locus-tag class description APT61_RS00010 PF03899 ATP synthase I chain APT61_RS00015 PF02527 rRNA small subunit methyltransferase G APT61_RS00020 PF13932 GidA associated domain APT61_RS00020 PF01134 Glucose inhibited division protein A APT61_RS00025 PF00258 Flavodoxin APT61_RS00030 PF01037 Lrp/AsnC ligand binding domain APT61_RS00035 PF03590 Aspartate-ammonia ligase APT61_RS00040 PF05762 VWA domain containing CoxE-like protein APT61_RS00045 PF17868 AAA lid domain APT61_RS00045 PF07728 AAA domain (dynein-related subfamily) APT61_RS00045 PF12592 Protein of unknown function (DUF3763) APT61_RS00050 PF02705 K+ potassium transporter APT61_RS00055 PF05025 RbsD / FucU transport protein family APT61_RS00060 PF00005 ABC transporter APT61_RS00065 PF02653 Branched-chain amino acid transport system / permease component APT61_RS00070 PF13407 Periplasmic binding protein domain APT61_RS00075 PF00294 pfkB family carbohydrate kinase APT61_RS00080 PF00356 Bacterial regulatory proteins, lacI family APT61_RS00085 PF07690 Major Facilitator Superfamily APT61_RS00090 PF07729 FCD domain APT61_RS00090 PF00392 Bacterial regulatory proteins, gntR family APT61_RS00120 PF03205 Molybdopterin guanine dinucleotide synthesis protein B APT61_RS00125 PF12804 MobA-like NTP transferase domain APT61_RS00130 PF06288 Protein of unknown function (DUF1040) APT61_RS00135 PF01636 Phosphotransferase enzyme family APT61_RS00140 PF01323 DSBA-like thioredoxin domain APT61_RS00145 PF01553 Acyltransferase APT61_RS00150 PF01612 3'-5' exonuclease APT61_RS00150 PF00476 DNA polymerase family A APT61_RS00150 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain APT61_RS00150 PF01367 5'-3' exonuclease, C-terminal SAM fold APT61_RS00155 PF01926 50S ribosome-binding GTPase APT61_RS00160 PF04220 Der GTPase activator (YihI) APT61_RS00165 PF06969 HemN C-terminal domain APT61_RS00165 PF04055 Radical SAM superfamily APT61_RS00170 PF02954 Bacterial regulatory protein, Fis family APT61_RS00170 PF00072 Response regulator receiver domain APT61_RS00170 PF00158 Sigma-54 interaction domain APT61_RS00175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS00175 PF00512 His Kinase A (phospho-acceptor) domain APT61_RS00175 PF00989 PAS fold APT61_RS00180 PF00120 Glutamine synthetase, catalytic domain APT61_RS00180 PF03951 Glutamine synthetase, beta-Grasp domain APT61_RS00185 PF03144 Elongation factor Tu domain 2 APT61_RS00185 PF00679 Elongation factor G C-terminus APT61_RS00185 PF00009 Elongation factor Tu GTP binding domain APT61_RS00190 PF06178 Oligogalacturonate-specific porin protein (KdgM) APT61_RS00205 PF01055 Glycosyl hydrolases family 31 APT61_RS00215 PF01791 DeoC/LacD family aldolase APT61_RS00220 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase APT61_RS00220 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APT61_RS00225 PF00294 pfkB family carbohydrate kinase APT61_RS00230 PF08220 DeoR-like helix-turn-helix domain APT61_RS00230 PF00455 DeoR C terminal sensor domain APT61_RS00235 PF13419 Haloacid dehalogenase-like hydrolase APT61_RS00240 PF03631 Virulence factor BrkB APT61_RS00245 PF02580 D-Tyr-tRNA(Tyr) deacylase APT61_RS00250 PF09500 Putative thioesterase (yiiD_Cterm) APT61_RS00250 PF00583 Acetyltransferase (GNAT) family APT61_RS00255 PF06316 Enterobacterial Ail/Lom protein APT61_RS00260 PF18228 CdiI N-terminal domain APT61_RS00265 PF05860 haemagglutination activity domain APT61_RS00265 PF05594 Haemagluttinin repeat APT61_RS00265 PF04829 Pre-toxin domain with VENN motif APT61_RS00265 PF15526 Novel toxin 21 APT61_RS00265 PF13332 Hemagglutinin repeat APT61_RS00285 PF13332 Hemagglutinin repeat APT61_RS00285 PF13018 Extended Signal Peptide of Type V secretion system APT61_RS00285 PF04829 Pre-toxin domain with VENN motif APT61_RS00285 PF05860 haemagglutination activity domain APT61_RS00305 PF04829 Pre-toxin domain with VENN motif APT61_RS00315 PF13332 Hemagglutinin repeat APT61_RS00315 PF04829 Pre-toxin domain with VENN motif APT61_RS00315 PF13018 Extended Signal Peptide of Type V secretion system APT61_RS00315 PF05860 haemagglutination activity domain APT61_RS00320 PF02794 RTX toxin acyltransferase family APT61_RS00325 PF17287 POTRA domain APT61_RS00325 PF08479 POTRA domain, ShlB-type APT61_RS00325 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB APT61_RS00330 PF04216 Protein involved in formate dehydrogenase formation APT61_RS00335 PF01292 Prokaryotic cytochrome b561 APT61_RS00340 PF13247 4Fe-4S dicluster domain APT61_RS00340 PF09163 Formate dehydrogenase N, transmembrane APT61_RS00345 PF01568 Molydopterin dinucleotide binding domain APT61_RS00345 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APT61_RS00345 PF00384 Molybdopterin oxidoreductase APT61_RS00350 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APT61_RS00350 PF01568 Molydopterin dinucleotide binding domain APT61_RS00350 PF00384 Molybdopterin oxidoreductase APT61_RS00355 PF02634 FdhD/NarQ family APT61_RS00370 PF03591 AzlC protein APT61_RS00380 PF00356 Bacterial regulatory proteins, lacI family APT61_RS00380 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family APT61_RS00385 PF16874 Glycosyl hydrolase family 36 C-terminal domain APT61_RS00385 PF16875 Glycosyl hydrolase family 36 N-terminal domain APT61_RS00390 PF01306 LacY proton/sugar symporter APT61_RS00395 PF05336 L-rhamnose mutarotase APT61_RS00400 PF00465 Iron-containing alcohol dehydrogenase APT61_RS00405 PF02653 Branched-chain amino acid transport system / permease component APT61_RS00410 PF02653 Branched-chain amino acid transport system / permease component APT61_RS00415 PF00005 ABC transporter APT61_RS00420 PF13407 Periplasmic binding protein domain APT61_RS00425 PF00596 Class II Aldolase and Adducin N-terminal domain APT61_RS00430 PF06134 L-rhamnose isomerase (RhaA) APT61_RS00435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APT61_RS00435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APT61_RS00440 PF02311 AraC-like ligand binding domain APT61_RS00440 PF12833 Helix-turn-helix domain APT61_RS00445 PF12833 Helix-turn-helix domain APT61_RS00445 PF02311 AraC-like ligand binding domain APT61_RS00450 PF02777 Iron/manganese superoxide dismutases, C-terminal domain APT61_RS00450 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain APT61_RS00455 PF03473 MOSC domain APT61_RS00455 PF03475 3-alpha domain APT61_RS00460 PF16527 Two-component sensor protein CpxA, periplasmic domain APT61_RS00460 PF00672 HAMP domain APT61_RS00460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS00460 PF00512 His Kinase A (phospho-acceptor) domain APT61_RS00465 PF00486 Transcriptional regulatory protein, C terminal APT61_RS00465 PF00072 Response regulator receiver domain APT61_RS00470 PF07813 LTXXQ motif family protein APT61_RS00475 PF16916 Dimerisation domain of Zinc Transporter APT61_RS00475 PF01545 Cation efflux family APT61_RS00480 PF00365 Phosphofructokinase APT61_RS00490 PF02611 CDP-diacylglycerol pyrophosphatase APT61_RS00500 PF00121 Triosephosphate isomerase APT61_RS00505 PF07305 Protein of unknown function (DUF1454) APT61_RS00510 PF05656 Protein of unknown function (DUF805) APT61_RS00515 PF00970 Oxidoreductase FAD-binding domain APT61_RS00515 PF00175 Oxidoreductase NAD-binding domain APT61_RS00520 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded APT61_RS00525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APT61_RS00525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APT61_RS00530 PF00230 Major intrinsic protein APT61_RS00535 PF06005 Cell division protein ZapB APT61_RS00550 PF03737 Aldolase/RraA APT61_RS00555 PF01040 UbiA prenyltransferase family APT61_RS00560 PF07724 AAA domain (Cdc48 subfamily) APT61_RS00560 PF00004 ATPase family associated with various cellular activities (AAA) APT61_RS00560 PF10431 C-terminal, D2-small domain, of ClpB protein APT61_RS00565 PF00227 Proteasome subunit APT61_RS00570 PF05036 Sporulation related domain APT61_RS00575 PF00356 Bacterial regulatory proteins, lacI family APT61_RS00580 PF00270 DEAD/DEAH box helicase APT61_RS00580 PF17764 3′ DNA-binding domain (3′BD) APT61_RS00580 PF00271 Helicase conserved C-terminal domain APT61_RS00580 PF18319 PriA DNA helicase Cys-rich region (CRR) domain APT61_RS00580 PF18074 Primosomal protein N C-terminal domain APT61_RS00585 PF01197 Ribosomal protein L31 APT61_RS00590 PF06178 Oligogalacturonate-specific porin protein (KdgM) APT61_RS00595 PF01340 Met Apo-repressor, MetJ APT61_RS00600 PF01053 Cys/Met metabolism PLP-dependent enzyme APT61_RS00605 PF00696 Amino acid kinase family APT61_RS00605 PF03447 Homoserine dehydrogenase, NAD binding domain APT61_RS00605 PF00742 Homoserine dehydrogenase APT61_RS00610 PF02219 Methylenetetrahydrofolate reductase APT61_RS00615 PF00141 Peroxidase APT61_RS00620 PF00465 Iron-containing alcohol dehydrogenase APT61_RS00625 PF00923 Transaldolase/Fructose-6-phosphate aldolase APT61_RS00630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APT61_RS00630 PF05524 PEP-utilising enzyme, N-terminal APT61_RS00630 PF00381 PTS HPr component phosphorylation site APT61_RS00630 PF00391 PEP-utilising enzyme, mobile domain APT61_RS00630 PF02896 PEP-utilising enzyme, TIM barrel domain APT61_RS00640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APT61_RS00645 PF01228 Glycine radical APT61_RS00645 PF02901 Pyruvate formate lyase-like APT61_RS00650 PF04055 Radical SAM superfamily APT61_RS00655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APT61_RS00660 PF12833 Helix-turn-helix domain APT61_RS00665 PF00311 Phosphoenolpyruvate carboxylase APT61_RS00670 PF01546 Peptidase family M20/M25/M40 APT61_RS00670 PF07687 Peptidase dimerisation domain APT61_RS00675 PF01118 Semialdehyde dehydrogenase, NAD binding domain APT61_RS00675 PF02774 Semialdehyde dehydrogenase, dimerisation domain APT61_RS00680 PF00696 Amino acid kinase family APT61_RS00685 PF14698 Argininosuccinate lyase C-terminal APT61_RS00685 PF00206 Lyase APT61_RS00690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS00690 PF03466 LysR substrate binding domain APT61_RS00695 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT61_RS00695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APT61_RS00700 PF00440 Bacterial regulatory proteins, tetR family APT61_RS00705 PF07226 Protein of unknown function (DUF1422) APT61_RS00710 PF05958 tRNA (Uracil-5-)-methyltransferase APT61_RS00715 PF00593 TonB dependent receptor APT61_RS00715 PF07715 TonB-dependent Receptor Plug Domain APT61_RS00720 PF01177 Asp/Glu/Hydantoin racemase APT61_RS00765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS00765 PF03466 LysR substrate binding domain APT61_RS00770 PF04219 Protein of unknown function, DUF APT61_RS00775 PF01078 Magnesium chelatase, subunit ChlI APT61_RS00775 PF13335 Magnesium chelatase, subunit ChlI C-terminal APT61_RS00780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APT61_RS00780 PF00205 Thiamine pyrophosphate enzyme, central domain APT61_RS00780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APT61_RS00790 PF01063 Amino-transferase class IV APT61_RS00795 PF00920 Dehydratase family APT61_RS00800 PF00585 C-terminal regulatory domain of Threonine dehydratase APT61_RS00800 PF00291 Pyridoxal-phosphate dependent enzyme APT61_RS00805 PF03466 LysR substrate binding domain APT61_RS00805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS00810 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain APT61_RS00810 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain APT61_RS00825 PF13361 UvrD-like helicase C-terminal domain APT61_RS00825 PF00580 UvrD/REP helicase N-terminal domain APT61_RS00830 PF02541 Ppx/GppA phosphatase family APT61_RS00835 PF00270 DEAD/DEAH box helicase APT61_RS00835 PF00271 Helicase conserved C-terminal domain APT61_RS00840 PF00085 Thioredoxin APT61_RS00845 PF07498 Rho termination factor, N-terminal domain APT61_RS00845 PF07497 Rho termination factor, RNA-binding domain APT61_RS00845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APT61_RS00850 PF00953 Glycosyl transferase family 4 APT61_RS00855 PF02706 Chain length determinant protein APT61_RS00860 PF02350 UDP-N-acetylglucosamine 2-epimerase APT61_RS00865 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain APT61_RS00865 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain APT61_RS00865 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain APT61_RS00875 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family APT61_RS00880 PF01943 Polysaccharide biosynthesis protein APT61_RS00885 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 APT61_RS00890 PF06899 WzyE protein, O-antigen assembly polymerase APT61_RS00895 PF03808 Glycosyl transferase WecB/TagA/CpsF family APT61_RS00900 PF00324 Amino acid permease APT61_RS00935 PF07219 HemY protein N-terminus APT61_RS00935 PF07719 Tetratricopeptide repeat APT61_RS00940 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase APT61_RS00945 PF02602 Uroporphyrinogen-III synthase HemD APT61_RS00950 PF03900 Porphobilinogen deaminase, C-terminal domain APT61_RS00950 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain APT61_RS00955 PF12633 Adenylate cyclase NT domain APT61_RS00955 PF01295 Adenylate cyclase, class-I APT61_RS00960 PF01491 Frataxin-like domain APT61_RS00965 PF13627 Prokaryotic lipoprotein-attachment site APT61_RS00970 PF01678 Diaminopimelate epimerase APT61_RS00975 PF04340 Protein of unknown function, DUF484 APT61_RS00980 PF02899 Phage integrase, N-terminal SAM-like domain APT61_RS00980 PF00589 Phage integrase family APT61_RS00985 PF13419 Haloacid dehalogenase-like hydrolase APT61_RS00990 PF13361 UvrD-like helicase C-terminal domain APT61_RS00990 PF00580 UvrD/REP helicase N-terminal domain APT61_RS00995 PF01544 CorA-like Mg2+ transporter protein APT61_RS01000 PF00892 EamA-like transporter family APT61_RS01005 PF03061 Thioesterase superfamily APT61_RS01010 PF02253 Phospholipase A1 APT61_RS01015 PF00270 DEAD/DEAH box helicase APT61_RS01015 PF09382 RQC domain APT61_RS01015 PF16124 RecQ zinc-binding APT61_RS01015 PF00570 HRDC domain APT61_RS01015 PF00271 Helicase conserved C-terminal domain APT61_RS01020 PF01810 LysE type translocator APT61_RS01025 PF01810 LysE type translocator APT61_RS01030 PF12146 Serine aminopeptidase, S33 APT61_RS01040 PF00892 EamA-like transporter family APT61_RS01045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS01045 PF03466 LysR substrate binding domain APT61_RS01050 PF01717 Cobalamin-independent synthase, Catalytic domain APT61_RS01050 PF08267 Cobalamin-independent synthase, N-terminal domain APT61_RS01055 PF01738 Dienelactone hydrolase family APT61_RS01060 PF01048 Phosphorylase superfamily APT61_RS01065 PF02646 RmuC family APT61_RS01070 PF01209 ubiE/COQ5 methyltransferase family APT61_RS01075 PF02036 SCP-2 sterol transfer family APT61_RS01080 PF03109 ABC1 family APT61_RS01085 PF02416 mttA/Hcf106 family APT61_RS01095 PF00902 Sec-independent protein translocase protein (TatC) APT61_RS01100 PF01026 TatD related DNase APT61_RS01105 PF02357 Transcription termination factor nusG APT61_RS01110 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase APT61_RS01115 PF00175 Oxidoreductase NAD-binding domain APT61_RS01115 PF00970 Oxidoreductase FAD-binding domain APT61_RS01120 PF00108 Thiolase, N-terminal domain APT61_RS01120 PF02803 Thiolase, C-terminal domain APT61_RS01125 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain APT61_RS01125 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain APT61_RS01125 PF00378 Enoyl-CoA hydratase/isomerase APT61_RS01130 PF00557 Metallopeptidase family M24 APT61_RS01135 PF01205 Uncharacterized protein family UPF0029 APT61_RS01135 PF09186 Domain of unknown function (DUF1949) APT61_RS01140 PF02386 Cation transport protein APT61_RS01145 PF12724 Flavodoxin domain APT61_RS01180 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain APT61_RS01180 PF01565 FAD binding domain APT61_RS01185 PF08279 HTH domain APT61_RS01185 PF02237 Biotin protein ligase C terminal domain APT61_RS01185 PF03099 Biotin/lipoate A/B protein ligase family APT61_RS01190 PF00672 HAMP domain APT61_RS01190 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS01190 PF17154 Gammaproteobacterial periplasmic sensor domain APT61_RS01190 PF00563 EAL domain APT61_RS01195 PF00375 Sodium:dicarboxylate symporter family APT61_RS01200 PF05193 Peptidase M16 inactive domain APT61_RS01200 PF00675 Insulinase (Peptidase family M16) APT61_RS01205 PF00294 pfkB family carbohydrate kinase APT61_RS01210 PF00563 EAL domain APT61_RS01215 PF05170 AsmA family APT61_RS01220 PF00083 Sugar (and other) transporter APT61_RS01220 PF07690 Major Facilitator Superfamily APT61_RS01225 PF03631 Virulence factor BrkB APT61_RS01230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS01230 PF03466 LysR substrate binding domain APT61_RS01240 PF13302 Acetyltransferase (GNAT) domain APT61_RS01250 PF01204 Trehalase APT61_RS01270 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT61_RS01270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APT61_RS01275 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ APT61_RS01280 PF01432 Peptidase family M3 APT61_RS01285 PF04445 Putative SAM-dependent methyltransferase APT61_RS01290 PF00582 Universal stress protein family APT61_RS01295 PF10625 Universal stress protein B (UspB) APT61_RS01305 PF01384 Phosphate transporter family APT61_RS01315 PF03741 Integral membrane protein TerC family APT61_RS01325 PF00106 short chain dehydrogenase APT61_RS01330 PF01648 4'-phosphopantetheinyl transferase superfamily APT61_RS01335 PF00109 Beta-ketoacyl synthase, N-terminal domain APT61_RS01335 PF02801 Beta-ketoacyl synthase, C-terminal domain APT61_RS01350 PF00109 Beta-ketoacyl synthase, N-terminal domain APT61_RS01350 PF02801 Beta-ketoacyl synthase, C-terminal domain APT61_RS01375 PF00535 Glycosyl transferase family 2 APT61_RS01385 PF00550 Phosphopantetheine attachment site APT61_RS01385 PF13193 AMP-binding enzyme C-terminal domain APT61_RS01385 PF00975 Thioesterase domain APT61_RS01385 PF00501 AMP-binding enzyme APT61_RS01385 PF00668 Condensation domain APT61_RS01395 PF00550 Phosphopantetheine attachment site APT61_RS01400 PF00550 Phosphopantetheine attachment site APT61_RS01420 PF01594 AI-2E family transporter APT61_RS01425 PF07690 Major Facilitator Superfamily APT61_RS01430 PF08786 DcrB APT61_RS01435 PF02592 Putative vitamin uptake transporter APT61_RS01440 PF01206 Sulfurtransferase TusA APT61_RS01445 PF03480 Bacterial extracellular solute-binding protein, family 7 APT61_RS01455 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component APT61_RS01460 PF00403 Heavy-metal-associated domain APT61_RS01465 PF07947 YhhN family APT61_RS01470 PF10694 Protein of unknown function (DUF2500) APT61_RS01475 PF06611 Protein of unknown function (DUF1145) APT61_RS01485 PF02881 SRP54-type protein, helical bundle domain APT61_RS01485 PF00448 SRP54-type protein, GTPase domain APT61_RS01490 PF00005 ABC transporter APT61_RS01495 PF02687 FtsX-like permease family APT61_RS01495 PF18075 FtsX extracellular domain APT61_RS01500 PF00140 Sigma-70 factor, region 1.2 APT61_RS01500 PF04545 Sigma-70, region 4 APT61_RS01500 PF04542 Sigma-70 region 2 APT61_RS01505 PF13458 Periplasmic binding protein APT61_RS01515 PF04011 LemA family APT61_RS01520 PF12568 Acetyltransferase (GNAT) domain, PanZ APT61_RS01525 PF13458 Periplasmic binding protein APT61_RS01530 PF02653 Branched-chain amino acid transport system / permease component APT61_RS01535 PF02653 Branched-chain amino acid transport system / permease component APT61_RS01535 PF11862 Domain of unknown function (DUF3382) APT61_RS01540 PF12399 Branched-chain amino acid ATP-binding cassette transporter APT61_RS01540 PF00005 ABC transporter APT61_RS01545 PF00005 ABC transporter APT61_RS01550 PF13416 Bacterial extracellular solute-binding protein APT61_RS01555 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS01560 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS01565 PF17912 MalK OB fold domain APT61_RS01565 PF00005 ABC transporter APT61_RS01570 PF03009 Glycerophosphoryl diester phosphodiesterase family APT61_RS01575 PF10956 Protein of unknown function (DUF2756) APT61_RS01585 PF00583 Acetyltransferase (GNAT) family APT61_RS01590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APT61_RS01590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APT61_RS01595 PF17954 Quercetinase C-terminal cupin domain APT61_RS01595 PF02678 Pirin APT61_RS01600 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family APT61_RS01600 PF00356 Bacterial regulatory proteins, lacI family APT61_RS01605 PF01202 Shikimate kinase APT61_RS01610 PF02447 GntP family permease APT61_RS01615 PF01914 MarC family integral membrane protein APT61_RS01620 PF01118 Semialdehyde dehydrogenase, NAD binding domain APT61_RS01620 PF02774 Semialdehyde dehydrogenase, dimerisation domain APT61_RS01625 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APT61_RS01625 PF00128 Alpha amylase, catalytic domain APT61_RS01625 PF02806 Alpha amylase, C-terminal all-beta domain APT61_RS01630 PF00128 Alpha amylase, catalytic domain APT61_RS01630 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APT61_RS01630 PF18390 Glycogen debranching enzyme C-terminal domain APT61_RS01635 PF00483 Nucleotidyl transferase APT61_RS01640 PF00534 Glycosyl transferases group 1 APT61_RS01640 PF08323 Starch synthase catalytic domain APT61_RS01645 PF00343 Carbohydrate phosphorylase APT61_RS01650 PF16901 C-terminal domain of alpha-glycerophosphate oxidase APT61_RS01650 PF01266 FAD dependent oxidoreductase APT61_RS01655 PF00581 Rhodanese-like domain APT61_RS01660 PF01694 Rhomboid family APT61_RS01660 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease APT61_RS01665 PF08220 DeoR-like helix-turn-helix domain APT61_RS01665 PF00455 DeoR C terminal sensor domain APT61_RS01670 PF00196 Bacterial regulatory proteins, luxR family APT61_RS01670 PF17874 MalT-like TPR region APT61_RS01675 PF00343 Carbohydrate phosphorylase APT61_RS01680 PF02446 4-alpha-glucanotransferase APT61_RS01685 PF02447 GntP family permease APT61_RS01690 PF01521 Iron-sulphur cluster biosynthesis APT61_RS01690 PF01106 NifU-like domain APT61_RS01695 PF00156 Phosphoribosyl transferase domain APT61_RS01700 PF00561 alpha/beta hydrolase fold APT61_RS01710 PF09012 FeoC like transcriptional regulator APT61_RS01715 PF07670 Nucleoside recognition APT61_RS01715 PF02421 Ferrous iron transport protein B APT61_RS01715 PF17910 FeoB cytosolic helical domain APT61_RS01715 PF07664 Ferrous iron transport protein B C terminus APT61_RS01720 PF04023 FeoA domain APT61_RS01725 PF09371 Tex-like protein N-terminal domain APT61_RS01725 PF16921 Tex protein YqgF-like domain APT61_RS01725 PF00575 S1 RNA binding domain APT61_RS01725 PF17674 HHH domain APT61_RS01730 PF01272 Transcription elongation factor, GreA/GreB, C-term APT61_RS01730 PF03449 Transcription elongation factor, N-terminal APT61_RS01735 PF00072 Response regulator receiver domain APT61_RS01735 PF00486 Transcriptional regulatory protein, C terminal APT61_RS01740 PF00512 His Kinase A (phospho-acceptor) domain APT61_RS01740 PF00672 HAMP domain APT61_RS01740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS01745 PF01293 Phosphoenolpyruvate carboxykinase APT61_RS01750 PF01430 Hsp33 protein APT61_RS01755 PF01479 S4 domain APT61_RS01760 PF13419 Haloacid dehalogenase-like hydrolase APT61_RS01765 PF07095 Intracellular growth attenuator protein IgaA APT61_RS01770 PF00293 NUDIX domain APT61_RS01775 PF00912 Transglycosylase APT61_RS01775 PF17092 Penicillin-binding protein OB-like domain APT61_RS01775 PF00905 Penicillin binding protein transpeptidase domain APT61_RS01800 PF03958 Bacterial type II/III secretion system short domain APT61_RS01800 PF00263 Bacterial type II and III secretion system protein APT61_RS01805 PF01202 Shikimate kinase APT61_RS01810 PF01761 3-dehydroquinate synthase APT61_RS01815 PF05036 Sporulation related domain APT61_RS01820 PF02086 D12 class N6 adenine-specific DNA methyltransferase APT61_RS01825 PF00834 Ribulose-phosphate 3 epimerase family APT61_RS01830 PF13419 Haloacid dehalogenase-like hydrolase APT61_RS01835 PF00579 tRNA synthetases class I (W and Y) APT61_RS01840 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APT61_RS01840 PF14824 Sirohaem biosynthesis protein central APT61_RS01840 PF10414 Sirohaem synthase dimerisation region APT61_RS01845 PF01226 Formate/nitrite transporter APT61_RS01850 PF13806 Rieske-like [2Fe-2S] domain APT61_RS01855 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT61_RS01855 PF04324 BFD-like [2Fe-2S] binding domain APT61_RS01855 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APT61_RS01855 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APT61_RS01855 PF18267 Rubredoxin NAD+ reductase C-terminal domain APT61_RS01860 PF07969 Amidohydrolase family APT61_RS01865 PF07690 Major Facilitator Superfamily APT61_RS01870 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD APT61_RS01875 PF02661 Fic/DOC family APT61_RS01880 PF00117 Glutamine amidotransferase class-I APT61_RS01885 PF00202 Aminotransferase class-III APT61_RS01890 PF12805 FUSC-like inner membrane protein yccS APT61_RS01895 PF13545 Crp-like helix-turn-helix domain APT61_RS01895 PF00027 Cyclic nucleotide-binding domain APT61_RS01900 PF02566 OsmC-like protein APT61_RS01905 PF00485 Phosphoribulokinase / Uridine kinase family APT61_RS01910 PF06794 Uncharacterised protein family (UPF0270) APT61_RS01915 PF00561 alpha/beta hydrolase fold APT61_RS01920 PF16957 Malonate decarboxylase, alpha subunit, transporter APT61_RS01925 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase APT61_RS01930 PF06857 Malonate decarboxylase delta subunit (MdcD) APT61_RS01935 PF01039 Carboxyl transferase domain APT61_RS01945 PF03547 Membrane transport protein APT61_RS01950 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG APT61_RS01955 PF00698 Acyl transferase domain APT61_RS01960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS01960 PF03466 LysR substrate binding domain APT61_RS01965 PF00005 ABC transporter APT61_RS01965 PF12848 ABC transporter APT61_RS01970 PF02525 Flavodoxin-like fold APT61_RS01975 PF00999 Sodium/hydrogen exchanger family APT61_RS01975 PF02254 TrkA-N domain APT61_RS01980 PF09526 Probable metal-binding protein (DUF2387) APT61_RS01985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APT61_RS01990 PF04102 SlyX APT61_RS01995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APT61_RS01995 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase APT61_RS02000 PF08348 YheO-like PAS domain APT61_RS02000 PF13309 HTH domain APT61_RS02005 PF02635 DsrE/DsrF-like family APT61_RS02010 PF02635 DsrE/DsrF-like family APT61_RS02015 PF04077 DsrH like protein APT61_RS02020 PF00164 Ribosomal protein S12/S23 APT61_RS02025 PF00177 Ribosomal protein S7p/S5e APT61_RS02030 PF00679 Elongation factor G C-terminus APT61_RS02030 PF03144 Elongation factor Tu domain 2 APT61_RS02030 PF03764 Elongation factor G, domain IV APT61_RS02030 PF00009 Elongation factor Tu GTP binding domain APT61_RS02030 PF14492 Elongation Factor G, domain II APT61_RS02035 PF00009 Elongation factor Tu GTP binding domain APT61_RS02035 PF03143 Elongation factor Tu C-terminal domain APT61_RS02035 PF03144 Elongation factor Tu domain 2 APT61_RS02040 PF04324 BFD-like [2Fe-2S] binding domain APT61_RS02045 PF00210 Ferritin-like domain APT61_RS02050 PF01478 Type IV leader peptidase family APT61_RS02055 PF00338 Ribosomal protein S10p/S20e APT61_RS02060 PF00297 Ribosomal protein L3 APT61_RS02065 PF00573 Ribosomal protein L4/L1 family APT61_RS02070 PF00276 Ribosomal protein L23 APT61_RS02075 PF00181 Ribosomal Proteins L2, RNA binding domain APT61_RS02075 PF03947 Ribosomal Proteins L2, C-terminal domain APT61_RS02080 PF00203 Ribosomal protein S19 APT61_RS02085 PF00237 Ribosomal protein L22p/L17e APT61_RS02090 PF07650 KH domain APT61_RS02090 PF00189 Ribosomal protein S3, C-terminal domain APT61_RS02095 PF00252 Ribosomal protein L16p/L10e APT61_RS02100 PF00831 Ribosomal L29 protein APT61_RS02105 PF00366 Ribosomal protein S17 APT61_RS02110 PF00238 Ribosomal protein L14p/L23e APT61_RS02115 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 APT61_RS02115 PF00467 KOW motif APT61_RS02120 PF00673 ribosomal L5P family C-terminus APT61_RS02120 PF00281 Ribosomal protein L5 APT61_RS02125 PF00253 Ribosomal protein S14p/S29e APT61_RS02130 PF00410 Ribosomal protein S8 APT61_RS02135 PF00347 Ribosomal protein L6 APT61_RS02140 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast APT61_RS02145 PF03719 Ribosomal protein S5, C-terminal domain APT61_RS02145 PF00333 Ribosomal protein S5, N-terminal domain APT61_RS02150 PF00327 Ribosomal protein L30p/L7e APT61_RS02155 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A APT61_RS02160 PF00344 SecY translocase APT61_RS02165 PF00416 Ribosomal protein S13/S18 APT61_RS02170 PF00411 Ribosomal protein S11 APT61_RS02175 PF00163 Ribosomal protein S4/S9 N-terminal domain APT61_RS02175 PF01479 S4 domain APT61_RS02180 PF01000 RNA polymerase Rpb3/RpoA insert domain APT61_RS02180 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain APT61_RS02180 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain APT61_RS02185 PF01196 Ribosomal protein L17 APT61_RS02190 PF09350 Domain of unknown function (DUF1992) APT61_RS02195 PF13411 MerR HTH family regulatory protein APT61_RS02200 PF01741 Large-conductance mechanosensitive channel, MscL APT61_RS02205 PF02080 TrkA-C domain APT61_RS02205 PF02254 TrkA-N domain APT61_RS02210 PF01189 16S rRNA methyltransferase RsmB/F APT61_RS02210 PF01029 NusB family APT61_RS02215 PF00551 Formyl transferase APT61_RS02215 PF02911 Formyl transferase, C-terminal domain APT61_RS02220 PF01327 Polypeptide deformylase APT61_RS02225 PF17782 DprA winged helix domain APT61_RS02225 PF02481 DNA recombination-mediator protein A APT61_RS02230 PF04361 Protein of unknown function (DUF494) APT61_RS02240 PF01300 Telomere recombination APT61_RS02245 PF18317 Shikimate 5'-dehydrogenase C-terminal domain APT61_RS02245 PF01488 Shikimate / quinate 5-dehydrogenase APT61_RS02245 PF08501 Shikimate dehydrogenase substrate binding domain APT61_RS02250 PF07369 Protein of unknown function (DUF1488) APT61_RS02255 PF00132 Bacterial transferase hexapeptide (six repeats) APT61_RS02295 PF00005 ABC transporter APT61_RS02300 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS02305 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS02310 PF00497 Bacterial extracellular solute-binding proteins, family 3 APT61_RS02320 PF00873 AcrB/AcrD/AcrF family APT61_RS02325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APT61_RS02325 PF00529 HlyD membrane-fusion protein of T1SS APT61_RS02330 PF08361 MAATS-type transcriptional repressor, C-terminal region APT61_RS02330 PF00440 Bacterial regulatory proteins, tetR family APT61_RS02335 PF03707 Bacterial signalling protein N terminal repeat APT61_RS02335 PF00563 EAL domain APT61_RS02335 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS02340 PF02954 Bacterial regulatory protein, Fis family APT61_RS02345 PF01207 Dihydrouridine synthase (Dus) APT61_RS02350 PF00194 Eukaryotic-type carbonic anhydrase APT61_RS02360 PF00474 Sodium:solute symporter family APT61_RS02365 PF06196 Protein of unknown function (DUF997) APT61_RS02370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APT61_RS02370 PF00289 Biotin carboxylase, N-terminal domain APT61_RS02370 PF02785 Biotin carboxylase C-terminal domain APT61_RS02375 PF00364 Biotin-requiring enzyme APT61_RS02380 PF01220 Dehydroquinase class II APT61_RS02385 PF01794 Ferric reductase like transmembrane component APT61_RS02390 PF00174 Oxidoreductase molybdopterin binding domain APT61_RS02395 PF00107 Zinc-binding dehydrogenase APT61_RS02395 PF08240 Alcohol dehydrogenase GroES-like domain APT61_RS02400 PF17157 Gammaproteobacterial periplasmic sensor domain APT61_RS02400 PF00563 EAL domain APT61_RS02400 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS02410 PF04085 rod shape-determining protein MreC APT61_RS02415 PF04093 rod shape-determining protein MreD APT61_RS02420 PF02545 Maf-like protein APT61_RS02425 PF10150 Ribonuclease E/G family APT61_RS02425 PF00575 S1 RNA binding domain APT61_RS02430 PF13502 AsmA-like C-terminal region APT61_RS02430 PF13116 Protein of unknown function APT61_RS02435 PF01523 Putative modulator of DNA gyrase APT61_RS02440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS02440 PF03466 LysR substrate binding domain APT61_RS02445 PF13533 Biotin-lipoyl like APT61_RS02450 PF04632 Fusaric acid resistance protein family APT61_RS02455 PF00171 Aldehyde dehydrogenase family APT61_RS02460 PF01337 Barstar (barnase inhibitor) APT61_RS02465 PF07338 Protein of unknown function (DUF1471) APT61_RS02470 PF07338 Protein of unknown function (DUF1471) APT61_RS02475 PF02863 Arginine repressor, C-terminal domain APT61_RS02475 PF01316 Arginine repressor, DNA binding domain APT61_RS02480 PF00056 lactate/malate dehydrogenase, NAD binding domain APT61_RS02480 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain APT61_RS02485 PF13180 PDZ domain APT61_RS02490 PF00595 PDZ domain APT61_RS02490 PF13180 PDZ domain APT61_RS02495 PF06295 Protein of unknown function (DUF1043) APT61_RS02500 PF03969 AFG1-like ATPase APT61_RS02505 PF00572 Ribosomal protein L13 APT61_RS02510 PF00380 Ribosomal protein S9/S16 APT61_RS02515 PF00043 Glutathione S-transferase, C-terminal domain APT61_RS02515 PF02798 Glutathione S-transferase, N-terminal domain APT61_RS02520 PF04386 Stringent starvation protein B APT61_RS02525 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain APT61_RS02530 PF13954 PapC N-terminal domain APT61_RS02530 PF00577 Outer membrane usher protein APT61_RS02530 PF13953 PapC C-terminal domain APT61_RS02540 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster APT61_RS02540 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT61_RS02545 PF04898 Glutamate synthase central domain APT61_RS02545 PF01493 GXGXG motif APT61_RS02545 PF00310 Glutamine amidotransferases class-II APT61_RS02545 PF01645 Conserved region in glutamate synthase APT61_RS02555 PF16199 Radical_SAM C-terminal domain APT61_RS02555 PF04055 Radical SAM superfamily APT61_RS02560 PF05872 Bacterial protein of unknown function (DUF853) APT61_RS02565 PF02733 Dak1 domain APT61_RS02565 PF02734 DAK2 domain APT61_RS02570 PF08240 Alcohol dehydrogenase GroES-like domain APT61_RS02570 PF00107 Zinc-binding dehydrogenase APT61_RS02575 PF00583 Acetyltransferase (GNAT) family APT61_RS02580 PF08264 Anticodon-binding domain of tRNA APT61_RS02580 PF10458 Valyl tRNA synthetase tRNA binding arm APT61_RS02580 PF00133 tRNA synthetases class I (I, L, M and V) APT61_RS02585 PF04364 DNA polymerase III chi subunit, HolC APT61_RS02590 PF00883 Cytosol aminopeptidase family, catalytic domain APT61_RS02590 PF02789 Cytosol aminopeptidase family, N-terminal domain APT61_RS02595 PF03739 Lipopolysaccharide export system permease LptF/LptG APT61_RS02600 PF03739 Lipopolysaccharide export system permease LptF/LptG APT61_RS02605 PF00512 His Kinase A (phospho-acceptor) domain APT61_RS02605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS02605 