CV098_RS00005	SM00382	ATPases associated with a variety of cellular activities
CV098_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CV098_RS00010	SM00480	DNA polymerase III beta subunit
CV098_RS00030	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS00040	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS00055	SM00382	ATPases associated with a variety of cellular activities
CV098_RS00065	SM00487	DEAD-like helicases superfamily
CV098_RS00065	SM00490	helicase superfamily c-terminal domain
CV098_RS00065	SM00982	CV098_RS00065
CV098_RS00065	SM01058	CarD-like/TRCF domain
CV098_RS00075	SM00363	S4 RNA-binding domain
CV098_RS00095	SM00977	TilS substrate C-terminal domain
CV098_RS00105	SM00382	ATPases associated with a variety of cellular activities
CV098_RS00225	SM00861	Transketolase, pyrimidine binding domain
CV098_RS00245	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CV098_RS00280	SM00382	ATPases associated with a variety of cellular activities
CV098_RS00320	SM00903	Flavin reductase like domain
CV098_RS00350	SM00470	ParB-like nuclease domain
CV098_RS00355	SM00382	ATPases associated with a variety of cellular activities
CV098_RS00370	SM00382	ATPases associated with a variety of cellular activities
CV098_RS00400	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CV098_RS00400	SM00954	Region found in RelA / SpoT proteins
CV098_RS00430	SM00563	Phosphate acyltransferases
CV098_RS00435	SM00347	helix_turn_helix multiple antibiotic resistance protein
CV098_RS00445	SM00957	SecA DEAD-like domain
CV098_RS00445	SM00958	SecA preprotein cross-linking domain
CV098_RS00530	SM00393	Putative single-stranded nucleic acids-binding domain
CV098_RS00530	SM01245	CV098_RS00530
CV098_RS00550	SM00732	Likely ribonuclease with RNase H fold.
CV098_RS00585	SM00642	Alpha-amylase domain
CV098_RS00695	SM00881	CoA binding domain
CV098_RS00700	SM00892	DNA/RNA non-specific endonuclease
CV098_RS00740	SM00845	GatB domain
CV098_RS00755	SM00357	Cold shock protein domain
CV098_RS00855	SM00899	CV098_RS00855
CV098_RS00865	SM01120	CV098_RS00865
CV098_RS00865	SM01121	CV098_RS00865
CV098_RS00935	SM00382	ATPases associated with a variety of cellular activities
CV098_RS01020	SM00116	Domain in cystathionine beta-synthase and other proteins.
CV098_RS01020	SM01240	CV098_RS01020
CV098_RS01040	SM01103	CV098_RS01040
CV098_RS01050	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CV098_RS01090	SM00986	Uracil DNA glycosylase superfamily
CV098_RS01090	SM00987	UreE urease accessory protein, C-terminal domain 
CV098_RS01095	SM00829	Enoylreductase
CV098_RS01145	SM01120	CV098_RS01145
CV098_RS01170	SM00382	ATPases associated with a variety of cellular activities
CV098_RS01210	SM00382	ATPases associated with a variety of cellular activities
CV098_RS01215	SM00382	ATPases associated with a variety of cellular activities
CV098_RS01260	SM00047	Lysozyme subfamily 2
CV098_RS01260	SM00257	Lysin motif
CV098_RS01280	SM01192	CV098_RS01280
CV098_RS01280	SM01193	CV098_RS01280
CV098_RS01290	SM00382	ATPases associated with a variety of cellular activities
CV098_RS01300	SM00382	ATPases associated with a variety of cellular activities
CV098_RS01340	SM00363	S4 RNA-binding domain
CV098_RS01340	SM01390	CV098_RS01340
CV098_RS01345	SM00316	Ribosomal protein S1-like RNA-binding domain
CV098_RS01345	SM00732	Likely ribonuclease with RNase H fold.
CV098_RS01350	SM00731	SprT homologues.
