locus-tag class description LLCC_RS00010 PF01807 CHC2 zinc finger LLCC_RS00010 PF10410 DnaB-helicase binding domain of primase LLCC_RS00010 PF08275 DNA primase catalytic core, N-terminal domain LLCC_RS00105 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LLCC_RS00105 PF05698 Bacterial trigger factor protein (TF) C-terminus LLCC_RS00105 PF05697 Bacterial trigger factor protein (TF) LLCC_RS00115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LLCC_RS00120 PF00459 Inositol monophosphatase family LLCC_RS00125 PF05256 Uncharacterised protein family (UPF0223) LLCC_RS00130 PF03960 ArsC family LLCC_RS00135 PF06908 YspA SLOG family LLCC_RS00140 PF03838 Recombination protein U LLCC_RS00145 PF00912 Transglycosylase LLCC_RS00145 PF00905 Penicillin binding protein transpeptidase domain LLCC_RS00150 PF00753 Metallo-beta-lactamase superfamily LLCC_RS00155 PF01476 LysM domain LLCC_RS00155 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LLCC_RS00160 PF00291 Pyridoxal-phosphate dependent enzyme LLCC_RS00170 PF00877 NlpC/P60 family LLCC_RS00175 PF00266 Aminotransferase class-V LLCC_RS00205 PF12833 Helix-turn-helix domain LLCC_RS00205 PF02805 Metal binding domain of Ada LLCC_RS00210 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LLCC_RS00210 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LLCC_RS00220 PF00216 Bacterial DNA-binding protein LLCC_RS00230 PF00933 Glycosyl hydrolase family 3 N terminal domain LLCC_RS00235 PF13472 GDSL-like Lipase/Acylhydrolase family LLCC_RS00240 PF02645 Uncharacterised protein, DegV family COG1307 LLCC_RS00245 PF03006 Haemolysin-III related LLCC_RS00250 PF07733 Bacterial DNA polymerase III alpha NTPase domain LLCC_RS00250 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LLCC_RS00250 PF14579 Helix-hairpin-helix motif LLCC_RS00250 PF02811 PHP domain LLCC_RS00250 PF01336 OB-fold nucleic acid binding domain LLCC_RS00265 PF01712 Deoxynucleoside kinase LLCC_RS00290 PF00056 lactate/malate dehydrogenase, NAD binding domain LLCC_RS00290 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LLCC_RS00360 PF00117 Glutamine amidotransferase class-I LLCC_RS00360 PF06418 CTP synthase N-terminus LLCC_RS00365 PF00266 Aminotransferase class-V LLCC_RS00370 PF04260 Protein of unknown function (DUF436) LLCC_RS00375 PF07155 ECF-type riboflavin transporter, S component LLCC_RS00380 PF08543 Phosphomethylpyrimidine kinase LLCC_RS00385 PF01416 tRNA pseudouridine synthase LLCC_RS00395 PF03816 Cell envelope-related transcriptional attenuator domain LLCC_RS00405 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LLCC_RS00420 PF13419 Haloacid dehalogenase-like hydrolase LLCC_RS00425 PF03633 Glycosyl hydrolase family 65, C-terminal domain LLCC_RS00425 PF03636 Glycosyl hydrolase family 65, N-terminal domain LLCC_RS00425 PF03632 Glycosyl hydrolase family 65 central catalytic domain LLCC_RS00430 PF00367 phosphotransferase system, EIIB LLCC_RS00430 PF02378 Phosphotransferase system, EIIC LLCC_RS00435 PF02378 Phosphotransferase system, EIIC LLCC_RS00435 PF00367 phosphotransferase system, EIIB LLCC_RS00435 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LLCC_RS00440 PF00392 Bacterial regulatory proteins, gntR family LLCC_RS00440 PF07702 UTRA domain LLCC_RS00445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LLCC_RS00445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LLCC_RS00445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LLCC_RS00445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LLCC_RS00455 PF02457 DisA bacterial checkpoint controller nucleotide-binding LLCC_RS00465 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LLCC_RS00465 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LLCC_RS00465 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LLCC_RS00465 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LLCC_RS00465 PF10371 Domain of unknown function LLCC_RS00470 PF03459 TOBE domain LLCC_RS00470 PF17912 MalK OB fold domain LLCC_RS00470 PF00005 ABC transporter LLCC_RS00475 PF00781 Diacylglycerol kinase catalytic domain LLCC_RS00480 PF03120 NAD-dependent DNA ligase OB-fold domain LLCC_RS00480 PF01653 NAD-dependent DNA ligase adenylation domain LLCC_RS00480 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LLCC_RS00480 PF12826 Helix-hairpin-helix motif LLCC_RS00480 PF00533 BRCA1 C Terminus (BRCT) domain LLCC_RS00495 PF00232 Glycosyl hydrolase family 1 LLCC_RS00500 PF02378 Phosphotransferase system, EIIC LLCC_RS00505 PF01380 SIS domain LLCC_RS00505 PF00571 CBS domain LLCC_RS00510 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LLCC_RS00515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LLCC_RS00520 PF01380 SIS domain LLCC_RS00520 PF01418 Helix-turn-helix domain, rpiR family LLCC_RS00530 PF00271 Helicase conserved C-terminal domain LLCC_RS00530 PF00270 DEAD/DEAH box helicase LLCC_RS00540 PF02525 Flavodoxin-like fold LLCC_RS00550 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LLCC_RS00550 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LLCC_RS00555 PF01070 FMN-dependent dehydrogenase LLCC_RS00570 PF08544 GHMP kinases C terminal LLCC_RS00570 PF00288 GHMP kinases N terminal domain LLCC_RS00570 PF10509 Galactokinase galactose-binding signature LLCC_RS00575 PF01047 MarR family LLCC_RS00580 PF13732 Domain of unknown function (DUF4162) LLCC_RS00580 PF00005 ABC transporter LLCC_RS00585 PF01061 ABC-2 type transporter LLCC_RS00595 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LLCC_RS00600 PF06156 Initiation control protein YabA LLCC_RS00605 PF04468 PSP1 C-terminal conserved region LLCC_RS00610 PF09115 DNA polymerase III, delta subunit, C terminal LLCC_RS00615 PF02223 Thymidylate kinase LLCC_RS00620 PF00486 Transcriptional regulatory protein, C terminal LLCC_RS00620 PF00072 Response regulator receiver domain LLCC_RS00625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLCC_RS00625 PF00672 HAMP domain LLCC_RS00625 PF00512 His Kinase A (phospho-acceptor) domain LLCC_RS00625 PF13426 PAS domain LLCC_RS00630 PF00753 Metallo-beta-lactamase superfamily LLCC_RS00635 PF00118 TCP-1/cpn60 chaperonin family LLCC_RS00640 PF00166 Chaperonin 10 Kd subunit LLCC_RS00645 PF00436 Single-strand binding protein family LLCC_RS00650 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLCC_RS00650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LLCC_RS00655 PF14794 Domain of unknown function (DUF4479) LLCC_RS00655 PF01588 Putative tRNA binding domain LLCC_RS00660 PF00085 Thioredoxin LLCC_RS00670 PF05343 M42 glutamyl aminopeptidase LLCC_RS00675 PF00912 Transglycosylase LLCC_RS00675 PF00905 Penicillin binding protein transpeptidase domain LLCC_RS00680 PF00579 tRNA synthetases class I (W and Y) LLCC_RS00680 PF01479 S4 domain LLCC_RS00690 PF00999 Sodium/hydrogen exchanger family LLCC_RS00695 PF02566 OsmC-like protein LLCC_RS00710 PF02926 THUMP domain LLCC_RS00710 PF02568 Thiamine biosynthesis protein (ThiI) LLCC_RS00725 PF03466 LysR substrate binding domain LLCC_RS00725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLCC_RS00730 PF00056 lactate/malate dehydrogenase, NAD binding domain LLCC_RS00730 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LLCC_RS00735 PF03601 Conserved hypothetical protein 698 LLCC_RS00745 PF00152 tRNA synthetases class II (D, K and N) LLCC_RS00745 PF01336 OB-fold nucleic acid binding domain LLCC_RS00760 PF02424 ApbE family LLCC_RS00765 PF03358 NADPH-dependent FMN reductase LLCC_RS00765 PF00890 FAD binding domain LLCC_RS00765 PF04205 FMN-binding domain LLCC_RS00770 PF00324 Amino acid permease LLCC_RS00775 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LLCC_RS00780 PF00849 RNA pseudouridylate synthase LLCC_RS00785 PF01513 ATP-NAD kinase LLCC_RS00790 PF04607 Region found in RelA / SpoT proteins LLCC_RS00810 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) LLCC_RS00820 PF00324 Amino acid permease LLCC_RS00825 PF00324 Amino acid permease LLCC_RS00830 PF00154 recA bacterial DNA recombination protein LLCC_RS00835 PF06827 Zinc finger found in FPG and IleRS LLCC_RS00835 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LLCC_RS00835 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LLCC_RS00840 PF13537 Glutamine amidotransferase domain LLCC_RS00840 PF00733 Asparagine synthase LLCC_RS00845 PF07650 KH domain LLCC_RS00845 PF01926 50S ribosome-binding GTPase LLCC_RS00850 PF00271 Helicase conserved C-terminal domain LLCC_RS00850 PF00270 DEAD/DEAH box helicase LLCC_RS00855 PF03144 Elongation factor Tu domain 2 LLCC_RS00855 PF16658 Class II release factor RF3, C-terminal domain LLCC_RS00855 PF00009 Elongation factor Tu GTP binding domain LLCC_RS00860 PF00005 ABC transporter LLCC_RS00860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LLCC_RS00865 PF00005 ABC transporter LLCC_RS00865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LLCC_RS00870 PF12911 N-terminal TM domain of oligopeptide transport permease C LLCC_RS00870 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS00875 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS00890 PF08245 Mur ligase middle domain LLCC_RS00890 PF02875 Mur ligase family, glutamate ligase domain LLCC_RS00890 PF01225 Mur ligase family, catalytic domain LLCC_RS00895 PF07478 D-ala D-ala ligase C-terminus LLCC_RS00895 PF01820 D-ala D-ala ligase N-terminus LLCC_RS00900 PF13662 Toprim domain LLCC_RS00900 PF02132 RecR protein LLCC_RS00905 PF03717 Penicillin-binding Protein dimerisation domain LLCC_RS00905 PF00905 Penicillin binding protein transpeptidase domain LLCC_RS00910 PF13192 Thioredoxin domain LLCC_RS00910 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLCC_RS00915 PF00578 AhpC/TSA family LLCC_RS00920 PF00300 Histidine phosphatase superfamily (branch 1) LLCC_RS00925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LLCC_RS00930 PF01638 HxlR-like helix-turn-helix LLCC_RS00935 PF00248 Aldo/keto reductase family LLCC_RS00940 PF07690 Major Facilitator Superfamily LLCC_RS00950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLCC_RS00950 PF03466 LysR substrate binding domain LLCC_RS00955 PF01497 Periplasmic binding protein LLCC_RS00960 PF01032 FecCD transport family LLCC_RS00965 PF01032 FecCD transport family LLCC_RS00970 PF00005 ABC transporter LLCC_RS00990 PF07155 ECF-type riboflavin transporter, S component LLCC_RS00995 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS01000 PF00005 ABC transporter LLCC_RS01000 PF09383 NIL domain LLCC_RS01005 PF03180 NLPA lipoprotein LLCC_RS01015 PF03180 NLPA lipoprotein LLCC_RS01020 PF03180 NLPA lipoprotein LLCC_RS01025 PF03180 NLPA lipoprotein LLCC_RS01030 PF09515 Thiamine transporter protein (Thia_YuaJ) LLCC_RS01035 PF04073 Aminoacyl-tRNA editing domain LLCC_RS01040 PF02632 BioY family LLCC_RS01065 PF02229 Transcriptional Coactivator p15 (PC4) LLCC_RS01070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LLCC_RS01075 PF00664 ABC transporter transmembrane region LLCC_RS01075 PF00005 ABC transporter LLCC_RS01080 PF00005 ABC transporter LLCC_RS01080 PF00664 ABC transporter transmembrane region LLCC_RS01085 PF03551 Transcriptional regulator PadR-like family LLCC_RS01090 PF01545 Cation efflux family LLCC_RS01090 PF16916 Dimerisation domain of Zinc Transporter LLCC_RS01095 PF01047 MarR family LLCC_RS01100 PF07690 Major Facilitator Superfamily LLCC_RS01105 PF11838 ERAP1-like C-terminal domain LLCC_RS01105 PF01433 Peptidase family M1 domain LLCC_RS01110 PF08534 Redoxin LLCC_RS01115 PF02872 5'-nucleotidase, C-terminal domain LLCC_RS01115 PF00149 Calcineurin-like phosphoesterase LLCC_RS01120 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS01130 PF00005 ABC transporter LLCC_RS01140 PF01719 Plasmid replication protein LLCC_RS01185 PF00814 Glycoprotease family LLCC_RS01190 PF00583 Acetyltransferase (GNAT) family LLCC_RS01195 PF00583 Acetyltransferase (GNAT) family LLCC_RS01205 PF07288 Protein of unknown function (DUF1447) LLCC_RS01210 PF00753 Metallo-beta-lactamase superfamily LLCC_RS01210 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LLCC_RS01210 PF17770 Ribonuclease J C-terminal domain LLCC_RS01225 PF00962 Adenosine/AMP deaminase LLCC_RS01230 PF10263 SprT-like family LLCC_RS01230 PF17283 SprT-like zinc ribbon domain LLCC_RS01235 PF16921 Tex protein YqgF-like domain LLCC_RS01235 PF09371 Tex-like protein N-terminal domain LLCC_RS01235 PF00575 S1 RNA binding domain LLCC_RS01235 PF17674 HHH domain LLCC_RS01240 PF01479 S4 domain LLCC_RS01240 PF00163 Ribosomal protein S4/S9 N-terminal domain LLCC_RS01260 PF01522 Polysaccharide deacetylase LLCC_RS01260 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain LLCC_RS01265 PF07687 Peptidase dimerisation domain LLCC_RS01265 PF01546 Peptidase family M20/M25/M40 LLCC_RS01270 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal LLCC_RS01270 PF00132 Bacterial transferase hexapeptide (six repeats) LLCC_RS01270 PF14602 Hexapeptide repeat of succinyl-transferase LLCC_RS01285 PF02361 Cobalt transport protein LLCC_RS01290 PF00005 ABC transporter LLCC_RS01295 PF00005 ABC transporter LLCC_RS01310 PF00113 Enolase, C-terminal TIM barrel domain LLCC_RS01310 PF03952 Enolase, N-terminal domain LLCC_RS01330 PF03477 ATP cone domain LLCC_RS01330 PF13597 