locus-tag class description ALX04_RS00015 PF00485 Phosphoribulokinase / Uridine kinase family ALX04_RS00030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALX04_RS00030 PF03466 LysR substrate binding domain ALX04_RS00035 PF00890 FAD binding domain ALX04_RS00035 PF14537 Cytochrome c3 ALX04_RS00045 PF02525 Flavodoxin-like fold ALX04_RS00050 PF00152 tRNA synthetases class II (D, K and N) ALX04_RS00050 PF01336 OB-fold nucleic acid binding domain ALX04_RS00055 PF03590 Aspartate-ammonia ligase ALX04_RS00060 PF03577 Peptidase family C69 ALX04_RS00080 PF00271 Helicase conserved C-terminal domain ALX04_RS00080 PF09382 RQC domain ALX04_RS00080 PF00270 DEAD/DEAH box helicase ALX04_RS00080 PF16124 RecQ zinc-binding ALX04_RS00080 PF00570 HRDC domain ALX04_RS00085 PF00849 RNA pseudouridylate synthase ALX04_RS00090 PF01022 Bacterial regulatory protein, arsR family ALX04_RS00120 PF00106 short chain dehydrogenase ALX04_RS00120 PF00300 Histidine phosphatase superfamily (branch 1) ALX04_RS00130 PF07859 alpha/beta hydrolase fold ALX04_RS00140 PF08245 Mur ligase middle domain ALX04_RS00140 PF02875 Mur ligase family, glutamate ligase domain ALX04_RS00140 PF01225 Mur ligase family, catalytic domain ALX04_RS00145 PF13840 ACT domain ALX04_RS00145 PF00696 Amino acid kinase family ALX04_RS00150 PF13537 Glutamine amidotransferase domain ALX04_RS00150 PF00733 Asparagine synthase ALX04_RS00210 PF07690 Major Facilitator Superfamily ALX04_RS00230 PF00313 'Cold-shock' DNA-binding domain ALX04_RS00235 PF06738 Putative threonine/serine exporter ALX04_RS00245 PF03816 Cell envelope-related transcriptional attenuator domain ALX04_RS00265 PF02082 Transcriptional regulator ALX04_RS00270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ALX04_RS00270 PF00205 Thiamine pyrophosphate enzyme, central domain ALX04_RS00270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALX04_RS00275 PF00324 Amino acid permease ALX04_RS00285 PF01712 Deoxynucleoside kinase ALX04_RS00290 PF02403 Seryl-tRNA synthetase N-terminal domain ALX04_RS00290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ALX04_RS00330 PF05848 CtsR N-terminal HTH domain ALX04_RS00330 PF17727 CtsR C-terminal dimerization domain ALX04_RS00340 PF00440 Bacterial regulatory proteins, tetR family ALX04_RS00340 PF08360 QacR-like protein, C-terminal region ALX04_RS00345 PF04560 RNA polymerase Rpb2, domain 7 ALX04_RS00345 PF04563 RNA polymerase beta subunit ALX04_RS00345 PF04561 RNA polymerase Rpb2, domain 2 ALX04_RS00345 PF04565 RNA polymerase Rpb2, domain 3 ALX04_RS00345 PF10385 RNA polymerase beta subunit external 1 domain ALX04_RS00345 PF00562 RNA polymerase Rpb2, domain 6 ALX04_RS00350 PF00623 RNA polymerase Rpb1, domain 2 ALX04_RS00350 PF04983 RNA polymerase Rpb1, domain 3 ALX04_RS00350 PF04998 RNA polymerase Rpb1, domain 5 ALX04_RS00350 PF05000 RNA polymerase Rpb1, domain 4 ALX04_RS00350 PF04997 RNA polymerase Rpb1, domain 1 ALX04_RS00355 PF01478 Type IV leader peptidase family ALX04_RS00355 PF06750 Bacterial Peptidase A24 N-terminal domain ALX04_RS00360 PF00164 Ribosomal protein S12/S23 ALX04_RS00365 PF00177 Ribosomal protein S7p/S5e ALX04_RS00370 PF14492 Elongation Factor G, domain II ALX04_RS00370 PF03764 Elongation factor G, domain IV ALX04_RS00370 PF00009 Elongation factor Tu GTP binding domain ALX04_RS00370 PF03144 Elongation factor Tu domain 2 ALX04_RS00370 PF00679 Elongation factor G C-terminus ALX04_RS00375 PF00338 Ribosomal protein S10p/S20e ALX04_RS00380 PF00297 Ribosomal protein L3 ALX04_RS00385 PF00573 Ribosomal protein L4/L1 family ALX04_RS00390 PF00276 Ribosomal protein L23 ALX04_RS00395 PF00181 Ribosomal Proteins L2, RNA binding domain ALX04_RS00395 PF03947 Ribosomal Proteins L2, C-terminal domain ALX04_RS00400 PF00203 Ribosomal protein S19 ALX04_RS00405 PF00237 Ribosomal protein L22p/L17e ALX04_RS00410 PF07650 KH domain ALX04_RS00410 PF00189 Ribosomal protein S3, C-terminal domain ALX04_RS00415 PF00252 Ribosomal protein L16p/L10e ALX04_RS00420 PF00831 Ribosomal L29 protein ALX04_RS00425 PF00366 Ribosomal protein S17 ALX04_RS00430 PF00238 Ribosomal protein L14p/L23e ALX04_RS00435 PF00467 KOW motif ALX04_RS00435 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ALX04_RS00440 PF00281 Ribosomal protein L5 ALX04_RS00440 PF00673 ribosomal L5P family C-terminus ALX04_RS00445 PF00253 Ribosomal protein S14p/S29e ALX04_RS00450 PF00410 Ribosomal protein S8 ALX04_RS00455 PF00347 Ribosomal protein L6 ALX04_RS00460 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ALX04_RS00465 PF03719 Ribosomal protein S5, C-terminal domain ALX04_RS00465 PF00333 Ribosomal protein S5, N-terminal domain ALX04_RS00470 PF00327 Ribosomal protein L30p/L7e ALX04_RS00475 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ALX04_RS00480 PF00344 SecY translocase ALX04_RS00485 PF05191 Adenylate kinase, active site lid ALX04_RS00490 PF01176 Translation initiation factor 1A / IF-1 ALX04_RS00495 PF00444 Ribosomal protein L36 ALX04_RS00500 PF00416 Ribosomal protein S13/S18 ALX04_RS00505 PF00411 Ribosomal protein S11 ALX04_RS00510 PF01000 RNA polymerase Rpb3/RpoA insert domain ALX04_RS00510 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ALX04_RS00510 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ALX04_RS00515 PF01196 Ribosomal protein L17 ALX04_RS00520 PF00348 Polyprenyl synthetase ALX04_RS00540 PF04205 FMN-binding domain ALX04_RS00545 PF02424 ApbE family ALX04_RS00550 PF00005 ABC transporter ALX04_RS00555 PF00005 ABC transporter ALX04_RS00560 PF02361 Cobalt transport protein ALX04_RS00565 PF01416 tRNA pseudouridine synthase ALX04_RS00570 PF00572 Ribosomal protein L13 ALX04_RS00575 PF00380 Ribosomal protein S9/S16 ALX04_RS00580 PF02645 Uncharacterised protein, DegV family COG1307 ALX04_RS00595 PF02780 Transketolase, C-terminal domain ALX04_RS00595 PF00456 Transketolase, thiamine diphosphate binding domain ALX04_RS00595 PF02779 Transketolase, pyrimidine binding domain ALX04_RS00600 PF08501 Shikimate dehydrogenase substrate binding domain ALX04_RS00600 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ALX04_RS00605 PF00793 DAHP synthetase I family ALX04_RS00605 PF18152 DAHP synthase ferredoxin-like domain ALX04_RS00610 PF01761 3-dehydroquinate synthase ALX04_RS00620 PF01883 Iron-sulfur cluster assembly protein ALX04_RS00625 PF05683 Fumarase C-terminus ALX04_RS00630 PF05681 Fumarate hydratase (Fumerase) ALX04_RS00635 PF02311 AraC-like ligand binding domain ALX04_RS00635 PF12833 Helix-turn-helix domain ALX04_RS00640 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ALX04_RS00645 PF00005 ABC transporter ALX04_RS00650 PF00950 ABC 3 transport family ALX04_RS00655 PF01297 Zinc-uptake complex component A periplasmic ALX04_RS00665 PF00056 lactate/malate dehydrogenase, NAD binding domain ALX04_RS00665 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ALX04_RS00670 PF00939 Sodium:sulfate symporter transmembrane region ALX04_RS00680 PF03949 Malic enzyme, NAD binding domain ALX04_RS00680 PF00390 Malic enzyme, N-terminal domain ALX04_RS00685 PF08218 Citrate lyase ligase C-terminal domain ALX04_RS00690 PF06857 Malonate decarboxylase delta subunit (MdcD) ALX04_RS00695 PF03328 HpcH/HpaI aldolase/citrate lyase family ALX04_RS00700 PF04223 Citrate lyase, alpha subunit (CitF) ALX04_RS00705 PF00665 Integrase core domain ALX04_RS00705 PF13936 Helix-turn-helix domain ALX04_RS00715 PF13936 Helix-turn-helix domain ALX04_RS00740 PF10415 Fumarase C C-terminus ALX04_RS00740 PF00206 Lyase ALX04_RS00745 PF00890 FAD binding domain ALX04_RS00745 PF14537 Cytochrome c3 ALX04_RS00750 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ALX04_RS00750 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase ALX04_RS00755 PF03466 LysR substrate binding domain ALX04_RS00755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALX04_RS00760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALX04_RS00760 PF03466 LysR substrate binding domain ALX04_RS00765 PF03949 Malic enzyme, NAD binding domain ALX04_RS00765 PF00390 Malic enzyme, N-terminal domain ALX04_RS00775 PF13520 Amino acid permease ALX04_RS00780 PF12822 ECF transporter, substrate-specific component ALX04_RS00795 PF01654 Cytochrome bd terminal oxidase subunit I ALX04_RS00800 PF02322 Cytochrome bd terminal oxidase subunit II ALX04_RS00805 PF00005 ABC transporter ALX04_RS00805 PF00664 ABC transporter transmembrane region ALX04_RS00810 PF00005 ABC transporter ALX04_RS00810 PF00664 ABC transporter transmembrane region ALX04_RS00825 PF00348 Polyprenyl synthetase ALX04_RS00835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ALX04_RS00835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ALX04_RS00840 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ALX04_RS00840 PF13457 GW (Gly-Tryp) dipeptide domain ALX04_RS00850 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ALX04_RS00855 PF02222 ATP-grasp domain ALX04_RS00855 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ALX04_RS00860 PF00580 UvrD/REP helicase N-terminal domain ALX04_RS00860 PF13361 UvrD-like helicase C-terminal domain ALX04_RS00865 PF00533 BRCA1 C Terminus (BRCT) domain ALX04_RS00865 PF01653 NAD-dependent DNA ligase adenylation domain ALX04_RS00865 PF03120 NAD-dependent DNA ligase OB-fold domain ALX04_RS00865 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ALX04_RS00865 PF12826 Helix-hairpin-helix motif ALX04_RS00870 PF07537 CamS sex pheromone cAM373 precursor ALX04_RS00875 PF02686 Glu-tRNAGln amidotransferase C subunit ALX04_RS00880 PF01425 Amidase ALX04_RS00885 PF02934 GatB/GatE catalytic domain ALX04_RS00885 PF02637 GatB domain ALX04_RS00890 PF00781 Diacylglycerol kinase catalytic domain ALX04_RS00895 PF05958 tRNA (Uracil-5-)-methyltransferase ALX04_RS00895 PF01938 TRAM domain ALX04_RS00910 PF02378 Phosphotransferase system, EIIC ALX04_RS00920 PF01418 Helix-turn-helix domain, rpiR family ALX04_RS00920 PF01380 SIS domain ALX04_RS00935 PF00313 'Cold-shock' DNA-binding domain ALX04_RS00940 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ALX04_RS00940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ALX04_RS00945 PF00270 DEAD/DEAH box helicase ALX04_RS00945 PF00271 Helicase conserved C-terminal domain ALX04_RS00960 PF02378 Phosphotransferase system, EIIC ALX04_RS00985 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ALX04_RS00985 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ALX04_RS00995 PF02350 UDP-N-acetylglucosamine 2-epimerase ALX04_RS01005 PF00230 Major intrinsic protein ALX04_RS01035 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ALX04_RS01035 PF00535 Glycosyl transferase family 2 ALX04_RS01040 PF00132 Bacterial transferase hexapeptide (six repeats) ALX04_RS01070 PF00483 Nucleotidyl transferase ALX04_RS01075 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ALX04_RS01080 PF16363 GDP-mannose 4,6 dehydratase ALX04_RS01085 PF04321 RmlD substrate binding domain ALX04_RS01095 PF00589 Phage integrase family ALX04_RS01105 PF13614 AAA domain ALX04_RS01115 PF02397 Bacterial sugar transferase ALX04_RS01120 PF00535 Glycosyl transferase family 2 ALX04_RS01135 PF00535 Glycosyl transferase family 2 ALX04_RS01140 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ALX04_RS01145 PF01943 Polysaccharide biosynthesis protein ALX04_RS01150 PF00483 Nucleotidyl transferase ALX04_RS01180 PF03275 UDP-galactopyranose mutase ALX04_RS01220 PF02397 Bacterial sugar transferase ALX04_RS01230 PF02397 Bacterial sugar transferase ALX04_RS01265 PF02631 RecX family ALX04_RS01270 PF04167 Protein of unknown function (DUF402) ALX04_RS01275 PF01476 LysM domain ALX04_RS01275 PF00877 NlpC/P60 family ALX04_RS01275 PF08239 Bacterial SH3 domain ALX04_RS01295 PF00056 lactate/malate dehydrogenase, NAD binding domain ALX04_RS01295 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ALX04_RS01300 PF01594 AI-2E family transporter ALX04_RS01305 PF01467 Cytidylyltransferase-like ALX04_RS01310 PF02447 GntP family permease ALX04_RS01315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ALX04_RS01315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ALX04_RS01320 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ALX04_RS01320 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ALX04_RS01325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALX04_RS01325 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALX04_RS01330 PF00009 Elongation factor Tu GTP binding domain ALX04_RS01330 PF03144 Elongation factor Tu domain 2 ALX04_RS01330 PF16658 Class II release factor RF3, C-terminal domain ALX04_RS01350 PF03466 LysR substrate binding domain ALX04_RS01350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALX04_RS01365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALX04_RS01370 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS01375 PF12911 N-terminal TM domain of oligopeptide transport permease C ALX04_RS01375 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS01380 PF00005 ABC transporter ALX04_RS01380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALX04_RS01385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALX04_RS01385 PF00005 ABC transporter ALX04_RS01395 PF00589 Phage integrase family ALX04_RS01400 PF10431 C-terminal, D2-small domain, of ClpB protein ALX04_RS01400 PF17871 AAA lid domain ALX04_RS01400 PF07724 AAA domain (Cdc48 subfamily) ALX04_RS01400 PF00004 ATPase family associated with various cellular activities (AAA) ALX04_RS01410 PF00381 PTS HPr component phosphorylation site ALX04_RS01415 PF05524 PEP-utilising enzyme, N-terminal ALX04_RS01415 PF00391 PEP-utilising enzyme, mobile domain ALX04_RS01415 PF02896 PEP-utilising enzyme, TIM barrel domain ALX04_RS01420 PF13439 Glycosyltransferase Family 4 ALX04_RS01420 PF00534 Glycosyl transferases group 1 ALX04_RS01425 PF13439 Glycosyltransferase Family 4 ALX04_RS01425 PF00534 Glycosyl transferases group 1 ALX04_RS01435 PF00768 D-alanyl-D-alanine carboxypeptidase ALX04_RS01435 PF07943 Penicillin-binding protein 5, C-terminal domain ALX04_RS01440 PF00155 Aminotransferase class I and II ALX04_RS01445 PF08796 Protein of unknown function (DUF1797) ALX04_RS01450 PF00884 Sulfatase ALX04_RS01540 PF00156 Phosphoribosyl transferase domain ALX04_RS01560 PF00149 Calcineurin-like phosphoesterase ALX04_RS01570 PF01566 Natural resistance-associated macrophage protein ALX04_RS01575 PF00762 Ferrochelatase ALX04_RS01580 PF00324 Amino acid permease ALX04_RS01585 PF02574 Homocysteine S-methyltransferase ALX04_RS01590 PF00534 Glycosyl transferases group 1 ALX04_RS01590 PF00862 Sucrose synthase ALX04_RS01600 PF02773 S-adenosylmethionine synthetase, C-terminal domain ALX04_RS01600 PF02772 S-adenosylmethionine synthetase, central domain ALX04_RS01600 PF00438 S-adenosylmethionine synthetase, N-terminal domain ALX04_RS01605 PF07690 Major Facilitator Superfamily ALX04_RS01620 PF00862 Sucrose synthase ALX04_RS01620 PF00534 Glycosyl transferases group 1 ALX04_RS01625 PF00534 Glycosyl transferases group 1 ALX04_RS01640 PF06962 Putative rRNA methylase ALX04_RS01645 PF01569 PAP2 superfamily ALX04_RS01650 PF09334 tRNA synthetases class I (M) ALX04_RS01650 PF13603 Leucyl-tRNA synthetase, Domain 2 ALX04_RS01650 PF00133 tRNA synthetases class I (I, L, M and V) ALX04_RS01650 PF08264 Anticodon-binding domain of tRNA ALX04_RS01655 PF01943 Polysaccharide biosynthesis protein ALX04_RS01655 PF14667 Polysaccharide biosynthesis C-terminal domain ALX04_RS01660 PF00849 RNA pseudouridylate synthase ALX04_RS01660 PF01479 S4 domain ALX04_RS01665 PF01256 Carbohydrate kinase ALX04_RS01670 PF01546 Peptidase family M20/M25/M40 ALX04_RS01680 PF00005 ABC transporter ALX04_RS01680 PF17912 MalK OB fold domain ALX04_RS01685 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS01690 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS01700 PF03009 Glycerophosphoryl diester phosphodiesterase family ALX04_RS01705 PF01712 Deoxynucleoside kinase ALX04_RS01710 PF01741 Large-conductance mechanosensitive channel, MscL ALX04_RS01735 PF04397 LytTr DNA-binding domain ALX04_RS01735 PF00072 Response regulator receiver domain ALX04_RS01745 PF01625 Peptide methionine sulfoxide reductase ALX04_RS01750 PF13411 MerR HTH family regulatory protein ALX04_RS01760 PF00892 EamA-like transporter family ALX04_RS01785 PF00072 Response regulator receiver domain ALX04_RS01785 PF04397 LytTr DNA-binding domain ALX04_RS01805 PF01047 MarR family ALX04_RS01820 PF00005 ABC transporter ALX04_RS01820 PF17755 UvrA DNA-binding domain ALX04_RS01820 PF17760 UvrA interaction domain ALX04_RS01855 PF07457 Protein of unknown function (DUF1516) ALX04_RS01860 PF02574 Homocysteine S-methyltransferase ALX04_RS01860 PF02219 Methylenetetrahydrofolate reductase ALX04_RS01865 PF08267 Cobalamin-independent synthase, N-terminal domain ALX04_RS01865 PF01717 Cobalamin-independent synthase, Catalytic domain ALX04_RS01875 PF01747 ATP-sulfurylase ALX04_RS01875 PF14306 PUA-like domain ALX04_RS01885 PF01368 DHH family ALX04_RS01885 PF02272 DHHA1 domain ALX04_RS01895 PF03600 Citrate transporter ALX04_RS01895 PF02080 TrkA-C domain ALX04_RS01900 PF01554 MatE ALX04_RS01920 PF13673 Acetyltransferase (GNAT) domain ALX04_RS01925 PF05746 DALR anticodon binding domain ALX04_RS01925 PF03485 Arginyl tRNA synthetase N terminal domain ALX04_RS01925 PF00750 tRNA synthetases class I (R) ALX04_RS01935 PF02687 FtsX-like permease family ALX04_RS01935 PF00005 ABC transporter ALX04_RS01935 PF12704 MacB-like periplasmic core domain ALX04_RS01945 PF00874 PRD domain ALX04_RS01945 PF00158 Sigma-54 interaction domain ALX04_RS01965 PF02378 Phosphotransferase system, EIIC ALX04_RS01970 PF00232 Glycosyl