CV098_RS01365	SM00849	Metallo-beta-lactamase superfamily
CV098_RS01415	SM00382	ATPases associated with a variety of cellular activities
CV098_RS01450	SM00347	helix_turn_helix multiple antibiotic resistance protein
CV098_RS01470	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS01475	SM00382	ATPases associated with a variety of cellular activities
CV098_RS01480	SM00382	ATPases associated with a variety of cellular activities
CV098_RS01535	SM00382	ATPases associated with a variety of cellular activities
CV098_RS01535	SM00930	CV098_RS01535
CV098_RS01550	SM00382	ATPases associated with a variety of cellular activities
CV098_RS01560	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS01565	SM00382	ATPases associated with a variety of cellular activities
CV098_RS01610	SM00855	Phosphoglycerate mutase family
CV098_RS01630	SM00493	CV098_RS01630
CV098_RS01665	SM00382	ATPases associated with a variety of cellular activities
CV098_RS01670	SM00382	ATPases associated with a variety of cellular activities
CV098_RS01680	SM00487	DEAD-like helicases superfamily
CV098_RS01680	SM00490	helicase superfamily c-terminal domain
CV098_RS01695	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CV098_RS01695	SM01232	CV098_RS01695
CV098_RS01700	SM00382	ATPases associated with a variety of cellular activities
CV098_RS01730	SM01118	CV098_RS01730
CV098_RS01740	SM00954	Region found in RelA / SpoT proteins
CV098_RS01805	SM00981	CV098_RS01805
CV098_RS01835	SM00363	S4 RNA-binding domain
CV098_RS01875	SM00883	Chaperonin 10 Kd subunit
CV098_RS01885	SM00849	Metallo-beta-lactamase superfamily
CV098_RS01890	SM00091	PAS domain
CV098_RS01890	SM00387	Histidine kinase-like ATPases
CV098_RS01890	SM00388	His Kinase A (phosphoacceptor) domain
CV098_RS01895	SM00448	cheY-homologous receiver domain
CV098_RS01895	SM00862	Transcriptional regulatory protein, C terminal
CV098_RS01960	SM00487	DEAD-like helicases superfamily
CV098_RS01960	SM00490	helicase superfamily c-terminal domain
CV098_RS02010	SM00292	breast cancer carboxy-terminal domain
CV098_RS02010	SM00532	Ligase N family
CV098_RS02015	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CV098_RS02020	SM00382	ATPases associated with a variety of cellular activities
CV098_RS02025	SM00890	Domain of unknown function
CV098_RS02045	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CV098_RS02045	SM00866	CV098_RS02045
CV098_RS02165	SM00481	DNA polymerase alpha chain like domain
CV098_RS02195	SM00411	bacterial (prokaryotic) histone like domain
CV098_RS02210	SM00342	helix_turn_helix, arabinose operon control protein
CV098_RS02215	SM00382	ATPases associated with a variety of cellular activities
CV098_RS02225	SM00850	LytTr DNA-binding domain
CV098_RS02255	SM00047	Lysozyme subfamily 2
CV098_RS02255	SM00257	Lysin motif
CV098_RS02260	SM00849	Metallo-beta-lactamase superfamily
CV098_RS02400	SM00400	zinc finger
CV098_RS02400	SM00493	CV098_RS02400
CV098_RS02425	SM00382	ATPases associated with a variety of cellular activities
CV098_RS02425	SM01086	C-terminal, D2-small domain, of ClpB protein
CV098_RS02435	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CV098_RS02450	SM00487	DEAD-like helicases superfamily
CV098_RS02450	SM00490	helicase superfamily c-terminal domain
CV098_RS02455	SM00062	Bacterial periplasmic substrate-binding proteins
CV098_RS02535	SM01120	CV098_RS02535
CV098_RS02535	SM01121	CV098_RS02535
CV098_RS02595	SM00347	helix_turn_helix multiple antibiotic resistance protein
CV098_RS02615	SM00937	CV098_RS02615
CV098_RS02675	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CV098_RS02745	SM01350	CV098_RS02745
CV098_RS02780	SM00244	prohibitin homologues
CV098_RS02840	SM00382	ATPases associated with a variety of cellular activities
CV098_RS02840	SM01086	C-terminal, D2-small domain, of ClpB protein
CV098_RS02850	SM01192	CV098_RS02850
CV098_RS02850	SM01193	CV098_RS02850
CV098_RS02855	SM00382	ATPases associated with a variety of cellular activities
CV098_RS02905	SM00878	Biotin carboxylase C-terminal domain
CV098_RS02920	SM01329	CV098_RS02920
CV098_RS02945	SM00831	Cation transporter/ATPase, N-terminus
CV098_RS03005	SM00382	ATPases associated with a variety of cellular activities
CV098_RS03010	SM01260	CV098_RS03010
CV098_RS03025	SM00448	cheY-homologous receiver domain
CV098_RS03025	SM00862	Transcriptional regulatory protein, C terminal
CV098_RS03030	SM00387	Histidine kinase-like ATPases