Anaerobic ribonucleoside-triphosphate reductase LLCC_RS01335 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LLCC_RS01335 PF01476 LysM domain LLCC_RS01350 PF00857 Isochorismatase family LLCC_RS01360 PF13936 Helix-turn-helix domain LLCC_RS01370 PF02664 S-Ribosylhomocysteinase (LuxS) LLCC_RS01375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LLCC_RS01375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LLCC_RS01390 PF00664 ABC transporter transmembrane region LLCC_RS01390 PF00005 ABC transporter LLCC_RS01395 PF07166 Protein of unknown function (DUF1398) LLCC_RS01400 PF01256 Carbohydrate kinase LLCC_RS01420 PF17785 PUA-like domain LLCC_RS01420 PF10672 S-adenosylmethionine-dependent methyltransferase LLCC_RS01435 PF03577 Peptidase family C69 LLCC_RS01440 PF00230 Major intrinsic protein LLCC_RS01445 PF03610 PTS system fructose IIA component LLCC_RS01450 PF02734 DAK2 domain LLCC_RS01455 PF02733 Dak1 domain LLCC_RS01460 PF14278 Transcriptional regulator C-terminal region LLCC_RS01460 PF00440 Bacterial regulatory proteins, tetR family LLCC_RS01465 PF02733 Dak1 domain LLCC_RS01475 PF00162 Phosphoglycerate kinase LLCC_RS01485 PF01165 Ribosomal protein S21 LLCC_RS01490 PF13411 MerR HTH family regulatory protein LLCC_RS01495 PF07690 Major Facilitator Superfamily LLCC_RS01500 PF17754 MftR C-terminal domain LLCC_RS01500 PF00440 Bacterial regulatory proteins, tetR family LLCC_RS01520 PF03167 Uracil DNA glycosylase superfamily LLCC_RS01530 PF01709 Transcriptional regulator LLCC_RS01535 PF05636 HIGH Nucleotidyl Transferase LLCC_RS01540 PF13649 Methyltransferase domain LLCC_RS01555 PF01966 HD domain LLCC_RS01560 PF01467 Cytidylyltransferase-like LLCC_RS01565 PF01985 CRS1 / YhbY (CRM) domain LLCC_RS01575 PF16360 GTP-binding GTPase Middle Region LLCC_RS01575 PF13167 GTP-binding GTPase N-terminal LLCC_RS01575 PF01926 50S ribosome-binding GTPase LLCC_RS01580 PF13344 Haloacid dehalogenase-like hydrolase LLCC_RS01580 PF00293 NUDIX domain LLCC_RS01585 PF01926 50S ribosome-binding GTPase LLCC_RS01590 PF00478 IMP dehydrogenase / GMP reductase domain LLCC_RS01590 PF00571 CBS domain LLCC_RS01620 PF03275 UDP-galactopyranose mutase LLCC_RS01630 PF17103 Stealth protein CR4, conserved region 4 LLCC_RS01630 PF17101 Stealth protein CR1, conserved region 1 LLCC_RS01630 PF11380 Stealth protein CR2, conserved region 2 LLCC_RS01635 PF00534 Glycosyl transferases group 1 LLCC_RS01635 PF13439 Glycosyltransferase Family 4 LLCC_RS01640 PF00535 Glycosyl transferase family 2 LLCC_RS01670 PF00535 Glycosyl transferase family 2 LLCC_RS01670 PF01501 Glycosyl transferase family 8 LLCC_RS01680 PF00005 ABC transporter LLCC_RS01690 PF00535 Glycosyl transferase family 2 LLCC_RS01700 PF04321 RmlD substrate binding domain LLCC_RS01705 PF16363 GDP-mannose 4,6 dehydratase LLCC_RS01715 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LLCC_RS01725 PF00483 Nucleotidyl transferase LLCC_RS01735 PF00830 Ribosomal L28 family LLCC_RS01740 PF03780 Asp23 family, cell envelope-related function LLCC_RS01745 PF13684 Dihydroxyacetone kinase family LLCC_RS01745 PF02734 DAK2 domain LLCC_RS01750 PF01641 SelR domain LLCC_RS01760 PF07664 Ferrous iron transport protein B C terminus LLCC_RS01760 PF17910 FeoB cytosolic helical domain LLCC_RS01760 PF02421 Ferrous iron transport protein B LLCC_RS01760 PF07670 Nucleoside recognition LLCC_RS01775 PF13936 Helix-turn-helix domain LLCC_RS01780 PF00348 Polyprenyl synthetase LLCC_RS01785 PF00881 Nitroreductase family LLCC_RS01790 PF04055 Radical SAM superfamily LLCC_RS01795 PF06265 Protein of unknown function (DUF1027) LLCC_RS01800 PF02872 5'-nucleotidase, C-terminal domain LLCC_RS01805 PF00692 dUTPase LLCC_RS01810 PF00232 Glycosyl hydrolase family 1 LLCC_RS01825 PF02378 Phosphotransferase system, EIIC LLCC_RS01830 PF00872 Transposase, Mutator family LLCC_RS01845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LLCC_RS01860 PF01812 5-formyltetrahydrofolate cyclo-ligase family LLCC_RS01865 PF00313 'Cold-shock' DNA-binding domain LLCC_RS01875 PF01425 Amidase LLCC_RS01880 PF02934 GatB/GatE catalytic domain LLCC_RS01880 PF02637 GatB domain LLCC_RS01885 PF01425 Amidase LLCC_RS01890 PF02686 Glu-tRNAGln amidotransferase C subunit LLCC_RS01895 PF08222 CodY helix-turn-helix domain LLCC_RS01895 PF06018 CodY GAF-like domain LLCC_RS01900 PF00155 Aminotransferase class I and II LLCC_RS01925 PF13380 CoA binding domain LLCC_RS01930 PF07690 Major Facilitator Superfamily LLCC_RS01940 PF01702 Queuine tRNA-ribosyltransferase LLCC_RS01980 PF00440 Bacterial regulatory proteins, tetR family LLCC_RS01980 PF18665 Tetracyclin repressor-like, C-terminal domain LLCC_RS01990 PF13936 Helix-turn-helix domain LLCC_RS02000 PF02806 Alpha amylase, C-terminal all-beta domain LLCC_RS02000 PF00128 Alpha amylase, catalytic domain LLCC_RS02000 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LLCC_RS02005 PF00440 Bacterial regulatory proteins, tetR family LLCC_RS02010 PF00106 short chain dehydrogenase LLCC_RS02020 PF00106 short chain dehydrogenase LLCC_RS02030 PF06949 Protein of unknown function (DUF1292) LLCC_RS02035 PF03652 Holliday junction resolvase LLCC_RS02040 PF06135 IreB regulatory phosphoprotein LLCC_RS02045 PF02517 CPBP intramembrane metalloprotease LLCC_RS02060 PF00248 Aldo/keto reductase family LLCC_RS02065 PF00468 Ribosomal protein L34 LLCC_RS02070 PF14804 Jag N-terminus LLCC_RS02070 PF01424 R3H domain LLCC_RS02075 PF02096 60Kd inner membrane protein LLCC_RS02080 PF00825 Ribonuclease P LLCC_RS02090 PF07690 Major Facilitator Superfamily LLCC_RS02095 PF00206 Lyase LLCC_RS02095 PF14698 Argininosuccinate lyase C-terminal LLCC_RS02100 PF00764 Arginosuccinate synthase LLCC_RS02125 PF07690 Major Facilitator Superfamily LLCC_RS02130 PF00893 Small Multidrug Resistance protein LLCC_RS02160 PF02575 YbaB/EbfC DNA-binding family LLCC_RS02170 PF05524 PEP-utilising enzyme, N-terminal LLCC_RS02170 PF00391 PEP-utilising enzyme, mobile domain LLCC_RS02170 PF02896 PEP-utilising enzyme, TIM barrel domain LLCC_RS02175 PF00381 PTS HPr component phosphorylation site LLCC_RS02180 PF00793 DAHP synthetase I family LLCC_RS02185 PF07516 SecA Wing and Scaffold domain LLCC_RS02185 PF01043 SecA preprotein cross-linking domain LLCC_RS02185 PF07517 SecA DEAD-like domain LLCC_RS02185 PF02810 SEC-C motif LLCC_RS02190 PF02525 Flavodoxin-like fold LLCC_RS02200 PF01553 Acyltransferase LLCC_RS02205 PF13520 Amino acid permease LLCC_RS02210 PF13419 Haloacid dehalogenase-like hydrolase LLCC_RS02220 PF02580 D-Tyr-tRNA(Tyr) deacylase LLCC_RS02230 PF04607 Region found in RelA / SpoT proteins LLCC_RS02230 PF13291 ACT domain LLCC_RS02230 PF02824 TGS domain LLCC_RS02235 PF01522 Polysaccharide deacetylase LLCC_RS02240 PF04452 RNA methyltransferase LLCC_RS02265 PF00005 ABC transporter LLCC_RS02265 PF12848 ABC transporter LLCC_RS02275 PF13302 Acetyltransferase (GNAT) domain LLCC_RS02280 PF12002 MgsA AAA+ ATPase C terminal LLCC_RS02280 PF05496 Holliday junction DNA helicase RuvB P-loop domain LLCC_RS02280 PF16193 AAA C-terminal domain LLCC_RS02285 PF17762 HTH domain found in ParB protein LLCC_RS02285 PF02195 ParB-like nuclease domain LLCC_RS02295 PF00403 Heavy-metal-associated domain LLCC_RS02300 PF01783 Ribosomal L32p protein family LLCC_RS02305 PF00471 Ribosomal protein L33 LLCC_RS02310 PF01613 Flavin reductase like domain LLCC_RS02315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LLCC_RS02320 PF01738 Dienelactone hydrolase family LLCC_RS02330 PF00582 Universal stress protein family LLCC_RS02340 PF00106 short chain dehydrogenase LLCC_RS02345 PF01053 Cys/Met metabolism PLP-dependent enzyme LLCC_RS02360 PF00440 Bacterial regulatory proteins, tetR family LLCC_RS02365 PF00106 short chain dehydrogenase LLCC_RS02385 PF00005 ABC transporter LLCC_RS02385 PF12848 ABC transporter LLCC_RS02390 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LLCC_RS02395 PF02504 Fatty acid synthesis protein LLCC_RS02400 PF13520 Amino acid permease LLCC_RS02405 PF02566 OsmC-like protein LLCC_RS02410 PF00579 tRNA synthetases class I (W and Y) LLCC_RS02430 PF03009 Glycerophosphoryl diester phosphodiesterase family LLCC_RS02435 PF03099 Biotin/lipoate A/B protein ligase family LLCC_RS02435 PF10437 Bacterial lipoate protein ligase C-terminus LLCC_RS02440 PF00676 Dehydrogenase E1 component LLCC_RS02445 PF02780 Transketolase, C-terminal domain LLCC_RS02445 PF02779 Transketolase, pyrimidine binding domain LLCC_RS02450 PF00364 Biotin-requiring enzyme LLCC_RS02450 PF02817 e3 binding domain LLCC_RS02450 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LLCC_RS02455 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLCC_RS02455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LLCC_RS02460 PF02565 Recombination protein O C terminal LLCC_RS02460 PF11967 Recombination protein O N terminal LLCC_RS02465 PF00155 Aminotransferase class I and II LLCC_RS02475 PF00583 Acetyltransferase (GNAT) family LLCC_RS02480 PF00916 Sulfate permease family LLCC_RS02480 PF01740 STAS domain LLCC_RS02490 PF13673 Acetyltransferase (GNAT) domain LLCC_RS02530 PF01232 Mannitol dehydrogenase Rossmann domain LLCC_RS02530 PF08125 Mannitol dehydrogenase C-terminal domain LLCC_RS02535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LLCC_RS02545 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LLCC_RS02545 PF02378 Phosphotransferase system, EIIC LLCC_RS02590 PF00004 ATPase family associated with various cellular activities (AAA) LLCC_RS02590 PF17862 AAA+ lid domain LLCC_RS02590 PF06480 FtsH Extracellular LLCC_RS02590 PF01434 Peptidase family M41 LLCC_RS02595 PF00156 Phosphoribosyl transferase domain LLCC_RS02600 PF01171 PP-loop family LLCC_RS02600 PF11734 TilS substrate C-terminal domain LLCC_RS02620 PF01479 S4 domain LLCC_RS02625 PF02559 CarD-like/TRCF domain LLCC_RS02625 PF03461 TRCF domain LLCC_RS02625 PF00270 DEAD/DEAH box helicase LLCC_RS02625 PF17757 UvrB interaction domain LLCC_RS02625 PF00271 Helicase conserved C-terminal domain LLCC_RS02635 PF01381 Helix-turn-helix LLCC_RS02640 PF01926 50S ribosome-binding GTPase LLCC_RS02640 PF06071 Protein of unknown function (DUF933) LLCC_RS02645 PF01381 Helix-turn-helix LLCC_RS02655 PF00580 UvrD/REP helicase N-terminal domain LLCC_RS02655 PF13361 UvrD-like helicase C-terminal domain LLCC_RS02660 PF12705 PD-(D/E)XK nuclease superfamily LLCC_RS02665 PF00712 DNA polymerase III beta subunit, N-terminal domain LLCC_RS02665 PF02767 DNA polymerase III beta subunit, central domain LLCC_RS02665 PF02768 DNA polymerase III beta subunit, C-terminal domain LLCC_RS02670 PF00308 Bacterial dnaA protein LLCC_RS02670 PF08299 Bacterial dnaA protein helix-turn-helix LLCC_RS02705 PF04055 Radical SAM superfamily LLCC_RS02705 PF16199 Radical_SAM C-terminal domain LLCC_RS02710 PF06962 Putative rRNA methylase LLCC_RS02715 PF06800 Sugar transport protein LLCC_RS02720 PF00768 D-alanyl-D-alanine carboxypeptidase LLCC_RS02720 PF07943 Penicillin-binding protein 5, C-terminal domain LLCC_RS02735 PF00164 Ribosomal protein S12/S23 LLCC_RS02740 PF00177 Ribosomal protein S7p/S5e LLCC_RS02745 PF00009 Elongation factor Tu GTP binding domain LLCC_RS02745 PF00679 Elongation factor G C-terminus LLCC_RS02745 PF03764 Elongation factor G, domain IV LLCC_RS02745 PF03144 Elongation factor Tu domain 2 LLCC_RS02745 PF14492 Elongation Factor G, domain II LLCC_RS02770 PF09182 Bacterial purine repressor, N-terminal LLCC_RS02770 PF00156 Phosphoribosyl transferase domain LLCC_RS02775 PF10502 Signal peptidase, peptidase S26 LLCC_RS02780 PF11858 Domain of unknown function (DUF3378) LLCC_RS02780 PF01351 Ribonuclease HII LLCC_RS02785 PF00005 ABC transporter LLCC_RS02795 PF00572 Ribosomal protein L13 LLCC_RS02800 PF00380 Ribosomal protein S9/S16 LLCC_RS02860 PF02517 CPBP intramembrane metalloprotease LLCC_RS02880 PF00690 Cation transporter/ATPase, N-terminus LLCC_RS02880 PF00689 Cation transporting ATPase, C-terminus LLCC_RS02885 PF08279 HTH domain LLCC_RS02885 PF04394 Protein of unknown function, DUF536 LLCC_RS02890 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LLCC_RS02890 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LLCC_RS02895 PF08274 PhnA Zinc-Ribbon LLCC_RS02895 PF03831 PhnA domain LLCC_RS02900 PF17191 RecG wedge domain LLCC_RS02900 PF00271 Helicase conserved C-terminal domain LLCC_RS02900 PF00270 DEAD/DEAH box helicase LLCC_RS02925 PF12631 MnmE helical domain LLCC_RS02925 PF10396 GTP-binding protein TrmE N-terminus LLCC_RS02925 PF01926 50S ribosome-binding GTPase LLCC_RS02935 PF01479 S4 domain LLCC_RS02935 PF00849 RNA pseudouridylate synthase LLCC_RS02940 PF00440 Bacterial regulatory proteins, tetR family LLCC_RS02945 PF01869 BadF/BadG/BcrA/BcrD ATPase family LLCC_RS02955 PF00582 Universal stress protein family LLCC_RS02960 PF07690 Major Facilitator Superfamily LLCC_RS02965 PF13545 Crp-like helix-turn-helix domain LLCC_RS02970 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LLCC_RS02975 PF00293 NUDIX domain LLCC_RS02980 PF04085 rod shape-determining protein MreC LLCC_RS02990 PF05257 CHAP domain LLCC_RS02995 PF13537 Glutamine amidotransferase domain LLCC_RS02995 PF00733 Asparagine synthase LLCC_RS03005 PF01177 Asp/Glu/Hydantoin racemase LLCC_RS03015 PF00684 DnaJ central domain LLCC_RS03015 PF00226 DnaJ domain LLCC_RS03015 PF01556 DnaJ C terminal domain LLCC_RS03025 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LLCC_RS03025 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LLCC_RS03035 PF01925 Sulfite exporter TauE/SafE LLCC_RS03065 PF05192 MutS domain III LLCC_RS03065 PF05188 MutS domain II LLCC_RS03065 PF01624 MutS domain I LLCC_RS03065 PF00488 MutS domain V LLCC_RS03065 PF05190 MutS family domain IV LLCC_RS03075 PF08676 MutL C terminal dimerisation domain LLCC_RS03075 PF01119 DNA mismatch repair protein, C-terminal domain LLCC_RS03080 PF01330 RuvA N terminal domain LLCC_RS03080 PF07499 RuvA, C-terminal domain LLCC_RS03085 PF17864 RuvB AAA lid domain LLCC_RS03085 PF05496 Holliday junction DNA helicase RuvB P-loop domain LLCC_RS03085 PF05491 RuvB C-terminal winged helix domain LLCC_RS03090 PF01451 Low molecular weight phosphotyrosine protein phosphatase LLCC_RS03095 PF13411 MerR HTH family regulatory protein LLCC_RS03100 PF00120 Glutamine synthetase, catalytic domain LLCC_RS03100 PF03951 Glutamine synthetase, beta-Grasp domain LLCC_RS03125 PF10668 Phage terminase small subunit LLCC_RS03125 PF03592 Terminase small subunit LLCC_RS03210 PF14659 Phage integrase, N-terminal SAM-like domain LLCC_RS03210 PF00589 Phage integrase family LLCC_RS03220 PF00793 DAHP synthetase I family LLCC_RS03220 PF01817 Chorismate mutase type II LLCC_RS03225 PF13185 GAF domain LLCC_RS03235 PF12169 DNA polymerase III subunits gamma and tau domain III LLCC_RS03240 PF00324 Amino acid permease LLCC_RS03245 PF02673 Bacitracin resistance protein BacA LLCC_RS03250 PF01250 Ribosomal protein S6 LLCC_RS03255 PF00436 Single-strand binding protein family LLCC_RS03260 PF01084 Ribosomal protein S18 LLCC_RS03265 PF00149 Calcineurin-like phosphoesterase LLCC_RS03265 PF10518 TAT (twin-arginine translocation) pathway signal sequence LLCC_RS03275 PF01418 Helix-turn-helix domain, rpiR family LLCC_RS03275 PF01380 SIS domain LLCC_RS03280 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LLCC_RS03280 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LLCC_RS03285 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LLCC_RS03285 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LLCC_RS03315 PF02631 RecX family LLCC_RS03330 PF01938 TRAM domain LLCC_RS03330 PF05958 tRNA (Uracil-5-)-methyltransferase LLCC_RS03365 PF08264 Anticodon-binding domain of tRNA LLCC_RS03365 PF10458 Valyl tRNA synthetase tRNA binding arm LLCC_RS03365 PF00133 tRNA synthetases class I (I, L, M and V) LLCC_RS03375 PF01638 HxlR-like helix-turn-helix LLCC_RS03380 PF13936 Helix-turn-helix domain LLCC_RS03385 PF05368 NmrA-like family LLCC_RS03405 PF00342 Phosphoglucose isomerase LLCC_RS03425 PF07690 Major Facilitator Superfamily LLCC_RS03435 PF01467 Cytidylyltransferase-like LLCC_RS03440 PF13180 PDZ domain LLCC_RS03440 PF05362 Lon protease (S16) C-terminal proteolytic domain LLCC_RS03465 PF00171 Aldehyde dehydrogenase family LLCC_RS03465 PF00465 Iron-containing alcohol dehydrogenase LLCC_RS03470 PF10282 Lactonase, 7-bladed beta-propeller LLCC_RS03475 PF00318 Ribosomal protein S2 LLCC_RS03480 PF00889 Elongation factor TS LLCC_RS03485 PF06160 Septation ring formation regulator, EzrA LLCC_RS03530 PF00476 DNA polymerase family A LLCC_RS03530 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LLCC_RS03530 PF01367 5'-3' exonuclease, C-terminal SAM fold LLCC_RS03535 PF05175 Methyltransferase small domain LLCC_RS03550 PF13439 Glycosyltransferase Family 4 LLCC_RS03550 PF00534 Glycosyl transferases group 1 LLCC_RS03555 PF13439 Glycosyltransferase Family 4 LLCC_RS03555 PF00534 Glycosyl transferases group 1 LLCC_RS03560 PF13180 PDZ domain LLCC_RS03565 PF02590 Predicted SPOUT methyltransferase LLCC_RS03575 PF02699 Preprotein translocase subunit LLCC_RS03580 PF01255 Putative undecaprenyl diphosphate synthase LLCC_RS03590 PF02163 Peptidase family M50 LLCC_RS03590 PF17820 PDZ domain LLCC_RS03595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LLCC_RS03595 PF03129 Anticodon binding domain LLCC_RS03595 PF04073 Aminoacyl-tRNA editing domain LLCC_RS03600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LLCC_RS03600 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLCC_RS03610 PF02811 PHP domain LLCC_RS03610 PF00929 Exonuclease LLCC_RS03610 PF14480 DNA polymerase III polC-type N-terminus I LLCC_RS03610 PF11490 DNA polymerase III polC-type N-terminus II LLCC_RS03610 PF07733 Bacterial DNA polymerase III alpha NTPase domain LLCC_RS03610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LLCC_RS03610 PF14579 Helix-hairpin-helix motif LLCC_RS03620 PF00482 Type II secretion system (T2SS), protein F LLCC_RS03625 PF07963 Prokaryotic N-terminal methylation motif LLCC_RS03650 PF01047 MarR family LLCC_RS03655 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment LLCC_RS03655 PF01297 Zinc-uptake complex component A periplasmic LLCC_RS03660 PF00005 ABC transporter LLCC_RS03665 PF00950 ABC 3 transport family LLCC_RS03675 PF00849 RNA pseudouridylate synthase LLCC_RS03675 PF01479 S4 domain LLCC_RS03690 PF04239 Protein of unknown function (DUF421) LLCC_RS03695 PF00905 Penicillin binding protein transpeptidase domain LLCC_RS03695 PF00912 Transglycosylase LLCC_RS03700 PF01757 Acyltransferase family LLCC_RS03705 PF00471 Ribosomal protein L33 LLCC_RS03715 PF02357 Transcription termination factor nusG LLCC_RS03715 PF00467 KOW motif LLCC_RS03720 PF00291 Pyridoxal-phosphate dependent enzyme LLCC_RS03730 PF01741 Large-conductance mechanosensitive channel, MscL LLCC_RS03735 PF00338 Ribosomal protein S10p/S20e LLCC_RS03740 PF00297 Ribosomal protein L3 LLCC_RS03745 PF00573 Ribosomal protein L4/L1 family LLCC_RS03750 PF00276 Ribosomal protein L23 LLCC_RS03755 PF03947 Ribosomal Proteins L2, C-terminal domain LLCC_RS03755 PF00181 Ribosomal Proteins L2, RNA binding domain LLCC_RS03760 PF00203 Ribosomal protein S19 LLCC_RS03765 PF00237 Ribosomal protein L22p/L17e LLCC_RS03770 PF07650 KH domain LLCC_RS03770 PF00189 Ribosomal protein S3, C-terminal domain LLCC_RS03775 PF00252 Ribosomal protein L16p/L10e LLCC_RS03780 PF00831 Ribosomal L29 protein LLCC_RS03785 PF00366 Ribosomal protein S17 LLCC_RS03790 PF00238 Ribosomal protein L14p/L23e LLCC_RS03795 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LLCC_RS03795 PF00467 KOW motif LLCC_RS03800 PF00673 ribosomal L5P family C-terminus LLCC_RS03800 PF00281 Ribosomal protein L5 LLCC_RS03805 PF00253 Ribosomal protein S14p/S29e LLCC_RS03815 PF00410 Ribosomal protein S8 LLCC_RS03820 PF00347 Ribosomal protein L6 LLCC_RS03825 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LLCC_RS03830 PF03719 Ribosomal protein S5, C-terminal domain LLCC_RS03830 PF00333 Ribosomal protein S5, N-terminal domain LLCC_RS03835 PF00327 Ribosomal protein L30p/L7e LLCC_RS03840 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LLCC_RS03845 PF00344 SecY translocase LLCC_RS03850 PF05191 Adenylate kinase, active site lid LLCC_RS03855 PF01176 Translation initiation factor 1A / IF-1 LLCC_RS03860 PF00444 Ribosomal protein L36 LLCC_RS03865 PF00416 Ribosomal protein S13/S18 LLCC_RS03870 PF00411 Ribosomal protein S11 LLCC_RS03875 PF01000 RNA polymerase Rpb3/RpoA insert domain LLCC_RS03875 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LLCC_RS03875 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LLCC_RS03880 PF01196 Ribosomal protein L17 LLCC_RS03895 PF00535 Glycosyl transferase family 2 LLCC_RS03920 PF13580 SIS domain LLCC_RS03930 PF01501 Glycosyl transferase family 8 LLCC_RS03930 PF00535 Glycosyl transferase family 2 LLCC_RS03935 PF18073 Rubredoxin metal binding domain LLCC_RS03975 PF13936 Helix-turn-helix domain LLCC_RS03995 PF00857 Isochorismatase family LLCC_RS04005 PF00749 tRNA synthetases class I (E and Q), catalytic domain LLCC_RS04010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LLCC_RS04010 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLCC_RS04015 PF00497 Bacterial extracellular solute-binding proteins, family 3 LLCC_RS04025 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal LLCC_RS04025 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LLCC_RS04025 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LLCC_RS04030 PF00230 Major intrinsic protein LLCC_RS04035 PF02517 CPBP intramembrane metalloprotease LLCC_RS04050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LLCC_RS04050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LLCC_RS04060 PF00872 Transposase, Mutator family LLCC_RS04095 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LLCC_RS04095 PF05257 CHAP domain LLCC_RS04120 PF00271 Helicase conserved C-terminal domain LLCC_RS04120 PF00176 SNF2 family N-terminal domain LLCC_RS04120 PF04434 SWIM zinc finger LLCC_RS04130 PF08245 Mur ligase middle domain LLCC_RS04130 PF02875 Mur ligase family, glutamate ligase domain LLCC_RS04130 PF01225 Mur ligase family, catalytic domain LLCC_RS04135 PF01316 Arginine repressor, DNA binding domain LLCC_RS04135 PF02863 Arginine repressor, C-terminal domain LLCC_RS04140 PF00750 tRNA synthetases class I (R) LLCC_RS04140 PF05746 DALR anticodon binding domain LLCC_RS04140 PF03485 Arginyl tRNA synthetase N terminal domain LLCC_RS04150 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LLCC_RS04150 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LLCC_RS04165 PF00696 Amino acid kinase family LLCC_RS04170 PF00155 Aminotransferase class I and II LLCC_RS04175 PF13520 Amino acid permease LLCC_RS04185 PF11798 IMS family HHH motif LLCC_RS04185 PF11799 impB/mucB/samB family C-terminal domain LLCC_RS04185 PF00817 impB/mucB/samB family LLCC_RS04190 PF06750 Bacterial Peptidase A24 N-terminal domain LLCC_RS04190 PF01478 Type IV leader peptidase family LLCC_RS04195 PF00210 Ferritin-like domain LLCC_RS04205 PF00480 ROK family LLCC_RS04245 PF14492 Elongation Factor G, domain II LLCC_RS04245 PF00679 Elongation factor G C-terminus LLCC_RS04245 PF00009 Elongation factor Tu GTP binding domain LLCC_RS04245 PF03144 Elongation factor Tu domain 2 LLCC_RS04255 PF02384 N-6 DNA Methylase LLCC_RS04260 PF00871 Acetokinase family LLCC_RS04265 PF00871 Acetokinase family LLCC_RS04275 PF00696 Amino acid kinase family LLCC_RS04280 PF01765 Ribosome recycling factor LLCC_RS04290 PF17783 CvfB-like winged helix domain LLCC_RS04290 PF13509 S1 domain LLCC_RS04295 PF01625 Peptide methionine sulfoxide reductase LLCC_RS04300 PF06855 YozE SAM-like fold LLCC_RS04305 PF00005 ABC transporter LLCC_RS04315 PF00298 Ribosomal protein L11, RNA binding domain LLCC_RS04315 PF03946 Ribosomal protein L11, N-terminal domain LLCC_RS04320 PF00687 Ribosomal protein L1p/L10e family LLCC_RS04335 PF01230 HIT domain LLCC_RS04345 PF00005 ABC transporter LLCC_RS04355 PF03932 CutC family LLCC_RS04440 PF10668 Phage terminase small subunit LLCC_RS04440 PF03592 Terminase small subunit LLCC_RS04450 PF08241 Methyltransferase domain LLCC_RS04465 PF01136 Peptidase family U32 LLCC_RS04465 PF16325 Peptidase family U32 C-terminal domain LLCC_RS04470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LLCC_RS04475 PF01381 Helix-turn-helix LLCC_RS04475 PF13521 AAA domain LLCC_RS04480 PF00248 Aldo/keto reductase family LLCC_RS04490 PF01418 Helix-turn-helix domain, rpiR family LLCC_RS04490 PF01380 SIS domain LLCC_RS04495 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LLCC_RS04500 PF01263 Aldose 1-epimerase LLCC_RS04505 PF10509 Galactokinase galactose-binding signature LLCC_RS04505 PF08544 GHMP kinases C terminal LLCC_RS04505 PF00288 GHMP kinases N terminal domain LLCC_RS04510 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain LLCC_RS04510 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain LLCC_RS04515 PF16363 GDP-mannose 4,6 dehydratase LLCC_RS04525 PF09278 MerR, DNA binding LLCC_RS04525 PF00376 MerR family regulatory protein LLCC_RS04530 PF02627 Carboxymuconolactone decarboxylase family LLCC_RS04535 PF02463 RecF/RecN/SMC N terminal domain LLCC_RS04545 PF05193 Peptidase M16 inactive domain LLCC_RS04550 PF00675 Insulinase (Peptidase family M16) LLCC_RS04550 PF05193 Peptidase M16 inactive domain LLCC_RS04555 PF13464 Domain of unknown function (DUF4115) LLCC_RS04560 PF01066 CDP-alcohol phosphatidyltransferase LLCC_RS04585 PF03129 Anticodon binding domain LLCC_RS04585 PF13393 Histidyl-tRNA synthetase LLCC_RS04590 PF01230 HIT domain LLCC_RS04595 PF01336 OB-fold nucleic acid binding domain LLCC_RS04595 PF00152 tRNA synthetases class II (D, K and N) LLCC_RS04595 PF02938 GAD domain LLCC_RS04600 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LLCC_RS04600 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LLCC_RS04605 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LLCC_RS04605 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LLCC_RS04610 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LLCC_RS04610 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LLCC_RS04620 PF01207 Dihydrouridine synthase (Dus) LLCC_RS04665 PF01430 Hsp33 protein LLCC_RS04675 PF00709 Adenylosuccinate synthetase LLCC_RS04680 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LLCC_RS04680 PF18416 N-acetylglucosamine binding protein domain 2 LLCC_RS04685 PF00704 Glycosyl hydrolases family 