 137 6.5E-15 T 09-03-2017 IPR018392 LysM domain LS838_RS00825 5e600d599e79b857a13ec3a733858014 372 SUPERFAMILY SSF54106 95 138 4.71E-12 T 09-03-2017 IPR018392 LysM domain LS838_RS02295 01fe4c0ed29a6e14a0a2ab9ac61dafa1 623 SUPERFAMILY SSF52794 542 622 8.37E-6 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LS838_RS02295 01fe4c0ed29a6e14a0a2ab9ac61dafa1 623 SUPERFAMILY SSF52794 411 500 5.75E-20 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LS838_RS02295 01fe4c0ed29a6e14a0a2ab9ac61dafa1 623 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 413 497 1.8E-6 T 09-03-2017 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 LS838_RS02295 01fe4c0ed29a6e14a0a2ab9ac61dafa1 623 Gene3D G3DSA:3.40.50.10370 532 623 2.3E-14 T 09-03-2017 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 LS838_RS02295 01fe4c0ed29a6e14a0a2ab9ac61dafa1 623 Gene3D G3DSA:3.40.50.10370 410 502 3.0E-38 T 09-03-2017 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 LS838_RS02295 01fe4c0ed29a6e14a0a2ab9ac61dafa1 623 Pfam PF02378 Phosphotransferase system, EIIC 23 307 6.3E-23 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LS838_RS07610 677d429d88276f64ac30c884b4ab3bb9 124 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 3.6E-16 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LS838_RS07610 677d429d88276f64ac30c884b4ab3bb9 124 SUPERFAMILY SSF46785 4 79 9.58E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS07610 677d429d88276f64ac30c884b4ab3bb9 124 Gene3D G3DSA:1.10.10.10 8 76 3.4E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS07610 677d429d88276f64ac30c884b4ab3bb9 124 SMART SM00345 16 75 1.5E-15 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LS838_RS01970 132a9f015822df3485bb7f2411fe5eb6 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 2 127 1.4E-43 T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01970 132a9f015822df3485bb7f2411fe5eb6 127 Pfam PF01196 Ribosomal protein L17 16 127 7.7E-38 T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01970 132a9f015822df3485bb7f2411fe5eb6 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 127 25.812 T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01970 132a9f015822df3485bb7f2411fe5eb6 127 Gene3D G3DSA:3.90.1030.10 2 127 6.7E-48 T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01970 132a9f015822df3485bb7f2411fe5eb6 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 30 52 - T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01970 132a9f015822df3485bb7f2411fe5eb6 127 SUPERFAMILY SSF64263 2 127 5.36E-41 T 09-03-2017 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS03670 cad1ffa205025342389f987617566681 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 62 1.7E-15 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS03670 cad1ffa205025342389f987617566681 304 Gene3D G3DSA:3.40.190.10 175 258 7.3E-10 T 09-03-2017 LS838_RS03670 cad1ffa205025342389f987617566681 304 Gene3D G3DSA:3.40.190.10 90 174 1.4E-22 T 09-03-2017 LS838_RS03670 cad1ffa205025342389f987617566681 304 SUPERFAMILY SSF53850 90 292 5.25E-35 T 09-03-2017 LS838_RS03670 cad1ffa205025342389f987617566681 304 Gene3D G3DSA:1.10.10.10 8 86 2.7E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS03670 cad1ffa205025342389f987617566681 304 Pfam PF03466 LysR substrate binding domain 88 285 1.2E-36 T 09-03-2017 IPR005119 LysR, substrate-binding LS838_RS03670 cad1ffa205025342389f987617566681 304 SUPERFAMILY SSF46785 7 111 1.46E-19 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS02940 22d326cb8a313377e90299a197850d3e 177 Pfam PF00929 Exonuclease 4 157 3.7E-18 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LS838_RS02940 22d326cb8a313377e90299a197850d3e 177 SMART SM00479 2 167 2.6E-22 T 09-03-2017 IPR013520 Exonuclease, RNase T/DNA polymerase III LS838_RS02940 22d326cb8a313377e90299a197850d3e 177 SUPERFAMILY SSF53098 1 164 3.98E-40 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS02940 22d326cb8a313377e90299a197850d3e 177 Gene3D G3DSA:3.30.420.10 1 165 3.8E-41 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS00810 48b5453cc69d50bc68c7986e9f27ba96 184 Pfam PF04011 LemA family 5 184 2.7E-66 T 09-03-2017 IPR007156 LemA LS838_RS00810 48b5453cc69d50bc68c7986e9f27ba96 184 SUPERFAMILY SSF140478 24 174 2.88E-53 T 09-03-2017 IPR023353 LemA-like domain LS838_RS00810 48b5453cc69d50bc68c7986e9f27ba96 184 Gene3D G3DSA:1.20.1440.20 12 184 1.4E-61 T 09-03-2017 IPR023353 LemA-like domain LS838_RS06855 3a6735fd2b54f3e5a5a25a6be8ea8111 282 Pfam PF00849 RNA pseudouridylate synthase 89 237 7.1E-29 T 09-03-2017 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS06855 3a6735fd2b54f3e5a5a25a6be8ea8111 282 SUPERFAMILY SSF55120 82 273 2.24E-51 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS02345 e421e826f06bca561a635492770e9dd1 261 Pfam PF01177 Asp/Glu/Hydantoin racemase 10 210 5.7E-28 T 09-03-2017 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS02345 e421e826f06bca561a635492770e9dd1 261 Hamap MF_00258 Glutamate racemase [murI]. 8 257 31.134 T 09-03-2017 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS02345 e421e826f06bca561a635492770e9dd1 261 TIGRFAM TIGR00067 glut_race: glutamate racemase 10 242 1.1E-61 T 09-03-2017 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS02345 e421e826f06bca561a635492770e9dd1 261 SUPERFAMILY SSF53681 115 227 3.66E-24 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS02345 e421e826f06bca561a635492770e9dd1 261 Gene3D G3DSA:3.40.50.1860 7 176 2.0E-50 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS02345 e421e826f06bca561a635492770e9dd1 261 SUPERFAMILY SSF53681 9 109 4.58E-32 T 09-03-2017 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS00215 88535365497c4762f564da83c4fbce38 344 SUPERFAMILY SSF53335 12 287 9.15E-42 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS00215 88535365497c4762f564da83c4fbce38 344 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 14 281 6.5E-36 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LS838_RS00215 88535365497c4762f564da83c4fbce38 344 Gene3D G3DSA:3.40.50.150 192 293 1.7E-25 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS00215 88535365497c4762f564da83c4fbce38 344 Gene3D G3DSA:3.40.50.150 13 68 1.7E-25 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS00215 88535365497c4762f564da83c4fbce38 344 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 14 30 2.8E-10 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LS838_RS00215 88535365497c4762f564da83c4fbce38 344 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 38 52 2.8E-10 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LS838_RS00215 88535365497c4762f564da83c4fbce38 344 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 206 218 2.8E-10 T 09-03-2017 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 LS838_RS00215 88535365497c4762f564da83c4fbce38 344 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 209 215 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LS838_RS05465 4ce5b93aacdc1a536d6e05ff7af9b6b1 704 Pfam PF13337 Putative ATP-dependent Lon protease 20 494 3.5E-200 T 09-03-2017 IPR014061 Conserved hypothetical protein CHP02688 LS838_RS05465 4ce5b93aacdc1a536d6e05ff7af9b6b1 704 Gene3D G3DSA:3.30.230.10 522 697 3.1E-18 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LS838_RS05465 4ce5b93aacdc1a536d6e05ff7af9b6b1 704 SUPERFAMILY SSF54211 524 702 2.43E-21 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LS838_RS05465 4ce5b93aacdc1a536d6e05ff7af9b6b1 704 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 540 696 3.6E-10 T 09-03-2017 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 LS838_RS05465 4ce5b93aacdc1a536d6e05ff7af9b6b1 704 TIGRFAM TIGR02688 TIGR02688: TIGR02688 family protein 18 485 4.6E-173 T 09-03-2017 IPR014061 Conserved hypothetical protein CHP02688 LS838_RS05465 4ce5b93aacdc1a536d6e05ff7af9b6b1 704 TIGRFAM TIGR02653 Lon_rel_chp: conserved hypothetical protein 12 703 2.6E-302 T 09-03-2017 IPR013473 Conserved hypothetical protein CHP02653, peptidase S16 non-peptidase homologue LS838_RS01815 601cba270117d56a9db31678ae2cec79 135 Gene3D G3DSA:2.40.50.140 1 134 1.5E-60 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS01815 601cba270117d56a9db31678ae2cec79 135 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 134 3.8E-65 T 09-03-2017 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01815 601cba270117d56a9db31678ae2cec79 135 PIRSF PIRSF002133 1 135 1.2E-47 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01815 601cba270117d56a9db31678ae2cec79 135 SUPERFAMILY SSF50249 3 134 8.48E-47 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS01815 601cba270117d56a9db31678ae2cec79 135 Pfam PF00164 Ribosomal protein S12/S23 2 134 5.5E-40 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01815 601cba270117d56a9db31678ae2cec79 135 PRINTS PR01034 Ribosomal protein S12 signature 71 90 7.2E-55 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01815 601cba270117d56a9db31678ae2cec79 135 PRINTS PR01034 Ribosomal protein S12 signature 90 107 7.2E-55 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01815 601cba270117d56a9db31678ae2cec79 135 PRINTS PR01034 Ribosomal protein S12 signature 107 123 7.2E-55 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01815 601cba270117d56a9db31678ae2cec79 135 PRINTS PR01034 Ribosomal protein S12 signature 55 70 7.2E-55 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01815 601cba270117d56a9db31678ae2cec79 135 PRINTS PR01034 Ribosomal protein S12 signature 40 55 7.2E-55 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01815 601cba270117d56a9db31678ae2cec79 135 PRINTS PR01034 Ribosomal protein S12 signature 123 135 7.2E-55 T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01815 601cba270117d56a9db31678ae2cec79 135 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 09-03-2017 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01815 601cba270117d56a9db31678ae2cec79 135 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 134 37.511 T 09-03-2017 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS07540 f50f257e980325e220b384ba5f98b9d0 130 Pfam PF00557 Metallopeptidase family M24 13 102 1.8E-26 T 09-03-2017 IPR000994 Peptidase M24, structural domain LS838_RS07540 f50f257e980325e220b384ba5f98b9d0 130 SUPERFAMILY SSF55920 6 100 1.3E-28 T 09-03-2017 IPR000994 Peptidase M24, structural domain LS838_RS07540 f50f257e980325e220b384ba5f98b9d0 130 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 61 73 - T 09-03-2017 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site LS838_RS07540 f50f257e980325e220b384ba5f98b9d0 130 Gene3D G3DSA:3.90.230.10 11 99 2.1E-30 T 09-03-2017 IPR000994 Peptidase M24, structural domain LS838_RS03080 a29cbb3ee86ebc018e0dadd4c5ca693d 332 Pfam PF00482 Type II secretion system (T2SS), protein F 206 324 1.4E-10 T 09-03-2017 IPR018076 Type II secretion system F domain LS838_RS03080 a29cbb3ee86ebc018e0dadd4c5ca693d 332 Pfam PF00482 Type II secretion system (T2SS), protein F 21 132 1.1E-6 T 09-03-2017 IPR018076 Type II secretion system F domain LS838_RS06795 9d65e2ee017da138e397ae5c693578ff 116 Pfam PF12732 YtxH-like protein 9 99 5.1E-9 T 09-03-2017 IPR024623 Uncharacterised protein family YtxH LS838_RS06795 9d65e2ee017da138e397ae5c693578ff 116 SUPERFAMILY SSF58100 21 113 1.57E-5 T 09-03-2017 LS838_RS07335 1629c1348c87de711f60b176ab9d2dcd 426 SUPERFAMILY SSF52343 311 424 3.67E-16 T 09-03-2017 LS838_RS07335 1629c1348c87de711f60b176ab9d2dcd 426 Pfam PF08022 FAD-binding domain 213 291 5.0E-9 T 09-03-2017 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 LS838_RS07335 1629c1348c87de711f60b176ab9d2dcd 426 Gene3D G3DSA:2.40.30.10 209 291 8.8E-12 T 09-03-2017 LS838_RS07335 1629c1348c87de711f60b176ab9d2dcd 426 SUPERFAMILY SSF63380 211 302 2.72E-11 T 09-03-2017 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 LS838_RS07335 1629c1348c87de711f60b176ab9d2dcd 426 Gene3D G3DSA:3.40.50.80 308 424 5.1E-13 T 09-03-2017 LS838_RS00345 b4e4089fafa90e5f19e2e60bd51a4c99 304 Gene3D G3DSA:3.40.50.2300 52 155 5.7E-16 T 09-03-2017 LS838_RS00345 b4e4089fafa90e5f19e2e60bd51a4c99 304 SMART SM00354 2 64 3.2E-14 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LS838_RS00345 b4e4089fafa90e5f19e2e60bd51a4c99 304 Gene3D G3DSA:3.40.50.2300 156 284 7.9E-19 T 09-03-2017 LS838_RS00345 b4e4089fafa90e5f19e2e60bd51a4c99 304 SUPERFAMILY SSF53822 52 299 2.78E-37 T 09-03-2017 IPR028082 Periplasmic binding protein-like I LS838_RS00345 b4e4089fafa90e5f19e2e60bd51a4c99 304 Gene3D G3DSA:1.10.260.40 2 51 7.9E-15 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS00345 b4e4089fafa90e5f19e2e60bd51a4c99 304 SUPERFAMILY SSF47413 2 51 4.31E-10 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS00345 b4e4089fafa90e5f19e2e60bd51a4c99 304 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 9.7E-12 T 09-03-2017 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 LS838_RS00345 b4e4089fafa90e5f19e2e60bd51a4c99 304 Pfam PF13377 Periplasmic binding protein-like domain 152 301 2.9E-12 T 09-03-2017 LS838_RS04535 f44ed1f2632306028c3135ed8862e0c6 770 SUPERFAMILY SSF56601 295 686 1.77E-93 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS04535 f44ed1f2632306028c3135ed8862e0c6 770 SUPERFAMILY SSF56601 238 260 1.77E-93 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS04535 f44ed1f2632306028c3135ed8862e0c6 770 SUPERFAMILY SSF53955 69 280 1.35E-64 T 09-03-2017 IPR023346 Lysozyme-like domain LS838_RS04535 f44ed1f2632306028c3135ed8862e0c6 770 Gene3D G3DSA:1.10.3810.10 79 258 3.9E-63 T 09-03-2017 LS838_RS04535 f44ed1f2632306028c3135ed8862e0c6 770 Pfam PF00912 Transglycosylase 78 256 5.3E-57 T 09-03-2017 IPR001264 Glycosyl transferase, family 51 LS838_RS04535 f44ed1f2632306028c3135ed8862e0c6 770 Pfam PF00905 Penicillin binding protein transpeptidase domain 350 625 8.0E-33 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LS838_RS04535 f44ed1f2632306028c3135ed8862e0c6 770 Gene3D G3DSA:3.40.710.10 259 685 4.2E-93 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS05805 07bbc5b8bfbaa420e477103dc5363453 500 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 312 494 4.6E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS05805 07bbc5b8bfbaa420e477103dc5363453 500 SUPERFAMILY SSF53850 1 266 2.17E-54 T 09-03-2017 LS838_RS05805 07bbc5b8bfbaa420e477103dc5363453 500 SMART SM00062 47 272 6.7E-43 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LS838_RS05805 07bbc5b8bfbaa420e477103dc5363453 500 SUPERFAMILY SSF161098 293 479 2.35E-46 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS05805 07bbc5b8bfbaa420e477103dc5363453 500 Gene3D G3DSA:3.40.190.10 128 233 9.3E-18 T 09-03-2017 LS838_RS05805 07bbc5b8bfbaa420e477103dc5363453 500 Gene3D G3DSA:1.10.3720.10 292 494 7.7E-52 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS05805 07bbc5b8bfbaa420e477103dc5363453 500 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 294 388 5.1E-26 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LS838_RS05805 07bbc5b8bfbaa420e477103dc5363453 500 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 261 6.4E-50 T 09-03-2017 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF LS838_RS05805 07bbc5b8bfbaa420e477103dc5363453 500 Gene3D G3DSA:3.40.190.10 234 269 5.2E-35 T 09-03-2017 LS838_RS05805 07bbc5b8bfbaa420e477103dc5363453 500 Gene3D G3DSA:3.40.190.10 44 127 5.2E-35 T 09-03-2017 LS838_RS02305 8c807bc30e690fa96adc54d897408b39 381 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 5.2E-20 T 09-03-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LS838_RS02305 8c807bc30e690fa96adc54d897408b39 381 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 5.2E-20 T 09-03-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LS838_RS02305 8c807bc30e690fa96adc54d897408b39 381 PRINTS PR00084 Mannitol dehydrogenase signature 169 184 5.2E-20 T 09-03-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LS838_RS02305 8c807bc30e690fa96adc54d897408b39 381 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 5.2E-20 T 09-03-2017 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LS838_RS02305 8c807bc30e690fa96adc54d897408b39 381 Gene3D G3DSA:1.10.1040.10 203 379 7.6E-43 T 09-03-2017 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 LS838_RS02305 8c807bc30e690fa96adc54d897408b39 381 Gene3D G3DSA:3.40.50.720 1 198 6.0E-32 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS02305 8c807bc30e690fa96adc54d897408b39 381 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 124 8.8E-24 T 09-03-2017 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 LS838_RS02305 8c807bc30e690fa96adc54d897408b39 381 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 151 163 - T 09-03-2017 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LS838_RS02305 8c807bc30e690fa96adc54d897408b39 381 SUPERFAMILY SSF48179 203 376 1.56E-43 T 09-03-2017 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 LS838_RS02305 8c807bc30e690fa96adc54d897408b39 381 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 150 373 1.9E-64 T 09-03-2017 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 LS838_RS02305 8c807bc30e690fa96adc54d897408b39 381 SUPERFAMILY SSF51735 1 191 3.41E-44 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS02305 8c807bc30e690fa96adc54d897408b39 381 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 377 39.847 T 09-03-2017 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 LS838_RS02675 7cfeef7a40de2ca8e6ed3216feb23edc 265 Gene3D G3DSA:3.40.50.10330 30 120 1.9E-19 T 09-03-2017 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LS838_RS02675 7cfeef7a40de2ca8e6ed3216feb23edc 265 Gene3D G3DSA:2.60.200.30 121 237 7.1E-32 T 09-03-2017 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LS838_RS02675 7cfeef7a40de2ca8e6ed3216feb23edc 265 Hamap MF_00361 NAD kinase [nadK]. 1 263 24.213 T 09-03-2017 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LS838_RS02675 7cfeef7a40de2ca8e6ed3216feb23edc 265 Pfam PF01513 ATP-NAD kinase 33 225 1.5E-25 T 09-03-2017 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 LS838_RS02675 7cfeef7a40de2ca8e6ed3216feb23edc 265 SUPERFAMILY SSF111331 19 261 1.23E-57 T 09-03-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain LS838_RS03430 e1a7513a26c36388665b9335de7ccd2b 185 Pfam PF00293 NUDIX domain 41 161 1.2E-18 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LS838_RS03430 e1a7513a26c36388665b9335de7ccd2b 185 Gene3D G3DSA:3.90.79.10 5 178 8.5E-52 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LS838_RS03430 e1a7513a26c36388665b9335de7ccd2b 185 SUPERFAMILY SSF55811 7 179 3.38E-47 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LS838_RS00020 2ff4e303307696dca0864676233982ef 381 ProSitePatterns PS00618 RecF protein signature 2. 313 331 - T 09-03-2017 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 LS838_RS00020 2ff4e303307696dca0864676233982ef 381 Gene3D G3DSA:3.40.50.300 1 166 3.1E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00020 2ff4e303307696dca0864676233982ef 381 Gene3D G3DSA:3.40.50.300 241 352 3.1E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00020 2ff4e303307696dca0864676233982ef 381 SUPERFAMILY SSF52540 1 217 7.16E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00020 2ff4e303307696dca0864676233982ef 381 SUPERFAMILY SSF52540 248 371 7.16E-39 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00020 2ff4e303307696dca0864676233982ef 381 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 368 1.1E-113 T 09-03-2017 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 LS838_RS00020 2ff4e303307696dca0864676233982ef 381 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 381 97.505 T 09-03-2017 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 LS838_RS00020 2ff4e303307696dca0864676233982ef 381 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 347 5.9E-16 T 09-03-2017 IPR003395 RecF/RecN/SMC, N-terminal LS838_RS00020 2ff4e303307696dca0864676233982ef 381 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 09-03-2017 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 LS838_RS01295 c8947f6914ff3a89d0c54e699916bbec 124 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 18 40 - T 09-03-2017 IPR023765 Solute-binding protein family 5, conserved site LS838_RS01295 c8947f6914ff3a89d0c54e699916bbec 124 Gene3D G3DSA:3.90.76.10 2 120 4.9E-40 T 09-03-2017 LS838_RS01295 c8947f6914ff3a89d0c54e699916bbec 124 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 12 117 6.6E-28 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain LS838_RS01295 c8947f6914ff3a89d0c54e699916bbec 124 SUPERFAMILY SSF53850 1 120 2.17E-37 T 09-03-2017 LS838_RS01710 12573d84ccac2dfbe05d40a3193c1e68 541 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 459 3.1E-67 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain LS838_RS01710 12573d84ccac2dfbe05d40a3193c1e68 541 PIRSF PIRSF002741 1 541 8.6E-88 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LS838_RS01710 12573d84ccac2dfbe05d40a3193c1e68 541 Gene3D G3DSA:3.10.105.10 292 509 9.7E-43 T 09-03-2017 LS838_RS01710 12573d84ccac2dfbe05d40a3193c1e68 541 Gene3D G3DSA:3.90.76.10 44 217 2.6E-41 T 09-03-2017 LS838_RS01710 12573d84ccac2dfbe05d40a3193c1e68 541 SUPERFAMILY SSF53850 29 538 9.23E-108 T 09-03-2017 LS838_RS03395 3d34e6f4f5e2ec1080b49e881caed706 460 SUPERFAMILY SSF53067 198 368 6.24E-32 T 09-03-2017 LS838_RS03395 3d34e6f4f5e2ec1080b49e881caed706 460 SMART SM00842 7 194 1.4E-57 T 09-03-2017 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 LS838_RS03395 3d34e6f4f5e2ec1080b49e881caed706 460 Gene3D G3DSA:3.30.420.40 195 231 6.6E-15 T 09-03-2017 LS838_RS03395 3d34e6f4f5e2ec1080b49e881caed706 460 Gene3D G3DSA:3.30.420.40 296 348 6.6E-15 T 09-03-2017 LS838_RS03395 3d34e6f4f5e2ec1080b49e881caed706 460 Gene3D G3DSA:3.90.640.10 233 295 4.0E-21 T 09-03-2017 LS838_RS03395 3d34e6f4f5e2ec1080b49e881caed706 460 SUPERFAMILY SSF53067 6 194 5.33E-43 T 09-03-2017 LS838_RS03395 3d34e6f4f5e2ec1080b49e881caed706 460 PIRSF PIRSF003101 1 459 9.4E-102 T 09-03-2017 IPR020823 Cell division protein FtsA GO:0007049 LS838_RS03395 3d34e6f4f5e2ec1080b49e881caed706 460 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 7 370 4.8E-76 T 09-03-2017 IPR020823 Cell division protein FtsA GO:0007049 LS838_RS03395 3d34e6f4f5e2ec1080b49e881caed706 460 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 206 219 - T 09-03-2017 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 LS838_RS03395 3d34e6f4f5e2ec1080b49e881caed706 460 Pfam PF14450 Cell division protein FtsA 205 366 4.0E-14 T 09-03-2017 LS838_RS03395 3d34e6f4f5e2ec1080b49e881caed706 460 Pfam PF02491 SHS2 domain inserted in FTSA 85 160 1.0E-12 T 09-03-2017 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 LS838_RS03395 3d34e6f4f5e2ec1080b49e881caed706 460 Hamap MF_02033 Cell division protein FtsA [ftsA]. 3 459 22.119 T 09-03-2017 IPR020823 Cell division protein FtsA GO:0007049 LS838_RS03395 3d34e6f4f5e2ec1080b49e881caed706 460 Gene3D G3DSA:3.30.420.40 3 138 1.2E-37 T 09-03-2017 LS838_RS06660 0d4b6973b111d166eff5b5a0e6674f42 178 SUPERFAMILY SSF48295 47 116 1.78E-17 T 09-03-2017 IPR010921 Trp repressor/replication initiator GO:0043565 LS838_RS06660 0d4b6973b111d166eff5b5a0e6674f42 178 SUPERFAMILY SSF48295 2 57 2.77E-9 T 09-03-2017 IPR010921 Trp repressor/replication initiator GO:0043565 LS838_RS06660 0d4b6973b111d166eff5b5a0e6674f42 178 Pfam PF13518 Helix-turn-helix domain 63 115 2.3E-13 T 09-03-2017 LS838_RS06660 0d4b6973b111d166eff5b5a0e6674f42 178 Gene3D G3DSA:1.10.10.60 62 147 1.3E-9 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS06660 0d4b6973b111d166eff5b5a0e6674f42 178 Gene3D G3DSA:1.10.10.10 2 56 2.3E-6 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS04470 a4621bc5ca2c68408807672b462114f3 319 Pfam PF00288 GHMP kinases N terminal domain 88 144 2.1E-6 T 09-03-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 LS838_RS04470 a4621bc5ca2c68408807672b462114f3 319 Gene3D G3DSA:3.30.230.10 2 165 7.4E-59 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LS838_RS04470 a4621bc5ca2c68408807672b462114f3 319 TIGRFAM TIGR01240 mevDPdecarb: diphosphomevalonate decarboxylase 4 301 9.3E-91 T 09-03-2017 IPR029765 Diphosphomevalonate decarboxylase GO:0004163|GO:0005829|GO:0019287 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-2426168|Reactome: R-HSA-446199 LS838_RS04470 a4621bc5ca2c68408807672b462114f3 319 SUPERFAMILY SSF55060 170 310 1.73E-38 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain LS838_RS04470 a4621bc5ca2c68408807672b462114f3 319 SUPERFAMILY SSF54211 1 163 1.97E-39 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LS838_RS04470 a4621bc5ca2c68408807672b462114f3 319 PIRSF PIRSF015950 1 319 4.9E-111 T 09-03-2017 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-2426168|Reactome: R-HSA-446199 LS838_RS04470 a4621bc5ca2c68408807672b462114f3 319 Gene3D G3DSA:3.30.70.890 166 316 1.6E-49 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain LS838_RS04875 fa6768b65a4f1f7da455acedc52c0210 338 SUPERFAMILY SSF51412 2 336 3.36E-48 T 09-03-2017 LS838_RS04875 fa6768b65a4f1f7da455acedc52c0210 338 Pfam PF03060 Nitronate monooxygenase 5 332 1.5E-54 T 09-03-2017 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 LS838_RS04875 fa6768b65a4f1f7da455acedc52c0210 338 Gene3D G3DSA:3.20.20.70 1 329 2.8E-52 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LS838_RS09130 c6e0c845bb710fadcfdfbda70445978c 297 SUPERFAMILY SSF110849 38 129 3.14E-28 T 09-03-2017 IPR003115 ParB/Sulfiredoxin LS838_RS09130 c6e0c845bb710fadcfdfbda70445978c 297 SMART SM00470 38 127 1.0E-34 T 09-03-2017 IPR003115 ParB/Sulfiredoxin LS838_RS09130 c6e0c845bb710fadcfdfbda70445978c 297 Gene3D G3DSA:1.10.260.40 139 172 6.8E-5 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS09130 c6e0c845bb710fadcfdfbda70445978c 297 SUPERFAMILY SSF109709 119 229 7.59E-34 T 09-03-2017 LS838_RS09130 c6e0c845bb710fadcfdfbda70445978c 297 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 35 211 6.5E-60 T 09-03-2017 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 LS838_RS09130 c6e0c845bb710fadcfdfbda70445978c 297 Gene3D G3DSA:3.90.1530.10 28 133 4.5E-40 T 09-03-2017 LS838_RS09130 c6e0c845bb710fadcfdfbda70445978c 297 Pfam PF01381 Helix-turn-helix 146 172 3.9E-5 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LS838_RS09130 c6e0c845bb710fadcfdfbda70445978c 297 Pfam PF02195 ParB-like nuclease domain 40 126 7.9E-27 T 09-03-2017 IPR003115 ParB/Sulfiredoxin LS838_RS01665 6adf6fe3af694786cd7a256bf1d457fa 232 Gene3D G3DSA:3.10.580.10 12 124 3.3E-23 T 09-03-2017 LS838_RS01665 6adf6fe3af694786cd7a256bf1d457fa 232 SUPERFAMILY SSF54631 1 123 1.39E-20 T 09-03-2017 LS838_RS01665 6adf6fe3af694786cd7a256bf1d457fa 232 PIRSF PIRSF035040 1 216 3.8E-94 T 09-03-2017 IPR017036 Uncharacterised conserved protein UCP035040, CBS-type LS838_RS01665 6adf6fe3af694786cd7a256bf1d457fa 232 Pfam PF00571 CBS domain 13 57 1.3E-5 T 09-03-2017 IPR000644 CBS domain LS838_RS09275 787044af8989a73c41bd7a941c6c59eb 315 SUPERFAMILY SSF100950 58 310 1.76E-50 T 09-03-2017 LS838_RS09275 787044af8989a73c41bd7a941c6c59eb 315 Gene3D G3DSA:3.40.50.1360 53 311 4.9E-52 T 09-03-2017 LS838_RS09275 787044af8989a73c41bd7a941c6c59eb 315 Pfam PF04198 Putative sugar-binding domain 61 307 9.8E-43 T 09-03-2017 IPR007324 Sugar-binding domain, putative GO:0030246 LS838_RS02670 c2409da0ce89bdb8747fe6f26850c29a 212 SUPERFAMILY SSF81301 6 200 7.19E-61 T 09-03-2017 LS838_RS02670 c2409da0ce89bdb8747fe6f26850c29a 212 SMART SM00954 46 167 1.5E-47 T 09-03-2017 IPR007685 RelA/SpoT GO:0015969 LS838_RS02670 c2409da0ce89bdb8747fe6f26850c29a 212 Gene3D G3DSA:1.10.287.860 150 204 1.4E-25 T 09-03-2017 LS838_RS02670 c2409da0ce89bdb8747fe6f26850c29a 212 Gene3D G3DSA:3.30.460.10 6 147 2.0E-40 T 09-03-2017 LS838_RS02670 c2409da0ce89bdb8747fe6f26850c29a 212 Pfam PF04607 Region found in RelA / SpoT proteins 46 165 1.8E-38 T 09-03-2017 IPR007685 RelA/SpoT GO:0015969 LS838_RS06530 4e4354e982837ee46035852baa4f6eed 75 Pfam PF06014 Bacterial protein of unknown function (DUF910) 4 63 2.0E-29 T 09-03-2017 IPR009256 Protein of unknown function DUF910 LS838_RS06530 4e4354e982837ee46035852baa4f6eed 75 Gene3D G3DSA:1.10.287.760 4 70 1.4E-30 T 09-03-2017 IPR023164 YqgQ-like domain LS838_RS06530 4e4354e982837ee46035852baa4f6eed 75 SUPERFAMILY SSF158379 4 65 1.57E-24 T 09-03-2017 IPR023164 YqgQ-like domain LS838_RS02425 a1890f88e7cdb45a3a5414eaf990d580 306 SUPERFAMILY SSF53613 1 302 7.17E-82 T 09-03-2017 IPR029056 Ribokinase-like LS838_RS02425 a1890f88e7cdb45a3a5414eaf990d580 306 Gene3D G3DSA:3.40.1190.20 1 305 8.0E-91 T 09-03-2017 IPR029056 Ribokinase-like LS838_RS02425 a1890f88e7cdb45a3a5414eaf990d580 306 Hamap MF_01987 Ribokinase [rbsK]. 2 303 26.328 T 09-03-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 LS838_RS02425 a1890f88e7cdb45a3a5414eaf990d580 306 Pfam PF00294 pfkB family carbohydrate kinase 1 296 1.4E-66 T 09-03-2017 IPR011611 Carbohydrate kinase PfkB LS838_RS02425 a1890f88e7cdb45a3a5414eaf990d580 306 PRINTS PR00990 Ribokinase signature 33 52 5.1E-31 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LS838_RS02425 a1890f88e7cdb45a3a5414eaf990d580 306 PRINTS PR00990 Ribokinase signature 105 118 5.1E-31 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LS838_RS02425 a1890f88e7cdb45a3a5414eaf990d580 306 PRINTS PR00990 Ribokinase signature 6 27 5.1E-31 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LS838_RS02425 a1890f88e7cdb45a3a5414eaf990d580 306 PRINTS PR00990 Ribokinase signature 218 229 5.1E-31 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LS838_RS02425 a1890f88e7cdb45a3a5414eaf990d580 306 PRINTS PR00990 Ribokinase signature 174 189 5.1E-31 T 09-03-2017 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 LS838_RS02425 a1890f88e7cdb45a3a5414eaf990d580 306 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 4 301 3.1E-108 T 09-03-2017 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 LS838_RS02905 1e7de346fbb7932f7e9ebe25161e879d 252 Pfam PF00121 Triosephosphate isomerase 6 248 5.4E-97 T 09-03-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02905 1e7de346fbb7932f7e9ebe25161e879d 252 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 6 242 8.6E-61 T 09-03-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02905 1e7de346fbb7932f7e9ebe25161e879d 252 SUPERFAMILY SSF51351 1 250 3.01E-95 T 09-03-2017 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02905 1e7de346fbb7932f7e9ebe25161e879d 252 ProSitePatterns PS00171 Triosephosphate isomerase active site. 166 176 - T 09-03-2017 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02905 1e7de346fbb7932f7e9ebe25161e879d 252 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 251 40.076 T 09-03-2017 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 LS838_RS02905 1e7de346fbb7932f7e9ebe25161e879d 252 Gene3D G3DSA:3.20.20.70 3 250 2.2E-107 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LS838_RS01640 7ab9af8d470e8de54578dc4832821247 83 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 78 5.9E-20 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01640 7ab9af8d470e8de54578dc4832821247 83 Pfam PF01197 Ribosomal protein L31 1 78 3.7E-29 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01640 7ab9af8d470e8de54578dc4832821247 83 PRINTS PR01249 Ribosomal protein L31 signature 44 59 2.0E-19 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01640 7ab9af8d470e8de54578dc4832821247 83 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.0E-19 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01640 7ab9af8d470e8de54578dc4832821247 83 PRINTS PR01249 Ribosomal protein L31 signature 59 77 2.0E-19 T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01640 7ab9af8d470e8de54578dc4832821247 83 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 09-03-2017 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01640 7ab9af8d470e8de54578dc4832821247 83 SUPERFAMILY SSF143800 1 79 2.12E-23 T 09-03-2017 LS838_RS01640 7ab9af8d470e8de54578dc4832821247 83 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 26.17 T 09-03-2017 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS02745 ab3f992c09a2b8ac66b3f7ce5fbeda4e 187 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 59 81 - T 09-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 LS838_RS02745 ab3f992c09a2b8ac66b3f7ce5fbeda4e 187 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 81 4.7E-17 T 09-03-2017 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 LS838_RS02745 ab3f992c09a2b8ac66b3f7ce5fbeda4e 187 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 183 6.8E-49 T 09-03-2017 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 LS838_RS02745 ab3f992c09a2b8ac66b3f7ce5fbeda4e 187 PIRSF PIRSF000847 1 187 1.4E-50 T 09-03-2017 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 LS838_RS01445 36132cb3aa997d965dc4141315fca87c 335 SMART SM00870 5 320 1.0E-124 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 LS838_RS01445 36132cb3aa997d965dc4141315fca87c 335 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 78 88 - T 09-03-2017 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 LS838_RS01445 36132cb3aa997d965dc4141315fca87c 335 Gene3D G3DSA:3.40.50.1170 3 187 1.1E-60 T 09-03-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 LS838_RS01445 36132cb3aa997d965dc4141315fca87c 335 Pfam PF00710 Asparaginase, N-terminal 5 186 8.9E-57 T 09-03-2017 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 LS838_RS01445 36132cb3aa997d965dc4141315fca87c 335 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 332 4.3E-92 T 09-03-2017 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 LS838_RS01445 36132cb3aa997d965dc4141315fca87c 335 PRINTS PR00139 Asparaginase/glutaminase family signature 257 275 2.4E-15 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 LS838_RS01445 36132cb3aa997d965dc4141315fca87c 335 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 2.4E-15 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 LS838_RS01445 36132cb3aa997d965dc4141315fca87c 335 PRINTS PR00139 Asparaginase/glutaminase family signature 77 95 2.4E-15 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 LS838_RS01445 36132cb3aa997d965dc4141315fca87c 335 SUPERFAMILY SSF53774 2 333 1.83E-101 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 LS838_RS01445 36132cb3aa997d965dc4141315fca87c 335 PIRSF PIRSF500176 2 329 1.6E-103 T 09-03-2017 LS838_RS01445 36132cb3aa997d965dc4141315fca87c 335 PIRSF PIRSF001220 1 331 7.0E-90 T 09-03-2017 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 LS838_RS01445 36132cb3aa997d965dc4141315fca87c 335 Gene3D G3DSA:3.40.50.40 206 333 9.9E-45 T 09-03-2017 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 LS838_RS01445 36132cb3aa997d965dc4141315fca87c 335 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 09-03-2017 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 LS838_RS00615 3eb35c2bb416f4826c84bcca336a6990 252 SUPERFAMILY SSF51569 1 250 5.13E-74 T 09-03-2017 LS838_RS00615 3eb35c2bb416f4826c84bcca336a6990 252 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 17 244 1.8E-68 T 09-03-2017 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 LS838_RS00615 3eb35c2bb416f4826c84bcca336a6990 252 Pfam PF01487 Type I 3-dehydroquinase 20 245 5.6E-66 T 09-03-2017 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 LS838_RS00615 3eb35c2bb416f4826c84bcca336a6990 252 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 17 249 36.462 T 09-03-2017 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 LS838_RS00615 3eb35c2bb416f4826c84bcca336a6990 252 Gene3D G3DSA:3.20.20.70 2 250 3.4E-85 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LS838_RS00615 3eb35c2bb416f4826c84bcca336a6990 252 ProSitePatterns PS01028 Dehydroquinase class I active site. 115 145 - T 09-03-2017 IPR018508 3-dehydroquinate dehydratase, active site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 LS838_RS03625 4d379c2d34a8ea2722a56917f7c2b5fd 351 Gene3D G3DSA:3.40.50.300 2 249 4.2E-79 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03625 4d379c2d34a8ea2722a56917f7c2b5fd 351 Gene3D G3DSA:3.30.70.260 264 345 1.1E-18 T 09-03-2017 LS838_RS03625 4d379c2d34a8ea2722a56917f7c2b5fd 351 Pfam PF00005 ABC transporter 25 177 6.0E-34 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS03625 4d379c2d34a8ea2722a56917f7c2b5fd 351 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS03625 4d379c2d34a8ea2722a56917f7c2b5fd 351 SUPERFAMILY SSF55021 262 345 1.83E-15 T 09-03-2017 LS838_RS03625 4d379c2d34a8ea2722a56917f7c2b5fd 351 SMART SM00382 33 226 5.7E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS03625 4d379c2d34a8ea2722a56917f7c2b5fd 351 Pfam PF09383 NIL domain 272 342 2.4E-13 T 09-03-2017 IPR018449 NIL domain LS838_RS03625 4d379c2d34a8ea2722a56917f7c2b5fd 351 SMART SM00930 269 344 3.3E-19 T 09-03-2017 IPR018449 NIL domain LS838_RS03625 4d379c2d34a8ea2722a56917f7c2b5fd 351 SUPERFAMILY SSF52540 3 248 9.58E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03770 572ed2c80d35ad8012d763ecf8c8cea6 415 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 16 404 4.4E-140 T 09-03-2017 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 LS838_RS03770 572ed2c80d35ad8012d763ecf8c8cea6 415 Gene3D G3DSA:3.40.309.10 226 372 8.3E-41 T 09-03-2017 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 LS838_RS03770 572ed2c80d35ad8012d763ecf8c8cea6 415 Gene3D G3DSA:3.40.605.10 373 414 1.1E-89 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LS838_RS03770 572ed2c80d35ad8012d763ecf8c8cea6 415 Gene3D G3DSA:3.40.605.10 6 223 1.1E-89 T 09-03-2017 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 LS838_RS03770 572ed2c80d35ad8012d763ecf8c8cea6 415 SUPERFAMILY SSF53720 8 414 7.46E-106 T 09-03-2017 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 LS838_RS03770 572ed2c80d35ad8012d763ecf8c8cea6 415 PIRSF PIRSF000151 1 415 2.3E-170 T 09-03-2017 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 LS838_RS03770 572ed2c80d35ad8012d763ecf8c8cea6 415 Pfam PF00171 Aldehyde dehydrogenase family 24 281 2.1E-9 T 09-03-2017 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 LS838_RS03770 572ed2c80d35ad8012d763ecf8c8cea6 415 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 321 342 - T 09-03-2017 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 LS838_RS03770 572ed2c80d35ad8012d763ecf8c8cea6 415 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 5 414 38.896 T 09-03-2017 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 LS838_RS09800 aea81b1dbfa79309cd8229a1640490f7 312 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 27 90 1.0E-8 T 09-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 LS838_RS09800 aea81b1dbfa79309cd8229a1640490f7 312 Gene3D G3DSA:1.10.443.10 113 295 1.0E-35 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LS838_RS09800 aea81b1dbfa79309cd8229a1640490f7 312 Pfam PF00589 Phage integrase family 115 294 2.8E-22 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LS838_RS09800 aea81b1dbfa79309cd8229a1640490f7 312 SUPERFAMILY SSF56349 27 294 2.77E-40 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LS838_RS09800 aea81b1dbfa79309cd8229a1640490f7 312 Gene3D G3DSA:1.10.150.130 16 93 3.4E-11 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal LS838_RS01985 48cf976cbb3cdd20568cf8291f17b9b9 265 Pfam PF02361 Cobalt transport protein 14 235 6.4E-42 T 09-03-2017 IPR003339 ABC/ECF transporter, transmembrane component LS838_RS01985 48cf976cbb3cdd20568cf8291f17b9b9 265 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 1 264 33.506 T 09-03-2017 IPR024919 ECF transporter transmembrane protein EcfT GO:0005215|GO:0006810|GO:0016021 LS838_RS00165 3db385ef112c78414e5b53f955996abf 185 Pfam PF07155 ECF-type riboflavin transporter, S component 6 174 7.8E-17 T 09-03-2017 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 LS838_RS08395 e831a61794f0c920d9e969cfcafc89f1 281 SMART SM00892 88 273 9.4E-7 T 09-03-2017 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 LS838_RS08395 e831a61794f0c920d9e969cfcafc89f1 281 Pfam PF13930 DNA/RNA non-specific endonuclease 103 245 1.2E-14 T 09-03-2017 LS838_RS03425 703f87db204b838ea0141f40631e4edb 69 Gene3D G3DSA:2.40.50.140 1 66 9.1E-19 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS03425 703f87db204b838ea0141f40631e4edb 69 PIRSF PIRSF002599 1 69 5.6E-16 T 09-03-2017 IPR012156 Cold shock, CspA GO:0003676 LS838_RS03425 703f87db204b838ea0141f40631e4edb 69 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.6E-16 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LS838_RS03425 703f87db204b838ea0141f40631e4edb 69 SUPERFAMILY SSF50249 1 65 4.65E-15 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS03425 703f87db204b838ea0141f40631e4edb 69 PRINTS PR00050 Cold shock protein signature 40 58 1.0E-5 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LS838_RS03425 703f87db204b838ea0141f40631e4edb 69 PRINTS PR00050 Cold shock protein signature 4 19 1.0E-5 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LS838_RS03425 703f87db204b838ea0141f40631e4edb 69 PRINTS PR00050 Cold shock protein signature 25 34 1.0E-5 T 09-03-2017 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 LS838_RS03425 703f87db204b838ea0141f40631e4edb 69 SMART SM00357 3 67 3.6E-7 T 09-03-2017 IPR011129 Cold shock protein GO:0003676 LS838_RS07770 35780b746dd9626c9e03a8237e5dec21 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 62 2.9E-19 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LS838_RS07770 35780b746dd9626c9e03a8237e5dec21 255 SUPERFAMILY SSF100950 76 234 4.81E-26 T 09-03-2017 LS838_RS07770 35780b746dd9626c9e03a8237e5dec21 255 Gene3D G3DSA:1.10.10.10 1 55 2.3E-10 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS07770 35780b746dd9626c9e03a8237e5dec21 255 SMART SM01134 74 234 1.2E-53 T 09-03-2017 LS838_RS07770 35780b746dd9626c9e03a8237e5dec21 255 Gene3D G3DSA:3.40.50.1360 79 214 5.7E-10 T 09-03-2017 LS838_RS07770 35780b746dd9626c9e03a8237e5dec21 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.6E-10 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LS838_RS07770 35780b746dd9626c9e03a8237e5dec21 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.6E-10 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LS838_RS07770 35780b746dd9626c9e03a8237e5dec21 255 Pfam PF00455 DeoR C terminal sensor domain 76 232 4.1E-42 T 09-03-2017 IPR014036 DeoR C-terminal sensor domain LS838_RS07770 35780b746dd9626c9e03a8237e5dec21 255 SUPERFAMILY SSF46785 5 69 8.16E-14 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS07770 35780b746dd9626c9e03a8237e5dec21 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 09-03-2017 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 LS838_RS07770 35780b746dd9626c9e03a8237e5dec21 255 SMART SM00420 6 58 1.5E-19 T 09-03-2017 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 LS838_RS07165 f7d02c931f6984a00888e71c4e6f945f 228 Gene3D G3DSA:1.10.10.10 6 77 1.1E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS07165 f7d02c931f6984a00888e71c4e6f945f 228 Gene3D G3DSA:3.40.50.720 78 210 1.0E-52 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS07165 f7d02c931f6984a00888e71c4e6f945f 228 SMART SM00881 80 181 5.6E-22 T 09-03-2017 IPR003781 CoA-binding GO:0048037 LS838_RS07165 f7d02c931f6984a00888e71c4e6f945f 228 Pfam PF06971 Putative DNA-binding protein N-terminus 7 54 1.3E-19 T 09-03-2017 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 LS838_RS07165 f7d02c931f6984a00888e71c4e6f945f 228 Pfam PF02629 CoA binding domain 84 179 3.8E-29 T 09-03-2017 IPR003781 CoA-binding GO:0048037 LS838_RS07165 f7d02c931f6984a00888e71c4e6f945f 228 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 2 210 40.571 T 09-03-2017 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 LS838_RS07165 f7d02c931f6984a00888e71c4e6f945f 228 SUPERFAMILY SSF46785 8 79 1.38E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS07165 f7d02c931f6984a00888e71c4e6f945f 228 SUPERFAMILY SSF51735 84 207 5.32E-29 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS07200 233d1a17496f42909feda777a86d25d9 287 Gene3D G3DSA:3.30.950.10 122 234 5.2E-43 T 09-03-2017 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LS838_RS07200 233d1a17496f42909feda777a86d25d9 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 92 103 - T 09-03-2017 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LS838_RS07200 233d1a17496f42909feda777a86d25d9 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 14 233 37.098 T 09-03-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LS838_RS07200 233d1a17496f42909feda777a86d25d9 287 SUPERFAMILY SSF53790 13 231 3.66E-83 T 09-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LS838_RS07200 233d1a17496f42909feda777a86d25d9 287 Gene3D G3DSA:1.10.10.60 236 283 1.1E-5 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS07200 233d1a17496f42909feda777a86d25d9 287 PIRSF PIRSF005917 2 287 5.9E-106 T 09-03-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LS838_RS07200 233d1a17496f42909feda777a86d25d9 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 15 283 1.2E-82 T 09-03-2017 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 LS838_RS07200 233d1a17496f42909feda777a86d25d9 287 Gene3D G3DSA:3.40.1010.10 13 121 9.2E-14 T 09-03-2017 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LS838_RS07200 233d1a17496f42909feda777a86d25d9 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 214 1.9E-26 T 09-03-2017 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 LS838_RS01335 6366127ace1dc193e4243f85ddcb2e09 437 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 64 75 - T 09-03-2017 IPR000169 Cysteine peptidase, cysteine active site LS838_RS01335 6366127ace1dc193e4243f85ddcb2e09 437 SUPERFAMILY SSF54001 1 436 9.83E-134 T 09-03-2017 LS838_RS01335 6366127ace1dc193e4243f85ddcb2e09 437 Pfam PF03051 Peptidase C1-like family 4 437 3.9E-203 T 09-03-2017 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 LS838_RS01335 6366127ace1dc193e4243f85ddcb2e09 437 PIRSF PIRSF005700 1 437 7.0E-168 T 09-03-2017 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 LS838_RS01335 6366127ace1dc193e4243f85ddcb2e09 437 Gene3D G3DSA:3.90.70.10 52 436 8.8E-159 T 09-03-2017 LS838_RS01335 6366127ace1dc193e4243f85ddcb2e09 437 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 359 369 - T 09-03-2017 IPR025660 Cysteine peptidase, histidine active site Reactome: R-HSA-2132295 LS838_RS07360 334bf565b47cac3433c7631e2127d68b 281 SUPERFAMILY SSF161098 3 273 4.3E-60 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS07360 334bf565b47cac3433c7631e2127d68b 281 Gene3D G3DSA:1.10.3720.10 3 267 5.1E-54 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS07360 334bf565b47cac3433c7631e2127d68b 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 273 8.7E-19 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS02645 bec02cab67adff92eeef887f1be47984 134 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 1.9E-37 T 09-03-2017 IPR006504 Transcriptional regulator Spx/MgsR LS838_RS02645 bec02cab67adff92eeef887f1be47984 134 Gene3D G3DSA:3.40.30.10 1 124 1.2E-36 T 09-03-2017 IPR012336 Thioredoxin-like fold LS838_RS02645 bec02cab67adff92eeef887f1be47984 134 Pfam PF03960 ArsC family 5 113 3.3E-24 T 09-03-2017 IPR006660 Arsenate reductase-like LS838_RS02645 bec02cab67adff92eeef887f1be47984 134 Hamap MF_01132 Regulatory protein Spx [spxA]. 