locus-tag class description DNA52_RS00065 PF12464 Maltose acetyltransferase DNA52_RS00065 PF00132 Bacterial transferase hexapeptide (six repeats) DNA52_RS00080 PF02311 AraC-like ligand binding domain DNA52_RS00080 PF12833 Helix-turn-helix domain DNA52_RS00090 PF05525 Branched-chain amino acid transport protein DNA52_RS00095 PF00999 Sodium/hydrogen exchanger family DNA52_RS00135 PF00535 Glycosyl transferase family 2 DNA52_RS00160 PF00072 Response regulator receiver domain DNA52_RS00160 PF04397 LytTr DNA-binding domain DNA52_RS00185 PF03412 Peptidase C39 family DNA52_RS00185 PF00005 ABC transporter DNA52_RS00185 PF00664 ABC transporter transmembrane region DNA52_RS00220 PF13538 UvrD-like helicase C-terminal domain DNA52_RS00225 PF00795 Carbon-nitrogen hydrolase DNA52_RS00230 PF00579 tRNA synthetases class I (W and Y) DNA52_RS00235 PF07702 UTRA domain DNA52_RS00235 PF00392 Bacterial regulatory proteins, gntR family DNA52_RS00240 PF02378 Phosphotransferase system, EIIC DNA52_RS00255 PF02378 Phosphotransferase system, EIIC DNA52_RS00260 PF00232 Glycosyl hydrolase family 1 DNA52_RS00265 PF00480 ROK family DNA52_RS00270 PF01380 SIS domain DNA52_RS00270 PF01418 Helix-turn-helix domain, rpiR family DNA52_RS00275 PF01207 Dihydrouridine synthase (Dus) DNA52_RS00290 PF02541 Ppx/GppA phosphatase family DNA52_RS00295 PF00368 Hydroxymethylglutaryl-coenzyme A reductase DNA52_RS00305 PF02146 Sir2 family DNA52_RS00310 PF01904 Protein of unknown function DUF72 DNA52_RS00320 PF08264 Anticodon-binding domain of tRNA DNA52_RS00320 PF01588 Putative tRNA binding domain DNA52_RS00320 PF09334 tRNA synthetases class I (M) DNA52_RS00325 PF07690 Major Facilitator Superfamily DNA52_RS00330 PF01026 TatD related DNase DNA52_RS00335 PF13331 Domain of unknown function (DUF4093) DNA52_RS00340 PF00398 Ribosomal RNA adenine dimethylase DNA52_RS00345 PF06257 Biofilm formation stimulator VEG DNA52_RS00350 PF08544 GHMP kinases C terminal DNA52_RS00350 PF00288 GHMP kinases N terminal domain DNA52_RS00360 PF12146 Serine aminopeptidase, S33 DNA52_RS00365 PF00005 ABC transporter DNA52_RS00370 PF00950 ABC 3 transport family DNA52_RS00390 PF00156 Phosphoribosyl transferase domain DNA52_RS00390 PF09182 Bacterial purine repressor, N-terminal DNA52_RS00395 PF00132 Bacterial transferase hexapeptide (six repeats) DNA52_RS00395 PF00483 Nucleotidyl transferase DNA52_RS00405 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DNA52_RS00405 PF14572 Phosphoribosyl synthetase-associated domain DNA52_RS00425 PF01966 HD domain DNA52_RS00430 PF03099 Biotin/lipoate A/B protein ligase family DNA52_RS00440 PF05066 HB1, ASXL, restriction endonuclease HTH domain DNA52_RS00445 PF06418 CTP synthase N-terminus DNA52_RS00445 PF00117 Glutamine amidotransferase class-I DNA52_RS00450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DNA52_RS00450 PF02403 Seryl-tRNA synthetase N-terminal domain DNA52_RS00465 PF03315 Serine dehydratase beta chain DNA52_RS00465 PF01842 ACT domain DNA52_RS00470 PF03313 Serine dehydratase alpha chain DNA52_RS00485 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DNA52_RS00490 PF07497 Rho termination factor, RNA-binding domain DNA52_RS00490 PF07498 Rho termination factor, N-terminal domain DNA52_RS00490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DNA52_RS00495 PF01197 Ribosomal protein L31 DNA52_RS00505 PF04203 Sortase domain DNA52_RS00510 PF04011 LemA family DNA52_RS00515 PF01435 Peptidase family M48 DNA52_RS00525 PF01225 Mur ligase family, catalytic domain DNA52_RS00525 PF02875 Mur ligase family, glutamate ligase domain DNA52_RS00525 PF08245 Mur ligase middle domain DNA52_RS00530 PF00271 Helicase conserved C-terminal domain DNA52_RS00530 PF00270 DEAD/DEAH box helicase DNA52_RS00545 PF01648 4'-phosphopantetheinyl transferase superfamily DNA52_RS00550 PF00842 Alanine racemase, C-terminal domain DNA52_RS00550 PF01168 Alanine racemase, N-terminal domain DNA52_RS00555 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DNA52_RS00560 PF02705 K+ potassium transporter DNA52_RS00575 PF00005 ABC transporter DNA52_RS00580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DNA52_RS00580 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DNA52_RS00585 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DNA52_RS00585 PF00117 Glutamine amidotransferase class-I DNA52_RS00590 PF02774 Semialdehyde dehydrogenase, dimerisation domain DNA52_RS00590 PF01118 Semialdehyde dehydrogenase, NAD binding domain DNA52_RS00595 PF01960 ArgJ family DNA52_RS00600 PF00696 Amino acid kinase family DNA52_RS00605 PF00202 Aminotransferase class-III DNA52_RS00610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DNA52_RS00610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DNA52_RS00620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNA52_RS00625 PF00561 alpha/beta hydrolase fold DNA52_RS00645 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DNA52_RS00645 PF00056 lactate/malate dehydrogenase, NAD binding domain DNA52_RS00650 PF01195 Peptidyl-tRNA hydrolase DNA52_RS00655 PF00271 Helicase conserved C-terminal domain DNA52_RS00655 PF00270 DEAD/DEAH box helicase DNA52_RS00655 PF03461 TRCF domain DNA52_RS00655 PF02559 CarD-like/TRCF domain DNA52_RS00655 PF17757 UvrB interaction domain DNA52_RS00660 PF14667 Polysaccharide biosynthesis C-terminal domain DNA52_RS00660 PF01943 Polysaccharide biosynthesis protein DNA52_RS00665 PF01479 S4 domain DNA52_RS00675 PF00575 S1 RNA binding domain DNA52_RS00680 PF01171 PP-loop family DNA52_RS00680 PF11734 TilS substrate C-terminal domain DNA52_RS00685 PF01171 PP-loop family DNA52_RS00685 PF00156 Phosphoribosyl transferase domain DNA52_RS00685 PF11734 TilS substrate C-terminal domain DNA52_RS00690 PF01434 Peptidase family M41 DNA52_RS00690 PF06480 FtsH Extracellular DNA52_RS00690 PF17862 AAA+ lid domain DNA52_RS00690 PF00004 ATPase family associated with various cellular activities (AAA) DNA52_RS00695 PF01430 Hsp33 protein DNA52_RS00700 PF01207 Dihydrouridine synthase (Dus) DNA52_RS00705 PF01336 OB-fold nucleic acid binding domain DNA52_RS00705 PF00152 tRNA synthetases class II (D, K and N) DNA52_RS00745 PF00854 POT family DNA52_RS00790 PF04973 Nicotinamide mononucleotide transporter DNA52_RS00795 PF03807 NADP oxidoreductase coenzyme F420-dependent DNA52_RS00795 PF14748 Pyrroline-5-carboxylate reductase dimerisation DNA52_RS00800 PF01979 Amidohydrolase family DNA52_RS00800 PF13382 Adenine deaminase C-terminal domain DNA52_RS00805 PF07702 UTRA domain DNA52_RS00805 PF00392 Bacterial regulatory proteins, gntR family DNA52_RS00810 PF03808 Glycosyl transferase WecB/TagA/CpsF family DNA52_RS00815 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DNA52_RS00815 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DNA52_RS00815 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DNA52_RS00820 PF02540 NAD synthase DNA52_RS00825 PF00689 Cation transporting ATPase, C-terminus DNA52_RS00825 PF00690 Cation transporter/ATPase, N-terminus DNA52_RS00835 PF09371 Tex-like protein N-terminal domain DNA52_RS00835 PF00575 S1 RNA binding domain DNA52_RS00835 PF16921 Tex protein YqgF-like domain DNA52_RS00835 PF17674 HHH domain DNA52_RS00840 PF10263 SprT-like family DNA52_RS00845 PF03447 Homoserine dehydrogenase, NAD binding domain DNA52_RS00845 PF00742 Homoserine dehydrogenase DNA52_RS00845 PF01842 ACT domain DNA52_RS00850 PF00288 GHMP kinases N terminal domain DNA52_RS00850 PF08544 GHMP kinases C terminal DNA52_RS00865 PF08924 Domain of unknown function (DUF1906) DNA52_RS00865 PF01471 Putative peptidoglycan binding domain DNA52_RS00885 PF03830 PTS system sorbose subfamily IIB component DNA52_RS00885 PF03610 PTS system fructose IIA component DNA52_RS00890 PF03609 PTS system sorbose-specific iic component DNA52_RS00895 PF03613 PTS system mannose/fructose/sorbose family IID component DNA52_RS00910 PF00874 PRD domain DNA52_RS00910 PF03610 PTS system fructose IIA component DNA52_RS00910 PF00158 Sigma-54 interaction domain DNA52_RS00915 PF03610 PTS system fructose IIA component DNA52_RS00915 PF03830 PTS system sorbose subfamily IIB component DNA52_RS00920 PF03830 PTS system sorbose subfamily IIB component DNA52_RS00920 PF03610 PTS system fructose IIA component DNA52_RS00925 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DNA52_RS00925 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DNA52_RS00935 PF02785 Biotin carboxylase C-terminal domain DNA52_RS00935 PF00289 Biotin carboxylase, N-terminal domain DNA52_RS00935 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DNA52_RS00940 PF01039 Carboxyl transferase domain DNA52_RS00945 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DNA52_RS00950 PF03816 Cell envelope-related transcriptional attenuator domain DNA52_RS00960 PF00892 EamA-like transporter family DNA52_RS00965 PF00300 Histidine phosphatase superfamily (branch 1) DNA52_RS00975 PF03051 Peptidase C1-like family DNA52_RS00980 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DNA52_RS00990 PF00692 dUTPase DNA52_RS01010 PF18073 Rubredoxin metal binding domain DNA52_RS01020 PF00749 tRNA synthetases class I (E and Q), catalytic domain DNA52_RS01025 PF09190 DALR domain DNA52_RS01025 PF01406 tRNA synthetases class I (C) catalytic domain DNA52_RS01030 PF00636 Ribonuclease III domain DNA52_RS01035 PF08032 RNA 2'-O ribose methyltransferase substrate binding DNA52_RS01035 PF00588 SpoU rRNA Methylase family DNA52_RS01050 PF00471 Ribosomal protein L33 DNA52_RS01060 PF02357 Transcription termination factor nusG DNA52_RS01060 PF00467 KOW motif DNA52_RS01070 PF00298 Ribosomal protein L11, RNA binding domain DNA52_RS01070 PF03946 Ribosomal protein L11, N-terminal domain DNA52_RS01075 PF00687 Ribosomal protein L1p/L10e family DNA52_RS01080 PF00466 Ribosomal protein L10 DNA52_RS01085 PF00542 Ribosomal protein L7/L12 C-terminal domain DNA52_RS01085 PF16320 Ribosomal protein L7/L12 dimerisation domain DNA52_RS01100 PF09924 Uncharacterised conserved protein (DUF2156) DNA52_RS01100 PF03706 Lysylphosphatidylglycerol synthase TM region DNA52_RS01105 PF03641 Possible lysine decarboxylase DNA52_RS01110 PF00268 Ribonucleotide reductase, small chain DNA52_RS01115 PF08343 Ribonucleotide reductase N-terminal DNA52_RS01115 PF02867 Ribonucleotide reductase, barrel domain DNA52_RS01115 PF00317 Ribonucleotide reductase, all-alpha domain DNA52_RS01120 PF00462 Glutaredoxin DNA52_RS01125 PF05175 Methyltransferase small domain DNA52_RS01130 PF14437 MafB19-like deaminase DNA52_RS01140 PF12169 DNA polymerase III subunits gamma and tau domain III DNA52_RS01145 PF02575 YbaB/EbfC DNA-binding family DNA52_RS01150 PF13662 Toprim domain DNA52_RS01150 PF02132 RecR protein DNA52_RS01160 PF02223 Thymidylate kinase DNA52_RS01165 PF06153 Cyclic-di-AMP receptor DNA52_RS01170 PF09115 DNA polymerase III, delta subunit, C terminal DNA52_RS01175 PF06156 Initiation control protein YabA DNA52_RS01180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DNA52_RS01190 PF16363 GDP-mannose 4,6 dehydratase DNA52_RS01195 PF00266 Aminotransferase class-V DNA52_RS01200 PF13419 Haloacid dehalogenase-like hydrolase DNA52_RS01205 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS01210 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS01215 PF00005 ABC transporter DNA52_RS01225 PF00814 Glycoprotease family DNA52_RS01230 PF00583 Acetyltransferase (GNAT) family DNA52_RS01235 PF00583 Acetyltransferase (GNAT) family DNA52_RS01240 PF00814 Glycoprotease family DNA52_RS01250 PF12848 ABC transporter DNA52_RS01250 PF16326 ABC transporter C-terminal domain DNA52_RS01250 PF00005 ABC transporter DNA52_RS01255 PF06971 Putative DNA-binding protein N-terminus DNA52_RS01255 PF02629 CoA binding domain DNA52_RS01260 PF02517 CPBP intramembrane metalloprotease DNA52_RS01265 PF00166 Chaperonin 10 Kd subunit DNA52_RS01270 PF00118 TCP-1/cpn60 chaperonin family DNA52_RS01275 PF13520 Amino acid permease DNA52_RS01280 PF00953 Glycosyl transferase family 4 DNA52_RS01285 PF12849 PBP superfamily domain DNA52_RS01290 PF09186 Domain of unknown function (DUF1949) DNA52_RS01290 PF01205 Uncharacterized protein family UPF0029 DNA52_RS01295 PF04851 Type III restriction enzyme, res subunit DNA52_RS01295 PF00271 Helicase conserved C-terminal domain DNA52_RS01305 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DNA52_RS01305 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DNA52_RS01310 PF07517 SecA DEAD-like domain DNA52_RS01310 PF07516 SecA Wing and Scaffold domain DNA52_RS01310 PF01043 SecA preprotein cross-linking domain DNA52_RS01320 PF17820 PDZ domain DNA52_RS01325 PF00072 Response regulator receiver domain DNA52_RS01325 PF00486 Transcriptional regulatory protein, C terminal DNA52_RS01330 PF00512 His Kinase A (phospho-acceptor) domain DNA52_RS01330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNA52_RS01330 PF00989 PAS fold DNA52_RS01330 PF16736 Single Cache-like DNA52_RS01335 PF12849 PBP superfamily domain DNA52_RS01340 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS01345 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS01350 PF00005 ABC transporter DNA52_RS01355 PF00005 ABC transporter DNA52_RS01360 PF01895 PhoU domain DNA52_RS01365 PF04024 PspC domain DNA52_RS01370 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DNA52_RS01375 PF07475 HPr Serine kinase C-terminal domain DNA52_RS01375 PF02603 HPr Serine kinase N terminus DNA52_RS01380 PF01790 Prolipoprotein diacylglyceryl transferase DNA52_RS01385 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DNA52_RS01385 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DNA52_RS01390 PF00483 Nucleotidyl transferase DNA52_RS01405 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNA52_RS01405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNA52_RS01440 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNA52_RS01445 PF04239 Protein of unknown function (DUF421) DNA52_RS01455 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DNA52_RS01455 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DNA52_RS01455 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DNA52_RS01455 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DNA52_RS01465 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNA52_RS01465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNA52_RS01475 PF07690 Major Facilitator Superfamily DNA52_RS01485 PF17757 UvrB interaction domain DNA52_RS01485 PF02151 UvrB/uvrC motif DNA52_RS01485 PF00271 Helicase conserved C-terminal domain DNA52_RS01485 PF04851 Type III restriction enzyme, res subunit DNA52_RS01485 PF12344 Ultra-violet resistance protein B DNA52_RS01490 PF17755 UvrA DNA-binding domain DNA52_RS01490 PF17760 UvrA interaction domain DNA52_RS01490 PF00005 ABC transporter DNA52_RS01495 PF02664 S-Ribosylhomocysteinase (LuxS) DNA52_RS01500 PF00764 Arginosuccinate synthase DNA52_RS01505 PF14698 Argininosuccinate lyase C-terminal DNA52_RS01505 PF00206 Lyase DNA52_RS01515 PF03668 P-loop ATPase protein family DNA52_RS01520 PF01933 Uncharacterised protein family UPF0052 DNA52_RS01525 PF10298 WhiA N-terminal LAGLIDADG-like domain DNA52_RS01525 PF14527 WhiA LAGLIDADG-like domain DNA52_RS01525 PF02650 WhiA C-terminal HTH domain DNA52_RS01530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNA52_RS01535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNA52_RS01535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DNA52_RS01540 PF00574 Clp protease DNA52_RS01550 PF00309 Sigma-54 factor, Activator interacting domain (AID) DNA52_RS01550 PF04552 Sigma-54, DNA binding domain DNA52_RS01550 PF04963 Sigma-54 factor, core binding domain DNA52_RS01555 PF04198 Putative sugar-binding domain DNA52_RS01560 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DNA52_RS01560 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DNA52_RS01565 PF00162 Phosphoglycerate kinase DNA52_RS01570 PF00121 Triosephosphate isomerase DNA52_RS01575 PF00113 Enolase, C-terminal TIM barrel domain DNA52_RS01575 PF03952 Enolase, N-terminal domain DNA52_RS01590 PF00654 Voltage gated chloride channel DNA52_RS01595 PF03840 Preprotein translocase SecG subunit DNA52_RS01600 PF12146 Serine aminopeptidase, S33 DNA52_RS01605 PF00773 RNB domain DNA52_RS01605 PF00575 S1 RNA binding domain DNA52_RS01605 PF17876 Cold shock domain DNA52_RS01605 PF08206 Ribonuclease B OB domain DNA52_RS01610 PF01668 SmpB protein DNA52_RS01620 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS01625 PF00005 ABC transporter DNA52_RS01640 PF03167 Uracil DNA glycosylase superfamily DNA52_RS01645 PF01515 Phosphate acetyl/butaryl transferase DNA52_RS01650 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DNA52_RS01660 PF11490 DNA polymerase III polC-type N-terminus II DNA52_RS01660 PF07733 Bacterial DNA polymerase III alpha NTPase domain DNA52_RS01660 PF00929 Exonuclease DNA52_RS01660 PF14480 DNA polymerase III polC-type N-terminus I DNA52_RS01660 PF02811 PHP domain DNA52_RS01660 PF14579 Helix-hairpin-helix motif DNA52_RS01660 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DNA52_RS01665 PF03372 Endonuclease/Exonuclease/phosphatase family DNA52_RS01670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNA52_RS01675 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DNA52_RS01675 PF01565 FAD binding domain DNA52_RS01680 PF00999 Sodium/hydrogen exchanger family DNA52_RS01695 PF02457 DisA bacterial checkpoint controller nucleotide-binding DNA52_RS01705 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DNA52_RS01705 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DNA52_RS01705 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DNA52_RS01705 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DNA52_RS01710 PF01380 SIS domain DNA52_RS01730 PF01263 Aldose 1-epimerase DNA52_RS01745 