hydrolase family 1 ALX04_RS01980 PF03734 L,D-transpeptidase catalytic domain ALX04_RS01985 PF00550 Phosphopantetheine attachment site ALX04_RS01990 PF00155 Aminotransferase class I and II ALX04_RS01990 PF00392 Bacterial regulatory proteins, gntR family ALX04_RS02000 PF00155 Aminotransferase class I and II ALX04_RS02005 PF02863 Arginine repressor, C-terminal domain ALX04_RS02005 PF01316 Arginine repressor, DNA binding domain ALX04_RS02015 PF00912 Transglycosylase ALX04_RS02015 PF00905 Penicillin binding protein transpeptidase domain ALX04_RS02020 PF06133 Control of competence regulator ComK, YlbF/YmcA ALX04_RS02025 PF00149 Calcineurin-like phosphoesterase ALX04_RS02030 PF13514 AAA domain ALX04_RS02035 PF01966 HD domain ALX04_RS02050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALX04_RS02050 PF03466 LysR substrate binding domain ALX04_RS02055 PF00890 FAD binding domain ALX04_RS02055 PF04205 FMN-binding domain ALX04_RS02055 PF03358 NADPH-dependent FMN reductase ALX04_RS02060 PF00890 FAD binding domain ALX04_RS02060 PF03358 NADPH-dependent FMN reductase ALX04_RS02060 PF04205 FMN-binding domain ALX04_RS02080 PF00535 Glycosyl transferase family 2 ALX04_RS02100 PF01872 RibD C-terminal domain ALX04_RS02100 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ALX04_RS02105 PF00677 Lumazine binding domain ALX04_RS02110 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ALX04_RS02110 PF00925 GTP cyclohydrolase II ALX04_RS02115 PF00885 6,7-dimethyl-8-ribityllumazine synthase ALX04_RS02130 PF07238 PilZ domain ALX04_RS02130 PF00535 Glycosyl transferase family 2 ALX04_RS02130 PF03552 Cellulose synthase ALX04_RS02130 PF03170 Bacterial cellulose synthase subunit ALX04_RS02140 PF00440 Bacterial regulatory proteins, tetR family ALX04_RS02140 PF14278 Transcriptional regulator C-terminal region ALX04_RS02155 PF13545 Crp-like helix-turn-helix domain ALX04_RS02155 PF00027 Cyclic nucleotide-binding domain ALX04_RS02165 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALX04_RS02165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALX04_RS02195 PF00639 PPIC-type PPIASE domain ALX04_RS02205 PF01230 HIT domain ALX04_RS02210 PF00005 ABC transporter ALX04_RS02215 PF05975 Bacterial ABC transporter protein EcsB ALX04_RS02220 PF01636 Phosphotransferase enzyme family ALX04_RS02225 PF02390 Putative methyltransferase ALX04_RS02235 PF01588 Putative tRNA binding domain ALX04_RS02235 PF14794 Domain of unknown function (DUF4479) ALX04_RS02240 PF01580 FtsK/SpoIIIE family ALX04_RS02240 PF09397 Ftsk gamma domain ALX04_RS02240 PF17854 FtsK alpha domain ALX04_RS02245 PF08245 Mur ligase middle domain ALX04_RS02245 PF01225 Mur ligase family, catalytic domain ALX04_RS02245 PF02875 Mur ligase family, glutamate ligase domain ALX04_RS02255 PF02421 Ferrous iron transport protein B ALX04_RS02255 PF17910 FeoB cytosolic helical domain ALX04_RS02255 PF07664 Ferrous iron transport protein B C terminus ALX04_RS02255 PF07670 Nucleoside recognition ALX04_RS02265 PF00005 ABC transporter ALX04_RS02270 PF01458 Uncharacterized protein family (UPF0051) ALX04_RS02275 PF00266 Aminotransferase class-V ALX04_RS02280 PF01592 NifU-like N terminal domain ALX04_RS02285 PF01458 Uncharacterized protein family (UPF0051) ALX04_RS02290 PF01883 Iron-sulfur cluster assembly protein ALX04_RS02300 PF01027 Inhibitor of apoptosis-promoting Bax1 ALX04_RS02305 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ALX04_RS02305 PF00476 DNA polymerase family A ALX04_RS02305 PF01367 5'-3' exonuclease, C-terminal SAM fold ALX04_RS02310 PF06827 Zinc finger found in FPG and IleRS ALX04_RS02310 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ALX04_RS02310 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ALX04_RS02315 PF01121 Dephospho-CoA kinase ALX04_RS02320 PF03477 ATP cone domain ALX04_RS02325 PF07261 Replication initiation and membrane attachment ALX04_RS02330 PF07319 Primosomal protein DnaI N-terminus ALX04_RS02330 PF01695 IstB-like ATP binding protein ALX04_RS02335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ALX04_RS02335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ALX04_RS02335 PF02824 TGS domain ALX04_RS02335 PF03129 Anticodon binding domain ALX04_RS02340 PF00707 Translation initiation factor IF-3, C-terminal domain ALX04_RS02340 PF05198 Translation initiation factor IF-3, N-terminal domain ALX04_RS02345 PF01632 Ribosomal protein L35 ALX04_RS02350 PF00453 Ribosomal protein L20 ALX04_RS02360 PF12002 MgsA AAA+ ATPase C terminal ALX04_RS02360 PF05496 Holliday junction DNA helicase RuvB P-loop domain ALX04_RS02360 PF16193 AAA C-terminal domain ALX04_RS02370 PF01638 HxlR-like helix-turn-helix ALX04_RS02375 PF01177 Asp/Glu/Hydantoin racemase ALX04_RS02385 PF00535 Glycosyl transferase family 2 ALX04_RS02400 PF01926 50S ribosome-binding GTPase ALX04_RS02405 PF01985 CRS1 / YhbY (CRM) domain ALX04_RS02410 PF01467 Cytidylyltransferase-like ALX04_RS02415 PF01966 HD domain ALX04_RS02425 PF13649 Methyltransferase domain ALX04_RS02430 PF05636 HIGH Nucleotidyl Transferase ALX04_RS02440 PF01783 Ribosomal L32p protein family ALX04_RS02455 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ALX04_RS02455 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ALX04_RS02465 PF00072 Response regulator receiver domain ALX04_RS02465 PF00486 Transcriptional regulatory protein, C terminal ALX04_RS02470 PF00512 His Kinase A (phospho-acceptor) domain ALX04_RS02470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALX04_RS02470 PF18719 ArlS sensor domain ALX04_RS02480 PF13476 AAA domain ALX04_RS02485 PF12320 Type 5 capsule protein repressor C-terminal domain ALX04_RS02485 PF00149 Calcineurin-like phosphoesterase ALX04_RS02495 PF02096 60Kd inner membrane protein ALX04_RS02500 PF00708 Acylphosphatase ALX04_RS02505 PF00588 SpoU rRNA Methylase family ALX04_RS02505 PF08032 RNA 2'-O ribose methyltransferase substrate binding ALX04_RS02515 PF01638 HxlR-like helix-turn-helix ALX04_RS02520 PF01409 tRNA synthetases class II core domain (F) ALX04_RS02520 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ALX04_RS02525 PF01588 Putative tRNA binding domain ALX04_RS02525 PF03484 tRNA synthetase B5 domain ALX04_RS02525 PF03483 B3/4 domain ALX04_RS02525 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ALX04_RS02525 PF03147 Ferredoxin-fold anticodon binding domain ALX04_RS02530 PF02618 YceG-like family ALX04_RS02535 PF00485 Phosphoribulokinase / Uridine kinase family ALX04_RS02540 PF03449 Transcription elongation factor, N-terminal ALX04_RS02540 PF01272 Transcription elongation factor, GreA/GreB, C-term ALX04_RS02565 PF01521 Iron-sulphur cluster biosynthesis ALX04_RS02575 PF03717 Penicillin-binding Protein dimerisation domain ALX04_RS02575 PF00905 Penicillin binding protein transpeptidase domain ALX04_RS02580 PF00471 Ribosomal protein L33 ALX04_RS02585 PF01812 5-formyltetrahydrofolate cyclo-ligase family ALX04_RS02590 PF01694 Rhomboid family ALX04_RS02600 PF00480 ROK family ALX04_RS02620 PF03009 Glycerophosphoryl diester phosphodiesterase family ALX04_RS02630 PF13411 MerR HTH family regulatory protein ALX04_RS02635 PF03951 Glutamine synthetase, beta-Grasp domain ALX04_RS02635 PF00120 Glutamine synthetase, catalytic domain ALX04_RS02685 PF00829 Ribosomal prokaryotic L21 protein ALX04_RS02695 PF01016 Ribosomal L27 protein ALX04_RS02700 PF01321 Creatinase/Prolidase N-terminal domain ALX04_RS02700 PF00557 Metallopeptidase family M24 ALX04_RS02705 PF09285 Elongation factor P, C-terminal ALX04_RS02705 PF08207 Elongation factor P (EF-P) KOW-like domain ALX04_RS02705 PF01132 Elongation factor P (EF-P) OB domain ALX04_RS02710 PF03780 Asp23 family, cell envelope-related function ALX04_RS02715 PF01029 NusB family ALX04_RS02720 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ALX04_RS02720 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ALX04_RS02725 PF02601 Exonuclease VII, large subunit ALX04_RS02725 PF13742 OB-fold nucleic acid binding domain ALX04_RS02730 PF02609 Exonuclease VII small subunit ALX04_RS02735 PF00348 Polyprenyl synthetase ALX04_RS02740 PF01479 S4 domain ALX04_RS02740 PF01728 FtsJ-like methyltransferase ALX04_RS02745 PF02863 Arginine repressor, C-terminal domain ALX04_RS02745 PF01316 Arginine repressor, DNA binding domain ALX04_RS02750 PF13476 AAA domain ALX04_RS02755 PF00571 CBS domain ALX04_RS02755 PF00005 ABC transporter ALX04_RS02760 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS02765 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ALX04_RS02770 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS02780 PF00625 Guanylate kinase ALX04_RS02785 PF01192 RNA polymerase Rpb6 ALX04_RS02790 PF04127 DNA / pantothenate metabolism flavoprotein ALX04_RS02790 PF02441 Flavoprotein ALX04_RS02795 PF00271 Helicase conserved C-terminal domain ALX04_RS02795 PF17764 3′ DNA-binding domain (3′BD) ALX04_RS02795 PF04851 Type III restriction enzyme, res subunit ALX04_RS02795 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ALX04_RS02795 PF18074 Primosomal protein N C-terminal domain ALX04_RS02800 PF02911 Formyl transferase, C-terminal domain ALX04_RS02800 PF00551 Formyl transferase ALX04_RS02805 PF01189 16S rRNA methyltransferase RsmB/F ALX04_RS02805 PF01029 NusB family ALX04_RS02815 PF03793 PASTA domain ALX04_RS02815 PF00069 Protein kinase domain ALX04_RS02820 PF16745 RsgA N-terminal domain ALX04_RS02820 PF03193 RsgA GTPase ALX04_RS02825 PF00834 Ribulose-phosphate 3 epimerase family ALX04_RS02830 PF04263 Thiamin pyrophosphokinase, catalytic domain ALX04_RS02830 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain ALX04_RS02835 PF00830 Ribosomal L28 family ALX04_RS02840 PF03780 Asp23 family, cell envelope-related function ALX04_RS02845 PF13684 Dihydroxyacetone kinase family ALX04_RS02845 PF02734 DAK2 domain ALX04_RS02850 PF00271 Helicase conserved C-terminal domain ALX04_RS02850 PF17191 RecG wedge domain ALX04_RS02850 PF00270 DEAD/DEAH box helicase ALX04_RS02855 PF02504 Fatty acid synthesis protein ALX04_RS02860 PF00550 Phosphopantetheine attachment site ALX04_RS02865 PF00035 Double-stranded RNA binding motif ALX04_RS02865 PF14622 Ribonuclease-III-like ALX04_RS02870 PF06470 SMC proteins Flexible Hinge Domain ALX04_RS02870 PF02463 RecF/RecN/SMC N terminal domain ALX04_RS02875 PF00448 SRP54-type protein, GTPase domain ALX04_RS02875 PF02881 SRP54-type protein, helical bundle domain ALX04_RS02880 PF04297 Putative helix-turn-helix protein, YlxM / p13 like ALX04_RS02885 PF02881 SRP54-type protein, helical bundle domain ALX04_RS02885 PF02978 Signal peptide binding domain ALX04_RS02885 PF00448 SRP54-type protein, GTPase domain ALX04_RS02890 PF00886 Ribosomal protein S16 ALX04_RS02900 PF05239 PRC-barrel domain ALX04_RS02900 PF01782 RimM N-terminal domain ALX04_RS02905 PF01746 tRNA (Guanine-1)-methyltransferase ALX04_RS02910 PF01245 Ribosomal protein L19 ALX04_RS02930 PF00005 ABC transporter ALX04_RS02940 PF00425 chorismate binding enzyme ALX04_RS02940 PF04715 Anthranilate synthase component I, N terminal region ALX04_RS02945 PF00591 Glycosyl transferase family, a/b domain ALX04_RS02945 PF02885 Glycosyl transferase family, helical bundle domain ALX04_RS02945 PF00117 Glutamine amidotransferase class-I ALX04_RS02950 PF02885 Glycosyl transferase family, helical bundle domain ALX04_RS02950 PF00591 Glycosyl transferase family, a/b domain ALX04_RS02955 PF00218 Indole-3-glycerol phosphate synthase ALX04_RS02960 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ALX04_RS02965 PF00291 Pyridoxal-phosphate dependent enzyme ALX04_RS02970 PF00290 Tryptophan synthase alpha chain ALX04_RS02995 PF01546 Peptidase family M20/M25/M40 ALX04_RS02995 PF07687 Peptidase dimerisation domain ALX04_RS03000 PF08240 Alcohol dehydrogenase GroES-like domain ALX04_RS03000 PF00107 Zinc-binding dehydrogenase ALX04_RS03010 PF00106 short chain dehydrogenase ALX04_RS03020 PF07977 FabA-like domain ALX04_RS03025 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ALX04_RS03025 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ALX04_RS03030 PF00550 Phosphopantetheine attachment site ALX04_RS03035 PF00698 Acyl transferase domain ALX04_RS03045 PF00109 Beta-ketoacyl synthase, N-terminal domain ALX04_RS03045 PF02801 Beta-ketoacyl synthase, C-terminal domain ALX04_RS03050 PF00364 Biotin-requiring enzyme ALX04_RS03055 PF07977 FabA-like domain ALX04_RS03060 PF02785 Biotin carboxylase C-terminal domain ALX04_RS03060 PF00289 Biotin carboxylase, N-terminal domain ALX04_RS03060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALX04_RS03065 PF01039 Carboxyl transferase domain ALX04_RS03070 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ALX04_RS03085 PF04474 Protein of unknown function (DUF554) ALX04_RS03090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALX04_RS03090 PF03466 LysR substrate binding domain ALX04_RS03095 PF03061 Thioesterase superfamily ALX04_RS03100 PF03193 RsgA GTPase ALX04_RS03110 PF07690 Major Facilitator Superfamily ALX04_RS03160 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ALX04_RS03175 PF03073 TspO/MBR family ALX04_RS03185 PF05656 Protein of unknown function (DUF805) ALX04_RS03190 PF00781 Diacylglycerol kinase catalytic domain ALX04_RS03205 PF04226 Transglycosylase associated protein ALX04_RS03210 PF05532 CsbD-like ALX04_RS03220 PF03577 Peptidase family C69 ALX04_RS03225 PF01361 Tautomerase enzyme ALX04_RS03230 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ALX04_RS03230 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ALX04_RS03260 PF00202 Aminotransferase class-III ALX04_RS03265 PF13520 Amino acid permease ALX04_RS03275 PF01189 16S rRNA methyltransferase RsmB/F ALX04_RS03275 PF17126 RsmF rRNA methyltransferase first C-terminal domain ALX04_RS03275 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF ALX04_RS03290 PF03633 Glycosyl hydrolase family 65, C-terminal domain ALX04_RS03290 PF03632 Glycosyl hydrolase family 65 central catalytic domain ALX04_RS03290 PF03636 Glycosyl hydrolase family 65, N-terminal domain ALX04_RS03295 PF01263 Aldose 1-epimerase ALX04_RS03300 PF01070 FMN-dependent dehydrogenase ALX04_RS03305 PF00288 GHMP kinases N terminal domain ALX04_RS03305 PF08544 GHMP kinases C terminal ALX04_RS03315 PF00288 GHMP kinases N terminal domain ALX04_RS03325 PF04851 Type III restriction enzyme, res subunit ALX04_RS03325 PF00929 Exonuclease ALX04_RS03325 PF13307 Helicase C-terminal domain ALX04_RS03335 PF00155 Aminotransferase class I and II ALX04_RS03340 PF01336 OB-fold nucleic acid binding domain ALX04_RS03340 PF00152 tRNA synthetases class II (D, K and N) ALX04_RS03355 PF00005 ABC transporter ALX04_RS03355 PF09383 NIL domain ALX04_RS03360 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS03365 PF03180 NLPA lipoprotein ALX04_RS03375 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS03380 PF01547 Bacterial extracellular solute-binding protein ALX04_RS03385 PF00005 ABC transporter ALX04_RS03385 PF08402 TOBE domain ALX04_RS03390 PF00905 Penicillin binding protein transpeptidase domain ALX04_RS03390 PF00912 Transglycosylase ALX04_RS03395 PF03838 Recombination protein U ALX04_RS03400 PF06908 YspA SLOG family ALX04_RS03405 PF05103 DivIVA protein ALX04_RS03415 PF01170 Putative RNA methylase family UPF0020 ALX04_RS03415 PF02926 THUMP domain ALX04_RS03425 PF07690 Major Facilitator Superfamily ALX04_RS03430 PF00326 Prolyl oligopeptidase family ALX04_RS03440 PF00535 Glycosyl transferase family 2 ALX04_RS03460 PF02016 LD-carboxypeptidase N-terminal domain ALX04_RS03460 PF17676 LD-carboxypeptidase C-terminal domain ALX04_RS03475 PF00005 ABC transporter ALX04_RS03490 PF01266 FAD dependent oxidoreductase ALX04_RS03505 PF01268 Formate--tetrahydrofolate ligase ALX04_RS03510 PF01252 Signal peptidase (SPase) II ALX04_RS03515 PF01479 S4 domain ALX04_RS03515 PF00849 RNA pseudouridylate synthase ALX04_RS03520 PF00156 Phosphoribosyl transferase domain ALX04_RS03525 PF00117 Glutamine amidotransferase class-I ALX04_RS03525 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ALX04_RS03530 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ALX04_RS03530 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALX04_RS03530 PF02142 MGS-like domain ALX04_RS03535 PF00300 Histidine phosphatase superfamily (branch 1) ALX04_RS03540 PF08818 Domain of unknown function (DU1801) ALX04_RS03565 PF00005 ABC transporter ALX04_RS03570 PF12679 ABC-2 family transporter protein ALX04_RS03575 PF05670 NFACT protein RNA binding domain ALX04_RS03585 PF02645 Uncharacterised protein, DegV family COG1307 ALX04_RS03645 PF00324 Amino acid permease ALX04_RS03660 PF02652 L-lactate permease ALX04_RS03670 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ALX04_RS03675 PF08240 Alcohol dehydrogenase GroES-like domain ALX04_RS03675 PF16912 Glucose dehydrogenase C-terminus ALX04_RS03680 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ALX04_RS03685 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ALX04_RS03690 PF13673 Acetyltransferase (GNAT) domain ALX04_RS03695 PF01047 MarR family ALX04_RS03700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALX04_RS03700 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALX04_RS03730 PF01625 Peptide methionine sulfoxide reductase ALX04_RS03735 PF01641 SelR domain ALX04_RS03740 PF02833 DHHA2 domain ALX04_RS03740 PF01368 DHH family ALX04_RS03745 PF03466 LysR substrate binding domain ALX04_RS03745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALX04_RS03750 PF03989 DNA gyrase C-terminal domain, beta-propeller ALX04_RS03750 PF00521 DNA gyrase/topoisomerase IV, subunit A ALX04_RS03755 PF00204 DNA gyrase