1 131 36.315 T 09-03-2017 IPR023731 Regulatory protein Spx GO:0045892 LS838_RS02645 bec02cab67adff92eeef887f1be47984 134 SUPERFAMILY SSF52833 1 126 4.82E-40 T 09-03-2017 IPR012336 Thioredoxin-like fold LS838_RS08530 08f9288fc60bb65c646458d010c92be2 235 Pfam PF04892 VanZ like family 38 168 2.0E-14 T 09-03-2017 IPR006976 VanZ-like LS838_RS07100 f4acc6b52160adfdc926ce7d5f5d236f 85 PIRSF PIRSF037258 1 85 4.3E-45 T 09-03-2017 IPR009309 Uncharacterised protein family UPF0297 LS838_RS07100 f4acc6b52160adfdc926ce7d5f5d236f 85 Pfam PF06135 Bacterial protein of unknown function (DUF965) 5 81 8.8E-38 T 09-03-2017 IPR009309 Uncharacterised protein family UPF0297 LS838_RS07100 f4acc6b52160adfdc926ce7d5f5d236f 85 Hamap MF_01507 UPF0297 protein . 1 84 27.772 T 09-03-2017 IPR009309 Uncharacterised protein family UPF0297 LS838_RS09690 b4e97b72dbb337f376a46a86529b6d1c 365 Gene3D G3DSA:3.40.50.2300 167 330 3.3E-50 T 09-03-2017 LS838_RS09690 b4e97b72dbb337f376a46a86529b6d1c 365 SUPERFAMILY SSF53822 43 317 1.86E-16 T 09-03-2017 IPR028082 Periplasmic binding protein-like I LS838_RS09690 b4e97b72dbb337f376a46a86529b6d1c 365 Pfam PF02608 Basic membrane protein 47 358 1.6E-60 T 09-03-2017 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 LS838_RS09690 b4e97b72dbb337f376a46a86529b6d1c 365 Gene3D G3DSA:3.40.50.2300 39 166 1.2E-44 T 09-03-2017 LS838_RS01110 7b192a104c3e90bf61509e898e180d28 466 Pfam PF00149 Calcineurin-like phosphoesterase 133 392 1.8E-10 T 09-03-2017 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 LS838_RS01110 7b192a104c3e90bf61509e898e180d28 466 SUPERFAMILY SSF56300 129 345 8.16E-33 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like LS838_RS01110 7b192a104c3e90bf61509e898e180d28 466 SUPERFAMILY SSF56300 378 448 8.16E-33 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like LS838_RS01110 7b192a104c3e90bf61509e898e180d28 466 Gene3D G3DSA:3.60.21.10 382 406 2.0E-24 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like LS838_RS01110 7b192a104c3e90bf61509e898e180d28 466 Gene3D G3DSA:3.60.21.10 129 350 2.0E-24 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like LS838_RS06475 9ab1a9b60a816011af27fac3953d1aa0 309 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 282 1.7E-84 T 09-03-2017 IPR003797 DegV LS838_RS06475 9ab1a9b60a816011af27fac3953d1aa0 309 Gene3D G3DSA:3.30.1180.10 154 285 5.1E-31 T 09-03-2017 LS838_RS06475 9ab1a9b60a816011af27fac3953d1aa0 309 SUPERFAMILY SSF82549 1 284 1.94E-81 T 09-03-2017 LS838_RS06475 9ab1a9b60a816011af27fac3953d1aa0 309 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 283 7.6E-72 T 09-03-2017 IPR003797 DegV LS838_RS06475 9ab1a9b60a816011af27fac3953d1aa0 309 Gene3D G3DSA:3.40.50.10170 1 151 1.2E-44 T 09-03-2017 LS838_RS01515 f4ae8868ddc9915a6183702f8dee3b71 95 Pfam PF08951 Enterocin A Immunity 11 81 6.2E-11 T 09-03-2017 IPR015046 Enterocin A Immunity LS838_RS01515 f4ae8868ddc9915a6183702f8dee3b71 95 Gene3D G3DSA:1.20.1470.10 11 84 1.6E-9 T 09-03-2017 LS838_RS01515 f4ae8868ddc9915a6183702f8dee3b71 95 SUPERFAMILY SSF109797 8 90 3.4E-17 T 09-03-2017 LS838_RS02320 3ff24ef832feaef91390133012223f8c 540 SUPERFAMILY SSF52540 296 518 7.8E-35 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02320 3ff24ef832feaef91390133012223f8c 540 SUPERFAMILY SSF52540 125 249 4.39E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02320 3ff24ef832feaef91390133012223f8c 540 SUPERFAMILY SSF52540 2 92 4.39E-43 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02320 3ff24ef832feaef91390133012223f8c 540 Pfam PF00005 ABC transporter 335 469 1.1E-12 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS02320 3ff24ef832feaef91390133012223f8c 540 Pfam PF00005 ABC transporter 18 184 2.4E-23 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS02320 3ff24ef832feaef91390133012223f8c 540 Gene3D G3DSA:3.40.50.300 320 535 1.1E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02320 3ff24ef832feaef91390133012223f8c 540 SMART SM00382 26 238 9.4E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS02320 3ff24ef832feaef91390133012223f8c 540 SMART SM00382 344 514 1.3 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS02320 3ff24ef832feaef91390133012223f8c 540 Gene3D G3DSA:3.40.50.300 2 271 7.3E-51 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02320 3ff24ef832feaef91390133012223f8c 540 Pfam PF12848 ABC transporter 224 309 5.3E-22 T 09-03-2017 IPR032781 ABC-transporter extension domain LS838_RS03065 fac4acfccc9035603f40d5e745c18d2c 173 PIRSF PIRSF019083 4 172 1.5E-52 T 09-03-2017 IPR016747 Phosphotransbutyrylase LS838_RS03065 fac4acfccc9035603f40d5e745c18d2c 173 Pfam PF04892 VanZ like family 14 159 4.3E-18 T 09-03-2017 IPR006976 VanZ-like LS838_RS01075 f2194381d4dceb59cc053f843e70966e 157 Gene3D G3DSA:3.40.50.620 7 148 2.7E-34 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS01075 f2194381d4dceb59cc053f843e70966e 157 SUPERFAMILY SSF52402 7 151 1.93E-30 T 09-03-2017 LS838_RS01075 f2194381d4dceb59cc053f843e70966e 157 Pfam PF00582 Universal stress protein family 7 148 2.1E-27 T 09-03-2017 IPR006016 UspA GO:0006950 LS838_RS01075 f2194381d4dceb59cc053f843e70966e 157 PRINTS PR01438 Universal stress protein signature 108 120 4.1E-16 T 09-03-2017 IPR006015 Universal stress protein A LS838_RS01075 f2194381d4dceb59cc053f843e70966e 157 PRINTS PR01438 Universal stress protein signature 5 23 4.1E-16 T 09-03-2017 IPR006015 Universal stress protein A LS838_RS01075 f2194381d4dceb59cc053f843e70966e 157 PRINTS PR01438 Universal stress protein signature 126 148 4.1E-16 T 09-03-2017 IPR006015 Universal stress protein A LS838_RS07385 3f3bb0727f5df0b309ce5d028f7152e1 169 SUPERFAMILY SSF160369 5 163 2.09E-47 T 09-03-2017 LS838_RS07385 3f3bb0727f5df0b309ce5d028f7152e1 169 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 4 164 25.347 T 09-03-2017 IPR022973 Ribosomal protein L10 LS838_RS07385 3f3bb0727f5df0b309ce5d028f7152e1 169 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 20 147 0.001 T 09-03-2017 LS838_RS07385 3f3bb0727f5df0b309ce5d028f7152e1 169 ProSitePatterns PS01109 Ribosomal protein L10 signature. 9 43 - T 09-03-2017 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS07385 3f3bb0727f5df0b309ce5d028f7152e1 169 Pfam PF00466 Ribosomal protein L10 6 104 2.9E-25 T 09-03-2017 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 LS838_RS07520 160db833d0906c559461c66c6667491d 406 SUPERFAMILY SSF56059 103 309 4.6E-27 T 09-03-2017 LS838_RS07520 160db833d0906c559461c66c6667491d 406 Gene3D G3DSA:3.30.470.20 106 330 5.5E-17 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LS838_RS07520 160db833d0906c559461c66c6667491d 406 Pfam PF02222 ATP-grasp domain 120 191 3.6E-5 T 09-03-2017 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type LS838_RS01800 cf54861c28b3259f2d9960cd5dfe8654 1221 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 474 1.3E-36 T 09-03-2017 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01800 cf54861c28b3259f2d9960cd5dfe8654 1221 Gene3D G3DSA:2.40.50.100 975 1030 1.4E-5 T 09-03-2017 LS838_RS01800 cf54861c28b3259f2d9960cd5dfe8654 1221 Gene3D G3DSA:2.40.40.20 338 365 2.2E-34 T 09-03-2017 LS838_RS01800 cf54861c28b3259f2d9960cd5dfe8654 1221 Gene3D G3DSA:2.40.40.20 406 476 2.2E-34 T 09-03-2017 LS838_RS01800 cf54861c28b3259f2d9960cd5dfe8654 1221 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 5 1196 10.314 T 09-03-2017 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01800 cf54861c28b3259f2d9960cd5dfe8654 1221 SUPERFAMILY SSF64484 5 1187 0.0 T 09-03-2017 LS838_RS01800 cf54861c28b3259f2d9960cd5dfe8654 1221 Pfam PF04997 RNA polymerase Rpb1, domain 1 5 331 1.5E-87 T 09-03-2017 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01800 cf54861c28b3259f2d9960cd5dfe8654 1221 SMART SM00663 224 503 6.7E-173 T 09-03-2017 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01800 cf54861c28b3259f2d9960cd5dfe8654 1221 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1187 0.0 T 09-03-2017 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01800 cf54861c28b3259f2d9960cd5dfe8654 1221 Pfam PF04998 RNA polymerase Rpb1, domain 5 773 1134 2.4E-55 T 09-03-2017 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01800 cf54861c28b3259f2d9960cd5dfe8654 1221 Pfam PF05000 RNA polymerase Rpb1, domain 4 697 758 1.3E-11 T 09-03-2017 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS01800 cf54861c28b3259f2d9960cd5dfe8654 1221 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 666 2.4E-26 T 09-03-2017 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 LS838_RS07315 ec9c594e4bd9588fff6517c0eb93b441 90 Gene3D G3DSA:4.10.520.10 1 90 3.1E-40 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LS838_RS07315 ec9c594e4bd9588fff6517c0eb93b441 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.2E-37 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LS838_RS07315 ec9c594e4bd9588fff6517c0eb93b441 90 SMART SM00411 1 90 2.0E-49 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LS838_RS07315 ec9c594e4bd9588fff6517c0eb93b441 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 09-03-2017 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 LS838_RS07315 ec9c594e4bd9588fff6517c0eb93b441 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 7.4E-22 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LS838_RS07315 ec9c594e4bd9588fff6517c0eb93b441 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 7.4E-22 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LS838_RS07315 ec9c594e4bd9588fff6517c0eb93b441 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 7.4E-22 T 09-03-2017 IPR000119 Histone-like DNA-binding protein GO:0003677 LS838_RS07315 ec9c594e4bd9588fff6517c0eb93b441 90 SUPERFAMILY SSF47729 1 90 6.48E-35 T 09-03-2017 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 LS838_RS08240 5506023722c3ca4fa37f027428e67d61 407 SUPERFAMILY SSF55909 1 407 3.03E-133 T 09-03-2017 LS838_RS08240 5506023722c3ca4fa37f027428e67d61 407 PRINTS PR01466 Bacterial arginine deiminase signature 3 23 3.8E-54 T 09-03-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 LS838_RS08240 5506023722c3ca4fa37f027428e67d61 407 PRINTS PR01466 Bacterial arginine deiminase signature 152 170 3.8E-54 T 09-03-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 LS838_RS08240 5506023722c3ca4fa37f027428e67d61 407 PRINTS PR01466 Bacterial arginine deiminase signature 363 377 3.8E-54 T 09-03-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 LS838_RS08240 5506023722c3ca4fa37f027428e67d61 407 PRINTS PR01466 Bacterial arginine deiminase signature 180 195 3.8E-54 T 09-03-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 LS838_RS08240 5506023722c3ca4fa37f027428e67d61 407 PRINTS PR01466 Bacterial arginine deiminase signature 343 360 3.8E-54 T 09-03-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 LS838_RS08240 5506023722c3ca4fa37f027428e67d61 407 PRINTS PR01466 Bacterial arginine deiminase signature 386 404 3.8E-54 T 09-03-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 LS838_RS08240 5506023722c3ca4fa37f027428e67d61 407 PIRSF PIRSF006356 1 407 7.5E-148 T 09-03-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 LS838_RS08240 5506023722c3ca4fa37f027428e67d61 407 Gene3D G3DSA:1.10.3930.10 70 152 3.2E-11 T 09-03-2017 LS838_RS08240 5506023722c3ca4fa37f027428e67d61 407 Pfam PF02274 Amidinotransferase 19 404 5.3E-96 T 09-03-2017 LS838_RS08240 5506023722c3ca4fa37f027428e67d61 407 Gene3D G3DSA:3.75.10.10 153 407 1.9E-132 T 09-03-2017 LS838_RS08240 5506023722c3ca4fa37f027428e67d61 407 Gene3D G3DSA:3.75.10.10 2 68 1.9E-132 T 09-03-2017 LS838_RS08240 5506023722c3ca4fa37f027428e67d61 407 TIGRFAM TIGR01078 arcA: arginine deiminase 5 407 9.3E-156 T 09-03-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 LS838_RS08240 5506023722c3ca4fa37f027428e67d61 407 Hamap MF_00242 Arginine deiminase [arcA]. 2 407 44.274 T 09-03-2017 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 LS838_RS01145 3c3759b9afd1505c686466e9fe37d24b 406 Gene3D G3DSA:1.20.1250.20 220 398 5.1E-19 T 09-03-2017 LS838_RS01145 3c3759b9afd1505c686466e9fe37d24b 406 Gene3D G3DSA:1.20.1250.20 18 201 5.0E-23 T 09-03-2017 LS838_RS01145 3c3759b9afd1505c686466e9fe37d24b 406 SUPERFAMILY SSF103473 13 400 8.24E-51 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS01145 3c3759b9afd1505c686466e9fe37d24b 406 Pfam PF07690 Major Facilitator Superfamily 290 394 5.4E-13 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LS838_RS01145 3c3759b9afd1505c686466e9fe37d24b 406 Pfam PF07690 Major Facilitator Superfamily 23 276 1.5E-15 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LS838_RS06465 59d434525cef17453fcf1741e6dc888c 330 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 4 327 1.2E-82 T 09-03-2017 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 LS838_RS06465 59d434525cef17453fcf1741e6dc888c 330 Pfam PF00962 Adenosine/AMP deaminase 4 325 6.4E-60 T 09-03-2017 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 LS838_RS06465 59d434525cef17453fcf1741e6dc888c 330 SUPERFAMILY SSF51556 4 329 4.86E-73 T 09-03-2017 IPR032466 Metal-dependent hydrolase LS838_RS06465 59d434525cef17453fcf1741e6dc888c 330 Gene3D G3DSA:3.20.20.140 1 330 2.8E-92 T 09-03-2017 LS838_RS04955 1817053db197ad9b38bddd04ee4355dd 212 Pfam PF13460 NAD(P)H-binding 7 188 1.7E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS04955 1817053db197ad9b38bddd04ee4355dd 212 SUPERFAMILY SSF51735 1 202 4.48E-34 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS04955 1817053db197ad9b38bddd04ee4355dd 212 Gene3D G3DSA:3.40.50.720 1 210 1.2E-36 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS09745 fb0cc2205af5c366ff070aad0053d3cd 280 Gene3D G3DSA:3.20.20.100 7 266 1.9E-76 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain LS838_RS09745 fb0cc2205af5c366ff070aad0053d3cd 280 SUPERFAMILY SSF51430 6 268 2.36E-78 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain LS838_RS09745 fb0cc2205af5c366ff070aad0053d3cd 280 PRINTS PR00069 Aldo-keto reductase signature 38 62 3.4E-16 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LS838_RS09745 fb0cc2205af5c366ff070aad0053d3cd 280 PRINTS PR00069 Aldo-keto reductase signature 202 226 3.4E-16 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LS838_RS09745 fb0cc2205af5c366ff070aad0053d3cd 280 PRINTS PR00069 Aldo-keto reductase signature 125 142 3.4E-16 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LS838_RS09745 fb0cc2205af5c366ff070aad0053d3cd 280 PRINTS PR00069 Aldo-keto reductase signature 95 113 3.4E-16 T 09-03-2017 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 LS838_RS09745 fb0cc2205af5c366ff070aad0053d3cd 280 Pfam PF00248 Aldo/keto reductase family 14 266 5.6E-53 T 09-03-2017 IPR023210 NADP-dependent oxidoreductase domain LS838_RS09685 13349b22d0839a2cffe27c114ca4faab 198 Pfam PF11611 Domain of unknown function (DUF4352) 74 191 9.5E-29 T 09-03-2017 IPR029051 Domain of unknown function DUF4352 LS838_RS09685 13349b22d0839a2cffe27c114ca4faab 198 Gene3D G3DSA:2.60.40.1240 73 198 6.4E-34 T 09-03-2017 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain LS838_RS07780 aeea0ddda80c881e4773aefa819dfebd 488 PIRSF PIRSF006005 1 487 6.9E-213 T 09-03-2017 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS07780 aeea0ddda80c881e4773aefa819dfebd 488 ProSitePatterns PS01163 Galactose-1-phosphate uridyl transferase family 2 signature. 249 266 - T 09-03-2017 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS07780 aeea0ddda80c881e4773aefa819dfebd 488 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 236 430 2.7E-25 T 09-03-2017 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 LS838_RS07780 aeea0ddda80c881e4773aefa819dfebd 488 TIGRFAM TIGR01239 galT_2: galactose-1-phosphate uridylyltransferase 3 484 3.1E-197 T 09-03-2017 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS07780 aeea0ddda80c881e4773aefa819dfebd 488 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 15 221 3.0E-30 T 09-03-2017 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 LS838_RS07780 aeea0ddda80c881e4773aefa819dfebd 488 Hamap MF_00571 Galactose-1-phosphate uridylyltransferase [galT]. 1 488 250.266 T 09-03-2017 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS03825 3fe23509ba3c5f9d78c36e34eb1618ce 244 Gene3D G3DSA:1.10.10.580 186 240 1.9E-4 T 09-03-2017 IPR023093 Rad21/Rec8-like protein, C-terminal LS838_RS03825 3fe23509ba3c5f9d78c36e34eb1618ce 244 Gene3D G3DSA:3.30.1360.100 150 185 1.4E-4 T 09-03-2017 IPR023229 Type II secretion system protein M, periplasmic domain LS838_RS03825 3fe23509ba3c5f9d78c36e34eb1618ce 244 Hamap MF_01805 Segregation and condensation protein A [scpA]. 6 241 21.738 T 09-03-2017 IPR003768 Segregation and condensation protein A LS838_RS03825 3fe23509ba3c5f9d78c36e34eb1618ce 244 Pfam PF02616 Segregation and condensation protein ScpA 23 238 1.7E-31 T 09-03-2017 IPR003768 Segregation and condensation protein A LS838_RS06305 f503a6b625c2ee069473da31008ab66d 103 SUPERFAMILY SSF141091 1 102 1.18E-36 T 09-03-2017 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06305 f503a6b625c2ee069473da31008ab66d 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 5.7E-41 T 09-03-2017 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06305 f503a6b625c2ee069473da31008ab66d 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 9.4E-39 T 09-03-2017 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06305 f503a6b625c2ee069473da31008ab66d 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.404 T 09-03-2017 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06305 f503a6b625c2ee069473da31008ab66d 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 09-03-2017 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS05175 c6f2989d1445c8fa2d29e8857a819eae 195 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 51 68 - T 09-03-2017 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 LS838_RS05175 c6f2989d1445c8fa2d29e8857a819eae 195 SUPERFAMILY SSF50891 16 117 1.3E-63 T 09-03-2017 IPR029000 Cyclophilin-like domain LS838_RS05175 c6f2989d1445c8fa2d29e8857a819eae 195 SUPERFAMILY SSF50891 145 194 1.3E-63 T 09-03-2017 IPR029000 Cyclophilin-like domain LS838_RS05175 c6f2989d1445c8fa2d29e8857a819eae 195 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 18 192 1.6E-54 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LS838_RS05175 c6f2989d1445c8fa2d29e8857a819eae 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 8.9E-20 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LS838_RS05175 c6f2989d1445c8fa2d29e8857a819eae 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 56 68 8.9E-20 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LS838_RS05175 c6f2989d1445c8fa2d29e8857a819eae 195 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 30 45 8.9E-20 T 09-03-2017 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 LS838_RS05175 c6f2989d1445c8fa2d29e8857a819eae 195 Gene3D G3DSA:2.40.100.10 6 194 2.4E-72 T 09-03-2017 IPR029000 Cyclophilin-like domain LS838_RS04560 9e4fd5a7d0fcb0a3ee31fadd98976429 374 SMART SM00981 57 155 0.0036 T 09-03-2017 IPR004114 THUMP domain GO:0003723 LS838_RS04560 9e4fd5a7d0fcb0a3ee31fadd98976429 374 SUPERFAMILY SSF53335 143 218 2.32E-34 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS04560 9e4fd5a7d0fcb0a3ee31fadd98976429 374 SUPERFAMILY SSF53335 254 361 2.32E-34 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS04560 9e4fd5a7d0fcb0a3ee31fadd98976429 374 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 196 207 - T 09-03-2017 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS04560 9e4fd5a7d0fcb0a3ee31fadd98976429 374 Pfam PF01170 Putative RNA methylase family UPF0020 163 365 1.8E-53 T 09-03-2017 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 LS838_RS04560 9e4fd5a7d0fcb0a3ee31fadd98976429 374 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 299 305 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LS838_RS04560 9e4fd5a7d0fcb0a3ee31fadd98976429 374 Pfam PF02926 THUMP domain 33 121 3.2E-5 T 09-03-2017 IPR004114 THUMP domain GO:0003723 LS838_RS04560 9e4fd5a7d0fcb0a3ee31fadd98976429 374 Gene3D G3DSA:3.40.50.150 147 215 5.0E-27 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS04560 9e4fd5a7d0fcb0a3ee31fadd98976429 374 Gene3D G3DSA:3.40.50.150 251 372 5.0E-27 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS05305 dd546eefb69dc34aa3700391712460b3 250 PIRSF PIRSF016933 13 244 5.6E-39 T 09-03-2017 IPR023596 Peptidase PrsW, archaeal/bacterial GO:0008233 LS838_RS05305 dd546eefb69dc34aa3700391712460b3 250 Pfam PF13367 Protease prsW family 44 224 4.2E-30 T 09-03-2017 IPR026898 Protease PrsW GO:0008233 LS838_RS04465 9b168ab0448ebaf89e4afa1c247fbf4e 360 Pfam PF00288 GHMP kinases N terminal domain 104 172 5.2E-16 T 09-03-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 LS838_RS04465 9b168ab0448ebaf89e4afa1c247fbf4e 360 SUPERFAMILY SSF54211 2 228 2.81E-46 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LS838_RS04465 9b168ab0448ebaf89e4afa1c247fbf4e 360 TIGRFAM TIGR01220 Pmev_kin_Gr_pos: phosphomevalonate kinase 2 355 1.6E-127 T 09-03-2017 IPR005917 Phosphomevalonate kinase, Gram-positive KEGG: 00900+2.7.4.2|MetaCyc: PWY-7391|MetaCyc: PWY-922 LS838_RS04465 9b168ab0448ebaf89e4afa1c247fbf4e 360 Gene3D G3DSA:3.30.230.10 2 209 1.3E-75 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LS838_RS04465 9b168ab0448ebaf89e4afa1c247fbf4e 360 SUPERFAMILY SSF55060 211 353 4.08E-32 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain LS838_RS04465 9b168ab0448ebaf89e4afa1c247fbf4e 360 Gene3D G3DSA:3.30.70.890 212 356 7.4E-43 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain LS838_RS04465 9b168ab0448ebaf89e4afa1c247fbf4e 360 PRINTS PR00959 Mevalonate kinase family signature 312 329 1.1E-6 T 09-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS04465 9b168ab0448ebaf89e4afa1c247fbf4e 360 PRINTS PR00959 Mevalonate kinase family signature 6 30 1.1E-6 T 09-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS04465 9b168ab0448ebaf89e4afa1c247fbf4e 360 PRINTS PR00959 Mevalonate kinase family signature 110 132 1.1E-6 T 09-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS04465 9b168ab0448ebaf89e4afa1c247fbf4e 360 Pfam PF08544 GHMP kinases C terminal 270 341 9.7E-10 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain LS838_RS06550 f11fa7c11e1f72a20e554b9bfbadeb8d 704 SUPERFAMILY SSF56519 185 318 3.4E-32 T 09-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LS838_RS06550 f11fa7c11e1f72a20e554b9bfbadeb8d 704 SUPERFAMILY SSF56519 63 124 3.4E-32 T 09-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LS838_RS06550 f11fa7c11e1f72a20e554b9bfbadeb8d 704 Gene3D G3DSA:3.40.710.10 319 695 5.5E-59 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS06550 f11fa7c11e1f72a20e554b9bfbadeb8d 704 Gene3D G3DSA:3.90.1310.10 202 318 9.4E-24 T 09-03-2017 LS838_RS06550 f11fa7c11e1f72a20e554b9bfbadeb8d 704 Pfam PF00905 Penicillin binding protein transpeptidase domain 352 686 1.1E-53 T 09-03-2017 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 LS838_RS06550 f11fa7c11e1f72a20e554b9bfbadeb8d 704 SUPERFAMILY SSF56601 320 697 5.41E-54 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS06550 f11fa7c11e1f72a20e554b9bfbadeb8d 704 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 304 1.8E-35 T 09-03-2017 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 LS838_RS01845 a720f78e87204d723c4134da8c73b83a 98 SUPERFAMILY SSF54189 1 87 2.23E-29 T 09-03-2017 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01845 a720f78e87204d723c4134da8c73b83a 98 Gene3D G3DSA:3.30.70.330 1 93 9.7E-32 T 09-03-2017 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 LS838_RS01845 a720f78e87204d723c4134da8c73b83a 98 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 94 21.458 T 09-03-2017 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 LS838_RS01845 a720f78e87204d723c4134da8c73b83a 98 Pfam PF00276 Ribosomal protein L23 5 86 3.4E-31 T 09-03-2017 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 LS838_RS04730 aac1e59dc361fa5db0d469fc295115c7 544 Gene3D G3DSA:3.10.105.10 289 511 3.6E-39 T 09-03-2017 LS838_RS04730 aac1e59dc361fa5db0d469fc295115c7 544 Gene3D G3DSA:3.90.76.10 44 217 1.6E-40 T 09-03-2017 LS838_RS04730 aac1e59dc361fa5db0d469fc295115c7 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 463 1.4E-62 T 09-03-2017 IPR000914 Solute-binding protein family 5 domain LS838_RS04730 aac1e59dc361fa5db0d469fc295115c7 544 PIRSF PIRSF002741 1 542 7.7E-85 T 09-03-2017 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 LS838_RS04730 aac1e59dc361fa5db0d469fc295115c7 544 SUPERFAMILY SSF53850 29 528 2.71E-101 T 09-03-2017 LS838_RS09670 636f5e987b09a5b3c25191f9398a23f8 411 Gene3D G3DSA:3.30.565.10 283 408 3.1E-4 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS09670 636f5e987b09a5b3c25191f9398a23f8 411 Pfam PF14501 GHKL domain 302 410 4.8E-13 T 09-03-2017 IPR032834 Sensor histidine kinase NatK, C-terminal domain LS838_RS09670 636f5e987b09a5b3c25191f9398a23f8 411 SUPERFAMILY SSF55874 271 410 4.77E-7 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS09125 cc655e28e4e5160370fcbeaef6bad4ae 87 Pfam PF06107 Bacterial protein of unknown function (DUF951) 7 60 2.3E-29 T 09-03-2017 IPR009296 Protein of unknown function DUF951 LS838_RS04400 14a0337f51d5fd5f831c3d9d6bbf1e6f 101 SUPERFAMILY SSF141868 4 101 1.57E-27 T 09-03-2017 IPR001633 EAL domain LS838_RS04400 14a0337f51d5fd5f831c3d9d6bbf1e6f 101 Gene3D G3DSA:3.20.20.450 3 101 7.7E-28 T 09-03-2017 IPR001633 EAL domain LS838_RS04400 14a0337f51d5fd5f831c3d9d6bbf1e6f 101 Pfam PF00563 EAL domain 6 101 3.6E-21 T 09-03-2017 IPR001633 EAL domain LS838_RS00195 92ccaa30dd28fd2434a24cf09dd61c8c 62 SUPERFAMILY SSF55331 2 57 1.31E-15 T 09-03-2017 IPR014347 Tautomerase/MIF superfamily LS838_RS00195 92ccaa30dd28fd2434a24cf09dd61c8c 62 Gene3D G3DSA:3.30.429.20 1 57 2.0E-19 T 09-03-2017 LS838_RS00195 92ccaa30dd28fd2434a24cf09dd61c8c 62 Pfam PF01361 Tautomerase enzyme 2 56 1.5E-14 T 09-03-2017 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 LS838_RS00315 cd53d3268ae74538f72614427464d86b 262 SUPERFAMILY SSF158911 26 144 5.23E-22 T 09-03-2017 LS838_RS00315 cd53d3268ae74538f72614427464d86b 262 SMART SM00725 23 144 4.3E-4 T 09-03-2017 IPR006635 NEAT domain LS838_RS00315 cd53d3268ae74538f72614427464d86b 262 Pfam PF05031 Iron Transport-associated domain 26 139 6.1E-16 T 09-03-2017 IPR006635 NEAT domain LS838_RS07320 1809a4be33225d240e2c0a459a155ef6 153 Gene3D G3DSA:3.40.1400.10 1 148 1.2E-53 T 09-03-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 LS838_RS07320 1809a4be33225d240e2c0a459a155ef6 153 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 146 2.6E-38 T 09-03-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 LS838_RS07320 1809a4be33225d240e2c0a459a155ef6 153 Pfam PF02502 Ribose/Galactose Isomerase 3 141 5.3E-45 T 09-03-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 LS838_RS07320 1809a4be33225d240e2c0a459a155ef6 153 PIRSF PIRSF005384 1 148 7.8E-47 T 09-03-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 LS838_RS07320 1809a4be33225d240e2c0a459a155ef6 153 SUPERFAMILY SSF89623 1 144 1.83E-44 T 09-03-2017 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 LS838_RS08320 6d65a44d83552db513066974c47387e2 267 Gene3D G3DSA:3.40.50.1820 8 257 4.9E-39 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS08320 6d65a44d83552db513066974c47387e2 267 Pfam PF07859 alpha/beta hydrolase fold 33 241 1.7E-23 T 09-03-2017 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 LS838_RS08320 6d65a44d83552db513066974c47387e2 267 SUPERFAMILY SSF53474 3 137 8.47E-35 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS08320 6d65a44d83552db513066974c47387e2 267 SUPERFAMILY SSF53474 167 242 8.47E-35 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS04080 34297a60b8b2e9ba8f577ca0af056b13 591 Pfam PF09972 Predicted membrane protein (DUF2207) 31 528 6.5E-88 T 09-03-2017 IPR018702 Protein of unknown function DUF2207, membrane LS838_RS09425 a29cc76badc4db496804bc23415b37af 291 SUPERFAMILY SSF53474 44 77 4.44E-12 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS09425 a29cc76badc4db496804bc23415b37af 291 SUPERFAMILY SSF53474 110 260 4.44E-12 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS09425 a29cc76badc4db496804bc23415b37af 291 Pfam PF06028 Alpha/beta hydrolase of unknown function (DUF915) 35 273 6.8E-61 T 09-03-2017 IPR010315 Protein of unknown function DUF915, hydrolase-like LS838_RS09425 a29cc76badc4db496804bc23415b37af 291 Gene3D G3DSA:3.40.50.1820 41 272 7.4E-73 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS08245 0059fa52f0abee98b36cd223a0dbe2f2 309 Pfam PF00696 Amino acid kinase family 3 282 1.2E-30 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase LS838_RS08245 0059fa52f0abee98b36cd223a0dbe2f2 309 Gene3D G3DSA:3.40.1160.10 2 308 7.5E-109 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase LS838_RS08245 0059fa52f0abee98b36cd223a0dbe2f2 309 TIGRFAM TIGR00746 arcC: carbamate kinase 3 308 5.6E-122 T 09-03-2017 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 LS838_RS08245 0059fa52f0abee98b36cd223a0dbe2f2 309 PIRSF PIRSF000723 1 309 2.5E-125 T 09-03-2017 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 LS838_RS08245 0059fa52f0abee98b36cd223a0dbe2f2 309 SUPERFAMILY SSF53633 1 307 1.05E-82 T 09-03-2017 IPR001048 Aspartate/glutamate/uridylate kinase LS838_RS08245 0059fa52f0abee98b36cd223a0dbe2f2 309 PRINTS PR01469 Bacterial carbamate kinase signature 263 278 1.0E-61 T 09-03-2017 LS838_RS08245 0059fa52f0abee98b36cd223a0dbe2f2 309 PRINTS PR01469 Bacterial carbamate kinase signature 178 196 1.0E-61 T 09-03-2017 LS838_RS08245 0059fa52f0abee98b36cd223a0dbe2f2 309 PRINTS PR01469 Bacterial carbamate kinase signature 155 174 1.0E-61 T 09-03-2017 LS838_RS08245 0059fa52f0abee98b36cd223a0dbe2f2 309 PRINTS PR01469 Bacterial carbamate kinase signature 208 223 1.0E-61 T 09-03-2017 LS838_RS08245 0059fa52f0abee98b36cd223a0dbe2f2 309 PRINTS PR01469 Bacterial carbamate kinase signature 71 89 1.0E-61 T 09-03-2017 LS838_RS08245 0059fa52f0abee98b36cd223a0dbe2f2 309 PRINTS PR01469 Bacterial carbamate kinase signature 38 57 1.0E-61 T 09-03-2017 LS838_RS08245 0059fa52f0abee98b36cd223a0dbe2f2 309 PRINTS PR01469 Bacterial carbamate kinase signature 106 125 1.0E-61 T 09-03-2017 LS838_RS05090 b527a1ae18ba6a4eb764e27f49a5244d 156 SUPERFAMILY SSF55729 1 154 8.14E-31 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS05090 b527a1ae18ba6a4eb764e27f49a5244d 156 Gene3D G3DSA:3.40.630.30 1 155 2.9E-35 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS05090 b527a1ae18ba6a4eb764e27f49a5244d 156 Pfam PF00583 Acetyltransferase (GNAT) family 61 144 2.3E-14 T 09-03-2017 IPR000182 GNAT domain GO:0008080 LS838_RS09265 d7bb652cb6735439124d7a6b11255526 843 Pfam PF11838 ERAP1-like C-terminal domain 507 813 1.1E-40 T 09-03-2017 IPR024571 ERAP1-like C-terminal domain LS838_RS09265 d7bb652cb6735439124d7a6b11255526 843 SUPERFAMILY SSF63737 5 187 3.92E-44 T 09-03-2017 LS838_RS09265 d7bb652cb6735439124d7a6b11255526 843 Pfam PF01433 Peptidase family M1 6 378 3.8E-134 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LS838_RS09265 d7bb652cb6735439124d7a6b11255526 843 Gene3D G3DSA:1.10.390.10 298 444 6.9E-48 T 09-03-2017 LS838_RS09265 d7bb652cb6735439124d7a6b11255526 843 SUPERFAMILY SSF55486 194 444 1.76E-78 T 09-03-2017 LS838_RS09265 d7bb652cb6735439124d7a6b11255526 843 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 304 316 6.5E-29 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LS838_RS09265 d7bb652cb6735439124d7a6b11255526 843 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 249 259 6.5E-29 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LS838_RS09265 d7bb652cb6735439124d7a6b11255526 843 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 285 300 6.5E-29 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LS838_RS09265 d7bb652cb6735439124d7a6b11255526 843 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 170 185 6.5E-29 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LS838_RS09265 d7bb652cb6735439124d7a6b11255526 843 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 6.5E-29 T 09-03-2017 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 LS838_RS01130 d40ee30073b9582ed46c9bda30b4b998 240 Pfam PF13353 4Fe-4S single cluster domain 80 219 1.2E-48 T 09-03-2017 LS838_RS01130 d40ee30073b9582ed46c9bda30b4b998 240 Gene3D G3DSA:3.80.30.10 133 227 9.6E-8 T 09-03-2017 LS838_RS01130 d40ee30073b9582ed46c9bda30b4b998 240 SUPERFAMILY SSF102114 92 161 4.9E-6 T 09-03-2017 LS838_RS01130 d40ee30073b9582ed46c9bda30b4b998 240 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 70 221 3.7E-53 T 09-03-2017 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 LS838_RS02835 0ceac038aa21580a443dd63f31a31538 267 PIRSF PIRSF015853 3 267 2.6E-62 T 09-03-2017 IPR007035 Peptidase M55, D-aminopeptidase LS838_RS02835 0ceac038aa21580a443dd63f31a31538 267 Gene3D G3DSA:3.40.50.10780 4 207 6.7E-57 T 09-03-2017 IPR027476 D-aminopeptidase, N-terminal LS838_RS02835 0ceac038aa21580a443dd63f31a31538 267 Pfam PF04951 D-aminopeptidase 4 260 5.9E-77 T 09-03-2017 IPR007035 Peptidase M55, D-aminopeptidase LS838_RS02835 0ceac038aa21580a443dd63f31a31538 267 Gene3D G3DSA:3.30.1360.130 217 267 8.0E-6 T 09-03-2017 LS838_RS02835 0ceac038aa21580a443dd63f31a31538 267 SUPERFAMILY SSF63992 4 266 8.76E-77 T 09-03-2017 IPR007035 Peptidase M55, D-aminopeptidase LS838_RS08865 4517774a996220f136582810e6ab60b7 315 Gene3D G3DSA:3.90.550.10 3 226 5.7E-40 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS08865 4517774a996220f136582810e6ab60b7 315 Pfam PF00535 Glycosyl transferase family 2 6 129 1.3E-24 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 LS838_RS08865 4517774a996220f136582810e6ab60b7 315 SUPERFAMILY SSF53448 3 215 4.42E-44 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS05185 c439e471bfb597a69c57b5d0d12fbbbc 259 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 123 1.6E-27 T 09-03-2017 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LS838_RS05185 c439e471bfb597a69c57b5d0d12fbbbc 259 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 127 258 1.7E-30 T 09-03-2017 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LS838_RS05185 c439e471bfb597a69c57b5d0d12fbbbc 259 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 259 26.657 T 09-03-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LS838_RS05185 c439e471bfb597a69c57b5d0d12fbbbc 259 Gene3D G3DSA:3.30.360.10 141 228 6.2E-34 T 09-03-2017 LS838_RS05185 c439e471bfb597a69c57b5d0d12fbbbc 259 PIRSF PIRSF000161 1 259 6.6E-64 T 09-03-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LS838_RS05185 c439e471bfb597a69c57b5d0d12fbbbc 259 Gene3D G3DSA:3.40.50.720 2 140 7.8E-40 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS05185 c439e471bfb597a69c57b5d0d12fbbbc 259 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 3 259 2.2E-66 T 09-03-2017 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LS838_RS05185 c439e471bfb597a69c57b5d0d12fbbbc 259 SUPERFAMILY SSF55347 125 231 3.49E-34 T 09-03-2017 LS838_RS05185 c439e471bfb597a69c57b5d0d12fbbbc 259 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 145 162 - T 09-03-2017 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LS838_RS05185 c439e471bfb597a69c57b5d0d12fbbbc 259 SUPERFAMILY SSF51735 2 149 4.64E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS02470 64c3b4f8aed391a61547f844368adce9 430 PIRSF PIRSF006060 2 430 2.7E-69 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LS838_RS02470 64c3b4f8aed391a61547f844368adce9 430 Pfam PF13520 Amino acid permease 5 409 2.0E-53 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LS838_RS01900 58aea3fd3af3bd4d320fb4f2cde8f061 61 Pfam PF00253 Ribosomal protein S14p/S29e 13 60 1.6E-21 T 09-03-2017 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01900 58aea3fd3af3bd4d320fb4f2cde8f061 61 Gene3D G3DSA:4.10.830.10 1 61 3.9E-26 T 09-03-2017 LS838_RS01900 58aea3fd3af3bd4d320fb4f2cde8f061 61 SUPERFAMILY SSF57716 3 61 7.13E-20 T 09-03-2017 LS838_RS01900 58aea3fd3af3bd4d320fb4f2cde8f061 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.148 T 09-03-2017 IPR023053 Ribosomal protein S14, type Z LS838_RS02250 0fa263edda36f5d16d572a82cee5db5d 223 Pfam PF08713 DNA alkylation repair enzyme 10 223 1.0E-66 T 09-03-2017 IPR014825 DNA alkylation repair enzyme LS838_RS02250 0fa263edda36f5d16d572a82cee5db5d 223 SUPERFAMILY SSF48371 17 223 2.39E-54 T 09-03-2017 IPR016024 Armadillo-type fold GO:0005488 LS838_RS02250 0fa263edda36f5d16d572a82cee5db5d 223 Gene3D G3DSA:1.25.10.10 68 145 4.1E-4 T 09-03-2017 IPR011989 Armadillo-like helical LS838_RS02250 0fa263edda36f5d16d572a82cee5db5d 223 Gene3D G3DSA:1.25.40.290 146 223 4.4E-38 T 09-03-2017 LS838_RS07675 d206428fdc76e227916fe7cb1610bd13 458 SUPERFAMILY SSF54211 256 270 1.56E-39 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LS838_RS07675 d206428fdc76e227916fe7cb1610bd13 458 SUPERFAMILY SSF54211 304 457 1.56E-39 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LS838_RS07675 d206428fdc76e227916fe7cb1610bd13 458 Gene3D G3DSA:2.20.28.10 6 34 6.2E-4 T 09-03-2017 IPR004039 Rubredoxin-type fold LS838_RS07675 d206428fdc76e227916fe7cb1610bd13 458 Gene3D G3DSA:3.40.50.300 62 277 1.2E-48 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07675 d206428fdc76e227916fe7cb1610bd13 458 Pfam PF13541 Subunit ChlI of Mg-chelatase 365 431 1.6E-9 T 09-03-2017 LS838_RS07675 d206428fdc76e227916fe7cb1610bd13 458 PRINTS PR01874 DNA repair protein radA signature 84 112 1.6E-83 T 09-03-2017 LS838_RS07675 d206428fdc76e227916fe7cb1610bd13 458 PRINTS PR01874 DNA repair protein radA signature 214 242 1.6E-83 T 09-03-2017 LS838_RS07675 d206428fdc76e227916fe7cb1610bd13 458 PRINTS PR01874 DNA repair protein radA signature 10 34 1.6E-83 T 09-03-2017 LS838_RS07675 d206428fdc76e227916fe7cb1610bd13 458 PRINTS PR01874 DNA repair protein radA signature 323 346 1.6E-83 T 09-03-2017 LS838_RS07675 d206428fdc76e227916fe7cb1610bd13 458 PRINTS PR01874 DNA repair protein radA signature 175 199 1.6E-83 T 09-03-2017 LS838_RS07675 d206428fdc76e227916fe7cb1610bd13 458 PRINTS PR01874 DNA repair protein radA signature 125 142 1.6E-83 T 09-03-2017 LS838_RS07675 d206428fdc76e227916fe7cb1610bd13 458 PRINTS PR01874 DNA repair protein radA signature 249 275 1.6E-83 T 09-03-2017 LS838_RS07675 d206428fdc76e227916fe7cb1610bd13 458 SUPERFAMILY SSF52540 73 292 3.63E-47 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07675 d206428fdc76e227916fe7cb1610bd13 458 SMART SM00382 92 245 2.1E-13 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS07675 d206428fdc76e227916fe7cb1610bd13 458 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 42.937 T 09-03-2017 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 LS838_RS07675 d206428fdc76e227916fe7cb1610bd13 458 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 1.2E-183 T 09-03-2017 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 LS838_RS07675 d206428fdc76e227916fe7cb1610bd13 458 Gene3D G3DSA:3.30.230.10 291 457 2.0E-33 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LS838_RS07675 d206428fdc76e227916fe7cb1610bd13 458 Pfam PF13481 AAA domain 71 223 5.5E-17 T 09-03-2017 LS838_RS08980 2c39ba2468aea2f00d3f84dd5939edb7 426 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 268 348 9.7E-15 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS08980 2c39ba2468aea2f00d3f84dd5939edb7 426 Pfam PF07282 Putative transposase DNA-binding domain 321 388 5.4E-19 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS08980 2c39ba2468aea2f00d3f84dd5939edb7 426 Pfam PF01385 Probable transposase 200 288 4.0E-12 T 09-03-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 LS838_RS01780 6fa656710bdf13f0f497f4659894f97e 153 Gene3D G3DSA:3.30.450.40 5 150 3.9E-45 T 09-03-2017 IPR029016 GAF domain-like LS838_RS01780 6fa656710bdf13f0f497f4659894f97e 153 Pfam PF13185 GAF domain 50 149 2.5E-9 T 09-03-2017 IPR003018 GAF domain GO:0005515 LS838_RS01780 6fa656710bdf13f0f497f4659894f97e 153 SUPERFAMILY SSF55781 8 150 5.23E-38 T 09-03-2017 IPR029016 GAF domain-like LS838_RS08945 4d85e8e864acffdef1dd6f47e9c83d0b 237 Pfam PF00877 NlpC/P60 family 129 223 8.0E-26 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain LS838_RS08945 4d85e8e864acffdef1dd6f47e9c83d0b 237 Gene3D G3DSA:3.90.1720.10 111 236 1.5E-39 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain LS838_RS08945 4d85e8e864acffdef1dd6f47e9c83d0b 237 SUPERFAMILY SSF54001 114 226 2.65E-36 T 09-03-2017 LS838_RS08460 71b078005636d9f94e47b13848d57d46 249 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 156 221 4.8E-7 T 09-03-2017 IPR024425 Cell wall-active antibiotics response 4TMS YvqF LS838_RS08415 e4f0c8b64dd59f5f079e617dfad0f826 247 Gene3D G3DSA:3.30.450.20 50 201 5.4E-31 T 09-03-2017 LS838_RS08415 e4f0c8b64dd59f5f079e617dfad0f826 247 Pfam PF13596 PAS domain 69 183 8.5E-29 T 09-03-2017 LS838_RS03085 df5bb8d99a0500ac577da54a64031e6d 107 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 10 33 1.4E-7 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site LS838_RS03085 df5bb8d99a0500ac577da54a64031e6d 107 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 34 1.1E-6 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site LS838_RS03085 df5bb8d99a0500ac577da54a64031e6d 107 PIRSF PIRSF029928 1 104 3.8E-32 T 09-03-2017 IPR016940 ComG operon protein C GO:0030420 LS838_RS03085 df5bb8d99a0500ac577da54a64031e6d 107 SUPERFAMILY SSF54523 15 80 6.98E-12 T 09-03-2017 LS838_RS03085 df5bb8d99a0500ac577da54a64031e6d 107 Gene3D G3DSA:3.30.700.10 15 83 5.5E-6 T 09-03-2017 LS838_RS07730 45f0a7dc5e863b1c4ff56d565105cae0 246 Pfam PF01925 Sulfite exporter TauE/SafE 6 240 9.1E-37 T 09-03-2017 IPR002781 Transmembrane protein TauE-like GO:0016021 LS838_RS01790 b90e9abc29a8613c4e18c88e5ae95298 114 Pfam PF08951 Enterocin A Immunity 27 83 1.3E-6 T 09-03-2017 IPR015046 Enterocin A Immunity LS838_RS02850 81df9b93280abef281c1335a78c0e1fa 339 SUPERFAMILY SSF142338 16 328 1.57E-97 T 09-03-2017 LS838_RS02850 81df9b93280abef281c1335a78c0e1fa 339 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 19 330 7.0E-111 T 09-03-2017 IPR010119 Gluconeogenesis factor LS838_RS02850 81df9b93280abef281c1335a78c0e1fa 339 Hamap MF_00973 Gluconeogenesis factor. 