PF00881 Nitroreductase family DNA52_RS01770 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNA52_RS01770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNA52_RS01785 PF03960 ArsC family DNA52_RS01800 PF07690 Major Facilitator Superfamily DNA52_RS01805 PF02541 Ppx/GppA phosphatase family DNA52_RS01810 PF13090 Polyphosphate kinase C-terminal domain 2 DNA52_RS01810 PF13089 Polyphosphate kinase N-terminal domain DNA52_RS01810 PF17941 Polyphosphate kinase C-terminal domain 1 DNA52_RS01810 PF02503 Polyphosphate kinase middle domain DNA52_RS01820 PF04991 LicD family DNA52_RS01835 PF00860 Permease family DNA52_RS01840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNA52_RS01840 PF00205 Thiamine pyrophosphate enzyme, central domain DNA52_RS01840 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNA52_RS01845 PF01687 Riboflavin kinase DNA52_RS01845 PF06574 FAD synthetase DNA52_RS01850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNA52_RS01850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNA52_RS01850 PF00205 Thiamine pyrophosphate enzyme, central domain DNA52_RS01855 PF00561 alpha/beta hydrolase fold DNA52_RS01865 PF01757 Acyltransferase family DNA52_RS01870 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DNA52_RS01870 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DNA52_RS01870 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal DNA52_RS01885 PF13520 Amino acid permease DNA52_RS01900 PF03099 Biotin/lipoate A/B protein ligase family DNA52_RS01900 PF00293 NUDIX domain DNA52_RS01910 PF00625 Guanylate kinase DNA52_RS01915 PF01475 Ferric uptake regulator family DNA52_RS01930 PF13419 Haloacid dehalogenase-like hydrolase DNA52_RS01935 PF00155 Aminotransferase class I and II DNA52_RS01940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DNA52_RS01940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNA52_RS01955 PF00005 ABC transporter DNA52_RS01960 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNA52_RS01965 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS01970 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS01975 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DNA52_RS01975 PF00367 phosphotransferase system, EIIB DNA52_RS01975 PF02378 Phosphotransferase system, EIIC DNA52_RS01985 PF02378 Phosphotransferase system, EIIC DNA52_RS01985 PF00367 phosphotransferase system, EIIB DNA52_RS01990 PF04794 YdjC-like protein DNA52_RS01995 PF13520 Amino acid permease DNA52_RS02005 PF01047 MarR family DNA52_RS02035 PF01926 50S ribosome-binding GTPase DNA52_RS02035 PF13167 GTP-binding GTPase N-terminal DNA52_RS02035 PF16360 GTP-binding GTPase Middle Region DNA52_RS02040 PF13344 Haloacid dehalogenase-like hydrolase DNA52_RS02040 PF00293 NUDIX domain DNA52_RS02045 PF00893 Small Multidrug Resistance protein DNA52_RS02055 PF00300 Histidine phosphatase superfamily (branch 1) DNA52_RS02060 PF00300 Histidine phosphatase superfamily (branch 1) DNA52_RS02065 PF02254 TrkA-N domain DNA52_RS02065 PF02080 TrkA-C domain DNA52_RS02065 PF00999 Sodium/hydrogen exchanger family DNA52_RS02070 PF04229 GrpB protein DNA52_RS02070 PF13673 Acetyltransferase (GNAT) domain DNA52_RS02075 PF00874 PRD domain DNA52_RS02075 PF03123 CAT RNA binding domain DNA52_RS02080 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DNA52_RS02080 PF00367 phosphotransferase system, EIIB DNA52_RS02080 PF02378 Phosphotransferase system, EIIC DNA52_RS02085 PF00232 Glycosyl hydrolase family 1 DNA52_RS02090 PF09335 SNARE associated Golgi protein DNA52_RS02095 PF13538 UvrD-like helicase C-terminal domain DNA52_RS02105 PF03060 Nitronate monooxygenase DNA52_RS02110 PF00485 Phosphoribulokinase / Uridine kinase family DNA52_RS02115 PF00117 Glutamine amidotransferase class-I DNA52_RS02115 PF00958 GMP synthase C terminal domain DNA52_RS02115 PF02540 NAD synthase DNA52_RS02125 PF01381 Helix-turn-helix DNA52_RS02135 PF02517 CPBP intramembrane metalloprotease DNA52_RS02140 PF01638 HxlR-like helix-turn-helix DNA52_RS02145 PF07690 Major Facilitator Superfamily DNA52_RS02160 PF01757 Acyltransferase family DNA52_RS02165 PF04226 Transglycosylase associated protein DNA52_RS02180 PF03780 Asp23 family, cell envelope-related function DNA52_RS02190 PF01557 Fumarylacetoacetate (FAA) hydrolase family DNA52_RS02210 PF11838 ERAP1-like C-terminal domain DNA52_RS02210 PF01433 Peptidase family M1 domain DNA52_RS02215 PF12008 Type I restriction and modification enzyme - subunit R C terminal DNA52_RS02215 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DNA52_RS02215 PF18766 SWI2/SNF2 ATPase DNA52_RS02220 PF02384 N-6 DNA Methylase DNA52_RS02220 PF12161 HsdM N-terminal domain DNA52_RS02250 PF06458 MucBP domain DNA52_RS02260 PF00485 Phosphoribulokinase / Uridine kinase family DNA52_RS02275 PF03466 LysR substrate binding domain DNA52_RS02275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNA52_RS02280 PF00890 FAD binding domain DNA52_RS02280 PF14537 Cytochrome c3 DNA52_RS02290 PF02525 Flavodoxin-like fold DNA52_RS02295 PF00152 tRNA synthetases class II (D, K and N) DNA52_RS02295 PF01336 OB-fold nucleic acid binding domain DNA52_RS02300 PF03590 Aspartate-ammonia ligase DNA52_RS02305 PF03577 Peptidase family C69 DNA52_RS02325 PF00271 Helicase conserved C-terminal domain DNA52_RS02325 PF00270 DEAD/DEAH box helicase DNA52_RS02325 PF00570 HRDC domain DNA52_RS02325 PF16124 RecQ zinc-binding DNA52_RS02325 PF09382 RQC domain DNA52_RS02330 PF00849 RNA pseudouridylate synthase DNA52_RS02335 PF01022 Bacterial regulatory protein, arsR family DNA52_RS02365 PF00106 short chain dehydrogenase DNA52_RS02365 PF00300 Histidine phosphatase superfamily (branch 1) DNA52_RS02375 PF07859 alpha/beta hydrolase fold DNA52_RS02385 PF02875 Mur ligase family, glutamate ligase domain DNA52_RS02385 PF08245 Mur ligase middle domain DNA52_RS02385 PF01225 Mur ligase family, catalytic domain DNA52_RS02390 PF00696 Amino acid kinase family DNA52_RS02390 PF13840 ACT domain DNA52_RS02395 PF00733 Asparagine synthase DNA52_RS02395 PF13537 Glutamine amidotransferase domain DNA52_RS02445 PF07690 Major Facilitator Superfamily DNA52_RS02465 PF00313 'Cold-shock' DNA-binding domain DNA52_RS02470 PF06738 Putative threonine/serine exporter DNA52_RS02480 PF03816 Cell envelope-related transcriptional attenuator domain DNA52_RS02500 PF02082 Transcriptional regulator DNA52_RS02505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNA52_RS02505 PF00205 Thiamine pyrophosphate enzyme, central domain DNA52_RS02505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNA52_RS02510 PF00324 Amino acid permease DNA52_RS02520 PF01712 Deoxynucleoside kinase DNA52_RS02525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DNA52_RS02525 PF02403 Seryl-tRNA synthetase N-terminal domain DNA52_RS02565 PF17727 CtsR C-terminal dimerization domain DNA52_RS02565 PF05848 CtsR N-terminal HTH domain DNA52_RS02570 PF10431 C-terminal, D2-small domain, of ClpB protein DNA52_RS02570 PF17871 AAA lid domain DNA52_RS02570 PF00004 ATPase family associated with various cellular activities (AAA) DNA52_RS02570 PF07724 AAA domain (Cdc48 subfamily) DNA52_RS02570 PF02861 Clp amino terminal domain, pathogenicity island component DNA52_RS02575 PF00440 Bacterial regulatory proteins, tetR family DNA52_RS02575 PF08360 QacR-like protein, C-terminal region DNA52_RS02580 PF00562 RNA polymerase Rpb2, domain 6 DNA52_RS02580 PF10385 RNA polymerase beta subunit external 1 domain DNA52_RS02580 PF04561 RNA polymerase Rpb2, domain 2 DNA52_RS02580 PF04563 RNA polymerase beta subunit DNA52_RS02580 PF04565 RNA polymerase Rpb2, domain 3 DNA52_RS02580 PF04560 RNA polymerase Rpb2, domain 7 DNA52_RS02585 PF04997 RNA polymerase Rpb1, domain 1 DNA52_RS02585 PF04983 RNA polymerase Rpb1, domain 3 DNA52_RS02585 PF00623 RNA polymerase Rpb1, domain 2 DNA52_RS02585 PF04998 RNA polymerase Rpb1, domain 5 DNA52_RS02585 PF05000 RNA polymerase Rpb1, domain 4 DNA52_RS02590 PF06750 Bacterial Peptidase A24 N-terminal domain DNA52_RS02590 PF01478 Type IV leader peptidase family DNA52_RS02595 PF00164 Ribosomal protein S12/S23 DNA52_RS02600 PF00177 Ribosomal protein S7p/S5e DNA52_RS02605 PF14492 Elongation Factor G, domain II DNA52_RS02605 PF00009 Elongation factor Tu GTP binding domain DNA52_RS02605 PF03144 Elongation factor Tu domain 2 DNA52_RS02605 PF00679 Elongation factor G C-terminus DNA52_RS02605 PF03764 Elongation factor G, domain IV DNA52_RS02610 PF00338 Ribosomal protein S10p/S20e DNA52_RS02615 PF00297 Ribosomal protein L3 DNA52_RS02620 PF00573 Ribosomal protein L4/L1 family DNA52_RS02625 PF00276 Ribosomal protein L23 DNA52_RS02630 PF00181 Ribosomal Proteins L2, RNA binding domain DNA52_RS02630 PF03947 Ribosomal Proteins L2, C-terminal domain DNA52_RS02635 PF00203 Ribosomal protein S19 DNA52_RS02640 PF00237 Ribosomal protein L22p/L17e DNA52_RS02645 PF07650 KH domain DNA52_RS02645 PF00189 Ribosomal protein S3, C-terminal domain DNA52_RS02650 PF00252 Ribosomal protein L16p/L10e DNA52_RS02655 PF00831 Ribosomal L29 protein DNA52_RS02660 PF00366 Ribosomal protein S17 DNA52_RS02665 PF00238 Ribosomal protein L14p/L23e DNA52_RS02670 PF00467 KOW motif DNA52_RS02670 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DNA52_RS02675 PF00673 ribosomal L5P family C-terminus DNA52_RS02675 PF00281 Ribosomal protein L5 DNA52_RS02680 PF00253 Ribosomal protein S14p/S29e DNA52_RS02685 PF00410 Ribosomal protein S8 DNA52_RS02690 PF00347 Ribosomal protein L6 DNA52_RS02695 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DNA52_RS02700 PF00333 Ribosomal protein S5, N-terminal domain DNA52_RS02700 PF03719 Ribosomal protein S5, C-terminal domain DNA52_RS02705 PF00327 Ribosomal protein L30p/L7e DNA52_RS02710 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DNA52_RS02715 PF00344 SecY translocase DNA52_RS02720 PF05191 Adenylate kinase, active site lid DNA52_RS02725 PF01176 Translation initiation factor 1A / IF-1 DNA52_RS02730 PF00444 Ribosomal protein L36 DNA52_RS02735 PF00416 Ribosomal protein S13/S18 DNA52_RS02740 PF00411 Ribosomal protein S11 DNA52_RS02745 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DNA52_RS02745 PF01000 RNA polymerase Rpb3/RpoA insert domain DNA52_RS02745 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DNA52_RS02750 PF01196 Ribosomal protein L17 DNA52_RS02755 PF00348 Polyprenyl synthetase DNA52_RS02775 PF04205 FMN-binding domain DNA52_RS02780 PF02424 ApbE family DNA52_RS02785 PF00005 ABC transporter DNA52_RS02790 PF00005 ABC transporter DNA52_RS02795 PF02361 Cobalt transport protein DNA52_RS02800 PF01416 tRNA pseudouridine synthase DNA52_RS02805 PF00572 Ribosomal protein L13 DNA52_RS02810 PF00380 Ribosomal protein S9/S16 DNA52_RS02815 PF02645 Uncharacterised protein, DegV family COG1307 DNA52_RS02830 PF02780 Transketolase, C-terminal domain DNA52_RS02830 PF00456 Transketolase, thiamine diphosphate binding domain DNA52_RS02830 PF02779 Transketolase, pyrimidine binding domain DNA52_RS02835 PF08501 Shikimate dehydrogenase substrate binding domain DNA52_RS02835 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DNA52_RS02840 PF18152 DAHP synthase ferredoxin-like domain DNA52_RS02840 PF00793 DAHP synthetase I family DNA52_RS02845 PF01761 3-dehydroquinate synthase DNA52_RS02850 PF00939 Sodium:sulfate symporter transmembrane region DNA52_RS02855 PF01883 Iron-sulfur cluster assembly protein DNA52_RS02860 PF05683 Fumarase C-terminus DNA52_RS02865 PF05681 Fumarate hydratase (Fumerase) DNA52_RS02870 PF12833 Helix-turn-helix domain DNA52_RS02870 PF02311 AraC-like ligand binding domain DNA52_RS02875 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DNA52_RS02880 PF00005 ABC transporter DNA52_RS02885 PF00950 ABC 3 transport family DNA52_RS02890 PF01297 Zinc-uptake complex component A periplasmic DNA52_RS02900 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DNA52_RS02900 PF00056 lactate/malate dehydrogenase, NAD binding domain DNA52_RS02905 PF00939 Sodium:sulfate symporter transmembrane region DNA52_RS02915 PF03949 Malic enzyme, NAD binding domain DNA52_RS02915 PF00390 Malic enzyme, N-terminal domain DNA52_RS02920 PF08218 Citrate lyase ligase C-terminal domain DNA52_RS02925 PF06857 Malonate decarboxylase delta subunit (MdcD) DNA52_RS02930 PF03328 HpcH/HpaI aldolase/citrate lyase family DNA52_RS02935 PF04223 Citrate lyase, alpha subunit (CitF) DNA52_RS02945 PF10415 Fumarase C C-terminus DNA52_RS02945 PF00206 Lyase DNA52_RS02950 PF14537 Cytochrome c3 DNA52_RS02950 PF00890 FAD binding domain DNA52_RS02955 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase DNA52_RS02955 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DNA52_RS02960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNA52_RS02960 PF03466 LysR substrate binding domain DNA52_RS02970 PF03466 LysR substrate binding domain DNA52_RS02970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNA52_RS02975 PF00390 Malic enzyme, N-terminal domain DNA52_RS02975 PF03949 Malic enzyme, NAD binding domain DNA52_RS02985 PF13520 Amino acid permease DNA52_RS02990 PF12822 ECF transporter, substrate-specific component DNA52_RS03005 PF01654 Cytochrome bd terminal oxidase subunit I DNA52_RS03010 PF02322 Cytochrome bd terminal oxidase subunit II DNA52_RS03015 PF00664 ABC transporter transmembrane region DNA52_RS03015 PF00005 ABC transporter DNA52_RS03020 PF00005 ABC transporter DNA52_RS03020 PF00664 ABC transporter transmembrane region DNA52_RS03035 PF00348 Polyprenyl synthetase DNA52_RS03045 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNA52_RS03045 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNA52_RS03050 PF13457 GW (Gly-Tryp) dipeptide domain DNA52_RS03050 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DNA52_RS03060 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DNA52_RS03065 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DNA52_RS03065 PF02222 ATP-grasp domain DNA52_RS03070 PF00580 UvrD/REP helicase N-terminal domain DNA52_RS03070 PF13361 UvrD-like helicase C-terminal domain DNA52_RS03075 PF00533 BRCA1 C Terminus (BRCT) domain DNA52_RS03075 PF12826 Helix-hairpin-helix motif DNA52_RS03075 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DNA52_RS03075 PF03120 NAD-dependent DNA ligase OB-fold domain DNA52_RS03075 PF01653 NAD-dependent DNA ligase adenylation domain DNA52_RS03080 PF07537 CamS sex pheromone cAM373 precursor DNA52_RS03085 PF02686 Glu-tRNAGln amidotransferase C subunit DNA52_RS03090 PF01425 Amidase DNA52_RS03095 PF02637 GatB domain DNA52_RS03095 PF02934 GatB/GatE catalytic domain DNA52_RS03100 PF00781 Diacylglycerol kinase catalytic domain DNA52_RS03105 PF01938 TRAM domain DNA52_RS03105 PF05958 tRNA (Uracil-5-)-methyltransferase DNA52_RS03120 PF02378 Phosphotransferase system, EIIC DNA52_RS03130 PF01418 Helix-turn-helix domain, rpiR family DNA52_RS03130 PF01380 SIS domain DNA52_RS03145 PF00313 'Cold-shock' DNA-binding domain DNA52_RS03150 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNA52_RS03150 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNA52_RS03155 PF00270 DEAD/DEAH box helicase DNA52_RS03155 PF00271 Helicase conserved C-terminal domain DNA52_RS03170 PF02378 Phosphotransferase system, EIIC DNA52_RS03195 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DNA52_RS03195 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DNA52_RS03205 PF02350 UDP-N-acetylglucosamine 2-epimerase DNA52_RS03215 PF00230 Major intrinsic protein DNA52_RS03250 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DNA52_RS03250 PF00535 Glycosyl transferase family 2 DNA52_RS03255 PF00132 Bacterial transferase hexapeptide (six repeats) DNA52_RS03285 PF00483 Nucleotidyl transferase DNA52_RS03290 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DNA52_RS03295 PF16363 GDP-mannose 4,6 dehydratase DNA52_RS03300 PF04321 RmlD substrate binding domain DNA52_RS03310 PF00589 Phage integrase family DNA52_RS03320 PF13614 AAA domain DNA52_RS03330 PF16363 GDP-mannose 4,6 dehydratase DNA52_RS03335 PF02397 Bacterial sugar transferase DNA52_RS03340 PF00535 Glycosyl transferase family 2 DNA52_RS03350 PF00535 Glycosyl transferase family 2 DNA52_RS03350 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DNA52_RS03390 PF03275 UDP-galactopyranose mutase DNA52_RS03425 PF12833 Helix-turn-helix domain DNA52_RS03430 PF00746 LPXTG cell wall anchor motif DNA52_RS03445 PF02397 Bacterial sugar transferase DNA52_RS03480 PF02631 RecX family DNA52_RS03485 PF04167 Protein of unknown function (DUF402) DNA52_RS03490 PF01476 LysM domain DNA52_RS03490 PF08239 Bacterial SH3 domain DNA52_RS03490 PF00877 NlpC/P60 family DNA52_RS03505 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DNA52_RS03505 PF00056 lactate/malate dehydrogenase, NAD binding domain DNA52_RS03510 PF01594 AI-2E family transporter DNA52_RS03515 PF01467 Cytidylyltransferase-like DNA52_RS03520 PF02447 GntP family permease DNA52_RS03525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNA52_RS03525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNA52_RS03530 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DNA52_RS03530 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DNA52_RS03535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNA52_RS03535 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNA52_RS03540 PF16658 Class II release factor RF3, C-terminal domain DNA52_RS03540 PF00009 Elongation factor Tu GTP binding domain DNA52_RS03540 PF03144 Elongation factor Tu domain 2 DNA52_RS03560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNA52_RS03560 PF03466 LysR substrate binding domain DNA52_RS03575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNA52_RS03580 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS03585 PF12911 N-terminal TM domain of oligopeptide transport permease C DNA52_RS03585 