locus-tag class description CYG41_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CYG41_RS00005 PF00308 Bacterial dnaA protein CYG41_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CYG41_RS00010 PF02767 DNA polymerase III beta subunit, central domain CYG41_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CYG41_RS00020 PF02463 RecF/RecN/SMC N terminal domain CYG41_RS00025 PF01751 Toprim domain CYG41_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG41_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus CYG41_RS00025 PF00204 DNA gyrase B CYG41_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A CYG41_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller CYG41_RS00055 PF01791 DeoC/LacD family aldolase CYG41_RS00060 PF00436 Single-strand binding protein family CYG41_RS00065 PF01250 Ribosomal protein S6 CYG41_RS00070 PF00436 Single-strand binding protein family CYG41_RS00075 PF01084 Ribosomal protein S18 CYG41_RS00085 PF01965 DJ-1/PfpI family CYG41_RS00090 PF01654 Cytochrome bd terminal oxidase subunit I CYG41_RS00095 PF02322 Cytochrome bd terminal oxidase subunit II CYG41_RS00110 PF13936 Helix-turn-helix domain CYG41_RS00120 PF02517 CPBP intramembrane metalloprotease CYG41_RS00160 PF00005 ABC transporter CYG41_RS00165 PF00909 Ammonium Transporter Family CYG41_RS00185 PF12704 MacB-like periplasmic core domain CYG41_RS00185 PF00005 ABC transporter CYG41_RS00185 PF02687 FtsX-like permease family CYG41_RS00205 PF01925 Sulfite exporter TauE/SafE CYG41_RS00210 PF06736 Protein of unknown function (DUF1211) CYG41_RS00215 PF12464 Maltose acetyltransferase CYG41_RS00215 PF00132 Bacterial transferase hexapeptide (six repeats) CYG41_RS00230 PF03577 Peptidase family C69 CYG41_RS00265 PF08924 Domain of unknown function (DUF1906) CYG41_RS00265 PF01471 Putative peptidoglycan binding domain CYG41_RS00280 PF02837 Glycosyl hydrolases family 2, sugar binding domain CYG41_RS00280 PF00703 Glycosyl hydrolases family 2 CYG41_RS00280 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CYG41_RS00285 PF01468 GA module CYG41_RS00285 PF07564 Domain of Unknown Function (DUF1542) CYG41_RS00290 PF01081 KDPG and KHG aldolase CYG41_RS00295 PF00294 pfkB family carbohydrate kinase CYG41_RS00305 PF03786 D-mannonate dehydratase (UxuA) CYG41_RS00310 PF08125 Mannitol dehydrogenase C-terminal domain CYG41_RS00310 PF01232 Mannitol dehydrogenase Rossmann domain CYG41_RS00320 PF07729 FCD domain CYG41_RS00320 PF00392 Bacterial regulatory proteins, gntR family CYG41_RS00345 PF07690 Major Facilitator Superfamily CYG41_RS00350 PF07859 alpha/beta hydrolase fold CYG41_RS00365 PF03176 MMPL family CYG41_RS00370 PF17932 Tetracyclin repressor-like, C-terminal domain CYG41_RS00370 PF00440 Bacterial regulatory proteins, tetR family CYG41_RS00380 PF01979 Amidohydrolase family CYG41_RS00400 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS00405 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CYG41_RS00410 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS00415 PF00571 CBS domain CYG41_RS00415 PF00005 ABC transporter CYG41_RS00435 PF00403 Heavy-metal-associated domain CYG41_RS00440 PF00403 Heavy-metal-associated domain CYG41_RS00450 PF00027 Cyclic nucleotide-binding domain CYG41_RS00450 PF13545 Crp-like helix-turn-helix domain CYG41_RS00480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYG41_RS00480 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS00480 PF02378 Phosphotransferase system, EIIC CYG41_RS00485 PF07748 Glycosyl hydrolases family 38 C-terminal domain CYG41_RS00485 PF09261 Alpha mannosidase middle domain CYG41_RS00485 PF01074 Glycosyl hydrolases family 38 N-terminal domain CYG41_RS00495 PF00232 Glycosyl hydrolase family 1 CYG41_RS00500 PF00480 ROK family CYG41_RS00505 PF00290 Tryptophan synthase alpha chain CYG41_RS00510 PF00291 Pyridoxal-phosphate dependent enzyme CYG41_RS00515 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CYG41_RS00520 PF00218 Indole-3-glycerol phosphate synthase CYG41_RS00525 PF02885 Glycosyl transferase family, helical bundle domain CYG41_RS00525 PF00591 Glycosyl transferase family, a/b domain CYG41_RS00530 PF07690 Major Facilitator Superfamily CYG41_RS00560 PF01113 Dihydrodipicolinate reductase, N-terminus CYG41_RS00560 PF05173 Dihydrodipicolinate reductase, C-terminus CYG41_RS00565 PF00701 Dihydrodipicolinate synthetase family CYG41_RS00575 PF01546 Peptidase family M20/M25/M40 CYG41_RS00580 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CYG41_RS00580 PF14602 Hexapeptide repeat of succinyl-transferase CYG41_RS00580 PF00132 Bacterial transferase hexapeptide (six repeats) CYG41_RS00585 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CYG41_RS00585 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CYG41_RS00595 PF00696 Amino acid kinase family CYG41_RS00595 PF13840 ACT domain CYG41_RS00600 PF01678 Diaminopimelate epimerase CYG41_RS00605 PF01118 Semialdehyde dehydrogenase, NAD binding domain CYG41_RS00605 PF02774 Semialdehyde dehydrogenase, dimerisation domain CYG41_RS00615 PF01381 Helix-turn-helix CYG41_RS00620 PF00293 NUDIX domain CYG41_RS00635 PF02272 DHHA1 domain CYG41_RS00635 PF01368 DHH family CYG41_RS00640 PF03948 Ribosomal protein L9, C-terminal domain CYG41_RS00640 PF01281 Ribosomal protein L9, N-terminal domain CYG41_RS00645 PF00772 DnaB-like helicase N terminal domain CYG41_RS00645 PF03796 DnaB-like helicase C terminal domain CYG41_RS00655 PF02378 Phosphotransferase system, EIIC CYG41_RS00655 PF00367 phosphotransferase system, EIIB CYG41_RS00660 PF01380 SIS domain CYG41_RS00675 PF00440 Bacterial regulatory proteins, tetR family CYG41_RS00680 PF00005 ABC transporter CYG41_RS00680 PF02687 FtsX-like permease family CYG41_RS00680 PF12704 MacB-like periplasmic core domain CYG41_RS00695 PF00709 Adenylosuccinate synthetase CYG41_RS00710 PF01022 Bacterial regulatory protein, arsR family CYG41_RS00720 PF03477 ATP cone domain CYG41_RS00720 PF13597 Anaerobic ribonucleoside-triphosphate reductase CYG41_RS00755 PF06782 Uncharacterised protein family (UPF0236) CYG41_RS00760 PF02371 Transposase IS116/IS110/IS902 family CYG41_RS00760 PF01548 Transposase CYG41_RS00775 PF17676 LD-carboxypeptidase C-terminal domain CYG41_RS00775 PF02016 LD-carboxypeptidase N-terminal domain CYG41_RS00785 PF01820 D-ala D-ala ligase N-terminus CYG41_RS00785 PF07478 D-ala D-ala ligase C-terminus CYG41_RS00800 PF07690 Major Facilitator Superfamily CYG41_RS00815 PF00672 HAMP domain CYG41_RS00815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG41_RS00815 PF00512 His Kinase A (phospho-acceptor) domain CYG41_RS00820 PF00072 Response regulator receiver domain CYG41_RS00820 PF00486 Transcriptional regulatory protein, C terminal CYG41_RS00825 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CYG41_RS00825 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CYG41_RS00830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYG41_RS00830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYG41_RS00835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS00840 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CYG41_RS00850 PF02378 Phosphotransferase system, EIIC CYG41_RS00855 PF00232 Glycosyl hydrolase family 1 CYG41_RS00860 PF07702 UTRA domain CYG41_RS00860 PF00392 Bacterial regulatory proteins, gntR family CYG41_RS00875 PF07457 Protein of unknown function (DUF1516) CYG41_RS00880 PF00860 Permease family CYG41_RS00900 PF00005 ABC transporter CYG41_RS00905 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CYG41_RS00910 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS00915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYG41_RS00915 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG41_RS00920 PF04143 Sulphur transport CYG41_RS00930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYG41_RS00985 PF00004 ATPase family associated with various cellular activities (AAA) CYG41_RS00985 PF16193 AAA C-terminal domain CYG41_RS00985 PF12002 MgsA AAA+ ATPase C terminal CYG41_RS01000 PF00871 Acetokinase family CYG41_RS01005 PF00455 DeoR C terminal sensor domain CYG41_RS01005 PF08220 DeoR-like helix-turn-helix domain CYG41_RS01010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYG41_RS01010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYG41_RS01015 PF01116 Fructose-bisphosphate aldolase class-II CYG41_RS01020 PF03611 PTS system sugar-specific permease component CYG41_RS01030 PF00730 HhH-GPD superfamily base excision DNA repair protein CYG41_RS01030 PF10576 Iron-sulfur binding domain of endonuclease III CYG41_RS01030 PF00633 Helix-hairpin-helix motif CYG41_RS01035 PF07690 Major Facilitator Superfamily CYG41_RS01040 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase CYG41_RS01040 PF09364 XFP N-terminal domain CYG41_RS01040 PF09363 XFP C-terminal domain CYG41_RS01045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG41_RS01065 PF00005 ABC transporter CYG41_RS01085 PF00005 ABC transporter CYG41_RS01085 PF00664 ABC transporter transmembrane region CYG41_RS01090 PF01381 Helix-turn-helix CYG41_RS01100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYG41_RS01100 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG41_RS01150 PF00258 Flavodoxin CYG41_RS01165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYG41_RS01165 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYG41_RS01175 PF04226 Transglycosylase associated protein CYG41_RS01190 PF03780 Asp23 family, cell envelope-related function CYG41_RS01230 PF01470 Pyroglutamyl peptidase CYG41_RS01245 PF07685 CobB/CobQ-like glutamine amidotransferase domain CYG41_RS01260 PF02527 rRNA small subunit methyltransferase G CYG41_RS01265 PF02195 ParB-like nuclease domain CYG41_RS01265 PF17762 HTH domain found in ParB protein CYG41_RS01270 PF13614 AAA domain CYG41_RS01275 PF17762 HTH domain found in ParB protein CYG41_RS01275 PF02195 ParB-like nuclease domain CYG41_RS01280 PF06107 Bacterial protein of unknown function (DUF951) CYG41_RS01285 PF01926 50S ribosome-binding GTPase CYG41_RS01285 PF06071 Protein of unknown function (DUF933) CYG41_RS01295 PF00478 IMP dehydrogenase / GMP reductase domain CYG41_RS01295 PF00571 CBS domain CYG41_RS01310 PF00486 Transcriptional regulatory protein, C terminal CYG41_RS01310 PF00072 Response regulator receiver domain CYG41_RS01315 PF00512 His Kinase A (phospho-acceptor) domain CYG41_RS01315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG41_RS01320 PF07943 Penicillin-binding protein 5, C-terminal domain CYG41_RS01320 PF00768 D-alanyl-D-alanine carboxypeptidase CYG41_RS01330 PF03449 Transcription elongation factor, N-terminal CYG41_RS01330 PF01272 Transcription elongation factor, GreA/GreB, C-term CYG41_RS01335 PF08245 Mur ligase middle domain CYG41_RS01335 PF02875 Mur ligase family, glutamate ligase domain CYG41_RS01340 PF01177 Asp/Glu/Hydantoin racemase CYG41_RS01345 PF00248 Aldo/keto reductase family CYG41_RS01350 PF08220 DeoR-like helix-turn-helix domain CYG41_RS01350 PF00455 DeoR C terminal sensor domain CYG41_RS01355 PF00083 Sugar (and other) transporter CYG41_RS01365 PF00171 Aldehyde dehydrogenase family CYG41_RS01370 PF04962 KduI/IolB family CYG41_RS01375 PF00294 pfkB family carbohydrate kinase CYG41_RS01380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG41_RS01380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG41_RS01380 PF00205 Thiamine pyrophosphate enzyme, central domain CYG41_RS01385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYG41_RS01385 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CYG41_RS01390 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYG41_RS01390 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CYG41_RS01395 PF01261 Xylose isomerase-like TIM barrel CYG41_RS01400 PF01116 Fructose-bisphosphate aldolase class-II CYG41_RS01405 PF14552 Tautomerase enzyme CYG41_RS01415 PF01261 Xylose isomerase-like TIM barrel CYG41_RS01420 PF01418 Helix-turn-helix domain, rpiR family CYG41_RS01420 PF01380 SIS domain CYG41_RS01425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CYG41_RS01425 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CYG41_RS01430 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYG41_RS01430 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYG41_RS01440 PF02447 GntP family permease CYG41_RS01455 PF00535 Glycosyl transferase family 2 CYG41_RS01465 PF01943 Polysaccharide biosynthesis protein CYG41_RS01465 PF14667 Polysaccharide biosynthesis C-terminal domain CYG41_RS01480 PF00005 ABC transporter CYG41_RS01495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CYG41_RS01495 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CYG41_RS01500 PF01432 Peptidase family M3 CYG41_RS01500 PF08439 Oligopeptidase F CYG41_RS01505 PF03816 Cell envelope-related transcriptional attenuator domain CYG41_RS01510 PF05525 Branched-chain amino acid transport protein CYG41_RS01520 PF08220 DeoR-like helix-turn-helix domain CYG41_RS01520 PF00455 DeoR C terminal sensor domain CYG41_RS01525 PF00535 Glycosyl transferase family 2 CYG41_RS01540 PF10502 Signal peptidase, peptidase S26 CYG41_RS01550 PF12848 ABC transporter CYG41_RS01550 PF00005 ABC transporter CYG41_RS01575 PF00085 Thioredoxin CYG41_RS01585 PF12821 Threonine/Serine exporter, ThrE CYG41_RS01590 PF13458 Periplasmic binding protein CYG41_RS01595 PF02653 Branched-chain amino acid transport system / permease component CYG41_RS01600 PF11862 Domain of unknown function (DUF3382) CYG41_RS01600 PF02653 Branched-chain amino acid transport system / permease component CYG41_RS01605 PF12399 Branched-chain amino acid ATP-binding cassette transporter CYG41_RS01605 PF00005 ABC transporter CYG41_RS01610 PF00005 ABC transporter CYG41_RS01615 PF03819 MazG nucleotide pyrophosphohydrolase domain CYG41_RS01630 PF01791 DeoC/LacD family aldolase CYG41_RS01635 PF01676 Metalloenzyme superfamily CYG41_RS01640 PF01048 Phosphorylase superfamily CYG41_RS01645 PF00877 NlpC/P60 family CYG41_RS01650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYG41_RS01650 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG41_RS01670 PF13416 Bacterial extracellular solute-binding protein CYG41_RS01680 PF01238 Phosphomannose isomerase type I CYG41_RS01685 PF07702 UTRA domain CYG41_RS01685 PF00392 Bacterial regulatory proteins, gntR family CYG41_RS01690 PF01380 SIS domain CYG41_RS01695 PF01979 Amidohydrolase family CYG41_RS01705 PF01301 Glycosyl hydrolases family 35 CYG41_RS01710 PF03830 PTS system sorbose subfamily IIB component CYG41_RS01720 PF03613 PTS system mannose/fructose/sorbose family IID component CYG41_RS01725 PF03610 PTS system fructose IIA component CYG41_RS01725 PF03830 PTS system sorbose subfamily IIB component CYG41_RS01730 PF00294 pfkB family carbohydrate kinase CYG41_RS01735 PF00106 short chain dehydrogenase CYG41_RS01740 PF03611 PTS system sugar-specific permease component CYG41_RS01755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS01765 PF00534 Glycosyl transferases group 1 CYG41_RS01770 PF00534 Glycosyl transferases group 1 CYG41_RS01780 PF00155 Aminotransferase class I and II CYG41_RS01785 PF00557 Metallopeptidase family M24 CYG41_RS01785 PF01321 Creatinase/Prolidase N-terminal domain CYG41_RS01790 PF02378 Phosphotransferase system, EIIC CYG41_RS01795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS01800 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CYG41_RS01805 PF05343 M42 glutamyl aminopeptidase CYG41_RS01815 PF01546 Peptidase family M20/M25/M40 CYG41_RS01815 PF07687 Peptidase dimerisation domain CYG41_RS01820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG41_RS01830 PF00005 ABC transporter CYG41_RS01840 PF00005 ABC transporter CYG41_RS01850 PF03070 TENA/THI-4/PQQC family CYG41_RS01860 PF02110 Hydroxyethylthiazole kinase family CYG41_RS01865 PF02581 Thiamine monophosphate synthase CYG41_RS01870 PF08543 Phosphomethylpyrimidine kinase CYG41_RS01875 PF13520 Amino acid permease CYG41_RS01885 PF00356 Bacterial regulatory proteins, lacI family CYG41_RS01890 PF00294 pfkB family carbohydrate kinase CYG41_RS01895 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system CYG41_RS01950 PF00905 Penicillin binding protein transpeptidase domain CYG41_RS01950 PF03717 Penicillin-binding Protein dimerisation domain CYG41_RS01950 PF05223 NTF2-like N-terminal transpeptidase domain CYG41_RS01965 PF07690 Major