15 333 33.215 T 09-03-2017 IPR010119 Gluconeogenesis factor LS838_RS02850 81df9b93280abef281c1335a78c0e1fa 339 Pfam PF01933 Uncharacterised protein family UPF0052 19 308 6.1E-96 T 09-03-2017 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 LS838_RS02850 81df9b93280abef281c1335a78c0e1fa 339 Gene3D G3DSA:3.40.50.10680 89 332 3.1E-56 T 09-03-2017 LS838_RS02095 dfdfb68fea3d896ad40e53e0080dedf2 366 Gene3D G3DSA:3.40.50.2000 155 325 1.4E-26 T 09-03-2017 LS838_RS02095 dfdfb68fea3d896ad40e53e0080dedf2 366 Pfam PF13439 Glycosyltransferase Family 4 13 169 6.0E-22 T 09-03-2017 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 LS838_RS02095 dfdfb68fea3d896ad40e53e0080dedf2 366 SUPERFAMILY SSF53756 3 362 3.93E-74 T 09-03-2017 LS838_RS02095 dfdfb68fea3d896ad40e53e0080dedf2 366 Pfam PF00534 Glycosyl transferases group 1 188 331 4.2E-36 T 09-03-2017 IPR001296 Glycosyl transferase, family 1 LS838_RS02195 ce349086caf2f449c683f213d59023c5 285 Gene3D G3DSA:3.40.1350.10 142 264 1.3E-13 T 09-03-2017 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 LS838_RS02195 ce349086caf2f449c683f213d59023c5 285 Pfam PF14338 Mrr N-terminal domain 13 99 4.2E-15 T 09-03-2017 IPR025745 Restriction system protein Mrr-like N-terminal domain LS838_RS02195 ce349086caf2f449c683f213d59023c5 285 Pfam PF04471 Restriction endonuclease 144 261 2.1E-28 T 09-03-2017 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 LS838_RS02195 ce349086caf2f449c683f213d59023c5 285 SUPERFAMILY SSF52980 148 267 4.02E-12 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 LS838_RS01995 96e15cca7fe3a846911f80cabd217a3f 147 PIRSF PIRSF002181 1 146 9.8E-47 T 09-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LS838_RS01995 96e15cca7fe3a846911f80cabd217a3f 147 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 143 8.2E-59 T 09-03-2017 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01995 96e15cca7fe3a846911f80cabd217a3f 147 SUPERFAMILY SSF52161 7 144 1.31E-54 T 09-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LS838_RS01995 96e15cca7fe3a846911f80cabd217a3f 147 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 142 25.874 T 09-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LS838_RS01995 96e15cca7fe3a846911f80cabd217a3f 147 ProSitePatterns PS00783 Ribosomal protein L13 signature. 106 128 - T 09-03-2017 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 LS838_RS01995 96e15cca7fe3a846911f80cabd217a3f 147 Pfam PF00572 Ribosomal protein L13 15 139 7.0E-53 T 09-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LS838_RS01995 96e15cca7fe3a846911f80cabd217a3f 147 Gene3D G3DSA:3.90.1180.10 6 142 2.6E-59 T 09-03-2017 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 LS838_RS06840 336cbe8579e2dbdb9dad3882f996956a 401 PIRSF PIRSF033091 1 397 1.6E-93 T 09-03-2017 IPR014576 Predicted phosphoesterase, YhaO type LS838_RS06840 336cbe8579e2dbdb9dad3882f996956a 401 SUPERFAMILY SSF56300 1 299 2.81E-53 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like LS838_RS06840 336cbe8579e2dbdb9dad3882f996956a 401 Gene3D G3DSA:3.60.21.10 1 235 1.9E-45 T 09-03-2017 IPR029052 Metallo-dependent phosphatase-like LS838_RS06840 336cbe8579e2dbdb9dad3882f996956a 401 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 219 9.0E-13 T 09-03-2017 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 LS838_RS05845 2cd49d1e84b894f5f9f62edf03816a53 175 SUPERFAMILY SSF53271 2 166 4.97E-48 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS05845 2cd49d1e84b894f5f9f62edf03816a53 175 Gene3D G3DSA:3.40.50.2020 5 173 2.1E-63 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS05845 2cd49d1e84b894f5f9f62edf03816a53 175 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 5 172 37.1 T 09-03-2017 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 LS838_RS05845 2cd49d1e84b894f5f9f62edf03816a53 175 Pfam PF00156 Phosphoribosyl transferase domain 31 170 3.3E-17 T 09-03-2017 IPR000836 Phosphoribosyltransferase domain GO:0009116 LS838_RS05845 2cd49d1e84b894f5f9f62edf03816a53 175 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 6 172 1.5E-66 T 09-03-2017 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 LS838_RS03630 4bb11476585efe5880e7df10be9f9396 237 Gene3D G3DSA:1.10.3720.10 24 233 1.1E-31 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS03630 4bb11476585efe5880e7df10be9f9396 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 51 232 2.5E-17 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS03630 4bb11476585efe5880e7df10be9f9396 237 SUPERFAMILY SSF161098 29 219 1.83E-36 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS02030 bb83fb6a14f242795ee5a646a7360838 163 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 22 157 3.3E-31 T 09-03-2017 IPR005247 YbhB/YbcL LS838_RS02030 bb83fb6a14f242795ee5a646a7360838 163 SUPERFAMILY SSF49777 7 156 1.96E-30 T 09-03-2017 IPR008914 Phosphatidylethanolamine-binding protein LS838_RS02030 bb83fb6a14f242795ee5a646a7360838 163 Pfam PF01161 Phosphatidylethanolamine-binding protein 12 157 4.5E-25 T 09-03-2017 IPR008914 Phosphatidylethanolamine-binding protein LS838_RS02030 bb83fb6a14f242795ee5a646a7360838 163 Gene3D G3DSA:3.90.280.10 8 157 8.0E-44 T 09-03-2017 IPR008914 Phosphatidylethanolamine-binding protein LS838_RS03550 cd3cf6cf9561f7fc8efa04cc9ed5c02c 618 Hamap MF_01491 Ribonuclease J [rnj]. 1 554 37.762 T 09-03-2017 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 LS838_RS03550 cd3cf6cf9561f7fc8efa04cc9ed5c02c 618 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 5 552 1.2E-155 T 09-03-2017 IPR004613 Ribonuclease J GO:0003723|GO:0046872 LS838_RS03550 cd3cf6cf9561f7fc8efa04cc9ed5c02c 618 SUPERFAMILY SSF56281 5 420 3.94E-74 T 09-03-2017 IPR001279 Metallo-beta-lactamase LS838_RS03550 cd3cf6cf9561f7fc8efa04cc9ed5c02c 618 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 359 405 1.0E-7 T 09-03-2017 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain LS838_RS03550 cd3cf6cf9561f7fc8efa04cc9ed5c02c 618 Gene3D G3DSA:3.60.15.10 2 254 2.3E-64 T 09-03-2017 IPR001279 Metallo-beta-lactamase LS838_RS03550 cd3cf6cf9561f7fc8efa04cc9ed5c02c 618 SMART SM00849 17 213 1.3E-21 T 09-03-2017 IPR001279 Metallo-beta-lactamase LS838_RS03550 cd3cf6cf9561f7fc8efa04cc9ed5c02c 618 Pfam PF00753 Metallo-beta-lactamase superfamily 17 166 2.7E-13 T 09-03-2017 IPR001279 Metallo-beta-lactamase LS838_RS07920 87c0b367eb427fd7aaf0c6dc00b24463 382 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 359 1.1E-137 T 09-03-2017 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 LS838_RS07920 87c0b367eb427fd7aaf0c6dc00b24463 382 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 189 199 - T 09-03-2017 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 LS838_RS07920 87c0b367eb427fd7aaf0c6dc00b24463 382 Gene3D G3DSA:3.90.550.10 4 269 1.4E-86 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS07920 87c0b367eb427fd7aaf0c6dc00b24463 382 Gene3D G3DSA:3.90.550.10 306 338 1.4E-86 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS07920 87c0b367eb427fd7aaf0c6dc00b24463 382 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 11 30 - T 09-03-2017 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 LS838_RS07920 87c0b367eb427fd7aaf0c6dc00b24463 382 SUPERFAMILY SSF51161 266 360 2.5E-14 T 09-03-2017 IPR011004 Trimeric LpxA-like LS838_RS07920 87c0b367eb427fd7aaf0c6dc00b24463 382 Pfam PF00483 Nucleotidyl transferase 7 258 8.8E-69 T 09-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 LS838_RS07920 87c0b367eb427fd7aaf0c6dc00b24463 382 Gene3D G3DSA:2.160.10.10 339 374 2.8E-4 T 09-03-2017 LS838_RS07920 87c0b367eb427fd7aaf0c6dc00b24463 382 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 2 374 45.959 T 09-03-2017 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 LS838_RS07920 87c0b367eb427fd7aaf0c6dc00b24463 382 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 98 106 - T 09-03-2017 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 LS838_RS07920 87c0b367eb427fd7aaf0c6dc00b24463 382 SUPERFAMILY SSF53448 2 262 2.82E-85 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS07920 87c0b367eb427fd7aaf0c6dc00b24463 382 SUPERFAMILY SSF53448 323 339 2.82E-85 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS06805 4e1a39d084e150f7bf85ae058b310b3b 240 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 5 230 2.4E-54 T 09-03-2017 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LS838_RS06805 4e1a39d084e150f7bf85ae058b310b3b 240 Gene3D G3DSA:3.20.20.70 3 234 9.0E-78 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LS838_RS06805 4e1a39d084e150f7bf85ae058b310b3b 240 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 2 235 36.37 T 09-03-2017 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LS838_RS06805 4e1a39d084e150f7bf85ae058b310b3b 240 SMART SM00934 4 230 2.0E-83 T 09-03-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LS838_RS06805 4e1a39d084e150f7bf85ae058b310b3b 240 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 4 230 1.3E-43 T 09-03-2017 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LS838_RS06805 4e1a39d084e150f7bf85ae058b310b3b 240 SUPERFAMILY SSF51366 2 233 3.24E-63 T 09-03-2017 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 LS838_RS06805 4e1a39d084e150f7bf85ae058b310b3b 240 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 09-03-2017 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 LS838_RS09400 57beadf7853e035307d5c95f0f966d70 303 Pfam PF00892 EamA-like transporter family 6 146 6.8E-18 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LS838_RS09400 57beadf7853e035307d5c95f0f966d70 303 Pfam PF00892 EamA-like transporter family 160 288 1.7E-18 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LS838_RS09400 57beadf7853e035307d5c95f0f966d70 303 SUPERFAMILY SSF103481 46 148 1.44E-7 T 09-03-2017 LS838_RS09400 57beadf7853e035307d5c95f0f966d70 303 SUPERFAMILY SSF103481 192 295 5.75E-12 T 09-03-2017 LS838_RS08830 08c7e3b71bfea6676322698672fc1ea6 614 SUPERFAMILY SSF52540 400 592 6.92E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08830 08c7e3b71bfea6676322698672fc1ea6 614 SUPERFAMILY SSF52540 136 300 6.92E-33 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08830 08c7e3b71bfea6676322698672fc1ea6 614 Gene3D G3DSA:3.40.50.300 133 239 6.0E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08830 08c7e3b71bfea6676322698672fc1ea6 614 Gene3D G3DSA:3.40.50.300 414 592 6.0E-30 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08830 08c7e3b71bfea6676322698672fc1ea6 614 Pfam PF01935 Domain of unknown function DUF87 142 228 6.4E-13 T 09-03-2017 IPR002789 Helicase HerA, central domain LS838_RS00045 bc9bd293c33e5038548d9c680b185f2b 78 ProSitePatterns PS00057 Ribosomal protein S18 signature. 25 48 - T 09-03-2017 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS00045 bc9bd293c33e5038548d9c680b185f2b 78 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 24 77 1.0E-24 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS00045 bc9bd293c33e5038548d9c680b185f2b 78 Pfam PF01084 Ribosomal protein S18 22 72 3.5E-29 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS00045 bc9bd293c33e5038548d9c680b185f2b 78 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 5 77 22.986 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS00045 bc9bd293c33e5038548d9c680b185f2b 78 Gene3D G3DSA:4.10.640.10 12 77 2.1E-34 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS00045 bc9bd293c33e5038548d9c680b185f2b 78 TIGRFAM TIGR00165 S18: ribosomal protein bS18 10 76 1.9E-31 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS00045 bc9bd293c33e5038548d9c680b185f2b 78 SUPERFAMILY SSF46911 4 77 2.49E-30 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS00045 bc9bd293c33e5038548d9c680b185f2b 78 PRINTS PR00974 Ribosomal protein S18 family signature 32 42 1.7E-21 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS00045 bc9bd293c33e5038548d9c680b185f2b 78 PRINTS PR00974 Ribosomal protein S18 family signature 64 74 1.7E-21 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS00045 bc9bd293c33e5038548d9c680b185f2b 78 PRINTS PR00974 Ribosomal protein S18 family signature 50 64 1.7E-21 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS00045 bc9bd293c33e5038548d9c680b185f2b 78 PRINTS PR00974 Ribosomal protein S18 family signature 42 49 1.7E-21 T 09-03-2017 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS03820 841a52f217ff141b9dccb3b948e2709f 117 Gene3D G3DSA:3.40.630.30 6 101 2.3E-5 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS03820 841a52f217ff141b9dccb3b948e2709f 117 SUPERFAMILY SSF55729 26 99 1.43E-5 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS08955 b44bf975a6e3e528efc9052bf15466d8 157 Gene3D G3DSA:3.90.1720.10 32 151 2.0E-39 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain LS838_RS08955 b44bf975a6e3e528efc9052bf15466d8 157 SUPERFAMILY SSF54001 32 150 1.5E-36 T 09-03-2017 LS838_RS08955 b44bf975a6e3e528efc9052bf15466d8 157 Pfam PF00877 NlpC/P60 family 51 152 4.1E-25 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain LS838_RS07115 2e73f44c4606f68c7767edca4b5a5574 319 Gene3D G3DSA:3.90.1640.10 16 189 1.2E-32 T 09-03-2017 LS838_RS07115 2e73f44c4606f68c7767edca4b5a5574 319 SUPERFAMILY SSF64182 14 307 3.14E-71 T 09-03-2017 LS838_RS07115 2e73f44c4606f68c7767edca4b5a5574 319 Pfam PF01368 DHH family 17 153 5.0E-15 T 09-03-2017 IPR001667 DDH domain LS838_RS07115 2e73f44c4606f68c7767edca4b5a5574 319 Pfam PF02272 DHHA1 domain 253 307 1.2E-4 T 09-03-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 LS838_RS01510 5c5e98f8d44ae26ff6b2a0dbb266e167 105 Gene3D G3DSA:3.40.30.10 2 102 1.5E-21 T 09-03-2017 IPR012336 Thioredoxin-like fold LS838_RS01510 5c5e98f8d44ae26ff6b2a0dbb266e167 105 Pfam PF00085 Thioredoxin 25 103 4.4E-6 T 09-03-2017 IPR013766 Thioredoxin domain GO:0045454 LS838_RS01510 5c5e98f8d44ae26ff6b2a0dbb266e167 105 SUPERFAMILY SSF52833 12 102 1.66E-16 T 09-03-2017 IPR012336 Thioredoxin-like fold LS838_RS00325 6cbe891a6c26310282fd1864af7a7ec9 292 SUPERFAMILY SSF53807 35 290 1.26E-45 T 09-03-2017 LS838_RS00325 6cbe891a6c26310282fd1864af7a7ec9 292 Pfam PF01497 Periplasmic binding protein 39 265 4.1E-35 T 09-03-2017 IPR002491 ABC transporter periplasmic binding domain GO:0005488 LS838_RS00325 6cbe891a6c26310282fd1864af7a7ec9 292 Gene3D G3DSA:3.40.50.1980 37 147 1.4E-19 T 09-03-2017 LS838_RS00325 6cbe891a6c26310282fd1864af7a7ec9 292 Gene3D G3DSA:3.40.50.1980 148 290 7.9E-27 T 09-03-2017 LS838_RS00325 6cbe891a6c26310282fd1864af7a7ec9 292 TIGRFAM TIGR03659 IsdE: heme ABC transporter, heme-binding protein isdE 6 289 1.4E-101 T 09-03-2017 IPR019957 ABC transporter, high-affinity heme uptake system protein IsdE GO:0015886|GO:0016020|GO:0020037 LS838_RS09750 7c7ca867b70089a54d3ee5338358450d 234 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 11 220 2.4E-17 T 09-03-2017 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 LS838_RS09750 7c7ca867b70089a54d3ee5338358450d 234 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 234 1.6E-77 T 09-03-2017 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 LS838_RS09750 7c7ca867b70089a54d3ee5338358450d 234 SUPERFAMILY SSF100950 1 233 6.7E-85 T 09-03-2017 LS838_RS09750 7c7ca867b70089a54d3ee5338358450d 234 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 112 130 - T 09-03-2017 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 LS838_RS09750 7c7ca867b70089a54d3ee5338358450d 234 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 233 41.629 T 09-03-2017 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 LS838_RS09750 7c7ca867b70089a54d3ee5338358450d 234 Gene3D G3DSA:3.40.50.1360 1 234 8.4E-89 T 09-03-2017 LS838_RS03200 e539cb929076128cf0a04cb81545b07e 239 SUPERFAMILY SSF81336 75 233 1.12E-37 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 LS838_RS03200 e539cb929076128cf0a04cb81545b07e 239 Gene3D G3DSA:1.20.120.220 75 238 7.5E-40 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 LS838_RS03200 e539cb929076128cf0a04cb81545b07e 239 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 25 235 1.4E-43 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 LS838_RS03200 e539cb929076128cf0a04cb81545b07e 239 ProSitePatterns PS00449 ATP synthase a subunit signature. 167 176 - T 09-03-2017 IPR023011 ATPase, F0 complex, subunit A, active site Reactome: R-HSA-163210 LS838_RS03200 e539cb929076128cf0a04cb81545b07e 239 PRINTS PR00123 ATP synthase A subunit signature 80 96 1.8E-17 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 LS838_RS03200 e539cb929076128cf0a04cb81545b07e 239 PRINTS PR00123 ATP synthase A subunit signature 148 163 1.8E-17 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 LS838_RS03200 e539cb929076128cf0a04cb81545b07e 239 PRINTS PR00123 ATP synthase A subunit signature 219 234 1.8E-17 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 LS838_RS03200 e539cb929076128cf0a04cb81545b07e 239 PRINTS PR00123 ATP synthase A subunit signature 164 186 1.8E-17 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 LS838_RS03200 e539cb929076128cf0a04cb81545b07e 239 Pfam PF00119 ATP synthase A chain 24 232 8.2E-52 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 LS838_RS03200 e539cb929076128cf0a04cb81545b07e 239 Hamap MF_01393 ATP synthase subunit a [atpB]. 1 239 12.584 T 09-03-2017 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 LS838_RS09110 527b6d89a5244a6f04c703495b942039 575 SUPERFAMILY SSF52540 325 570 8.67E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09110 527b6d89a5244a6f04c703495b942039 575 Pfam PF00005 ABC transporter 351 500 6.3E-30 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS09110 527b6d89a5244a6f04c703495b942039 575 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS09110 527b6d89a5244a6f04c703495b942039 575 Gene3D G3DSA:1.20.1560.10 3 315 4.2E-66 T 09-03-2017 LS838_RS09110 527b6d89a5244a6f04c703495b942039 575 SMART SM00382 360 548 1.5E-10 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS09110 527b6d89a5244a6f04c703495b942039 575 Gene3D G3DSA:3.40.50.300 333 563 2.9E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09110 527b6d89a5244a6f04c703495b942039 575 Pfam PF00664 ABC transporter transmembrane region 17 286 2.7E-47 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS09110 527b6d89a5244a6f04c703495b942039 575 SUPERFAMILY SSF90123 3 315 5.89E-73 T 09-03-2017 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 LS838_RS04800 4903a0577a995f668168fcbed77f657c 239 Gene3D G3DSA:3.40.50.1000 100 237 1.7E-38 T 09-03-2017 IPR023214 HAD-like domain LS838_RS04800 4903a0577a995f668168fcbed77f657c 239 SUPERFAMILY SSF56784 3 235 3.41E-48 T 09-03-2017 IPR023214 HAD-like domain LS838_RS04800 4903a0577a995f668168fcbed77f657c 239 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 207 6.3E-31 T 09-03-2017 IPR023214 HAD-like domain LS838_RS04800 4903a0577a995f668168fcbed77f657c 239 Gene3D G3DSA:1.10.150.240 19 99 3.8E-31 T 09-03-2017 IPR023198 Phosphoglycolate phosphatase, domain 2 LS838_RS04800 4903a0577a995f668168fcbed77f657c 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 2.1E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LS838_RS04800 4903a0577a995f668168fcbed77f657c 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 169 189 2.1E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LS838_RS04800 4903a0577a995f668168fcbed77f657c 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 121 134 2.1E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LS838_RS04800 4903a0577a995f668168fcbed77f657c 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 151 167 2.1E-7 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LS838_RS04800 4903a0577a995f668168fcbed77f657c 239 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 103 199 7.7E-11 T 09-03-2017 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 LS838_RS07420 86592938ae9d119974bb52a28e901f96 56 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 2 54 8.0E-15 T 09-03-2017 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 LS838_RS07420 86592938ae9d119974bb52a28e901f96 56 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 1 56 1.7E-14 T 09-03-2017 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 LS838_RS07420 86592938ae9d119974bb52a28e901f96 56 Gene3D G3DSA:1.20.5.1030 1 56 3.1E-16 T 09-03-2017 LS838_RS07060 380d3c41b5ca9ee842df20d013cf7bed 139 Gene3D G3DSA:1.10.287.950 30 107 5.2E-4 T 09-03-2017 LS838_RS07060 380d3c41b5ca9ee842df20d013cf7bed 139 Pfam PF06103 Bacterial protein of unknown function (DUF948) 8 102 3.8E-27 T 09-03-2017 IPR009293 Uncharacterised protein family UPF0478 LS838_RS08985 5e1bcff2804243d987b329e3974e9203 512 Pfam PF13425 O-antigen ligase like membrane protein 2 497 1.4E-131 T 09-03-2017 LS838_RS04510 decc04c7766ecd15687dcf9f73b2c85b 209 Gene3D G3DSA:1.10.1670.10 130 198 6.4E-24 T 09-03-2017 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 LS838_RS04510 decc04c7766ecd15687dcf9f73b2c85b 209 ProSitePatterns PS01155 Endonuclease III family signature. 109 138 - T 09-03-2017 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 LS838_RS04510 decc04c7766ecd15687dcf9f73b2c85b 209 Gene3D G3DSA:1.10.340.30 31 129 9.8E-36 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 LS838_RS04510 decc04c7766ecd15687dcf9f73b2c85b 209 TIGRFAM TIGR01083 nth: endonuclease III 12 198 3.7E-69 T 09-03-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 LS838_RS04510 decc04c7766ecd15687dcf9f73b2c85b 209 PIRSF PIRSF001435 8 204 3.5E-40 T 09-03-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 LS838_RS04510 decc04c7766ecd15687dcf9f73b2c85b 209 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 42 176 1.3E-25 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 LS838_RS04510 decc04c7766ecd15687dcf9f73b2c85b 209 Hamap MF_00942 Endonuclease III [nth]. 1 208 33.318 T 09-03-2017 IPR005759 Endonuclease III GO:0003906|GO:0006284 LS838_RS04510 decc04c7766ecd15687dcf9f73b2c85b 209 SUPERFAMILY SSF48150 9 199 3.77E-61 T 09-03-2017 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 LS838_RS04510 decc04c7766ecd15687dcf9f73b2c85b 209 SMART SM00478 45 193 1.5E-59 T 09-03-2017 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 LS838_RS05190 560ca26b634ee35fde84afc06ff26e44 309 SUPERFAMILY SSF51569 11 291 2.41E-89 T 09-03-2017 LS838_RS05190 560ca26b634ee35fde84afc06ff26e44 309 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 139 169 - T 09-03-2017 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LS838_RS05190 560ca26b634ee35fde84afc06ff26e44 309 Pfam PF00701 Dihydrodipicolinate synthetase family 9 291 8.9E-82 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LS838_RS05190 560ca26b634ee35fde84afc06ff26e44 309 PIRSF PIRSF001365 5 300 2.2E-87 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LS838_RS05190 560ca26b634ee35fde84afc06ff26e44 309 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 10 291 2.5E-89 T 09-03-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LS838_RS05190 560ca26b634ee35fde84afc06ff26e44 309 Gene3D G3DSA:3.20.20.70 10 291 1.7E-103 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LS838_RS05190 560ca26b634ee35fde84afc06ff26e44 309 SMART SM01130 6 293 2.1E-110 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LS838_RS05190 560ca26b634ee35fde84afc06ff26e44 309 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 6 292 57.999 T 09-03-2017 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 LS838_RS05190 560ca26b634ee35fde84afc06ff26e44 309 PRINTS PR00146 Dihydrodipicolinate synthase signature 109 125 9.6E-31 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LS838_RS05190 560ca26b634ee35fde84afc06ff26e44 309 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 9.6E-31 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LS838_RS05190 560ca26b634ee35fde84afc06ff26e44 309 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 9.6E-31 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LS838_RS05190 560ca26b634ee35fde84afc06ff26e44 309 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 9.6E-31 T 09-03-2017 IPR002220 DapA-like GO:0008152|GO:0016829 LS838_RS00035 1ef56d5ee5334afd700159ec892dc726 97 Gene3D G3DSA:3.30.70.60 3 97 2.3E-35 T 09-03-2017 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 LS838_RS00035 1ef56d5ee5334afd700159ec892dc726 97 TIGRFAM TIGR00166 S6: ribosomal protein bS6 4 96 3.6E-27 T 09-03-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS00035 1ef56d5ee5334afd700159ec892dc726 97 SUPERFAMILY SSF54995 3 97 1.27E-33 T 09-03-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS00035 1ef56d5ee5334afd700159ec892dc726 97 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 2 97 21.519 T 09-03-2017 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 LS838_RS00035 1ef56d5ee5334afd700159ec892dc726 97 Pfam PF01250 Ribosomal protein S6 4 94 4.1E-30 T 09-03-2017 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS02970 244ebdcf7561ae41aebab4245fafd2b4 279 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 120 237 2.5E-43 T 09-03-2017 IPR003390 DNA integrity scanning protein, DisA, N-terminal LS838_RS02970 244ebdcf7561ae41aebab4245fafd2b4 279 PIRSF PIRSF004793 6 271 2.2E-87 T 09-03-2017 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 LS838_RS02970 244ebdcf7561ae41aebab4245fafd2b4 279 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 12 257 1.2E-84 T 09-03-2017 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 LS838_RS02970 244ebdcf7561ae41aebab4245fafd2b4 279 Gene3D G3DSA:3.40.1700.10 113 242 1.9E-54 T 09-03-2017 LS838_RS02970 244ebdcf7561ae41aebab4245fafd2b4 279 SUPERFAMILY SSF143597 43 241 1.15E-67 T 09-03-2017 LS838_RS09325 d877894c3a193738599b6d6dee0f322d 260 Pfam PF13350 Tyrosine phosphatase family 8 255 8.4E-57 T 09-03-2017 IPR026893 Tyrosine/serine-protein phosphatase IphP-type LS838_RS09325 d877894c3a193738599b6d6dee0f322d 260 Gene3D G3DSA:3.90.190.10 11 182 3.9E-19 T 09-03-2017 IPR029021 Protein-tyrosine phosphatase-like LS838_RS09325 d877894c3a193738599b6d6dee0f322d 260 SUPERFAMILY SSF52799 8 254 1.84E-46 T 09-03-2017 IPR029021 Protein-tyrosine phosphatase-like LS838_RS08805 2effce3ea2f9db9202f0d462efc76956 275 Gene3D G3DSA:3.40.10.10 226 275 6.0E-8 T 09-03-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 LS838_RS08805 2effce3ea2f9db9202f0d462efc76956 275 Pfam PF02805 Metal binding domain of Ada 225 275 2.2E-4 T 09-03-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 LS838_RS08805 2effce3ea2f9db9202f0d462efc76956 275 SUPERFAMILY SSF57884 226 275 1.07E-9 T 09-03-2017 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 LS838_RS01620 761224ea7d087c56b12ff45fe1d5f79b 132 Gene3D G3DSA:2.40.128.20 2 131 6.0E-21 T 09-03-2017 IPR012674 Calycin LS838_RS01620 761224ea7d087c56b12ff45fe1d5f79b 132 Pfam PF09148 Domain of unknown function (DUF1934) 6 128 2.3E-20 T 09-03-2017 IPR015231 Protein of unknown function DUF1934 LS838_RS01620 761224ea7d087c56b12ff45fe1d5f79b 132 SUPERFAMILY SSF50814 3 131 6.32E-29 T 09-03-2017 IPR011038 Calycin-like LS838_RS00855 9e6b4f01c028acb161bfde57afed2db1 208 SUPERFAMILY SSF50486 4 200 2.12E-54 T 09-03-2017 IPR011034 Formyl transferase, C-terminal-like GO:0003824 LS838_RS00855 9e6b4f01c028acb161bfde57afed2db1 208 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 4 194 27.318 T 09-03-2017 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 LS838_RS00855 9e6b4f01c028acb161bfde57afed2db1 208 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 7 191 1.9E-46 T 09-03-2017 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 LS838_RS00855 9e6b4f01c028acb161bfde57afed2db1 208 Gene3D G3DSA:3.10.300.10 3 200 1.7E-57 T 09-03-2017 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 LS838_RS00855 9e6b4f01c028acb161bfde57afed2db1 208 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 10 194 2.8E-43 T 09-03-2017 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 LS838_RS00605 9f66277e8a6e877578e64700d043f553 311 Gene3D G3DSA:3.40.192.10 26 133 5.7E-37 T 09-03-2017 LS838_RS00605 9f66277e8a6e877578e64700d043f553 311 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 29 309 30.265 T 09-03-2017 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 LS838_RS00605 9f66277e8a6e877578e64700d043f553 311 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 34 116 3.0E-27 T 09-03-2017 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 LS838_RS00605 9f66277e8a6e877578e64700d043f553 311 SUPERFAMILY SSF53223 24 128 2.76E-30 T 09-03-2017 LS838_RS00605 9f66277e8a6e877578e64700d043f553 311 SUPERFAMILY SSF51735 129 307 1.62E-32 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS00605 9f66277e8a6e877578e64700d043f553 311 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 32 307 2.9E-60 T 09-03-2017 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 LS838_RS00605 9f66277e8a6e877578e64700d043f553 311 Gene3D G3DSA:3.40.50.720 134 308 6.8E-40 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS09905 4f972786124d30119d791731b298ea70 209 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS09905 4f972786124d30119d791731b298ea70 209 Pfam PF00005 ABC transporter 18 157 7.1E-23 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS09905 4f972786124d30119d791731b298ea70 209 SUPERFAMILY SSF52540 2 207 3.42E-42 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09905 4f972786124d30119d791731b298ea70 209 SMART SM00382 27 207 9.6E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS09905 4f972786124d30119d791731b298ea70 209 Gene3D G3DSA:3.40.50.300 3 208 2.7E-44 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06280 8b4e14e6bcf1a97b026afff03f9c4e60 132 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 3 131 1.5E-32 T 09-03-2017 IPR011605 NusB antitermination factor GO:0006353 LS838_RS06280 8b4e14e6bcf1a97b026afff03f9c4e60 132 Pfam PF01029 NusB family 5 130 8.6E-29 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LS838_RS06280 8b4e14e6bcf1a97b026afff03f9c4e60 132 Gene3D G3DSA:1.10.940.10 1 132 1.3E-33 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LS838_RS06280 8b4e14e6bcf1a97b026afff03f9c4e60 132 SUPERFAMILY SSF48013 3 131 2.09E-26 T 09-03-2017 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 LS838_RS08940 b037a949ce0c1c5c2311ccf0e02009bc 252 Pfam PF00877 NlpC/P60 family 146 246 3.0E-22 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain LS838_RS08940 b037a949ce0c1c5c2311ccf0e02009bc 252 Gene3D G3DSA:3.90.1720.10 129 246 1.4E-37 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain LS838_RS08940 b037a949ce0c1c5c2311ccf0e02009bc 252 SUPERFAMILY SSF54001 127 246 1.14E-34 T 09-03-2017 LS838_RS06405 c3b8636f06e8548b45f96c27d5cf0865 155 SUPERFAMILY SSF52255 1 152 1.1E-63 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 LS838_RS06405 c3b8636f06e8548b45f96c27d5cf0865 155 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 1 151 5.7E-63 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 LS838_RS06405 c3b8636f06e8548b45f96c27d5cf0865 155 Gene3D G3DSA:3.40.50.7700 1 153 6.9E-72 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 LS838_RS06405 c3b8636f06e8548b45f96c27d5cf0865 155 PIRSF PIRSF001338 1 155 3.1E-68 T 09-03-2017 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 LS838_RS06405 c3b8636f06e8548b45f96c27d5cf0865 155 Pfam PF00731 AIR carboxylase 1 144 3.6E-64 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 LS838_RS06405 c3b8636f06e8548b45f96c27d5cf0865 155 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 1 150 29.64 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 LS838_RS06405 c3b8636f06e8548b45f96c27d5cf0865 155 SMART SM01001 1 146 3.7E-93 T 09-03-2017 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 LS838_RS07475 f4d5df8050c99da185db7b0ba6f1d347 472 Gene3D G3DSA:3.30.70.360 204 285 1.4E-25 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain LS838_RS07475 f4d5df8050c99da185db7b0ba6f1d347 472 SUPERFAMILY SSF55031 201 373 2.77E-38 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain LS838_RS07475 f4d5df8050c99da185db7b0ba6f1d347 472 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 16 467 1.1E-140 T 09-03-2017 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 LS838_RS07475 f4d5df8050c99da185db7b0ba6f1d347 472 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 116 154 - T 09-03-2017 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 LS838_RS07475 f4d5df8050c99da185db7b0ba6f1d347 472 SUPERFAMILY SSF53187 5 186 4.29E-64 T 09-03-2017 LS838_RS07475 f4d5df8050c99da185db7b0ba6f1d347 472 SUPERFAMILY SSF53187 389 471 4.29E-64 T 09-03-2017 LS838_RS07475 f4d5df8050c99da185db7b0ba6f1d347 472 Gene3D G3DSA:3.40.630.10 6 186 3.5E-66 T 09-03-2017 LS838_RS07475 f4d5df8050c99da185db7b0ba6f1d347 472 Gene3D G3DSA:3.40.630.10 388 471 3.5E-66 T 09-03-2017 LS838_RS07475 f4d5df8050c99da185db7b0ba6f1d347 472 Gene3D G3DSA:3.30.70.360 286 374 1.0E-25 T 09-03-2017 IPR011650 Peptidase M20, dimerisation domain LS838_RS07475 f4d5df8050c99da185db7b0ba6f1d347 472 Pfam PF01546 Peptidase family M20/M25/M40 85 468 2.4E-31 T 09-03-2017 IPR002933 Peptidase M20 GO:0008152|GO:0016787 LS838_RS04000 0e765a31d5acaf9fc29bbf0337262568 419 Gene3D G3DSA:1.10.287.130 191 245 2.9E-11 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS04000 0e765a31d5acaf9fc29bbf0337262568 419 SMART SM00387 303 419 1.9E-12 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS04000 0e765a31d5acaf9fc29bbf0337262568 419 SMART SM00388 197 259 3.7E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS04000 0e765a31d5acaf9fc29bbf0337262568 419 SUPERFAMILY SSF55874 249 415 1.18E-18 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS04000 0e765a31d5acaf9fc29bbf0337262568 419 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 305 415 1.7E-9 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS04000 0e765a31d5acaf9fc29bbf0337262568 419 Gene3D G3DSA:3.30.565.10 246 417 7.2E-21 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS04000 0e765a31d5acaf9fc29bbf0337262568 419 SUPERFAMILY SSF47384 184 258 6.47E-12 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS04000 0e765a31d5acaf9fc29bbf0337262568 419 Pfam PF00512 His Kinase A (phospho-acceptor) domain 198 257 4.1E-9 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS00805 a5919afa30ef7d9139ea0c6c52a57d7a 299 Hamap MF_00188 Protease HtpX [htpX]. 10 299 25.002 T 09-03-2017 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 LS838_RS00805 a5919afa30ef7d9139ea0c6c52a57d7a 299 Gene3D G3DSA:3.30.2010.10 70 159 4.6E-33 T 09-03-2017 LS838_RS00805 a5919afa30ef7d9139ea0c6c52a57d7a 299 Pfam PF01435 Peptidase family M48 78 299 2.7E-35 T 09-03-2017 IPR001915 Peptidase M48 GO:0004222|GO:0006508 LS838_RS05325 3845155d1db161bc843f88a6e046b65d 307 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS05325 3845155d1db161bc843f88a6e046b65d 307 Gene3D G3DSA:3.40.50.300 1 237 7.1E-81 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05325 3845155d1db161bc843f88a6e046b65d 307 SUPERFAMILY SSF52540 1 240 1.68E-75 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05325 3845155d1db161bc843f88a6e046b65d 307 SMART SM00382 26 212 1.5E-19 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS05325 3845155d1db161bc843f88a6e046b65d 307 Pfam PF00005 ABC transporter 17 163 2.6E-38 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS06065 d3a07731fb6e72a7bc696e65a7c21022 781 Gene3D G3DSA:3.40.50.300 608 755 8.7E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06065 d3a07731fb6e72a7bc696e65a7c21022 781 SUPERFAMILY SSF52540 533 780 1.57E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06065 d3a07731fb6e72a7bc696e65a7c21022 781 SMART SM00487 330 500 4.5E-23 T 09-03-2017 IPR014001 Helicase superfamily 1/2, ATP-binding domain LS838_RS06065 d3a07731fb6e72a7bc696e65a7c21022 781 Pfam PF08455 Bacterial SNF2 helicase associated 49 320 4.3E-49 T 09-03-2017 IPR013663 Helicase, SWF/SNF/SWI type, bacterial LS838_RS06065 d3a07731fb6e72a7bc696e65a7c21022 781 Pfam PF00176 SNF2 family N-terminal domain 348 602 1.6E-50 T 09-03-2017 IPR000330 SNF2-related, N-terminal domain GO:0005524 LS838_RS06065 d3a07731fb6e72a7bc696e65a7c21022 781 Pfam PF00271 Helicase conserved C-terminal domain 613 726 3.8E-18 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS06065 d3a07731fb6e72a7bc696e65a7c21022 781 SMART SM00490 642 726 3.8E-23 T 09-03-2017 IPR001650 Helicase, C-terminal LS838_RS06065 d3a07731fb6e72a7bc696e65a7c21022 781 SUPERFAMILY SSF52540 311 531 6.87E-46 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06065 d3a07731fb6e72a7bc696e65a7c21022 781 Gene3D G3DSA:3.40.50.300 326 465 5.6E-21 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02565 2d7b68af55231f02d4209b5291019f52 304 SUPERFAMILY SSF53448 1 279 1.69E-67 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS02565 2d7b68af55231f02d4209b5291019f52 304 Pfam PF00483 Nucleotidyl transferase 5 268 2.6E-34 T 09-03-2017 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 LS838_RS02565 2d7b68af55231f02d4209b5291019f52 304 Gene3D G3DSA:3.90.550.10 3 282 1.1E-71 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS02565 2d7b68af55231f02d4209b5291019f52 304 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 267 1.3E-110 T 09-03-2017 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 LS838_RS05255 7ad0819f4946f9800d1415682a06e876 190 Gene3D G3DSA:3.40.630.30 3 175 4.6E-39 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS05255 7ad0819f4946f9800d1415682a06e876 190 SUPERFAMILY SSF55729 4 172 2.06E-26 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS05255 7ad0819f4946f9800d1415682a06e876 190 Pfam PF13420 Acetyltransferase (GNAT) domain 6 166 1.4E-44 T 09-03-2017 LS838_RS05165 283a8c679f9797369fcdd163eea9ce67 186 Pfam PF13302 Acetyltransferase (GNAT) domain 12 150 3.0E-21 T 09-03-2017 IPR000182 GNAT domain GO:0008080 LS838_RS05165 283a8c679f9797369fcdd163eea9ce67 186 SUPERFAMILY SSF55729 7 174 2.02E-42 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS05165 283a8c679f9797369fcdd163eea9ce67 186 Gene3D G3DSA:3.40.630.30 7 175 5.4E-47 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS09405 b30732e50b8b82a167f12e818cec7276 249 Pfam PF07722 Peptidase C26 5 220 3.0E-64 T 09-03-2017 IPR011697 Peptidase C26 GO:0006541|GO:0016787 LS838_RS09405 b30732e50b8b82a167f12e818cec7276 249 Gene3D G3DSA:3.40.50.880 2 248 1.1E-51 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS09405 b30732e50b8b82a167f12e818cec7276 249 SUPERFAMILY SSF52317 27 245 3.36E-36 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS01840 23e422b43cce58494c5c300043bd1973 205 SUPERFAMILY SSF52166 1 204 1.06E-76 T 09-03-2017 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 LS838_RS01840 23e422b43cce58494c5c300043bd1973 205 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 205 35.883 T 09-03-2017 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01840 23e422b43cce58494c5c300043bd1973 205 Pfam PF00573 Ribosomal protein L4/L1 family 17 202 1.0E-65 T 09-03-2017 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 LS838_RS01840 23e422b43cce58494c5c300043bd1973 205 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 202 1.5E-78 T 09-03-2017 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01840 23e422b43cce58494c5c300043bd1973 205 Gene3D G3DSA:3.40.1370.10 58 205 1.5E-62 T 09-03-2017 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 LS838_RS01580 51711b457cc69c9aae4748e8d8d5f0e3 190 Pfam PF01751 Toprim domain 8 74 3.0E-6 T 09-03-2017 IPR006171 Toprim domain LS838_RS01580 51711b457cc69c9aae4748e8d8d5f0e3 190 SUPERFAMILY SSF110455 4 117 2.35E-31 T 09-03-2017 LS838_RS01580 51711b457cc69c9aae4748e8d8d5f0e3 190 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 6 177 1.2E-40 T 09-03-2017 IPR004466 Ribonuclease M5 GO:0043822 LS838_RS01580 51711b457cc69c9aae4748e8d8d5f0e3 190 Hamap MF_01469 Ribonuclease M5 [rnmV]. 