18 LLCC_RS04700 PF05870 Phenolic acid decarboxylase (PAD) LLCC_RS04705 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LLCC_RS04705 PF01409 tRNA synthetases class II core domain (F) LLCC_RS04710 PF03147 Ferredoxin-fold anticodon binding domain LLCC_RS04710 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LLCC_RS04710 PF03484 tRNA synthetase B5 domain LLCC_RS04710 PF03483 B3/4 domain LLCC_RS04710 PF01588 Putative tRNA binding domain LLCC_RS04715 PF13936 Helix-turn-helix domain LLCC_RS04720 PF01476 LysM domain LLCC_RS04720 PF06725 3D domain LLCC_RS04725 PF16745 RsgA N-terminal domain LLCC_RS04725 PF03193 RsgA GTPase LLCC_RS04740 PF00834 Ribulose-phosphate 3 epimerase family LLCC_RS04745 PF02646 RmuC family LLCC_RS04750 PF01966 HD domain LLCC_RS04780 PF00155 Aminotransferase class I and II LLCC_RS04785 PF00999 Sodium/hydrogen exchanger family LLCC_RS04800 PF01566 Natural resistance-associated macrophage protein LLCC_RS04805 PF01566 Natural resistance-associated macrophage protein LLCC_RS04815 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LLCC_RS04815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LLCC_RS04815 PF03129 Anticodon binding domain LLCC_RS04815 PF02824 TGS domain LLCC_RS04820 PF03458 UPF0126 domain LLCC_RS04880 PF01116 Fructose-bisphosphate aldolase class-II LLCC_RS04885 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LLCC_RS04885 PF05257 CHAP domain LLCC_RS04905 PF03099 Biotin/lipoate A/B protein ligase family LLCC_RS04905 PF02237 Biotin protein ligase C terminal domain LLCC_RS04915 PF00438 S-adenosylmethionine synthetase, N-terminal domain LLCC_RS04915 PF02772 S-adenosylmethionine synthetase, central domain LLCC_RS04915 PF02773 S-adenosylmethionine synthetase, C-terminal domain LLCC_RS04920 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LLCC_RS04925 PF00013 KH domain LLCC_RS04925 PF01966 HD domain LLCC_RS04925 PF12072 Domain of unknown function (DUF3552) LLCC_RS04930 PF00625 Guanylate kinase LLCC_RS04935 PF01192 RNA polymerase Rpb6 LLCC_RS04940 PF00271 Helicase conserved C-terminal domain LLCC_RS04940 PF18074 Primosomal protein N C-terminal domain LLCC_RS04940 PF17764 3′ DNA-binding domain (3′BD) LLCC_RS04940 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LLCC_RS04940 PF04851 Type III restriction enzyme, res subunit LLCC_RS04965 PF00551 Formyl transferase LLCC_RS04965 PF02911 Formyl transferase, C-terminal domain LLCC_RS04970 PF04226 Transglycosylase associated protein LLCC_RS04985 PF03780 Asp23 family, cell envelope-related function LLCC_RS05100 PF04688 SPP1 phage holin LLCC_RS05110 PF00535 Glycosyl transferase family 2 LLCC_RS05120 PF01029 NusB family LLCC_RS05120 PF01189 16S rRNA methyltransferase RsmB/F LLCC_RS05130 PF03793 PASTA domain LLCC_RS05130 PF00069 Protein kinase domain LLCC_RS05135 PF00312 Ribosomal protein S15 LLCC_RS05140 PF14748 Pyrroline-5-carboxylate reductase dimerisation LLCC_RS05140 PF03807 NADP oxidoreductase coenzyme F420-dependent LLCC_RS05145 PF14602 Hexapeptide repeat of succinyl-transferase LLCC_RS05145 PF12804 MobA-like NTP transferase domain LLCC_RS05150 PF00293 NUDIX domain LLCC_RS05160 PF01048 Phosphorylase superfamily LLCC_RS05175 PF03051 Peptidase C1-like family LLCC_RS05200 PF01266 FAD dependent oxidoreductase LLCC_RS05210 PF00588 SpoU rRNA Methylase family LLCC_RS05210 PF08032 RNA 2'-O ribose methyltransferase substrate binding LLCC_RS05215 PF02645 Uncharacterised protein, DegV family COG1307 LLCC_RS05220 PF02491 SHS2 domain inserted in FTSA LLCC_RS05220 PF11983 Membrane-attachment and polymerisation-promoting switch LLCC_RS05225 PF12327 FtsZ family, C-terminal domain LLCC_RS05225 PF00091 Tubulin/FtsZ family, GTPase domain LLCC_RS05230 PF01168 Alanine racemase, N-terminal domain LLCC_RS05235 PF04472 Cell division protein SepF LLCC_RS05245 PF01479 S4 domain LLCC_RS05245 PF17774 Putative RNA-binding domain in YlmH LLCC_RS05250 PF05103 DivIVA protein LLCC_RS05255 PF06827 Zinc finger found in FPG and IleRS LLCC_RS05255 PF00133 tRNA synthetases class I (I, L, M and V) LLCC_RS05255 PF08264 Anticodon-binding domain of tRNA LLCC_RS05270 PF00009 Elongation factor Tu GTP binding domain LLCC_RS05270 PF03143 Elongation factor Tu C-terminal domain LLCC_RS05270 PF03144 Elongation factor Tu domain 2 LLCC_RS05280 PF00266 Aminotransferase class-V LLCC_RS05285 PF00582 Universal stress protein family LLCC_RS05290 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LLCC_RS05290 PF14572 Phosphoribosyl synthetase-associated domain LLCC_RS05300 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LLCC_RS05300 PF00575 S1 RNA binding domain LLCC_RS05300 PF03725 3' exoribonuclease family, domain 2 LLCC_RS05300 PF01138 3' exoribonuclease family, domain 1 LLCC_RS05300 PF00013 KH domain LLCC_RS05310 PF00132 Bacterial transferase hexapeptide (six repeats) LLCC_RS05315 PF06736 Protein of unknown function (DUF1211) LLCC_RS05320 PF09190 DALR domain LLCC_RS05320 PF01406 tRNA synthetases class I (C) catalytic domain LLCC_RS05325 PF00636 Ribonuclease III domain LLCC_RS05340 PF01134 Glucose inhibited division protein A LLCC_RS05340 PF13932 GidA associated domain LLCC_RS05360 PF00707 Translation initiation factor IF-3, C-terminal domain LLCC_RS05360 PF05198 Translation initiation factor IF-3, N-terminal domain LLCC_RS05365 PF01632 Ribosomal protein L35 LLCC_RS05370 PF00453 Ribosomal protein L20 LLCC_RS05375 PF00005 ABC transporter LLCC_RS05375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LLCC_RS05390 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS05395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LLCC_RS05405 PF00929 Exonuclease LLCC_RS05405 PF04851 Type III restriction enzyme, res subunit LLCC_RS05405 PF13307 Helicase C-terminal domain LLCC_RS05415 PF00155 Aminotransferase class I and II LLCC_RS05425 PF01336 OB-fold nucleic acid binding domain LLCC_RS05425 PF00152 tRNA synthetases class II (D, K and N) LLCC_RS05445 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain LLCC_RS05445 PF04263 Thiamin pyrophosphokinase, catalytic domain LLCC_RS05455 PF00324 Amino acid permease LLCC_RS05460 PF01541 GIY-YIG catalytic domain LLCC_RS05470 PF00005 ABC transporter LLCC_RS05470 PF17755 UvrA DNA-binding domain LLCC_RS05470 PF17760 UvrA interaction domain LLCC_RS05475 PF03167 Uracil DNA glycosylase superfamily LLCC_RS05505 PF01594 AI-2E family transporter LLCC_RS05510 PF03471 Transporter associated domain LLCC_RS05510 PF01595 Cyclin M transmembrane N-terminal domain LLCC_RS05510 PF00571 CBS domain LLCC_RS05515 PF04055 Radical SAM superfamily LLCC_RS05520 PF02833 DHHA2 domain LLCC_RS05520 PF01368 DHH family LLCC_RS05530 PF01546 Peptidase family M20/M25/M40 LLCC_RS05530 PF07687 Peptidase dimerisation domain LLCC_RS05550 PF16124 RecQ zinc-binding LLCC_RS05550 PF00270 DEAD/DEAH box helicase LLCC_RS05550 PF00271 Helicase conserved C-terminal domain LLCC_RS05550 PF09382 RQC domain LLCC_RS05550 PF00570 HRDC domain LLCC_RS05565 PF08245 Mur ligase middle domain LLCC_RS05565 PF02875 Mur ligase family, glutamate ligase domain LLCC_RS05570 PF14667 Polysaccharide biosynthesis C-terminal domain LLCC_RS05570 PF01943 Polysaccharide biosynthesis protein LLCC_RS05590 PF01381 Helix-turn-helix LLCC_RS05595 PF06018 CodY GAF-like domain LLCC_RS05595 PF08222 CodY helix-turn-helix domain LLCC_RS05600 PF10385 RNA polymerase beta subunit external 1 domain LLCC_RS05600 PF00562 RNA polymerase Rpb2, domain 6 LLCC_RS05600 PF04561 RNA polymerase Rpb2, domain 2 LLCC_RS05600 PF04565 RNA polymerase Rpb2, domain 3 LLCC_RS05600 PF04563 RNA polymerase beta subunit LLCC_RS05600 PF04560 RNA polymerase Rpb2, domain 7 LLCC_RS05605 PF05000 RNA polymerase Rpb1, domain 4 LLCC_RS05605 PF04998 RNA polymerase Rpb1, domain 5 LLCC_RS05605 PF04983 RNA polymerase Rpb1, domain 3 LLCC_RS05605 PF04997 RNA polymerase Rpb1, domain 1 LLCC_RS05605 PF00623 RNA polymerase Rpb1, domain 2 LLCC_RS05615 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS05620 PF00005 ABC transporter LLCC_RS05625 PF05389 Negative regulator of genetic competence (MecA) LLCC_RS05630 PF00953 Glycosyl transferase family 4 LLCC_RS05635 PF00005 ABC transporter LLCC_RS05640 PF01458 Uncharacterized protein family (UPF0051) LLCC_RS05645 PF00266 Aminotransferase class-V LLCC_RS05655 PF01592 NifU-like N terminal domain LLCC_RS05660 PF01458 Uncharacterized protein family (UPF0051) LLCC_RS05665 PF06013 Proteins of 100 residues with WXG LLCC_RS05690 PF02632 BioY family LLCC_RS05705 PF03070 TENA/THI-4/PQQC family LLCC_RS05725 PF00005 ABC transporter LLCC_RS05725 PF13732 Domain of unknown function (DUF4162) LLCC_RS05755 PF00756 Putative esterase LLCC_RS05760 PF00137 ATP synthase subunit C LLCC_RS05765 PF00119 ATP synthase A chain LLCC_RS05770 PF00430 ATP synthase B/B' CF(0) LLCC_RS05775 PF00213 ATP synthase delta (OSCP) subunit LLCC_RS05780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LLCC_RS05780 PF02874 ATP synthase alpha/beta family, beta-barrel domain LLCC_RS05780 PF00306 ATP synthase alpha/beta chain, C terminal domain LLCC_RS05785 PF00231 ATP synthase LLCC_RS05790 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LLCC_RS05790 PF02874 ATP synthase alpha/beta family, beta-barrel domain LLCC_RS05795 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LLCC_RS05795 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LLCC_RS05825 PF00005 ABC transporter LLCC_RS05830 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS05835 PF09335 SNARE associated Golgi protein LLCC_RS05840 PF08501 Shikimate dehydrogenase substrate binding domain LLCC_RS05840 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LLCC_RS05845 PF01761 3-dehydroquinate synthase LLCC_RS05855 PF06335 Protein of unknown function (DUF1054) LLCC_RS05860 PF13419 Haloacid dehalogenase-like hydrolase LLCC_RS05865 PF01264 Chorismate synthase LLCC_RS05875 PF00005 ABC transporter LLCC_RS05880 PF02687 FtsX-like permease family LLCC_RS05885 PF13936 Helix-turn-helix domain LLCC_RS05895 PF00486 Transcriptional regulatory protein, C terminal LLCC_RS05895 PF00072 Response regulator receiver domain LLCC_RS05905 PF02153 Prephenate dehydrogenase LLCC_RS05910 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LLCC_RS05915 PF01202 Shikimate kinase LLCC_RS05920 PF00800 Prephenate dehydratase LLCC_RS05925 PF00300 Histidine phosphatase superfamily (branch 1) LLCC_RS05930 PF14490 Helix-hairpin-helix containing domain LLCC_RS05930 PF13538 UvrD-like helicase C-terminal domain LLCC_RS05930 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LLCC_RS05935 PF01649 Ribosomal protein S20 LLCC_RS05945 PF00781 Diacylglycerol kinase catalytic domain LLCC_RS05955 PF01381 Helix-turn-helix LLCC_RS06035 PF01027 Inhibitor of apoptosis-promoting Bax1 LLCC_RS06040 PF02589 LUD domain LLCC_RS06050 PF02754 Cysteine-rich domain LLCC_RS06060 PF00860 Permease family LLCC_RS06080 PF01432 Peptidase family M3 LLCC_RS06080 PF08439 Oligopeptidase F LLCC_RS06085 PF01596 O-methyltransferase LLCC_RS06090 PF13145 PPIC-type PPIASE domain LLCC_RS06095 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LLCC_RS06095 PF01411 tRNA synthetases class II (A) LLCC_RS06095 PF02272 DHHA1 domain LLCC_RS06105 PF00881 Nitroreductase family LLCC_RS06115 PF01668 SmpB protein LLCC_RS06120 PF12849 PBP superfamily domain LLCC_RS06125 PF12849 PBP superfamily domain LLCC_RS06130 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS06135 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS06140 PF00005 ABC transporter LLCC_RS06145 PF00005 ABC transporter LLCC_RS06150 PF01895 PhoU domain LLCC_RS06175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LLCC_RS06175 PF02403 Seryl-tRNA synthetase N-terminal domain LLCC_RS06195 PF03613 PTS system mannose/fructose/sorbose family IID component LLCC_RS06200 PF03609 PTS system sorbose-specific iic component LLCC_RS06205 PF03830 PTS system sorbose subfamily IIB component LLCC_RS06205 PF03610 PTS system fructose IIA component LLCC_RS06220 PF02224 Cytidylate kinase LLCC_RS06225 PF03816 Cell envelope-related transcriptional attenuator domain LLCC_RS06250 PF00356 Bacterial regulatory proteins, lacI family LLCC_RS06255 PF00072 Response regulator receiver domain LLCC_RS06255 PF00486 Transcriptional regulatory protein, C terminal LLCC_RS06260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLCC_RS06260 PF00512 His Kinase A (phospho-acceptor) domain LLCC_RS06270 PF01809 Putative membrane protein insertion efficiency factor LLCC_RS06275 PF00232 Glycosyl hydrolase family 1 LLCC_RS06280 PF01061 ABC-2 type transporter LLCC_RS06285 PF01209 ubiE/COQ5 methyltransferase family LLCC_RS06315 PF00654 Voltage gated chloride channel LLCC_RS06325 PF01464 Transglycosylase SLT domain LLCC_RS06340 PF00485 Phosphoribulokinase / Uridine kinase family LLCC_RS06345 PF01515 Phosphate acetyl/butaryl transferase LLCC_RS06360 PF09397 Ftsk gamma domain LLCC_RS06360 PF17854 FtsK alpha domain LLCC_RS06360 PF01580 FtsK/SpoIIIE family LLCC_RS06370 PF06144 DNA polymerase III, delta subunit LLCC_RS06375 PF05103 DivIVA protein LLCC_RS06385 PF01170 Putative RNA methylase family UPF0020 LLCC_RS06385 PF02926 THUMP domain LLCC_RS06390 PF18041 MapZ extracellular domain 1 LLCC_RS06390 