B ALX04_RS03755 PF00986 DNA gyrase B subunit, carboxyl terminus ALX04_RS03755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALX04_RS03755 PF01751 Toprim domain ALX04_RS03760 PF02660 Glycerol-3-phosphate acyltransferase ALX04_RS03765 PF01263 Aldose 1-epimerase ALX04_RS03770 PF00004 ATPase family associated with various cellular activities (AAA) ALX04_RS03770 PF07724 AAA domain (Cdc48 subfamily) ALX04_RS03770 PF10431 C-terminal, D2-small domain, of ClpB protein ALX04_RS03775 PF00227 Proteasome subunit ALX04_RS03780 PF00589 Phage integrase family ALX04_RS03780 PF02899 Phage integrase, N-terminal SAM-like domain ALX04_RS03785 PF01134 Glucose inhibited division protein A ALX04_RS03790 PF01396 Topoisomerase DNA binding C4 zinc finger ALX04_RS03790 PF01131 DNA topoisomerase ALX04_RS03790 PF01751 Toprim domain ALX04_RS03795 PF18255 DNA processing protein A sterile alpha motif domain ALX04_RS03795 PF02481 DNA recombination-mediator protein A ALX04_RS03800 PF01351 Ribonuclease HII ALX04_RS03805 PF01926 50S ribosome-binding GTPase ALX04_RS03815 PF01717 Cobalamin-independent synthase, Catalytic domain ALX04_RS03820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALX04_RS03820 PF03466 LysR substrate binding domain ALX04_RS03835 PF07690 Major Facilitator Superfamily ALX04_RS03840 PF17820 PDZ domain ALX04_RS03840 PF01471 Putative peptidoglycan binding domain ALX04_RS03840 PF03572 Peptidase family S41 ALX04_RS03845 PF06855 YozE SAM-like fold ALX04_RS03850 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) ALX04_RS03855 PF13472 GDSL-like Lipase/Acylhydrolase family ALX04_RS03860 PF02645 Uncharacterised protein, DegV family COG1307 ALX04_RS03865 PF00186 Dihydrofolate reductase ALX04_RS03870 PF00303 Thymidylate synthase ALX04_RS03875 PF00005 ABC transporter ALX04_RS03875 PF16326 ABC transporter C-terminal domain ALX04_RS03875 PF12848 ABC transporter ALX04_RS03885 PF01743 Poly A polymerase head domain ALX04_RS03885 PF12627 Probable RNA and SrmB- binding site of polymerase A ALX04_RS03885 PF13735 tRNA nucleotidyltransferase domain 2 putative ALX04_RS03890 PF05173 Dihydrodipicolinate reductase, C-terminus ALX04_RS03890 PF01113 Dihydrodipicolinate reductase, N-terminus ALX04_RS03905 PF00216 Bacterial DNA-binding protein ALX04_RS03915 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ALX04_RS03915 PF01926 50S ribosome-binding GTPase ALX04_RS03920 PF00575 S1 RNA binding domain ALX04_RS03925 PF02224 Cytidylate kinase ALX04_RS03935 PF00270 DEAD/DEAH box helicase ALX04_RS03935 PF00271 Helicase conserved C-terminal domain ALX04_RS03950 PF12822 ECF transporter, substrate-specific component ALX04_RS03955 PF00849 RNA pseudouridylate synthase ALX04_RS03955 PF01479 S4 domain ALX04_RS03960 PF04079 Segregation and condensation complex subunit ScpB ALX04_RS03965 PF02616 Segregation and condensation protein ScpA ALX04_RS03970 PF00583 Acetyltransferase (GNAT) family ALX04_RS03975 PF00589 Phage integrase family ALX04_RS03975 PF02899 Phage integrase, N-terminal SAM-like domain ALX04_RS03980 PF13509 S1 domain ALX04_RS03980 PF17783 CvfB-like winged helix domain ALX04_RS03985 PF04284 Protein of unknown function (DUF441) ALX04_RS03990 PF00224 Pyruvate kinase, barrel domain ALX04_RS03990 PF02887 Pyruvate kinase, alpha/beta domain ALX04_RS03990 PF00391 PEP-utilising enzyme, mobile domain ALX04_RS03995 PF00365 Phosphofructokinase ALX04_RS04000 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ALX04_RS04000 PF14579 Helix-hairpin-helix motif ALX04_RS04000 PF01336 OB-fold nucleic acid binding domain ALX04_RS04000 PF02811 PHP domain ALX04_RS04000 PF07733 Bacterial DNA polymerase III alpha NTPase domain ALX04_RS04010 PF17871 AAA lid domain ALX04_RS04010 PF10431 C-terminal, D2-small domain, of ClpB protein ALX04_RS04010 PF07724 AAA domain (Cdc48 subfamily) ALX04_RS04010 PF02861 Clp amino terminal domain, pathogenicity island component ALX04_RS04010 PF00004 ATPase family associated with various cellular activities (AAA) ALX04_RS04015 PF07687 Peptidase dimerisation domain ALX04_RS04015 PF01546 Peptidase family M20/M25/M40 ALX04_RS04020 PF01784 NIF3 (NGG1p interacting factor 3) ALX04_RS04025 PF04816 tRNA (adenine(22)-N(1))-methyltransferase ALX04_RS04035 PF01061 ABC-2 type transporter ALX04_RS04040 PF13732 Domain of unknown function (DUF4162) ALX04_RS04040 PF00005 ABC transporter ALX04_RS04050 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ALX04_RS04050 PF00391 PEP-utilising enzyme, mobile domain ALX04_RS04050 PF02896 PEP-utilising enzyme, TIM barrel domain ALX04_RS04060 PF01047 MarR family ALX04_RS04080 PF00403 Heavy-metal-associated domain ALX04_RS04085 PF00113 Enolase, C-terminal TIM barrel domain ALX04_RS04085 PF03952 Enolase, N-terminal domain ALX04_RS04090 PF07690 Major Facilitator Superfamily ALX04_RS04100 PF07687 Peptidase dimerisation domain ALX04_RS04100 PF01546 Peptidase family M20/M25/M40 ALX04_RS04110 PF00455 DeoR C terminal sensor domain ALX04_RS04110 PF08220 DeoR-like helix-turn-helix domain ALX04_RS04120 PF03960 ArsC family ALX04_RS04165 PF13276 HTH-like domain ALX04_RS04165 PF00665 Integrase core domain ALX04_RS04165 PF13333 Integrase core domain ALX04_RS04190 PF13419 Haloacid dehalogenase-like hydrolase ALX04_RS04195 PF00132 Bacterial transferase hexapeptide (six repeats) ALX04_RS04195 PF12464 Maltose acetyltransferase ALX04_RS04195 PF14602 Hexapeptide repeat of succinyl-transferase ALX04_RS04200 PF01418 Helix-turn-helix domain, rpiR family ALX04_RS04200 PF01380 SIS domain ALX04_RS04220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALX04_RS04220 PF03466 LysR substrate binding domain ALX04_RS04225 PF00107 Zinc-binding dehydrogenase ALX04_RS04225 PF08240 Alcohol dehydrogenase GroES-like domain ALX04_RS04235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALX04_RS04235 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALX04_RS04240 PF00072 Response regulator receiver domain ALX04_RS04240 PF00196 Bacterial regulatory proteins, luxR family ALX04_RS04245 PF07730 Histidine kinase ALX04_RS04255 PF00005 ABC transporter ALX04_RS04265 PF00117 Glutamine amidotransferase class-I ALX04_RS04265 PF00958 GMP synthase C terminal domain ALX04_RS04265 PF03352 Methyladenine glycosylase ALX04_RS04265 PF13673 Acetyltransferase (GNAT) domain ALX04_RS04265 PF13302 Acetyltransferase (GNAT) domain ALX04_RS04295 PF00005 ABC transporter ALX04_RS04315 PF00005 ABC transporter ALX04_RS04320 PF00392 Bacterial regulatory proteins, gntR family ALX04_RS04330 PF04542 Sigma-70 region 2 ALX04_RS04330 PF04545 Sigma-70, region 4 ALX04_RS04330 PF03979 Sigma-70 factor, region 1.1 ALX04_RS04330 PF04539 Sigma-70 region 3 ALX04_RS04330 PF00140 Sigma-70 factor, region 1.2 ALX04_RS04335 PF10410 DnaB-helicase binding domain of primase ALX04_RS04335 PF01807 CHC2 zinc finger ALX04_RS04335 PF08275 DNA primase catalytic core, N-terminal domain ALX04_RS04340 PF02092 Glycyl-tRNA synthetase beta subunit ALX04_RS04345 PF02091 Glycyl-tRNA synthetase alpha subunit ALX04_RS04350 PF02565 Recombination protein O C terminal ALX04_RS04350 PF11967 Recombination protein O N terminal ALX04_RS04355 PF01926 50S ribosome-binding GTPase ALX04_RS04355 PF07650 KH domain ALX04_RS04360 PF01219 Prokaryotic diacylglycerol kinase ALX04_RS04365 PF02130 Uncharacterized protein family UPF0054 ALX04_RS04370 PF02562 PhoH-like protein ALX04_RS04375 PF09424 Yqey-like protein ALX04_RS04380 PF01165 Ribosomal protein S21 ALX04_RS04385 PF03618 Kinase/pyrophosphorylase ALX04_RS04395 PF01261 Xylose isomerase-like TIM barrel ALX04_RS04400 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ALX04_RS04405 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ALX04_RS04405 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ALX04_RS04410 PF01625 Peptide methionine sulfoxide reductase ALX04_RS04415 PF01336 OB-fold nucleic acid binding domain ALX04_RS04415 PF00152 tRNA synthetases class II (D, K and N) ALX04_RS04415 PF02938 GAD domain ALX04_RS04420 PF03129 Anticodon binding domain ALX04_RS04420 PF13393 Histidyl-tRNA synthetase ALX04_RS04425 PF08239 Bacterial SH3 domain ALX04_RS04425 PF01520 N-acetylmuramoyl-L-alanine amidase ALX04_RS04430 PF03881 Fructosamine kinase ALX04_RS04435 PF13419 Haloacid dehalogenase-like hydrolase ALX04_RS04440 PF02580 D-Tyr-tRNA(Tyr) deacylase ALX04_RS04445 PF04607 Region found in RelA / SpoT proteins ALX04_RS04445 PF02824 TGS domain ALX04_RS04445 PF13291 ACT domain ALX04_RS04455 PF04452 RNA methyltransferase ALX04_RS04465 PF02245 Methylpurine-DNA glycosylase (MPG) ALX04_RS04480 PF03144 Elongation factor Tu domain 2 ALX04_RS04480 PF00009 Elongation factor Tu GTP binding domain ALX04_RS04480 PF00679 Elongation factor G C-terminus ALX04_RS04480 PF06421 GTP-binding protein LepA C-terminus ALX04_RS04485 PF04914 DltD protein ALX04_RS04490 PF00550 Phosphopantetheine attachment site ALX04_RS04495 PF03062 MBOAT, membrane-bound O-acyltransferase family ALX04_RS04500 PF13193 AMP-binding enzyme C-terminal domain ALX04_RS04500 PF00501 AMP-binding enzyme ALX04_RS04510 PF11954 Domain of unknown function (DUF3471) ALX04_RS04510 PF00144 Beta-lactamase ALX04_RS04515 PF01556 DnaJ C terminal domain ALX04_RS04515 PF00684 DnaJ central domain ALX04_RS04515 PF00226 DnaJ domain ALX04_RS04520 PF00012 Hsp70 protein ALX04_RS04525 PF01025 GrpE ALX04_RS04530 PF01628 HrcA protein C terminal domain ALX04_RS04530 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ALX04_RS04535 PF03306 Alpha-acetolactate decarboxylase ALX04_RS04540 PF06574 FAD synthetase ALX04_RS04540 PF01687 Riboflavin kinase ALX04_RS04545 PF01509 TruB family pseudouridylate synthase (N terminal domain) ALX04_RS04545 PF16198 tRNA pseudouridylate synthase B C-terminal domain ALX04_RS04550 PF01202 Shikimate kinase ALX04_RS04555 PF01842 ACT domain ALX04_RS04555 PF02153 Prephenate dehydrogenase ALX04_RS04560 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ALX04_RS04570 PF01264 Chorismate synthase ALX04_RS04575 PF07690 Major Facilitator Superfamily ALX04_RS04580 PF02033 Ribosome-binding factor A ALX04_RS04585 PF00009 Elongation factor Tu GTP binding domain ALX04_RS04585 PF11987 Translation-initiation factor 2 ALX04_RS04585 PF04760 Translation initiation factor IF-2, N-terminal region ALX04_RS04590 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family ALX04_RS04595 PF04296 Protein of unknown function (DUF448) ALX04_RS04600 PF08529 NusA N-terminal domain ALX04_RS04600 PF00575 S1 RNA binding domain ALX04_RS04600 PF13184 NusA-like KH domain ALX04_RS04605 PF02576 RimP N-terminal domain ALX04_RS04605 PF17384 RimP C-terminal SH3 domain ALX04_RS04610 PF07733 Bacterial DNA polymerase III alpha NTPase domain ALX04_RS04610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ALX04_RS04610 PF14579 Helix-hairpin-helix motif ALX04_RS04610 PF14480 DNA polymerase III polC-type N-terminus I ALX04_RS04610 PF11490 DNA polymerase III polC-type N-terminus II ALX04_RS04610 PF02811 PHP domain ALX04_RS04610 PF00929 Exonuclease ALX04_RS04615 PF03129 Anticodon binding domain ALX04_RS04615 PF04073 Aminoacyl-tRNA editing domain ALX04_RS04615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ALX04_RS04620 PF02163 Peptidase family M50 ALX04_RS04620 PF17820 PDZ domain ALX04_RS04630 PF01255 Putative undecaprenyl diphosphate synthase ALX04_RS04635 PF01765 Ribosome recycling factor ALX04_RS04640 PF00696 Amino acid kinase family ALX04_RS04645 PF00889 Elongation factor TS ALX04_RS04650 PF00318 Ribosomal protein S2 ALX04_RS04665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALX04_RS04665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALX04_RS04670 PF01541 GIY-YIG catalytic domain ALX04_RS04675 PF05175 Methyltransferase small domain ALX04_RS04680 PF01553 Acyltransferase ALX04_RS04685 PF03672 Uncharacterised protein family (UPF0154) ALX04_RS04690 PF05979 Bacterial protein of unknown function (DUF896) ALX04_RS04695 PF00717 Peptidase S24-like ALX04_RS04695 PF01726 LexA DNA binding domain ALX04_RS04710 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal ALX04_RS04710 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal ALX04_RS04725 PF00535 Glycosyl transferase family 2 ALX04_RS04735 PF03816 Cell envelope-related transcriptional attenuator domain ALX04_RS04740 PF00005 ABC transporter ALX04_RS04750 PF01098 Cell cycle protein ALX04_RS04980 PF01381 Helix-turn-helix ALX04_RS05045 PF01906 Putative heavy-metal-binding ALX04_RS05060 PF00156 Phosphoribosyl transferase domain ALX04_RS05065 PF01368 DHH family ALX04_RS05065 PF17768 RecJ OB domain ALX04_RS05065 PF02272 DHHA1 domain ALX04_RS05065 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ALX04_RS05070 PF06305 Lipopolysaccharide assembly protein A domain ALX04_RS05075 PF00106 short chain dehydrogenase ALX04_RS05080 PF12706 Beta-lactamase superfamily domain ALX04_RS05080 PF00753 Metallo-beta-lactamase superfamily ALX04_RS05090 PF01018 GTP1/OBG ALX04_RS05090 PF01926 50S ribosome-binding GTPase ALX04_RS05090 PF09269 Domain of unknown function (DUF1967) ALX04_RS05095 PF08220 DeoR-like helix-turn-helix domain ALX04_RS05095 PF00455 DeoR C terminal sensor domain ALX04_RS05100 PF00294 pfkB family carbohydrate kinase ALX04_RS05105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ALX04_RS05105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ALX04_RS05110 PF00149 Calcineurin-like phosphoesterase ALX04_RS05120 PF00535 Glycosyl transferase family 2 ALX04_RS05135 PF00534 Glycosyl transferases group 1 ALX04_RS05140 PF02397 Bacterial sugar transferase ALX04_RS05145 PF01370 NAD dependent epimerase/dehydratase family ALX04_RS05155 PF13614 AAA domain ALX04_RS05165 PF01541 GIY-YIG catalytic domain ALX04_RS05165 PF02151 UvrB/uvrC motif ALX04_RS05165 PF08459 UvrC Helix-hairpin-helix N-terminal ALX04_RS05170 PF00005 ABC transporter ALX04_RS05175 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS05195 PF01926 50S ribosome-binding GTPase ALX04_RS05200 PF07724 AAA domain (Cdc48 subfamily) ALX04_RS05200 PF06689 ClpX C4-type zinc finger ALX04_RS05200 PF10431 C-terminal, D2-small domain, of ClpB protein ALX04_RS05205 PF05697 Bacterial trigger factor protein (TF) ALX04_RS05205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ALX04_RS05205 PF05698 Bacterial trigger factor protein (TF) C-terminus ALX04_RS05210 PF03143 Elongation factor Tu C-terminal domain ALX04_RS05210 PF03144 Elongation factor Tu domain 2 ALX04_RS05210 PF00009 Elongation factor Tu GTP binding domain ALX04_RS05220 PF17770 Ribonuclease J C-terminal domain ALX04_RS05220 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ALX04_RS05220 PF00753 Metallo-beta-lactamase superfamily ALX04_RS05225 PF00701 Dihydrodipicolinate synthetase family ALX04_RS05235 PF00312 Ribosomal protein S15 ALX04_RS05240 PF01649 Ribosomal protein S20 ALX04_RS05245 PF06144 DNA polymerase III, delta subunit ALX04_RS05250 PF13567 Domain of unknown function (DUF4131) ALX04_RS05250 PF03772 Competence protein ALX04_RS05250 PF00753 Metallo-beta-lactamase superfamily ALX04_RS05255 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ALX04_RS05260 PF10531 SLBB domain ALX04_RS05265 PF13180 PDZ domain ALX04_RS05265 PF05362 Lon protease (S16) C-terminal proteolytic domain ALX04_RS05270 PF01467 Cytidylyltransferase-like ALX04_RS05280 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) ALX04_RS05285 PF02785 Biotin carboxylase C-terminal domain ALX04_RS05285 PF00289 Biotin carboxylase, N-terminal domain ALX04_RS05285 PF00364 Biotin-requiring enzyme ALX04_RS05285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALX04_RS05285 PF00682 HMGL-like ALX04_RS05285 PF02436 Conserved carboxylase domain ALX04_RS05290 PF01098 Cell cycle protein ALX04_RS05310 PF00009 Elongation factor Tu GTP binding domain ALX04_RS05310 PF03144 Elongation factor Tu domain 2 ALX04_RS05310 PF00679 Elongation factor G C-terminus ALX04_RS05310 PF14492 Elongation Factor G, domain II ALX04_RS05315 PF00459 Inositol monophosphatase family ALX04_RS05320 PF05256 Uncharacterised protein family (UPF0223) ALX04_RS05325 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ALX04_RS05325 PF00056 lactate/malate dehydrogenase, NAD binding domain ALX04_RS05335 PF02817 e3 binding domain ALX04_RS05335 PF00364 Biotin-requiring enzyme ALX04_RS05335 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ALX04_RS05340 PF02780 Transketolase, C-terminal domain ALX04_RS05340 PF02779 Transketolase, pyrimidine binding domain ALX04_RS05345 PF00676 Dehydrogenase E1 component ALX04_RS05350 PF01327 Polypeptide deformylase ALX04_RS05360 PF07288 Protein of unknown function (DUF1447) ALX04_RS05365 PF00753 Metallo-beta-lactamase superfamily ALX04_RS05365 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ALX04_RS05365 PF17770 Ribonuclease J C-terminal domain ALX04_RS05370 PF00781 Diacylglycerol kinase catalytic domain ALX04_RS05380 PF01476 LysM domain ALX04_RS05380 PF06725 3D domain ALX04_RS05385 PF14572 Phosphoribosyl synthetase-associated domain ALX04_RS05385 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ALX04_RS05390 PF14490 Helix-hairpin-helix containing domain ALX04_RS05390 PF13538 UvrD-like helicase C-terminal domain ALX04_RS05390 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain ALX04_RS05400 PF00300 Histidine phosphatase superfamily (branch 1) ALX04_RS05420 PF02080 TrkA-C domain ALX04_RS05420 PF02254 TrkA-N domain ALX04_RS05425 PF02386 Cation transport protein ALX04_RS05440 PF00266 Aminotransferase class-V ALX04_RS05445 PF01048 Phosphorylase superfamily ALX04_RS05455 PF00293 NUDIX domain ALX04_RS05460 PF01678 Diaminopimelate epimerase ALX04_RS05470 PF00072 Response regulator