4 180 27.716 T 09-03-2017 IPR004466 Ribonuclease M5 GO:0043822 LS838_RS01580 51711b457cc69c9aae4748e8d8d5f0e3 190 SMART SM00493 6 80 1.4E-8 T 09-03-2017 IPR006171 Toprim domain LS838_RS01580 51711b457cc69c9aae4748e8d8d5f0e3 190 Pfam PF13331 Domain of unknown function (DUF4093) 95 178 3.2E-23 T 09-03-2017 IPR025156 Ribonuclease M5, C-terminal domain LS838_RS01580 51711b457cc69c9aae4748e8d8d5f0e3 190 Gene3D G3DSA:3.40.1360.20 4 119 6.8E-36 T 09-03-2017 LS838_RS06590 27a8c06eedb72b72d4ce9521d1ce40a6 320 PRINTS PR00701 60kDa inner membrane protein signature 226 249 4.5E-8 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LS838_RS06590 27a8c06eedb72b72d4ce9521d1ce40a6 320 PRINTS PR00701 60kDa inner membrane protein signature 143 166 4.5E-8 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LS838_RS06590 27a8c06eedb72b72d4ce9521d1ce40a6 320 Pfam PF02096 60Kd inner membrane protein 71 258 1.2E-35 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LS838_RS06590 27a8c06eedb72b72d4ce9521d1ce40a6 320 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 70 259 1.2E-39 T 09-03-2017 IPR028055 Membrane insertase YidC/Oxa1, C-terminal LS838_RS08600 d2166d319b891ff225ca21d763dbe543 349 PIRSF PIRSF007023 1 349 2.9E-81 T 09-03-2017 IPR016503 UDP-galactofuranosyltransferase GO:0016757 LS838_RS08600 d2166d319b891ff225ca21d763dbe543 349 SUPERFAMILY SSF53756 39 329 1.7E-7 T 09-03-2017 LS838_RS07880 9896e8010a7eddae08b4d73385b1b456 359 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 147 165 4.4E-57 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS07880 9896e8010a7eddae08b4d73385b1b456 359 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 102 118 4.4E-57 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS07880 9896e8010a7eddae08b4d73385b1b456 359 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 4.4E-57 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS07880 9896e8010a7eddae08b4d73385b1b456 359 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 129 146 4.4E-57 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS07880 9896e8010a7eddae08b4d73385b1b456 359 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 185 202 4.4E-57 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS07880 9896e8010a7eddae08b4d73385b1b456 359 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 167 183 4.4E-57 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS07880 9896e8010a7eddae08b4d73385b1b456 359 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 221 233 4.4E-57 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS07880 9896e8010a7eddae08b4d73385b1b456 359 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 272 294 4.4E-57 T 09-03-2017 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS07880 9896e8010a7eddae08b4d73385b1b456 359 PIRSF PIRSF000532 1 358 5.2E-104 T 09-03-2017 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 LS838_RS07880 9896e8010a7eddae08b4d73385b1b456 359 Gene3D G3DSA:3.40.50.450 3 221 1.7E-67 T 09-03-2017 LS838_RS07880 9896e8010a7eddae08b4d73385b1b456 359 Pfam PF00365 Phosphofructokinase 4 306 1.0E-90 T 09-03-2017 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS07880 9896e8010a7eddae08b4d73385b1b456 359 SUPERFAMILY SSF53784 3 345 2.35E-102 T 09-03-2017 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS07880 9896e8010a7eddae08b4d73385b1b456 359 ProSitePatterns PS00433 Phosphofructokinase signature. 276 294 - T 09-03-2017 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 LS838_RS09175 7a5a6a7b8022e11ec6b5b03f398c315c 182 Pfam PF13305 WHG domain 87 159 7.3E-10 T 09-03-2017 IPR025996 WHG domain LS838_RS09175 7a5a6a7b8022e11ec6b5b03f398c315c 182 SUPERFAMILY SSF48498 80 166 1.71E-5 T 09-03-2017 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal LS838_RS09175 7a5a6a7b8022e11ec6b5b03f398c315c 182 Gene3D G3DSA:1.10.357.10 2 172 3.9E-18 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LS838_RS09175 7a5a6a7b8022e11ec6b5b03f398c315c 182 SUPERFAMILY SSF46689 2 71 7.7E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS07750 6aa470267ca96052ffded7f934ac6a3a 246 SUPERFAMILY SSF56601 14 228 5.63E-22 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS07750 6aa470267ca96052ffded7f934ac6a3a 246 Pfam PF13354 Beta-lactamase enzyme family 37 207 9.3E-30 T 09-03-2017 LS838_RS07750 6aa470267ca96052ffded7f934ac6a3a 246 Gene3D G3DSA:3.40.710.10 5 227 2.0E-25 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS09385 350e6686c6656cc4de65ba604aa86375 454 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 15 425 1.3E-106 T 09-03-2017 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 LS838_RS09385 350e6686c6656cc4de65ba604aa86375 454 Pfam PF05525 Branched-chain amino acid transport protein 6 438 1.1E-124 T 09-03-2017 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 LS838_RS04790 9a6bc61451662c7852d2350e3c54fbbe 441 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 300 372 2.2E-10 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS04790 9a6bc61451662c7852d2350e3c54fbbe 441 Pfam PF01385 Probable transposase 206 331 2.7E-15 T 09-03-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 LS838_RS04790 9a6bc61451662c7852d2350e3c54fbbe 441 Pfam PF07282 Putative transposase DNA-binding domain 345 428 8.4E-11 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS04790 9a6bc61451662c7852d2350e3c54fbbe 441 Pfam PF12323 Helix-turn-helix domain 1 45 5.8E-8 T 09-03-2017 IPR021027 Transposase, putative, helix-turn-helix domain LS838_RS01505 cee60f58eb075088e8c6ae472c03585d 69 Gene3D G3DSA:1.20.5.130 27 68 8.8E-12 T 09-03-2017 IPR023388 Bacteriocin class IIa domain LS838_RS01505 cee60f58eb075088e8c6ae472c03585d 69 Pfam PF01721 Class II bacteriocin 27 60 1.3E-11 T 09-03-2017 IPR002633 Bacteriocin, class IIa GO:0005576|GO:0042742 LS838_RS01505 cee60f58eb075088e8c6ae472c03585d 69 ProSitePatterns PS60030 Bacteriocin class IIa family signature. 28 39 - T 09-03-2017 IPR023384 Bacteriocin, class IIa, conserved site LS838_RS08845 7e9a8c2b5b4b24304ceb414ba8e9c5c8 485 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 328 468 6.6E-15 T 09-03-2017 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain LS838_RS08845 7e9a8c2b5b4b24304ceb414ba8e9c5c8 485 Pfam PF01943 Polysaccharide biosynthesis protein 9 274 5.8E-25 T 09-03-2017 IPR002797 Polysaccharide biosynthesis protein GO:0016020 LS838_RS02855 97eb18d06360d44b0fc475dcb38f2ce6 310 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 4 309 32.477 T 09-03-2017 IPR003802 Sporulation regulator WhiA GO:0043937 LS838_RS02855 97eb18d06360d44b0fc475dcb38f2ce6 310 Pfam PF02650 WhiA C-terminal HTH domain 222 306 2.0E-35 T 09-03-2017 IPR023054 Sporulation regulator WhiA, C-terminal LS838_RS02855 97eb18d06360d44b0fc475dcb38f2ce6 310 SUPERFAMILY SSF55608 120 223 5.16E-14 T 09-03-2017 IPR027434 Homing endonuclease GO:0004519 LS838_RS02855 97eb18d06360d44b0fc475dcb38f2ce6 310 Gene3D G3DSA:3.10.28.10 114 202 1.9E-6 T 09-03-2017 IPR027434 Homing endonuclease GO:0004519 LS838_RS02855 97eb18d06360d44b0fc475dcb38f2ce6 310 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 5 307 3.3E-121 T 09-03-2017 LS838_RS02855 97eb18d06360d44b0fc475dcb38f2ce6 310 Pfam PF14527 WhiA LAGLIDADG-like domain 127 219 9.9E-36 T 09-03-2017 LS838_RS02855 97eb18d06360d44b0fc475dcb38f2ce6 310 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 20 103 3.2E-30 T 09-03-2017 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain LS838_RS00610 ca8823587a4b81132b9eec4bd2d9292d 404 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 09-03-2017 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 LS838_RS00610 ca8823587a4b81132b9eec4bd2d9292d 404 Gene3D G3DSA:1.20.1250.20 10 196 1.7E-21 T 09-03-2017 LS838_RS00610 ca8823587a4b81132b9eec4bd2d9292d 404 SUPERFAMILY SSF103473 6 396 1.44E-41 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS00610 ca8823587a4b81132b9eec4bd2d9292d 404 Gene3D G3DSA:1.20.1250.20 228 367 5.5E-15 T 09-03-2017 LS838_RS00610 ca8823587a4b81132b9eec4bd2d9292d 404 Pfam PF07690 Major Facilitator Superfamily 14 361 5.0E-28 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LS838_RS09335 1dab1075bf33c805b096879432661390 737 Gene3D G3DSA:3.30.200.20 206 282 2.9E-6 T 09-03-2017 LS838_RS09335 1dab1075bf33c805b096879432661390 737 SUPERFAMILY SSF56112 207 408 8.4E-22 T 09-03-2017 IPR011009 Protein kinase-like domain LS838_RS09335 1dab1075bf33c805b096879432661390 737 Pfam PF00069 Protein kinase domain 221 370 1.3E-9 T 09-03-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 LS838_RS09335 1dab1075bf33c805b096879432661390 737 Gene3D G3DSA:1.10.510.10 283 377 6.2E-8 T 09-03-2017 LS838_RS09335 1dab1075bf33c805b096879432661390 737 SUPERFAMILY SSF158745 610 731 5.62E-8 T 09-03-2017 LS838_RS09335 1dab1075bf33c805b096879432661390 737 SMART SM00220 211 556 3.7E-5 T 09-03-2017 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 LS838_RS00775 47daf0aff52d02d039fcae47b568fc0f 491 SUPERFAMILY SSF103473 1 199 1.09E-58 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS00775 47daf0aff52d02d039fcae47b568fc0f 491 SUPERFAMILY SSF103473 456 486 1.09E-58 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS00775 47daf0aff52d02d039fcae47b568fc0f 491 SUPERFAMILY SSF103473 243 413 1.09E-58 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS00775 47daf0aff52d02d039fcae47b568fc0f 491 Pfam PF07690 Major Facilitator Superfamily 13 403 5.9E-40 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LS838_RS00775 47daf0aff52d02d039fcae47b568fc0f 491 Gene3D G3DSA:1.20.1250.20 10 188 2.0E-30 T 09-03-2017 LS838_RS00775 47daf0aff52d02d039fcae47b568fc0f 491 Gene3D G3DSA:1.20.1250.20 458 486 8.4E-16 T 09-03-2017 LS838_RS00775 47daf0aff52d02d039fcae47b568fc0f 491 Gene3D G3DSA:1.20.1250.20 261 414 8.4E-16 T 09-03-2017 LS838_RS00930 efb25d7d27fb971ccee8186ec4b27bb4 362 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 7 347 3.6E-96 T 09-03-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS00930 efb25d7d27fb971ccee8186ec4b27bb4 362 SUPERFAMILY SSF52440 4 128 1.63E-30 T 09-03-2017 IPR016185 Pre-ATP-grasp domain LS838_RS00930 efb25d7d27fb971ccee8186ec4b27bb4 362 Pfam PF07478 D-ala D-ala ligase C-terminus 136 344 2.8E-65 T 09-03-2017 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS00930 efb25d7d27fb971ccee8186ec4b27bb4 362 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 5 348 37.275 T 09-03-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS00930 efb25d7d27fb971ccee8186ec4b27bb4 362 Gene3D G3DSA:3.30.470.20 220 360 4.6E-47 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LS838_RS00930 efb25d7d27fb971ccee8186ec4b27bb4 362 Gene3D G3DSA:3.30.1490.20 140 219 6.8E-21 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LS838_RS00930 efb25d7d27fb971ccee8186ec4b27bb4 362 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 96 107 - T 09-03-2017 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS00930 efb25d7d27fb971ccee8186ec4b27bb4 362 Gene3D G3DSA:3.40.50.20 3 118 5.3E-29 T 09-03-2017 IPR016185 Pre-ATP-grasp domain LS838_RS00930 efb25d7d27fb971ccee8186ec4b27bb4 362 Pfam PF01820 D-ala D-ala ligase N-terminus 6 118 2.2E-25 T 09-03-2017 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS00930 efb25d7d27fb971ccee8186ec4b27bb4 362 SUPERFAMILY SSF56059 129 351 2.23E-51 T 09-03-2017 LS838_RS00930 efb25d7d27fb971ccee8186ec4b27bb4 362 PIRSF PIRSF039102 2 356 1.4E-109 T 09-03-2017 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 LS838_RS01160 f9f3a3b191a058a05f23ace1ab3cb9ff 673 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 7 652 26.906 T 09-03-2017 IPR023051 Potassium uptake protein, low affinity, Kup LS838_RS01160 f9f3a3b191a058a05f23ace1ab3cb9ff 673 Pfam PF02705 K+ potassium transporter 16 556 2.4E-166 T 09-03-2017 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 LS838_RS04040 fad42db961ed4dc14b1ac0af9f37f7f9 452 Pfam PF06738 Putative threonine/serine exporter 47 293 1.4E-63 T 09-03-2017 IPR010619 Putative threonine/serine exporter LS838_RS04040 fad42db961ed4dc14b1ac0af9f37f7f9 452 Pfam PF12821 Threonine/Serine exporter, ThrE 315 440 3.5E-16 T 09-03-2017 IPR024528 Threonine/Serine exporter, ThrE LS838_RS03250 40f7f0217ea950e1239c96fb36d0a3b5 95 SMART SM01234 1 68 6.4E-44 T 09-03-2017 IPR002696 Putative membrane protein insertion efficiency factor LS838_RS03250 40f7f0217ea950e1239c96fb36d0a3b5 95 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 8.0E-15 T 09-03-2017 IPR002696 Putative membrane protein insertion efficiency factor LS838_RS03250 40f7f0217ea950e1239c96fb36d0a3b5 95 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 24.965 T 09-03-2017 IPR002696 Putative membrane protein insertion efficiency factor LS838_RS03250 40f7f0217ea950e1239c96fb36d0a3b5 95 Pfam PF01809 Haemolytic domain 3 68 2.6E-29 T 09-03-2017 IPR002696 Putative membrane protein insertion efficiency factor LS838_RS03250 40f7f0217ea950e1239c96fb36d0a3b5 95 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 71 5.9E-29 T 09-03-2017 IPR002696 Putative membrane protein insertion efficiency factor LS838_RS02955 b93a64b6a708bcd722093dc966890ade 270 Gene3D G3DSA:1.10.3720.10 5 265 3.2E-46 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS02955 b93a64b6a708bcd722093dc966890ade 270 SUPERFAMILY SSF161098 2 261 3.14E-50 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS02955 b93a64b6a708bcd722093dc966890ade 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 51 259 2.0E-5 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS03870 29dcd41aaf4026855f31e616cfb053f0 417 Gene3D G3DSA:1.25.40.10 186 412 2.2E-28 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LS838_RS03870 29dcd41aaf4026855f31e616cfb053f0 417 Gene3D G3DSA:1.25.40.10 15 185 5.6E-11 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LS838_RS03870 29dcd41aaf4026855f31e616cfb053f0 417 Pfam PF13174 Tetratricopeptide repeat 204 235 0.0017 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LS838_RS03870 29dcd41aaf4026855f31e616cfb053f0 417 SMART SM00028 338 371 10.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LS838_RS03870 29dcd41aaf4026855f31e616cfb053f0 417 SMART SM00028 271 304 11.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LS838_RS03870 29dcd41aaf4026855f31e616cfb053f0 417 SMART SM00028 203 236 11.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LS838_RS03870 29dcd41aaf4026855f31e616cfb053f0 417 SMART SM00028 237 270 130.0 T 09-03-2017 IPR019734 Tetratricopeptide repeat GO:0005515 LS838_RS03870 29dcd41aaf4026855f31e616cfb053f0 417 Pfam PF14559 Tetratricopeptide repeat 283 341 7.1E-8 T 09-03-2017 LS838_RS03870 29dcd41aaf4026855f31e616cfb053f0 417 SUPERFAMILY SSF48452 204 365 2.66E-24 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LS838_RS03870 29dcd41aaf4026855f31e616cfb053f0 417 SUPERFAMILY SSF48452 16 160 9.87E-9 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LS838_RS05795 66284b6d0db5ab599068f6edb8902fdf 202 Pfam PF14014 Protein of unknown function (DUF4230) 55 188 8.6E-26 T 09-03-2017 IPR025324 Protein of unknown function DUF4230 LS838_RS02100 6ef3c035c4b5904f452eebd95b930782 233 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 20 91 4.7E-14 T 09-03-2017 IPR007577 Glycosyltransferase, DXD sugar-binding motif LS838_RS02100 6ef3c035c4b5904f452eebd95b930782 233 SUPERFAMILY SSF53448 1 228 2.67E-62 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS03190 8c683b7b02f9b7c0948d44015c4ec92a 331 SUPERFAMILY SSF55821 9 206 3.97E-61 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain LS838_RS03190 8c683b7b02f9b7c0948d44015c4ec92a 331 Gene3D G3DSA:3.90.870.10 3 200 1.8E-74 T 09-03-2017 IPR017945 DHBP synthase RibB-like alpha/beta domain LS838_RS03190 8c683b7b02f9b7c0948d44015c4ec92a 331 Pfam PF01300 Telomere recombination 17 193 1.3E-56 T 09-03-2017 IPR006070 YrdC-like domain GO:0003725 LS838_RS03190 8c683b7b02f9b7c0948d44015c4ec92a 331 Pfam PF03481 Putative GTP-binding controlling metal-binding 195 327 7.9E-25 T 09-03-2017 IPR005145 Putative GTP-binding controlling metal-binding domain LS838_RS03190 8c683b7b02f9b7c0948d44015c4ec92a 331 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 4 204 1.1E-60 T 09-03-2017 IPR006070 YrdC-like domain GO:0003725 LS838_RS03190 8c683b7b02f9b7c0948d44015c4ec92a 331 PIRSF PIRSF004930 1 331 3.1E-118 T 09-03-2017 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 LS838_RS05975 a204dbece912d3d3ca63899f9085bbb1 204 SUPERFAMILY SSF69593 6 196 1.06E-36 T 09-03-2017 LS838_RS05975 a204dbece912d3d3ca63899f9085bbb1 204 Gene3D G3DSA:3.40.1130.10 5 196 7.2E-11 T 09-03-2017 LS838_RS05975 a204dbece912d3d3ca63899f9085bbb1 204 Pfam PF01553 Acyltransferase 20 141 2.7E-15 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LS838_RS05975 a204dbece912d3d3ca63899f9085bbb1 204 SMART SM00563 34 144 1.7E-20 T 09-03-2017 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 LS838_RS09645 551801696e50e3b38142a7fe736f2462 364 SUPERFAMILY SSF53822 57 275 1.23E-11 T 09-03-2017 IPR028082 Periplasmic binding protein-like I LS838_RS09645 551801696e50e3b38142a7fe736f2462 364 Pfam PF02608 Basic membrane protein 43 359 3.1E-55 T 09-03-2017 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 LS838_RS09645 551801696e50e3b38142a7fe736f2462 364 Gene3D G3DSA:3.40.50.2300 38 165 5.4E-44 T 09-03-2017 LS838_RS09645 551801696e50e3b38142a7fe736f2462 364 Gene3D G3DSA:3.40.50.2300 166 331 1.1E-46 T 09-03-2017 LS838_RS07465 7582afcda04af9df9cbc25b17f719155 188 Gene3D G3DSA:3.90.79.10 43 182 3.8E-21 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LS838_RS07465 7582afcda04af9df9cbc25b17f719155 188 SUPERFAMILY SSF55811 43 174 1.49E-18 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LS838_RS07465 7582afcda04af9df9cbc25b17f719155 188 Pfam PF00293 NUDIX domain 45 166 5.7E-9 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LS838_RS02915 f2df804a58ac84d960d893314fd80575 189 SUPERFAMILY SSF54518 13 152 2.88E-7 T 09-03-2017 IPR025659 Tubby C-terminal-like domain LS838_RS01440 7f4b86bff3f598e5a2c5e7fa32ad8b7f 150 Pfam PF01047 MarR family 27 86 7.0E-7 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LS838_RS01440 7f4b86bff3f598e5a2c5e7fa32ad8b7f 150 SUPERFAMILY SSF46785 2 139 1.2E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS01440 7f4b86bff3f598e5a2c5e7fa32ad8b7f 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 09-03-2017 IPR023187 Transcriptional regulator MarR-type, conserved site LS838_RS01440 7f4b86bff3f598e5a2c5e7fa32ad8b7f 150 SMART SM00347 20 122 4.3E-15 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LS838_RS01440 7f4b86bff3f598e5a2c5e7fa32ad8b7f 150 Gene3D G3DSA:1.10.10.10 2 134 7.7E-32 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS01440 7f4b86bff3f598e5a2c5e7fa32ad8b7f 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 5.0E-6 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LS838_RS01440 7f4b86bff3f598e5a2c5e7fa32ad8b7f 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 5.0E-6 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LS838_RS01440 7f4b86bff3f598e5a2c5e7fa32ad8b7f 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 5.0E-6 T 09-03-2017 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 LS838_RS08725 d11b2b0d8b947f74265448009fa3b415 144 Gene3D G3DSA:3.40.50.300 10 115 2.1E-27 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08725 d11b2b0d8b947f74265448009fa3b415 144 Pfam PF00005 ABC transporter 18 55 4.9E-6 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS08725 d11b2b0d8b947f74265448009fa3b415 144 SUPERFAMILY SSF52540 9 113 4.17E-26 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06410 241950aacd7958449a0412c226e51be6 84 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 11 79 4.4E-25 T 09-03-2017 IPR018656 Domain of unknown function DUF2087 LS838_RS02160 fcd4e6f4e4e6e158beb12cfa765cfe9e 381 Gene3D G3DSA:3.10.570.10 59 378 1.8E-114 T 09-03-2017 LS838_RS02160 fcd4e6f4e4e6e158beb12cfa765cfe9e 381 Pfam PF07537 CamS sex pheromone cAM373 precursor 61 368 8.7E-108 T 09-03-2017 IPR011426 CamS sex pheromone cAM373 LS838_RS02160 fcd4e6f4e4e6e158beb12cfa765cfe9e 381 PIRSF PIRSF012509 1 379 3.4E-117 T 09-03-2017 IPR011426 CamS sex pheromone cAM373 LS838_RS06650 ac2d0edae741bb85643d425939ca11ac 62 Gene3D G3DSA:3.90.1170.10 20 59 6.1E-5 T 09-03-2017 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 LS838_RS03520 fe227fe7ae54f6a5adb89b4ee58187df 346 Gene3D G3DSA:2.30.42.10 123 198 6.4E-13 T 09-03-2017 IPR001478 PDZ domain GO:0005515 LS838_RS03520 fe227fe7ae54f6a5adb89b4ee58187df 346 Pfam PF13180 PDZ domain 130 198 2.2E-13 T 09-03-2017 IPR001478 PDZ domain GO:0005515 LS838_RS03520 fe227fe7ae54f6a5adb89b4ee58187df 346 SUPERFAMILY SSF54211 232 341 2.96E-19 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LS838_RS03520 fe227fe7ae54f6a5adb89b4ee58187df 346 Gene3D G3DSA:3.30.230.10 233 341 1.0E-21 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LS838_RS03520 fe227fe7ae54f6a5adb89b4ee58187df 346 SUPERFAMILY SSF50156 134 217 1.08E-13 T 09-03-2017 IPR001478 PDZ domain GO:0005515 LS838_RS03520 fe227fe7ae54f6a5adb89b4ee58187df 346 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 236 339 1.0E-7 T 09-03-2017 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 LS838_RS00505 6d2c2f967d714eda50d58aaab22a10f4 143 PIRSF PIRSF004749 1 143 2.3E-30 T 09-03-2017 IPR023635 Peptide deformylase LS838_RS00505 6d2c2f967d714eda50d58aaab22a10f4 143 SUPERFAMILY SSF56420 16 143 1.57E-35 T 09-03-2017 IPR023635 Peptide deformylase LS838_RS00505 6d2c2f967d714eda50d58aaab22a10f4 143 Pfam PF01327 Polypeptide deformylase 9 143 2.2E-25 T 09-03-2017 IPR023635 Peptide deformylase LS838_RS00505 6d2c2f967d714eda50d58aaab22a10f4 143 Gene3D G3DSA:3.90.45.10 2 143 2.5E-34 T 09-03-2017 IPR023635 Peptide deformylase LS838_RS00505 6d2c2f967d714eda50d58aaab22a10f4 143 PRINTS PR01576 Peptide deformylase signature 37 66 3.3E-12 T 09-03-2017 IPR023635 Peptide deformylase LS838_RS00505 6d2c2f967d714eda50d58aaab22a10f4 143 PRINTS PR01576 Peptide deformylase signature 120 143 3.3E-12 T 09-03-2017 IPR023635 Peptide deformylase LS838_RS00505 6d2c2f967d714eda50d58aaab22a10f4 143 PRINTS PR01576 Peptide deformylase signature 90 101 3.3E-12 T 09-03-2017 IPR023635 Peptide deformylase LS838_RS04455 ed88341b8c149460519971ace1a4d1e5 311 Pfam PF02833 DHHA2 domain 183 308 3.1E-19 T 09-03-2017 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 LS838_RS04455 ed88341b8c149460519971ace1a4d1e5 311 Gene3D G3DSA:3.90.1640.10 3 187 1.0E-66 T 09-03-2017 LS838_RS04455 ed88341b8c149460519971ace1a4d1e5 311 Hamap MF_00207 Probable manganese-dependent inorganic pyrophosphatase [ppaC]. 3 311 43.13 T 09-03-2017 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable GO:0004427 KEGG: 00190+3.6.1.1 LS838_RS04455 ed88341b8c149460519971ace1a4d1e5 311 SMART SM01131 181 309 1.4E-57 T 09-03-2017 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 LS838_RS04455 ed88341b8c149460519971ace1a4d1e5 311 Pfam PF01368 DHH family 5 146 7.0E-27 T 09-03-2017 IPR001667 DDH domain LS838_RS04455 ed88341b8c149460519971ace1a4d1e5 311 SUPERFAMILY SSF64182 3 309 3.53E-81 T 09-03-2017 LS838_RS01195 a0e1d6ed43f1f76a12afab0886c71e14 523 Pfam PF03217 Bacterial surface layer protein 272 391 8.2E-36 T 09-03-2017 IPR024968 SLAP domain, Lactobacillus LS838_RS01195 a0e1d6ed43f1f76a12afab0886c71e14 523 Pfam PF03217 Bacterial surface layer protein 404 522 3.5E-38 T 09-03-2017 IPR024968 SLAP domain, Lactobacillus LS838_RS01195 a0e1d6ed43f1f76a12afab0886c71e14 523 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 82 211 4.4E-6 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LS838_RS01195 a0e1d6ed43f1f76a12afab0886c71e14 523 SMART SM00644 69 212 1.5E-21 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LS838_RS01195 a0e1d6ed43f1f76a12afab0886c71e14 523 Gene3D G3DSA:3.40.80.10 73 220 1.3E-9 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LS838_RS01195 a0e1d6ed43f1f76a12afab0886c71e14 523 SUPERFAMILY SSF55846 73 232 5.28E-31 T 09-03-2017 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 LS838_RS08950 813ee37b690d24900bf7a5598a704d89 260 Pfam PF00877 NlpC/P60 family 154 253 1.4E-24 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain LS838_RS08950 813ee37b690d24900bf7a5598a704d89 260 SUPERFAMILY SSF54001 139 251 3.53E-37 T 09-03-2017 LS838_RS08950 813ee37b690d24900bf7a5598a704d89 260 Gene3D G3DSA:3.90.1720.10 135 248 3.1E-39 T 09-03-2017 IPR000064 Endopeptidase, NLPC/P60 domain LS838_RS06265 425efa009f874753117aac5ed524a385 79 SUPERFAMILY SSF116842 3 71 4.18E-18 T 09-03-2017 LS838_RS06265 425efa009f874753117aac5ed524a385 79 Pfam PF02609 Exonuclease VII small subunit 7 57 6.1E-18 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LS838_RS06265 425efa009f874753117aac5ed524a385 79 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 6 66 14.2 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LS838_RS06265 425efa009f874753117aac5ed524a385 79 Gene3D G3DSA:1.10.287.1040 3 73 1.3E-22 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LS838_RS06265 425efa009f874753117aac5ed524a385 79 PIRSF PIRSF006488 1 77 8.5E-20 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LS838_RS06265 425efa009f874753117aac5ed524a385 79 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 4 47 3.0E-9 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LS838_RS06265 425efa009f874753117aac5ed524a385 79 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 6 61 3.0E-20 T 09-03-2017 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 LS838_RS01575 61747570e2d21d152b6abeaa2c309869 259 Gene3D G3DSA:3.20.20.140 1 255 1.7E-83 T 09-03-2017 LS838_RS01575 61747570e2d21d152b6abeaa2c309869 259 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 09-03-2017 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 LS838_RS01575 61747570e2d21d152b6abeaa2c309869 259 SUPERFAMILY SSF51556 1 254 2.81E-84 T 09-03-2017 IPR032466 Metal-dependent hydrolase LS838_RS01575 61747570e2d21d152b6abeaa2c309869 259 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 253 1.1E-74 T 09-03-2017 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 LS838_RS01575 61747570e2d21d152b6abeaa2c309869 259 Pfam PF01026 TatD related DNase 5 252 1.0E-72 T 09-03-2017 IPR001130 TatD family GO:0016788 LS838_RS01575 61747570e2d21d152b6abeaa2c309869 259 PIRSF PIRSF005902 1 257 1.8E-74 T 09-03-2017 IPR001130 TatD family GO:0016788 LS838_RS06595 3ca5e922b4e96f1f6b923a3abe5df55b 530 SMART SM00388 278 345 1.2E-19 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS06595 3ca5e922b4e96f1f6b923a3abe5df55b 530 SMART SM00304 223 277 8.5E-10 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LS838_RS06595 3ca5e922b4e96f1f6b923a3abe5df55b 530 Gene3D G3DSA:3.30.565.10 333 506 1.4E-41 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS06595 3ca5e922b4e96f1f6b923a3abe5df55b 530 Gene3D G3DSA:1.10.287.130 268 332 2.3E-18 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS06595 3ca5e922b4e96f1f6b923a3abe5df55b 530 SUPERFAMILY SSF47384 261 343 1.22E-18 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS06595 3ca5e922b4e96f1f6b923a3abe5df55b 530 SUPERFAMILY SSF158472 223 276 4.05E-9 T 09-03-2017 LS838_RS06595 3ca5e922b4e96f1f6b923a3abe5df55b 530 Pfam PF00672 HAMP domain 203 273 1.8E-14 T 09-03-2017 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 LS838_RS06595 3ca5e922b4e96f1f6b923a3abe5df55b 530 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 394 501 1.6E-21 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS06595 3ca5e922b4e96f1f6b923a3abe5df55b 530 Pfam PF00512 His Kinase A (phospho-acceptor) domain 279 344 3.5E-17 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS06595 3ca5e922b4e96f1f6b923a3abe5df55b 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 456 4.6E-16 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LS838_RS06595 3ca5e922b4e96f1f6b923a3abe5df55b 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 500 4.6E-16 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LS838_RS06595 3ca5e922b4e96f1f6b923a3abe5df55b 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 442 4.6E-16 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LS838_RS06595 3ca5e922b4e96f1f6b923a3abe5df55b 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 481 4.6E-16 T 09-03-2017 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 LS838_RS06595 3ca5e922b4e96f1f6b923a3abe5df55b 530 SMART SM00387 391 503 2.6E-32 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS06595 3ca5e922b4e96f1f6b923a3abe5df55b 530 SUPERFAMILY SSF55874 335 506 2.1E-38 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS01085 13baf21698e5d4931cfdd2f4e6596ff2 256 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS01085 13baf21698e5d4931cfdd2f4e6596ff2 256 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 6 248 3.8E-104 T 09-03-2017 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 LS838_RS01085 13baf21698e5d4931cfdd2f4e6596ff2 256 Gene3D G3DSA:3.40.50.300 3 238 7.8E-70 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01085 13baf21698e5d4931cfdd2f4e6596ff2 256 Pfam PF00005 ABC transporter 23 179 6.3E-38 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS01085 13baf21698e5d4931cfdd2f4e6596ff2 256 SMART SM00382 32 236 2.9E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS01085 13baf21698e5d4931cfdd2f4e6596ff2 256 SUPERFAMILY SSF52540 6 240 3.64E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02695 59d81bf0307e78391649a2e650118f16 336 Pfam PF10282 Lactonase, 7-bladed beta-propeller 3 334 6.2E-102 T 09-03-2017 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31 LS838_RS02695 59d81bf0307e78391649a2e650118f16 336 SUPERFAMILY SSF50974 45 322 2.12E-40 T 09-03-2017 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 LS838_RS02695 59d81bf0307e78391649a2e650118f16 336 Gene3D G3DSA:2.130.10.10 2 334 1.3E-70 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LS838_RS06685 9b6955267a7d2381dde1dc99723af67b 307 Gene3D G3DSA:3.40.50.300 108 295 5.0E-34 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06685 9b6955267a7d2381dde1dc99723af67b 307 Pfam PF01695 IstB-like ATP binding protein 157 275 5.3E-15 T 09-03-2017 IPR002611 IstB-like ATP-binding protein GO:0005524 LS838_RS06685 9b6955267a7d2381dde1dc99723af67b 307 SMART SM00382 157 296 0.0032 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS06685 9b6955267a7d2381dde1dc99723af67b 307 SUPERFAMILY SSF52540 122 273 2.39E-21 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06685 9b6955267a7d2381dde1dc99723af67b 307 Pfam PF07319 Primosomal protein DnaI N-terminus 1 96 2.2E-18 T 09-03-2017 IPR009928 Primosomal DnaI, N-terminal LS838_RS01315 fd6e000f67cee8154172d6f3edefd3af 343 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 35 73 1.4E-10 T 09-03-2017 IPR025966 Oligopeptide transport permease C-like, N-terminal domain LS838_RS01315 fd6e000f67cee8154172d6f3edefd3af 343 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 159 340 2.2E-29 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS01315 fd6e000f67cee8154172d6f3edefd3af 343 Gene3D G3DSA:1.10.3720.10 135 339 1.0E-27 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS01315 fd6e000f67cee8154172d6f3edefd3af 343 SUPERFAMILY SSF161098 136 327 1.83E-28 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS06635 f48b7e2a450553ae407814a875bbd2b6 118 Pfam PF00453 Ribosomal protein L20 3 109 1.0E-42 T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06635 f48b7e2a450553ae407814a875bbd2b6 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.1E-44 T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06635 f48b7e2a450553ae407814a875bbd2b6 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 27.52 T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06635 f48b7e2a450553ae407814a875bbd2b6 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06635 f48b7e2a450553ae407814a875bbd2b6 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.2E-35 T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06635 f48b7e2a450553ae407814a875bbd2b6 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.2E-35 T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06635 f48b7e2a450553ae407814a875bbd2b6 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.2E-35 T 09-03-2017 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS06635 f48b7e2a450553ae407814a875bbd2b6 118 SUPERFAMILY SSF74731 2 117 3.53E-44 T 09-03-2017 LS838_RS06635 f48b7e2a450553ae407814a875bbd2b6 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 23 72 3.0E-20 T 09-03-2017 LS838_RS06635 f48b7e2a450553ae407814a875bbd2b6 118 Gene3D G3DSA:1.10.1900.20 56 117 4.0E-30 T 09-03-2017 LS838_RS08740 4cdcab200a1da05864ba3525f6623b24 324 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 316 1.1E-78 T 09-03-2017 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581 LS838_RS08740 4cdcab200a1da05864ba3525f6623b24 324 Pfam PF04321 RmlD substrate binding domain 1 317 1.5E-84 T 09-03-2017 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581 LS838_RS08740 4cdcab200a1da05864ba3525f6623b24 324 SUPERFAMILY SSF51735 1 317 9.84E-78 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS08740 4cdcab200a1da05864ba3525f6623b24 324 Gene3D G3DSA:3.90.25.10 248 302 1.1E-27 T 09-03-2017 LS838_RS08740 4cdcab200a1da05864ba3525f6623b24 324 Gene3D G3DSA:3.40.50.720 1 212 2.1E-37 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS08045 38863db49a21de3b951b8d7bfa2bf07c 162 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 14 137 3.2E-53 T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LS838_RS08045 38863db49a21de3b951b8d7bfa2bf07c 162 Gene3D G3DSA:2.70.70.10 5 158 3.7E-63 T 09-03-2017 LS838_RS08045 38863db49a21de3b951b8d7bfa2bf07c 162 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 16 135 3.6E-45 T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LS838_RS08045 38863db49a21de3b951b8d7bfa2bf07c 162 SUPERFAMILY SSF51261 3 156 2.22E-55 T 09-03-2017 IPR011055 Duplicated hybrid motif LS838_RS08045 38863db49a21de3b951b8d7bfa2bf07c 162 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 77 89 - T 09-03-2017 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 LS838_RS01860 63fe85faff64ba5a83cee943b30d8f01 117 SUPERFAMILY SSF54843 7 116 1.22E-42 T 09-03-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 LS838_RS01860 63fe85faff64ba5a83cee943b30d8f01 117 Gene3D G3DSA:3.90.470.10 8 115 3.4E-43 T 09-03-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 LS838_RS01860 63fe85faff64ba5a83cee943b30d8f01 117 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 10 112 1.4E-46 T 09-03-2017 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01860 63fe85faff64ba5a83cee943b30d8f01 117 ProSitePatterns PS00464 Ribosomal protein L22 signature. 