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS03590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNA52_RS03590 PF00005 ABC transporter DNA52_RS03595 PF00005 ABC transporter DNA52_RS03595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DNA52_RS03605 PF00589 Phage integrase family DNA52_RS03610 PF10431 C-terminal, D2-small domain, of ClpB protein DNA52_RS03610 PF17871 AAA lid domain DNA52_RS03610 PF00004 ATPase family associated with various cellular activities (AAA) DNA52_RS03610 PF07724 AAA domain (Cdc48 subfamily) DNA52_RS03620 PF00381 PTS HPr component phosphorylation site DNA52_RS03625 PF02896 PEP-utilising enzyme, TIM barrel domain DNA52_RS03625 PF00391 PEP-utilising enzyme, mobile domain DNA52_RS03625 PF05524 PEP-utilising enzyme, N-terminal DNA52_RS03630 PF13439 Glycosyltransferase Family 4 DNA52_RS03630 PF00534 Glycosyl transferases group 1 DNA52_RS03635 PF00534 Glycosyl transferases group 1 DNA52_RS03635 PF13439 Glycosyltransferase Family 4 DNA52_RS03645 PF07943 Penicillin-binding protein 5, C-terminal domain DNA52_RS03645 PF00768 D-alanyl-D-alanine carboxypeptidase DNA52_RS03650 PF00155 Aminotransferase class I and II DNA52_RS03655 PF08796 Protein of unknown function (DUF1797) DNA52_RS03660 PF00884 Sulfatase DNA52_RS03750 PF00156 Phosphoribosyl transferase domain DNA52_RS03770 PF00149 Calcineurin-like phosphoesterase DNA52_RS03780 PF01566 Natural resistance-associated macrophage protein DNA52_RS03785 PF00762 Ferrochelatase DNA52_RS03790 PF00324 Amino acid permease DNA52_RS03795 PF02574 Homocysteine S-methyltransferase DNA52_RS03800 PF00534 Glycosyl transferases group 1 DNA52_RS03800 PF00862 Sucrose synthase DNA52_RS03810 PF02772 S-adenosylmethionine synthetase, central domain DNA52_RS03810 PF00438 S-adenosylmethionine synthetase, N-terminal domain DNA52_RS03810 PF02773 S-adenosylmethionine synthetase, C-terminal domain DNA52_RS03815 PF07690 Major Facilitator Superfamily DNA52_RS03830 PF00862 Sucrose synthase DNA52_RS03830 PF00534 Glycosyl transferases group 1 DNA52_RS03835 PF00534 Glycosyl transferases group 1 DNA52_RS03845 PF06962 Putative rRNA methylase DNA52_RS03850 PF01569 PAP2 superfamily DNA52_RS03855 PF09334 tRNA synthetases class I (M) DNA52_RS03855 PF08264 Anticodon-binding domain of tRNA DNA52_RS03855 PF00133 tRNA synthetases class I (I, L, M and V) DNA52_RS03855 PF13603 Leucyl-tRNA synthetase, Domain 2 DNA52_RS03860 PF14667 Polysaccharide biosynthesis C-terminal domain DNA52_RS03860 PF01943 Polysaccharide biosynthesis protein DNA52_RS03865 PF00849 RNA pseudouridylate synthase DNA52_RS03865 PF01479 S4 domain DNA52_RS03870 PF01256 Carbohydrate kinase DNA52_RS03875 PF01546 Peptidase family M20/M25/M40 DNA52_RS03885 PF17912 MalK OB fold domain DNA52_RS03885 PF00005 ABC transporter DNA52_RS03890 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS03895 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS03905 PF03009 Glycerophosphoryl diester phosphodiesterase family DNA52_RS03910 PF01712 Deoxynucleoside kinase DNA52_RS03915 PF01741 Large-conductance mechanosensitive channel, MscL DNA52_RS03935 PF00005 ABC transporter DNA52_RS03940 PF04397 LytTr DNA-binding domain DNA52_RS03940 PF00072 Response regulator receiver domain DNA52_RS03950 PF01625 Peptide methionine sulfoxide reductase DNA52_RS03955 PF13411 MerR HTH family regulatory protein DNA52_RS03965 PF00892 EamA-like transporter family DNA52_RS03990 PF00072 Response regulator receiver domain DNA52_RS03990 PF04397 LytTr DNA-binding domain DNA52_RS04025 PF17760 UvrA interaction domain DNA52_RS04025 PF17755 UvrA DNA-binding domain DNA52_RS04025 PF00005 ABC transporter DNA52_RS04235 PF00877 NlpC/P60 family DNA52_RS04310 PF07457 Protein of unknown function (DUF1516) DNA52_RS04315 PF02219 Methylenetetrahydrofolate reductase DNA52_RS04315 PF02574 Homocysteine S-methyltransferase DNA52_RS04320 PF08267 Cobalamin-independent synthase, N-terminal domain DNA52_RS04320 PF01717 Cobalamin-independent synthase, Catalytic domain DNA52_RS04330 PF01747 ATP-sulfurylase DNA52_RS04330 PF14306 PUA-like domain DNA52_RS04340 PF01368 DHH family DNA52_RS04340 PF02272 DHHA1 domain DNA52_RS04350 PF02080 TrkA-C domain DNA52_RS04350 PF03600 Citrate transporter DNA52_RS04355 PF01554 MatE DNA52_RS04375 PF13673 Acetyltransferase (GNAT) domain DNA52_RS04380 PF00750 tRNA synthetases class I (R) DNA52_RS04380 PF05746 DALR anticodon binding domain DNA52_RS04380 PF03485 Arginyl tRNA synthetase N terminal domain DNA52_RS04390 PF12704 MacB-like periplasmic core domain DNA52_RS04390 PF02687 FtsX-like permease family DNA52_RS04390 PF00005 ABC transporter DNA52_RS04405 PF03734 L,D-transpeptidase catalytic domain DNA52_RS04410 PF00550 Phosphopantetheine attachment site DNA52_RS04415 PF00155 Aminotransferase class I and II DNA52_RS04415 PF00392 Bacterial regulatory proteins, gntR family DNA52_RS04425 PF00155 Aminotransferase class I and II DNA52_RS04430 PF01316 Arginine repressor, DNA binding domain DNA52_RS04430 PF02863 Arginine repressor, C-terminal domain DNA52_RS04440 PF00905 Penicillin binding protein transpeptidase domain DNA52_RS04440 PF00912 Transglycosylase DNA52_RS04445 PF06133 Control of competence regulator ComK, YlbF/YmcA DNA52_RS04450 PF00149 Calcineurin-like phosphoesterase DNA52_RS04455 PF13514 AAA domain DNA52_RS04460 PF01966 HD domain DNA52_RS04475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNA52_RS04475 PF03466 LysR substrate binding domain DNA52_RS04480 PF03358 NADPH-dependent FMN reductase DNA52_RS04480 PF04205 FMN-binding domain DNA52_RS04480 PF00890 FAD binding domain DNA52_RS04485 PF03358 NADPH-dependent FMN reductase DNA52_RS04485 PF04205 FMN-binding domain DNA52_RS04485 PF00890 FAD binding domain DNA52_RS04525 PF00403 Heavy-metal-associated domain DNA52_RS04530 PF03952 Enolase, N-terminal domain DNA52_RS04530 PF00113 Enolase, C-terminal TIM barrel domain DNA52_RS04535 PF00488 MutS domain V DNA52_RS04535 PF05188 MutS domain II DNA52_RS04535 PF01624 MutS domain I DNA52_RS04535 PF05192 MutS domain III DNA52_RS04535 PF05190 MutS family domain IV DNA52_RS04540 PF00488 MutS domain V DNA52_RS04540 PF01624 MutS domain I DNA52_RS04540 PF05188 MutS domain II DNA52_RS04540 PF05192 MutS domain III DNA52_RS04540 PF05190 MutS family domain IV DNA52_RS04550 PF00535 Glycosyl transferase family 2 DNA52_RS04570 PF01872 RibD C-terminal domain DNA52_RS04570 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DNA52_RS04575 PF00677 Lumazine binding domain DNA52_RS04580 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DNA52_RS04580 PF00925 GTP cyclohydrolase II DNA52_RS04585 PF00885 6,7-dimethyl-8-ribityllumazine synthase DNA52_RS04600 PF13545 Crp-like helix-turn-helix domain DNA52_RS04600 PF00027 Cyclic nucleotide-binding domain DNA52_RS04610 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNA52_RS04610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNA52_RS04640 PF00639 PPIC-type PPIASE domain DNA52_RS04650 PF01230 HIT domain DNA52_RS04655 PF00005 ABC transporter DNA52_RS04660 PF05975 Bacterial ABC transporter protein EcsB DNA52_RS04665 PF01636 Phosphotransferase enzyme family DNA52_RS04670 PF02390 Putative methyltransferase DNA52_RS04680 PF14794 Domain of unknown function (DUF4479) DNA52_RS04680 PF01588 Putative tRNA binding domain DNA52_RS04685 PF17854 FtsK alpha domain DNA52_RS04685 PF01580 FtsK/SpoIIIE family DNA52_RS04685 PF09397 Ftsk gamma domain DNA52_RS04690 PF01225 Mur ligase family, catalytic domain DNA52_RS04690 PF02875 Mur ligase family, glutamate ligase domain DNA52_RS04690 PF08245 Mur ligase middle domain DNA52_RS04700 PF07664 Ferrous iron transport protein B C terminus DNA52_RS04700 PF07670 Nucleoside recognition DNA52_RS04700 PF17910 FeoB cytosolic helical domain DNA52_RS04700 PF02421 Ferrous iron transport protein B DNA52_RS04710 PF00005 ABC transporter DNA52_RS04715 PF01458 Uncharacterized protein family (UPF0051) DNA52_RS04720 PF00266 Aminotransferase class-V DNA52_RS04725 PF01592 NifU-like N terminal domain DNA52_RS04730 PF01458 Uncharacterized protein family (UPF0051) DNA52_RS04735 PF01883 Iron-sulfur cluster assembly protein DNA52_RS04745 PF01027 Inhibitor of apoptosis-promoting Bax1 DNA52_RS04750 PF00476 DNA polymerase family A DNA52_RS04750 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DNA52_RS04750 PF01367 5'-3' exonuclease, C-terminal SAM fold DNA52_RS04755 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DNA52_RS04755 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DNA52_RS04755 PF06827 Zinc finger found in FPG and IleRS DNA52_RS04760 PF01121 Dephospho-CoA kinase DNA52_RS04765 PF03477 ATP cone domain DNA52_RS04770 PF07261 Replication initiation and membrane attachment DNA52_RS04775 PF07319 Primosomal protein DnaI N-terminus DNA52_RS04775 PF01695 IstB-like ATP binding protein DNA52_RS04780 PF02824 TGS domain DNA52_RS04780 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DNA52_RS04780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DNA52_RS04780 PF03129 Anticodon binding domain DNA52_RS04785 PF00707 Translation initiation factor IF-3, C-terminal domain DNA52_RS04785 PF05198 Translation initiation factor IF-3, N-terminal domain DNA52_RS04790 PF01632 Ribosomal protein L35 DNA52_RS04795 PF00453 Ribosomal protein L20 DNA52_RS04805 PF05496 Holliday junction DNA helicase RuvB P-loop domain DNA52_RS04805 PF12002 MgsA AAA+ ATPase C terminal DNA52_RS04805 PF16193 AAA C-terminal domain DNA52_RS04810 PF00107 Zinc-binding dehydrogenase DNA52_RS04810 PF08240 Alcohol dehydrogenase GroES-like domain DNA52_RS04815 PF01638 HxlR-like helix-turn-helix DNA52_RS04820 PF01177 Asp/Glu/Hydantoin racemase DNA52_RS04825 PF00535 Glycosyl transferase family 2 DNA52_RS04840 PF01926 50S ribosome-binding GTPase DNA52_RS04845 PF01985 CRS1 / YhbY (CRM) domain DNA52_RS04850 PF01467 Cytidylyltransferase-like DNA52_RS04855 PF01966 HD domain DNA52_RS04865 PF13649 Methyltransferase domain DNA52_RS04870 PF05636 HIGH Nucleotidyl Transferase DNA52_RS04880 PF01783 Ribosomal L32p protein family DNA52_RS04895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DNA52_RS04895 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DNA52_RS04900 PF12002 MgsA AAA+ ATPase C terminal DNA52_RS04900 PF16193 AAA C-terminal domain DNA52_RS04900 PF00004 ATPase family associated with various cellular activities (AAA) DNA52_RS04905 PF00072 Response regulator receiver domain DNA52_RS04905 PF00486 Transcriptional regulatory protein, C terminal DNA52_RS04910 PF18719 ArlS sensor domain DNA52_RS04910 PF00512 His Kinase A (phospho-acceptor) domain DNA52_RS04910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNA52_RS04920 PF13476 AAA domain DNA52_RS04925 PF00149 Calcineurin-like phosphoesterase DNA52_RS04925 PF12320 Type 5 capsule protein repressor C-terminal domain DNA52_RS04935 PF02096 60Kd inner membrane protein DNA52_RS04940 PF00708 Acylphosphatase DNA52_RS04945 PF08032 RNA 2'-O ribose methyltransferase substrate binding DNA52_RS04945 PF00588 SpoU rRNA Methylase family DNA52_RS04955 PF01638 HxlR-like helix-turn-helix DNA52_RS04960 PF01409 tRNA synthetases class II core domain (F) DNA52_RS04960 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DNA52_RS04965 PF01588 Putative tRNA binding domain DNA52_RS04965 PF03147 Ferredoxin-fold anticodon binding domain DNA52_RS04965 PF03484 tRNA synthetase B5 domain DNA52_RS04965 PF03483 B3/4 domain DNA52_RS04965 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DNA52_RS04970 PF02618 YceG-like family DNA52_RS04975 PF00485 Phosphoribulokinase / Uridine kinase family DNA52_RS04980 PF03449 Transcription elongation factor, N-terminal DNA52_RS04980 PF01272 Transcription elongation factor, GreA/GreB, C-term DNA52_RS05000 PF01521 Iron-sulphur cluster biosynthesis DNA52_RS05010 PF03717 Penicillin-binding Protein dimerisation domain DNA52_RS05010 PF00905 Penicillin binding protein transpeptidase domain DNA52_RS05015 PF00471 Ribosomal protein L33 DNA52_RS05020 PF01812 5-formyltetrahydrofolate cyclo-ligase family DNA52_RS05025 PF01694 Rhomboid family DNA52_RS05035 PF00480 ROK family DNA52_RS05055 PF03009 Glycerophosphoryl diester phosphodiesterase family DNA52_RS05065 PF13411 MerR HTH family regulatory protein DNA52_RS05070 PF00120 Glutamine synthetase, catalytic domain DNA52_RS05070 PF03951 Glutamine synthetase, beta-Grasp domain DNA52_RS05115 PF00829 Ribosomal prokaryotic L21 protein DNA52_RS05125 PF01016 Ribosomal L27 protein DNA52_RS05130 PF00557 Metallopeptidase family M24 DNA52_RS05130 PF01321 Creatinase/Prolidase N-terminal domain DNA52_RS05135 PF08207 Elongation factor P (EF-P) KOW-like domain DNA52_RS05135 PF01132 Elongation factor P (EF-P) OB domain DNA52_RS05135 PF09285 Elongation factor P, C-terminal DNA52_RS05140 PF03780 Asp23 family, cell envelope-related function DNA52_RS05145 PF01029 NusB family DNA52_RS05150 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DNA52_RS05150 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DNA52_RS05155 PF13742 OB-fold nucleic acid binding domain DNA52_RS05155 PF02601 Exonuclease VII, large subunit DNA52_RS05160 PF02609 Exonuclease VII small subunit DNA52_RS05165 PF00348 Polyprenyl synthetase DNA52_RS05170 PF01479 S4 domain DNA52_RS05170 PF01728 FtsJ-like methyltransferase DNA52_RS05175 PF02863 Arginine repressor, C-terminal domain DNA52_RS05175 PF01316 Arginine repressor, DNA binding domain DNA52_RS05180 PF13476 AAA domain DNA52_RS05185 PF00571 CBS domain DNA52_RS05185 PF00005 ABC transporter DNA52_RS05190 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS05195 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DNA52_RS05200 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS05210 PF00625 Guanylate kinase DNA52_RS05215 PF01192 RNA polymerase Rpb6 DNA52_RS05220 PF04127 DNA / pantothenate metabolism flavoprotein DNA52_RS05220 PF02441 Flavoprotein DNA52_RS05225 PF04851 Type III restriction enzyme, res subunit DNA52_RS05225 PF00271 Helicase conserved C-terminal domain DNA52_RS05225 PF17764 3′ DNA-binding domain (3′BD) DNA52_RS05225 PF18074 Primosomal protein N C-terminal domain DNA52_RS05225 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DNA52_RS05230 PF02911 Formyl transferase, C-terminal domain DNA52_RS05230 PF00551 Formyl transferase DNA52_RS05235 PF01029 NusB family DNA52_RS05235 PF01189 16S rRNA methyltransferase RsmB/F DNA52_RS05245 PF00069 Protein kinase domain DNA52_RS05245 PF03793 PASTA domain DNA52_RS05250 PF16745 RsgA N-terminal domain DNA52_RS05250 PF03193 RsgA GTPase DNA52_RS05255 PF00834 Ribulose-phosphate 3 epimerase family DNA52_RS05260 PF04263 Thiamin pyrophosphokinase, catalytic domain DNA52_RS05260 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain DNA52_RS05270 PF00830 Ribosomal L28 family DNA52_RS05275 PF03780 Asp23 family, cell envelope-related function DNA52_RS05280 PF13684 Dihydroxyacetone kinase family DNA52_RS05280 PF02734 DAK2 domain DNA52_RS05285 PF00270 DEAD/DEAH box helicase DNA52_RS05285 PF00271 Helicase conserved C-terminal domain DNA52_RS05285 PF17191 RecG wedge domain DNA52_RS05290 PF02504 Fatty acid synthesis protein DNA52_RS05295 PF00550 Phosphopantetheine attachment site DNA52_RS05300 PF00035 Double-stranded RNA binding motif DNA52_RS05300 PF14622 Ribonuclease-III-like DNA52_RS05305 PF02463 RecF/RecN/SMC N terminal domain DNA52_RS05305 PF06470 SMC proteins Flexible Hinge Domain DNA52_RS05310 PF02881 SRP54-type protein, helical bundle domain DNA52_RS05310 PF00448 SRP54-type protein, GTPase domain DNA52_RS05315 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DNA52_RS05320 PF02978 Signal peptide binding domain DNA52_RS05320 PF02881 SRP54-type protein, helical bundle domain DNA52_RS05320 PF00448 SRP54-type protein, GTPase domain DNA52_RS05325 PF00886 Ribosomal protein S16 DNA52_RS05335 PF05239 PRC-barrel domain DNA52_RS05335 PF01782 RimM N-terminal domain DNA52_RS05340 PF01746 tRNA (Guanine-1)-methyltransferase DNA52_RS05345 PF01245 Ribosomal protein L19 DNA52_RS05365 PF00005 ABC transporter DNA52_RS05375 PF04715 Anthranilate synthase component I, N terminal region DNA52_RS05375 PF00425 chorismate binding enzyme DNA52_RS05380 PF00117 Glutamine amidotransferase class-I DNA52_RS05380 PF02885 Glycosyl transferase family, helical bundle domain DNA52_RS05380 PF00591 Glycosyl transferase family, a/b domain DNA52_RS05385 PF00591 Glycosyl transferase family, a/b domain DNA52_RS05385 PF02885 Glycosyl transferase family, helical bundle domain DNA52_RS05390 PF00218 Indole-3-glycerol phosphate synthase DNA52_RS05395 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DNA52_RS05400 PF00291 Pyridoxal-phosphate dependent enzyme DNA52_RS05405 PF00290 Tryptophan synthase alpha chain DNA52_RS05430 PF07687 Peptidase dimerisation domain DNA52_RS05430 PF01546 Peptidase family M20/M25/M40 DNA52_RS05435 PF00107 Zinc-binding dehydrogenase DNA52_RS05435 PF08240 Alcohol dehydrogenase GroES-like domain DNA52_RS05445 PF00106 short chain dehydrogenase DNA52_RS05455 PF07977 FabA-like domain DNA52_RS05460 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DNA52_RS05460 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DNA52_RS05465 PF00550 Phosphopantetheine attachment site DNA52_RS05470 PF00698 Acyl transferase domain DNA52_RS05480 PF00109 Beta-ketoacyl synthase, N-terminal domain DNA52_RS05480 PF02801 Beta-ketoacyl synthase, C-terminal domain DNA52_RS05485 PF00364 Biotin-requiring enzyme DNA52_RS05490 PF07977 FabA-like domain DNA52_RS05495 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DNA52_RS05495 PF02785 Biotin carboxylase C-terminal domain DNA52_RS05495 PF00289 Biotin carboxylase, N-terminal domain DNA52_RS05500 PF01039 Carboxyl transferase domain DNA52_RS05505 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DNA52_RS05520 