Facilitator Superfamily CYG41_RS02005 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS02005 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYG41_RS02005 PF05043 Mga helix-turn-helix domain CYG41_RS02005 PF08279 HTH domain CYG41_RS02005 PF00874 PRD domain CYG41_RS02015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS02015 PF02378 Phosphotransferase system, EIIC CYG41_RS02015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYG41_RS02020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS02025 PF02378 Phosphotransferase system, EIIC CYG41_RS02025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS02030 PF00923 Transaldolase/Fructose-6-phosphate aldolase CYG41_RS02035 PF00834 Ribulose-phosphate 3 epimerase family CYG41_RS02040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYG41_RS02045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS02055 PF13936 Helix-turn-helix domain CYG41_RS02065 PF02779 Transketolase, pyrimidine binding domain CYG41_RS02065 PF02780 Transketolase, C-terminal domain CYG41_RS02065 PF00456 Transketolase, thiamine diphosphate binding domain CYG41_RS02070 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CYG41_RS02070 PF02780 Transketolase, C-terminal domain CYG41_RS02070 PF02779 Transketolase, pyrimidine binding domain CYG41_RS02075 PF00480 ROK family CYG41_RS02080 PF08220 DeoR-like helix-turn-helix domain CYG41_RS02080 PF00455 DeoR C terminal sensor domain CYG41_RS02085 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS02085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYG41_RS02090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS02095 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS02100 PF13936 Helix-turn-helix domain CYG41_RS02105 PF01116 Fructose-bisphosphate aldolase class-II CYG41_RS02110 PF01116 Fructose-bisphosphate aldolase class-II CYG41_RS02120 PF03610 PTS system fructose IIA component CYG41_RS02120 PF03830 PTS system sorbose subfamily IIB component CYG41_RS02130 PF03613 PTS system mannose/fructose/sorbose family IID component CYG41_RS02135 PF00923 Transaldolase/Fructose-6-phosphate aldolase CYG41_RS02140 PF00356 Bacterial regulatory proteins, lacI family CYG41_RS02145 PF14502 Helix-turn-helix domain CYG41_RS02145 PF14503 YhfZ C-terminal domain CYG41_RS02155 PF10941 Protein of unknown function DUF2620 CYG41_RS02160 PF10797 Protein of unknown function CYG41_RS02165 PF02126 Phosphotriesterase family CYG41_RS02170 PF00155 Aminotransferase class I and II CYG41_RS02175 PF01168 Alanine racemase, N-terminal domain CYG41_RS02180 PF01676 Metalloenzyme superfamily CYG41_RS02190 PF07155 ECF-type riboflavin transporter, S component CYG41_RS02195 PF12558 ATP-binding cassette cobalt transporter CYG41_RS02195 PF00005 ABC transporter CYG41_RS02200 PF02361 Cobalt transport protein CYG41_RS02205 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CYG41_RS02205 PF13378 Enolase C-terminal domain-like CYG41_RS02210 PF01915 Glycosyl hydrolase family 3 C-terminal domain CYG41_RS02210 PF00933 Glycosyl hydrolase family 3 N terminal domain CYG41_RS02230 PF00239 Resolvase, N terminal domain CYG41_RS02230 PF02796 Helix-turn-helix domain of resolvase CYG41_RS02275 PF13936 Helix-turn-helix domain CYG41_RS02290 PF13361 UvrD-like helicase C-terminal domain CYG41_RS02290 PF00580 UvrD/REP helicase N-terminal domain CYG41_RS02310 PF00665 Integrase core domain CYG41_RS02310 PF13276 HTH-like domain CYG41_RS02310 PF13333 Integrase core domain CYG41_RS02315 PF00665 Integrase core domain CYG41_RS02315 PF13276 HTH-like domain CYG41_RS02315 PF13333 Integrase core domain CYG41_RS02335 PF00689 Cation transporting ATPase, C-terminus CYG41_RS02335 PF00690 Cation transporter/ATPase, N-terminus CYG41_RS02345 PF00999 Sodium/hydrogen exchanger family CYG41_RS02355 PF13610 DDE domain CYG41_RS02370 PF00654 Voltage gated chloride channel CYG41_RS02380 PF07690 Major Facilitator Superfamily CYG41_RS02390 PF07687 Peptidase dimerisation domain CYG41_RS02390 PF01546 Peptidase family M20/M25/M40 CYG41_RS02400 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CYG41_RS02400 PF00703 Glycosyl hydrolases family 2 CYG41_RS02400 PF16353 Domain of unknown function(DUF4981) CYG41_RS02400 PF02929 Beta galactosidase small chain CYG41_RS02400 PF02837 Glycosyl hydrolases family 2, sugar binding domain CYG41_RS02405 PF13520 Amino acid permease CYG41_RS02410 PF00324 Amino acid permease CYG41_RS02415 PF02311 AraC-like ligand binding domain CYG41_RS02415 PF12833 Helix-turn-helix domain CYG41_RS02420 PF12833 Helix-turn-helix domain CYG41_RS02425 PF07690 Major Facilitator Superfamily CYG41_RS02430 PF01546 Peptidase family M20/M25/M40 CYG41_RS02440 PF00005 ABC transporter CYG41_RS02445 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG41_RS02450 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS02455 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS02480 PF05257 CHAP domain CYG41_RS02480 PF01476 LysM domain CYG41_RS02500 PF00005 ABC transporter CYG41_RS02505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYG41_RS02505 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG41_RS02545 PF03180 NLPA lipoprotein CYG41_RS02550 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CYG41_RS02560 PF06100 MCRA family CYG41_RS02575 PF03610 PTS system fructose IIA component CYG41_RS02580 PF02734 DAK2 domain CYG41_RS02585 PF02733 Dak1 domain CYG41_RS02595 PF00005 ABC transporter CYG41_RS02665 PF07690 Major Facilitator Superfamily CYG41_RS02680 PF01116 Fructose-bisphosphate aldolase class-II CYG41_RS02685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG41_RS02685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG41_RS02685 PF00205 Thiamine pyrophosphate enzyme, central domain CYG41_RS02705 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CYG41_RS02705 PF13378 Enolase C-terminal domain-like CYG41_RS02710 PF08003 Protein of unknown function (DUF1698) CYG41_RS02720 PF07722 Peptidase C26 CYG41_RS02730 PF03951 Glutamine synthetase, beta-Grasp domain CYG41_RS02730 PF00120 Glutamine synthetase, catalytic domain CYG41_RS02740 PF00324 Amino acid permease CYG41_RS02745 PF13411 MerR HTH family regulatory protein CYG41_RS02750 PF00248 Aldo/keto reductase family CYG41_RS02760 PF00107 Zinc-binding dehydrogenase CYG41_RS02760 PF08240 Alcohol dehydrogenase GroES-like domain CYG41_RS02765 PF01638 HxlR-like helix-turn-helix CYG41_RS02780 PF00005 ABC transporter CYG41_RS02790 PF00486 Transcriptional regulatory protein, C terminal CYG41_RS02790 PF00072 Response regulator receiver domain CYG41_RS02795 PF00512 His Kinase A (phospho-acceptor) domain CYG41_RS02795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG41_RS02800 PF00005 ABC transporter CYG41_RS02820 PF11838 ERAP1-like C-terminal domain CYG41_RS02820 PF01433 Peptidase family M1 domain CYG41_RS02825 PF13520 Amino acid permease CYG41_RS02845 PF03466 LysR substrate binding domain CYG41_RS02845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG41_RS02865 PF08501 Shikimate dehydrogenase substrate binding domain CYG41_RS02865 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CYG41_RS02870 PF07690 Major Facilitator Superfamily CYG41_RS02875 PF08501 Shikimate dehydrogenase substrate binding domain CYG41_RS02875 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CYG41_RS02880 PF04204 Homoserine O-succinyltransferase CYG41_RS02885 PF00291 Pyridoxal-phosphate dependent enzyme CYG41_RS02905 PF01053 Cys/Met metabolism PLP-dependent enzyme CYG41_RS02910 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG41_RS02915 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS02925 PF05525 Branched-chain amino acid transport protein CYG41_RS02995 PF00892 EamA-like transporter family CYG41_RS03000 PF06782 Uncharacterised protein family (UPF0236) CYG41_RS03010 PF00005 ABC transporter CYG41_RS03035 PF02219 Methylenetetrahydrofolate reductase CYG41_RS03040 PF08267 Cobalamin-independent synthase, N-terminal domain CYG41_RS03040 PF01717 Cobalamin-independent synthase, Catalytic domain CYG41_RS03050 PF00005 ABC transporter CYG41_RS03050 PF00664 ABC transporter transmembrane region CYG41_RS03055 PF00005 ABC transporter CYG41_RS03055 PF00664 ABC transporter transmembrane region CYG41_RS03060 PF07690 Major Facilitator Superfamily CYG41_RS03065 PF00392 Bacterial regulatory proteins, gntR family CYG41_RS03065 PF07702 UTRA domain CYG41_RS03070 PF00128 Alpha amylase, catalytic domain CYG41_RS03070 PF16657 Maltogenic Amylase, C-terminal domain CYG41_RS03075 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CYG41_RS03075 PF02378 Phosphotransferase system, EIIC CYG41_RS03075 PF00367 phosphotransferase system, EIIB CYG41_RS03080 PF00375 Sodium:dicarboxylate symporter family CYG41_RS03085 PF13520 Amino acid permease CYG41_RS03090 PF00056 lactate/malate dehydrogenase, NAD binding domain CYG41_RS03090 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CYG41_RS03095 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CYG41_RS03095 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CYG41_RS03100 PF00313 'Cold-shock' DNA-binding domain CYG41_RS03120 PF00005 ABC transporter CYG41_RS03120 PF12848 ABC transporter CYG41_RS03135 PF00248 Aldo/keto reductase family CYG41_RS03140 PF00324 Amino acid permease CYG41_RS03150 PF00999 Sodium/hydrogen exchanger family CYG41_RS03170 PF00005 ABC transporter CYG41_RS03180 PF00194 Eukaryotic-type carbonic anhydrase CYG41_RS03185 PF01906 Putative heavy-metal-binding CYG41_RS03195 PF00293 NUDIX domain CYG41_RS03195 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CYG41_RS03195 PF09297 NADH pyrophosphatase zinc ribbon domain CYG41_RS03200 PF00072 Response regulator receiver domain CYG41_RS03200 PF00486 Transcriptional regulatory protein, C terminal CYG41_RS03205 PF00512 His Kinase A (phospho-acceptor) domain CYG41_RS03205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG41_RS03210 PF00005 ABC transporter CYG41_RS03220 PF08240 Alcohol dehydrogenase GroES-like domain CYG41_RS03220 PF00107 Zinc-binding dehydrogenase CYG41_RS03225 PF00909 Ammonium Transporter Family CYG41_RS03235 PF02308 MgtC family CYG41_RS03255 PF00005 ABC transporter CYG41_RS03255 PF12848 ABC transporter CYG41_RS03265 PF03167 Uracil DNA glycosylase superfamily CYG41_RS03270 PF00230 Major intrinsic protein CYG41_RS03275 PF01266 FAD dependent oxidoreductase CYG41_RS03275 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CYG41_RS03280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYG41_RS03280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYG41_RS03285 PF00535 Glycosyl transferase family 2 CYG41_RS03305 PF00874 PRD domain CYG41_RS03305 PF03123 CAT RNA binding domain CYG41_RS03310 PF00874 PRD domain CYG41_RS03310 PF03123 CAT RNA binding domain CYG41_RS03315 PF02378 Phosphotransferase system, EIIC CYG41_RS03315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS03325 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CYG41_RS03330 PF08544 GHMP kinases C terminal CYG41_RS03330 PF10509 Galactokinase galactose-binding signature CYG41_RS03330 PF00288 GHMP kinases N terminal domain CYG41_RS03335 PF16363 GDP-mannose 4,6 dehydratase CYG41_RS03340 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CYG41_RS03340 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CYG41_RS03345 PF00356 Bacterial regulatory proteins, lacI family CYG41_RS03350 PF01263 Aldose 1-epimerase CYG41_RS03360 PF03611 PTS system sugar-specific permease component CYG41_RS03385 PF00294 pfkB family carbohydrate kinase CYG41_RS03390 PF01791 DeoC/LacD family aldolase CYG41_RS03395 PF02502 Ribose/Galactose Isomerase CYG41_RS03400 PF02502 Ribose/Galactose Isomerase CYG41_RS03405 PF08220 DeoR-like helix-turn-helix domain CYG41_RS03405 PF00455 DeoR C terminal sensor domain CYG41_RS03420 PF12320 Type 5 capsule protein repressor C-terminal domain CYG41_RS03420 PF00149 Calcineurin-like phosphoesterase CYG41_RS03425 PF13476 AAA domain CYG41_RS03440 PF00011 Hsp20/alpha crystallin family CYG41_RS03445 PF14815 NUDIX domain CYG41_RS03445 PF00730 HhH-GPD superfamily base excision DNA repair protein CYG41_RS03455 PF02525 Flavodoxin-like fold CYG41_RS03470 PF08543 Phosphomethylpyrimidine kinase CYG41_RS03485 PF13460 NAD(P)H-binding CYG41_RS03490 PF14310 Fibronectin type III-like domain CYG41_RS03490 PF00933 Glycosyl hydrolase family 3 N terminal domain CYG41_RS03490 PF01915 Glycosyl hydrolase family 3 C-terminal domain CYG41_RS03515 PF02653 Branched-chain amino acid transport system / permease component CYG41_RS03520 PF00005 ABC transporter CYG41_RS03525 PF00107 Zinc-binding dehydrogenase CYG41_RS03525 PF08240 Alcohol dehydrogenase GroES-like domain CYG41_RS03535 PF00690 Cation transporter/ATPase, N-terminus CYG41_RS03535 PF00689 Cation transporting ATPase, C-terminus CYG41_RS03545 PF00535 Glycosyl transferase family 2 CYG41_RS03550 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase CYG41_RS03565 PF00486 Transcriptional regulatory protein, C terminal CYG41_RS03565 PF00072 Response regulator receiver domain CYG41_RS03570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG41_RS03570 PF00512 His Kinase A (phospho-acceptor) domain CYG41_RS03580 PF17853 GGDEF-like domain CYG41_RS03580 PF07905 Purine catabolism regulatory protein-like family CYG41_RS03580 PF13556 PucR C-terminal helix-turn-helix domain CYG41_RS03590 PF06314 Acetoacetate decarboxylase (ADC) CYG41_RS03595 PF00881 Nitroreductase family CYG41_RS03600 PF01070 FMN-dependent dehydrogenase CYG41_RS03635 PF08240 Alcohol dehydrogenase GroES-like domain CYG41_RS03635 PF00107 Zinc-binding dehydrogenase CYG41_RS03650 PF01594 AI-2E family transporter CYG41_RS03665 PF01726 LexA DNA binding domain CYG41_RS03665 PF00717 Peptidase S24-like CYG41_RS03680 PF01613 Flavin reductase like domain CYG41_RS03690 PF01812 5-formyltetrahydrofolate cyclo-ligase family CYG41_RS03695 PF04343 Protein of unknown function, DUF488 CYG41_RS03715 PF00390 Malic enzyme, N-terminal domain CYG41_RS03715 PF03949 Malic enzyme, NAD binding domain CYG41_RS03725 PF08534 Redoxin CYG41_RS03740 PF00664 ABC transporter transmembrane region CYG41_RS03740 PF00005 ABC transporter CYG41_RS03750 PF00334 Nucleoside diphosphate kinase CYG41_RS03765 PF00561 alpha/beta hydrolase fold CYG41_RS03785 PF00999 Sodium/hydrogen exchanger family CYG41_RS03800 PF00561 alpha/beta hydrolase fold CYG41_RS03805 PF07972 NrdI Flavodoxin like CYG41_RS03810 PF00248 Aldo/keto reductase family CYG41_RS03835 PF01717 Cobalamin-independent synthase, Catalytic domain CYG41_RS03840 PF02664 S-Ribosylhomocysteinase (LuxS) CYG41_RS03850 PF07499 RuvA, C-terminal domain CYG41_RS03850 PF01330 RuvA N terminal domain CYG41_RS03855 PF17864 RuvB AAA lid domain CYG41_RS03855 PF05496 Holliday junction DNA helicase RuvB P-loop domain CYG41_RS03855 PF05491 RuvB C-terminal winged helix domain CYG41_RS03860 PF02547 Queuosine biosynthesis protein CYG41_RS03865 PF01702 Queuine tRNA-ribosyltransferase CYG41_RS03870 PF02699 Preprotein translocase subunit CYG41_RS03875 PF00465 Iron-containing alcohol dehydrogenase CYG41_RS03875 PF00171 Aldehyde dehydrogenase family CYG41_RS03885 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CYG41_RS03885 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CYG41_RS03890 PF11799 impB/mucB/samB family C-terminal domain CYG41_RS03890 PF00817 impB/mucB/samB family CYG41_RS03900 PF00571 CBS domain CYG41_RS03900 PF00392 Bacterial regulatory proteins, gntR family CYG41_RS03900 PF07085 DRTGG domain CYG41_RS03900 PF03061 Thioesterase superfamily CYG41_RS03905 PF01368 DHH family CYG41_RS03905 PF02272 DHHA1 domain CYG41_RS03910 PF00270 DEAD/DEAH box helicase CYG41_RS03910 PF00271 Helicase conserved C-terminal domain CYG41_RS03930 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CYG41_RS03930 PF01411 tRNA synthetases class II (A) CYG41_RS03930 PF02272 DHHA1 domain CYG41_RS03940 PF06135 IreB regulatory phosphoprotein CYG41_RS03945 PF03652 Holliday junction resolvase CYG41_RS03950 PF06949 Protein of unknown function (DUF1292) CYG41_RS03965 PF01713 Smr domain CYG41_RS03965 PF00488 MutS domain V CYG41_RS03970 PF00085 Thioredoxin CYG41_RS03980 PF13193 AMP-binding enzyme C-terminal domain CYG41_RS03980 PF00501 AMP-binding enzyme CYG41_RS03985 PF03062 MBOAT, membrane-bound O-acyltransferase family CYG41_RS03990 PF00550 Phosphopantetheine attachment