PF01627 Hpt domain APT61_RS02605 PF18415 Histidine kinase receptor ArcB trans-membrane domain APT61_RS02605 PF00072 Response regulator receiver domain APT61_RS02605 PF00989 PAS fold APT61_RS02615 PF00912 Transglycosylase APT61_RS02620 PF00381 PTS HPr component phosphorylation site APT61_RS02625 PF03668 P-loop ATPase protein family APT61_RS02630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APT61_RS02635 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein APT61_RS02640 PF04552 Sigma-54, DNA binding domain APT61_RS02640 PF04963 Sigma-54 factor, core binding domain APT61_RS02640 PF00309 Sigma-54 factor, Activator interacting domain (AID) APT61_RS02645 PF00005 ABC transporter APT61_RS02645 PF12399 Branched-chain amino acid ATP-binding cassette transporter APT61_RS02650 PF03968 OstA-like protein APT61_RS02655 PF06835 Lipopolysaccharide-assembly, LptC-related APT61_RS02665 PF01380 SIS domain APT61_RS02665 PF00571 CBS domain APT61_RS02670 PF01699 Sodium/calcium exchanger protein APT61_RS02675 PF00005 ABC transporter APT61_RS02680 PF02405 Permease MlaE APT61_RS02685 PF02470 MlaD protein APT61_RS02690 PF05494 MlaC protein APT61_RS02695 PF13466 STAS domain APT61_RS02700 PF01722 BolA-like protein APT61_RS02705 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APT61_RS02710 PF13693 Winged helix-turn-helix DNA-binding APT61_RS02715 PF00348 Polyprenyl synthetase APT61_RS02720 PF00829 Ribosomal prokaryotic L21 protein APT61_RS02725 PF01016 Ribosomal L27 protein APT61_RS02730 PF00892 EamA-like transporter family APT61_RS02735 PF01926 50S ribosome-binding GTPase APT61_RS02735 PF01018 GTP1/OBG APT61_RS02740 PF00512 His Kinase A (phospho-acceptor) domain APT61_RS02740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS02740 PF00672 HAMP domain APT61_RS02745 PF00486 Transcriptional regulatory protein, C terminal APT61_RS02745 PF00072 Response regulator receiver domain APT61_RS02750 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family APT61_RS02755 PF01272 Transcription elongation factor, GreA/GreB, C-term APT61_RS02755 PF03449 Transcription elongation factor, N-terminal APT61_RS02760 PF01985 CRS1 / YhbY (CRM) domain APT61_RS02765 PF01728 FtsJ-like methyltransferase APT61_RS02770 PF00004 ATPase family associated with various cellular activities (AAA) APT61_RS02770 PF17862 AAA+ lid domain APT61_RS02770 PF01434 Peptidase family M41 APT61_RS02770 PF06480 FtsH Extracellular APT61_RS02775 PF00809 Pterin binding enzyme APT61_RS02780 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APT61_RS02780 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APT61_RS02780 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APT61_RS02780 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APT61_RS02785 PF03840 Preprotein translocase SecG subunit APT61_RS02795 PF00764 Arginosuccinate synthase APT61_RS02805 PF17384 RimP C-terminal SH3 domain APT61_RS02805 PF02576 RimP N-terminal domain APT61_RS02810 PF00575 S1 RNA binding domain APT61_RS02810 PF13184 NusA-like KH domain APT61_RS02810 PF08529 NusA N-terminal domain APT61_RS02815 PF11987 Translation-initiation factor 2 APT61_RS02815 PF00009 Elongation factor Tu GTP binding domain APT61_RS02815 PF04760 Translation initiation factor IF-2, N-terminal region APT61_RS02815 PF08364 Bacterial translation initiation factor IF-2 associated region APT61_RS02820 PF02033 Ribosome-binding factor A APT61_RS02825 PF09157 Pseudouridine synthase II TruB, C-terminal APT61_RS02825 PF16198 tRNA pseudouridylate synthase B C-terminal domain APT61_RS02825 PF01509 TruB family pseudouridylate synthase (N terminal domain) APT61_RS02830 PF00312 Ribosomal protein S15 APT61_RS02835 PF01138 3' exoribonuclease family, domain 1 APT61_RS02835 PF03725 3' exoribonuclease family, domain 2 APT61_RS02835 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain APT61_RS02835 PF00575 S1 RNA binding domain APT61_RS02835 PF00013 KH domain APT61_RS02840 PF07719 Tetratricopeptide repeat APT61_RS02840 PF13181 Tetratricopeptide repeat APT61_RS02845 PF03880 DbpA RNA binding domain APT61_RS02845 PF00270 DEAD/DEAH box helicase APT61_RS02845 PF00271 Helicase conserved C-terminal domain APT61_RS02845 PF12343 Cold shock protein DEAD box A APT61_RS02850 PF03222 Tryptophan/tyrosine permease family APT61_RS02855 PF00296 Luciferase-like monooxygenase APT61_RS02860 PF01136 Peptidase family U32 APT61_RS02865 PF01136 Peptidase family U32 APT61_RS02870 PF02036 SCP-2 sterol transfer family APT61_RS02875 PF13508 Acetyltransferase (GNAT) domain APT61_RS02880 PF01541 GIY-YIG catalytic domain APT61_RS02890 PF01965 DJ-1/PfpI family APT61_RS02895 PF13460 NAD(P)H-binding APT61_RS02900 PF04972 BON domain APT61_RS02905 PF13580 SIS domain APT61_RS02910 PF02021 Uncharacterised protein family UPF0102 APT61_RS02915 PF04348 LppC putative lipoprotein APT61_RS02920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APT61_RS02925 PF08666 SAF domain APT61_RS02925 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus APT61_RS02930 PF07690 Major Facilitator Superfamily APT61_RS02935 PF03328 HpcH/HpaI aldolase/citrate lyase family APT61_RS02940 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase APT61_RS02940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APT61_RS02945 PF02595 Glycerate kinase family APT61_RS02955 PF03515 Colicin-like bacteriocin tRNase domain APT61_RS02955 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 APT61_RS02955 PF09000 Cytotoxic APT61_RS02965 PF03466 LysR substrate binding domain APT61_RS02965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS02970 PF00291 Pyridoxal-phosphate dependent enzyme APT61_RS02975 PF03222 Tryptophan/tyrosine permease family APT61_RS02980 PF00871 Acetokinase family APT61_RS02985 PF01228 Glycine radical APT61_RS02985 PF02901 Pyruvate formate lyase-like APT61_RS02995 PF03313 Serine dehydratase alpha chain APT61_RS03000 PF17954 Quercetinase C-terminal cupin domain APT61_RS03000 PF02678 Pirin APT61_RS03005 PF03466 LysR substrate binding domain APT61_RS03005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS03010 PF05656 Protein of unknown function (DUF805) APT61_RS03015 PF13409 Glutathione S-transferase, N-terminal domain APT61_RS03020 PF07681 DoxX APT61_RS03025 PF13997 YqjK-like protein APT61_RS03030 PF07332 Putative Actinobacterial Holin-X, holin superfamily III APT61_RS03035 PF05957 Bacterial protein of unknown function (DUF883) APT61_RS03040 PF06476 Protein of unknown function (DUF1090) APT61_RS03045 PF13721 SecD export protein N-terminal TM region APT61_RS03050 PF09335 SNARE associated Golgi protein APT61_RS03055 PF00392 Bacterial regulatory proteins, gntR family APT61_RS03055 PF07729 FCD domain APT61_RS03060 PF07690 Major Facilitator Superfamily APT61_RS03065 PF02614 Glucuronate isomerase APT61_RS03070 PF08666 SAF domain APT61_RS03070 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus APT61_RS03075 PF00375 Sodium:dicarboxylate symporter family APT61_RS03080 PF03741 Integral membrane protein TerC family APT61_RS03085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APT61_RS03090 PF01863 Protein of unknown function DUF45 APT61_RS03095 PF05175 Methyltransferase small domain APT61_RS03100 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT61_RS03100 PF00724 NADH:flavin oxidoreductase / NADH oxidase family APT61_RS03105 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APT61_RS03105 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APT61_RS03110 PF04198 Putative sugar-binding domain APT61_RS03115 PF00005 ABC transporter APT61_RS03120 PF02653 Branched-chain amino acid transport system / permease component APT61_RS03125 PF02653 Branched-chain amino acid transport system / permease component APT61_RS03130 PF13407 Periplasmic binding protein domain APT61_RS03135 PF01791 DeoC/LacD family aldolase APT61_RS03140 PF03992 Antibiotic biosynthesis monooxygenase APT61_RS03145 PF00202 Aminotransferase class-III APT61_RS03150 PF08447 PAS fold APT61_RS03150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APT61_RS03155 PF00672 HAMP domain APT61_RS03155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APT61_RS03155 PF02203 Tar ligand binding domain homologue APT61_RS03160 PF03551 Transcriptional regulator PadR-like family APT61_RS03165 PF04954 Siderophore-interacting protein APT61_RS03165 PF08021 Siderophore-interacting FAD-binding domain APT61_RS03185 PF06564 Cellulose biosynthesis protein BcsQ APT61_RS03190 PF03170 Bacterial cellulose synthase subunit APT61_RS03190 PF03552 Cellulose synthase APT61_RS03190 PF00535 Glycosyl transferase family 2 APT61_RS03190 PF07238 PilZ domain APT61_RS03195 PF03170 Bacterial cellulose synthase subunit APT61_RS03200 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) APT61_RS03200 PF13181 Tetratricopeptide repeat APT61_RS03210 PF01270 Glycosyl hydrolases family 8 APT61_RS03225 PF00589 Phage integrase family APT61_RS03235 PF16452 Bacteriophage CI repressor C-terminal domain APT61_RS03235 PF07022 Bacteriophage CI repressor helix-turn-helix domain APT61_RS03245 PF06892 Phage regulatory protein CII (CP76) APT61_RS03250 PF17282 Family of unknown function (DUF5347) APT61_RS03265 PF02086 D12 class N6 adenine-specific DNA methyltransferase APT61_RS03270 PF05840 Bacteriophage replication gene A protein (GPA) APT61_RS03280 PF06183 DinI-like family APT61_RS03385 PF08400 Prophage tail fibre N-terminal APT61_RS03385 PF03335 Phage tail fibre repeat APT61_RS03385 PF07484 Phage Tail Collar Domain APT61_RS03395 PF04984 Phage tail sheath protein subtilisin-like domain APT61_RS03395 PF17482 Phage tail sheath C-terminal domain APT61_RS03435 PF03167 Uracil DNA glycosylase superfamily APT61_RS03440 PF03979 Sigma-70 factor, region 1.1 APT61_RS03440 PF04546 Sigma-70, non-essential region APT61_RS03440 PF04545 Sigma-70, region 4 APT61_RS03440 PF00140 Sigma-70 factor, region 1.2 APT61_RS03440 PF04539 Sigma-70 region 3 APT61_RS03440 PF04542 Sigma-70 region 2 APT61_RS03445 PF10410 DnaB-helicase binding domain of primase APT61_RS03445 PF01807 CHC2 zinc finger APT61_RS03445 PF08275 DNA primase catalytic core, N-terminal domain APT61_RS03445 PF08278 DNA primase DnaG DnaB-binding APT61_RS03450 PF01165 Ribosomal protein S21 APT61_RS03455 PF00814 Glycoprotease family APT61_RS03465 PF02492 CobW/HypB/UreG, nucleotide-binding domain APT61_RS03470 PF01730 UreF APT61_RS03480 PF02814 UreE urease accessory protein, N-terminal domain APT61_RS03480 PF05194 UreE urease accessory protein, C-terminal domain APT61_RS03485 PF00449 Urease alpha-subunit, N-terminal domain APT61_RS03485 PF01979 Amidohydrolase family APT61_RS03490 PF00699 Urease beta subunit APT61_RS03495 PF00547 Urease, gamma subunit APT61_RS03500 PF01774 UreD urease accessory protein APT61_RS03505 PF00083 Sugar (and other) transporter APT61_RS03510 PF02660 Glycerol-3-phosphate acyltransferase APT61_RS03515 PF02152 Dihydroneopterin aldolase APT61_RS03520 PF02673 Bacitracin resistance protein BacA APT61_RS03525 PF12627 Probable RNA and SrmB- binding site of polymerase A APT61_RS03525 PF01966 HD domain APT61_RS03525 PF01743 Poly A polymerase head domain APT61_RS03530 PF08239 Bacterial SH3 domain APT61_RS03535 PF01928 CYTH domain APT61_RS03540 PF08335 GlnD PII-uridylyltransferase APT61_RS03540 PF03710 Glutamate-ammonia ligase adenylyltransferase APT61_RS03545 PF01467 Cytidylyltransferase-like APT61_RS03545 PF00294 pfkB family carbohydrate kinase APT61_RS03550 PF04380 Membrane fusogenic activity APT61_RS03555 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase APT61_RS03565 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain APT61_RS03565 PF02753 Pili assembly chaperone PapD, C-terminal domain APT61_RS03570 PF13954 PapC N-terminal domain APT61_RS03570 PF13953 PapC C-terminal domain APT61_RS03570 PF00577 Outer membrane usher protein APT61_RS03575 PF00419 Fimbrial protein APT61_RS03580 PF02535 ZIP Zinc transporter APT61_RS03585 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase APT61_RS03590 PF03738 Glutathionylspermidine synthase preATP-grasp APT61_RS03595 PF06693 Protein of unknown function (DUF1190) APT61_RS03600 PF02321 Outer membrane efflux protein APT61_RS03605 PF00293 NUDIX domain APT61_RS03610 PF06853 Protein of unknown function (DUF1249) APT61_RS03615 PF00149 Calcineurin-like phosphoesterase APT61_RS03620 PF05728 Uncharacterised protein family (UPF0227) APT61_RS03625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS03625 PF00986 DNA gyrase B subunit, carboxyl terminus APT61_RS03625 PF00204 DNA gyrase B APT61_RS03625 PF01751 Toprim domain APT61_RS03630 PF12833 Helix-turn-helix domain APT61_RS03630 PF02311 AraC-like ligand binding domain APT61_RS03640 PF01306 LacY proton/sugar symporter APT61_RS03645 PF07470 Glycosyl Hydrolase Family 88 APT61_RS03655 PF01476 LysM domain APT61_RS03655 PF04972 BON domain APT61_RS03660 PF03992 Antibiotic biosynthesis monooxygenase APT61_RS03665 PF02525 Flavodoxin-like fold APT61_RS03670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS03670 PF00512 His Kinase A (phospho-acceptor) domain APT61_RS03670 PF08521 Two-component sensor kinase N-terminal APT61_RS03675 PF00072 Response regulator receiver domain APT61_RS03675 PF00486 Transcriptional regulatory protein, C terminal APT61_RS03680 PF04076 Bacterial OB fold (BOF) protein APT61_RS03685 PF00521 DNA gyrase/topoisomerase IV, subunit A APT61_RS03685 PF03989 DNA gyrase C-terminal domain, beta-propeller APT61_RS03690 PF01553 Acyltransferase APT61_RS03695 PF07731 Multicopper oxidase APT61_RS03695 PF00394 Multicopper oxidase APT61_RS03695 PF07732 Multicopper oxidase APT61_RS03700 PF08497 Radical SAM N-terminal APT61_RS03700 PF11842 Domain of unknown function (DUF3362) APT61_RS03700 PF04055 Radical SAM superfamily APT61_RS03710 PF00248 Aldo/keto reductase family APT61_RS03715 PF00465 Iron-containing alcohol dehydrogenase APT61_RS03725 PF09335 SNARE associated Golgi protein APT61_RS03730 PF01053 Cys/Met metabolism PLP-dependent enzyme APT61_RS03740 PF01618 MotA/TolQ/ExbB proton channel family APT61_RS03745 PF02472 Biopolymer transport protein ExbD/TolR APT61_RS03770 PF03350 Uncharacterized protein family, UPF0114 APT61_RS03775 PF00248 Aldo/keto reductase family APT61_RS03780 PF01738 Dienelactone hydrolase family APT61_RS03790 PF00672 HAMP domain APT61_RS03790 PF02203 Tar ligand binding domain homologue APT61_RS03790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APT61_RS03795 PF00455 DeoR C terminal sensor domain APT61_RS03795 PF08220 DeoR-like helix-turn-helix domain APT61_RS03800 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS03800 PF08448 PAS fold APT61_RS03805 PF01497 Periplasmic binding protein APT61_RS03815 PF02798 Glutathione S-transferase, N-terminal domain APT61_RS03820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APT61_RS03825 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS03830 PF12911 N-terminal TM domain of oligopeptide transport permease C APT61_RS03830 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS03835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APT61_RS03835 PF00005 ABC transporter APT61_RS03840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APT61_RS03840 PF00005 ABC transporter APT61_RS03845 PF09997 Predicted membrane protein (DUF2238) APT61_RS03850 PF03797 Autotransporter beta-domain APT61_RS03850 PF12334 Rickettsia outer membrane protein B APT61_RS03860 PF07702 UTRA domain APT61_RS03860 PF00392 Bacterial regulatory proteins, gntR family APT61_RS03865 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APT61_RS03865 PF13378 Enolase C-terminal domain-like APT61_RS03870 PF00367 phosphotransferase system, EIIB APT61_RS03870 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 APT61_RS03870 PF02378 Phosphotransferase system, EIIC APT61_RS03905 PF04474 Protein of unknown function (DUF554) APT61_RS03910 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain APT61_RS03910 PF01276 Orn/Lys/Arg decarboxylase, major domain APT61_RS03910 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain APT61_RS03915 PF03825 Nucleoside H+ symporter APT61_RS03920 PF01464 Transglycosylase SLT domain APT61_RS03920 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain APT61_RS03925 PF04362 Bacterial Fe(2+) trafficking APT61_RS03930 PF10576 Iron-sulfur binding domain of endonuclease III APT61_RS03930 PF00730 HhH-GPD superfamily base excision DNA repair protein APT61_RS03930 PF14815 NUDIX domain APT61_RS03930 PF00633 Helix-hairpin-helix motif APT61_RS03935 PF02390 Putative methyltransferase APT61_RS03940 PF04320 Protein with unknown function (DUF469) APT61_RS03945 PF11101 Protein of unknown function (DUF2884) APT61_RS03950 PF04480 Protein of unknown function (DUF559) APT61_RS03955 PF04055 Radical SAM superfamily APT61_RS03955 PF06969 HemN C-terminal domain APT61_RS03960 PF01725 Ham1 family APT61_RS03965 PF02594 Uncharacterised ACR, YggU family COG1872 APT61_RS03970 PF02325 YGGT family APT61_RS03975 PF01168 Alanine racemase, N-terminal domain APT61_RS03980 PF00437 Type II/IV secretion system protein APT61_RS03990 PF03652 Holliday junction resolvase APT61_RS03995 PF02622 Uncharacterized ACR, COG1678 APT61_RS04000 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain APT61_RS04000 PF02951 Prokaryotic glutathione synthetase, N-terminal domain APT61_RS04005 PF04452 RNA methyltransferase APT61_RS04010 PF04231 Endonuclease I APT61_RS04015 PF10263 SprT-like family APT61_RS04015 PF17283 SprT-like zinc ribbon domain APT61_RS04020 PF00083 Sugar (and other) transporter APT61_RS04025 PF02772 S-adenosylmethionine synthetase, central domain APT61_RS04025 PF02773 S-adenosylmethionine synthetase, C-terminal domain APT61_RS04025 PF00438 S-adenosylmethionine synthetase, N-terminal domain APT61_RS04030 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain APT61_RS04030 PF17944 Arginine decarboxylase C-terminal helical extension APT61_RS04030 PF17810 Arginine decarboxylase helical bundle domain APT61_RS04035 PF00491 Arginase family APT61_RS04040 PF01435 Peptidase family M48 APT61_RS04045 PF00456 Transketolase, thiamine diphosphate binding domain APT61_RS04045 PF02780 Transketolase, C-terminal domain APT61_RS04045 PF02779 Transketolase, pyrimidine binding domain APT61_RS04050 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain APT61_RS04050 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APT61_RS04055 PF00162 Phosphoglycerate kinase APT61_RS04060 PF01116 Fructose-bisphosphate aldolase class-II APT61_RS04065 PF00924 Mechanosensitive ion channel APT61_RS04065 PF05552 Conserved TM helix APT61_RS04070 PF01810 LysE type translocator APT61_RS04075 PF04402 Protein of unknown function (DUF541) APT61_RS04080 PF03466 LysR substrate binding domain APT61_RS04080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS04085 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) APT61_RS04090 PF01842 ACT domain APT61_RS04090 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APT61_RS04090 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APT61_RS04095 PF01812 5-formyltetrahydrofolate cyclo-ligase family APT61_RS04105 PF05164 Cell division protein ZapA APT61_RS04110 PF03695 Uncharacterised protein family (UPF0149) APT61_RS04115 PF00557 Metallopeptidase family M24 APT61_RS04115 PF05195 Aminopeptidase P, N-terminal domain APT61_RS04120 PF01494 FAD binding domain APT61_RS04125 PF01494 FAD binding domain APT61_RS04135 PF01571 Aminomethyltransferase folate-binding domain APT61_RS04135 PF08669 Glycine cleavage T-protein C-terminal barrel domain APT61_RS04140 PF01597 Glycine cleavage H-protein APT61_RS04145 PF02347 Glycine cleavage system P-protein APT61_RS04155 PF00232 Glycosyl hydrolase family 1 APT61_RS04160 PF01418 Helix-turn-helix domain, rpiR family APT61_RS04160 PF01380 SIS domain APT61_RS04165 PF04266 ASCH domain APT61_RS04170 PF03006 Haemolysin-III related APT61_RS04175 PF01571 Aminomethyltransferase folate-binding domain APT61_RS04180 PF03937 Flavinator of succinate dehydrogenase APT61_RS04185 PF07254 Membrane-bound toxin component of toxin-antitoxin system APT61_RS04190 PF00258 Flavodoxin APT61_RS04195 PF02899 Phage integrase, N-terminal SAM-like domain APT61_RS04195 PF00589 Phage integrase family APT61_RS04200 PF13098 Thioredoxin-like domain APT61_RS04200 PF10411 Disulfide bond isomerase protein N-terminus APT61_RS04205 PF17768 RecJ OB domain APT61_RS04205 PF02272 DHHA1 domain APT61_RS04205 PF01368 DHH family APT61_RS04210 PF00472 RF-1 domain APT61_RS04210 PF03462 PCRF domain APT61_RS04215 PF00152 tRNA synthetases class II (D, K and N) APT61_RS04215 PF01336 OB-fold nucleic acid binding domain APT61_RS04220 PF00293 NUDIX domain APT61_RS04225 PF01476 LysM domain APT61_RS04225 PF01551 Peptidase family M23 APT61_RS04240 PF06902 Divergent 4Fe-4S mono-cluster APT61_RS04245 PF14542 GCN5-related N-acetyl-transferase APT61_RS04250 PF03222 Tryptophan/tyrosine permease family APT61_RS04260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS04260 PF03466 LysR substrate binding domain APT61_RS04270 PF00497 Bacterial extracellular solute-binding proteins, family 3 APT61_RS04275 PF01546 Peptidase family M20/M25/M40 APT61_RS04275 PF07687 Peptidase dimerisation domain APT61_RS04280 PF00108 Thiolase, N-terminal domain APT61_RS04280 PF02803 Thiolase, C-terminal domain APT61_RS04290 PF06178 Oligogalacturonate-specific porin protein (KdgM) APT61_RS04295 PF14583 Oligogalacturonate lyase APT61_RS04300 PF04962 KduI/IolB family APT61_RS04310 PF00083 Sugar (and other) transporter APT61_RS04315 PF14583 Oligogalacturonate lyase APT61_RS04325 PF00005 ABC transporter APT61_RS04325 PF17912 MalK OB fold domain APT61_RS04325 PF03459 TOBE domain APT61_RS04330 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS04335 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS04345 PF01177 Asp/Glu/Hydantoin racemase APT61_RS04350 PF03466 LysR substrate binding domain APT61_RS04350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS04355 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain APT61_RS04355 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain APT61_RS04360 PF00356 Bacterial regulatory proteins, lacI family APT61_RS04365 PF02378 Phosphotransferase system, EIIC APT61_RS04370 PF00232 Glycosyl hydrolase family 1 APT61_RS04375 PF07729 FCD domain APT61_RS04375 PF00392 Bacterial regulatory proteins, gntR family APT61_RS04385 PF00356 Bacterial regulatory proteins, lacI family APT61_RS04390 PF01553 Acyltransferase APT61_RS04390 PF00501 AMP-binding enzyme APT61_RS04395 PF07690 Major Facilitator Superfamily APT61_RS04400 PF00248 Aldo/keto reductase family APT61_RS04405 PF06004 Bacterial protein of unknown function (DUF903) APT61_RS04410 PF02976 DNA mismatch repair enzyme MutH APT61_RS04415 PF00293 NUDIX domain APT61_RS04420 PF05524 PEP-utilising enzyme, N-terminal APT61_RS04420 PF01590 GAF domain APT61_RS04420 PF02896 PEP-utilising enzyme, TIM barrel domain APT61_RS04420 PF00391 PEP-utilising enzyme, mobile domain APT61_RS04425 PF01790 Prolipoprotein diacylglyceryl transferase APT61_RS04430 PF00303 Thymidylate synthase APT61_RS04435 PF07963 Prokaryotic N-terminal methylation motif APT61_RS04440 PF07963 Prokaryotic N-terminal methylation motif APT61_RS04445 PF10713 Protein of unknown function (DUF2509) APT61_RS04450 PF12528 Type II secretion prepilin peptidase dependent protein C APT61_RS04450 PF07963 Prokaryotic N-terminal methylation motif APT61_RS04455 PF17946 RecC C-terminal domain APT61_RS04460 PF05193 Peptidase M16 inactive domain APT61_RS04460 PF00675 Insulinase (Peptidase family M16) APT61_RS04460 PF16187 Middle or third domain of peptidase_M16 APT61_RS04465 PF12705 PD-(D/E)XK nuclease superfamily APT61_RS04465 PF00580 UvrD/REP helicase N-terminal domain APT61_RS04465 PF13361 UvrD-like helicase C-terminal domain APT61_RS04470 PF13538 UvrD-like helicase C-terminal domain APT61_RS04475 PF00696 Amino acid kinase family APT61_RS04475 PF00583 Acetyltransferase (GNAT) family APT61_RS04480 PF01520 N-acetylmuramoyl-L-alanine amidase APT61_RS04480 PF11741 AMIN domain APT61_RS04500 PF06725 3D domain APT61_RS04500 PF03562 MltA specific insert domain APT61_RS04505 PF00899 ThiF family APT61_RS04510 PF02657 Fe-S metabolism associated domain APT61_RS04515 PF00266 Aminotransferase class-V APT61_RS04520 PF06004 Bacterial protein of unknown function (DUF903) APT61_RS04525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS04525 PF03466 LysR substrate binding domain APT61_RS04530 PF04241 Protein of unknown function (DUF423) APT61_RS04535 PF18125 RlmM ferredoxin-like domain APT61_RS04535 PF01728 FtsJ-like methyltransferase APT61_RS04540 PF01367 5'-3' exonuclease, C-terminal SAM fold APT61_RS04540 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain APT61_RS04545 PF03315 Serine dehydratase beta chain APT61_RS04545 PF03313 Serine dehydratase alpha chain APT61_RS04555 PF03641 Possible lysine decarboxylase APT61_RS04555 PF11892 Domain of unknown function (DUF3412) APT61_RS04555 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases APT61_RS04560 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term APT61_RS04560 PF14489 QueF-like protein APT61_RS04565 PF07348 Syd protein (SUKH-2) APT61_RS04575 PF04287 tRNA pseudouridine synthase C APT61_RS04580 PF00849 RNA pseudouridylate synthase APT61_RS04585 PF00258 Flavodoxin APT61_RS04590 PF07690 Major Facilitator Superfamily APT61_RS04595 PF13378 Enolase C-terminal domain-like APT61_RS04595 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APT61_RS04600 PF13378 Enolase C-terminal domain-like APT61_RS04605 PF02595 Glycerate kinase family APT61_RS04615 PF05958 tRNA (Uracil-5-)-methyltransferase APT61_RS04615 PF01938 TRAM domain APT61_RS04620 PF13291 ACT domain APT61_RS04620 PF04607 Region found in RelA / SpoT proteins APT61_RS04620 PF02824 TGS domain APT61_RS04625 PF03819 MazG nucleotide pyrophosphohydrolase domain APT61_RS04630 PF00117 Glutamine amidotransferase class-I APT61_RS04630 PF06418 CTP synthase N-terminus APT61_RS04635 PF00113 Enolase, C-terminal TIM barrel domain APT61_RS04635 PF03952 Enolase, N-terminal domain APT61_RS04640 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase APT61_RS04645 PF04055 Radical SAM superfamily APT61_RS04650 PF01242 6-pyruvoyl tetrahydropterin synthase APT61_RS04655 PF00175 Oxidoreductase NAD-binding domain APT61_RS04655 PF00258 Flavodoxin APT61_RS04655 PF00667 FAD binding domain APT61_RS04660 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APT61_RS04660 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APT61_RS04665 PF01507 Phosphoadenosine phosphosulfate reductase family APT61_RS04685 PF04389 Peptidase family M28 APT61_RS04690 PF14824 Sirohaem biosynthesis protein central APT61_RS04690 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APT61_RS04690 PF10414 Sirohaem synthase dimerisation region APT61_RS04695 PF01507 Phosphoadenosine phosphosulfate reductase family APT61_RS04700 PF00009 Elongation factor Tu GTP binding domain APT61_RS04710 PF12084 Protein of unknown function (DUF3561) APT61_RS04715 PF04977 Septum formation initiator APT61_RS04720 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase APT61_RS04725 PF02542 YgbB family APT61_RS04730 PF01142 tRNA pseudouridine synthase D (TruD) APT61_RS04735 PF01975 Survival protein SurE APT61_RS04745 PF01551 Peptidase family M23 APT61_RS04745 PF01476 LysM domain APT61_RS04750 PF04545 Sigma-70, region 4 APT61_RS04750 PF04539 Sigma-70 region 3 APT61_RS04750 PF00140 Sigma-70 factor, region 1.2 APT61_RS04750 PF04542 Sigma-70 region 2 APT61_RS04760 PF00488 MutS domain V APT61_RS04760 PF05190 MutS family domain IV APT61_RS04760 PF05192 MutS domain III APT61_RS04760 PF01624 MutS domain I APT61_RS04760 PF05188 MutS domain II APT61_RS04765 PF08845 Toxin SymE, type I toxin-antitoxin system APT61_RS04770 PF11756 Nitrous oxide-stimulated promoter APT61_RS04775 PF07690 Major Facilitator Superfamily APT61_RS04780 PF00005 ABC transporter APT61_RS04785 PF01032 FecCD transport family APT61_RS04795 PF00232 Glycosyl hydrolase family 1 APT61_RS04800 PF02378 Phosphotransferase system, EIIC APT61_RS04800 PF00367 phosphotransferase system, EIIB APT61_RS04805 PF00356 Bacterial regulatory proteins, lacI family APT61_RS04815 PF02378 Phosphotransferase system, EIIC APT61_RS04815 PF00367 phosphotransferase system, EIIB APT61_RS04815 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 APT61_RS04820 PF18113 Rubredoxin binding C-terminal domain APT61_RS04820 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT61_RS04825 PF00753 Metallo-beta-lactamase superfamily APT61_RS04825 PF00258 Flavodoxin APT61_RS04825 PF00301 Rubredoxin APT61_RS04830 PF00158 Sigma-54 interaction domain APT61_RS04830 PF01590 GAF domain APT61_RS04835 PF00571 CBS domain APT61_RS04835 PF01380 SIS domain APT61_RS04840 PF00455 DeoR C terminal sensor domain APT61_RS04840 PF08220 DeoR-like helix-turn-helix domain APT61_RS04845 PF13406 Transglycosylase SLT domain APT61_RS04850 PF02464 Competence-damaged protein APT61_RS04855 PF00154 recA bacterial DNA recombination protein APT61_RS04860 PF02631 RecX family APT61_RS04865 PF01411 tRNA synthetases class II (A) APT61_RS04865 PF02272 DHHA1 domain APT61_RS04865 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APT61_RS04870 PF02599 Global regulator protein family APT61_RS04900 PF13419 Haloacid dehalogenase-like hydrolase APT61_RS04905 PF09335 SNARE associated Golgi protein APT61_RS04910 PF04262 Glutamate-cysteine ligase APT61_RS04915 PF02664 S-Ribosylhomocysteinase (LuxS) APT61_RS04920 PF07690 Major Facilitator Superfamily APT61_RS04925 PF00529 HlyD membrane-fusion protein of T1SS APT61_RS04925 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APT61_RS04930 PF01047 MarR family APT61_RS04935 PF07690 Major Facilitator Superfamily APT61_RS04940 PF04069 Substrate binding domain of ABC-type glycine betaine transport system APT61_RS04945 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS04950 PF00571 CBS domain APT61_RS04950 PF00005 ABC transporter APT61_RS04955 PF01590 GAF domain APT61_RS04955 PF02954 Bacterial regulatory protein, Fis family APT61_RS04955 PF00158 Sigma-54 interaction domain APT61_RS04960 PF02769 AIR synthase related protein, C-terminal domain APT61_RS04960 PF00586 AIR synthase related protein, N-terminal domain APT61_RS04965 PF01924 Hydrogenase formation hypA family APT61_RS04970 PF01455 HupF/HypC family APT61_RS04975 PF02492 CobW/HypB/UreG, nucleotide-binding domain APT61_RS04980 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA APT61_RS04985 PF11046 Transcriptional repressor of hyc and hyp operons APT61_RS04990 PF13247 4Fe-4S dicluster domain APT61_RS04995 PF00361 Proton-conducting membrane transporter APT61_RS05000 PF00146 NADH dehydrogenase APT61_RS05005 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit APT61_RS05005 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit APT61_RS05005 PF00374 Nickel-dependent hydrogenase APT61_RS05010 PF12838 4Fe-4S dicluster domain APT61_RS05015 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit APT61_RS05020 PF07450 Formate hydrogenlyase maturation protein HycH APT61_RS05025 PF01750 Hydrogenase maturation protease APT61_RS05035 PF02463 RecF/RecN/SMC N terminal domain APT61_RS05055 PF13247 4Fe-4S dicluster domain APT61_RS05055 PF12800 4Fe-4S binding domain APT61_RS05060 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APT61_RS05060 PF00384 Molybdopterin oxidoreductase APT61_RS05060 PF01568 Molydopterin dinucleotide binding domain APT61_RS05065 PF07503 HypF finger APT61_RS05065 PF00708 Acylphosphatase APT61_RS05065 PF01300 Telomere recombination APT61_RS05065 PF17788 HypF Kae1-like domain APT61_RS05070 PF03824 High-affinity nickel-transport protein APT61_RS05075 PF00384 Molybdopterin oxidoreductase APT61_RS05075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APT61_RS05075 PF01568 Molydopterin dinucleotide binding domain APT61_RS05080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APT61_RS05080 PF00384 Molybdopterin oxidoreductase APT61_RS05080 PF01568 Molydopterin dinucleotide binding domain APT61_RS05085 PF00313 'Cold-shock' DNA-binding domain APT61_RS05090 PF01810 LysE type translocator APT61_RS05095 PF00268 Ribonucleotide reductase, small chain APT61_RS05100 PF08343 Ribonucleotide reductase N-terminal APT61_RS05100 PF00317 Ribonucleotide reductase, all-alpha domain APT61_RS05100 PF02867 Ribonucleotide reductase, barrel domain APT61_RS05105 PF07972 NrdI Flavodoxin like APT61_RS05110 PF00462 Glutaredoxin APT61_RS05115 PF05957 Bacterial protein of unknown function (DUF883) APT61_RS05120 PF09400 Protein of unknown function (DUF2002) APT61_RS05125 PF06610 L-alanine exporter APT61_RS05130 PF00816 H-NS histone family APT61_RS05140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS05140 PF03466 LysR substrate binding domain APT61_RS05145 PF12796 Ankyrin repeats (3 copies) APT61_RS05150 PF02629 CoA binding domain APT61_RS05150 PF00549 CoA-ligase APT61_RS05155 PF06545 Protein of unknown function (DUF1116) APT61_RS05165 PF00696 Amino acid kinase family APT61_RS05170 PF07969 Amidohydrolase family APT61_RS05175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS05175 PF03466 LysR substrate binding domain APT61_RS05180 PF07690 Major Facilitator Superfamily APT61_RS05190 PF00456 Transketolase, thiamine diphosphate binding domain APT61_RS05195 PF02780 Transketolase, C-terminal domain APT61_RS05195 PF02779 Transketolase, pyrimidine binding domain APT61_RS05205 PF03466 LysR substrate binding domain APT61_RS05205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS05210 PF06316 Enterobacterial Ail/Lom protein APT61_RS05240 PF04829 Pre-toxin domain with VENN motif APT61_RS05240 PF05594 Haemagluttinin repeat APT61_RS05240 PF13332 Hemagglutinin repeat APT61_RS05250 PF13332 Hemagglutinin repeat APT61_RS05250 PF04829 Pre-toxin domain with VENN motif APT61_RS05250 PF05860 haemagglutination activity domain APT61_RS05300 PF13018 Extended Signal Peptide of Type V secretion system APT61_RS05300 PF05860 haemagglutination activity domain APT61_RS05300 PF04829 Pre-toxin domain with VENN motif APT61_RS05300 PF13332 Hemagglutinin repeat APT61_RS05305 PF02794 RTX toxin acyltransferase family APT61_RS05310 PF17287 POTRA domain APT61_RS05310 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB APT61_RS05310 PF08479 POTRA domain, ShlB-type APT61_RS05315 PF04076 Bacterial OB fold (BOF) protein APT61_RS05325 PF04239 Protein of unknown function (DUF421) APT61_RS05330 PF02464 Competence-damaged protein APT61_RS05335 PF00106 short chain dehydrogenase APT61_RS05340 PF02322 Cytochrome bd terminal oxidase subunit II APT61_RS05345 PF01654 Cytochrome bd terminal oxidase subunit I APT61_RS05350 PF05067 Manganese containing catalase APT61_RS05355 PF05974 Domain of unknown function (DUF892) APT61_RS05360 PF05974 Domain of unknown function (DUF892) APT61_RS05365 PF10685 Stress-induced bacterial acidophilic repeat motif APT61_RS05375 PF00849 RNA pseudouridylate synthase APT61_RS05390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS05390 PF03466 LysR substrate binding domain APT61_RS05410 PF00529 HlyD membrane-fusion protein