88 112 - T 09-03-2017 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01860 63fe85faff64ba5a83cee943b30d8f01 117 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 6 115 29.681 T 09-03-2017 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS01860 63fe85faff64ba5a83cee943b30d8f01 117 Pfam PF00237 Ribosomal protein L22p/L17e 13 112 2.3E-32 T 09-03-2017 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 LS838_RS04850 062f6a6dada15e78093272f914a9a3cd 279 Gene3D G3DSA:3.40.50.10490 96 263 1.2E-26 T 09-03-2017 LS838_RS04850 062f6a6dada15e78093272f914a9a3cd 279 Pfam PF01380 SIS domain 126 254 3.4E-18 T 09-03-2017 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 LS838_RS04850 062f6a6dada15e78093272f914a9a3cd 279 Gene3D G3DSA:1.10.10.10 2 76 6.8E-25 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS04850 062f6a6dada15e78093272f914a9a3cd 279 SUPERFAMILY SSF53697 94 269 6.9E-30 T 09-03-2017 LS838_RS04850 062f6a6dada15e78093272f914a9a3cd 279 SUPERFAMILY SSF46689 6 76 1.68E-18 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS04850 062f6a6dada15e78093272f914a9a3cd 279 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 76 8.4E-20 T 09-03-2017 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 LS838_RS00695 b0703669c5a7c2ecfa54ce4e93478078 274 SUPERFAMILY SSF53448 1 249 4.31E-41 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS00695 b0703669c5a7c2ecfa54ce4e93478078 274 Gene3D G3DSA:3.90.550.10 1 270 9.8E-37 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS00695 b0703669c5a7c2ecfa54ce4e93478078 274 Pfam PF01501 Glycosyl transferase family 8 5 247 2.8E-14 T 09-03-2017 IPR002495 Glycosyl transferase, family 8 GO:0016757 LS838_RS08090 e41591b20e97866626424afbdac70f2a 337 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 10 324 6.7E-42 T 09-03-2017 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD LS838_RS08090 e41591b20e97866626424afbdac70f2a 337 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 11 325 2.8E-16 T 09-03-2017 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD LS838_RS02995 eda5dd5059688d6892668de1ae90a16b 147 Pfam PF03965 Penicillinase repressor 7 118 1.7E-31 T 09-03-2017 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 LS838_RS02995 eda5dd5059688d6892668de1ae90a16b 147 TIGRFAM TIGR02698 CopY_TcrY: copper transport repressor, CopY/TcrY family 7 135 1.6E-43 T 09-03-2017 IPR014071 Copper transport repressor CopY/TcrY LS838_RS02995 eda5dd5059688d6892668de1ae90a16b 147 SUPERFAMILY SSF46785 6 118 1.8E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS02995 eda5dd5059688d6892668de1ae90a16b 147 PIRSF PIRSF019455 1 132 5.6E-38 T 09-03-2017 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 LS838_RS02995 eda5dd5059688d6892668de1ae90a16b 147 Gene3D G3DSA:1.10.10.10 4 80 1.5E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS05275 d9f755890dcf4d4224ed306f9a3416f4 282 Pfam PF02016 LD-carboxypeptidase 5 275 1.3E-51 T 09-03-2017 IPR003507 Peptidase family S66 LS838_RS05275 d9f755890dcf4d4224ed306f9a3416f4 282 SUPERFAMILY SSF52317 5 146 1.33E-22 T 09-03-2017 IPR029062 Class I glutamine amidotransferase-like LS838_RS05275 d9f755890dcf4d4224ed306f9a3416f4 282 SUPERFAMILY SSF141986 148 277 7.19E-28 T 09-03-2017 IPR027461 LD-carboxypeptidase A, C-terminal domain LS838_RS05275 d9f755890dcf4d4224ed306f9a3416f4 282 Gene3D G3DSA:3.50.30.60 153 278 5.2E-29 T 09-03-2017 IPR027461 LD-carboxypeptidase A, C-terminal domain LS838_RS05275 d9f755890dcf4d4224ed306f9a3416f4 282 Gene3D G3DSA:3.40.50.10740 5 147 7.4E-23 T 09-03-2017 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain LS838_RS05275 d9f755890dcf4d4224ed306f9a3416f4 282 PIRSF PIRSF028757 1 280 2.1E-45 T 09-03-2017 IPR003507 Peptidase family S66 LS838_RS02090 774b32167a08b0ccca4efad95cc98ee7 244 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 55 231 1.4E-52 T 09-03-2017 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 LS838_RS02090 774b32167a08b0ccca4efad95cc98ee7 244 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 60 226 1.2E-54 T 09-03-2017 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 LS838_RS00865 80589f7e9a043728993abada76e846cd 232 SUPERFAMILY SSF52467 3 225 3.46E-62 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain LS838_RS00865 80589f7e9a043728993abada76e846cd 232 Pfam PF02146 Sir2 family 24 191 1.0E-41 T 09-03-2017 IPR003000 Sirtuin family GO:0070403 LS838_RS00865 80589f7e9a043728993abada76e846cd 232 Gene3D G3DSA:3.40.50.1220 167 221 7.3E-33 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain LS838_RS00865 80589f7e9a043728993abada76e846cd 232 Gene3D G3DSA:3.40.50.1220 3 34 7.3E-33 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain LS838_RS00865 80589f7e9a043728993abada76e846cd 232 Gene3D G3DSA:3.40.50.1220 85 120 7.3E-33 T 09-03-2017 IPR029035 DHS-like NAD/FAD-binding domain LS838_RS00865 80589f7e9a043728993abada76e846cd 232 Gene3D G3DSA:3.30.1600.10 35 74 5.2E-19 T 09-03-2017 IPR026591 Sirtuin family, catalytic core small domain LS838_RS00865 80589f7e9a043728993abada76e846cd 232 Gene3D G3DSA:3.30.1600.10 121 160 5.2E-19 T 09-03-2017 IPR026591 Sirtuin family, catalytic core small domain LS838_RS02575 ebc8d9b8569013a031d9ef890f9c6f7c 322 SUPERFAMILY SSF53474 53 320 2.19E-42 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS02575 ebc8d9b8569013a031d9ef890f9c6f7c 322 Gene3D G3DSA:3.40.50.1820 56 206 4.9E-44 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS02575 ebc8d9b8569013a031d9ef890f9c6f7c 322 Gene3D G3DSA:3.40.50.1820 250 320 4.9E-44 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS02575 ebc8d9b8569013a031d9ef890f9c6f7c 322 Pfam PF12146 Serine aminopeptidase, S33 97 196 1.5E-9 T 09-03-2017 IPR022742 Serine aminopeptidase, S33 LS838_RS00265 2068bf1b61edbddbfc1ce30f03153713 41 Pfam PF00232 Glycosyl hydrolase family 1 2 37 4.6E-6 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LS838_RS00265 2068bf1b61edbddbfc1ce30f03153713 41 SUPERFAMILY SSF51445 2 39 1.02E-9 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS00265 2068bf1b61edbddbfc1ce30f03153713 41 Gene3D G3DSA:3.20.20.80 2 40 7.1E-8 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS00275 2068bf1b61edbddbfc1ce30f03153713 41 Pfam PF00232 Glycosyl hydrolase family 1 2 37 4.6E-6 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LS838_RS00275 2068bf1b61edbddbfc1ce30f03153713 41 SUPERFAMILY SSF51445 2 39 1.02E-9 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS00275 2068bf1b61edbddbfc1ce30f03153713 41 Gene3D G3DSA:3.20.20.80 2 40 7.1E-8 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS06310 50d7ff863f230f987ccdf7e50f41694e 118 SUPERFAMILY SSF52833 1 117 1.34E-32 T 09-03-2017 IPR012336 Thioredoxin-like fold LS838_RS06310 50d7ff863f230f987ccdf7e50f41694e 118 Pfam PF03960 ArsC family 56 115 4.0E-14 T 09-03-2017 IPR006660 Arsenate reductase-like LS838_RS06310 50d7ff863f230f987ccdf7e50f41694e 118 Gene3D G3DSA:3.40.30.10 3 117 1.7E-38 T 09-03-2017 IPR012336 Thioredoxin-like fold LS838_RS06310 50d7ff863f230f987ccdf7e50f41694e 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 118 1.3E-30 T 09-03-2017 IPR006504 Transcriptional regulator Spx/MgsR LS838_RS06535 aedc486d82ea9c65476414e917357fb4 223 SUPERFAMILY SSF144091 5 187 7.19E-42 T 09-03-2017 LS838_RS06535 aedc486d82ea9c65476414e917357fb4 223 Gene3D G3DSA:1.20.1540.10 7 187 9.3E-43 T 09-03-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 LS838_RS06535 aedc486d82ea9c65476414e917357fb4 223 Pfam PF01694 Rhomboid family 50 188 1.3E-33 T 09-03-2017 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 LS838_RS01345 7316b7e44eda7404e58befb9cb4b2c18 141 SUPERFAMILY SSF49764 4 135 7.32E-33 T 09-03-2017 IPR008978 HSP20-like chaperone LS838_RS01345 7316b7e44eda7404e58befb9cb4b2c18 141 Gene3D G3DSA:2.60.40.790 4 141 4.4E-36 T 09-03-2017 IPR008978 HSP20-like chaperone LS838_RS01345 7316b7e44eda7404e58befb9cb4b2c18 141 Pfam PF00011 Hsp20/alpha crystallin family 39 140 1.1E-22 T 09-03-2017 IPR002068 Alpha crystallin/Hsp20 domain LS838_RS06485 ec19c1c35f73098ff969e470b2417fb6 159 SMART SM00530 6 61 3.0E-13 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LS838_RS06485 ec19c1c35f73098ff969e470b2417fb6 159 Pfam PF13127 Protein of unknown function (DUF3955) 91 144 5.6E-19 T 09-03-2017 IPR025016 Protein of unknown function DUF3955 LS838_RS06485 ec19c1c35f73098ff969e470b2417fb6 159 Gene3D G3DSA:1.10.260.40 1 63 3.0E-22 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS06485 ec19c1c35f73098ff969e470b2417fb6 159 Pfam PF01381 Helix-turn-helix 7 61 1.9E-13 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LS838_RS06485 ec19c1c35f73098ff969e470b2417fb6 159 SUPERFAMILY SSF47413 1 67 8.16E-17 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS05545 a0f1c95ac9d601cc174620fd86331f75 279 SUPERFAMILY SSF46689 225 273 5.82E-12 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS05545 a0f1c95ac9d601cc174620fd86331f75 279 Pfam PF12833 Helix-turn-helix domain 195 273 5.0E-21 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LS838_RS05545 a0f1c95ac9d601cc174620fd86331f75 279 Pfam PF02311 AraC-like ligand binding domain 17 151 6.5E-26 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LS838_RS05545 a0f1c95ac9d601cc174620fd86331f75 279 SMART SM00342 189 272 1.8E-28 T 09-03-2017 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 LS838_RS05545 a0f1c95ac9d601cc174620fd86331f75 279 Gene3D G3DSA:1.10.10.60 172 225 8.0E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS05545 a0f1c95ac9d601cc174620fd86331f75 279 SUPERFAMILY SSF46689 172 223 8.25E-7 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS05545 a0f1c95ac9d601cc174620fd86331f75 279 SUPERFAMILY SSF51215 10 156 9.29E-25 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LS838_RS05545 a0f1c95ac9d601cc174620fd86331f75 279 Gene3D G3DSA:2.60.120.280 8 157 7.4E-27 T 09-03-2017 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 LS838_RS05545 a0f1c95ac9d601cc174620fd86331f75 279 Gene3D G3DSA:1.10.10.60 226 273 6.6E-15 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS05515 8963592fe20621b77e9a9cb7fa38e0bc 278 Gene3D G3DSA:3.40.50.1820 40 278 2.6E-80 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS05515 8963592fe20621b77e9a9cb7fa38e0bc 278 Pfam PF06028 Alpha/beta hydrolase of unknown function (DUF915) 35 278 1.8E-70 T 09-03-2017 IPR010315 Protein of unknown function DUF915, hydrolase-like LS838_RS05515 8963592fe20621b77e9a9cb7fa38e0bc 278 SUPERFAMILY SSF53474 110 212 2.41E-10 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS05515 8963592fe20621b77e9a9cb7fa38e0bc 278 SUPERFAMILY SSF53474 45 78 2.41E-10 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS07325 6d43d56f08ed9d98013492444e070b10 163 Pfam PF04205 FMN-binding domain 84 157 2.3E-9 T 09-03-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 LS838_RS07325 6d43d56f08ed9d98013492444e070b10 163 SMART SM00900 82 160 9.4E-13 T 09-03-2017 IPR007329 FMN-binding GO:0010181|GO:0016020 LS838_RS04320 0c23d6720325bff2dc9bcff8cb876599 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 291 1.7E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS04320 0c23d6720325bff2dc9bcff8cb876599 302 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 15 296 2.9E-82 T 09-03-2017 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 LS838_RS04320 0c23d6720325bff2dc9bcff8cb876599 302 Gene3D G3DSA:1.10.3720.10 14 300 2.5E-35 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS04320 0c23d6720325bff2dc9bcff8cb876599 302 SUPERFAMILY SSF161098 13 295 1.57E-34 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS05690 1746f063cd024faf48ba24bebf3d807f 439 Gene3D G3DSA:3.50.50.60 330 368 5.0E-4 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS05690 1746f063cd024faf48ba24bebf3d807f 439 SUPERFAMILY SSF51905 3 367 5.18E-30 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS05690 1746f063cd024faf48ba24bebf3d807f 439 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 5 435 35.87 T 09-03-2017 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 LS838_RS05690 1746f063cd024faf48ba24bebf3d807f 439 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 3 433 1.1E-209 T 09-03-2017 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 LS838_RS05690 1746f063cd024faf48ba24bebf3d807f 439 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 337 360 - T 09-03-2017 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 LS838_RS05690 1746f063cd024faf48ba24bebf3d807f 439 Pfam PF01134 Glucose inhibited division protein A 4 368 7.5E-114 T 09-03-2017 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 LS838_RS05690 1746f063cd024faf48ba24bebf3d807f 439 Gene3D G3DSA:3.50.50.60 3 42 7.7E-11 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS05690 1746f063cd024faf48ba24bebf3d807f 439 Gene3D G3DSA:3.50.50.60 98 124 7.7E-11 T 09-03-2017 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 LS838_RS06870 904e478b87e69c22af7cbc2b7a60c219 167 Gene3D G3DSA:2.40.260.10 44 165 8.1E-17 T 09-03-2017 IPR023365 Sortase domain LS838_RS06870 904e478b87e69c22af7cbc2b7a60c219 167 Pfam PF04203 Sortase family 50 163 2.3E-16 T 09-03-2017 IPR005754 Sortase family LS838_RS06870 904e478b87e69c22af7cbc2b7a60c219 167 SUPERFAMILY SSF63817 43 164 9.81E-18 T 09-03-2017 IPR023365 Sortase domain LS838_RS01235 9a78874849f0514266c4bc258586b40c 353 Pfam PF01757 Acyltransferase family 8 341 2.3E-32 T 09-03-2017 IPR002656 Acyltransferase 3 GO:0016747 LS838_RS09025 7fce4d9e7251a1a5c111b8c11f7ad44c 379 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 101 249 2.1E-48 T 09-03-2017 IPR004474 Cell envelope-related transcriptional attenuator domain LS838_RS09025 7fce4d9e7251a1a5c111b8c11f7ad44c 379 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 102 248 2.5E-49 T 09-03-2017 IPR004474 Cell envelope-related transcriptional attenuator domain LS838_RS04780 bed5a2dd6ac5b322fe0019100863702b 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS04780 bed5a2dd6ac5b322fe0019100863702b 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS04780 bed5a2dd6ac5b322fe0019100863702b 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-8 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS04780 bed5a2dd6ac5b322fe0019100863702b 296 Pfam PF03466 LysR substrate binding domain 89 293 1.5E-28 T 09-03-2017 IPR005119 LysR, substrate-binding LS838_RS04780 bed5a2dd6ac5b322fe0019100863702b 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.6E-18 T 09-03-2017 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 LS838_RS04780 bed5a2dd6ac5b322fe0019100863702b 296 Gene3D G3DSA:1.10.10.10 1 83 9.0E-26 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS04780 bed5a2dd6ac5b322fe0019100863702b 296 Gene3D G3DSA:3.40.190.10 91 179 4.1E-14 T 09-03-2017 LS838_RS04780 bed5a2dd6ac5b322fe0019100863702b 296 SUPERFAMILY SSF53850 91 294 2.17E-28 T 09-03-2017 LS838_RS04780 bed5a2dd6ac5b322fe0019100863702b 296 SUPERFAMILY SSF46785 1 84 5.05E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS04780 bed5a2dd6ac5b322fe0019100863702b 296 Gene3D G3DSA:3.40.190.10 180 259 1.3E-12 T 09-03-2017 LS838_RS04485 510498409e89119c91c606f320ba1aab 1227 Gene3D G3DSA:1.10.486.10 614 755 1.9E-25 T 09-03-2017 LS838_RS04485 510498409e89119c91c606f320ba1aab 1227 Gene3D G3DSA:3.90.320.10 996 1209 1.4E-13 T 09-03-2017 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 LS838_RS04485 510498409e89119c91c606f320ba1aab 1227 Gene3D G3DSA:3.40.50.300 769 931 1.1E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04485 510498409e89119c91c606f320ba1aab 1227 Gene3D G3DSA:3.40.50.300 472 604 1.1E-56 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04485 510498409e89119c91c606f320ba1aab 1227 Gene3D G3DSA:3.40.50.300 354 460 9.6E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04485 510498409e89119c91c606f320ba1aab 1227 Gene3D G3DSA:3.40.50.300 4 69 9.6E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04485 510498409e89119c91c606f320ba1aab 1227 Gene3D G3DSA:3.40.50.300 101 163 9.6E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04485 510498409e89119c91c606f320ba1aab 1227 SUPERFAMILY SSF52980 1003 1210 3.91E-21 T 09-03-2017 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 LS838_RS04485 510498409e89119c91c606f320ba1aab 1227 Pfam PF13361 UvrD-like helicase C-terminal domain 468 874 4.1E-35 T 09-03-2017 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 LS838_RS04485 510498409e89119c91c606f320ba1aab 1227 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 457 1.2E-72 T 09-03-2017 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 LS838_RS04485 510498409e89119c91c606f320ba1aab 1227 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 2 1226 17.394 T 09-03-2017 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 LS838_RS04485 510498409e89119c91c606f320ba1aab 1227 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 4 1226 0.0 T 09-03-2017 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 LS838_RS04485 510498409e89119c91c606f320ba1aab 1227 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1050 1209 2.8E-7 T 09-03-2017 LS838_RS04485 510498409e89119c91c606f320ba1aab 1227 SUPERFAMILY SSF52540 3 169 3.92E-114 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04485 510498409e89119c91c606f320ba1aab 1227 SUPERFAMILY SSF52540 344 809 3.92E-114 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04485 510498409e89119c91c606f320ba1aab 1227 SUPERFAMILY SSF52540 852 877 3.92E-114 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06250 a73f953a7ed7abc0ad9439e50365fdd0 562 PIRSF PIRSF003128 1 561 2.5E-168 T 09-03-2017 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 LS838_RS06250 a73f953a7ed7abc0ad9439e50365fdd0 562 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 555 2.1E-159 T 09-03-2017 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 LS838_RS06250 a73f953a7ed7abc0ad9439e50365fdd0 562 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 512 4.7E-22 T 09-03-2017 IPR003395 RecF/RecN/SMC, N-terminal LS838_RS06250 a73f953a7ed7abc0ad9439e50365fdd0 562 Gene3D G3DSA:3.40.50.300 1 209 2.1E-60 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06250 a73f953a7ed7abc0ad9439e50365fdd0 562 SUPERFAMILY SSF52540 292 320 4.14E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06250 a73f953a7ed7abc0ad9439e50365fdd0 562 SUPERFAMILY SSF52540 1 204 4.14E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06250 a73f953a7ed7abc0ad9439e50365fdd0 562 SUPERFAMILY SSF52540 349 511 4.14E-63 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06250 a73f953a7ed7abc0ad9439e50365fdd0 562 Gene3D G3DSA:3.40.50.300 435 511 4.7E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06250 a73f953a7ed7abc0ad9439e50365fdd0 562 Gene3D G3DSA:3.40.50.300 386 390 4.7E-7 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00190 c79be609e0af10ea63530144f23116c8 281 Gene3D G3DSA:3.40.50.720 1 214 1.0E-34 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS00190 c79be609e0af10ea63530144f23116c8 281 Pfam PF13460 NAD(P)H-binding 8 148 9.9E-20 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS00190 c79be609e0af10ea63530144f23116c8 281 SUPERFAMILY SSF51735 6 247 4.32E-43 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS04160 929a719cd502da572cb49e827fe88818 318 Pfam PF01522 Polysaccharide deacetylase 78 217 1.4E-24 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 LS838_RS04160 929a719cd502da572cb49e827fe88818 318 Gene3D G3DSA:3.20.20.370 78 297 2.0E-49 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 LS838_RS04160 929a719cd502da572cb49e827fe88818 318 SUPERFAMILY SSF88713 77 295 2.18E-40 T 09-03-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LS838_RS06325 ce168324faf848481acfba130aae07b0 238 Gene3D G3DSA:3.40.50.300 2 234 3.3E-65 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06325 ce168324faf848481acfba130aae07b0 238 PIRSF PIRSF039137 1 238 1.7E-110 T 09-03-2017 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 LS838_RS06325 ce168324faf848481acfba130aae07b0 238 SMART SM00382 30 231 7.9E-8 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS06325 ce168324faf848481acfba130aae07b0 238 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS06325 ce168324faf848481acfba130aae07b0 238 SUPERFAMILY SSF52540 4 236 3.0E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06325 ce168324faf848481acfba130aae07b0 238 Pfam PF00005 ABC transporter 22 166 1.9E-33 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS03755 41060af83952c9405114b824db2f7a64 187 PIRSF PIRSF007510 1 185 4.6E-68 T 09-03-2017 IPR006340 Protein of unknown function DUF436 LS838_RS03755 41060af83952c9405114b824db2f7a64 187 Gene3D G3DSA:3.40.50.10360 4 184 1.2E-76 T 09-03-2017 IPR006340 Protein of unknown function DUF436 LS838_RS03755 41060af83952c9405114b824db2f7a64 187 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 11 184 2.0E-46 T 09-03-2017 IPR006340 Protein of unknown function DUF436 LS838_RS03755 41060af83952c9405114b824db2f7a64 187 Hamap MF_00800 UPF0340 protein . 1 187 81.721 T 09-03-2017 IPR006340 Protein of unknown function DUF436 LS838_RS03755 41060af83952c9405114b824db2f7a64 187 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 8 182 2.3E-58 T 09-03-2017 IPR006340 Protein of unknown function DUF436 LS838_RS03755 41060af83952c9405114b824db2f7a64 187 Pfam PF04260 Protein of unknown function (DUF436) 9 182 3.8E-72 T 09-03-2017 IPR006340 Protein of unknown function DUF436 LS838_RS03755 41060af83952c9405114b824db2f7a64 187 SUPERFAMILY SSF110710 4 184 3.92E-72 T 09-03-2017 LS838_RS03175 64ae426310687c83508ab296b0dda48f 200 SUPERFAMILY SSF52540 1 147 3.7E-37 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS03175 64ae426310687c83508ab296b0dda48f 200 Gene3D G3DSA:3.30.60.20 148 197 1.2E-19 T 09-03-2017 LS838_RS03175 64ae426310687c83508ab296b0dda48f 200 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 179 192 - T 09-03-2017 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 LS838_RS03175 64ae426310687c83508ab296b0dda48f 200 Pfam PF00265 Thymidine kinase 5 192 5.7E-44 T 09-03-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 LS838_RS03175 64ae426310687c83508ab296b0dda48f 200 Hamap MF_00124 Thymidine kinase [tdk]. 1 195 33.557 T 09-03-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 LS838_RS03175 64ae426310687c83508ab296b0dda48f 200 PIRSF PIRSF035805 1 200 4.4E-54 T 09-03-2017 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 LS838_RS03175 64ae426310687c83508ab296b0dda48f 200 SUPERFAMILY SSF57716 148 196 2.96E-16 T 09-03-2017 LS838_RS03175 64ae426310687c83508ab296b0dda48f 200 Gene3D G3DSA:3.40.50.300 8 114 2.2E-4 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06775 46879945b288b387b9e5e7c5b88f7ac9 218 Pfam PF02390 Putative methyltransferase 40 211 1.7E-46 T 09-03-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 LS838_RS06775 46879945b288b387b9e5e7c5b88f7ac9 218 SUPERFAMILY SSF53335 30 211 3.34E-25 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS06775 46879945b288b387b9e5e7c5b88f7ac9 218 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 29 212 4.3E-53 T 09-03-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 LS838_RS06775 46879945b288b387b9e5e7c5b88f7ac9 218 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 216 27.727 T 09-03-2017 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 LS838_RS06775 46879945b288b387b9e5e7c5b88f7ac9 218 Gene3D G3DSA:3.40.50.150 44 192 1.2E-8 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS00155 4452cb66a73cdbc4b034b083aefd934b 173 Pfam PF00583 Acetyltransferase (GNAT) family 58 150 2.7E-11 T 09-03-2017 IPR000182 GNAT domain GO:0008080 LS838_RS00155 4452cb66a73cdbc4b034b083aefd934b 173 Gene3D G3DSA:3.40.630.30 1 171 1.9E-53 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS00155 4452cb66a73cdbc4b034b083aefd934b 173 SUPERFAMILY SSF55729 1 166 1.95E-29 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS08475 045b9a2b8b5ee1ca2342a89c8981bf32 213 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 105 1.2E-27 T 09-03-2017 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 LS838_RS08475 045b9a2b8b5ee1ca2342a89c8981bf32 213 SUPERFAMILY SSF161098 10 198 3.79E-41 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS08475 045b9a2b8b5ee1ca2342a89c8981bf32 213 Gene3D G3DSA:1.10.3720.10 9 209 2.7E-45 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS08475 045b9a2b8b5ee1ca2342a89c8981bf32 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 203 6.6E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS03985 7fe0cf045c69a7a33bbb19abe285e857 186 SUPERFAMILY SSF110849 5 114 2.27E-29 T 09-03-2017 IPR003115 ParB/Sulfiredoxin LS838_RS03985 7fe0cf045c69a7a33bbb19abe285e857 186 SMART SM00470 6 91 1.9E-16 T 09-03-2017 IPR003115 ParB/Sulfiredoxin LS838_RS03985 7fe0cf045c69a7a33bbb19abe285e857 186 Gene3D G3DSA:3.90.1530.10 2 92 6.5E-21 T 09-03-2017 LS838_RS03985 7fe0cf045c69a7a33bbb19abe285e857 186 Pfam PF02195 ParB-like nuclease domain 9 90 1.4E-13 T 09-03-2017 IPR003115 ParB/Sulfiredoxin LS838_RS03350 9c12798b182ed3bbb4a1ca36534577af 109 Pfam PF11877 Protein of unknown function (DUF3397) 1 108 7.6E-23 T 09-03-2017 IPR024515 Protein of unknown function DUF3397 LS838_RS05735 30e1b7181339fd5689d7c9b268eaadf5 299 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 229 283 3.4E-21 T 09-03-2017 IPR019264 Domain of unknown function DUF2179 LS838_RS05735 30e1b7181339fd5689d7c9b268eaadf5 299 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 15 223 1.7E-58 T 09-03-2017 IPR003740 Uncharacterised membrane protein YitT LS838_RS05735 30e1b7181339fd5689d7c9b268eaadf5 299 PIRSF PIRSF006483 2 291 8.4E-78 T 09-03-2017 IPR003740 Uncharacterised membrane protein YitT LS838_RS03400 8b0edc4af00e9860e1149e4ae08b8119 450 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 15 174 3.5E-44 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 LS838_RS03400 8b0edc4af00e9860e1149e4ae08b8119 450 SMART SM00864 14 206 4.2E-113 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 LS838_RS03400 8b0edc4af00e9860e1149e4ae08b8119 450 ProSitePatterns PS01135 FtsZ protein signature 2. 98 119 - T 09-03-2017 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 LS838_RS03400 8b0edc4af00e9860e1149e4ae08b8119 450 SMART SM00865 208 325 9.8E-55 T 09-03-2017 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 LS838_RS03400 8b0edc4af00e9860e1149e4ae08b8119 450 SUPERFAMILY SSF52490 14 209 1.44E-69 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 LS838_RS03400 8b0edc4af00e9860e1149e4ae08b8119 450 Pfam PF12327 FtsZ family, C-terminal domain 223 317 9.0E-33 T 09-03-2017 IPR024757 Cell division protein FtsZ, C-terminal LS838_RS03400 8b0edc4af00e9860e1149e4ae08b8119 450 ProSitePatterns PS01134 FtsZ protein signature 1. 45 79 - T 09-03-2017 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 LS838_RS03400 8b0edc4af00e9860e1149e4ae08b8119 450 SUPERFAMILY SSF55307 208 320 1.72E-43 T 09-03-2017 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 LS838_RS03400 8b0edc4af00e9860e1149e4ae08b8119 450 Gene3D G3DSA:3.40.50.1440 15 215 1.3E-94 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 LS838_RS03400 8b0edc4af00e9860e1149e4ae08b8119 450 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 327 1.2E-131 T 09-03-2017 IPR000158 Cell division protein FtsZ GO:0005525 LS838_RS03400 8b0edc4af00e9860e1149e4ae08b8119 450 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 10 415 38.871 T 09-03-2017 IPR000158 Cell division protein FtsZ GO:0005525 LS838_RS03400 8b0edc4af00e9860e1149e4ae08b8119 450 PRINTS PR00423 Cell division protein FtsZ signature 190 212 6.5E-49 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 LS838_RS03400 8b0edc4af00e9860e1149e4ae08b8119 450 PRINTS PR00423 Cell division protein FtsZ signature 213 234 6.5E-49 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 LS838_RS03400 8b0edc4af00e9860e1149e4ae08b8119 450 PRINTS PR00423 Cell division protein FtsZ signature 127 148 6.5E-49 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 LS838_RS03400 8b0edc4af00e9860e1149e4ae08b8119 450 PRINTS PR00423 Cell division protein FtsZ signature 99 119 6.5E-49 T 09-03-2017 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 LS838_RS03400 8b0edc4af00e9860e1149e4ae08b8119 450 Gene3D G3DSA:3.30.1330.20 216 320 3.0E-48 T 09-03-2017 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 LS838_RS08915 daf8a8e54d1c91135a82990d7f5630ca 259 SUPERFAMILY SSF52540 51 230 1.82E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS08915 daf8a8e54d1c91135a82990d7f5630ca 259 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 53 230 1.8E-15 T 09-03-2017 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain LS838_RS08915 daf8a8e54d1c91135a82990d7f5630ca 259 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 32 240 1.4E-60 T 09-03-2017 IPR005702 Exopolysaccharide synthesis protein GO:0045226 LS838_RS08915 daf8a8e54d1c91135a82990d7f5630ca 259 Gene3D G3DSA:3.40.50.300 48 233 5.5E-38 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00760 d3357458de753cee52a8d663e5f43ce8 121 SUPERFAMILY SSF50475 21 110 1.08E-15 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 LS838_RS00760 d3357458de753cee52a8d663e5f43ce8 121 Gene3D G3DSA:2.30.110.10 2 120 7.8E-33 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 LS838_RS00760 d3357458de753cee52a8d663e5f43ce8 121 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 14 94 1.2E-11 T 09-03-2017 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 LS838_RS05945 a27375e71f2c762f0379fa875981eac2 243 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 6 237 38.71 T 09-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 LS838_RS05945 a27375e71f2c762f0379fa875981eac2 243 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 182 199 - T 09-03-2017 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 LS838_RS05945 a27375e71f2c762f0379fa875981eac2 243 SUPERFAMILY SSF64005 5 232 3.14E-84 T 09-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 LS838_RS05945 a27375e71f2c762f0379fa875981eac2 243 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 8 236 4.9E-82 T 09-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 LS838_RS05945 a27375e71f2c762f0379fa875981eac2 243 Gene3D G3DSA:3.40.1180.10 8 240 3.7E-96 T 09-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 LS838_RS05945 a27375e71f2c762f0379fa875981eac2 243 Pfam PF01255 Putative undecaprenyl diphosphate synthase 13 236 4.8E-82 T 09-03-2017 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 LS838_RS08630 0fd3b259bde31c17e2de12024ad300c4 326 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 95 241 9.2E-45 T 09-03-2017 IPR004474 Cell envelope-related transcriptional attenuator domain LS838_RS08630 0fd3b259bde31c17e2de12024ad300c4 326 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 94 241 9.3E-38 T 09-03-2017 IPR004474 Cell envelope-related transcriptional attenuator domain LS838_RS01055 75c702e6f6974e8c46246c857b101169 428 Pfam PF14501 GHKL domain 314 400 1.1E-9 T 09-03-2017 IPR032834 Sensor histidine kinase NatK, C-terminal domain LS838_RS01055 75c702e6f6974e8c46246c857b101169 428 Gene3D G3DSA:1.10.287.130 208 277 9.4E-4 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS01055 75c702e6f6974e8c46246c857b101169 428 SUPERFAMILY SSF55874 291 402 4.38E-6 T 09-03-2017 IPR003594 Histidine kinase-like ATPase, C-terminal domain LS838_RS02960 bdf858fd10d7e6310376956f171cb168 267 SUPERFAMILY SSF161098 4 251 1.09E-49 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS02960 bdf858fd10d7e6310376956f171cb168 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 258 1.9E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS02960 bdf858fd10d7e6310376956f171cb168 267 Gene3D G3DSA:1.10.3720.10 4 258 2.7E-56 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS00405 38cdebc1c1cbbe24e449a8cae0d934f9 191 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 5 178 2.8E-21 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain LS838_RS00405 38cdebc1c1cbbe24e449a8cae0d934f9 191 Gene3D G3DSA:3.40.50.1110 1 187 4.9E-39 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain LS838_RS00405 38cdebc1c1cbbe24e449a8cae0d934f9 191 SUPERFAMILY SSF52266 2 187 2.14E-35 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain LS838_RS08785 a0dfbafc5918d7fe6ca2967c2bf7d9fc 331 SUPERFAMILY SSF82549 10 331 3.66E-122 T 09-03-2017 LS838_RS08785 a0dfbafc5918d7fe6ca2967c2bf7d9fc 331 Gene3D G3DSA:3.30.1180.20 187 331 1.5E-52 T 09-03-2017 LS838_RS08785 a0dfbafc5918d7fe6ca2967c2bf7d9fc 331 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 331 3.9E-155 T 09-03-2017 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 LS838_RS08785 a0dfbafc5918d7fe6ca2967c2bf7d9fc 331 Gene3D G3DSA:3.40.50.10440 11 183 2.7E-73 T 09-03-2017 LS838_RS08785 a0dfbafc5918d7fe6ca2967c2bf7d9fc 331 Pfam PF02733 Dak1 domain 18 329 3.5E-120 T 09-03-2017 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 LS838_RS00140 24d32308bb365d11da3bf8d25ed15d29 255 Pfam PF03649 Uncharacterised protein family (UPF0014) 10 245 5.5E-78 T 09-03-2017 IPR005226 UPF0014 family LS838_RS00140 24d32308bb365d11da3bf8d25ed15d29 255 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 9 251 1.9E-80 T 09-03-2017 IPR005226 UPF0014 family LS838_RS05330 6ef7eecc5f2abe55764135fd67fa35cb 152 Pfam PF02082 Transcriptional regulator 1 81 1.1E-17 T 09-03-2017 IPR000944 Transcription regulator Rrf2-type LS838_RS05330 6ef7eecc5f2abe55764135fd67fa35cb 152 SUPERFAMILY SSF46785 5 133 1.84E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS05330 6ef7eecc5f2abe55764135fd67fa35cb 152 Gene3D G3DSA:1.10.10.10 1 140 2.6E-43 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS08840 95c41bb5e014ff1737baa331b0aa2bdd 115 Pfam PF05717 IS66 Orf2 like protein 9 103 1.7E-34 T 09-03-2017 IPR008878 Transposase IS66, Orf2 LS838_RS00230 53b2c67a9dfae3e86a0045754b55f27d 583 SUPERFAMILY SSF53098 259 336 7.59E-7 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS00230 53b2c67a9dfae3e86a0045754b55f27d 583 SUPERFAMILY SSF53098 379 494 7.59E-7 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS00230 53b2c67a9dfae3e86a0045754b55f27d 583 Pfam PF01609 Transposase DDE domain 214 482 5.5E-10 T 09-03-2017 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 LS838_RS07195 faffe42f305001de0a3282ae349ededd 249 Gene3D G3DSA:3.10.129.10 144 242 5.8E-23 T 09-03-2017 IPR029069 HotDog domain LS838_RS07195 faffe42f305001de0a3282ae349ededd 249 SUPERFAMILY SSF54637 147 241 5.8E-21 T 09-03-2017 IPR029069 HotDog domain LS838_RS07195 faffe42f305001de0a3282ae349ededd 249 SUPERFAMILY SSF54637 3 143 2.72E-31 T 09-03-2017 IPR029069 HotDog domain LS838_RS07195 faffe42f305001de0a3282ae349ededd 249 Pfam PF01643 Acyl-ACP thioesterase 3 243 1.2E-50 T 09-03-2017 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 LS838_RS07195 faffe42f305001de0a3282ae349ededd 249 Gene3D G3DSA:3.10.129.10 3 142 4.5E-28 T 09-03-2017 IPR029069 HotDog domain LS838_RS06770 093f60f8612a4240ab3dbe2972877d06 106 Gene3D G3DSA:3.40.30.10 3 104 5.2E-22 T 09-03-2017 IPR012336 Thioredoxin-like fold LS838_RS06770 093f60f8612a4240ab3dbe2972877d06 106 SUPERFAMILY SSF52833 6 104 1.24E-24 T 09-03-2017 IPR012336 Thioredoxin-like fold LS838_RS06770 093f60f8612a4240ab3dbe2972877d06 106 Pfam PF00085 Thioredoxin 15 102 4.8E-18 T 09-03-2017 IPR013766 Thioredoxin domain GO:0045454 LS838_RS00050 544c6fa35d65a3fe0065e76f4ecb97f6 673 Gene3D G3DSA:3.90.1640.10 352 552 2.5E-40 T 09-03-2017 LS838_RS00050 544c6fa35d65a3fe0065e76f4ecb97f6 673 Pfam PF02272 DHHA1 domain 607 661 2.4E-7 T 09-03-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 LS838_RS00050 544c6fa35d65a3fe0065e76f4ecb97f6 673 PIRSF PIRSF026583 10 673 7.0E-242 T 09-03-2017 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA LS838_RS00050 544c6fa35d65a3fe0065e76f4ecb97f6 673 SUPERFAMILY SSF64182 352 661 1.31E-65 T 09-03-2017 LS838_RS00050 544c6fa35d65a3fe0065e76f4ecb97f6 673 Pfam PF01368 DHH family 354 514 1.0E-18 T 09-03-2017 IPR001667 DDH domain LS838_RS07900 782e095a95d37f385b4ed00c39663660 600 SMART SM00642 134 510 2.4E-80 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LS838_RS07900 782e095a95d37f385b4ed00c39663660 600 Gene3D G3DSA:3.20.20.80 124 511 2.4E-96 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS07900 782e095a95d37f385b4ed00c39663660 600 Pfam PF00128 Alpha amylase, catalytic domain 184 484 2.7E-61 T 09-03-2017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 LS838_RS07900 782e095a95d37f385b4ed00c39663660 600 SUPERFAMILY SSF51445 111 519 1.61E-90 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS03805 acea7a1a68ed1a6a90c4e9a06570060d 159 Pfam PF01757 Acyltransferase family 8 138 1.3E-9 T 09-03-2017 IPR002656 Acyltransferase 3 GO:0016747 LS838_RS08380 e774b5f1703ab5d5be5f2b71d0a39bb6 173 SUPERFAMILY SSF55729 1 161 9.66E-32 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS08380 e774b5f1703ab5d5be5f2b71d0a39bb6 173 Gene3D G3DSA:3.40.630.30 4 162 6.0E-38 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS08380 e774b5f1703ab5d5be5f2b71d0a39bb6 173 Pfam PF13673 Acetyltransferase (GNAT) domain 31 151 1.5E-13 T 09-03-2017 IPR000182 GNAT domain GO:0008080 LS838_RS05155 1eb4c8271ce21e7f80f7b2c7a584ffe0 97 Pfam PF15723 Motility quorum-sensing regulator, toxin of MqsA 6 93 2.0E-9 T 09-03-2017 IPR031451 mRNA interferase MqsR GO:0009372|GO:0017148|GO:0042710 LS838_RS06270 b25e3aea00237a36949614a5f1d50f43 456 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 9 448 28.521 T 09-03-2017 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 LS838_RS06270 b25e3aea00237a36949614a5f1d50f43 456 Pfam PF13742 OB-fold nucleic acid binding domain 12 107 4.6E-28 T 09-03-2017 IPR025824 OB-fold nucleic acid binding domain GO:0003676 LS838_RS06270 b25e3aea00237a36949614a5f1d50f43 456 Pfam PF02601 Exonuclease VII, large subunit 130 443 1.2E-99 T 09-03-2017 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 LS838_RS06270 b25e3aea00237a36949614a5f1d50f43 456 Gene3D G3DSA:2.40.50.140 51 108 3.0E-4 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS06270 b25e3aea00237a36949614a5f1d50f43 456 Gene3D G3DSA:2.40.50.140 404 451 3.9E-4 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS06270 b25e3aea00237a36949614a5f1d50f43 456 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 13 360 4.4E-132 T 09-03-2017 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 LS838_RS09285 9451338e849720247fc058959b42a8c5 472 PIRSF PIRSF002457 3 472 1.1E-127 T 09-03-2017 IPR030676 Citrate carrier CitT-related LS838_RS09285 9451338e849720247fc058959b42a8c5 472 Pfam PF00939 Sodium:sulfate symporter transmembrane region 15 472 1.2E-121 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 LS838_RS09285 9451338e849720247fc058959b42a8c5 472 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 32 465 1.7E-112 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 LS838_RS06480 89173b5ab9041dd9b561de7bfe7383b3 371 SUPERFAMILY SSF51726 11 370 1.83E-80 T 09-03-2017 LS838_RS06480 89173b5ab9041dd9b561de7bfe7383b3 371 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 162 348 5.2E-7 T 09-03-2017 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 LS838_RS06480 89173b5ab9041dd9b561de7bfe7383b3 371 Gene3D G3DSA:3.20.20.210 6 371 2.6E-111 T 09-03-2017 LS838_RS09785 82a889fbf3997a1ed40b45102847b9eb 83 Gene3D G3DSA:1.25.10.10 16 82 1.0E-7 T 09-03-2017 IPR011989 Armadillo-like helical LS838_RS09785 82a889fbf3997a1ed40b45102847b9eb 83 SUPERFAMILY SSF48371 15 82 6.33E-9 T 09-03-2017 IPR016024 Armadillo-type fold GO:0005488 LS838_RS02335 ce485ee04d65427f90355b4976166c76 399 Gene3D G3DSA:1.20.1250.20 8 193 4.6E-37 T 09-03-2017 LS838_RS02335 ce485ee04d65427f90355b4976166c76 399 Gene3D G3DSA:1.20.1250.20 217 390 1.7E-27 T 09-03-2017 LS838_RS02335 ce485ee04d65427f90355b4976166c76 399 SUPERFAMILY SSF103473 5 390 1.28E-69 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS02335 ce485ee04d65427f90355b4976166c76 399 Pfam PF07690 Major Facilitator Superfamily 17 307 2.4E-41 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LS838_RS02335 ce485ee04d65427f90355b4976166c76 399 PRINTS PR01035 Tetracycline resistance protein signature 82 106 2.0E-7 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LS838_RS02335 ce485ee04d65427f90355b4976166c76 399 PRINTS PR01035 Tetracycline resistance protein signature 139 161 2.0E-7 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LS838_RS02335 ce485ee04d65427f90355b4976166c76 399 PRINTS PR01035 Tetracycline resistance protein signature 283 304 2.0E-7 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LS838_RS02335 ce485ee04d65427f90355b4976166c76 399 PRINTS PR01035 Tetracycline resistance protein signature 51 70 2.0E-7 T 09-03-2017 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 LS838_RS05850 df8653f9af25216f85cc75a3cf6c78aa 758 Pfam PF02272 DHHA1 domain 365 431 7.7E-7 T 09-03-2017 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 LS838_RS05850 df8653f9af25216f85cc75a3cf6c78aa 758 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 557 742 4.1E-33 T 09-03-2017 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal LS838_RS05850 df8653f9af25216f85cc75a3cf6c78aa 758 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 22 543 1.4E-147 T 09-03-2017 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 LS838_RS05850 df8653f9af25216f85cc75a3cf6c78aa 758 Pfam PF01368 DHH family 76 220 2.4E-12 T 09-03-2017 IPR001667 DDH domain LS838_RS05850 df8653f9af25216f85cc75a3cf6c78aa 758 SUPERFAMILY SSF64182 51 434 2.75E-111 T 09-03-2017 LS838_RS04890 43b85378d2f27158980768554c241919 147 Pfam PF08551 Eukaryotic integral membrane protein (DUF1751) 12 98 7.5E-5 T 09-03-2017 IPR013861 Transmembrane protein DUF1751, eukaryotic GO:0006890|GO:0016021 Reactome: R-HSA-6807878 LS838_RS01480 41bfd36e00da0dda1172934dbca6bcab 426 Pfam PF01385 Probable transposase 200 287 5.5E-12 T 09-03-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 LS838_RS01480 41bfd36e00da0dda1172934dbca6bcab 426 Pfam PF07282 Putative transposase DNA-binding domain 321 388 5.7E-19 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS01480 41bfd36e00da0dda1172934dbca6bcab 426 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 268 348 7.0E-15 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS05020 b40fbf192a6b3c1dd0e5ccab3b19eab2 354 Pfam PF09664 Protein of unknown function C-terminus (DUF2399) 223 351 2.5E-21 T 09-03-2017 IPR024465 Domain of unknown function DUF2399 LS838_RS05020 b40fbf192a6b3c1dd0e5ccab3b19eab2 354 Pfam PF11796 Protein of unknown function N-terminus (DUF3323) 129 201 3.3E-8 T 09-03-2017 IPR024466 Conserved hypothetical protein CHP02679, N terminus LS838_RS02730 8ea018a6cd537f1e103cdcfb743a8275 417 Gene3D G3DSA:3.30.830.10 3 201 4.2E-36 T 09-03-2017 IPR011237 Peptidase M16 domain GO:0046872 LS838_RS02730 8ea018a6cd537f1e103cdcfb743a8275 417 SUPERFAMILY SSF63411 4 201 1.54E-37 T 09-03-2017 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 LS838_RS02730 8ea018a6cd537f1e103cdcfb743a8275 417 Pfam PF05193 Peptidase M16 inactive domain 163 326 2.1E-6 T 09-03-2017 IPR007863 Peptidase M16, C-terminal LS838_RS02730 8ea018a6cd537f1e103cdcfb743a8275 417 Pfam PF00675 Insulinase (Peptidase family M16) 30 156 6.7E-18 T 09-03-2017 IPR011765 Peptidase M16, N-terminal LS838_RS05140 cc39d5ae0e577182a744ca068aa11620 136 Gene3D G3DSA:3.40.190.10 12 40 3.2E-6 T 09-03-2017 LS838_RS05140 cc39d5ae0e577182a744ca068aa11620 136 Pfam PF03466 LysR substrate binding domain 4 135 3.1E-6 T 09-03-2017 IPR005119 LysR, substrate-binding LS838_RS05140 cc39d5ae0e577182a744ca068aa11620 136 SUPERFAMILY SSF53850 3 133 1.77E-5 T 09-03-2017 LS838_RS02500 7587d9e7eded2a31cd4b24d93ffdfd5a 357 PRINTS PR01692 Lipocalin-1 interacting membrane receptor signature 14 36 8.6E-5 T 09-03-2017 IPR008075 Lipocalin-1 receptor LS838_RS02500 7587d9e7eded2a31cd4b24d93ffdfd5a 357 PRINTS PR01692 Lipocalin-1 interacting membrane receptor signature 267 288 8.6E-5 T 09-03-2017 IPR008075 Lipocalin-1 receptor LS838_RS02500 7587d9e7eded2a31cd4b24d93ffdfd5a 357 PRINTS PR01692 Lipocalin-1 interacting membrane receptor signature 320 340 8.6E-5 T 09-03-2017 IPR008075 Lipocalin-1 receptor LS838_RS02500 7587d9e7eded2a31cd4b24d93ffdfd5a 357 Pfam PF13303 Phosphotransferase system, EIIC 16 352 9.0E-83 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LS838_RS00310 8ff288f1440c93252b237497c8bc81b2 479 Pfam PF05031 Iron Transport-associated domain 210 320 6.6E-10 T 09-03-2017 IPR006635 NEAT domain LS838_RS00310 8ff288f1440c93252b237497c8bc81b2 479 SUPERFAMILY SSF158911 210 312 5.49E-11 T 09-03-2017 LS838_RS01880 f9317305df92b9bd9e8c56ff13157988 88 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 86 23.247 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01880 f9317305df92b9bd9e8c56ff13157988 88 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 10 81 4.0E-25 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01880 f9317305df92b9bd9e8c56ff13157988 88 PRINTS PR00973 Ribosomal protein S17 family signature 61 71 7.5E-9 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01880 f9317305df92b9bd9e8c56ff13157988 88 PRINTS PR00973 Ribosomal protein S17 family signature 29 52 7.5E-9 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01880 f9317305df92b9bd9e8c56ff13157988 88 PRINTS PR00973 Ribosomal protein S17 family signature 71 78 7.5E-9 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01880 f9317305df92b9bd9e8c56ff13157988 88 Gene3D G3DSA:2.40.50.140 9 86 4.6E-32 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS01880 f9317305df92b9bd9e8c56ff13157988 88 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 11 81 1.2E-32 T 09-03-2017 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01880 f9317305df92b9bd9e8c56ff13157988 88 ProSitePatterns PS00056 Ribosomal protein S17 signature. 61 73 - T 09-03-2017 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01880 f9317305df92b9bd9e8c56ff13157988 88 Pfam PF00366 Ribosomal protein S17 15 81 2.5E-30 T 09-03-2017 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 LS838_RS01880 f9317305df92b9bd9e8c56ff13157988 88 SUPERFAMILY SSF50249 9 86 4.71E-30 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS08265 681be5efbfb4a179fd60a5dcab1fc4f8 524 Gene3D G3DSA:3.20.20.140 195 462 1.0E-30 T 09-03-2017 LS838_RS08265 681be5efbfb4a179fd60a5dcab1fc4f8 524 Pfam PF07969 Amidohydrolase family 41 518 1.2E-75 T 09-03-2017 IPR013108 Amidohydrolase 3 LS838_RS08265 681be5efbfb4a179fd60a5dcab1fc4f8 524 SUPERFAMILY SSF51556 52 112 1.47E-23 T 09-03-2017 IPR032466 Metal-dependent hydrolase LS838_RS08265 681be5efbfb4a179fd60a5dcab1fc4f8 524 SUPERFAMILY SSF51556 189 473 1.47E-23 T 09-03-2017 IPR032466 Metal-dependent hydrolase LS838_RS08265 681be5efbfb4a179fd60a5dcab1fc4f8 524 Gene3D G3DSA:2.30.40.10 6 75 5.3E-15 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LS838_RS08265 681be5efbfb4a179fd60a5dcab1fc4f8 524 Gene3D G3DSA:2.30.40.10 463 522 1.6E-6 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LS838_RS08265 681be5efbfb4a179fd60a5dcab1fc4f8 524 SUPERFAMILY SSF51338 6 53 3.89E-20 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LS838_RS08265 681be5efbfb4a179fd60a5dcab1fc4f8 524 SUPERFAMILY SSF51338 478 520 3.89E-20 T 09-03-2017 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 LS838_RS04600 38e5fa3cf39f9123bd393e10ea14982c 93 Hamap MF_01054 UPF0237 protein . 