CV098_RS03030	SM00388	His Kinase A (phosphoacceptor) domain
CV098_RS03035	SM00382	ATPases associated with a variety of cellular activities
CV098_RS03050	SM00052	Putative diguanylate phosphodiesterase
CV098_RS03055	SM00267	diguanylate cyclase
CV098_RS03065	SM00354	helix_turn _helix lactose operon repressor
CV098_RS03070	SM00640	Glycosyl hydrolases family 32
CV098_RS03125	SM00857	Resolvase, N terminal domain
CV098_RS03135	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS03165	SM00357	Cold shock protein domain
CV098_RS03170	SM00357	Cold shock protein domain
CV098_RS03175	SM00354	helix_turn _helix lactose operon repressor
CV098_RS03195	SM00642	Alpha-amylase domain
CV098_RS03235	SM00493	CV098_RS03235
CV098_RS03240	SM00650	Ribosomal RNA adenine dimethylases
CV098_RS03250	SM00841	Elongation factor P, C-terminal
CV098_RS03250	SM01185	CV098_RS03250
CV098_RS03290	SM00642	Alpha-amylase domain
CV098_RS03310	SM00382	ATPases associated with a variety of cellular activities
CV098_RS03315	SM00382	ATPases associated with a variety of cellular activities
CV098_RS03320	SM00347	helix_turn_helix multiple antibiotic resistance protein
CV098_RS03335	SM00382	ATPases associated with a variety of cellular activities
CV098_RS03350	SM00382	ATPases associated with a variety of cellular activities
CV098_RS03365	SM00829	Enoylreductase
CV098_RS03375	SM00849	Metallo-beta-lactamase superfamily
CV098_RS03410	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CV098_RS03445	SM00116	Domain in cystathionine beta-synthase and other proteins.
CV098_RS03455	SM00870	CV098_RS03455
CV098_RS03470	SM00244	prohibitin homologues
CV098_RS03485	SM00347	helix_turn_helix multiple antibiotic resistance protein
CV098_RS03600	SM00316	Ribosomal protein S1-like RNA-binding domain
CV098_RS03630	SM00347	helix_turn_helix multiple antibiotic resistance protein
CV098_RS03645	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CV098_RS03650	SM00822	CV098_RS03650
CV098_RS03655	SM00825	Beta-ketoacyl synthase
CV098_RS03675	SM00878	Biotin carboxylase C-terminal domain
CV098_RS03705	SM00450	Rhodanese Homology Domain
CV098_RS03710	SM00450	Rhodanese Homology Domain
CV098_RS03715	SM00450	Rhodanese Homology Domain
CV098_RS03730	SM00420	helix_turn_helix, Deoxyribose operon repressor
CV098_RS03730	SM01134	CV098_RS03730
CV098_RS03775	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CV098_RS03800	SM00358	Double-stranded RNA binding motif
CV098_RS03800	SM00535	Ribonuclease III family
CV098_RS03805	SM00968	SMC proteins Flexible Hinge Domain
CV098_RS03845	SM00382	ATPases associated with a variety of cellular activities
CV098_RS03845	SM00962	SRP54-type protein, GTPase domain
CV098_RS03845	SM00963	SRP54-type protein, helical bundle domain
CV098_RS03850	SM01400	CV098_RS03850
CV098_RS03940	SM00316	Ribosomal protein S1-like RNA-binding domain
CV098_RS03955	SM00465	GIY-YIG type nucleases (URI domain)
CV098_RS03960	SM00478	endonuclease III
CV098_RS03960	SM00525	CV098_RS03960
CV098_RS03975	SM01005	Alanine racemase, C-terminal domain
CV098_RS03990	SM00382	ATPases associated with a variety of cellular activities
CV098_RS04095	SM00740	CV098_RS04095
CV098_RS04115	SM00382	ATPases associated with a variety of cellular activities
CV098_RS04125	SM00954	Region found in RelA / SpoT proteins
CV098_RS04160	SM00411	bacterial (prokaryotic) histone like domain
CV098_RS04180	SM00382	ATPases associated with a variety of cellular activities
CV098_RS04245	SM00387	Histidine kinase-like ATPases
CV098_RS04250	SM00421	helix_turn_helix, Lux Regulon
CV098_RS04250	SM00448	cheY-homologous receiver domain
CV098_RS04265	SM00316	Ribosomal protein S1-like RNA-binding domain
CV098_RS04280	SM00829	Enoylreductase
CV098_RS04295	SM00919	Malic enzyme, NAD binding domain
CV098_RS04295	SM01274	CV098_RS04295
CV098_RS04320	SM00387	Histidine kinase-like ATPases
CV098_RS04320	SM00433	TopoisomeraseII
CV098_RS04340	SM00347	helix_turn_helix multiple antibiotic resistance protein
CV098_RS04395	SM00062	Bacterial periplasmic substrate-binding proteins
CV098_RS04405	SM00382	ATPases associated with a variety of cellular activities
CV098_RS04425	SM00316	Ribosomal protein S1-like RNA-binding domain
CV098_RS04425	SM00955	CV098_RS04425
CV098_RS04460	SM00855	Phosphoglycerate mutase family
CV098_RS04500	SM00420	helix_turn_helix, Deoxyribose operon repressor
CV098_RS04500	SM01134	CV098_RS04500
CV098_RS04515	SM00155	Phospholipase D. Active site motifs.