of T1SS APT61_RS05410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APT61_RS05415 PF00005 ABC transporter APT61_RS05415 PF00664 ABC transporter transmembrane region APT61_RS05415 PF03412 Peptidase C39 family APT61_RS05440 PF00392 Bacterial regulatory proteins, gntR family APT61_RS05440 PF07729 FCD domain APT61_RS05445 PF00701 Dihydrodipicolinate synthetase family APT61_RS05450 PF07690 Major Facilitator Superfamily APT61_RS05455 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase APT61_RS05460 PF00480 ROK family APT61_RS05465 PF04074 YhcH/YjgK/YiaL APT61_RS05475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS05475 PF03466 LysR substrate binding domain APT61_RS05480 PF00107 Zinc-binding dehydrogenase APT61_RS05480 PF08240 Alcohol dehydrogenase GroES-like domain APT61_RS05490 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A APT61_RS05525 PF13356 Arm DNA-binding domain APT61_RS05525 PF00589 Phage integrase family APT61_RS05535 PF01668 SmpB protein APT61_RS05540 PF03364 Polyketide cyclase / dehydrase and lipid transport APT61_RS05545 PF03658 RnfH family Ubiquitin APT61_RS05550 PF04355 SmpA / OmlA family APT61_RS05555 PF02463 RecF/RecN/SMC N terminal domain APT61_RS05560 PF01513 ATP-NAD kinase APT61_RS05565 PF01025 GrpE APT61_RS05570 PF00571 CBS domain APT61_RS05570 PF03471 Transporter associated domain APT61_RS05570 PF01595 Cyclin M transmembrane N-terminal domain APT61_RS05575 PF01578 Cytochrome C assembly protein APT61_RS05580 PF02978 Signal peptide binding domain APT61_RS05580 PF02881 SRP54-type protein, helical bundle domain APT61_RS05580 PF00448 SRP54-type protein, GTPase domain APT61_RS05585 PF00886 Ribosomal protein S16 APT61_RS05590 PF01782 RimM N-terminal domain APT61_RS05590 PF05239 PRC-barrel domain APT61_RS05595 PF01746 tRNA (Guanine-1)-methyltransferase APT61_RS05600 PF01245 Ribosomal protein L19 APT61_RS05615 PF00691 OmpA family APT61_RS05620 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS05620 PF17152 Periplasmic sensor domain APT61_RS05625 PF10973 Protein of unknown function (DUF2799) APT61_RS05630 PF00793 DAHP synthetase I family APT61_RS05635 PF02153 Prephenate dehydrogenase APT61_RS05635 PF01817 Chorismate mutase type II APT61_RS05640 PF08450 SMP-30/Gluconolactonase/LRE-like region APT61_RS05645 PF01817 Chorismate mutase type II APT61_RS05645 PF00800 Prephenate dehydratase APT61_RS05650 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein APT61_RS05655 PF13525 Outer membrane lipoprotein APT61_RS05660 PF01479 S4 domain APT61_RS05660 PF00849 RNA pseudouridylate synthase APT61_RS05665 PF02578 Multi-copper polyphenol oxidoreductase laccase APT61_RS05670 PF07724 AAA domain (Cdc48 subfamily) APT61_RS05670 PF17871 AAA lid domain APT61_RS05670 PF10431 C-terminal, D2-small domain, of ClpB protein APT61_RS05670 PF02861 Clp amino terminal domain, pathogenicity island component APT61_RS05670 PF00004 ATPase family associated with various cellular activities (AAA) APT61_RS05705 PF00083 Sugar (and other) transporter APT61_RS05710 PF10043 Predicted periplasmic lipoprotein (DUF2279) APT61_RS05715 PF13091 PLD-like domain APT61_RS05720 PF13607 Succinyl-CoA ligase like flavodoxin domain APT61_RS05720 PF13380 CoA binding domain APT61_RS05720 PF00583 Acetyltransferase (GNAT) family APT61_RS05725 PF03942 DTW domain APT61_RS05730 PF00085 Thioredoxin APT61_RS05735 PF08032 RNA 2'-O ribose methyltransferase substrate binding APT61_RS05735 PF00588 SpoU rRNA Methylase family APT61_RS05740 PF03167 Uracil DNA glycosylase superfamily APT61_RS05745 PF01228 Glycine radical APT61_RS05750 PF00271 Helicase conserved C-terminal domain APT61_RS05750 PF00270 DEAD/DEAH box helicase APT61_RS05755 PF05175 Methyltransferase small domain APT61_RS05760 PF02910 Fumarate reductase flavoprotein C-term APT61_RS05760 PF00890 FAD binding domain APT61_RS05765 PF08281 Sigma-70, region 4 APT61_RS05765 PF04542 Sigma-70 region 2 APT61_RS05770 PF03873 Anti sigma-E protein RseA, C-terminal domain APT61_RS05770 PF03872 Anti sigma-E protein RseA, N-terminal domain APT61_RS05775 PF17188 MucB/RseB C-terminal domain APT61_RS05775 PF03888 MucB/RseB N-terminal domain APT61_RS05785 PF00679 Elongation factor G C-terminus APT61_RS05785 PF00009 Elongation factor Tu GTP binding domain APT61_RS05785 PF03144 Elongation factor Tu domain 2 APT61_RS05785 PF06421 GTP-binding protein LepA C-terminus APT61_RS05790 PF10502 Signal peptidase, peptidase S26 APT61_RS05795 PF00035 Double-stranded RNA binding motif APT61_RS05795 PF14622 Ribonuclease-III-like APT61_RS05800 PF01926 50S ribosome-binding GTPase APT61_RS05800 PF07650 KH domain APT61_RS05805 PF02565 Recombination protein O C terminal APT61_RS05805 PF11967 Recombination protein O N terminal APT61_RS05810 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ APT61_RS05815 PF01648 4'-phosphopantetheinyl transferase superfamily APT61_RS05820 PF12838 4Fe-4S dicluster domain APT61_RS05825 PF01418 Helix-turn-helix domain, rpiR family APT61_RS05825 PF01380 SIS domain APT61_RS05830 PF01380 SIS domain APT61_RS05835 PF00367 phosphotransferase system, EIIB APT61_RS05835 PF02378 Phosphotransferase system, EIIC APT61_RS05845 PF01464 Transglycosylase SLT domain APT61_RS05845 PF00497 Bacterial extracellular solute-binding proteins, family 3 APT61_RS05850 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal APT61_RS05850 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain APT61_RS05850 PF02769 AIR synthase related protein, C-terminal domain APT61_RS05855 PF00512 His Kinase A (phospho-acceptor) domain APT61_RS05855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS05860 PF13942 YfhG lipoprotein APT61_RS05865 PF00158 Sigma-54 interaction domain APT61_RS05865 PF00072 Response regulator receiver domain APT61_RS05870 PF00543 Nitrogen regulatory protein P-II APT61_RS05875 PF00970 Oxidoreductase FAD-binding domain APT61_RS05875 PF00042 Globin APT61_RS05875 PF00175 Oxidoreductase NAD-binding domain APT61_RS05880 PF00464 Serine hydroxymethyltransferase APT61_RS05885 PF07681 DoxX APT61_RS05890 PF12832 MFS_1 like family APT61_RS05895 PF00874 PRD domain APT61_RS05900 PF06226 Protein of unknown function (DUF1007) APT61_RS05905 PF03824 High-affinity nickel-transport protein APT61_RS05910 PF00459 Inositol monophosphatase family APT61_RS05915 PF00588 SpoU rRNA Methylase family APT61_RS05920 PF02082 Transcriptional regulator APT61_RS05925 PF00266 Aminotransferase class-V APT61_RS05930 PF01592 NifU-like N terminal domain APT61_RS05935 PF01521 Iron-sulphur cluster biosynthesis APT61_RS05940 PF07743 HSCB C-terminal oligomerisation domain APT61_RS05945 PF00012 Hsp70 protein APT61_RS05950 PF00111 2Fe-2S iron-sulfur cluster binding domain APT61_RS05955 PF04384 Iron-sulphur cluster assembly APT61_RS05960 PF00883 Cytosol aminopeptidase family, catalytic domain APT61_RS05960 PF12404 Peptidase APT61_RS05965 PF07179 SseB protein N-terminal domain APT61_RS05965 PF14581 SseB protein C-terminal domain APT61_RS05970 PF01380 SIS domain APT61_RS05970 PF01418 Helix-turn-helix domain, rpiR family APT61_RS05975 PF00581 Rhodanese-like domain APT61_RS05980 PF02056 Family 4 glycosyl hydrolase APT61_RS05980 PF11975 Family 4 glycosyl hydrolase C-terminal domain APT61_RS05985 PF02378 Phosphotransferase system, EIIC APT61_RS05985 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 APT61_RS05985 PF00367 phosphotransferase system, EIIB APT61_RS05990 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain APT61_RS05990 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain APT61_RS05990 PF11974 Bacterial alpha-2-macroglobulin MG3 domain APT61_RS05990 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain APT61_RS05990 PF07703 Alpha-2-macroglobulin bait region domain APT61_RS05990 PF17962 Bacterial macroglobulin domain 6 APT61_RS05990 PF01835 MG2 domain APT61_RS05990 PF07678 A-macroglobulin TED domain APT61_RS05990 PF00207 Alpha-2-macroglobulin family APT61_RS05995 PF00905 Penicillin binding protein transpeptidase domain APT61_RS05995 PF00912 Transglycosylase APT61_RS05995 PF06832 Penicillin-Binding Protein C-terminus Family APT61_RS06000 PF00334 Nucleoside diphosphate kinase APT61_RS06005 PF04055 Radical SAM superfamily APT61_RS06010 PF13464 Domain of unknown function (DUF4115) APT61_RS06015 PF04551 GcpE protein APT61_RS06020 PF03129 Anticodon binding domain APT61_RS06020 PF13393 Histidyl-tRNA synthetase APT61_RS06025 PF09976 Tetratricopeptide repeat-like domain APT61_RS06030 PF13360 PQQ-like domain APT61_RS06035 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal APT61_RS06035 PF01926 50S ribosome-binding GTPase APT61_RS06040 PF00854 POT family APT61_RS06050 PF07191 zinc-ribbons APT61_RS06060 PF01447 Thermolysin metallopeptidase, catalytic domain APT61_RS06060 PF16485 Protealysin propeptide APT61_RS06060 PF02868 Thermolysin metallopeptidase, alpha-helical domain APT61_RS06070 PF02601 Exonuclease VII, large subunit APT61_RS06070 PF13742 OB-fold nucleic acid binding domain APT61_RS06075 PF00571 CBS domain APT61_RS06075 PF00478 IMP dehydrogenase / GMP reductase domain APT61_RS06080 PF00958 GMP synthase C terminal domain APT61_RS06080 PF02540 NAD synthase APT61_RS06080 PF00117 Glutamine amidotransferase class-I APT61_RS06110 PF03466 LysR substrate binding domain APT61_RS06110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS06115 PF11119 Protein of unknown function (DUF2633) APT61_RS06120 PF00563 EAL domain APT61_RS06120 PF05231 MASE1 APT61_RS06125 PF02541 Ppx/GppA phosphatase family APT61_RS06130 PF13089 Polyphosphate kinase N-terminal domain APT61_RS06130 PF13090 Polyphosphate kinase C-terminal domain 2 APT61_RS06130 PF17941 Polyphosphate kinase C-terminal domain 1 APT61_RS06130 PF02503 Polyphosphate kinase middle domain APT61_RS06135 PF00551 Formyl transferase APT61_RS06140 PF00586 AIR synthase related protein, N-terminal domain APT61_RS06140 PF02769 AIR synthase related protein, C-terminal domain APT61_RS06145 PF00232 Glycosyl hydrolase family 1 APT61_RS06155 PF00860 Permease family APT61_RS06160 PF00308 Bacterial dnaA protein APT61_RS06165 PF03960 ArsC family APT61_RS06170 PF01435 Peptidase family M48 APT61_RS06175 PF01594 AI-2E family transporter APT61_RS06180 PF00578 AhpC/TSA family APT61_RS06185 PF01842 ACT domain APT61_RS06190 PF00701 Dihydrodipicolinate synthetase family APT61_RS06195 PF06804 NlpB/DapX lipoprotein APT61_RS06200 PF01259 SAICAR synthetase APT61_RS06205 PF04228 Putative neutral zinc metallopeptidase APT61_RS06210 PF13718 GNAT acetyltransferase 2 APT61_RS06210 PF17176 tRNA-binding domain APT61_RS06210 PF05127 Helicase APT61_RS06210 PF08351 Domain of unknown function (DUF1726) APT61_RS06215 PF02230 Phospholipase/Carboxylesterase APT61_RS06220 PF13980 Uncharacterised protein family (UPF0370) APT61_RS06225 PF01546 Peptidase family M20/M25/M40 APT61_RS06225 PF07687 Peptidase dimerisation domain APT61_RS06230 PF03960 ArsC family APT61_RS06235 PF00873 AcrB/AcrD/AcrF family APT61_RS06240 PF07730 Histidine kinase APT61_RS06240 PF00672 HAMP domain APT61_RS06240 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term APT61_RS06240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS06245 PF13247 4Fe-4S dicluster domain APT61_RS06245 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster APT61_RS06245 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT61_RS06250 PF00293 NUDIX domain APT61_RS06255 PF06674 Protein of unknown function (DUF1176) APT61_RS06260 PF00456 Transketolase, thiamine diphosphate binding domain APT61_RS06260 PF02779 Transketolase, pyrimidine binding domain APT61_RS06260 PF02780 Transketolase, C-terminal domain APT61_RS06265 PF00923 Transaldolase/Fructose-6-phosphate aldolase APT61_RS06270 PF03949 Malic enzyme, NAD binding domain APT61_RS06270 PF01515 Phosphate acetyl/butaryl transferase APT61_RS06270 PF00390 Malic enzyme, N-terminal domain APT61_RS06275 PF01218 Coproporphyrinogen III oxidase APT61_RS06280 PF01520 N-acetylmuramoyl-L-alanine amidase APT61_RS06285 PF00583 Acetyltransferase (GNAT) family APT61_RS06290 PF11143 Protein of unknown function (DUF2919) APT61_RS06295 PF06572 Protein of unknown function (DUF1131) APT61_RS06300 PF04261 Dyp-type peroxidase family APT61_RS06310 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS06315 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS06320 PF00005 ABC transporter APT61_RS06325 PF00291 Pyridoxal-phosphate dependent enzyme APT61_RS06330 PF08543 Phosphomethylpyrimidine kinase APT61_RS06335 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 APT61_RS06340 PF05524 PEP-utilising enzyme, N-terminal APT61_RS06340 PF00391 PEP-utilising enzyme, mobile domain APT61_RS06340 PF02896 PEP-utilising enzyme, TIM barrel domain APT61_RS06345 PF00381 PTS HPr component phosphorylation site APT61_RS06350 PF00291 Pyridoxal-phosphate dependent enzyme APT61_RS06360 PF04354 ZipA, C-terminal FtsZ-binding domain APT61_RS06365 PF00533 BRCA1 C Terminus (BRCT) domain APT61_RS06365 PF01653 NAD-dependent DNA ligase adenylation domain APT61_RS06365 PF03120 NAD-dependent DNA ligase OB-fold domain APT61_RS06365 PF03119 NAD-dependent DNA ligase C4 zinc finger domain APT61_RS06365 PF12826 Helix-hairpin-helix motif APT61_RS06370 PF12843 Putative quorum-sensing-regulated virulence factor APT61_RS06375 PF13593 SBF-like CPA transporter family (DUF4137) APT61_RS06380 PF03466 LysR substrate binding domain APT61_RS06380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS06415 PF00749 tRNA synthetases class I (E and Q), catalytic domain APT61_RS06420 PF07037 Putative transcription regulator (DUF1323) APT61_RS06425 PF07037 Putative transcription regulator (DUF1323) APT61_RS06440 PF05231 MASE1 APT61_RS06440 PF00563 EAL domain APT61_RS06445 PF07662 Na+ dependent nucleoside transporter C-terminus APT61_RS06445 PF01773 Na+ dependent nucleoside transporter N-terminus APT61_RS06445 PF07670 Nucleoside recognition APT61_RS06450 PF01566 Natural resistance-associated macrophage protein APT61_RS06455 PF10697 Protein of unknown function (DUF2502) APT61_RS06460 PF00248 Aldo/keto reductase family APT61_RS06465 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APT61_RS06465 PF00205 Thiamine pyrophosphate enzyme, central domain APT61_RS06465 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APT61_RS06470 PF00654 Voltage gated chloride channel APT61_RS06475 PF02685 Glucokinase APT61_RS06480 PF00072 Response regulator receiver domain APT61_RS06480 PF04397 LytTr DNA-binding domain APT61_RS06485 PF07694 5TMR of 5TMR-LYT APT61_RS06485 PF06580 Histidine kinase APT61_RS06485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS06490 PF00155 Aminotransferase class I and II APT61_RS06500 PF03279 Bacterial lipid A biosynthesis acyltransferase APT61_RS06515 PF08245 Mur ligase middle domain APT61_RS06515 PF01225 Mur ligase family, catalytic domain APT61_RS06515 PF02875 Mur ligase family, glutamate ligase domain APT61_RS06535 PF00563 EAL domain APT61_RS06535 PF03707 Bacterial signalling protein N terminal repeat APT61_RS06535 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS06535 PF13188 PAS domain APT61_RS06555 PF00664 ABC transporter transmembrane region APT61_RS06555 PF00005 ABC transporter APT61_RS06555 PF03412 Peptidase C39 family APT61_RS06560 PF00529 HlyD membrane-fusion protein of T1SS APT61_RS06565 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) APT61_RS06585 PF01226 Formate/nitrite transporter APT61_RS06590 PF04333 MlaA lipoprotein APT61_RS06595 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) APT61_RS06600 PF04175 Protein of unknown function (DUF406) APT61_RS06605 PF02803 Thiolase, C-terminal domain APT61_RS06605 PF00108 Thiolase, N-terminal domain APT61_RS06610 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain APT61_RS06610 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain APT61_RS06610 PF00378 Enoyl-CoA hydratase/isomerase APT61_RS06615 PF00300 Histidine phosphatase superfamily (branch 1) APT61_RS06620 PF01713 Smr domain APT61_RS06625 PF05175 Methyltransferase small domain APT61_RS06630 PF01264 Chorismate synthase APT61_RS06635 PF03411 Penicillin-insensitive murein endopeptidase APT61_RS06640 PF01925 Sulfite exporter TauE/SafE APT61_RS06645 PF04315 Elongation factor P hydroxylase APT61_RS06650 PF08891 YfcL protein APT61_RS06655 PF05430 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS06655 PF01266 FAD dependent oxidoreductase APT61_RS06660 PF02801 Beta-ketoacyl synthase, C-terminal domain APT61_RS06660 PF00109 Beta-ketoacyl synthase, N-terminal domain APT61_RS06665 PF07690 Major Facilitator Superfamily APT61_RS06675 PF11890 Domain of unknown function (DUF3410) APT61_RS06675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APT61_RS06675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APT61_RS06680 PF02774 Semialdehyde dehydrogenase, dimerisation domain APT61_RS06680 PF01118 Semialdehyde dehydrogenase, NAD binding domain APT61_RS06685 PF01416 tRNA pseudouridine synthase APT61_RS06690 PF09335 SNARE associated Golgi protein APT61_RS06695 PF01039 Carboxyl transferase domain APT61_RS06695 PF17848 Acetyl-coA carboxylase zinc finger domain APT61_RS06700 PF02875 Mur ligase family, glutamate ligase domain APT61_RS06700 PF08245 Mur ligase middle domain APT61_RS06705 PF05036 Sporulation related domain APT61_RS06710 PF02674 Colicin V production protein APT61_RS06715 PF00156 Phosphoribosyl transferase domain APT61_RS06720 PF02441 Flavoprotein APT61_RS06725 PF00497 Bacterial extracellular solute-binding proteins, family 3 APT61_RS06730 PF00497 Bacterial extracellular solute-binding proteins, family 3 APT61_RS06735 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS06740 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS06745 PF00005 ABC transporter APT61_RS06750 PF13302 Acetyltransferase (GNAT) domain APT61_RS06755 PF08338 Domain of unknown function (DUF1731) APT61_RS06755 PF01370 NAD dependent epimerase/dehydratase family APT61_RS06760 PF02152 Dihydroneopterin aldolase APT61_RS06765 PF02798 Glutathione S-transferase, N-terminal domain APT61_RS06765 PF00043 Glutathione S-transferase, C-terminal domain APT61_RS06770 PF02798 Glutathione S-transferase, N-terminal domain APT61_RS06770 PF14834 Glutathione S-transferase, C-terminal domain APT61_RS06775 PF12850 Calcineurin-like phosphoesterase superfamily domain APT61_RS06780 PF00293 NUDIX domain APT61_RS06785 PF07085 DRTGG domain APT61_RS06785 PF01515 Phosphate acetyl/butaryl transferase APT61_RS06790 PF00871 Acetokinase family APT61_RS06795 PF04217 Protein of unknown function, DUF412 APT61_RS06800 PF03887 YfbU domain APT61_RS06805 PF13419 Haloacid dehalogenase-like hydrolase APT61_RS06810 PF03600 Citrate transporter APT61_RS06810 PF02080 TrkA-C domain APT61_RS06820 PF00155 Aminotransferase class I and II APT61_RS06825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS06825 PF03466 LysR substrate binding domain APT61_RS06830 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 APT61_RS06835 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit APT61_RS06840 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit APT61_RS06840 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit APT61_RS06850 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region APT61_RS06850 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit APT61_RS06850 PF10531 SLBB domain APT61_RS06855 PF01568 Molydopterin dinucleotide binding domain APT61_RS06855 PF00384 Molybdopterin oxidoreductase APT61_RS06855 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APT61_RS06855 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region APT61_RS06860 PF00146 NADH dehydrogenase APT61_RS06865 PF12838 4Fe-4S dicluster domain APT61_RS06870 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 APT61_RS06875 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L APT61_RS06880 PF00361 Proton-conducting membrane transporter APT61_RS06880 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus APT61_RS06885 PF00361 Proton-conducting membrane transporter APT61_RS06890 PF00361 Proton-conducting membrane transporter APT61_RS06895 PF01584 CheW-like domain APT61_RS06895 PF00072 Response regulator receiver domain APT61_RS06900 PF12706 Beta-lactamase superfamily domain APT61_RS06905 PF13673 Acetyltransferase (GNAT) domain APT61_RS06910 PF05957 Bacterial protein of unknown function (DUF883) APT61_RS06915 PF00425 chorismate binding enzyme APT61_RS06920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APT61_RS06920 PF16582 Middle domain of thiamine pyrophosphate APT61_RS06920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APT61_RS06925 PF12697 Alpha/beta hydrolase family APT61_RS06930 PF00378 Enoyl-CoA hydratase/isomerase APT61_RS06935 PF13378 Enolase C-terminal domain-like APT61_RS06940 PF00501 AMP-binding enzyme APT61_RS06940 PF13193 AMP-binding enzyme C-terminal domain APT61_RS06945 PF07437 YfaZ precursor APT61_RS06950 PF00994 Probable molybdopterin binding domain APT61_RS06955 PF13183 4Fe-4S dicluster domain APT61_RS06955 PF02754 Cysteine-rich domain APT61_RS06960 PF00890 FAD binding domain APT61_RS06965 PF04324 BFD-like [2Fe-2S] binding domain APT61_RS06965 PF01266 FAD dependent oxidoreductase APT61_RS06970 PF07690 Major Facilitator Superfamily APT61_RS06975 PF03009 Glycerophosphoryl diester phosphodiesterase family APT61_RS06980 PF00111 2Fe-2S iron-sulfur cluster binding domain APT61_RS06985 PF00268 Ribonucleotide reductase, small chain APT61_RS06990 PF00317 Ribonucleotide reductase, all-alpha domain APT61_RS06990 PF02867 Ribonucleotide reductase, barrel domain APT61_RS06990 PF03477 ATP cone domain APT61_RS07000 PF00521 DNA gyrase/topoisomerase IV, subunit A APT61_RS07000 PF03989 DNA gyrase C-terminal domain, beta-propeller APT61_RS07005 PF00072 Response regulator receiver domain APT61_RS07005 PF09456 RcsC Alpha-Beta-Loop (ABL) APT61_RS07005 PF00512 His Kinase A (phospho-acceptor) domain APT61_RS07005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS07010 PF00196 Bacterial regulatory proteins, luxR family APT61_RS07010 PF00072 Response regulator receiver domain APT61_RS07015 PF01627 Hpt domain APT61_RS07015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS07015 PF16359 RcsD-ABL domain APT61_RS07020 PF00267 Gram-negative porin APT61_RS07025 PF02424 ApbE family APT61_RS07030 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain APT61_RS07030 PF12833 Helix-turn-helix domain APT61_RS07030 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain APT61_RS07030 PF02805 Metal binding domain of Ada APT61_RS07035 PF13532 2OG-Fe(II) oxygenase superfamily APT61_RS07040 PF00005 ABC transporter APT61_RS07045 PF00571 CBS domain APT61_RS07045 PF03448 MgtE intracellular N domain APT61_RS07045 PF01769 Divalent cation transporter APT61_RS07050 PF01740 STAS domain APT61_RS07050 PF00916 Sulfate permease family APT61_RS07055 PF06039 Malate:quinone oxidoreductase (Mqo) APT61_RS07060 PF03974 Ecotin APT61_RS07065 PF10749 Protein of unknown function (DUF2534) APT61_RS07085 PF11893 Domain of unknown function (DUF3413) APT61_RS07085 PF00884 Sulfatase APT61_RS07090 PF07208 Protein of unknown function (DUF1414) APT61_RS07095 PF04245 37-kD nucleoid-associated bacterial protein APT61_RS07100 PF01386 Ribosomal L25p family APT61_RS07105 PF00271 Helicase conserved C-terminal domain APT61_RS07105 PF04851 Type III restriction enzyme, res subunit APT61_RS07110 PF01479 S4 domain APT61_RS07110 PF00849 RNA pseudouridylate synthase APT61_RS07115 PF07690 Major Facilitator Superfamily APT61_RS07120 PF13989 YejG-like protein APT61_RS07125 PF00005 ABC transporter APT61_RS07125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APT61_RS07130 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS07130 PF12911 N-terminal TM domain of oligopeptide transport permease C APT61_RS07135 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS07145 PF12792 CSS motif domain associated with EAL APT61_RS07145 PF00563 EAL domain APT61_RS07150 PF00877 NlpC/P60 family APT61_RS07155 PF01569 PAP2 superfamily APT61_RS07160 PF07683 Cobalamin synthesis protein cobW C-terminal domain APT61_RS07160 PF02492 CobW/HypB/UreG, nucleotide-binding domain APT61_RS07165 PF01232 Mannitol dehydrogenase Rossmann domain APT61_RS07165 PF08125 Mannitol dehydrogenase C-terminal domain APT61_RS07170 PF03786 D-mannonate dehydratase (UxuA) APT61_RS07175 PF09285 Elongation factor P, C-terminal APT61_RS07175 PF08207 Elongation factor P (EF-P) KOW-like domain APT61_RS07175 PF01132 Elongation factor P (EF-P) OB domain APT61_RS07180 PF03692 Putative zinc- or iron-chelating domain APT61_RS07185 PF07690 Major Facilitator Superfamily APT61_RS07190 PF00381 PTS HPr component phosphorylation site APT61_RS07190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APT61_RS07195 PF00294 pfkB family carbohydrate kinase APT61_RS07200 PF02378 Phosphotransferase system, EIIC APT61_RS07200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APT61_RS07210 PF01261 Xylose isomerase-like TIM barrel APT61_RS07215 PF03601 Conserved hypothetical protein 698 APT61_RS07220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS07220 PF03466 LysR substrate binding domain APT61_RS07225 PF00324 Amino acid permease APT61_RS07230 PF00593 TonB dependent receptor APT61_RS07230 PF07715 TonB-dependent Receptor Plug Domain APT61_RS07235 PF00756 Putative esterase APT61_RS07240 PF06779 Uncharacterised MFS-type transporter YbfB APT61_RS07245 PF01227 GTP cyclohydrolase I APT61_RS07250 PF04235 Protein of unknown function (DUF418) APT61_RS07255 PF00356 Bacterial regulatory proteins, lacI family APT61_RS07260 PF13407 Periplasmic binding protein domain APT61_RS07265 PF00005 ABC transporter APT61_RS07270 PF02653 Branched-chain amino acid transport system / permease component APT61_RS07275 PF02698 DUF218 domain APT61_RS07280 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region APT61_RS07280 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region APT61_RS07285 PF04172 LrgB-like family APT61_RS07290 PF03788 LrgA family APT61_RS07300 PF00557 Metallopeptidase family M24 APT61_RS07305 PF01207 Dihydrouridine synthase (Dus) APT61_RS07310 PF03123 CAT RNA binding domain APT61_RS07310 PF00874 PRD domain APT61_RS07315 PF00367 phosphotransferase system, EIIB APT61_RS07315 PF02378 Phosphotransferase system, EIIC APT61_RS07315 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 APT61_RS07320 PF00232 Glycosyl hydrolase family 1 APT61_RS07325 PF02321 Outer membrane efflux protein APT61_RS07335 PF09335 SNARE associated Golgi protein APT61_RS07345 PF04893 Yip1 domain APT61_RS07350 PF00768 D-alanyl-D-alanine carboxypeptidase APT61_RS07360 PF09330 D-lactate dehydrogenase, membrane binding APT61_RS07360 PF01565 FAD binding domain APT61_RS07365 PF14310 Fibronectin type III-like domain APT61_RS07365 PF01915 Glycosyl hydrolase family 3 C-terminal domain APT61_RS07365 PF00933 Glycosyl hydrolase family 3 N terminal domain APT61_RS07370 PF04069 Substrate binding domain of ABC-type glycine betaine transport system APT61_RS07375 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS07380 PF00005 ABC transporter APT61_RS07385 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS07390 PF13411 MerR HTH family regulatory protein APT61_RS07395 PF07694 5TMR of 5TMR-LYT APT61_RS07395 PF06580 Histidine kinase APT61_RS07400 PF00072 Response regulator receiver domain APT61_RS07400 PF04397 LytTr DNA-binding domain APT61_RS07405 PF07308 Protein of unknown function (DUF1456) APT61_RS07410 PF01588 Putative tRNA binding domain APT61_RS07410 PF09334 tRNA synthetases class I (M) APT61_RS07415 PF10609 NUBPL iron-transfer P-loop NTPase APT61_RS07420 PF11776 Nickel/cobalt transporter regulator APT61_RS07425 PF10531 SLBB domain APT61_RS07425 PF18412 Outer-membrane lipoprotein Wza C-terminal domain APT61_RS07425 PF02563 Polysaccharide biosynthesis/export protein APT61_RS07430 PF01451 Low molecular weight phosphotyrosine protein phosphatase APT61_RS07435 PF13614 AAA domain APT61_RS07435 PF02706 Chain length determinant protein APT61_RS07435 PF13807 G-rich domain on putative tyrosine kinase APT61_RS07440 PF00282 Pyridoxal-dependent decarboxylase conserved domain APT61_RS07445 PF00202 Aminotransferase class-III APT61_RS07455 PF02110 Hydroxyethylthiazole kinase family APT61_RS07460 PF08543 Phosphomethylpyrimidine kinase APT61_RS07465 PF01791 DeoC/LacD family aldolase APT61_RS07475 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APT61_RS07475 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APT61_RS07480 PF00106 short chain dehydrogenase APT61_RS07485 PF00356 Bacterial regulatory proteins, lacI family APT61_RS07490 PF04198 Putative sugar-binding domain APT61_RS07495 PF08125 Mannitol dehydrogenase C-terminal domain APT61_RS07495 PF01232 Mannitol dehydrogenase Rossmann domain APT61_RS07500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APT61_RS07500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APT61_RS07505 PF07690 Major Facilitator Superfamily APT61_RS07510 PF13378 Enolase C-terminal domain-like APT61_RS07510 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APT61_RS07515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APT61_RS07520 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS07525 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS07525 PF12911 N-terminal TM domain of oligopeptide transport permease C APT61_RS07530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APT61_RS07530 PF00005 ABC transporter APT61_RS07535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APT61_RS07535 PF00005 ABC transporter APT61_RS07540 PF00781 Diacylglycerol kinase catalytic domain APT61_RS07550 PF01136 Peptidase family U32 APT61_RS07550 PF16325 Peptidase family U32 C-terminal domain APT61_RS07565 PF10798 Biofilm development protein YmgB/AriR APT61_RS07575 PF10798 Biofilm development protein YmgB/AriR APT61_RS07580 PF04940 Sensors of blue-light using FAD APT61_RS07580 PF00563 EAL domain APT61_RS07585 PF13411 MerR HTH family regulatory protein APT61_RS07590 PF00072 Response regulator receiver domain APT61_RS07590 PF00486 Transcriptional regulatory protein, C terminal APT61_RS07595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS07595 PF00512 His Kinase A (phospho-acceptor) domain APT61_RS07595 PF00672 HAMP domain APT61_RS07600 PF07690 Major Facilitator Superfamily APT61_RS07605 PF00873 AcrB/AcrD/AcrF family APT61_RS07610 PF00873 AcrB/AcrD/AcrF family APT61_RS07615 PF13533 Biotin-lipoyl like APT61_RS07620 PF00012 Hsp70 protein APT61_RS07625 PF00730 HhH-GPD superfamily base excision DNA repair protein APT61_RS07625 PF06029 AlkA N-terminal domain APT61_RS07630 PF00563 EAL domain APT61_RS07630 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS07630 PF05231 MASE1 APT61_RS07630 PF08447 PAS fold APT61_RS07630 PF08448 PAS fold APT61_RS07630 PF13426 PAS domain APT61_RS07635 PF00485 Phosphoribulokinase / Uridine kinase family APT61_RS07640 PF00692 dUTPase APT61_RS07645 PF05170 AsmA family APT61_RS07650 PF00571 CBS domain APT61_RS07650 PF03741 Integral membrane protein TerC family APT61_RS07650 PF03471 Transporter associated domain APT61_RS07655 PF02563 Polysaccharide biosynthesis/export protein APT61_RS07655 PF10531 SLBB domain APT61_RS07655 PF18412 Outer-membrane lipoprotein Wza C-terminal domain APT61_RS07660 PF01451 Low molecular weight phosphotyrosine protein phosphatase APT61_RS07665 PF13807 G-rich domain on putative tyrosine kinase APT61_RS07665 PF02706 Chain length determinant protein APT61_RS07665 PF13614 AAA domain APT61_RS07670 PF00535 Glycosyl transferase family 2 APT61_RS07675 PF00132 Bacterial transferase hexapeptide (six repeats) APT61_RS07680 PF13439 Glycosyltransferase Family 4 APT61_RS07680 PF00534 Glycosyl transferases group 1 APT61_RS07690 PF00535 Glycosyl transferase family 2 APT61_RS07695 PF00132 Bacterial transferase hexapeptide (six repeats) APT61_RS07700 PF16363 GDP-mannose 4,6 dehydratase APT61_RS07705 PF01370 NAD dependent epimerase/dehydratase family APT61_RS07710 PF00293 NUDIX domain APT61_RS07715 PF13579 Glycosyl transferase 4-like domain APT61_RS07715 PF00534 Glycosyl transferases group 1 APT61_RS07720 PF00483 Nucleotidyl transferase APT61_RS07720 PF01050 Mannose-6-phosphate isomerase APT61_RS07725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APT61_RS07725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APT61_RS07725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APT61_RS07725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APT61_RS07730 PF02397 Bacterial sugar transferase APT61_RS07740 PF04230 Polysaccharide pyruvyl transferase APT61_RS07745 PF13439 Glycosyltransferase Family 4 APT61_RS07745 PF00534 Glycosyl transferases group 1 APT61_RS07755 PF00483 Nucleotidyl transferase APT61_RS07760 PF16363 GDP-mannose 4,6 dehydratase APT61_RS07765 PF04321 RmlD substrate binding domain APT61_RS07770 PF00483 Nucleotidyl transferase APT61_RS07775 PF14667 Polysaccharide biosynthesis C-terminal domain APT61_RS07775 PF01943 Polysaccharide biosynthesis protein APT61_RS07790 PF13439 Glycosyltransferase Family 4 APT61_RS07790 PF00534 Glycosyl transferases group 1 APT61_RS07800 PF00534 Glycosyl transferases group 1 APT61_RS07805 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain APT61_RS07805 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APT61_RS07810 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain APT61_RS07810 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain APT61_RS07810 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain APT61_RS07815 PF01370 NAD dependent epimerase/dehydratase family APT61_RS07820 PF02706 Chain length determinant protein APT61_RS07825 PF01502 Phosphoribosyl-AMP cyclohydrolase APT61_RS07825 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase APT61_RS07830 PF00977 Histidine biosynthesis protein APT61_RS07835 PF00977 Histidine biosynthesis protein APT61_RS07840 PF00117 Glutamine amidotransferase class-I APT61_RS07845 PF00475 Imidazoleglycerol-phosphate dehydratase APT61_RS07850 PF00155 Aminotransferase class I and II APT61_RS07855 PF00815 Histidinol dehydrogenase APT61_RS07860 PF01634 ATP phosphoribosyltransferase APT61_RS07860 PF08029 HisG, C-terminal domain APT61_RS07865 PF01370 NAD dependent epimerase/dehydratase family APT61_RS07870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS07870 PF03466 LysR substrate binding domain APT61_RS07875 PF13520 Amino acid permease APT61_RS07880 PF08411 Exonuclease C-terminal APT61_RS07880 PF00929 Exonuclease APT61_RS07885 PF00768 D-alanyl-D-alanine carboxypeptidase APT61_RS07885 PF07943 Penicillin-binding protein 5, C-terminal domain APT61_RS07890 PF06445 GyrI-like small molecule binding domain APT61_RS07895 PF04632 Fusaric acid resistance protein family APT61_RS07900 PF04363 Protein of unknown function (DUF496) APT61_RS07910 PF01554 MatE APT61_RS07920 PF01321 Creatinase/Prolidase N-terminal domain APT61_RS07920 PF00557 Metallopeptidase family M24 APT61_RS07925 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus APT61_RS07925 PF01048 Phosphorylase superfamily APT61_RS07930 PF00083 Sugar (and other) transporter APT61_RS07930 PF07690 Major Facilitator