site CYG41_RS03995 PF04914 DltD protein CYG41_RS04000 PF10702 Protein of unknown function (DUF2507) CYG41_RS04005 PF01177 Asp/Glu/Hydantoin racemase CYG41_RS04015 PF00230 Major intrinsic protein CYG41_RS04030 PF00924 Mechanosensitive ion channel CYG41_RS04060 PF02829 3H domain CYG41_RS04060 PF08279 HTH domain CYG41_RS04065 PF01321 Creatinase/Prolidase N-terminal domain CYG41_RS04065 PF00557 Metallopeptidase family M24 CYG41_RS04070 PF00356 Bacterial regulatory proteins, lacI family CYG41_RS04075 PF00905 Penicillin binding protein transpeptidase domain CYG41_RS04075 PF00912 Transglycosylase CYG41_RS04085 PF13419 Haloacid dehalogenase-like hydrolase CYG41_RS04095 PF01546 Peptidase family M20/M25/M40 CYG41_RS04100 PF03009 Glycerophosphoryl diester phosphodiesterase family CYG41_RS04125 PF02872 5'-nucleotidase, C-terminal domain CYG41_RS04130 PF06265 Protein of unknown function (DUF1027) CYG41_RS04135 PF13344 Haloacid dehalogenase-like hydrolase CYG41_RS04145 PF09335 SNARE associated Golgi protein CYG41_RS04150 PF04608 Phosphatidylglycerophosphatase A CYG41_RS04155 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG41_RS04160 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CYG41_RS04165 PF00575 S1 RNA binding domain CYG41_RS04315 PF13520 Amino acid permease CYG41_RS04320 PF13439 Glycosyltransferase Family 4 CYG41_RS04320 PF00534 Glycosyl transferases group 1 CYG41_RS04325 PF13439 Glycosyltransferase Family 4 CYG41_RS04325 PF00534 Glycosyl transferases group 1 CYG41_RS04335 PF00155 Aminotransferase class I and II CYG41_RS04345 PF00884 Sulfatase CYG41_RS04350 PF01475 Ferric uptake regulator family CYG41_RS04390 PF02773 S-adenosylmethionine synthetase, C-terminal domain CYG41_RS04390 PF02772 S-adenosylmethionine synthetase, central domain CYG41_RS04390 PF00438 S-adenosylmethionine synthetase, N-terminal domain CYG41_RS04395 PF07690 Major Facilitator Superfamily CYG41_RS04405 PF07690 Major Facilitator Superfamily CYG41_RS04415 PF01569 PAP2 superfamily CYG41_RS04420 PF09334 tRNA synthetases class I (M) CYG41_RS04420 PF13603 Leucyl-tRNA synthetase, Domain 2 CYG41_RS04420 PF00133 tRNA synthetases class I (I, L, M and V) CYG41_RS04420 PF08264 Anticodon-binding domain of tRNA CYG41_RS04430 PF01943 Polysaccharide biosynthesis protein CYG41_RS04430 PF14667 Polysaccharide biosynthesis C-terminal domain CYG41_RS04435 PF01479 S4 domain CYG41_RS04435 PF00849 RNA pseudouridylate synthase CYG41_RS04445 PF01256 Carbohydrate kinase CYG41_RS04460 PF00255 Glutathione peroxidase CYG41_RS04465 PF00155 Aminotransferase class I and II CYG41_RS04490 PF05167 Uncharacterised ACR (DUF711) CYG41_RS04510 PF04607 Region found in RelA / SpoT proteins CYG41_RS04515 PF01513 ATP-NAD kinase CYG41_RS04520 PF00849 RNA pseudouridylate synthase CYG41_RS04520 PF01479 S4 domain CYG41_RS04525 PF02424 ApbE family CYG41_RS04530 PF03932 CutC family CYG41_RS04535 PF02673 Bacitracin resistance protein BacA CYG41_RS04540 PF10282 Lactonase, 7-bladed beta-propeller CYG41_RS04550 PF00253 Ribosomal protein S14p/S29e CYG41_RS04555 PF00478 IMP dehydrogenase / GMP reductase domain CYG41_RS04575 PF00588 SpoU rRNA Methylase family CYG41_RS04595 PF09397 Ftsk gamma domain CYG41_RS04595 PF17854 FtsK alpha domain CYG41_RS04595 PF01580 FtsK/SpoIIIE family CYG41_RS04600 PF05193 Peptidase M16 inactive domain CYG41_RS04605 PF05193 Peptidase M16 inactive domain CYG41_RS04605 PF00675 Insulinase (Peptidase family M16) CYG41_RS04615 PF13464 Domain of unknown function (DUF4115) CYG41_RS04620 PF01066 CDP-alcohol phosphatidyltransferase CYG41_RS04625 PF02464 Competence-damaged protein CYG41_RS04625 PF18146 Damage-inducible protein CinA KH domain CYG41_RS04625 PF00994 Probable molybdopterin binding domain CYG41_RS04630 PF00154 recA bacterial DNA recombination protein CYG41_RS04640 PF00013 KH domain CYG41_RS04640 PF12072 Domain of unknown function (DUF3552) CYG41_RS04640 PF01966 HD domain CYG41_RS04645 PF01205 Uncharacterized protein family UPF0029 CYG41_RS04645 PF09186 Domain of unknown function (DUF1949) CYG41_RS04650 PF00271 Helicase conserved C-terminal domain CYG41_RS04650 PF04851 Type III restriction enzyme, res subunit CYG41_RS04660 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CYG41_RS04660 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CYG41_RS04675 PF07516 SecA Wing and Scaffold domain CYG41_RS04675 PF01043 SecA preprotein cross-linking domain CYG41_RS04675 PF07517 SecA DEAD-like domain CYG41_RS04685 PF00005 ABC transporter CYG41_RS04690 PF18075 FtsX extracellular domain CYG41_RS04690 PF02687 FtsX-like permease family CYG41_RS04695 PF17820 PDZ domain CYG41_RS04700 PF00072 Response regulator receiver domain CYG41_RS04700 PF00486 Transcriptional regulatory protein, C terminal CYG41_RS04705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG41_RS04705 PF00512 His Kinase A (phospho-acceptor) domain CYG41_RS04705 PF00989 PAS fold CYG41_RS04705 PF16736 Single Cache-like CYG41_RS04710 PF12849 PBP superfamily domain CYG41_RS04715 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS04720 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS04725 PF00005 ABC transporter CYG41_RS04730 PF00005 ABC transporter CYG41_RS04735 PF01895 PhoU domain CYG41_RS04740 PF00665 Integrase core domain CYG41_RS04740 PF13333 Integrase core domain CYG41_RS04740 PF13276 HTH-like domain CYG41_RS04760 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CYG41_RS04765 PF07475 HPr Serine kinase C-terminal domain CYG41_RS04765 PF02603 HPr Serine kinase N terminus CYG41_RS04770 PF01790 Prolipoprotein diacylglyceryl transferase CYG41_RS04775 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CYG41_RS04775 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CYG41_RS04780 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG41_RS04785 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYG41_RS04785 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYG41_RS04785 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYG41_RS04785 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CYG41_RS04795 PF17757 UvrB interaction domain CYG41_RS04795 PF12344 Ultra-violet resistance protein B CYG41_RS04795 PF02151 UvrB/uvrC motif CYG41_RS04795 PF04851 Type III restriction enzyme, res subunit CYG41_RS04795 PF00271 Helicase conserved C-terminal domain CYG41_RS04800 PF17760 UvrA interaction domain CYG41_RS04800 PF17755 UvrA DNA-binding domain CYG41_RS04800 PF00005 ABC transporter CYG41_RS04825 PF03668 P-loop ATPase protein family CYG41_RS04830 PF01933 Uncharacterised protein family UPF0052 CYG41_RS04835 PF10298 WhiA N-terminal LAGLIDADG-like domain CYG41_RS04835 PF14527 WhiA LAGLIDADG-like domain CYG41_RS04835 PF02650 WhiA C-terminal HTH domain CYG41_RS04840 PF01047 MarR family CYG41_RS04845 PF00574 Clp protease CYG41_RS04855 PF04198 Putative sugar-binding domain CYG41_RS04860 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CYG41_RS04860 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CYG41_RS04865 PF00162 Phosphoglycerate kinase CYG41_RS04870 PF00121 Triosephosphate isomerase CYG41_RS04875 PF03952 Enolase, N-terminal domain CYG41_RS04875 PF00113 Enolase, C-terminal TIM barrel domain CYG41_RS04890 PF00654 Voltage gated chloride channel CYG41_RS04900 PF03840 Preprotein translocase SecG subunit CYG41_RS04910 PF00773 RNB domain CYG41_RS04910 PF08206 Ribonuclease B OB domain CYG41_RS04910 PF17876 Cold shock domain CYG41_RS04910 PF00575 S1 RNA binding domain CYG41_RS04915 PF01668 SmpB protein CYG41_RS04920 PF00128 Alpha amylase, catalytic domain CYG41_RS04920 PF02903 Alpha amylase, N-terminal ig-like domain CYG41_RS04925 PF03636 Glycosyl hydrolase family 65, N-terminal domain CYG41_RS04925 PF03632 Glycosyl hydrolase family 65 central catalytic domain CYG41_RS04925 PF03633 Glycosyl hydrolase family 65, C-terminal domain CYG41_RS04930 PF13419 Haloacid dehalogenase-like hydrolase CYG41_RS04950 PF06782 Uncharacterised protein family (UPF0236) CYG41_RS04960 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS04965 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS04970 PF00005 ABC transporter CYG41_RS04970 PF08402 TOBE domain CYG41_RS04990 PF03167 Uracil DNA glycosylase superfamily CYG41_RS04995 PF01515 Phosphate acetyl/butaryl transferase CYG41_RS05000 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CYG41_RS05005 PF13732 Domain of unknown function (DUF4162) CYG41_RS05005 PF00005 ABC transporter CYG41_RS05015 PF00929 Exonuclease CYG41_RS05020 PF03372 Endonuclease/Exonuclease/phosphatase family CYG41_RS05025 PF06782 Uncharacterised protein family (UPF0236) CYG41_RS05030 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CYG41_RS05030 PF01565 FAD binding domain CYG41_RS05035 PF00999 Sodium/hydrogen exchanger family CYG41_RS05040 PF09856 Predicted transcriptional regulator (DUF2083) CYG41_RS05040 PF06114 IrrE N-terminal-like domain CYG41_RS05040 PF01381 Helix-turn-helix CYG41_RS05045 PF00005 ABC transporter CYG41_RS05045 PF08402 TOBE domain CYG41_RS05050 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS05055 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS05060 PF13416 Bacterial extracellular solute-binding protein CYG41_RS05080 PF00690 Cation transporter/ATPase, N-terminus CYG41_RS05080 PF00689 Cation transporting ATPase, C-terminus CYG41_RS05085 PF00440 Bacterial regulatory proteins, tetR family CYG41_RS05085 PF16295 Tetracyclin repressor-like, C-terminal domain CYG41_RS05095 PF00005 ABC transporter CYG41_RS05100 PF02457 DisA bacterial checkpoint controller nucleotide-binding CYG41_RS05110 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CYG41_RS05110 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CYG41_RS05110 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CYG41_RS05110 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CYG41_RS05120 PF01380 SIS domain CYG41_RS05135 PF01709 Transcriptional regulator CYG41_RS05140 PF00437 Type II/IV secretion system protein CYG41_RS05145 PF00482 Type II secretion system (T2SS), protein F CYG41_RS05180 PF02384 N-6 DNA Methylase CYG41_RS05190 PF00324 Amino acid permease CYG41_RS05215 PF16875 Glycosyl hydrolase family 36 N-terminal domain CYG41_RS05215 PF16874 Glycosyl hydrolase family 36 C-terminal domain CYG41_RS05230 PF00072 Response regulator receiver domain CYG41_RS05230 PF00486 Transcriptional regulatory protein, C terminal CYG41_RS05235 PF00512 His Kinase A (phospho-acceptor) domain CYG41_RS05235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG41_RS05235 PF00672 HAMP domain CYG41_RS05265 PF11798 IMS family HHH motif CYG41_RS05265 PF11799 impB/mucB/samB family C-terminal domain CYG41_RS05265 PF00817 impB/mucB/samB family CYG41_RS05300 PF00580 UvrD/REP helicase N-terminal domain CYG41_RS05300 PF13361 UvrD-like helicase C-terminal domain CYG41_RS05305 PF12826 Helix-hairpin-helix motif CYG41_RS05305 PF00533 BRCA1 C Terminus (BRCT) domain CYG41_RS05305 PF01653 NAD-dependent DNA ligase adenylation domain CYG41_RS05305 PF03120 NAD-dependent DNA ligase OB-fold domain CYG41_RS05305 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CYG41_RS05315 PF02686 Glu-tRNAGln amidotransferase C subunit CYG41_RS05320 PF01425 Amidase CYG41_RS05325 PF02934 GatB/GatE catalytic domain CYG41_RS05325 PF02637 GatB domain CYG41_RS05330 PF00781 Diacylglycerol kinase catalytic domain CYG41_RS05335 PF01938 TRAM domain CYG41_RS05335 PF05958 tRNA (Uracil-5-)-methyltransferase CYG41_RS05340 PF18273 Type III R-M EcoP15I C-terminal domain CYG41_RS05340 PF01555 DNA methylase CYG41_RS05345 PF08774 VRR-NUC domain CYG41_RS05345 PF04851 Type III restriction enzyme, res subunit CYG41_RS05355 PF07690 Major Facilitator Superfamily CYG41_RS05365 PF03976 Polyphosphate kinase 2 (PPK2) CYG41_RS05370 PF05649 Peptidase family M13 CYG41_RS05370 PF01431 Peptidase family M13 CYG41_RS05380 PF02645 Uncharacterised protein, DegV family COG1307 CYG41_RS05385 PF01145 SPFH domain / Band 7 family CYG41_RS05425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYG41_RS05430 PF00270 DEAD/DEAH box helicase CYG41_RS05430 PF00271 Helicase conserved C-terminal domain CYG41_RS05435 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CYG41_RS05460 PF09382 RQC domain CYG41_RS05460 PF16124 RecQ zinc-binding CYG41_RS05460 PF00270 DEAD/DEAH box helicase CYG41_RS05460 PF00570 HRDC domain CYG41_RS05460 PF00271 Helicase conserved C-terminal domain CYG41_RS05470 PF02073 Thermophilic metalloprotease (M29) CYG41_RS05490 PF03631 Virulence factor BrkB CYG41_RS05495 PF00258 Flavodoxin CYG41_RS05505 PF00557 Metallopeptidase family M24 CYG41_RS05510 PF00535 Glycosyl transferase family 2 CYG41_RS05530 PF08544 GHMP kinases C terminal CYG41_RS05530 PF00288 GHMP kinases N terminal domain CYG41_RS05535 PF00483 Nucleotidyl transferase CYG41_RS05545 PF00232 Glycosyl hydrolase family 1 CYG41_RS05550 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CYG41_RS05550 PF00367 phosphotransferase system, EIIB CYG41_RS05550 PF02378 Phosphotransferase system, EIIC CYG41_RS05555 PF09586 Bacterial membrane protein YfhO CYG41_RS05570 PF00535 Glycosyl transferase family 2 CYG41_RS05580 PF11728 Putative aromatic acid exporter C-terminal domain CYG41_RS05580 PF06081 Aromatic acid exporter family member 1 CYG41_RS05585 PF00313 'Cold-shock' DNA-binding domain CYG41_RS05600 PF13457 GW (Gly-Tryp) dipeptide domain CYG41_RS05600 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CYG41_RS05605 PF00156 Phosphoribosyl transferase domain CYG41_RS05610 PF00860 Permease family CYG41_RS05615 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CYG41_RS05615 PF02222 ATP-grasp domain CYG41_RS05615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYG41_RS05620 PF10397 Adenylosuccinate lyase C-terminus CYG41_RS05620 PF00206 Lyase CYG41_RS05635 PF00884 Sulfatase CYG41_RS05650 PF06800 Sugar transport protein CYG41_RS05655 PF00342 Phosphoglucose isomerase CYG41_RS05660 PF00589 Phage integrase family CYG41_RS05660 PF14659 Phage integrase, N-terminal SAM-like domain CYG41_RS05705 PF01381 Helix-turn-helix CYG41_RS05760 PF00436 Single-strand binding protein family CYG41_RS05785 PF05866 Endodeoxyribonuclease RusA CYG41_RS05960 PF05257 CHAP domain CYG41_RS05960 PF01476 LysM domain CYG41_RS05985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CYG41_RS05990 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CYG41_RS06040 PF03577 Peptidase family C69 CYG41_RS06060 PF00300 Histidine phosphatase superfamily (branch 1) CYG41_RS06070 PF00664 ABC transporter transmembrane region CYG41_RS06070 PF00005 ABC transporter CYG41_RS06075 PF00664 ABC transporter transmembrane region CYG41_RS06075 PF00005 ABC transporter CYG41_RS06085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYG41_RS06090 PF00144 Beta-lactamase CYG41_RS06095 PF08353 Domain of unknown function (DUF1727) CYG41_RS06095 PF08245 Mur ligase middle domain CYG41_RS06100 PF00265 Thymidine kinase CYG41_RS06110 PF00472 RF-1 domain CYG41_RS06110 PF03462 PCRF domain CYG41_RS06115 PF17827 PrmC N-terminal domain CYG41_RS06115 PF05175 Methyltransferase small domain CYG41_RS06120 PF01300 Telomere recombination CYG41_RS06120 PF03481 Putative GTP-binding controlling metal-binding CYG41_RS06130 PF00464 Serine hydroxymethyltransferase CYG41_RS06140 PF00119 ATP synthase A chain CYG41_RS06145 PF00137 ATP synthase subunit C CYG41_RS06150 PF00430 ATP synthase B/B' CF(0) CYG41_RS06155 PF00213 ATP synthase delta (OSCP) subunit CYG41_RS06160 PF00306 ATP synthase alpha/beta chain, C terminal domain CYG41_RS06160 PF02874 ATP synthase alpha/beta family, beta-barrel domain CYG41_RS06160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYG41_RS06165 PF00231 ATP synthase CYG41_RS06180 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CYG41_RS06180 PF02874 ATP synthase alpha/beta family, beta-barrel domain CYG41_RS06185 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CYG41_RS06185 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CYG41_RS06220 PF01809 Putative membrane protein insertion efficiency factor CYG41_RS06230 PF01098 Cell cycle protein CYG41_RS06235 PF01597 Glycine cleavage H-protein CYG41_RS06240 PF01546 Peptidase family M20/M25/M40 CYG41_RS06240 PF07687 Peptidase dimerisation domain CYG41_RS06245 PF03180 NLPA lipoprotein CYG41_RS06260 PF03180 NLPA lipoprotein CYG41_RS06265 PF00005 ABC transporter