CV098_RS04540	SM00382	ATPases associated with a variety of cellular activities
CV098_RS04570	SM00937	CV098_RS04570
CV098_RS04575	SM00382	ATPases associated with a variety of cellular activities
CV098_RS04605	SM01207	CV098_RS04605
CV098_RS04610	SM00387	Histidine kinase-like ATPases
CV098_RS04610	SM00433	TopoisomeraseII
CV098_RS04620	SM00479	CV098_RS04620
CV098_RS04630	SM00434	DNA Topoisomerase IV
CV098_RS04665	SM00363	S4 RNA-binding domain
CV098_RS04685	SM00448	cheY-homologous receiver domain
CV098_RS04685	SM00862	Transcriptional regulatory protein, C terminal
CV098_RS04695	SM00387	Histidine kinase-like ATPases
CV098_RS04695	SM00388	His Kinase A (phosphoacceptor) domain
CV098_RS04700	SM00014	Acid phosphatase homologues
CV098_RS04715	SM00881	CoA binding domain
CV098_RS04725	SM00382	ATPases associated with a variety of cellular activities
CV098_RS04730	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS04770	SM00478	endonuclease III
CV098_RS04770	SM00525	CV098_RS04770
CV098_RS04795	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CV098_RS04860	SM00487	DEAD-like helicases superfamily
CV098_RS04860	SM00490	helicase superfamily c-terminal domain
CV098_RS04930	SM00382	ATPases associated with a variety of cellular activities
CV098_RS04955	SM00838	Elongation factor G C-terminus
CV098_RS04970	SM00434	DNA Topoisomerase IV
CV098_RS05040	SM00904	Riboflavin kinase
CV098_RS05090	SM00470	ParB-like nuclease domain
CV098_RS05095	SM00729	Elongator protein 3, MiaB family, Radical SAM
CV098_RS05125	SM01240	CV098_RS05125
CV098_RS05160	SM00382	ATPases associated with a variety of cellular activities
CV098_RS05160	SM00994	ClpX C4-type zinc finger
CV098_RS05160	SM01086	C-terminal, D2-small domain, of ClpB protein
CV098_RS05170	SM00905	Dihydroneopterin aldolase
CV098_RS05220	SM00382	ATPases associated with a variety of cellular activities
CV098_RS05270	SM00357	Cold shock protein domain
CV098_RS05275	SM00155	Phospholipase D. Active site motifs.
CV098_RS05315	SM00028	Tetratricopeptide repeats
CV098_RS05335	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CV098_RS05340	SM00421	helix_turn_helix, Lux Regulon
CV098_RS05340	SM00448	cheY-homologous receiver domain
CV098_RS05345	SM00823	Phosphopantetheine attachment site
CV098_RS05350	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CV098_RS05355	SM00822	CV098_RS05355
CV098_RS05355	SM00825	Beta-ketoacyl synthase
CV098_RS05360	SM00822	CV098_RS05360
CV098_RS05360	SM00823	Phosphopantetheine attachment site
CV098_RS05360	SM00825	Beta-ketoacyl synthase
CV098_RS05360	SM00826	CV098_RS05360
CV098_RS05360	SM01294	CV098_RS05360
CV098_RS05365	SM00382	ATPases associated with a variety of cellular activities
CV098_RS05375	SM00823	Phosphopantetheine attachment site
CV098_RS05375	SM00825	Beta-ketoacyl synthase
CV098_RS05465	SM00387	Histidine kinase-like ATPases
CV098_RS05465	SM00388	His Kinase A (phosphoacceptor) domain
CV098_RS05470	SM00448	cheY-homologous receiver domain
CV098_RS05470	SM00862	Transcriptional regulatory protein, C terminal
CV098_RS05495	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS05510	SM00316	Ribosomal protein S1-like RNA-binding domain
CV098_RS05510	SM00357	Cold shock protein domain
CV098_RS05510	SM00955	CV098_RS05510
CV098_RS05570	SM00481	DNA polymerase alpha chain like domain
CV098_RS05575	SM00450	Rhodanese Homology Domain
CV098_RS05580	SM00917	LeuA allosteric (dimerisation) domain
CV098_RS05585	SM01329	CV098_RS05585
CV098_RS05605	SM00382	ATPases associated with a variety of cellular activities
CV098_RS05650	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CV098_RS05650	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CV098_RS05650	SM00493	CV098_RS05650
CV098_RS05700	SM00728	Clostridial hydrophobic, with a conserved W residue, domain.