1 88 25.686 T 09-03-2017 IPR022986 Uncharacterised protein family UPF0237, ACT-type LS838_RS04600 38e5fa3cf39f9123bd393e10ea14982c 93 Gene3D G3DSA:3.30.70.260 2 87 7.8E-31 T 09-03-2017 LS838_RS04600 38e5fa3cf39f9123bd393e10ea14982c 93 Pfam PF13740 ACT domain 4 75 8.3E-15 T 09-03-2017 LS838_RS04600 38e5fa3cf39f9123bd393e10ea14982c 93 SUPERFAMILY SSF55021 1 80 1.91E-22 T 09-03-2017 LS838_RS08690 1307e125c3dd696856d6ad24b01708bc 144 Pfam PF01610 Transposase 46 135 1.3E-10 T 09-03-2017 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain LS838_RS04175 193f69bf4b4ea1e52c78ba7336459555 256 Pfam PF01226 Formate/nitrite transporter 6 250 7.9E-64 T 09-03-2017 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 LS838_RS04175 193f69bf4b4ea1e52c78ba7336459555 256 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 157 167 - T 09-03-2017 IPR024002 Formate/nitrite transporter, conserved site LS838_RS04175 193f69bf4b4ea1e52c78ba7336459555 256 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 74 83 - T 09-03-2017 IPR024002 Formate/nitrite transporter, conserved site LS838_RS04175 193f69bf4b4ea1e52c78ba7336459555 256 Gene3D G3DSA:1.20.1080.10 23 254 3.3E-64 T 09-03-2017 IPR023271 Aquaporin-like Reactome: R-HSA-432047 LS838_RS03040 65dbe6af9de2d6b2d9a82ca648fa50e9 218 Gene3D G3DSA:3.40.50.720 1 209 7.9E-20 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS03040 65dbe6af9de2d6b2d9a82ca648fa50e9 218 SUPERFAMILY SSF51735 1 200 6.72E-15 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS03040 65dbe6af9de2d6b2d9a82ca648fa50e9 218 Pfam PF13460 NAD(P)H-binding 10 195 2.0E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS09150 67a4c6eb78cfc79f8267771750642408 174 Pfam PF02674 Colicin V production protein 5 154 2.0E-18 T 09-03-2017 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 LS838_RS06620 1bad4c55274651b278036518eacaeb15 197 Gene3D G3DSA:1.10.3210.10 12 195 3.9E-60 T 09-03-2017 IPR006674 HD domain LS838_RS06620 1bad4c55274651b278036518eacaeb15 197 Pfam PF01966 HD domain 30 142 4.6E-10 T 09-03-2017 IPR006674 HD domain LS838_RS06620 1bad4c55274651b278036518eacaeb15 197 SMART SM00471 26 153 2.1E-10 T 09-03-2017 IPR003607 HD/PDEase domain LS838_RS06620 1bad4c55274651b278036518eacaeb15 197 SUPERFAMILY SSF109604 18 196 8.11E-31 T 09-03-2017 LS838_RS06620 1bad4c55274651b278036518eacaeb15 197 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 23 192 6.9E-46 T 09-03-2017 IPR005249 Conserved hypothetical protein CHP00488 LS838_RS06045 9234e8c273dbe4de934fd95d48697f80 440 SUPERFAMILY SSF52540 196 261 6.38E-6 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06045 9234e8c273dbe4de934fd95d48697f80 440 SUPERFAMILY SSF52540 33 116 6.38E-6 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06045 9234e8c273dbe4de934fd95d48697f80 440 Pfam PF10923 P-loop Domain of unknown function (DUF2791) 7 415 7.5E-172 T 09-03-2017 IPR021228 Protein of unknown function DUF2791 LS838_RS06045 9234e8c273dbe4de934fd95d48697f80 440 Gene3D G3DSA:3.40.50.300 34 128 4.6E-6 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06045 9234e8c273dbe4de934fd95d48697f80 440 Gene3D G3DSA:3.40.50.300 211 303 4.6E-6 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06785 8fa334e286b07e3d0b9773faa20ef03e 246 SMART SM00382 27 212 2.3E-9 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS06785 8fa334e286b07e3d0b9773faa20ef03e 246 Gene3D G3DSA:3.40.50.300 2 227 2.6E-57 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06785 8fa334e286b07e3d0b9773faa20ef03e 246 Pfam PF00005 ABC transporter 19 161 3.8E-29 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS06785 8fa334e286b07e3d0b9773faa20ef03e 246 SUPERFAMILY SSF52540 3 225 9.24E-55 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06785 8fa334e286b07e3d0b9773faa20ef03e 246 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS07095 f7107fbe0f870a187ac0cad0e09c0b5f 142 SUPERFAMILY SSF53098 1 139 4.4E-39 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS07095 f7107fbe0f870a187ac0cad0e09c0b5f 142 SMART SM00732 1 103 5.5E-37 T 09-03-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 LS838_RS07095 f7107fbe0f870a187ac0cad0e09c0b5f 142 Gene3D G3DSA:3.30.420.140 1 140 2.1E-47 T 09-03-2017 IPR006641 YqgF/RNase H-like domain GO:0006139 LS838_RS07095 f7107fbe0f870a187ac0cad0e09c0b5f 142 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 137 6.8E-40 T 09-03-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 LS838_RS07095 f7107fbe0f870a187ac0cad0e09c0b5f 142 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 140 26.156 T 09-03-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 LS838_RS07095 f7107fbe0f870a187ac0cad0e09c0b5f 142 Pfam PF03652 Holliday junction resolvase 1 137 1.4E-41 T 09-03-2017 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 LS838_RS04695 c3e8c02467a403363e2151384a03456b 470 Pfam PF07282 Putative transposase DNA-binding domain 374 439 5.7E-18 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS04695 c3e8c02467a403363e2151384a03456b 470 Pfam PF01385 Probable transposase 275 351 6.4E-7 T 09-03-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 LS838_RS07670 74e5fa09d06e80b48c8821809ec8f8dd 315 SUPERFAMILY SSF53448 3 264 1.86E-58 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS07670 74e5fa09d06e80b48c8821809ec8f8dd 315 Gene3D G3DSA:3.90.550.10 4 267 6.0E-62 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS07670 74e5fa09d06e80b48c8821809ec8f8dd 315 Pfam PF01501 Glycosyl transferase family 8 5 245 1.2E-43 T 09-03-2017 IPR002495 Glycosyl transferase, family 8 GO:0016757 LS838_RS06050 7d41d26cb79e9210e409515caa8ec450 632 SUPERFAMILY SSF142906 1 104 1.83E-7 T 09-03-2017 LS838_RS06050 7d41d26cb79e9210e409515caa8ec450 632 Pfam PF13208 TerB N-terminal domain 161 368 1.1E-22 T 09-03-2017 IPR025266 TerB, N-terminal LS838_RS06050 7d41d26cb79e9210e409515caa8ec450 632 Pfam PF15615 TerB-C domain 475 623 1.6E-29 T 09-03-2017 IPR028932 TerB-C domain LS838_RS09715 b0f96b410b94b568d9fcefd0252c9fe7 361 SUPERFAMILY SSF53822 52 271 1.08E-12 T 09-03-2017 IPR028082 Periplasmic binding protein-like I LS838_RS09715 b0f96b410b94b568d9fcefd0252c9fe7 361 Gene3D G3DSA:3.40.50.2300 37 164 2.1E-46 T 09-03-2017 LS838_RS09715 b0f96b410b94b568d9fcefd0252c9fe7 361 Pfam PF02608 Basic membrane protein 46 349 1.6E-63 T 09-03-2017 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 LS838_RS09715 b0f96b410b94b568d9fcefd0252c9fe7 361 Gene3D G3DSA:3.40.50.2300 165 328 9.1E-47 T 09-03-2017 LS838_RS05075 8c087ecf01cc195bdb5e009c164875fe 429 Pfam PF01554 MatE 2 160 2.5E-23 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 LS838_RS05075 8c087ecf01cc195bdb5e009c164875fe 429 Pfam PF01554 MatE 223 379 5.3E-9 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 LS838_RS05075 8c087ecf01cc195bdb5e009c164875fe 429 PIRSF PIRSF006603 1 409 1.4E-53 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 LS838_RS05075 8c087ecf01cc195bdb5e009c164875fe 429 TIGRFAM TIGR00797 matE: MATE efflux family protein 2 397 5.7E-44 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 LS838_RS05970 7044b35c296e856bf7eda04768840546 336 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 120 126 - T 09-03-2017 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 LS838_RS05970 7044b35c296e856bf7eda04768840546 336 SUPERFAMILY SSF82771 253 325 7.85E-13 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily LS838_RS05970 7044b35c296e856bf7eda04768840546 336 SUPERFAMILY SSF53335 10 198 4.33E-26 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS05970 7044b35c296e856bf7eda04768840546 336 Pfam PF05175 Methyltransferase small domain 35 174 2.1E-7 T 09-03-2017 IPR007848 Methyltransferase small domain GO:0008168 LS838_RS05970 7044b35c296e856bf7eda04768840546 336 Pfam PF01541 GIY-YIG catalytic domain 253 324 3.1E-16 T 09-03-2017 IPR000305 GIY-YIG nuclease superfamily LS838_RS05970 7044b35c296e856bf7eda04768840546 336 Gene3D G3DSA:3.40.50.150 32 246 1.2E-58 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS09055 299663ec610b2446d097b484a780bbcb 217 Pfam PF00005 ABC transporter 21 154 9.5E-26 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS09055 299663ec610b2446d097b484a780bbcb 217 SUPERFAMILY SSF52540 4 212 3.64E-49 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09055 299663ec610b2446d097b484a780bbcb 217 Gene3D G3DSA:3.40.50.300 3 214 1.4E-53 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09055 299663ec610b2446d097b484a780bbcb 217 SMART SM00382 29 203 8.8E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS09835 1f898b23b49e6204dad88afa7b733329 215 Pfam PF01712 Deoxynucleoside kinase 5 208 1.1E-61 T 09-03-2017 IPR031314 Deoxynucleoside kinase domain LS838_RS09835 1f898b23b49e6204dad88afa7b733329 215 SUPERFAMILY SSF52540 3 209 2.21E-40 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09835 1f898b23b49e6204dad88afa7b733329 215 PIRSF PIRSF000705 2 214 5.1E-54 T 09-03-2017 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 LS838_RS09835 1f898b23b49e6204dad88afa7b733329 215 Gene3D G3DSA:3.40.50.300 4 207 2.0E-54 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07450 c72581628b0d188fa92c346694b4f399 249 SUPERFAMILY SSF55315 4 81 5.3E-17 T 09-03-2017 IPR029064 50S ribosomal protein L30e-like LS838_RS07450 c72581628b0d188fa92c346694b4f399 249 Gene3D G3DSA:3.40.1280.10 95 246 3.4E-51 T 09-03-2017 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal LS838_RS07450 c72581628b0d188fa92c346694b4f399 249 SMART SM00967 8 85 2.3E-17 T 09-03-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 LS838_RS07450 c72581628b0d188fa92c346694b4f399 249 Gene3D G3DSA:3.30.1330.30 3 80 8.7E-20 T 09-03-2017 IPR029064 50S ribosomal protein L30e-like LS838_RS07450 c72581628b0d188fa92c346694b4f399 249 Pfam PF00588 SpoU rRNA Methylase family 101 240 5.4E-41 T 09-03-2017 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 LS838_RS07450 c72581628b0d188fa92c346694b4f399 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 8 84 4.1E-17 T 09-03-2017 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 LS838_RS07450 c72581628b0d188fa92c346694b4f399 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 7 245 4.7E-75 T 09-03-2017 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 LS838_RS07450 c72581628b0d188fa92c346694b4f399 249 SUPERFAMILY SSF75217 81 246 1.11E-47 T 09-03-2017 IPR029028 Alpha/beta knot methyltransferases LS838_RS04910 e6f50f4216137adc5ce6a468ec5ffb4b 125 SUPERFAMILY SSF53098 10 108 4.43E-17 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS04910 e6f50f4216137adc5ce6a468ec5ffb4b 125 Pfam PF00075 RNase H 15 96 9.7E-10 T 09-03-2017 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 LS838_RS04910 e6f50f4216137adc5ce6a468ec5ffb4b 125 Gene3D G3DSA:3.30.420.10 11 109 1.3E-21 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS05025 cf737ce38cc5faae332862cd7964d46d 171 SUPERFAMILY SSF51735 1 161 5.93E-15 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS05025 cf737ce38cc5faae332862cd7964d46d 171 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 109 2.0E-5 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LS838_RS05025 cf737ce38cc5faae332862cd7964d46d 171 Gene3D G3DSA:3.40.50.720 2 159 3.5E-11 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS09035 1a3863b719f390f93a2be813239dd7a8 600 Pfam PF01432 Peptidase family M3 203 584 1.7E-65 T 09-03-2017 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 LS838_RS09035 1a3863b719f390f93a2be813239dd7a8 600 Gene3D G3DSA:1.10.287.830 181 226 1.7E-16 T 09-03-2017 LS838_RS09035 1a3863b719f390f93a2be813239dd7a8 600 Pfam PF08439 Oligopeptidase F 115 182 1.5E-20 T 09-03-2017 IPR013647 Oligopeptidase F, N-terminal domain LS838_RS09035 1a3863b719f390f93a2be813239dd7a8 600 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 6 594 9.5E-176 T 09-03-2017 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 LS838_RS09035 1a3863b719f390f93a2be813239dd7a8 600 Gene3D G3DSA:3.40.390.10 381 425 6.8E-5 T 09-03-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 LS838_RS09035 1a3863b719f390f93a2be813239dd7a8 600 SUPERFAMILY SSF55486 56 599 4.86E-122 T 09-03-2017 LS838_RS08010 3f3732025f52a701bbc67fec907871e6 333 SUPERFAMILY SSF53062 1 130 4.58E-35 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LS838_RS08010 3f3732025f52a701bbc67fec907871e6 333 SUPERFAMILY SSF52728 167 325 2.22E-49 T 09-03-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LS838_RS08010 3f3732025f52a701bbc67fec907871e6 333 Pfam PF03610 PTS system fructose IIA component 3 115 1.4E-31 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LS838_RS08010 3f3732025f52a701bbc67fec907871e6 333 Gene3D G3DSA:3.40.50.510 1 140 1.2E-46 T 09-03-2017 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 LS838_RS08010 3f3732025f52a701bbc67fec907871e6 333 Pfam PF03830 PTS system sorbose subfamily IIB component 168 314 1.6E-45 T 09-03-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LS838_RS08010 3f3732025f52a701bbc67fec907871e6 333 Gene3D G3DSA:3.40.35.10 167 326 7.3E-58 T 09-03-2017 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 LS838_RS08560 4eb9c6fd7682a94d3c14ee62221dfebd 270 Gene3D G3DSA:2.10.270.10 5 109 4.3E-18 T 09-03-2017 LS838_RS08560 4eb9c6fd7682a94d3c14ee62221dfebd 270 SUPERFAMILY SSF69360 6 104 1.09E-18 T 09-03-2017 LS838_RS08560 4eb9c6fd7682a94d3c14ee62221dfebd 270 Pfam PF01473 Putative cell wall binding repeat 21 30 0.11 T 09-03-2017 IPR018337 Cell wall/choline-binding repeat LS838_RS01060 108ac6b06f5f25cf0454d56d566ae089 157 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 6 118 3.3E-18 T 09-03-2017 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 LS838_RS01060 108ac6b06f5f25cf0454d56d566ae089 157 SUPERFAMILY SSF52309 3 157 1.71E-49 T 09-03-2017 LS838_RS01060 108ac6b06f5f25cf0454d56d566ae089 157 Gene3D G3DSA:3.40.50.1810 2 156 8.4E-56 T 09-03-2017 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 LS838_RS04475 8dae086a37b562f26188b00d70806beb 303 SUPERFAMILY SSF54211 5 184 6.0E-40 T 09-03-2017 IPR020568 Ribosomal protein S5 domain 2-type fold LS838_RS04475 8dae086a37b562f26188b00d70806beb 303 TIGRFAM TIGR00549 mevalon_kin: mevalonate kinase 7 277 2.2E-78 T 09-03-2017 IPR006205 Mevalonate kinase GO:0004496|GO:0005524|GO:0005737|GO:0008299 KEGG: 00900+2.7.1.36|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-2426168 LS838_RS04475 8dae086a37b562f26188b00d70806beb 303 SUPERFAMILY SSF55060 171 300 1.46E-26 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain LS838_RS04475 8dae086a37b562f26188b00d70806beb 303 PRINTS PR00959 Mevalonate kinase family signature 7 31 2.2E-18 T 09-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS04475 8dae086a37b562f26188b00d70806beb 303 PRINTS PR00959 Mevalonate kinase family signature 90 112 2.2E-18 T 09-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS04475 8dae086a37b562f26188b00d70806beb 303 PRINTS PR00959 Mevalonate kinase family signature 262 279 2.2E-18 T 09-03-2017 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 LS838_RS04475 8dae086a37b562f26188b00d70806beb 303 Gene3D G3DSA:3.30.70.890 176 296 9.2E-31 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain LS838_RS04475 8dae086a37b562f26188b00d70806beb 303 Gene3D G3DSA:3.30.230.10 4 175 1.6E-33 T 09-03-2017 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup LS838_RS04475 8dae086a37b562f26188b00d70806beb 303 Pfam PF08544 GHMP kinases C terminal 220 294 4.4E-10 T 09-03-2017 IPR013750 GHMP kinase, C-terminal domain LS838_RS04475 8dae086a37b562f26188b00d70806beb 303 Pfam PF00288 GHMP kinases N terminal domain 86 147 1.5E-11 T 09-03-2017 IPR006204 GHMP kinase N-terminal domain GO:0005524 LS838_RS06415 40554afd29335f74810bf8a7816a1d1c 404 Pfam PF07690 Major Facilitator Superfamily 12 266 5.6E-11 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LS838_RS06415 40554afd29335f74810bf8a7816a1d1c 404 SUPERFAMILY SSF103473 6 395 5.23E-31 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS06415 40554afd29335f74810bf8a7816a1d1c 404 Gene3D G3DSA:1.20.1250.20 244 398 4.1E-9 T 09-03-2017 LS838_RS06415 40554afd29335f74810bf8a7816a1d1c 404 Gene3D G3DSA:1.20.1250.20 7 192 2.0E-12 T 09-03-2017 LS838_RS06900 5da2533bc9ea37bf8f58372e3d6639d9 283 Pfam PF01256 Carbohydrate kinase 28 275 1.8E-56 T 09-03-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 LS838_RS06900 5da2533bc9ea37bf8f58372e3d6639d9 283 Gene3D G3DSA:3.40.1190.20 2 280 9.3E-75 T 09-03-2017 IPR029056 Ribokinase-like LS838_RS06900 5da2533bc9ea37bf8f58372e3d6639d9 283 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 9 279 4.3E-55 T 09-03-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 LS838_RS06900 5da2533bc9ea37bf8f58372e3d6639d9 283 SUPERFAMILY SSF53613 4 279 2.91E-63 T 09-03-2017 IPR029056 Ribokinase-like LS838_RS06900 5da2533bc9ea37bf8f58372e3d6639d9 283 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 219 229 - T 09-03-2017 IPR017953 Carbohydrate kinase, predicted, conserved site LS838_RS06900 5da2533bc9ea37bf8f58372e3d6639d9 283 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 5 282 23.017 T 09-03-2017 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 LS838_RS02410 898ba63b504ce645b02524bbeca4c18c 465 Pfam PF10009 Uncharacterized protein conserved in bacteria (DUF2252) 63 456 2.9E-117 T 09-03-2017 IPR018721 Protein of unknown function DUF2252 LS838_RS01310 c1a389b2036e79688796f2aefbad48da 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 303 1.1E-40 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS01310 c1a389b2036e79688796f2aefbad48da 306 Gene3D G3DSA:1.10.3720.10 88 298 3.3E-13 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS01310 c1a389b2036e79688796f2aefbad48da 306 SUPERFAMILY SSF161098 89 286 1.29E-14 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS01360 eb6131a24ab7c9fd1bf1628383253e4f 330 SMART SM01240 8 330 1.6E-114 T 09-03-2017 LS838_RS01360 eb6131a24ab7c9fd1bf1628383253e4f 330 Hamap MF_01511 GMP reductase [guaC]. 7 330 66.742 T 09-03-2017 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 LS838_RS01360 eb6131a24ab7c9fd1bf1628383253e4f 330 PIRSF PIRSF036500 5 330 2.8E-183 T 09-03-2017 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 LS838_RS01360 eb6131a24ab7c9fd1bf1628383253e4f 330 Gene3D G3DSA:3.20.20.70 8 324 1.2E-86 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LS838_RS01360 eb6131a24ab7c9fd1bf1628383253e4f 330 TIGRFAM TIGR01306 GMP_reduct_2: guanosine monophosphate reductase 10 329 6.1E-174 T 09-03-2017 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 LS838_RS01360 eb6131a24ab7c9fd1bf1628383253e4f 330 SUPERFAMILY SSF51412 5 320 1.23E-90 T 09-03-2017 LS838_RS01360 eb6131a24ab7c9fd1bf1628383253e4f 330 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 315 5.1E-71 T 09-03-2017 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 LS838_RS01360 eb6131a24ab7c9fd1bf1628383253e4f 330 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 170 182 - T 09-03-2017 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 LS838_RS02615 3112af8f96b54da6fd307ceaff8c0fd2 545 SUPERFAMILY SSF49503 388 473 4.12E-31 T 09-03-2017 IPR008972 Cupredoxin LS838_RS02615 3112af8f96b54da6fd307ceaff8c0fd2 545 SUPERFAMILY SSF49503 183 246 4.12E-31 T 09-03-2017 IPR008972 Cupredoxin LS838_RS02615 3112af8f96b54da6fd307ceaff8c0fd2 545 ProSitePatterns PS00080 Multicopper oxidases signature 2. 443 454 - T 09-03-2017 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 LS838_RS02615 3112af8f96b54da6fd307ceaff8c0fd2 545 SUPERFAMILY SSF49503 33 174 2.72E-31 T 09-03-2017 IPR008972 Cupredoxin LS838_RS02615 3112af8f96b54da6fd307ceaff8c0fd2 545 Gene3D G3DSA:2.60.40.420 33 176 8.3E-30 T 09-03-2017 IPR008972 Cupredoxin LS838_RS02615 3112af8f96b54da6fd307ceaff8c0fd2 545 Pfam PF07731 Multicopper oxidase 345 461 1.3E-27 T 09-03-2017 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 LS838_RS02615 3112af8f96b54da6fd307ceaff8c0fd2 545 Gene3D G3DSA:2.60.40.420 327 474 7.4E-34 T 09-03-2017 IPR008972 Cupredoxin LS838_RS02615 3112af8f96b54da6fd307ceaff8c0fd2 545 Gene3D G3DSA:2.60.40.420 177 294 1.3E-24 T 09-03-2017 IPR008972 Cupredoxin LS838_RS02615 3112af8f96b54da6fd307ceaff8c0fd2 545 Pfam PF07732 Multicopper oxidase 58 173 4.5E-19 T 09-03-2017 IPR011707 Multicopper oxidase, type 3 GO:0005507 LS838_RS00450 c0778d4f5232a4829605547846afac1c 52 Gene3D G3DSA:3.40.50.1000 19 51 3.1E-4 T 09-03-2017 IPR023214 HAD-like domain LS838_RS01325 4f3d54ff4bd5e7e26e4c403008927887 317 SUPERFAMILY SSF52540 8 253 1.17E-74 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01325 4f3d54ff4bd5e7e26e4c403008927887 317 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 265 5.9E-6 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LS838_RS01325 4f3d54ff4bd5e7e26e4c403008927887 317 SMART SM00382 37 277 2.5E-12 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS01325 4f3d54ff4bd5e7e26e4c403008927887 317 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS01325 4f3d54ff4bd5e7e26e4c403008927887 317 Gene3D G3DSA:3.40.50.300 6 257 2.3E-82 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01325 4f3d54ff4bd5e7e26e4c403008927887 317 Pfam PF00005 ABC transporter 29 181 3.1E-32 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS01720 33486d7ac6fbb5d351a5dded995bd904 342 Gene3D G3DSA:3.20.20.70 11 250 9.0E-85 T 09-03-2017 IPR013785 Aldolase-type TIM barrel GO:0003824 LS838_RS01720 33486d7ac6fbb5d351a5dded995bd904 342 Pfam PF01207 Dihydrouridine synthase (Dus) 17 319 4.6E-95 T 09-03-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LS838_RS01720 33486d7ac6fbb5d351a5dded995bd904 342 PIRSF PIRSF006621 4 333 5.6E-104 T 09-03-2017 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 LS838_RS01720 33486d7ac6fbb5d351a5dded995bd904 342 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 7 323 1.7E-115 T 09-03-2017 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 LS838_RS01720 33486d7ac6fbb5d351a5dded995bd904 342 Gene3D G3DSA:1.10.1200.80 256 331 9.7E-24 T 09-03-2017 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 LS838_RS01720 33486d7ac6fbb5d351a5dded995bd904 342 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 99 117 - T 09-03-2017 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 LS838_RS01720 33486d7ac6fbb5d351a5dded995bd904 342 SUPERFAMILY SSF51395 14 324 8.61E-87 T 09-03-2017 LS838_RS04765 b2537397223e1e45c9bf41ac984eb4e0 344 SUPERFAMILY SSF50129 1 164 6.6E-37 T 09-03-2017 IPR011032 GroES-like LS838_RS04765 b2537397223e1e45c9bf41ac984eb4e0 344 Gene3D G3DSA:3.90.180.10 1 167 2.7E-36 T 09-03-2017 IPR011032 GroES-like LS838_RS04765 b2537397223e1e45c9bf41ac984eb4e0 344 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 124 2.6E-20 T 09-03-2017 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 LS838_RS04765 b2537397223e1e45c9bf41ac984eb4e0 344 Pfam PF00107 Zinc-binding dehydrogenase 176 278 5.5E-19 T 09-03-2017 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 LS838_RS04765 b2537397223e1e45c9bf41ac984eb4e0 344 SUPERFAMILY SSF51735 145 307 3.08E-34 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS04765 b2537397223e1e45c9bf41ac984eb4e0 344 SMART SM00829 10 339 2.1E-4 T 09-03-2017 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 LS838_RS04765 b2537397223e1e45c9bf41ac984eb4e0 344 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 09-03-2017 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 LS838_RS04765 b2537397223e1e45c9bf41ac984eb4e0 344 Gene3D G3DSA:3.40.50.720 168 285 2.4E-33 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS09235 17f636a9370fce4ba33db38ae1aba165 245 Pfam PF03883 Protein of unknown function (DUF328) 1 232 1.7E-69 T 09-03-2017 IPR005583 Peroxide stress protein YaaA LS838_RS09235 17f636a9370fce4ba33db38ae1aba165 245 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 244 26.26 T 09-03-2017 IPR005583 Peroxide stress protein YaaA LS838_RS09450 3d658e1eea6923ae4dbf850ecdb2ae42 63 Pfam PF00939 Sodium:sulfate symporter transmembrane region 1 63 1.5E-7 T 09-03-2017 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 LS838_RS09595 1a28743501e1ea43639a82dd509def3c 402 SUPERFAMILY SSF75011 127 327 4.45E-10 T 09-03-2017 LS838_RS09595 1a28743501e1ea43639a82dd509def3c 402 Gene3D G3DSA:2.130.10.10 136 332 6.6E-7 T 09-03-2017 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 LS838_RS02070 bae6a98d1abdde6cceecadae9ca4607c 355 SUPERFAMILY SSF51126 16 124 1.82E-7 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor LS838_RS02070 bae6a98d1abdde6cceecadae9ca4607c 355 Gene3D G3DSA:2.160.20.10 17 164 2.5E-7 T 09-03-2017 IPR012334 Pectin lyase fold LS838_RS08000 4bb40a103b0665271a54524de7c03b4a 304 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 8 304 6.6E-113 T 09-03-2017 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 LS838_RS07680 641431e2044474e8e0c0933795e07794 184 Gene3D G3DSA:2.70.40.10 8 180 6.0E-38 T 09-03-2017 IPR029054 dUTPase-like LS838_RS07680 641431e2044474e8e0c0933795e07794 184 SUPERFAMILY SSF51283 3 42 1.83E-31 T 09-03-2017 IPR029054 dUTPase-like LS838_RS07680 641431e2044474e8e0c0933795e07794 184 SUPERFAMILY SSF51283 73 180 1.83E-31 T 09-03-2017 IPR029054 dUTPase-like LS838_RS07680 641431e2044474e8e0c0933795e07794 184 Pfam PF00692 dUTPase 68 179 3.4E-12 T 09-03-2017 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 LS838_RS02375 d76b2887cb2f9a62883592e42efd4dc8 246 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS02375 d76b2887cb2f9a62883592e42efd4dc8 246 SMART SM00382 29 216 8.2E-14 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS02375 d76b2887cb2f9a62883592e42efd4dc8 246 Gene3D G3DSA:3.40.50.300 3 241 2.6E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02375 d76b2887cb2f9a62883592e42efd4dc8 246 SUPERFAMILY SSF52540 4 238 1.33E-77 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02375 d76b2887cb2f9a62883592e42efd4dc8 246 Pfam PF00005 ABC transporter 20 168 3.8E-37 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS02375 d76b2887cb2f9a62883592e42efd4dc8 246 PIRSF PIRSF039085 1 245 1.6E-104 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LS838_RS00635 c3ef6ebd2b94925d85445ebe870dabaf 441 Pfam PF12323 Helix-turn-helix domain 1 45 4.9E-6 T 09-03-2017 IPR021027 Transposase, putative, helix-turn-helix domain LS838_RS00635 c3ef6ebd2b94925d85445ebe870dabaf 441 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 300 372 5.1E-11 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS00635 c3ef6ebd2b94925d85445ebe870dabaf 441 Pfam PF07282 Putative transposase DNA-binding domain 345 428 7.1E-11 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS00635 c3ef6ebd2b94925d85445ebe870dabaf 441 Pfam PF01385 Probable transposase 205 331 6.3E-15 T 09-03-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 LS838_RS09050 e89e92da447f29c3e3ca8d67c1742158 265 SUPERFAMILY SSF81345 2 255 1.7E-30 T 09-03-2017 IPR029022 ABC transporter, BtuC-like LS838_RS09050 e89e92da447f29c3e3ca8d67c1742158 265 Gene3D G3DSA:1.10.3470.10 44 262 6.1E-7 T 09-03-2017 IPR029022 ABC transporter, BtuC-like LS838_RS09050 e89e92da447f29c3e3ca8d67c1742158 265 Pfam PF00950 ABC 3 transport family 4 257 5.1E-47 T 09-03-2017 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 LS838_RS02890 082cfb6aaa1d4d7c315bd5e5849eeb04 347 Gene3D G3DSA:3.40.50.1360 97 341 5.3E-79 T 09-03-2017 LS838_RS02890 082cfb6aaa1d4d7c315bd5e5849eeb04 347 Pfam PF04198 Putative sugar-binding domain 90 341 2.0E-68 T 09-03-2017 IPR007324 Sugar-binding domain, putative GO:0030246 LS838_RS02890 082cfb6aaa1d4d7c315bd5e5849eeb04 347 Gene3D G3DSA:1.10.10.10 2 92 1.5E-31 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS02890 082cfb6aaa1d4d7c315bd5e5849eeb04 347 SUPERFAMILY SSF100950 97 341 2.57E-54 T 09-03-2017 LS838_RS02890 082cfb6aaa1d4d7c315bd5e5849eeb04 347 SUPERFAMILY SSF46785 20 84 2.81E-13 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS03785 6682650e5fc00dfbcb6401f083d010c8 1159 Pfam PF14579 Helix-hairpin-helix motif 783 868 7.9E-14 T 09-03-2017 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS03785 6682650e5fc00dfbcb6401f083d010c8 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 285 711 5.8E-133 T 09-03-2017 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS03785 6682650e5fc00dfbcb6401f083d010c8 1159 Gene3D G3DSA:3.20.20.140 16 87 1.4E-6 T 09-03-2017 LS838_RS03785 6682650e5fc00dfbcb6401f083d010c8 1159 Gene3D G3DSA:3.20.20.140 750 761 1.4E-6 T 09-03-2017 LS838_RS03785 6682650e5fc00dfbcb6401f083d010c8 1159 Pfam PF02811 PHP domain 10 133 8.2E-15 T 09-03-2017 IPR004013 PHP domain GO:0003824 LS838_RS03785 6682650e5fc00dfbcb6401f083d010c8 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 5 962 4.8E-219 T 09-03-2017 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 LS838_RS03090 7e1b76c663478a9852171c74fbb90698 145 SUPERFAMILY SSF54523 6 139 1.65E-8 T 09-03-2017 LS838_RS03090 7e1b76c663478a9852171c74fbb90698 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 24 2.6E-4 T 09-03-2017 IPR012902 Prokaryotic N-terminal methylation site LS838_RS06865 a400190a783ff78eb7ca3d77c3d45b4d 234 SUPERFAMILY SSF141523 86 217 1.26E-16 T 09-03-2017 LS838_RS06865 a400190a783ff78eb7ca3d77c3d45b4d 234 Pfam PF03734 L,D-transpeptidase catalytic domain 90 225 2.0E-12 T 09-03-2017 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 LS838_RS06865 a400190a783ff78eb7ca3d77c3d45b4d 234 Gene3D G3DSA:2.40.440.10 84 218 4.2E-14 T 09-03-2017 LS838_RS04145 384de49bd44ad3bbca79f74a40aba798 221 SUPERFAMILY SSF50037 173 215 1.1E-6 T 09-03-2017 IPR008988 Transcriptional repressor, C-terminal LS838_RS04145 384de49bd44ad3bbca79f74a40aba798 221 Pfam PF03099 Biotin/lipoate A/B protein ligase family 9 122 1.4E-11 T 09-03-2017 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 LS838_RS04145 384de49bd44ad3bbca79f74a40aba798 221 SUPERFAMILY SSF55681 3 162 1.19E-34 T 09-03-2017 LS838_RS04145 384de49bd44ad3bbca79f74a40aba798 221 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 2 217 1.7E-36 T 09-03-2017 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LS838_RS04145 384de49bd44ad3bbca79f74a40aba798 221 Pfam PF02237 Biotin protein ligase C terminal domain 174 217 1.4E-6 T 09-03-2017 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 LS838_RS04145 384de49bd44ad3bbca79f74a40aba798 221 Gene3D G3DSA:2.30.30.100 173 215 8.2E-14 T 09-03-2017 LS838_RS04145 384de49bd44ad3bbca79f74a40aba798 221 Gene3D G3DSA:3.30.930.10 2 142 6.6E-37 T 09-03-2017 LS838_RS04825 51e05522d49615aaa9c0fcd5cfcbf8e5 478 Pfam PF02321 Outer membrane efflux protein 393 452 7.9E-5 T 09-03-2017 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 LS838_RS04825 51e05522d49615aaa9c0fcd5cfcbf8e5 478 TIGRFAM TIGR02331 rib_alpha: Rib/alpha/Esp surface antigen repeat 70 138 5.9E-12 T 09-03-2017 IPR012706 Rib/alpha/Esp surface antigen LS838_RS04825 51e05522d49615aaa9c0fcd5cfcbf8e5 478 Pfam PF08428 Rib/alpha-like repeat 70 134 1.3E-11 T 09-03-2017 IPR012706 Rib/alpha/Esp surface antigen LS838_RS00150 02ed9428fb0cdb7871fc3d84aca1375b 384 Pfam PF01183 Glycosyl hydrolases family 25 41 224 2.5E-36 T 09-03-2017 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 LS838_RS00150 02ed9428fb0cdb7871fc3d84aca1375b 384 SMART SM00641 124 246 5.4E-29 T 09-03-2017 IPR018077 Glycoside hydrolase, family 25 subgroup LS838_RS00150 02ed9428fb0cdb7871fc3d84aca1375b 384 SMART SM00641 38 121 0.02 T 09-03-2017 IPR018077 Glycoside hydrolase, family 25 subgroup LS838_RS00150 02ed9428fb0cdb7871fc3d84aca1375b 384 Pfam PF03217 Bacterial surface layer protein 269 382 9.4E-36 T 09-03-2017 IPR024968 SLAP domain, Lactobacillus LS838_RS00150 02ed9428fb0cdb7871fc3d84aca1375b 384 SUPERFAMILY SSF51445 38 245 1.19E-48 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS00150 02ed9428fb0cdb7871fc3d84aca1375b 384 Gene3D G3DSA:3.20.20.80 36 233 3.7E-54 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS06125 7ae835ee58854c6f06980afc1572f041 303 Gene3D G3DSA:1.10.3720.10 94 295 6.4E-22 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS06125 7ae835ee58854c6f06980afc1572f041 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 294 3.1E-25 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS06125 7ae835ee58854c6f06980afc1572f041 303 SUPERFAMILY SSF161098 93 282 1.26E-20 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS06095 95de2ff1147b3d5278a6d751d6ee691e 473 Pfam PF03577 Peptidase family C69 5 402 1.4E-146 T 09-03-2017 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 LS838_RS09410 8a2b5fc6ff2e95cfa8e0d228ac269284 269 SUPERFAMILY SSF56784 1 265 7.64E-61 T 09-03-2017 IPR023214 HAD-like domain LS838_RS09410 8a2b5fc6ff2e95cfa8e0d228ac269284 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 09-03-2017 IPR000150 Cof protein GO:0016787 LS838_RS09410 8a2b5fc6ff2e95cfa8e0d228ac269284 269 Gene3D G3DSA:3.40.50.1000 1 76 2.6E-49 T 09-03-2017 IPR023214 HAD-like domain LS838_RS09410 8a2b5fc6ff2e95cfa8e0d228ac269284 269 Gene3D G3DSA:3.40.50.1000 169 266 2.6E-49 T 09-03-2017 IPR023214 HAD-like domain LS838_RS09410 8a2b5fc6ff2e95cfa8e0d228ac269284 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 260 5.1E-52 T 09-03-2017 IPR023214 HAD-like domain LS838_RS09410 8a2b5fc6ff2e95cfa8e0d228ac269284 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 88 1.4E-11 T 09-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 LS838_RS09410 8a2b5fc6ff2e95cfa8e0d228ac269284 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 260 4.2E-49 T 09-03-2017 IPR000150 Cof protein GO:0016787 LS838_RS00085 3b77a543a30211277e221e656dc23ba3 234 PRINTS PR01837 MgtC/SapB protein signature 41 59 2.9E-38 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LS838_RS00085 3b77a543a30211277e221e656dc23ba3 234 PRINTS PR01837 MgtC/SapB protein signature 102 126 2.9E-38 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LS838_RS00085 3b77a543a30211277e221e656dc23ba3 234 PRINTS PR01837 MgtC/SapB protein signature 22 41 2.9E-38 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LS838_RS00085 3b77a543a30211277e221e656dc23ba3 234 PRINTS PR01837 MgtC/SapB protein signature 75 97 2.9E-38 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LS838_RS00085 3b77a543a30211277e221e656dc23ba3 234 Pfam PF02308 MgtC family 19 145 1.9E-33 T 09-03-2017 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 LS838_RS06130 cd8cb4a3992b298ffe6bddfddb843b83 319 SUPERFAMILY SSF161098 90 300 3.4E-15 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS06130 cd8cb4a3992b298ffe6bddfddb843b83 319 Gene3D G3DSA:1.10.3720.10 91 313 1.8E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS06130 cd8cb4a3992b298ffe6bddfddb843b83 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 317 1.8E-38 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS04660 6f4af9d31573e332921b9953c1fbc0e5 172 SUPERFAMILY SSF55469 1 167 5.23E-28 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 LS838_RS04660 6f4af9d31573e332921b9953c1fbc0e5 172 Gene3D G3DSA:3.40.109.10 1 162 2.4E-30 T 09-03-2017 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 LS838_RS04660 6f4af9d31573e332921b9953c1fbc0e5 172 Pfam PF00881 Nitroreductase family 7 151 4.8E-16 T 09-03-2017 IPR029479 Nitroreductase Reactome: R-HSA-209968 LS838_RS01905 0c94466383b57c79a995c87000bfa5fb 132 SUPERFAMILY SSF56047 3 132 6.41E-50 T 09-03-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01905 0c94466383b57c79a995c87000bfa5fb 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 09-03-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01905 0c94466383b57c79a995c87000bfa5fb 132 Pfam PF00410 Ribosomal protein S8 5 132 1.1E-54 T 09-03-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS01905 0c94466383b57c79a995c87000bfa5fb 132 Gene3D G3DSA:3.30.1490.10 76 132 3.3E-30 T 09-03-2017 LS838_RS01905 0c94466383b57c79a995c87000bfa5fb 132 Gene3D G3DSA:3.30.1370.30 3 73 2.2E-31 T 09-03-2017 LS838_RS01905 0c94466383b57c79a995c87000bfa5fb 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 33.146 T 09-03-2017 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 LS838_RS02350 8f2a07a0c4ba387045eed5c79a1e8b99 473 Pfam PF03577 Peptidase family C69 7 406 3.4E-158 T 09-03-2017 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 LS838_RS02545 db3d11d52697db231e8fbd8043c8ad9e 159 Pfam PF04138 GtrA-like protein 25 139 5.9E-18 T 09-03-2017 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 LS838_RS07505 224f9bd3184abf84765f67d088c5144a 122 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 3.5E-16 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LS838_RS07505 224f9bd3184abf84765f67d088c5144a 122 SUPERFAMILY SSF46785 2 76 2.9E-20 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS07505 224f9bd3184abf84765f67d088c5144a 122 Gene3D G3DSA:1.10.10.10 2 73 1.1E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS07505 224f9bd3184abf84765f67d088c5144a 122 SMART SM00345 13 72 6.7E-16 T 09-03-2017 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 LS838_RS03240 66033ab6063471c1e3d3fae78fac0b5a 76 TIGRFAM TIGR02327 int_mem_ywzB: conserved hypothetical integral membrane protein 9 76 1.8E-12 T 09-03-2017 IPR009526 Protein of unknown function DUF1146 LS838_RS03240 66033ab6063471c1e3d3fae78fac0b5a 76 Pfam PF06612 Protein of unknown function (DUF1146) 16 63 8.5E-18 T 09-03-2017 IPR009526 Protein of unknown function DUF1146 LS838_RS02975 52ad98256dd9e24347591e069b9613a1 316 Pfam PF07949 YbbR-like protein 55 131 2.3E-9 T 09-03-2017 IPR012505 YbbR-like LS838_RS02975 52ad98256dd9e24347591e069b9613a1 316 Pfam PF07949 YbbR-like protein 140 224 1.2E-13 T 09-03-2017 IPR012505 YbbR-like LS838_RS02975 52ad98256dd9e24347591e069b9613a1 316 Pfam PF07949 YbbR-like protein 246 309 1.4E-9 T 09-03-2017 IPR012505 YbbR-like LS838_RS08850 74b166410b34baf47eff73449e32cf51 371 Gene3D G3DSA:3.40.50.720 181 256 3.8E-43 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS08850 74b166410b34baf47eff73449e32cf51 371 Gene3D G3DSA:3.40.50.720 325 368 3.8E-43 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS08850 74b166410b34baf47eff73449e32cf51 371 Gene3D G3DSA:3.40.50.720 7 78 3.8E-43 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS08850 74b166410b34baf47eff73449e32cf51 371 SUPERFAMILY SSF54373 247 317 1.92E-25 T 09-03-2017 LS838_RS08850 74b166410b34baf47eff73449e32cf51 371 Pfam PF03275 UDP-galactopyranose mutase 146 351 3.5E-87 T 09-03-2017 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 LS838_RS08850 74b166410b34baf47eff73449e32cf51 371 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 3 367 5.4E-131 T 09-03-2017 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 LS838_RS08850 74b166410b34baf47eff73449e32cf51 371 SUPERFAMILY SSF51971 336 366 1.88E-54 T 09-03-2017 LS838_RS08850 74b166410b34baf47eff73449e32cf51 371 SUPERFAMILY SSF51971 4 265 1.88E-54 T 09-03-2017 LS838_RS08850 74b166410b34baf47eff73449e32cf51 371 Pfam PF13450 NAD(P)-binding Rossmann-like domain 7 72 1.1E-19 T 09-03-2017 LS838_RS05160 8f23a29119e21cc39c91151d7fc3a374 135 SUPERFAMILY SSF111331 7 134 2.62E-11 T 09-03-2017 IPR016064 NAD kinase/diacylglycerol kinase-like domain LS838_RS01735 65be89b956d3a6fcc394447ffc3f7389 516 Pfam PF07282 Putative transposase DNA-binding domain 423 490 4.2E-14 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS05360 3f58340ccbc2e5909850f27abb9c464f 166 Gene3D G3DSA:1.25.10.10 100 149 9.3E-5 T 09-03-2017 IPR011989 Armadillo-like helical LS838_RS08295 4368825fb7fb637dbf42c1582158af25 288 Pfam PF11738 Protein of unknown function (DUF3298) 197 279 8.5E-15 T 09-03-2017 IPR021729 Domain of unknown function DUF3298 LS838_RS08295 4368825fb7fb637dbf42c1582158af25 288 Gene3D G3DSA:3.90.640.20 197 285 1.3E-20 T 09-03-2017 IPR021729 Domain of unknown function DUF3298 LS838_RS08435 36815833866a53437a7a85e93f6127da 265 SUPERFAMILY SSF47413 2 68 4.69E-5 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS08435 36815833866a53437a7a85e93f6127da 265 Pfam PF13413 Helix-turn-helix domain 7 65 7.2E-17 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS08435 36815833866a53437a7a85e93f6127da 265 Gene3D G3DSA:1.10.260.40 2 88 9.4E-8 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS01090 a470ac2519fb2f9ea55fe880708abe31 266 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 17 264 3.8E-88 T 09-03-2017 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 LS838_RS01090 a470ac2519fb2f9ea55fe880708abe31 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 256 6.9E-17 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS01090 a470ac2519fb2f9ea55fe880708abe31 266 Gene3D G3DSA:1.10.3720.10 68 263 3.5E-28 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS01090 a470ac2519fb2f9ea55fe880708abe31 266 SUPERFAMILY SSF161098 71 256 1.57E-35 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS09575 654f61bf366adeec0f03f794f3df1454 410 TIGRFAM TIGR04091 LTA_dltB: D-alanyl-lipoteichoic acid biosynthesis protein DltB 5 399 7.5E-164 T 09-03-2017 IPR024024 D-alanyl transfer protein DltB LS838_RS09575 654f61bf366adeec0f03f794f3df1454 410 PIRSF PIRSF016636 6 402 9.3E-77 T 09-03-2017 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB LS838_RS09575 654f61bf366adeec0f03f794f3df1454 410 PIRSF PIRSF500216 3 404 2.9E-172 T 09-03-2017 IPR024024 D-alanyl transfer protein DltB LS838_RS09575 654f61bf366adeec0f03f794f3df1454 410 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 58 385 6.0E-21 T 09-03-2017 IPR004299 Membrane bound O-acyl transferase, MBOAT LS838_RS08620 4624f6da860cd4d31468e7f2fcb23cfb 258 Pfam PF14393 Domain of unknown function (DUF4422) 4 219 1.5E-85 T 09-03-2017 IPR025536 Domain of unknown function DUF4422 LS838_RS09375 8a0073c4330a4a1e1e6019093340b267 78 Gene3D G3DSA:1.10.260.40 5 64 1.1E-4 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS00420 b5c509211ff62da517b55a0ef7d9aeb0 63 Pfam PF14239 RRXRR protein 9 44 2.9E-9 T 09-03-2017 IPR025938 RRXRR domain LS838_RS09940 688f8446184b193457d371be74bdf01a 289 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 71 256 7.6E-65 T 09-03-2017 IPR028055 Membrane insertase YidC/Oxa1, C-terminal LS838_RS09940 688f8446184b193457d371be74bdf01a 289 Pfam PF02096 60Kd inner membrane protein 72 256 3.2E-57 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LS838_RS09940 688f8446184b193457d371be74bdf01a 289 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 10 260 30.446 T 09-03-2017 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes LS838_RS09940 688f8446184b193457d371be74bdf01a 289 PRINTS PR00701 60kDa inner membrane protein signature 137 160 1.2E-10 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LS838_RS09940 688f8446184b193457d371be74bdf01a 289 PRINTS PR00701 60kDa inner membrane protein signature 182 204 1.2E-10 T 09-03-2017 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 LS838_RS05480 aefc536d48dcb644ce5ba6c8ac4c1136 1188 SUPERFAMILY SSF52540 167 189 3.61E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05480 aefc536d48dcb644ce5ba6c8ac4c1136 1188 SUPERFAMILY SSF52540 65 110 3.61E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05480 aefc536d48dcb644ce5ba6c8ac4c1136 1188 SUPERFAMILY SSF52540 223 334 3.61E-5 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS00410 d9b2c8bbb8682efde2e8ffe4ba9915bb 217 SUPERFAMILY SSF53254 1 211 9.16E-43 T 09-03-2017 IPR029033 Histidine phosphatase superfamily LS838_RS00410 d9b2c8bbb8682efde2e8ffe4ba9915bb 217 SMART SM00855 3 177 1.1E-21 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LS838_RS00410 d9b2c8bbb8682efde2e8ffe4ba9915bb 217 Gene3D G3DSA:3.40.50.1240 1 212 3.7E-43 T 09-03-2017 IPR029033 Histidine phosphatase superfamily LS838_RS00410 d9b2c8bbb8682efde2e8ffe4ba9915bb 217 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 205 1.8E-31 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LS838_RS00100 166d8bf6bc0415a1987c8caa4701686b 403 Gene3D G3DSA:1.20.1250.20 15 182 2.2E-11 T 09-03-2017 LS838_RS00100 166d8bf6bc0415a1987c8caa4701686b 403 Pfam PF07690 Major Facilitator Superfamily 17 364 4.2E-18 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LS838_RS00100 166d8bf6bc0415a1987c8caa4701686b 403 SUPERFAMILY SSF103473 12 378 1.44E-23 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS04675 32742cc8d205478b91fc9134a91b57b0 358 Gene3D G3DSA:1.10.443.10 180 346 2.0E-37 T 09-03-2017 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 LS838_RS04675 32742cc8d205478b91fc9134a91b57b0 358 SUPERFAMILY SSF56349 182 346 2.41E-33 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LS838_RS04675 32742cc8d205478b91fc9134a91b57b0 358 Pfam PF00589 Phage integrase family 185 338 6.4E-23 T 09-03-2017 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 LS838_RS04675 32742cc8d205478b91fc9134a91b57b0 358 Gene3D G3DSA:1.10.150.130 16 114 7.9E-12 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal LS838_RS04675 32742cc8d205478b91fc9134a91b57b0 358 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 30 113 7.1E-8 T 09-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 LS838_RS06515 11bdc937b25d6937ede29ef314f37964 418 SUPERFAMILY SSF53383 37 366 1.54E-33 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase LS838_RS06515 11bdc937b25d6937ede29ef314f37964 418 Gene3D G3DSA:3.40.640.10 31 265 7.0E-27 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LS838_RS06515 11bdc937b25d6937ede29ef314f37964 418 Pfam PF06838 Methionine gamma-lyase 11 412 7.1E-174 T 09-03-2017 IPR009651 Putative methionine gamma-lyase LS838_RS09760 b0b0ddf95560a43f79e5bfce58411943 133 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 4 107 2.2E-16 T 09-03-2017 IPR006440 Death on curing protein GO:0016301 LS838_RS09760 b0b0ddf95560a43f79e5bfce58411943 133 Gene3D G3DSA:1.10.3290.10 53 115 2.2E-4 T 09-03-2017 IPR003812 Fido domain LS838_RS09760 b0b0ddf95560a43f79e5bfce58411943 133 Pfam PF02661 Fic/DOC family 3 86 8.3E-12 T 09-03-2017 IPR003812 Fido domain LS838_RS09760 b0b0ddf95560a43f79e5bfce58411943 133 SUPERFAMILY SSF140931 47 100 2.49E-7 T 09-03-2017 IPR003812 Fido domain LS838_RS04355 8dca849d103efa1e502b5192b59c1a07 501 Gene3D G3DSA:3.40.50.300 2 55 2.4E-10 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04355 8dca849d103efa1e502b5192b59c1a07 501 Pfam PF00005 ABC transporter 330 456 1.0E-17 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS04355 8dca849d103efa1e502b5192b59c1a07 501 Pfam PF00005 ABC transporter 22 144 6.4E-11 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS04355 8dca849d103efa1e502b5192b59c1a07 501 SUPERFAMILY SSF52540 3 201 2.59E-36 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04355 8dca849d103efa1e502b5192b59c1a07 501 ProSitePatterns PS00211 ABC transporters family signature. 428 442 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS04355 8dca849d103efa1e502b5192b59c1a07 501 Gene3D G3DSA:3.40.50.300 95 191 6.1E-23 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04355 8dca849d103efa1e502b5192b59c1a07 501 ProSitePatterns PS00211 ABC transporters family signature. 116 130 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS04355 8dca849d103efa1e502b5192b59c1a07 501 Gene3D G3DSA:3.40.50.300 317 493 1.1E-28 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS04355 8dca849d103efa1e502b5192b59c1a07 501 SMART SM00382 338 501 8.0E-4 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS04355 8dca849d103efa1e502b5192b59c1a07 501 SMART SM00382 30 189 6.0E-6 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS04355 8dca849d103efa1e502b5192b59c1a07 501 SUPERFAMILY SSF52540 318 495 7.14E-31 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS01475 70827f0b198747e89dfc0699b4491a85 88 Pfam PF06961 Protein of unknown function (DUF1294) 13 66 7.4E-20 T 09-03-2017 IPR010718 Protein of unknown function DUF1294 LS838_RS04915 daacb9c3b2b5d3e49bb247f8c2b3062b 102 Gene3D G3DSA:3.40.250.10 16 100 3.0E-28 T 09-03-2017 IPR001763 Rhodanese-like domain LS838_RS04915 daacb9c3b2b5d3e49bb247f8c2b3062b 102 Pfam PF00581 Rhodanese-like domain 14 97 2.9E-15 T 09-03-2017 IPR001763 Rhodanese-like domain LS838_RS04915 daacb9c3b2b5d3e49bb247f8c2b3062b 102 SMART SM00450 8 102 3.4E-16 T 09-03-2017 IPR001763 Rhodanese-like domain LS838_RS04915 daacb9c3b2b5d3e49bb247f8c2b3062b 102 SUPERFAMILY SSF52821 16 97 4.85E-26 T 09-03-2017 IPR001763 Rhodanese-like domain LS838_RS05430 0bee07395e2d52f44c6b5ed491390fb4 146 Gene3D G3DSA:3.90.79.10 9 131 3.0E-27 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LS838_RS05430 0bee07395e2d52f44c6b5ed491390fb4 146 SUPERFAMILY SSF55811 7 130 1.3E-23 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LS838_RS05430 0bee07395e2d52f44c6b5ed491390fb4 146 Pfam PF00293 NUDIX domain 13 122 1.3E-14 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LS838_RS01430 4a244e172315d63bf3d00db67e2b5893 310 Pfam PF02574 Homocysteine S-methyltransferase 15 303 9.1E-64 T 09-03-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 LS838_RS01430 4a244e172315d63bf3d00db67e2b5893 310 SUPERFAMILY SSF82282 3 305 2.22E-79 T 09-03-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 LS838_RS01430 4a244e172315d63bf3d00db67e2b5893 310 Gene3D G3DSA:3.20.20.330 2 305 9.8E-85 T 09-03-2017 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 LS838_RS05050 cfb5bdd2b0b5efc321ed04a97c3d6b8c 249 Pfam PF08241 Methyltransferase domain 63 158 3.2E-17 T 09-03-2017 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 LS838_RS05050 cfb5bdd2b0b5efc321ed04a97c3d6b8c 249 Gene3D G3DSA:3.40.50.150 49 236 2.2E-27 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS05050 cfb5bdd2b0b5efc321ed04a97c3d6b8c 249 SUPERFAMILY SSF53335 51 230 3.34E-25 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS01200 2a2b715296c1ab536c90cb51c2bf3455 612 Gene3D G3DSA:3.30.70.1450 546 609 7.2E-10 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LS838_RS01200 2a2b715296c1ab536c90cb51c2bf3455 612 Pfam PF02080 TrkA-C domain 546 608 5.8E-8 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LS838_RS01200 2a2b715296c1ab536c90cb51c2bf3455 612 SUPERFAMILY SSF51735 399 496 9.45E-12 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS01200 2a2b715296c1ab536c90cb51c2bf3455 612 Pfam PF00999 Sodium/hydrogen exchanger family 7 384 7.8E-54 T 09-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LS838_RS01200 2a2b715296c1ab536c90cb51c2bf3455 612 SUPERFAMILY SSF116726 535 609 1.7E-12 T 09-03-2017 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 LS838_RS01200 2a2b715296c1ab536c90cb51c2bf3455 612 Pfam PF02254 TrkA-N domain 400 492 1.6E-6 T 09-03-2017 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 LS838_RS01200 2a2b715296c1ab536c90cb51c2bf3455 612 Gene3D G3DSA:3.40.50.720 396 530 1.1E-13 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS07130 37eb973cfc0623fc5211f29c83351c40 131 SMART SM01323 15 98 6.3E-30 T 09-03-2017 IPR003849 Preprotein translocase YajC LS838_RS07130 37eb973cfc0623fc5211f29c83351c40 131 Pfam PF02699 Preprotein translocase subunit 19 95 9.5E-22 T 09-03-2017 IPR003849 Preprotein translocase YajC LS838_RS07130 37eb973cfc0623fc5211f29c83351c40 131 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 16 99 2.9E-19 T 09-03-2017 IPR003849 Preprotein translocase YajC LS838_RS07130 37eb973cfc0623fc5211f29c83351c40 131 PRINTS PR01853 Bacterial YajC preprotein translocase signature 37 55 1.0E-8 T 09-03-2017 IPR003849 Preprotein translocase YajC LS838_RS07130 37eb973cfc0623fc5211f29c83351c40 131 PRINTS PR01853 Bacterial YajC preprotein translocase signature 17 37 1.0E-8 T 09-03-2017 IPR003849 Preprotein translocase YajC LS838_RS06670 2db8f813264649a9f1af39d2c4cb5419 207 Pfam PF03596 Cadmium resistance transporter 12 203 5.6E-87 T 09-03-2017 IPR004676 Cadmium resistance transporter LS838_RS06670 2db8f813264649a9f1af39d2c4cb5419 207 TIGRFAM TIGR00779 cad: cadmium resistance transporter family protein 12 204 7.9E-65 T 09-03-2017 IPR004676 Cadmium resistance transporter LS838_RS08350 5d04161183e4b010d833b274432b3cf2 1409 Gene3D G3DSA:1.20.1640.10 1205 1375 1.5E-17 T 09-03-2017 LS838_RS08350 5d04161183e4b010d833b274432b3cf2 1409 Gene3D G3DSA:1.20.1640.10 135 342 9.5E-31 T 09-03-2017 LS838_RS08350 5d04161183e4b010d833b274432b3cf2 1409 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 1045 1072 6.7E-7 T 09-03-2017 IPR023908 xxxLxxG heptad repeat LS838_RS08350 5d04161183e4b010d833b274432b3cf2 1409 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 502 529 3.0E-7 T 09-03-2017 IPR023908 xxxLxxG heptad repeat LS838_RS08350 5d04161183e4b010d833b274432b3cf2 1409 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 1011 1037 1.6E-5 T 09-03-2017 IPR023908 xxxLxxG heptad repeat LS838_RS08350 5d04161183e4b010d833b274432b3cf2 1409 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 1095 1121 4.6E-5 T 09-03-2017 IPR023908 xxxLxxG heptad repeat LS838_RS08350 5d04161183e4b010d833b274432b3cf2 1409 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 955 981 2.8E-4 T 09-03-2017 IPR023908 xxxLxxG heptad repeat LS838_RS08350 5d04161183e4b010d833b274432b3cf2 1409 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 567 592 3.3E-5 T 09-03-2017 IPR023908 xxxLxxG heptad repeat LS838_RS08350 5d04161183e4b010d833b274432b3cf2 1409 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 482 508 2.7E-4 T 09-03-2017 IPR023908 xxxLxxG heptad repeat LS838_RS08350 5d04161183e4b010d833b274432b3cf2 1409 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 593 620 3.7E-5 T 09-03-2017 IPR023908 xxxLxxG heptad repeat LS838_RS08350 5d04161183e4b010d833b274432b3cf2 1409 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 509 536 5.2E-5 T 09-03-2017 IPR023908 xxxLxxG heptad repeat LS838_RS08350 5d04161183e4b010d833b274432b3cf2 1409 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 982 1009 1.7E-4 T 09-03-2017 IPR023908 xxxLxxG heptad repeat LS838_RS08350 5d04161183e4b010d833b274432b3cf2 1409 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 1077 1100 7.4E-5 T 09-03-2017 IPR023908 xxxLxxG heptad repeat LS838_RS08350 5d04161183e4b010d833b274432b3cf2 1409 SUPERFAMILY SSF82866 1170 1392 7.46E-24 T 09-03-2017 LS838_RS08350 5d04161183e4b010d833b274432b3cf2 1409 SUPERFAMILY SSF82866 142 340 4.97E-31 T 09-03-2017 LS838_RS08350 5d04161183e4b010d833b274432b3cf2 1409 Pfam PF03176 MMPL family 1082 1375 1.4E-32 T 09-03-2017 IPR004869 Membrane transport protein, MMPL domain GO:0016020 LS838_RS08350 5d04161183e4b010d833b274432b3cf2 1409 Pfam PF03176 MMPL family 48 365 9.4E-54 T 09-03-2017 IPR004869 Membrane transport protein, MMPL domain GO:0016020 LS838_RS08350 5d04161183e4b010d833b274432b3cf2 1409 Gene3D G3DSA:2.150.10.10 490 613 5.1E-5 T 09-03-2017 IPR011049 Serralysin-like metalloprotease, C-terminal LS838_RS08350 5d04161183e4b010d833b274432b3cf2 1409 SUPERFAMILY SSF101967 550 705 5.89E-10 T 09-03-2017 LS838_RS08330 aa6d476d881124d32638669895d05bd9 165 SUPERFAMILY SSF52309 5 161 3.36E-42 T 09-03-2017 LS838_RS08330 aa6d476d881124d32638669895d05bd9 165 Gene3D G3DSA:3.40.50.1810 2 162 1.1E-51 T 09-03-2017 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 LS838_RS08330 aa6d476d881124d32638669895d05bd9 165 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 7 120 5.4E-21 T 09-03-2017 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 LS838_RS08065 966d081e93218c983695bae47edd2663 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 166 177 2.7E-50 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LS838_RS08065 966d081e93218c983695bae47edd2663 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 97 110 2.7E-50 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LS838_RS08065 966d081e93218c983695bae47edd2663 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 140 157 2.7E-50 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LS838_RS08065 966d081e93218c983695bae47edd2663 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 2.7E-50 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LS838_RS08065 966d081e93218c983695bae47edd2663 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 111 131 2.7E-50 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LS838_RS08065 966d081e93218c983695bae47edd2663 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 76 92 2.7E-50 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LS838_RS08065 966d081e93218c983695bae47edd2663 444 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 2.7E-50 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LS838_RS08065 966d081e93218c983695bae47edd2663 444 SUPERFAMILY SSF56327 170 444 7.38E-85 T 09-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 LS838_RS08065 966d081e93218c983695bae47edd2663 444 SUPERFAMILY SSF51735 5 167 8.95E-52 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS08065 966d081e93218c983695bae47edd2663 444 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 419 1.5E-46 T 09-03-2017 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 LS838_RS08065 966d081e93218c983695bae47edd2663 444 Gene3D G3DSA:3.40.50.720 4 167 1.7E-63 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS08065 966d081e93218c983695bae47edd2663 444 Pfam PF02056 Family 4 glycosyl hydrolase 8 184 1.1E-60 T 09-03-2017 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 LS838_RS08065 966d081e93218c983695bae47edd2663 444 Gene3D G3DSA:3.90.110.10 169 442 1.5E-89 T 09-03-2017 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 LS838_RS03735 2a0e9a3bdbe21744f658228e639b593d 63 SUPERFAMILY SSF57829 1 54 1.04E-16 T 09-03-2017 IPR011332 Zinc-binding ribosomal protein GO:0006412 LS838_RS03735 2a0e9a3bdbe21744f658228e639b593d 63 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.37 T 09-03-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS03735 2a0e9a3bdbe21744f658228e639b593d 63 Pfam PF01783 Ribosomal L32p protein family 2 55 2.0E-20 T 09-03-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS03735 2a0e9a3bdbe21744f658228e639b593d 63 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 6.5E-20 T 09-03-2017 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 LS838_RS07515 fac434248748a70e5b4cf71a1908e82e 174 SUPERFAMILY SSF55811 5 170 4.06E-39 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LS838_RS07515 fac434248748a70e5b4cf71a1908e82e 174 PRINTS PR00502 NUDIX hydrolase family signature 66 80 3.2E-6 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 LS838_RS07515 fac434248748a70e5b4cf71a1908e82e 174 PRINTS PR00502 NUDIX hydrolase family signature 80 95 3.2E-6 T 09-03-2017 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 LS838_RS07515 fac434248748a70e5b4cf71a1908e82e 174 ProSitePatterns PS00893 Nudix box signature. 71 92 - T 09-03-2017 IPR020084 NUDIX hydrolase, conserved site GO:0016787 LS838_RS07515 fac434248748a70e5b4cf71a1908e82e 174 Pfam PF00293 NUDIX domain 40 149 3.7E-19 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LS838_RS07515 fac434248748a70e5b4cf71a1908e82e 174 Gene3D G3DSA:3.90.79.10 4 169 5.4E-40 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LS838_RS09640 a6c2d8933f6b298f57cdeaa5992fd6bf 366 Pfam PF02698 DUF218 domain 184 334 6.9E-28 T 09-03-2017 IPR003848 Domain of unknown function DUF218 LS838_RS09640 a6c2d8933f6b298f57cdeaa5992fd6bf 366 Gene3D G3DSA:3.40.50.620 179 320 1.2E-24 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS06260 a858726ff20e8c43eec479771a4c37f7 287 SUPERFAMILY SSF48576 5 267 1.23E-71 T 09-03-2017 IPR008949 Isoprenoid synthase domain LS838_RS06260 a858726ff20e8c43eec479771a4c37f7 287 Gene3D G3DSA:1.10.600.10 2 274 1.4E-74 T 09-03-2017 IPR008949 Isoprenoid synthase domain LS838_RS06260 a858726ff20e8c43eec479771a4c37f7 287 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 209 221 - T 09-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 LS838_RS06260 a858726ff20e8c43eec479771a4c37f7 287 Pfam PF00348 Polyprenyl synthetase 31 266 1.2E-49 T 09-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 LS838_RS06260 a858726ff20e8c43eec479771a4c37f7 287 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 82 98 - T 09-03-2017 IPR000092 Polyprenyl synthetase GO:0008299 LS838_RS08610 20608b611b740ef5425f0b08a90cbaf0 301 Gene3D G3DSA:3.90.550.10 6 237 8.0E-41 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS08610 20608b611b740ef5425f0b08a90cbaf0 301 SUPERFAMILY SSF53448 3 233 8.44E-40 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS08610 20608b611b740ef5425f0b08a90cbaf0 301 Pfam PF00535 Glycosyl transferase family 2 6 108 4.0E-24 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 LS838_RS03345 b3ade7a8bdde1f1a33e39f2f2a885f10 40 Pfam PF13253 Protein of unknown function (DUF4044) 4 35 1.0E-12 T 09-03-2017 IPR025270 Protein of unknown function DUF4044 LS838_RS02245 3029254a19b6916dc3256bdcf7266bca 446 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 15 427 1.4E-153 T 09-03-2017 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 LS838_RS02245 3029254a19b6916dc3256bdcf7266bca 446 Pfam PF05525 Branched-chain amino acid transport protein 7 439 1.6E-153 T 09-03-2017 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 LS838_RS02315 0c5a2c2a21bc82dd67aa74304ed0d2c8 314 Pfam PF03547 Membrane transport protein 7 154 6.5E-13 T 09-03-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 LS838_RS02315 0c5a2c2a21bc82dd67aa74304ed0d2c8 314 Pfam PF03547 Membrane transport protein 160 304 5.8E-12 T 09-03-2017 IPR004776 Membrane transport protein GO:0016021|GO:0055085 LS838_RS08975 1ddb165b6cfb93da77d103702412c0ef 111 Pfam PF09953 Uncharacterized protein conserved in bacteria (DUF2187) 9 66 6.2E-6 T 09-03-2017 IPR018690 Protein of unknown function DUF2187 LS838_RS06705 8a183ed9e7f4adfab3221e92b6eed134 516 Pfam PF07282 Putative transposase DNA-binding domain 423 490 5.5E-13 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS00485 e6c185b71ad1507ce728aa7bc69452de 182 Pfam PF12822 Protein of unknown function (DUF3816) 10 162 2.4E-10 T 09-03-2017 IPR024529 ECF transporter, substrate-specific component GO:0005215 LS838_RS06525 efc30034dbd41eb2484bb0d07c99e8f5 133 Gene3D G3DSA:3.40.250.10 28 126 1.5E-20 T 09-03-2017 IPR001763 Rhodanese-like domain LS838_RS06525 efc30034dbd41eb2484bb0d07c99e8f5 133 SMART SM00450 33 130 1.5E-12 T 09-03-2017 IPR001763 Rhodanese-like domain LS838_RS06525 efc30034dbd41eb2484bb0d07c99e8f5 133 SUPERFAMILY SSF52821 27 124 3.14E-23 T 09-03-2017 IPR001763 Rhodanese-like domain LS838_RS06525 efc30034dbd41eb2484bb0d07c99e8f5 133 Pfam PF00581 Rhodanese-like domain 38 125 9.4E-14 T 09-03-2017 IPR001763 Rhodanese-like domain LS838_RS07255 dd2cfe2e409238cc486df96190f264fb 200 Pfam PF05175 Methyltransferase small domain 28 196 9.1E-49 T 09-03-2017 IPR007848 Methyltransferase small domain GO:0008168 LS838_RS07255 dd2cfe2e409238cc486df96190f264fb 200 Gene3D G3DSA:3.40.50.150 15 198 1.5E-33 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS07255 dd2cfe2e409238cc486df96190f264fb 200 SUPERFAMILY SSF53335 7 199 8.97E-38 T 09-03-2017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase LS838_RS07995 55e23596f8246239ac6f3c0bd0146f2b 122 Pfam PF06115 Domain of unknown function (DUF956) 1 116 4.7E-52 T 09-03-2017 IPR010360 Protein of unknown function DUF956 LS838_RS07995 55e23596f8246239ac6f3c0bd0146f2b 122 PIRSF PIRSF021265 1 122 3.6E-50 T 09-03-2017 IPR010360 Protein of unknown function DUF956 LS838_RS09180 a7bd6f4c68552e54e7374b2d748f42ec 466 Pfam PF03577 Peptidase family C69 8 397 1.5E-130 T 09-03-2017 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 LS838_RS08765 5095644f2282e9176f08a3d8d427f649 174 Gene3D G3DSA:1.10.357.10 11 159 1.3E-11 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LS838_RS08765 5095644f2282e9176f08a3d8d427f649 174 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 53 1.2E-5 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LS838_RS08765 5095644f2282e9176f08a3d8d427f649 174 SUPERFAMILY SSF46689 6 62 2.77E-11 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS02085 8ecad42d46c21d26a98f9fa0547da17a 478 Pfam PF01943 Polysaccharide biosynthesis protein 7 269 4.6E-27 T 09-03-2017 IPR002797 Polysaccharide biosynthesis protein GO:0016020 LS838_RS02085 8ecad42d46c21d26a98f9fa0547da17a 478 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 322 458 4.8E-13 T 09-03-2017 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain LS838_RS00510 99f9b59ec60ded5f6f8f39d62211924a 293 Pfam PF03180 NLPA lipoprotein 44 284 9.6E-59 T 09-03-2017 IPR004872 Lipoprotein NlpA family LS838_RS00510 99f9b59ec60ded5f6f8f39d62211924a 293 Gene3D G3DSA:3.40.190.10 42 173 4.7E-40 T 09-03-2017 LS838_RS00510 99f9b59ec60ded5f6f8f39d62211924a 293 SUPERFAMILY SSF53850 42 285 2.04E-63 T 09-03-2017 LS838_RS01625 67895621cdc9fcbbed229c22220ba978 193 TIGRFAM TIGR04567 RNAP_delt_lowGC: DNA-directed RNA polymerase delta subunit 12 93 1.0E-33 T 09-03-2017 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 LS838_RS01625 67895621cdc9fcbbed229c22220ba978 193 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 15 81 8.9E-12 T 09-03-2017 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 LS838_RS01625 67895621cdc9fcbbed229c22220ba978 193 Hamap MF_00357 Probable DNA-directed RNA polymerase subunit delta [rpoE]. 9 168 14.149 T 09-03-2017 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 LS838_RS06665 2579f4cc10c1be0b3a1ab4dc787c8cdd 284 Pfam PF13276 HTH-like domain 40 93 2.2E-9 T 09-03-2017 IPR025948 HTH-like domain LS838_RS06665 2579f4cc10c1be0b3a1ab4dc787c8cdd 284 SUPERFAMILY SSF53098 117 275 7.21E-25 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS06665 2579f4cc10c1be0b3a1ab4dc787c8cdd 284 Gene3D G3DSA:3.30.420.10 114 273 2.5E-24 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS06665 2579f4cc10c1be0b3a1ab4dc787c8cdd 284 Pfam PF00665 Integrase core domain 120 235 3.6E-17 T 09-03-2017 IPR001584 Integrase, catalytic core GO:0015074 LS838_RS01065 ea2a3702a95d0dffc618d80f7018f953 159 SUPERFAMILY SSF55804 3 156 8.37E-20 T 09-03-2017 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 LS838_RS01065 ea2a3702a95d0dffc618d80f7018f953 159 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 156 1.6E-18 T 09-03-2017 IPR002178 PTS EIIA type-2 domain LS838_RS01065 ea2a3702a95d0dffc618d80f7018f953 159 Gene3D G3DSA:3.40.930.10 2 156 1.6E-27 T 09-03-2017 IPR002178 PTS EIIA type-2 domain LS838_RS07310 c1c6aeafba901b5a4302b8cbf0ac2140 375 Gene3D G3DSA:3.40.710.10 37 356 1.1E-39 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS07310 c1c6aeafba901b5a4302b8cbf0ac2140 375 Pfam PF00144 Beta-lactamase 52 351 2.2E-26 T 09-03-2017 IPR001466 Beta-lactamase-related LS838_RS07310 c1c6aeafba901b5a4302b8cbf0ac2140 375 SUPERFAMILY SSF56601 39 349 8.35E-47 T 09-03-2017 IPR012338 Beta-lactamase/transpeptidase-like LS838_RS05335 2312ee918bf6e114253ffc86b654b227 286 SUPERFAMILY SSF51735 4 279 3.92E-41 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS05335 2312ee918bf6e114253ffc86b654b227 286 Gene3D G3DSA:3.40.50.720 1 223 1.7E-31 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS05335 2312ee918bf6e114253ffc86b654b227 286 Pfam PF13460 NAD(P)H-binding 7 186 1.8E-17 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS06285 d8fc8bd9ed1a830c857f4cb9d7eecc6f 144 Pfam PF03780 Asp23 family, cell envelope-related function 16 120 1.2E-33 T 09-03-2017 IPR005531 Alkaline shock protein Asp23 LS838_RS08575 e6fbaff5044bd4f1be51e1b29b17a5d8 222 Pfam PF02706 Chain length determinant protein 5 135 4.9E-12 T 09-03-2017 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 LS838_RS05250 2b93b42448eaa80fb3f6f3b0410b31b0 257 Gene3D G3DSA:1.10.3620.10 154 255 6.4E-40 T 09-03-2017 LS838_RS05250 2b93b42448eaa80fb3f6f3b0410b31b0 257 Pfam PF02698 DUF218 domain 58 170 2.6E-6 T 09-03-2017 IPR003848 Domain of unknown function DUF218 LS838_RS05250 2b93b42448eaa80fb3f6f3b0410b31b0 257 Gene3D G3DSA:3.40.50.620 26 153 1.3E-31 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS02260 2f95a67ca1957df34699f21d10f0157d 105 Pfam PF00563 EAL domain 39 104 1.3E-14 T 09-03-2017 IPR001633 EAL domain LS838_RS02260 2f95a67ca1957df34699f21d10f0157d 105 Gene3D G3DSA:3.20.20.450 37 104 1.9E-17 T 09-03-2017 IPR001633 EAL domain LS838_RS02260 2f95a67ca1957df34699f21d10f0157d 105 SUPERFAMILY SSF141868 38 104 9.55E-18 T 09-03-2017 IPR001633 EAL domain LS838_RS06140 a8b26634c8b076ec4554e4e253bd7bb3 333 Pfam PF00005 ABC transporter 29 186 1.8E-28 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS06140 a8b26634c8b076ec4554e4e253bd7bb3 333 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 295 1.3E-12 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LS838_RS06140 a8b26634c8b076ec4554e4e253bd7bb3 333 SUPERFAMILY SSF52540 8 258 3.27E-67 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06140 a8b26634c8b076ec4554e4e253bd7bb3 333 Gene3D G3DSA:3.40.50.300 8 260 3.7E-71 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06140 a8b26634c8b076ec4554e4e253bd7bb3 333 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 322 5.6E-20 T 09-03-2017 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 LS838_RS06140 a8b26634c8b076ec4554e4e253bd7bb3 333 SMART SM00382 37 236 5.2E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS01140 1c318e950821b816ab012814e2c32411 438 Pfam PF01814 Hemerythrin HHE cation binding domain 90 218 2.3E-18 T 09-03-2017 IPR012312 Haemerythrin-like Reactome: R-HSA-390471 LS838_RS01140 1c318e950821b816ab012814e2c32411 438 Gene3D G3DSA:1.20.120.520 87 259 1.7E-54 T 09-03-2017 LS838_RS01140 1c318e950821b816ab012814e2c32411 438 Gene3D G3DSA:1.20.120.520 305 326 1.7E-54 T 09-03-2017 LS838_RS01140 1c318e950821b816ab012814e2c32411 438 Pfam PF13596 PAS domain 324 426 9.6E-20 T 09-03-2017 LS838_RS01140 1c318e950821b816ab012814e2c32411 438 Pfam PF04282 Family of unknown function (DUF438) 12 76 5.0E-20 T 09-03-2017 IPR007380 Domain of unknown function DUF438 LS838_RS01140 1c318e950821b816ab012814e2c32411 438 SUPERFAMILY SSF55785 318 426 9.42E-5 T 09-03-2017 IPR000014 PAS domain LS838_RS01140 1c318e950821b816ab012814e2c32411 438 Gene3D G3DSA:3.30.450.20 327 426 2.3E-4 T 09-03-2017 LS838_RS05365 69c366743e29bf6de73a4b4941838fab 204 Pfam PF09335 SNARE associated Golgi protein 30 161 4.6E-25 T 09-03-2017 IPR032816 SNARE associated Golgi protein LS838_RS03210 e532b3a838f8da4da39a352958255a4c 168 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 21 165 2.1E-32 T 09-03-2017 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 LS838_RS03210 e532b3a838f8da4da39a352958255a4c 168 Pfam PF00430 ATP synthase B/B' CF(0) 18 146 5.1E-29 T 09-03-2017 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 LS838_RS03210 e532b3a838f8da4da39a352958255a4c 168 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 166 12.779 T 09-03-2017 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 LS838_RS04845 011fbb2fc5a5825d511e7deb657bd8e8 216 Gene3D G3DSA:3.40.50.1360 10 139 4.3E-21 T 09-03-2017 LS838_RS04845 011fbb2fc5a5825d511e7deb657bd8e8 216 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 47 201 9.3E-23 T 09-03-2017 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 LS838_RS04845 011fbb2fc5a5825d511e7deb657bd8e8 216 SUPERFAMILY SSF75445 123 192 6.93E-5 T 09-03-2017 LS838_RS04845 011fbb2fc5a5825d511e7deb657bd8e8 216 SUPERFAMILY SSF100950 6 136 1.47E-15 T 09-03-2017 LS838_RS00725 0b7d454c79428831b4670d43b2030cb6 266 Pfam PF09648 YycH protein 36 254 2.8E-57 T 09-03-2017 IPR018604 Regulatory protein YycH-like GO:0016021 LS838_RS07445 d0844b6efe5bc74e018150db62c67f61 189 Pfam PF04542 Sigma-70 region 2 38 96 2.5E-4 T 09-03-2017 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS07445 d0844b6efe5bc74e018150db62c67f61 189 SUPERFAMILY SSF88946 3 113 1.05E-15 T 09-03-2017 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 LS838_RS07445 d0844b6efe5bc74e018150db62c67f61 189 Gene3D G3DSA:1.10.1740.10 3 116 2.1E-12 T 09-03-2017 LS838_RS08535 3703113b36f1fa720818ca23d60a42af 142 Pfam PF04138 GtrA-like protein 19 136 1.4E-24 T 09-03-2017 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 LS838_RS06745 f3143434960eeb46d6188424183cfef6 246 Pfam PF03389 MobA/MobL family 21 245 4.8E-80 T 09-03-2017 IPR005053 MobA/MobL protein LS838_RS09850 4ac48ede587e0312f66875ad54cd82ed 248 SUPERFAMILY SSF52540 8 241 9.0E-78 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09850 4ac48ede587e0312f66875ad54cd82ed 248 Gene3D G3DSA:3.40.50.300 7 243 1.1E-83 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09850 4ac48ede587e0312f66875ad54cd82ed 248 SMART SM00382 32 227 2.9E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS09850 4ac48ede587e0312f66875ad54cd82ed 248 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS09850 4ac48ede587e0312f66875ad54cd82ed 248 Pfam PF00005 ABC transporter 24 171 8.1E-38 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS09850 4ac48ede587e0312f66875ad54cd82ed 248 PIRSF PIRSF039085 3 247 1.1E-108 T 09-03-2017 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 LS838_RS05170 effbd4236731ea84431fa919c2f62d0c 178 Pfam PF03217 Bacterial surface layer protein 42 154 1.7E-26 T 09-03-2017 IPR024968 SLAP domain, Lactobacillus LS838_RS07435 947cf967ad343230ac07b0adc1ee03ee 260 SUPERFAMILY SSF53474 73 225 2.28E-13 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS07435 947cf967ad343230ac07b0adc1ee03ee 260 Pfam PF12695 Alpha/beta hydrolase family 85 244 1.5E-49 T 09-03-2017 IPR029059 Alpha/beta hydrolase fold-5 LS838_RS07435 947cf967ad343230ac07b0adc1ee03ee 260 Gene3D G3DSA:3.40.50.1820 61 205 6.2E-12 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS09390 f6634dddbbf0844e7f12659a672bba8d 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 8 105 5.4E-21 T 09-03-2017 IPR008407 Branched-chain amino acid transport, AzlD LS838_RS01415 cb79795777736a4f316c106d390ec443 420 Gene3D G3DSA:3.30.470.20 222 332 5.2E-13 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LS838_RS01415 cb79795777736a4f316c106d390ec443 420 Gene3D G3DSA:3.30.1490.20 111 210 1.1E-6 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LS838_RS01415 cb79795777736a4f316c106d390ec443 420 SUPERFAMILY SSF56059 117 333 2.12E-22 T 09-03-2017 LS838_RS07210 29d4b91c77ee135ddb6b6c97bbaf173a 290 SUPERFAMILY SSF52540 13 178 2.85E-29 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07210 29d4b91c77ee135ddb6b6c97bbaf173a 290 Gene3D G3DSA:3.40.50.300 13 164 4.5E-41 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS07210 29d4b91c77ee135ddb6b6c97bbaf173a 290 Pfam PF13177 DNA polymerase III, delta subunit 12 165 2.8E-42 T 09-03-2017 LS838_RS05115 6b61fbabfc08fc58008421bf48fd1436 132 SMART SM00226 4 130 5.5E-29 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily LS838_RS05115 6b61fbabfc08fc58008421bf48fd1436 132 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 126 1.2E-18 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily LS838_RS05115 6b61fbabfc08fc58008421bf48fd1436 132 Gene3D G3DSA:3.40.50.270 2 128 2.6E-36 T 09-03-2017 LS838_RS05115 6b61fbabfc08fc58008421bf48fd1436 132 SUPERFAMILY SSF52788 5 127 1.2E-31 T 09-03-2017 IPR023485 Phosphotyrosine protein phosphatase I superfamily LS838_RS07330 c5cb6d7062ed3c6f479a4fbedc7ccd46 260 Pfam PF02424 ApbE family 104 232 2.3E-14 T 09-03-2017 IPR024932 Flavin transferase ApbE GO:0017013 LS838_RS07330 c5cb6d7062ed3c6f479a4fbedc7ccd46 260 Pfam PF02424 ApbE family 17 101 1.3E-7 T 09-03-2017 IPR024932 Flavin transferase ApbE GO:0017013 LS838_RS07330 c5cb6d7062ed3c6f479a4fbedc7ccd46 260 SUPERFAMILY SSF143631 33 246 1.83E-33 T 09-03-2017 IPR003374 ApbE-like domain LS838_RS07215 008f6a03e95bfc89975d922b7d435e8d 108 Gene3D G3DSA:3.30.70.120 1 106 3.8E-16 T 09-03-2017 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal LS838_RS07215 008f6a03e95bfc89975d922b7d435e8d 108 Pfam PF06153 Cyclic-di-AMP receptor 1 108 2.8E-37 T 09-03-2017 IPR010375 Cyclic-di-AMP receptor LS838_RS07215 008f6a03e95bfc89975d922b7d435e8d 108 SUPERFAMILY SSF54913 1 106 1.11E-13 T 09-03-2017 IPR011322 Nitrogen regulatory PII-like, alpha/beta LS838_RS06385 6ea83ccf93558354bf546a517b7e3e50 82 SUPERFAMILY SSF82697 1 79 7.85E-25 T 09-03-2017 LS838_RS06385 6ea83ccf93558354bf546a517b7e3e50 82 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 78 17.534 T 09-03-2017 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 LS838_RS06385 6ea83ccf93558354bf546a517b7e3e50 82 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 11 80 1.0E-15 T 09-03-2017 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 LS838_RS06385 6ea83ccf93558354bf546a517b7e3e50 82 Gene3D G3DSA:3.30.1280.10 1 80 8.6E-28 T 09-03-2017 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 LS838_RS06385 6ea83ccf93558354bf546a517b7e3e50 82 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 3 78 6.8E-19 T 09-03-2017 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 LS838_RS06385 6ea83ccf93558354bf546a517b7e3e50 82 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 4 78 1.5E-24 T 09-03-2017 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 LS838_RS01010 f5145629b0586aa6ba940be17ccf417c 285 Gene3D G3DSA:1.10.3720.10 5 272 2.0E-59 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS01010 f5145629b0586aa6ba940be17ccf417c 285 SUPERFAMILY SSF161098 7 285 4.71E-60 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS01010 f5145629b0586aa6ba940be17ccf417c 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 277 1.0E-18 T 09-03-2017 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 LS838_RS02020 2d9c37b562b7c83ef628dc0b6c1b66b1 207 Pfam PF00293 NUDIX domain 73 183 4.7E-13 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LS838_RS02020 2d9c37b562b7c83ef628dc0b6c1b66b1 207 Gene3D G3DSA:3.90.79.10 56 192 3.2E-29 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LS838_RS02020 2d9c37b562b7c83ef628dc0b6c1b66b1 207 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 7 61 7.7E-25 T 09-03-2017 LS838_RS02020 2d9c37b562b7c83ef628dc0b6c1b66b1 207 SUPERFAMILY SSF55811 60 199 1.27E-32 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LS838_RS03135 4de8c49722053ae398dc1813ead6c2ca 208 Pfam PF04892 VanZ like family 68 197 9.9E-24 T 09-03-2017 IPR006976 VanZ-like LS838_RS01120 d3eefb18e661fe4e93347c7bc2964c73 419 Gene3D G3DSA:3.30.1490.20 110 210 3.5E-6 T 09-03-2017 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 LS838_RS01120 d3eefb18e661fe4e93347c7bc2964c73 419 Gene3D G3DSA:3.30.470.20 223 326 5.2E-11 T 09-03-2017 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 LS838_RS01120 d3eefb18e661fe4e93347c7bc2964c73 419 SUPERFAMILY SSF56059 116 325 6.14E-21 T 09-03-2017 LS838_RS03915 b0a7afa97a983f84428f1ff8a8a5e735 408 Gene3D G3DSA:3.40.50.620 9 176 8.7E-56 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS03915 b0a7afa97a983f84428f1ff8a8a5e735 408 Hamap MF_00005 Argininosuccinate synthase [argG]. 8 405 50.608 T 09-03-2017 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LS838_RS03915 b0a7afa97a983f84428f1ff8a8a5e735 408 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 14 22 - T 09-03-2017 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LS838_RS03915 b0a7afa97a983f84428f1ff8a8a5e735 408 Pfam PF00764 Arginosuccinate synthase 12 399 1.5E-145 T 09-03-2017 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LS838_RS03915 b0a7afa97a983f84428f1ff8a8a5e735 408 Gene3D G3DSA:3.90.1260.10 180 407 1.8E-88 T 09-03-2017 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LS838_RS03915 b0a7afa97a983f84428f1ff8a8a5e735 408 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 122 133 - T 09-03-2017 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LS838_RS03915 b0a7afa97a983f84428f1ff8a8a5e735 408 SUPERFAMILY SSF69864 180 403 4.58E-85 T 09-03-2017 LS838_RS03915 b0a7afa97a983f84428f1ff8a8a5e735 408 TIGRFAM TIGR00032 argG: argininosuccinate synthase 10 401 1.5E-137 T 09-03-2017 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 LS838_RS03915 b0a7afa97a983f84428f1ff8a8a5e735 408 SUPERFAMILY SSF52402 9 171 5.95E-43 T 09-03-2017 LS838_RS06735 a941c1cc2e3e739fc79ce909cb2377a7 109 Gene3D G3DSA:1.20.1250.20 23 106 2.3E-6 T 09-03-2017 LS838_RS06735 a941c1cc2e3e739fc79ce909cb2377a7 109 SUPERFAMILY SSF103473 15 106 6.15E-11 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS09215 797022dffccdbd5e44762eef50841e57 224 Gene3D G3DSA:3.40.50.300 3 222 1.0E-64 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09215 797022dffccdbd5e44762eef50841e57 224 Pfam PF00005 ABC transporter 23 171 1.8E-33 T 09-03-2017 IPR003439 ABC transporter-like GO:0005524|GO:0016887 LS838_RS09215 797022dffccdbd5e44762eef50841e57 224 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 09-03-2017 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 LS838_RS09215 797022dffccdbd5e44762eef50841e57 224 SUPERFAMILY SSF52540 4 222 6.23E-61 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09215 797022dffccdbd5e44762eef50841e57 224 SMART SM00382 32 221 1.0E-15 T 09-03-2017 IPR003593 AAA+ ATPase domain LS838_RS09585 c3ee2f5b95fe71a3cb019a13c8b0b4be 49 Pfam PF12459 D-Ala-teichoic acid biosynthesis protein 11 49 1.1E-18 T 09-03-2017 IPR021008 Protein of unknown function DUF3687 LS838_RS05555 ef4a5e5326fc63b09b16a5c9923c16b5 481 Gene3D G3DSA:3.20.20.80 5 480 4.8E-150 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS05555 ef4a5e5326fc63b09b16a5c9923c16b5 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 442 454 1.9E-15 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LS838_RS05555 ef4a5e5326fc63b09b16a5c9923c16b5 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 309 323 1.9E-15 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LS838_RS05555 ef4a5e5326fc63b09b16a5c9923c16b5 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 417 434 1.9E-15 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LS838_RS05555 ef4a5e5326fc63b09b16a5c9923c16b5 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 395 406 1.9E-15 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LS838_RS05555 ef4a5e5326fc63b09b16a5c9923c16b5 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 375 383 1.9E-15 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LS838_RS05555 ef4a5e5326fc63b09b16a5c9923c16b5 481 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 375 383 - T 09-03-2017 IPR018120 Glycoside hydrolase family 1, active site LS838_RS05555 ef4a5e5326fc63b09b16a5c9923c16b5 481 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 09-03-2017 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site LS838_RS05555 ef4a5e5326fc63b09b16a5c9923c16b5 481 Pfam PF00232 Glycosyl hydrolase family 1 4 477 2.2E-136 T 09-03-2017 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 LS838_RS05555 ef4a5e5326fc63b09b16a5c9923c16b5 481 SUPERFAMILY SSF51445 5 478 9.5E-163 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS08900 08eb82292e5edc81f6f27ec8104b1827 275 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 204 5.3E-22 T 09-03-2017 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 LS838_RS08900 08eb82292e5edc81f6f27ec8104b1827 275 SUPERFAMILY SSF51735 1 272 6.46E-40 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS08900 08eb82292e5edc81f6f27ec8104b1827 275 Gene3D G3DSA:3.40.50.720 1 273 1.4E-25 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS02045 3fd2334d815675f602a2943830ee00d6 351 Pfam PF13303 Phosphotransferase system, EIIC 16 348 2.2E-98 T 09-03-2017 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 LS838_RS08490 c56f84993822d6930c9c5ba8419fc4a9 220 SUPERFAMILY SSF55486 72 217 2.45E-22 T 09-03-2017 LS838_RS08490 c56f84993822d6930c9c5ba8419fc4a9 220 Gene3D G3DSA:3.40.390.10 62 218 2.3E-21 T 09-03-2017 IPR024079 Metallopeptidase, catalytic domain GO:0008237 LS838_RS08490 c56f84993822d6930c9c5ba8419fc4a9 220 Pfam PF00413 Matrixin 87 216 2.6E-8 T 09-03-2017 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 LS838_RS03500 71b01f8548be1653814b0f6e9c4f88f8 388 Pfam PF01098 Cell cycle protein 12 377 3.1E-93 T 09-03-2017 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 LS838_RS03500 71b01f8548be1653814b0f6e9c4f88f8 388 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 334 358 - T 09-03-2017 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 LS838_RS02475 f8545d945e40d5ed55a003d2616f2102 228 SUPERFAMILY SSF51445 48 208 3.79E-10 T 09-03-2017 IPR017853 Glycoside hydrolase superfamily LS838_RS02475 f8545d945e40d5ed55a003d2616f2102 228 Gene3D G3DSA:3.20.20.80 54 219 4.3E-6 T 09-03-2017 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 LS838_RS06145 1f1f5c6446a95740f1bd1f7eaa08d83d 80 Hamap MF_01217 Acyl carrier protein [acpP]. 