CYG41_RS06265 PF09383 NIL domain CYG41_RS06270 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS06275 PF00005 ABC transporter CYG41_RS06280 PF01458 Uncharacterized protein family (UPF0051) CYG41_RS06285 PF00266 Aminotransferase class-V CYG41_RS06290 PF01592 NifU-like N terminal domain CYG41_RS06295 PF01458 Uncharacterized protein family (UPF0051) CYG41_RS06320 PF00582 Universal stress protein family CYG41_RS06335 PF16193 AAA C-terminal domain CYG41_RS06335 PF05496 Holliday junction DNA helicase RuvB P-loop domain CYG41_RS06335 PF12002 MgsA AAA+ ATPase C terminal CYG41_RS06345 PF04262 Glutamate-cysteine ligase CYG41_RS06345 PF18419 ATP-grasp-like domain CYG41_RS06345 PF02655 ATP-grasp domain CYG41_RS06355 PF06335 Protein of unknown function (DUF1054) CYG41_RS06360 PF03315 Serine dehydratase beta chain CYG41_RS06360 PF01842 ACT domain CYG41_RS06365 PF03313 Serine dehydratase alpha chain CYG41_RS06370 PF00300 Histidine phosphatase superfamily (branch 1) CYG41_RS06375 PF01625 Peptide methionine sulfoxide reductase CYG41_RS06380 PF00106 short chain dehydrogenase CYG41_RS06390 PF01712 Deoxynucleoside kinase CYG41_RS06400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG41_RS06405 PF00512 His Kinase A (phospho-acceptor) domain CYG41_RS06405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG41_RS06410 PF00072 Response regulator receiver domain CYG41_RS06410 PF00486 Transcriptional regulatory protein, C terminal CYG41_RS06415 PF00005 ABC transporter CYG41_RS06425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG41_RS06425 PF03466 LysR substrate binding domain CYG41_RS06455 PF02645 Uncharacterised protein, DegV family COG1307 CYG41_RS06465 PF00196 Bacterial regulatory proteins, luxR family CYG41_RS06465 PF00072 Response regulator receiver domain CYG41_RS06470 PF07730 Histidine kinase CYG41_RS06470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG41_RS06480 PF00005 ABC transporter CYG41_RS06520 PF16921 Tex protein YqgF-like domain CYG41_RS06520 PF09371 Tex-like protein N-terminal domain CYG41_RS06520 PF00575 S1 RNA binding domain CYG41_RS06520 PF17674 HHH domain CYG41_RS06530 PF07722 Peptidase C26 CYG41_RS06535 PF13520 Amino acid permease CYG41_RS06540 PF01381 Helix-turn-helix CYG41_RS06545 PF13087 AAA domain CYG41_RS06545 PF13091 PLD-like domain CYG41_RS06550 PF00163 Ribosomal protein S4/S9 N-terminal domain CYG41_RS06550 PF01479 S4 domain CYG41_RS06555 PF13185 GAF domain CYG41_RS06560 PF06160 Septation ring formation regulator, EzrA CYG41_RS06570 PF00266 Aminotransferase class-V CYG41_RS06575 PF02926 THUMP domain CYG41_RS06575 PF02568 Thiamine biosynthesis protein (ThiI) CYG41_RS06580 PF06971 Putative DNA-binding protein N-terminus CYG41_RS06580 PF02629 CoA binding domain CYG41_RS06585 PF08264 Anticodon-binding domain of tRNA CYG41_RS06585 PF10458 Valyl tRNA synthetase tRNA binding arm CYG41_RS06585 PF00133 tRNA synthetases class I (I, L, M and V) CYG41_RS06590 PF08245 Mur ligase middle domain CYG41_RS06590 PF02875 Mur ligase family, glutamate ligase domain CYG41_RS06595 PF13419 Haloacid dehalogenase-like hydrolase CYG41_RS06600 PF04002 RadC-like JAB domain CYG41_RS06610 PF04085 rod shape-determining protein MreC CYG41_RS06620 PF03775 Septum formation inhibitor MinC, C-terminal domain CYG41_RS06625 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CYG41_RS06630 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS06635 PF00005 ABC transporter CYG41_RS06640 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG41_RS06650 PF13091 PLD-like domain CYG41_RS06650 PF13396 Phospholipase_D-nuclease N-terminal CYG41_RS06675 PF02381 MraZ protein, putative antitoxin-like CYG41_RS06680 PF01795 MraW methylase family CYG41_RS06690 PF00905 Penicillin binding protein transpeptidase domain CYG41_RS06690 PF03717 Penicillin-binding Protein dimerisation domain CYG41_RS06690 PF03793 PASTA domain CYG41_RS06695 PF00953 Glycosyl transferase family 4 CYG41_RS06695 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CYG41_RS06700 PF02875 Mur ligase family, glutamate ligase domain CYG41_RS06700 PF08245 Mur ligase middle domain CYG41_RS06705 PF04101 Glycosyltransferase family 28 C-terminal domain CYG41_RS06705 PF03033 Glycosyltransferase family 28 N-terminal domain CYG41_RS06710 PF03799 Cell division protein FtsQ CYG41_RS06710 PF08478 POTRA domain, FtsQ-type CYG41_RS06715 PF02491 SHS2 domain inserted in FTSA CYG41_RS06715 PF11983 Membrane-attachment and polymerisation-promoting switch CYG41_RS06720 PF00091 Tubulin/FtsZ family, GTPase domain CYG41_RS06720 PF12327 FtsZ family, C-terminal domain CYG41_RS06725 PF04472 Cell division protein SepF CYG41_RS06730 PF02325 YGGT family CYG41_RS06740 PF05103 DivIVA protein CYG41_RS06745 PF06827 Zinc finger found in FPG and IleRS CYG41_RS06745 PF00133 tRNA synthetases class I (I, L, M and V) CYG41_RS06745 PF08264 Anticodon-binding domain of tRNA CYG41_RS06750 PF00313 'Cold-shock' DNA-binding domain CYG41_RS06755 PF12849 PBP superfamily domain CYG41_RS06760 PF07690 Major Facilitator Superfamily CYG41_RS06765 PF05816 Toxic anion resistance protein (TelA) CYG41_RS06785 PF01048 Phosphorylase superfamily CYG41_RS06790 PF00266 Aminotransferase class-V CYG41_RS06805 PF17760 UvrA interaction domain CYG41_RS06805 PF17755 UvrA DNA-binding domain CYG41_RS06805 PF00005 ABC transporter CYG41_RS06825 PF13538 UvrD-like helicase C-terminal domain CYG41_RS06825 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CYG41_RS06825 PF14490 Helix-hairpin-helix containing domain CYG41_RS06835 PF00781 Diacylglycerol kinase catalytic domain CYG41_RS06845 PF00753 Metallo-beta-lactamase superfamily CYG41_RS06845 PF17770 Ribonuclease J C-terminal domain CYG41_RS06845 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CYG41_RS06850 PF07288 Protein of unknown function (DUF1447) CYG41_RS06870 PF01327 Polypeptide deformylase CYG41_RS06900 PF00676 Dehydrogenase E1 component CYG41_RS06905 PF02780 Transketolase, C-terminal domain CYG41_RS06905 PF02779 Transketolase, pyrimidine binding domain CYG41_RS06910 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CYG41_RS06910 PF00364 Biotin-requiring enzyme CYG41_RS06910 PF02817 e3 binding domain CYG41_RS06915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYG41_RS06915 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG41_RS06925 PF05256 Uncharacterised protein family (UPF0223) CYG41_RS06930 PF00459 Inositol monophosphatase family CYG41_RS06935 PF00009 Elongation factor Tu GTP binding domain CYG41_RS06935 PF00679 Elongation factor G C-terminus CYG41_RS06935 PF14492 Elongation Factor G, domain II CYG41_RS06935 PF03144 Elongation factor Tu domain 2 CYG41_RS06940 PF01098 Cell cycle protein CYG41_RS06945 PF02785 Biotin carboxylase C-terminal domain CYG41_RS06945 PF00289 Biotin carboxylase, N-terminal domain CYG41_RS06945 PF00364 Biotin-requiring enzyme CYG41_RS06945 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYG41_RS06945 PF02436 Conserved carboxylase domain CYG41_RS06945 PF00682 HMGL-like CYG41_RS06950 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) CYG41_RS06960 PF01467 Cytidylyltransferase-like CYG41_RS06965 PF05362 Lon protease (S16) C-terminal proteolytic domain CYG41_RS06965 PF13180 PDZ domain CYG41_RS06975 PF00753 Metallo-beta-lactamase superfamily CYG41_RS06975 PF13567 Domain of unknown function (DUF4131) CYG41_RS06975 PF03772 Competence protein CYG41_RS06980 PF06144 DNA polymerase III, delta subunit CYG41_RS06985 PF01649 Ribosomal protein S20 CYG41_RS06990 PF00312 Ribosomal protein S15 CYG41_RS07000 PF17770 Ribonuclease J C-terminal domain CYG41_RS07000 PF00753 Metallo-beta-lactamase superfamily CYG41_RS07000 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CYG41_RS07010 PF00009 Elongation factor Tu GTP binding domain CYG41_RS07010 PF03144 Elongation factor Tu domain 2 CYG41_RS07010 PF03143 Elongation factor Tu C-terminal domain CYG41_RS07025 PF02146 Sir2 family CYG41_RS07035 PF13411 MerR HTH family regulatory protein CYG41_RS07040 PF00664 ABC transporter transmembrane region CYG41_RS07040 PF00005 ABC transporter CYG41_RS07045 PF05698 Bacterial trigger factor protein (TF) C-terminus CYG41_RS07045 PF05697 Bacterial trigger factor protein (TF) CYG41_RS07045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CYG41_RS07050 PF07724 AAA domain (Cdc48 subfamily) CYG41_RS07050 PF06689 ClpX C4-type zinc finger CYG41_RS07050 PF10431 C-terminal, D2-small domain, of ClpB protein CYG41_RS07055 PF01926 50S ribosome-binding GTPase CYG41_RS07070 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS07075 PF00005 ABC transporter CYG41_RS07080 PF02151 UvrB/uvrC motif CYG41_RS07080 PF01541 GIY-YIG catalytic domain CYG41_RS07080 PF08459 UvrC Helix-hairpin-helix N-terminal CYG41_RS07085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYG41_RS07085 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS07090 PF00294 pfkB family carbohydrate kinase CYG41_RS07095 PF08220 DeoR-like helix-turn-helix domain CYG41_RS07095 PF00455 DeoR C terminal sensor domain CYG41_RS07100 PF09269 Domain of unknown function (DUF1967) CYG41_RS07100 PF01018 GTP1/OBG CYG41_RS07100 PF01926 50S ribosome-binding GTPase CYG41_RS07105 PF01757 Acyltransferase family CYG41_RS07110 PF12706 Beta-lactamase superfamily domain CYG41_RS07110 PF00753 Metallo-beta-lactamase superfamily CYG41_RS07115 PF00106 short chain dehydrogenase CYG41_RS07120 PF06305 Lipopolysaccharide assembly protein A domain CYG41_RS07125 PF17871 AAA lid domain CYG41_RS07125 PF10431 C-terminal, D2-small domain, of ClpB protein CYG41_RS07125 PF00004 ATPase family associated with various cellular activities (AAA) CYG41_RS07125 PF07724 AAA domain (Cdc48 subfamily) CYG41_RS07125 PF02861 Clp amino terminal domain, pathogenicity island component CYG41_RS07130 PF01783 Ribosomal L32p protein family CYG41_RS07140 PF00149 Calcineurin-like phosphoesterase CYG41_RS07140 PF02872 5'-nucleotidase, C-terminal domain CYG41_RS07155 PF07733 Bacterial DNA polymerase III alpha NTPase domain CYG41_RS07155 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CYG41_RS07155 PF14579 Helix-hairpin-helix motif CYG41_RS07155 PF02811 PHP domain CYG41_RS07155 PF01336 OB-fold nucleic acid binding domain CYG41_RS07160 PF00365 Phosphofructokinase CYG41_RS07165 PF02887 Pyruvate kinase, alpha/beta domain CYG41_RS07165 PF00224 Pyruvate kinase, barrel domain CYG41_RS07165 PF00391 PEP-utilising enzyme, mobile domain CYG41_RS07170 PF04284 Protein of unknown function (DUF441) CYG41_RS07175 PF13509 S1 domain CYG41_RS07175 PF17783 CvfB-like winged helix domain CYG41_RS07180 PF02899 Phage integrase, N-terminal SAM-like domain CYG41_RS07180 PF00589 Phage integrase family CYG41_RS07185 PF00583 Acetyltransferase (GNAT) family CYG41_RS07190 PF02616 Segregation and condensation protein ScpA CYG41_RS07195 PF04079 Segregation and condensation complex subunit ScpB CYG41_RS07200 PF00849 RNA pseudouridylate synthase CYG41_RS07200 PF01479 S4 domain CYG41_RS07205 PF12822 ECF transporter, substrate-specific component CYG41_RS07220 PF00271 Helicase conserved C-terminal domain CYG41_RS07220 PF00270 DEAD/DEAH box helicase CYG41_RS07230 PF02224 Cytidylate kinase CYG41_RS07235 PF00575 S1 RNA binding domain CYG41_RS07240 PF01926 50S ribosome-binding GTPase CYG41_RS07240 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CYG41_RS07245 PF00216 Bacterial DNA-binding protein CYG41_RS07255 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CYG41_RS07255 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CYG41_RS07260 PF13735 tRNA nucleotidyltransferase domain 2 putative CYG41_RS07260 PF12627 Probable RNA and SrmB- binding site of polymerase A CYG41_RS07260 PF01743 Poly A polymerase head domain CYG41_RS07270 PF12848 ABC transporter CYG41_RS07270 PF16326 ABC transporter C-terminal domain CYG41_RS07270 PF00005 ABC transporter CYG41_RS07275 PF00303 Thymidylate synthase CYG41_RS07280 PF00186 Dihydrofolate reductase CYG41_RS07285 PF03006 Haemolysin-III related CYG41_RS07290 PF02645 Uncharacterised protein, DegV family COG1307 CYG41_RS07295 PF13472 GDSL-like Lipase/Acylhydrolase family CYG41_RS07300 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) CYG41_RS07305 PF01625 Peptide methionine sulfoxide reductase CYG41_RS07310 PF06855 YozE SAM-like fold CYG41_RS07315 PF03572 Peptidase family S41 CYG41_RS07315 PF01471 Putative peptidoglycan binding domain CYG41_RS07315 PF17820 PDZ domain CYG41_RS07335 PF01926 50S ribosome-binding GTPase CYG41_RS07340 PF01351 Ribonuclease HII CYG41_RS07345 PF02481 DNA recombination-mediator protein A CYG41_RS07345 PF18255 DNA processing protein A sterile alpha motif domain CYG41_RS07350 PF01131 DNA topoisomerase CYG41_RS07350 PF01396 Topoisomerase DNA binding C4 zinc finger CYG41_RS07350 PF01751 Toprim domain CYG41_RS07355 PF01134 Glucose inhibited division protein A CYG41_RS07360 PF00589 Phage integrase family CYG41_RS07360 PF02899 Phage integrase, N-terminal SAM-like domain CYG41_RS07365 PF00227 Proteasome subunit CYG41_RS07375 PF00004 ATPase family associated with various cellular activities (AAA) CYG41_RS07375 PF10431 C-terminal, D2-small domain, of ClpB protein CYG41_RS07375 PF07724 AAA domain (Cdc48 subfamily) CYG41_RS07385 PF02660 Glycerol-3-phosphate acyltransferase CYG41_RS07390 PF00204 DNA gyrase B CYG41_RS07390 PF00986 DNA gyrase B subunit, carboxyl terminus CYG41_RS07390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG41_RS07390 PF01751 Toprim domain CYG41_RS07395 PF00521 DNA gyrase/topoisomerase IV, subunit A CYG41_RS07395 PF03989 DNA gyrase C-terminal domain, beta-propeller CYG41_RS07400 PF02901 Pyruvate formate lyase-like CYG41_RS07400 PF01228 Glycine radical CYG41_RS07405 PF04055 Radical SAM superfamily CYG41_RS07410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG41_RS07410 PF03466 LysR substrate binding domain CYG41_RS07415 PF02833 DHHA2 domain CYG41_RS07415 PF01368 DHH family CYG41_RS07420 PF13495 Phage integrase, N-terminal SAM-like domain CYG41_RS07420 PF00589 Phage integrase family CYG41_RS07425 PF02687 FtsX-like permease family CYG41_RS07430 PF00005 ABC transporter CYG41_RS07435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG41_RS07440 PF00072 Response regulator receiver domain CYG41_RS07440 PF00486 Transcriptional regulatory protein, C terminal CYG41_RS07460 PF00881 Nitroreductase family CYG41_RS07465 PF01557 Fumarylacetoacetate (FAA) hydrolase family CYG41_RS07470 PF00155 Aminotransferase class I and II CYG41_RS07475 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CYG41_RS07480 PF01502 Phosphoribosyl-AMP cyclohydrolase CYG41_RS07485 PF00977 Histidine biosynthesis protein CYG41_RS07490 PF00977 Histidine biosynthesis protein CYG41_RS07495 PF00117 Glutamine amidotransferase class-I CYG41_RS07500 PF00475 Imidazoleglycerol-phosphate dehydratase CYG41_RS07510 PF00815 Histidinol dehydrogenase CYG41_RS07515 PF01634 ATP phosphoribosyltransferase CYG41_RS07520 PF13393 Histidyl-tRNA synthetase CYG41_RS07525 PF00155 Aminotransferase class I and II CYG41_RS07530 PF00293 NUDIX domain CYG41_RS07535 PF02645 Uncharacterised protein, DegV family COG1307 CYG41_RS07550 PF05670 NFACT protein RNA binding domain CYG41_RS07565 PF00156 Phosphoribosyl transferase domain CYG41_RS07570 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CYG41_RS07575 PF01180 Dihydroorotate dehydrogenase CYG41_RS07580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYG41_RS07580 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CYG41_RS07580 PF02142 MGS-like domain CYG41_RS07585 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CYG41_RS07585 PF00117 Glutamine amidotransferase class-I CYG41_RS07590 PF01979 Amidohydrolase family CYG41_RS07595 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CYG41_RS07595 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CYG41_RS07600 PF00860 Permease family CYG41_RS07605 PF00156 Phosphoribosyl transferase domain CYG41_RS07615 PF01479 S4 domain CYG41_RS07615 PF00849 RNA pseudouridylate synthase CYG41_RS07620 PF01252 Signal peptidase (SPase) II CYG41_RS07630 PF01268 Formate--tetrahydrofolate ligase CYG41_RS07640 PF13456 Reverse transcriptase-like CYG41_RS07650 PF13396 Phospholipase_D-nuclease N-terminal CYG41_RS07650 PF13091 PLD-like domain CYG41_RS07670 PF02867 Ribonucleotide reductase, barrel domain CYG41_RS07670 PF00317 