PF18041 MapZ extracellular domain 1 LLCC_RS06390 PF18708 MapZ extracellular C-terminal domain 2 LLCC_RS06390 PF18708 MapZ extracellular C-terminal domain 2 LLCC_RS06395 PF01321 Creatinase/Prolidase N-terminal domain LLCC_RS06395 PF00557 Metallopeptidase family M24 LLCC_RS06400 PF00356 Bacterial regulatory proteins, lacI family LLCC_RS06405 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLCC_RS06410 PF02674 Colicin V production protein LLCC_RS06415 PF00488 MutS domain V LLCC_RS06415 PF01713 Smr domain LLCC_RS06420 PF00085 Thioredoxin LLCC_RS06435 PF01487 Type I 3-dehydroquinase LLCC_RS06440 PF00206 Lyase LLCC_RS06440 PF10397 Adenylosuccinate lyase C-terminus LLCC_RS06445 PF00356 Bacterial regulatory proteins, lacI family LLCC_RS06455 PF05025 RbsD / FucU transport protein family LLCC_RS06470 PF13407 Periplasmic binding protein domain LLCC_RS06480 PF00717 Peptidase S24-like LLCC_RS06480 PF01726 LexA DNA binding domain LLCC_RS06495 PF10548 P22AR C-terminal domain LLCC_RS06495 PF08346 AntA/AntB antirepressor LLCC_RS06525 PF04098 Rad52/22 family double-strand break repair protein LLCC_RS06590 PF00692 dUTPase LLCC_RS06615 PF00872 Transposase, Mutator family LLCC_RS06750 PF01476 LysM domain LLCC_RS06750 PF01464 Transglycosylase SLT domain LLCC_RS06795 PF07690 Major Facilitator Superfamily LLCC_RS06800 PF00392 Bacterial regulatory proteins, gntR family LLCC_RS06800 PF07729 FCD domain LLCC_RS06810 PF03786 D-mannonate dehydratase (UxuA) LLCC_RS06835 PF01081 KDPG and KHG aldolase LLCC_RS06840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LLCC_RS06850 PF03611 PTS system sugar-specific permease component LLCC_RS06855 PF02779 Transketolase, pyrimidine binding domain LLCC_RS06855 PF02780 Transketolase, C-terminal domain LLCC_RS06855 PF00456 Transketolase, thiamine diphosphate binding domain LLCC_RS06870 PF01118 Semialdehyde dehydrogenase, NAD binding domain LLCC_RS06870 PF02774 Semialdehyde dehydrogenase, dimerisation domain LLCC_RS06875 PF00293 NUDIX domain LLCC_RS06880 PF00701 Dihydrodipicolinate synthetase family LLCC_RS06885 PF02308 MgtC family LLCC_RS06890 PF00753 Metallo-beta-lactamase superfamily LLCC_RS06890 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LLCC_RS06890 PF17770 Ribonuclease J C-terminal domain LLCC_RS06900 PF00448 SRP54-type protein, GTPase domain LLCC_RS06900 PF02881 SRP54-type protein, helical bundle domain LLCC_RS06900 PF02978 Signal peptide binding domain LLCC_RS06905 PF13302 Acetyltransferase (GNAT) domain LLCC_RS06935 PF00696 Amino acid kinase family LLCC_RS06940 PF00171 Aldehyde dehydrogenase family LLCC_RS06945 PF01545 Cation efflux family LLCC_RS06950 PF01022 Bacterial regulatory protein, arsR family LLCC_RS06960 PF00156 Phosphoribosyl transferase domain LLCC_RS06965 PF00860 Permease family LLCC_RS06970 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LLCC_RS06970 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LLCC_RS06975 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LLCC_RS06975 PF00117 Glutamine amidotransferase class-I LLCC_RS07015 PF01451 Low molecular weight phosphotyrosine protein phosphatase LLCC_RS07025 PF00872 Transposase, Mutator family LLCC_RS07035 PF05257 CHAP domain LLCC_RS07035 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LLCC_RS07045 PF01197 Ribosomal protein L31 LLCC_RS07055 PF00072 Response regulator receiver domain LLCC_RS07055 PF00486 Transcriptional regulatory protein, C terminal LLCC_RS07060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLCC_RS07060 PF00512 His Kinase A (phospho-acceptor) domain LLCC_RS07060 PF18719 ArlS sensor domain LLCC_RS07065 PF00909 Ammonium Transporter Family LLCC_RS07070 PF00543 Nitrogen regulatory protein P-II LLCC_RS07075 PF08245 Mur ligase middle domain LLCC_RS07075 PF02875 Mur ligase family, glutamate ligase domain LLCC_RS07080 PF04101 Glycosyltransferase family 28 C-terminal domain LLCC_RS07080 PF03033 Glycosyltransferase family 28 N-terminal domain LLCC_RS07085 PF08478 POTRA domain, FtsQ-type LLCC_RS07085 PF03799 Cell division protein FtsQ LLCC_RS07090 PF01018 GTP1/OBG LLCC_RS07090 PF09269 Domain of unknown function (DUF1967) LLCC_RS07090 PF01926 50S ribosome-binding GTPase LLCC_RS07105 PF02547 Queuosine biosynthesis protein LLCC_RS07115 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LLCC_RS07120 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal LLCC_RS07120 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal LLCC_RS07125 PF00108 Thiolase, N-terminal domain LLCC_RS07125 PF02803 Thiolase, C-terminal domain LLCC_RS07130 PF00368 Hydroxymethylglutaryl-coenzyme A reductase LLCC_RS07135 PF00886 Ribosomal protein S16 LLCC_RS07145 PF00762 Ferrochelatase LLCC_RS07155 PF01782 RimM N-terminal domain LLCC_RS07155 PF05239 PRC-barrel domain LLCC_RS07160 PF01746 tRNA (Guanine-1)-methyltransferase LLCC_RS07170 PF02645 Uncharacterised protein, DegV family COG1307 LLCC_RS07175 PF05173 Dihydrodipicolinate reductase, C-terminus LLCC_RS07175 PF01113 Dihydrodipicolinate reductase, N-terminus LLCC_RS07185 PF01743 Poly A polymerase head domain LLCC_RS07185 PF13735 tRNA nucleotidyltransferase domain 2 putative LLCC_RS07185 PF12627 Probable RNA and SrmB- binding site of polymerase A LLCC_RS07190 PF03577 Peptidase family C69 LLCC_RS07200 PF00465 Iron-containing alcohol dehydrogenase LLCC_RS07205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLCC_RS07205 PF03466 LysR substrate binding domain LLCC_RS07210 PF12848 ABC transporter LLCC_RS07210 PF16326 ABC transporter C-terminal domain LLCC_RS07210 PF00005 ABC transporter LLCC_RS07220 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LLCC_RS07220 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LLCC_RS07225 PF01625 Peptide methionine sulfoxide reductase LLCC_RS07230 PF01180 Dihydroorotate dehydrogenase LLCC_RS07250 PF00356 Bacterial regulatory proteins, lacI family LLCC_RS07255 PF00834 Ribulose-phosphate 3 epimerase family LLCC_RS07260 PF02502 Ribose/Galactose Isomerase LLCC_RS07265 PF00232 Glycosyl hydrolase family 1 LLCC_RS07285 PF00303 Thymidylate synthase LLCC_RS07295 PF01047 MarR family LLCC_RS07300 PF07690 Major Facilitator Superfamily LLCC_RS07305 PF00106 short chain dehydrogenase LLCC_RS07315 PF02627 Carboxymuconolactone decarboxylase family LLCC_RS07330 PF01259 SAICAR synthetase LLCC_RS07345 PF02769 AIR synthase related protein, C-terminal domain LLCC_RS07345 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LLCC_RS07345 PF00586 AIR synthase related protein, N-terminal domain LLCC_RS07350 PF00156 Phosphoribosyl transferase domain LLCC_RS07350 PF13537 Glutamine amidotransferase domain LLCC_RS07370 PF02861 Clp amino terminal domain, pathogenicity island component LLCC_RS07370 PF17871 AAA lid domain LLCC_RS07370 PF00004 ATPase family associated with various cellular activities (AAA) LLCC_RS07370 PF10431 C-terminal, D2-small domain, of ClpB protein LLCC_RS07370 PF07724 AAA domain (Cdc48 subfamily) LLCC_RS07375 PF02769 AIR synthase related protein, C-terminal domain LLCC_RS07375 PF00586 AIR synthase related protein, N-terminal domain LLCC_RS07380 PF00551 Formyl transferase LLCC_RS07400 PF00156 Phosphoribosyl transferase domain LLCC_RS07400 PF11734 TilS substrate C-terminal domain LLCC_RS07400 PF01171 PP-loop family LLCC_RS07405 PF02142 MGS-like domain LLCC_RS07405 PF01808 AICARFT/IMPCHase bienzyme LLCC_RS07410 PF13419 Haloacid dehalogenase-like hydrolase LLCC_RS07425 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LLCC_RS07425 PF02843 Phosphoribosylglycinamide synthetase, C domain LLCC_RS07425 PF02844 Phosphoribosylglycinamide synthetase, N domain LLCC_RS07435 PF00731 AIR carboxylase LLCC_RS07440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LLCC_RS07440 PF02222 ATP-grasp domain LLCC_RS07440 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LLCC_RS07450 PF01261 Xylose isomerase-like TIM barrel LLCC_RS07455 PF00457 Glycosyl hydrolases family 11 LLCC_RS07465 PF00480 ROK family LLCC_RS07470 PF00958 GMP synthase C terminal domain LLCC_RS07470 PF00117 Glutamine amidotransferase class-I LLCC_RS07470 PF02540 NAD synthase LLCC_RS07475 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS07480 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS07485 PF01547 Bacterial extracellular solute-binding protein LLCC_RS07510 PF01047 MarR family LLCC_RS07515 PF02780 Transketolase, C-terminal domain LLCC_RS07515 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LLCC_RS07515 PF02779 Transketolase, pyrimidine binding domain LLCC_RS07540 PF01475 Ferric uptake regulator family LLCC_RS07565 PF00881 Nitroreductase family LLCC_RS07570 PF06993 Protein of unknown function (DUF1304) LLCC_RS07575 PF04715 Anthranilate synthase component I, N terminal region LLCC_RS07575 PF00425 chorismate binding enzyme LLCC_RS07580 PF00117 Glutamine amidotransferase class-I LLCC_RS07585 PF02885 Glycosyl transferase family, helical bundle domain LLCC_RS07585 PF00591 Glycosyl transferase family, a/b domain LLCC_RS07610 PF00218 Indole-3-glycerol phosphate synthase LLCC_RS07615 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LLCC_RS07625 PF00291 Pyridoxal-phosphate dependent enzyme LLCC_RS07630 PF00290 Tryptophan synthase alpha chain LLCC_RS07635 PF03123 CAT RNA binding domain LLCC_RS07635 PF00874 PRD domain LLCC_RS07640 PF02378 Phosphotransferase system, EIIC LLCC_RS07640 PF00367 phosphotransferase system, EIIB LLCC_RS07640 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LLCC_RS07645 PF00232 Glycosyl hydrolase family 1 LLCC_RS07655 PF00005 ABC transporter LLCC_RS07655 PF00571 CBS domain LLCC_RS07660 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS07675 PF13610 DDE domain LLCC_RS07690 PF01507 Phosphoadenosine phosphosulfate reductase family LLCC_RS07690 PF11922 Domain of unknown function (DUF3440) LLCC_RS07710 PF06146 Phosphate-starvation-inducible E LLCC_RS07715 PF00485 Phosphoribulokinase / Uridine kinase family LLCC_RS07720 PF05175 Methyltransferase small domain LLCC_RS07725 PF02885 Glycosyl transferase family, helical bundle domain LLCC_RS07725 PF00591 Glycosyl transferase family, a/b domain LLCC_RS07725 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain LLCC_RS07735 PF01791 DeoC/LacD family aldolase LLCC_RS07740 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LLCC_RS07745 PF02608 ABC transporter substrate-binding protein PnrA-like LLCC_RS07750 PF07702 UTRA domain LLCC_RS07750 PF00392 Bacterial regulatory proteins, gntR family LLCC_RS07765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLCC_RS07765 PF11808 Phosphate regulon sensor protein PhoR LLCC_RS07765 PF00512 His Kinase A (phospho-acceptor) domain LLCC_RS07765 PF00989 PAS fold LLCC_RS07770 PF00486 Transcriptional regulatory protein, C terminal LLCC_RS07770 PF00072 Response regulator receiver domain LLCC_RS07775 PF04297 Putative helix-turn-helix protein, YlxM / p13 like LLCC_RS07825 PF02677 Epoxyqueuosine reductase QueH LLCC_RS07830 PF00689 Cation transporting ATPase, C-terminus LLCC_RS07830 PF00690 Cation transporter/ATPase, N-terminus LLCC_RS07840 PF00255 Glutathione peroxidase LLCC_RS07845 PF02142 MGS-like domain LLCC_RS07845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LLCC_RS07845 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LLCC_RS07875 PF14659 Phage integrase, N-terminal SAM-like domain LLCC_RS07875 PF00589 Phage integrase family LLCC_RS07880 PF01726 LexA DNA binding domain LLCC_RS07880 PF00717 Peptidase S24-like LLCC_RS07940 PF01555 DNA methylase LLCC_RS07940 PF18755 Restriction Enzyme Adenine Methylase Associated LLCC_RS07970 PF00692 dUTPase LLCC_RS08040 PF00574 Clp protease LLCC_RS08130 PF01473 Putative cell wall binding repeat LLCC_RS08130 PF01510 N-acetylmuramoyl-L-alanine amidase LLCC_RS08165 PF00230 Major intrinsic protein LLCC_RS08170 PF01266 FAD dependent oxidoreductase LLCC_RS08170 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LLCC_RS08175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LLCC_RS08175 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LLCC_RS08180 PF00849 RNA pseudouridylate synthase LLCC_RS08215 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS08220 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS08250 PF07702 UTRA domain LLCC_RS08250 PF00392 Bacterial regulatory proteins, gntR family LLCC_RS08255 PF07690 Major Facilitator Superfamily LLCC_RS08260 PF00175 Oxidoreductase NAD-binding domain LLCC_RS08260 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B LLCC_RS08270 PF01180 Dihydroorotate dehydrogenase LLCC_RS08275 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LLCC_RS08285 PF02527 rRNA small subunit methyltransferase G LLCC_RS08290 PF00348 Polyprenyl synthetase LLCC_RS08305 PF00483 Nucleotidyl transferase LLCC_RS08310 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LLCC_RS08310 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LLCC_RS08320 PF05816 Toxic anion resistance protein (TelA) LLCC_RS08325 PF01979 Amidohydrolase family LLCC_RS08335 PF00365 Phosphofructokinase LLCC_RS08340 PF02887 Pyruvate kinase, alpha/beta domain LLCC_RS08340 PF00224 Pyruvate kinase, barrel domain LLCC_RS08345 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LLCC_RS08345 