Superfamily APT61_RS07935 PF17969 L,D-transpeptidase C-terminal domain APT61_RS07935 PF03734 L,D-transpeptidase catalytic domain APT61_RS07945 PF03466 LysR substrate binding domain APT61_RS07945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS07950 PF03466 LysR substrate binding domain APT61_RS07950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS07960 PF06167 Glucose-regulated metallo-peptidase M90 APT61_RS07970 PF00072 Response regulator receiver domain APT61_RS07975 PF17203 Single cache domain 3 APT61_RS07975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS07975 PF00989 PAS fold APT61_RS07975 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain APT61_RS07980 PF00267 Gram-negative porin APT61_RS07990 PF01966 HD domain APT61_RS07995 PF18284 DNA methylase N-terminal domain APT61_RS07995 PF00145 C-5 cytosine-specific DNA methylase APT61_RS08000 PF03852 DNA mismatch endonuclease Vsr APT61_RS08005 PF00892 EamA-like transporter family APT61_RS08010 PF05661 Protein of unknown function (DUF808) APT61_RS08015 PF09926 Uncharacterized small protein (DUF2158) APT61_RS08020 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS08020 PF17151 Periplasmic sensor domain APT61_RS08030 PF10733 Protein of unknown function (DUF2525) APT61_RS08035 PF10781 Dextransucrase DSRB APT61_RS08040 PF00196 Bacterial regulatory proteins, luxR family APT61_RS08045 PF01311 Bacterial export proteins, family 1 APT61_RS08050 PF01313 Bacterial export proteins, family 3 APT61_RS08055 PF00813 FliP family APT61_RS08060 PF04347 Flagellar biosynthesis protein, FliO APT61_RS08065 PF16973 Flagellar motor switch protein FliN N-terminal APT61_RS08065 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term APT61_RS08070 PF02154 Flagellar motor switch protein FliM APT61_RS08070 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term APT61_RS08075 PF03748 Flagellar basal body-associated protein FliL APT61_RS08080 PF02120 Flagellar hook-length control protein FliK APT61_RS08085 PF02050 Flagellar FliJ protein APT61_RS08090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APT61_RS08090 PF18269 T3SS EscN ATPase C-terminal domain APT61_RS08095 PF02108 Flagellar assembly protein FliH APT61_RS08100 PF14842 FliG N-terminal domain APT61_RS08100 PF14841 FliG middle domain APT61_RS08100 PF01706 FliG C-terminal domain APT61_RS08105 PF01514 Secretory protein of YscJ/FliF family APT61_RS08105 PF08345 Flagellar M-ring protein C-terminal APT61_RS08110 PF02049 Flagellar hook-basal body complex protein FliE APT61_RS08125 PF13987 YedD-like protein APT61_RS08130 PF00128 Alpha amylase, catalytic domain APT61_RS08130 PF02806 Alpha amylase, C-terminal all-beta domain APT61_RS08135 PF05400 Flagellar protein FliT APT61_RS08140 PF02561 Flagellar protein FliS APT61_RS08145 PF02465 Flagellar hook-associated protein 2 N-terminus APT61_RS08145 PF07195 Flagellar hook-associated protein 2 C-terminus APT61_RS08150 PF00700 Bacterial flagellin C-terminal helical region APT61_RS08150 PF00669 Bacterial flagellin N-terminal helical region APT61_RS08155 PF00535 Glycosyl transferase family 2 APT61_RS08165 PF04542 Sigma-70 region 2 APT61_RS08165 PF04539 Sigma-70 region 3 APT61_RS08165 PF04545 Sigma-70, region 4 APT61_RS08170 PF02899 Phage integrase, N-terminal SAM-like domain APT61_RS08175 PF00497 Bacterial extracellular solute-binding proteins, family 3 APT61_RS08180 PF00291 Pyridoxal-phosphate dependent enzyme APT61_RS08185 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS08190 PF00005 ABC transporter APT61_RS08195 PF03472 Autoinducer binding domain APT61_RS08195 PF00196 Bacterial regulatory proteins, luxR family APT61_RS08200 PF10769 Protein of unknown function (DUF2594) APT61_RS08205 PF00196 Bacterial regulatory proteins, luxR family APT61_RS08205 PF00072 Response regulator receiver domain APT61_RS08210 PF01541 GIY-YIG catalytic domain APT61_RS08210 PF02151 UvrB/uvrC motif APT61_RS08210 PF08459 UvrC Helix-hairpin-helix N-terminal APT61_RS08215 PF01066 CDP-alcohol phosphatidyltransferase APT61_RS08240 PF02653 Branched-chain amino acid transport system / permease component APT61_RS08245 PF02653 Branched-chain amino acid transport system / permease component APT61_RS08250 PF00005 ABC transporter APT61_RS08260 PF01841 Transglutaminase-like superfamily APT61_RS08270 PF00403 Heavy-metal-associated domain APT61_RS08275 PF00884 Sulfatase APT61_RS08280 PF00005 ABC transporter APT61_RS08285 PF12399 Branched-chain amino acid ATP-binding cassette transporter APT61_RS08285 PF00005 ABC transporter APT61_RS08290 PF11862 Domain of unknown function (DUF3382) APT61_RS08290 PF02653 Branched-chain amino acid transport system / permease component APT61_RS08295 PF02653 Branched-chain amino acid transport system / permease component APT61_RS08300 PF13458 Periplasmic binding protein APT61_RS08305 PF03695 Uncharacterised protein family (UPF0149) APT61_RS08305 PF02810 SEC-C motif APT61_RS08310 PF03222 Tryptophan/tyrosine permease family APT61_RS08320 PF10678 Protein of unknown function (DUF2492) APT61_RS08325 PF00210 Ferritin-like domain APT61_RS08330 PF13992 YecR-like lipoprotein APT61_RS08340 PF07690 Major Facilitator Superfamily APT61_RS08345 PF10964 Protein of unknown function (DUF2766) APT61_RS08350 PF03605 Anaerobic c4-dicarboxylate membrane transporter APT61_RS08355 PF00210 Ferritin-like domain APT61_RS08365 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family APT61_RS08370 PF00005 ABC transporter APT61_RS08375 PF02653 Branched-chain amino acid transport system / permease component APT61_RS08380 PF02358 Trehalose-phosphatase APT61_RS08385 PF00982 Glycosyltransferase family 20 APT61_RS08390 PF00582 Universal stress protein family APT61_RS08395 PF05247 Flagellar transcriptional activator (FlhD) APT61_RS08400 PF05280 Flagellar transcriptional activator (FlhC) APT61_RS08405 PF01618 MotA/TolQ/ExbB proton channel family APT61_RS08410 PF00691 OmpA family APT61_RS08410 PF13677 Membrane MotB of proton-channel complex MotA/MotB APT61_RS08415 PF01627 Hpt domain APT61_RS08415 PF01584 CheW-like domain APT61_RS08415 PF09078 CheY binding APT61_RS08415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS08415 PF02895 Signal transducing histidine kinase, homodimeric domain APT61_RS08420 PF01584 CheW-like domain APT61_RS08425 PF00375 Sodium:dicarboxylate symporter family APT61_RS08455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APT61_RS08455 PF02203 Tar ligand binding domain homologue APT61_RS08455 PF00672 HAMP domain APT61_RS08460 PF02203 Tar ligand binding domain homologue APT61_RS08460 PF00672 HAMP domain APT61_RS08460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APT61_RS08465 PF01739 CheR methyltransferase, SAM binding domain APT61_RS08465 PF03705 CheR methyltransferase, all-alpha domain APT61_RS08470 PF01339 CheB methylesterase APT61_RS08470 PF00072 Response regulator receiver domain APT61_RS08475 PF00072 Response regulator receiver domain APT61_RS08480 PF04344 Chemotaxis phosphatase, CheZ APT61_RS08485 PF01312 FlhB HrpN YscU SpaS Family APT61_RS08490 PF00771 FHIPEP family APT61_RS08495 PF06366 Flagellar protein FlhE APT61_RS08505 PF07470 Glycosyl Hydrolase Family 88 APT61_RS08510 PF05746 DALR anticodon binding domain APT61_RS08510 PF03485 Arginyl tRNA synthetase N terminal domain APT61_RS08510 PF00750 tRNA synthetases class I (R) APT61_RS08515 PF06185 YecM protein APT61_RS08520 PF03932 CutC family APT61_RS08525 PF08003 Protein of unknown function (DUF1698) APT61_RS08530 PF13649 Methyltransferase domain APT61_RS08535 PF01124 MAPEG family APT61_RS08540 PF01904 Protein of unknown function DUF72 APT61_RS08545 PF00857 Isochorismatase family APT61_RS08550 PF00152 tRNA synthetases class II (D, K and N) APT61_RS08550 PF02938 GAD domain APT61_RS08550 PF01336 OB-fold nucleic acid binding domain APT61_RS08555 PF00293 NUDIX domain APT61_RS08560 PF01709 Transcriptional regulator APT61_RS08565 PF02075 Crossover junction endodeoxyribonuclease RuvC APT61_RS08570 PF07499 RuvA, C-terminal domain APT61_RS08570 PF01330 RuvA N terminal domain APT61_RS08575 PF05491 RuvB C-terminal winged helix domain APT61_RS08575 PF05496 Holliday junction DNA helicase RuvB P-loop domain APT61_RS08575 PF17864 RuvB AAA lid domain APT61_RS08580 PF00950 ABC 3 transport family APT61_RS08585 PF00005 ABC transporter APT61_RS08590 PF01297 Zinc-uptake complex component A periplasmic APT61_RS08595 PF08525 Opacity-associated protein A N-terminal motif APT61_RS08595 PF01476 LysM domain APT61_RS08595 PF01551 Peptidase family M23 APT61_RS08600 PF03279 Bacterial lipid A biosynthesis acyltransferase APT61_RS08605 PF02887 Pyruvate kinase, alpha/beta domain APT61_RS08605 PF00224 Pyruvate kinase, barrel domain APT61_RS08610 PF01418 Helix-turn-helix domain, rpiR family APT61_RS08610 PF01380 SIS domain APT61_RS08620 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain APT61_RS08620 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain APT61_RS08625 PF00920 Dehydratase family APT61_RS08630 PF01081 KDPG and KHG aldolase APT61_RS08635 PF02222 ATP-grasp domain APT61_RS08640 PF13995 YebF-like protein APT61_RS08645 PF04391 Protein of unknown function (DUF533) APT61_RS08650 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain APT61_RS08650 PF00326 Prolyl oligopeptidase family APT61_RS08655 PF00929 Exonuclease APT61_RS08660 PF00795 Carbon-nitrogen hydrolase APT61_RS08665 PF06440 DNA polymerase III, theta subunit APT61_RS08670 PF04234 CopC domain APT61_RS08675 PF05425 Copper resistance protein D APT61_RS08680 PF10709 Protein of unknown function (DUF2511) APT61_RS08685 PF04393 Protein of unknown function (DUF535) APT61_RS08690 PF00149 Calcineurin-like phosphoesterase APT61_RS08695 PF07358 Protein of unknown function (DUF1482) APT61_RS08700 PF07351 Protein of unknown function (DUF1480) APT61_RS08705 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF APT61_RS08705 PF01189 16S rRNA methyltransferase RsmB/F APT61_RS08705 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF APT61_RS08710 PF02470 MlaD protein APT61_RS08715 PF04403 Paraquat-inducible protein A APT61_RS08720 PF13185 GAF domain APT61_RS08725 PF17516 ProQ C-terminal domain APT61_RS08725 PF04352 ProQ/FINO family APT61_RS08730 PF17804 Tail specific protease N-terminal domain APT61_RS08730 PF00595 PDZ domain APT61_RS08730 PF11818 C-terminal domain of tail specific protease (DUF3340) APT61_RS08730 PF03572 Peptidase family S41 APT61_RS08735 PF01435 Peptidase family M48 APT61_RS08740 PF07690 Major Facilitator Superfamily APT61_RS08745 PF01614 Bacterial transcriptional regulator APT61_RS08745 PF09339 IclR helix-turn-helix domain APT61_RS08750 PF13996 YobH-like protein APT61_RS08755 PF13998 MgrB protein APT61_RS08760 PF13974 YebO-like protein APT61_RS08765 PF12706 Beta-lactamase superfamily domain APT61_RS08770 PF00313 'Cold-shock' DNA-binding domain APT61_RS08775 PF03717 Penicillin-binding Protein dimerisation domain APT61_RS08775 PF00905 Penicillin binding protein transpeptidase domain APT61_RS08780 PF13847 Methyltransferase domain APT61_RS08785 PF02659 Putative manganese efflux pump APT61_RS08790 PF06173 Protein of unknown function (DUF986) APT61_RS08795 PF03613 PTS system mannose/fructose/sorbose family IID component APT61_RS08800 PF03609 PTS system sorbose-specific iic component APT61_RS08805 PF03830 PTS system sorbose subfamily IIB component APT61_RS08805 PF03610 PTS system fructose IIA component APT61_RS08810 PF03741 Integral membrane protein TerC family APT61_RS08810 PF03471 Transporter associated domain APT61_RS08815 PF12792 CSS motif domain associated with EAL APT61_RS08815 PF00563 EAL domain APT61_RS08820 PF03315 Serine dehydratase beta chain APT61_RS08820 PF03313 Serine dehydratase alpha chain APT61_RS08825 PF00293 NUDIX domain APT61_RS08830 PF00425 chorismate binding enzyme APT61_RS08830 PF04715 Anthranilate synthase component I, N terminal region APT61_RS08835 PF03701 Uncharacterised protein family (UPF0181) APT61_RS08840 PF01042 Endoribonuclease L-PSP APT61_RS08845 PF13307 Helicase C-terminal domain APT61_RS08845 PF04851 Type III restriction enzyme, res subunit APT61_RS08850 PF00814 Glycoprotease family APT61_RS08855 PF03843 Outer membrane lipoprotein Slp family APT61_RS08860 PF13193 AMP-binding enzyme C-terminal domain APT61_RS08860 PF00501 AMP-binding enzyme APT61_RS08865 PF01612 3'-5' exonuclease APT61_RS08865 PF00570 HRDC domain APT61_RS08870 PF03776 Septum formation topological specificity factor MinE APT61_RS08875 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain APT61_RS08880 PF05209 Septum formation inhibitor MinC, N-terminal domain APT61_RS08880 PF03775 Septum formation inhibitor MinC, C-terminal domain APT61_RS08885 PF05166 YcgL domain APT61_RS08890 PF01557 Fumarylacetoacetate (FAA) hydrolase family APT61_RS08895 PF03692 Putative zinc- or iron-chelating domain APT61_RS08900 PF02600 Disulfide bond formation protein DsbB APT61_RS08905 PF06450 Bacterial Na+/H+ antiporter B (NhaB) APT61_RS08910 PF00392 Bacterial regulatory proteins, gntR family APT61_RS08910 PF07840 FadR C-terminal domain APT61_RS08915 PF04293 SpoVR like protein APT61_RS08920 PF01266 FAD dependent oxidoreductase APT61_RS08925 PF01168 Alanine racemase, N-terminal domain APT61_RS08925 PF00842 Alanine racemase, C-terminal domain APT61_RS08930 PF02080 TrkA-C domain APT61_RS08930 PF03471 Transporter associated domain APT61_RS08930 PF00999 Sodium/hydrogen exchanger family APT61_RS08935 PF17676 LD-carboxypeptidase C-terminal domain APT61_RS08935 PF02016 LD-carboxypeptidase N-terminal domain APT61_RS08940 PF01464 Transglycosylase SLT domain APT61_RS08945 PF07238 PilZ domain APT61_RS08945 PF07317 Flagellar regulator YcgR APT61_RS08950 PF04226 Transglycosylase associated protein APT61_RS08955 PF01204 Trehalase APT61_RS08965 PF00753 Metallo-beta-lactamase superfamily APT61_RS08980 PF07690 Major Facilitator Superfamily APT61_RS08985 PF07690 Major Facilitator Superfamily APT61_RS08995 PF01425 Amidase APT61_RS09000 PF08028 Acyl-CoA dehydrogenase, C-terminal domain APT61_RS09015 PF00355 Rieske [2Fe-2S] domain APT61_RS09015 PF00848 Ring hydroxylating alpha subunit (catalytic domain) APT61_RS09030 PF00111 2Fe-2S iron-sulfur cluster binding domain APT61_RS09030 PF00175 Oxidoreductase NAD-binding domain APT61_RS09035 PF01613 Flavin reductase like domain APT61_RS09040 PF00083 Sugar (and other) transporter APT61_RS09045 PF01144 Coenzyme A transferase APT61_RS09050 PF01144 Coenzyme A transferase APT61_RS09055 PF12146 Serine aminopeptidase, S33 APT61_RS09060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APT61_RS09060 PF13378 Enolase C-terminal domain-like APT61_RS09065 PF02426 Muconolactone delta-isomerase APT61_RS09070 PF00775 Dioxygenase APT61_RS09070 PF04444 Catechol dioxygenase N terminus APT61_RS09075 PF12833 Helix-turn-helix domain APT61_RS09090 PF13474 SnoaL-like domain APT61_RS09100 PF09722 Protein of unknown function (DUF2384) APT61_RS09105 PF00384 Molybdopterin oxidoreductase APT61_RS09110 PF05962 HutD APT61_RS09115 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin APT61_RS09125 PF12833 Helix-turn-helix domain APT61_RS09125 PF01965 DJ-1/PfpI family APT61_RS09130 PF00356 Bacterial regulatory proteins, lacI family APT61_RS09135 PF01306 LacY proton/sugar symporter APT61_RS09140 PF08533 Beta-galactosidase C-terminal domain APT61_RS09140 PF08532 Beta-galactosidase trimerisation domain APT61_RS09140 PF02449 Beta-galactosidase APT61_RS09145 PF06071 Protein of unknown function (DUF933) APT61_RS09145 PF01926 50S ribosome-binding GTPase APT61_RS09150 PF01195 Peptidyl-tRNA hydrolase APT61_RS09155 PF10762 Protein of unknown function (DUF2583) APT61_RS09165 PF01740 STAS domain APT61_RS09165 PF00916 Sulfate permease family APT61_RS09170 PF14572 Phosphoribosyl synthetase-associated domain APT61_RS09170 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase APT61_RS09175 PF08544 GHMP kinases C terminal APT61_RS09175 PF00288 GHMP kinases N terminal domain APT61_RS09180 PF03550 Outer membrane lipoprotein LolB APT61_RS09185 PF01488 Shikimate / quinate 5-dehydrogenase APT61_RS09185 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain APT61_RS09185 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain APT61_RS09190 PF00472 RF-1 domain APT61_RS09190 PF03462 PCRF domain APT61_RS09195 PF13847 Methyltransferase domain APT61_RS09195 PF17827 PrmC N-terminal domain APT61_RS09200 PF04247 Invasion gene expression up-regulator, SirB APT61_RS09205 PF13369 Transglutaminase-like superfamily APT61_RS09210 PF00793 DAHP synthetase I family APT61_RS09215 PF01699 Sodium/calcium exchanger protein APT61_RS09220 PF06150 ChaB APT61_RS09225 PF04752 ChaC-like protein APT61_RS09235 PF02203 Tar ligand binding domain homologue APT61_RS09235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APT61_RS09235 PF00672 HAMP domain APT61_RS09240 PF02635 DsrE/DsrF-like family APT61_RS09245 PF03861 ANTAR domain APT61_RS09245 PF08376 Nitrate and nitrite sensing APT61_RS09255 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS09260 PF00005 ABC transporter APT61_RS09265 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APT61_RS09265 PF04324 BFD-like [2Fe-2S] binding domain APT61_RS09265 PF18267 Rubredoxin NAD+ reductase C-terminal domain APT61_RS09265 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APT61_RS09265 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT61_RS09265 PF13806 Rieske-like [2Fe-2S] domain APT61_RS09270 PF01568 Molydopterin dinucleotide binding domain APT61_RS09270 PF00384 Molybdopterin oxidoreductase APT61_RS09270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APT61_RS09270 PF04324 BFD-like [2Fe-2S] binding domain APT61_RS09275 PF11924 Inverse autotransporter, beta-domain APT61_RS09280 PF00196 Bacterial regulatory proteins, luxR family APT61_RS09280 PF00072 Response regulator receiver domain APT61_RS09285 PF00672 HAMP domain APT61_RS09285 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term APT61_RS09285 PF07730 Histidine kinase APT61_RS09285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS09290 PF07690 Major Facilitator Superfamily APT61_RS09295 PF14710 Respiratory nitrate reductase alpha N-terminal APT61_RS09295 PF01568 Molydopterin dinucleotide binding domain APT61_RS09295 PF00384 Molybdopterin oxidoreductase APT61_RS09300 PF13247 4Fe-4S dicluster domain APT61_RS09300 PF14711 Respiratory nitrate reductase beta C-terminal APT61_RS09305 PF02613 Nitrate reductase delta subunit APT61_RS09310 PF02665 Nitrate reductase gamma subunit APT61_RS09315 PF00892 EamA-like transporter family APT61_RS09320 PF01037 Lrp/AsnC ligand binding domain APT61_RS09355 PF01842 ACT domain APT61_RS09355 PF00551 Formyl transferase APT61_RS09360 PF02810 SEC-C motif APT61_RS09365 PF01734 Patatin-like phospholipase APT61_RS09370 PF00072 Response regulator receiver domain APT61_RS09375 PF00483 Nucleotidyl transferase APT61_RS09380 PF00816 H-NS histone family APT61_RS09385 PF00265 Thymidine kinase APT61_RS09390 PF00465 Iron-containing alcohol dehydrogenase APT61_RS09390 PF00171 Aldehyde dehydrogenase family APT61_RS09395 PF01914 MarC family integral membrane protein APT61_RS09400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APT61_RS09405 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS09410 PF12911 N-terminal TM domain of oligopeptide transport permease C APT61_RS09410 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS09415 PF00005 ABC transporter APT61_RS09415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APT61_RS09420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APT61_RS09420 PF00005 ABC transporter APT61_RS09425 PF04269 Protein of unknown function, DUF440 APT61_RS09430 PF13091 PLD-like domain APT61_RS09430 PF13396 Phospholipase_D-nuclease N-terminal APT61_RS09435 PF01810 LysE type translocator APT61_RS09440 PF03795 YCII-related domain APT61_RS09445 PF03544 Gram-negative bacterial TonB protein C-terminal APT61_RS09450 PF03061 Thioesterase superfamily APT61_RS09455 PF04279 Intracellular septation protein A APT61_RS09465 PF03922 OmpW family APT61_RS09475 PF01206 Sulfurtransferase TusA APT61_RS09480 PF04143 Sulphur transport APT61_RS09485 PF00290 Tryptophan synthase alpha chain APT61_RS09490 PF00291 Pyridoxal-phosphate dependent enzyme APT61_RS09495 PF00218 Indole-3-glycerol phosphate synthase APT61_RS09495 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase APT61_RS09500 PF00117 Glutamine amidotransferase class-I APT61_RS09500 PF02885 Glycosyl transferase family, helical bundle domain APT61_RS09500 PF00591 Glycosyl transferase family, a/b domain APT61_RS09505 PF00425 chorismate binding enzyme APT61_RS09505 PF04715 Anthranilate synthase component I, N terminal region APT61_RS09510 PF02811 PHP domain APT61_RS09515 PF01300 Telomere recombination APT61_RS09530 PF00849 RNA pseudouridylate synthase APT61_RS09530 PF01479 S4 domain APT61_RS09535 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP APT61_RS09535 PF12557 Cob(I)alamin adenosyltransferase N terminal APT61_RS09540 PF00106 short chain dehydrogenase APT61_RS09545 PF01343 Peptidase family S49 APT61_RS09545 PF08496 Peptidase family S49 N-terminal APT61_RS09550 PF10692 Protein of unknown function (DUF2498) APT61_RS09555 PF08272 Topoisomerase I zinc-ribbon-like APT61_RS09555 PF01751 Toprim domain APT61_RS09555 PF01131 DNA topoisomerase APT61_RS09555 PF01396 Topoisomerase DNA binding C4 zinc finger APT61_RS09560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS09560 PF03466 LysR substrate binding domain APT61_RS09565 PF00694 Aconitase C-terminal domain APT61_RS09565 PF00330 Aconitase family (aconitate hydratase) APT61_RS09570 PF00925 GTP cyclohydrolase II APT61_RS09575 PF01569 PAP2 superfamily APT61_RS09580 PF06305 Lipopolysaccharide assembly protein A domain APT61_RS09585 PF18073 Rubredoxin metal binding domain APT61_RS09590 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family APT61_RS09595 PF01253 Translation initiation factor SUI1 APT61_RS09600 PF05433 Glycine zipper 2TM domain APT61_RS09605 PF08220 DeoR-like helix-turn-helix domain APT61_RS09605 PF00455 DeoR C terminal sensor domain APT61_RS09615 PF00378 Enoyl-CoA hydratase/isomerase APT61_RS09620 PF13426 PAS domain APT61_RS09620 PF00563 EAL domain APT61_RS09620 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS09625 PF08206 Ribonuclease B OB domain APT61_RS09625 PF00575 S1 RNA binding domain APT61_RS09625 PF00773 RNB domain APT61_RS09625 PF17876 Cold shock domain APT61_RS09640 PF00005 ABC transporter APT61_RS09645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APT61_RS09645 PF00005 ABC transporter APT61_RS09650 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS09650 PF12911 N-terminal TM domain of oligopeptide transport permease C APT61_RS09655 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS09660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APT61_RS09665 PF00158 Sigma-54 interaction domain APT61_RS09665 PF02954 Bacterial regulatory protein, Fis family APT61_RS09670 PF04012 PspA/IM30 family APT61_RS09675 PF06667 Phage shock protein B APT61_RS09680 PF04024 PspC domain APT61_RS09685 PF09584 Phage shock protein PspD (Phageshock_PspD) APT61_RS09690 PF00128 Alpha amylase, catalytic domain APT61_RS09695 PF01547 Bacterial extracellular solute-binding protein APT61_RS09705 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS09710 PF00107 Zinc-binding dehydrogenase APT61_RS09715 PF01261 Xylose isomerase-like TIM barrel APT61_RS09720 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APT61_RS09720 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APT61_RS09725 PF03636 Glycosyl hydrolase family 65, N-terminal domain APT61_RS09725 PF03633 Glycosyl hydrolase family 65, C-terminal domain APT61_RS09725 PF03632 Glycosyl hydrolase family 65 central catalytic domain APT61_RS09730 PF13419 Haloacid dehalogenase-like hydrolase APT61_RS09735 PF17912 MalK OB fold domain APT61_RS09735 PF00005 ABC transporter APT61_RS09735 PF03459 TOBE domain APT61_RS09740 PF09381 Outer membrane protein G (OmpG) APT61_RS09745 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family APT61_RS09745 PF00356 Bacterial regulatory proteins, lacI family APT61_RS09750 PF04317 YcjX-like family, DUF463 APT61_RS09755 PF05128 Domain of unknown function (DUF697) APT61_RS09760 PF18024 Helix-turn-helix domain APT61_RS09760 PF00158 Sigma-54 interaction domain APT61_RS09765 PF08534 Redoxin APT61_RS09770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APT61_RS09770 PF13378 Enolase C-terminal domain-like APT61_RS09775 PF00246 Zinc carboxypeptidase APT61_RS09780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APT61_RS09785 PF13460 NAD(P)H-binding APT61_RS09805 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath APT61_RS09820 PF13488 Glycine zipper APT61_RS09820 PF00691 OmpA family APT61_RS09830 PF00004 ATPase family associated with various cellular activities (AAA) APT61_RS09830 PF17871 AAA lid domain APT61_RS09830 PF07724 AAA domain (Cdc48 subfamily) APT61_RS09830 PF10431 C-terminal, D2-small domain, of ClpB protein APT61_RS09850 PF03781 Sulfatase-modifying factor enzyme 1 APT61_RS09850 PF00069 Protein kinase domain APT61_RS09855 PF03781 Sulfatase-modifying factor enzyme 1 APT61_RS09860 PF03781 Sulfatase-modifying factor enzyme 1 APT61_RS09865 PF03781 Sulfatase-modifying factor enzyme 1 APT61_RS09915 PF01965 DJ-1/PfpI family APT61_RS09920 PF08448 PAS fold APT61_RS09920 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS09925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APT61_RS09925 PF02203 Tar ligand binding domain homologue APT61_RS09925 PF00672 HAMP domain APT61_RS09930 PF01544 CorA-like Mg2+ transporter protein APT61_RS09935 PF03880 DbpA RNA binding domain APT61_RS09935 PF00270 DEAD/DEAH box helicase APT61_RS09935 PF00271 Helicase conserved C-terminal domain APT61_RS09940 PF01171 PP-loop family APT61_RS09960 PF00267 Gram-negative porin APT61_RS09965 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II APT61_RS09965 PF10371 Domain of unknown function APT61_RS09965 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase APT61_RS09965 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg APT61_RS09965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APT61_RS09970 PF03891 Domain of unknown function (DUF333) APT61_RS09975 PF03724 META domain APT61_RS09980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APT61_RS09980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APT61_RS09990 PF11739 Dicarboxylate transport APT61_RS09995 PF13617 YnbE-like lipoprotein APT61_RS10000 PF07027 Protein of unknown function (DUF1318) APT61_RS10005 PF14525 AraC-binding-like domain APT61_RS10005 PF12833 Helix-turn-helix domain APT61_RS10010 PF00171 Aldehyde dehydrogenase family APT61_RS10015 PF02727 Copper amine oxidase, N2 domain APT61_RS10015 PF07833 Copper amine oxidase N-terminal domain APT61_RS10015 PF02728 Copper amine oxidase, N3 domain APT61_RS10015 PF01179 Copper amine oxidase, enzyme domain APT61_RS10020 PF00171 Aldehyde dehydrogenase family APT61_RS10020 PF01575 MaoC like domain APT61_RS10025 PF05138 Phenylacetic acid catabolic protein APT61_RS10030 PF06243 Phenylacetic acid degradation B APT61_RS10035 PF05138 Phenylacetic acid catabolic protein APT61_RS10040 PF01883 Iron-sulfur cluster assembly protein APT61_RS10045 PF00175 Oxidoreductase NAD-binding domain APT61_RS10045 PF00111 2Fe-2S iron-sulfur cluster binding domain APT61_RS10045 PF00970 Oxidoreductase FAD-binding domain APT61_RS10050 PF00378 Enoyl-CoA hydratase/isomerase APT61_RS10055 PF00378 Enoyl-CoA hydratase/isomerase APT61_RS10060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain APT61_RS10060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain APT61_RS10060 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain APT61_RS10065 PF03061 Thioesterase superfamily APT61_RS10070 PF02803 Thiolase, C-terminal domain APT61_RS10070 PF00108 Thiolase, N-terminal domain APT61_RS10075 PF00501 AMP-binding enzyme APT61_RS10075 PF14535 AMP-binding enzyme C-terminal domain APT61_RS10080 PF08223 PaaX-like protein C-terminal domain APT61_RS10080 PF07848 PaaX-like protein APT61_RS10085 PF00132 Bacterial transferase hexapeptide (six repeats) APT61_RS10090 PF02837 Glycosyl hydrolases family 2, sugar binding domain APT61_RS10090 PF02836 Glycosyl hydrolases family 2, TIM barrel domain APT61_RS10090 PF16355 Domain of unknown function (DUF4982) APT61_RS10090 PF00703 Glycosyl hydrolases family 2 APT61_RS10095 PF00512 His Kinase A (phospho-acceptor) domain APT61_RS10095 PF00672 HAMP domain APT61_RS10095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS10095 PF01627 Hpt domain APT61_RS10095 PF00072 Response regulator receiver domain APT61_RS10095 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) APT61_RS10120 PF00535 Glycosyl transferase family 2 APT61_RS10120 PF03170 Bacterial cellulose synthase subunit APT61_RS10120 PF07238 PilZ domain APT61_RS10135 PF00072 Response regulator receiver domain APT61_RS10135 PF00486 Transcriptional regulatory protein, C terminal APT61_RS10140 PF01740 STAS domain APT61_RS10150 PF02525 Flavodoxin-like fold APT61_RS10155 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold APT61_RS10155 PF00271 Helicase conserved C-terminal domain APT61_RS10155 PF04408 Helicase associated domain (HA2) APT61_RS10155 PF00270 DEAD/DEAH box helicase APT61_RS10155 PF11898 Domain of unknown function (DUF3418) APT61_RS10160 PF01596 O-methyltransferase APT61_RS10165 PF02321 Outer membrane efflux protein APT61_RS10170 PF13533 Biotin-lipoyl like APT61_RS10180 PF00083 Sugar (and other) transporter APT61_RS10185 PF02698 DUF218 domain APT61_RS10190 PF00171 Aldehyde dehydrogenase family APT61_RS10205 PF13472 GDSL-like Lipase/Acylhydrolase family APT61_RS10205 PF07859 alpha/beta hydrolase fold APT61_RS10210 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APT61_RS10210 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain APT61_RS10215 PF01292 Prokaryotic cytochrome b561 APT61_RS10220 PF08946 Osmosensory transporter coiled coil APT61_RS10220 PF00083 Sugar (and other) transporter APT61_RS10230 PF10685 Stress-induced bacterial acidophilic repeat motif APT61_RS10235 PF00155 Aminotransferase class I and II APT61_RS10235 PF00392 Bacterial regulatory proteins, gntR family APT61_RS10240 PF00892 EamA-like transporter family APT61_RS10250 PF00717 Peptidase S24-like APT61_RS10265 PF11798 IMS family HHH motif APT61_RS10265 PF13438 Domain of unknown function (DUF4113) APT61_RS10265 PF00817 impB/mucB/samB family APT61_RS10265 PF11799 impB/mucB/samB family C-terminal domain APT61_RS10270 PF02586 SOS response associated peptidase (SRAP) APT61_RS10275 PF00892 EamA-like transporter family APT61_RS10280 PF00723 Glycosyl hydrolases family 15 APT61_RS10295 PF00724 NADH:flavin oxidoreductase / NADH oxidase family APT61_RS10300 PF00724 NADH:flavin oxidoreductase / NADH oxidase family APT61_RS10305 PF00106 short chain dehydrogenase APT61_RS10310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS10310 PF03466 LysR substrate binding domain APT61_RS10320 PF01011 PQQ enzyme repeat APT61_RS10325 PF13098 Thioredoxin-like domain APT61_RS10330 PF11412 Disulphide bond corrector protein DsbC APT61_RS10330 PF02683 Cytochrome C biogenesis protein transmembrane region APT61_RS10360 PF05525 Branched-chain amino acid transport protein APT61_RS10365 PF01593 Flavin containing amine oxidoreductase APT61_RS10375 PF02627 Carboxymuconolactone decarboxylase family APT61_RS10385 PF03466 LysR substrate binding domain APT61_RS10385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS10405 PF08240 Alcohol dehydrogenase GroES-like domain APT61_RS10405 PF00107 Zinc-binding dehydrogenase APT61_RS10410 PF07690 Major Facilitator Superfamily APT61_RS10430 PF07690 Major Facilitator Superfamily APT61_RS10435 PF03466 LysR substrate binding domain APT61_RS10435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS10440 PF01037 Lrp/AsnC ligand binding domain APT61_RS10445 PF07690 Major Facilitator Superfamily APT61_RS10450 PF02567 Phenazine biosynthesis-like protein APT61_RS10455 PF08267 Cobalamin-independent synthase, N-terminal domain APT61_RS10455 PF01717 Cobalamin-independent synthase, Catalytic domain APT61_RS10475 PF08031 Berberine and berberine like APT61_RS10475 PF01565 FAD binding domain APT61_RS10480 PF10798 Biofilm development protein YmgB/AriR APT61_RS10490 PF10798 Biofilm development protein YmgB/AriR APT61_RS10495 PF02583 Metal-sensitive transcriptional repressor APT61_RS10500 PF08240 Alcohol dehydrogenase GroES-like domain APT61_RS10500 PF00107 Zinc-binding dehydrogenase APT61_RS10505 PF02203 Tar ligand binding domain homologue APT61_RS10505 PF00672 HAMP domain APT61_RS10505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APT61_RS10515 PF01011 PQQ enzyme repeat APT61_RS10520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS10520 PF03466 LysR substrate binding domain APT61_RS10525 PF07063 Domain of unknown function (DUF1338) APT61_RS10530 PF00135 Carboxylesterase family APT61_RS10535 PF03466 LysR substrate binding domain APT61_RS10535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS10540 PF00155 Aminotransferase class I and II APT61_RS10545 PF00497 Bacterial extracellular solute-binding proteins, family 3 APT61_RS10550 PF04349 Periplasmic glucan biosynthesis protein, MdoG APT61_RS10555 PF13302 Acetyltransferase (GNAT) domain APT61_RS10560 PF18836 Beta solenoid repeat from YDCK APT61_RS10565 PF03595 Voltage-dependent anion channel APT61_RS10570 PF03848 Tellurite resistance protein TehB APT61_RS10595 PF01546 Peptidase family M20/M25/M40 APT61_RS10595 PF07687 Peptidase dimerisation domain APT61_RS10600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APT61_RS10605 PF11769 Protein of unknown function (DUF3313) APT61_RS10610 PF00892 EamA-like transporter family APT61_RS10620 PF03594 Benzoate membrane transport protein APT61_RS10625 PF01381 Helix-turn-helix APT61_RS10625 PF07883 Cupin domain APT61_RS10630 PF12392 Collagenase APT61_RS10630 PF01136 Peptidase family U32 APT61_RS10635 PF10829 Protein of unknown function (DUF2554) APT61_RS10640 PF02322 Cytochrome bd terminal oxidase subunit II APT61_RS10645 PF01654 Cytochrome bd terminal oxidase subunit I APT61_RS10660 PF00296 Luciferase-like monooxygenase APT61_RS10665 PF00155 Aminotransferase class I and II APT61_RS10665 PF00392 Bacterial regulatory proteins, gntR family APT61_RS10670 PF13416 Bacterial extracellular solute-binding protein APT61_RS10675 PF00005 ABC transporter APT61_RS10675 PF08402 TOBE domain APT61_RS10680 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS10685 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS10690 PF00171 Aldehyde dehydrogenase family APT61_RS10695 PF08884 Flagellin D3 domain APT61_RS10695 PF00669 Bacterial flagellin N-terminal helical region APT61_RS10695 PF00700 Bacterial flagellin C-terminal helical region APT61_RS10700 PF08956 Domain of unknown function (DUF1869) APT61_RS10705 PF09313 Domain of unknown function (DUF1971) APT61_RS10730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APT61_RS10735 PF10735 Protein of unknown function (DUF2526) APT61_RS10740 