receiver domain ALX04_RS05470 PF04397 LytTr DNA-binding domain ALX04_RS05480 PF00005 ABC transporter ALX04_RS05485 PF00133 tRNA synthetases class I (I, L, M and V) ALX04_RS05485 PF08264 Anticodon-binding domain of tRNA ALX04_RS05485 PF06827 Zinc finger found in FPG and IleRS ALX04_RS05490 PF05103 DivIVA protein ALX04_RS05500 PF02325 YGGT family ALX04_RS05505 PF04472 Cell division protein SepF ALX04_RS05510 PF12327 FtsZ family, C-terminal domain ALX04_RS05510 PF00091 Tubulin/FtsZ family, GTPase domain ALX04_RS05515 PF02491 SHS2 domain inserted in FTSA ALX04_RS05515 PF11983 Membrane-attachment and polymerisation-promoting switch ALX04_RS05520 PF08478 POTRA domain, FtsQ-type ALX04_RS05520 PF03799 Cell division protein FtsQ ALX04_RS05525 PF03033 Glycosyltransferase family 28 N-terminal domain ALX04_RS05525 PF04101 Glycosyltransferase family 28 C-terminal domain ALX04_RS05530 PF02875 Mur ligase family, glutamate ligase domain ALX04_RS05530 PF08245 Mur ligase middle domain ALX04_RS05535 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ALX04_RS05535 PF00953 Glycosyl transferase family 4 ALX04_RS05540 PF00905 Penicillin binding protein transpeptidase domain ALX04_RS05540 PF03717 Penicillin-binding Protein dimerisation domain ALX04_RS05540 PF03793 PASTA domain ALX04_RS05550 PF01795 MraW methylase family ALX04_RS05555 PF02381 MraZ protein, putative antitoxin-like ALX04_RS05575 PF01580 FtsK/SpoIIIE family ALX04_RS05575 PF09397 Ftsk gamma domain ALX04_RS05575 PF17854 FtsK alpha domain ALX04_RS05580 PF00588 SpoU rRNA Methylase family ALX04_RS05590 PF05525 Branched-chain amino acid transport protein ALX04_RS05605 PF00253 Ribosomal protein S14p/S29e ALX04_RS05610 PF01594 AI-2E family transporter ALX04_RS05620 PF10282 Lactonase, 7-bladed beta-propeller ALX04_RS05625 PF03932 CutC family ALX04_RS05630 PF00849 RNA pseudouridylate synthase ALX04_RS05635 PF01513 ATP-NAD kinase ALX04_RS05640 PF04607 Region found in RelA / SpoT proteins ALX04_RS05650 PF08439 Oligopeptidase F ALX04_RS05650 PF01432 Peptidase family M3 ALX04_RS05660 PF05389 Negative regulator of genetic competence (MecA) ALX04_RS05665 PF03960 ArsC family ALX04_RS05670 PF12706 Beta-lactamase superfamily domain ALX04_RS05810 PF00575 S1 RNA binding domain ALX04_RS05815 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ALX04_RS05820 PF09335 SNARE associated Golgi protein ALX04_RS05830 PF13344 Haloacid dehalogenase-like hydrolase ALX04_RS05835 PF06265 Protein of unknown function (DUF1027) ALX04_RS05840 PF02872 5'-nucleotidase, C-terminal domain ALX04_RS05855 PF00324 Amino acid permease ALX04_RS05860 PF00871 Acetokinase family ALX04_RS05865 PF02384 N-6 DNA Methylase ALX04_RS05895 PF00437 Type II/IV secretion system protein ALX04_RS05900 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ALX04_RS05900 PF00294 pfkB family carbohydrate kinase ALX04_RS05905 PF01709 Transcriptional regulator ALX04_RS05920 PF00356 Bacterial regulatory proteins, lacI family ALX04_RS05925 PF00557 Metallopeptidase family M24 ALX04_RS05925 PF01321 Creatinase/Prolidase N-terminal domain ALX04_RS05930 PF13411 MerR HTH family regulatory protein ALX04_RS05945 PF00924 Mechanosensitive ion channel ALX04_RS05950 PF01546 Peptidase family M20/M25/M40 ALX04_RS05950 PF07687 Peptidase dimerisation domain ALX04_RS05955 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal ALX04_RS05955 PF00132 Bacterial transferase hexapeptide (six repeats) ALX04_RS05955 PF14602 Hexapeptide repeat of succinyl-transferase ALX04_RS05970 PF01725 Ham1 family ALX04_RS05975 PF01177 Asp/Glu/Hydantoin racemase ALX04_RS05980 PF10702 Protein of unknown function (DUF2507) ALX04_RS05985 PF00085 Thioredoxin ALX04_RS05990 PF01713 Smr domain ALX04_RS05990 PF00488 MutS domain V ALX04_RS06000 PF06949 Protein of unknown function (DUF1292) ALX04_RS06005 PF03652 Holliday junction resolvase ALX04_RS06010 PF06135 IreB regulatory phosphoprotein ALX04_RS06015 PF01411 tRNA synthetases class II (A) ALX04_RS06015 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ALX04_RS06015 PF02272 DHHA1 domain ALX04_RS06020 PF00271 Helicase conserved C-terminal domain ALX04_RS06020 PF00270 DEAD/DEAH box helicase ALX04_RS06025 PF01368 DHH family ALX04_RS06025 PF02272 DHHA1 domain ALX04_RS06030 PF11799 impB/mucB/samB family C-terminal domain ALX04_RS06030 PF00817 impB/mucB/samB family ALX04_RS06035 PF02699 Preprotein translocase subunit ALX04_RS06040 PF01702 Queuine tRNA-ribosyltransferase ALX04_RS06045 PF02547 Queuosine biosynthesis protein ALX04_RS06050 PF05491 RuvB C-terminal winged helix domain ALX04_RS06050 PF17864 RuvB AAA lid domain ALX04_RS06050 PF05496 Holliday junction DNA helicase RuvB P-loop domain ALX04_RS06055 PF01330 RuvA N terminal domain ALX04_RS06055 PF07499 RuvA, C-terminal domain ALX04_RS06085 PF08676 MutL C terminal dimerisation domain ALX04_RS06085 PF01119 DNA mismatch repair protein, C-terminal domain ALX04_RS06090 PF00488 MutS domain V ALX04_RS06090 PF05190 MutS family domain IV ALX04_RS06090 PF05192 MutS domain III ALX04_RS06090 PF01624 MutS domain I ALX04_RS06090 PF05188 MutS domain II ALX04_RS06095 PF13277 YmdB-like protein ALX04_RS06100 PF12072 Domain of unknown function (DUF3552) ALX04_RS06100 PF00013 KH domain ALX04_RS06100 PF01966 HD domain ALX04_RS06105 PF00154 recA bacterial DNA recombination protein ALX04_RS06110 PF00994 Probable molybdopterin binding domain ALX04_RS06110 PF18146 Damage-inducible protein CinA KH domain ALX04_RS06110 PF02464 Competence-damaged protein ALX04_RS06115 PF01066 CDP-alcohol phosphatidyltransferase ALX04_RS06120 PF13464 Domain of unknown function (DUF4115) ALX04_RS06125 PF00675 Insulinase (Peptidase family M16) ALX04_RS06125 PF05193 Peptidase M16 inactive domain ALX04_RS06130 PF05193 Peptidase M16 inactive domain ALX04_RS06135 PF00696 Amino acid kinase family ALX04_RS06135 PF13840 ACT domain ALX04_RS06150 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALX04_RS06155 PF00005 ABC transporter ALX04_RS06160 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS06165 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ALX04_RS06170 PF03775 Septum formation inhibitor MinC, C-terminal domain ALX04_RS06180 PF04085 rod shape-determining protein MreC ALX04_RS06190 PF04002 RadC-like JAB domain ALX04_RS06195 PF02875 Mur ligase family, glutamate ligase domain ALX04_RS06195 PF08245 Mur ligase middle domain ALX04_RS06200 PF10458 Valyl tRNA synthetase tRNA binding arm ALX04_RS06200 PF00133 tRNA synthetases class I (I, L, M and V) ALX04_RS06200 PF08264 Anticodon-binding domain of tRNA ALX04_RS06205 PF08534 Redoxin ALX04_RS06210 PF02655 ATP-grasp domain ALX04_RS06210 PF18419 ATP-grasp-like domain ALX04_RS06210 PF04262 Glutamate-cysteine ligase ALX04_RS06215 PF02926 THUMP domain ALX04_RS06215 PF02568 Thiamine biosynthesis protein (ThiI) ALX04_RS06220 PF00266 Aminotransferase class-V ALX04_RS06230 PF06160 Septation ring formation regulator, EzrA ALX04_RS06235 PF13185 GAF domain ALX04_RS06240 PF01479 S4 domain ALX04_RS06240 PF00163 Ribosomal protein S4/S9 N-terminal domain ALX04_RS06245 PF06335 Protein of unknown function (DUF1054) ALX04_RS06260 PF01022 Bacterial regulatory protein, arsR family ALX04_RS06265 PF00128 Alpha amylase, catalytic domain ALX04_RS06275 PF03613 PTS system mannose/fructose/sorbose family IID component ALX04_RS06280 PF03609 PTS system sorbose-specific iic component ALX04_RS06285 PF03830 PTS system sorbose subfamily IIB component ALX04_RS06290 PF00356 Bacterial regulatory proteins, lacI family ALX04_RS06295 PF18419 ATP-grasp-like domain ALX04_RS06295 PF04262 Glutamate-cysteine ligase ALX04_RS06300 PF12002 MgsA AAA+ ATPase C terminal ALX04_RS06300 PF16193 AAA C-terminal domain ALX04_RS06300 PF05496 Holliday junction DNA helicase RuvB P-loop domain ALX04_RS06315 PF00582 Universal stress protein family ALX04_RS06335 PF01820 D-ala D-ala ligase N-terminus ALX04_RS06335 PF07478 D-ala D-ala ligase C-terminus ALX04_RS06340 PF08240 Alcohol dehydrogenase GroES-like domain ALX04_RS06340 PF00107 Zinc-binding dehydrogenase ALX04_RS06350 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ALX04_RS06350 PF00056 lactate/malate dehydrogenase, NAD binding domain ALX04_RS06355 PF03180 NLPA lipoprotein ALX04_RS06360 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS06365 PF00005 ABC transporter ALX04_RS06365 PF09383 NIL domain ALX04_RS06370 PF01597 Glycine cleavage H-protein ALX04_RS06375 PF01098 Cell cycle protein ALX04_RS06385 PF01809 Putative membrane protein insertion efficiency factor ALX04_RS06400 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ALX04_RS06405 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ALX04_RS06405 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ALX04_RS06410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ALX04_RS06410 PF02874 ATP synthase alpha/beta family, beta-barrel domain ALX04_RS06415 PF00231 ATP synthase ALX04_RS06420 PF02874 ATP synthase alpha/beta family, beta-barrel domain ALX04_RS06420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ALX04_RS06420 PF00306 ATP synthase alpha/beta chain, C terminal domain ALX04_RS06425 PF00213 ATP synthase delta (OSCP) subunit ALX04_RS06430 PF00430 ATP synthase B/B' CF(0) ALX04_RS06435 PF00137 ATP synthase subunit C ALX04_RS06440 PF00119 ATP synthase A chain ALX04_RS06445 PF00860 Permease family ALX04_RS06460 PF00464 Serine hydroxymethyltransferase ALX04_RS06465 PF01300 Telomere recombination ALX04_RS06465 PF03481 Putative GTP-binding controlling metal-binding ALX04_RS06470 PF17827 PrmC N-terminal domain ALX04_RS06470 PF05175 Methyltransferase small domain ALX04_RS06475 PF00472 RF-1 domain ALX04_RS06475 PF03462 PCRF domain ALX04_RS06480 PF00265 Thymidine kinase ALX04_RS06485 PF08245 Mur ligase middle domain ALX04_RS06485 PF08353 Domain of unknown function (DUF1727) ALX04_RS06490 PF07685 CobB/CobQ-like glutamine amidotransferase domain ALX04_RS06495 PF01238 Phosphomannose isomerase type I ALX04_RS06500 PF00144 Beta-lactamase ALX04_RS06510 PF01063 Amino-transferase class IV ALX04_RS06525 PF00005 ABC transporter ALX04_RS06525 PF00664 ABC transporter transmembrane region ALX04_RS06530 PF00005 ABC transporter ALX04_RS06530 PF00664 ABC transporter transmembrane region ALX04_RS06625 PF01464 Transglycosylase SLT domain ALX04_RS06800 PF01381 Helix-turn-helix ALX04_RS06845 PF13614 AAA domain ALX04_RS06860 PF02899 Phage integrase, N-terminal SAM-like domain ALX04_RS06860 PF00589 Phage integrase family ALX04_RS06905 PF04860 Phage portal protein ALX04_RS06975 PF00589 Phage integrase family ALX04_RS06975 PF02899 Phage integrase, N-terminal SAM-like domain ALX04_RS07000 PF06458 MucBP domain ALX04_RS07055 PF00664 ABC transporter transmembrane region ALX04_RS07055 PF00005 ABC transporter ALX04_RS07065 PF02687 FtsX-like permease family ALX04_RS07065 PF12704 MacB-like periplasmic core domain ALX04_RS07065 PF00005 ABC transporter ALX04_RS07075 PF00342 Phosphoglucose isomerase ALX04_RS07080 PF06800 Sugar transport protein ALX04_RS07085 PF10672 S-adenosylmethionine-dependent methyltransferase ALX04_RS07085 PF17785 PUA-like domain ALX04_RS07090 PF00512 His Kinase A (phospho-acceptor) domain ALX04_RS07090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALX04_RS07090 PF00672 HAMP domain ALX04_RS07095 PF00486 Transcriptional regulatory protein, C terminal ALX04_RS07095 PF00072 Response regulator receiver domain ALX04_RS07100 PF05167 Uncharacterised ACR (DUF711) ALX04_RS07110 PF00892 EamA-like transporter family ALX04_RS07130 PF07690 Major Facilitator Superfamily ALX04_RS07150 PF00877 NlpC/P60 family ALX04_RS07155 PF01037 Lrp/AsnC ligand binding domain ALX04_RS07170 PF00990 Diguanylate cyclase, GGDEF domain ALX04_RS07175 PF12848 ABC transporter ALX04_RS07175 PF00005 ABC transporter ALX04_RS07190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ALX04_RS07200 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ALX04_RS07200 PF00367 phosphotransferase system, EIIB ALX04_RS07200 PF02378 Phosphotransferase system, EIIC ALX04_RS07205 PF02558 Ketopantoate reductase PanE/ApbA ALX04_RS07205 PF08546 Ketopantoate reductase PanE/ApbA C terminal ALX04_RS07210 PF02645 Uncharacterised protein, DegV family COG1307 ALX04_RS07215 PF03447 Homoserine dehydrogenase, NAD binding domain ALX04_RS07215 PF00742 Homoserine dehydrogenase ALX04_RS07220 PF01053 Cys/Met metabolism PLP-dependent enzyme ALX04_RS07225 PF04204 Homoserine O-succinyltransferase ALX04_RS07240 PF02653 Branched-chain amino acid transport system / permease component ALX04_RS07245 PF00005 ABC transporter ALX04_RS07250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALX04_RS07250 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALX04_RS07255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ALX04_RS07255 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ALX04_RS07260 PF03741 Integral membrane protein TerC family ALX04_RS07265 PF12464 Maltose acetyltransferase ALX04_RS07265 PF14602 Hexapeptide repeat of succinyl-transferase ALX04_RS07270 PF00155 Aminotransferase class I and II ALX04_RS07275 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ALX04_RS07280 PF01502 Phosphoribosyl-AMP cyclohydrolase ALX04_RS07285 PF00977 Histidine biosynthesis protein ALX04_RS07290 PF00977 Histidine biosynthesis protein ALX04_RS07295 PF00117 Glutamine amidotransferase class-I ALX04_RS07300 PF00475 Imidazoleglycerol-phosphate dehydratase ALX04_RS07305 PF00815 Histidinol dehydrogenase ALX04_RS07310 PF01634 ATP phosphoribosyltransferase ALX04_RS07315 PF13393 Histidyl-tRNA synthetase ALX04_RS07320 PF02811 PHP domain ALX04_RS07340 PF13411 MerR HTH family regulatory protein ALX04_RS07345 PF00106 short chain dehydrogenase ALX04_RS07355 PF02774 Semialdehyde dehydrogenase, dimerisation domain ALX04_RS07355 PF01118 Semialdehyde dehydrogenase, NAD binding domain ALX04_RS07370 PF06736 Protein of unknown function (DUF1211) ALX04_RS07390 PF00884 Sulfatase ALX04_RS07395 PF03009 Glycerophosphoryl diester phosphodiesterase family ALX04_RS07405 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALX04_RS07420 PF03976 Polyphosphate kinase 2 (PPK2) ALX04_RS07425 PF00881 Nitroreductase family ALX04_RS07430 PF01156 Inosine-uridine preferring nucleoside hydrolase ALX04_RS07435 PF00075 RNase H ALX04_RS07440 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ALX04_RS07445 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ALX04_RS07445 PF00356 Bacterial regulatory proteins, lacI family ALX04_RS07450 PF01418 Helix-turn-helix domain, rpiR family ALX04_RS07450 PF01380 SIS domain ALX04_RS07455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ALX04_RS07455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ALX04_RS07460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ALX04_RS07460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ALX04_RS07465 PF00999 Sodium/hydrogen exchanger family ALX04_RS07470 PF02779 Transketolase, pyrimidine binding domain ALX04_RS07470 PF02780 Transketolase, C-terminal domain ALX04_RS07470 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ALX04_RS07480 PF00857 Isochorismatase family ALX04_RS07490 PF00005 ABC transporter ALX04_RS07495 PF00392 Bacterial regulatory proteins, gntR family ALX04_RS07550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ALX04_RS07550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALX04_RS07550 PF00205 Thiamine pyrophosphate enzyme, central domain ALX04_RS07560 PF00326 Prolyl oligopeptidase family ALX04_RS07565 PF00085 Thioredoxin ALX04_RS07570 PF01053 Cys/Met metabolism PLP-dependent enzyme ALX04_RS07600 PF10437 Bacterial lipoate protein ligase C-terminus ALX04_RS07600 PF03099 Biotin/lipoate A/B protein ligase family ALX04_RS07605 PF13457 GW (Gly-Tryp) dipeptide domain ALX04_RS07605 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ALX04_RS07610 PF00582 Universal stress protein family ALX04_RS07615 PF00849 RNA pseudouridylate synthase ALX04_RS07615 PF01479 S4 domain ALX04_RS07630 PF13240 zinc-ribbon domain ALX04_RS07635 PF01381 Helix-turn-helix ALX04_RS07635 PF08671 Anti-repressor SinI ALX04_RS07645 PF00534 Glycosyl transferases group 1 ALX04_RS07650 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase ALX04_RS07650 PF09363 XFP C-terminal domain ALX04_RS07650 PF09364 XFP N-terminal domain ALX04_RS07655 PF00756 Putative esterase ALX04_RS07660 PF00392 Bacterial regulatory proteins, gntR family ALX04_RS07660 PF07702 UTRA domain ALX04_RS07665 PF04073 Aminoacyl-tRNA editing domain ALX04_RS07675 PF01966 HD domain ALX04_RS07705 PF01595 Cyclin M transmembrane N-terminal domain ALX04_RS07705 PF00571 CBS domain ALX04_RS07705 PF03471 Transporter associated domain ALX04_RS07710 PF07972 NrdI Flavodoxin like ALX04_RS07715 PF00999 Sodium/hydrogen exchanger family ALX04_RS07720 PF07690 Major Facilitator Superfamily ALX04_RS07725 PF07739 TipAS antibiotic-recognition domain ALX04_RS07725 PF13411 MerR HTH family regulatory protein ALX04_RS07730 PF08240 Alcohol dehydrogenase GroES-like domain ALX04_RS07730 PF00107 Zinc-binding dehydrogenase ALX04_RS07740 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ALX04_RS07740 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ALX04_RS07750 PF00392 Bacterial regulatory proteins, gntR family ALX04_RS07750 PF00155 Aminotransferase class I and II ALX04_RS07755 PF00155 Aminotransferase class I and II ALX04_RS07760 PF00701 Dihydrodipicolinate synthetase family ALX04_RS07775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALX04_RS07775 PF03466 LysR substrate binding domain ALX04_RS07780 PF13460 NAD(P)H-binding ALX04_RS07790 PF12705 PD-(D/E)XK nuclease