PF04474 Protein of unknown function (DUF554) DNA52_RS05525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNA52_RS05525 PF03466 LysR substrate binding domain DNA52_RS05530 PF03061 Thioesterase superfamily DNA52_RS05535 PF03193 RsgA GTPase DNA52_RS05545 PF07690 Major Facilitator Superfamily DNA52_RS05555 PF00589 Phage integrase family DNA52_RS05555 PF14659 Phage integrase, N-terminal SAM-like domain DNA52_RS05560 PF00145 C-5 cytosine-specific DNA methylase DNA52_RS05605 PF01381 Helix-turn-helix DNA52_RS05700 PF01381 Helix-turn-helix DNA52_RS05720 PF04466 Phage terminase large subunit DNA52_RS05720 PF17288 Terminase RNAseH like domain DNA52_RS05820 PF01476 LysM domain DNA52_RS05820 PF05257 CHAP domain DNA52_RS05845 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DNA52_RS05850 PF00583 Acetyltransferase (GNAT) family DNA52_RS05910 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DNA52_RS05925 PF03073 TspO/MBR family DNA52_RS05935 PF05656 Protein of unknown function (DUF805) DNA52_RS05940 PF00781 Diacylglycerol kinase catalytic domain DNA52_RS05955 PF04226 Transglycosylase associated protein DNA52_RS05960 PF05532 CsbD-like DNA52_RS05970 PF03577 Peptidase family C69 DNA52_RS05975 PF01361 Tautomerase enzyme DNA52_RS05980 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DNA52_RS05980 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DNA52_RS06010 PF00202 Aminotransferase class-III DNA52_RS06015 PF13520 Amino acid permease DNA52_RS06025 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DNA52_RS06025 PF01189 16S rRNA methyltransferase RsmB/F DNA52_RS06025 PF17126 RsmF rRNA methyltransferase first C-terminal domain DNA52_RS06040 PF03636 Glycosyl hydrolase family 65, N-terminal domain DNA52_RS06040 PF03633 Glycosyl hydrolase family 65, C-terminal domain DNA52_RS06040 PF03632 Glycosyl hydrolase family 65 central catalytic domain DNA52_RS06045 PF01263 Aldose 1-epimerase DNA52_RS06050 PF01070 FMN-dependent dehydrogenase DNA52_RS06055 PF00288 GHMP kinases N terminal domain DNA52_RS06055 PF08544 GHMP kinases C terminal DNA52_RS06065 PF00288 GHMP kinases N terminal domain DNA52_RS06075 PF00929 Exonuclease DNA52_RS06075 PF13307 Helicase C-terminal domain DNA52_RS06075 PF04851 Type III restriction enzyme, res subunit DNA52_RS06085 PF00155 Aminotransferase class I and II DNA52_RS06090 PF01336 OB-fold nucleic acid binding domain DNA52_RS06090 PF00152 tRNA synthetases class II (D, K and N) DNA52_RS06105 PF00005 ABC transporter DNA52_RS06105 PF09383 NIL domain DNA52_RS06110 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS06115 PF03180 NLPA lipoprotein DNA52_RS06125 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS06130 PF01547 Bacterial extracellular solute-binding protein DNA52_RS06140 PF00912 Transglycosylase DNA52_RS06140 PF00905 Penicillin binding protein transpeptidase domain DNA52_RS06145 PF03838 Recombination protein U DNA52_RS06150 PF06908 YspA SLOG family DNA52_RS06155 PF05103 DivIVA protein DNA52_RS06165 PF01170 Putative RNA methylase family UPF0020 DNA52_RS06165 PF02926 THUMP domain DNA52_RS06170 PF00326 Prolyl oligopeptidase family DNA52_RS06180 PF00535 Glycosyl transferase family 2 DNA52_RS06200 PF02016 LD-carboxypeptidase N-terminal domain DNA52_RS06200 PF17676 LD-carboxypeptidase C-terminal domain DNA52_RS06210 PF00005 ABC transporter DNA52_RS06225 PF01266 FAD dependent oxidoreductase DNA52_RS06240 PF01268 Formate--tetrahydrofolate ligase DNA52_RS06245 PF01252 Signal peptidase (SPase) II DNA52_RS06250 PF01479 S4 domain DNA52_RS06250 PF00849 RNA pseudouridylate synthase DNA52_RS06255 PF00156 Phosphoribosyl transferase domain DNA52_RS06260 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DNA52_RS06260 PF00117 Glutamine amidotransferase class-I DNA52_RS06265 PF02142 MGS-like domain DNA52_RS06265 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DNA52_RS06265 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DNA52_RS06275 PF00300 Histidine phosphatase superfamily (branch 1) DNA52_RS06280 PF08818 Domain of unknown function (DU1801) DNA52_RS06305 PF00005 ABC transporter DNA52_RS06310 PF12679 ABC-2 family transporter protein DNA52_RS06315 PF05670 NFACT protein RNA binding domain DNA52_RS06325 PF02645 Uncharacterised protein, DegV family COG1307 DNA52_RS06385 PF00324 Amino acid permease DNA52_RS06395 PF07690 Major Facilitator Superfamily DNA52_RS06410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNA52_RS06410 PF03466 LysR substrate binding domain DNA52_RS06415 PF01717 Cobalamin-independent synthase, Catalytic domain DNA52_RS06425 PF01926 50S ribosome-binding GTPase DNA52_RS06430 PF01351 Ribonuclease HII DNA52_RS06435 PF18255 DNA processing protein A sterile alpha motif domain DNA52_RS06435 PF02481 DNA recombination-mediator protein A DNA52_RS06440 PF01396 Topoisomerase DNA binding C4 zinc finger DNA52_RS06440 PF01751 Toprim domain DNA52_RS06440 PF01131 DNA topoisomerase DNA52_RS06445 PF01134 Glucose inhibited division protein A DNA52_RS06450 PF02899 Phage integrase, N-terminal SAM-like domain DNA52_RS06450 PF00589 Phage integrase family DNA52_RS06455 PF00227 Proteasome subunit DNA52_RS06460 PF00004 ATPase family associated with various cellular activities (AAA) DNA52_RS06460 PF07724 AAA domain (Cdc48 subfamily) DNA52_RS06460 PF10431 C-terminal, D2-small domain, of ClpB protein DNA52_RS06465 PF01263 Aldose 1-epimerase DNA52_RS06470 PF02660 Glycerol-3-phosphate acyltransferase DNA52_RS06475 PF00204 DNA gyrase B DNA52_RS06475 PF00986 DNA gyrase B subunit, carboxyl terminus DNA52_RS06475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNA52_RS06475 PF01751 Toprim domain DNA52_RS06480 PF03989 DNA gyrase C-terminal domain, beta-propeller DNA52_RS06480 PF00521 DNA gyrase/topoisomerase IV, subunit A DNA52_RS06485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNA52_RS06485 PF03466 LysR substrate binding domain DNA52_RS06490 PF02833 DHHA2 domain DNA52_RS06490 PF01368 DHH family DNA52_RS06495 PF01641 SelR domain DNA52_RS06500 PF01625 Peptide methionine sulfoxide reductase DNA52_RS06530 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNA52_RS06530 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNA52_RS06535 PF01047 MarR family DNA52_RS06540 PF13673 Acetyltransferase (GNAT) domain DNA52_RS06545 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DNA52_RS06550 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DNA52_RS06555 PF16912 Glucose dehydrogenase C-terminus DNA52_RS06555 PF08240 Alcohol dehydrogenase GroES-like domain DNA52_RS06560 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DNA52_RS06570 PF02652 L-lactate permease DNA52_RS06590 PF03572 Peptidase family S41 DNA52_RS06590 PF01471 Putative peptidoglycan binding domain DNA52_RS06590 PF17820 PDZ domain DNA52_RS06595 PF06855 YozE SAM-like fold DNA52_RS06600 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) DNA52_RS06605 PF13472 GDSL-like Lipase/Acylhydrolase family DNA52_RS06610 PF02645 Uncharacterised protein, DegV family COG1307 DNA52_RS06615 PF00186 Dihydrofolate reductase DNA52_RS06620 PF00303 Thymidylate synthase DNA52_RS06625 PF00005 ABC transporter DNA52_RS06625 PF16326 ABC transporter C-terminal domain DNA52_RS06625 PF12848 ABC transporter DNA52_RS06635 PF13735 tRNA nucleotidyltransferase domain 2 putative DNA52_RS06635 PF01743 Poly A polymerase head domain DNA52_RS06635 PF12627 Probable RNA and SrmB- binding site of polymerase A DNA52_RS06640 PF05173 Dihydrodipicolinate reductase, C-terminus DNA52_RS06640 PF01113 Dihydrodipicolinate reductase, N-terminus DNA52_RS06655 PF00216 Bacterial DNA-binding protein DNA52_RS06665 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DNA52_RS06665 PF01926 50S ribosome-binding GTPase DNA52_RS06670 PF00575 S1 RNA binding domain DNA52_RS06675 PF02224 Cytidylate kinase DNA52_RS06685 PF00270 DEAD/DEAH box helicase DNA52_RS06685 PF00271 Helicase conserved C-terminal domain DNA52_RS06695 PF12822 ECF transporter, substrate-specific component DNA52_RS06700 PF00849 RNA pseudouridylate synthase DNA52_RS06700 PF01479 S4 domain DNA52_RS06705 PF04079 Segregation and condensation complex subunit ScpB DNA52_RS06710 PF02616 Segregation and condensation protein ScpA DNA52_RS06715 PF00583 Acetyltransferase (GNAT) family DNA52_RS06720 PF02899 Phage integrase, N-terminal SAM-like domain DNA52_RS06720 PF00589 Phage integrase family DNA52_RS06725 PF13509 S1 domain DNA52_RS06725 PF17783 CvfB-like winged helix domain DNA52_RS06730 PF04284 Protein of unknown function (DUF441) DNA52_RS06740 PF00391 PEP-utilising enzyme, mobile domain DNA52_RS06740 PF00224 Pyruvate kinase, barrel domain DNA52_RS06740 PF02887 Pyruvate kinase, alpha/beta domain DNA52_RS06745 PF00365 Phosphofructokinase DNA52_RS06750 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DNA52_RS06750 PF14579 Helix-hairpin-helix motif DNA52_RS06750 PF02811 PHP domain DNA52_RS06750 PF01336 OB-fold nucleic acid binding domain DNA52_RS06750 PF07733 Bacterial DNA polymerase III alpha NTPase domain DNA52_RS06760 PF00004 ATPase family associated with various cellular activities (AAA) DNA52_RS06760 PF07724 AAA domain (Cdc48 subfamily) DNA52_RS06760 PF17871 AAA lid domain DNA52_RS06760 PF02861 Clp amino terminal domain, pathogenicity island component DNA52_RS06760 PF10431 C-terminal, D2-small domain, of ClpB protein DNA52_RS06765 PF07687 Peptidase dimerisation domain DNA52_RS06765 PF01546 Peptidase family M20/M25/M40 DNA52_RS06770 PF01784 NIF3 (NGG1p interacting factor 3) DNA52_RS06775 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DNA52_RS06785 PF01061 ABC-2 type transporter DNA52_RS06790 PF13732 Domain of unknown function (DUF4162) DNA52_RS06790 PF00005 ABC transporter DNA52_RS06800 PF02896 PEP-utilising enzyme, TIM barrel domain DNA52_RS06800 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DNA52_RS06800 PF00391 PEP-utilising enzyme, mobile domain DNA52_RS06810 PF01047 MarR family DNA52_RS06830 PF00403 Heavy-metal-associated domain DNA52_RS06835 PF00113 Enolase, C-terminal TIM barrel domain DNA52_RS06835 PF03952 Enolase, N-terminal domain DNA52_RS06840 PF07690 Major Facilitator Superfamily DNA52_RS06850 PF07687 Peptidase dimerisation domain DNA52_RS06850 PF01546 Peptidase family M20/M25/M40 DNA52_RS06855 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNA52_RS06855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNA52_RS06860 PF08220 DeoR-like helix-turn-helix domain DNA52_RS06860 PF00455 DeoR C terminal sensor domain DNA52_RS06870 PF03960 ArsC family DNA52_RS06890 PF13419 Haloacid dehalogenase-like hydrolase DNA52_RS06895 PF12464 Maltose acetyltransferase DNA52_RS06895 PF00132 Bacterial transferase hexapeptide (six repeats) DNA52_RS06895 PF14602 Hexapeptide repeat of succinyl-transferase DNA52_RS06900 PF01418 Helix-turn-helix domain, rpiR family DNA52_RS06900 PF01380 SIS domain DNA52_RS06920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNA52_RS06920 PF03466 LysR substrate binding domain DNA52_RS06925 PF08240 Alcohol dehydrogenase GroES-like domain DNA52_RS06925 PF00107 Zinc-binding dehydrogenase DNA52_RS06935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNA52_RS06935 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNA52_RS06940 PF00196 Bacterial regulatory proteins, luxR family DNA52_RS06940 PF00072 Response regulator receiver domain DNA52_RS06945 PF07730 Histidine kinase DNA52_RS06955 PF00005 ABC transporter DNA52_RS06965 PF13673 Acetyltransferase (GNAT) domain DNA52_RS06965 PF03352 Methyladenine glycosylase DNA52_RS06965 PF00117 Glutamine amidotransferase class-I DNA52_RS06965 PF00958 GMP synthase C terminal domain DNA52_RS06965 PF13302 Acetyltransferase (GNAT) domain DNA52_RS06980 PF00005 ABC transporter DNA52_RS07000 PF00005 ABC transporter DNA52_RS07005 PF00392 Bacterial regulatory proteins, gntR family DNA52_RS07015 PF00140 Sigma-70 factor, region 1.2 DNA52_RS07015 PF04545 Sigma-70, region 4 DNA52_RS07015 PF04539 Sigma-70 region 3 DNA52_RS07015 PF03979 Sigma-70 factor, region 1.1 DNA52_RS07015 PF04542 Sigma-70 region 2 DNA52_RS07020 PF08275 DNA primase catalytic core, N-terminal domain DNA52_RS07020 PF10410 DnaB-helicase binding domain of primase DNA52_RS07020 PF01807 CHC2 zinc finger DNA52_RS07025 PF02092 Glycyl-tRNA synthetase beta subunit DNA52_RS07030 PF02091 Glycyl-tRNA synthetase alpha subunit DNA52_RS07035 PF11967 Recombination protein O N terminal DNA52_RS07035 PF02565 Recombination protein O C terminal DNA52_RS07040 PF07650 KH domain DNA52_RS07040 PF01926 50S ribosome-binding GTPase DNA52_RS07045 PF01219 Prokaryotic diacylglycerol kinase DNA52_RS07050 PF02130 Uncharacterized protein family UPF0054 DNA52_RS07055 PF02562 PhoH-like protein DNA52_RS07060 PF09424 Yqey-like protein DNA52_RS07065 PF01165 Ribosomal protein S21 DNA52_RS07070 PF03618 Kinase/pyrophosphorylase DNA52_RS07080 PF01261 Xylose isomerase-like TIM barrel DNA52_RS07085 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DNA52_RS07090 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DNA52_RS07090 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DNA52_RS07095 PF01625 Peptide methionine sulfoxide reductase DNA52_RS07100 PF02938 GAD domain DNA52_RS07100 PF01336 OB-fold nucleic acid binding domain DNA52_RS07100 PF00152 tRNA synthetases class II (D, K and N) DNA52_RS07105 PF13393 Histidyl-tRNA synthetase DNA52_RS07105 PF03129 Anticodon binding domain DNA52_RS07110 PF01520 N-acetylmuramoyl-L-alanine amidase DNA52_RS07110 PF08239 Bacterial SH3 domain DNA52_RS07115 PF03881 Fructosamine kinase DNA52_RS07120 PF13419 Haloacid dehalogenase-like hydrolase DNA52_RS07125 PF02580 D-Tyr-tRNA(Tyr) deacylase DNA52_RS07130 PF13291 ACT domain DNA52_RS07130 PF04607 Region found in RelA / SpoT proteins DNA52_RS07130 PF02824 TGS domain DNA52_RS07140 PF04452 RNA methyltransferase DNA52_RS07150 PF02245 Methylpurine-DNA glycosylase (MPG) DNA52_RS07165 PF00679 Elongation factor G C-terminus DNA52_RS07165 PF03144 Elongation factor Tu domain 2 DNA52_RS07165 PF00009 Elongation factor Tu GTP binding domain DNA52_RS07165 PF06421 GTP-binding protein LepA C-terminus DNA52_RS07170 PF04914 DltD protein DNA52_RS07175 PF00550 Phosphopantetheine attachment site DNA52_RS07180 PF03062 MBOAT, membrane-bound O-acyltransferase family DNA52_RS07185 PF13193 AMP-binding enzyme C-terminal domain DNA52_RS07185 PF00501 AMP-binding enzyme DNA52_RS07195 PF00144 Beta-lactamase DNA52_RS07195 PF11954 Domain of unknown function (DUF3471) DNA52_RS07200 PF01556 DnaJ C terminal domain DNA52_RS07200 PF00684 DnaJ central domain DNA52_RS07200 PF00226 DnaJ domain DNA52_RS07205 PF00012 Hsp70 protein DNA52_RS07210 PF01025 GrpE DNA52_RS07215 PF01628 HrcA protein C terminal domain DNA52_RS07215 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DNA52_RS07220 PF03306 Alpha-acetolactate decarboxylase DNA52_RS07225 PF01687 Riboflavin kinase DNA52_RS07225 PF06574 FAD synthetase DNA52_RS07230 PF01509 TruB family pseudouridylate synthase (N terminal domain) DNA52_RS07230 PF16198 tRNA pseudouridylate synthase B C-terminal domain DNA52_RS07235 PF01202 Shikimate kinase DNA52_RS07240 PF01842 ACT domain DNA52_RS07240 PF02153 Prephenate dehydrogenase DNA52_RS07245 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DNA52_RS07255 PF01264 Chorismate synthase DNA52_RS07260 PF07690 Major Facilitator Superfamily DNA52_RS07265 PF02033 Ribosome-binding factor A DNA52_RS07270 PF04760 Translation initiation factor IF-2, N-terminal region DNA52_RS07270 PF11987 Translation-initiation factor 2 DNA52_RS07270 PF00009 Elongation factor Tu GTP binding domain DNA52_RS07275 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DNA52_RS07280 PF04296 Protein of unknown function (DUF448) DNA52_RS07285 PF08529 NusA N-terminal domain DNA52_RS07285 PF13184 NusA-like KH domain DNA52_RS07285 PF00575 S1 RNA binding domain DNA52_RS07290 PF17384 RimP C-terminal SH3 domain DNA52_RS07290 PF02576 RimP N-terminal domain DNA52_RS07295 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DNA52_RS07295 PF07733 Bacterial DNA polymerase III alpha NTPase domain DNA52_RS07295 PF14579 Helix-hairpin-helix motif DNA52_RS07295 PF02811 PHP domain DNA52_RS07295 PF00929 Exonuclease DNA52_RS07295 PF14480 DNA polymerase III polC-type N-terminus I DNA52_RS07295 PF11490 DNA polymerase III polC-type N-terminus II DNA52_RS07300 PF04073 Aminoacyl-tRNA editing domain DNA52_RS07300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DNA52_RS07300 PF03129 Anticodon binding domain DNA52_RS07305 PF17820 PDZ domain DNA52_RS07305 PF02163 Peptidase family M50 DNA52_RS07315 PF01255 Putative undecaprenyl diphosphate synthase DNA52_RS07320 PF01765 Ribosome recycling factor DNA52_RS07325 PF00696 Amino acid kinase family DNA52_RS07330 PF00889 Elongation factor TS DNA52_RS07335 PF00318 Ribosomal protein S2 DNA52_RS07345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNA52_RS07345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DNA52_RS07350 PF01541 GIY-YIG catalytic domain DNA52_RS07355 PF05175 Methyltransferase small domain DNA52_RS07360 PF01553 Acyltransferase DNA52_RS07365 PF03672 Uncharacterised protein family (UPF0154) DNA52_RS07370 PF05979 Bacterial protein of unknown function (DUF896) DNA52_RS07375 PF01726 LexA DNA binding domain DNA52_RS07375 PF00717 Peptidase S24-like DNA52_RS07390 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal DNA52_RS07390 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal DNA52_RS07405 PF00535 Glycosyl transferase family 2 DNA52_RS07415 PF03816 Cell envelope-related transcriptional attenuator domain DNA52_RS07420 PF00005 ABC transporter DNA52_RS07430 PF01098 Cell cycle protein DNA52_RS07450 PF01906 Putative heavy-metal-binding DNA52_RS07465 PF00156 Phosphoribosyl transferase domain