PF04657 Putative inner membrane exporter, YdcZ APT61_RS10745 PF00583 Acetyltransferase (GNAT) family APT61_RS10750 PF08671 Anti-repressor SinI APT61_RS10750 PF01381 Helix-turn-helix APT61_RS10755 PF00107 Zinc-binding dehydrogenase APT61_RS10755 PF16884 N-terminal domain of oxidoreductase APT61_RS10760 PF00392 Bacterial regulatory proteins, gntR family APT61_RS10760 PF07729 FCD domain APT61_RS10765 PF07715 TonB-dependent Receptor Plug Domain APT61_RS10765 PF00593 TonB dependent receptor APT61_RS10775 PF00440 Bacterial regulatory proteins, tetR family APT61_RS10780 PF01042 Endoribonuclease L-PSP APT61_RS10785 PF00324 Amino acid permease APT61_RS10790 PF00248 Aldo/keto reductase family APT61_RS10795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS10795 PF03466 LysR substrate binding domain APT61_RS10815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APT61_RS10815 PF08447 PAS fold APT61_RS10820 PF01202 Shikimate kinase APT61_RS10825 PF00296 Luciferase-like monooxygenase APT61_RS10830 PF01546 Peptidase family M20/M25/M40 APT61_RS10830 PF07687 Peptidase dimerisation domain APT61_RS10835 PF00296 Luciferase-like monooxygenase APT61_RS10840 PF00497 Bacterial extracellular solute-binding proteins, family 3 APT61_RS10850 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS10855 PF00005 ABC transporter APT61_RS10865 PF13417 Glutathione S-transferase, N-terminal domain APT61_RS10870 PF01361 Tautomerase enzyme APT61_RS10875 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) APT61_RS10875 PF13296 Putative type VI secretion system Rhs element Vgr APT61_RS10875 PF04717 Type VI secretion system, phage-baseplate injector APT61_RS10935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS10935 PF03466 LysR substrate binding domain APT61_RS10940 PF00753 Metallo-beta-lactamase superfamily APT61_RS10945 PF00009 Elongation factor Tu GTP binding domain APT61_RS10945 PF03764 Elongation factor G, domain IV APT61_RS10945 PF00679 Elongation factor G C-terminus APT61_RS10945 PF03144 Elongation factor Tu domain 2 APT61_RS10945 PF14492 Elongation Factor G, domain II APT61_RS10955 PF01613 Flavin reductase like domain APT61_RS10960 PF08402 TOBE domain APT61_RS10960 PF00005 ABC transporter APT61_RS10970 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS10975 PF00797 N-acetyltransferase APT61_RS10980 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system APT61_RS10985 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin APT61_RS10990 PF02665 Nitrate reductase gamma subunit APT61_RS10995 PF02613 Nitrate reductase delta subunit APT61_RS11000 PF14711 Respiratory nitrate reductase beta C-terminal APT61_RS11000 PF13247 4Fe-4S dicluster domain APT61_RS11005 PF14710 Respiratory nitrate reductase alpha N-terminal APT61_RS11005 PF01568 Molydopterin dinucleotide binding domain APT61_RS11005 PF00384 Molybdopterin oxidoreductase APT61_RS11010 PF07690 Major Facilitator Superfamily APT61_RS11015 PF00440 Bacterial regulatory proteins, tetR family APT61_RS11020 PF07690 Major Facilitator Superfamily APT61_RS11025 PF01546 Peptidase family M20/M25/M40 APT61_RS11025 PF07687 Peptidase dimerisation domain APT61_RS11035 PF13458 Periplasmic binding protein APT61_RS11040 PF00005 ABC transporter APT61_RS11045 PF00005 ABC transporter APT61_RS11045 PF12399 Branched-chain amino acid ATP-binding cassette transporter APT61_RS11050 PF11862 Domain of unknown function (DUF3382) APT61_RS11050 PF02653 Branched-chain amino acid transport system / permease component APT61_RS11055 PF02653 Branched-chain amino acid transport system / permease component APT61_RS11060 PF03466 LysR substrate binding domain APT61_RS11060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS11085 PF00892 EamA-like transporter family APT61_RS11090 PF01568 Molydopterin dinucleotide binding domain APT61_RS11090 PF00384 Molybdopterin oxidoreductase APT61_RS11090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APT61_RS11095 PF01568 Molydopterin dinucleotide binding domain APT61_RS11095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APT61_RS11095 PF00384 Molybdopterin oxidoreductase APT61_RS11100 PF13247 4Fe-4S dicluster domain APT61_RS11100 PF09163 Formate dehydrogenase N, transmembrane APT61_RS11100 PF12800 4Fe-4S binding domain APT61_RS11105 PF01292 Prokaryotic cytochrome b561 APT61_RS11110 PF03976 Polyphosphate kinase 2 (PPK2) APT61_RS11115 PF07690 Major Facilitator Superfamily APT61_RS11135 PF00296 Luciferase-like monooxygenase APT61_RS11140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APT61_RS11140 PF00005 ABC transporter APT61_RS11145 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS11145 PF12911 N-terminal TM domain of oligopeptide transport permease C APT61_RS11150 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS11155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APT61_RS11160 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT61_RS11170 PF08240 Alcohol dehydrogenase GroES-like domain APT61_RS11170 PF00107 Zinc-binding dehydrogenase APT61_RS11175 PF00719 Inorganic pyrophosphatase APT61_RS11180 PF00005 ABC transporter APT61_RS11180 PF12848 ABC transporter APT61_RS11185 PF07690 Major Facilitator Superfamily APT61_RS11190 PF01844 HNH endonuclease APT61_RS11195 PF03949 Malic enzyme, NAD binding domain APT61_RS11195 PF00390 Malic enzyme, N-terminal domain APT61_RS11200 PF08136 30S ribosomal protein subunit S22 family APT61_RS11205 PF10684 Putative biofilm-dependent modulation protein APT61_RS11215 PF02566 OsmC-like protein APT61_RS11220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS11220 PF03466 LysR substrate binding domain APT61_RS11230 PF05426 Alginate lyase APT61_RS11235 PF04940 Sensors of blue-light using FAD APT61_RS11235 PF00563 EAL domain APT61_RS11240 PF00672 HAMP domain APT61_RS11240 PF02203 Tar ligand binding domain homologue APT61_RS11240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APT61_RS11245 PF11941 Domain of unknown function (DUF3459) APT61_RS11245 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APT61_RS11245 PF00128 Alpha amylase, catalytic domain APT61_RS11250 PF00128 Alpha amylase, catalytic domain APT61_RS11255 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APT61_RS11255 PF00128 Alpha amylase, catalytic domain APT61_RS11260 PF09905 DNA-binding protein VF530 APT61_RS11265 PF00149 Calcineurin-like phosphoesterase APT61_RS11270 PF05977 Transmembrane secretion effector APT61_RS11280 PF02638 Glycosyl hydrolase-like 10 APT61_RS11285 PF01872 RibD C-terminal domain APT61_RS11295 PF01425 Amidase APT61_RS11300 PF00196 Bacterial regulatory proteins, luxR family APT61_RS11310 PF01381 Helix-turn-helix APT61_RS11315 PF13657 HipA N-terminal domain APT61_RS11315 PF07804 HipA-like C-terminal domain APT61_RS11325 PF00593 TonB dependent receptor APT61_RS11325 PF07715 TonB-dependent Receptor Plug Domain APT61_RS11330 PF00155 Aminotransferase class I and II APT61_RS11335 PF00561 alpha/beta hydrolase fold APT61_RS11340 PF07690 Major Facilitator Superfamily APT61_RS11345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS11345 PF03466 LysR substrate binding domain APT61_RS11350 PF00300 Histidine phosphatase superfamily (branch 1) APT61_RS11365 PF00392 Bacterial regulatory proteins, gntR family APT61_RS11365 PF00155 Aminotransferase class I and II APT61_RS11370 PF01678 Diaminopimelate epimerase APT61_RS11375 PF13417 Glutathione S-transferase, N-terminal domain APT61_RS11375 PF04399 Glutaredoxin 2, C terminal domain APT61_RS11385 PF04143 Sulphur transport APT61_RS11405 PF08220 DeoR-like helix-turn-helix domain APT61_RS11405 PF00455 DeoR C terminal sensor domain APT61_RS11410 PF00293 NUDIX domain APT61_RS11415 PF13649 Methyltransferase domain APT61_RS11420 PF00578 AhpC/TSA family APT61_RS11420 PF02683 Cytochrome C biogenesis protein transmembrane region APT61_RS11420 PF17991 Thioredoxin like C-terminal domain APT61_RS11425 PF00512 His Kinase A (phospho-acceptor) domain APT61_RS11425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS11425 PF00672 HAMP domain APT61_RS11430 PF00072 Response regulator receiver domain APT61_RS11430 PF00486 Transcriptional regulatory protein, C terminal APT61_RS11435 PF00561 alpha/beta hydrolase fold APT61_RS11440 PF01062 Bestrophin, RFP-TM, chloride channel APT61_RS11445 PF08125 Mannitol dehydrogenase C-terminal domain APT61_RS11445 PF01232 Mannitol dehydrogenase Rossmann domain APT61_RS11455 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS11460 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS11465 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS11470 PF04960 Glutaminase APT61_RS11475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APT61_RS11475 PF02203 Tar ligand binding domain homologue APT61_RS11475 PF00672 HAMP domain APT61_RS11480 PF00171 Aldehyde dehydrogenase family APT61_RS11485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS11485 PF03466 LysR substrate binding domain APT61_RS11490 PF00583 Acetyltransferase (GNAT) family APT61_RS11495 PF00056 lactate/malate dehydrogenase, NAD binding domain APT61_RS11495 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain APT61_RS11500 PF00455 DeoR C terminal sensor domain APT61_RS11500 PF08220 DeoR-like helix-turn-helix domain APT61_RS11505 PF04166 Pyridoxal phosphate biosynthetic protein PdxA APT61_RS11510 PF07005 Sugar-binding N-terminal domain APT61_RS11510 PF17042 Nucleotide-binding C-terminal domain APT61_RS11515 PF00465 Iron-containing alcohol dehydrogenase APT61_RS11520 PF00701 Dihydrodipicolinate synthetase family APT61_RS11550 PF02567 Phenazine biosynthesis-like protein APT61_RS11555 PF02567 Phenazine biosynthesis-like protein APT61_RS11560 PF07690 Major Facilitator Superfamily APT61_RS11565 PF01914 MarC family integral membrane protein APT61_RS11570 PF01047 MarR family APT61_RS11575 PF12833 Helix-turn-helix domain APT61_RS11580 PF13999 MarB protein APT61_RS11585 PF00892 EamA-like transporter family APT61_RS11590 PF07690 Major Facilitator Superfamily APT61_RS11610 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment APT61_RS11615 PF00005 ABC transporter APT61_RS11620 PF00005 ABC transporter APT61_RS11630 PF02653 Branched-chain amino acid transport system / permease component APT61_RS11635 PF13458 Periplasmic binding protein APT61_RS11640 PF01717 Cobalamin-independent synthase, Catalytic domain APT61_RS11650 PF00583 Acetyltransferase (GNAT) family APT61_RS11655 PF06291 Bor protein APT61_RS11670 PF07690 Major Facilitator Superfamily APT61_RS11675 PF03466 LysR substrate binding domain APT61_RS11675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS11680 PF01432 Peptidase family M3 APT61_RS11685 PF00106 short chain dehydrogenase APT61_RS11690 PF07729 FCD domain APT61_RS11690 PF00392 Bacterial regulatory proteins, gntR family APT61_RS11695 PF00582 Universal stress protein family APT61_RS11700 PF14001 YdfZ protein APT61_RS11705 PF08125 Mannitol dehydrogenase C-terminal domain APT61_RS11705 PF01232 Mannitol dehydrogenase Rossmann domain APT61_RS11710 PF00083 Sugar (and other) transporter APT61_RS11710 PF07690 Major Facilitator Superfamily APT61_RS11715 PF00107 Zinc-binding dehydrogenase APT61_RS11715 PF08240 Alcohol dehydrogenase GroES-like domain APT61_RS11720 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APT61_RS11720 PF13378 Enolase C-terminal domain-like APT61_RS11725 PF02694 Uncharacterised BCR, YnfA/UPF0060 family APT61_RS11730 PF06932 Protein of unknown function (DUF1283) APT61_RS11735 PF06788 Uncharacterised protein family (UPF0257) APT61_RS11740 PF06649 Protein of unknown function (DUF1161) APT61_RS11745 PF00384 Molybdopterin oxidoreductase APT61_RS11745 PF01568 Molydopterin dinucleotide binding domain APT61_RS11745 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APT61_RS11750 PF13247 4Fe-4S dicluster domain APT61_RS11750 PF12800 4Fe-4S binding domain APT61_RS11755 PF04976 DMSO reductase anchor subunit (DmsC) APT61_RS11760 PF02613 Nitrate reductase delta subunit APT61_RS11765 PF01425 Amidase APT61_RS11770 PF00289 Biotin carboxylase, N-terminal domain APT61_RS11770 PF02785 Biotin carboxylase C-terminal domain APT61_RS11770 PF18140 Propionyl-coenzyme A carboxylase BT domain APT61_RS11770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APT61_RS11770 PF00364 Biotin-requiring enzyme APT61_RS11775 PF09347 Domain of unknown function (DUF1989) APT61_RS11785 PF00005 ABC transporter APT61_RS11795 PF09084 NMT1/THI5 like APT61_RS11800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS11800 PF03466 LysR substrate binding domain APT61_RS11810 PF01614 Bacterial transcriptional regulator APT61_RS11810 PF09339 IclR helix-turn-helix domain APT61_RS11820 PF13533 Biotin-lipoyl like APT61_RS11825 PF00392 Bacterial regulatory proteins, gntR family APT61_RS11825 PF00155 Aminotransferase class I and II APT61_RS11835 PF02525 Flavodoxin-like fold APT61_RS11840 PF02627 Carboxymuconolactone decarboxylase family APT61_RS11845 PF02627 Carboxymuconolactone decarboxylase family APT61_RS11850 PF03466 LysR substrate binding domain APT61_RS11850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS11870 PF00561 alpha/beta hydrolase fold APT61_RS11875 PF01965 DJ-1/PfpI family APT61_RS11875 PF12833 Helix-turn-helix domain APT61_RS11885 PF00561 alpha/beta hydrolase fold APT61_RS11885 PF08386 TAP-like protein APT61_RS11895 PF00535 Glycosyl transferase family 2 APT61_RS11900 PF14883 Hypothetical glycosyl hydrolase family 13 APT61_RS11900 PF01522 Polysaccharide deacetylase APT61_RS11910 PF04575 Protein of unknown function (DUF560) APT61_RS11915 PF17483 C-lobe handle domain of Tf-binding protein B APT61_RS11915 PF17484 N-Lobe handle Tf-binding protein B APT61_RS11915 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B APT61_RS11930 PF00440 Bacterial regulatory proteins, tetR family APT61_RS11935 PF00248 Aldo/keto reductase family APT61_RS11940 PF00144 Beta-lactamase APT61_RS11960 PF07715 TonB-dependent Receptor Plug Domain APT61_RS11960 PF00593 TonB dependent receptor APT61_RS11965 PF06183 DinI-like family APT61_RS11970 PF00255 Glutathione peroxidase APT61_RS11975 PF07130 YebG protein APT61_RS11985 PF00043 Glutathione S-transferase, C-terminal domain APT61_RS11985 PF13417 Glutathione S-transferase, N-terminal domain APT61_RS11995 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS12000 PF04069 Substrate binding domain of ABC-type glycine betaine transport system APT61_RS12005 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS12010 PF00005 ABC transporter APT61_RS12010 PF00571 CBS domain APT61_RS12015 PF00654 Voltage gated chloride channel APT61_RS12025 PF00480 ROK family APT61_RS12030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS12030 PF03466 LysR substrate binding domain APT61_RS12035 PF07690 Major Facilitator Superfamily APT61_RS12040 PF02074 Carboxypeptidase Taq (M32) metallopeptidase APT61_RS12050 PF00089 Trypsin APT61_RS12055 PF08447 PAS fold APT61_RS12055 PF00563 EAL domain APT61_RS12055 PF08448 PAS fold APT61_RS12055 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS12060 PF00893 Small Multidrug Resistance protein APT61_RS12065 PF00893 Small Multidrug Resistance protein APT61_RS12070 PF01594 AI-2E family transporter APT61_RS12080 PF01713 Smr domain APT61_RS12085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS12085 PF03466 LysR substrate binding domain APT61_RS12090 PF01546 Peptidase family M20/M25/M40 APT61_RS12090 PF07687 Peptidase dimerisation domain APT61_RS12095 PF01546 Peptidase family M20/M25/M40 APT61_RS12100 PF03806 AbgT putative transporter family APT61_RS12105 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain APT61_RS12105 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain APT61_RS12110 PF13545 Crp-like helix-turn-helix domain APT61_RS12110 PF00027 Cyclic nucleotide-binding domain APT61_RS12115 PF00582 Universal stress protein family APT61_RS12120 PF00924 Mechanosensitive ion channel APT61_RS12125 PF02233 NAD(P) transhydrogenase beta subunit APT61_RS12130 PF01262 Alanine dehydrogenase/PNT, C-terminal domain APT61_RS12130 PF05222 Alanine dehydrogenase/PNT, N-terminal domain APT61_RS12130 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch APT61_RS12135 PF07338 Protein of unknown function (DUF1471) APT61_RS12140 PF13520 Amino acid permease APT61_RS12150 PF06942 GlpM protein APT61_RS12155 PF00072 Response regulator receiver domain APT61_RS12155 PF00486 Transcriptional regulatory protein, C terminal APT61_RS12165 PF01032 FecCD transport family APT61_RS12170 PF00005 ABC transporter APT61_RS12175 PF00672 HAMP domain APT61_RS12175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS12175 PF00512 His Kinase A (phospho-acceptor) domain APT61_RS12180 PF05472 DNA replication terminus site-binding protein (Ter protein) APT61_RS12185 PF00206 Lyase APT61_RS12185 PF10415 Fumarase C C-terminus APT61_RS12190 PF05683 Fumarase C-terminus APT61_RS12190 PF05681 Fumarate hydratase (Fumerase) APT61_RS12195 PF01238 Phosphomannose isomerase type I APT61_RS12200 PF06097 Bacterial protein of unknown function (DUF945) APT61_RS12205 PF00356 Bacterial regulatory proteins, lacI family APT61_RS12205 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family APT61_RS12210 PF02378 Phosphotransferase system, EIIC APT61_RS12210 PF00367 phosphotransferase system, EIIB APT61_RS12215 PF00155 Aminotransferase class I and II APT61_RS12285 PF06791 Prophage tail length tape measure protein APT61_RS12360 PF03592 Terminase small subunit APT61_RS12360 PF10668 Phage terminase small subunit APT61_RS12400 PF03589 Antitermination protein APT61_RS12410 PF05866 Endodeoxyribonuclease RusA APT61_RS12415 PF07102 Protein of unknown function (DUF1364) APT61_RS12455 PF01695 IstB-like ATP binding protein APT61_RS12495 PF12684 PDDEXK-like domain of unknown function (DUF3799) APT61_RS12495 PF06630 Enterobacterial exodeoxyribonuclease VIII APT61_RS12510 PF06806 Putative excisionase (DUF1233) APT61_RS12515 PF12167 Arm DNA-binding domain APT61_RS12515 PF00589 Phage integrase family APT61_RS12520 PF00962 Adenosine/AMP deaminase APT61_RS12525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APT61_RS12525 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APT61_RS12535 PF05321 Haemolysin expression modulating protein APT61_RS12540 PF10754 Protein of unknown function (DUF2569) APT61_RS12545 PF02508 Rnf-Nqr subunit, membrane protein APT61_RS12550 PF04060 Putative Fe-S cluster APT61_RS12555 PF10531 SLBB domain APT61_RS12555 PF13375 RnfC Barrel sandwich hybrid domain APT61_RS12555 PF12838 4Fe-4S dicluster domain APT61_RS12555 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit APT61_RS12560 PF03116 NQR2, RnfD, RnfE family APT61_RS12565 PF04205 FMN-binding domain APT61_RS12570 PF02508 Rnf-Nqr subunit, membrane protein APT61_RS12575 PF10576 Iron-sulfur binding domain of endonuclease III APT61_RS12575 PF00730 HhH-GPD superfamily base excision DNA repair protein APT61_RS12575 PF00633 Helix-hairpin-helix motif APT61_RS12580 PF00854 POT family APT61_RS12585 PF00043 Glutathione S-transferase, C-terminal domain APT61_RS12585 PF02798 Glutathione S-transferase, N-terminal domain APT61_RS12590 PF08543 Phosphomethylpyrimidine kinase APT61_RS12595 PF00579 tRNA synthetases class I (W and Y) APT61_RS12595 PF01479 S4 domain APT61_RS12600 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region APT61_RS12600 PF01243 Pyridoxamine 5'-phosphate oxidase APT61_RS12605 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme APT61_RS12610 PF03702 Anhydro-N-acetylmuramic acid kinase APT61_RS12615 PF05433 Glycine zipper 2TM domain APT61_RS12620 PF17158 Membrane-associated sensor, integral membrane domain APT61_RS12620 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS12625 PF01047 MarR family APT61_RS12630 PF07869 Protein of unknown function (DUF1656) APT61_RS12635 PF00529 HlyD membrane-fusion protein of T1SS APT61_RS12635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APT61_RS12640 PF04632 Fusaric acid resistance protein family APT61_RS12645 PF00080 Copper/zinc superoxide dismutase (SODC) APT61_RS12650 PF00248 Aldo/keto reductase family APT61_RS12660 PF00884 Sulfatase APT61_RS12660 PF08019 Phosphoethanolamine transferase EptA/EptB APT61_RS12665 PF00440 Bacterial regulatory proteins, tetR family APT61_RS12665 PF16925 Tetracyclin repressor-like, C-terminal domain APT61_RS12670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family APT61_RS12675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APT61_RS12680 PF00929 Exonuclease APT61_RS12685 PF00462 Glutaredoxin APT61_RS12690 PF00877 NlpC/P60 family APT61_RS12695 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain APT61_RS12695 PF02777 Iron/manganese superoxide dismutases, C-terminal domain APT61_RS12700 PF07690 Major Facilitator Superfamily APT61_RS12705 PF00356 Bacterial regulatory proteins, lacI family APT61_RS12710 PF03466 LysR substrate binding domain APT61_RS12710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS12715 PF07690 Major Facilitator Superfamily APT61_RS12725 PF00677 Lumazine binding domain APT61_RS12730 PF01554 MatE APT61_RS12755 PF12800 4Fe-4S binding domain APT61_RS12755 PF13247 4Fe-4S dicluster domain APT61_RS12760 PF01568 Molydopterin dinucleotide binding domain APT61_RS12760 PF00384 Molybdopterin oxidoreductase APT61_RS12760 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APT61_RS12765 PF13454 FAD-NAD(P)-binding APT61_RS12770 PF01425 Amidase APT61_RS12775 PF00815 Histidinol dehydrogenase APT61_RS12790 PF00356 Bacterial regulatory proteins, lacI family APT61_RS12795 PF07690 Major Facilitator Superfamily APT61_RS12800 PF00815 Histidinol dehydrogenase APT61_RS12810 PF00561 alpha/beta hydrolase fold APT61_RS12815 PF03328 HpcH/HpaI aldolase/citrate lyase family APT61_RS12825 PF00484 Carbonic anhydrase APT61_RS12840 PF00072 Response regulator receiver domain APT61_RS12840 PF00196 Bacterial regulatory proteins, luxR family APT61_RS12845 PF00512 His Kinase A (phospho-acceptor) domain APT61_RS12845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS12850 PF10965 Protein of unknown function (DUF2767) APT61_RS12855 PF03180 NLPA lipoprotein APT61_RS12860 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS12865 PF00005 ABC transporter APT61_RS12865 PF09383 NIL domain APT61_RS12870 PF02887 Pyruvate kinase, alpha/beta domain APT61_RS12870 PF00224 Pyruvate kinase, barrel domain APT61_RS12875 PF04728 Lipoprotein leucine-zipper APT61_RS12880 PF03734 L,D-transpeptidase catalytic domain APT61_RS12880 PF01476 LysM domain APT61_RS12880 PF17969 L,D-transpeptidase C-terminal domain APT61_RS12885 PF02657 Fe-S metabolism associated domain APT61_RS12890 PF00266 Aminotransferase class-V APT61_RS12895 PF01458 Uncharacterized protein family (UPF0051) APT61_RS12900 PF00005 ABC transporter APT61_RS12905 PF01458 Uncharacterized protein family (UPF0051) APT61_RS12910 PF01521 Iron-sulphur cluster biosynthesis APT61_RS12915 PF03061 Thioesterase superfamily APT61_RS12920 PF01565 FAD binding domain APT61_RS12920 PF13183 4Fe-4S dicluster domain APT61_RS12920 PF02913 FAD linked oxidases, C-terminal domain APT61_RS12925 PF01594 AI-2E family transporter APT61_RS12935 PF00391 PEP-utilising enzyme, mobile domain APT61_RS12935 PF02896 PEP-utilising enzyme, TIM barrel domain APT61_RS12935 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain APT61_RS12940 PF03618 Kinase/pyrophosphorylase APT61_RS12945 PF00793 DAHP synthetase I family APT61_RS12950 PF10636 Hemin uptake protein hemP APT61_RS12955 PF00593 TonB dependent receptor APT61_RS12955 PF07715 TonB-dependent Receptor Plug Domain APT61_RS12960 PF05171 Haemin-degrading HemS.ChuX domain APT61_RS12965 PF01497 Periplasmic binding protein APT61_RS12970 PF01032 FecCD transport family APT61_RS12975 PF00005 ABC transporter APT61_RS12980 PF02696 Uncharacterized ACR, YdiU/UPF0061 family APT61_RS12985 PF00563 EAL domain APT61_RS12990 PF00877 NlpC/P60 family APT61_RS12995 PF00005 ABC transporter APT61_RS13000 PF00255 Glutathione peroxidase APT61_RS13005 PF01032 FecCD transport family APT61_RS13010 PF00216 Bacterial DNA-binding protein APT61_RS13015 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain APT61_RS13015 PF03147 Ferredoxin-fold anticodon binding domain APT61_RS13015 PF03484 tRNA synthetase B5 domain APT61_RS13015 PF01588 Putative tRNA binding domain APT61_RS13015 PF03483 B3/4 domain APT61_RS13020 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain APT61_RS13020 PF01409 tRNA synthetases class II core domain (F) APT61_RS13025 PF00453 Ribosomal protein L20 APT61_RS13030 PF01632 Ribosomal protein L35 APT61_RS13035 PF05198 Translation initiation factor IF-3, N-terminal domain APT61_RS13035 PF00707 Translation initiation factor IF-3, C-terminal domain APT61_RS13040 PF03129 Anticodon binding domain APT61_RS13040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APT61_RS13040 PF02824 TGS domain APT61_RS13040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APT61_RS13050 PF04338 Protein of unknown function, DUF481 APT61_RS13055 PF00294 pfkB family carbohydrate kinase APT61_RS13060 PF11080 Endoribonuclease GhoS APT61_RS13065 PF03881 Fructosamine kinase APT61_RS13070 PF14002 YniB-like protein APT61_RS13075 PF13419 Haloacid dehalogenase-like hydrolase APT61_RS13085 PF04307 LexA-binding, inner membrane-associated putative hydrolase APT61_RS13090 PF00375 Sodium:dicarboxylate symporter family APT61_RS13095 PF10729 Cell division activator CedA APT61_RS13100 PF18011 C-terminal domain found in long catalases APT61_RS13100 PF00199 Catalase APT61_RS13100 PF06628 Catalase-related immune-responsive APT61_RS13105 PF04794 YdjC-like protein APT61_RS13110 PF11975 Family 4 glycosyl hydrolase C-terminal domain APT61_RS13110 PF02056 Family 4 glycosyl hydrolase APT61_RS13115 PF12833 Helix-turn-helix domain APT61_RS13115 PF07883 Cupin domain APT61_RS13120 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit APT61_RS13125 PF02378 Phosphotransferase system, EIIC APT61_RS13130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APT61_RS13135 PF04355 SmpA / OmlA family APT61_RS13140 PF02540 NAD synthase APT61_RS13150 PF05962 HutD APT61_RS13155 PF07813 LTXXQ motif family protein APT61_RS13160 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family APT61_RS13165 PF04996 Succinylarginine dihydrolase APT61_RS13170 PF00171 Aldehyde dehydrogenase family APT61_RS13175 PF04958 Arginine N-succinyltransferase beta subunit APT61_RS13180 PF00202 Aminotransferase class-III APT61_RS13185 PF03372 Endonuclease/Exonuclease/phosphatase family APT61_RS13195 PF13416 Bacterial extracellular solute-binding protein APT61_RS13200 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS13205 PF00005 ABC transporter APT61_RS13210 PF00581 Rhodanese-like domain APT61_RS13215 PF01066 CDP-alcohol phosphatidyltransferase APT61_RS13220 PF02627 Carboxymuconolactone decarboxylase family APT61_RS13225 PF00293 NUDIX domain APT61_RS13230 PF07383 Protein of unknown function (DUF1496) APT61_RS13235 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase APT61_RS13235 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain APT61_RS13240 PF01131 DNA topoisomerase APT61_RS13240 PF01751 Toprim domain APT61_RS13245 PF00586 AIR synthase related protein, N-terminal domain APT61_RS13245 PF02769 AIR synthase related protein, C-terminal domain APT61_RS13250 PF00881 Nitroreductase family APT61_RS13255 PF01343 Peptidase family S49 APT61_RS13260 PF17763 Glutaminase/Asparaginase C-terminal domain APT61_RS13260 PF00710 Asparaginase, N-terminal APT61_RS13265 PF00857 Isochorismatase family APT61_RS13270 PF07023 Protein of unknown function (DUF1315) APT61_RS13275 PF01641 SelR domain APT61_RS13280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain APT61_RS13280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APT61_RS13285 PF01263 Aldose 1-epimerase APT61_RS13290 PF00248 Aldo/keto reductase family APT61_RS13305 PF00313 'Cold-shock' DNA-binding domain APT61_RS13310 PF00313 'Cold-shock' DNA-binding domain APT61_RS13315 PF06165 Glycosyltransferase family 36 APT61_RS13315 PF10091 Putative glucoamylase APT61_RS13315 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain APT61_RS13345 PF06791 Prophage tail length tape measure protein APT61_RS13400 PF10548 P22AR C-terminal domain APT61_RS13400 PF08346 AntA/AntB antirepressor APT61_RS13425 PF06629 MltA-interacting protein MipA APT61_RS13430 PF08298 PrkA AAA domain APT61_RS13430 PF06798 PrkA serine protein kinase C-terminal domain APT61_RS13435 PF04285 Protein of unknown function (DUF444) APT61_RS13445 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS13450 PF04284 Protein of unknown function (DUF441) APT61_RS13455 PF12833 Helix-turn-helix domain APT61_RS13455 PF02311 AraC-like ligand binding domain APT61_RS13460 PF07690 Major Facilitator Superfamily APT61_RS13465 PF00117 Glutamine amidotransferase class-I APT61_RS13465 PF06418 CTP synthase N-terminus APT61_RS13470 PF04343 Protein of unknown function, DUF488 APT61_RS13480 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS13480 PF13185 GAF domain APT61_RS13485 PF04226 Transglycosylase associated protein APT61_RS13495 PF13181 Tetratricopeptide repeat APT61_RS13505 PF00529 HlyD membrane-fusion protein of T1SS APT61_RS13510 PF00664 ABC transporter transmembrane region APT61_RS13510 PF00005 ABC transporter APT61_RS13540 PF00563 EAL domain APT61_RS13540 PF04940 Sensors of blue-light using FAD APT61_RS13595 PF06791 Prophage tail length tape measure protein APT61_RS13635 PF00574 Clp protease APT61_RS13675 PF00959 Phage lysozyme APT61_RS13690 PF06147 Protein of unknown function (DUF968) APT61_RS13705 PF06183 DinI-like family APT61_RS13760 PF02082 Transcriptional regulator APT61_RS13765 PF12684 PDDEXK-like domain of unknown function (DUF3799) APT61_RS13765 PF06630 Enterobacterial exodeoxyribonuclease VIII APT61_RS13770 PF07825 Excisionase-like protein APT61_RS13775 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain APT61_RS13775 PF00589 Phage integrase family APT61_RS13780 PF00180 Isocitrate/isopropylmalate dehydrogenase APT61_RS13785 PF00849 RNA pseudouridylate synthase APT61_RS13790 PF00293 NUDIX domain APT61_RS13800 PF04356 Protein of unknown function (DUF489) APT61_RS13805 PF00206 Lyase APT61_RS13805 PF08328 Adenylosuccinate lyase C-terminal APT61_RS13810 PF00072 Response regulator receiver domain APT61_RS13810 PF00486 Transcriptional regulatory protein, C terminal APT61_RS13815 PF08918 PhoQ Sensor APT61_RS13815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS13820 PF08007 Cupin superfamily protein APT61_RS13825 PF07687 Peptidase dimerisation domain APT61_RS13825 PF01546 Peptidase family M20/M25/M40 APT61_RS13830 PF00005 ABC transporter APT61_RS13830 PF08402 TOBE domain APT61_RS13835 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS13840 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS13845 PF13416 Bacterial extracellular solute-binding protein APT61_RS13850 PF02146 Sir2 family APT61_RS13855 PF00480 ROK family APT61_RS13860 PF02687 FtsX-like permease family APT61_RS13860 PF12704 MacB-like periplasmic core domain APT61_RS13865 PF00005 ABC transporter APT61_RS13870 PF02687 FtsX-like permease family APT61_RS13870 PF12704 MacB-like periplasmic core domain APT61_RS13875 PF01757 Acyltransferase family APT61_RS13880 PF00271 Helicase conserved C-terminal domain APT61_RS13880 PF00270 DEAD/DEAH box helicase APT61_RS13880 PF03461 TRCF domain APT61_RS13880 PF02559 CarD-like/TRCF domain APT61_RS13880 PF17757 UvrB interaction domain APT61_RS13885 PF03734 L,D-transpeptidase catalytic domain APT61_RS13885 PF01476 LysM domain APT61_RS13885 PF17969 L,D-transpeptidase C-terminal domain APT61_RS13890 PF07338 Protein of unknown function (DUF1471) APT61_RS13895 PF00440 Bacterial regulatory proteins, tetR family APT61_RS13900 PF05433 Glycine zipper 2TM domain APT61_RS13905 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT61_RS13910 PF05728 Uncharacterised protein family (UPF0227) APT61_RS13915 PF00933 Glycosyl hydrolase family 3 N terminal domain APT61_RS13920 PF01636 Phosphotransferase enzyme family APT61_RS13925 PF13036 Peptidoglycan-synthase activator LpoB APT61_RS13930 PF07233 Protein of unknown function (DUF1425) APT61_RS13935 PF01230 HIT domain APT61_RS13940 PF07715 TonB-dependent Receptor Plug Domain APT61_RS13940 PF00593 TonB dependent receptor APT61_RS13945 PF02378 Phosphotransferase system, EIIC APT61_RS13945 PF00367 phosphotransferase system, EIIB APT61_RS13950 PF01026 TatD related DNase APT61_RS13955 PF09115 DNA polymerase III, delta subunit, C terminal APT61_RS13960 PF02223 Thymidylate kinase APT61_RS13965 PF02618 YceG-like family APT61_RS13970 PF01063 Amino-transferase class IV APT61_RS13975 PF00109 Beta-ketoacyl synthase, N-terminal domain APT61_RS13975 PF02801 Beta-ketoacyl synthase, C-terminal domain APT61_RS13980 PF00550 Phosphopantetheine attachment site APT61_RS13990 PF00698 Acyl transferase domain APT61_RS13995 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III APT61_RS13995 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal APT61_RS14000 PF02504 Fatty acid synthesis protein APT61_RS14005 PF01783 Ribosomal L32p protein family APT61_RS14010 PF02620 Large ribosomal RNA subunit accumulation protein YceD APT61_RS14015 PF02545 Maf-like protein APT61_RS14020 PF01479 S4 domain APT61_RS14020 PF00849 RNA pseudouridylate synthase APT61_RS14025 PF00575 S1 RNA binding domain APT61_RS14025 PF12111 Polyribonucleotide phosphorylase C terminal APT61_RS14025 PF10150 Ribonuclease E/G family APT61_RS14030 PF03466 LysR substrate binding domain APT61_RS14030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS14035 PF07690 Major Facilitator Superfamily APT61_RS14040 PF00669 Bacterial flagellin N-terminal helical region APT61_RS14045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal APT61_RS14045 PF00460 Flagella basal body rod protein APT61_RS14050 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase APT61_RS14050 PF10135 Rod binding protein APT61_RS14055 PF02119 Flagellar P-ring protein APT61_RS14060 PF02107 Flagellar L-ring protein APT61_RS14065 PF06429 Flagellar basal body rod FlgEFG protein C-terminal APT61_RS14065 PF00460 Flagella basal body rod protein APT61_RS14070 PF00460 Flagella basal body rod protein APT61_RS14070 PF06429 Flagellar basal body rod FlgEFG protein C-terminal APT61_RS14075 PF06429 Flagellar basal body rod FlgEFG protein C-terminal APT61_RS14075 PF07559 Flagellar basal body protein FlaE APT61_RS14075 PF00460 Flagella basal body rod protein APT61_RS14080 PF13861 FlgD Tudor-like domain APT61_RS14080 PF03963 Flagellar hook capping protein - N-terminal region APT61_RS14080 PF13860 FlgD Ig-like domain APT61_RS14085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal APT61_RS14085 PF00460 Flagella basal body rod protein APT61_RS14090 PF00460 Flagella basal body rod protein APT61_RS14095 PF13144 Chaperone for flagella basal body P-ring formation APT61_RS14100 PF04316 Anti-sigma-28 factor, FlgM APT61_RS14105 PF05130 FlgN protein APT61_RS14110 PF03023 Lipid II flippase MurJ APT61_RS14115 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APT61_RS14120 PF04337 Protein