Ribonucleotide reductase, all-alpha domain CYG41_RS07670 PF08343 Ribonucleotide reductase N-terminal CYG41_RS07675 PF00268 Ribonucleotide reductase, small chain CYG41_RS07680 PF03466 LysR substrate binding domain CYG41_RS07680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG41_RS07690 PF05649 Peptidase family M13 CYG41_RS07690 PF01431 Peptidase family M13 CYG41_RS07695 PF03099 Biotin/lipoate A/B protein ligase family CYG41_RS07695 PF10437 Bacterial lipoate protein ligase C-terminus CYG41_RS07705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYG41_RS07710 PF01170 Putative RNA methylase family UPF0020 CYG41_RS07710 PF02926 THUMP domain CYG41_RS07725 PF05103 DivIVA protein CYG41_RS07730 PF06908 YspA SLOG family CYG41_RS07735 PF03838 Recombination protein U CYG41_RS07740 PF00912 Transglycosylase CYG41_RS07740 PF00905 Penicillin binding protein transpeptidase domain CYG41_RS07745 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CYG41_RS07750 PF00730 HhH-GPD superfamily base excision DNA repair protein CYG41_RS07750 PF10576 Iron-sulfur binding domain of endonuclease III CYG41_RS07750 PF00633 Helix-hairpin-helix motif CYG41_RS07760 PF01336 OB-fold nucleic acid binding domain CYG41_RS07760 PF00152 tRNA synthetases class II (D, K and N) CYG41_RS07765 PF00155 Aminotransferase class I and II CYG41_RS07780 PF13307 Helicase C-terminal domain CYG41_RS07780 PF00929 Exonuclease CYG41_RS07780 PF04851 Type III restriction enzyme, res subunit CYG41_RS07785 PF00580 UvrD/REP helicase N-terminal domain CYG41_RS07785 PF12705 PD-(D/E)XK nuclease superfamily CYG41_RS07785 PF13361 UvrD-like helicase C-terminal domain CYG41_RS07790 PF12705 PD-(D/E)XK nuclease superfamily CYG41_RS07795 PF00288 GHMP kinases N terminal domain CYG41_RS07795 PF10509 Galactokinase galactose-binding signature CYG41_RS07795 PF08544 GHMP kinases C terminal CYG41_RS07805 PF01070 FMN-dependent dehydrogenase CYG41_RS07810 PF17126 RsmF rRNA methyltransferase first C-terminal domain CYG41_RS07810 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CYG41_RS07810 PF01189 16S rRNA methyltransferase RsmB/F CYG41_RS07830 PF01883 Iron-sulfur cluster assembly protein CYG41_RS07835 PF01361 Tautomerase enzyme CYG41_RS07845 PF03412 Peptidase C39 family CYG41_RS07845 PF00664 ABC transporter transmembrane region CYG41_RS07845 PF00005 ABC transporter CYG41_RS07850 PF00664 ABC transporter transmembrane region CYG41_RS07850 PF03412 Peptidase C39 family CYG41_RS07850 PF00005 ABC transporter CYG41_RS07855 PF01784 NIF3 (NGG1p interacting factor 3) CYG41_RS07860 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CYG41_RS07865 PF03979 Sigma-70 factor, region 1.1 CYG41_RS07865 PF00140 Sigma-70 factor, region 1.2 CYG41_RS07865 PF04542 Sigma-70 region 2 CYG41_RS07865 PF04545 Sigma-70, region 4 CYG41_RS07865 PF04539 Sigma-70 region 3 CYG41_RS07870 PF01807 CHC2 zinc finger CYG41_RS07870 PF08275 DNA primase catalytic core, N-terminal domain CYG41_RS07870 PF10410 DnaB-helicase binding domain of primase CYG41_RS07875 PF02092 Glycyl-tRNA synthetase beta subunit CYG41_RS07880 PF02091 Glycyl-tRNA synthetase alpha subunit CYG41_RS07940 PF01464 Transglycosylase SLT domain CYG41_RS08005 PF00239 Resolvase, N terminal domain CYG41_RS08005 PF02796 Helix-turn-helix domain of resolvase CYG41_RS08015 PF00535 Glycosyl transferase family 2 CYG41_RS08035 PF00436 Single-strand binding protein family CYG41_RS08075 PF00005 ABC transporter CYG41_RS08075 PF09383 NIL domain CYG41_RS08085 PF02565 Recombination protein O C terminal CYG41_RS08085 PF11967 Recombination protein O N terminal CYG41_RS08090 PF01926 50S ribosome-binding GTPase CYG41_RS08090 PF07650 KH domain CYG41_RS08095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CYG41_RS08105 PF02130 Uncharacterized protein family UPF0054 CYG41_RS08110 PF02562 PhoH-like protein CYG41_RS08120 PF01165 Ribosomal protein S21 CYG41_RS08125 PF03618 Kinase/pyrophosphorylase CYG41_RS08130 PF01261 Xylose isomerase-like TIM barrel CYG41_RS08135 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CYG41_RS08135 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CYG41_RS08140 PF01641 SelR domain CYG41_RS08145 PF00152 tRNA synthetases class II (D, K and N) CYG41_RS08145 PF02938 GAD domain CYG41_RS08145 PF01336 OB-fold nucleic acid binding domain CYG41_RS08150 PF03129 Anticodon binding domain CYG41_RS08150 PF13393 Histidyl-tRNA synthetase CYG41_RS08165 PF00005 ABC transporter CYG41_RS08175 PF01520 N-acetylmuramoyl-L-alanine amidase CYG41_RS08175 PF08239 Bacterial SH3 domain CYG41_RS08185 PF02580 D-Tyr-tRNA(Tyr) deacylase CYG41_RS08190 PF13291 ACT domain CYG41_RS08190 PF02824 TGS domain CYG41_RS08190 PF04607 Region found in RelA / SpoT proteins CYG41_RS08205 PF04452 RNA methyltransferase CYG41_RS08220 PF02245 Methylpurine-DNA glycosylase (MPG) CYG41_RS08250 PF02525 Flavodoxin-like fold CYG41_RS08255 PF13305 Tetracyclin repressor-like, C-terminal domain CYG41_RS08255 PF00440 Bacterial regulatory proteins, tetR family CYG41_RS08280 PF00534 Glycosyl transferases group 1 CYG41_RS08285 PF00534 Glycosyl transferases group 1 CYG41_RS08330 PF04073 Aminoacyl-tRNA editing domain CYG41_RS08335 PF00156 Phosphoribosyl transferase domain CYG41_RS08340 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CYG41_RS08340 PF01368 DHH family CYG41_RS08340 PF17768 RecJ OB domain CYG41_RS08340 PF02272 DHHA1 domain CYG41_RS08360 PF00009 Elongation factor Tu GTP binding domain CYG41_RS08360 PF00679 Elongation factor G C-terminus CYG41_RS08360 PF03144 Elongation factor Tu domain 2 CYG41_RS08360 PF06421 GTP-binding protein LepA C-terminus CYG41_RS08365 PF00684 DnaJ central domain CYG41_RS08365 PF01556 DnaJ C terminal domain CYG41_RS08365 PF00226 DnaJ domain CYG41_RS08375 PF00012 Hsp70 protein CYG41_RS08380 PF01025 GrpE CYG41_RS08385 PF08279 HTH domain CYG41_RS08385 PF01628 HrcA protein C terminal domain CYG41_RS08390 PF06969 HemN C-terminal domain CYG41_RS08390 PF04055 Radical SAM superfamily CYG41_RS08395 PF01687 Riboflavin kinase CYG41_RS08395 PF06574 FAD synthetase CYG41_RS08400 PF16198 tRNA pseudouridylate synthase B C-terminal domain CYG41_RS08400 PF01509 TruB family pseudouridylate synthase (N terminal domain) CYG41_RS08405 PF03741 Integral membrane protein TerC family CYG41_RS08410 PF02033 Ribosome-binding factor A CYG41_RS08415 PF04760 Translation initiation factor IF-2, N-terminal region CYG41_RS08415 PF11987 Translation-initiation factor 2 CYG41_RS08415 PF00009 Elongation factor Tu GTP binding domain CYG41_RS08420 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CYG41_RS08430 PF13184 NusA-like KH domain CYG41_RS08430 PF08529 NusA N-terminal domain CYG41_RS08430 PF00575 S1 RNA binding domain CYG41_RS08435 PF02576 RimP N-terminal domain CYG41_RS08435 PF17384 RimP C-terminal SH3 domain CYG41_RS08440 PF14480 DNA polymerase III polC-type N-terminus I CYG41_RS08440 PF11490 DNA polymerase III polC-type N-terminus II CYG41_RS08440 PF02811 PHP domain CYG41_RS08440 PF01336 OB-fold nucleic acid binding domain CYG41_RS08440 PF07733 Bacterial DNA polymerase III alpha NTPase domain CYG41_RS08440 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CYG41_RS08440 PF14579 Helix-hairpin-helix motif CYG41_RS08440 PF00929 Exonuclease CYG41_RS08445 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYG41_RS08445 PF04073 Aminoacyl-tRNA editing domain CYG41_RS08445 PF03129 Anticodon binding domain CYG41_RS08450 PF17820 PDZ domain CYG41_RS08450 PF02163 Peptidase family M50 CYG41_RS08460 PF01255 Putative undecaprenyl diphosphate synthase CYG41_RS08465 PF01527 Transposase CYG41_RS08470 PF13276 HTH-like domain CYG41_RS08470 PF00665 Integrase core domain CYG41_RS08470 PF13333 Integrase core domain CYG41_RS08475 PF01765 Ribosome recycling factor CYG41_RS08480 PF00696 Amino acid kinase family CYG41_RS08490 PF00889 Elongation factor TS CYG41_RS08495 PF00318 Ribosomal protein S2 CYG41_RS08500 PF01541 GIY-YIG catalytic domain CYG41_RS08505 PF05175 Methyltransferase small domain CYG41_RS08510 PF01553 Acyltransferase CYG41_RS08515 PF13520 Amino acid permease CYG41_RS08525 PF00005 ABC transporter CYG41_RS08525 PF00664 ABC transporter transmembrane region CYG41_RS08530 PF00005 ABC transporter CYG41_RS08530 PF00664 ABC transporter transmembrane region CYG41_RS08535 PF03672 Uncharacterised protein family (UPF0154) CYG41_RS08540 PF05979 Bacterial protein of unknown function (DUF896) CYG41_RS08550 PF01245 Ribosomal protein L19 CYG41_RS08555 PF01746 tRNA (Guanine-1)-methyltransferase CYG41_RS08560 PF01782 RimM N-terminal domain CYG41_RS08560 PF05239 PRC-barrel domain CYG41_RS08570 PF00886 Ribosomal protein S16 CYG41_RS08575 PF02978 Signal peptide binding domain CYG41_RS08575 PF02881 SRP54-type protein, helical bundle domain CYG41_RS08575 PF00448 SRP54-type protein, GTPase domain CYG41_RS08580 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CYG41_RS08600 PF00448 SRP54-type protein, GTPase domain CYG41_RS08600 PF02881 SRP54-type protein, helical bundle domain CYG41_RS08605 PF06470 SMC proteins Flexible Hinge Domain CYG41_RS08605 PF02463 RecF/RecN/SMC N terminal domain CYG41_RS08610 PF14622 Ribonuclease-III-like CYG41_RS08610 PF00035 Double-stranded RNA binding motif CYG41_RS08615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG41_RS08620 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS08625 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS08630 PF00005 ABC transporter CYG41_RS08630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG41_RS08635 PF00005 ABC transporter CYG41_RS08635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG41_RS08640 PF00550 Phosphopantetheine attachment site CYG41_RS08645 PF02504 Fatty acid synthesis protein CYG41_RS08650 PF00270 DEAD/DEAH box helicase CYG41_RS08650 PF00271 Helicase conserved C-terminal domain CYG41_RS08650 PF17191 RecG wedge domain CYG41_RS08655 PF02734 DAK2 domain CYG41_RS08655 PF13684 Dihydroxyacetone kinase family CYG41_RS08660 PF03780 Asp23 family, cell envelope-related function CYG41_RS08665 PF00830 Ribosomal L28 family CYG41_RS08670 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CYG41_RS08670 PF04263 Thiamin pyrophosphokinase, catalytic domain CYG41_RS08675 PF00834 Ribulose-phosphate 3 epimerase family CYG41_RS08680 PF03193 RsgA GTPase CYG41_RS08680 PF16745 RsgA N-terminal domain CYG41_RS08685 PF00069 Protein kinase domain CYG41_RS08685 PF03793 PASTA domain CYG41_RS08695 PF01189 16S rRNA methyltransferase RsmB/F CYG41_RS08695 PF01029 NusB family CYG41_RS08700 PF02911 Formyl transferase, C-terminal domain CYG41_RS08700 PF00551 Formyl transferase CYG41_RS08705 PF04851 Type III restriction enzyme, res subunit CYG41_RS08705 PF18074 Primosomal protein N C-terminal domain CYG41_RS08705 PF17764 3′ DNA-binding domain (3′BD) CYG41_RS08705 PF00271 Helicase conserved C-terminal domain CYG41_RS08705 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CYG41_RS08710 PF04127 DNA / pantothenate metabolism flavoprotein CYG41_RS08710 PF02441 Flavoprotein CYG41_RS08715 PF01192 RNA polymerase Rpb6 CYG41_RS08720 PF00625 Guanylate kinase CYG41_RS08735 PF02463 RecF/RecN/SMC N terminal domain CYG41_RS08740 PF01316 Arginine repressor, DNA binding domain CYG41_RS08740 PF02863 Arginine repressor, C-terminal domain CYG41_RS08745 PF01479 S4 domain CYG41_RS08745 PF01728 FtsJ-like methyltransferase CYG41_RS08750 PF00348 Polyprenyl synthetase CYG41_RS08755 PF02609 Exonuclease VII small subunit CYG41_RS08760 PF02601 Exonuclease VII, large subunit CYG41_RS08760 PF13742 OB-fold nucleic acid binding domain CYG41_RS08765 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CYG41_RS08765 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CYG41_RS08770 PF01029 NusB family CYG41_RS08775 PF03780 Asp23 family, cell envelope-related function CYG41_RS08780 PF09285 Elongation factor P, C-terminal CYG41_RS08780 PF08207 Elongation factor P (EF-P) KOW-like domain CYG41_RS08780 PF01132 Elongation factor P (EF-P) OB domain CYG41_RS08785 PF00557 Metallopeptidase family M24 CYG41_RS08785 PF01321 Creatinase/Prolidase N-terminal domain CYG41_RS08790 PF01016 Ribosomal L27 protein CYG41_RS08795 PF04327 Cysteine protease Prp CYG41_RS08800 PF00829 Ribosomal prokaryotic L21 protein CYG41_RS08825 PF00005 ABC transporter CYG41_RS08825 PF00664 ABC transporter transmembrane region CYG41_RS08830 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal CYG41_RS08830 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CYG41_RS08830 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CYG41_RS08835 PF00120 Glutamine synthetase, catalytic domain CYG41_RS08835 PF03951 Glutamine synthetase, beta-Grasp domain CYG41_RS08840 PF13411 MerR HTH family regulatory protein CYG41_RS08845 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CYG41_RS08845 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CYG41_RS08845 PF01276 Orn/Lys/Arg decarboxylase, major domain CYG41_RS08850 PF06838 Methionine gamma-lyase CYG41_RS08865 PF00581 Rhodanese-like domain CYG41_RS08870 PF00480 ROK family CYG41_RS08880 PF01694 Rhomboid family CYG41_RS08885 PF03717 Penicillin-binding Protein dimerisation domain CYG41_RS08885 PF00905 Penicillin binding protein transpeptidase domain CYG41_RS08890 PF06782 Uncharacterised protein family (UPF0236) CYG41_RS08900 PF01521 Iron-sulphur cluster biosynthesis CYG41_RS08905 PF00196 Bacterial regulatory proteins, luxR family CYG41_RS08905 PF00072 Response regulator receiver domain CYG41_RS08910 PF07730 Histidine kinase CYG41_RS08910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG41_RS08920 PF01272 Transcription elongation factor, GreA/GreB, C-term CYG41_RS08920 PF03449 Transcription elongation factor, N-terminal CYG41_RS08925 PF00485 Phosphoribulokinase / Uridine kinase family CYG41_RS08930 PF02618 YceG-like family CYG41_RS08940 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CYG41_RS08940 PF01588 Putative tRNA binding domain CYG41_RS08940 PF03483 B3/4 domain CYG41_RS08940 PF03147 Ferredoxin-fold anticodon binding domain CYG41_RS08940 PF03484 tRNA synthetase B5 domain CYG41_RS08945 PF01409 tRNA synthetases class II core domain (F) CYG41_RS08945 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CYG41_RS08950 PF01638 HxlR-like helix-turn-helix CYG41_RS08960 PF00588 SpoU rRNA Methylase family CYG41_RS08960 PF08032 RNA 2'-O ribose methyltransferase substrate binding CYG41_RS08965 PF00708 Acylphosphatase CYG41_RS08970 PF02096 60Kd inner membrane protein CYG41_RS08975 PF18719 ArlS sensor domain CYG41_RS08975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG41_RS08975 PF00512 His Kinase A (phospho-acceptor) domain CYG41_RS08980 PF00072 Response regulator receiver domain CYG41_RS08980 PF00486 Transcriptional regulatory protein, C terminal CYG41_RS08985 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CYG41_RS08985 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CYG41_RS08990 PF01464 Transglycosylase SLT domain CYG41_RS08990 PF10145 Phage-related minor tail protein CYG41_RS08990 PF01551 Peptidase family M23 CYG41_RS09010 PF05636 HIGH Nucleotidyl Transferase CYG41_RS09015 PF13649 Methyltransferase domain CYG41_RS09030 PF01467 Cytidylyltransferase-like CYG41_RS09035 PF01985 CRS1 / YhbY (CRM) domain CYG41_RS09040 PF01926 50S ribosome-binding GTPase CYG41_RS09050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CYG41_RS09060 PF01738 Dienelactone hydrolase family CYG41_RS09070 PF03641 Possible lysine decarboxylase CYG41_RS09075 PF00453 Ribosomal protein L20 CYG41_RS09080 PF01632 Ribosomal protein L35 CYG41_RS09085 PF05198 Translation initiation factor IF-3, N-terminal domain CYG41_RS09085 PF00707 Translation initiation factor IF-3, C-terminal domain CYG41_RS09100 PF07690 Major Facilitator Superfamily CYG41_RS09105 PF02146 Sir2 family CYG41_RS09120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYG41_RS09120 PF02824 TGS domain CYG41_RS09120 PF03129 Anticodon binding domain CYG41_RS09130 PF07319 Primosomal protein DnaI N-terminus CYG41_RS09130 PF01695 IstB-like ATP binding protein CYG41_RS09140 PF03477 ATP cone domain CYG41_RS09145 PF01121 Dephospho-CoA kinase CYG41_RS09150 PF06827 Zinc finger found in FPG and IleRS CYG41_RS09150 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CYG41_RS09150 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CYG41_RS09155 PF00476 DNA polymerase family