DNA52_RS07470 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DNA52_RS07470 PF17768 RecJ OB domain DNA52_RS07470 PF02272 DHHA1 domain DNA52_RS07470 PF01368 DHH family DNA52_RS07475 PF06305 Lipopolysaccharide assembly protein A domain DNA52_RS07480 PF00106 short chain dehydrogenase DNA52_RS07485 PF12706 Beta-lactamase superfamily domain DNA52_RS07485 PF00753 Metallo-beta-lactamase superfamily DNA52_RS07495 PF01926 50S ribosome-binding GTPase DNA52_RS07495 PF01018 GTP1/OBG DNA52_RS07495 PF09269 Domain of unknown function (DUF1967) DNA52_RS07500 PF00455 DeoR C terminal sensor domain DNA52_RS07500 PF08220 DeoR-like helix-turn-helix domain DNA52_RS07505 PF00294 pfkB family carbohydrate kinase DNA52_RS07510 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DNA52_RS07510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DNA52_RS07515 PF00149 Calcineurin-like phosphoesterase DNA52_RS07525 PF00535 Glycosyl transferase family 2 DNA52_RS07540 PF00534 Glycosyl transferases group 1 DNA52_RS07540 PF13439 Glycosyltransferase Family 4 DNA52_RS07545 PF02397 Bacterial sugar transferase DNA52_RS07550 PF01370 NAD dependent epimerase/dehydratase family DNA52_RS07560 PF13614 AAA domain DNA52_RS07570 PF02151 UvrB/uvrC motif DNA52_RS07570 PF01541 GIY-YIG catalytic domain DNA52_RS07570 PF08459 UvrC Helix-hairpin-helix N-terminal DNA52_RS07575 PF00005 ABC transporter DNA52_RS07580 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS07600 PF01926 50S ribosome-binding GTPase DNA52_RS07605 PF07724 AAA domain (Cdc48 subfamily) DNA52_RS07605 PF06689 ClpX C4-type zinc finger DNA52_RS07605 PF10431 C-terminal, D2-small domain, of ClpB protein DNA52_RS07610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DNA52_RS07610 PF05697 Bacterial trigger factor protein (TF) DNA52_RS07610 PF05698 Bacterial trigger factor protein (TF) C-terminus DNA52_RS07615 PF03143 Elongation factor Tu C-terminal domain DNA52_RS07615 PF00009 Elongation factor Tu GTP binding domain DNA52_RS07615 PF03144 Elongation factor Tu domain 2 DNA52_RS07625 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DNA52_RS07625 PF17770 Ribonuclease J C-terminal domain DNA52_RS07625 PF00753 Metallo-beta-lactamase superfamily DNA52_RS07630 PF00701 Dihydrodipicolinate synthetase family DNA52_RS07635 PF07690 Major Facilitator Superfamily DNA52_RS07640 PF00312 Ribosomal protein S15 DNA52_RS07645 PF01649 Ribosomal protein S20 DNA52_RS07650 PF06144 DNA polymerase III, delta subunit DNA52_RS07655 PF00753 Metallo-beta-lactamase superfamily DNA52_RS07655 PF03772 Competence protein DNA52_RS07655 PF13567 Domain of unknown function (DUF4131) DNA52_RS07660 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DNA52_RS07665 PF10531 SLBB domain DNA52_RS07670 PF05362 Lon protease (S16) C-terminal proteolytic domain DNA52_RS07670 PF13180 PDZ domain DNA52_RS07675 PF01467 Cytidylyltransferase-like DNA52_RS07685 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) DNA52_RS07690 PF02785 Biotin carboxylase C-terminal domain DNA52_RS07690 PF00289 Biotin carboxylase, N-terminal domain DNA52_RS07690 PF00364 Biotin-requiring enzyme DNA52_RS07690 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DNA52_RS07690 PF00682 HMGL-like DNA52_RS07690 PF02436 Conserved carboxylase domain DNA52_RS07695 PF01098 Cell cycle protein DNA52_RS07705 PF00535 Glycosyl transferase family 2 DNA52_RS07705 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 DNA52_RS07730 PF14492 Elongation Factor G, domain II DNA52_RS07730 PF00679 Elongation factor G C-terminus DNA52_RS07730 PF03144 Elongation factor Tu domain 2 DNA52_RS07730 PF00009 Elongation factor Tu GTP binding domain DNA52_RS07735 PF00459 Inositol monophosphatase family DNA52_RS07740 PF05256 Uncharacterised protein family (UPF0223) DNA52_RS07745 PF00056 lactate/malate dehydrogenase, NAD binding domain DNA52_RS07745 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DNA52_RS07750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNA52_RS07750 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNA52_RS07755 PF02817 e3 binding domain DNA52_RS07755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DNA52_RS07755 PF00364 Biotin-requiring enzyme DNA52_RS07760 PF02780 Transketolase, C-terminal domain DNA52_RS07760 PF02779 Transketolase, pyrimidine binding domain DNA52_RS07765 PF00676 Dehydrogenase E1 component DNA52_RS07770 PF01327 Polypeptide deformylase DNA52_RS07780 PF07288 Protein of unknown function (DUF1447) DNA52_RS07785 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DNA52_RS07785 PF17770 Ribonuclease J C-terminal domain DNA52_RS07785 PF00753 Metallo-beta-lactamase superfamily DNA52_RS07790 PF00781 Diacylglycerol kinase catalytic domain DNA52_RS07800 PF06725 3D domain DNA52_RS07800 PF01476 LysM domain DNA52_RS07805 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DNA52_RS07805 PF14572 Phosphoribosyl synthetase-associated domain DNA52_RS07810 PF13538 UvrD-like helicase C-terminal domain DNA52_RS07810 PF14490 Helix-hairpin-helix containing domain DNA52_RS07810 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DNA52_RS07820 PF00300 Histidine phosphatase superfamily (branch 1) DNA52_RS07845 PF02080 TrkA-C domain DNA52_RS07845 PF02254 TrkA-N domain DNA52_RS07850 PF02386 Cation transport protein DNA52_RS07865 PF00266 Aminotransferase class-V DNA52_RS07870 PF01048 Phosphorylase superfamily DNA52_RS07880 PF00293 NUDIX domain DNA52_RS07885 PF01678 Diaminopimelate epimerase DNA52_RS07895 PF00072 Response regulator receiver domain DNA52_RS07895 PF04397 LytTr DNA-binding domain DNA52_RS07905 PF00005 ABC transporter DNA52_RS07910 PF08264 Anticodon-binding domain of tRNA DNA52_RS07910 PF00133 tRNA synthetases class I (I, L, M and V) DNA52_RS07910 PF06827 Zinc finger found in FPG and IleRS DNA52_RS07915 PF05103 DivIVA protein DNA52_RS07925 PF02325 YGGT family DNA52_RS07930 PF04472 Cell division protein SepF DNA52_RS07935 PF12327 FtsZ family, C-terminal domain DNA52_RS07935 PF00091 Tubulin/FtsZ family, GTPase domain DNA52_RS07940 PF02491 SHS2 domain inserted in FTSA DNA52_RS07940 PF11983 Membrane-attachment and polymerisation-promoting switch DNA52_RS07945 PF03799 Cell division protein FtsQ DNA52_RS07945 PF08478 POTRA domain, FtsQ-type DNA52_RS07950 PF03033 Glycosyltransferase family 28 N-terminal domain DNA52_RS07950 PF04101 Glycosyltransferase family 28 C-terminal domain DNA52_RS07955 PF08245 Mur ligase middle domain DNA52_RS07955 PF02875 Mur ligase family, glutamate ligase domain DNA52_RS07960 PF00953 Glycosyl transferase family 4 DNA52_RS07960 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DNA52_RS07965 PF03717 Penicillin-binding Protein dimerisation domain DNA52_RS07965 PF00905 Penicillin binding protein transpeptidase domain DNA52_RS07965 PF03793 PASTA domain DNA52_RS07975 PF01795 MraW methylase family DNA52_RS07980 PF02381 MraZ protein, putative antitoxin-like DNA52_RS08000 PF17854 FtsK alpha domain DNA52_RS08000 PF01580 FtsK/SpoIIIE family DNA52_RS08000 PF09397 Ftsk gamma domain DNA52_RS08005 PF00588 SpoU rRNA Methylase family DNA52_RS08015 PF05525 Branched-chain amino acid transport protein DNA52_RS08030 PF00253 Ribosomal protein S14p/S29e DNA52_RS08035 PF01594 AI-2E family transporter DNA52_RS08045 PF10282 Lactonase, 7-bladed beta-propeller DNA52_RS08050 PF03932 CutC family DNA52_RS08055 PF00849 RNA pseudouridylate synthase DNA52_RS08060 PF01513 ATP-NAD kinase DNA52_RS08065 PF04607 Region found in RelA / SpoT proteins DNA52_RS08075 PF01432 Peptidase family M3 DNA52_RS08075 PF08439 Oligopeptidase F DNA52_RS08085 PF05389 Negative regulator of genetic competence (MecA) DNA52_RS08090 PF03960 ArsC family DNA52_RS08095 PF12706 Beta-lactamase superfamily domain DNA52_RS08240 PF00575 S1 RNA binding domain DNA52_RS08245 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DNA52_RS08250 PF09335 SNARE associated Golgi protein DNA52_RS08260 PF13344 Haloacid dehalogenase-like hydrolase DNA52_RS08265 PF06265 Protein of unknown function (DUF1027) DNA52_RS08270 PF02872 5'-nucleotidase, C-terminal domain DNA52_RS08285 PF00324 Amino acid permease DNA52_RS08290 PF00871 Acetokinase family DNA52_RS08295 PF02384 N-6 DNA Methylase DNA52_RS08325 PF00437 Type II/IV secretion system protein DNA52_RS08330 PF00294 pfkB family carbohydrate kinase DNA52_RS08330 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DNA52_RS08335 PF01709 Transcriptional regulator DNA52_RS08350 PF00356 Bacterial regulatory proteins, lacI family DNA52_RS08355 PF00557 Metallopeptidase family M24 DNA52_RS08355 PF01321 Creatinase/Prolidase N-terminal domain DNA52_RS08360 PF13411 MerR HTH family regulatory protein DNA52_RS08375 PF00924 Mechanosensitive ion channel DNA52_RS08380 PF01546 Peptidase family M20/M25/M40 DNA52_RS08380 PF07687 Peptidase dimerisation domain DNA52_RS08385 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal DNA52_RS08385 PF00132 Bacterial transferase hexapeptide (six repeats) DNA52_RS08385 PF14602 Hexapeptide repeat of succinyl-transferase DNA52_RS08400 PF01725 Ham1 family DNA52_RS08405 PF01177 Asp/Glu/Hydantoin racemase DNA52_RS08410 PF10702 Protein of unknown function (DUF2507) DNA52_RS08415 PF00085 Thioredoxin DNA52_RS08420 PF00488 MutS domain V DNA52_RS08420 PF01713 Smr domain DNA52_RS08430 PF06949 Protein of unknown function (DUF1292) DNA52_RS08435 PF03652 Holliday junction resolvase DNA52_RS08440 PF06135 IreB regulatory phosphoprotein DNA52_RS08445 PF02272 DHHA1 domain DNA52_RS08445 PF01411 tRNA synthetases class II (A) DNA52_RS08445 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DNA52_RS08450 PF00270 DEAD/DEAH box helicase DNA52_RS08450 PF00271 Helicase conserved C-terminal domain DNA52_RS08455 PF01368 DHH family DNA52_RS08455 PF02272 DHHA1 domain DNA52_RS08460 PF11799 impB/mucB/samB family C-terminal domain DNA52_RS08460 PF00817 impB/mucB/samB family DNA52_RS08465 PF02699 Preprotein translocase subunit DNA52_RS08470 PF01702 Queuine tRNA-ribosyltransferase DNA52_RS08475 PF02547 Queuosine biosynthesis protein DNA52_RS08480 PF05491 RuvB C-terminal winged helix domain DNA52_RS08480 PF17864 RuvB AAA lid domain DNA52_RS08480 PF05496 Holliday junction DNA helicase RuvB P-loop domain DNA52_RS08485 PF01330 RuvA N terminal domain DNA52_RS08485 PF07499 RuvA, C-terminal domain DNA52_RS08515 PF01119 DNA mismatch repair protein, C-terminal domain DNA52_RS08515 PF08676 MutL C terminal dimerisation domain DNA52_RS08520 PF05190 MutS family domain IV DNA52_RS08520 PF00488 MutS domain V DNA52_RS08520 PF05192 MutS domain III DNA52_RS08520 PF01624 MutS domain I DNA52_RS08520 PF05188 MutS domain II DNA52_RS08525 PF13277 YmdB-like protein DNA52_RS08530 PF01966 HD domain DNA52_RS08530 PF00013 KH domain DNA52_RS08530 PF12072 Domain of unknown function (DUF3552) DNA52_RS08535 PF00154 recA bacterial DNA recombination protein DNA52_RS08540 PF00994 Probable molybdopterin binding domain DNA52_RS08540 PF18146 Damage-inducible protein CinA KH domain DNA52_RS08540 PF02464 Competence-damaged protein DNA52_RS08545 PF01066 CDP-alcohol phosphatidyltransferase DNA52_RS08550 PF13464 Domain of unknown function (DUF4115) DNA52_RS08555 PF05193 Peptidase M16 inactive domain DNA52_RS08555 PF00675 Insulinase (Peptidase family M16) DNA52_RS08560 PF05193 Peptidase M16 inactive domain DNA52_RS08565 PF13840 ACT domain DNA52_RS08565 PF00696 Amino acid kinase family DNA52_RS08575 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNA52_RS08580 PF00005 ABC transporter DNA52_RS08585 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS08590 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DNA52_RS08595 PF03775 Septum formation inhibitor MinC, C-terminal domain DNA52_RS08605 PF04085 rod shape-determining protein MreC DNA52_RS08615 PF04002 RadC-like JAB domain DNA52_RS08620 PF02875 Mur ligase family, glutamate ligase domain DNA52_RS08620 PF08245 Mur ligase middle domain DNA52_RS08625 PF00133 tRNA synthetases class I (I, L, M and V) DNA52_RS08625 PF10458 Valyl tRNA synthetase tRNA binding arm DNA52_RS08625 PF08264 Anticodon-binding domain of tRNA DNA52_RS08630 PF08534 Redoxin DNA52_RS08635 PF18419 ATP-grasp-like domain DNA52_RS08635 PF04262 Glutamate-cysteine ligase DNA52_RS08635 PF02655 ATP-grasp domain DNA52_RS08645 PF02568 Thiamine biosynthesis protein (ThiI) DNA52_RS08645 PF02926 THUMP domain DNA52_RS08650 PF00266 Aminotransferase class-V DNA52_RS08660 PF06160 Septation ring formation regulator, EzrA DNA52_RS08665 PF13185 GAF domain DNA52_RS08670 PF00163 Ribosomal protein S4/S9 N-terminal domain DNA52_RS08670 PF01479 S4 domain DNA52_RS08675 PF06335 Protein of unknown function (DUF1054) DNA52_RS08690 PF01022 Bacterial regulatory protein, arsR family DNA52_RS08695 PF00128 Alpha amylase, catalytic domain DNA52_RS08705 PF03613 PTS system mannose/fructose/sorbose family IID component DNA52_RS08710 PF03609 PTS system sorbose-specific iic component DNA52_RS08715 PF03830 PTS system sorbose subfamily IIB component DNA52_RS08720 PF00356 Bacterial regulatory proteins, lacI family DNA52_RS08725 PF04262 Glutamate-cysteine ligase DNA52_RS08725 PF18419 ATP-grasp-like domain DNA52_RS08730 PF05496 Holliday junction DNA helicase RuvB P-loop domain DNA52_RS08730 PF16193 AAA C-terminal domain DNA52_RS08730 PF12002 MgsA AAA+ ATPase C terminal DNA52_RS08745 PF00582 Universal stress protein family DNA52_RS08765 PF01820 D-ala D-ala ligase N-terminus DNA52_RS08765 PF07478 D-ala D-ala ligase C-terminus DNA52_RS08770 PF00107 Zinc-binding dehydrogenase DNA52_RS08770 PF08240 Alcohol dehydrogenase GroES-like domain DNA52_RS08780 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DNA52_RS08780 PF00056 lactate/malate dehydrogenase, NAD binding domain DNA52_RS08785 PF03180 NLPA lipoprotein DNA52_RS08790 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS08795 PF00005 ABC transporter DNA52_RS08795 PF09383 NIL domain DNA52_RS08800 PF01597 Glycine cleavage H-protein DNA52_RS08805 PF01098 Cell cycle protein DNA52_RS08815 PF01809 Putative membrane protein insertion efficiency factor DNA52_RS08830 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DNA52_RS08835 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DNA52_RS08835 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DNA52_RS08840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DNA52_RS08840 PF02874 ATP synthase alpha/beta family, beta-barrel domain DNA52_RS08845 PF00231 ATP synthase DNA52_RS08850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DNA52_RS08850 PF02874 ATP synthase alpha/beta family, beta-barrel domain DNA52_RS08850 PF00306 ATP synthase alpha/beta chain, C terminal domain DNA52_RS08855 PF00213 ATP synthase delta (OSCP) subunit DNA52_RS08860 PF00430 ATP synthase B/B' CF(0) DNA52_RS08865 PF00137 ATP synthase subunit C DNA52_RS08870 PF00119 ATP synthase A chain DNA52_RS08875 PF00860 Permease family DNA52_RS08890 PF00464 Serine hydroxymethyltransferase DNA52_RS08895 PF03481 Putative GTP-binding controlling metal-binding DNA52_RS08895 PF01300 Telomere recombination DNA52_RS08900 PF05175 Methyltransferase small domain DNA52_RS08900 PF17827 PrmC N-terminal domain DNA52_RS08905 PF00472 RF-1 domain DNA52_RS08905 PF03462 PCRF domain DNA52_RS08910 PF00265 Thymidine kinase DNA52_RS08915 PF08245 Mur ligase middle domain DNA52_RS08915 PF08353 Domain of unknown function (DUF1727) DNA52_RS08920 PF07685 CobB/CobQ-like glutamine amidotransferase domain DNA52_RS08925 PF01238 Phosphomannose isomerase type I DNA52_RS08930 PF00144 Beta-lactamase DNA52_RS08940 PF01063 Amino-transferase class IV DNA52_RS08955 PF00664 ABC transporter transmembrane region DNA52_RS08955 PF00005 ABC transporter DNA52_RS08960 PF00005 ABC transporter DNA52_RS08960 PF00664 ABC transporter transmembrane region DNA52_RS08970 PF01522 Polysaccharide deacetylase DNA52_RS09015 PF06458 MucBP domain DNA52_RS09060 PF00005 ABC transporter DNA52_RS09060 PF00664 ABC transporter transmembrane region DNA52_RS09070 PF12704 MacB-like periplasmic core domain DNA52_RS09070 PF02687 FtsX-like permease family DNA52_RS09070 PF00005 ABC transporter DNA52_RS09080 PF00342 Phosphoglucose isomerase DNA52_RS09085 PF06800 Sugar transport protein DNA52_RS09090 PF17785 PUA-like domain DNA52_RS09090 PF10672 S-adenosylmethionine-dependent methyltransferase DNA52_RS09095 PF00512 His Kinase A (phospho-acceptor) domain DNA52_RS09095 PF00672 HAMP domain DNA52_RS09095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNA52_RS09100 PF00072 Response regulator receiver domain DNA52_RS09100 PF00486 Transcriptional regulatory protein, C terminal DNA52_RS09105 PF05167 Uncharacterised ACR (DUF711) DNA52_RS09115 PF00892 EamA-like transporter family DNA52_RS09135 PF07690 Major Facilitator Superfamily DNA52_RS09155 PF00877 NlpC/P60 family DNA52_RS09160 PF01037 Lrp/AsnC ligand binding domain DNA52_RS09175 PF00990 Diguanylate cyclase, GGDEF domain DNA52_RS09180 PF00005 ABC transporter DNA52_RS09180 PF12848 ABC transporter DNA52_RS09195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DNA52_RS09210 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DNA52_RS09210 PF00367 phosphotransferase system, EIIB DNA52_RS09210 PF02378 Phosphotransferase system, EIIC DNA52_RS09215 PF08546 Ketopantoate reductase PanE/ApbA C terminal DNA52_RS09215 PF02558 Ketopantoate reductase PanE/ApbA DNA52_RS09220 PF02645 Uncharacterised protein, DegV family COG1307 DNA52_RS09225 PF03447 Homoserine dehydrogenase, NAD binding domain DNA52_RS09225 PF00742 Homoserine dehydrogenase DNA52_RS09230 PF01053 Cys/Met metabolism PLP-dependent enzyme DNA52_RS09235 PF04204 Homoserine O-succinyltransferase DNA52_RS09250 PF02653 Branched-chain amino acid transport system / permease component DNA52_RS09255 PF00005 ABC transporter DNA52_RS09260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNA52_RS09260 