of unknown function, DUF480 APT61_RS14125 PF13302 Acetyltransferase (GNAT) domain APT61_RS14130 PF07690 Major Facilitator Superfamily APT61_RS14135 PF07273 Protein of unknown function (DUF1439) APT61_RS14140 PF01979 Amidohydrolase family APT61_RS14145 PF06183 DinI-like family APT61_RS14150 PF13991 BssS protein family APT61_RS14155 PF01266 FAD dependent oxidoreductase APT61_RS14160 PF01292 Prokaryotic cytochrome b561 APT61_RS14165 PF04264 YceI-like domain APT61_RS14170 PF17773 UPF0176 acylphosphatase like domain APT61_RS14170 PF12368 Rhodanase C-terminal APT61_RS14170 PF00581 Rhodanese-like domain APT61_RS14175 PF03279 Bacterial lipid A biosynthesis acyltransferase APT61_RS14180 PF07690 Major Facilitator Superfamily APT61_RS14185 PF13984 MsyB protein APT61_RS14190 PF07119 Protein of unknown function (DUF1375) APT61_RS14195 PF00535 Glycosyl transferase family 2 APT61_RS14200 PF04349 Periplasmic glucan biosynthesis protein, MdoG APT61_RS14205 PF01757 Acyltransferase family APT61_RS14210 PF13091 PLD-like domain APT61_RS14215 PF01661 Macro domain APT61_RS14225 PF07012 Curlin associated repeat APT61_RS14235 PF00196 Bacterial regulatory proteins, luxR family APT61_RS14240 PF10627 Curli assembly protein CsgE APT61_RS14245 PF10614 Type VIII secretion system (T8SS), CsgF protein APT61_RS14250 PF03783 Curli production assembly/transport component CsgG APT61_RS14255 PF06496 Protein of unknown function (DUF1097) APT61_RS14260 PF02613 Nitrate reductase delta subunit APT61_RS14265 PF02811 PHP domain APT61_RS14270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APT61_RS14300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS14300 PF03466 LysR substrate binding domain APT61_RS14305 PF02678 Pirin APT61_RS14305 PF05726 Pirin C-terminal cupin domain APT61_RS14310 PF00857 Isochorismatase family APT61_RS14335 PF02562 PhoH-like protein APT61_RS14340 PF04261 Dyp-type peroxidase family APT61_RS14345 PF13473 Cupredoxin-like domain APT61_RS14345 PF09375 Imelysin APT61_RS14350 PF03239 Iron permease FTR1 family APT61_RS14355 PF01773 Na+ dependent nucleoside transporter N-terminus APT61_RS14355 PF07670 Nucleoside recognition APT61_RS14355 PF07662 Na+ dependent nucleoside transporter C-terminus APT61_RS14365 PF00474 Sodium:solute symporter family APT61_RS14370 PF14850 DNA-binding domain of Proline dehydrogenase APT61_RS14370 PF01619 Proline dehydrogenase APT61_RS14370 PF18327 Proline utilization A proline dehydrogenase N-terminal domain APT61_RS14370 PF00171 Aldehyde dehydrogenase family APT61_RS14380 PF00440 Bacterial regulatory proteins, tetR family APT61_RS14380 PF08362 YcdC-like protein, C-terminal region APT61_RS14385 PF00296 Luciferase-like monooxygenase APT61_RS14390 PF00857 Isochorismatase family APT61_RS14395 PF01042 Endoribonuclease L-PSP APT61_RS14400 PF12697 Alpha/beta hydrolase family APT61_RS14405 PF00881 Nitroreductase family APT61_RS14410 PF01613 Flavin reductase like domain APT61_RS14415 PF00860 Permease family APT61_RS14430 PF03358 NADPH-dependent FMN reductase APT61_RS14435 PF13993 YccJ-like protein APT61_RS14445 PF00328 Histidine phosphatase superfamily (branch 2) APT61_RS14450 PF01638 HxlR-like helix-turn-helix APT61_RS14455 PF00563 EAL domain APT61_RS14455 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS14455 PF13188 PAS domain APT61_RS14455 PF03707 Bacterial signalling protein N terminal repeat APT61_RS14480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS14480 PF03466 LysR substrate binding domain APT61_RS14485 PF08502 LeuA allosteric (dimerisation) domain APT61_RS14485 PF00682 HMGL-like APT61_RS14490 PF12833 Helix-turn-helix domain APT61_RS14490 PF02311 AraC-like ligand binding domain APT61_RS14530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APT61_RS14530 PF01568 Molydopterin dinucleotide binding domain APT61_RS14530 PF00384 Molybdopterin oxidoreductase APT61_RS14535 PF03916 Polysulphide reductase, NrfD APT61_RS14540 PF13247 4Fe-4S dicluster domain APT61_RS14545 PF00512 His Kinase A (phospho-acceptor) domain APT61_RS14545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS14550 PF00196 Bacterial regulatory proteins, luxR family APT61_RS14550 PF00072 Response regulator receiver domain APT61_RS14555 PF00144 Beta-lactamase APT61_RS14560 PF01494 FAD binding domain APT61_RS14565 PF01323 DSBA-like thioredoxin domain APT61_RS14570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS14570 PF03466 LysR substrate binding domain APT61_RS14575 PF00724 NADH:flavin oxidoreductase / NADH oxidase family APT61_RS14580 PF00356 Bacterial regulatory proteins, lacI family APT61_RS14585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APT61_RS14595 PF03611 PTS system sugar-specific permease component APT61_RS14600 PF00834 Ribulose-phosphate 3 epimerase family APT61_RS14610 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APT61_RS14625 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS14630 PF00005 ABC transporter APT61_RS14630 PF08402 TOBE domain APT61_RS14640 PF00459 Inositol monophosphatase family APT61_RS14645 PF00356 Bacterial regulatory proteins, lacI family APT61_RS14660 PF02264 LamB porin APT61_RS14670 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain APT61_RS14670 PF04616 Glycosyl hydrolases family 43 APT61_RS14675 PF07690 Major Facilitator Superfamily APT61_RS14680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APT61_RS14680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APT61_RS14685 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APT61_RS14685 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase APT61_RS14690 PF00356 Bacterial regulatory proteins, lacI family APT61_RS14700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APT61_RS14705 PF01027 Inhibitor of apoptosis-promoting Bax1 APT61_RS14710 PF04358 DsrC like protein APT61_RS14715 PF00708 Acylphosphatase APT61_RS14720 PF17785 PUA-like domain APT61_RS14720 PF10672 S-adenosylmethionine-dependent methyltransferase APT61_RS14725 PF08755 Hemimethylated DNA-binding protein YccV like APT61_RS14730 PF13380 CoA binding domain APT61_RS14735 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) APT61_RS14740 PF02142 MGS-like domain APT61_RS14745 PF13361 UvrD-like helicase C-terminal domain APT61_RS14745 PF12462 DNA helicase IV / RNA helicase N terminal APT61_RS14745 PF00580 UvrD/REP helicase N-terminal domain APT61_RS14750 PF03733 Inner membrane component domain APT61_RS14755 PF12805 FUSC-like inner membrane protein yccS APT61_RS14760 PF04994 TfoX C-terminal domain APT61_RS14760 PF04993 TfoX N-terminal domain APT61_RS14765 PF03846 Cell division inhibitor SulA APT61_RS14770 PF01389 OmpA-like transmembrane domain APT61_RS14770 PF00691 OmpA family APT61_RS14775 PF17414 MatP C-terminal ribbon-helix-helix domain APT61_RS14775 PF06303 MatP N-terminal domain APT61_RS14780 PF13654 AAA domain APT61_RS14780 PF05362 Lon protease (S16) C-terminal proteolytic domain APT61_RS14785 PF07977 FabA-like domain APT61_RS14790 PF03886 ABC-type transport auxiliary lipoprotein component APT61_RS14795 PF02470 MlaD protein APT61_RS14800 PF04403 Paraquat-inducible protein A APT61_RS14805 PF16326 ABC transporter C-terminal domain APT61_RS14805 PF00005 ABC transporter APT61_RS14805 PF12848 ABC transporter APT61_RS14810 PF10672 S-adenosylmethionine-dependent methyltransferase APT61_RS14810 PF02926 THUMP domain APT61_RS14810 PF01170 Putative RNA methylase family UPF0020 APT61_RS14815 PF03476 MOSC N-terminal beta barrel domain APT61_RS14815 PF03473 MOSC domain APT61_RS14815 PF00111 2Fe-2S iron-sulfur cluster binding domain APT61_RS14820 PF07126 Cell-division protein ZapC APT61_RS14825 PF01180 Dihydroorotate dehydrogenase APT61_RS14830 PF03358 NADPH-dependent FMN reductase APT61_RS14835 PF09084 NMT1/THI5 like APT61_RS14840 PF00296 Luciferase-like monooxygenase APT61_RS14845 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS14850 PF00005 ABC transporter APT61_RS14855 PF11940 Domain of unknown function (DUF3458) Ig-like fold APT61_RS14855 PF17432 Domain of unknown function (DUF3458_C) ARM repeats APT61_RS14855 PF01433 Peptidase family M1 domain APT61_RS14860 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain APT61_RS14860 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family APT61_RS14865 PF01336 OB-fold nucleic acid binding domain APT61_RS14865 PF00152 tRNA synthetases class II (D, K and N) APT61_RS14870 PF00267 Gram-negative porin APT61_RS14875 PF00155 Aminotransferase class I and II APT61_RS14880 PF00753 Metallo-beta-lactamase superfamily APT61_RS14885 PF05951 Bacterial protein of unknown function (DUF882) APT61_RS14890 PF03734 L,D-transpeptidase catalytic domain APT61_RS14890 PF01471 Putative peptidoglycan binding domain APT61_RS14895 PF04310 MukB N-terminal APT61_RS14895 PF16330 MukB hinge domain APT61_RS14900 PF04288 MukE-like family APT61_RS14905 PF17193 MukF C-terminal domain APT61_RS14905 PF17192 MukF middle domain APT61_RS14905 PF03882 MukF winged-helix domain APT61_RS14910 PF13847 Methyltransferase domain APT61_RS14915 PF02698 DUF218 domain APT61_RS14920 PF01636 Phosphotransferase enzyme family APT61_RS14925 PF02348 Cytidylyltransferase APT61_RS14930 PF03966 Trm112p-like protein APT61_RS14935 PF06224 Winged helix DNA-binding domain APT61_RS14940 PF02606 Tetraacyldisaccharide-1-P 4'-kinase APT61_RS14945 PF00664 ABC transporter transmembrane region APT61_RS14945 PF00005 ABC transporter APT61_RS14950 PF03772 Competence protein APT61_RS14950 PF00753 Metallo-beta-lactamase superfamily APT61_RS14955 PF00216 Bacterial DNA-binding protein APT61_RS14960 PF00575 S1 RNA binding domain APT61_RS14965 PF02224 Cytidylate kinase APT61_RS14970 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APT61_RS14975 PF00266 Aminotransferase class-V APT61_RS14980 PF04239 Protein of unknown function (DUF421) APT61_RS14985 PF18381 YcaO cyclodehydratase C-terminal domain APT61_RS14985 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding APT61_RS14990 PF01226 Formate/nitrite transporter APT61_RS14995 PF01228 Glycine radical APT61_RS14995 PF02901 Pyruvate formate lyase-like APT61_RS15000 PF04055 Radical SAM superfamily APT61_RS15010 PF07690 Major Facilitator Superfamily APT61_RS15015 PF04976 DMSO reductase anchor subunit (DmsC) APT61_RS15020 PF12800 4Fe-4S binding domain APT61_RS15020 PF13247 4Fe-4S dicluster domain APT61_RS15025 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APT61_RS15025 PF00384 Molybdopterin oxidoreductase APT61_RS15025 PF01568 Molydopterin dinucleotide binding domain APT61_RS15030 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APT61_RS15030 PF02403 Seryl-tRNA synthetase N-terminal domain APT61_RS15035 PF00004 ATPase family associated with various cellular activities (AAA) APT61_RS15035 PF16193 AAA C-terminal domain APT61_RS15035 PF12002 MgsA AAA+ ATPase C terminal APT61_RS15040 PF03548 Outer membrane lipoprotein carrier protein LolA APT61_RS15045 PF13491 4TM region of DNA translocase FtsK/SpoIIIE APT61_RS15045 PF17854 FtsK alpha domain APT61_RS15045 PF09397 Ftsk gamma domain APT61_RS15045 PF01580 FtsK/SpoIIIE family APT61_RS15050 PF01037 Lrp/AsnC ligand binding domain APT61_RS15055 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT61_RS15060 PF00664 ABC transporter transmembrane region APT61_RS15060 PF00005 ABC transporter APT61_RS15065 PF00005 ABC transporter APT61_RS15065 PF00664 ABC transporter transmembrane region APT61_RS15070 PF03588 Leucyl/phenylalanyl-tRNA protein transferase APT61_RS15075 PF01176 Translation initiation factor 1A / IF-1 APT61_RS15085 PF10431 C-terminal, D2-small domain, of ClpB protein APT61_RS15085 PF02861 Clp amino terminal domain, pathogenicity island component APT61_RS15085 PF00004 ATPase family associated with various cellular activities (AAA) APT61_RS15085 PF07724 AAA domain (Cdc48 subfamily) APT61_RS15085 PF17871 AAA lid domain APT61_RS15090 PF02617 ATP-dependent Clp protease adaptor protein ClpS APT61_RS15095 PF00313 'Cold-shock' DNA-binding domain APT61_RS15100 PF00005 ABC transporter APT61_RS15100 PF12704 MacB-like periplasmic core domain APT61_RS15100 PF02687 FtsX-like permease family APT61_RS15105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APT61_RS15110 PF04393 Protein of unknown function (DUF535) APT61_RS15115 PF11398 Protein of unknown function (DUF2813) APT61_RS15120 PF00230 Major intrinsic protein APT61_RS15125 PF03956 Lysine exporter LysO APT61_RS15130 PF03063 Prismane/CO dehydrogenase family APT61_RS15135 PF00970 Oxidoreductase FAD-binding domain APT61_RS15135 PF00111 2Fe-2S iron-sulfur cluster binding domain APT61_RS15135 PF00175 Oxidoreductase NAD-binding domain APT61_RS15145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APT61_RS15145 PF00205 Thiamine pyrophosphate enzyme, central domain APT61_RS15145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APT61_RS15150 PF01212 Beta-eliminating lyase APT61_RS15155 PF11066 Protein of unknown function (DUF2867) APT61_RS15155 PF13460 NAD(P)H-binding APT61_RS15160 PF01370 NAD dependent epimerase/dehydratase family APT61_RS15165 PF01464 Transglycosylase SLT domain APT61_RS15170 PF00704 Glycosyl hydrolases family 18 APT61_RS15170 PF08329 Chitinase A, N-terminal domain APT61_RS15175 PF06750 Bacterial Peptidase A24 N-terminal domain APT61_RS15175 PF01478 Type IV leader peptidase family APT61_RS15190 PF03934 Type II secretion system (T2SS), protein K APT61_RS15195 PF07963 Prokaryotic N-terminal methylation motif APT61_RS15195 PF11612 Type II secretion system (T2SS), protein J APT61_RS15200 PF07963 Prokaryotic N-terminal methylation motif APT61_RS15200 PF02501 Type II secretion system (T2SS), protein I APT61_RS15205 PF07963 Prokaryotic N-terminal methylation motif APT61_RS15210 PF07963 Prokaryotic N-terminal methylation motif APT61_RS15210 PF08334 Type II secretion system (T2SS), protein G APT61_RS15215 PF00482 Type II secretion system (T2SS), protein F APT61_RS15220 PF00437 Type II/IV secretion system protein APT61_RS15225 PF03958 Bacterial type II/III secretion system short domain APT61_RS15225 PF00263 Bacterial type II and III secretion system protein APT61_RS15230 PF11356 Type II secretion system protein C APT61_RS15250 PF01510 N-acetylmuramoyl-L-alanine amidase APT61_RS15255 PF01906 Putative heavy-metal-binding APT61_RS15260 PF12883 Protein of unknown function (DUF3828) APT61_RS15265 PF00005 ABC transporter APT61_RS15270 PF00497 Bacterial extracellular solute-binding proteins, family 3 APT61_RS15275 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS15280 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS15285 PF00497 Bacterial extracellular solute-binding proteins, family 3 APT61_RS15290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS15290 PF00512 His Kinase A (phospho-acceptor) domain APT61_RS15290 PF00989 PAS fold APT61_RS15290 PF16736 Single Cache-like APT61_RS15295 PF00072 Response regulator receiver domain APT61_RS15295 PF00486 Transcriptional regulatory protein, C terminal APT61_RS15300 PF05958 tRNA (Uracil-5-)-methyltransferase APT61_RS15305 PF10767 Protein of unknown function (DUF2593) APT61_RS15310 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS15315 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS15320 PF08402 TOBE domain APT61_RS15320 PF00005 ABC transporter APT61_RS15325 PF13416 Bacterial extracellular solute-binding protein APT61_RS15330 PF10722 Putative bacterial sensory transduction regulator APT61_RS15335 PF08443 RimK-like ATP-grasp domain APT61_RS15335 PF18030 RimK PreATP-grasp domain APT61_RS15340 PF00881 Nitroreductase family APT61_RS15345 PF00462 Glutaredoxin APT61_RS15350 PF11045 Putative inner membrane protein of Enterobacteriaceae APT61_RS15355 PF02080 TrkA-C domain APT61_RS15355 PF06826 Predicted Permease Membrane Region APT61_RS15365 PF04116 Fatty acid hydroxylase superfamily APT61_RS15375 PF01593 Flavin containing amine oxidoreductase APT61_RS15385 PF01070 FMN-dependent dehydrogenase APT61_RS15390 PF00348 Polyprenyl synthetase APT61_RS15410 PF00440 Bacterial regulatory proteins, tetR family APT61_RS15415 PF07690 Major Facilitator Superfamily APT61_RS15425 PF07690 Major Facilitator Superfamily APT61_RS15435 PF01569 PAP2 superfamily APT61_RS15440 PF00455 DeoR C terminal sensor domain APT61_RS15440 PF08220 DeoR-like helix-turn-helix domain APT61_RS15445 PF00768 D-alanyl-D-alanine carboxypeptidase APT61_RS15445 PF07943 Penicillin-binding protein 5, C-terminal domain APT61_RS15450 PF00043 Glutathione S-transferase, C-terminal domain APT61_RS15450 PF13417 Glutathione S-transferase, N-terminal domain APT61_RS15455 PF07995 Glucose / Sorbosone dehydrogenase APT61_RS15460 PF10799 Biofilm formation protein (YliH/bssR) APT61_RS15465 PF04055 Radical SAM superfamily APT61_RS15465 PF00919 Uncharacterized protein family UPF0004 APT61_RS15465 PF18693 TRAM domain APT61_RS15470 PF01380 SIS domain APT61_RS15475 PF01380 SIS domain APT61_RS15480 PF03613 PTS system mannose/fructose/sorbose family IID component APT61_RS15485 PF03609 PTS system sorbose-specific iic component APT61_RS15490 PF03830 PTS system sorbose subfamily IIB component APT61_RS15500 PF00874 PRD domain APT61_RS15500 PF00158 Sigma-54 interaction domain APT61_RS15515 PF01011 PQQ enzyme repeat APT61_RS15515 PF13360 PQQ-like domain APT61_RS15525 PF00881 Nitroreductase family APT61_RS15535 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS15535 PF12911 N-terminal TM domain of oligopeptide transport permease C APT61_RS15540 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS15545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APT61_RS15550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APT61_RS15550 PF00005 ABC transporter APT61_RS15555 PF01112 Asparaginase APT61_RS15560 PF00994 Probable molybdopterin binding domain APT61_RS15560 PF03453 MoeA N-terminal region (domain I and II) APT61_RS15560 PF03454 MoeA C-terminal region (domain IV) APT61_RS15565 PF00899 ThiF family APT61_RS15570 PF00923 Transaldolase/Fructose-6-phosphate aldolase APT61_RS15575 PF04055 Radical SAM superfamily APT61_RS15580 PF02901 Pyruvate formate lyase-like APT61_RS15580 PF01228 Glycine radical APT61_RS15590 PF07350 Protein of unknown function (DUF1479) APT61_RS15595 PF00005 ABC transporter APT61_RS15595 PF12848 ABC transporter APT61_RS15600 PF17969 L,D-transpeptidase C-terminal domain APT61_RS15600 PF03734 L,D-transpeptidase catalytic domain APT61_RS15605 PF00248 Aldo/keto reductase family APT61_RS15610 PF02321 Outer membrane efflux protein APT61_RS15615 PF07690 Major Facilitator Superfamily APT61_RS15620 PF00529 HlyD membrane-fusion protein of T1SS APT61_RS15620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APT61_RS15625 PF03600 Citrate transporter APT61_RS15630 PF02742 Iron dependent repressor, metal binding and dimerisation domain APT61_RS15630 PF01325 Iron dependent repressor, N-terminal DNA binding domain APT61_RS15640 PF00884 Sulfatase APT61_RS15645 PF13505 Outer membrane protein beta-barrel domain APT61_RS15650 PF00892 EamA-like transporter family APT61_RS15655 PF00210 Ferritin-like domain APT61_RS15660 PF00497 Bacterial extracellular solute-binding proteins, family 3 APT61_RS15665 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS15670 PF00005 ABC transporter APT61_RS15675 PF00924 Mechanosensitive ion channel APT61_RS15680 PF05971 RNA methyltransferase APT61_RS15685 PF07338 Protein of unknown function (DUF1471) APT61_RS15690 PF00593 TonB dependent receptor APT61_RS15690 PF07715 TonB-dependent Receptor Plug Domain APT61_RS15695 PF18331 PKHD-type hydroxylase C-terminal domain APT61_RS15695 PF13640 2OG-Fe(II) oxygenase superfamily APT61_RS15700 PF01258 Prokaryotic dksA/traR C4-type zinc finger APT61_RS15705 PF07338 Protein of unknown function (DUF1471) APT61_RS15710 PF02885 Glycosyl transferase family, helical bundle domain APT61_RS15715 PF00419 Fimbrial protein APT61_RS15720 PF02753 Pili assembly chaperone PapD, C-terminal domain APT61_RS15720 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain APT61_RS15725 PF13953 PapC C-terminal domain APT61_RS15725 PF00577 Outer membrane usher protein APT61_RS15725 PF13954 PapC N-terminal domain APT61_RS15740 PF06733 DEAD_2 APT61_RS15740 PF00270 DEAD/DEAH box helicase APT61_RS15740 PF13307 Helicase C-terminal domain APT61_RS15745 PF00271 Helicase conserved C-terminal domain APT61_RS15745 PF00270 DEAD/DEAH box helicase APT61_RS15750 PF09209 Tetracyclin repressor-like, C-terminal domain APT61_RS15750 PF00440 Bacterial regulatory proteins, tetR family APT61_RS15755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APT61_RS15760 PF00005 ABC transporter APT61_RS15775 PF11076 Putative inner membrane protein YbhQ APT61_RS15780 PF03372 Endonuclease/Exonuclease/phosphatase family APT61_RS15785 PF13091 PLD-like domain APT61_RS15790 PF03706 Lysylphosphatidylglycerol synthase TM region APT61_RS15795 PF01027 Inhibitor of apoptosis-promoting Bax1 APT61_RS15800 PF02391 MoaE protein APT61_RS15805 PF02597 ThiS family APT61_RS15810 PF01967 MoaC family APT61_RS15815 PF00994 Probable molybdopterin binding domain APT61_RS15820 PF06463 Molybdenum Cofactor Synthesis C APT61_RS15820 PF04055 Radical SAM superfamily APT61_RS15825 PF01933 Uncharacterised protein family UPF0052 APT61_RS15830 PF00271 Helicase conserved C-terminal domain APT61_RS15830 PF17757 UvrB interaction domain APT61_RS15830 PF12344 Ultra-violet resistance protein B APT61_RS15830 PF04851 Type III restriction enzyme, res subunit APT61_RS15830 PF02151 UvrB/uvrC motif APT61_RS15835 PF00005 ABC transporter APT61_RS15845 PF08241 Methyltransferase domain APT61_RS15850 PF00155 Aminotransferase class I and II APT61_RS15855 PF04055 Radical SAM superfamily APT61_RS15855 PF06968 Biotin and Thiamin Synthesis associated domain APT61_RS15860 PF00202 Aminotransferase class-III APT61_RS15865 PF01161 Phosphatidylethanolamine-binding protein APT61_RS15870 PF00221 Aromatic amino acid lyase APT61_RS15875 PF17392 Urocanase C-terminal domain APT61_RS15875 PF01175 Urocanase Rossmann-like domain APT61_RS15875 PF17391 Urocanase N-terminal domain APT61_RS15880 PF07702 UTRA domain APT61_RS15880 PF00392 Bacterial regulatory proteins, gntR family APT61_RS15885 PF00491 Arginase family APT61_RS15890 PF01979 Amidohydrolase family APT61_RS15895 PF01095 Pectinesterase APT61_RS15900 PF10282 Lactonase, 7-bladed beta-propeller APT61_RS15910 PF03459 TOBE domain APT61_RS15910 PF00005 ABC transporter APT61_RS15915 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS15925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS15925 PF03459 TOBE domain APT61_RS15930 PF00005 ABC transporter APT61_RS15935 PF16363 GDP-mannose 4,6 dehydratase APT61_RS15940 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain APT61_RS15940 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain APT61_RS15945 PF00288 GHMP kinases N terminal domain APT61_RS15945 PF08544 GHMP kinases C terminal APT61_RS15945 PF10509 Galactokinase galactose-binding signature APT61_RS15950 PF01263 Aldose 1-epimerase APT61_RS15955 PF00300 Histidine phosphatase superfamily (branch 1) APT61_RS15960 PF00793 DAHP synthetase I family APT61_RS15965 PF13985 YbgS-like protein APT61_RS15970 PF01545 Cation efflux family APT61_RS15975 PF04973 Nicotinamide mononucleotide transporter APT61_RS15980 PF02445 Quinolinate synthetase A protein APT61_RS16020 PF16331 TolA binding protein trimerisation APT61_RS16020 PF13174 Tetratricopeptide repeat APT61_RS16025 PF00691 OmpA family APT61_RS16030 PF04052 TolB amino-terminal domain APT61_RS16030 PF07676 WD40-like Beta Propeller Repeat APT61_RS16035 PF06519 TolA C-terminal APT61_RS16040 PF02472 Biopolymer transport protein ExbD/TolR APT61_RS16045 PF01618 MotA/TolQ/ExbB proton channel family APT61_RS16050 PF03061 Thioesterase superfamily APT61_RS16055 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) APT61_RS16060 PF08173 Membrane bound YbgT-like protein APT61_RS16065 PF02322 Cytochrome bd terminal oxidase subunit II APT61_RS16070 PF01654 Cytochrome bd terminal oxidase subunit I APT61_RS16075 PF01074 Glycosyl hydrolases family 38 N-terminal domain APT61_RS16075 PF07748 Glycosyl hydrolases family 38 C-terminal domain APT61_RS16075 PF09261 Alpha mannosidase middle domain APT61_RS16080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APT61_RS16080 PF02378 Phosphotransferase system, EIIC APT61_RS16080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APT61_RS16085 PF00392 Bacterial regulatory proteins, gntR family APT61_RS16085 PF07702 UTRA domain APT61_RS16090 PF00549 CoA-ligase APT61_RS16090 PF02629 CoA binding domain APT61_RS16095 PF08442 ATP-grasp domain APT61_RS16095 PF00549 CoA-ligase APT61_RS16100 PF00364 Biotin-requiring enzyme APT61_RS16100 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APT61_RS16100 PF02817 e3 binding domain APT61_RS16105 PF16078 2-oxoglutarate dehydrogenase N-terminus APT61_RS16105 PF00676 Dehydrogenase E1 component APT61_RS16105 PF02779 Transketolase, pyrimidine binding domain APT61_RS16105 PF16870 2-oxoglutarate dehydrogenase C-terminal APT61_RS16110 PF13085 2Fe-2S iron-sulfur cluster binding domain APT61_RS16115 PF00890 FAD binding domain APT61_RS16115 PF02910 Fumarate reductase flavoprotein C-term APT61_RS16120 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit APT61_RS16125 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit APT61_RS16130 PF00285 Citrate synthase, C-terminal domain APT61_RS16135 PF06827 Zinc finger found in FPG and IleRS APT61_RS16135 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain APT61_RS16135 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain APT61_RS16140 PF01470 Pyroglutamyl peptidase APT61_RS16155 PF03746 LamB/YcsF family APT61_RS16160 PF02626 Carboxyltransferase domain, subdomain A and B APT61_RS16165 PF02682 Carboxyltransferase domain, subdomain C and D APT61_RS16170 PF01784 NIF3 (NGG1p interacting factor 3) APT61_RS16175 PF00875 DNA photolyase APT61_RS16175 PF03441 FAD binding domain of DNA photolyase APT61_RS16180 PF10725 Protein of unknown function (DUF2517) APT61_RS16190 PF03814 Potassium-transporting ATPase A subunit APT61_RS16200 PF02669 K+-transporting ATPase, c chain APT61_RS16205 PF02702 Osmosensitive K+ channel His kinase sensor domain APT61_RS16205 PF00512 His Kinase A (phospho-acceptor) domain APT61_RS16205 PF13493 Domain of unknown function (DUF4118) APT61_RS16205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS16205 PF13492 GAF domain APT61_RS16210 PF00486 Transcriptional regulatory protein, C terminal APT61_RS16210 PF00072 Response regulator receiver domain APT61_RS16215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APT61_RS16215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APT61_RS16215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APT61_RS16215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APT61_RS16220 PF03925 SeqA protein C-terminal domain APT61_RS16220 PF17206 SeqA protein N-terminal domain APT61_RS16225 PF12697 Alpha/beta hydrolase family APT61_RS16230 PF01402 Ribbon-helix-helix protein, copG family APT61_RS16235 PF00258 Flavodoxin APT61_RS16240 PF01475 Ferric uptake regulator family APT61_RS16245 PF13982 YbfN-like lipoprotein APT61_RS16250 PF03573 outer membrane porin, OprD family APT61_RS16255 PF00749 tRNA synthetases class I (E and Q), catalytic domain APT61_RS16255 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain APT61_RS16260 PF02378 Phosphotransferase system, EIIC APT61_RS16260 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 APT61_RS16260 PF00367 phosphotransferase system, EIIB APT61_RS16265 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase APT61_RS16270 PF01979 Amidohydrolase family APT61_RS16275 PF01047 MarR family APT61_RS16275 PF00480 ROK family APT61_RS16280 PF13344 Haloacid dehalogenase-like hydrolase APT61_RS16285 PF00733 Asparagine synthase APT61_RS16285 PF13537 Glutamine amidotransferase domain APT61_RS16325 PF01494 FAD binding domain APT61_RS16330 PF00919 Uncharacterized protein family UPF0004 APT61_RS16330 PF01938 TRAM domain APT61_RS16330 PF04055 Radical SAM superfamily APT61_RS16335 PF02562 PhoH-like protein APT61_RS16340 PF02130 Uncharacterized protein family UPF0054 APT61_RS16345 PF03471 Transporter associated domain APT61_RS16345 PF00571 CBS domain APT61_RS16350 PF00795 Carbon-nitrogen hydrolase APT61_RS16355 PF00497 Bacterial extracellular solute-binding proteins, family 3 APT61_RS16360 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS16365 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS16370 PF00005 ABC transporter APT61_RS16375 PF01156 Inosine-uridine preferring nucleoside hydrolase APT61_RS16380 PF07295 Zinc-ribbon containing domain APT61_RS16385 PF00133 tRNA synthetases class I (I, L, M and V) APT61_RS16385 PF08264 Anticodon-binding domain of tRNA APT61_RS16385 PF13603 Leucyl-tRNA synthetase, Domain 2 APT61_RS16390 PF04390 Lipopolysaccharide-assembly APT61_RS16395 PF06144 DNA polymerase III, delta subunit APT61_RS16395 PF14840 Processivity clamp loader gamma complex DNA pol III C-term APT61_RS16400 PF01467 Cytidylyltransferase-like APT61_RS16410 PF02590 Predicted SPOUT methyltransferase APT61_RS16415 PF00905 Penicillin binding protein transpeptidase domain APT61_RS16415 PF03717 Penicillin-binding Protein dimerisation domain APT61_RS16420 PF01098 Cell cycle protein APT61_RS16425 PF03330 Lytic transglycolase APT61_RS16425 PF05036 Sporulation related domain APT61_RS16430 PF07943 Penicillin-binding protein 5, C-terminal domain APT61_RS16430 PF00768 D-alanyl-D-alanine carboxypeptidase APT61_RS16435 PF04359 Protein of unknown function (DUF493) APT61_RS16440 PF03099 Biotin/lipoate A/B protein ligase family APT61_RS16445 PF03466 LysR substrate binding domain APT61_RS16445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS16450 PF04055 Radical SAM superfamily APT61_RS16450 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family APT61_RS16455 PF02416 mttA/Hcf106 family APT61_RS16460 PF00795 Carbon-nitrogen hydrolase APT61_RS16465 PF02537 CrcB-like protein, Camphor Resistance (CrcB) APT61_RS16470 PF00313 'Cold-shock' DNA-binding domain APT61_RS16475 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP APT61_RS16480 PF03606 C4-dicarboxylate anaerobic carrier APT61_RS16485 PF00445 Ribonuclease T2 family APT61_RS16490 PF01613 Flavin reductase like domain APT61_RS16495 PF14760 Rnk N-terminus APT61_RS16495 PF01272 Transcription elongation factor, GreA/GreB, C-term APT61_RS16500 PF00107 Zinc-binding dehydrogenase APT61_RS16500 PF13823 Alcohol dehydrogenase GroES-associated APT61_RS16500 PF08240 Alcohol dehydrogenase GroES-like domain APT61_RS16505 PF00582 Universal stress protein family APT61_RS16510 PF13192 Thioredoxin domain APT61_RS16510 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT61_RS16515 PF10417 C-terminal domain of 1-Cys peroxiredoxin APT61_RS16515 PF00578 AhpC/TSA family APT61_RS16520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS16520 PF03466 LysR substrate binding domain APT61_RS16525 PF00155 Aminotransferase class I and II APT61_RS16530 PF00596 Class II Aldolase and Adducin N-terminal domain APT61_RS16540 PF03079 ARD/ARD' family APT61_RS16545 PF01008 Initiation factor 2 subunit family APT61_RS16550 PF01636 Phosphotransferase enzyme family APT61_RS16565 PF02653 Branched-chain amino acid transport system / permease component APT61_RS16570 PF00005 ABC transporter APT61_RS16575 PF00465 Iron-containing alcohol dehydrogenase APT61_RS16585 PF04328 Selenoprotein, putative APT61_RS16590 PF02554 Carbon starvation protein CstA APT61_RS16590 PF13722 5TM C-terminal transporter carbon starvation CstA APT61_RS16595 PF07670 Nucleoside recognition APT61_RS16600 PF07670 Nucleoside recognition APT61_RS16605 PF01546 Peptidase family M20/M25/M40 APT61_RS16605 PF07687 Peptidase dimerisation domain APT61_RS16610 PF03061 Thioesterase superfamily APT61_RS16620 PF00857 Isochorismatase family APT61_RS16620 PF00550 Phosphopantetheine attachment site APT61_RS16625 PF13193 AMP-binding enzyme C-terminal domain APT61_RS16625 PF00501 AMP-binding enzyme APT61_RS16630 PF00425 chorismate binding enzyme APT61_RS16635 PF01497 Periplasmic binding protein APT61_RS16640 PF05977 Transmembrane secretion effector APT61_RS16645 PF01032 FecCD transport family APT61_RS16650 PF01032 FecCD transport family APT61_RS16655 PF00005 ABC transporter APT61_RS16660 PF00550 Phosphopantetheine attachment site APT61_RS16660 PF00668 Condensation domain APT61_RS16660 PF00501 AMP-binding enzyme APT61_RS16660 PF00975 Thioesterase domain APT61_RS16660 PF13193 AMP-binding enzyme C-terminal domain APT61_RS16665 PF03621 MbtH-like protein APT61_RS16670 PF00756 Putative esterase APT61_RS16670 PF11806 Domain of unknown function (DUF3327) APT61_RS16675 PF07715 TonB-dependent Receptor Plug Domain APT61_RS16675 PF00593 TonB dependent receptor APT61_RS16680 PF01648 4'-phosphopantetheinyl transferase superfamily APT61_RS16680 PF17837 4'-phosphopantetheinyl transferase N-terminal domain APT61_RS16685 PF13407 Periplasmic binding protein domain APT61_RS16695 PF00005 ABC transporter APT61_RS16700 PF02653 Branched-chain amino acid transport system / permease component APT61_RS16705 PF04198 Putative sugar-binding domain APT61_RS16705 PF00325 Bacterial regulatory proteins, crp family APT61_RS16710 PF00456 Transketolase, thiamine diphosphate binding domain APT61_RS16715 PF02779 Transketolase, pyrimidine binding domain APT61_RS16715 PF02780 Transketolase, C-terminal domain APT61_RS16725 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APT61_RS16725 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APT61_RS16730 PF09618 CRISPR-associated protein (Cas_Csy4) APT61_RS16735 PF09615 CRISPR-associated protein (Cas_Csy3) APT61_RS16740 PF09614 CRISPR-associated protein (Cas_Csy2) APT61_RS16745 PF09611 CRISPR-associated protein (Cas_Csy1) APT61_RS16770 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS16775 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS16775 PF12911 N-terminal TM domain of oligopeptide transport permease C APT61_RS16780 PF00005 ABC transporter APT61_RS16780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APT61_RS16785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APT61_RS16785 PF00005 ABC transporter APT61_RS16790 PF00313 'Cold-shock' DNA-binding domain APT61_RS16795 PF10820 Protein of unknown function (DUF2543) APT61_RS16800 PF00583 Acetyltransferase (GNAT) family APT61_RS16805 PF04107 Glutamate-cysteine ligase family 2(GCS2) APT61_RS16810 PF00873 AcrB/AcrD/AcrF family APT61_RS16815 PF13533 Biotin-lipoyl like APT61_RS16820 PF00690 Cation transporter/ATPase, N-terminus APT61_RS16820 PF00689 Cation transporting ATPase, C-terminus APT61_RS16825 PF06643 Protein of unknown function (DUF1158) APT61_RS16835 PF07715 TonB-dependent Receptor Plug Domain APT61_RS16835 PF00593 TonB dependent receptor APT61_RS16840 PF12833 Helix-turn-helix domain APT61_RS16845 PF12706 Beta-lactamase superfamily domain APT61_RS16855 PF04237 YjbR APT61_RS16860 PF00881 Nitroreductase family APT61_RS16880 PF07690 Major Facilitator Superfamily APT61_RS16885 PF00924 Mechanosensitive ion channel APT61_RS16890 PF00356 Bacterial regulatory proteins, lacI family