PF00056 lactate/malate dehydrogenase, NAD binding domain LLCC_RS08350 PF02653 Branched-chain amino acid transport system / permease component LLCC_RS08355 PF02653 Branched-chain amino acid transport system / permease component LLCC_RS08360 PF00005 ABC transporter LLCC_RS08365 PF13847 Methyltransferase domain LLCC_RS08370 PF05670 NFACT protein RNA binding domain LLCC_RS08390 PF03960 ArsC family LLCC_RS08395 PF02558 Ketopantoate reductase PanE/ApbA LLCC_RS08395 PF08546 Ketopantoate reductase PanE/ApbA C terminal LLCC_RS08400 PF12320 Type 5 capsule protein repressor C-terminal domain LLCC_RS08400 PF00149 Calcineurin-like phosphoesterase LLCC_RS08405 PF13476 AAA domain LLCC_RS08420 PF00005 ABC transporter LLCC_RS08430 PF01297 Zinc-uptake complex component A periplasmic LLCC_RS08455 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS08460 PF01270 Glycosyl hydrolases family 8 LLCC_RS08465 PF01522 Polysaccharide deacetylase LLCC_RS08465 PF00457 Glycosyl hydrolases family 11 LLCC_RS08465 PF03422 Carbohydrate binding module (family 6) LLCC_RS08485 PF00455 DeoR C terminal sensor domain LLCC_RS08485 PF08220 DeoR-like helix-turn-helix domain LLCC_RS08500 PF01926 50S ribosome-binding GTPase LLCC_RS08505 PF01351 Ribonuclease HII LLCC_RS08540 PF00924 Mechanosensitive ion channel LLCC_RS08545 PF01063 Amino-transferase class IV LLCC_RS08550 PF00132 Bacterial transferase hexapeptide (six repeats) LLCC_RS08550 PF12464 Maltose acetyltransferase LLCC_RS08555 PF01645 Conserved region in glutamate synthase LLCC_RS08555 PF01493 GXGXG motif LLCC_RS08555 PF00310 Glutamine amidotransferases class-II LLCC_RS08555 PF04898 Glutamate synthase central domain LLCC_RS08560 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLCC_RS08560 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LLCC_RS08565 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LLCC_RS08565 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LLCC_RS08570 PF03672 Uncharacterised protein family (UPF0154) LLCC_RS08575 PF01177 Asp/Glu/Hydantoin racemase LLCC_RS08580 PF01725 Ham1 family LLCC_RS08600 PF02616 Segregation and condensation protein ScpA LLCC_RS08605 PF04079 Segregation and condensation complex subunit ScpB LLCC_RS08610 PF00849 RNA pseudouridylate synthase LLCC_RS08610 PF01479 S4 domain LLCC_RS08615 PF12822 ECF transporter, substrate-specific component LLCC_RS08640 PF00005 ABC transporter LLCC_RS08640 PF00664 ABC transporter transmembrane region LLCC_RS08645 PF00005 ABC transporter LLCC_RS08645 PF00664 ABC transporter transmembrane region LLCC_RS08650 PF01381 Helix-turn-helix LLCC_RS08665 PF00466 Ribosomal protein L10 LLCC_RS08670 PF16320 Ribosomal protein L7/L12 dimerisation domain LLCC_RS08670 PF00542 Ribosomal protein L7/L12 C-terminal domain LLCC_RS08705 PF02110 Hydroxyethylthiazole kinase family LLCC_RS08710 PF08543 Phosphomethylpyrimidine kinase LLCC_RS08715 PF02581 Thiamine monophosphate synthase LLCC_RS08725 PF00501 AMP-binding enzyme LLCC_RS08725 PF13193 AMP-binding enzyme C-terminal domain LLCC_RS08730 PF03062 MBOAT, membrane-bound O-acyltransferase family LLCC_RS08735 PF00550 Phosphopantetheine attachment site LLCC_RS08740 PF04914 DltD protein LLCC_RS08745 PF00689 Cation transporting ATPase, C-terminus LLCC_RS08745 PF00690 Cation transporter/ATPase, N-terminus LLCC_RS08755 PF01717 Cobalamin-independent synthase, Catalytic domain LLCC_RS08755 PF08267 Cobalamin-independent synthase, N-terminal domain LLCC_RS08775 PF13610 DDE domain LLCC_RS08805 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase LLCC_RS08810 PF01380 SIS domain LLCC_RS08810 PF01418 Helix-turn-helix domain, rpiR family LLCC_RS08815 PF05958 tRNA (Uracil-5-)-methyltransferase LLCC_RS08825 PF08241 Methyltransferase domain LLCC_RS08830 PF01594 AI-2E family transporter LLCC_RS08840 PF00205 Thiamine pyrophosphate enzyme, central domain LLCC_RS08840 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LLCC_RS08840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LLCC_RS08845 PF07690 Major Facilitator Superfamily LLCC_RS08850 PF01638 HxlR-like helix-turn-helix LLCC_RS08865 PF17876 Cold shock domain LLCC_RS08865 PF00773 RNB domain LLCC_RS08865 PF00575 S1 RNA binding domain LLCC_RS08865 PF08206 Ribonuclease B OB domain LLCC_RS08870 PF03073 TspO/MBR family LLCC_RS08875 PF13610 DDE domain LLCC_RS08895 PF00815 Histidinol dehydrogenase LLCC_RS08900 PF00475 Imidazoleglycerol-phosphate dehydratase LLCC_RS08905 PF01636 Phosphotransferase enzyme family LLCC_RS08910 PF00117 Glutamine amidotransferase class-I LLCC_RS08915 PF00977 Histidine biosynthesis protein LLCC_RS08920 PF00977 Histidine biosynthesis protein LLCC_RS08925 PF01502 Phosphoribosyl-AMP cyclohydrolase LLCC_RS08925 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LLCC_RS08930 PF02811 PHP domain LLCC_RS08935 PF12368 Rhodanase C-terminal LLCC_RS08935 PF17773 UPF0176 acylphosphatase like domain LLCC_RS08935 PF00581 Rhodanese-like domain LLCC_RS08940 PF08502 LeuA allosteric (dimerisation) domain LLCC_RS08940 PF00682 HMGL-like LLCC_RS08955 PF00180 Isocitrate/isopropylmalate dehydrogenase LLCC_RS08960 PF00293 NUDIX domain LLCC_RS08970 PF00330 Aconitase family (aconitate hydratase) LLCC_RS08980 PF00694 Aconitase C-terminal domain LLCC_RS08985 PF00005 ABC transporter LLCC_RS08990 PF00920 Dehydratase family LLCC_RS08995 PF00205 Thiamine pyrophosphate enzyme, central domain LLCC_RS08995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LLCC_RS08995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LLCC_RS09000 PF10369 Small subunit of acetolactate synthase LLCC_RS09000 PF01842 ACT domain LLCC_RS09005 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LLCC_RS09005 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LLCC_RS09010 PF00291 Pyridoxal-phosphate dependent enzyme LLCC_RS09010 PF00585 C-terminal regulatory domain of Threonine dehydratase LLCC_RS09015 PF03306 Alpha-acetolactate decarboxylase LLCC_RS09020 PF01042 Endoribonuclease L-PSP LLCC_RS09025 PF02481 DNA recombination-mediator protein A LLCC_RS09025 PF18255 DNA processing protein A sterile alpha motif domain LLCC_RS09030 PF01396 Topoisomerase DNA binding C4 zinc finger LLCC_RS09030 PF01751 Toprim domain LLCC_RS09030 PF01131 DNA topoisomerase LLCC_RS09035 PF01134 Glucose inhibited division protein A LLCC_RS09040 PF13495 Phage integrase, N-terminal SAM-like domain LLCC_RS09040 PF00589 Phage integrase family LLCC_RS09070 PF13610 DDE domain LLCC_RS09080 PF02311 AraC-like ligand binding domain LLCC_RS09080 PF12833 Helix-turn-helix domain LLCC_RS09085 PF13416 Bacterial extracellular solute-binding protein LLCC_RS09090 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS09095 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS09100 PF08402 TOBE domain LLCC_RS09100 PF00005 ABC transporter LLCC_RS09105 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LLCC_RS09105 PF01565 FAD binding domain LLCC_RS09115 PF00288 GHMP kinases N terminal domain LLCC_RS09115 PF08544 GHMP kinases C terminal LLCC_RS09120 PF03447 Homoserine dehydrogenase, NAD binding domain LLCC_RS09120 PF00742 Homoserine dehydrogenase LLCC_RS09130 PF02875 Mur ligase family, glutamate ligase domain LLCC_RS09130 PF08245 Mur ligase middle domain LLCC_RS09135 PF00293 NUDIX domain LLCC_RS09140 PF00809 Pterin binding enzyme LLCC_RS09145 PF01227 GTP cyclohydrolase I LLCC_RS09145 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LLCC_RS09155 PF01926 50S ribosome-binding GTPase LLCC_RS09160 PF06689 ClpX C4-type zinc finger LLCC_RS09160 PF07724 AAA domain (Cdc48 subfamily) LLCC_RS09160 PF10431 C-terminal, D2-small domain, of ClpB protein LLCC_RS09170 PF00186 Dihydrofolate reductase LLCC_RS09175 PF00588 SpoU rRNA Methylase family LLCC_RS09185 PF00860 Permease family LLCC_RS09190 PF00156 Phosphoribosyl transferase domain LLCC_RS09220 PF00478 IMP dehydrogenase / GMP reductase domain LLCC_RS09230 PF13344 Haloacid dehalogenase-like hydrolase LLCC_RS09250 PF06969 HemN C-terminal domain LLCC_RS09250 PF04055 Radical SAM superfamily LLCC_RS09275 PF00121 Triosephosphate isomerase LLCC_RS09280 PF01380 SIS domain LLCC_RS09280 PF01418 Helix-turn-helix domain, rpiR family LLCC_RS09285 PF00367 phosphotransferase system, EIIB LLCC_RS09285 PF02378 Phosphotransferase system, EIIC LLCC_RS09290 PF01380 SIS domain LLCC_RS09300 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LLCC_RS09300 PF00056 lactate/malate dehydrogenase, NAD binding domain LLCC_RS09305 PF01687 Riboflavin kinase LLCC_RS09305 PF06574 FAD synthetase LLCC_RS09310 PF16198 tRNA pseudouridylate synthase B C-terminal domain LLCC_RS09310 PF01509 TruB family pseudouridylate synthase (N terminal domain) LLCC_RS09360 PF00890 FAD binding domain LLCC_RS09360 PF14537 Cytochrome c3 LLCC_RS09370 PF00958 GMP synthase C terminal domain LLCC_RS09370 PF03352 Methyladenine glycosylase LLCC_RS09370 PF13302 Acetyltransferase (GNAT) domain LLCC_RS09370 PF13673 Acetyltransferase (GNAT) domain LLCC_RS09370 PF00117 Glutamine amidotransferase class-I LLCC_RS09380 PF00580 UvrD/REP helicase N-terminal domain LLCC_RS09380 PF13361 UvrD-like helicase C-terminal domain LLCC_RS09395 PF09924 Uncharacterised conserved protein (DUF2156) LLCC_RS09395 PF00152 tRNA synthetases class II (D, K and N) LLCC_RS09395 PF16995 Transmembrane region of lysyl-tRNA synthetase LLCC_RS09395 PF01336 OB-fold nucleic acid binding domain LLCC_RS09400 PF04203 Sortase domain LLCC_RS09405 PF02424 ApbE family LLCC_RS09410 PF00521 DNA gyrase/topoisomerase IV, subunit A LLCC_RS09410 PF03989 DNA gyrase C-terminal domain, beta-propeller LLCC_RS09415 PF02384 N-6 DNA Methylase LLCC_RS09415 PF12161 HsdM N-terminal domain LLCC_RS09440 PF12008 Type I restriction and modification enzyme - subunit R C terminal LLCC_RS09440 PF18766 SWI2/SNF2 ATPase LLCC_RS09440 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LLCC_RS09450 PF13520 Amino acid permease LLCC_RS09455 PF13460 NAD(P)H-binding LLCC_RS09460 PF06421 GTP-binding protein LepA C-terminus LLCC_RS09460 PF03144 Elongation factor Tu domain 2 LLCC_RS09460 PF14492 Elongation Factor G, domain II LLCC_RS09460 PF00009 Elongation factor Tu GTP binding domain LLCC_RS09460 PF00679 Elongation factor G C-terminus LLCC_RS09465 PF03306 Alpha-acetolactate decarboxylase LLCC_RS09470 PF08353 Domain of unknown function (DUF1727) LLCC_RS09470 PF08245 Mur ligase middle domain LLCC_RS09475 PF07685 CobB/CobQ-like glutamine amidotransferase domain LLCC_RS09485 PF00005 ABC transporter LLCC_RS09490 PF02540 NAD synthase LLCC_RS09500 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LLCC_RS09500 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LLCC_RS09500 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain LLCC_RS09510 PF01467 Cytidylyltransferase-like LLCC_RS09515 PF00654 Voltage gated chloride channel LLCC_RS09520 PF05979 Bacterial protein of unknown function (DUF896) LLCC_RS09525 PF02092 Glycyl-tRNA synthetase beta subunit LLCC_RS09530 PF02091 Glycyl-tRNA synthetase alpha subunit LLCC_RS09540 PF02872 5'-nucleotidase, C-terminal domain LLCC_RS09540 PF00149 Calcineurin-like phosphoesterase LLCC_RS09550 PF04892 VanZ like family LLCC_RS09555 PF01205 Uncharacterized protein family UPF0029 LLCC_RS09555 PF09186 Domain of unknown function (DUF1949) LLCC_RS09575 PF01219 Prokaryotic diacylglycerol kinase LLCC_RS09580 PF02130 Uncharacterized protein family UPF0054 LLCC_RS09585 PF00293 NUDIX domain LLCC_RS09585 PF09297 NADH pyrophosphatase zinc ribbon domain LLCC_RS09590 PF02562 PhoH-like protein LLCC_RS09595 PF01566 Natural resistance-associated macrophage protein LLCC_RS09605 PF01016 Ribosomal L27 protein LLCC_RS09615 PF00829 Ribosomal prokaryotic L21 protein LLCC_RS09630 PF01966 HD domain LLCC_RS09645 PF01784 NIF3 (NGG1p interacting factor 3) LLCC_RS09650 PF04816 tRNA (adenine(22)-N(1))-methyltransferase LLCC_RS09655 PF00633 Helix-hairpin-helix motif LLCC_RS09655 PF10576 Iron-sulfur binding domain of endonuclease III LLCC_RS09655 PF00730 HhH-GPD superfamily base excision DNA repair protein LLCC_RS09690 PF01979 Amidohydrolase family LLCC_RS09695 PF00156 Phosphoribosyl transferase domain LLCC_RS09700 PF00005 ABC transporter LLCC_RS09700 PF16326 ABC transporter C-terminal domain LLCC_RS09700 PF12848 ABC transporter LLCC_RS09705 PF03960 ArsC family LLCC_RS09710 PF02629 CoA binding domain LLCC_RS09710 PF06971 Putative DNA-binding protein N-terminus LLCC_RS09730 PF05257 CHAP domain LLCC_RS09730 PF01476 LysM domain LLCC_RS09855 PF00692 dUTPase LLCC_RS09895 PF01555 DNA methylase LLCC_RS09895 PF18755 Restriction Enzyme Adenine Methylase Associated LLCC_RS09960 PF02899 Phage integrase, N-terminal SAM-like domain LLCC_RS09960 PF00589 Phage integrase family LLCC_RS09965 PF04002 RadC-like JAB domain LLCC_RS09970 PF01380 SIS domain LLCC_RS09975 PF01569 PAP2 superfamily LLCC_RS09980 PF18719 ArlS sensor domain LLCC_RS09980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLCC_RS09980 PF00512 His Kinase A (phospho-acceptor) domain LLCC_RS09990 PF00072 Response regulator receiver domain LLCC_RS09990 PF00486 Transcriptional regulatory protein, C terminal LLCC_RS09995 PF00535 Glycosyl transferase family 2 LLCC_RS10005 PF02681 