A CYG41_RS09155 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CYG41_RS09155 PF01367 5'-3' exonuclease, C-terminal SAM fold CYG41_RS09165 PF01027 Inhibitor of apoptosis-promoting Bax1 CYG41_RS09195 PF01225 Mur ligase family, catalytic domain CYG41_RS09195 PF02875 Mur ligase family, glutamate ligase domain CYG41_RS09195 PF08245 Mur ligase middle domain CYG41_RS09200 PF09397 Ftsk gamma domain CYG41_RS09200 PF17854 FtsK alpha domain CYG41_RS09200 PF01580 FtsK/SpoIIIE family CYG41_RS09210 PF01588 Putative tRNA binding domain CYG41_RS09210 PF14794 Domain of unknown function (DUF4479) CYG41_RS09215 PF00085 Thioredoxin CYG41_RS09225 PF02390 Putative methyltransferase CYG41_RS09240 PF05975 Bacterial ABC transporter protein EcsB CYG41_RS09245 PF00005 ABC transporter CYG41_RS09250 PF01230 HIT domain CYG41_RS09265 PF01966 HD domain CYG41_RS09270 PF06133 Control of competence regulator ComK, YlbF/YmcA CYG41_RS09275 PF00905 Penicillin binding protein transpeptidase domain CYG41_RS09275 PF00912 Transglycosylase CYG41_RS09280 PF01479 S4 domain CYG41_RS09280 PF00849 RNA pseudouridylate synthase CYG41_RS09285 PF02863 Arginine repressor, C-terminal domain CYG41_RS09285 PF01316 Arginine repressor, DNA binding domain CYG41_RS09290 PF03485 Arginyl tRNA synthetase N terminal domain CYG41_RS09290 PF00750 tRNA synthetases class I (R) CYG41_RS09290 PF05746 DALR anticodon binding domain CYG41_RS09310 PF01180 Dihydroorotate dehydrogenase CYG41_RS09320 PF05389 Negative regulator of genetic competence (MecA) CYG41_RS09325 PF03960 ArsC family CYG41_RS09330 PF12706 Beta-lactamase superfamily domain CYG41_RS09345 PF00005 ABC transporter CYG41_RS09360 PF00072 Response regulator receiver domain CYG41_RS09360 PF00486 Transcriptional regulatory protein, C terminal CYG41_RS09365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG41_RS09380 PF03965 Penicillinase repressor CYG41_RS09385 PF02843 Phosphoribosylglycinamide synthetase, C domain CYG41_RS09385 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CYG41_RS09385 PF02844 Phosphoribosylglycinamide synthetase, N domain CYG41_RS09395 PF02142 MGS-like domain CYG41_RS09395 PF01808 AICARFT/IMPCHase bienzyme CYG41_RS09400 PF00551 Formyl transferase CYG41_RS09405 PF02769 AIR synthase related protein, C-terminal domain CYG41_RS09405 PF00586 AIR synthase related protein, N-terminal domain CYG41_RS09410 PF00156 Phosphoribosyl transferase domain CYG41_RS09410 PF13537 Glutamine amidotransferase domain CYG41_RS09415 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CYG41_RS09415 PF02769 AIR synthase related protein, C-terminal domain CYG41_RS09415 PF00586 AIR synthase related protein, N-terminal domain CYG41_RS09425 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CYG41_RS09430 PF01259 SAICAR synthetase CYG41_RS09435 PF02222 ATP-grasp domain CYG41_RS09435 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CYG41_RS09440 PF00731 AIR carboxylase CYG41_RS09445 PF09515 Thiamine transporter protein (Thia_YuaJ) CYG41_RS09460 PF00083 Sugar (and other) transporter CYG41_RS09475 PF05524 PEP-utilising enzyme, N-terminal CYG41_RS09475 PF00391 PEP-utilising enzyme, mobile domain CYG41_RS09475 PF02896 PEP-utilising enzyme, TIM barrel domain CYG41_RS09480 PF00381 PTS HPr component phosphorylation site CYG41_RS09490 PF10431 C-terminal, D2-small domain, of ClpB protein CYG41_RS09490 PF17871 AAA lid domain CYG41_RS09490 PF07724 AAA domain (Cdc48 subfamily) CYG41_RS09490 PF00004 ATPase family associated with various cellular activities (AAA) CYG41_RS09500 PF00009 Elongation factor Tu GTP binding domain CYG41_RS09500 PF16658 Class II release factor RF3, C-terminal domain CYG41_RS09500 PF03144 Elongation factor Tu domain 2 CYG41_RS09505 PF00571 CBS domain CYG41_RS09505 PF03471 Transporter associated domain CYG41_RS09505 PF01595 Cyclin M transmembrane N-terminal domain CYG41_RS09510 PF01594 AI-2E family transporter CYG41_RS09515 PF13673 Acetyltransferase (GNAT) domain CYG41_RS09525 PF04167 Protein of unknown function (DUF402) CYG41_RS09530 PF02631 RecX family CYG41_RS09545 PF01938 TRAM domain CYG41_RS09545 PF05958 tRNA (Uracil-5-)-methyltransferase CYG41_RS09555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG41_RS09555 PF00205 Thiamine pyrophosphate enzyme, central domain CYG41_RS09555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG41_RS09565 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal CYG41_RS09565 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal CYG41_RS09570 PF00368 Hydroxymethylglutaryl-coenzyme A reductase CYG41_RS09575 PF02803 Thiolase, C-terminal domain CYG41_RS09575 PF00108 Thiolase, N-terminal domain CYG41_RS09610 PF01263 Aldose 1-epimerase CYG41_RS09615 PF01546 Peptidase family M20/M25/M40 CYG41_RS09615 PF07687 Peptidase dimerisation domain CYG41_RS09640 PF10263 SprT-like family CYG41_RS09645 PF00005 ABC transporter CYG41_RS09650 PF02653 Branched-chain amino acid transport system / permease component CYG41_RS09665 PF00689 Cation transporting ATPase, C-terminus CYG41_RS09665 PF00690 Cation transporter/ATPase, N-terminus CYG41_RS09675 PF00144 Beta-lactamase CYG41_RS09680 PF02540 NAD synthase CYG41_RS09685 PF00144 Beta-lactamase CYG41_RS09690 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CYG41_RS09690 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CYG41_RS09690 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CYG41_RS09700 PF00392 Bacterial regulatory proteins, gntR family CYG41_RS09700 PF07702 UTRA domain CYG41_RS09705 PF01979 Amidohydrolase family CYG41_RS09710 PF03807 NADP oxidoreductase coenzyme F420-dependent CYG41_RS09710 PF14748 Pyrroline-5-carboxylate reductase dimerisation CYG41_RS09715 PF07676 WD40-like Beta Propeller Repeat CYG41_RS09715 PF00326 Prolyl oligopeptidase family CYG41_RS09740 PF00854 POT family CYG41_RS09745 PF12704 MacB-like periplasmic core domain CYG41_RS09745 PF00005 ABC transporter CYG41_RS09745 PF02687 FtsX-like permease family CYG41_RS09785 PF02421 Ferrous iron transport protein B CYG41_RS09785 PF17910 FeoB cytosolic helical domain CYG41_RS09785 PF07664 Ferrous iron transport protein B C terminus CYG41_RS09785 PF07670 Nucleoside recognition CYG41_RS09800 PF01757 Acyltransferase family CYG41_RS09865 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CYG41_RS09865 PF02403 Seryl-tRNA synthetase N-terminal domain CYG41_RS09885 PF00324 Amino acid permease CYG41_RS09895 PF03306 Alpha-acetolactate decarboxylase CYG41_RS09900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG41_RS09900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG41_RS09900 PF00205 Thiamine pyrophosphate enzyme, central domain CYG41_RS09940 PF00471 Ribosomal protein L33 CYG41_RS09945 PF13784 Fic/DOC family N-terminal CYG41_RS09945 PF02661 Fic/DOC family CYG41_RS09950 PF00849 RNA pseudouridylate synthase CYG41_RS09950 PF01479 S4 domain CYG41_RS09970 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CYG41_RS09975 PF00392 Bacterial regulatory proteins, gntR family CYG41_RS09975 PF07729 FCD domain CYG41_RS09980 PF00364 Biotin-requiring enzyme CYG41_RS09980 PF00682 HMGL-like CYG41_RS09980 PF02436 Conserved carboxylase domain CYG41_RS09985 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CYG41_RS09990 PF04223 Citrate lyase, alpha subunit (CitF) CYG41_RS09995 PF03328 HpcH/HpaI aldolase/citrate lyase family CYG41_RS10000 PF06857 Malonate decarboxylase delta subunit (MdcD) CYG41_RS10005 PF08218 Citrate lyase ligase C-terminal domain CYG41_RS10020 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit CYG41_RS10025 PF00364 Biotin-requiring enzyme CYG41_RS10035 PF03600 Citrate transporter CYG41_RS10045 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family CYG41_RS10070 PF00881 Nitroreductase family CYG41_RS10075 PF00005 ABC transporter CYG41_RS10075 PF13732 Domain of unknown function (DUF4162) CYG41_RS10085 PF17932 Tetracyclin repressor-like, C-terminal domain CYG41_RS10085 PF00440 Bacterial regulatory proteins, tetR family CYG41_RS10090 PF07690 Major Facilitator Superfamily CYG41_RS10115 PF07702 UTRA domain CYG41_RS10115 PF00392 Bacterial regulatory proteins, gntR family CYG41_RS10120 PF00005 ABC transporter CYG41_RS10130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG41_RS10130 PF00005 ABC transporter CYG41_RS10135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG41_RS10135 PF00005 ABC transporter CYG41_RS10145 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS10145 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG41_RS10150 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS10155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG41_RS10170 PF00664 ABC transporter transmembrane region CYG41_RS10170 PF00005 ABC transporter CYG41_RS10175 PF00005 ABC transporter CYG41_RS10195 PF00413 Matrixin CYG41_RS10280 PF02540 NAD synthase CYG41_RS10280 PF00958 GMP synthase C terminal domain CYG41_RS10280 PF00117 Glutamine amidotransferase class-I CYG41_RS10285 PF00485 Phosphoribulokinase / Uridine kinase family CYG41_RS10300 PF03577 Peptidase family C69 CYG41_RS10305 PF03061 Thioesterase superfamily CYG41_RS10310 PF13538 UvrD-like helicase C-terminal domain CYG41_RS10330 PF02254 TrkA-N domain CYG41_RS10330 PF02080 TrkA-C domain CYG41_RS10330 PF00999 Sodium/hydrogen exchanger family CYG41_RS10335 PF00561 alpha/beta hydrolase fold CYG41_RS10345 PF01566 Natural resistance-associated macrophage protein CYG41_RS10350 PF00762 Ferrochelatase CYG41_RS10355 PF00300 Histidine phosphatase superfamily (branch 1) CYG41_RS10360 PF00596 Class II Aldolase and Adducin N-terminal domain CYG41_RS10370 PF00005 ABC transporter CYG41_RS10375 PF13520 Amino acid permease CYG41_RS10380 PF00781 Diacylglycerol kinase catalytic domain CYG41_RS10385 PF01926 50S ribosome-binding GTPase CYG41_RS10385 PF13167 GTP-binding GTPase N-terminal CYG41_RS10385 PF16360 GTP-binding GTPase Middle Region CYG41_RS10390 PF01522 Polysaccharide deacetylase CYG41_RS10390 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CYG41_RS10415 PF04321 RmlD substrate binding domain CYG41_RS10420 PF16363 GDP-mannose 4,6 dehydratase CYG41_RS10425 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CYG41_RS10430 PF00483 Nucleotidyl transferase CYG41_RS10455 PF02397 Bacterial sugar transferase CYG41_RS10460 PF01370 NAD dependent epimerase/dehydratase family CYG41_RS10470 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS10475 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS10480 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG41_RS10485 PF00005 ABC transporter CYG41_RS10500 PF01475 Ferric uptake regulator family CYG41_RS10510 PF00625 Guanylate kinase CYG41_RS10515 PF00583 Acetyltransferase (GNAT) family CYG41_RS10515 PF13508 Acetyltransferase (GNAT) domain CYG41_RS10520 PF00877 NlpC/P60 family CYG41_RS10525 PF01479 S4 domain CYG41_RS10525 PF00579 tRNA synthetases class I (W and Y) CYG41_RS10540 PF02424 ApbE family CYG41_RS10545 PF00128 Alpha amylase, catalytic domain CYG41_RS10545 PF02903 Alpha amylase, N-terminal ig-like domain CYG41_RS10550 PF00343 Carbohydrate phosphorylase CYG41_RS10555 PF00534 Glycosyl transferases group 1 CYG41_RS10555 PF08323 Starch synthase catalytic domain CYG41_RS10560 PF00483 Nucleotidyl transferase CYG41_RS10565 PF00483 Nucleotidyl transferase CYG41_RS10570 PF00128 Alpha amylase, catalytic domain CYG41_RS10570 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CYG41_RS10570 PF02806 Alpha amylase, C-terminal all-beta domain CYG41_RS10575 PF01063 Amino-transferase class IV CYG41_RS10585 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CYG41_RS10585 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CYG41_RS10590 PF06874 Firmicute fructose-1,6-bisphosphatase CYG41_RS10600 PF03960 ArsC family CYG41_RS10605 PF10431 C-terminal, D2-small domain, of ClpB protein CYG41_RS10605 PF00004 ATPase family associated with various cellular activities (AAA) CYG41_RS10605 PF07724 AAA domain (Cdc48 subfamily) CYG41_RS10605 PF17871 AAA lid domain CYG41_RS10620 PF03816 Cell envelope-related transcriptional attenuator domain CYG41_RS10625 PF16363 GDP-mannose 4,6 dehydratase CYG41_RS10630 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CYG41_RS10650 PF02397 Bacterial sugar transferase CYG41_RS10665 PF00535 Glycosyl transferase family 2 CYG41_RS10670 PF13579 Glycosyl transferase 4-like domain CYG41_RS10670 PF00534 Glycosyl transferases group 1 CYG41_RS10680 PF14667 Polysaccharide biosynthesis C-terminal domain CYG41_RS10680 PF01943 Polysaccharide biosynthesis protein CYG41_RS10685 PF03275 UDP-galactopyranose mutase CYG41_RS10695 PF13614 AAA domain CYG41_RS10700 PF02706 Chain length determinant protein CYG41_RS10720 PF06177 QueT transporter CYG41_RS10745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG41_RS10745 PF00005 ABC transporter CYG41_RS10750 PF00005 ABC transporter CYG41_RS10750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CYG41_RS10755 PF12911 N-terminal TM domain of oligopeptide transport permease C CYG41_RS10755 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS10760 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS10765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG41_RS10770 PF07690 Major Facilitator Superfamily CYG41_RS10775 PF01132 Elongation factor P (EF-P) OB domain CYG41_RS10775 PF08207 Elongation factor P (EF-P) KOW-like domain CYG41_RS10775 PF09285 Elongation factor P, C-terminal CYG41_RS10780 PF02589 LUD domain CYG41_RS10785 PF13183 4Fe-4S dicluster domain CYG41_RS10785 PF02589 LUD domain CYG41_RS10785 PF11870 Domain of unknown function (DUF3390) CYG41_RS10790 PF02754 Cysteine-rich domain CYG41_RS10805 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CYG41_RS10820 PF02378 Phosphotransferase system, EIIC CYG41_RS10825 PF16874 Glycosyl hydrolase family 36 C-terminal domain CYG41_RS10825 PF16875 Glycosyl hydrolase family 36 N-terminal domain CYG41_RS10830 PF03883 Peroxide stress protein YaaA CYG41_RS10860 PF00294 pfkB family carbohydrate kinase CYG41_RS10955 PF00128 Alpha amylase, catalytic domain CYG41_RS10955 PF16657 Maltogenic Amylase, C-terminal domain CYG41_RS10960 PF00356 Bacterial regulatory proteins, lacI family CYG41_RS10965 PF00251 Glycosyl hydrolases family 32 N-terminal domain CYG41_RS10965 PF08244 Glycosyl hydrolases family 32 C terminal CYG41_RS10970 PF05368 NmrA-like family CYG41_RS10980 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CYG41_RS10990 PF17848 Acetyl-coA carboxylase zinc finger domain CYG41_RS10990 PF01039 Carboxyl transferase domain CYG41_RS10995 PF02785 Biotin carboxylase C-terminal domain CYG41_RS10995 PF00289 Biotin carboxylase, N-terminal domain CYG41_RS10995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CYG41_RS11000 PF07977 FabA-like domain CYG41_RS11005 PF00364 Biotin-requiring enzyme CYG41_RS11010 PF02801 Beta-ketoacyl synthase, C-terminal domain CYG41_RS11010 PF00109 Beta-ketoacyl synthase, N-terminal domain CYG41_RS11025 PF03060 Nitronate monooxygenase CYG41_RS11030 PF00550 Phosphopantetheine attachment site CYG41_RS11035 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CYG41_RS11035 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CYG41_RS11045 PF07977 FabA-like domain CYG41_RS11060 PF00465 Iron-containing alcohol dehydrogenase CYG41_RS11100 PF01047 MarR family CYG41_RS11105 PF00293 NUDIX domain CYG41_RS11110 PF00300 Histidine phosphatase superfamily (branch 1) CYG41_RS11125 PF00144 Beta-lactamase CYG41_RS11130 PF01594 AI-2E family transporter CYG41_RS11135 PF04203 Sortase domain CYG41_RS11140 PF04138 GtrA-like protein CYG41_RS11145 PF00205 Thiamine pyrophosphate enzyme, central domain CYG41_RS11145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CYG41_RS11145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CYG41_RS11150 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CYG41_RS11155 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS11160 PF00005 ABC transporter CYG41_RS11160 PF00571 CBS domain CYG41_RS11165 PF03749 Sugar fermentation stimulation protein RE domain CYG41_RS11165 PF17746 SfsA N-terminal OB domain CYG41_RS11190 PF08544 GHMP kinases C terminal CYG41_RS11190 PF00288 GHMP kinases N terminal domain CYG41_RS11195 PF14821 Threonine synthase N terminus CYG41_RS11195 PF00291 Pyridoxal-phosphate dependent enzyme CYG41_RS11200 PF03447 Homoserine