CV098_RS05710	SM00728	Clostridial hydrophobic, with a conserved W residue, domain.
CV098_RS05725	SM00382	ATPases associated with a variety of cellular activities
CV098_RS05730	SM00347	helix_turn_helix multiple antibiotic resistance protein
CV098_RS05740	SM00382	ATPases associated with a variety of cellular activities
CV098_RS05745	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CV098_RS05805	SM00642	Alpha-amylase domain
CV098_RS05830	SM00529	Helix-turn-helix diphteria tox regulatory element
CV098_RS05835	SM00831	Cation transporter/ATPase, N-terminus
CV098_RS05910	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS05915	SM00382	ATPases associated with a variety of cellular activities
CV098_RS05920	SM00382	ATPases associated with a variety of cellular activities
CV098_RS05930	SM00363	S4 RNA-binding domain
CV098_RS05950	SM00116	Domain in cystathionine beta-synthase and other proteins.
CV098_RS05990	SM01266	CV098_RS05990
CV098_RS06015	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS06040	SM00420	helix_turn_helix, Deoxyribose operon repressor
CV098_RS06040	SM01134	CV098_RS06040
CV098_RS06070	SM00855	Phosphoglycerate mutase family
CV098_RS06105	SM00347	helix_turn_helix multiple antibiotic resistance protein
CV098_RS06160	SM00382	ATPases associated with a variety of cellular activities
CV098_RS06215	SM00382	ATPases associated with a variety of cellular activities
CV098_RS06300	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CV098_RS06320	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CV098_RS06320	SM00866	CV098_RS06320
CV098_RS06380	SM00851	MGS-like domain
CV098_RS06380	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CV098_RS06390	SM00047	Lysozyme subfamily 2
CV098_RS06395	SM00831	Cation transporter/ATPase, N-terminus
CV098_RS06435	SM00226	Low molecular weight phosphatase family
CV098_RS06465	SM00728	Clostridial hydrophobic, with a conserved W residue, domain.
CV098_RS06585	SM00507	HNH nucleases
CV098_RS06690	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS06715	SM00448	cheY-homologous receiver domain
CV098_RS06715	SM00862	Transcriptional regulatory protein, C terminal
CV098_RS06720	SM00387	Histidine kinase-like ATPases
CV098_RS06720	SM00388	His Kinase A (phosphoacceptor) domain
CV098_RS06730	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CV098_RS06730	SM00866	CV098_RS06730
CV098_RS06745	SM01133	CV098_RS06745
CV098_RS06755	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CV098_RS06780	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS06785	SM00470	ParB-like nuclease domain
CV098_RS06810	SM00382	ATPases associated with a variety of cellular activities
CV098_RS06815	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CV098_RS06915	SM00347	helix_turn_helix multiple antibiotic resistance protein
CV098_RS06915	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CV098_RS06950	SM00422	helix_turn_helix, mercury resistance
CV098_RS06960	SM00861	Transketolase, pyrimidine binding domain
CV098_RS06965	SM00347	helix_turn_helix multiple antibiotic resistance protein
CV098_RS07010	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CV098_RS07015	SM00642	Alpha-amylase domain
CV098_RS07040	SM00872	Alpha mannosidase, middle domain
CV098_RS07045	SM01149	CV098_RS07045
CV098_RS07050	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CV098_RS07100	SM00342	helix_turn_helix, arabinose operon control protein
CV098_RS07110	SM01001	AIR carboxylase
CV098_RS07115	SM01209	CV098_RS07115
CV098_RS07115	SM01210	CV098_RS07115
CV098_RS07135	SM00798	AICARFT/IMPCHase bienzyme
CV098_RS07135	SM00851	MGS-like domain
CV098_RS07155	SM00382	ATPases associated with a variety of cellular activities
CV098_RS07170	SM00382	ATPases associated with a variety of cellular activities
CV098_RS07170	SM01086	C-terminal, D2-small domain, of ClpB protein
CV098_RS07200	SM01211	CV098_RS07200
CV098_RS07235	SM00822	CV098_RS07235
CV098_RS07245	SM00347	helix_turn_helix multiple antibiotic resistance protein
CV098_RS07270	SM00829	Enoylreductase
CV098_RS07305	SM00382	ATPases associated with a variety of cellular activities
CV098_RS07380	SM00342	helix_turn_helix, arabinose operon control protein