5 79 19.985 T 09-03-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LS838_RS06145 1f1f5c6446a95740f1bd1f7eaa08d83d 80 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 36 78 1.0E-13 T 09-03-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LS838_RS06145 1f1f5c6446a95740f1bd1f7eaa08d83d 80 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 4 79 7.2E-28 T 09-03-2017 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 LS838_RS06145 1f1f5c6446a95740f1bd1f7eaa08d83d 80 SUPERFAMILY SSF47336 1 79 7.33E-23 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain LS838_RS06145 1f1f5c6446a95740f1bd1f7eaa08d83d 80 Gene3D G3DSA:1.10.1200.10 5 79 1.2E-28 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain LS838_RS06145 1f1f5c6446a95740f1bd1f7eaa08d83d 80 Pfam PF00550 Phosphopantetheine attachment site 8 75 4.6E-14 T 09-03-2017 IPR009081 Phosphopantetheine binding ACP domain LS838_RS05235 efbd9473c93b980e2347fa1e68a94ea1 146 Pfam PF04397 LytTr DNA-binding domain 49 144 7.5E-18 T 09-03-2017 IPR007492 LytTR DNA-binding domain GO:0003677 LS838_RS05235 efbd9473c93b980e2347fa1e68a94ea1 146 SMART SM00850 49 145 9.5E-26 T 09-03-2017 IPR007492 LytTR DNA-binding domain GO:0003677 LS838_RS05235 efbd9473c93b980e2347fa1e68a94ea1 146 Gene3D G3DSA:2.40.50.40 43 106 3.5E-11 T 09-03-2017 LS838_RS03960 0db4f8fab49d2baf9f3abe6a93f323aa 233 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 3 208 7.6E-37 T 09-03-2017 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 LS838_RS03960 0db4f8fab49d2baf9f3abe6a93f323aa 233 TIGRFAM TIGR01868 casD_Cas5e: CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI 3 206 7.2E-37 T 09-03-2017 IPR010147 CRISPR-associated protein, CasD GO:0003723|GO:0051607 LS838_RS03960 0db4f8fab49d2baf9f3abe6a93f323aa 233 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 4 44 5.8E-10 T 09-03-2017 IPR013422 CRISPR-associated protein Cas5, N-terminal LS838_RS00480 4636efaf90ef5be2d64b4ba9c6a7f652 149 Pfam PF14478 Domain of unknown function (DUF4430) 78 147 1.6E-17 T 09-03-2017 IPR027954 Domain of unknown function DUF4430 Reactome: R-HSA-196741 LS838_RS07185 f29ad52be9f7a5caef7fe3987b2f73ec 240 Pfam PF00814 Glycoprotease family 30 130 4.4E-26 T 09-03-2017 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 LS838_RS07185 f29ad52be9f7a5caef7fe3987b2f73ec 240 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 214 1.4E-50 T 09-03-2017 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 LS838_RS07185 f29ad52be9f7a5caef7fe3987b2f73ec 240 SUPERFAMILY SSF53067 109 212 5.7E-7 T 09-03-2017 LS838_RS07185 f29ad52be9f7a5caef7fe3987b2f73ec 240 Gene3D G3DSA:3.30.420.40 1 130 5.5E-36 T 09-03-2017 LS838_RS07185 f29ad52be9f7a5caef7fe3987b2f73ec 240 SUPERFAMILY SSF53067 1 102 1.99E-25 T 09-03-2017 LS838_RS04645 e5f21ff2391ba608caa45a79e6a6ddd5 113 Pfam PF02687 FtsX-like permease family 6 103 2.2E-7 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 LS838_RS04840 14f8f878fc7a535542a8de81ce53a653 328 Gene3D G3DSA:3.40.50.720 1 142 2.4E-46 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS04840 14f8f878fc7a535542a8de81ce53a653 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 5.6E-23 T 09-03-2017 IPR000683 Oxidoreductase, N-terminal GO:0016491 LS838_RS04840 14f8f878fc7a535542a8de81ce53a653 328 SUPERFAMILY SSF51735 3 153 5.87E-48 T 09-03-2017 IPR016040 NAD(P)-binding domain LS838_RS04840 14f8f878fc7a535542a8de81ce53a653 328 Gene3D G3DSA:3.30.360.10 143 327 5.5E-38 T 09-03-2017 LS838_RS04840 14f8f878fc7a535542a8de81ce53a653 328 SUPERFAMILY SSF55347 127 290 1.37E-32 T 09-03-2017 LS838_RS02930 5e72f96ad4e44e778b0f59754ad450fa 329 Pfam PF01515 Phosphate acetyl/butaryl transferase 5 322 9.3E-115 T 09-03-2017 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 LS838_RS02930 5e72f96ad4e44e778b0f59754ad450fa 329 PIRSF PIRSF000428 1 328 3.8E-102 T 09-03-2017 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 LS838_RS02930 5e72f96ad4e44e778b0f59754ad450fa 329 Gene3D G3DSA:3.40.50.10750 142 298 1.4E-62 T 09-03-2017 LS838_RS02930 5e72f96ad4e44e778b0f59754ad450fa 329 SUPERFAMILY SSF53659 2 325 5.35E-92 T 09-03-2017 LS838_RS02930 5e72f96ad4e44e778b0f59754ad450fa 329 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 19 322 5.1E-112 T 09-03-2017 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 LS838_RS00435 6686e9c9924e24bd9d71f146895a0a49 62 Pfam PF02371 Transposase IS116/IS110/IS902 family 20 55 1.2E-9 T 09-03-2017 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 LS838_RS00435 6686e9c9924e24bd9d71f146895a0a49 62 Gene3D G3DSA:1.10.150.20 10 42 1.7E-4 T 09-03-2017 LS838_RS06690 553eec91a6e87831c96e27caff55e50d 444 Pfam PF07261 Replication initiation and membrane attachment 314 385 2.8E-11 T 09-03-2017 IPR006343 Replication protein, DnaD/DnaB domain LS838_RS04360 305489dc9ca0d75e9682115f396dd23c 218 Pfam PF00293 NUDIX domain 59 199 7.1E-8 T 09-03-2017 IPR000086 NUDIX hydrolase domain GO:0016787 LS838_RS04360 305489dc9ca0d75e9682115f396dd23c 218 SUPERFAMILY SSF55811 58 211 2.03E-17 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LS838_RS04360 305489dc9ca0d75e9682115f396dd23c 218 Gene3D G3DSA:3.90.79.10 11 208 3.6E-20 T 09-03-2017 IPR015797 NUDIX hydrolase domain-like GO:0016787 LS838_RS01690 14919ffaa01f27c2f1b80f793e8fc2ec 117 Gene3D G3DSA:2.40.50.140 1 74 1.4E-15 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS01690 14919ffaa01f27c2f1b80f793e8fc2ec 117 SUPERFAMILY SSF50249 1 74 2.54E-13 T 09-03-2017 IPR012340 Nucleic acid-binding, OB-fold LS838_RS01690 14919ffaa01f27c2f1b80f793e8fc2ec 117 Pfam PF00575 S1 RNA binding domain 4 72 1.8E-9 T 09-03-2017 IPR003029 S1 domain GO:0003676 LS838_RS01690 14919ffaa01f27c2f1b80f793e8fc2ec 117 SMART SM00316 4 72 5.1E-10 T 09-03-2017 IPR022967 RNA-binding domain, S1 LS838_RS02700 b55b9e25e76d14cd69db45607abb8e9a 126 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 4 123 4.0E-32 T 09-03-2017 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 LS838_RS02700 b55b9e25e76d14cd69db45607abb8e9a 126 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 3 121 2.4E-28 T 09-03-2017 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 LS838_RS02700 b55b9e25e76d14cd69db45607abb8e9a 126 SUPERFAMILY SSF141530 1 124 1.22E-28 T 09-03-2017 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 LS838_RS02700 b55b9e25e76d14cd69db45607abb8e9a 126 Gene3D G3DSA:2.40.33.40 1 125 2.2E-34 T 09-03-2017 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 LS838_RS02065 e73977324ad670cc0777e9a8651b07d8 370 SUPERFAMILY SSF51126 14 231 1.35E-9 T 09-03-2017 IPR011050 Pectin lyase fold/virulence factor LS838_RS03015 74e9984b75fc97f5834ba9bf04c5f7bf 119 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 4 112 1.7E-19 T 09-03-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 LS838_RS03015 74e9984b75fc97f5834ba9bf04c5f7bf 119 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 2 117 15.038 T 09-03-2017 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 LS838_RS03720 7087d59907a4f6328673064558ca58cd 647 SUPERFAMILY SSF52266 488 641 4.73E-11 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain LS838_RS03720 7087d59907a4f6328673064558ca58cd 647 Pfam PF01757 Acyltransferase family 10 338 2.5E-21 T 09-03-2017 IPR002656 Acyltransferase 3 GO:0016747 LS838_RS03720 7087d59907a4f6328673064558ca58cd 647 Gene3D G3DSA:3.40.50.1110 480 638 1.3E-5 T 09-03-2017 IPR013830 SGNH hydrolase-type esterase domain LS838_RS09220 fa7b65cfd1256a68fbac66945969e1d4 352 Pfam PF02687 FtsX-like permease family 235 346 3.9E-9 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 LS838_RS08410 5c1cdc5cc5dde5a0a4aa09718171cd55 300 Gene3D G3DSA:3.30.420.40 102 297 1.2E-49 T 09-03-2017 LS838_RS08410 5c1cdc5cc5dde5a0a4aa09718171cd55 300 Gene3D G3DSA:3.30.420.40 1 100 1.8E-29 T 09-03-2017 LS838_RS08410 5c1cdc5cc5dde5a0a4aa09718171cd55 300 SUPERFAMILY SSF53067 1 296 2.14E-47 T 09-03-2017 LS838_RS08410 5c1cdc5cc5dde5a0a4aa09718171cd55 300 Pfam PF00480 ROK family 6 292 8.2E-39 T 09-03-2017 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 LS838_RS03485 df7daaff063e18d5a59a5d37a4dcf944 77 ProDom PD055417 UPF0356 TRANSCRIPTIONAL REGULATOR SP0122 SH1862 BLI01669/BL01628 MW0973 LMOF2365_1049 BCE33L3734 SPYM3_1619/SPS0248 1 67 6.0E-30 T 09-03-2017 IPR009907 Protein of unknown function DUF1447 LS838_RS03485 df7daaff063e18d5a59a5d37a4dcf944 77 Hamap MF_01553 UPF0356 protein . 1 70 21.047 T 09-03-2017 IPR009907 Protein of unknown function DUF1447 LS838_RS03485 df7daaff063e18d5a59a5d37a4dcf944 77 Pfam PF07288 Protein of unknown function (DUF1447) 2 68 2.1E-29 T 09-03-2017 IPR009907 Protein of unknown function DUF1447 LS838_RS06605 902fa79bf4305d9db3e10420d0629de5 192 Pfam PF02620 Uncharacterized ACR, COG1399 59 174 2.0E-19 T 09-03-2017 IPR003772 Protein of unknown function DUF177 LS838_RS00380 704d80949b4d250781923197bec23911 168 Pfam PF08876 Domain of unknown function (DUF1836) 14 109 1.2E-26 T 09-03-2017 IPR014975 Protein of unknown function DUF1836 LS838_RS03045 7d5771d11266a0c3b113f88b8ebebfe2 543 Pfam PF13520 Amino acid permease 11 453 6.9E-43 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LS838_RS03045 7d5771d11266a0c3b113f88b8ebebfe2 543 PIRSF PIRSF006060 1 489 2.6E-41 T 09-03-2017 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 LS838_RS05890 c0d7601722d4987b848a9581ff9edbcc 298 SUPERFAMILY SSF55120 2 234 1.53E-75 T 09-03-2017 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS05890 c0d7601722d4987b848a9581ff9edbcc 298 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 2 294 18.192 T 09-03-2017 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS05890 c0d7601722d4987b848a9581ff9edbcc 298 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 237 1.1E-14 T 09-03-2017 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 LS838_RS05890 c0d7601722d4987b848a9581ff9edbcc 298 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 3 219 2.9E-72 T 09-03-2017 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 LS838_RS05890 c0d7601722d4987b848a9581ff9edbcc 298 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 24 180 1.2E-52 T 09-03-2017 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 LS838_RS09725 ecb663a272664b4c567aa4545a1693cf 379 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 337 6.5E-34 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LS838_RS01810 70010894d6c698bf104a4ea5048fdc50 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 237 5.0E-23 T 09-03-2017 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 LS838_RS01810 70010894d6c698bf104a4ea5048fdc50 269 Gene3D G3DSA:3.30.1240.10 88 182 3.5E-18 T 09-03-2017 LS838_RS01810 70010894d6c698bf104a4ea5048fdc50 269 SUPERFAMILY SSF56784 1 268 1.98E-69 T 09-03-2017 IPR023214 HAD-like domain LS838_RS01810 70010894d6c698bf104a4ea5048fdc50 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 264 8.6E-58 T 09-03-2017 IPR000150 Cof protein GO:0016787 LS838_RS01810 70010894d6c698bf104a4ea5048fdc50 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 264 3.3E-63 T 09-03-2017 IPR023214 HAD-like domain LS838_RS01810 70010894d6c698bf104a4ea5048fdc50 269 Gene3D G3DSA:3.40.50.1000 1 75 1.1E-54 T 09-03-2017 IPR023214 HAD-like domain LS838_RS01810 70010894d6c698bf104a4ea5048fdc50 269 Gene3D G3DSA:3.40.50.1000 183 268 1.1E-54 T 09-03-2017 IPR023214 HAD-like domain LS838_RS03840 89293fe59d5335bdaed027e30eca9b9a 234 PIRSF PIRSF037778 8 226 5.9E-35 T 09-03-2017 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 LS838_RS03840 89293fe59d5335bdaed027e30eca9b9a 234 Pfam PF12822 Protein of unknown function (DUF3816) 19 212 2.7E-16 T 09-03-2017 IPR024529 ECF transporter, substrate-specific component GO:0005215 LS838_RS03255 4a81aea8d861e1fd52d907be689f7e2d 75 Pfam PF11184 Protein of unknown function (DUF2969) 1 73 3.8E-22 T 09-03-2017 IPR021351 Protein of unknown function DUF2969 LS838_RS04635 5f565ad2619a23ca778ac8f44dbb9abb 360 Gene3D G3DSA:3.90.1150.10 259 360 1.9E-39 T 09-03-2017 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 LS838_RS04635 5f565ad2619a23ca778ac8f44dbb9abb 360 SUPERFAMILY SSF53383 3 359 1.65E-98 T 09-03-2017 IPR015424 Pyridoxal phosphate-dependent transferase LS838_RS04635 5f565ad2619a23ca778ac8f44dbb9abb 360 PIRSF PIRSF000525 1 360 5.8E-130 T 09-03-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 LS838_RS04635 5f565ad2619a23ca778ac8f44dbb9abb 360 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 360 42.514 T 09-03-2017 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 LS838_RS04635 5f565ad2619a23ca778ac8f44dbb9abb 360 Pfam PF00266 Aminotransferase class-V 4 349 1.6E-48 T 09-03-2017 IPR000192 Aminotransferase class V domain LS838_RS04635 5f565ad2619a23ca778ac8f44dbb9abb 360 Gene3D G3DSA:3.40.640.10 16 257 9.4E-81 T 09-03-2017 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 LS838_RS08355 bd016f1f027d69c331a82c0ab3482f9b 190 SUPERFAMILY SSF46689 8 70 1.54E-10 T 09-03-2017 IPR009057 Homeodomain-like GO:0003677 LS838_RS08355 bd016f1f027d69c331a82c0ab3482f9b 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 55 8.2E-8 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LS838_RS08355 bd016f1f027d69c331a82c0ab3482f9b 190 Gene3D G3DSA:1.10.357.10 2 154 4.6E-24 T 09-03-2017 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 LS838_RS08355 bd016f1f027d69c331a82c0ab3482f9b 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.6E-5 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LS838_RS08355 bd016f1f027d69c331a82c0ab3482f9b 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.6E-5 T 09-03-2017 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 LS838_RS07740 aa14cefc0a6ebfea23b0bac3d3a7a4b4 172 Gene3D G3DSA:3.40.630.30 2 170 3.6E-47 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS07740 aa14cefc0a6ebfea23b0bac3d3a7a4b4 172 Pfam PF00583 Acetyltransferase (GNAT) family 61 146 1.6E-12 T 09-03-2017 IPR000182 GNAT domain GO:0008080 LS838_RS07740 aa14cefc0a6ebfea23b0bac3d3a7a4b4 172 SUPERFAMILY SSF55729 2 153 1.56E-26 T 09-03-2017 IPR016181 Acyl-CoA N-acyltransferase LS838_RS08570 7b09833299e076489628b10f3d3664ff 378 Pfam PF01757 Acyltransferase family 14 354 5.9E-12 T 09-03-2017 IPR002656 Acyltransferase 3 GO:0016747 LS838_RS09250 3c642b767175802d45d88c6345ce9cf8 516 Pfam PF07282 Putative transposase DNA-binding domain 423 490 7.2E-13 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS09635 49651b454b230ff29cb0d45629af84c9 218 Pfam PF02517 CAAX protease self-immunity 127 213 4.6E-16 T 09-03-2017 IPR003675 CAAX amino terminal protease GO:0016020 LS838_RS08820 0e020949d316c6e3620f40dc2fff7f2f 263 SMART SM00530 16 71 8.4E-7 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LS838_RS08820 0e020949d316c6e3620f40dc2fff7f2f 263 Gene3D G3DSA:1.10.260.40 15 104 1.0E-11 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS08820 0e020949d316c6e3620f40dc2fff7f2f 263 SUPERFAMILY SSF47413 11 74 3.94E-9 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS08820 0e020949d316c6e3620f40dc2fff7f2f 263 Pfam PF01381 Helix-turn-helix 23 70 7.3E-8 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LS838_RS08325 dd91cafe93b01c32cf15e3e64b8e28f1 286 Gene3D G3DSA:1.25.40.10 76 259 3.0E-6 T 09-03-2017 IPR011990 Tetratricopeptide-like helical domain GO:0005515 LS838_RS08325 dd91cafe93b01c32cf15e3e64b8e28f1 286 Pfam PF01381 Helix-turn-helix 9 59 2.9E-9 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LS838_RS08325 dd91cafe93b01c32cf15e3e64b8e28f1 286 SMART SM00530 6 60 8.0E-8 T 09-03-2017 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 LS838_RS08325 dd91cafe93b01c32cf15e3e64b8e28f1 286 SUPERFAMILY SSF47413 8 61 4.5E-12 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS08325 dd91cafe93b01c32cf15e3e64b8e28f1 286 Gene3D G3DSA:1.10.260.40 9 61 2.0E-10 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS03390 7080e953e15c7fbd8109a3ec3729c812 281 Hamap MF_00912 Cell division protein DivIB [divIB]. 25 275 27.809 T 09-03-2017 IPR026580 Cell division protein DivIB LS838_RS03390 7080e953e15c7fbd8109a3ec3729c812 281 Pfam PF08478 POTRA domain, FtsQ-type 75 144 1.2E-4 T 09-03-2017 IPR013685 Polypeptide-transport-associated, FtsQ-type LS838_RS00895 ec957220d8b9843ceef6cd0fa036c55c 287 Gene3D G3DSA:3.90.550.10 20 244 6.9E-42 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS00895 ec957220d8b9843ceef6cd0fa036c55c 287 SUPERFAMILY SSF53448 20 252 4.93E-49 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS00895 ec957220d8b9843ceef6cd0fa036c55c 287 Pfam PF00535 Glycosyl transferase family 2 22 149 2.9E-27 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 LS838_RS00765 b7b717229a920da036e04bca9c33b642 222 Pfam PF02361 Cobalt transport protein 13 187 1.1E-14 T 09-03-2017 IPR003339 ABC/ECF transporter, transmembrane component LS838_RS00880 b19fdf52897057fcceff965e4787cde8 314 SUPERFAMILY SSF53474 65 275 8.17E-7 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS00880 b19fdf52897057fcceff965e4787cde8 314 Pfam PF06028 Alpha/beta hydrolase of unknown function (DUF915) 64 305 4.7E-46 T 09-03-2017 IPR010315 Protein of unknown function DUF915, hydrolase-like LS838_RS00880 b19fdf52897057fcceff965e4787cde8 314 Gene3D G3DSA:3.40.50.1820 65 305 3.7E-64 T 09-03-2017 IPR029058 Alpha/Beta hydrolase fold LS838_RS04085 784d62f31aaaea9cb4397c19a79cbcf3 357 Pfam PF01594 Domain of unknown function DUF20 19 332 8.9E-45 T 09-03-2017 IPR002549 Transmembrane protein TqsA-like LS838_RS06575 09fc66ef9d4e6c3a00050effa557f59d 116 Gene3D G3DSA:1.10.10.10 13 115 2.0E-27 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS06575 09fc66ef9d4e6c3a00050effa557f59d 116 Pfam PF01638 HxlR-like helix-turn-helix 30 115 1.4E-21 T 09-03-2017 IPR002577 Helix-turn-helix, HxlR type LS838_RS06575 09fc66ef9d4e6c3a00050effa557f59d 116 SUPERFAMILY SSF46785 17 115 1.39E-22 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS09010 2df642baa257d20774a75cbd4560bce2 251 Pfam PF06738 Putative threonine/serine exporter 7 248 2.8E-75 T 09-03-2017 IPR010619 Putative threonine/serine exporter LS838_RS00185 e9d82c401eb9c379f5465e9acecabf96 142 SUPERFAMILY SSF46785 2 136 2.1E-24 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS00185 e9d82c401eb9c379f5465e9acecabf96 142 Gene3D G3DSA:1.10.10.10 1 138 4.0E-41 T 09-03-2017 IPR011991 Winged helix-turn-helix DNA-binding domain LS838_RS00185 e9d82c401eb9c379f5465e9acecabf96 142 Pfam PF02082 Transcriptional regulator 1 81 8.3E-18 T 09-03-2017 IPR000944 Transcription regulator Rrf2-type LS838_RS09710 1bc9d8a114520cfc4a3c52477de8b0ff 331 ProDom PD133452 BACTERIOCIN J HELVETICIN ANTIBIOTIC ANTIMICROBIAL 22 329 5.0E-77 T 09-03-2017 LS838_RS09115 071fde6832a46010dc2fc400f4130915 256 Pfam PF06570 Protein of unknown function (DUF1129) 39 244 1.6E-61 T 09-03-2017 IPR009214 Protein of unknown function DUF1129 LS838_RS09115 071fde6832a46010dc2fc400f4130915 256 PIRSF PIRSF033111 22 251 1.1E-32 T 09-03-2017 IPR009214 Protein of unknown function DUF1129 LS838_RS03280 d4be1b7e53bd1a93d8aec278b451c499 154 Pfam PF07997 Protein of unknown function (DUF1694) 3 122 4.5E-31 T 09-03-2017 IPR012543 Protein of unknown function DUF1694 LS838_RS03280 d4be1b7e53bd1a93d8aec278b451c499 154 SUPERFAMILY SSF160515 3 130 1.96E-28 T 09-03-2017 LS838_RS03280 d4be1b7e53bd1a93d8aec278b451c499 154 Gene3D G3DSA:3.30.1330.30 1 134 2.9E-37 T 09-03-2017 IPR029064 50S ribosomal protein L30e-like LS838_RS09460 6beec639f65c9c01a15723e7a914a1c5 83 Pfam PF04226 Transglycosylase associated protein 33 77 2.6E-11 T 09-03-2017 IPR007341 Transglycosylase-associated protein GO:0016021 LS838_RS04685 616818d9daeaae0f4ecaef65e9a71713 395 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 281 369 5.1E-9 T 09-03-2017 IPR016772 Uncharacterised conserved protein UCP020408 LS838_RS08595 3266fd66558cb0bb1719f1c1eb3788ec 477 Pfam PF01943 Polysaccharide biosynthesis protein 7 266 1.1E-22 T 09-03-2017 IPR002797 Polysaccharide biosynthesis protein GO:0016020 LS838_RS08595 3266fd66558cb0bb1719f1c1eb3788ec 477 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 326 463 1.4E-19 T 09-03-2017 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain LS838_RS04625 7e21c725f26590c60f6bccb6bcb92193 303 SUPERFAMILY SSF103481 194 294 1.07E-7 T 09-03-2017 LS838_RS04625 7e21c725f26590c60f6bccb6bcb92193 303 SUPERFAMILY SSF103481 44 149 5.75E-11 T 09-03-2017 LS838_RS04625 7e21c725f26590c60f6bccb6bcb92193 303 Pfam PF00892 EamA-like transporter family 160 290 3.1E-11 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LS838_RS04625 7e21c725f26590c60f6bccb6bcb92193 303 Pfam PF00892 EamA-like transporter family 7 146 1.1E-14 T 09-03-2017 IPR000620 EamA domain GO:0016020|GO:0016021 LS838_RS06725 6033ec66c9a8bb599301431c6113f80b 220 SUPERFAMILY SSF103473 6 210 8.11E-24 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS06725 6033ec66c9a8bb599301431c6113f80b 220 Gene3D G3DSA:1.20.1250.20 18 211 3.9E-16 T 09-03-2017 LS838_RS06725 6033ec66c9a8bb599301431c6113f80b 220 Pfam PF07690 Major Facilitator Superfamily 10 164 2.1E-12 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LS838_RS08495 3be51ef8cd64069343178e7f9fcb7fd8 217 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 205 3.6E-30 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LS838_RS08495 3be51ef8cd64069343178e7f9fcb7fd8 217 Gene3D G3DSA:3.40.50.1240 1 214 3.3E-46 T 09-03-2017 IPR029033 Histidine phosphatase superfamily LS838_RS08495 3be51ef8cd64069343178e7f9fcb7fd8 217 SMART SM00855 3 176 1.1E-21 T 09-03-2017 IPR013078 Histidine phosphatase superfamily, clade-1 LS838_RS08495 3be51ef8cd64069343178e7f9fcb7fd8 217 SUPERFAMILY SSF53254 1 213 7.07E-47 T 09-03-2017 IPR029033 Histidine phosphatase superfamily LS838_RS02365 7801535b694607333406b1b833f9aa33 208 TIGRFAM TIGR00235 udk: uridine kinase 1 206 4.1E-83 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LS838_RS02365 7801535b694607333406b1b833f9aa33 208 Gene3D G3DSA:3.40.50.300 3 198 9.0E-69 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02365 7801535b694607333406b1b833f9aa33 208 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 8 193 3.7E-48 T 09-03-2017 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 LS838_RS02365 7801535b694607333406b1b833f9aa33 208 Hamap MF_00551 Uridine kinase [udk]. 3 207 39.017 T 09-03-2017 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LS838_RS02365 7801535b694607333406b1b833f9aa33 208 PRINTS PR00988 Uridine kinase signature 81 96 2.6E-34 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LS838_RS02365 7801535b694607333406b1b833f9aa33 208 PRINTS PR00988 Uridine kinase signature 36 47 2.6E-34 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LS838_RS02365 7801535b694607333406b1b833f9aa33 208 PRINTS PR00988 Uridine kinase signature 6 23 2.6E-34 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LS838_RS02365 7801535b694607333406b1b833f9aa33 208 PRINTS PR00988 Uridine kinase signature 137 147 2.6E-34 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LS838_RS02365 7801535b694607333406b1b833f9aa33 208 PRINTS PR00988 Uridine kinase signature 151 162 2.6E-34 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LS838_RS02365 7801535b694607333406b1b833f9aa33 208 PRINTS PR00988 Uridine kinase signature 173 186 2.6E-34 T 09-03-2017 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 LS838_RS02365 7801535b694607333406b1b833f9aa33 208 SUPERFAMILY SSF52540 3 199 1.55E-52 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS09730 28e19dd237a4450041dac75f0a35775f 318 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 297 7.4E-39 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LS838_RS07400 b985ebef7abfa52135eedef150cc53ba 334 SUPERFAMILY SSF53448 5 227 6.82E-42 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS07400 b985ebef7abfa52135eedef150cc53ba 334 Pfam PF00535 Glycosyl transferase family 2 7 170 2.8E-30 T 09-03-2017 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 LS838_RS07400 b985ebef7abfa52135eedef150cc53ba 334 Gene3D G3DSA:3.90.550.10 3 203 2.6E-42 T 09-03-2017 IPR029044 Nucleotide-diphospho-sugar transferases LS838_RS09210 f58b692f26fc3eef3f0882cf0dd883e0 460 Pfam PF01385 Probable transposase 208 331 1.4E-13 T 09-03-2017 IPR001959 Probable transposase, IS891/IS1136/IS1341 LS838_RS09210 f58b692f26fc3eef3f0882cf0dd883e0 460 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 299 378 1.7E-19 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS09210 f58b692f26fc3eef3f0882cf0dd883e0 460 Pfam PF07282 Putative transposase DNA-binding domain 351 435 1.7E-7 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS02775 71d60493cb1246952172fb428b73a2e1 228 SUPERFAMILY SSF53271 59 218 3.83E-10 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS02775 71d60493cb1246952172fb428b73a2e1 228 Gene3D G3DSA:3.40.50.2020 63 218 1.6E-7 T 09-03-2017 IPR029057 Phosphoribosyltransferase-like LS838_RS06345 aa76fcd7e546f3297609f9a651d8a34a 397 Gene3D G3DSA:3.40.50.2300 39 247 1.9E-53 T 09-03-2017 LS838_RS06345 aa76fcd7e546f3297609f9a651d8a34a 397 SUPERFAMILY SSF53822 40 392 9.26E-87 T 09-03-2017 IPR028082 Periplasmic binding protein-like I LS838_RS06345 aa76fcd7e546f3297609f9a651d8a34a 397 Pfam PF13458 Periplasmic binding protein 40 389 4.7E-58 T 09-03-2017 IPR028081 Leucine-binding protein domain LS838_RS09675 e5327f748b44386b5bb48a87442b2fc4 136 Gene3D G3DSA:1.10.260.40 28 84 1.4E-4 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS08020 54003940f765352d56e8cb5091b23b24 459 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 8 453 6.0E-115 T 09-03-2017 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 LS838_RS08020 54003940f765352d56e8cb5091b23b24 459 Pfam PF03553 Na+/H+ antiporter family 157 449 2.1E-49 T 09-03-2017 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 LS838_RS00070 e1c93a8daaa42fd33ab1af45729c683d 136 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 1 67 4.1E-12 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS00070 e1c93a8daaa42fd33ab1af45729c683d 136 Pfam PF07282 Putative transposase DNA-binding domain 40 124 7.4E-11 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS07190 2ab30bae5e051a3e5277e5e38a9e70c0 176 Pfam PF12822 Protein of unknown function (DUF3816) 14 163 1.1E-12 T 09-03-2017 IPR024529 ECF transporter, substrate-specific component GO:0005215 LS838_RS07190 2ab30bae5e051a3e5277e5e38a9e70c0 176 TIGRFAM TIGR04518 ECF_S_folT_fam: ECF transporter S component, folate family 11 167 5.5E-33 T 09-03-2017 IPR030949 ECF transporter S component, folate family LS838_RS04155 c8e9537d8a989b71857c63fff698edd9 206 Pfam PF12978 Domain of Unknown Function with PDB structure (DUF3862) 56 202 2.3E-16 T 09-03-2017 IPR024418 Protein of unknown function DUF3862 LS838_RS08585 f4c91349c40c7bc4fc5ca4b45390cb52 154 Gene3D G3DSA:3.40.50.620 1 128 1.2E-35 T 09-03-2017 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold LS838_RS08585 f4c91349c40c7bc4fc5ca4b45390cb52 154 Pfam PF01467 Cytidylyltransferase-like 5 125 1.4E-23 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LS838_RS08585 f4c91349c40c7bc4fc5ca4b45390cb52 154 TIGRFAM TIGR01518 g3p_cytidyltrns: glycerol-3-phosphate cytidylyltransferase 4 128 4.5E-63 T 09-03-2017 IPR006409 Glycerol-3-phosphate cytidylyltransferase GO:0005737|GO:0019350|GO:0046872|GO:0047348 KEGG: 00564+2.7.7.39 LS838_RS08585 f4c91349c40c7bc4fc5ca4b45390cb52 154 SUPERFAMILY SSF52374 2 150 2.95E-34 T 09-03-2017 LS838_RS08585 f4c91349c40c7bc4fc5ca4b45390cb52 154 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 68 1.0E-21 T 09-03-2017 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 LS838_RS00305 ed778181542bf163bc005f18323e67b3 443 SUPERFAMILY SSF158911 142 220 6.28E-8 T 09-03-2017 LS838_RS08505 cf224fbb822328acf5ef9ba6b314d1b9 509 SUPERFAMILY SSF49265 437 506 1.53E-5 T 09-03-2017 IPR003961 Fibronectin type III GO:0005515 LS838_RS08505 cf224fbb822328acf5ef9ba6b314d1b9 509 Gene3D G3DSA:2.60.40.10 443 509 9.5E-8 T 09-03-2017 IPR013783 Immunoglobulin-like fold LS838_RS00720 7eb9125b671ff57d7e3ae67152616b83 517 Pfam PF07435 YycH protein 21 431 3.3E-26 T 09-03-2017 IPR009996 Regulatory protein YycH LS838_RS09155 6c0330fa2a64e7d78f974fc16c9366f1 319 SUPERFAMILY SSF143631 13 311 9.94E-75 T 09-03-2017 IPR003374 ApbE-like domain LS838_RS09155 6c0330fa2a64e7d78f974fc16c9366f1 319 Pfam PF02424 ApbE family 19 297 3.3E-62 T 09-03-2017 IPR024932 Flavin transferase ApbE GO:0017013 LS838_RS09155 6c0330fa2a64e7d78f974fc16c9366f1 319 PIRSF PIRSF006268 5 317 1.4E-82 T 09-03-2017 IPR024932 Flavin transferase ApbE GO:0017013 LS838_RS07550 524f6d63019eebf82a358a82575106ea 68 Gene3D G3DSA:3.40.350.10 2 58 3.5E-12 T 09-03-2017 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal LS838_RS07550 524f6d63019eebf82a358a82575106ea 68 Pfam PF01321 Creatinase/Prolidase N-terminal domain 2 55 5.3E-9 T 09-03-2017 IPR000587 Creatinase, N-terminal GO:0016787 LS838_RS07550 524f6d63019eebf82a358a82575106ea 68 SUPERFAMILY SSF53092 2 57 7.5E-11 T 09-03-2017 IPR028980 Creatinase/Aminopeptidase P, N-terminal LS838_RS06335 e76e5f95c8b636e129441a26b3cf540e 324 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 288 4.5E-45 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LS838_RS09280 c0f7c502596efecba3b6b6b0e3eceb30 510 Pfam PF03577 Peptidase family C69 24 416 1.4E-121 T 09-03-2017 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 LS838_RS01230 1e8a33ac46e933d1c92fc9ccc9912ae3 1000 Pfam PF00884 Sulfatase 647 917 1.2E-16 T 09-03-2017 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 LS838_RS01230 1e8a33ac46e933d1c92fc9ccc9912ae3 1000 SUPERFAMILY SSF53649 760 871 4.25E-5 T 09-03-2017 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 LS838_RS03505 81bc4ad1ad3f4f1246f5916e2ce47926 113 Pfam PF09902 Uncharacterized protein conserved in bacteria (DUF2129) 15 84 5.5E-25 T 09-03-2017 IPR016979 Protein of unknown function DUF2129 LS838_RS03335 d6bb546e2bef9bbab23b19c53bbae342 283 Pfam PF04085 rod shape-determining protein MreC 126 278 1.6E-36 T 09-03-2017 IPR007221 Rod shape-determining protein MreC GO:0008360 LS838_RS03335 d6bb546e2bef9bbab23b19c53bbae342 283 PIRSF PIRSF038471 1 283 1.3E-69 T 09-03-2017 IPR007221 Rod shape-determining protein MreC GO:0008360 LS838_RS03335 d6bb546e2bef9bbab23b19c53bbae342 283 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 55 280 6.2E-38 T 09-03-2017 IPR007221 Rod shape-determining protein MreC GO:0008360 LS838_RS09195 842d66500ab24044d028098fd43fc71a 130 SUPERFAMILY SSF50475 8 128 4.05E-23 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 LS838_RS09195 842d66500ab24044d028098fd43fc71a 130 Gene3D G3DSA:2.30.110.10 8 129 3.2E-41 T 09-03-2017 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 LS838_RS08920 15305034daa539cbd54759c55fbc2202 295 Pfam PF02706 Chain length determinant protein 12 191 1.0E-16 T 09-03-2017 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 LS838_RS05395 810a3245379e1887556754e030ca3077 278 SUPERFAMILY SSF56349 15 226 1.1E-13 T 09-03-2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 LS838_RS05395 810a3245379e1887556754e030ca3077 278 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 16 88 3.7E-6 T 09-03-2017 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 LS838_RS05395 810a3245379e1887556754e030ca3077 278 Gene3D G3DSA:1.10.150.130 6 92 2.0E-7 T 09-03-2017 IPR023109 Integrase/recombinase, N-terminal LS838_RS06835 aec64936bd817622cd5c18da95225952 808 SUPERFAMILY SSF52540 698 794 1.12E-19 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06835 aec64936bd817622cd5c18da95225952 808 SUPERFAMILY SSF52540 1 157 1.12E-19 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS06835 aec64936bd817622cd5c18da95225952 808 Gene3D G3DSA:3.40.1140.10 722 790 3.2E-22 T 09-03-2017 LS838_RS06835 aec64936bd817622cd5c18da95225952 808 Gene3D G3DSA:3.40.1140.10 1 87 3.2E-22 T 09-03-2017 LS838_RS06835 aec64936bd817622cd5c18da95225952 808 Pfam PF13514 AAA domain 1 205 1.1E-17 T 09-03-2017 LS838_RS03450 210b2897b2ef922bb9ad59a7119d5aeb 113 Gene3D G3DSA:3.30.1820.10 1 110 6.4E-40 T 09-03-2017 IPR014965 Putative amino acid metabolism LS838_RS03450 210b2897b2ef922bb9ad59a7119d5aeb 113 SUPERFAMILY SSF160800 1 110 3.27E-40 T 09-03-2017 IPR014965 Putative amino acid metabolism LS838_RS03450 210b2897b2ef922bb9ad59a7119d5aeb 113 Pfam PF08866 Putative amino acid metabolism 2 108 1.7E-38 T 09-03-2017 IPR014965 Putative amino acid metabolism LS838_RS05485 d182f919749c3a985d7568b54a8dd4cd 186 Pfam PF08747 Domain of unknown function (DUF1788) 67 185 1.3E-37 T 09-03-2017 IPR014858 Protein of unknown function DUF1788 LS838_RS01490 873f2f02a83ef53f72bda8819029424e 425 Pfam PF14501 GHKL domain 312 419 1.2E-12 T 09-03-2017 IPR032834 Sensor histidine kinase NatK, C-terminal domain LS838_RS01490 873f2f02a83ef53f72bda8819029424e 425 Gene3D G3DSA:1.10.287.130 200 257 4.7E-4 T 09-03-2017 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 LS838_RS05130 49a9ae5b1638efc168d356d19e25c3f1 624 Pfam PF02687 FtsX-like permease family 64 183 5.9E-11 T 09-03-2017 IPR003838 ABC transporter permease protein domain GO:0016020 LS838_RS05130 49a9ae5b1638efc168d356d19e25c3f1 624 PIRSF PIRSF018968 1 621 1.2E-65 T 09-03-2017 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 LS838_RS01590 d5708a8020b15ed0549e37e703d9679b 83 Gene3D G3DSA:2.30.30.100 4 77 4.1E-29 T 09-03-2017 LS838_RS01590 d5708a8020b15ed0549e37e703d9679b 83 Pfam PF06257 Biofilm formation stimulator VEG 4 74 7.9E-28 T 09-03-2017 IPR009366 Protein Veg GO:0042710 LS838_RS01590 d5708a8020b15ed0549e37e703d9679b 83 PIRSF PIRSF037257 2 83 1.7E-32 T 09-03-2017 IPR009366 Protein Veg GO:0042710 LS838_RS00940 32718935b49d0bdc59317dbaaae55036 369 Pfam PF07907 YibE/F-like protein 123 355 5.4E-57 T 09-03-2017 IPR012507 YibE/F-like LS838_RS04165 b1310d84dfdef6a2c33fa84c64a3e633 140 SUPERFAMILY SSF88713 5 84 2.05E-5 T 09-03-2017 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 LS838_RS04165 b1310d84dfdef6a2c33fa84c64a3e633 140 Gene3D G3DSA:3.20.20.370 6 80 7.5E-5 T 09-03-2017 IPR002509 NodB homology domain GO:0005975|GO:0016810 LS838_RS01435 28e93f9d64f2d3568dd84ccadec9fafa 153 Gene3D G3DSA:3.90.960.10 3 151 5.6E-38 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LS838_RS01435 28e93f9d64f2d3568dd84ccadec9fafa 153 SUPERFAMILY SSF55826 13 146 8.5E-32 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LS838_RS01435 28e93f9d64f2d3568dd84ccadec9fafa 153 Pfam PF04073 Aminoacyl-tRNA editing domain 23 139 5.1E-24 T 09-03-2017 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 LS838_RS00555 2abffe898049a874520d65bf5788557c 374 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 9 67 2.7E-5 T 09-03-2017 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 LS838_RS00555 2abffe898049a874520d65bf5788557c 374 SUPERFAMILY SSF51726 7 371 1.15E-75 T 09-03-2017 LS838_RS00555 2abffe898049a874520d65bf5788557c 374 Gene3D G3DSA:3.20.20.210 5 372 7.0E-110 T 09-03-2017 LS838_RS05245 6921f148ea6a4d98635733cfe3843376 222 Pfam PF04237 YjbR 114 214 2.3E-13 T 09-03-2017 IPR007351 Uncharacterised protein YjbR LS838_RS05245 6921f148ea6a4d98635733cfe3843376 222 SUPERFAMILY SSF142906 98 220 3.14E-27 T 09-03-2017 LS838_RS05230 1962e55142c1a2cf87dd65abb0d643f6 144 Gene3D G3DSA:1.20.1250.20 12 133 7.0E-5 T 09-03-2017 LS838_RS05230 1962e55142c1a2cf87dd65abb0d643f6 144 Pfam PF11457 Protein of unknown function (DUF3021) 6 139 9.1E-25 T 09-03-2017 IPR021560 Protein of unknown function DUF3021 LS838_RS05230 1962e55142c1a2cf87dd65abb0d643f6 144 SUPERFAMILY SSF103473 41 130 4.58E-5 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS05665 695e5d49158fc16a26f9b774eb06cdd9 81 Pfam PF08428 Rib/alpha-like repeat 4 55 3.7E-7 T 09-03-2017 IPR012706 Rib/alpha/Esp surface antigen LS838_RS02875 a48f83c276e2037f19aff9b520fc8700 298 Pfam PF02653 Branched-chain amino acid transport system / permease component 4 270 6.9E-29 T 09-03-2017 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 LS838_RS05610 fea559854a8168fc57093e5fff79b3f2 315 Gene3D G3DSA:3.40.50.300 107 311 1.3E-84 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS05610 fea559854a8168fc57093e5fff79b3f2 315 Pfam PF02562 PhoH-like protein 108 311 1.6E-93 T 09-03-2017 IPR003714 PhoH-like protein GO:0005524 LS838_RS05610 fea559854a8168fc57093e5fff79b3f2 315 SUPERFAMILY SSF52540 107 283 2.06E-35 T 09-03-2017 IPR027417 P-loop containing nucleoside triphosphate hydrolase LS838_RS02830 7374438f083836742028e0a55437343a 180 Pfam PF03729 Short repeat of unknown function (DUF308) 137 178 5.6E-6 T 09-03-2017 IPR005325 Protein of unknown function DUF308, membrane LS838_RS02830 7374438f083836742028e0a55437343a 180 Pfam PF03729 Short repeat of unknown function (DUF308) 75 147 7.4E-6 T 09-03-2017 IPR005325 Protein of unknown function DUF308, membrane LS838_RS02830 7374438f083836742028e0a55437343a 180 Pfam PF03729 Short repeat of unknown function (DUF308) 18 88 5.0E-8 T 09-03-2017 IPR005325 Protein of unknown function DUF308, membrane LS838_RS08905 74df81a1b49d93c3dc18c641c11c4de5 222 Pfam PF02397 Bacterial sugar transferase 27 214 5.4E-58 T 09-03-2017 IPR003362 Bacterial sugar transferase LS838_RS08625 0c5f9d166e9232546b04daae862d56a6 217 Pfam PF02397 Bacterial sugar transferase 21 211 9.7E-57 T 09-03-2017 IPR003362 Bacterial sugar transferase LS838_RS05825 e058a4a87df6363f976b8917877f1bf7 377 Pfam PF01594 Domain of unknown function DUF20 41 358 9.5E-45 T 09-03-2017 IPR002549 Transmembrane protein TqsA-like LS838_RS04495 1f7140bf159dad478d0f961a90d1086d 164 SUPERFAMILY SSF54403 101 161 5.02E-16 T 09-03-2017 LS838_RS04495 1f7140bf159dad478d0f961a90d1086d 164 Gene3D G3DSA:3.10.450.40 101 159 2.0E-20 T 09-03-2017 LS838_RS08540 61966a39f7c499aafd41461ea5c499b8 149 Pfam PF04892 VanZ like family 16 139 3.9E-14 T 09-03-2017 IPR006976 VanZ-like LS838_RS07265 dad4705d62926488ed959c81b9dad5ac 955 SUPERFAMILY SSF56672 556 684 3.37E-5 T 09-03-2017 LS838_RS07265 dad4705d62926488ed959c81b9dad5ac 955 SUPERFAMILY SSF53098 122 268 8.18E-6 T 09-03-2017 IPR012337 Ribonuclease H-like domain GO:0003676 LS838_RS05660 2fd1ae6c3b4199f3f2eb29c170b656f4 61 Pfam PF08428 Rib/alpha-like repeat 2 41 1.2E-7 T 09-03-2017 IPR012706 Rib/alpha/Esp surface antigen LS838_RS08590 fecfa8c17906e05f2ede89d3ce5c21ce 303 Pfam PF04991 LicD family 45 275 2.5E-59 T 09-03-2017 IPR007074 LicD family LS838_RS09005 ec309c7588583701fb4ea5e28f70fa82 163 Pfam PF12821 Threonine/Serine exporter, ThrE 17 143 3.8E-40 T 09-03-2017 IPR024528 Threonine/Serine exporter, ThrE LS838_RS07565 a5e1c498270ce4c2d5cd626bcaf06dd7 167 Pfam PF07155 ECF-type riboflavin transporter, S component 5 153 3.0E-29 T 09-03-2017 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 LS838_RS07535 8bc58db1526c3a35b67f41cab486e5e2 400 SUPERFAMILY SSF103473 22 394 9.94E-35 T 09-03-2017 IPR020846 Major facilitator superfamily domain LS838_RS07535 8bc58db1526c3a35b67f41cab486e5e2 400 Pfam PF07690 Major Facilitator Superfamily 55 350 5.6E-19 T 09-03-2017 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 LS838_RS07535 8bc58db1526c3a35b67f41cab486e5e2 400 Gene3D G3DSA:1.20.1250.20 217 392 1.9E-4 T 09-03-2017 LS838_RS07535 8bc58db1526c3a35b67f41cab486e5e2 400 Gene3D G3DSA:1.20.1250.20 18 187 3.2E-14 T 09-03-2017 LS838_RS03945 88d6f0e9fb8d0460750753dbc83b2eae 574 Pfam PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) 5 521 8.5E-98 T 09-03-2017 IPR013381 CRISPR-associated protein Cse1 LS838_RS09630 8b1a904fffb4ca554e52212e5b1ac2ee 386 Pfam PF00999 Sodium/hydrogen exchanger family 9 378 1.2E-69 T 09-03-2017 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 LS838_RS08675 6fb97ea70e2aac499d4969f7423b419c 103 Gene3D G3DSA:3.30.450.20 5 100 3.3E-6 T 09-03-2017 LS838_RS08675 6fb97ea70e2aac499d4969f7423b419c 103 SUPERFAMILY SSF55785 9 98 7.99E-5 T 09-03-2017 IPR000014 PAS domain LS838_RS06165 04eba02df441bbafa33c8b3b5be7a915 120 Pfam PF03780 Asp23 family, cell envelope-related function 9 116 2.0E-31 T 09-03-2017 IPR005531 Alkaline shock protein Asp23 LS838_RS03955 179296421eb709e5ed5fa8845570b83f 358 TIGRFAM TIGR01869 casC_Cse4: CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI 6 305 3.0E-84 T 09-03-2017 IPR010148 CRISPR-associated protein, CT1975 LS838_RS03955 179296421eb709e5ed5fa8845570b83f 358 Pfam PF09344 CT1975-like protein 7 338 1.1E-117 T 09-03-2017 IPR010148 CRISPR-associated protein, CT1975 LS838_RS09370 f5059ec99feac4991755e21a46386f9d 78 Gene3D G3DSA:1.10.260.40 5 64 7.5E-5 T 09-03-2017 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 LS838_RS07930 74ef5fe7f3c55a756efe61250a7bc64d 128 Pfam PF06803 Protein of unknown function (DUF1232) 32 68 3.0E-14 T 09-03-2017 IPR010652 Protein of unknown function DUF1232 LS838_RS07890 0cb6f7b955c8a3fbefff20aa288e818b 516 Pfam PF07282 Putative transposase DNA-binding domain 423 490 4.3E-13 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS01540 d2b7a07e6b2cc7ab97c661c7f1ae761a 222 Pfam PF02517 CAAX protease self-immunity 122 211 3.8E-8 T 09-03-2017 IPR003675 CAAX amino terminal protease GO:0016020 LS838_RS03875 066c89148abeebd8c2196a678d30b937 951 Pfam PF09586 Bacterial membrane protein YfhO 22 922 1.1E-115 T 09-03-2017 IPR018580 Uncharacterised protein family YfhO LS838_RS09355 9bd712c311084951d8f33975b8145941 516 Pfam PF07282 Putative transposase DNA-binding domain 423 490 4.2E-14 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS07865 b0975f4fb55a30e475f2114decf13947 516 Pfam PF07282 Putative transposase DNA-binding domain 423 490 4.2E-14 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS03365 1d63a2ef9b6a05c7d09f1c37e4f61a97 118 Hamap MF_00910 Cell division protein FtsL [ftsL]. 34 118 13.466 T 09-03-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 LS838_RS03365 1d63a2ef9b6a05c7d09f1c37e4f61a97 118 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 36 117 5.4E-20 T 09-03-2017 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 LS838_RS04895 a5454968eccd02e7cbcc60929edaa38b 380 Pfam PF01554 MatE 26 140 6.5E-10 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 LS838_RS04895 a5454968eccd02e7cbcc60929edaa38b 380 Pfam PF01554 MatE 183 340 4.3E-24 T 09-03-2017 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 LS838_RS04375 56ee7dc117e5417b4b51c3dc88222471 516 Pfam PF03606 C4-dicarboxylate anaerobic carrier 17 509 5.4E-120 T 09-03-2017 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 LS838_RS02275 859bae520eec92fff920367355cf8568 118 Pfam PF06993 Protein of unknown function (DUF1304) 11 115 9.0E-30 T 09-03-2017 IPR009732 Protein of unknown function DUF1304 LS838_RS07275 722e2a223436ae2a410077221104ed7b 403 Pfam PF03217 Bacterial surface layer protein 287 401 9.3E-25 T 09-03-2017 IPR024968 SLAP domain, Lactobacillus LS838_RS07275 722e2a223436ae2a410077221104ed7b 403 Pfam PF03217 Bacterial surface layer protein 168 279 2.2E-18 T 09-03-2017 IPR024968 SLAP domain, Lactobacillus LS838_RS04390 9f4926045bbdc7af8707354e2d141615 258 Pfam PF02361 Cobalt transport protein 13 218 4.4E-20 T 09-03-2017 IPR003339 ABC/ECF transporter, transmembrane component LS838_RS02185 b1da4ee4dbf3ee451827473182f2cc35 237 Pfam PF06736 Protein of unknown function (DUF1211) 48 130 1.2E-15 T 09-03-2017 IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267 LS838_RS01180 c5ccd2ee1063a6244f43526a1fe1afd6 78 Pfam PF11148 Protein of unknown function (DUF2922) 7 70 8.2E-16 T 09-03-2017 IPR021321 Protein of unknown function DUF2922 LS838_RS07010 89561083f0ad54f26f662b33f54f70df 219 Pfam PF09335 SNARE associated Golgi protein 45 173 4.1E-20 T 09-03-2017 IPR032816 SNARE associated Golgi protein LS838_RS09415 ef8f15c1cd5e0dd9ba956c7a5cf48a4c 516 Pfam PF07282 Putative transposase DNA-binding domain 423 489 6.6E-13 T 09-03-2017 IPR010095 Transposase IS605, OrfB, C-terminal LS838_RS07790 9551d443c89d0fb76ce8b47151f61289 297 TIGRFAM TIGR04320 Surf_Exclu_PgrA: SEC10/PgrA surface exclusion domain 28 281 5.9E-27 T 09-03-2017 IPR027607 SEC10/PgrA surface exclusion domain LS838_RS02340 505cfe009afa3517fcaef992dfc05110 237 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 21 230 1.7E-45 T 09-03-2017