superfamily ALX04_RS07790 PF00580 UvrD/REP helicase N-terminal domain ALX04_RS07790 PF13361 UvrD-like helicase C-terminal domain ALX04_RS07795 PF12705 PD-(D/E)XK nuclease superfamily ALX04_RS07805 PF00156 Phosphoribosyl transferase domain ALX04_RS07810 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ALX04_RS07815 PF01180 Dihydroorotate dehydrogenase ALX04_RS07820 PF02142 MGS-like domain ALX04_RS07820 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ALX04_RS07820 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALX04_RS07825 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ALX04_RS07825 PF00117 Glutamine amidotransferase class-I ALX04_RS07830 PF01979 Amidohydrolase family ALX04_RS07835 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ALX04_RS07835 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ALX04_RS07840 PF00156 Phosphoribosyl transferase domain ALX04_RS07845 PF17853 GGDEF-like domain ALX04_RS07845 PF07905 Purine catabolism regulatory protein-like family ALX04_RS07845 PF13556 PucR C-terminal helix-turn-helix domain ALX04_RS07850 PF00860 Permease family ALX04_RS07855 PF00860 Permease family ALX04_RS07875 PF00535 Glycosyl transferase family 2 ALX04_RS07885 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ALX04_RS07885 PF02843 Phosphoribosylglycinamide synthetase, C domain ALX04_RS07885 PF02844 Phosphoribosylglycinamide synthetase, N domain ALX04_RS07890 PF02142 MGS-like domain ALX04_RS07890 PF01808 AICARFT/IMPCHase bienzyme ALX04_RS07895 PF00551 Formyl transferase ALX04_RS07900 PF00586 AIR synthase related protein, N-terminal domain ALX04_RS07900 PF02769 AIR synthase related protein, C-terminal domain ALX04_RS07905 PF00156 Phosphoribosyl transferase domain ALX04_RS07905 PF13537 Glutamine amidotransferase domain ALX04_RS07910 PF00586 AIR synthase related protein, N-terminal domain ALX04_RS07910 PF02769 AIR synthase related protein, C-terminal domain ALX04_RS07910 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ALX04_RS07920 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ALX04_RS07925 PF01259 SAICAR synthetase ALX04_RS07930 PF02222 ATP-grasp domain ALX04_RS07930 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ALX04_RS07935 PF00731 AIR carboxylase ALX04_RS07940 PF00890 FAD binding domain ALX04_RS07940 PF03358 NADPH-dependent FMN reductase ALX04_RS07940 PF04205 FMN-binding domain ALX04_RS07945 PF03358 NADPH-dependent FMN reductase ALX04_RS07945 PF00890 FAD binding domain ALX04_RS07945 PF04205 FMN-binding domain ALX04_RS07950 PF03099 Biotin/lipoate A/B protein ligase family ALX04_RS07950 PF10437 Bacterial lipoate protein ligase C-terminus ALX04_RS07955 PF13350 Tyrosine phosphatase family ALX04_RS07970 PF00710 Asparaginase, N-terminal ALX04_RS07970 PF17763 Glutaminase/Asparaginase C-terminal domain ALX04_RS07975 PF00005 ABC transporter ALX04_RS07990 PF00392 Bacterial regulatory proteins, gntR family ALX04_RS07995 PF00005 ABC transporter ALX04_RS08005 PF00582 Universal stress protein family ALX04_RS08015 PF04138 GtrA-like protein ALX04_RS08035 PF00155 Aminotransferase class I and II ALX04_RS08060 PF02903 Alpha amylase, N-terminal ig-like domain ALX04_RS08060 PF00128 Alpha amylase, catalytic domain ALX04_RS08065 PF14821 Threonine synthase N terminus ALX04_RS08065 PF00291 Pyridoxal-phosphate dependent enzyme ALX04_RS08080 PF00132 Bacterial transferase hexapeptide (six repeats) ALX04_RS08080 PF12464 Maltose acetyltransferase ALX04_RS08085 PF00293 NUDIX domain ALX04_RS08120 PF02829 3H domain ALX04_RS08120 PF08279 HTH domain ALX04_RS08125 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain ALX04_RS08125 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ALX04_RS08125 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ALX04_RS08130 PF00440 Bacterial regulatory proteins, tetR family ALX04_RS08140 PF00005 ABC transporter ALX04_RS08145 PF00291 Pyridoxal-phosphate dependent enzyme ALX04_RS08150 PF00232 Glycosyl hydrolase family 1 ALX04_RS08155 PF00232 Glycosyl hydrolase family 1 ALX04_RS08160 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ALX04_RS08165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ALX04_RS08170 PF00392 Bacterial regulatory proteins, gntR family ALX04_RS08170 PF07702 UTRA domain ALX04_RS08175 PF00535 Glycosyl transferase family 2 ALX04_RS08180 PF00300 Histidine phosphatase superfamily (branch 1) ALX04_RS08195 PF08546 Ketopantoate reductase PanE/ApbA C terminal ALX04_RS08195 PF02558 Ketopantoate reductase PanE/ApbA ALX04_RS08200 PF00892 EamA-like transporter family ALX04_RS08205 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALX04_RS08220 PF00258 Flavodoxin ALX04_RS08240 PF01487 Type I 3-dehydroquinase ALX04_RS08245 PF13520 Amino acid permease ALX04_RS08255 PF00248 Aldo/keto reductase family ALX04_RS08260 PF00248 Aldo/keto reductase family ALX04_RS08290 PF07155 ECF-type riboflavin transporter, S component ALX04_RS08295 PF00579 tRNA synthetases class I (W and Y) ALX04_RS08295 PF01479 S4 domain ALX04_RS08310 PF13529 Peptidase_C39 like family ALX04_RS08335 PF04474 Protein of unknown function (DUF554) ALX04_RS08345 PF00375 Sodium:dicarboxylate symporter family ALX04_RS08355 PF02687 FtsX-like permease family ALX04_RS08360 PF00005 ABC transporter ALX04_RS08370 PF01156 Inosine-uridine preferring nucleoside hydrolase ALX04_RS08380 PF00999 Sodium/hydrogen exchanger family ALX04_RS08395 PF10415 Fumarase C C-terminus ALX04_RS08395 PF00206 Lyase ALX04_RS08400 PF07690 Major Facilitator Superfamily ALX04_RS08410 PF07690 Major Facilitator Superfamily ALX04_RS08420 PF13302 Acetyltransferase (GNAT) domain ALX04_RS08425 PF03601 Conserved hypothetical protein 698 ALX04_RS08430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALX04_RS08430 PF03466 LysR substrate binding domain ALX04_RS08435 PF13439 Glycosyltransferase Family 4 ALX04_RS08435 PF00534 Glycosyl transferases group 1 ALX04_RS08440 PF13439 Glycosyltransferase Family 4 ALX04_RS08455 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ALX04_RS08455 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ALX04_RS08475 PF13732 Domain of unknown function (DUF4162) ALX04_RS08475 PF00005 ABC transporter ALX04_RS08485 PF00106 short chain dehydrogenase ALX04_RS08500 PF13411 MerR HTH family regulatory protein ALX04_RS08505 PF07687 Peptidase dimerisation domain ALX04_RS08505 PF01546 Peptidase family M20/M25/M40 ALX04_RS08515 PF00005 ABC transporter ALX04_RS08520 PF00730 HhH-GPD superfamily base excision DNA repair protein ALX04_RS08520 PF00633 Helix-hairpin-helix motif ALX04_RS08525 PF12464 Maltose acetyltransferase ALX04_RS08525 PF14602 Hexapeptide repeat of succinyl-transferase ALX04_RS08530 PF10502 Signal peptidase, peptidase S26 ALX04_RS08535 PF10502 Signal peptidase, peptidase S26 ALX04_RS08545 PF00583 Acetyltransferase (GNAT) family ALX04_RS08575 PF13936 Helix-turn-helix domain ALX04_RS08580 PF03466 LysR substrate binding domain ALX04_RS08580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALX04_RS08590 PF08240 Alcohol dehydrogenase GroES-like domain ALX04_RS08590 PF00107 Zinc-binding dehydrogenase ALX04_RS08600 PF00248 Aldo/keto reductase family ALX04_RS08605 PF06736 Protein of unknown function (DUF1211) ALX04_RS08620 PF06800 Sugar transport protein ALX04_RS08630 PF00248 Aldo/keto reductase family ALX04_RS08635 PF03466 LysR substrate binding domain ALX04_RS08635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALX04_RS08655 PF00106 short chain dehydrogenase ALX04_RS08660 PF00248 Aldo/keto reductase family ALX04_RS08665 PF00248 Aldo/keto reductase family ALX04_RS08670 PF07690 Major Facilitator Superfamily ALX04_RS08685 PF01381 Helix-turn-helix ALX04_RS08695 PF00582 Universal stress protein family ALX04_RS08700 PF14602 Hexapeptide repeat of succinyl-transferase ALX04_RS08700 PF12464 Maltose acetyltransferase ALX04_RS08705 PF13419 Haloacid dehalogenase-like hydrolase ALX04_RS08720 PF00155 Aminotransferase class I and II ALX04_RS08730 PF00248 Aldo/keto reductase family ALX04_RS08735 PF00005 ABC transporter ALX04_RS08735 PF00664 ABC transporter transmembrane region ALX04_RS08740 PF00664 ABC transporter transmembrane region ALX04_RS08740 PF00005 ABC transporter ALX04_RS08745 PF07690 Major Facilitator Superfamily ALX04_RS08770 PF01022 Bacterial regulatory protein, arsR family ALX04_RS08780 PF01223 DNA/RNA non-specific endonuclease ALX04_RS08805 PF00005 ABC transporter ALX04_RS08805 PF12848 ABC transporter ALX04_RS08820 PF17755 UvrA DNA-binding domain ALX04_RS08820 PF00005 ABC transporter ALX04_RS08820 PF17760 UvrA interaction domain ALX04_RS08835 PF00561 alpha/beta hydrolase fold ALX04_RS08840 PF13520 Amino acid permease ALX04_RS08845 PF11700 Vacuole effluxer Atg22 like ALX04_RS08880 PF00990 Diguanylate cyclase, GGDEF domain ALX04_RS08885 PF00563 EAL domain ALX04_RS08885 PF12792 CSS motif domain associated with EAL ALX04_RS08895 PF13597 Anaerobic ribonucleoside-triphosphate reductase ALX04_RS08895 PF03477 ATP cone domain ALX04_RS08905 PF01327 Polypeptide deformylase ALX04_RS08910 PF02424 ApbE family ALX04_RS08915 PF01207 Dihydrouridine synthase (Dus) ALX04_RS08935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALX04_RS08935 PF03466 LysR substrate binding domain ALX04_RS08940 PF00939 Sodium:sulfate symporter transmembrane region ALX04_RS08945 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ALX04_RS09030 PF00480 ROK family ALX04_RS09035 PF00664 ABC transporter transmembrane region ALX04_RS09035 PF00005 ABC transporter ALX04_RS09045 PF00881 Nitroreductase family ALX04_RS09050 PF02378 Phosphotransferase system, EIIC ALX04_RS09050 PF00367 phosphotransferase system, EIIB ALX04_RS09050 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ALX04_RS09055 PF00005 ABC transporter ALX04_RS09060 PF02653 Branched-chain amino acid transport system / permease component ALX04_RS09090 PF01743 Poly A polymerase head domain ALX04_RS09090 PF01368 DHH family ALX04_RS09090 PF12627 Probable RNA and SrmB- binding site of polymerase A ALX04_RS09090 PF00571 CBS domain ALX04_RS09090 PF02272 DHHA1 domain ALX04_RS09095 PF00005 ABC transporter ALX04_RS09100 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALX04_RS09100 PF00005 ABC transporter ALX04_RS09105 PF02653 Branched-chain amino acid transport system / permease component ALX04_RS09105 PF11862 Domain of unknown function (DUF3382) ALX04_RS09110 PF02653 Branched-chain amino acid transport system / permease component ALX04_RS09115 PF13458 Periplasmic binding protein ALX04_RS09125 PF00413 Matrixin ALX04_RS09130 PF04138 GtrA-like protein ALX04_RS09140 PF01566 Natural resistance-associated macrophage protein ALX04_RS09160 PF01022 Bacterial regulatory protein, arsR family ALX04_RS09180 PF02687 FtsX-like permease family ALX04_RS09180 PF12704 MacB-like periplasmic core domain ALX04_RS09180 PF00005 ABC transporter ALX04_RS09220 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ALX04_RS09225 PF02378 Phosphotransferase system, EIIC ALX04_RS09230 PF00232 Glycosyl hydrolase family 1 ALX04_RS09240 PF13411 MerR HTH family regulatory protein ALX04_RS09245 PF06737 Transglycosylase-like domain ALX04_RS09265 PF01297 Zinc-uptake complex component A periplasmic ALX04_RS09280 PF00990 Diguanylate cyclase, GGDEF domain ALX04_RS09290 PF11798 IMS family HHH motif ALX04_RS09290 PF11799 impB/mucB/samB family C-terminal domain ALX04_RS09290 PF00817 impB/mucB/samB family ALX04_RS09295 PF03466 LysR substrate binding domain ALX04_RS09295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALX04_RS09305 PF00106 short chain dehydrogenase ALX04_RS09350 PF00664 ABC transporter transmembrane region ALX04_RS09350 PF00005 ABC transporter ALX04_RS09355 PF00664 ABC transporter transmembrane region ALX04_RS09355 PF00005 ABC transporter ALX04_RS09365 PF01546 Peptidase family M20/M25/M40 ALX04_RS09365 PF07687 Peptidase dimerisation domain ALX04_RS09385 PF13520 Amino acid permease ALX04_RS09410 PF00107 Zinc-binding dehydrogenase ALX04_RS09410 PF08240 Alcohol dehydrogenase GroES-like domain ALX04_RS09415 PF00403 Heavy-metal-associated domain ALX04_RS09475 PF00107 Zinc-binding dehydrogenase ALX04_RS09475 PF08240 Alcohol dehydrogenase GroES-like domain ALX04_RS09505 PF06458 MucBP domain ALX04_RS09515 PF13419 Haloacid dehalogenase-like hydrolase ALX04_RS09520 PF01638 HxlR-like helix-turn-helix ALX04_RS09525 PF07690 Major Facilitator Superfamily ALX04_RS09535 PF00733 Asparagine synthase ALX04_RS09535 PF13537 Glutamine amidotransferase domain ALX04_RS09540 PF00072 Response regulator receiver domain ALX04_RS09540 PF04397 LytTr DNA-binding domain ALX04_RS09555 PF00440 Bacterial regulatory proteins, tetR family ALX04_RS09555 PF08359 YsiA-like protein, C-terminal region ALX04_RS09565 PF00171 Aldehyde dehydrogenase family ALX04_RS09585 PF01638 HxlR-like helix-turn-helix ALX04_RS09590 PF00106 short chain dehydrogenase ALX04_RS09635 PF02899 Phage integrase, N-terminal SAM-like domain ALX04_RS09635 PF00589 Phage integrase family ALX04_RS09690 PF13936 Helix-turn-helix domain ALX04_RS09725 PF00665 Integrase core domain ALX04_RS09725 PF13276 HTH-like domain ALX04_RS09725 PF13333 Integrase core domain ALX04_RS09760 PF00753 Metallo-beta-lactamase superfamily ALX04_RS09770 PF01209 ubiE/COQ5 methyltransferase family ALX04_RS09775 PF00300 Histidine phosphatase superfamily (branch 1) ALX04_RS09780 PF01594 AI-2E family transporter ALX04_RS09785 PF00480 ROK family ALX04_RS09805 PF03793 PASTA domain ALX04_RS09805 PF00069 Protein kinase domain ALX04_RS09845 PF00583 Acetyltransferase (GNAT) family ALX04_RS09850 PF00768 D-alanyl-D-alanine carboxypeptidase ALX04_RS09850 PF07943 Penicillin-binding protein 5, C-terminal domain ALX04_RS09855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALX04_RS09855 PF00512 His Kinase A (phospho-acceptor) domain ALX04_RS09860 PF00072 Response regulator receiver domain ALX04_RS09860 PF00486 Transcriptional regulatory protein, C terminal ALX04_RS09875 PF00571 CBS domain ALX04_RS09875 PF00478 IMP dehydrogenase / GMP reductase domain ALX04_RS09885 PF01926 50S ribosome-binding GTPase ALX04_RS09885 PF06071 Protein of unknown function (DUF933) ALX04_RS09890 PF06107 Bacterial protein of unknown function (DUF951) ALX04_RS09895 PF17762 HTH domain found in ParB protein ALX04_RS09895 PF02195 ParB-like nuclease domain ALX04_RS09900 PF13614 AAA domain ALX04_RS09905 PF17762 HTH domain found in ParB protein ALX04_RS09905 PF02195 ParB-like nuclease domain ALX04_RS09910 PF02527 rRNA small subunit methyltransferase G ALX04_RS09915 PF01773 Na+ dependent nucleoside transporter N-terminus ALX04_RS09915 PF07662 Na+ dependent nucleoside transporter C-terminus ALX04_RS09930 PF03466 LysR substrate binding domain ALX04_RS09930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALX04_RS09935 PF00155 Aminotransferase class I and II ALX04_RS09940 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALX04_RS09945 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS09950 PF00005 ABC transporter ALX04_RS09955 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALX04_RS09980 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ALX04_RS09980 PF00367 phosphotransferase system, EIIB ALX04_RS09980 PF02378 Phosphotransferase system, EIIC ALX04_RS09985 PF00128 Alpha amylase, catalytic domain ALX04_RS09990 PF00356 Bacterial regulatory proteins, lacI family ALX04_RS10005 PF03649 Uncharacterised protein family (UPF0014) ALX04_RS10010 PF00005 ABC transporter ALX04_RS10015 PF05958 tRNA (Uracil-5-)-methyltransferase ALX04_RS10015 PF01938 TRAM domain ALX04_RS10035 PF00480 ROK family ALX04_RS10040 PF07748 Glycosyl hydrolases family 38 C-terminal domain ALX04_RS10040 PF01074 Glycosyl hydrolases family 38 N-terminal domain ALX04_RS10040 PF09261 Alpha mannosidase middle domain ALX04_RS10045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ALX04_RS10045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ALX04_RS10045 PF02378 Phosphotransferase system, EIIC ALX04_RS10050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ALX04_RS10055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ALX04_RS10055 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ALX04_RS10060 PF00874 PRD domain ALX04_RS10060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ALX04_RS10060 PF05043 Mga helix-turn-helix domain ALX04_RS10060 PF08279 HTH domain ALX04_RS10090 PF03358 NADPH-dependent FMN reductase ALX04_RS10090 PF00890 FAD binding domain ALX04_RS10090 PF04205 FMN-binding domain ALX04_RS10105 PF01475 Ferric uptake regulator family ALX04_RS10110 PF08951 Enterocin A Immunity ALX04_RS10130 PF03788 LrgA family ALX04_RS10135 PF04172 LrgB-like family ALX04_RS10140 PF02645 Uncharacterised protein, DegV family COG1307 ALX04_RS10150 PF04298 Putative neutral zinc metallopeptidase ALX04_RS10155 PF01593 Flavin containing amine oxidoreductase ALX04_RS10170 PF02595 Glycerate kinase family ALX04_RS10175 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALX04_RS10175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALX04_RS10185 PF10397 Adenylosuccinate lyase C-terminus ALX04_RS10185 PF00206 Lyase ALX04_RS10190 PF00709 Adenylosuccinate synthetase ALX04_RS10195 PF00478 IMP dehydrogenase / GMP reductase domain ALX04_RS10200 PF13350 Tyrosine phosphatase family ALX04_RS10205 PF13396 Phospholipase_D-nuclease N-terminal ALX04_RS10205 PF13091 PLD-like domain ALX04_RS10220 PF06736 Protein of unknown function (DUF1211) ALX04_RS10230 PF13936 Helix-turn-helix domain ALX04_RS10235 PF13520 Amino acid permease ALX04_RS10240 PF02705 K+ potassium transporter ALX04_RS10245 PF16916 Dimerisation domain of Zinc Transporter