CV098_RS07470	SM00957	SecA DEAD-like domain
CV098_RS07470	SM00958	SecA preprotein cross-linking domain
CV098_RS07490	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS07615	SM00938	Nitrogen regulatory protein P-II
CV098_RS07625	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CV098_RS07625	SM00387	Histidine kinase-like ATPases
CV098_RS07625	SM00388	His Kinase A (phosphoacceptor) domain
CV098_RS07630	SM00448	cheY-homologous receiver domain
CV098_RS07630	SM00862	Transcriptional regulatory protein, C terminal
CV098_RS07715	SM00226	Low molecular weight phosphatase family
CV098_RS07755	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CV098_RS07780	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CV098_RS07830	SM00382	ATPases associated with a variety of cellular activities
CV098_RS07830	SM00962	SRP54-type protein, GTPase domain
CV098_RS07830	SM00963	SRP54-type protein, helical bundle domain
CV098_RS07840	SM00849	Metallo-beta-lactamase superfamily
CV098_RS07850	SM01130	CV098_RS07850
CV098_RS07860	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CV098_RS07875	SM00861	Transketolase, pyrimidine binding domain
CV098_RS07930	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CV098_RS07930	SM00895	CV098_RS07930
CV098_RS07950	SM00382	ATPases associated with a variety of cellular activities
CV098_RS07965	SM00354	helix_turn _helix lactose operon repressor
CV098_RS07970	SM00998	Adenylosuccinate lyase C-terminus
CV098_RS07995	SM00463	Small MutS-related domain
CV098_RS07995	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CV098_RS07995	SM00534	ATPase domain of DNA mismatch repair MUTS family
CV098_RS08010	SM00354	helix_turn _helix lactose operon repressor
CV098_RS08025	SM00981	CV098_RS08025
CV098_RS08050	SM00382	ATPases associated with a variety of cellular activities
CV098_RS08050	SM00843	CV098_RS08050
CV098_RS08085	SM01095	Cpl-7 lysozyme C-terminal domain
CV098_RS08115	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS08135	SM01234	CV098_RS08135
CV098_RS08140	SM00861	Transketolase, pyrimidine binding domain
CV098_RS08145	SM00387	Histidine kinase-like ATPases
CV098_RS08145	SM00388	His Kinase A (phosphoacceptor) domain
CV098_RS08150	SM00448	cheY-homologous receiver domain
CV098_RS08150	SM00862	Transcriptional regulatory protein, C terminal
CV098_RS08155	SM00354	helix_turn _helix lactose operon repressor
CV098_RS08165	SM00642	Alpha-amylase domain
CV098_RS08170	SM00642	Alpha-amylase domain
CV098_RS08175	SM01266	CV098_RS08175
CV098_RS08180	SM00642	Alpha-amylase domain
CV098_RS08185	SM00642	Alpha-amylase domain
CV098_RS08230	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CV098_RS08255	SM00382	ATPases associated with a variety of cellular activities
CV098_RS08285	SM00421	helix_turn_helix, Lux Regulon
CV098_RS08300	SM00257	Lysin motif
CV098_RS08350	SM00855	Phosphoglycerate mutase family
CV098_RS08360	SM00382	ATPases associated with a variety of cellular activities
CV098_RS08365	SM00382	ATPases associated with a variety of cellular activities
CV098_RS08400	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CV098_RS08465	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CV098_RS08470	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CV098_RS08480	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CV098_RS08485	SM00855	Phosphoglycerate mutase family
CV098_RS08510	SM00387	Histidine kinase-like ATPases
CV098_RS08515	SM00448	cheY-homologous receiver domain
CV098_RS08515	SM00862	Transcriptional regulatory protein, C terminal
CV098_RS08530	SM00382	ATPases associated with a variety of cellular activities
CV098_RS08580	SM00062	Bacterial periplasmic substrate-binding proteins
CV098_RS08580	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CV098_RS08585	SM00382	ATPases associated with a variety of cellular activities
CV098_RS08605	SM00382	ATPases associated with a variety of cellular activities
CV098_RS08645	SM00849	Metallo-beta-lactamase superfamily
CV098_RS08650	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CV098_RS08660	SM00382	ATPases associated with a variety of cellular activities
CV098_RS08720	SM00822	CV098_RS08720