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNA52_RS09270 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DNA52_RS09270 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DNA52_RS09275 PF03741 Integral membrane protein TerC family DNA52_RS09280 PF12464 Maltose acetyltransferase DNA52_RS09280 PF14602 Hexapeptide repeat of succinyl-transferase DNA52_RS09285 PF00155 Aminotransferase class I and II DNA52_RS09290 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DNA52_RS09295 PF01502 Phosphoribosyl-AMP cyclohydrolase DNA52_RS09300 PF00977 Histidine biosynthesis protein DNA52_RS09305 PF00977 Histidine biosynthesis protein DNA52_RS09310 PF00117 Glutamine amidotransferase class-I DNA52_RS09315 PF00475 Imidazoleglycerol-phosphate dehydratase DNA52_RS09320 PF00815 Histidinol dehydrogenase DNA52_RS09325 PF01634 ATP phosphoribosyltransferase DNA52_RS09330 PF13393 Histidyl-tRNA synthetase DNA52_RS09335 PF02811 PHP domain DNA52_RS09360 PF02774 Semialdehyde dehydrogenase, dimerisation domain DNA52_RS09360 PF01118 Semialdehyde dehydrogenase, NAD binding domain DNA52_RS09375 PF06736 Protein of unknown function (DUF1211) DNA52_RS09395 PF00884 Sulfatase DNA52_RS09400 PF03009 Glycerophosphoryl diester phosphodiesterase family DNA52_RS09410 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNA52_RS09420 PF17961 Bacterial Ig domain DNA52_RS09420 PF00746 LPXTG cell wall anchor motif DNA52_RS09420 PF05737 Collagen binding domain DNA52_RS09425 PF03976 Polyphosphate kinase 2 (PPK2) DNA52_RS09430 PF00881 Nitroreductase family DNA52_RS09435 PF01156 Inosine-uridine preferring nucleoside hydrolase DNA52_RS09440 PF00075 RNase H DNA52_RS09445 PF06800 Sugar transport protein DNA52_RS09455 PF04055 Radical SAM superfamily DNA52_RS09460 PF08220 DeoR-like helix-turn-helix domain DNA52_RS09460 PF00455 DeoR C terminal sensor domain DNA52_RS09465 PF02901 Pyruvate formate lyase-like DNA52_RS09465 PF01228 Glycine radical DNA52_RS09470 PF13936 Helix-turn-helix domain DNA52_RS09470 PF04198 Putative sugar-binding domain DNA52_RS09475 PF00923 Transaldolase/Fructose-6-phosphate aldolase DNA52_RS09480 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DNA52_RS09485 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DNA52_RS09485 PF00356 Bacterial regulatory proteins, lacI family DNA52_RS09490 PF01418 Helix-turn-helix domain, rpiR family DNA52_RS09490 PF01380 SIS domain DNA52_RS09495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNA52_RS09495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNA52_RS09500 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DNA52_RS09500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DNA52_RS09505 PF00999 Sodium/hydrogen exchanger family DNA52_RS09510 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DNA52_RS09510 PF02779 Transketolase, pyrimidine binding domain DNA52_RS09510 PF02780 Transketolase, C-terminal domain DNA52_RS09515 PF00857 Isochorismatase family DNA52_RS09525 PF00005 ABC transporter DNA52_RS09530 PF00392 Bacterial regulatory proteins, gntR family DNA52_RS09570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNA52_RS09570 PF00205 Thiamine pyrophosphate enzyme, central domain DNA52_RS09570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNA52_RS09580 PF00326 Prolyl oligopeptidase family DNA52_RS09585 PF00085 Thioredoxin DNA52_RS09590 PF01053 Cys/Met metabolism PLP-dependent enzyme DNA52_RS09620 PF03099 Biotin/lipoate A/B protein ligase family DNA52_RS09620 PF10437 Bacterial lipoate protein ligase C-terminus DNA52_RS09625 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DNA52_RS09625 PF13457 GW (Gly-Tryp) dipeptide domain DNA52_RS09635 PF03613 PTS system mannose/fructose/sorbose family IID component DNA52_RS09640 PF03609 PTS system sorbose-specific iic component DNA52_RS09645 PF03830 PTS system sorbose subfamily IIB component DNA52_RS09650 PF07702 UTRA domain DNA52_RS09650 PF00392 Bacterial regulatory proteins, gntR family DNA52_RS09655 PF00582 Universal stress protein family DNA52_RS09660 PF00849 RNA pseudouridylate synthase DNA52_RS09660 PF01479 S4 domain DNA52_RS09665 PF01381 Helix-turn-helix DNA52_RS09665 PF08671 Anti-repressor SinI DNA52_RS09675 PF00534 Glycosyl transferases group 1 DNA52_RS09680 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase DNA52_RS09680 PF09363 XFP C-terminal domain DNA52_RS09680 PF09364 XFP N-terminal domain DNA52_RS09685 PF00756 Putative esterase DNA52_RS09690 PF07702 UTRA domain DNA52_RS09690 PF00392 Bacterial regulatory proteins, gntR family DNA52_RS09695 PF04073 Aminoacyl-tRNA editing domain DNA52_RS09705 PF01966 HD domain DNA52_RS09735 PF01595 Cyclin M transmembrane N-terminal domain DNA52_RS09735 PF03471 Transporter associated domain DNA52_RS09735 PF00571 CBS domain DNA52_RS09740 PF07972 NrdI Flavodoxin like DNA52_RS09745 PF00999 Sodium/hydrogen exchanger family DNA52_RS09750 PF07690 Major Facilitator Superfamily DNA52_RS09755 PF07739 TipAS antibiotic-recognition domain DNA52_RS09755 PF13411 MerR HTH family regulatory protein DNA52_RS09760 PF08240 Alcohol dehydrogenase GroES-like domain DNA52_RS09760 PF00107 Zinc-binding dehydrogenase DNA52_RS09770 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DNA52_RS09770 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DNA52_RS09780 PF00155 Aminotransferase class I and II DNA52_RS09780 PF00392 Bacterial regulatory proteins, gntR family DNA52_RS09785 PF00155 Aminotransferase class I and II DNA52_RS09805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNA52_RS09805 PF03466 LysR substrate binding domain DNA52_RS09810 PF13460 NAD(P)H-binding DNA52_RS09820 PF13361 UvrD-like helicase C-terminal domain DNA52_RS09820 PF00580 UvrD/REP helicase N-terminal domain DNA52_RS09820 PF12705 PD-(D/E)XK nuclease superfamily DNA52_RS09825 PF12705 PD-(D/E)XK nuclease superfamily DNA52_RS09835 PF00156 Phosphoribosyl transferase domain DNA52_RS09840 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DNA52_RS09845 PF01180 Dihydroorotate dehydrogenase DNA52_RS09850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DNA52_RS09850 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DNA52_RS09850 PF02142 MGS-like domain DNA52_RS09855 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DNA52_RS09855 PF00117 Glutamine amidotransferase class-I DNA52_RS09860 PF01979 Amidohydrolase family DNA52_RS09865 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DNA52_RS09865 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DNA52_RS09870 PF00156 Phosphoribosyl transferase domain DNA52_RS09875 PF07905 Purine catabolism regulatory protein-like family DNA52_RS09875 PF13556 PucR C-terminal helix-turn-helix domain DNA52_RS09875 PF17853 GGDEF-like domain DNA52_RS09880 PF00860 Permease family DNA52_RS09885 PF00860 Permease family DNA52_RS09905 PF00535 Glycosyl transferase family 2 DNA52_RS09915 PF02843 Phosphoribosylglycinamide synthetase, C domain DNA52_RS09915 PF02844 Phosphoribosylglycinamide synthetase, N domain DNA52_RS09915 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DNA52_RS09920 PF01808 AICARFT/IMPCHase bienzyme DNA52_RS09920 PF02142 MGS-like domain DNA52_RS09925 PF00551 Formyl transferase DNA52_RS09930 PF02769 AIR synthase related protein, C-terminal domain DNA52_RS09930 PF00586 AIR synthase related protein, N-terminal domain DNA52_RS09935 PF13537 Glutamine amidotransferase domain DNA52_RS09935 PF00156 Phosphoribosyl transferase domain DNA52_RS09940 PF02769 AIR synthase related protein, C-terminal domain DNA52_RS09940 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DNA52_RS09940 PF00586 AIR synthase related protein, N-terminal domain DNA52_RS09950 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DNA52_RS09955 PF01259 SAICAR synthetase DNA52_RS09960 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DNA52_RS09960 PF02222 ATP-grasp domain DNA52_RS09965 PF00731 AIR carboxylase DNA52_RS09970 PF04205 FMN-binding domain DNA52_RS09970 PF03358 NADPH-dependent FMN reductase DNA52_RS09970 PF00890 FAD binding domain DNA52_RS09975 PF03358 NADPH-dependent FMN reductase DNA52_RS09975 PF00890 FAD binding domain DNA52_RS09975 PF04205 FMN-binding domain DNA52_RS09980 PF03099 Biotin/lipoate A/B protein ligase family DNA52_RS09980 PF10437 Bacterial lipoate protein ligase C-terminus DNA52_RS09985 PF13350 Tyrosine phosphatase family DNA52_RS10000 PF17763 Glutaminase/Asparaginase C-terminal domain DNA52_RS10000 PF00710 Asparaginase, N-terminal DNA52_RS10005 PF00005 ABC transporter DNA52_RS10020 PF00392 Bacterial regulatory proteins, gntR family DNA52_RS10025 PF00005 ABC transporter DNA52_RS10035 PF00582 Universal stress protein family DNA52_RS10045 PF04138 GtrA-like protein DNA52_RS10065 PF00155 Aminotransferase class I and II DNA52_RS10085 PF02903 Alpha amylase, N-terminal ig-like domain DNA52_RS10085 PF00128 Alpha amylase, catalytic domain DNA52_RS10090 PF00291 Pyridoxal-phosphate dependent enzyme DNA52_RS10090 PF14821 Threonine synthase N terminus DNA52_RS10105 PF12464 Maltose acetyltransferase DNA52_RS10105 PF00132 Bacterial transferase hexapeptide (six repeats) DNA52_RS10110 PF00293 NUDIX domain DNA52_RS10145 PF08279 HTH domain DNA52_RS10145 PF02829 3H domain DNA52_RS10150 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DNA52_RS10150 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DNA52_RS10150 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DNA52_RS10155 PF00440 Bacterial regulatory proteins, tetR family DNA52_RS10165 PF00005 ABC transporter DNA52_RS10175 PF00232 Glycosyl hydrolase family 1 DNA52_RS10180 PF00232 Glycosyl hydrolase family 1 DNA52_RS10185 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DNA52_RS10190 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DNA52_RS10195 PF07702 UTRA domain DNA52_RS10195 PF00392 Bacterial regulatory proteins, gntR family DNA52_RS10200 PF00535 Glycosyl transferase family 2 DNA52_RS10205 PF00300 Histidine phosphatase superfamily (branch 1) DNA52_RS10220 PF08546 Ketopantoate reductase PanE/ApbA C terminal DNA52_RS10220 PF02558 Ketopantoate reductase PanE/ApbA DNA52_RS10225 PF00892 EamA-like transporter family DNA52_RS10230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNA52_RS10245 PF00258 Flavodoxin DNA52_RS10265 PF01487 Type I 3-dehydroquinase DNA52_RS10270 PF13520 Amino acid permease DNA52_RS10280 PF00248 Aldo/keto reductase family DNA52_RS10285 PF00248 Aldo/keto reductase family DNA52_RS10315 PF07155 ECF-type riboflavin transporter, S component DNA52_RS10320 PF00579 tRNA synthetases class I (W and Y) DNA52_RS10320 PF01479 S4 domain DNA52_RS10335 PF13529 Peptidase_C39 like family DNA52_RS10360 PF04474 Protein of unknown function (DUF554) DNA52_RS10365 PF06445 GyrI-like small molecule binding domain DNA52_RS10365 PF13411 MerR HTH family regulatory protein DNA52_RS10370 PF00375 Sodium:dicarboxylate symporter family DNA52_RS10380 PF02687 FtsX-like permease family DNA52_RS10385 PF00005 ABC transporter DNA52_RS10395 PF01156 Inosine-uridine preferring nucleoside hydrolase DNA52_RS10405 PF00999 Sodium/hydrogen exchanger family DNA52_RS10420 PF10415 Fumarase C C-terminus DNA52_RS10420 PF00206 Lyase DNA52_RS10425 PF07690 Major Facilitator Superfamily DNA52_RS10435 PF07690 Major Facilitator Superfamily DNA52_RS10445 PF13302 Acetyltransferase (GNAT) domain DNA52_RS10450 PF03601 Conserved hypothetical protein 698 DNA52_RS10455 PF03466 LysR substrate binding domain DNA52_RS10455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNA52_RS10460 PF13439 Glycosyltransferase Family 4 DNA52_RS10460 PF00534 Glycosyl transferases group 1 DNA52_RS10465 PF13439 Glycosyltransferase Family 4 DNA52_RS10480 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DNA52_RS10480 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DNA52_RS10490 PF00005 ABC transporter DNA52_RS10490 PF13732 Domain of unknown function (DUF4162) DNA52_RS10500 PF00106 short chain dehydrogenase DNA52_RS10515 PF13411 MerR HTH family regulatory protein DNA52_RS10520 PF07687 Peptidase dimerisation domain DNA52_RS10520 PF01546 Peptidase family M20/M25/M40 DNA52_RS10530 PF00005 ABC transporter DNA52_RS10535 PF00633 Helix-hairpin-helix motif DNA52_RS10535 PF00730 HhH-GPD superfamily base excision DNA repair protein DNA52_RS10540 PF12464 Maltose acetyltransferase DNA52_RS10540 PF14602 Hexapeptide repeat of succinyl-transferase DNA52_RS10545 PF10502 Signal peptidase, peptidase S26 DNA52_RS10560 PF00583 Acetyltransferase (GNAT) family DNA52_RS10585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNA52_RS10585 PF03466 LysR substrate binding domain DNA52_RS10595 PF00107 Zinc-binding dehydrogenase DNA52_RS10595 PF08240 Alcohol dehydrogenase GroES-like domain DNA52_RS10605 PF00248 Aldo/keto reductase family DNA52_RS10610 PF06736 Protein of unknown function (DUF1211) DNA52_RS10625 PF06800 Sugar transport protein DNA52_RS10635 PF00248 Aldo/keto reductase family DNA52_RS10640 PF03466 LysR substrate binding domain DNA52_RS10640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNA52_RS10660 PF00106 short chain dehydrogenase DNA52_RS10665 PF00248 Aldo/keto reductase family DNA52_RS10670 PF00248 Aldo/keto reductase family DNA52_RS10675 PF07690 Major Facilitator Superfamily DNA52_RS10685 PF00582 Universal stress protein family DNA52_RS10690 PF12464 Maltose acetyltransferase DNA52_RS10690 PF14602 Hexapeptide repeat of succinyl-transferase DNA52_RS10695 PF13419 Haloacid dehalogenase-like hydrolase DNA52_RS10710 PF00155 Aminotransferase class I and II DNA52_RS10720 PF00248 Aldo/keto reductase family DNA52_RS10725 PF00005 ABC transporter DNA52_RS10725 PF00664 ABC transporter transmembrane region DNA52_RS10730 PF00664 ABC transporter transmembrane region DNA52_RS10730 PF00005 ABC transporter DNA52_RS10735 PF07690 Major Facilitator Superfamily DNA52_RS10760 PF01022 Bacterial regulatory protein, arsR family DNA52_RS10765 PF01223 DNA/RNA non-specific endonuclease DNA52_RS10785 PF12848 ABC transporter DNA52_RS10785 PF00005 ABC transporter DNA52_RS10800 PF17755 UvrA DNA-binding domain DNA52_RS10800 PF17760 UvrA interaction domain DNA52_RS10800 PF00005 ABC transporter DNA52_RS10815 PF11700 Vacuole effluxer Atg22 like DNA52_RS10850 PF00990 Diguanylate cyclase, GGDEF domain DNA52_RS10855 PF00563 EAL domain DNA52_RS10855 PF12792 CSS motif domain associated with EAL DNA52_RS10865 PF13597 Anaerobic ribonucleoside-triphosphate reductase DNA52_RS10865 PF03477 ATP cone domain DNA52_RS10875 PF01327 Polypeptide deformylase DNA52_RS10880 PF02424 ApbE family DNA52_RS10885 PF01207 Dihydrouridine synthase (Dus) DNA52_RS10905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNA52_RS10905 PF03466 LysR substrate binding domain DNA52_RS10910 PF00939 Sodium:sulfate symporter transmembrane region DNA52_RS10915 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DNA52_RS10975 PF00892 EamA-like transporter family DNA52_RS11000 PF00480 ROK family DNA52_RS11005 PF00005 ABC transporter DNA52_RS11005 PF00664 ABC transporter transmembrane region DNA52_RS11015 PF00881 Nitroreductase family DNA52_RS11020 PF02378 Phosphotransferase system, EIIC DNA52_RS11020 PF00367 phosphotransferase system, EIIB DNA52_RS11020 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DNA52_RS11025 PF00005 ABC transporter DNA52_RS11030 PF02653 Branched-chain amino acid transport system / permease component DNA52_RS11065 PF00005 ABC transporter DNA52_RS11070 PF00005 ABC transporter DNA52_RS11070 PF12399 Branched-chain amino acid ATP-binding cassette transporter DNA52_RS11075 PF02653 Branched-chain amino acid transport system / permease component DNA52_RS11075 PF11862 Domain of unknown function (DUF3382) DNA52_RS11080 PF02653 Branched-chain amino acid transport system / permease component DNA52_RS11085 PF13458 Periplasmic binding protein DNA52_RS11095 PF00413 Matrixin DNA52_RS11100 PF04138 GtrA-like protein DNA52_RS11110 PF01566 Natural resistance-associated macrophage protein DNA52_RS11130 PF01022 Bacterial regulatory protein, arsR family DNA52_RS11140 PF02687 FtsX-like permease family DNA52_RS11140 PF00005 ABC transporter DNA52_RS11140 PF12704 MacB-like periplasmic core domain DNA52_RS11175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DNA52_RS11180 PF02378 Phosphotransferase system, EIIC DNA52_RS11185 PF00232 Glycosyl hydrolase family 1 DNA52_RS11195 PF13411 MerR HTH family regulatory protein DNA52_RS11200 PF06737 Transglycosylase-like domain DNA52_RS11205 PF01464 Transglycosylase SLT domain DNA52_RS11220 PF01297 Zinc-uptake complex component A periplasmic DNA52_RS11235 PF00990 Diguanylate cyclase, GGDEF domain DNA52_RS11245 PF11798 IMS family HHH motif DNA52_RS11245 PF00817 impB/mucB/samB family DNA52_RS11245 PF11799 impB/mucB/samB family C-terminal domain DNA52_RS11250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNA52_RS11250 PF03466 LysR substrate binding domain DNA52_RS11260 PF00106 short chain dehydrogenase DNA52_RS11305 PF00005 ABC transporter DNA52_RS11305 PF00664 ABC transporter transmembrane region DNA52_RS11310 PF00005 ABC transporter DNA52_RS11310 PF00664 ABC transporter transmembrane region DNA52_RS11320 PF01546 Peptidase family M20/M25/M40 DNA52_RS11320 PF07687 Peptidase dimerisation domain DNA52_RS11340 PF13520 Amino acid permease DNA52_RS11350 PF00465 Iron-containing alcohol dehydrogenase DNA52_RS11365 PF08240 Alcohol dehydrogenase GroES-like domain DNA52_RS11365 PF00107 Zinc-binding dehydrogenase DNA52_RS11370 PF00403 Heavy-metal-associated domain DNA52_RS11430 PF00107 Zinc-binding dehydrogenase DNA52_RS11430 PF08240 Alcohol dehydrogenase GroES-like domain DNA52_RS11470 PF13419 Haloacid dehalogenase-like hydrolase DNA52_RS11475 PF01638 HxlR-like helix-turn-helix DNA52_RS11480 PF07690 