ALX04_RS10245 PF01545 Cation efflux family ALX04_RS10250 PF01594 AI-2E family transporter ALX04_RS10255 PF01717 Cobalamin-independent synthase, Catalytic domain ALX04_RS10260 PF00893 Small Multidrug Resistance protein ALX04_RS10265 PF00893 Small Multidrug Resistance protein ALX04_RS10270 PF03006 Haemolysin-III related ALX04_RS10275 PF01022 Bacterial regulatory protein, arsR family ALX04_RS10280 PF01545 Cation efflux family ALX04_RS10305 PF00809 Pterin binding enzyme ALX04_RS10310 PF01725 Ham1 family ALX04_RS10315 PF08245 Mur ligase middle domain ALX04_RS10315 PF02875 Mur ligase family, glutamate ligase domain ALX04_RS10320 PF01227 GTP cyclohydrolase I ALX04_RS10325 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ALX04_RS10345 PF01297 Zinc-uptake complex component A periplasmic ALX04_RS10350 PF07690 Major Facilitator Superfamily ALX04_RS10380 PF00144 Beta-lactamase ALX04_RS10385 PF02901 Pyruvate formate lyase-like ALX04_RS10385 PF01228 Glycine radical ALX04_RS10390 PF04055 Radical SAM superfamily ALX04_RS10400 PF01883 Iron-sulfur cluster assembly protein ALX04_RS10405 PF00248 Aldo/keto reductase family ALX04_RS10435 PF02028 BCCT, betaine/carnitine/choline family transporter ALX04_RS10440 PF00403 Heavy-metal-associated domain ALX04_RS10450 PF04237 YjbR ALX04_RS10460 PF13382 Adenine deaminase C-terminal domain ALX04_RS10460 PF01979 Amidohydrolase family ALX04_RS10465 PF01380 SIS domain ALX04_RS10475 PF03553 Na+/H+ antiporter family ALX04_RS10480 PF00324 Amino acid permease ALX04_RS10490 PF04608 Phosphatidylglycerophosphatase A ALX04_RS10505 PF03960 ArsC family ALX04_RS10510 PF04343 Protein of unknown function, DUF488 ALX04_RS10520 PF00730 HhH-GPD superfamily base excision DNA repair protein ALX04_RS10520 PF14815 NUDIX domain ALX04_RS10535 PF00011 Hsp20/alpha crystallin family ALX04_RS10560 PF00892 EamA-like transporter family ALX04_RS10575 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family ALX04_RS10585 PF03965 Penicillinase repressor ALX04_RS10600 PF07690 Major Facilitator Superfamily ALX04_RS10625 PF07690 Major Facilitator Superfamily ALX04_RS10625 PF00083 Sugar (and other) transporter ALX04_RS10655 PF00690 Cation transporter/ATPase, N-terminus ALX04_RS10655 PF00689 Cation transporting ATPase, C-terminus ALX04_RS10660 PF00149 Calcineurin-like phosphoesterase ALX04_RS10660 PF02872 5'-nucleotidase, C-terminal domain ALX04_RS10670 PF00248 Aldo/keto reductase family ALX04_RS10690 PF02673 Bacitracin resistance protein BacA ALX04_RS10695 PF01661 Macro domain ALX04_RS10730 PF12833 Helix-turn-helix domain ALX04_RS10755 PF00282 Pyridoxal-dependent decarboxylase conserved domain ALX04_RS10760 PF00877 NlpC/P60 family ALX04_RS10800 PF00440 Bacterial regulatory proteins, tetR family ALX04_RS10810 PF01209 ubiE/COQ5 methyltransferase family ALX04_RS10825 PF00403 Heavy-metal-associated domain ALX04_RS10830 PF00230 Major intrinsic protein ALX04_RS10835 PF00085 Thioredoxin ALX04_RS10840 PF02583 Metal-sensitive transcriptional repressor ALX04_RS10860 PF13545 Crp-like helix-turn-helix domain ALX04_RS10860 PF00027 Cyclic nucleotide-binding domain ALX04_RS10865 PF01431 Peptidase family M13 ALX04_RS10865 PF05649 Peptidase family M13 ALX04_RS10885 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALX04_RS10885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALX04_RS10935 PF00230 Major intrinsic protein ALX04_RS10940 PF03109 ABC1 family ALX04_RS10945 PF05525 Branched-chain amino acid transport protein ALX04_RS10950 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ALX04_RS10955 PF02449 Beta-galactosidase ALX04_RS10955 PF08533 Beta-galactosidase C-terminal domain ALX04_RS10955 PF08532 Beta-galactosidase trimerisation domain ALX04_RS10960 PF00356 Bacterial regulatory proteins, lacI family ALX04_RS10970 PF07690 Major Facilitator Superfamily ALX04_RS10990 PF02661 Fic/DOC family ALX04_RS10990 PF18543 Intracellular delivery domain ALX04_RS10995 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA ALX04_RS11000 PF00356 Bacterial regulatory proteins, lacI family ALX04_RS11005 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ALX04_RS11005 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ALX04_RS11010 PF16363 GDP-mannose 4,6 dehydratase ALX04_RS11015 PF08544 GHMP kinases C terminal ALX04_RS11015 PF00288 GHMP kinases N terminal domain ALX04_RS11015 PF10509 Galactokinase galactose-binding signature ALX04_RS11020 PF00703 Glycosyl hydrolases family 2 ALX04_RS11020 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ALX04_RS11020 PF02837 Glycosyl hydrolases family 2, sugar binding domain ALX04_RS11025 PF02929 Beta galactosidase small chain ALX04_RS11030 PF16875 Glycosyl hydrolase family 36 N-terminal domain ALX04_RS11030 PF16874 Glycosyl hydrolase family 36 C-terminal domain ALX04_RS11035 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ALX04_RS11040 PF01263 Aldose 1-epimerase ALX04_RS11045 PF00356 Bacterial regulatory proteins, lacI family ALX04_RS11050 PF00248 Aldo/keto reductase family ALX04_RS11060 PF00890 FAD binding domain ALX04_RS11060 PF04205 FMN-binding domain ALX04_RS11060 PF03358 NADPH-dependent FMN reductase ALX04_RS11065 PF02424 ApbE family ALX04_RS11070 PF01487 Type I 3-dehydroquinase ALX04_RS11075 PF08501 Shikimate dehydrogenase substrate binding domain ALX04_RS11075 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ALX04_RS11080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALX04_RS11080 PF03466 LysR substrate binding domain ALX04_RS11085 PF07690 Major Facilitator Superfamily ALX04_RS11090 PF08501 Shikimate dehydrogenase substrate binding domain ALX04_RS11090 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ALX04_RS11095 PF08501 Shikimate dehydrogenase substrate binding domain ALX04_RS11095 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ALX04_RS11110 PF03466 LysR substrate binding domain ALX04_RS11110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALX04_RS11115 PF07690 Major Facilitator Superfamily ALX04_RS11125 PF12697 Alpha/beta hydrolase family ALX04_RS11130 PF07702 UTRA domain ALX04_RS11130 PF00392 Bacterial regulatory proteins, gntR family ALX04_RS11135 PF02378 Phosphotransferase system, EIIC ALX04_RS11140 PF13580 SIS domain ALX04_RS11145 PF01869 BadF/BadG/BcrA/BcrD ATPase family ALX04_RS11155 PF00232 Glycosyl hydrolase family 1 ALX04_RS11160 PF00367 phosphotransferase system, EIIB ALX04_RS11160 PF02378 Phosphotransferase system, EIIC ALX04_RS11160 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ALX04_RS11165 PF00874 PRD domain ALX04_RS11165 PF03123 CAT RNA binding domain ALX04_RS11170 PF00232 Glycosyl hydrolase family 1 ALX04_RS11175 PF00232 Glycosyl hydrolase family 1 ALX04_RS11180 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ALX04_RS11180 PF00367 phosphotransferase system, EIIB ALX04_RS11180 PF02378 Phosphotransferase system, EIIC ALX04_RS11190 PF03632 Glycosyl hydrolase family 65 central catalytic domain ALX04_RS11190 PF03636 Glycosyl hydrolase family 65, N-terminal domain ALX04_RS11190 PF03633 Glycosyl hydrolase family 65, C-terminal domain ALX04_RS11195 PF00356 Bacterial regulatory proteins, lacI family ALX04_RS11205 PF13802 Galactose mutarotase-like ALX04_RS11205 PF01055 Glycosyl hydrolases family 31 ALX04_RS11205 PF17137 Domain of unknown function (DUF5110) ALX04_RS11205 PF16338 Domain of unknown function (DUF4968) ALX04_RS11215 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family ALX04_RS11225 PF00456 Transketolase, thiamine diphosphate binding domain ALX04_RS11225 PF02779 Transketolase, pyrimidine binding domain ALX04_RS11225 PF02780 Transketolase, C-terminal domain ALX04_RS11230 PF00923 Transaldolase/Fructose-6-phosphate aldolase ALX04_RS11235 PF03611 PTS system sugar-specific permease component ALX04_RS11250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ALX04_RS11250 PF00874 PRD domain ALX04_RS11250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ALX04_RS11250 PF08279 HTH domain ALX04_RS11250 PF05043 Mga helix-turn-helix domain ALX04_RS11260 PF00107 Zinc-binding dehydrogenase ALX04_RS11260 PF08240 Alcohol dehydrogenase GroES-like domain ALX04_RS11265 PF03611 PTS system sugar-specific permease component ALX04_RS11270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ALX04_RS11280 PF00455 DeoR C terminal sensor domain ALX04_RS11280 PF08220 DeoR-like helix-turn-helix domain ALX04_RS11285 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase ALX04_RS11285 PF09363 XFP C-terminal domain ALX04_RS11285 PF09364 XFP N-terminal domain ALX04_RS11295 PF12464 Maltose acetyltransferase ALX04_RS11295 PF14602 Hexapeptide repeat of succinyl-transferase ALX04_RS11300 PF02610 L-arabinose isomerase ALX04_RS11300 PF11762 L-arabinose isomerase C-terminal domain ALX04_RS11305 PF00596 Class II Aldolase and Adducin N-terminal domain ALX04_RS11315 PF00083 Sugar (and other) transporter ALX04_RS11320 PF00392 Bacterial regulatory proteins, gntR family ALX04_RS11325 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ALX04_RS11330 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALX04_RS11330 PF14759 Reductase C-terminal ALX04_RS11355 PF04226 Transglycosylase associated protein ALX04_RS11360 PF06628 Catalase-related immune-responsive ALX04_RS11360 PF00199 Catalase ALX04_RS11365 PF03960 ArsC family ALX04_RS11370 PF04397 LytTr DNA-binding domain ALX04_RS11370 PF00072 Response regulator receiver domain ALX04_RS11385 PF04647 Accessory gene regulator B ALX04_RS11390 PF17871 AAA lid domain ALX04_RS11390 PF10431 C-terminal, D2-small domain, of ClpB protein ALX04_RS11390 PF07724 AAA domain (Cdc48 subfamily) ALX04_RS11390 PF00004 ATPase family associated with various cellular activities (AAA) ALX04_RS11400 PF01070 FMN-dependent dehydrogenase ALX04_RS11405 PF00205 Thiamine pyrophosphate enzyme, central domain ALX04_RS11405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ALX04_RS11405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALX04_RS11410 PF02082 Transcriptional regulator ALX04_RS11415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALX04_RS11415 PF00205 Thiamine pyrophosphate enzyme, central domain ALX04_RS11415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ALX04_RS11425 PF03612 Sorbitol phosphotransferase enzyme II N-terminus ALX04_RS11425 PF07663 Sorbitol phosphotransferase enzyme II C-terminus ALX04_RS11430 PF03608 PTS system enzyme II sorbitol-specific factor ALX04_RS11445 PF00106 short chain dehydrogenase ALX04_RS11450 PF06800 Sugar transport protein ALX04_RS11455 PF05025 RbsD / FucU transport protein family ALX04_RS11460 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ALX04_RS11460 PF00294 pfkB family carbohydrate kinase ALX04_RS11465 PF00356 Bacterial regulatory proteins, lacI family ALX04_RS11470 PF00465 Iron-containing alcohol dehydrogenase ALX04_RS11470 PF00171 Aldehyde dehydrogenase family ALX04_RS11480 PF10400 Virulence activator alpha C-term ALX04_RS11480 PF03551 Transcriptional regulator PadR-like family ALX04_RS11485 PF05870 Phenolic acid decarboxylase (PAD) ALX04_RS11500 PF02645 Uncharacterised protein, DegV family COG1307 ALX04_RS11510 PF03051 Peptidase C1-like family ALX04_RS11515 PF10502 Signal peptidase, peptidase S26 ALX04_RS11540 PF01134 Glucose inhibited division protein A ALX04_RS11540 PF13932 GidA associated domain ALX04_RS11545 PF01926 50S ribosome-binding GTPase ALX04_RS11545 PF12631 MnmE helical domain ALX04_RS11545 PF10396 GTP-binding protein TrmE N-terminus ALX04_RS11550 PF14804 Jag N-terminus ALX04_RS11550 PF01424 R3H domain ALX04_RS11555 PF02096 60Kd inner membrane protein ALX04_RS11560 PF00825 Ribonuclease P ALX04_RS11565 PF00468 Ribosomal protein L34 ALX04_RS11570 PF00308 Bacterial dnaA protein ALX04_RS11570 PF11638 DnaA N-terminal domain ALX04_RS11570 PF08299 Bacterial dnaA protein helix-turn-helix ALX04_RS11575 PF00712 DNA polymerase III beta subunit, N-terminal domain ALX04_RS11575 PF02767 DNA polymerase III beta subunit, central domain ALX04_RS11575 PF02768 DNA polymerase III beta subunit, C-terminal domain ALX04_RS11585 PF02463 RecF/RecN/SMC N terminal domain ALX04_RS11590 PF01751 Toprim domain ALX04_RS11590 PF00204 DNA gyrase B ALX04_RS11590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALX04_RS11590 PF00986 DNA gyrase B subunit, carboxyl terminus ALX04_RS11595 PF03989 DNA gyrase C-terminal domain, beta-propeller ALX04_RS11595 PF00521 DNA gyrase/topoisomerase IV, subunit A ALX04_RS11600 PF01250 Ribosomal protein S6 ALX04_RS11605 PF00436 Single-strand binding protein family ALX04_RS11610 PF01084 Ribosomal protein S18 ALX04_RS11615 PF02272 DHHA1 domain ALX04_RS11615 PF01368 DHH family ALX04_RS11620 PF01281 Ribosomal protein L9, N-terminal domain ALX04_RS11620 PF03948 Ribosomal protein L9, C-terminal domain ALX04_RS11625 PF03796 DnaB-like helicase C terminal domain ALX04_RS11625 PF00772 DnaB-like helicase N terminal domain ALX04_RS11630 PF07690 Major Facilitator Superfamily ALX04_RS11635 PF00696 Amino acid kinase family ALX04_RS11640 PF00171 Aldehyde dehydrogenase family ALX04_RS11645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALX04_RS11655 PF00483 Nucleotidyl transferase ALX04_RS11660 PF00483 Nucleotidyl transferase ALX04_RS11665 PF00534 Glycosyl transferases group 1 ALX04_RS11665 PF08323 Starch synthase catalytic domain ALX04_RS11670 PF00343 Carbohydrate phosphorylase ALX04_RS11675 PF02903 Alpha amylase, N-terminal ig-like domain ALX04_RS11675 PF00686 Starch binding domain ALX04_RS11675 PF00128 Alpha amylase, catalytic domain ALX04_RS11685 PF13419 Haloacid dehalogenase-like hydrolase ALX04_RS11690 PF03632 Glycosyl hydrolase family 65 central catalytic domain ALX04_RS11690 PF03633 Glycosyl hydrolase family 65, C-terminal domain ALX04_RS11690 PF03636 Glycosyl hydrolase family 65, N-terminal domain ALX04_RS11700 PF00313 'Cold-shock' DNA-binding domain ALX04_RS11715 PF00072 Response regulator receiver domain ALX04_RS11715 PF00486 Transcriptional regulatory protein, C terminal ALX04_RS11720 PF14827 Double sensory domain of two-component sensor kinase ALX04_RS11720 PF13426 PAS domain ALX04_RS11720 PF00512 His Kinase A (phospho-acceptor) domain ALX04_RS11720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALX04_RS11720 PF00672 HAMP domain ALX04_RS11730 PF09648 YycH protein ALX04_RS11735 PF00753 Metallo-beta-lactamase superfamily ALX04_RS11740 PF13180 PDZ domain ALX04_RS11745 PF02590 Predicted SPOUT methyltransferase ALX04_RS11755 PF00171 Aldehyde dehydrogenase family ALX04_RS11760 PF13936 Helix-turn-helix domain ALX04_RS11765 PF03167 Uracil DNA glycosylase superfamily ALX04_RS11785 PF04205 FMN-binding domain ALX04_RS11785 PF00890 FAD binding domain ALX04_RS11785 PF03358 NADPH-dependent FMN reductase ALX04_RS11790 PF00939 Sodium:sulfate symporter transmembrane region ALX04_RS11805 PF01451 Low molecular weight phosphotyrosine protein phosphatase ALX04_RS11820 PF00881 Nitroreductase family ALX04_RS11825 PF17853 GGDEF-like domain ALX04_RS11825 PF07905 Purine catabolism regulatory protein-like family ALX04_RS11825 PF13556 PucR C-terminal helix-turn-helix domain ALX04_RS11835 PF13419 Haloacid dehalogenase-like hydrolase ALX04_RS11840 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family ALX04_RS11850 PF13350 Tyrosine phosphatase family ALX04_RS11855 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ALX04_RS11855 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ALX04_RS11875 PF02525 Flavodoxin-like fold ALX04_RS11880 PF14492 Elongation Factor G, domain II ALX04_RS11880 PF03764 Elongation factor G, domain IV ALX04_RS11880 PF00009 Elongation factor Tu GTP binding domain ALX04_RS11880 PF00679 Elongation factor G C-terminus ALX04_RS11910 PF00107 Zinc-binding dehydrogenase ALX04_RS11910 PF08240 Alcohol dehydrogenase GroES-like domain ALX04_RS11920 PF01554 MatE ALX04_RS11940 PF00561 alpha/beta hydrolase fold ALX04_RS11945 PF03883 Peroxide stress protein YaaA ALX04_RS11955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALX04_RS11980 PF00005 ABC transporter ALX04_RS11985 PF02361 Cobalt transport protein ALX04_RS11990 PF13190 PDGLE domain ALX04_RS11990 PF01891 Cobalt uptake substrate-specific transmembrane region ALX04_RS11995 PF13545 Crp-like helix-turn-helix domain ALX04_RS12000 PF09861 Lactate racemase N-terminal domain ALX04_RS12005 PF00731 AIR carboxylase ALX04_RS12010 PF01969 Protein of unknown function DUF111 ALX04_RS12015 PF01969 Protein of unknown function DUF111 ALX04_RS12020 PF00230 Major intrinsic protein ALX04_RS12025 PF02540 NAD synthase ALX04_RS12030 PF00107 Zinc-binding dehydrogenase ALX04_RS12030 PF08240 Alcohol dehydrogenase GroES-like domain ALX04_RS12035 PF02110 Hydroxyethylthiazole kinase family ALX04_RS12040 PF08543 Phosphomethylpyrimidine kinase ALX04_RS12045 PF02581 Thiamine monophosphate synthase ALX04_RS12055 PF07722 Peptidase C26 ALX04_RS12065 PF13344 Haloacid dehalogenase-like hydrolase ALX04_RS12065 PF00293 NUDIX domain ALX04_RS12070 PF00324 Amino acid permease ALX04_RS12085 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 ALX04_RS12085 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 ALX04_RS12085 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 ALX04_RS12085 PF13395 HNH endonuclease ALX04_RS12090 PF01867 CRISPR associated protein Cas1 ALX04_RS12095 PF09827 CRISPR associated protein Cas2 ALX04_RS12105 PF00689 Cation transporting ATPase, C-terminus ALX04_RS12105 PF00690 Cation transporter/ATPase, N-terminus ALX04_RS12110 PF01048 Phosphorylase superfamily ALX04_RS12115 PF04024 PspC domain ALX04_RS12130 PF00011 Hsp20/alpha crystallin family ALX04_RS12145 PF00083 