APT61_RS16905 PF03825 Nucleoside H+ symporter APT61_RS16915 PF13744 Helix-turn-helix domain APT61_RS16920 PF00324 Amino acid permease APT61_RS16930 PF00593 TonB dependent receptor APT61_RS16930 PF07715 TonB-dependent Receptor Plug Domain APT61_RS16950 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain APT61_RS16950 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain APT61_RS16960 PF02378 Phosphotransferase system, EIIC APT61_RS16960 PF00367 phosphotransferase system, EIIB APT61_RS16960 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 APT61_RS16965 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family APT61_RS16965 PF00356 Bacterial regulatory proteins, lacI family APT61_RS16970 PF04307 LexA-binding, inner membrane-associated putative hydrolase APT61_RS16975 PF09190 DALR domain APT61_RS16975 PF01406 tRNA synthetases class I (C) catalytic domain APT61_RS16980 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD APT61_RS16985 PF00149 Calcineurin-like phosphoesterase APT61_RS17000 PF00731 AIR carboxylase APT61_RS17005 PF02222 ATP-grasp domain APT61_RS17005 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain APT61_RS17015 PF00267 Gram-negative porin APT61_RS17025 PF00005 ABC transporter APT61_RS17030 PF13472 GDSL-like Lipase/Acylhydrolase family APT61_RS17035 PF00106 short chain dehydrogenase APT61_RS17040 PF00085 Thioredoxin APT61_RS17045 PF01145 SPFH domain / Band 7 family APT61_RS17045 PF16200 C-terminal region of band_7 APT61_RS17050 PF01957 NfeD-like C-terminal, partner-binding APT61_RS17065 PF13411 MerR HTH family regulatory protein APT61_RS17070 PF00403 Heavy-metal-associated domain APT61_RS17075 PF01963 TraB family APT61_RS17080 PF04073 Aminoacyl-tRNA editing domain APT61_RS17085 PF00149 Calcineurin-like phosphoesterase APT61_RS17085 PF02872 5'-nucleotidase, C-terminal domain APT61_RS17090 PF07690 Major Facilitator Superfamily APT61_RS17095 PF00999 Sodium/hydrogen exchanger family APT61_RS17095 PF02254 TrkA-N domain APT61_RS17100 PF00294 pfkB family carbohydrate kinase APT61_RS17105 PF00762 Ferrochelatase APT61_RS17110 PF05191 Adenylate kinase, active site lid APT61_RS17115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS17115 PF00183 Hsp90 protein APT61_RS17120 PF02132 RecR protein APT61_RS17120 PF13662 Toprim domain APT61_RS17125 PF02575 YbaB/EbfC DNA-binding family APT61_RS17130 PF12169 DNA polymerase III subunits gamma and tau domain III APT61_RS17130 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding APT61_RS17130 PF12170 DNA polymerase III tau subunit V interacting with alpha APT61_RS17135 PF00156 Phosphoribosyl transferase domain APT61_RS17140 PF04304 Protein of unknown function (DUF454) APT61_RS17145 PF07445 Primosomal replication protein priC APT61_RS17150 PF12794 Mechanosensitive ion channel inner membrane domain 1 APT61_RS17150 PF12795 Mechanosensitive ion channel porin domain APT61_RS17150 PF00924 Mechanosensitive ion channel APT61_RS17155 PF08361 MAATS-type transcriptional repressor, C-terminal region APT61_RS17155 PF00440 Bacterial regulatory proteins, tetR family APT61_RS17160 PF00529 HlyD membrane-fusion protein of T1SS APT61_RS17160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APT61_RS17165 PF00873 AcrB/AcrD/AcrF family APT61_RS17170 PF10757 Biofilm formation regulator YbaJ APT61_RS17175 PF05321 Haemolysin expression modulating protein APT61_RS17180 PF10777 Inner membrane protein YlaC APT61_RS17185 PF00563 EAL domain APT61_RS17185 PF12792 CSS motif domain associated with EAL APT61_RS17190 PF07237 Protein of unknown function (DUF1428) APT61_RS17195 PF02837 Glycosyl hydrolases family 2, sugar binding domain APT61_RS17195 PF02836 Glycosyl hydrolases family 2, TIM barrel domain APT61_RS17195 PF00703 Glycosyl hydrolases family 2 APT61_RS17195 PF02929 Beta galactosidase small chain APT61_RS17195 PF16353 Domain of unknown function(DUF4981) APT61_RS17200 PF00356 Bacterial regulatory proteins, lacI family APT61_RS17210 PF00392 Bacterial regulatory proteins, gntR family APT61_RS17210 PF00155 Aminotransferase class I and II APT61_RS17230 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain APT61_RS17235 PF09619 Type III secretion system lipoprotein chaperone (YscW) APT61_RS17245 PF00909 Ammonium Transporter Family APT61_RS17250 PF00543 Nitrogen regulatory protein P-II APT61_RS17255 PF00005 ABC transporter APT61_RS17255 PF00664 ABC transporter transmembrane region APT61_RS17260 PF00664 ABC transporter transmembrane region APT61_RS17260 PF00005 ABC transporter APT61_RS17265 PF13404 AsnC-type helix-turn-helix domain APT61_RS17265 PF01037 Lrp/AsnC ligand binding domain APT61_RS17270 PF00291 Pyridoxal-phosphate dependent enzyme APT61_RS17280 PF12793 Sugar transport-related sRNA regulator N-term APT61_RS17280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APT61_RS17285 PF06508 Queuosine biosynthesis protein QueC APT61_RS17300 PF13145 PPIC-type PPIASE domain APT61_RS17305 PF00216 Bacterial DNA-binding protein APT61_RS17310 PF02190 ATP-dependent protease La (LON) substrate-binding domain APT61_RS17310 PF05362 Lon protease (S16) C-terminal proteolytic domain APT61_RS17310 PF00004 ATPase family associated with various cellular activities (AAA) APT61_RS17315 PF10431 C-terminal, D2-small domain, of ClpB protein APT61_RS17315 PF07724 AAA domain (Cdc48 subfamily) APT61_RS17315 PF06689 ClpX C4-type zinc finger APT61_RS17320 PF00574 Clp protease APT61_RS17325 PF05697 Bacterial trigger factor protein (TF) APT61_RS17325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APT61_RS17325 PF05698 Bacterial trigger factor protein (TF) C-terminus APT61_RS17330 PF01722 BolA-like protein APT61_RS17335 PF03923 Uncharacterized lipoprotein APT61_RS17335 PF08139 Prokaryotic membrane lipoprotein lipid attachment site APT61_RS17340 PF07690 Major Facilitator Superfamily APT61_RS17345 PF00116 Cytochrome C oxidase subunit II, periplasmic domain APT61_RS17345 PF06481 COX Aromatic Rich Motif APT61_RS17350 PF00115 Cytochrome C and Quinol oxidase polypeptide I APT61_RS17355 PF00510 Cytochrome c oxidase subunit III APT61_RS17360 PF03626 Prokaryotic Cytochrome C oxidase subunit IV APT61_RS17365 PF01040 UbiA prenyltransferase family APT61_RS17370 PF07690 Major Facilitator Superfamily APT61_RS17375 PF04461 Protein of unknown function (DUF520) APT61_RS17380 PF08546 Ketopantoate reductase PanE/ApbA C terminal APT61_RS17380 PF02558 Ketopantoate reductase PanE/ApbA APT61_RS17385 PF01965 DJ-1/PfpI family APT61_RS17390 PF02568 Thiamine biosynthesis protein (ThiI) APT61_RS17390 PF02926 THUMP domain APT61_RS17395 PF02609 Exonuclease VII small subunit APT61_RS17400 PF00348 Polyprenyl synthetase APT61_RS17405 PF13292 1-deoxy-D-xylulose-5-phosphate synthase APT61_RS17405 PF02780 Transketolase, C-terminal domain APT61_RS17405 PF02779 Transketolase, pyrimidine binding domain APT61_RS17410 PF00248 Aldo/keto reductase family APT61_RS17415 PF02769 AIR synthase related protein, C-terminal domain APT61_RS17415 PF00586 AIR synthase related protein, N-terminal domain APT61_RS17420 PF01029 NusB family APT61_RS17425 PF00885 6,7-dimethyl-8-ribityllumazine synthase APT61_RS17430 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region APT61_RS17430 PF01872 RibD C-terminal domain APT61_RS17435 PF03477 ATP cone domain APT61_RS17440 PF11622 Protein of unknown function (DUF3251) APT61_RS17445 PF03502 Nucleoside-specific channel-forming protein, Tsx APT61_RS17460 PF02355 Protein export membrane protein APT61_RS17460 PF07549 SecD/SecF GG Motif APT61_RS17465 PF13721 SecD export protein N-terminal TM region APT61_RS17465 PF02355 Protein export membrane protein APT61_RS17465 PF07549 SecD/SecF GG Motif APT61_RS17470 PF02699 Preprotein translocase subunit APT61_RS17475 PF01702 Queuine tRNA-ribosyltransferase APT61_RS17480 PF02547 Queuosine biosynthesis protein APT61_RS17485 PF04336 Acyl carrier protein phosphodiesterase APT61_RS17490 PF00578 AhpC/TSA family APT61_RS17490 PF10417 C-terminal domain of 1-Cys peroxiredoxin APT61_RS17495 PF00128 Alpha amylase, catalytic domain APT61_RS17495 PF02903 Alpha amylase, N-terminal ig-like domain APT61_RS17500 PF00324 Amino acid permease APT61_RS17505 PF05525 Branched-chain amino acid transport protein APT61_RS17510 PF00512 His Kinase A (phospho-acceptor) domain APT61_RS17510 PF00989 PAS fold APT61_RS17510 PF11808 Phosphate regulon sensor protein PhoR APT61_RS17510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS17515 PF00072 Response regulator receiver domain APT61_RS17515 PF00486 Transcriptional regulatory protein, C terminal APT61_RS17520 PF00149 Calcineurin-like phosphoesterase APT61_RS17520 PF12320 Type 5 capsule protein repressor C-terminal domain APT61_RS17525 PF13476 AAA domain APT61_RS17530 PF00480 ROK family APT61_RS17535 PF04381 Putative exonuclease, RdgC APT61_RS17540 PF06865 Pyrimidine/purine nucleoside phosphorylase APT61_RS17545 PF07302 AroM protein APT61_RS17550 PF16362 YaiA protein APT61_RS17555 PF01202 Shikimate kinase APT61_RS17560 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 APT61_RS17565 PF03807 NADP oxidoreductase coenzyme F420-dependent APT61_RS17565 PF14748 Pyrroline-5-carboxylate reductase dimerisation APT61_RS17570 PF05230 MASE2 domain APT61_RS17570 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS17575 PF07769 psiF repeat APT61_RS17580 PF00245 Alkaline phosphatase APT61_RS17585 PF10796 Sigma-S stabilisation anti-adaptor protein APT61_RS17590 PF07690 Major Facilitator Superfamily APT61_RS17600 PF07478 D-ala D-ala ligase C-terminus APT61_RS17600 PF01820 D-ala D-ala ligase N-terminus APT61_RS17605 PF10953 Protein of unknown function (DUF2754) APT61_RS17610 PF10954 Protein of unknown function (DUF2755) APT61_RS17615 PF07759 Protein of unknown function (DUF1615) APT61_RS17620 PF05992 SbmA/BacA-like family APT61_RS17625 PF00144 Beta-lactamase APT61_RS17630 PF15977 Winged helix-turn-helix DNA binding APT61_RS17635 PF03797 Autotransporter beta-domain APT61_RS17640 PF00490 Delta-aminolevulinic acid dehydratase APT61_RS17650 PF02668 Taurine catabolism dioxygenase TauD, TfdA family APT61_RS17655 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS17660 PF00005 ABC transporter APT61_RS17665 PF04069 Substrate binding domain of ABC-type glycine betaine transport system APT61_RS17670 PF00196 Bacterial regulatory proteins, luxR family APT61_RS17670 PF00072 Response regulator receiver domain APT61_RS17675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS17675 PF07730 Histidine kinase APT61_RS17675 PF05231 MASE1 APT61_RS17680 PF07690 Major Facilitator Superfamily APT61_RS17690 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS17695 PF00005 ABC transporter APT61_RS17695 PF08402 TOBE domain APT61_RS17700 PF13302 Acetyltransferase (GNAT) domain APT61_RS17705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS17705 PF03466 LysR substrate binding domain APT61_RS17710 PF07690 Major Facilitator Superfamily APT61_RS17720 PF11471 Maltoporin periplasmic N-terminal extension APT61_RS17720 PF02264 LamB porin APT61_RS17735 PF12833 Helix-turn-helix domain APT61_RS17735 PF02311 AraC-like ligand binding domain APT61_RS17740 PF00248 Aldo/keto reductase family APT61_RS17745 PF02129 X-Pro dipeptidyl-peptidase (S15 family) APT61_RS17750 PF08240 Alcohol dehydrogenase GroES-like domain APT61_RS17750 PF00107 Zinc-binding dehydrogenase APT61_RS17755 PF07690 Major Facilitator Superfamily APT61_RS17765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS17765 PF03466 LysR substrate binding domain APT61_RS17770 PF02574 Homocysteine S-methyltransferase APT61_RS17775 PF00324 Amino acid permease APT61_RS17780 PF01594 AI-2E family transporter APT61_RS17785 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS17805 PF00171 Aldehyde dehydrogenase family APT61_RS17810 PF00701 Dihydrodipicolinate synthetase family APT61_RS17815 PF00892 EamA-like transporter family APT61_RS17820 PF00083 Sugar (and other) transporter APT61_RS17825 PF01965 DJ-1/PfpI family APT61_RS17830 PF01047 MarR family APT61_RS17835 PF02441 Flavoprotein APT61_RS17840 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase APT61_RS17845 PF10518 TAT (twin-arginine translocation) pathway signal sequence APT61_RS17845 PF00111 2Fe-2S iron-sulfur cluster binding domain APT61_RS17845 PF01799 [2Fe-2S] binding domain APT61_RS17850 PF03450 CO dehydrogenase flavoprotein C-terminal domain APT61_RS17850 PF00941 FAD binding domain in molybdopterin dehydrogenase APT61_RS17855 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APT61_RS17855 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APT61_RS17860 PF13478 XdhC Rossmann domain APT61_RS17860 PF02625 XdhC and CoxI family APT61_RS17865 PF03466 LysR substrate binding domain APT61_RS17875 PF00561 alpha/beta hydrolase fold APT61_RS17895 PF07859 alpha/beta hydrolase fold APT61_RS17900 PF00302 Chloramphenicol acetyltransferase APT61_RS17910 PF00563 EAL domain APT61_RS17910 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS17910 PF08447 PAS fold APT61_RS17910 PF08448 PAS fold APT61_RS17915 PF00171 Aldehyde dehydrogenase family APT61_RS17920 PF00696 Amino acid kinase family APT61_RS17920 PF01472 PUA domain APT61_RS17925 PF00267 Gram-negative porin APT61_RS17930 PF07417 Sigma factor-binding transcriptional regulator Crl APT61_RS17935 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) APT61_RS17940 PF00156 Phosphoribosyl transferase domain APT61_RS17945 PF07687 Peptidase dimerisation domain APT61_RS17945 PF01546 Peptidase family M20/M25/M40 APT61_RS17950 PF00817 impB/mucB/samB family APT61_RS17950 PF11799 impB/mucB/samB family C-terminal domain APT61_RS17950 PF11798 IMS family HHH motif APT61_RS17955 PF03009 Glycerophosphoryl diester phosphodiesterase family APT61_RS17960 PF04400 (Na+)-NQR maturation NqrM APT61_RS17965 PF00175 Oxidoreductase NAD-binding domain APT61_RS17965 PF00111 2Fe-2S iron-sulfur cluster binding domain APT61_RS17965 PF00970 Oxidoreductase FAD-binding domain APT61_RS17970 PF02508 Rnf-Nqr subunit, membrane protein APT61_RS17975 PF02508 Rnf-Nqr subunit, membrane protein APT61_RS17980 PF04205 FMN-binding domain APT61_RS17985 PF03116 NQR2, RnfD, RnfE family APT61_RS17990 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) APT61_RS17990 PF11973 NQRA C-terminal domain APT61_RS17995 PF03734 L,D-transpeptidase catalytic domain APT61_RS18000 PF13230 Glutamine amidotransferases class-II APT61_RS18005 PF13580 SIS domain APT61_RS18010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APT61_RS18010 PF09317 Domain of unknown function (DUF1974) APT61_RS18010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APT61_RS18010 PF02770 Acyl-CoA dehydrogenase, middle domain APT61_RS18015 PF00795 Carbon-nitrogen hydrolase APT61_RS18025 PF00929 Exonuclease APT61_RS18030 PF00075 RNase H APT61_RS18035 PF08241 Methyltransferase domain APT61_RS18040 PF00753 Metallo-beta-lactamase superfamily APT61_RS18040 PF16123 Hydroxyacylglutathione hydrolase C-terminus APT61_RS18045 PF01464 Transglycosylase SLT domain APT61_RS18045 PF01476 LysM domain APT61_RS18050 PF08241 Methyltransferase domain APT61_RS18055 PF03372 Endonuclease/Exonuclease/phosphatase family APT61_RS18060 PF07690 Major Facilitator Superfamily APT61_RS18065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS18065 PF03466 LysR substrate binding domain APT61_RS18070 PF00248 Aldo/keto reductase family APT61_RS18110 PF09383 NIL domain APT61_RS18110 PF00005 ABC transporter APT61_RS18115 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS18120 PF03180 NLPA lipoprotein APT61_RS18125 PF16358 RcsF lipoprotein APT61_RS18130 PF18389 TrmO C-terminal domain APT61_RS18130 PF01980 tRNA-methyltransferase O APT61_RS18135 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APT61_RS18135 PF04073 Aminoacyl-tRNA editing domain APT61_RS18135 PF03129 Anticodon binding domain APT61_RS18140 PF04170 NlpE N-terminal domain APT61_RS18140 PF17185 NlpE C-terminal OB domain APT61_RS18145 PF00472 RF-1 domain APT61_RS18150 PF07152 YaeQ protein APT61_RS18155 PF06786 Uncharacterised protein family (UPF0253) APT61_RS18160 PF07073 Modulator of Rho-dependent transcription termination (ROF) APT61_RS18165 PF01171 PP-loop family APT61_RS18165 PF11734 TilS substrate C-terminal domain APT61_RS18165 PF09179 TilS substrate binding domain APT61_RS18170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APT61_RS18175 PF01276 Orn/Lys/Arg decarboxylase, major domain APT61_RS18175 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain APT61_RS18175 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain APT61_RS18180 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit APT61_RS18185 PF02811 PHP domain APT61_RS18185 PF01336 OB-fold nucleic acid binding domain APT61_RS18185 PF14579 Helix-hairpin-helix motif APT61_RS18185 PF17657 Bacterial DNA polymerase III alpha subunit finger domain APT61_RS18185 PF07733 Bacterial DNA polymerase III alpha NTPase domain APT61_RS18190 PF01351 Ribonuclease HII APT61_RS18195 PF02684 Lipid-A-disaccharide synthetase APT61_RS18200 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 APT61_RS18200 PF00132 Bacterial transferase hexapeptide (six repeats) APT61_RS18205 PF07977 FabA-like domain APT61_RS18210 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD APT61_RS18210 PF00132 Bacterial transferase hexapeptide (six repeats) APT61_RS18215 PF03938 Outer membrane protein (OmpH-like) APT61_RS18220 PF07244 Surface antigen variable number repeat APT61_RS18220 PF01103 Surface antigen APT61_RS18225 PF02163 Peptidase family M50 APT61_RS18225 PF17820 PDZ domain APT61_RS18235 PF01255 Putative undecaprenyl diphosphate synthase APT61_RS18240 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain APT61_RS18240 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase APT61_RS18240 PF13288 DXP reductoisomerase C-terminal domain APT61_RS18245 PF01765 Ribosome recycling factor APT61_RS18250 PF00696 Amino acid kinase family APT61_RS18255 PF00889 Elongation factor TS APT61_RS18260 PF00318 Ribosomal protein S2 APT61_RS18265 PF00557 Metallopeptidase family M24 APT61_RS18270 PF01909 Nucleotidyltransferase domain APT61_RS18270 PF01842 ACT domain APT61_RS18270 PF01966 HD domain APT61_RS18270 PF08335 GlnD PII-uridylyltransferase APT61_RS18275 PF14602 Hexapeptide repeat of succinyl-transferase APT61_RS18275 PF00132 Bacterial transferase hexapeptide (six repeats) APT61_RS18275 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal APT61_RS18280 PF11944 Protein of unknown function (DUF3461) APT61_RS18285 PF05651 Putative sugar diacid recognition APT61_RS18285 PF13556 PucR C-terminal helix-turn-helix domain APT61_RS18285 PF17853 GGDEF-like domain APT61_RS18290 PF00595 PDZ domain APT61_RS18295 PF01966 HD domain APT61_RS18295 PF13286 Phosphohydrolase-associated domain APT61_RS18300 PF01048 Phosphorylase superfamily APT61_RS18305 PF01497 Periplasmic binding protein APT61_RS18310 PF03458 UPF0126 domain APT61_RS18315 PF01521 Iron-sulphur cluster biosynthesis APT61_RS18320 PF00654 Voltage gated chloride channel APT61_RS18325 PF00202 Aminotransferase class-III APT61_RS18330 PF01032 FecCD transport family APT61_RS18335 PF01497 Periplasmic binding protein APT61_RS18340 PF00005 ABC transporter APT61_RS18345 PF07715 TonB-dependent Receptor Plug Domain APT61_RS18345 PF00593 TonB dependent receptor APT61_RS18350 PF14814 Bifunctional transglycosylase second domain APT61_RS18350 PF00905 Penicillin binding protein transpeptidase domain APT61_RS18350 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal APT61_RS18350 PF00912 Transglycosylase APT61_RS18355 PF08482 ATP-dependent helicase C-terminal APT61_RS18355 PF00271 Helicase conserved C-terminal domain APT61_RS18355 PF04408 Helicase associated domain (HA2) APT61_RS18355 PF00270 DEAD/DEAH box helicase APT61_RS18360 PF02834 LigT like Phosphoesterase APT61_RS18365 PF17746 SfsA N-terminal OB domain APT61_RS18365 PF03749 Sugar fermentation stimulation protein RE domain APT61_RS18370 PF01258 Prokaryotic dksA/traR C4-type zinc finger APT61_RS18375 PF00749 tRNA synthetases class I (E and Q), catalytic domain APT61_RS18380 PF12627 Probable RNA and SrmB- binding site of polymerase A APT61_RS18380 PF12626 Polymerase A arginine-rich C-terminus APT61_RS18380 PF01743 Poly A polymerase head domain APT61_RS18385 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) APT61_RS18390 PF02548 Ketopantoate hydroxymethyltransferase APT61_RS18395 PF02569 Pantoate-beta-alanine ligase APT61_RS18400 PF02261 Aspartate decarboxylase APT61_RS18405 PF01522 Polysaccharide deacetylase APT61_RS18410 PF03610 PTS system fructose IIA component APT61_RS18415 PF01061 ABC-2 type transporter APT61_RS18420 PF00005 ABC transporter APT61_RS18425 PF00484 Carbonic anhydrase APT61_RS18430 PF00156 Phosphoribosyl transferase domain APT61_RS18435 PF01011 PQQ enzyme repeat APT61_RS18440 PF00394 Multicopper oxidase APT61_RS18440 PF07731 Multicopper oxidase APT61_RS18440 PF07732 Multicopper oxidase APT61_RS18445 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) APT61_RS18450 PF17284 Spermidine synthase tetramerisation domain APT61_RS18455 PF02675 S-adenosylmethionine decarboxylase APT61_RS18460 PF06062 Uncharacterised protein family (UPF0231) APT61_RS18465 PF00330 Aconitase family (aconitate hydratase) APT61_RS18465 PF06434 Aconitate hydratase 2 N-terminus APT61_RS18465 PF11791 Aconitate B N-terminal domain APT61_RS18470 PF11737 Protein of unknown function (DUF3300) APT61_RS18480 PF07992 Pyridine nucleotide-disulphide oxidoreductase APT61_RS18480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APT61_RS18485 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APT61_RS18485 PF00364 Biotin-requiring enzyme APT61_RS18485 PF02817 e3 binding domain APT61_RS18490 PF17831 Pyruvate dehydrogenase E1 component middle domain APT61_RS18490 PF00456 Transketolase, thiamine diphosphate binding domain APT61_RS18495 PF07729 FCD domain APT61_RS18495 PF00392 Bacterial regulatory proteins, gntR family APT61_RS18500 PF00324 Amino acid permease APT61_RS18510 PF04616 Glycosyl hydrolases family 43 APT61_RS18510 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain APT61_RS18515 PF17113 Regulatory signalling modulator protein AmpE APT61_RS18520 PF01510 N-acetylmuramoyl-L-alanine amidase APT61_RS18525 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain APT61_RS18525 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain APT61_RS18530 PF07963 Prokaryotic N-terminal methylation motif APT61_RS18535 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain APT61_RS18535 PF00437 Type II/IV secretion system protein APT61_RS18540 PF00482 Type II secretion system (T2SS), protein F APT61_RS18545 PF00478 IMP dehydrogenase / GMP reductase domain APT61_RS18550 PF01121 Dephospho-CoA kinase APT61_RS18555 PF07072 Cell division protein APT61_RS18560 PF03884 DNA gyrase inhibitor YacG APT61_RS18565 PF00293 NUDIX domain APT61_RS18570 PF01043 SecA preprotein cross-linking domain APT61_RS18570 PF07517 SecA DEAD-like domain APT61_RS18570 PF02810 SEC-C motif APT61_RS18570 PF07516 SecA Wing and Scaffold domain APT61_RS18575 PF06558 Secretion monitor precursor protein (SecM) APT61_RS18580 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase APT61_RS18585 PF12327 FtsZ family, C-terminal domain APT61_RS18585 PF00091 Tubulin/FtsZ family, GTPase domain APT61_RS18590 PF02491 SHS2 domain inserted in FTSA APT61_RS18595 PF08478 POTRA domain, FtsQ-type APT61_RS18595 PF03799 Cell division protein FtsQ APT61_RS18600 PF01820 D-ala D-ala ligase N-terminus APT61_RS18600 PF07478 D-ala D-ala ligase C-terminus APT61_RS18605 PF01225 Mur ligase family, catalytic domain APT61_RS18605 PF02875 Mur ligase family, glutamate ligase domain APT61_RS18605 PF08245 Mur ligase middle domain APT61_RS18610 PF03033 Glycosyltransferase family 28 N-terminal domain APT61_RS18610 PF04101 Glycosyltransferase family 28 C-terminal domain APT61_RS18615 PF01098 Cell cycle protein APT61_RS18620 PF08245 Mur ligase middle domain APT61_RS18620 PF02875 Mur ligase family, glutamate ligase domain APT61_RS18625 PF00953 Glycosyl transferase family 4 APT61_RS18625 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 APT61_RS18630 PF01225 Mur ligase family, catalytic domain APT61_RS18630 PF02875 Mur ligase family, glutamate ligase domain APT61_RS18630 PF08245 Mur ligase middle domain APT61_RS18635 PF01225 Mur ligase family, catalytic domain APT61_RS18635 PF02875 Mur ligase family, glutamate ligase domain APT61_RS18635 PF08245 Mur ligase middle domain APT61_RS18640 PF00905 Penicillin binding protein transpeptidase domain APT61_RS18640 PF03717 Penicillin-binding Protein dimerisation domain APT61_RS18645 PF04999 Cell division protein FtsL APT61_RS18650 PF01795 MraW methylase family APT61_RS18655 PF02381 MraZ protein, putative antitoxin-like APT61_RS18660 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family APT61_RS18660 PF00356 Bacterial regulatory proteins, lacI family APT61_RS18665 PF10369 Small subunit of acetolactate synthase APT61_RS18670 PF00205 Thiamine pyrophosphate enzyme, central domain APT61_RS18670 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APT61_RS18670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APT61_RS18675 PF03466 LysR substrate binding domain APT61_RS18675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS18680 PF00682 HMGL-like APT61_RS18680 PF08502 LeuA allosteric (dimerisation) domain APT61_RS18685 PF00180 Isocitrate/isopropylmalate dehydrogenase APT61_RS18690 PF00330 Aconitase family (aconitate hydratase) APT61_RS18695 PF00694 Aconitase C-terminal domain APT61_RS18700 PF01848 Hok/gef family APT61_RS18705 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin APT61_RS18710 PF01850 PIN domain APT61_RS18715 PF12852 Cupin APT61_RS18715 PF12833 Helix-turn-helix domain APT61_RS18720 PF01370 NAD dependent epimerase/dehydratase family APT61_RS18735 PF03466 LysR substrate binding domain APT61_RS18735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS18740 PF00248 Aldo/keto reductase family APT61_RS18745 PF07690 Major Facilitator Superfamily APT61_RS18755 PF07366 SnoaL-like polyketide cyclase APT61_RS18765 PF00440 Bacterial regulatory proteins, tetR family APT61_RS18770 PF00171 Aldehyde dehydrogenase family APT61_RS18775 PF01047 MarR family APT61_RS18780 PF07859 alpha/beta hydrolase fold APT61_RS18785 PF14863 Alkyl sulfatase dimerisation APT61_RS18785 PF14864 Alkyl sulfatase C-terminal APT61_RS18785 PF00753 Metallo-beta-lactamase superfamily APT61_RS18790 PF13333 Integrase core domain APT61_RS18790 PF13276 HTH-like domain APT61_RS18790 PF00665 Integrase core domain APT61_RS18800 PF07690 Major Facilitator Superfamily APT61_RS18805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APT61_RS18805 PF12793 Sugar transport-related sRNA regulator N-term APT61_RS18815 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS18820 PF00005 ABC transporter APT61_RS18825 PF09335 SNARE associated Golgi protein APT61_RS18830 PF12833 Helix-turn-helix domain APT61_RS18830 PF02311 AraC-like ligand binding domain APT61_RS18835 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APT61_RS18840 PF11762 L-arabinose isomerase C-terminal domain APT61_RS18840 PF02610 L-arabinose isomerase APT61_RS18845 PF00596 Class II Aldolase and Adducin N-terminal domain APT61_RS18850 PF00136 DNA polymerase family B APT61_RS18850 PF03104 DNA polymerase family B, exonuclease domain APT61_RS18855 PF00271 Helicase conserved C-terminal domain APT61_RS18855 PF18337 RapA N-terminal Tudor like domain APT61_RS18855 PF12137 RNA polymerase recycling family C-terminal APT61_RS18855 PF00176 SNF2 family N-terminal domain APT61_RS18855 PF18339 RapA N-terminal Tudor like domain 1 APT61_RS18860 PF00849 RNA pseudouridylate synthase APT61_RS18865 PF00226 DnaJ domain APT61_RS18865 PF05099 Tellurite resistance protein TerB APT61_RS18870 PF03968 OstA-like protein APT61_RS18870 PF04453 LPS transport system D APT61_RS18875 PF09312 SurA N-terminal domain APT61_RS18875 PF00639 PPIC-type PPIASE domain APT61_RS18880 PF04166 Pyridoxal phosphate biosynthetic protein PdxA APT61_RS18885 PF00398 Ribosomal RNA adenine dimethylase APT61_RS18890 PF04379 ApaG domain APT61_RS18895 PF00149 Calcineurin-like phosphoesterase APT61_RS18900 PF00186 Dihydrofolate reductase APT61_RS18905 PF02254 TrkA-N domain APT61_RS18905 PF00999 Sodium/hydrogen exchanger family APT61_RS18910 PF02525 Flavodoxin-like fold APT61_RS18915 PF03797 Autotransporter beta-domain APT61_RS18920 PF06004 Bacterial protein of unknown function (DUF903) APT61_RS18930 PF02142 MGS-like domain APT61_RS18930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APT61_RS18930 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APT61_RS18935 PF00117 Glutamine amidotransferase class-I APT61_RS18935 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain APT61_RS18940 PF05173 Dihydrodipicolinate reductase, C-terminus APT61_RS18940 PF01113 Dihydrodipicolinate reductase, N-terminus APT61_RS18945 PF01411 tRNA synthetases class II (A) APT61_RS18945 PF02272 DHHA1 domain APT61_RS18945 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APT61_RS18950 PF03466 LysR substrate binding domain APT61_RS18950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS18955 PF02401 LytB protein APT61_RS18960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APT61_RS18965 PF01252 Signal peptidase (SPase) II APT61_RS18970 PF08264 Anticodon-binding domain of tRNA APT61_RS18970 PF00133 tRNA synthetases class I (I, L, M and V) APT61_RS18970 PF06827 Zinc finger found in FPG and IleRS APT61_RS18975 PF01687 Riboflavin kinase APT61_RS18975 PF06574 FAD synthetase APT61_RS18980 PF01649 Ribosomal protein S20 APT61_RS18985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS18985 PF03466 LysR substrate binding domain APT61_RS18990 PF06965 Na+/H+ antiporter 1 APT61_RS18995 PF00684 DnaJ central domain APT61_RS18995 PF00226 DnaJ domain APT61_RS18995 PF01556 DnaJ C terminal domain APT61_RS19000 PF00012 Hsp70 protein APT61_RS19005 PF01184 GPR1/FUN34/yaaH family APT61_RS19010 PF01032 FecCD transport family APT61_RS19015 PF00005 ABC transporter APT61_RS19025 PF07690 Major Facilitator Superfamily APT61_RS19030 PF00994 Probable molybdopterin binding domain APT61_RS19035 PF00923 Transaldolase/Fructose-6-phosphate aldolase APT61_RS19040 PF01235 Sodium:alanine symporter family APT61_RS19045 PF03883 Peroxide stress protein YaaA APT61_RS19050 PF10697 Protein of unknown function (DUF2502) APT61_RS19055 PF14821 Threonine synthase N terminus APT61_RS19055 PF00291 Pyridoxal-phosphate dependent enzyme APT61_RS19060 PF08544 GHMP kinases C terminal APT61_RS19060 PF00288 GHMP kinases N terminal domain APT61_RS19065 PF13840 ACT domain APT61_RS19065 PF00742 Homoserine dehydrogenase APT61_RS19065 PF03447 Homoserine dehydrogenase, NAD binding domain APT61_RS19065 PF00696 Amino acid kinase family APT61_RS19065 PF01842 ACT domain APT61_RS19070 PF00588 SpoU rRNA Methylase family APT61_RS19075 PF00486 Transcriptional regulatory protein, C terminal APT61_RS19075 PF00072 Response regulator receiver domain APT61_RS19080 PF05981 CreA protein APT61_RS19085 PF06445 GyrI-like small molecule binding domain APT61_RS19085 PF12833 Helix-turn-helix domain APT61_RS19090 PF00300 Histidine phosphatase superfamily (branch 1) APT61_RS19095 PF01931 Protein of unknown function DUF84 APT61_RS19100 PF01371 Trp repressor protein APT61_RS19105 PF14718 Soluble lytic murein transglycosylase L domain APT61_RS19105 PF01464 Transglycosylase SLT domain APT61_RS19110 PF00005 ABC transporter APT61_RS19110 PF12848 ABC transporter APT61_RS19115 PF01381 Helix-turn-helix APT61_RS19115 PF13521 AAA domain APT61_RS19120 PF18073 Rubredoxin metal binding domain APT61_RS19125 PF18429 Domain of unknown function (DUF5609) APT61_RS19130 PF10144 Bacterial virulence factor haemolysin APT61_RS19135 PF10437 Bacterial lipoate protein ligase C-terminus APT61_RS19135 PF03099 Biotin/lipoate A/B protein ligase family APT61_RS19140 PF01048 Phosphorylase superfamily APT61_RS19145 PF01676 Metalloenzyme superfamily APT61_RS19150 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain APT61_RS19150 PF00591 Glycosyl transferase family, a/b domain APT61_RS19150 PF02885 Glycosyl transferase family, helical bundle domain APT61_RS19155 PF01791 DeoC/LacD family aldolase APT61_RS19160 PF11230 Protein of unknown function (DUF3029) APT61_RS19165 PF04055 Radical SAM superfamily APT61_RS19170 PF01026 TatD related DNase APT61_RS19175 PF01734 Patatin-like phospholipase APT61_RS19180 PF04972 BON domain APT61_RS19185 PF00009 Elongation factor Tu GTP binding domain APT61_RS19185 PF03144 Elongation factor Tu domain 2 APT61_RS19185 PF16658 Class II release factor RF3, C-terminal domain APT61_RS19190 PF13419 Haloacid dehalogenase-like hydrolase APT61_RS19195 PF00583 Acetyltransferase (GNAT) family APT61_RS19200 PF03603 DNA polymerase III psi subunit APT61_RS19205 PF08468 Methyltransferase small domain N-terminal APT61_RS19205 PF05175 Methyltransferase small domain APT61_RS19225 PF07256 Protein of unknown function (DUF1435) APT61_RS19230 PF11575 FhuF 2Fe-2S C-terminal domain APT61_RS19230 PF06276 Ferric iron reductase FhuF-like transporter APT61_RS19235 PF02378 Phosphotransferase system, EIIC APT61_RS19240 PF04073 Aminoacyl-tRNA editing domain APT61_RS19245 PF00196 Bacterial regulatory proteins, luxR family APT61_RS19250 PF00196 Bacterial regulatory proteins, luxR family APT61_RS19255 PF06738 Putative threonine/serine exporter APT61_RS19260 PF12821 Threonine/Serine exporter, ThrE APT61_RS19265 PF00440 Bacterial regulatory proteins, tetR family APT61_RS19265 PF17926 Tetracyclin repressor-like, C-terminal domain APT61_RS19270 PF02566 OsmC-like protein APT61_RS19275 PF17948 DnaT DNA-binding domain APT61_RS19280 PF01695 IstB-like ATP binding protein APT61_RS19285 PF10696 Protein of unknown function (DUF2501) APT61_RS19290 PF00884 Sulfatase APT61_RS19295 PF02203 Tar ligand binding domain homologue APT61_RS19295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APT61_RS19295 PF00672 HAMP domain APT61_RS19300 PF01047 MarR family APT61_RS19305 PF01557 Fumarylacetoacetate (FAA) hydrolase family APT61_RS19310 PF00171 Aldehyde dehydrogenase family APT61_RS19315 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase APT61_RS19320 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase APT61_RS19325 PF01557 Fumarylacetoacetate (FAA) hydrolase family APT61_RS19330 PF03328 HpcH/HpaI aldolase/citrate lyase family APT61_RS19335 PF07690 Major Facilitator Superfamily APT61_RS19365 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal APT61_RS19365 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal APT61_RS19370 PF01613 Flavin reductase like domain APT61_RS19380 PF10531 SLBB domain APT61_RS19380 PF02563 Polysaccharide biosynthesis/export protein APT61_RS19385 PF01061 ABC-2 type transporter APT61_RS19390 PF00005 ABC transporter APT61_RS19400 PF00535 Glycosyl transferase family 2 APT61_RS19405 PF14307 Glycosyltransferase WbsX APT61_RS19405 PF05045 Rhamnan synthesis protein F APT61_RS19415 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain APT61_RS19415 