dehydrogenase, NAD binding domain CYG41_RS11200 PF00742 Homoserine dehydrogenase CYG41_RS11200 PF01842 ACT domain CYG41_RS11205 PF00696 Amino acid kinase family CYG41_RS11205 PF13840 ACT domain CYG41_RS11210 PF15975 Flotillin CYG41_RS11210 PF01145 SPFH domain / Band 7 family CYG41_RS11235 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYG41_RS11235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CYG41_RS11240 PF00155 Aminotransferase class I and II CYG41_RS11255 PF01987 Mitochondrial biogenesis AIM24 CYG41_RS11260 PF12697 Alpha/beta hydrolase family CYG41_RS11290 PF00733 Asparagine synthase CYG41_RS11290 PF13537 Glutamine amidotransferase domain CYG41_RS11325 PF00348 Polyprenyl synthetase CYG41_RS11330 PF00871 Acetokinase family CYG41_RS11335 PF13732 Domain of unknown function (DUF4162) CYG41_RS11335 PF00005 ABC transporter CYG41_RS11350 PF00005 ABC transporter CYG41_RS11370 PF00367 phosphotransferase system, EIIB CYG41_RS11370 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CYG41_RS11370 PF02378 Phosphotransferase system, EIIC CYG41_RS11380 PF03123 CAT RNA binding domain CYG41_RS11380 PF00874 PRD domain CYG41_RS11385 PF00005 ABC transporter CYG41_RS11385 PF00664 ABC transporter transmembrane region CYG41_RS11390 PF00664 ABC transporter transmembrane region CYG41_RS11390 PF00005 ABC transporter CYG41_RS11415 PF09827 CRISPR associated protein Cas2 CYG41_RS11420 PF01867 CRISPR associated protein Cas1 CYG41_RS11425 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 CYG41_RS11425 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 CYG41_RS11425 PF13395 HNH endonuclease CYG41_RS11425 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 CYG41_RS11430 PF00664 ABC transporter transmembrane region CYG41_RS11430 PF00005 ABC transporter CYG41_RS11435 PF00664 ABC transporter transmembrane region CYG41_RS11435 PF00005 ABC transporter CYG41_RS11440 PF02322 Cytochrome bd terminal oxidase subunit II CYG41_RS11445 PF01654 Cytochrome bd terminal oxidase subunit I CYG41_RS11450 PF02885 Glycosyl transferase family, helical bundle domain CYG41_RS11450 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CYG41_RS11450 PF00591 Glycosyl transferase family, a/b domain CYG41_RS11455 PF00962 Adenosine/AMP deaminase CYG41_RS11475 PF00892 EamA-like transporter family CYG41_RS11480 PF00117 Glutamine amidotransferase class-I CYG41_RS11480 PF03352 Methyladenine glycosylase CYG41_RS11480 PF13302 Acetyltransferase (GNAT) domain CYG41_RS11480 PF13673 Acetyltransferase (GNAT) domain CYG41_RS11480 PF00958 GMP synthase C terminal domain CYG41_RS11490 PF00582 Universal stress protein family CYG41_RS11505 PF13350 Tyrosine phosphatase family CYG41_RS11510 PF08331 Domain of unknown function (DUF1730) CYG41_RS11520 PF02632 BioY family CYG41_RS11550 PF03471 Transporter associated domain CYG41_RS11550 PF01595 Cyclin M transmembrane N-terminal domain CYG41_RS11550 PF00571 CBS domain CYG41_RS11565 PF07690 Major Facilitator Superfamily CYG41_RS11575 PF02545 Maf-like protein CYG41_RS11580 PF01119 DNA mismatch repair protein, C-terminal domain CYG41_RS11580 PF08676 MutL C terminal dimerisation domain CYG41_RS11585 PF00488 MutS domain V CYG41_RS11585 PF05190 MutS family domain IV CYG41_RS11585 PF05192 MutS domain III CYG41_RS11585 PF05188 MutS domain II CYG41_RS11585 PF01624 MutS domain I CYG41_RS11595 PF13520 Amino acid permease CYG41_RS11605 PF00118 TCP-1/cpn60 chaperonin family CYG41_RS11610 PF00166 Chaperonin 10 Kd subunit CYG41_RS11615 PF02517 CPBP intramembrane metalloprotease CYG41_RS11620 PF03816 Cell envelope-related transcriptional attenuator domain CYG41_RS11635 PF00005 ABC transporter CYG41_RS11640 PF00392 Bacterial regulatory proteins, gntR family CYG41_RS11645 PF06971 Putative DNA-binding protein N-terminus CYG41_RS11645 PF02629 CoA binding domain CYG41_RS11650 PF12848 ABC transporter CYG41_RS11650 PF16326 ABC transporter C-terminal domain CYG41_RS11650 PF00005 ABC transporter CYG41_RS11655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS11660 PF00814 Glycoprotease family CYG41_RS11665 PF00583 Acetyltransferase (GNAT) family CYG41_RS11665 PF00814 Glycoprotease family CYG41_RS11670 PF00814 Glycoprotease family CYG41_RS11690 PF12822 ECF transporter, substrate-specific component CYG41_RS11695 PF17763 Glutaminase/Asparaginase C-terminal domain CYG41_RS11695 PF00710 Asparaginase, N-terminal CYG41_RS11705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CYG41_RS11710 PF06156 Initiation control protein YabA CYG41_RS11715 PF09115 DNA polymerase III, delta subunit, C terminal CYG41_RS11720 PF06153 Cyclic-di-AMP receptor CYG41_RS11725 PF02223 Thymidylate kinase CYG41_RS11735 PF02132 RecR protein CYG41_RS11735 PF13662 Toprim domain CYG41_RS11740 PF02575 YbaB/EbfC DNA-binding family CYG41_RS11745 PF12169 DNA polymerase III subunits gamma and tau domain III CYG41_RS11755 PF14437 MafB19-like deaminase CYG41_RS11765 PF05175 Methyltransferase small domain CYG41_RS11770 PF09924 Uncharacterised conserved protein (DUF2156) CYG41_RS11770 PF03706 Lysylphosphatidylglycerol synthase TM region CYG41_RS11790 PF00356 Bacterial regulatory proteins, lacI family CYG41_RS11790 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CYG41_RS11795 PF00082 Subtilase family CYG41_RS11795 PF02225 PA domain CYG41_RS11795 PF00746 LPXTG cell wall anchor motif CYG41_RS11795 PF06280 Fn3-like domain CYG41_RS11800 PF00639 PPIC-type PPIASE domain CYG41_RS11805 PF16320 Ribosomal protein L7/L12 dimerisation domain CYG41_RS11805 PF00542 Ribosomal protein L7/L12 C-terminal domain CYG41_RS11810 PF00466 Ribosomal protein L10 CYG41_RS11815 PF07690 Major Facilitator Superfamily CYG41_RS11835 PF07690 Major Facilitator Superfamily CYG41_RS11845 PF18652 Adhesin P1 N-terminal domain CYG41_RS11845 PF08363 Glucan-binding protein C CYG41_RS11845 PF00746 LPXTG cell wall anchor motif CYG41_RS11845 PF17998 Cell surface antigen I/II C2 terminal domain CYG41_RS11845 PF16364 Cell surface antigen C-terminus CYG41_RS11850 PF00534 Glycosyl transferases group 1 CYG41_RS11850 PF13439 Glycosyltransferase Family 4 CYG41_RS11855 PF00534 Glycosyl transferases group 1 CYG41_RS11860 PF00171 Aldehyde dehydrogenase family CYG41_RS11870 PF00687 Ribosomal protein L1p/L10e family CYG41_RS11875 PF00298 Ribosomal protein L11, RNA binding domain CYG41_RS11875 PF03946 Ribosomal protein L11, N-terminal domain CYG41_RS11880 PF00689 Cation transporting ATPase, C-terminus CYG41_RS11880 PF00690 Cation transporter/ATPase, N-terminus CYG41_RS11885 PF01425 Amidase CYG41_RS11890 PF01923 Cobalamin adenosyltransferase CYG41_RS11905 PF17975 Ribonucleotide reductase alpha domain CYG41_RS11920 PF00467 KOW motif CYG41_RS11920 PF02357 Transcription termination factor nusG CYG41_RS11930 PF00471 Ribosomal protein L33 CYG41_RS11950 PF02424 ApbE family CYG41_RS11970 PF04205 FMN-binding domain CYG41_RS11990 PF00348 Polyprenyl synthetase CYG41_RS12025 PF00005 ABC transporter CYG41_RS12050 PF05991 YacP-like NYN domain CYG41_RS12055 PF08032 RNA 2'-O ribose methyltransferase substrate binding CYG41_RS12055 PF00588 SpoU rRNA Methylase family CYG41_RS12060 PF00636 Ribonuclease III domain CYG41_RS12065 PF01406 tRNA synthetases class I (C) catalytic domain CYG41_RS12065 PF09190 DALR domain CYG41_RS12070 PF01381 Helix-turn-helix CYG41_RS12090 PF00749 tRNA synthetases class I (E and Q), catalytic domain CYG41_RS12100 PF10086 YhfC intramembrane metalloprotease CYG41_RS12110 PF00392 Bacterial regulatory proteins, gntR family CYG41_RS12110 PF00155 Aminotransferase class I and II CYG41_RS12115 PF00005 ABC transporter CYG41_RS12120 PF00746 LPXTG cell wall anchor motif CYG41_RS12120 PF06458 MucBP domain CYG41_RS12120 PF04650 YSIRK type signal peptide CYG41_RS12135 PF18073 Rubredoxin metal binding domain CYG41_RS12140 PF00692 dUTPase CYG41_RS12155 PF14542 GCN5-related N-acetyl-transferase CYG41_RS12165 PF03051 Peptidase C1-like family CYG41_RS12170 PF03051 Peptidase C1-like family CYG41_RS12185 PF00005 ABC transporter CYG41_RS12190 PF02705 K+ potassium transporter CYG41_RS12195 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CYG41_RS12195 PF02896 PEP-utilising enzyme, TIM barrel domain CYG41_RS12195 PF00391 PEP-utilising enzyme, mobile domain CYG41_RS12200 PF08279 HTH domain CYG41_RS12200 PF00571 CBS domain CYG41_RS12205 PF00300 Histidine phosphatase superfamily (branch 1) CYG41_RS12220 PF01070 FMN-dependent dehydrogenase CYG41_RS12260 PF00171 Aldehyde dehydrogenase family CYG41_RS12265 PF00696 Amino acid kinase family CYG41_RS12320 PF03551 Transcriptional regulator PadR-like family CYG41_RS12340 PF00248 Aldo/keto reductase family CYG41_RS12365 PF00005 ABC transporter CYG41_RS12365 PF03412 Peptidase C39 family CYG41_RS12365 PF00664 ABC transporter transmembrane region CYG41_RS12380 PF04397 LytTr DNA-binding domain CYG41_RS12380 PF00072 Response regulator receiver domain CYG41_RS12450 PF07690 Major Facilitator Superfamily CYG41_RS12465 PF00248 Aldo/keto reductase family CYG41_RS12475 PF00106 short chain dehydrogenase CYG41_RS12480 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CYG41_RS12490 PF10415 Fumarase C C-terminus CYG41_RS12490 PF00206 Lyase CYG41_RS12515 PF01566 Natural resistance-associated macrophage protein CYG41_RS12520 PF00689 Cation transporting ATPase, C-terminus CYG41_RS12520 PF00690 Cation transporter/ATPase, N-terminus CYG41_RS12530 PF07690 Major Facilitator Superfamily CYG41_RS12535 PF07732 Multicopper oxidase CYG41_RS12535 PF07731 Multicopper oxidase CYG41_RS12550 PF01022 Bacterial regulatory protein, arsR family CYG41_RS12555 PF01297 Zinc-uptake complex component A periplasmic CYG41_RS12560 PF00950 ABC 3 transport family CYG41_RS12565 PF00005 ABC transporter CYG41_RS12570 PF00253 Ribosomal protein S14p/S29e CYG41_RS12595 PF01297 Zinc-uptake complex component A periplasmic CYG41_RS12620 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CYG41_RS12625 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CYG41_RS12650 PF00501 AMP-binding enzyme CYG41_RS12650 PF13193 AMP-binding enzyme C-terminal domain CYG41_RS12660 PF00005 ABC transporter CYG41_RS12665 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS12685 PF00005 ABC transporter CYG41_RS12690 PF00005 ABC transporter CYG41_RS12700 PF13333 Integrase core domain CYG41_RS12700 PF00665 Integrase core domain CYG41_RS12700 PF13276 HTH-like domain CYG41_RS12705 PF01527 Transposase CYG41_RS12710 PF00380 Ribosomal protein S9/S16 CYG41_RS12715 PF00572 Ribosomal protein L13 CYG41_RS12730 PF00005 ABC transporter CYG41_RS12750 PF07739 TipAS antibiotic-recognition domain CYG41_RS12750 PF13411 MerR HTH family regulatory protein CYG41_RS12755 PF01416 tRNA pseudouridine synthase CYG41_RS12760 PF02361 Cobalt transport protein CYG41_RS12765 PF00005 ABC transporter CYG41_RS12770 PF00005 ABC transporter CYG41_RS12780 PF01196 Ribosomal protein L17 CYG41_RS12785 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CYG41_RS12785 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CYG41_RS12785 PF01000 RNA polymerase Rpb3/RpoA insert domain CYG41_RS12790 PF00411 Ribosomal protein S11 CYG41_RS12795 PF00416 Ribosomal protein S13/S18 CYG41_RS12800 PF00444 Ribosomal protein L36 CYG41_RS12805 PF01176 Translation initiation factor 1A / IF-1 CYG41_RS12810 PF05191 Adenylate kinase, active site lid CYG41_RS12815 PF00344 SecY translocase CYG41_RS12820 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CYG41_RS12825 PF00327 Ribosomal protein L30p/L7e CYG41_RS12830 PF00333 Ribosomal protein S5, N-terminal domain CYG41_RS12830 PF03719 Ribosomal protein S5, C-terminal domain CYG41_RS12835 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CYG41_RS12840 PF00347 Ribosomal protein L6 CYG41_RS12845 PF00410 Ribosomal protein S8 CYG41_RS12850 PF00253 Ribosomal protein S14p/S29e CYG41_RS12855 PF00673 ribosomal L5P family C-terminus CYG41_RS12855 PF00281 Ribosomal protein L5 CYG41_RS12860 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CYG41_RS12860 PF00467 KOW motif CYG41_RS12865 PF00238 Ribosomal protein L14p/L23e CYG41_RS12870 PF00366 Ribosomal protein S17 CYG41_RS12875 PF00831 Ribosomal L29 protein CYG41_RS12880 PF00252 Ribosomal protein L16p/L10e CYG41_RS12885 PF00189 Ribosomal protein S3, C-terminal domain CYG41_RS12885 PF07650 KH domain CYG41_RS12890 PF00237 Ribosomal protein L22p/L17e CYG41_RS12895 PF00203 Ribosomal protein S19 CYG41_RS12900 PF00181 Ribosomal Proteins L2, RNA binding domain CYG41_RS12900 PF03947 Ribosomal Proteins L2, C-terminal domain CYG41_RS12905 PF00276 Ribosomal protein L23 CYG41_RS12910 PF00573 Ribosomal protein L4/L1 family CYG41_RS12915 PF00297 Ribosomal protein L3 CYG41_RS12920 PF00338 Ribosomal protein S10p/S20e CYG41_RS12930 PF00578 AhpC/TSA family CYG41_RS12945 PF03764 Elongation factor G, domain IV CYG41_RS12945 PF00009 Elongation factor Tu GTP binding domain CYG41_RS12945 PF03144 Elongation factor Tu domain 2 CYG41_RS12945 PF14492 Elongation Factor G, domain II CYG41_RS12945 PF00679 Elongation factor G C-terminus CYG41_RS12950 PF00177 Ribosomal protein S7p/S5e CYG41_RS12955 PF00164 Ribosomal protein S12/S23 CYG41_RS12970 PF04997 RNA polymerase Rpb1, domain 1 CYG41_RS12970 PF00623 RNA polymerase Rpb1, domain 2 CYG41_RS12970 PF04983 RNA polymerase Rpb1, domain 3 CYG41_RS12970 PF05000 RNA polymerase Rpb1, domain 4 CYG41_RS12970 PF04998 RNA polymerase Rpb1, domain 5 CYG41_RS12975 PF04561 RNA polymerase Rpb2, domain 2 CYG41_RS12975 PF00562 RNA polymerase Rpb2, domain 6 CYG41_RS12975 PF10385 RNA polymerase beta subunit external 1 domain CYG41_RS12975 PF04565 RNA polymerase Rpb2, domain 3 CYG41_RS12975 PF04563 RNA polymerase beta subunit CYG41_RS12975 PF04560 RNA polymerase Rpb2, domain 7 CYG41_RS12980 PF00004 ATPase family associated with various cellular activities (AAA) CYG41_RS12980 PF07724 AAA domain (Cdc48 subfamily) CYG41_RS12980 PF17871 AAA lid domain CYG41_RS12980 PF02861 Clp amino terminal domain, pathogenicity island component CYG41_RS12980 PF10431 C-terminal, D2-small domain, of ClpB protein CYG41_RS12985 PF05848 CtsR N-terminal HTH domain CYG41_RS12985 PF17727 CtsR C-terminal dimerization domain CYG41_RS13055 PF00152 tRNA synthetases class II (D, K and N) CYG41_RS13055 PF01336 OB-fold nucleic acid binding domain CYG41_RS13060 PF01207 Dihydrouridine synthase (Dus) CYG41_RS13065 PF01430 Hsp33 protein CYG41_RS13080 PF06480 FtsH Extracellular CYG41_RS13080 PF17862 AAA+ lid domain CYG41_RS13080 PF00004 ATPase family associated with various cellular activities (AAA) CYG41_RS13080 PF01434 Peptidase family M41 CYG41_RS13085 PF00156 Phosphoribosyl transferase domain CYG41_RS13090 PF11734 TilS substrate C-terminal domain CYG41_RS13090 PF01171 PP-loop family CYG41_RS13095 PF00575 S1 RNA binding domain CYG41_RS13105 PF01479 S4 domain CYG41_RS13110 PF01943 Polysaccharide biosynthesis protein CYG41_RS13110 PF14667 Polysaccharide biosynthesis C-terminal domain CYG41_RS13115 PF17757 UvrB interaction domain CYG41_RS13115 PF03461 TRCF domain CYG41_RS13115 PF00271 Helicase conserved C-terminal domain CYG41_RS13115 PF00270 DEAD/DEAH box helicase CYG41_RS13115 PF02559 CarD-like/TRCF domain CYG41_RS13120 PF01195 Peptidyl-tRNA hydrolase CYG41_RS13125 PF00056 lactate/malate dehydrogenase, NAD binding domain CYG41_RS13125 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CYG41_RS13155 PF03734 L,D-transpeptidase catalytic domain CYG41_RS13160 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CYG41_RS13160 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG41_RS13165 PF00310 Glutamine amidotransferases class-II CYG41_RS13165 PF04898 Glutamate synthase central domain CYG41_RS13165 PF01645 Conserved region in glutamate synthase CYG41_RS13165 PF01493 GXGXG motif CYG41_RS13170 PF06177 QueT transporter CYG41_RS13185 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CYG41_RS13195 PF01168 Alanine racemase, N-terminal domain CYG41_RS13195 PF00842 Alanine racemase, C-terminal domain CYG41_RS13200 PF01648 4'-phosphopantetheinyl transferase superfamily CYG41_RS13205 PF00270 DEAD/DEAH box helicase CYG41_RS13205 PF00271 Helicase conserved C-terminal domain CYG41_RS13210 PF08245 Mur ligase middle domain CYG41_RS13210 PF01225 Mur ligase family, catalytic domain CYG41_RS13210 PF02875 Mur ligase family, glutamate ligase domain CYG41_RS13235 PF01197 Ribosomal protein L31 CYG41_RS13240 