Sugar (and other) transporter ALX04_RS12145 PF07690 Major Facilitator Superfamily ALX04_RS12155 PF07690 Major Facilitator Superfamily ALX04_RS12160 PF00248 Aldo/keto reductase family ALX04_RS12165 PF00248 Aldo/keto reductase family ALX04_RS12175 PF06100 MCRA family ALX04_RS12190 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ALX04_RS12195 PF02361 Cobalt transport protein ALX04_RS12200 PF00005 ABC transporter ALX04_RS12200 PF12558 ATP-binding cassette cobalt transporter ALX04_RS12205 PF07155 ECF-type riboflavin transporter, S component ALX04_RS12215 PF00392 Bacterial regulatory proteins, gntR family ALX04_RS12215 PF07702 UTRA domain ALX04_RS12240 PF00106 short chain dehydrogenase ALX04_RS12245 PF13732 Domain of unknown function (DUF4162) ALX04_RS12245 PF00005 ABC transporter ALX04_RS12260 PF00766 Electron transfer flavoprotein FAD-binding domain ALX04_RS12260 PF01012 Electron transfer flavoprotein domain ALX04_RS12265 PF12822 ECF transporter, substrate-specific component ALX04_RS12270 PF00440 Bacterial regulatory proteins, tetR family ALX04_RS12270 PF14278 Transcriptional regulator C-terminal region ALX04_RS12275 PF02733 Dak1 domain ALX04_RS12280 PF02733 Dak1 domain ALX04_RS12285 PF02734 DAK2 domain ALX04_RS12290 PF03610 PTS system fructose IIA component ALX04_RS12295 PF00230 Major intrinsic protein ALX04_RS12300 PF00356 Bacterial regulatory proteins, lacI family ALX04_RS12305 PF00356 Bacterial regulatory proteins, lacI family ALX04_RS12310 PF00128 Alpha amylase, catalytic domain ALX04_RS12315 PF13416 Bacterial extracellular solute-binding protein ALX04_RS12320 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS12325 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS12335 PF11896 Domain of unknown function (DUF3416) ALX04_RS12335 PF00128 Alpha amylase, catalytic domain ALX04_RS12340 PF17912 MalK OB fold domain ALX04_RS12340 PF00005 ABC transporter ALX04_RS12340 PF03459 TOBE domain ALX04_RS12345 PF03636 Glycosyl hydrolase family 65, N-terminal domain ALX04_RS12345 PF03632 Glycosyl hydrolase family 65 central catalytic domain ALX04_RS12345 PF03633 Glycosyl hydrolase family 65, C-terminal domain ALX04_RS12360 PF00480 ROK family ALX04_RS12365 PF16874 Glycosyl hydrolase family 36 C-terminal domain ALX04_RS12365 PF16875 Glycosyl hydrolase family 36 N-terminal domain ALX04_RS12370 PF00367 phosphotransferase system, EIIB ALX04_RS12370 PF02378 Phosphotransferase system, EIIC ALX04_RS12370 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ALX04_RS12375 PF08244 Glycosyl hydrolases family 32 C terminal ALX04_RS12375 PF00251 Glycosyl hydrolases family 32 N-terminal domain ALX04_RS12380 PF00356 Bacterial regulatory proteins, lacI family ALX04_RS12385 PF00128 Alpha amylase, catalytic domain ALX04_RS12395 PF03553 Na+/H+ antiporter family ALX04_RS12400 PF00128 Alpha amylase, catalytic domain ALX04_RS12405 PF03466 LysR substrate binding domain ALX04_RS12405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALX04_RS12425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALX04_RS12435 PF01842 ACT domain ALX04_RS12435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALX04_RS12435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALX04_RS12440 PF00266 Aminotransferase class-V ALX04_RS12445 PF00300 Histidine phosphatase superfamily (branch 1) ALX04_RS12450 PF00248 Aldo/keto reductase family ALX04_RS12465 PF05670 NFACT protein RNA binding domain ALX04_RS12470 PF00871 Acetokinase family ALX04_RS12480 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ALX04_RS12485 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ALX04_RS12490 PF12848 ABC transporter ALX04_RS12490 PF00005 ABC transporter ALX04_RS12500 PF00005 ABC transporter ALX04_RS12510 PF00255 Glutathione peroxidase ALX04_RS12515 PF00248 Aldo/keto reductase family ALX04_RS12520 PF03449 Transcription elongation factor, N-terminal ALX04_RS12520 PF01272 Transcription elongation factor, GreA/GreB, C-term ALX04_RS12535 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ALX04_RS12545 PF04205 FMN-binding domain ALX04_RS12545 PF00890 FAD binding domain ALX04_RS12555 PF03577 Peptidase family C69 ALX04_RS12560 PF02378 Phosphotransferase system, EIIC ALX04_RS12560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ALX04_RS12570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ALX04_RS12575 PF01232 Mannitol dehydrogenase Rossmann domain ALX04_RS12575 PF08125 Mannitol dehydrogenase C-terminal domain ALX04_RS12585 PF00085 Thioredoxin ALX04_RS12605 PF00334 Nucleoside diphosphate kinase ALX04_RS12615 PF03358 NADPH-dependent FMN reductase ALX04_RS12620 PF00392 Bacterial regulatory proteins, gntR family ALX04_RS12620 PF07702 UTRA domain ALX04_RS12625 PF02378 Phosphotransferase system, EIIC ALX04_RS12640 PF01979 Amidohydrolase family ALX04_RS12645 PF03841 L-seryl-tRNA selenium transferase ALX04_RS12660 PF06426 Serine acetyltransferase, N-terminal ALX04_RS12660 PF00132 Bacterial transferase hexapeptide (six repeats) ALX04_RS12665 PF01053 Cys/Met metabolism PLP-dependent enzyme ALX04_RS12670 PF00291 Pyridoxal-phosphate dependent enzyme ALX04_RS12675 PF00557 Metallopeptidase family M24 ALX04_RS12700 PF07702 UTRA domain ALX04_RS12700 PF00392 Bacterial regulatory proteins, gntR family ALX04_RS12705 PF16657 Maltogenic Amylase, C-terminal domain ALX04_RS12705 PF00128 Alpha amylase, catalytic domain ALX04_RS12710 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ALX04_RS12710 PF00367 phosphotransferase system, EIIB ALX04_RS12710 PF02378 Phosphotransferase system, EIIC ALX04_RS12715 PF00367 phosphotransferase system, EIIB ALX04_RS12715 PF02378 Phosphotransferase system, EIIC ALX04_RS12715 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ALX04_RS12725 PF01467 Cytidylyltransferase-like ALX04_RS12730 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ALX04_RS12735 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ALX04_RS12750 PF02441 Flavoprotein ALX04_RS12760 PF02082 Transcriptional regulator ALX04_RS12765 PF00440 Bacterial regulatory proteins, tetR family ALX04_RS12770 PF01566 Natural resistance-associated macrophage protein ALX04_RS12790 PF07690 Major Facilitator Superfamily ALX04_RS12800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALX04_RS12800 PF00512 His Kinase A (phospho-acceptor) domain ALX04_RS12800 PF18719 ArlS sensor domain ALX04_RS12805 PF00486 Transcriptional regulatory protein, C terminal ALX04_RS12805 PF00072 Response regulator receiver domain ALX04_RS12815 PF01418 Helix-turn-helix domain, rpiR family ALX04_RS12815 PF01380 SIS domain ALX04_RS12820 PF02378 Phosphotransferase system, EIIC ALX04_RS12835 PF03816 Cell envelope-related transcriptional attenuator domain ALX04_RS12840 PF01565 FAD binding domain ALX04_RS12840 PF02913 FAD linked oxidases, C-terminal domain ALX04_RS12850 PF04607 Region found in RelA / SpoT proteins ALX04_RS12860 PF03176 MMPL family ALX04_RS12865 PF03352 Methyladenine glycosylase ALX04_RS12875 PF02687 FtsX-like permease family ALX04_RS12875 PF12704 MacB-like periplasmic core domain ALX04_RS12880 PF00005 ABC transporter ALX04_RS12895 PF06737 Transglycosylase-like domain ALX04_RS12900 PF01476 LysM domain ALX04_RS12900 PF05257 CHAP domain ALX04_RS12930 PF00871 Acetokinase family ALX04_RS12940 PF01047 MarR family ALX04_RS12945 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALX04_RS12955 PF13416 Bacterial extracellular solute-binding protein ALX04_RS12970 PF08402 TOBE domain ALX04_RS12970 PF00005 ABC transporter ALX04_RS13000 PF00392 Bacterial regulatory proteins, gntR family ALX04_RS13005 PF00005 ABC transporter ALX04_RS13015 PF00465 Iron-containing alcohol dehydrogenase ALX04_RS13015 PF00171 Aldehyde dehydrogenase family ALX04_RS13020 PF01116 Fructose-bisphosphate aldolase class-II ALX04_RS13040 PF03577 Peptidase family C69 ALX04_RS13050 PF02632 BioY family ALX04_RS13065 PF00155 Aminotransferase class I and II ALX04_RS13075 PF01061 ABC-2 type transporter ALX04_RS13080 PF00005 ABC transporter ALX04_RS13095 PF07690 Major Facilitator Superfamily ALX04_RS13100 PF00909 Ammonium Transporter Family ALX04_RS13105 PF00056 lactate/malate dehydrogenase, NAD binding domain ALX04_RS13105 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ALX04_RS13120 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ALX04_RS13125 PF07732 Multicopper oxidase ALX04_RS13125 PF07731 Multicopper oxidase ALX04_RS13130 PF06993 Protein of unknown function (DUF1304) ALX04_RS13135 PF01161 Phosphatidylethanolamine-binding protein ALX04_RS13160 PF01156 Inosine-uridine preferring nucleoside hydrolase ALX04_RS13165 PF00106 short chain dehydrogenase ALX04_RS13180 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS13185 PF00005 ABC transporter ALX04_RS13190 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALX04_RS13190 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALX04_RS13195 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ALX04_RS13195 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ALX04_RS13200 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ALX04_RS13200 PF01266 FAD dependent oxidoreductase ALX04_RS13205 PF00230 Major intrinsic protein ALX04_RS13305 PF12464 Maltose acetyltransferase ALX04_RS13305 PF00132 Bacterial transferase hexapeptide (six repeats) ALX04_RS13320 PF12833 Helix-turn-helix domain ALX04_RS13320 PF02311 AraC-like ligand binding domain ALX04_RS13330 PF05525 Branched-chain amino acid transport protein ALX04_RS13335 PF00999 Sodium/hydrogen exchanger family ALX04_RS13370 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ALX04_RS13370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALX04_RS13370 PF17203 Single cache domain 3 ALX04_RS13370 PF00989 PAS fold ALX04_RS13375 PF00072 Response regulator receiver domain ALX04_RS13375 PF04397 LytTr DNA-binding domain ALX04_RS13395 PF03412 Peptidase C39 family ALX04_RS13395 PF00664 ABC transporter transmembrane region ALX04_RS13395 PF00005 ABC transporter ALX04_RS13430 PF13538 UvrD-like helicase C-terminal domain ALX04_RS13435 PF00795 Carbon-nitrogen hydrolase ALX04_RS13440 PF00579 tRNA synthetases class I (W and Y) ALX04_RS13445 PF00392 Bacterial regulatory proteins, gntR family ALX04_RS13445 PF07702 UTRA domain ALX04_RS13450 PF02378 Phosphotransferase system, EIIC ALX04_RS13465 PF02378 Phosphotransferase system, EIIC ALX04_RS13470 PF00232 Glycosyl hydrolase family 1 ALX04_RS13475 PF00480 ROK family ALX04_RS13480 PF01418 Helix-turn-helix domain, rpiR family ALX04_RS13480 PF01380 SIS domain ALX04_RS13485 PF01207 Dihydrouridine synthase (Dus) ALX04_RS13490 PF02541 Ppx/GppA phosphatase family ALX04_RS13495 PF00368 Hydroxymethylglutaryl-coenzyme A reductase ALX04_RS13505 PF02146 Sir2 family ALX04_RS13510 PF01904 Protein of unknown function DUF72 ALX04_RS13520 PF08264 Anticodon-binding domain of tRNA ALX04_RS13520 PF01588 Putative tRNA binding domain ALX04_RS13520 PF09334 tRNA synthetases class I (M) ALX04_RS13525 PF07690 Major Facilitator Superfamily ALX04_RS13530 PF01026 TatD related DNase ALX04_RS13535 PF13331 Domain of unknown function (DUF4093) ALX04_RS13540 PF00398 Ribosomal RNA adenine dimethylase ALX04_RS13545 PF06257 Biofilm formation stimulator VEG ALX04_RS13550 PF08544 GHMP kinases C terminal ALX04_RS13550 PF00288 GHMP kinases N terminal domain ALX04_RS13555 PF12146 Serine aminopeptidase, S33 ALX04_RS13560 PF00005 ABC transporter ALX04_RS13565 PF00950 ABC 3 transport family ALX04_RS13570 PF00156 Phosphoribosyl transferase domain ALX04_RS13570 PF09182 Bacterial purine repressor, N-terminal ALX04_RS13575 PF00132 Bacterial transferase hexapeptide (six repeats) ALX04_RS13575 PF00483 Nucleotidyl transferase ALX04_RS13585 PF14572 Phosphoribosyl synthetase-associated domain ALX04_RS13585 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ALX04_RS13605 PF01966 HD domain ALX04_RS13610 PF03099 Biotin/lipoate A/B protein ligase family ALX04_RS13620 PF05066 HB1, ASXL, restriction endonuclease HTH domain ALX04_RS13625 PF06418 CTP synthase N-terminus ALX04_RS13625 PF00117 Glutamine amidotransferase class-I ALX04_RS13630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ALX04_RS13630 PF02403 Seryl-tRNA synthetase N-terminal domain ALX04_RS13645 PF01842 ACT domain ALX04_RS13645 PF03315 Serine dehydratase beta chain ALX04_RS13650 PF03313 Serine dehydratase alpha chain ALX04_RS13665 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ALX04_RS13670 PF07498 Rho termination factor, N-terminal domain ALX04_RS13670 PF07497 Rho termination factor, RNA-binding domain ALX04_RS13670 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ALX04_RS13675 PF01197 Ribosomal protein L31 ALX04_RS13685 PF04203 Sortase domain ALX04_RS13690 PF04011 LemA family ALX04_RS13695 PF01435 Peptidase family M48 ALX04_RS13705 PF01225 Mur ligase family, catalytic domain ALX04_RS13705 PF02875 Mur ligase family, glutamate ligase domain ALX04_RS13705 PF08245 Mur ligase middle domain ALX04_RS13710 PF00270 DEAD/DEAH box helicase ALX04_RS13710 PF00271 Helicase conserved C-terminal domain ALX04_RS13720 PF01648 4'-phosphopantetheinyl transferase superfamily ALX04_RS13725 PF01168 Alanine racemase, N-terminal domain ALX04_RS13725 PF00842 Alanine racemase, C-terminal domain ALX04_RS13730 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ALX04_RS13735 PF02705 K+ potassium transporter ALX04_RS13750 PF00005 ABC transporter ALX04_RS13755 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALX04_RS13755 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ALX04_RS13760 PF00117 Glutamine amidotransferase class-I ALX04_RS13760 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ALX04_RS13765 PF02774 Semialdehyde dehydrogenase, dimerisation domain ALX04_RS13765 PF01118 Semialdehyde dehydrogenase, NAD binding domain ALX04_RS13770 PF01960 ArgJ family ALX04_RS13775 PF00696 Amino acid kinase family ALX04_RS13780 PF00202 Aminotransferase class-III ALX04_RS13785 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ALX04_RS13785 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ALX04_RS13805 PF00056 lactate/malate dehydrogenase, NAD binding domain ALX04_RS13805 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ALX04_RS13810 PF01195 Peptidyl-tRNA hydrolase ALX04_RS13815 PF00271 Helicase conserved C-terminal domain ALX04_RS13815 PF00270 DEAD/DEAH box helicase ALX04_RS13815 PF17757 UvrB interaction domain ALX04_RS13815 PF02559 CarD-like/TRCF domain ALX04_RS13815 PF03461 TRCF domain ALX04_RS13820 PF14667 Polysaccharide biosynthesis C-terminal domain ALX04_RS13820 PF01943 Polysaccharide biosynthesis protein ALX04_RS13825 PF01479 S4 domain ALX04_RS13835 PF00575 S1 RNA binding domain ALX04_RS13840 PF01171 PP-loop family ALX04_RS13840 PF11734 TilS substrate C-terminal domain ALX04_RS13845 PF11734 TilS substrate C-terminal domain ALX04_RS13845 PF00156 Phosphoribosyl transferase domain ALX04_RS13845 PF01171 PP-loop family ALX04_RS13850 PF01434 Peptidase family M41 ALX04_RS13850 PF06480 FtsH Extracellular ALX04_RS13850 PF17862 AAA+ lid domain ALX04_RS13850 PF00004 ATPase family associated with various cellular activities (AAA) ALX04_RS13855 PF01430 Hsp33 protein ALX04_RS13860 PF01207 Dihydrouridine synthase (Dus) ALX04_RS13865 PF01336 OB-fold nucleic acid binding domain ALX04_RS13865 PF00152 tRNA synthetases class II (D, K and N) ALX04_RS13905 PF00854 POT family ALX04_RS13925 PF00589 Phage integrase family ALX04_RS13925 PF14659 Phage integrase, N-terminal SAM-like domain ALX04_RS13990 PF13936 Helix-turn-helix domain ALX04_RS14000 PF13520 Amino acid permease ALX04_RS14045 PF04973 Nicotinamide mononucleotide transporter ALX04_RS14050 PF03807 NADP oxidoreductase coenzyme F420-dependent ALX04_RS14050 PF14748 Pyrroline-5-carboxylate reductase dimerisation ALX04_RS14055 PF13382 Adenine deaminase C-terminal domain ALX04_RS14055 PF01979 Amidohydrolase family ALX04_RS14060 PF00392 Bacterial regulatory proteins, gntR family ALX04_RS14060 PF07702 UTRA domain ALX04_RS14065 PF03808 Glycosyl transferase WecB/TagA/CpsF family ALX04_RS14070 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ALX04_RS14070 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain ALX04_RS14070 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ALX04_RS14075 PF02540 NAD synthase ALX04_RS14080 PF00689 Cation transporting ATPase, C-terminus ALX04_RS14080 PF00690 Cation transporter/ATPase, N-terminus ALX04_RS14090 PF09371 Tex-like protein N-terminal domain ALX04_RS14090 PF16921 Tex protein YqgF-like domain ALX04_RS14090 PF00575 S1 RNA binding domain ALX04_RS14090 PF17674 HHH domain ALX04_RS14095 PF10263 SprT-like family ALX04_RS14100 PF01842 ACT domain ALX04_RS14100 PF03447 Homoserine dehydrogenase, NAD binding domain ALX04_RS14100 PF00742 Homoserine dehydrogenase ALX04_RS14105 PF00288 GHMP kinases N terminal domain ALX04_RS14105 PF08544 GHMP kinases C terminal ALX04_RS14120 PF03830 PTS system sorbose subfamily IIB component ALX04_RS14120 PF03610 PTS system fructose IIA component ALX04_RS14125 PF03609 PTS system sorbose-specific iic component ALX04_RS14130 PF03613 PTS system mannose/fructose/sorbose family IID component ALX04_RS14140 PF00158 Sigma-54 interaction domain ALX04_RS14140 PF03610 PTS system fructose IIA component ALX04_RS14140 PF00874 PRD domain ALX04_RS14145 PF03610 PTS system fructose IIA component ALX04_RS14145 PF03830 PTS system sorbose subfamily IIB component ALX04_RS14150 PF03830 PTS system sorbose subfamily IIB component ALX04_RS14150 PF03610 PTS system fructose IIA component ALX04_RS14155 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ALX04_RS14155 