Divergent PAP2 family LLCC_RS10010 PF01479 S4 domain LLCC_RS10010 PF00849 RNA pseudouridylate synthase LLCC_RS10015 PF01252 Signal peptidase (SPase) II LLCC_RS10040 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LLCC_RS10040 PF00925 GTP cyclohydrolase II LLCC_RS10045 PF00677 Lumazine binding domain LLCC_RS10060 PF03989 DNA gyrase C-terminal domain, beta-propeller LLCC_RS10060 PF00521 DNA gyrase/topoisomerase IV, subunit A LLCC_RS10065 PF13673 Acetyltransferase (GNAT) domain LLCC_RS10070 PF00929 Exonuclease LLCC_RS10070 PF11490 DNA polymerase III polC-type N-terminus II LLCC_RS10070 PF07733 Bacterial DNA polymerase III alpha NTPase domain LLCC_RS10070 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LLCC_RS10070 PF14579 Helix-hairpin-helix motif LLCC_RS10070 PF02811 PHP domain LLCC_RS10080 PF00986 DNA gyrase B subunit, carboxyl terminus LLCC_RS10080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLCC_RS10080 PF01751 Toprim domain LLCC_RS10080 PF00204 DNA gyrase B LLCC_RS10085 PF02660 Glycerol-3-phosphate acyltransferase LLCC_RS10090 PF00462 Glutaredoxin LLCC_RS10095 PF07972 NrdI Flavodoxin like LLCC_RS10100 PF08343 Ribonucleotide reductase N-terminal LLCC_RS10100 PF00317 Ribonucleotide reductase, all-alpha domain LLCC_RS10100 PF02867 Ribonucleotide reductase, barrel domain LLCC_RS10105 PF00268 Ribonucleotide reductase, small chain LLCC_RS10110 PF18075 FtsX extracellular domain LLCC_RS10110 PF02687 FtsX-like permease family LLCC_RS10115 PF00005 ABC transporter LLCC_RS10120 PF00472 RF-1 domain LLCC_RS10120 PF03462 PCRF domain LLCC_RS10130 PF04167 Protein of unknown function (DUF402) LLCC_RS10135 PF01226 Formate/nitrite transporter LLCC_RS10155 PF02650 WhiA C-terminal HTH domain LLCC_RS10155 PF14527 WhiA LAGLIDADG-like domain LLCC_RS10155 PF10298 WhiA N-terminal LAGLIDADG-like domain LLCC_RS10160 PF01933 Uncharacterised protein family UPF0052 LLCC_RS10165 PF03668 P-loop ATPase protein family LLCC_RS10170 PF13396 Phospholipase_D-nuclease N-terminal LLCC_RS10170 PF13091 PLD-like domain LLCC_RS10175 PF00027 Cyclic nucleotide-binding domain LLCC_RS10175 PF13545 Crp-like helix-turn-helix domain LLCC_RS10190 PF00403 Heavy-metal-associated domain LLCC_RS10225 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LLCC_RS10225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LLCC_RS10230 PF00294 pfkB family carbohydrate kinase LLCC_RS10235 PF00455 DeoR C terminal sensor domain LLCC_RS10235 PF08220 DeoR-like helix-turn-helix domain LLCC_RS10240 PF01546 Peptidase family M20/M25/M40 LLCC_RS10240 PF07687 Peptidase dimerisation domain LLCC_RS10245 PF06100 MCRA family LLCC_RS10255 PF00012 Hsp70 protein LLCC_RS10260 PF01025 GrpE LLCC_RS10265 PF01628 HrcA protein C terminal domain LLCC_RS10265 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LLCC_RS10275 PF02557 D-alanyl-D-alanine carboxypeptidase LLCC_RS10280 PF00300 Histidine phosphatase superfamily (branch 1) LLCC_RS10290 PF05167 Uncharacterised ACR (DUF711) LLCC_RS10310 PF00857 Isochorismatase family LLCC_RS10315 PF08206 Ribonuclease B OB domain LLCC_RS10315 PF00575 S1 RNA binding domain LLCC_RS10315 PF00773 RNB domain LLCC_RS10315 PF17876 Cold shock domain LLCC_RS10325 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLCC_RS10335 PF00005 ABC transporter LLCC_RS10340 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS10345 PF00497 Bacterial extracellular solute-binding proteins, family 3 LLCC_RS10350 PF00877 NlpC/P60 family LLCC_RS10355 PF01268 Formate--tetrahydrofolate ligase LLCC_RS10360 PF01906 Putative heavy-metal-binding LLCC_RS10375 PF01048 Phosphorylase superfamily LLCC_RS10385 PF01676 Metalloenzyme superfamily LLCC_RS10390 PF03816 Cell envelope-related transcriptional attenuator domain LLCC_RS10395 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LLCC_RS10470 PF13936 Helix-turn-helix domain LLCC_RS10475 PF08003 Protein of unknown function (DUF1698) LLCC_RS10485 PF00986 DNA gyrase B subunit, carboxyl terminus LLCC_RS10485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLCC_RS10485 PF01751 Toprim domain LLCC_RS10485 PF00204 DNA gyrase B LLCC_RS10490 PF08645 Polynucleotide kinase 3 phosphatase LLCC_RS10495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LLCC_RS10505 PF00005 ABC transporter LLCC_RS10515 PF03390 2-hydroxycarboxylate transporter family LLCC_RS10530 PF16326 ABC transporter C-terminal domain LLCC_RS10530 PF12848 ABC transporter LLCC_RS10530 PF00005 ABC transporter LLCC_RS10535 PF00106 short chain dehydrogenase LLCC_RS10545 PF01098 Cell cycle protein LLCC_RS10555 PF00575 S1 RNA binding domain LLCC_RS10565 PF00072 Response regulator receiver domain LLCC_RS10565 PF00196 Bacterial regulatory proteins, luxR family LLCC_RS10570 PF07730 Histidine kinase LLCC_RS10570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLCC_RS10635 PF00872 Transposase, Mutator family LLCC_RS10645 PF00872 Transposase, Mutator family LLCC_RS10670 PF02899 Phage integrase, N-terminal SAM-like domain LLCC_RS10670 PF00589 Phage integrase family LLCC_RS10675 PF01883 Iron-sulfur cluster assembly protein LLCC_RS10700 PF00216 Bacterial DNA-binding protein LLCC_RS10705 PF00582 Universal stress protein family LLCC_RS10725 PF00535 Glycosyl transferase family 2 LLCC_RS10740 PF13474 SnoaL-like domain LLCC_RS10745 PF01245 Ribosomal protein L19 LLCC_RS10750 PF04607 Region found in RelA / SpoT proteins LLCC_RS10765 PF03466 LysR substrate binding domain LLCC_RS10765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LLCC_RS10770 PF00005 ABC transporter LLCC_RS10775 PF02687 FtsX-like permease family LLCC_RS10775 PF12704 MacB-like periplasmic core domain LLCC_RS10785 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LLCC_RS10785 PF00953 Glycosyl transferase family 4 LLCC_RS10790 PF00905 Penicillin binding protein transpeptidase domain LLCC_RS10790 PF03717 Penicillin-binding Protein dimerisation domain LLCC_RS10790 PF03793 PASTA domain LLCC_RS10800 PF01795 MraW methylase family LLCC_RS10815 PF06736 Protein of unknown function (DUF1211) LLCC_RS10825 PF13476 AAA domain LLCC_RS10830 PF01316 Arginine repressor, DNA binding domain LLCC_RS10830 PF02863 Arginine repressor, C-terminal domain LLCC_RS10835 PF01728 FtsJ-like methyltransferase LLCC_RS10835 PF01479 S4 domain LLCC_RS10845 PF00348 Polyprenyl synthetase LLCC_RS10850 PF02595 Glycerate kinase family LLCC_RS10860 PF02609 Exonuclease VII small subunit LLCC_RS10865 PF02601 Exonuclease VII, large subunit LLCC_RS10865 PF13742 OB-fold nucleic acid binding domain LLCC_RS10870 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LLCC_RS10870 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LLCC_RS10905 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS10910 PF00571 CBS domain LLCC_RS10910 PF00005 ABC transporter LLCC_RS10915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LLCC_RS10915 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLCC_RS10920 PF03960 ArsC family LLCC_RS10925 PF01168 Alanine racemase, N-terminal domain LLCC_RS10925 PF00842 Alanine racemase, C-terminal domain LLCC_RS10930 PF01648 4'-phosphopantetheinyl transferase superfamily LLCC_RS10935 PF01546 Peptidase family M20/M25/M40 LLCC_RS10940 PF08759 Glycosyltransferase GT-D fold LLCC_RS10940 PF01501 Glycosyl transferase family 8 LLCC_RS10950 PF13610 DDE domain LLCC_RS10960 PF00534 Glycosyl transferases group 1 LLCC_RS10980 PF00872 Transposase, Mutator family LLCC_RS10985 PF14815 NUDIX domain LLCC_RS10985 PF00730 HhH-GPD superfamily base excision DNA repair protein LLCC_RS10990 PF01541 GIY-YIG catalytic domain LLCC_RS10990 PF08459 UvrC Helix-hairpin-helix N-terminal LLCC_RS10990 PF02151 UvrB/uvrC motif LLCC_RS10995 PF04973 Nicotinamide mononucleotide transporter LLCC_RS11000 PF01048 Phosphorylase superfamily LLCC_RS11005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LLCC_RS11005 PF18719 ArlS sensor domain LLCC_RS11005 PF00512 His Kinase A (phospho-acceptor) domain LLCC_RS11020 PF00575 S1 RNA binding domain LLCC_RS11040 PF00403 Heavy-metal-associated domain LLCC_RS11045 PF00403 Heavy-metal-associated domain LLCC_RS11050 PF03965 Penicillinase repressor LLCC_RS11055 PF03313 Serine dehydratase alpha chain LLCC_RS11060 PF01842 ACT domain LLCC_RS11060 PF03315 Serine dehydratase beta chain LLCC_RS11065 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LLCC_RS11065 PF04324 BFD-like [2Fe-2S] binding domain LLCC_RS11065 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LLCC_RS11065 PF18267 Rubredoxin NAD+ reductase C-terminal domain LLCC_RS11065 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLCC_RS11090 PF00561 alpha/beta hydrolase fold LLCC_RS11095 PF00232 Glycosyl hydrolase family 1 LLCC_RS11100 PF02378 Phosphotransferase system, EIIC LLCC_RS11105 PF01380 SIS domain LLCC_RS11105 PF01418 Helix-turn-helix domain, rpiR family LLCC_RS11110 PF13603 Leucyl-tRNA synthetase, Domain 2 LLCC_RS11110 PF08264 Anticodon-binding domain of tRNA LLCC_RS11110 PF09334 tRNA synthetases class I (M) LLCC_RS11110 PF00133 tRNA synthetases class I (I, L, M and V) LLCC_RS11120 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LLCC_RS11120 PF14572 Phosphoribosyl synthetase-associated domain LLCC_RS11125 PF00448 SRP54-type protein, GTPase domain LLCC_RS11125 PF02881 SRP54-type protein, helical bundle domain LLCC_RS11140 PF00324 Amino acid permease LLCC_RS11160 PF00884 Sulfatase LLCC_RS11165 PF06470 SMC proteins Flexible Hinge Domain LLCC_RS11165 PF02463 RecF/RecN/SMC N terminal domain LLCC_RS11170 PF00035 Double-stranded RNA binding motif LLCC_RS11170 PF14622 Ribonuclease-III-like LLCC_RS11185 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LLCC_RS11185 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LLCC_RS11200 PF13460 NAD(P)H-binding LLCC_RS11205 PF06177 QueT transporter LLCC_RS11225 PF08264 Anticodon-binding domain of tRNA LLCC_RS11225 PF01588 Putative tRNA binding domain LLCC_RS11225 PF09334 tRNA synthetases class I (M) LLCC_RS11230 PF03372 Endonuclease/Exonuclease/phosphatase family LLCC_RS11245 PF13610 DDE domain LLCC_RS11250 PF08220 DeoR-like helix-turn-helix domain LLCC_RS11250 PF00455 DeoR C terminal sensor domain LLCC_RS11255 PF03960 ArsC family LLCC_RS11260 PF02583 Metal-sensitive transcriptional repressor LLCC_RS11265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LLCC_RS11265 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLCC_RS11270 PF00581 Rhodanese-like domain LLCC_RS11275 PF00581 Rhodanese-like domain LLCC_RS11285 PF00291 Pyridoxal-phosphate dependent enzyme LLCC_RS11290 PF01053 Cys/Met metabolism PLP-dependent enzyme LLCC_RS11295 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LLCC_RS11300 PF17848 Acetyl-coA carboxylase zinc finger domain LLCC_RS11300 PF01039 Carboxyl transferase domain LLCC_RS11305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LLCC_RS11305 PF02785 Biotin carboxylase C-terminal domain LLCC_RS11305 PF00289 Biotin carboxylase, N-terminal domain LLCC_RS11310 PF07977 FabA-like domain LLCC_RS11315 PF00364 Biotin-requiring enzyme LLCC_RS11320 PF02801 Beta-ketoacyl synthase, C-terminal domain LLCC_RS11320 PF00109 Beta-ketoacyl synthase, N-terminal domain LLCC_RS11330 PF00698 Acyl transferase domain LLCC_RS11335 PF00550 Phosphopantetheine attachment site LLCC_RS11340 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LLCC_RS11340 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LLCC_RS11350 PF00872 Transposase, Mutator family LLCC_RS11355 PF01238 Phosphomannose isomerase type I LLCC_RS11360 PF02033 Ribosome-binding factor A LLCC_RS11365 PF04760 Translation initiation factor IF-2, N-terminal region LLCC_RS11365 PF11987 Translation-initiation factor 2 LLCC_RS11365 PF00009 Elongation factor Tu GTP binding domain LLCC_RS11370 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LLCC_RS11380 PF08529 NusA N-terminal domain LLCC_RS11380 PF13184 NusA-like KH domain LLCC_RS11380 PF00575 S1 RNA binding domain LLCC_RS11385 PF17384 RimP C-terminal SH3 domain LLCC_RS11385 PF02576 RimP N-terminal domain LLCC_RS11390 PF03788 LrgA family LLCC_RS11395 PF04172 LrgB-like family LLCC_RS11440 PF01926 50S ribosome-binding GTPase LLCC_RS11440 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LLCC_RS11450 PF00881 Nitroreductase family LLCC_RS11455 PF01695 IstB-like ATP binding protein LLCC_RS11455 PF07319 Primosomal protein DnaI N-terminus LLCC_RS11465 PF03477 ATP cone domain LLCC_RS11470 PF02390 Putative methyltransferase LLCC_RS11485 PF03796 DnaB-like helicase C terminal domain LLCC_RS11485 PF00772 DnaB-like helicase N terminal domain LLCC_RS11490 PF01281 Ribosomal protein L9, N-terminal domain LLCC_RS11490 PF03948 Ribosomal protein L9, C-terminal domain LLCC_RS11495 PF01368 DHH family LLCC_RS11495 PF02272 DHHA1 domain LLCC_RS11500 PF13419 Haloacid dehalogenase-like hydrolase LLCC_RS11515 PF13840 ACT domain LLCC_RS11515 PF00696 Amino acid kinase family LLCC_RS11520 PF15975 Flotillin LLCC_RS11520 PF01145 SPFH domain / Band 7 family LLCC_RS11535 PF00710 Asparaginase, N-terminal LLCC_RS11535 PF17763 Glutaminase/Asparaginase C-terminal domain LLCC_RS11545 PF01368 DHH family LLCC_RS11545 PF02272 DHHA1 domain LLCC_RS11550 PF03061 Thioesterase superfamily