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CYG41_RS13250 PF06418 CTP synthase N-terminus CYG41_RS13250 PF00117 Glutamine amidotransferase class-I CYG41_RS13255 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG41_RS13270 PF06736 Protein of unknown function (DUF1211) CYG41_RS13275 PF05066 HB1, ASXL, restriction endonuclease HTH domain CYG41_RS13290 PF03099 Biotin/lipoate A/B protein ligase family CYG41_RS13295 PF01966 HD domain CYG41_RS13300 PF00293 NUDIX domain CYG41_RS13300 PF13344 Haloacid dehalogenase-like hydrolase CYG41_RS13310 PF01741 Large-conductance mechanosensitive channel, MscL CYG41_RS13325 PF14572 Phosphoribosyl synthetase-associated domain CYG41_RS13325 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CYG41_RS13330 PF00132 Bacterial transferase hexapeptide (six repeats) CYG41_RS13330 PF00483 Nucleotidyl transferase CYG41_RS13350 PF09182 Bacterial purine repressor, N-terminal CYG41_RS13350 PF00156 Phosphoribosyl transferase domain CYG41_RS13355 PF00005 ABC transporter CYG41_RS13360 PF03649 Uncharacterised protein family (UPF0014) CYG41_RS13365 PF01545 Cation efflux family CYG41_RS13370 PF00288 GHMP kinases N terminal domain CYG41_RS13370 PF08544 GHMP kinases C terminal CYG41_RS13375 PF06257 Biofilm formation stimulator VEG CYG41_RS13390 PF00398 Ribosomal RNA adenine dimethylase CYG41_RS13395 PF13331 Domain of unknown function (DUF4093) CYG41_RS13400 PF01026 TatD related DNase CYG41_RS13410 PF01791 DeoC/LacD family aldolase CYG41_RS13430 PF04397 LytTr DNA-binding domain CYG41_RS13430 PF00072 Response regulator receiver domain CYG41_RS13435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG41_RS13435 PF00989 PAS fold CYG41_RS13435 PF17203 Single cache domain 3 CYG41_RS13435 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CYG41_RS13440 PF00005 ABC transporter CYG41_RS13440 PF00664 ABC transporter transmembrane region CYG41_RS13445 PF00664 ABC transporter transmembrane region CYG41_RS13445 PF00005 ABC transporter CYG41_RS13460 PF08264 Anticodon-binding domain of tRNA CYG41_RS13460 PF09334 tRNA synthetases class I (M) CYG41_RS13460 PF01588 Putative tRNA binding domain CYG41_RS13475 PF00561 alpha/beta hydrolase fold CYG41_RS13490 PF01904 Protein of unknown function DUF72 CYG41_RS13500 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CYG41_RS13500 PF00056 lactate/malate dehydrogenase, NAD binding domain CYG41_RS13505 PF06736 Protein of unknown function (DUF1211) CYG41_RS13510 PF02146 Sir2 family CYG41_RS13525 PF01161 Phosphatidylethanolamine-binding protein CYG41_RS13535 PF06207 Protein of unknown function (DUF1002) CYG41_RS13540 PF02541 Ppx/GppA phosphatase family CYG41_RS13545 PF17941 Polyphosphate kinase C-terminal domain 1 CYG41_RS13545 PF13089 Polyphosphate kinase N-terminal domain CYG41_RS13545 PF13090 Polyphosphate kinase C-terminal domain 2 CYG41_RS13545 PF02503 Polyphosphate kinase middle domain CYG41_RS13555 PF00248 Aldo/keto reductase family CYG41_RS13560 PF01209 ubiE/COQ5 methyltransferase family CYG41_RS13570 PF01554 MatE CYG41_RS13580 PF04536 TPM domain CYG41_RS13585 PF04011 LemA family CYG41_RS13590 PF00579 tRNA synthetases class I (W and Y) CYG41_RS13610 PF00005 ABC transporter CYG41_RS13620 PF07992 Pyridine nucleotide-disulphide oxidoreductase CYG41_RS13620 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYG41_RS13625 PF00571 CBS domain CYG41_RS13625 PF00005 ABC transporter CYG41_RS13630 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS13645 PF13538 UvrD-like helicase C-terminal domain CYG41_RS13650 PF03466 LysR substrate binding domain CYG41_RS13650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG41_RS13675 PF00005 ABC transporter CYG41_RS13695 PF00005 ABC transporter CYG41_RS13695 PF00664 ABC transporter transmembrane region CYG41_RS13700 PF01966 HD domain CYG41_RS13710 PF00005 ABC transporter CYG41_RS13710 PF17755 UvrA DNA-binding domain CYG41_RS13710 PF17760 UvrA interaction domain CYG41_RS13715 PF00248 Aldo/keto reductase family CYG41_RS13740 PF00300 Histidine phosphatase superfamily (branch 1) CYG41_RS13750 PF00075 RNase H CYG41_RS13755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CYG41_RS13755 PF03466 LysR substrate binding domain CYG41_RS13760 PF00155 Aminotransferase class I and II CYG41_RS13780 PF00154 recA bacterial DNA recombination protein CYG41_RS13785 PF04474 Protein of unknown function (DUF554) CYG41_RS13800 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS13800 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYG41_RS13805 PF00294 pfkB family carbohydrate kinase CYG41_RS13815 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYG41_RS13815 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYG41_RS13835 PF03610 PTS system fructose IIA component CYG41_RS13835 PF03830 PTS system sorbose subfamily IIB component CYG41_RS13840 PF03609 PTS system sorbose-specific iic component CYG41_RS13845 PF03613 PTS system mannose/fructose/sorbose family IID component CYG41_RS13850 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CYG41_RS13855 PF02441 Flavoprotein CYG41_RS13880 PF07690 Major Facilitator Superfamily CYG41_RS13890 PF13378 Enolase C-terminal domain-like CYG41_RS13890 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CYG41_RS13895 PF03611 PTS system sugar-specific permease component CYG41_RS13900 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS13905 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYG41_RS13910 PF01081 KDPG and KHG aldolase CYG41_RS13920 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CYG41_RS13925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS13930 PF00232 Glycosyl hydrolase family 1 CYG41_RS13935 PF00480 ROK family CYG41_RS13960 PF02378 Phosphotransferase system, EIIC CYG41_RS13965 PF00392 Bacterial regulatory proteins, gntR family CYG41_RS13965 PF07702 UTRA domain CYG41_RS13980 PF05025 RbsD / FucU transport protein family CYG41_RS13985 PF00083 Sugar (and other) transporter CYG41_RS13990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYG41_RS13990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYG41_RS13995 PF07881 L-fucose isomerase, first N-terminal domain CYG41_RS13995 PF02952 L-fucose isomerase, C-terminal domain CYG41_RS13995 PF07882 L-fucose isomerase, second N-terminal domain CYG41_RS14000 PF00596 Class II Aldolase and Adducin N-terminal domain CYG41_RS14005 PF06134 L-rhamnose isomerase (RhaA) CYG41_RS14010 PF05336 L-rhamnose mutarotase CYG41_RS14015 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYG41_RS14015 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYG41_RS14020 PF07690 Major Facilitator Superfamily CYG41_RS14030 PF08240 Alcohol dehydrogenase GroES-like domain CYG41_RS14030 PF00107 Zinc-binding dehydrogenase CYG41_RS14045 PF00128 Alpha amylase, catalytic domain CYG41_RS14050 PF13276 HTH-like domain CYG41_RS14050 PF13333 Integrase core domain CYG41_RS14050 PF00665 Integrase core domain CYG41_RS14055 PF01527 Transposase CYG41_RS14060 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CYG41_RS14070 PF11975 Family 4 glycosyl hydrolase C-terminal domain CYG41_RS14070 PF02056 Family 4 glycosyl hydrolase CYG41_RS14075 PF00367 phosphotransferase system, EIIB CYG41_RS14075 PF02378 Phosphotransferase system, EIIC CYG41_RS14090 PF02378 Phosphotransferase system, EIIC CYG41_RS14090 PF00367 phosphotransferase system, EIIB CYG41_RS14090 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CYG41_RS14100 PF07071 KDGP aldolase CYG41_RS14105 PF03841 L-seryl-tRNA selenium transferase CYG41_RS14110 PF01979 Amidohydrolase family CYG41_RS14145 PF00923 Transaldolase/Fructose-6-phosphate aldolase CYG41_RS14155 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CYG41_RS14155 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CYG41_RS14160 PF03608 PTS system enzyme II sorbitol-specific factor CYG41_RS14170 PF08279 HTH domain CYG41_RS14170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYG41_RS14170 PF00874 PRD domain CYG41_RS14170 PF05043 Mga helix-turn-helix domain CYG41_RS14175 PF00106 short chain dehydrogenase CYG41_RS14180 PF00596 Class II Aldolase and Adducin N-terminal domain CYG41_RS14190 PF01261 Xylose isomerase-like TIM barrel CYG41_RS14205 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CYG41_RS14220 PF03611 PTS system sugar-specific permease component CYG41_RS14225 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYG41_RS14235 PF00082 Subtilase family CYG41_RS14235 PF06280 Fn3-like domain CYG41_RS14235 PF02225 PA domain CYG41_RS14235 PF00746 LPXTG cell wall anchor motif CYG41_RS14245 PF00480 ROK family CYG41_RS14250 PF01112 Asparaginase CYG41_RS14255 PF01546 Peptidase family M20/M25/M40 CYG41_RS14260 PF00392 Bacterial regulatory proteins, gntR family CYG41_RS14260 PF07702 UTRA domain CYG41_RS14280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYG41_RS14280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYG41_RS14285 PF08240 Alcohol dehydrogenase GroES-like domain CYG41_RS14285 PF00107 Zinc-binding dehydrogenase CYG41_RS14290 PF03613 PTS system mannose/fructose/sorbose family IID component CYG41_RS14300 PF03610 PTS system fructose IIA component CYG41_RS14300 PF03830 PTS system sorbose subfamily IIB component CYG41_RS14305 PF03610 PTS system fructose IIA component CYG41_RS14305 PF03830 PTS system sorbose subfamily IIB component CYG41_RS14325 PF01116 Fructose-bisphosphate aldolase class-II CYG41_RS14330 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CYG41_RS14330 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CYG41_RS14335 PF03611 PTS system sugar-specific permease component CYG41_RS14350 PF01116 Fructose-bisphosphate aldolase class-II CYG41_RS14355 PF07702 UTRA domain CYG41_RS14355 PF00392 Bacterial regulatory proteins, gntR family CYG41_RS14360 PF00583 Acetyltransferase (GNAT) family CYG41_RS14365 PF00293 NUDIX domain CYG41_RS14375 PF01381 Helix-turn-helix CYG41_RS14390 PF00857 Isochorismatase family CYG41_RS14395 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CYG41_RS14395 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CYG41_RS14395 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CYG41_RS14400 PF03009 Glycerophosphoryl diester phosphodiesterase family CYG41_RS14405 PF01451 Low molecular weight phosphotyrosine protein phosphatase CYG41_RS14410 PF13416 Bacterial extracellular solute-binding protein CYG41_RS14415 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS14420 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS14425 PF17912 MalK OB fold domain CYG41_RS14425 PF00005 ABC transporter CYG41_RS14440 PF00144 Beta-lactamase CYG41_RS14445 PF01380 SIS domain CYG41_RS14450 PF01380 SIS domain CYG41_RS14450 PF01418 Helix-turn-helix domain, rpiR family CYG41_RS14455 PF03830 PTS system sorbose subfamily IIB component CYG41_RS14460 PF03613 PTS system mannose/fructose/sorbose family IID component CYG41_RS14465 PF03609 PTS system sorbose-specific iic component CYG41_RS14480 PF01368 DHH family CYG41_RS14480 PF02272 DHHA1 domain CYG41_RS14485 PF00248 Aldo/keto reductase family CYG41_RS14490 PF13411 MerR HTH family regulatory protein CYG41_RS14500 PF03747 ADP-ribosylglycohydrolase CYG41_RS14505 PF00893 Small Multidrug Resistance protein CYG41_RS14535 PF13350 Tyrosine phosphatase family CYG41_RS14555 PF02590 Predicted SPOUT methyltransferase CYG41_RS14575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CYG41_RS14590 PF00403 Heavy-metal-associated domain CYG41_RS14595 PF00011 Hsp20/alpha crystallin family CYG41_RS14610 PF13180 PDZ domain CYG41_RS14620 PF00753 Metallo-beta-lactamase superfamily CYG41_RS14635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG41_RS14635 PF00989 PAS fold CYG41_RS14635 PF00672 HAMP domain CYG41_RS14635 PF00512 His Kinase A (phospho-acceptor) domain CYG41_RS14640 PF00072 Response regulator receiver domain CYG41_RS14640 PF00486 Transcriptional regulatory protein, C terminal CYG41_RS14645 PF12697 Alpha/beta hydrolase family CYG41_RS14650 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS14655 PF00764 Arginosuccinate synthase CYG41_RS14660 PF14698 Argininosuccinate lyase C-terminal CYG41_RS14660 PF00206 Lyase CYG41_RS14675 PF02378 Phosphotransferase system, EIIC CYG41_RS14680 PF07702 UTRA domain CYG41_RS14680 PF00392 Bacterial regulatory proteins, gntR family CYG41_RS14685 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS14690 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CYG41_RS14720 PF00857 Isochorismatase family CYG41_RS14725 PF07690 Major Facilitator Superfamily CYG41_RS14730 PF07690 Major Facilitator Superfamily CYG41_RS14735 PF00248 Aldo/keto reductase family CYG41_RS14750 PF03613 PTS system mannose/fructose/sorbose family IID component CYG41_RS14755 PF03609 PTS system sorbose-specific iic component CYG41_RS14760 PF03830 PTS system sorbose subfamily IIB component CYG41_RS14760 PF03610 PTS system fructose IIA component CYG41_RS14810 PF08924 Domain of unknown function (DUF1906) CYG41_RS14810 PF01471 Putative peptidoglycan binding domain CYG41_RS14820 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS14825 PF00005 ABC transporter CYG41_RS14875 PF00005 ABC transporter CYG41_RS14880 PF03881 Fructosamine kinase CYG41_RS14885 PF00005 ABC transporter CYG41_RS14890 PF00497 Bacterial extracellular solute-binding proteins, family 3 CYG41_RS14895 PF00528 Binding-protein-dependent transport system inner membrane component CYG41_RS14915 PF07726 ATPase family associated with various cellular activities (AAA) CYG41_RS14915 PF17863 AAA lid domain CYG41_RS14925 PF01841 Transglutaminase-like superfamily CYG41_RS14925 PF11992 Domain of unknown function (DUF3488) CYG41_RS14925 PF13559 Domain of unknown function (DUF4129) CYG41_RS14930 PF13439 Glycosyltransferase Family 4 CYG41_RS14930 PF00534 Glycosyl transferases group 1 CYG41_RS14935 PF01527 Transposase CYG41_RS14940 PF13276 HTH-like domain CYG41_RS14940 PF13333 Integrase core domain CYG41_RS14940 PF00665 Integrase core domain CYG41_RS14945 PF00206 Lyase CYG41_RS14945 PF10415 Fumarase C C-terminus CYG41_RS14975 PF03390 2-hydroxycarboxylate transporter family CYG41_RS14980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CYG41_RS14980 PF00989 PAS fold CYG41_RS14980 PF17203 Single cache domain 3 CYG41_RS14980 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CYG41_RS14985 PF00072 Response regulator receiver domain CYG41_RS15095 PF04860 Phage portal protein CYG41_RS15120 PF04226 Transglycosylase associated protein CYG41_RS15130 PF14572 Phosphoribosyl synthetase-associated domain CYG41_RS15130 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CYG41_RS15140 PF07859 alpha/beta hydrolase fold CYG41_RS15145 PF01232 Mannitol dehydrogenase Rossmann domain CYG41_RS15145 PF08125 Mannitol dehydrogenase C-terminal domain CYG41_RS15150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYG41_RS15155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS15155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CYG41_RS15155 PF00874 PRD domain CYG41_RS15155 PF05043 Mga helix-turn-helix domain CYG41_RS15155 PF08279 HTH domain CYG41_RS15160 PF02378 Phosphotransferase system, EIIC CYG41_RS15160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CYG41_RS15165 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CYG41_RS15195 PF12704 MacB-like periplasmic core domain CYG41_RS15195 PF00005 ABC transporter CYG41_RS15195 PF02687 FtsX-like permease family CYG41_RS15200 PF00005 ABC transporter CYG41_RS15200 PF02687 FtsX-like permease family CYG41_RS15200 PF12704 MacB-like periplasmic core domain CYG41_RS15215 PF00155 Aminotransferase class I and II CYG41_RS15220 PF00795 Carbon-nitrogen hydrolase CYG41_RS15225 PF03180 NLPA lipoprotein CYG41_RS15240 PF00465 Iron-containing alcohol dehydrogenase CYG41_RS15255 PF07687 Peptidase dimerisation domain CYG41_RS15255 PF01546 Peptidase family M20/M25/M40 CYG41_RS15280 PF00005 ABC transporter CYG41_RS15280 PF00664 ABC transporter transmembrane region CYG41_RS15285 PF01134 Glucose inhibited division protein A CYG41_RS15285 PF13932 GidA associated domain CYG41_RS15290 PF01926 50S ribosome-binding GTPase CYG41_RS15290 PF10396 GTP-binding protein TrmE N-terminus CYG41_RS15290 PF12631 MnmE helical domain CYG41_RS15305 PF02096 60Kd inner membrane protein CYG41_RS15310 PF00825 Ribonuclease P CYG41_RS15315 PF00468 Ribosomal protein L34