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ALX04_RS14165 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALX04_RS14165 PF00289 Biotin carboxylase, N-terminal domain ALX04_RS14165 PF02785 Biotin carboxylase C-terminal domain ALX04_RS14170 PF01039 Carboxyl transferase domain ALX04_RS14175 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ALX04_RS14180 PF03816 Cell envelope-related transcriptional attenuator domain ALX04_RS14190 PF00892 EamA-like transporter family ALX04_RS14195 PF00300 Histidine phosphatase superfamily (branch 1) ALX04_RS14205 PF03051 Peptidase C1-like family ALX04_RS14210 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ALX04_RS14220 PF00692 dUTPase ALX04_RS14235 PF18073 Rubredoxin metal binding domain ALX04_RS14245 PF00749 tRNA synthetases class I (E and Q), catalytic domain ALX04_RS14250 PF01406 tRNA synthetases class I (C) catalytic domain ALX04_RS14250 PF09190 DALR domain ALX04_RS14255 PF00636 Ribonuclease III domain ALX04_RS14260 PF08032 RNA 2'-O ribose methyltransferase substrate binding ALX04_RS14260 PF00588 SpoU rRNA Methylase family ALX04_RS14275 PF00471 Ribosomal protein L33 ALX04_RS14285 PF02357 Transcription termination factor nusG ALX04_RS14285 PF00467 KOW motif ALX04_RS14295 PF00298 Ribosomal protein L11, RNA binding domain ALX04_RS14295 PF03946 Ribosomal protein L11, N-terminal domain ALX04_RS14300 PF00687 Ribosomal protein L1p/L10e family ALX04_RS14305 PF00466 Ribosomal protein L10 ALX04_RS14310 PF16320 Ribosomal protein L7/L12 dimerisation domain ALX04_RS14310 PF00542 Ribosomal protein L7/L12 C-terminal domain ALX04_RS14325 PF09924 Uncharacterised conserved protein (DUF2156) ALX04_RS14325 PF03706 Lysylphosphatidylglycerol synthase TM region ALX04_RS14330 PF03641 Possible lysine decarboxylase ALX04_RS14335 PF00268 Ribonucleotide reductase, small chain ALX04_RS14340 PF08343 Ribonucleotide reductase N-terminal ALX04_RS14340 PF02867 Ribonucleotide reductase, barrel domain ALX04_RS14340 PF00317 Ribonucleotide reductase, all-alpha domain ALX04_RS14345 PF00462 Glutaredoxin ALX04_RS14350 PF05175 Methyltransferase small domain ALX04_RS14355 PF14437 MafB19-like deaminase ALX04_RS14365 PF12169 DNA polymerase III subunits gamma and tau domain III ALX04_RS14370 PF02575 YbaB/EbfC DNA-binding family ALX04_RS14375 PF13662 Toprim domain ALX04_RS14375 PF02132 RecR protein ALX04_RS14385 PF02223 Thymidylate kinase ALX04_RS14390 PF06153 Cyclic-di-AMP receptor ALX04_RS14395 PF09115 DNA polymerase III, delta subunit, C terminal ALX04_RS14400 PF06156 Initiation control protein YabA ALX04_RS14405 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ALX04_RS14415 PF16363 GDP-mannose 4,6 dehydratase ALX04_RS14420 PF00266 Aminotransferase class-V ALX04_RS14425 PF13419 Haloacid dehalogenase-like hydrolase ALX04_RS14430 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS14435 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS14440 PF00005 ABC transporter ALX04_RS14450 PF00814 Glycoprotease family ALX04_RS14455 PF00583 Acetyltransferase (GNAT) family ALX04_RS14460 PF00583 Acetyltransferase (GNAT) family ALX04_RS14465 PF00814 Glycoprotease family ALX04_RS14475 PF12848 ABC transporter ALX04_RS14475 PF00005 ABC transporter ALX04_RS14475 PF16326 ABC transporter C-terminal domain ALX04_RS14480 PF06971 Putative DNA-binding protein N-terminus ALX04_RS14480 PF02629 CoA binding domain ALX04_RS14485 PF02517 CPBP intramembrane metalloprotease ALX04_RS14490 PF00166 Chaperonin 10 Kd subunit ALX04_RS14495 PF00118 TCP-1/cpn60 chaperonin family ALX04_RS14500 PF13520 Amino acid permease ALX04_RS14505 PF00953 Glycosyl transferase family 4 ALX04_RS14510 PF12849 PBP superfamily domain ALX04_RS14515 PF09186 Domain of unknown function (DUF1949) ALX04_RS14515 PF01205 Uncharacterized protein family UPF0029 ALX04_RS14520 PF00271 Helicase conserved C-terminal domain ALX04_RS14520 PF04851 Type III restriction enzyme, res subunit ALX04_RS14530 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ALX04_RS14530 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ALX04_RS14535 PF07516 SecA Wing and Scaffold domain ALX04_RS14535 PF01043 SecA preprotein cross-linking domain ALX04_RS14535 PF07517 SecA DEAD-like domain ALX04_RS14540 PF03462 PCRF domain ALX04_RS14540 PF00472 RF-1 domain ALX04_RS14545 PF17820 PDZ domain ALX04_RS14550 PF00486 Transcriptional regulatory protein, C terminal ALX04_RS14550 PF00072 Response regulator receiver domain ALX04_RS14555 PF16736 Single Cache-like ALX04_RS14555 PF00989 PAS fold ALX04_RS14555 PF00512 His Kinase A (phospho-acceptor) domain ALX04_RS14555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALX04_RS14560 PF12849 PBP superfamily domain ALX04_RS14565 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS14570 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS14575 PF00005 ABC transporter ALX04_RS14580 PF00005 ABC transporter ALX04_RS14585 PF01895 PhoU domain ALX04_RS14590 PF04024 PspC domain ALX04_RS14595 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV ALX04_RS14600 PF02603 HPr Serine kinase N terminus ALX04_RS14600 PF07475 HPr Serine kinase C-terminal domain ALX04_RS14605 PF01790 Prolipoprotein diacylglyceryl transferase ALX04_RS14610 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ALX04_RS14610 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ALX04_RS14615 PF00483 Nucleotidyl transferase ALX04_RS14625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALX04_RS14625 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALX04_RS14630 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALX04_RS14635 PF04239 Protein of unknown function (DUF421) ALX04_RS14645 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ALX04_RS14645 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ALX04_RS14645 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ALX04_RS14645 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ALX04_RS14655 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALX04_RS14655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALX04_RS14665 PF07690 Major Facilitator Superfamily ALX04_RS14675 PF00271 Helicase conserved C-terminal domain ALX04_RS14675 PF17757 UvrB interaction domain ALX04_RS14675 PF12344 Ultra-violet resistance protein B ALX04_RS14675 PF02151 UvrB/uvrC motif ALX04_RS14675 PF04851 Type III restriction enzyme, res subunit ALX04_RS14680 PF00005 ABC transporter ALX04_RS14680 PF17755 UvrA DNA-binding domain ALX04_RS14680 PF17760 UvrA interaction domain ALX04_RS14685 PF02664 S-Ribosylhomocysteinase (LuxS) ALX04_RS14690 PF00764 Arginosuccinate synthase ALX04_RS14695 PF00206 Lyase ALX04_RS14695 PF14698 Argininosuccinate lyase C-terminal ALX04_RS14705 PF03668 P-loop ATPase protein family ALX04_RS14710 PF01933 Uncharacterised protein family UPF0052 ALX04_RS14715 PF14527 WhiA LAGLIDADG-like domain ALX04_RS14715 PF02650 WhiA C-terminal HTH domain ALX04_RS14715 PF10298 WhiA N-terminal LAGLIDADG-like domain ALX04_RS14720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALX04_RS14725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALX04_RS14725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALX04_RS14730 PF00574 Clp protease ALX04_RS14740 PF04963 Sigma-54 factor, core binding domain ALX04_RS14740 PF04552 Sigma-54, DNA binding domain ALX04_RS14740 PF00309 Sigma-54 factor, Activator interacting domain (AID) ALX04_RS14745 PF04198 Putative sugar-binding domain ALX04_RS14750 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ALX04_RS14750 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ALX04_RS14755 PF00162 Phosphoglycerate kinase ALX04_RS14760 PF00121 Triosephosphate isomerase ALX04_RS14765 PF03952 Enolase, N-terminal domain ALX04_RS14765 PF00113 Enolase, C-terminal TIM barrel domain ALX04_RS14780 PF00654 Voltage gated chloride channel ALX04_RS14785 PF03840 Preprotein translocase SecG subunit ALX04_RS14790 PF12146 Serine aminopeptidase, S33 ALX04_RS14795 PF17876 Cold shock domain ALX04_RS14795 PF00575 S1 RNA binding domain ALX04_RS14795 PF08206 Ribonuclease B OB domain ALX04_RS14795 PF00773 RNB domain ALX04_RS14800 PF01668 SmpB protein ALX04_RS14810 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS14815 PF00005 ABC transporter ALX04_RS14830 PF03167 Uracil DNA glycosylase superfamily ALX04_RS14835 PF01515 Phosphate acetyl/butaryl transferase ALX04_RS14840 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ALX04_RS14850 PF07733 Bacterial DNA polymerase III alpha NTPase domain ALX04_RS14850 PF14579 Helix-hairpin-helix motif ALX04_RS14850 PF02811 PHP domain ALX04_RS14850 PF11490 DNA polymerase III polC-type N-terminus II ALX04_RS14850 PF00929 Exonuclease ALX04_RS14850 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ALX04_RS14850 PF14480 DNA polymerase III polC-type N-terminus I ALX04_RS14855 PF03372 Endonuclease/Exonuclease/phosphatase family ALX04_RS14860 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ALX04_RS14865 PF01565 FAD binding domain ALX04_RS14865 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ALX04_RS14870 PF00999 Sodium/hydrogen exchanger family ALX04_RS14885 PF02457 DisA bacterial checkpoint controller nucleotide-binding ALX04_RS14895 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ALX04_RS14895 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ALX04_RS14895 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ALX04_RS14895 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ALX04_RS14900 PF01380 SIS domain ALX04_RS14920 PF01263 Aldose 1-epimerase ALX04_RS14935 PF00881 Nitroreductase family ALX04_RS14955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ALX04_RS14955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ALX04_RS14970 PF03960 ArsC family ALX04_RS14985 PF07690 Major Facilitator Superfamily ALX04_RS14995 PF13090 Polyphosphate kinase C-terminal domain 2 ALX04_RS14995 PF02503 Polyphosphate kinase middle domain ALX04_RS14995 PF17941 Polyphosphate kinase C-terminal domain 1 ALX04_RS14995 PF13089 Polyphosphate kinase N-terminal domain ALX04_RS15005 PF04991 LicD family ALX04_RS15020 PF00860 Permease family ALX04_RS15025 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ALX04_RS15025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALX04_RS15025 PF00205 Thiamine pyrophosphate enzyme, central domain ALX04_RS15030 PF06574 FAD synthetase ALX04_RS15030 PF01687 Riboflavin kinase ALX04_RS15035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALX04_RS15035 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ALX04_RS15035 PF00205 Thiamine pyrophosphate enzyme, central domain ALX04_RS15040 PF00561 alpha/beta hydrolase fold ALX04_RS15050 PF01757 Acyltransferase family ALX04_RS15055 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ALX04_RS15055 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ALX04_RS15055 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal ALX04_RS15070 PF13520 Amino acid permease ALX04_RS15085 PF03099 Biotin/lipoate A/B protein ligase family ALX04_RS15085 PF00293 NUDIX domain ALX04_RS15095 PF00625 Guanylate kinase ALX04_RS15100 PF01475 Ferric uptake regulator family ALX04_RS15115 PF13419 Haloacid dehalogenase-like hydrolase ALX04_RS15120 PF00155 Aminotransferase class I and II ALX04_RS15125 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALX04_RS15125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALX04_RS15140 PF00005 ABC transporter ALX04_RS15145 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALX04_RS15150 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS15155 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS15165 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ALX04_RS15165 PF00367 phosphotransferase system, EIIB ALX04_RS15165 PF02378 Phosphotransferase system, EIIC ALX04_RS15175 PF02378 Phosphotransferase system, EIIC ALX04_RS15175 PF00367 phosphotransferase system, EIIB ALX04_RS15180 PF04794 YdjC-like protein ALX04_RS15185 PF13520 Amino acid permease ALX04_RS15195 PF01047 MarR family ALX04_RS15225 PF13167 GTP-binding GTPase N-terminal ALX04_RS15225 PF16360 GTP-binding GTPase Middle Region ALX04_RS15225 PF01926 50S ribosome-binding GTPase ALX04_RS15230 PF13344 Haloacid dehalogenase-like hydrolase ALX04_RS15230 PF00293 NUDIX domain ALX04_RS15235 PF00893 Small Multidrug Resistance protein ALX04_RS15245 PF00300 Histidine phosphatase superfamily (branch 1) ALX04_RS15250 PF00300 Histidine phosphatase superfamily (branch 1) ALX04_RS15255 PF02254 TrkA-N domain ALX04_RS15255 PF02080 TrkA-C domain ALX04_RS15255 PF00999 Sodium/hydrogen exchanger family ALX04_RS15260 PF13673 Acetyltransferase (GNAT) domain ALX04_RS15260 PF04229 GrpB protein ALX04_RS15265 PF09335 SNARE associated Golgi protein ALX04_RS15270 PF13538 UvrD-like helicase C-terminal domain ALX04_RS15275 PF03060 Nitronate monooxygenase ALX04_RS15280 PF00485 Phosphoribulokinase / Uridine kinase family ALX04_RS15285 PF00958 GMP synthase C terminal domain ALX04_RS15285 PF00117 Glutamine amidotransferase class-I ALX04_RS15285 PF02540 NAD synthase ALX04_RS15295 PF01381 Helix-turn-helix ALX04_RS15305 PF02517 CPBP intramembrane metalloprotease ALX04_RS15320 PF01757 Acyltransferase family ALX04_RS15325 PF04226 Transglycosylase associated protein ALX04_RS15340 PF03780 Asp23 family, cell envelope-related function ALX04_RS15350 PF01557 Fumarylacetoacetate (FAA) hydrolase family ALX04_RS15370 PF01433 Peptidase family M1 domain ALX04_RS15370 PF11838 ERAP1-like C-terminal domain ALX04_RS15375 PF12008 Type I restriction and modification enzyme - subunit R C terminal ALX04_RS15375 PF18766 SWI2/SNF2 ATPase ALX04_RS15375 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ALX04_RS15380 PF02384 N-6 DNA Methylase ALX04_RS15380 PF12161 HsdM N-terminal domain ALX04_RS15410 PF06458 MucBP domain ALX04_RS15430 PF00239 Resolvase, N terminal domain ALX04_RS15430 PF02796 Helix-turn-helix domain of resolvase ALX04_RS15465 PF03613 PTS system mannose/fructose/sorbose family IID component ALX04_RS15485 PF00581 Rhodanese-like domain ALX04_RS15490 PF00085 Thioredoxin ALX04_RS15495 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALX04_RS15505 PF00085 Thioredoxin ALX04_RS15510 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALX04_RS15510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALX04_RS15525 PF01047 MarR family ALX04_RS15540 PF13936 Helix-turn-helix domain ALX04_RS15570 PF00817 impB/mucB/samB family ALX04_RS15570 PF11799 impB/mucB/samB family C-terminal domain ALX04_RS15570 PF11798 IMS family HHH motif ALX04_RS15585 PF13614 AAA domain ALX04_RS15590 PF08708 Primase C terminal 1 (PriCT-1) ALX04_RS15650 PF00689 Cation transporting ATPase, C-terminus ALX04_RS15650 PF00690 Cation transporter/ATPase, N-terminus ALX04_RS15665 PF03432 Relaxase/Mobilisation nuclease domain ALX04_RS15705 PF00872 Transposase, Mutator family ALX04_RS15720 PF00270 DEAD/DEAH box helicase ALX04_RS15720 PF00271 Helicase conserved C-terminal domain ALX04_RS15720 PF16124 RecQ zinc-binding ALX04_RS15725 PF04539 Sigma-70 region 3 ALX04_RS15725 PF04545 Sigma-70, region 4 ALX04_RS15725 PF04542 Sigma-70 region 2 ALX04_RS15725 PF00140 Sigma-70 factor, region 1.2 ALX04_RS15725 PF03979 Sigma-70 factor, region 1.1 ALX04_RS15750 PF01471 Putative peptidoglycan binding domain ALX04_RS15750 PF08924 Domain of unknown function (DUF1906) ALX04_RS15760 PF00210 Ferritin-like domain ALX04_RS15765 PF00005 ABC transporter ALX04_RS15775 PF00440 Bacterial regulatory proteins, tetR family ALX04_RS15780 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ALX04_RS15780 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain ALX04_RS15780 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ALX04_RS15785 PF13610 DDE domain ALX04_RS15800 PF01467 Cytidylyltransferase-like ALX04_RS15810 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ALX04_RS15815 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ALX04_RS15815 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ALX04_RS15825 PF00999 Sodium/hydrogen exchanger family ALX04_RS15835 PF00654 Voltage gated chloride channel ALX04_RS15850 PF01476 LysM domain ALX04_RS15850 PF05257 CHAP domain ALX04_RS15855 PF13936 Helix-turn-helix domain ALX04_RS15855 PF00665 Integrase core domain ALX04_RS15865 PF00571 CBS domain ALX04_RS15865 PF00005 ABC transporter ALX04_RS15870 PF00528 Binding-protein-dependent transport system inner membrane component ALX04_RS15875 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ALX04_RS15935 PF00665 Integrase core domain ALX04_RS15935 PF13333 Integrase core domain ALX04_RS15935 PF13276 HTH-like domain ALX04_RS15950 PF03389 MobA/MobL family ALX04_RS15950 PF01443 Viral (Superfamily 1) RNA helicase ALX04_RS15950 PF17841 BID domain of Bartonella effector protein (Bep) ALX04_RS15990 PF01966 HD domain ALX04_RS15995 PF07690 Major Facilitator Superfamily ALX04_RS16010 PF00872 Transposase, Mutator family ALX04_RS16015 PF00486 Transcriptional regulatory protein, C terminal ALX04_RS16015 PF00072 Response regulator receiver domain ALX04_RS16020 PF02705 K+ potassium transporter ALX04_RS16030 PF00239 Resolvase, N terminal domain ALX04_RS16030 PF02796 Helix-turn-helix domain of resolvase ALX04_RS16045 PF07972 NrdI Flavodoxin like ALX04_RS16050 PF08343 Ribonucleotide reductase N-terminal ALX04_RS16050 PF02867 Ribonucleotide reductase, barrel domain ALX04_RS16050 PF00317 Ribonucleotide reductase, all-alpha domain ALX04_RS16055 PF00268 Ribonucleotide reductase, small chain ALX04_RS16060 PF00268 Ribonucleotide reductase, small chain ALX04_RS16070 PF02796 Helix-turn-helix domain of resolvase ALX04_RS16070 PF00239 Resolvase, N terminal domain