Major Facilitator Superfamily DNA52_RS11490 PF00733 Asparagine synthase DNA52_RS11490 PF13537 Glutamine amidotransferase domain DNA52_RS11495 PF04397 LytTr DNA-binding domain DNA52_RS11495 PF00072 Response regulator receiver domain DNA52_RS11510 PF00440 Bacterial regulatory proteins, tetR family DNA52_RS11510 PF08359 YsiA-like protein, C-terminal region DNA52_RS11520 PF00171 Aldehyde dehydrogenase family DNA52_RS11535 PF01638 HxlR-like helix-turn-helix DNA52_RS11540 PF00106 short chain dehydrogenase DNA52_RS11555 PF06736 Protein of unknown function (DUF1211) DNA52_RS11560 PF00248 Aldo/keto reductase family DNA52_RS11565 PF07690 Major Facilitator Superfamily DNA52_RS11575 PF01497 Periplasmic binding protein DNA52_RS11580 PF00005 ABC transporter DNA52_RS11585 PF01032 FecCD transport family DNA52_RS11590 PF01032 FecCD transport family DNA52_RS11595 PF00440 Bacterial regulatory proteins, tetR family DNA52_RS11605 PF00106 short chain dehydrogenase DNA52_RS11610 PF12464 Maltose acetyltransferase DNA52_RS11610 PF14602 Hexapeptide repeat of succinyl-transferase DNA52_RS11640 PF06458 MucBP domain DNA52_RS11655 PF06421 GTP-binding protein LepA C-terminus DNA52_RS11655 PF00009 Elongation factor Tu GTP binding domain DNA52_RS11655 PF00679 Elongation factor G C-terminus DNA52_RS11665 PF09297 NADH pyrophosphatase zinc ribbon domain DNA52_RS11665 PF00293 NUDIX domain DNA52_RS11670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNA52_RS11670 PF03466 LysR substrate binding domain DNA52_RS11675 PF00890 FAD binding domain DNA52_RS11675 PF14537 Cytochrome c3 DNA52_RS11685 PF00210 Ferritin-like domain DNA52_RS11695 PF00232 Glycosyl hydrolase family 1 DNA52_RS11700 PF02378 Phosphotransferase system, EIIC DNA52_RS11720 PF13411 MerR HTH family regulatory protein DNA52_RS11740 PF01965 DJ-1/PfpI family DNA52_RS11765 PF02687 FtsX-like permease family DNA52_RS11765 PF00005 ABC transporter DNA52_RS11765 PF12704 MacB-like periplasmic core domain DNA52_RS11775 PF02615 Malate/L-lactate dehydrogenase DNA52_RS11795 PF03734 L,D-transpeptidase catalytic domain DNA52_RS11800 PF00248 Aldo/keto reductase family DNA52_RS11810 PF13577 SnoaL-like domain DNA52_RS11815 PF07690 Major Facilitator Superfamily DNA52_RS11850 PF00300 Histidine phosphatase superfamily (branch 1) DNA52_RS11855 PF01594 AI-2E family transporter DNA52_RS11860 PF00480 ROK family DNA52_RS11880 PF00069 Protein kinase domain DNA52_RS11880 PF03793 PASTA domain DNA52_RS11920 PF00583 Acetyltransferase (GNAT) family DNA52_RS11925 PF00768 D-alanyl-D-alanine carboxypeptidase DNA52_RS11925 PF07943 Penicillin-binding protein 5, C-terminal domain DNA52_RS11930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNA52_RS11930 PF00512 His Kinase A (phospho-acceptor) domain DNA52_RS11935 PF00486 Transcriptional regulatory protein, C terminal DNA52_RS11935 PF00072 Response regulator receiver domain DNA52_RS11950 PF00571 CBS domain DNA52_RS11950 PF00478 IMP dehydrogenase / GMP reductase domain DNA52_RS11960 PF06071 Protein of unknown function (DUF933) DNA52_RS11960 PF01926 50S ribosome-binding GTPase DNA52_RS11965 PF06107 Bacterial protein of unknown function (DUF951) DNA52_RS11970 PF02195 ParB-like nuclease domain DNA52_RS11970 PF17762 HTH domain found in ParB protein DNA52_RS11975 PF13614 AAA domain DNA52_RS11980 PF02195 ParB-like nuclease domain DNA52_RS11980 PF17762 HTH domain found in ParB protein DNA52_RS11985 PF02527 rRNA small subunit methyltransferase G DNA52_RS11990 PF01773 Na+ dependent nucleoside transporter N-terminus DNA52_RS11990 PF07662 Na+ dependent nucleoside transporter C-terminus DNA52_RS12005 PF03466 LysR substrate binding domain DNA52_RS12005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNA52_RS12010 PF00155 Aminotransferase class I and II DNA52_RS12015 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNA52_RS12020 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS12025 PF00005 ABC transporter DNA52_RS12030 PF00497 Bacterial extracellular solute-binding proteins, family 3 DNA52_RS12055 PF00367 phosphotransferase system, EIIB DNA52_RS12055 PF02378 Phosphotransferase system, EIIC DNA52_RS12055 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DNA52_RS12060 PF00128 Alpha amylase, catalytic domain DNA52_RS12065 PF00356 Bacterial regulatory proteins, lacI family DNA52_RS12080 PF03649 Uncharacterised protein family (UPF0014) DNA52_RS12085 PF00005 ABC transporter DNA52_RS12090 PF05958 tRNA (Uracil-5-)-methyltransferase DNA52_RS12090 PF01938 TRAM domain DNA52_RS12110 PF00480 ROK family DNA52_RS12115 PF01074 Glycosyl hydrolases family 38 N-terminal domain DNA52_RS12115 PF07748 Glycosyl hydrolases family 38 C-terminal domain DNA52_RS12115 PF09261 Alpha mannosidase middle domain DNA52_RS12120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DNA52_RS12120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DNA52_RS12120 PF02378 Phosphotransferase system, EIIC DNA52_RS12125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DNA52_RS12130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DNA52_RS12130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DNA52_RS12135 PF05043 Mga helix-turn-helix domain DNA52_RS12135 PF00874 PRD domain DNA52_RS12135 PF08279 HTH domain DNA52_RS12135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DNA52_RS12150 PF02378 Phosphotransferase system, EIIC DNA52_RS12150 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DNA52_RS12150 PF00367 phosphotransferase system, EIIB DNA52_RS12165 PF03358 NADPH-dependent FMN reductase DNA52_RS12165 PF00890 FAD binding domain DNA52_RS12165 PF04205 FMN-binding domain DNA52_RS12180 PF01475 Ferric uptake regulator family DNA52_RS12185 PF08951 Enterocin A Immunity DNA52_RS12205 PF03788 LrgA family DNA52_RS12210 PF04172 LrgB-like family DNA52_RS12215 PF02645 Uncharacterised protein, DegV family COG1307 DNA52_RS12225 PF04298 Putative neutral zinc metallopeptidase DNA52_RS12230 PF01593 Flavin containing amine oxidoreductase DNA52_RS12245 PF02595 Glycerate kinase family DNA52_RS12250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNA52_RS12250 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNA52_RS12260 PF10397 Adenylosuccinate lyase C-terminus DNA52_RS12260 PF00206 Lyase DNA52_RS12265 PF00709 Adenylosuccinate synthetase DNA52_RS12270 PF00478 IMP dehydrogenase / GMP reductase domain DNA52_RS12275 PF13350 Tyrosine phosphatase family DNA52_RS12280 PF13091 PLD-like domain DNA52_RS12280 PF13396 Phospholipase_D-nuclease N-terminal DNA52_RS12290 PF13520 Amino acid permease DNA52_RS12295 PF02705 K+ potassium transporter DNA52_RS12300 PF16916 Dimerisation domain of Zinc Transporter DNA52_RS12300 PF01545 Cation efflux family DNA52_RS12305 PF01594 AI-2E family transporter DNA52_RS12310 PF01717 Cobalamin-independent synthase, Catalytic domain DNA52_RS12315 PF00893 Small Multidrug Resistance protein DNA52_RS12320 PF00893 Small Multidrug Resistance protein DNA52_RS12325 PF03006 Haemolysin-III related DNA52_RS12330 PF01022 Bacterial regulatory protein, arsR family DNA52_RS12335 PF01545 Cation efflux family DNA52_RS12360 PF00809 Pterin binding enzyme DNA52_RS12365 PF01725 Ham1 family DNA52_RS12370 PF02875 Mur ligase family, glutamate ligase domain DNA52_RS12370 PF08245 Mur ligase middle domain DNA52_RS12375 PF01227 GTP cyclohydrolase I DNA52_RS12380 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DNA52_RS12400 PF01297 Zinc-uptake complex component A periplasmic DNA52_RS12405 PF07690 Major Facilitator Superfamily DNA52_RS12435 PF00144 Beta-lactamase DNA52_RS12440 PF02901 Pyruvate formate lyase-like DNA52_RS12440 PF01228 Glycine radical DNA52_RS12445 PF04055 Radical SAM superfamily DNA52_RS12455 PF01883 Iron-sulfur cluster assembly protein DNA52_RS12460 PF00248 Aldo/keto reductase family DNA52_RS12490 PF02028 BCCT, betaine/carnitine/choline family transporter DNA52_RS12495 PF00403 Heavy-metal-associated domain DNA52_RS12505 PF04237 YjbR DNA52_RS12515 PF01979 Amidohydrolase family DNA52_RS12515 PF13382 Adenine deaminase C-terminal domain DNA52_RS12520 PF01380 SIS domain DNA52_RS12535 PF03553 Na+/H+ antiporter family DNA52_RS12540 PF00324 Amino acid permease DNA52_RS12550 PF04608 Phosphatidylglycerophosphatase A DNA52_RS12565 PF03960 ArsC family DNA52_RS12570 PF04343 Protein of unknown function, DUF488 DNA52_RS12580 PF00730 HhH-GPD superfamily base excision DNA repair protein DNA52_RS12580 PF14815 NUDIX domain DNA52_RS12595 PF00011 Hsp20/alpha crystallin family DNA52_RS12615 PF00892 EamA-like transporter family DNA52_RS12630 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DNA52_RS12640 PF03965 Penicillinase repressor DNA52_RS12655 PF07690 Major Facilitator Superfamily DNA52_RS12680 PF07690 Major Facilitator Superfamily DNA52_RS12680 PF00083 Sugar (and other) transporter DNA52_RS12710 PF00689 Cation transporting ATPase, C-terminus DNA52_RS12710 PF00690 Cation transporter/ATPase, N-terminus DNA52_RS12715 PF02872 5'-nucleotidase, C-terminal domain DNA52_RS12715 PF00149 Calcineurin-like phosphoesterase DNA52_RS12725 PF00248 Aldo/keto reductase family DNA52_RS12745 PF02673 Bacitracin resistance protein BacA DNA52_RS12750 PF01661 Macro domain DNA52_RS12785 PF12833 Helix-turn-helix domain DNA52_RS12810 PF00282 Pyridoxal-dependent decarboxylase conserved domain DNA52_RS12815 PF00877 NlpC/P60 family DNA52_RS12860 PF01209 ubiE/COQ5 methyltransferase family DNA52_RS12880 PF00403 Heavy-metal-associated domain DNA52_RS12885 PF00230 Major intrinsic protein DNA52_RS12890 PF00085 Thioredoxin DNA52_RS12895 PF02583 Metal-sensitive transcriptional repressor DNA52_RS12915 PF13545 Crp-like helix-turn-helix domain DNA52_RS12915 PF00027 Cyclic nucleotide-binding domain DNA52_RS12920 PF05649 Peptidase family M13 DNA52_RS12920 PF01431 Peptidase family M13 DNA52_RS12945 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNA52_RS12945 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNA52_RS12995 PF00230 Major intrinsic protein DNA52_RS13000 PF03109 ABC1 family DNA52_RS13005 PF05525 Branched-chain amino acid transport protein DNA52_RS13010 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DNA52_RS13015 PF02449 Beta-galactosidase DNA52_RS13015 PF08533 Beta-galactosidase C-terminal domain DNA52_RS13015 PF08532 Beta-galactosidase trimerisation domain DNA52_RS13020 PF00356 Bacterial regulatory proteins, lacI family DNA52_RS13030 PF07690 Major Facilitator Superfamily DNA52_RS13050 PF02661 Fic/DOC family DNA52_RS13050 PF18543 Intracellular delivery domain DNA52_RS13055 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA DNA52_RS13060 PF00356 Bacterial regulatory proteins, lacI family DNA52_RS13065 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DNA52_RS13065 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DNA52_RS13070 PF16363 GDP-mannose 4,6 dehydratase DNA52_RS13075 PF00288 GHMP kinases N terminal domain DNA52_RS13075 PF10509 Galactokinase galactose-binding signature DNA52_RS13075 PF08544 GHMP kinases C terminal DNA52_RS13080 PF02837 Glycosyl hydrolases family 2, sugar binding domain DNA52_RS13080 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DNA52_RS13080 PF00703 Glycosyl hydrolases family 2 DNA52_RS13085 PF02929 Beta galactosidase small chain DNA52_RS13090 PF16874 Glycosyl hydrolase family 36 C-terminal domain DNA52_RS13090 PF16875 Glycosyl hydrolase family 36 N-terminal domain DNA52_RS13095 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DNA52_RS13100 PF01263 Aldose 1-epimerase DNA52_RS13105 PF00356 Bacterial regulatory proteins, lacI family DNA52_RS13110 PF00248 Aldo/keto reductase family DNA52_RS13120 PF03358 NADPH-dependent FMN reductase DNA52_RS13120 PF00890 FAD binding domain DNA52_RS13120 PF04205 FMN-binding domain DNA52_RS13125 PF02424 ApbE family DNA52_RS13130 PF01487 Type I 3-dehydroquinase DNA52_RS13135 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DNA52_RS13135 PF08501 Shikimate dehydrogenase substrate binding domain DNA52_RS13140 PF03466 LysR substrate binding domain DNA52_RS13140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNA52_RS13145 PF07690 Major Facilitator Superfamily DNA52_RS13150 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DNA52_RS13150 PF08501 Shikimate dehydrogenase substrate binding domain DNA52_RS13155 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DNA52_RS13155 PF08501 Shikimate dehydrogenase substrate binding domain DNA52_RS13170 PF03466 LysR substrate binding domain DNA52_RS13170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNA52_RS13175 PF07690 Major Facilitator Superfamily DNA52_RS13185 PF12697 Alpha/beta hydrolase family DNA52_RS13190 PF07702 UTRA domain DNA52_RS13190 PF00392 Bacterial regulatory proteins, gntR family DNA52_RS13195 PF02378 Phosphotransferase system, EIIC DNA52_RS13200 PF13580 SIS domain DNA52_RS13205 PF01869 BadF/BadG/BcrA/BcrD ATPase family DNA52_RS13215 PF00232 Glycosyl hydrolase family 1 DNA52_RS13220 PF00367 phosphotransferase system, EIIB DNA52_RS13220 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DNA52_RS13220 PF02378 Phosphotransferase system, EIIC DNA52_RS13225 PF03123 CAT RNA binding domain DNA52_RS13225 PF00874 PRD domain DNA52_RS13230 PF00232 Glycosyl hydrolase family 1 DNA52_RS13235 PF00232 Glycosyl hydrolase family 1 DNA52_RS13240 PF02378 Phosphotransferase system, EIIC DNA52_RS13240 PF00367 phosphotransferase system, EIIB DNA52_RS13240 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DNA52_RS13250 PF03633 Glycosyl hydrolase family 65, C-terminal domain DNA52_RS13250 PF03636 Glycosyl hydrolase family 65, N-terminal domain DNA52_RS13250 PF03632 Glycosyl hydrolase family 65 central catalytic domain DNA52_RS13255 PF00356 Bacterial regulatory proteins, lacI family DNA52_RS13265 PF01055 Glycosyl hydrolases family 31 DNA52_RS13265 PF17137 Domain of unknown function (DUF5110) DNA52_RS13265 PF16338 Domain of unknown function (DUF4968) DNA52_RS13265 PF13802 Galactose mutarotase-like DNA52_RS13275 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DNA52_RS13285 PF00456 Transketolase, thiamine diphosphate binding domain DNA52_RS13285 PF02779 Transketolase, pyrimidine binding domain DNA52_RS13285 PF02780 Transketolase, C-terminal domain DNA52_RS13290 PF00923 Transaldolase/Fructose-6-phosphate aldolase DNA52_RS13295 PF03611 PTS system sugar-specific permease component DNA52_RS13310 PF08279 HTH domain DNA52_RS13310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DNA52_RS13310 PF05043 Mga helix-turn-helix domain DNA52_RS13310 PF00874 PRD domain DNA52_RS13310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DNA52_RS13320 PF00107 Zinc-binding dehydrogenase DNA52_RS13320 PF08240 Alcohol dehydrogenase GroES-like domain DNA52_RS13325 PF03611 PTS system sugar-specific permease component DNA52_RS13330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DNA52_RS13340 PF00455 DeoR C terminal sensor domain DNA52_RS13340 PF08220 DeoR-like helix-turn-helix domain DNA52_RS13345 PF09364 XFP N-terminal domain DNA52_RS13345 PF09363 XFP C-terminal domain DNA52_RS13345 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase DNA52_RS13355 PF12464 Maltose acetyltransferase DNA52_RS13355 PF14602 Hexapeptide repeat of succinyl-transferase DNA52_RS13360 PF02610 L-arabinose isomerase DNA52_RS13360 PF11762 L-arabinose isomerase C-terminal domain DNA52_RS13365 PF00596 Class II Aldolase and Adducin N-terminal domain DNA52_RS13375 PF00083 Sugar (and other) transporter DNA52_RS13380 PF00392 Bacterial regulatory proteins, gntR family DNA52_RS13385 PF01418 Helix-turn-helix domain, rpiR family DNA52_RS13385 PF01380 SIS domain DNA52_RS13405 PF00474 Sodium:solute symporter family DNA52_RS13410 PF00999 Sodium/hydrogen exchanger family DNA52_RS13420 PF00480 ROK family DNA52_RS13425 PF00701 Dihydrodipicolinate synthetase family DNA52_RS13430 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DNA52_RS13435 PF14759 Reductase C-terminal DNA52_RS13435 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNA52_RS13460 PF04226 Transglycosylase associated protein DNA52_RS13465 PF00199 Catalase DNA52_RS13465 PF06628 Catalase-related immune-responsive DNA52_RS13470 PF03960 ArsC family DNA52_RS13475 PF04397 LytTr DNA-binding domain DNA52_RS13475 PF00072 Response regulator receiver domain DNA52_RS13490 PF04647 Accessory gene regulator B DNA52_RS13495 PF00004 ATPase family associated with various cellular activities (AAA) DNA52_RS13495 PF10431 C-terminal, D2-small domain, of ClpB protein DNA52_RS13495 PF07724 AAA domain (Cdc48 subfamily) DNA52_RS13495 PF17871 AAA lid domain DNA52_RS13505 PF01070 FMN-dependent dehydrogenase DNA52_RS13510 PF00205 Thiamine pyrophosphate enzyme, central domain DNA52_RS13510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNA52_RS13510 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNA52_RS13515 PF02082 Transcriptional regulator DNA52_RS13520 PF00205 Thiamine pyrophosphate enzyme, central domain DNA52_RS13520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DNA52_RS13520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DNA52_RS13535 PF00596 Class II Aldolase and Adducin N-terminal domain DNA52_RS13540 PF06134 L-rhamnose isomerase (RhaA) DNA52_RS13545 PF05336 L-rhamnose mutarotase DNA52_RS13550 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNA52_RS13550 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNA52_RS13555 PF07690 Major Facilitator Superfamily DNA52_RS13560 PF12833 Helix-turn-helix domain DNA52_RS13560 PF17853 GGDEF-like domain DNA52_RS13565 PF08220 DeoR-like helix-turn-helix domain DNA52_RS13565 PF00455 DeoR C terminal sensor domain DNA52_RS13650 PF12833 Helix-turn-helix domain DNA52_RS13695 PF00232 Glycosyl hydrolase family 1 DNA52_RS13700 PF00480 ROK family DNA52_RS13705 