CV098_RS08755	SM00382	ATPases associated with a variety of cellular activities
CV098_RS08770	SM00382	ATPases associated with a variety of cellular activities
CV098_RS08780	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CV098_RS08785	SM00663	RNA polymerase I subunit A N-terminus
CV098_RS08830	SM00829	Enoylreductase
CV098_RS08835	SM00341	Helicase and RNase D C-terminal
CV098_RS08835	SM00487	DEAD-like helicases superfamily
CV098_RS08835	SM00490	helicase superfamily c-terminal domain
CV098_RS08835	SM00956	CV098_RS08835
CV098_RS08855	SM01131	CV098_RS08855
CV098_RS08865	SM01091	Transporter associated domain
CV098_RS08880	SM00986	Uracil DNA glycosylase superfamily
CV098_RS08880	SM00987	UreE urease accessory protein, C-terminal domain 
CV098_RS08895	SM00855	Phosphoglycerate mutase family
CV098_RS08915	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
CV098_RS08955	SM00479	CV098_RS08955
CV098_RS08955	SM00487	DEAD-like helicases superfamily
CV098_RS08955	SM00491	CV098_RS08955
CV098_RS08965	SM01091	Transporter associated domain
CV098_RS08995	SM00382	ATPases associated with a variety of cellular activities
CV098_RS09030	SM01228	CV098_RS09030
CV098_RS09050	SM00840	CV098_RS09050
CV098_RS09070	SM00316	Ribosomal protein S1-like RNA-binding domain
CV098_RS09070	SM00322	K homology RNA-binding domain
CV098_RS09080	SM01400	CV098_RS09080
CV098_RS09125	SM00363	S4 RNA-binding domain
CV098_RS09145	SM00864	Tubulin/FtsZ family, GTPase domain
CV098_RS09145	SM00865	Tubulin/FtsZ family, C-terminal domain
CV098_RS09150	SM00842	Cell division protein FtsA
CV098_RS09160	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CV098_RS09185	SM00422	helix_turn_helix, mercury resistance
CV098_RS09195	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CV098_RS09225	SM01387	CV098_RS09225
CV098_RS09230	SM00220	Serine/Threonine protein kinases, catalytic domain
CV098_RS09230	SM00740	CV098_RS09230
CV098_RS09235	SM00331	Sigma factor PP2C-like phosphatases
CV098_RS09235	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CV098_RS09280	SM00257	Lysin motif
CV098_RS09280	SM00641	Glycosyl hydrolases family 25
CV098_RS09445	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS09470	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS09495	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS09555	SM00487	DEAD-like helicases superfamily
CV098_RS09555	SM00490	helicase superfamily c-terminal domain
CV098_RS09560	SM01409	CV098_RS09560
CV098_RS09565	SM00072	Guanylate kinase homologues.
CV098_RS09570	SM00322	K homology RNA-binding domain
CV098_RS09570	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CV098_RS09615	SM00047	Lysozyme subfamily 2
CV098_RS09740	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CV098_RS09840	SM00873	B3/4 domain
CV098_RS09840	SM00874	tRNA synthetase B5 domain
CV098_RS09840	SM00896	Ferredoxin-fold anticodon binding domain
CV098_RS09860	SM00495	Chitin-binding domain type 3
CV098_RS09860	SM00636	CV098_RS09860
CV098_RS09870	SM00788	Adenylosuccinate synthetase
CV098_RS09960	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS10010	SM00422	helix_turn_helix, mercury resistance
CV098_RS10025	SM01038	Beta galactosidase small chain
CV098_RS10030	SM01266	CV098_RS10030
CV098_RS10110	SM00382	ATPases associated with a variety of cellular activities
CV098_RS10140	SM00649	Ribosomal protein L11/L12
CV098_RS10150	SM00100	Cyclic nucleotide-monophosphate binding domain
CV098_RS10150	SM00419	helix_turn_helix, cAMP Regulatory protein
CV098_RS10165	SM00316	Ribosomal protein S1-like RNA-binding domain
CV098_RS10210	SM00838	Elongation factor G C-terminus
CV098_RS10220	SM00382	ATPases associated with a variety of cellular activities
CV098_RS10235	SM00850	LytTr DNA-binding domain
CV098_RS10250	SM00450	Rhodanese Homology Domain
CV098_RS10315	SM00836	DALR anticodon binding domain
CV098_RS10315	SM01016	Arginyl tRNA synthetase N terminal dom
CV098_RS10335	SM00487	DEAD-like helicases superfamily
CV098_RS10335	SM00490	helicase superfamily c-terminal domain
CV098_RS10405	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS10435	SM00382	ATPases associated with a variety of cellular activities