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain APT61_RS19415 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain APT61_RS19430 PF00535 Glycosyl transferase family 2 APT61_RS19440 PF16363 GDP-mannose 4,6 dehydratase APT61_RS19445 PF04321 RmlD substrate binding domain APT61_RS19450 PF00483 Nucleotidyl transferase APT61_RS19455 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase APT61_RS19460 PF05159 Capsule polysaccharide biosynthesis protein APT61_RS19465 PF05159 Capsule polysaccharide biosynthesis protein APT61_RS19490 PF13722 5TM C-terminal transporter carbon starvation CstA APT61_RS19490 PF02554 Carbon starvation protein CstA APT61_RS19495 PF04328 Selenoprotein, putative APT61_RS19500 PF02492 CobW/HypB/UreG, nucleotide-binding domain APT61_RS19500 PF07683 Cobalamin synthesis protein cobW C-terminal domain APT61_RS19510 PF01804 Penicillin amidase APT61_RS19515 PF00171 Aldehyde dehydrogenase family APT61_RS19540 PF04286 Protein of unknown function (DUF445) APT61_RS19550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APT61_RS19550 PF00529 HlyD membrane-fusion protein of T1SS APT61_RS19590 PF00171 Aldehyde dehydrogenase family APT61_RS19595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS19595 PF03466 LysR substrate binding domain APT61_RS19600 PF02627 Carboxymuconolactone decarboxylase family APT61_RS19605 PF00155 Aminotransferase class I and II APT61_RS19605 PF00392 Bacterial regulatory proteins, gntR family APT61_RS19615 PF00155 Aminotransferase class I and II APT61_RS19615 PF00392 Bacterial regulatory proteins, gntR family APT61_RS19620 PF07715 TonB-dependent Receptor Plug Domain APT61_RS19620 PF00593 TonB dependent receptor APT61_RS19640 PF08007 Cupin superfamily protein APT61_RS19650 PF08220 DeoR-like helix-turn-helix domain APT61_RS19650 PF00455 DeoR C terminal sensor domain APT61_RS19655 PF07690 Major Facilitator Superfamily APT61_RS19660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APT61_RS19665 PF00072 Response regulator receiver domain APT61_RS19665 PF00196 Bacterial regulatory proteins, luxR family APT61_RS19670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS19670 PF13493 Domain of unknown function (DUF4118) APT61_RS19670 PF00989 PAS fold APT61_RS19670 PF08447 PAS fold APT61_RS19670 PF13426 PAS domain APT61_RS19670 PF00512 His Kinase A (phospho-acceptor) domain APT61_RS19675 PF02954 Bacterial regulatory protein, Fis family APT61_RS19675 PF00072 Response regulator receiver domain APT61_RS19675 PF00158 Sigma-54 interaction domain APT61_RS19690 PF00857 Isochorismatase family APT61_RS19695 PF07969 Amidohydrolase family APT61_RS19700 PF07681 DoxX APT61_RS19710 PF00561 alpha/beta hydrolase fold APT61_RS19715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily APT61_RS19735 PF07728 AAA domain (dynein-related subfamily) APT61_RS19735 PF12102 Domain of unknown function (DUF3578) APT61_RS19745 PF00171 Aldehyde dehydrogenase family APT61_RS19750 PF13520 Amino acid permease APT61_RS19755 PF08943 CsiD APT61_RS19760 PF01266 FAD dependent oxidoreductase APT61_RS19765 PF00171 Aldehyde dehydrogenase family APT61_RS19770 PF00202 Aminotransferase class-III APT61_RS19775 PF00392 Bacterial regulatory proteins, gntR family APT61_RS19775 PF07729 FCD domain APT61_RS19780 PF08845 Toxin SymE, type I toxin-antitoxin system APT61_RS19800 PF01555 DNA methylase APT61_RS19815 PF04606 Ogr/Delta-like zinc finger APT61_RS19835 PF00589 Phage integrase family APT61_RS19835 PF13356 Arm DNA-binding domain APT61_RS19850 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) APT61_RS19855 PF06877 Regulator of ribonuclease activity B APT61_RS19860 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APT61_RS19860 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APT61_RS19870 PF09339 IclR helix-turn-helix domain APT61_RS19870 PF01614 Bacterial transcriptional regulator APT61_RS19875 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain APT61_RS19875 PF04616 Glycosyl hydrolases family 43 APT61_RS19885 PF00920 Dehydratase family APT61_RS19890 PF00701 Dihydrodipicolinate synthetase family APT61_RS19895 PF04074 YhcH/YjgK/YiaL APT61_RS19900 PF08052 PyrBI operon leader peptide APT61_RS19905 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APT61_RS19905 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APT61_RS19910 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain APT61_RS19910 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain APT61_RS19915 PF01042 Endoribonuclease L-PSP APT61_RS19920 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading APT61_RS19920 PF18416 N-acetylglucosamine binding protein domain 2 APT61_RS19925 PF00728 Glycosyl hydrolase family 20, catalytic domain APT61_RS19925 PF07691 PA14 domain APT61_RS19925 PF02838 Glycosyl hydrolase family 20, domain 2 APT61_RS19930 PF00689 Cation transporting ATPase, C-terminus APT61_RS19930 PF00690 Cation transporter/ATPase, N-terminus APT61_RS19935 PF00356 Bacterial regulatory proteins, lacI family APT61_RS19940 PF00367 phosphotransferase system, EIIB APT61_RS19940 PF02378 Phosphotransferase system, EIIC APT61_RS19945 PF00128 Alpha amylase, catalytic domain APT61_RS19945 PF11941 Domain of unknown function (DUF3459) APT61_RS19950 PF03477 ATP cone domain APT61_RS19950 PF13597 Anaerobic ribonucleoside-triphosphate reductase APT61_RS19960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APT61_RS19960 PF05043 Mga helix-turn-helix domain APT61_RS19960 PF08279 HTH domain APT61_RS19960 PF00874 PRD domain APT61_RS19970 PF07071 KDGP aldolase APT61_RS19975 PF03841 L-seryl-tRNA selenium transferase APT61_RS19980 PF01979 Amidohydrolase family APT61_RS20010 PF01848 Hok/gef family APT61_RS20015 PF07361 Cytochrome b562 APT61_RS20020 PF01523 Putative modulator of DNA gyrase APT61_RS20025 PF04751 Protein of unknown function (DUF615) APT61_RS20030 PF01225 Mur ligase family, catalytic domain APT61_RS20030 PF02875 Mur ligase family, glutamate ligase domain APT61_RS20030 PF08245 Mur ligase middle domain APT61_RS20035 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain APT61_RS20045 PF02203 Tar ligand binding domain homologue APT61_RS20045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APT61_RS20045 PF00672 HAMP domain APT61_RS20050 PF02653 Branched-chain amino acid transport system / permease component APT61_RS20055 PF02653 Branched-chain amino acid transport system / permease component APT61_RS20060 PF00005 ABC transporter APT61_RS20065 PF13407 Periplasmic binding protein domain APT61_RS20070 PF00719 Inorganic pyrophosphatase APT61_RS20075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APT61_RS20075 PF02203 Tar ligand binding domain homologue APT61_RS20075 PF00672 HAMP domain APT61_RS20080 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like APT61_RS20085 PF04357 TamB, inner membrane protein subunit of TAM complex APT61_RS20090 PF07244 Surface antigen variable number repeat APT61_RS20090 PF17243 POTRA domain TamA domain 1 APT61_RS20090 PF01103 Surface antigen APT61_RS20095 PF01625 Peptide methionine sulfoxide reductase APT61_RS20100 PF00571 CBS domain APT61_RS20100 PF03471 Transporter associated domain APT61_RS20100 PF01595 Cyclin M transmembrane N-terminal domain APT61_RS20105 PF06526 Protein of unknown function (DUF1107) APT61_RS20110 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) APT61_RS20115 PF00459 Inositol monophosphatase family APT61_RS20120 PF00149 Calcineurin-like phosphoesterase APT61_RS20120 PF02872 5'-nucleotidase, C-terminal domain APT61_RS20125 PF03358 NADPH-dependent FMN reductase APT61_RS20130 PF01022 Bacterial regulatory protein, arsR family APT61_RS20135 PF02040 Arsenical pump membrane protein APT61_RS20140 PF03960 ArsC family APT61_RS20165 PF00892 EamA-like transporter family APT61_RS20170 PF01638 HxlR-like helix-turn-helix APT61_RS20175 PF05368 NmrA-like family APT61_RS20180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APT61_RS20180 PF00672 HAMP domain APT61_RS20180 PF02203 Tar ligand binding domain homologue APT61_RS20185 PF04405 Domain of Unknown function (DUF542) APT61_RS20185 PF01814 Hemerythrin HHE cation binding domain APT61_RS20190 PF00324 Amino acid permease APT61_RS20195 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase APT61_RS20195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APT61_RS20200 PF04225 Opacity-associated protein A LysM-like domain APT61_RS20200 PF08525 Opacity-associated protein A N-terminal motif APT61_RS20210 PF01281 Ribosomal protein L9, N-terminal domain APT61_RS20210 PF03948 Ribosomal protein L9, C-terminal domain APT61_RS20215 PF01084 Ribosomal protein S18 APT61_RS20220 PF00436 Single-strand binding protein family APT61_RS20225 PF01250 Ribosomal protein S6 APT61_RS20230 PF07338 Protein of unknown function (DUF1471) APT61_RS20235 PF00596 Class II Aldolase and Adducin N-terminal domain APT61_RS20240 PF01261 Xylose isomerase-like TIM barrel APT61_RS20245 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family APT61_RS20250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APT61_RS20255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APT61_RS20260 PF03611 PTS system sugar-specific permease component APT61_RS20270 PF00455 DeoR C terminal sensor domain APT61_RS20270 PF08220 DeoR-like helix-turn-helix domain APT61_RS20275 PF00326 Prolyl oligopeptidase family APT61_RS20280 PF07338 Protein of unknown function (DUF1471) APT61_RS20285 PF07338 Protein of unknown function (DUF1471) APT61_RS20290 PF00672 HAMP domain APT61_RS20290 PF02203 Tar ligand binding domain homologue APT61_RS20290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain APT61_RS20295 PF02770 Acyl-CoA dehydrogenase, middle domain APT61_RS20295 PF18158 Adaptive response protein AidB N-terminal domain APT61_RS20295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APT61_RS20300 PF08946 Osmosensory transporter coiled coil APT61_RS20300 PF00083 Sugar (and other) transporter APT61_RS20305 PF08032 RNA 2'-O ribose methyltransferase substrate binding APT61_RS20305 PF00588 SpoU rRNA Methylase family APT61_RS20310 PF00575 S1 RNA binding domain APT61_RS20310 PF08206 Ribonuclease B OB domain APT61_RS20310 PF08461 Ribonuclease R winged-helix domain APT61_RS20310 PF17876 Cold shock domain APT61_RS20310 PF00773 RNB domain APT61_RS20315 PF02082 Transcriptional regulator APT61_RS20320 PF00709 Adenylosuccinate synthetase APT61_RS20325 PF01145 SPFH domain / Band 7 family APT61_RS20330 PF12221 Bacterial membrane protein N terminal APT61_RS20330 PF01145 SPFH domain / Band 7 family APT61_RS20335 PF16360 GTP-binding GTPase Middle Region APT61_RS20335 PF13167 GTP-binding GTPase N-terminal APT61_RS20335 PF01926 50S ribosome-binding GTPase APT61_RS20340 PF17209 Hfq protein APT61_RS20350 PF01119 DNA mismatch repair protein, C-terminal domain APT61_RS20350 PF08676 MutL C terminal dimerisation domain APT61_RS20355 PF01520 N-acetylmuramoyl-L-alanine amidase APT61_RS20360 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE APT61_RS20365 PF03853 YjeF-related protein N-terminus APT61_RS20365 PF01256 Carbohydrate kinase APT61_RS20370 PF08331 Domain of unknown function (DUF1730) APT61_RS20390 PF00929 Exonuclease APT61_RS20395 PF03193 RsgA GTPase APT61_RS20400 PF02666 Phosphatidylserine decarboxylase APT61_RS20405 PF00924 Mechanosensitive ion channel APT61_RS20405 PF12795 Mechanosensitive ion channel porin domain APT61_RS20405 PF12794 Mechanosensitive ion channel inner membrane domain 1 APT61_RS20410 PF10840 Protein of unknown function (DUF2645) APT61_RS20415 PF13520 Amino acid permease APT61_RS20420 PF00152 tRNA synthetases class II (D, K and N) APT61_RS20425 PF02910 Fumarate reductase flavoprotein C-term APT61_RS20425 PF00890 FAD binding domain APT61_RS20430 PF13183 4Fe-4S dicluster domain APT61_RS20430 PF13085 2Fe-2S iron-sulfur cluster binding domain APT61_RS20435 PF02300 Fumarate reductase subunit C APT61_RS20440 PF02313 Fumarate reductase subunit D APT61_RS20445 PF08212 Lipocalin-like domain APT61_RS20450 PF00893 Small Multidrug Resistance protein APT61_RS20455 PF00196 Bacterial regulatory proteins, luxR family APT61_RS20460 PF08085 Entericidin EcnA/B family APT61_RS20465 PF08085 Entericidin EcnA/B family APT61_RS20470 PF09285 Elongation factor P, C-terminal APT61_RS20470 PF01132 Elongation factor P (EF-P) OB domain APT61_RS20470 PF08207 Elongation factor P (EF-P) KOW-like domain APT61_RS20475 PF04055 Radical SAM superfamily APT61_RS20480 PF13698 Domain of unknown function (DUF4156) APT61_RS20485 PF00118 TCP-1/cpn60 chaperonin family APT61_RS20490 PF00166 Chaperonin 10 Kd subunit APT61_RS20495 PF13520 Amino acid permease APT61_RS20500 PF04186 FxsA cytoplasmic membrane protein APT61_RS20505 PF10415 Fumarase C C-terminus APT61_RS20505 PF00206 Lyase APT61_RS20510 PF03605 Anaerobic c4-dicarboxylate membrane transporter APT61_RS20515 PF03091 CutA1 divalent ion tolerance protein APT61_RS20520 PF11412 Disulphide bond corrector protein DsbC APT61_RS20520 PF02683 Cytochrome C biogenesis protein transmembrane region APT61_RS20560 PF16363 GDP-mannose 4,6 dehydratase APT61_RS20570 PF13439 Glycosyltransferase Family 4 APT61_RS20570 PF00534 Glycosyl transferases group 1 APT61_RS20600 PF02563 Polysaccharide biosynthesis/export protein APT61_RS20610 PF02397 Bacterial sugar transferase APT61_RS20615 PF08946 Osmosensory transporter coiled coil APT61_RS20615 PF00083 Sugar (and other) transporter APT61_RS20620 PF03812 2-keto-3-deoxygluconate permease APT61_RS20625 PF13990 YjcZ-like protein APT61_RS20630 PF00350 Dynamin family APT61_RS20635 PF03831 PhnA domain APT61_RS20635 PF08274 PhnA Zinc-Ribbon APT61_RS20640 PF06983 3-demethylubiquinone-9 3-methyltransferase APT61_RS20645 PF00005 ABC transporter APT61_RS20655 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS20660 PF00392 Bacterial regulatory proteins, gntR family APT61_RS20660 PF07702 UTRA domain APT61_RS20665 PF06754 Phosphonate metabolism protein PhnG APT61_RS20670 PF05845 Bacterial phosphonate metabolism protein (PhnH) APT61_RS20675 PF05861 Bacterial phosphonate metabolism protein (PhnI) APT61_RS20680 PF06007 Phosphonate metabolism protein PhnJ APT61_RS20685 PF00005 ABC transporter APT61_RS20690 PF00005 ABC transporter APT61_RS20695 PF07969 Amidohydrolase family APT61_RS20705 PF00583 Acetyltransferase (GNAT) family APT61_RS20710 PF12706 Beta-lactamase superfamily domain APT61_RS20720 PF08448 PAS fold APT61_RS20720 PF13188 PAS domain APT61_RS20720 PF00072 Response regulator receiver domain APT61_RS20720 PF00512 His Kinase A (phospho-acceptor) domain APT61_RS20720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS20725 PF00005 ABC transporter APT61_RS20730 PF02653 Branched-chain amino acid transport system / permease component APT61_RS20735 PF13407 Periplasmic binding protein domain APT61_RS20745 PF01116 Fructose-bisphosphate aldolase class-II APT61_RS20755 PF00072 Response regulator receiver domain APT61_RS20755 PF00486 Transcriptional regulatory protein, C terminal APT61_RS20760 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APT61_RS20760 PF00384 Molybdopterin oxidoreductase APT61_RS20760 PF01568 Molydopterin dinucleotide binding domain APT61_RS20765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APT61_RS20765 PF00384 Molybdopterin oxidoreductase APT61_RS20765 PF01568 Molydopterin dinucleotide binding domain APT61_RS20770 PF08238 Sel1 repeat APT61_RS20775 PF00375 Sodium:dicarboxylate symporter family APT61_RS20780 PF16177 Acetyl-coenzyme A synthetase N-terminus APT61_RS20780 PF00501 AMP-binding enzyme APT61_RS20780 PF13193 AMP-binding enzyme C-terminal domain APT61_RS20785 PF04341 Protein of unknown function, DUF485 APT61_RS20790 PF00474 Sodium:solute symporter family APT61_RS20800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APT61_RS20800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APT61_RS20810 PF04172 LrgB-like family APT61_RS20815 PF03788 LrgA family APT61_RS20820 PF03466 LysR substrate binding domain APT61_RS20820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS20825 PF00999 Sodium/hydrogen exchanger family APT61_RS20830 PF00860 Permease family APT61_RS20835 PF00043 Glutathione S-transferase, C-terminal domain APT61_RS20835 PF02798 Glutathione S-transferase, N-terminal domain APT61_RS20840 PF09278 MerR, DNA binding APT61_RS20840 PF00376 MerR family regulatory protein APT61_RS20845 PF12833 Helix-turn-helix domain APT61_RS20850 PF12792 CSS motif domain associated with EAL APT61_RS20850 PF00563 EAL domain APT61_RS20855 PF00990 Diguanylate cyclase, GGDEF domain APT61_RS20860 PF15940 Family of unknown function APT61_RS20865 PF00436 Single-strand binding protein family APT61_RS20870 PF00005 ABC transporter APT61_RS20870 PF17760 UvrA interaction domain APT61_RS20870 PF17755 UvrA DNA-binding domain APT61_RS20875 PF04237 YjbR APT61_RS20880 PF01894 Uncharacterised protein family UPF0047 APT61_RS20885 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) APT61_RS20890 PF00155 Aminotransferase class I and II APT61_RS20895 PF00842 Alanine racemase, C-terminal domain APT61_RS20895 PF01168 Alanine racemase, N-terminal domain APT61_RS20900 PF03796 DnaB-like helicase C terminal domain APT61_RS20900 PF00772 DnaB-like helicase N terminal domain APT61_RS20905 PF08240 Alcohol dehydrogenase GroES-like domain APT61_RS20905 PF00107 Zinc-binding dehydrogenase APT61_RS20910 PF09583 Phage shock protein G (Phageshock_PspG) APT61_RS20915 PF01207 Dihydrouridine synthase (Dus) APT61_RS20930 PF01475 Ferric uptake regulator family APT61_RS20935 PF05532 CsbD-like APT61_RS20940 PF01554 MatE APT61_RS20945 PF01726 LexA DNA binding domain APT61_RS20945 PF00717 Peptidase S24-like APT61_RS20950 PF01219 Prokaryotic diacylglycerol kinase APT61_RS20955 PF01553 Acyltransferase APT61_RS20960 PF01040 UbiA prenyltransferase family APT61_RS20965 PF04345 Chorismate lyase APT61_RS20970 PF07148 Maltose operon periplasmic protein precursor (MalM) APT61_RS20975 PF02264 LamB porin APT61_RS20980 PF17912 MalK OB fold domain APT61_RS20980 PF00005 ABC transporter APT61_RS20985 PF01547 Bacterial extracellular solute-binding protein APT61_RS20990 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS20990 PF14785 Maltose transport system permease protein MalF P2 domain APT61_RS20995 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS21000 PF06146 Phosphate-starvation-inducible E APT61_RS21005 PF00342 Phosphoglucose isomerase APT61_RS21010 PF01842 ACT domain APT61_RS21010 PF00696 Amino acid kinase family APT61_RS21015 PF10127 RNA repair pathway DNA polymerase beta family APT61_RS21020 PF01139 tRNA-splicing ligase RtcB APT61_RS21025 PF06956 Regulator of RNA terminal phosphate cyclase APT61_RS21025 PF00158 Sigma-54 interaction domain APT61_RS21030 PF01758 Sodium Bile acid symporter family APT61_RS21035 PF11656 YjbD family (DUF3811) APT61_RS21040 PF01479 S4 domain APT61_RS21040 PF00849 RNA pseudouridylate synthase APT61_RS21045 PF02690 Na+/Pi-cotransporter APT61_RS21050 PF02965 Vitamin B12 dependent methionine synthase, activation domain APT61_RS21050 PF02607 B12 binding domain APT61_RS21050 PF02310 B12 binding domain APT61_RS21050 PF02574 Homocysteine S-methyltransferase APT61_RS21050 PF00809 Pterin binding enzyme APT61_RS21055 PF09339 IclR helix-turn-helix domain APT61_RS21055 PF01614 Bacterial transcriptional regulator APT61_RS21065 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) APT61_RS21070 PF00463 Isocitrate lyase family APT61_RS21075 PF01274 Malate synthase APT61_RS21080 PF04204 Homoserine O-succinyltransferase APT61_RS21105 PF01808 AICARFT/IMPCHase bienzyme APT61_RS21105 PF02142 MGS-like domain APT61_RS21110 PF02844 Phosphoribosylglycinamide synthetase, N domain APT61_RS21110 PF02843 Phosphoribosylglycinamide synthetase, C domain APT61_RS21110 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain APT61_RS21115 PF07356 Protein of unknown function (DUF1481) APT61_RS21120 PF00216 Bacterial DNA-binding protein APT61_RS21125 PF04222 Protein of unknown function (DUF416) APT61_RS21130 PF04493 Endonuclease V APT61_RS21135 PF01208 Uroporphyrinogen decarboxylase (URO-D) APT61_RS21140 PF09297 NADH pyrophosphatase zinc ribbon domain APT61_RS21140 PF00293 NUDIX domain APT61_RS21145 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ APT61_RS21150 PF13667 ThiC-associated domain APT61_RS21150 PF01964 Radical SAM ThiC family APT61_RS21155 PF02581 Thiamine monophosphate synthase APT61_RS21160 PF00899 ThiF family APT61_RS21165 PF02597 ThiS family APT61_RS21170 PF05690 Thiazole biosynthesis protein ThiG APT61_RS21175 PF06968 Biotin and Thiamin Synthesis associated domain APT61_RS21175 PF04055 Radical SAM superfamily APT61_RS21180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APT61_RS21185 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit APT61_RS21190 PF04997 RNA polymerase Rpb1, domain 1 APT61_RS21190 PF00623 RNA polymerase Rpb1, domain 2 APT61_RS21190 PF04983 RNA polymerase Rpb1, domain 3 APT61_RS21190 PF05000 RNA polymerase Rpb1, domain 4 APT61_RS21190 PF04998 RNA polymerase Rpb1, domain 5 APT61_RS21195 PF10385 RNA polymerase beta subunit external 1 domain APT61_RS21195 PF00562 RNA polymerase Rpb2, domain 6 APT61_RS21195 PF04561 RNA polymerase Rpb2, domain 2 APT61_RS21195 PF04560 RNA polymerase Rpb2, domain 7 APT61_RS21195 PF04563 RNA polymerase beta subunit APT61_RS21195 PF04565 RNA polymerase Rpb2, domain 3 APT61_RS21200 PF00542 Ribosomal protein L7/L12 C-terminal domain APT61_RS21200 PF16320 Ribosomal protein L7/L12 dimerisation domain APT61_RS21205 PF00466 Ribosomal protein L10 APT61_RS21210 PF00687 Ribosomal protein L1p/L10e family APT61_RS21215 PF03946 Ribosomal protein L11, N-terminal domain APT61_RS21215 PF00298 Ribosomal protein L11, RNA binding domain APT61_RS21220 PF02357 Transcription termination factor nusG APT61_RS21220 PF00467 KOW motif APT61_RS21225 PF00584 SecE/Sec61-gamma subunits of protein translocation complex APT61_RS21230 PF03144 Elongation factor Tu domain 2 APT61_RS21230 PF00009 Elongation factor Tu GTP binding domain APT61_RS21230 PF03143 Elongation factor Tu C-terminal domain APT61_RS21255 PF00485 Phosphoribulokinase / Uridine kinase family APT61_RS21260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APT61_RS21260 PF00005 ABC transporter APT61_RS21265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APT61_RS21265 PF00005 ABC transporter APT61_RS21270 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS21270 PF12911 N-terminal TM domain of oligopeptide transport permease C APT61_RS21275 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS21280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APT61_RS21300 PF00884 Sulfatase APT61_RS21300 PF08019 Phosphoethanolamine transferase EptA/EptB APT61_RS21305 PF07690 Major Facilitator Superfamily APT61_RS21310 PF03797 Autotransporter beta-domain APT61_RS21315 PF03352 Methyladenine glycosylase APT61_RS21320 PF00583 Acetyltransferase (GNAT) family APT61_RS21325 PF01568 Molydopterin dinucleotide binding domain APT61_RS21325 PF00384 Molybdopterin oxidoreductase APT61_RS21325 PF18364 Molybdopterin oxidoreductase N-terminal domain APT61_RS21330 PF00691 OmpA family APT61_RS21330 PF13488 Glycine zipper APT61_RS21335 PF00356 Bacterial regulatory proteins, lacI family APT61_RS21345 PF00294 pfkB family carbohydrate kinase APT61_RS21350 PF07690 Major Facilitator Superfamily APT61_RS21355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APT61_RS21355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APT61_RS21360 PF00313 'Cold-shock' DNA-binding domain APT61_RS21365 PF11254 Protein of unknown function (DUF3053) APT61_RS21370 PF01381 Helix-turn-helix APT61_RS21375 PF00005 ABC transporter APT61_RS21375 PF12848 ABC transporter APT61_RS21380 PF02092 Glycyl-tRNA synthetase beta subunit APT61_RS21380 PF05746 DALR anticodon binding domain APT61_RS21385 PF02091 Glycyl-tRNA synthetase alpha subunit APT61_RS21390 PF13983 YsaB-like lipoprotein APT61_RS21395 PF01757 Acyltransferase family APT61_RS21400 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APT61_RS21400 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APT61_RS21410 PF13407 Periplasmic binding protein domain APT61_RS21415 PF00005 ABC transporter APT61_RS21420 PF02653 Branched-chain amino acid transport system / permease component APT61_RS21425 PF12833 Helix-turn-helix domain APT61_RS21430 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase APT61_RS21435 PF00128 Alpha amylase, catalytic domain APT61_RS21440 PF00155 Aminotransferase class I and II APT61_RS21445 PF13247 4Fe-4S dicluster domain APT61_RS21460 PF07944 Beta-L-arabinofuranosidase, GH127 APT61_RS21465 PF06629 MltA-interacting protein MipA APT61_RS21470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS21470 PF03466 LysR substrate binding domain APT61_RS21475 PF00171 Aldehyde dehydrogenase family APT61_RS21480 PF00480 ROK family APT61_RS21485 PF09107 Elongation factor SelB, winged helix APT61_RS21485 PF09106 Elongation factor SelB, winged helix APT61_RS21485 PF03144 Elongation factor Tu domain 2 APT61_RS21485 PF00009 Elongation factor Tu GTP binding domain APT61_RS21490 PF03841 L-seryl-tRNA selenium transferase APT61_RS21490 PF12390 Selenocysteine synthase N terminal APT61_RS21495 PF00043 Glutathione S-transferase, C-terminal domain APT61_RS21495 PF13417 Glutathione S-transferase, N-terminal domain APT61_RS21500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APT61_RS21500 PF00529 HlyD membrane-fusion protein of T1SS APT61_RS21505 PF11742 Protein of unknown function (DUF3302) APT61_RS21510 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APT61_RS21510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 APT61_RS21510 PF02378 Phosphotransferase system, EIIC APT61_RS21515 PF08125 Mannitol dehydrogenase C-terminal domain APT61_RS21515 PF01232 Mannitol dehydrogenase Rossmann domain APT61_RS21520 PF05068 Mannitol repressor APT61_RS21525 PF10928 Protein of unknown function (DUF2810) APT61_RS21530 PF02652 L-lactate permease APT61_RS21535 PF07729 FCD domain APT61_RS21535 PF00392 Bacterial regulatory proteins, gntR family APT61_RS21540 PF01070 FMN-dependent dehydrogenase APT61_RS21545 PF00588 SpoU rRNA Methylase family APT61_RS21550 PF06426 Serine acetyltransferase, N-terminal APT61_RS21550 PF00132 Bacterial transferase hexapeptide (six repeats) APT61_RS21555 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus APT61_RS21555 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus APT61_RS21560 PF02556 Preprotein translocase subunit SecB APT61_RS21565 PF00462 Glutaredoxin APT61_RS21570 PF00581 Rhodanese-like domain APT61_RS21575 PF06415 BPG-independent PGAM N-terminus (iPGM_N) APT61_RS21575 PF01676 Metalloenzyme superfamily APT61_RS21580 PF01551 Peptidase family M23 APT61_RS21585 PF04748 Divergent polysaccharide deacetylase APT61_RS21590 PF00535 Glycosyl transferase family 2 APT61_RS21595 PF08240 Alcohol dehydrogenase GroES-like domain APT61_RS21595 PF00107 Zinc-binding dehydrogenase APT61_RS21600 PF00155 Aminotransferase class I and II APT61_RS21605 PF01370 NAD dependent epimerase/dehydratase family APT61_RS21610 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APT61_RS21615 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APT61_RS21620 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APT61_RS21625 PF13439 Glycosyltransferase Family 4 APT61_RS21625 PF00534 Glycosyl transferases group 1 APT61_RS21640 PF00535 Glycosyl transferase family 2 APT61_RS21655 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) APT61_RS21660 PF00535 Glycosyl transferase family 2 APT61_RS21665 PF01467 Cytidylyltransferase-like APT61_RS21670 PF06827 Zinc finger found in FPG and IleRS APT61_RS21670 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain APT61_RS21670 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain APT61_RS21675 PF00471 Ribosomal protein L33 APT61_RS21680 PF00830 Ribosomal L28 family APT61_RS21685 PF04002 RadC-like JAB domain APT61_RS21690 PF02441 Flavoprotein APT61_RS21690 PF04127 DNA / pantothenate metabolism flavoprotein APT61_RS21695 PF00692 dUTPase APT61_RS21700 PF00440 Bacterial regulatory proteins, tetR family APT61_RS21705 PF00156 Phosphoribosyl transferase domain APT61_RS21710 PF03725 3' exoribonuclease family, domain 2 APT61_RS21710 PF01138 3' exoribonuclease family, domain 1 APT61_RS21715 PF08340 Domain of unknown function (DUF1732) APT61_RS21715 PF03755 YicC-like family, N-terminal region APT61_RS21720 PF03458 UPF0126 domain APT61_RS21725 PF00884 Sulfatase APT61_RS21730 PF03120 NAD-dependent DNA ligase OB-fold domain APT61_RS21730 PF01653 NAD-dependent DNA ligase adenylation domain APT61_RS21735 PF00625 Guanylate kinase APT61_RS21740 PF01192 RNA polymerase Rpb6 APT61_RS21745 PF04607 Region found in RelA / SpoT proteins APT61_RS21745 PF13291 ACT domain APT61_RS21745 PF02824 TGS domain APT61_RS21750 PF00588 SpoU rRNA Methylase family APT61_RS21750 PF12105 SpoU, rRNA methylase, C-terminal APT61_RS21755 PF00271 Helicase conserved C-terminal domain APT61_RS21755 PF00270 DEAD/DEAH box helicase APT61_RS21755 PF17191 RecG wedge domain APT61_RS21760 PF03616 Sodium/glutamate symporter APT61_RS21765 PF00860 Permease family APT61_RS21770 PF05170 AsmA family APT61_RS21775 PF01055 Glycosyl hydrolases family 31 APT61_RS21775 PF13802 Galactose mutarotase-like APT61_RS21795 PF02463 RecF/RecN/SMC N terminal domain APT61_RS21815 PF13302 Acetyltransferase (GNAT) domain APT61_RS21815 PF00958 GMP synthase C terminal domain APT61_RS21815 PF13673 Acetyltransferase (GNAT) domain APT61_RS21815 PF00117 Glutamine amidotransferase class-I APT61_RS21815 PF03352 Methyladenine glycosylase APT61_RS21830 PF08212 Lipocalin-like domain APT61_RS21835 PF13411 MerR HTH family regulatory protein APT61_RS21840 PF00576 HIUase/Transthyretin family APT61_RS21845 PF08349 Protein of unknown function (DUF1722) APT61_RS21850 PF02463 RecF/RecN/SMC N terminal domain APT61_RS21855 PF03180 NLPA lipoprotein APT61_RS21860 PF07690 Major Facilitator Superfamily APT61_RS21865 PF08361 MAATS-type transcriptional repressor, C-terminal region APT61_RS21865 PF00440 Bacterial regulatory proteins, tetR family APT61_RS21880 PF00356 Bacterial regulatory proteins, lacI family APT61_RS21885 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit APT61_RS21890 PF02378 Phosphotransferase system, EIIC APT61_RS21895 PF00232 Glycosyl hydrolase family 1 APT61_RS21900 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit APT61_RS21905 PF02264 LamB porin APT61_RS21910 PF00892 EamA-like transporter family APT61_RS21915 PF07690 Major Facilitator Superfamily APT61_RS21920 PF06711 Protein of unknown function (DUF1198) APT61_RS21925 PF00561 alpha/beta hydrolase fold APT61_RS21935 PF07690 Major Facilitator Superfamily APT61_RS21940 PF00294 pfkB family carbohydrate kinase APT61_RS21945 PF08220 DeoR-like helix-turn-helix domain APT61_RS21945 PF00455 DeoR C terminal sensor domain APT61_RS21950 PF01842 ACT domain APT61_RS21955 PF00205 Thiamine pyrophosphate enzyme, central domain APT61_RS21955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APT61_RS21955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APT61_RS21975 PF13939 Toxin TisB, type I toxin-antitoxin system APT61_RS21985 PF07690 Major Facilitator Superfamily APT61_RS21990 PF00291 Pyridoxal-phosphate dependent enzyme APT61_RS22000 PF02656 Domain of unknown function (DUF202) APT61_RS22005 PF02656 Domain of unknown function (DUF202) APT61_RS22010 PF06826 Predicted Permease Membrane Region APT61_RS22010 PF02080 TrkA-C domain APT61_RS22015 PF00011 Hsp20/alpha crystallin family APT61_RS22020 PF00011 Hsp20/alpha crystallin family APT61_RS22025 PF07119 Protein of unknown function (DUF1375) APT61_RS22030 PF07676 WD40-like Beta Propeller Repeat APT61_RS22030 PF12566 Protein of unknown function (DUF3748) APT61_RS22040 PF07690 Major Facilitator Superfamily APT61_RS22045 PF02615 Malate/L-lactate dehydrogenase APT61_RS22050 PF08240 Alcohol dehydrogenase GroES-like domain APT61_RS22050 PF00107 Zinc-binding dehydrogenase APT61_RS22055 PF08125 Mannitol dehydrogenase C-terminal domain APT61_RS22055 PF01232 Mannitol dehydrogenase Rossmann domain APT61_RS22060 PF13378 Enolase C-terminal domain-like APT61_RS22060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APT61_RS22065 PF00392 Bacterial regulatory proteins, gntR family APT61_RS22065 PF07729 FCD domain APT61_RS22070 PF00204 DNA gyrase B APT61_RS22070 PF01751 Toprim domain APT61_RS22070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APT61_RS22070 PF18053 DNA gyrase B subunit insert domain APT61_RS22070 PF00986 DNA gyrase B subunit, carboxyl terminus APT61_RS22075 PF02463 RecF/RecN/SMC N terminal domain APT61_RS22080 PF02767 DNA polymerase III beta subunit, central domain APT61_RS22080 PF02768 DNA polymerase III beta subunit, C-terminal domain APT61_RS22080 PF00712 DNA polymerase III beta subunit, N-terminal domain APT61_RS22085 PF08299 Bacterial dnaA protein helix-turn-helix APT61_RS22085 PF00308 Bacterial dnaA protein APT61_RS22085 PF11638 DnaA N-terminal domain APT61_RS22090 PF00825 Ribonuclease P APT61_RS22095 PF14849 YidC periplasmic domain APT61_RS22095 PF02096 60Kd inner membrane protein APT61_RS22100 PF12631 MnmE helical domain APT61_RS22100 PF01926 50S ribosome-binding GTPase APT61_RS22100 PF10396 GTP-binding protein TrmE N-terminus APT61_RS22105 PF01212 Beta-eliminating lyase APT61_RS22110 PF03222 Tryptophan/tyrosine permease family APT61_RS22115 PF07690 Major Facilitator Superfamily APT61_RS22120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APT61_RS22120 PF03466 LysR substrate binding domain APT61_RS22130 PF03358 NADPH-dependent FMN reductase APT61_RS22135 PF00860 Permease family APT61_RS22140 PF13419 Haloacid dehalogenase-like hydrolase APT61_RS22145 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APT61_RS22145 PF00756 Putative esterase APT61_RS22150 PF11471 Maltoporin periplasmic N-terminal extension APT61_RS22150 PF02264 LamB porin APT61_RS22155 PF01895 PhoU domain APT61_RS22160 PF00005 ABC transporter APT61_RS22165 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS22170 PF00528 Binding-protein-dependent transport system inner membrane component APT61_RS22175 PF12849 PBP superfamily domain APT61_RS22180 PF01380 SIS domain APT61_RS22185 PF00132 Bacterial transferase hexapeptide (six repeats) APT61_RS22185 PF14602 Hexapeptide repeat of succinyl-transferase APT61_RS22185 PF12804 MobA-like NTP transferase domain APT61_RS22190 PF13229 Right handed beta helix region APT61_RS22195 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain APT61_RS22195 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain APT61_RS22200 PF02874 ATP synthase alpha/beta family, beta-barrel domain APT61_RS22200 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APT61_RS22205 PF00231 ATP synthase APT61_RS22210 PF00306 ATP synthase alpha/beta chain, C terminal domain APT61_RS22210 PF02874 ATP synthase alpha/beta family, beta-barrel domain APT61_RS22210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APT61_RS22215 PF00213 ATP synthase delta (OSCP) subunit APT61_RS22220 PF00430 ATP synthase B/B' CF(0) APT61_RS22225 PF00137 ATP synthase subunit C