PF09261 Alpha mannosidase middle domain DNA52_RS13705 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain DNA52_RS13705 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 DNA52_RS13705 PF07748 Glycosyl hydrolases family 38 C-terminal domain DNA52_RS13705 PF01074 Glycosyl hydrolases family 38 N-terminal domain DNA52_RS13715 PF07702 UTRA domain DNA52_RS13715 PF00392 Bacterial regulatory proteins, gntR family DNA52_RS13725 PF03459 TOBE domain DNA52_RS13725 PF17912 MalK OB fold domain DNA52_RS13725 PF00005 ABC transporter DNA52_RS13730 PF00480 ROK family DNA52_RS13735 PF00072 Response regulator receiver domain DNA52_RS13735 PF12833 Helix-turn-helix domain DNA52_RS13740 PF06580 Histidine kinase DNA52_RS13740 PF00672 HAMP domain DNA52_RS13740 PF02743 Cache domain DNA52_RS13740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNA52_RS13750 PF00128 Alpha amylase, catalytic domain DNA52_RS13750 PF16657 Maltogenic Amylase, C-terminal domain DNA52_RS13755 PF12010 Domain of unknown function (DUF3502) DNA52_RS13760 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS13765 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS13775 PF12833 Helix-turn-helix domain DNA52_RS13775 PF01497 Periplasmic binding protein DNA52_RS13780 PF00005 ABC transporter DNA52_RS13780 PF00664 ABC transporter transmembrane region DNA52_RS13785 PF00664 ABC transporter transmembrane region DNA52_RS13785 PF00005 ABC transporter DNA52_RS13790 PF07702 UTRA domain DNA52_RS13790 PF00392 Bacterial regulatory proteins, gntR family DNA52_RS13795 PF13556 PucR C-terminal helix-turn-helix domain DNA52_RS13805 PF07663 Sorbitol phosphotransferase enzyme II C-terminus DNA52_RS13805 PF03612 Sorbitol phosphotransferase enzyme II N-terminus DNA52_RS13810 PF03608 PTS system enzyme II sorbitol-specific factor DNA52_RS13825 PF00106 short chain dehydrogenase DNA52_RS13830 PF06800 Sugar transport protein DNA52_RS13835 PF05025 RbsD / FucU transport protein family DNA52_RS13840 PF00294 pfkB family carbohydrate kinase DNA52_RS13840 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DNA52_RS13845 PF00356 Bacterial regulatory proteins, lacI family DNA52_RS13850 PF00465 Iron-containing alcohol dehydrogenase DNA52_RS13850 PF00171 Aldehyde dehydrogenase family DNA52_RS13860 PF03551 Transcriptional regulator PadR-like family DNA52_RS13860 PF10400 Virulence activator alpha C-term DNA52_RS13865 PF05870 Phenolic acid decarboxylase (PAD) DNA52_RS13880 PF02645 Uncharacterised protein, DegV family COG1307 DNA52_RS13890 PF03051 Peptidase C1-like family DNA52_RS13895 PF10502 Signal peptidase, peptidase S26 DNA52_RS13920 PF01134 Glucose inhibited division protein A DNA52_RS13920 PF13932 GidA associated domain DNA52_RS13925 PF01926 50S ribosome-binding GTPase DNA52_RS13925 PF10396 GTP-binding protein TrmE N-terminus DNA52_RS13925 PF12631 MnmE helical domain DNA52_RS13930 PF14804 Jag N-terminus DNA52_RS13930 PF01424 R3H domain DNA52_RS13935 PF01979 Amidohydrolase family DNA52_RS13940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNA52_RS13945 PF02096 60Kd inner membrane protein DNA52_RS13950 PF00825 Ribonuclease P DNA52_RS13955 PF00468 Ribosomal protein L34 DNA52_RS13960 PF00308 Bacterial dnaA protein DNA52_RS13960 PF11638 DnaA N-terminal domain DNA52_RS13960 PF08299 Bacterial dnaA protein helix-turn-helix DNA52_RS13965 PF02768 DNA polymerase III beta subunit, C-terminal domain DNA52_RS13965 PF00712 DNA polymerase III beta subunit, N-terminal domain DNA52_RS13965 PF02767 DNA polymerase III beta subunit, central domain DNA52_RS13975 PF02463 RecF/RecN/SMC N terminal domain DNA52_RS13980 PF00204 DNA gyrase B DNA52_RS13980 PF01751 Toprim domain DNA52_RS13980 PF00986 DNA gyrase B subunit, carboxyl terminus DNA52_RS13980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNA52_RS13985 PF03989 DNA gyrase C-terminal domain, beta-propeller DNA52_RS13985 PF00521 DNA gyrase/topoisomerase IV, subunit A DNA52_RS13990 PF01250 Ribosomal protein S6 DNA52_RS13995 PF00436 Single-strand binding protein family DNA52_RS14000 PF01084 Ribosomal protein S18 DNA52_RS14005 PF02272 DHHA1 domain DNA52_RS14005 PF01368 DHH family DNA52_RS14010 PF01281 Ribosomal protein L9, N-terminal domain DNA52_RS14010 PF03948 Ribosomal protein L9, C-terminal domain DNA52_RS14015 PF03796 DnaB-like helicase C terminal domain DNA52_RS14015 PF00772 DnaB-like helicase N terminal domain DNA52_RS14025 PF07690 Major Facilitator Superfamily DNA52_RS14030 PF00696 Amino acid kinase family DNA52_RS14035 PF00171 Aldehyde dehydrogenase family DNA52_RS14040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNA52_RS14050 PF00128 Alpha amylase, catalytic domain DNA52_RS14050 PF02806 Alpha amylase, C-terminal all-beta domain DNA52_RS14050 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DNA52_RS14055 PF00483 Nucleotidyl transferase DNA52_RS14060 PF00483 Nucleotidyl transferase DNA52_RS14065 PF08323 Starch synthase catalytic domain DNA52_RS14065 PF00534 Glycosyl transferases group 1 DNA52_RS14070 PF00343 Carbohydrate phosphorylase DNA52_RS14075 PF00128 Alpha amylase, catalytic domain DNA52_RS14075 PF02903 Alpha amylase, N-terminal ig-like domain DNA52_RS14085 PF13419 Haloacid dehalogenase-like hydrolase DNA52_RS14090 PF03636 Glycosyl hydrolase family 65, N-terminal domain DNA52_RS14090 PF03633 Glycosyl hydrolase family 65, C-terminal domain DNA52_RS14090 PF03632 Glycosyl hydrolase family 65 central catalytic domain DNA52_RS14100 PF00313 'Cold-shock' DNA-binding domain DNA52_RS14115 PF00072 Response regulator receiver domain DNA52_RS14115 PF00486 Transcriptional regulatory protein, C terminal DNA52_RS14120 PF00672 HAMP domain DNA52_RS14120 PF14827 Double sensory domain of two-component sensor kinase DNA52_RS14120 PF00512 His Kinase A (phospho-acceptor) domain DNA52_RS14120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNA52_RS14120 PF13426 PAS domain DNA52_RS14130 PF09648 YycH protein DNA52_RS14135 PF00753 Metallo-beta-lactamase superfamily DNA52_RS14140 PF13180 PDZ domain DNA52_RS14145 PF02590 Predicted SPOUT methyltransferase DNA52_RS14155 PF00171 Aldehyde dehydrogenase family DNA52_RS14165 PF03167 Uracil DNA glycosylase superfamily DNA52_RS14185 PF04205 FMN-binding domain DNA52_RS14185 PF00890 FAD binding domain DNA52_RS14185 PF03358 NADPH-dependent FMN reductase DNA52_RS14190 PF00939 Sodium:sulfate symporter transmembrane region DNA52_RS14205 PF01451 Low molecular weight phosphotyrosine protein phosphatase DNA52_RS14220 PF00881 Nitroreductase family DNA52_RS14225 PF13556 PucR C-terminal helix-turn-helix domain DNA52_RS14225 PF17853 GGDEF-like domain DNA52_RS14225 PF07905 Purine catabolism regulatory protein-like family DNA52_RS14235 PF13419 Haloacid dehalogenase-like hydrolase DNA52_RS14240 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DNA52_RS14250 PF13350 Tyrosine phosphatase family DNA52_RS14255 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal DNA52_RS14255 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal DNA52_RS14275 PF02525 Flavodoxin-like fold DNA52_RS14280 PF00009 Elongation factor Tu GTP binding domain DNA52_RS14280 PF00679 Elongation factor G C-terminus DNA52_RS14280 PF14492 Elongation Factor G, domain II DNA52_RS14280 PF03764 Elongation factor G, domain IV DNA52_RS14310 PF00107 Zinc-binding dehydrogenase DNA52_RS14310 PF08240 Alcohol dehydrogenase GroES-like domain DNA52_RS14335 PF00561 alpha/beta hydrolase fold DNA52_RS14340 PF03883 Peroxide stress protein YaaA DNA52_RS14350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNA52_RS14375 PF00005 ABC transporter DNA52_RS14380 PF02361 Cobalt transport protein DNA52_RS14385 PF01891 Cobalt uptake substrate-specific transmembrane region DNA52_RS14385 PF13190 PDGLE domain DNA52_RS14390 PF13545 Crp-like helix-turn-helix domain DNA52_RS14395 PF09861 Lactate racemase N-terminal domain DNA52_RS14400 PF00731 AIR carboxylase DNA52_RS14405 PF01969 Protein of unknown function DUF111 DNA52_RS14410 PF01969 Protein of unknown function DUF111 DNA52_RS14415 PF00230 Major intrinsic protein DNA52_RS14420 PF02540 NAD synthase DNA52_RS14425 PF08240 Alcohol dehydrogenase GroES-like domain DNA52_RS14425 PF00107 Zinc-binding dehydrogenase DNA52_RS14430 PF02110 Hydroxyethylthiazole kinase family DNA52_RS14435 PF08543 Phosphomethylpyrimidine kinase DNA52_RS14440 PF02581 Thiamine monophosphate synthase DNA52_RS14450 PF07722 Peptidase C26 DNA52_RS14460 PF13344 Haloacid dehalogenase-like hydrolase DNA52_RS14460 PF00293 NUDIX domain DNA52_RS14465 PF00324 Amino acid permease DNA52_RS14475 PF00561 alpha/beta hydrolase fold DNA52_RS14480 PF00690 Cation transporter/ATPase, N-terminus DNA52_RS14480 PF00689 Cation transporting ATPase, C-terminus DNA52_RS14485 PF01048 Phosphorylase superfamily DNA52_RS14495 PF04024 PspC domain DNA52_RS14510 PF00011 Hsp20/alpha crystallin family DNA52_RS14530 PF00083 Sugar (and other) transporter DNA52_RS14530 PF07690 Major Facilitator Superfamily DNA52_RS14540 PF07690 Major Facilitator Superfamily DNA52_RS14545 PF00248 Aldo/keto reductase family DNA52_RS14550 PF00248 Aldo/keto reductase family DNA52_RS14560 PF06100 MCRA family DNA52_RS14575 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DNA52_RS14580 PF02361 Cobalt transport protein DNA52_RS14585 PF12558 ATP-binding cassette cobalt transporter DNA52_RS14585 PF00005 ABC transporter DNA52_RS14590 PF07155 ECF-type riboflavin transporter, S component DNA52_RS14595 PF07702 UTRA domain DNA52_RS14595 PF00392 Bacterial regulatory proteins, gntR family DNA52_RS14620 PF00106 short chain dehydrogenase DNA52_RS14625 PF13732 Domain of unknown function (DUF4162) DNA52_RS14625 PF00005 ABC transporter DNA52_RS14640 PF00766 Electron transfer flavoprotein FAD-binding domain DNA52_RS14640 PF01012 Electron transfer flavoprotein domain DNA52_RS14645 PF12822 ECF transporter, substrate-specific component DNA52_RS14650 PF00440 Bacterial regulatory proteins, tetR family DNA52_RS14650 PF14278 Transcriptional regulator C-terminal region DNA52_RS14655 PF02733 Dak1 domain DNA52_RS14660 PF02733 Dak1 domain DNA52_RS14665 PF02734 DAK2 domain DNA52_RS14670 PF03610 PTS system fructose IIA component DNA52_RS14675 PF00230 Major intrinsic protein DNA52_RS14680 PF00356 Bacterial regulatory proteins, lacI family DNA52_RS14685 PF00356 Bacterial regulatory proteins, lacI family DNA52_RS14690 PF00128 Alpha amylase, catalytic domain DNA52_RS14695 PF13416 Bacterial extracellular solute-binding protein DNA52_RS14700 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS14705 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS14715 PF00128 Alpha amylase, catalytic domain DNA52_RS14715 PF11896 Domain of unknown function (DUF3416) DNA52_RS14720 PF17912 MalK OB fold domain DNA52_RS14720 PF03459 TOBE domain DNA52_RS14720 PF00005 ABC transporter DNA52_RS14725 PF03632 Glycosyl hydrolase family 65 central catalytic domain DNA52_RS14725 PF03633 Glycosyl hydrolase family 65, C-terminal domain DNA52_RS14725 PF03636 Glycosyl hydrolase family 65, N-terminal domain DNA52_RS14740 PF00480 ROK family DNA52_RS14745 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DNA52_RS14745 PF00367 phosphotransferase system, EIIB DNA52_RS14745 PF02378 Phosphotransferase system, EIIC DNA52_RS14750 PF00251 Glycosyl hydrolases family 32 N-terminal domain DNA52_RS14750 PF08244 Glycosyl hydrolases family 32 C terminal DNA52_RS14755 PF00356 Bacterial regulatory proteins, lacI family DNA52_RS14760 PF00128 Alpha amylase, catalytic domain DNA52_RS14770 PF03553 Na+/H+ antiporter family DNA52_RS14775 PF00128 Alpha amylase, catalytic domain DNA52_RS14780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DNA52_RS14780 PF03466 LysR substrate binding domain DNA52_RS14795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNA52_RS14800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DNA52_RS14810 PF01842 ACT domain DNA52_RS14810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DNA52_RS14810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DNA52_RS14815 PF00266 Aminotransferase class-V DNA52_RS14820 PF00300 Histidine phosphatase superfamily (branch 1) DNA52_RS14825 PF00248 Aldo/keto reductase family DNA52_RS14840 PF05670 NFACT protein RNA binding domain DNA52_RS14845 PF00871 Acetokinase family DNA52_RS14855 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DNA52_RS14860 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DNA52_RS14865 PF00005 ABC transporter DNA52_RS14865 PF12848 ABC transporter DNA52_RS14875 PF00005 ABC transporter DNA52_RS14885 PF00255 Glutathione peroxidase DNA52_RS14890 PF00248 Aldo/keto reductase family DNA52_RS14895 PF01272 Transcription elongation factor, GreA/GreB, C-term DNA52_RS14895 PF03449 Transcription elongation factor, N-terminal DNA52_RS14910 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DNA52_RS14920 PF00890 FAD binding domain DNA52_RS14920 PF14537 Cytochrome c3 DNA52_RS14930 PF03577 Peptidase family C69 DNA52_RS14935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DNA52_RS14935 PF02378 Phosphotransferase system, EIIC DNA52_RS14945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DNA52_RS14950 PF01232 Mannitol dehydrogenase Rossmann domain DNA52_RS14950 PF08125 Mannitol dehydrogenase C-terminal domain DNA52_RS14960 PF00085 Thioredoxin DNA52_RS14980 PF00334 Nucleoside diphosphate kinase DNA52_RS14990 PF03358 NADPH-dependent FMN reductase DNA52_RS14995 PF07702 UTRA domain DNA52_RS14995 PF00392 Bacterial regulatory proteins, gntR family DNA52_RS15000 PF02378 Phosphotransferase system, EIIC DNA52_RS15015 PF01979 Amidohydrolase family DNA52_RS15020 PF03841 L-seryl-tRNA selenium transferase DNA52_RS15035 PF00132 Bacterial transferase hexapeptide (six repeats) DNA52_RS15040 PF01053 Cys/Met metabolism PLP-dependent enzyme DNA52_RS15045 PF00291 Pyridoxal-phosphate dependent enzyme DNA52_RS15050 PF00557 Metallopeptidase family M24 DNA52_RS15075 PF00392 Bacterial regulatory proteins, gntR family DNA52_RS15075 PF07702 UTRA domain DNA52_RS15080 PF16657 Maltogenic Amylase, C-terminal domain DNA52_RS15080 PF00128 Alpha amylase, catalytic domain DNA52_RS15085 PF00367 phosphotransferase system, EIIB DNA52_RS15085 PF02378 Phosphotransferase system, EIIC DNA52_RS15085 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DNA52_RS15090 PF00367 phosphotransferase system, EIIB DNA52_RS15090 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DNA52_RS15090 PF02378 Phosphotransferase system, EIIC DNA52_RS15100 PF02441 Flavoprotein DNA52_RS15110 PF02082 Transcriptional regulator DNA52_RS15115 PF00440 Bacterial regulatory proteins, tetR family DNA52_RS15120 PF01566 Natural resistance-associated macrophage protein DNA52_RS15140 PF07690 Major Facilitator Superfamily DNA52_RS15150 PF18719 ArlS sensor domain DNA52_RS15150 PF00512 His Kinase A (phospho-acceptor) domain DNA52_RS15150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DNA52_RS15155 PF00486 Transcriptional regulatory protein, C terminal DNA52_RS15155 PF00072 Response regulator receiver domain DNA52_RS15165 PF01380 SIS domain DNA52_RS15165 PF01418 Helix-turn-helix domain, rpiR family DNA52_RS15170 PF02378 Phosphotransferase system, EIIC DNA52_RS15185 PF03816 Cell envelope-related transcriptional attenuator domain DNA52_RS15190 PF01565 FAD binding domain DNA52_RS15190 PF02913 FAD linked oxidases, C-terminal domain DNA52_RS15200 PF04607 Region found in RelA / SpoT proteins DNA52_RS15210 PF03176 MMPL family DNA52_RS15215 PF03352 Methyladenine glycosylase DNA52_RS15225 PF02687 FtsX-like permease family DNA52_RS15225 PF12704 MacB-like periplasmic core domain DNA52_RS15230 PF00005 ABC transporter DNA52_RS15245 PF06737 Transglycosylase-like domain DNA52_RS15250 PF01476 LysM domain DNA52_RS15250 PF05257 CHAP domain DNA52_RS15280 PF00871 Acetokinase family DNA52_RS15290 PF01047 MarR family DNA52_RS15295 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNA52_RS15320 PF13416 Bacterial extracellular solute-binding protein DNA52_RS15335 PF08402 TOBE domain DNA52_RS15335 PF00005 ABC transporter DNA52_RS15365 PF00392 Bacterial regulatory proteins, gntR family DNA52_RS15370 PF00005 ABC transporter DNA52_RS15380 PF00171 Aldehyde dehydrogenase family DNA52_RS15380 PF00465 Iron-containing alcohol dehydrogenase DNA52_RS15385 PF01116 Fructose-bisphosphate aldolase class-II DNA52_RS15410 PF03577 Peptidase family C69 DNA52_RS15420 PF02632 BioY family DNA52_RS15435 PF00155 Aminotransferase class I and II DNA52_RS15445 PF01061 ABC-2 type transporter DNA52_RS15450 PF00005 ABC transporter DNA52_RS15465 PF07690 Major Facilitator Superfamily DNA52_RS15470 PF00909 Ammonium Transporter Family DNA52_RS15475 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DNA52_RS15475 PF00056 lactate/malate dehydrogenase, NAD binding domain DNA52_RS15490 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DNA52_RS15495 PF07732 Multicopper oxidase DNA52_RS15495 PF07731 Multicopper oxidase DNA52_RS15500 PF06993 Protein of unknown function (DUF1304) DNA52_RS15505 PF01161 Phosphatidylethanolamine-binding protein DNA52_RS15530 PF01156 Inosine-uridine preferring nucleoside hydrolase DNA52_RS15535 PF00106 short chain dehydrogenase DNA52_RS15545 PF00075 RNase H DNA52_RS15550 PF00528 Binding-protein-dependent transport system inner membrane component DNA52_RS15555 PF00005 ABC transporter DNA52_RS15560 PF07992 Pyridine nucleotide-disulphide oxidoreductase DNA52_RS15560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DNA52_RS15565 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DNA52_RS15565 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DNA52_RS15570 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DNA52_RS15570 PF01266 FAD dependent oxidoreductase DNA52_RS15575 PF00230 Major intrinsic protein