CV098_RS10470	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS10480	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS10490	SM00271	DnaJ molecular chaperone homology domain
CV098_RS10495	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS10505	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CV098_RS10505	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CV098_RS10535	SM00357	Cold shock protein domain
CV098_RS10540	SM00357	Cold shock protein domain
CV098_RS10555	SM00327	von Willebrand factor (vWF) type A domain
CV098_RS10585	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CV098_RS10585	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
CV098_RS10595	SM00062	Bacterial periplasmic substrate-binding proteins
CV098_RS10615	SM00014	Acid phosphatase homologues
CV098_RS10645	SM00670	Large family of predicted nucleotide-binding domains
CV098_RS10655	SM00382	ATPases associated with a variety of cellular activities
CV098_RS10680	SM00662	RNA polymerases D
CV098_RS10700	SM00316	Ribosomal protein S1-like RNA-binding domain
CV098_RS10760	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CV098_RS10765	SM01374	CV098_RS10765
CV098_RS10785	SM00322	K homology RNA-binding domain
CV098_RS10800	SM01382	CV098_RS10800
CV098_RS10800	SM01383	CV098_RS10800
CV098_RS10820	SM01403	CV098_RS10820
CV098_RS10840	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CV098_RS10840	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CV098_RS10870	SM00382	ATPases associated with a variety of cellular activities
CV098_RS10880	SM00347	helix_turn_helix multiple antibiotic resistance protein
CV098_RS10920	SM00479	CV098_RS10920
CV098_RS10920	SM00481	DNA polymerase alpha chain like domain
CV098_RS10940	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CV098_RS10955	SM01323	CV098_RS10955
CV098_RS10970	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CV098_RS11000	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CV098_RS11000	SM00474	3'-5' exonuclease
CV098_RS11000	SM00475	5'-3' exonuclease
CV098_RS11000	SM00482	DNA polymerase A domain
CV098_RS11010	SM00354	helix_turn _helix lactose operon repressor
CV098_RS11060	SM00729	Elongator protein 3, MiaB family, Radical SAM
CV098_RS11155	SM00873	B3/4 domain
CV098_RS11210	SM01350	CV098_RS11210
CV098_RS11255	SM00382	ATPases associated with a variety of cellular activities
CV098_RS11270	SM00830	Chorismate mutase type II
CV098_RS11300	SM01252	CV098_RS11300
CV098_RS11340	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS11355	SM01040	BRO family, N-terminal domain
CV098_RS11390	SM00942	Primase C terminal 1 (PriCT-1)
CV098_RS11390	SM00943	Bifunctional DNA primase/polymerase, N-terminal
CV098_RS11395	SM00885	D5 N terminal like
CV098_RS11440	SM01230	CV098_RS11440
CV098_RS11445	SM00422	helix_turn_helix, mercury resistance
CV098_RS11450	SM00226	Low molecular weight phosphatase family
CV098_RS11455	SM00382	ATPases associated with a variety of cellular activities
CV098_RS11470	SM00530	Helix-turn-helix XRE-family like proteins 
CV098_RS11475	SM00382	ATPases associated with a variety of cellular activities
CV098_RS11480	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CV098_RS11485	SM00853	MutL C terminal dimerisation domain
CV098_RS11485	SM01340	CV098_RS11485
CV098_RS11495	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CV098_RS11495	SM00534	ATPase domain of DNA mismatch repair MUTS family
CV098_RS11545	SM00271	DnaJ molecular chaperone homology domain
CV098_RS11595	SM00419	helix_turn_helix, cAMP Regulatory protein
CV098_RS11625	SM00363	S4 RNA-binding domain
CV098_RS11645	SM00487	DEAD-like helicases superfamily
CV098_RS11645	SM00490	helicase superfamily c-terminal domain
CV098_RS11655	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CV098_RS11670	SM00831	Cation transporter/ATPase, N-terminus
CV098_RS11760	SM00382	ATPases associated with a variety of cellular activities
CV098_RS11780	SM00838	Elongation factor G C-terminus
CV098_RS11780	SM00889	Elongation factor G, domain IV
CV098_RS11795	SM00936	Penicillin-binding protein 5, C-terminal domain 
CV098_RS11810	SM00729	Elongator protein 3, MiaB family, Radical SAM