LLCC_RS11550 PF00571 CBS domain LLCC_RS11550 PF07085 DRTGG domain LLCC_RS11550 PF00392 Bacterial regulatory proteins, gntR family LLCC_RS11560 PF00425 chorismate binding enzyme LLCC_RS11565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LLCC_RS11565 PF16582 Middle domain of thiamine pyrophosphate LLCC_RS11565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LLCC_RS11570 PF00561 alpha/beta hydrolase fold LLCC_RS11575 PF00378 Enoyl-CoA hydratase/isomerase LLCC_RS11580 PF00501 AMP-binding enzyme LLCC_RS11580 PF13193 AMP-binding enzyme C-terminal domain LLCC_RS11585 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LLCC_RS11585 PF13378 Enolase C-terminal domain-like LLCC_RS11595 PF00356 Bacterial regulatory proteins, lacI family LLCC_RS11635 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS11650 PF14437 MafB19-like deaminase LLCC_RS11660 PF12706 Beta-lactamase superfamily domain LLCC_RS11665 PF00313 'Cold-shock' DNA-binding domain LLCC_RS11670 PF00313 'Cold-shock' DNA-binding domain LLCC_RS11705 PF00005 ABC transporter LLCC_RS11705 PF02687 FtsX-like permease family LLCC_RS11705 PF12704 MacB-like periplasmic core domain LLCC_RS11710 PF09335 SNARE associated Golgi protein LLCC_RS11715 PF06736 Protein of unknown function (DUF1211) LLCC_RS11735 PF01047 MarR family LLCC_RS11740 PF00005 ABC transporter LLCC_RS11740 PF00664 ABC transporter transmembrane region LLCC_RS11745 PF00664 ABC transporter transmembrane region LLCC_RS11745 PF00005 ABC transporter LLCC_RS11750 PF02322 Cytochrome bd terminal oxidase subunit II LLCC_RS11755 PF01654 Cytochrome bd terminal oxidase subunit I LLCC_RS11760 PF00854 POT family LLCC_RS11785 PF13610 DDE domain LLCC_RS11790 PF02446 4-alpha-glucanotransferase LLCC_RS11795 PF01029 NusB family LLCC_RS11800 PF03780 Asp23 family, cell envelope-related function LLCC_RS11805 PF08207 Elongation factor P (EF-P) KOW-like domain LLCC_RS11805 PF09285 Elongation factor P, C-terminal LLCC_RS11805 PF01132 Elongation factor P (EF-P) OB domain LLCC_RS11810 PF00557 Metallopeptidase family M24 LLCC_RS11810 PF01321 Creatinase/Prolidase N-terminal domain LLCC_RS11815 PF00398 Ribosomal RNA adenine dimethylase LLCC_RS11820 PF13662 Toprim domain LLCC_RS11820 PF13331 Domain of unknown function (DUF4093) LLCC_RS11830 PF01026 TatD related DNase LLCC_RS11835 PF06902 Divergent 4Fe-4S mono-cluster LLCC_RS11845 PF05525 Branched-chain amino acid transport protein LLCC_RS11880 PF03960 ArsC family LLCC_RS11890 PF00574 Clp protease LLCC_RS11895 PF00180 Isocitrate/isopropylmalate dehydrogenase LLCC_RS11910 PF02436 Conserved carboxylase domain LLCC_RS11910 PF00364 Biotin-requiring enzyme LLCC_RS11910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LLCC_RS11910 PF00289 Biotin carboxylase, N-terminal domain LLCC_RS11910 PF02785 Biotin carboxylase C-terminal domain LLCC_RS11910 PF00682 HMGL-like LLCC_RS11915 PF01098 Cell cycle protein LLCC_RS11920 PF00471 Ribosomal protein L33 LLCC_RS11925 PF07690 Major Facilitator Superfamily LLCC_RS11930 PF01121 Dephospho-CoA kinase LLCC_RS11935 PF02901 Pyruvate formate lyase-like LLCC_RS11935 PF01228 Glycine radical LLCC_RS11945 PF13193 AMP-binding enzyme C-terminal domain LLCC_RS11945 PF00501 AMP-binding enzyme LLCC_RS11955 PF02687 FtsX-like permease family LLCC_RS11960 PF00005 ABC transporter LLCC_RS11965 PF00113 Enolase, C-terminal TIM barrel domain LLCC_RS11965 PF03952 Enolase, N-terminal domain LLCC_RS11970 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LLCC_RS11970 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LLCC_RS11975 PF17871 AAA lid domain LLCC_RS11975 PF02861 Clp amino terminal domain, pathogenicity island component LLCC_RS11975 PF07724 AAA domain (Cdc48 subfamily) LLCC_RS11975 PF00004 ATPase family associated with various cellular activities (AAA) LLCC_RS11975 PF10431 C-terminal, D2-small domain, of ClpB protein LLCC_RS11980 PF05848 CtsR N-terminal HTH domain LLCC_RS11980 PF17727 CtsR C-terminal dimerization domain LLCC_RS11995 PF03449 Transcription elongation factor, N-terminal LLCC_RS11995 PF01272 Transcription elongation factor, GreA/GreB, C-term LLCC_RS12000 PF02618 YceG-like family LLCC_RS12005 PF05066 HB1, ASXL, restriction endonuclease HTH domain LLCC_RS12010 PF00156 Phosphoribosyl transferase domain LLCC_RS12015 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LLCC_RS12015 PF01368 DHH family LLCC_RS12015 PF17768 RecJ OB domain LLCC_RS12015 PF02272 DHHA1 domain LLCC_RS12020 PF00106 short chain dehydrogenase LLCC_RS12025 PF12706 Beta-lactamase superfamily domain LLCC_RS12025 PF00753 Metallo-beta-lactamase superfamily LLCC_RS12035 PF00872 Transposase, Mutator family LLCC_RS12080 PF02705 K+ potassium transporter LLCC_RS12085 PF02705 K+ potassium transporter LLCC_RS12090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LLCC_RS12090 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LLCC_RS12095 PF12732 YtxH-like protein LLCC_RS12105 PF01790 Prolipoprotein diacylglyceryl transferase LLCC_RS12110 PF02603 HPr Serine kinase N terminus LLCC_RS12110 PF07475 HPr Serine kinase C-terminal domain LLCC_RS12130 PF04138 GtrA-like protein LLCC_RS12140 PF00557 Metallopeptidase family M24 LLCC_RS12155 PF13610 DDE domain LLCC_RS12165 PF00258 Flavodoxin LLCC_RS12175 PF13411 MerR HTH family regulatory protein LLCC_RS12190 PF08032 RNA 2'-O ribose methyltransferase substrate binding LLCC_RS12190 PF00588 SpoU rRNA Methylase family LLCC_RS12195 PF00708 Acylphosphatase LLCC_RS12205 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LLCC_RS12205 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LLCC_RS12205 PF01842 ACT domain LLCC_RS12210 PF00266 Aminotransferase class-V LLCC_RS12220 PF00464 Serine hydroxymethyltransferase LLCC_RS12225 PF03481 Putative GTP-binding controlling metal-binding LLCC_RS12225 PF01300 Telomere recombination LLCC_RS12235 PF17827 PrmC N-terminal domain LLCC_RS12235 PF05175 Methyltransferase small domain LLCC_RS12240 PF00881 Nitroreductase family LLCC_RS12250 PF00472 RF-1 domain LLCC_RS12250 PF03462 PCRF domain LLCC_RS12260 PF00265 Thymidine kinase LLCC_RS12275 PF02486 Replication initiation factor LLCC_RS12295 PF13673 Acetyltransferase (GNAT) domain LLCC_RS12305 PF01361 Tautomerase enzyme LLCC_RS12310 PF04127 DNA / pantothenate metabolism flavoprotein LLCC_RS12310 PF02441 Flavoprotein LLCC_RS12315 PF02441 Flavoprotein LLCC_RS12320 PF12822 ECF transporter, substrate-specific component LLCC_RS12330 PF02096 60Kd inner membrane protein LLCC_RS12340 PF07977 FabA-like domain LLCC_RS12350 PF00497 Bacterial extracellular solute-binding proteins, family 3 LLCC_RS12355 PF00271 Helicase conserved C-terminal domain LLCC_RS12355 PF04851 Type III restriction enzyme, res subunit LLCC_RS12355 PF02151 UvrB/uvrC motif LLCC_RS12355 PF12344 Ultra-violet resistance protein B LLCC_RS12355 PF17757 UvrB interaction domain LLCC_RS12360 PF00293 NUDIX domain LLCC_RS12365 PF01327 Polypeptide deformylase LLCC_RS12370 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LLCC_RS12370 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LLCC_RS12375 PF02082 Transcriptional regulator LLCC_RS12380 PF07724 AAA domain (Cdc48 subfamily) LLCC_RS12380 PF17871 AAA lid domain LLCC_RS12380 PF10431 C-terminal, D2-small domain, of ClpB protein LLCC_RS12380 PF00004 ATPase family associated with various cellular activities (AAA) LLCC_RS12410 PF07690 Major Facilitator Superfamily LLCC_RS12465 PF16925 Tetracyclin repressor-like, C-terminal domain LLCC_RS12465 PF00440 Bacterial regulatory proteins, tetR family LLCC_RS12475 PF00857 Isochorismatase family LLCC_RS12480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LLCC_RS12480 PF07992 Pyridine nucleotide-disulphide oxidoreductase LLCC_RS12520 PF00313 'Cold-shock' DNA-binding domain LLCC_RS12525 PF13610 DDE domain LLCC_RS12545 PF00117 Glutamine amidotransferase class-I LLCC_RS12550 PF00425 chorismate binding enzyme LLCC_RS12550 PF04715 Anthranilate synthase component I, N terminal region LLCC_RS12560 PF00583 Acetyltransferase (GNAT) family LLCC_RS12580 PF01695 IstB-like ATP binding protein LLCC_RS12585 PF00665 Integrase core domain LLCC_RS12585 PF02796 Helix-turn-helix domain of resolvase LLCC_RS12595 PF13614 AAA domain LLCC_RS12600 PF02796 Helix-turn-helix domain of resolvase LLCC_RS12600 PF00239 Resolvase, N terminal domain LLCC_RS12610 PF00817 impB/mucB/samB family LLCC_RS12610 PF11799 impB/mucB/samB family C-terminal domain LLCC_RS12610 PF11798 IMS family HHH motif LLCC_RS12630 PF03412 Peptidase C39 family LLCC_RS12630 PF00005 ABC transporter LLCC_RS12630 PF00664 ABC transporter transmembrane region LLCC_RS12640 PF04369 Lactococcin-like family LLCC_RS12645 PF08951 Enterocin A Immunity LLCC_RS12650 PF04369 Lactococcin-like family LLCC_RS12675 PF02517 CPBP intramembrane metalloprotease LLCC_RS12720 PF04369 Lactococcin-like family LLCC_RS12740 PF00239 Resolvase, N terminal domain LLCC_RS12740 PF02796 Helix-turn-helix domain of resolvase LLCC_RS12760 PF05257 CHAP domain LLCC_RS12760 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LLCC_RS12770 PF13610 DDE domain LLCC_RS12790 PF13610 DDE domain LLCC_RS12795 PF02517 CPBP intramembrane metalloprotease LLCC_RS12805 PF02796 Helix-turn-helix domain of resolvase LLCC_RS12805 PF00239 Resolvase, N terminal domain LLCC_RS12825 PF03432 Relaxase/Mobilisation nuclease domain LLCC_RS12865 PF13614 AAA domain LLCC_RS12880 PF11798 IMS family HHH motif LLCC_RS12880 PF11799 impB/mucB/samB family C-terminal domain LLCC_RS12880 PF00817 impB/mucB/samB family LLCC_RS12900 PF13610 DDE domain LLCC_RS12920 PF00313 'Cold-shock' DNA-binding domain LLCC_RS12925 PF00313 'Cold-shock' DNA-binding domain LLCC_RS12945 PF00239 Resolvase, N terminal domain LLCC_RS12945 PF02796 Helix-turn-helix domain of resolvase LLCC_RS12950 PF06616 BsuBI/PstI restriction endonuclease domain LLCC_RS12950 PF17728 BsuBI/PstI restriction endonuclease HTH domain LLCC_RS12955 PF07669 Eco57I restriction-modification methylase LLCC_RS12965 PF13166 AAA domain LLCC_RS12995 PF07669 Eco57I restriction-modification methylase LLCC_RS13045 PF02796 Helix-turn-helix domain of resolvase LLCC_RS13045 PF00665 Integrase core domain LLCC_RS13050 PF01695 IstB-like ATP binding protein LLCC_RS13185 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LLCC_RS13185 PF05257 CHAP domain LLCC_RS13205 PF01432 Peptidase family M3 LLCC_RS13205 PF08439 Oligopeptidase F LLCC_RS13225 PF02796 Helix-turn-helix domain of resolvase LLCC_RS13225 PF00239 Resolvase, N terminal domain LLCC_RS13235 PF00455 DeoR C terminal sensor domain LLCC_RS13235 PF08220 DeoR-like helix-turn-helix domain LLCC_RS13240 PF02502 Ribose/Galactose Isomerase LLCC_RS13245 PF02502 Ribose/Galactose Isomerase LLCC_RS13250 PF00294 pfkB family carbohydrate kinase LLCC_RS13255 PF01791 DeoC/LacD family aldolase LLCC_RS13260 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LLCC_RS13265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LLCC_RS13265 PF02378 Phosphotransferase system, EIIC LLCC_RS13270 PF00232 Glycosyl hydrolase family 1 LLCC_RS13280 PF01263 Aldose 1-epimerase LLCC_RS13310 PF02522 Aminoglycoside 3-N-acetyltransferase LLCC_RS13325 PF13610 DDE domain LLCC_RS13335 PF01566 Natural resistance-associated macrophage protein LLCC_RS13345 PF13610 DDE domain LLCC_RS13380 PF01051 Initiator Replication protein LLCC_RS13405 PF01051 Initiator Replication protein LLCC_RS13415 PF00005 ABC transporter LLCC_RS13415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LLCC_RS13420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LLCC_RS13420 PF00005 ABC transporter LLCC_RS13425 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS13430 PF00528 Binding-protein-dependent transport system inner membrane component LLCC_RS13435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LLCC_RS13440 PF05649 Peptidase family M13 LLCC_RS13440 PF01431 Peptidase family M13 LLCC_RS13445 PF00533 BRCA1 C Terminus (BRCT) domain LLCC_RS13445 PF01653 NAD-dependent DNA ligase adenylation domain LLCC_RS13445 PF03120 NAD-dependent DNA ligase OB-fold domain LLCC_RS13445 PF12826 Helix-hairpin-helix motif LLCC_RS13445 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LLCC_RS13455 PF02796 Helix-turn-helix domain of resolvase LLCC_RS13455 PF00239 Resolvase, N terminal domain LLCC_RS13485 PF02839 Carbohydrate binding domain LLCC_RS13500 PF01546 Peptidase family M20/M25/M40 LLCC_RS13500 PF07687 Peptidase dimerisation domain LLCC_RS13515 PF13610 DDE domain LLCC_RS13540 PF03432 Relaxase/Mobilisation nuclease domain LLCC_RS13555 PF01051 Initiator Replication protein LLCC_RS13565 PF07690 Major Facilitator Superfamily LLCC_RS13580 PF02517 CPBP intramembrane metalloprotease LLCC_RS13590 PF01381 Helix-turn-helix LLCC_RS13610 PF13610 DDE domain LLCC_RS13630 PF01565 FAD binding domain LLCC_RS13630 PF09330 D-lactate dehydrogenase, membrane binding LLCC_RS13645 PF00082 Subtilase family LLCC_RS13645 PF06280 Fn3-like domain LLCC_RS13645 PF00746 LPXTG cell wall anchor motif LLCC_RS13645 PF02225 PA domain LLCC_RS13650 PF00639 PPIC-type PPIASE domain LLCC_RS13690 PF01195 Peptidyl-tRNA hydrolase LLCC_RS13720 PF00528 Binding-protein-dependent transport system inner membrane component